Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NC_002516 6264404 bp DNA circular CON 24-JAN-2019 ACCESSION NC_002516 VERSION NC_002516.2 DBLINK BioProject: PRJNA57945 Assembly: GCF_000006765.1 KEYWORDS RefSeq. SOURCE Pseudomonas aeruginosa PAO1 ORGANISM Pseudomonas aeruginosa PAO1 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6264404) AUTHORS Winsor,G.L., Van Rossum,T., Lo,R., Khaira,B., Whiteside,M.D., Hancock,R.E. and Brinkman,F.S. TITLE Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes JOURNAL Nucleic acids Res. 37 (DATABASE ISSUE), D483-D488 (2009) PUBMED 18978025 REFERENCE 2 (bases 1 to 6264404) AUTHORS Cirz,R.T., O'Neill,B.M., Hammond,J.A., Head,S.R. and Romesberg,F.E. TITLE Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin JOURNAL J. Bacteriol. 188 (20), 7101-7110 (2006) PUBMED 17015649 REFERENCE 3 (bases 1 to 6264404) AUTHORS Palmer,K.L., Mashburn,L.M., Singh,P.K. and Whiteley,M. TITLE Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology JOURNAL J. Bacteriol. 187 (15), 5267-5277 (2005) PUBMED 16030221 REFERENCE 4 (bases 1 to 6264404) AUTHORS Salunkhe,P., Smart,C.H., Morgan,J.A., Panagea,S., Walshaw,M.J., Hart,C.A., Geffers,R., Tummler,B. and Winstanley,C. TITLE A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance JOURNAL J. Bacteriol. 187 (14), 4908-4920 (2005) PUBMED 15995206 REFERENCE 5 (bases 1 to 6264404) AUTHORS Filiatrault,M.J., Wagner,V.E., Bushnell,D., Haidaris,C.G., Iglewski,B.H. and Passador,L. TITLE Effect of anaerobiosis and nitrate on gene expression in Pseudomonas aeruginosa JOURNAL Infect. Immun. 73 (6), 3764-3772 (2005) PUBMED 15908409 REFERENCE 6 (bases 1 to 6264404) AUTHORS Rasmussen,T.B., Bjarnsholt,T., Skindersoe,M.E., Hentzer,M., Kristoffersen,P., Kote,M., Nielsen,J., Eberl,L. and Givskov,M. TITLE Screening for quorum-sensing inhibitors (QSI) by use of a novel genetic system, the QSI selector JOURNAL J. Bacteriol. 187 (5), 1799-1814 (2005) PUBMED 15716452 REFERENCE 7 (bases 1 to 6264404) AUTHORS Winsor,G.L., Lo,R., Sui,S.J., Ung,K.S., Huang,S., Cheng,D., Ching,W.K., Hancock,R.E. and Brinkman,F.S. TITLE Pseudomonas aeruginosa Genome Database and PseudoCap: facilitating community-based, continually updated, genome annotation JOURNAL Nucleic acids Res. 33 (DATABASE ISSUE), D338-D343 (2005) PUBMED 15608211 REFERENCE 8 (bases 1 to 6264404) AUTHORS Wagner,V.E., Bushnell,D., Passador,L., Brooks,A.I. and Iglewski,B.H. TITLE Microarray analysis of Pseudomonas aeruginosa quorum-sensing regulons: effects of growth phase and environment JOURNAL J. Bacteriol. 185 (7), 2080-2095 (2003) PUBMED 12644477 REFERENCE 9 (bases 1 to 6264404) AUTHORS Schuster,M., Lostroh,C.P., Ogi,T. and Greenberg,E.P. TITLE Identification, timing, and signal specificity of Pseudomonas aeruginosa quorum-controlled genes: a transcriptome analysis JOURNAL J. Bacteriol. 185 (7), 2066-2079 (2003) PUBMED 12644476 REFERENCE 10 (bases 1 to 6264404) AUTHORS Stover,C.K., Pham,X.Q., Erwin,A.L., Mizoguchi,S.D., Warrener,P., Hickey,M.J., Brinkman,F.S., Hufnagle,W.O., Kowalik,D.J., Lagrou,M., Garber,R.L., Goltry,L., Tolentino,E., Westbrock-Wadman,S., Yuan,Y., Brody,L.L., Coulter,S.N., Folger,K.R., Kas,A., Larbig,K., Lim,R., Smith,K., Spencer,D., Wong,G.K., Wu,Z., Paulsen,I.T., Reizer,J., Saier,M.H., Hancock,R.E., Lory,S. and Olson,M.V. TITLE Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen JOURNAL Nature 406 (6799), 959-964 (2000) PUBMED 10984043 REFERENCE 11 (bases 1 to 6264404) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (06-OCT-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 12 (bases 1 to 6264404) AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (08-SEP-2010) Department of Molecular Biology and Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REMARK protein update by submitter REFERENCE 13 (bases 1 to 6264404) AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (02-OCT-2008) Department of Molecular Biology and Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REMARK protein update by submitter REFERENCE 14 (bases 1 to 6264404) AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (05-JUL-2006) Department of Molecular Biology and Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REMARK Sequence update by submitter REFERENCE 15 (bases 1 to 6264404) AUTHORS Ung,K.S., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (04-FEB-2003) Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REFERENCE 16 (bases 1 to 6264404) AUTHORS Stover,C.K., Pham,X.-Q.T., Erwin,A.L., Mizoguchi,S.D., Warrener,P., Hickey,M.J., Brinkman,F.S.L., Hufnagle,W.O., Kowalik,D.J., Lagrou,M., Garber,R.L., Goltry,L., Tolentino,E., Westbrock-Wadman,S., Yuan,Y., Brody,L.L., Coulter,S.N., Folger,K.R., Kas,A., Larbig,K., Lim,R.M., Smith,K.A., Spencer,D.H., Wong,G.K.-S., Wu,Z., Paulsen,I.T., Reizer,J., Saier,M.H., Hancock,R.E.W., Lory,S. and Olson,M.V. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (16-MAY-2000) Department of Medicine and Genetics, University of Washington Genome Center, University Of Washington, Box 352145, Seattle, WA 98195, USA COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence is identical to AE004091. On Jul 24, 2006 this sequence version replaced NC_002516.1. RefSeq Category: Reference Genome FGS: First Genome sequenced MOD: Model Organism UPR: UniProt Genome ----------------------------------------------------------------- This represents the Sept 08, 2010 version of the continually updated, reviewed, Pseudomonas aeruginosa PAO1 genome annotation from PseudoCap (see http://www.pseudomonas.com for the latest updates and links to alternate annotations). This update includes updated base pair coordinates and new features. PseudoCap is coordinated by Fiona S.L. Brinkman (Simon Fraser University, Canada) and Robert E.W. Hancock (University of British Columbia, Canada) with database development by Geoff Winsor (Simon Fraser University). We welcome submission through www.pseudomonas.com of any proposed changes. 'protein name confidence' is used to rate our confidence of the accuracy of the protein name. class 1: Function experimentally demonstrated in P. aeruginosa. class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in, if known). class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene. class 4: Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences. ------------------------------------------------------------------. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..6264404 /organism="Pseudomonas aeruginosa PAO1" /mol_type="genomic DNA" /strain="PAO1" /db_xref="taxon:208964" gene 483..2027 /gene="dnaA" /locus_tag="PA0001" /db_xref="GeneID:878417" CDS 483..2027 /gene="dnaA" /locus_tag="PA0001" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="chromosome replication initiator DnaA" /protein_id="NP_064721.1" /db_xref="GeneID:878417" /translation="MSVELWQQCVDLLRDELPSQQFNTWIRPLQVEAEGDELRVYAPN RFVLDWVNEKYLGRLLELLGERGEGQLPALSLLIGSKRSRTPRAAIVPSQTHVAPPPP VAPPPAPVQPVSAAPVVVPREELPPVTTAPSVSSDPYEPEEPSIDPLAAAMPAGAAPA VRTERNVQVEGALKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNLKHGYNPLFLY GGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSV DALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFG WGLTVAVEPPELETRVAILMKKAEQAKIELPHDAAFFIAQRIRSNVRELEGALKRVIA HSHFMGRPITIELIRESLKDLLALQDKLVSIDNIQRTVAEYYKIKISDLLSKRRSRSV ARPRQVAMALSKELTNHSLPEIGVAFGGRDHTTVLHACRKIAQLRESDADIREDYKNL LRTLTT" misc_feature 483..2018 /gene="dnaA" /locus_tag="PA0001" /note="chromosomal replication initiator protein DnaA; Region: dnaA; PRK00149" /db_xref="CDD:234667" gene 2056..3159 /gene="dnaN" /locus_tag="PA0002" /db_xref="GeneID:879244" CDS 2056..3159 /gene="dnaN" /locus_tag="PA0002" /EC_number="2.7.7.7" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit beta" /protein_id="NP_064722.1" /db_xref="GeneID:879244" /translation="MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSL TGTDLEVELVGRVVLEDAAEPGEITVPARKLMDICKSLPNDVLIDIRVEEQKLLVKAG RSRFTLSTLPANDFPTVEEGPGSLNFSIAQSKLRRLIDRTSFAMAQQDVRYYLNGMLL EVNGGTLRSVATDGHRLAMCSLDAQIPSQDRHQVIVPRKGILELARLLTEQDGEVGIV LGQHHIRATTGEFTFTSKLVDGKFPDYERVLPRGGDKLVVGDRQQLREAFSRTAILSN EKYRGIRLQLSNGLLKIQANNPEQEEAEEEVQVEYNGGNLEIGFNVSYLLDVLGVIGT EQVRFILSDSNSSALVHEADNDDSAYVVMPMRL" misc_feature 2056..3156 /gene="dnaN" /locus_tag="PA0002" /note="DNA polymerase III subunit beta; Validated; Region: PRK05643" /db_xref="CDD:235541" misc_feature order(2125..2127,2272..2274,2293..2295,2650..2652) /gene="dnaN" /locus_tag="PA0002" /note="putative DNA binding surface [nucleotide binding]; other site" /db_xref="CDD:238082" misc_feature order(2275..2277,2284..2286,2362..2364,2368..2370, 2872..2874,2965..2970) /gene="dnaN" /locus_tag="PA0002" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238082" misc_feature order(2569..2571,2575..2586,3016..3018,3142..3153) /gene="dnaN" /locus_tag="PA0002" /note="beta-clamp/clamp loader binding surface [active]" /db_xref="CDD:238082" misc_feature order(2569..2571,2575..2580,2797..2799,2902..2904, 2941..2946,3025..3027,3142..3153) /gene="dnaN" /locus_tag="PA0002" /note="beta-clamp/translesion DNA polymerase binding surface [active]" /db_xref="CDD:238082" gene 3169..4278 /gene="recF" /locus_tag="PA0003" /db_xref="GeneID:879229" CDS 3169..4278 /gene="recF" /locus_tag="PA0003" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA replication and repair protein RecF" /protein_id="NP_064723.1" /db_xref="GeneID:879229" /translation="MSLTRVSVTAVRNLHPVTLSPSPRINILYGDNGSGKTSVLEAIH LLGLARSFRSARLQPVIQYEEAACTVFGQVMLANGIASNLGISRERQGEFTIRIDGQN ARSAAQLAETLPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFLPVWQRLQKALR QRNSWLRHGKLDPASQAAWDRELSLASDEIDAYRRSYIQALKPVFEETLAELVSLDDL TLSYYRGWDKDRDLLEVLASSLLRDQQMGHTQAGPQRADLRIRLAGHNAAEILSRGQQ KLVVCALRIAQGHLINRAKRGQCVYLVDDLPSELDEQHRMALCRLLEDLGCQVFITCV DPQLLKDGWRTDTPVSMFHVEHGKVSQTTTIGSEA" misc_feature 3169..4251 /gene="recF" /locus_tag="PA0003" /note="recombination protein F; Reviewed; Region: recF; PRK00064" /db_xref="CDD:234608" gene 4275..6695 /gene="gyrB" /locus_tag="PA0004" /db_xref="GeneID:879230" CDS 4275..6695 /gene="gyrB" /locus_tag="PA0004" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit B" /protein_id="NP_064724.1" /db_xref="GeneID:879230" /translation="MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFE VVDNSIDEALAGYCSEISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHA GGKFDDNTYKVSGGLHGVGVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVG ETDGSGTEVHFKPSPETFSNIHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFK YEGGLKAFVEYLNTNKTAVNEVFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIP QRDGGTHLAGFRSALTRNLNNYIEAEGLAKKFKIATTGDDAREGLTAIISVKVPDPKF SSQTKDKLVSSEVKTAVEQEMGKYFADFLLENPNEAKAVVGKMIDAARAREAARKARE MTRRKGALDIAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRRTQAILPLKG KILNVEKARFDKMLSSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHI RTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRGKQEQYIKDDQAMEEYMTQSALEDA SLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLSRLYPQELTEHFIYLPTVSVDDLAN ESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHLWLPEVELVAHGLSSYVTFNRD FFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISAFKDGLDWLMAEGTKRHSIQR YKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIESNA LAVSNLDV" misc_feature 4275..6692 /gene="gyrB" /locus_tag="PA0004" /note="DNA gyrase subunit B; Provisional; Region: gyrB; PRK14939" /db_xref="CDD:237860" gene complement(7018..7791) /gene="lptA" /locus_tag="PA0005" /db_xref="GeneID:877576" CDS complement(7018..7791) /gene="lptA" /locus_tag="PA0005" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="lysophosphatidic acid acyltransferase" /protein_id="NP_064725.1" /db_xref="GeneID:877576" /translation="MSTVQAIRTVLFYLLLSASAFVWGTLSFFIAPILPFRARYRFVV QNWCRFAIWLTRVVAGIRYEVRGLENIPEKPCVILSKHQSTWETFFLSGFFEPLSQVL KRELLYVPFFGWALALLKPIAIDRSQPKLALKQLAKQGDECLKKGAWVLIFPEGTRIP VGQMGKFSRGGTALAVNAGLPVLPIAHNAGQYWPKAGWAKYPGTIQVVIGPAMHAEGE GPRAIAELNQRAEAWVSETMAEISPIQQRVSHPEPSVVS" misc_feature complement(7069..7704) /gene="lptA" /locus_tag="PA0005" /note="1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]; Region: PlsC; COG0204" /db_xref="CDD:439974" gene complement(7803..8339) /locus_tag="PA0006" /db_xref="GeneID:879245" CDS complement(7803..8339) /locus_tag="PA0006" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase" /protein_id="NP_064726.1" /db_xref="GeneID:879245" /translation="MSRSLLILDRDGVINLDSDDYIKTLDEWIPIPSSIEAIARLSQA GWTVAVATNQSGIARGYYDLAVLEAMHARLRELVAEQGGEVGLIVYCPHGPDDGCDCR KPKPGMLRQIGEHYGVDLSGIWFVGDSIGDLEAARAVDCQPVLVKTGKGVRTLGKPLP EGTLIFDDLAAVASALLQ" misc_feature complement(7806..8339) /locus_tag="PA0006" /note="D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase; Region: PRK08942" /db_xref="CDD:236354" gene 8671..10377 /locus_tag="PA0007" /db_xref="GeneID:877575" CDS 8671..10377 /locus_tag="PA0007" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_064727.1" /db_xref="GeneID:877575" /translation="MKRLKKTLHLSSLSLASLALSSAALAAAPVMLDQGKEWTESHRQ DFYSRDQGSQVMPLPWLKALRQPDGTPFLADSLARYGYLPNPKAPAEGLPVGFTVAGT GARQMVGMTCSACHTRQIEVKGTAYRIDGGPAIVDFQAFLADLDRAVGPLTSDDAAFD AFAKPILGANPPPGARDALLAAVKEWYEPYHTLIERALPKDTWGPARLDAVSMIFNRL TGLDIGTAPPYLIPDNIKAADAPVRYPFLWNAARQNKTQWPGFAANGNDLLGLARNVG EVYGVFATFHPQKSKFHLLGMDYLKINSANFHGLGKLEDLIKKIGPPKWPWAVDKHLA RKGALIFARKTDEGGCVECHGIRIKDLVLWDTPLRDVGSDSRQHAILDGQVQTGVMEG ARMPFGQPLKATDGAFDVLAVAVAGSILQHFVPILGEKHDAKAAAVKPESVMTDETRQ LLTAFQKPVRTQADPYPYESRVLQGIWAAAPYLHNGSVPTLEELLKPAAERVESFPVG SAYDVDKVGLAAQQTQFGSYVLKTTGCEQRDSGNSRCGHEYGTSLSAEEKRALLEYLK VL" misc_feature 8782..10371 /locus_tag="PA0007" /note="di-heme-cytochrome C peroxidase; Region: CytoC_perox; NF040606" /db_xref="CDD:468579" gene complement(10434..12488) /gene="glyS" /locus_tag="PA0008" /db_xref="GeneID:878214" CDS complement(10434..12488) /gene="glyS" /locus_tag="PA0008" /EC_number="6.1.1.14" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycine--tRNA ligase subunit beta" /protein_id="NP_064728.1" /db_xref="GeneID:878214" /translation="MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLSYAA ARFYAAPRRLAVLVEQLAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVDL QQIDKSGPKLRFIQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARREEFVRPTQWL VMLFGDDVVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERR ELIAKRVAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTM QDNQKYFCLLDANGKLLPRFITVANVESKAPENIVSGNEKVVRPRLTDAEFFFKQDKK QPLESFNERLRNVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNASRAGILSKCDL ATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPSTLTGAAVAVA DKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNAAVEQYGD KVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQAVQAFR QLPEAEALAAANKRVSNILAKSEDEVPPNVDASLLVEAAEKALGSAVANAESEVAPLA AARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVADISL LG" misc_feature complement(10440..12485) /gene="glyS" /locus_tag="PA0008" /note="Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]; Region: GlyS; COG0751" /db_xref="CDD:440514" gene complement(12488..13435) /gene="glyQ" /locus_tag="PA0009" /db_xref="GeneID:878095" CDS complement(12488..13435) /gene="glyQ" /locus_tag="PA0009" /EC_number="6.1.1.14" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycine--tRNA ligase subunit alpha" /protein_id="NP_064729.1" /db_xref="GeneID:878095" /translation="MSQTTPAVRTFQDLILALQNYWAEQGCVVLQPYDMEVGAGTFHT ATFLRAIGPETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVLKPNPENFQELYLG SLKAIGIDPLVHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGIECYP VTGEITYGLERLAMYLQGVDSVYDLVWTDGPFGKVTYGDVFHQNEVEQSTFNFEHANV PKLFELFDFYESEANRLIALELPLPTYEMVLKASHTFNLLDARRAISVTERQRYILRV RTLARAVAQSYLQARARLGFPMATPELRDEVLAKLKEAE" misc_feature complement(12551..13408) /gene="glyQ" /locus_tag="PA0009" /note="Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]; Region: GlyQ; COG0752" /db_xref="CDD:440515" gene 13540..14091 /gene="tag" /locus_tag="PA0010" /db_xref="GeneID:878076" CDS 13540..14091 /gene="tag" /locus_tag="PA0010" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA-3-methyladenine glycosidase I" /protein_id="NP_248700.1" /db_xref="GeneID:878076" /translation="MPRCFWCNDDPLYMAYHDEEWGVPQRDPDALFELLLLEGFQAGL SWITVLKKRERYREVLFGFDVQRVAQMSDAEIDELMLDPGIIRNRAKLNAARQNAQAW LELDDPAGFLWSFVGGQPKINHFAGRAEVPAITPEAEAMSKALRKAGFNFVGPTICYA FMQASGMVMDHTQDCDRYAQLVG" misc_feature 13540..14082 /gene="tag" /locus_tag="PA0010" /note="3-methyladenine DNA glycosylase Tag [Replication, recombination and repair]; Region: Tag; COG2818" /db_xref="CDD:442066" gene 14235..15122 /locus_tag="PA0011" /db_xref="GeneID:877921" CDS 14235..15122 /locus_tag="PA0011" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="lipid A biosynthesis lauroyl acyltransferase" /protein_id="NP_248701.1" /db_xref="GeneID:877921" /translation="MEKFKGALVVGALRLFALLPWRAVQGVGAGIGWLMWKLPNRSRE VVRINLSKCFPELSETELEKLVGQSLMDIGRTLTESACAWIWPPEKSLRYIREVEGME VLEEALASGDGLVGITSHLGNWEVLNHFYCSYAKPIIFYRPPKLKAVDELLKKQRVQL GNRVAPSTPEGILSVIKEVKKGGCVGIPADPEPARTAGLFVPYLGTTALISKFVPQLL SRGKARGVFFHAVRLPDGSGYKVILEAAPADMYDKDLEVSVAAMSRELAKYVRAYPSQ YMWSMKRFKNRPDGEKKWY" misc_feature 14235..15119 /locus_tag="PA0011" /note="lysophospholipid acyltransferase; Region: PRK05645" /db_xref="CDD:135493" misc_feature order(14592..14594,14601..14603,14607..14609,14655..14666, 14805..14813) /locus_tag="PA0011" /note="putative acyl-acceptor binding pocket [active]" /db_xref="CDD:153246" gene 15207..15473 /locus_tag="PA0012" /db_xref="GeneID:877795" CDS 15207..15473 /locus_tag="PA0012" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248702.1" /db_xref="GeneID:877795" /translation="MDNQRQYPRTPLKCRIRISHPLFGELMAQTRDLSDTGVYVKHPD LTQLPTGSVVTGQVQDLPIDAPILQMEVVRVDAEGVGLRFLSEA" misc_feature 15213..15464 /locus_tag="PA0012" /note="PilZ domain; Region: PilZ; pfam07238" /db_xref="CDD:399904" gene 15620..16273 /locus_tag="PA0013" /db_xref="GeneID:877634" CDS 15620..16273 /locus_tag="PA0013" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248703.1" /db_xref="GeneID:877634" /translation="MSASSPAAWRGTLAGLIAFHIFIIIASNYLVQLPITLFGWHTTW GAFSFPFIFLATDLTVRLLGKGPARLVIARVMIPALIASYVVSVLFQEAAFRGFSALL EFNTFVARISLASFLAYVLGQILDIQVFDRLRRSRHWWTAPVASTILGNLLDTFTFFF VAFWRSDNPFMAQHWVEIATVDYGVKLSISLLLFVPLYGMLLNGILKMLPGRPQSNA" misc_feature 15620..16246 /locus_tag="PA0013" /note="7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter; Region: PRK11212" /db_xref="CDD:183041" gene complement(16335..16607) /locus_tag="PA0014" /db_xref="GeneID:879294" CDS complement(16335..16607) /locus_tag="PA0014" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248704.1" /db_xref="GeneID:879294" /translation="MSKQERSVPSYVEYPYEQAILYVHRNASANEMLESVQERLRALL GLLHALERIEVRTGLGVPIQRVAHILVTLGGDALTLLTAAHRATTS" gene complement(16900..17217) /locus_tag="PA0015" /db_xref="GeneID:879251" CDS complement(16900..17217) /locus_tag="PA0015" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248705.1" /db_xref="GeneID:879251" /translation="MMIEGLEKMLAKGVDNALLRFGLGKGYLDAGDAERAAEHLQRCV EQDPKYSAGWKLLGKARQAAGDLAGARQAWEQGLATAATHGDKQAEKEMTVFLRKLDR ART" misc_feature complement(<16960..17211) /locus_tag="PA0015" /note="Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]; Region: Spy; COG3914" /db_xref="CDD:443119" misc_feature complement(17080..17172) /locus_tag="PA0015" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(16981..17067) /locus_tag="PA0015" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" gene complement(17366..18739) /gene="trkA" /locus_tag="PA0016" /db_xref="GeneID:879255" CDS complement(17366..18739) /gene="trkA" /locus_tag="PA0016" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="potassium transporter inner membrane associated protein" /protein_id="NP_248706.1" /db_xref="GeneID:879255" /translation="MKIIILGAGQVGGTLAEHLASEANDITVVDTDGDRLRDLGDRLD IRTVQGKASFPTVLRQAGADDADMLVAVTNSDETNMVACQVAYTLFNTPTKIARVREP AYLTRTGLFDNEAIPVDVLISPEQVVTNYIKRLIEHPGALQVIDFAEGKAQLVGIKAY YGGPLVGQELRQLREHMPNVDTRVAAIYRRNRPIIPQGDTVIEADDEVFFIAAKAHIR AVMGEMRRLDDSYKRIIIAGGGNVGERLAEAIESRYQVKIIERSPLRCRHLSDTLDST IVLNGSASDRDLLLEENIGETDVFLALTNDDEANIMSSLLAKRLGASKVMTLINNPAY VDLVQGGEIDIAISPQLATIGTLLAHVRRGDIESVHSLRRGAAEAIEVVAHGDAKSSK VIGRSINEIKLPPGTTIGALVRDEEVLIAHGDTRIESGDHVLLFLVDKKYIRDVERLF QAGLTFF" misc_feature complement(17375..18739) /gene="trkA" /locus_tag="PA0016" /note="Trk system potassium transporter TrkA; Region: trkA; PRK09496" /db_xref="CDD:236541" gene complement(18767..20071) /locus_tag="PA0017" /db_xref="GeneID:879297" CDS complement(18767..20071) /locus_tag="PA0017" /codon_start=1 /transl_table=11 /product="Ribosomal RNA small subunit methyltransferase B" /protein_id="NP_248707.1" /db_xref="GeneID:879297" /translation="MNPRLAACQALAAVLAGRASLSGALPPQLDKVAPRDRGLTQELA FGAARWQPRLQALAARLLQKPFKAADTDIHALLLIGLYQLLYTRIPPHAAIGETVGCA DKLKKGWAKGVLNAVLRRAQREGETLLAEVDRDPSARLGHPRWLLKALKQAWPEQLDA LCAANNAHPPMTLRVNRRHGERDAYLAELAEAGIKARACDYSRDGIQLAAPRDVRELP GFAEGRVSVQDEAAQLAAEQLESAPGQRVLDACCAPGGKTCHLLETQPELAEVVAVDL EESRLVRVRENLQRLGLQASLVAADARATGEWWDGKPFQRILLDAPCSATGVIRRHPD IKLARKPEDIAALAHLQGELLDALWPTLEVGGVLLYATCSVMPAENSDSIAAFLARTP GARELDLPGPWGMKQPHGRQLLPQVEGHDGFYYAKLIKISAR" misc_feature complement(18779..20071) /locus_tag="PA0017" /note="16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB; Region: PRK10901" /db_xref="CDD:236790" gene complement(20068..21012) /gene="fmt" /locus_tag="PA0018" /db_xref="GeneID:879258" CDS complement(20068..21012) /gene="fmt" /locus_tag="PA0018" /EC_number="2.1.2.9" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="methionyl-tRNA formyltransferase" /protein_id="NP_248708.1" /db_xref="GeneID:879258" /translation="MSQALRIVFAGTPEFAAEHLKALLDTPHRIVAVYTQPDRPAGRG QKLMPSAVKSLALEHGLPVMQPQSLRNAEAQAELAALRADLMVVVAYGLILPQAVLDI PRLGCINSHASLLPRWRGAAPIQRAVEAGDAESGVTVMQMEAGLDTGPMLLKVSTPIS AADTGGSLHDRLAALGPKAVIEAIAGLAAGTLHGEIQDDALATYAHKLNKDEARLDWS RPAVELERQVRAFTPWPVCHTSLADAPLKVLGASLGQGSGAPGTILEASRDGLLVACG EGALRLTRLQLPGGKPLAFADLYNSRREQFAAGQVLGQ" misc_feature complement(20077..21000) /gene="fmt" /locus_tag="PA0018" /note="Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]; Region: Fmt; COG0223" /db_xref="CDD:439993" gene complement(21067..21573) /gene="def" /locus_tag="PA0019" /db_xref="GeneID:879306" CDS complement(21067..21573) /gene="def" /locus_tag="PA0019" /EC_number="3.5.1.88" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="peptide deformylase" /protein_id="NP_248709.1" /db_xref="GeneID:879306" /translation="MAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPG IGLAATQVNVHKRIVVMDLSEDKSEPRVFINPEFEPLTEDMDQYQEGCLSVPGFYENV DRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKL EKQHRQQA" misc_feature complement(21088..21573) /gene="def" /locus_tag="PA0019" /note="peptide deformylase; Reviewed; Region: def; PRK00150" /db_xref="CDD:234668" misc_feature complement(order(21160..21162,21169..21174,21295..21303, 21421..21423,21436..21444)) /gene="def" /locus_tag="PA0019" /note="active site" /db_xref="CDD:238271" misc_feature complement(order(21169..21171,21295..21297,21421..21423, 21436..21438)) /gene="def" /locus_tag="PA0019" /note="catalytic residues [active]" /db_xref="CDD:238271" misc_feature complement(order(21160..21162,21172..21174,21298..21300)) /gene="def" /locus_tag="PA0019" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238271" gene 21712..22737 /locus_tag="PA0020" /db_xref="GeneID:879309" CDS 21712..22737 /locus_tag="PA0020" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248710.1" /db_xref="GeneID:879309" /translation="MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISG KFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYVDGQPRLVLNRGESRGTIKLSPK IRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQ EVRLGDRLFPTEERAVNSTFMPGEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDG LAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKLSYALVLMASRPLSV TDRVQNP" misc_feature <21772..21942 /locus_tag="PA0020" /note="Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain [Inorganic ion transport and metabolism]; Region: XkdP; COG1652" /db_xref="CDD:441258" gene 22872..23960 /locus_tag="PA0021" /db_xref="GeneID:880730" CDS 22872..23960 /locus_tag="PA0021" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248711.1" /db_xref="GeneID:880730" /translation="MKNHSPAELEARLRLHGLPELGPMRFLRLIEAFGSASSALAAPA SAWRTLGVPAEAAAARRSPAVREAAGEALRWLEGLRRHLLMWDDPGYPALLAEVADAP PLLYVEGAPETLERPQLAMVGSRRASPAGLGTARSFARSLAQGGFAITSGLALGIDGA AHEGALEAGGATVAVLGTGLRRLYPRRHEALARRIVEGGGALVSELPLDSPPLPANFP RRNRIISGLSLGVLVVEASPASGSLITARLAAEQGREVYAIPGSIHHPGARGCHQLIR DGALLVESVGHVLEALRGWAQAEPAEAPAQPLPHPLLALLRAAPYTSEGLAAASGMTL PDVLATLSELELDGRVACEAGTWVHRSG" misc_feature 22893..23954 /locus_tag="PA0021" /note="Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake [Replication, recombination and repair]; Region: Smf; COG0758" /db_xref="CDD:440521" gene 24001..24558 /locus_tag="PA0022" /db_xref="GeneID:880711" CDS 24001..24558 /locus_tag="PA0022" /codon_start=1 /transl_table=11 /product="threonylcarbamoyl-AMP synthase" /protein_id="NP_248712.1" /db_xref="GeneID:880711" /translation="MISSFRAQCAARVVREGGVIAYPTEAVWGLGCDPWNEDAVYRLL ALKARPVEKGLIVVAANIHQLDFLLEDLPDVWLDRLAGTWPGPNTWLVPHQERLPEWV TGVHDSVAVRVTDHPLVQELCHLTGPLISTSANPAGRPAARTRLRVEQYFHDELDAIL GGALGGRRNPSLIRDLVTGQVIRPA" misc_feature 24028..24552 /locus_tag="PA0022" /note="tRNA A37 threonylcarbamoyladenosine synthetase subunit TsaC/SUA5/YrdC [Translation, ribosomal structure and biogenesis]; Region: TsaC; COG0009" /db_xref="CDD:439780" gene complement(24568..25545) /gene="qor" /locus_tag="PA0023" /db_xref="GeneID:880685" CDS complement(24568..25545) /gene="qor" /locus_tag="PA0023" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="oxygen-dependent quinone oxidoreductase" /protein_id="NP_248713.1" /db_xref="GeneID:880685" /translation="MAKRIQFAAYGGPEVLEYRDYQPAEPGPREVRVRNRAIGLNFID TYYRSGLYPAPGLPSGLGSEGAGEVEAVGSEVTRFKVGDRVAYATGPLGAYSELHVLA EEKLVHLPDGIDFEQAAAVMLKGLTTQYLLRQTYELRGGETILFHAAAGGVGLFACQW AKALGVQLIGTVSSPEKARLARQHGAWETIDYSHENVARRVLELTDGKKCPVVYDSVG KDTWETSLDCVAPRGLLVSFGNASGPVTGVNLGILSQKGSLYVTRPTLGSYADTPEKL QAMADELFGLIERGDIRIEINQRFALAEAARAHTELAARRTTGSTVLLP" misc_feature complement(24571..25545) /gene="qor" /locus_tag="PA0023" /note="Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; Region: MDR; cl16912" /db_xref="CDD:450120" misc_feature complement(order(24601..24603,24607..24609,24748..24759, 24820..24834,24895..24900,24970..24972,25015..25017, 25027..25032,25087..25095,25102..25104,25156..25158, 25165..25167,25177..25179,25408..25410,25420..25425)) /gene="qor" /locus_tag="PA0023" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:176189" misc_feature complement(order(24739..24744,24751..24774,24796..24813, 24850..24855,25141..25143)) /gene="qor" /locus_tag="PA0023" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:176189" gene 25736..26653 /gene="hemF" /locus_tag="PA0024" /db_xref="GeneID:880901" CDS 25736..26653 /gene="hemF" /locus_tag="PA0024" /EC_number="1.3.3.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="coproporphyrinogen III oxidase" /protein_id="NP_248714.1" /db_xref="GeneID:880901" /translation="MTDRIAAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGG GRTRVIGDGALIEKGGVNFSHVFGDSLPPSASAHRPELAGRGFQALGVSLVIHPENPH VPTSHANVRFFCAEKEGEEPVWWFGGGFDLTPYYAHEEDCVHWHRVARDACAPFGADV YPRYKEWCDRYFHLKHRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIV QRRKHTPFDERQREFQAYRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWG YDWKPEPGSEEARLTEYFLADRDWLAGQP" misc_feature 25736..26638 /gene="hemF" /locus_tag="PA0024" /note="Coproporphyrinogen-III oxidase HemH, oxygen-dependent [Coenzyme transport and metabolism]; Region: HemF; COG0408" /db_xref="CDD:440177" gene 26711..27535 /gene="aroE" /locus_tag="PA0025" /db_xref="GeneID:880894" CDS 26711..27535 /gene="aroE" /locus_tag="PA0025" /EC_number="1.1.1.25" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="shikimate dehydrogenase" /protein_id="NP_248715.1" /db_xref="GeneID:880894" /translation="MDRYCVFGNPIGHSKSPLIHRLFAEQTGEALVYDAQLAPLDDFP GFARRFFEQGKGANVTVPFKEEAYRLVDELSERATRAGAVNTLIRLADGRLRGDNTDG AGLLRDLTANAGVELRGKRVLLLGAGGAVRGVLEPFLGECPAELLIANRTARKAVDLA ERFADLGAVHGCGFAEVEGPFDLIVNGTSASLAGDVPPLAQSVIEPGRTVCYDMMYAK EPTAFNRWAAERGAARTLDGLGMLVEQAAEAFFLWRGVRPASAPVLETLRRQLATV" misc_feature 26711..27526 /gene="aroE" /locus_tag="PA0025" /note="shikimate 5-dehydrogenase; Reviewed; Region: aroE; PRK00258" /db_xref="CDD:234703" protein_bind 27577..27592 /experiment="ChIP-chip [PMID: 19682264]" /experiment="ChIP-PCR [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA0027, PA0026, PA0028'" /bound_moiety="LasR" gene 27646..28632 /gene="plcB" /locus_tag="PA0026" /db_xref="GeneID:880904" CDS 27646..28632 /gene="plcB" /locus_tag="PA0026" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phospholipase C" /protein_id="NP_248716.1" /db_xref="GeneID:880904" /translation="MKTFARLAAGLCICAIASQANAWSQPTHKNIVKDALAFMNSSYA TEEMRQAYRFYVSAAGSEAQAGEILGQAAFDVDDFKDTRLGGWWVGYEHAPLWGAASG IVNYTSYWHFLNLARDGDSHGNPHGGYDYRYHKVDGGIADVDWYAMVYLYNRELKRED FDTTEAHYRQGTRSDWQEHYGDFQTAAFQPIDNLATYWFEQFRAAPSLQTIGYALHAT GDVAQPHHVWITSANGHSSWEGWVDDHYASEKLNDPAAVANLVGRYDPSKSIRDLLTQ TGQVAYARPEPLYDTSYETRLRVAKELIPESIALTVTVLTKGANSFDAPTAL" misc_feature 28003..28596 /gene="plcB" /locus_tag="PA0026" /note="Zinc dependent phospholipase C (alpha toxin); Region: Zn_dep_PLPC; cd11009" /db_xref="CDD:211381" gene 28613..29899 /locus_tag="PA0027" /db_xref="GeneID:880919" CDS 28613..29899 /locus_tag="PA0027" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248717.1" /db_xref="GeneID:880919" /translation="MHRLLSDRARGWRRALCGIVLGLLAWSAHGVPAKAPQDLRIDGE VLPGRSIDLLEQALSRVKFNTDPQQLRRGLVENRLLARAVEDQLTAQSRADLDASVEI EAGNLLEQVYGRRYREDLGPYLRQPRALSAERLREVLAPRSRGLVENSLLLDETQRRE AAGVELIGWQFPGQPAQVLDLLSLYEGDNVQGQVELQQGNLAYLARQVQTRIRRDYLW YRLARDGFGPAERQGVRTLVRDKLVRHRYLHQIGLYSDFHHESDALRELAGKVSDKDA EAYYRRNLERYRNVAQVQAAHIRLADQASADKVYAELRGGLAFDEAVRRYSLADDRDR DPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGAFEIVRVRSREDRQLPLDD RSVRFEVNQAVAREQLAAQFETRLRNLLAGARVEGL" misc_feature 29465..29887 /locus_tag="PA0027" /note="Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, chaperones]; Region: SurA; COG0760" /db_xref="CDD:440523" gene 29896..30498 /locus_tag="PA0028" /db_xref="GeneID:878631" CDS 29896..30498 /locus_tag="PA0028" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248718.1" /db_xref="GeneID:878631" /translation="MKRWLGVALGCSGLAIALACAGVLLAPADMAASSSSPSPARTVA ALPAVDDRPPPPAPVRSQAAAPAYEAEPPVAELDREQAIQFMQMLRDEGDPRSPPLGG LQPRQGATAQELADPKQYQAFEERQTRELVQAYTSGVQQIPEIRARIEAAEQGGERSA EEIDEARAALGQLEMMRDKLQRESPQLLPGDSAPTSPAAP" gene complement(30502..32055) /locus_tag="PA0029" /db_xref="GeneID:880672" CDS complement(30502..32055) /locus_tag="PA0029" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sulfate transporter" /protein_id="NP_248719.1" /db_xref="GeneID:880672" /translation="MWTRLLPFLAWLPGLHRGMLGREAWVGLNGAILALPQSMAYALI AGLPAEYGLYAAMLPVAIACLWGSSRYLVSGPTAAISVLLFSSVAPLAPLGSPQYVQA VLLLTFLAGAFQWLLGVLRVGSLVNFVSHSVMLGFTLGAALLIVLGQLPYLLGLAASG EGAAPGNGWRLLARFAEFDGPSLLVGGFSFALSLLVRRLRPRWPALLLGLLGGATLVW ALPGTFASVAHVQALSSALPGWSPLVFDSRSILDLLPAAVACGMLGLVTSLSIARALA ARQGDAFDANQEVRAQGLSNLLGPWLSASLSAGSFTRSGLNLEAGARSPLAGAFSALW VALLAVLGARLIEHVPLPAMAAGILLIAWGLIDRPALRALYRSGRAECLVAGLTALAT LLLPLQNAIYAGVLASLVFYLRRTSTPRVLRQRNDEEEVLRIEGSIFFGACDYLQRLM RQCDRPRLVLDARQVNFIDFAGAVLLQQEARRLHAEGRRLVLRHARPQVREALGRQAD EGCRLHYEG" misc_feature complement(30541..32016) /locus_tag="PA0029" /note="Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism]; Region: SUL1; COG0659" /db_xref="CDD:440424" gene complement(32060..32983) /locus_tag="PA0030" /db_xref="GeneID:880659" CDS complement(32060..32983) /locus_tag="PA0030" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248720.1" /db_xref="GeneID:880659" /translation="MNRLPTCLLAATLFLGSASLYAEDPACARVRLADPGWSDIAVTN ATAAFLLESLGYQVKIDTLSVPIIYGGLRDGQVDAFLGGWMPAHQDYHDKFVASGQVE RLGRNLDGTRFTLAVPRYVWDAGVHRFEDLAAQGQRFNRKLYGIGSGAPANQSIQKMI DANQFGLGDWKLVESSEQAMLAELGRAEKRQRWLVFLGWTPHPMNIRHDLRYLEGGEQ YFGDRGQVYTLARKGYAAQCPNPARLLANLRFDLDMENRLMSDALEGTATPASATRAW LKANPRVLEAWLQGVTSRDGGDALAAVRGQP" misc_feature complement(32063..32920) /locus_tag="PA0030" /note="choline ABC transporter, periplasmic binding protein; Region: ABC_choline_bnd; TIGR03414" /db_xref="CDD:188316" misc_feature complement(order(32387..32389,32531..32536,32546..32548, 32645..32647,32732..32734,32867..32869,32873..32875)) /locus_tag="PA0030" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:270358" misc_feature complement(order(32246..32248,32255..32260,32267..32269)) /locus_tag="PA0030" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:270358" gene complement(33000..34511) /gene="betC" /locus_tag="PA0031" /db_xref="GeneID:880657" CDS complement(33000..34511) /gene="betC" /locus_tag="PA0031" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="choline sulfatase" /protein_id="NP_248721.1" /db_xref="GeneID:880657" /translation="MKTSPNILFIMADQMAAPLLPLHDPRSVLRMPHLSRLAERAVVF DSAYCNSPLCAPSRFTLVSGRLPTRIGAWDNAADFAADTPTYAHYLRNLGYRTALSGK MHFCGPDQLHGYEERLTSDIYPADYGWAVNWDEPEVRPSWYHNMSSVLQAGPCVRTNQ LDFDEEVVFKARQYLYDHVRQHAGQPFCLTVSMTHPHDPYSIPASYWNLYRDEDIPLP RQRFAQEEQDPHSQRLLKVIDLWDKPLPEERIRAARRAYFGACSYVDAQIGALLATLE KCGLADDTIVVFSGDHGDMLGERGLWYKMHWFEMAARVPLLVHAPARFAPRRIGASVS TVDLLPTLVELAGGQVDPRLPLEGRSLLPHLRDGSGHDEVIGEYTAEGTLSPLMMIRR GDYKFIYSEQDPCLLYDLRNDPQERENLAASPAHRGTFEAFLDEARRRWDIPAITRAV LDSQRRRRLVAAALARGRLASWDHQPWVDASQQYMRNHIDLDDLERRARFPQP" misc_feature complement(33009..34505) /gene="betC" /locus_tag="PA0031" /note="choline-sulfatase; Region: chol_sulfatase; TIGR03417" /db_xref="CDD:274570" gene 34624..35538 /locus_tag="PA0032" /db_xref="GeneID:880646" CDS 34624..35538 /locus_tag="PA0032" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248722.1" /db_xref="GeneID:880646" /translation="MGERLMPLSLDLLRVFESAARQLSFTAAAEELGTTQPAVSQQIK RLEKELATPLFQRVHRGIVLTDAGQLLLRHVAAGLETIDAGIAALGARQRHEVLQVAT DYAFAAYWLMPRLPRFHQAHPHLDVSLVTSERGLAGQRGDIDVAILFGDGRSKHGEAH RLFREEVFPVCSPRLVEGLQLPLAKAHLARLPMLHLKPAQHARWFDWPALFEALAIDR QPIPAVLSFDNYTLLIQAAIAGQGVAIGWRHLVDGLLEQGLLCRPIGESCLSRYGYYA VLPERKRRQRLVDGFVDWLQAELQAGGA" misc_feature 34645..35517 /locus_tag="PA0032" /note="putative choline sulfate-utilization transcription factor; Region: chol_sulf_TF; TIGR03418" /db_xref="CDD:188320" gene 35549..35926 /locus_tag="PA0032a" /db_xref="GeneID:17373336" CDS 35549..35926 /locus_tag="PA0032a" /codon_start=1 /transl_table=11 /product="DOPA 4,5-dioxygenase" /protein_id="YP_008719728.1" /db_xref="GeneID:17373336" /translation="MNEYSTPRIQGFHAHVYFDAQSIERARALCEEAARRFPLKMGRV HERPVGPHPDWSCQLAFAPEVFGELVPWLAIHRQDLVVFIHPVTGNDLLDHRDRAIWM GAIRPLDLSILDEGPQRYDFAVP" misc_feature 35549..35890 /locus_tag="PA0032a" /note="Aromatic ring-cleaving dioxygenase [Secondary metabolites biosynthesis, transport and catabolism]; Region: DodA; COG3805" /db_xref="CDD:443018" gene complement(35905..36270) /locus_tag="PA0033" /db_xref="GeneID:880641" CDS complement(35905..36270) /locus_tag="PA0033" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248723.1" /db_xref="GeneID:880641" /translation="MRTFDLTAALGDRANQPEISRLLVAQLMTSNNEDTRKLRRAQER EQTQELNELAHRLAGMASLIHAHAVERACHQLEIACGESSVRKLADAVDDLVTALGEL QCELHDWMTMTAPQGTAKS" misc_feature complement(35962..36204) /locus_tag="PA0033" /note="Hpt domain; Region: Hpt; pfam01627" /db_xref="CDD:426352" misc_feature complement(order(36040..36042,36049..36051,36094..36099, 36106..36108)) /locus_tag="PA0033" /note="putative binding surface [active]" /db_xref="CDD:238041" misc_feature complement(36106..36108) /locus_tag="PA0033" /note="active site" /db_xref="CDD:238041" gene complement(36278..36901) /locus_tag="PA0034" /db_xref="GeneID:879223" CDS complement(36278..36901) /locus_tag="PA0034" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_248724.1" /db_xref="GeneID:879223" /translation="MSKVLIVDDHPAIRLAVRLLFERDGFTIVGEADNGAEALQVARK KSPDLAILDIGIPKIDGLEVIARLKSLKLDTKVLVLTRQNPAQFAPRCLQAGAMGFVS KRENLSELLLAAKAVLAGYIHFPTGALRSINQQSRDNEARMLESLSDREMTVLQYLAN GNTNKAIAQQLFLSEKTVSTYKSRIMLKLNAHSLAGLIDFARRHELI" misc_feature complement(36281..36898) /locus_tag="PA0034" /note="fimbriae biosynthesis transcriptional regulator FimZ; Region: PRK09935" /db_xref="CDD:182154" gene complement(37087..37893) /gene="trpA" /locus_tag="PA0035" /db_xref="GeneID:879479" CDS complement(37087..37893) /gene="trpA" /locus_tag="PA0035" /EC_number="4.2.1.20" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="tryptophan synthase subunit alpha" /protein_id="NP_248725.1" /db_xref="GeneID:879479" /translation="MSRLQTRFAQLKQENRAALVTFVTAGDPDYASSLEILKGLPAAG ADVIELGMPFTDPMADGPAIQLANIRALDGGQTLARTLQMVREFRSGDSETPLVLMGY FNPIHHYGVERFIAEAKEVGVDGLIVVDLPPEHNEDLCHPAQAAGIDFIRLTTPTTGD QRLPTVLEGSSGFVYYVSVAGVTGANAATLEHVEEAVARLRRHTDLPIGIGFGIRSAE HAAAVARLADGVVVGSALIDRIAKARDNAQAVKDVLALCGELAEGVRNAR" misc_feature complement(37096..37878) /gene="trpA" /locus_tag="PA0035" /note="tryptophan synthase subunit alpha; Provisional; Region: trpA; PRK13111" /db_xref="CDD:237285" misc_feature complement(order(37192..37197,37255..37260,37342..37347, 37369..37371,37702..37704,37714..37716,37747..37749)) /gene="trpA" /locus_tag="PA0035" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:240075" misc_feature complement(order(37345..37347,37588..37590,37714..37716, 37747..37749)) /gene="trpA" /locus_tag="PA0035" /note="active site" /db_xref="CDD:240075" misc_feature complement(order(37588..37590,37714..37716,37747..37749)) /gene="trpA" /locus_tag="PA0035" /note="catalytic residues [active]" /db_xref="CDD:240075" misc_feature complement(order(37408..37410,37417..37425,37429..37431, 37489..37491,37498..37500,37504..37509,37573..37575, 37582..37584,37696..37701,37708..37710,37717..37719, 37723..37734)) /gene="trpA" /locus_tag="PA0035" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:240075" gene complement(37890..39098) /gene="trpB" /locus_tag="PA0036" /db_xref="GeneID:879212" CDS complement(37890..39098) /gene="trpB" /locus_tag="PA0036" /EC_number="4.2.1.20" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="tryptophan synthase subunit beta" /protein_id="NP_248726.1" /db_xref="GeneID:879212" /translation="MTSYRNGPDAKGLFGRFGGQYVAETLMPLILDLAREYEKAKDDP AFQEELAYFQRDYVGRPSPLYFAERLTEHCGGAKIYLKREELNHTGAHKINNCIGQIL LARRMGKKRIIAETGAGMHGVATATVAARFGLQCVIYMGTTDIDRQQANVFRMKLLGA EVIPVTAGTGTLKDAMNEALRDWVTNVDSTFYLIGTVAGPHPYPAMVRDFQAVIGKET REQLAEKEGRLPDSLVACIGGGSNAMGLFHPFLDDAGVQIVGVEAAGHGIDTGKHAAS LNGGVPGVLHGNRTFLLQDADGQIIDAHSISAGLDYPGIGPEHAWLHDTGRVEYTSIT DDEALEAFHTCCRLEGIIPALESSHALAEVFKRAPSLPKEHIMVVNLSGRGDKDMQTV MHHMQQESKA" misc_feature complement(37902..39098) /gene="trpB" /locus_tag="PA0036" /note="Tryptophan synthase beta chain [Amino acid transport and metabolism]; Region: TrpB; COG0133" /db_xref="CDD:439903" protein_bind complement(39172..39198) /experiment="DNAse footprinting [PMID: 2107533]" /experiment="EMSA [PMID: 2107533]" /experiment="Hydroxyl-radical footprinting [PMID: 2107533]" /note="Transcription factor binding site for NP_248727." /bound_moiety="TrpI" gene 39202..40089 /gene="trpI" /locus_tag="PA0037" /db_xref="GeneID:883090" CDS 39202..40089 /gene="trpI" /locus_tag="PA0037" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="HTH-type transcriptional regulator TrpI" /protein_id="NP_248727.1" /db_xref="GeneID:883090" /translation="MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLL EDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRRQTAEAPFVLGVPG SLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFE LAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAWAASQGLAAEALR YGQGFEHLYYLLEAAVAGLGVAIAPEPLVRDDLAAGRLAAPWGFIETDARLALWVPAR LHDPRAGRLAQWLREQLAG" misc_feature 39223..39399 /gene="trpI" /locus_tag="PA0037" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 39484..40068 /gene="trpI" /locus_tag="PA0037" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator TrpI, which is involved in control of tryptophan synthesis, contains type 2 periplasmic binding fold; Region: PBP2_TrpI; cd08482" /db_xref="CDD:176171" misc_feature order(39484..39507,39511..39564,39568..39588) /gene="trpI" /locus_tag="PA0037" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176171" misc_feature order(39502..39507,39511..39513,39871..39879,39937..39939) /gene="trpI" /locus_tag="PA0037" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176171" protein_bind complement(39512..39524) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(40091..40103) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0038" /bound_moiety="AmrZ" gene 40190..40405 /locus_tag="PA0038" /db_xref="GeneID:879209" CDS 40190..40405 /locus_tag="PA0038" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248728.1" /db_xref="GeneID:879209" /translation="MSNHHTYKKIELVGSSKTSIEDAINNALAEAAKSIQHLEWFEVV DTRGHIENGAVGHYQVTLKVGFRIANS" misc_feature 40199..40393 /locus_tag="PA0038" /note="Flavin-binding protein dodecin [General function prediction only]; Region: COG3360" /db_xref="CDD:442588" gene 40589..40816 /locus_tag="PA0039" /db_xref="GeneID:879200" CDS 40589..40816 /locus_tag="PA0039" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248729.1" /db_xref="GeneID:879200" /translation="MFMKKLMLAVGLFAVAGSAFAAKPCEELKAEIDAKIKANGVPAY TLEIVDKGSVTDKKVVGTCDGGTKEIVYQRG" misc_feature 40661..40810 /locus_tag="PA0039" /note="Protein of unknown function (DUF1161); Region: DUF1161; pfam06649" /db_xref="CDD:429051" gene 41113..42801 /locus_tag="PA0040" /db_xref="GeneID:879196" CDS 41113..42801 /locus_tag="PA0040" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248730.1" /db_xref="GeneID:879196" /translation="MALHRLAFIFLCLPLMASAAPFTSPGDRDLIRDRQQRLLDEQRK RLEELQQLPGKGAPAAADASGGDERCFEIRRIELEGAGHLGESARRQLLAPYQGRCLG VGQLNALLKAVTDHYLDRGYVTTRAYLPQQDLASGTLRIIVVEGRLEGLDSSALASPR ELTMSFPGRTGELLDLRELEQLVDQLSRLPSRQAQLELVPGSEVGGSRVRLKGERDKP WRVSATRNNDGDVSTGEQQMGLGLDWDSPLGLADQLNLRANRDAVTDRWRHSDSQSLF YSLPWGWWTFTYGYSQSDYRTRNEASGFPFKLDGDSRSHQFRAERVLHRDGVSKTAMS LGLSHQRTNNYVEDTRLEDQSTRITETQLGFNHGRRIGSGFVNLDLGWQQGIGALGAQ GRGHPQAGDPNARYDKYSLTLSYLQPFQLWGERFSFDSLATGQRSEDVLFSPQRISLG GNSSVRGFKDQTLTGDSGGYWRNQLRWRRAVEWAPLRPWLQEYGVAFAYDVGVIRHDR YNDGASGRMSGNAIELDARGRYFAASVGFARSLERPSAIERREHPIYFRVDAFF" misc_feature 41128..42798 /locus_tag="PA0040" /note="Hemolysin activation/secretion protein [Intracellular trafficking, secretion, and vesicular transport]; Region: FhaC; COG2831" /db_xref="CDD:442079" gene 42914..53521 /locus_tag="PA0041" /db_xref="GeneID:878601" CDS 42914..53521 /locus_tag="PA0041" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hemagglutinin" /protein_id="NP_248731.1" /db_xref="GeneID:878601" /translation="MDIRSPLNQCIALSLAGILFLNPIVAAAAGLALDKAAGGNTGLG QAGNGVPIVNIATPNDAGLSNNHFRDYNVGANGLILNNATGKTQGTQLGGIILGNPNL KGQAAQVILNQVTGGNRSTLAGYTEVAGQSARVIVANPHGITCQGCGFINTPRATLTT GKPIMDGQRLERFQVDGGDIVVEGAELNVGNLEQFDLITRSAKLNAKLYAKNLNIVTG RNDVQADSLQATPRAADGSEKPQLAIDSSALGGMYAGAIRLVGTEQGVGVRLAGDMAA SGGDIRIDASGKLSLAQASSQGDLKIAAQAVELNGKTYAGGSAEIRSAEELVNRQSLA ARERIVLEAAHIDNAGVIEAGVEPDERRNARGDLELRSGTLRNAGSLVASRALEAKAS QALDNQGGSLKGATVRVDAGHLDNRGGKLLAEGELRVEASSLDNRQDGLLQSRDRAVV KTRGDLDNRGGQVIGLNDLEVGAATLDNGQQGLLGSQQSTRVSAQALVNRGDGEVSGK RVEARVGSLDNRGGKLIGDDLLVVASGAIDNRLGLFSAANRLDLRARSLDNSGKGTLS SRGGLEVSLGGLLDNRDEGNLLSQGAQRVTVGQLDNRAGGLLSSRSELNVHGASLDNR GGVLVADAGLSATGGAFDNRDGGSASGKAGVRVEVASLRNDQGGKLLSDGRLDLAANA VGNAGGRIAAKGDLQATLGSLAQQGGELVSEKTLKVAADTLDNSQSGLIAANGGIAIE ARQVDNRAGEISSTSKVAVNAREQLDNRGGKVIGDSGLRLTVQRLLNQAKGVLAGRDG LSLDGGELFNGDGGRLDSQNSLSVSLGGVLDNQGGALVSEGSLTARAARLDNRGGTFS SAGALALTSQAALDNQGGRLLSDAGVTLQGASLDNSRSGVISAKGAVDIRTGVLDNSR NGGIGSNAGITLVAARLDNGQQGRVSAKGLLDANLKGLDQRGGGVLISETGVTLDLNG GTLVNRDGGLIATPGALLLRQLGAVDNGAGGEISSDRAFTLAAASLDNRGGRLIGAAN LTLRIAQALDNSLAGVISGAAGLDIAAARLDNSAKGTLASRAGIDLRVDGALDNHAEG TVSGARLTLASASLDNSGKGLLSGNAGLSVATGALDNAEGGQLISQGVLDVSSADLDN RGGALSGKQSLRLSAANLDNRGGLLTSDGELELTAGRVDSADGGEISARGDLRLTVER LVQRQGRLVGERGVSLDLRGGDLDNQGGLISARGPLSIERLSVLDNRQGGEISSQQGF ELLARRIDNGQQGRIISAGKLRLDADALGNAGAGLLSGWQGLTVTGGSLDNSAGGTLS SKDGELAISLGGALDNHGQGALVSKGAQRIDAASLDNAQGIVSGESDVTLSIAGKLDN GQGGLVSAQRALSFERDDTLLNNAGGRINGGSLLLKGASLDNSDGQLISQGRLDAILG GALVNTGAARLASGGDLLLRSASVDNRGGKLVSQGLLEISAGSLDNSASGTLASQAGM SLRLGGGALRNQQDGLIFSQAGALDVQAGSLDNRQGTLQAQGDNRLRIGGALDNQGGR LDSRAGNLDLQSGSLDNGAGGVLNSAKGWLKLVTGLFDNSAGVTQAQSLEIRAGQGVR NQQGHLSALGGDNRIVTADFDNQGGGLYASGLLSLDGQRFLNQGAAAGQGGKVGAGRI DFSLAGALANRFGQLESESELHLRAAAIDNSGGSLRALGRSGSTRLVAGGLNNAYGVL ESANQDLDLQLGSLANAGGRILHTGNGTFGLDSGQVIRAGGELTTNGLLDIRASEWTN SSVLQAGRLNLDIGTFRQTAEGKLLAVQSFTGRGGDWSNDGLLASDGSFRLDLSGGYR GNGRATSLGDFALNAASLDLGNAASLAGGANVTLGAGNLLVNRGRITAAGDLVASAAS LNNYGTLGGGGNLRLNAPALLNERGLLFSGADMTLRAGDITNLYGDVYSLGRLDIARD DAGNRAASLRNLSGVIESGKDFSLRASLIENRRAVLESKSGLYTAKMEQTACIEGVNA GDCSGKRNAIWTITQRDKTEVTASSAMGQLLAGGDFAIDGGTLNNLSSLIGSGGNLTA NLEVLDNQGLETGELETIRVLRTARGGDIGGIDQKSRNFTNLYWYQSANFDPARAGEI PAALNAILSDWSFEYEFPSKGPTPISSGDQSYAAVIQAAGDVTVNASTRIDNGVTRPG YTFVGSGRQVGDSAVGGSGVSVVVPLTSQLPPDLARRQVNPVTLPGFSLPQGDNGLFR LSSRFAEDGNGSAALGAGADRTQGGSGVSVGQQGAGNAAGTWQGQGVRVDGLAGAANV QGQGGSTLGGSLPGVARVQGVPGNATPSASHKYLIETNPALTELKQFLNSDYLLSGLG MNPDDSKKRLGDGLYEQRLIRDAVVARTGQRYIDGLSSDEALFRYLMDNAIAYKDQLH LQLGVGLSAEQMAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLAPNGALIQGRDV KLVSGGDLHNVGTLRARNDLSATADNLDNSGLIEAGKRLDLLAGDSIRNRQGGVIAGR DVSLTALTGDVINERSVTRYDSALDGRTWERSFADSAARVEAANSLNVQAGRDIANLG GVLQSRGDLSLDAGRDVTVAAVEDRQGQTRWSTSRLQSVTQLGAEVSAGRDLNVSAGR DLTAVASTLEARRDIALSAGRDVTLAAAANEEHAYSKTRKVTYQEDKVAQQGTRVDAG GDLAINAGQDLRLIASQASAGDEAYLVAGDKLELLAANDSNYYLYDKKKKGDFGRKET RRDEVTDVKAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGGAVTFEAVKDL HQESHEKSKGDLAWNSAKGKGQTDETLRQTQIVAQGNLAIKAVEGLKIDLKHIDQKTV SQTIDAMVQADPQLAWLKEAEQRGDVDWRMVQEVHDSWKYSNSGMGPATQIAVAIAAA AIGGMAAAGALSGAGVGASSFAMGAGVGAAGSLSGTAAVSLINNKGDLGKVLKDSFSS DSLKQIAIASLTGGLTAEYFDGILQTKTDPLTGKVTVDLSSLSGVGRFAANQAMQNAT STVLSQALGQGGSLNEALKSALYNSFAAAGFNFVGDIGQEYSLKPGDPSMVTMHALMG GLAAQVSGGDFATGAAAAGANEALVAKLDQAFKSLSPENREAMVTMGSQLVGVLAAAV RDPDVTGKALESAAWVAKNSTQYNFLNHQDVADLDNALQKCKSQGNCRQVEEEFKARS DENRRRLNGCVAVGNCAEIRAEIDAGSTALNELVARQETANPGGSDSDIAYGFLMGRN VVDWTTAGQLHLEQTANLWWNGNPQWQKEVGAYLDQTGFNPFGIGVPAMGGAAGKVTA KALMNALKAGELPKGEVAPGKANLPTIGALADAEAGMPYTHPVKLAAKATGTAGKIKI EAGAIPDANEVRAGQGLSGLGYDVTHQTTASAKGIQGQRTADLHVDGLGSIDVYTPKN LDPTKIVRAIEKKSNQAGGVLVQADLPSTDMSSIAARMWGKTNAQSIKTIFFQKPDGS LVRFDRPAGGG" misc_feature 42998..43786 /locus_tag="PA0041" /note="TPS secretion domain; Region: TPS; pfam05860" /db_xref="CDD:461762" misc_feature 43793..43843 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 43844..43903 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 43907..43960 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 44048..44107 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 44111..44164 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 44168..44227 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 44231..44290 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature <44273..48310 /locus_tag="PA0041" /note="Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport]; Region: FhaB; COG3210" /db_xref="CDD:442443" misc_feature 44294..44353 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 44357..44473 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 44477..44533 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 44537..44593 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 44600..44659 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 44666..44719 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 44726..44785 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 44789..44845 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 44849..44911 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 44915..44971 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 44975..45031 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 45035..45094 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 45098..45154 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 45158..45217 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 45221..45277 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 45284..45343 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 45347..45406 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 45410..45466 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 45470..45529 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 45659..45715 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 45719..45778 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 45794..45847 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 45860..45910 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 45920..45976 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 45980..46039 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46046..46105 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46109..46168 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46172..46228 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46232..46294 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46298..46351 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46358..46414 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46418..46477 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46481..46537 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46541..46603 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46622..46666 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46673..46732 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46736..46795 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46799..46852 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46865..46924 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46931..46987 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 46991..47053 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 47057..47116 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 47120..47176 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 47180..47239 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 47246..47299 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 47306..47362 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 47369..47431 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 47438..47497 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 47501..47560 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 47627..47689 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 47693..47749 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 47753..47812 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 47816..47872 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 47876..47950 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 47954..48007 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 48014..48079 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 48083..48142 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 48146..48208 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 48272..48322 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 48386..48442 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 48446..48502 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 48506..48565 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 48626..48682 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 48686..48742 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 48746..48823 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 48827..48880 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 48887..48988 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 48992..49042 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 49043..49099 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 49103..49159 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 50387..50440 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 50444..50503 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 50507..50569 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 50573..50635 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 50639..50698 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 50702..50746 /locus_tag="PA0041" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature 51008..51427 /locus_tag="PA0041" /note="Hemagglutinin repeat; Region: Fil_haemagg_2; pfam13332" /db_xref="CDD:433123" misc_feature 51839..52288 /locus_tag="PA0041" /note="Possible hemagglutinin (DUF637); Region: DUF637; pfam04830" /db_xref="CDD:428148" misc_feature 53153..53473 /locus_tag="PA0041" /note="C-terminal (CT) toxin domain of a contact-dependent growth inhibition (CDI) system (CdiA-CT) similar to that of Burkholderia pseudomallei, and related proteins; Region: CDI_toxin_Bp_tRNase-like; cd20727" /db_xref="CDD:412044" misc_feature order(53165..53167,53258..53263,53291..53299,53324..53329, 53333..53338,53345..53350) /locus_tag="PA0041" /note="putative inhibitor binding site [polypeptide binding]; other site" /db_xref="CDD:412044" gene 54121..54822 /locus_tag="PA0041a" /db_xref="GeneID:17373337" CDS 54121..54822 /locus_tag="PA0041a" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="YP_008719729.1" /db_xref="GeneID:17373337" /translation="MPRQGRVVLPNYPLHVVQRGHNRQVVFAEDEDYQRYLSDLRDLK DAFGIKVYAFCLMTNHVHLLLAPGDSLSGLAQLMKTLAARTTRYRNRLEGRSGTLWES RYKSSVVQSDAYLLACCRYIELNPVRARMVDDVAAYPWSSYGLRADWLKEPNWLDMDP CFIELGQTAEERYRRYVTFMKEAIPAEELRLIREAVQRGQLTGNQRFVDEIERVAGVR IERRGQGRPRLEQGK" misc_feature 54121..54537 /locus_tag="PA0041a" /note="REP element-mobilizing transposase RayT [Mobilome: prophages, transposons]; Region: RAYT; COG1943" /db_xref="CDD:441546" gene 56546..56941 /locus_tag="PA0042" /db_xref="GeneID:878502" CDS 56546..56941 /locus_tag="PA0042" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248732.1" /db_xref="GeneID:878502" /translation="MPVLALRLTALAALVISVSGCVMEAYGSRARSDAQSWIGLPIQD VIKRFGEPERVTGDAARQKYVWKEYENYSHDYDYTYYEQGHGNTPNSSVLNQKTGTAN QSGYYTCIYEFFADASGRVVDATARGECR" gene complement(57212..58594) /locus_tag="PA0043" /db_xref="GeneID:878401" CDS complement(57212..58594) /locus_tag="PA0043" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248733.1" /db_xref="GeneID:878401" /translation="MGYWRQRRALGGRRTAVRAPRGRLLLWCAQARRHPLSRRMESSM TLSLDLLLSLCTALAIGLLIGAERGWQERDHEDARQIAGIRTFSLAGLLGGFATLLAG ELGSAVWVALLLALAALAVAGYVSDVRRGGDQGMTTEIALLMTFLLGSLALTEQRLLA AAGGIVLTLLLSLKDKLHALLKRLTAEELSGTLKLLFISVVLLPVLPNQGYGPWAFFN PYLTWWMVVLIAALGFSAYLAIRLIGSRKGLLLTAVLGGLVSSTVMTLTLARLRERMP DALLACALLATSALMFPRILVEIGAIHPALLKELALPFAATTLVYLGGTLFHALRGGR ASQEAPDEPGLRNPFELLPALRFAALLSAILLLVEVGRRLFGDAGIYAVALLSGLADV DAITLSLARAAQGELDPGVASRGIALAALSNSLVKAGLVVLVGGKRLALQTLPFSLAG LLVGALLILL" misc_feature complement(57254..58429) /locus_tag="PA0043" /note="Membrane component of predicted Mg2+ transport system, contains DUF4010 domain [Inorganic ion transport and metabolism]; Region: MgtC; COG3174" /db_xref="CDD:442407" protein_bind 58692..58709 /experiment="EMSA [PMID: 19376850]" /experiment="Site directed mutagenesis [PMID: 19376850]" /note="Transcription factor binding site for NP_250404." /bound_moiety="ExsA" protein_bind 58702..58728 /experiment="'EMSA [PMID: 19376850, 18373522]'" /experiment="DNAse footprinting [PMID: 18373522]" /experiment="Site directed mutagenesis [PMID: 19376850]" /note="Transcription factor binding site for NP_250404." /bound_moiety="ExsA" gene 58786..60159 /gene="exoT" /locus_tag="PA0044" /db_xref="GeneID:878350" CDS 58786..60159 /gene="exoT" /locus_tag="PA0044" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="exoenzyme T" /protein_id="NP_248734.1" /db_xref="GeneID:878350" /translation="MHIQSSQQNPSFVAELSQAVAGRLGQVEARQVATPREAQQLAQR QEAPKGEGLLSRLGAALARPFVAIIEWLGKLLGSRAHAATQAPLSRQDAPPAASLSAA EIKQMMLQKALPLTLGGLGKASELATLTAERLAKDHTRLASGDGALRSLATALVGIRD GSRIEASRTQAARLLEQSVGGIALQQWGTAGGAASQHVLSASPEQLREIAVQLHAVMD KVALLRHAVESEVKGEPVDKALADGLVEHFGLEAEQYLGEHPDGPYSDAEVMALGLYT NGEYQHLNRSLRQGRELDAGQALIDRGMSAAFEKSGPAEQVVKTFRGTQGRDAFEAVK EGQVGHDAGYLSTSRDPGVARSFAGQGTITTLFGRSGIDVSEISIEGDEQEILYDKGT DMRVLLSAKDGQGVTRRVLEEATLGERSGHGEGLLDALDLATGTDRSGKPQEQDLRLR MRGLDLA" misc_feature 59107..59466 /gene="exoT" /locus_tag="PA0044" /note="GTPase-activating protein (GAP) domain found in bacterial cytotoxins, ExoS, SptP, and YopE. Part of protein secretion system; stimulates Rac1- dependent cytoskeletal changes that promote bacterial internalization; Region: ToxGAP; cd00219" /db_xref="CDD:119405" misc_feature order(59149..59151,59212..59220,59233..59235,59242..59244) /gene="exoT" /locus_tag="PA0044" /note="switch II binding region [active]" /db_xref="CDD:119405" misc_feature order(59215..59217,59230..59232) /gene="exoT" /locus_tag="PA0044" /note="Rac1 P-loop interaction site [polypeptide binding]; other site" /db_xref="CDD:119405" misc_feature order(59230..59232,59350..59358) /gene="exoT" /locus_tag="PA0044" /note="GTP binding residues [chemical binding]; other site" /db_xref="CDD:119405" misc_feature order(59230..59232,59242..59244,59341..59343) /gene="exoT" /locus_tag="PA0044" /note="switch I binding region [active]" /db_xref="CDD:119405" misc_feature 59527..60084 /gene="exoT" /locus_tag="PA0044" /note="A family of actin-ADP-ribosylating toxin. A member of the Bacillus-prodiced vegetative insecticidal proteins (VIPs) possesses high specificity against the major insect pest, corn rootworms, and belongs to a classs of binary toxins and regulators of...; Region: VIP2; cl00173" /db_xref="CDD:469640" misc_feature order(59608..59610,59647..59649,59749..59751,59821..59829, 59863..59865,59938..59940,59965..59967) /gene="exoT" /locus_tag="PA0044" /note="active site" /db_xref="CDD:238144" misc_feature 59647..59649 /gene="exoT" /locus_tag="PA0044" /note="conformational flexibility of ligand binding pocket [active]" /db_xref="CDD:238144" misc_feature order(59923..59925,59932..59934,59938..59940) /gene="exoT" /locus_tag="PA0044" /note="ADP-ribosylating toxin turn-turn motif [active]" /db_xref="CDD:238144" protein_bind complement(59580..59592) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0044" /bound_moiety="AmrZ" protein_bind complement(59591..59603) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0044" /bound_moiety="AmrZ" gene 60656..61342 /locus_tag="PA0045" /db_xref="GeneID:878300" CDS 60656..61342 /locus_tag="PA0045" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248735.1" /db_xref="GeneID:878300" /translation="MSHSAKKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPY SGVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTILITHLQQTNRFNVLDRDNMSE IQQEAAIKGQAQRLKGADYVVTGDVTEFGRKEVGDRQLFGILGRGKSQIAYAKVALNI VNISTSEVVYSTQGAGEYALSNREVIGFGGTASYDSTLNGKVLDLAMREAVNKLVNAV DSGAWKPQNQ" misc_feature 60656..61339 /locus_tag="PA0045" /note="Curli biogenesis system outer membrane secretion channel CsgG [Cell wall/membrane/envelope biogenesis]; Region: CsgG; COG1462" /db_xref="CDD:441071" gene 61373..61726 /locus_tag="PA0046" /db_xref="GeneID:878290" CDS 61373..61726 /locus_tag="PA0046" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248736.1" /db_xref="GeneID:878290" /translation="MSKTITWTAALLGSMALAGCSGPKTLYQWEGYQAQVHEYFKGES KEAQAQALEADLEKIRAKNGAVPPGYHAQLGLLYSSIGKDDQMVREFETEKALFPESA TYMDFLLNNARGGAR" misc_feature 61373..61723 /locus_tag="PA0046" /note="Uncharacterized conserved protein, DUF4810 domain [Function unknown]; Region: COG4259" /db_xref="CDD:443401" gene 61879..62388 /locus_tag="PA0047" /db_xref="GeneID:877928" CDS 61879..62388 /locus_tag="PA0047" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248737.1" /db_xref="GeneID:877928" /translation="MKATYSMLSQVTFPLAEAGYYVVPVALADETFRQNGLTSAGDVH QVSPAKLREIYGADAALYVTVSDYGTRYMVISSATIVTASAKLVDLRSGTTLWTGSAT ASSEEGNGGNNGGLVGMLITAAVKQIINSSVEDAGYPIAGMTSARLLSAGQPGGLLYG PRSPRYGSD" misc_feature 61882..62364 /locus_tag="PA0047" /note="Putative bacterial lipoprotein (DUF799); Region: DUF799; cl01813" /db_xref="CDD:470356" gene complement(62403..62786) /locus_tag="PA0048" /db_xref="GeneID:877666" CDS complement(62403..62786) /locus_tag="PA0048" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248738.1" /db_xref="GeneID:877666" /translation="MSFAQNLLRLRQQNALTQRQMAERLGITVSQLRHFETKGGHPSL VVLQTIAGRFAVPLDWLVCERSERQALPEDLRLQFEAIGRLRLDERRAIRALLDDLIR QYMAKRNAAAKPLPAACAEATETSP" misc_feature complement(62577..62786) /locus_tag="PA0048" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" gene complement(63068..64729) /locus_tag="PA0049" /db_xref="GeneID:877595" CDS complement(63068..64729) /locus_tag="PA0049" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248739.1" /db_xref="GeneID:877595" /translation="MRYARHASRYSLFTLAVSAALLPGAGWAANGDLAGARKPPSVAC SWNREAALSYEERRLDTPLPFSGANVVTHDQTPLAERIVKGAGFDGFEPAFAKRLCAA DGRTPVTSYAKALKLVTEEGRALWRAAVDRAQGRRAIPAGALPASDDRMLYWTRLYMT RTLRQWAPSFHLGKAQAQALQWRFERASRGQLDIDLPRRYAADGSRYRRMIISGFDVF TLGTPGTANTGLRNGNPSGATALALDGREFRLADGSLLRIEAYLLPVSYDPFNRGMQE DTLGPWFRPGPRRVDASITISQGGANQFWLEAWNGRFHGSSAGNDGIVYCPADSALPN YVLPLGSVTNPGTAPISLRGSGCNINPPRRWLGYDSASRWRQNLPAQFSKASLPVRQL LAADTWRGIERPPGATSQAAEGFDVTWHTNYDFFPDCANPRTENVPTNGVMNAMPDPS LVLPPNRRICARNGGGGDYLSNESAYRNTVLRDAFRLEIPAGHIHVPVMNNYYTGVPA SGGGARNDNAISDARYEAYRSAIVAQTRALLVGVGNALAQGAQAD" misc_feature complement(63233..64108) /locus_tag="PA0049" /note="Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) [Posttranslational modification, protein turnover, chaperones]; Region: Pcp; COG2039" /db_xref="CDD:441642" gene 65339..65479 /locus_tag="PA0050" /db_xref="GeneID:878575" CDS 65339..65479 /locus_tag="PA0050" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248740.1" /db_xref="GeneID:878575" /translation="MKRKMLAASLLLWMFSLTAQADCAVLGPGEDPCAGPVLGPTVCE CP" gene 66303..68135 /gene="phzH" /locus_tag="PA0051" /db_xref="GeneID:878637" CDS 66303..68135 /gene="phzH" /locus_tag="PA0051" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phenazine-modifying protein" /protein_id="NP_248741.1" /db_xref="GeneID:878637" /translation="MCGLAGWVDYTRKLDDEFPAIFAMTDTLALRGPDAEGIWKHRNA LLGHRRLAVIDLSGGVQPMSYRFPTGQEVTLVYTGEVYNHDALRERLRRAGHEFRTRS DTEVVLHAYLQWGERCCEYLTGMFAFAVFDGRDGHLLLVRDRLGIKPLYYARHREGLL FGSEIKSILAHPEFAARLDAVGLVDLLTLSRGTSQTPFREVQELLPGHLLSWRPNSQA KLRRYWEVRRQEHADDLQSTVQRTRELVTRALGAQLHADVPVCSLLSGGLDSTALTGI AQRIAKAEHGGDINSFSVDFVGQAEQFRSDDLRPDQDQPFALLAAQYIGSRHRTVLID NAELVCERAREEVFRAKDVPFTFGDMDTSLHLMFGEIRRHSTVAISGEGADELFGGYG WFRDPQAVAAARFPWASRVRLPAGFIDAGFNRRCDLLQYQQASYDDGLRQVEHLAGDS PEERRMREFSHLHLKRWMVLLLERKDRLSMCNGLEVRVPYTDHELVEYVYNVPWSIKS RDGEEKWLLKRACADYVPEAVLKRRKSPYPTSANLGYERFLRGSVRRLLEDAVNPVFG IVSREFLAAELEHPEGYFNTQVSRHNLETALALEGWLRLYGLSA" misc_feature 66303..68120 /gene="phzH" /locus_tag="PA0051" /note="Asparagine synthetase B (glutamine-hydrolyzing) [Amino acid transport and metabolism]; Region: AsnB; COG0367" /db_xref="CDD:440136" gene complement(68188..68616) /locus_tag="PA0052" /db_xref="GeneID:877739" CDS complement(68188..68616) /locus_tag="PA0052" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248742.1" /db_xref="GeneID:877739" /translation="MDLRPSHVHVFPPSRDLPAATSPHRETLLRSGCAWNGSLYLGYP LGQPQLTVQRLSLAAHERLDWQVHPMPSALYVLKGELRLETRDGAQSTRVLEGEAAGC LMNIIHRLIAGAEPVEALLFHAGVEGMPVGLGERGEMPDA" misc_feature complement(68227..68535) /locus_tag="PA0052" /note="Chromobacterium violaceum CV2614 and related proteins, cupin domain; Region: cupin_CV2614-like; cd02236" /db_xref="CDD:380364" gene 69056..69526 /locus_tag="PA0053" /pseudogene="unknown" /db_xref="GeneID:878009" gene complement(69543..70091) /locus_tag="PA0054" /db_xref="GeneID:878088" CDS complement(69543..70091) /locus_tag="PA0054" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="RNA 2'-phosphotransferase-like protein" /protein_id="NP_248744.1" /db_xref="GeneID:878088" /translation="MDRKTLDDTSKFLSYVLRHQPEAIGLTLDGEGWADIDALIAGAA RDGRALDRMLLGAVVENNDKKRFALSADGQRIRAVQGHSHAAVAIAYAPAVPPAVLYH GTASRFLDSIRERGLVPGSRHHVHLSARRATALEVGRRYGSPVLLEIDARDMHLAGHL FHQAENGVWLTERVPVRFIREA" misc_feature complement(69546..70091) /locus_tag="PA0054" /note="RNA 2'-phosphotransferase; Reviewed; Region: PRK00819" /db_xref="CDD:179136" gene complement(70130..70636) /locus_tag="PA0055" /db_xref="GeneID:877862" CDS complement(70130..70636) /locus_tag="PA0055" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248745.1" /db_xref="GeneID:877862" /translation="MSLSIYQASIPTFLRTLGNLSAILKKAAAHAEAKNIDPRIFIDA RLAPDMFPLARQVQIASDAAKGAGARLAGLEVPSYADTETTFDELQARIARTVEFLEG IREEQLDGAEERNVTLKVRGQEISFNGRDFLFGFALPNFFFHVTTAYAILRHNGVELG KMDFLGGA" misc_feature complement(70136..70636) /locus_tag="PA0055" /note="Uncharacterized conserved protein, DUF1993 domain [Function unknown]; Region: COG3812" /db_xref="CDD:443024" gene complement(70702..71622) /locus_tag="PA0056" /db_xref="GeneID:877984" CDS complement(70702..71622) /locus_tag="PA0056" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248746.1" /db_xref="GeneID:877984" /translation="MDRLTATRVFVEVIDSGSQTAAAERLDMSRAMVSRYLAELEEWV GARLLHRSTRRLSLTDAGAELLPQCREMLAVADAMQATGQTRRDSPRGTLRITSSLSF AQAWLTRAAAAFVERYPGTAIDLQVNSQVVNLVEERIDLALRIANQLDPNLIARRLGE CRSVICAAPDYLRRHGTPRRPEDLALHNCLTYSYFGRSLWQFERDGEPTSVPVGGSLS ANESTVLLEAAAAGAGISQQPLYSAAPLIRSGRLVALLPEWSPQVLGIHAVYASRRQM PPALRALLDFLVERMAADPHWDEAGPLALA" misc_feature complement(71437..71601) /locus_tag="PA0056" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(70762..71349) /locus_tag="PA0056" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature complement(order(70825..70827,70906..70908,70957..70959, 71140..71142,71146..71148,71188..71190,71305..71307, 71317..71319)) /locus_tag="PA0056" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature complement(order(70930..70932,70939..70944,70963..70977, 71059..71061,71242..71262,71266..71268,71278..71280, 71287..71292,71296..71301,71311..71316)) /locus_tag="PA0056" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 71730..72617 /locus_tag="PA0057" /db_xref="GeneID:878150" CDS 71730..72617 /locus_tag="PA0057" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248747.1" /db_xref="GeneID:878150" /translation="MSRHGLLRSLFAAAALLGAAGVFAASAEPLRLEVYNPGEKAIFA VSSELLVGQREAMLIDAQFSRADAEQLVKRIQASGKTLSTIYISHGDPDFYFGLDVLK AAFPEAKILATAQTVAHIQATKDAKLAYWGPILKDNAPTSLVVPEPLKGDQLKLEGHA LKVVDLKGPSPDRTVLWIPSLKTVVGGVLVESGSHVWTADTQTQASRQAWVAMLDRIE ALQPRRVVPGHFTGEEPKGLDGVRFTRDYLKALEAELPKARDSAALVEAMKRRYPNLP GEEGLELSAKVLKGEMQWP" misc_feature 71796..72611 /locus_tag="PA0057" /note="Vmh family MBL fold metallo-hydrolase; Region: MBL_fold_Vmh; NF040580" /db_xref="CDD:468554" gene 72680..73384 /locus_tag="PA0058" /db_xref="GeneID:880931" CDS 72680..73384 /locus_tag="PA0058" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248748.1" /db_xref="GeneID:880931" /translation="MNDLTLHYLYDPLCGWCYGASPLLAAACEVTGLDVRLHGGGMMT DANRQPVGAGLRHYVMPHDLRIAQLTGQPFGKDYFDGLLRDTSAVFDSAPPTAAVLAA EALDGLGAAMLARIQRAHYVEGRRIAERPVLLELGAELGLGEGFAEAFDACSGEPLRA HFADSRRLMNRLGAAGFPTFALERDGRLQVLDTGRYLGQPDDWRAFLETQLRLAGGSG AVGGAAAPLCRIDGCA" misc_feature 72692..73309 /locus_tag="PA0058" /note="Predicted protein-disulfide isomerase, contains CxxC motif [Posttranslational modification, protein turnover, chaperones]; Region: COG3531" /db_xref="CDD:442753" gene 73468..73923 /gene="osmC" /locus_tag="PA0059" /db_xref="GeneID:878070" CDS 73468..73923 /gene="osmC" /locus_tag="PA0059" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="osmotically inducible protein OsmC" /protein_id="NP_248749.1" /db_xref="GeneID:878070" /translation="MSIHSSGGVDMKKTASAVWQGGLKDGKGTLSTESGALKDNPYGF NTRFEGAPGTNPEELIGAAHAGCFSMALSMMLGEAGLTAERIETRAEVTLDKQSDGFA ITAVHLVLRARVPGADAQTFEQIANKAKAGCPVSKVLNAKISLDASLDG" misc_feature 73504..73905 /gene="osmC" /locus_tag="PA0059" /note="peroxiredoxin, OsmC subfamily; Region: osmo_induc_OsmC; TIGR03562" /db_xref="CDD:274650" gene 74034..74267 /locus_tag="PA0060" /db_xref="GeneID:880900" CDS 74034..74267 /locus_tag="PA0060" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248750.1" /db_xref="GeneID:880900" /translation="MKTIGLGIATLLFSATALAAPKPCEELKAEIETKIQSAGVTSYT LEIVRNDEVSDPNMVVGSCENGTKKIIYQKNDD" misc_feature 74103..74255 /locus_tag="PA0060" /note="Protein of unknown function (DUF1161); Region: DUF1161; pfam06649" /db_xref="CDD:429051" gene complement(74279..74716) /locus_tag="PA0061" /db_xref="GeneID:877992" CDS complement(74279..74716) /locus_tag="PA0061" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248751.1" /db_xref="GeneID:877992" /translation="MRPLTRLVPLALLLLAGCAGPLPQPDPQMAWVELRSAPANTLLA ERLDGERLSDGRYFQVTPGRHVLEVRFQYELYGGSGGGGGGFGEPVQINCYQQVVYDG FEAGRRYRLEVRPQLRRALALLSDERGEVVARSNFQTSRCPPY" gene complement(74773..75189) /locus_tag="PA0062" /db_xref="GeneID:878228" CDS complement(74773..75189) /locus_tag="PA0062" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248752.1" /db_xref="GeneID:878228" /translation="MRTLLLAGGLLVLSGCSLLMPTPDPNRAWVDLDTQPDADLAAVE VDDKSWDRTRYFEVDPGTRELTVRYQFTVDPTNIGPVDSPLWRDCQLNLKFKDFSAGQ RYRLEAGHIGFRPWAKLYDQDNRELARGREGRCAKV" gene 75281..76408 /locus_tag="PA0063" /db_xref="GeneID:877630" CDS 75281..76408 /locus_tag="PA0063" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248753.1" /db_xref="GeneID:877630" /translation="MLVGRRAVRVLCYVPPMPRRLRHPLADLRLPRWVPCLALLALSG CSTVSYYGQLASGQFALLRAREPAAAVIADPQRDARLRERLAKAEKARQFASERLGLP DNRSYRLYADIGRPYVVWNVFATPELSLQPVTHCFPIAGCVAYRGYYSEAAARAEAAR QRALGDDVYVGGVQAYSTLGWFDDPILSSMLRWDDERLATLIFHELAHQKFYLRDDTA FNESFATFVEQEGTRQWREYRGLPPADGREEKRREQFTALVLASRARLEALYAGPLDD AAKRAGKAAEFQRLRREYAALSQREWGGESPFKAWIDAPFNNAKLLPFGLYDQWVAAF AVLFRQVGGNWPAFYARVRALGQLPLAERQAALQRLAAAAP" misc_feature 75425..76366 /locus_tag="PA0063" /note="Putative aminopeptidase; Region: Aminopep; pfam10023" /db_xref="CDD:430995" gene complement(76416..77399) /locus_tag="PA0064" /db_xref="GeneID:878385" CDS complement(76416..77399) /locus_tag="PA0064" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248754.1" /db_xref="GeneID:878385" /translation="MTDNPFATPTAPVQPPAREVPATTQPYAFIAVLALVTCLSFAVS LGIQWYNDIGEIRQRFSEHLQLMAPHWFTGLVFYAAANLLVLHAYREKRQLVEFRPLA LLLIGYGLLNLVCGMLAGIGLAPLTLPFYQWVTAQSSYGVWLMAFNEAMSWVYLLLGS LLPLGLVLLGSRVNSPRLAEGEEARVAAWQVALGAALCFATLCFKLMQFLPYALLRYD EPWLYGLYLSGVALPAALLFGAVCTRLPARLQRFAAGRALLLAVVAMLLWSVALLAVG GGLALLMILGLAPAGIGYTLLVALLGVGLLALLWPIGRLATRWCYADQLAA" gene complement(77432..78097) /locus_tag="PA0065" /db_xref="GeneID:878495" CDS complement(77432..78097) /locus_tag="PA0065" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="5'-nucleotidase" /protein_id="NP_248755.1" /db_xref="GeneID:878495" /translation="MRDAALRYPNILFDLDGTLTDPREGITRSVQFALARLGIDEPDL ARLEHFIGPPLLQCFMQTYGFDEARAWEAVNHYRERFRVTGLYENRVFDGIPELLEAL VGRGHTLYVATSKPGVFAREIARHFAFDRHFKAIYGSELDGTRTHKEELIRHLLDSEG LAAEHCLMIGDRMHDLLGASRNGVACIGVGYGFGSEDELRAHQPTHYCADLAALRQVL ESH" misc_feature complement(77444..78070) /locus_tag="PA0065" /note="haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065; Region: HAD_5NT; cd04302" /db_xref="CDD:319798" misc_feature complement(order(77573..77578,77585..77590,77654..77656, 77756..77761,78044..78058)) /locus_tag="PA0065" /note="active site" /db_xref="CDD:319798" gene complement(78090..78632) /locus_tag="PA0066" /db_xref="GeneID:879179" CDS complement(78090..78632) /locus_tag="PA0066" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248756.1" /db_xref="GeneID:879179" /translation="MTIRSYQGKTPLLGERVFVDPSAVLVGDIEIGADSSVWPLVVIR GDMHRIRIGQRSSIQDGSVLHITHAGPFNPDGFPLSIGDEVTVGHKVLLHGCSIGNRV LVGMGSIVMDGAVIEDEVILGAGSLVPPGKVLESGFLYVGSPAKKARPLSDKERGFFA YTAGNYVKLKDLHIAEDYHA" misc_feature complement(78105..78632) /locus_tag="PA0066" /note="Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily [General function prediction only]; Region: PaaY; COG0663" /db_xref="CDD:440427" gene 78710..80755 /gene="prlC" /locus_tag="PA0067" /db_xref="GeneID:878482" CDS 78710..80755 /gene="prlC" /locus_tag="PA0067" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="oligopeptidase A" /protein_id="NP_248757.1" /db_xref="GeneID:878482" /translation="MSANPLLQAYDLPPFSSIRPEHVKPAIERILADNRAAIARLLET QREQPTWKGLVLAMDELNDRLGAAWSPVSHLNAVCNSAELREAYEACLPELSAYSTEL GQNRALFEAYEALAKSPEAAGFDVAQKTILEHALRDFRLSGIDLPADKQKRYAEVQSR LSELGSRFSNQLLDATQAWTKHVTDEAALAGLTDSAKAQMKQAAEAKGLDGWLISLEF PSYYAVMTYADDRALREEVYAAYCTRASDQGPNAGQNDNGPVMEEILDLRQELAGLLG FANYAELSLATKMAESSDQVLSFLRDLAVRSKPFAARDLEQLRAYAAEQGCTELQSWD AGYYAEKLREARYSVSQEALRAYFPVDKVLSGLFAIVERLYGIQIRELHDFERWHADV RLFEILENGEHVGRFYFDLYARANKRGGAWMDGARDRRRDAQGRLIDPVAYLVCNFTP AVNGKPALLTHDEVTTLFHEFGHGLHHLLTRVEHAAASGINGVAWDAVELPSQFMENW CWEPEGLALISAHYETGVALPQDLLEKMLAAKNFQSGMMMVRQLEFSLFDFELHATHG DGRSVLQVLEGIRDEVAVMRPPAYNRFANSFAHIFAGGYAAGYYSYKWAEVLSADAFS RFEEEGVFNPDTGRAFREAILARGGSREPMLLFVDFRGREPSIDALLRHSGLVGEAA" misc_feature 78710..80746 /gene="prlC" /locus_tag="PA0067" /note="Zn-dependent oligopeptidase, M3 family [Posttranslational modification, protein turnover, chaperones]; Region: Dcp; COG0339" /db_xref="CDD:440108" gene 80752..81027 /locus_tag="PA0068" /db_xref="GeneID:878318" CDS 80752..81027 /locus_tag="PA0068" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248758.1" /db_xref="GeneID:878318" /translation="MSPAITRKRFIAGAVCPACSEQDKIQMWEEDGVPHRECVACGYA DTLNAQGQSIPKELGTRVNQNAPKPANPKVQSVQFFPNPKLKKKPDA" misc_feature 80767..80991 /locus_tag="PA0068" /note="Probable metal-binding protein (DUF2387); Region: DUF2387; pfam09526" /db_xref="CDD:430664" gene 81116..82174 /locus_tag="PA0069" /db_xref="GeneID:878366" CDS 81116..82174 /locus_tag="PA0069" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248759.1" /db_xref="GeneID:878366" /translation="MSAPLPPRGRGTASNPLNRFAPTHSEAFDDGWEQDVPPIQLTEV REEIARTVISRNQSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGIDFETRLI AKSNVASALEQELSKPGYRCAPINLGANTDPYQPLERERRLTRQVLEVLLRFRHPLTI VTKGSLILRDLDLLRELAEQNLVAVMISLTTLDDELKRILEPRAAAPSARLRAIRTLS GNGIPVGVLCSPMIPMVNDMELERLLQAARDAGARSAAYMLLRLPREVGPLFEEWLAA HYPQRAEHVMSLVRQCRGGEVYDSRFGHRFRGQGPFADLLAQRFAVAMKRLGLDRREG FGLDCSRFAVPGAQMALF" misc_feature 81137..82171 /locus_tag="PA0069" /note="DNA repair photolyase [Replication, recombination and repair]; Region: SplB; cl41371" /db_xref="CDD:477603" gene complement(82404..83318) /locus_tag="PA0070" /db_xref="GeneID:879190" CDS complement(82404..83318) /locus_tag="PA0070" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248760.1" /db_xref="GeneID:879190" /translation="MSQPSENRLITSARYALCLLTASGVLLSGCASSGVGSVAQTTRA EYYPSCYEPVSHLRSTDNAVRNSAITGAITGGLLGGLAGGLASDENRGRNAALAAAGG ALAGGAAGYYMEKQKQISDDRARIGSYGTDVDRSTVEINRSVAYAKSAQSCYQSQFKA LLDGRKNKSINEAEGRKRLAEIVSGLQETNALLVAANGRAGENISNYTQAYEKDLQQV GVPRAEVTKVAEAENRASTTKGGSKPKTGSNPKVPKEAVATEQTIRKAQDAQSEGNKV ASQGQGMIREVCNSPDMGDWAPPSCAKA" misc_feature complement(82407..83291) /locus_tag="PA0070" /note="type VI secretion system-associated lipoprotein TagQ; Region: VI_TagQ; NF041250" /db_xref="CDD:469152" gene complement(83380..85092) /locus_tag="PA0071" /db_xref="GeneID:879195" CDS complement(83380..85092) /locus_tag="PA0071" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248761.1" /db_xref="GeneID:879195" /translation="MFEKAILPLALGACLAFAAPAWAEGDSPDNPKPLADDVALPLPC GGEMVFRHVYVLAEGALDDREVNLGYAFNEGEAGYQQSFISGYRRDYVNGQFSLADLA PAWQQKLSASLPKPAAGTPLKPMLYFIGKYEVTARQYAAVMSQAAALSGQGEAPACDV PDGMAARLPKVNLSRFDAERFGAVYSAWLLKNHPELLPVSGRGKNPEDGGIGFVRLPT EVEWEFAARGGQAVSRQELEGRLFPRKVEGSDQEGPLGDWAVYNQVAGGTGQAARLLP VGMKRPNPLGLFDVIGNAAEMVQESFQLVHAGRRQGTYGGFVVKGGNYLEGEMTLFTG MRREYPLFAADGSEQRNETTGFRVAIGALSAPRSRYPELFAQWQKEGRLAALTDAIDD AQDPTKQLDGIIAATRDPQMQAQLAQINEELKRNVSLIARQREEAAGNLIQSAALVAE TINNYNIRLTNLKKDREKAVAARDQATAQLYAGAIANGRSALDGALAIYIDNLATGTR YTDAVIQAQFQRIQEELNRNPVLGKSLVKRATLFVKHVGDYRQQHRAEPEAVLKELLA SSGR" misc_feature complement(84007..84714) /locus_tag="PA0071" /note="Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones]; Region: YfmG; COG1262" /db_xref="CDD:440874" gene complement(85085..86284) /locus_tag="PA0072" /db_xref="GeneID:879189" CDS complement(85085..86284) /locus_tag="PA0072" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248762.1" /db_xref="GeneID:879189" /translation="MRAGLLLSLAWADYRGEARLSLCAIFALAAVITPLLVLFGLKYG LVSTLTERLERAPSVREIIPVGGARYRAEDIAALAARADVAFAVPRTRQIAATADLSG GGETALSVEMIPSAAGDPLLAGLPQPDRPTRVVLSHGAAEKLGAQPGERIVARIGRRM DGQAQSQRLELEVLAVLPQERFARDALFAPLALLEAAEDYRDGRAVAAYGWPGKAGET PRARIYPGFRLYARDLDAVEGLRRHFVASGVEVATQAEAIAQVRSLSRNLGLVFWIVA ALAIGGAFAAIAASSLAAVERKRRALAVLRLLGFPTAALVGFVMLLALFSAVFGLFLA GLLYAATAGALNHLFDNQSGEFVCRLLPSHYLTALLATLLCSVLAAASGGWRAARIEA AEGLRDV" misc_feature complement(85094..85885) /locus_tag="PA0072" /note="ABC-type transport system involved in lipoprotein release, permease component LolC [Cell wall/membrane/envelope biogenesis]; Region: LolE; COG4591" /db_xref="CDD:443648" gene complement(86284..87003) /locus_tag="PA0073" /db_xref="GeneID:878396" CDS complement(86284..87003) /locus_tag="PA0073" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_248763.1" /db_xref="GeneID:878396" /translation="MILRLHEVARSHGAGRQRYRLRVPALELRAGRQLAIVGPSGCGK STLLDLLALALAPDPGGRFEFLAGERPQDIAALWRDGRQDRLAALRRQHCGYVLQSGG LLEFLDVRRNIGLPCALLGAPSAERVQALAERLEIGDQLDKKPAALSVGQRQRVAIAR ALAHAPRLLLADEPTAALDPLNAERVMRLLVEQARERGACTVVATHDERLARAAGLEV LAIRWQREADDSVGACLEEVG" misc_feature complement(86362..87000) /locus_tag="PA0073" /note="ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]; Region: LolD; COG1136" /db_xref="CDD:440751" gene complement(87000..90098) /gene="ppkA" /locus_tag="PA0074" /db_xref="GeneID:879361" /db_xref="PseudoCap:PA0074" CDS complement(87000..90098) /gene="ppkA" /locus_tag="PA0074" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="serine/threonine protein kinase PpkA" /protein_id="NP_248764.1" /db_xref="GeneID:879361" /db_xref="PseudoCap:PA0074" /translation="MDIELPGFDIERELGEGAMATVYLATQRSLQRKVALKVMAAALA ADPSFAERFLREGRTLARLSHPNTVTIHDIGNVGSCYYMAMEYLPNGTLKERIQQGLD PEQGLAYVRQVAAALGYAHSQGLVHRDVKPANILFRADGTAVLSDFGIAKSIEDNTQF TQVGFAVGTPSYMSPEQARGQEIDGRADLYALGVVLYEILTGKLPYNGKDSLSTALAH LTEPLPELPIEQGRYQDILRQLLAKDPAERFPTAGALIAALDRLAPSALEATQIRPLA TPQGSPRASNPPPAEPAPLPPADLGGLQPVSIQLPPVTPSAGGATPPPPPPSQAAKPP SPPPPPLPPAKPRAGGSRTPLIAAAAAAVLLAIGGGAWWLLGSGDAPSAADPAPLGQT PADKPQQQTPVADAEQDGGERPLLMPGKKTLFQRVLTKPGAAISAEAGGPPRAGAVPA FSVLYVYARKQVGGSPWLRVGASSNGEGDGWLPASAVSDWKQSLVLKFTERSGRAPVM FLNSAEQVERLLGDTRAARDTLTQAVDHKGDPQVVAVEPNDRAIPQDQFYLLPIFDSK ESFDADGQPAQLLEVASIDPGGSAAAPQAPGQAGQGGASGAASDTFRTGIVLVVDTSV SMQPYIDRVREVIDGLQRQIGERGDLDKVSFGLVGFRNNTDKTPGLEYVSKTLVPLQP GNDAQRFAELSSQVRATDVSSHSFNEDAFAGIMQAVDEMDWSPYAGRVVLLVTDAGAL RKNDPLGRTQMNEAEVRQAALRKGVKIYALHLRTPAGKNNHGYAEQQYRSLTADANPK IADLYIPVAGGEVNAFGNTVKEIGTVFADLVHDAGNRKPQAPRFDAAPSVASKSAAIG YAMQMEFLGRRDPVRAPQVVTAWTADRDLTNPALPAFQVCVLLSKLQLNELQQSLKLI VDAAKRTQTSPKDFFQEIASASAYMSRDPAQLVKGSNLAQSGVLGEYLEGLPYRSKSL NMTQDLWLSLSVAEQQDFIDELESKIRLYETFHNDVANWVRFGDADAGDALYRVPLST LP" misc_feature complement(89316..90080) /gene="ppkA" /locus_tag="PA0074" /note="Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; Region: STKc_PknB_like; cd14014" /db_xref="CDD:270916" misc_feature complement(order(89841..89843,89877..89888,89901..89903, 89916..89918,90003..90008,90078..90080)) /gene="ppkA" /locus_tag="PA0074" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:270916" misc_feature complement(order(89586..89597,89649..89651,89658..89663, 89691..89693,89697..89702,89706..89708,89712..89714, 89817..89819,89823..89825,89835..89846,89892..89894, 89988..89990,89994..89996,90033..90035,90039..90050, 90054..90059)) /gene="ppkA" /locus_tag="PA0074" /note="active site" /db_xref="CDD:270916" misc_feature complement(order(89658..89663,89691..89693,89697..89702, 89706..89708,89823..89825,89835..89846,89892..89894, 89988..89990,89994..89996,90033..90035,90039..90050, 90054..90059)) /gene="ppkA" /locus_tag="PA0074" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270916" misc_feature complement(order(89586..89597,89649..89651,89700..89702, 89706..89708,89712..89714,89817..89819,89823..89825, 90045..90047)) /gene="ppkA" /locus_tag="PA0074" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270916" misc_feature complement(order(89586..89609,89637..89663)) /gene="ppkA" /locus_tag="PA0074" /note="activation loop (A-loop); other site" /db_xref="CDD:270916" misc_feature complement(87708..88253) /gene="ppkA" /locus_tag="PA0074" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cd00198" /db_xref="CDD:238119" misc_feature complement(order(87891..87893,87984..87986,88236..88238)) /gene="ppkA" /locus_tag="PA0074" /note="metal ion-dependent adhesion site (MIDAS); other site" /db_xref="CDD:238119" gene complement(90106..90834) /gene="pppA" /locus_tag="PA0075" /db_xref="GeneID:879341" /db_xref="PseudoCap:PA0075" CDS complement(90106..90834) /gene="pppA" /locus_tag="PA0075" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="serine/threonine phosphatase" /protein_id="NP_248765.1" /db_xref="GeneID:879341" /db_xref="PseudoCap:PA0075" /translation="MVPNSVSYYRSASYSHVGMVRKVNEDASLDAPEAGLWVVADGMG GHAAGDFVSSLIVDTLRRIPAASSLPAYVGALRTGLAQVNERVRQEAGLRGVSVMGST LVLLAARGNQASCLWAGDSRLYRLRGGVLEAISRDHSYVQELLDNALISEEEARHHPR ANVVTRAVGVHEQLELSEAALHVLPGDSFLLCSDGLNKTADDSELRDVLSHSDPYAVV RSLVHLGLTRGAPDNITALVVRAF" misc_feature complement(90112..90810) /gene="pppA" /locus_tag="PA0075" /note="Serine/threonine protein phosphatase PrpC [Signal transduction mechanisms]; Region: PTC1; COG0631" /db_xref="CDD:440396" gene complement(90844..91524) /locus_tag="PA0076" /db_xref="GeneID:879335" CDS complement(90844..91524) /locus_tag="PA0076" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248766.1" /db_xref="GeneID:879335" /translation="MNSVGFYGKLAGRGDFVSRGLPNTFVEPWDAWLASGMRASQDEL GAAWLDAYLTSPLWRFAIAPGLLGGEAVTGVVMPSIDRVGRYFPLTVACLLPANADLG GLVGGDDGWFEQVESLLLSTLEPEAEVEAFEQAVAQLPAPPCGPRIEQSLISGNLLRS EAVTPAQRLAALAQHACDGASHWWGRGSARISAGLMRYQGLPPAPAFGRFLTGEGEVI PLFPGIPG" misc_feature complement(90883..91521) /locus_tag="PA0076" /note="Regulator of T6SS expression TagF, TagF/ImpM/SciT family (unrelated to teichoic acid polymerase TagF of B.subtilis, COG1887) [Signal transduction mechanisms, Intracellular trafficking, secretion, and vesicular transport]; Region: SciT; COG3913" /db_xref="CDD:443118" gene complement(91521..94826) /gene="icmF1" /locus_tag="PA0077" /db_xref="GeneID:879396" /db_xref="PseudoCap:PA0077" CDS complement(91521..94826) /gene="icmF1" /locus_tag="PA0077" /note="'Product name confidence: class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in, if known).'" /codon_start=1 /transl_table=11 /product="type VI secretion protein IcmF" /protein_id="NP_248767.1" /db_xref="GeneID:879396" /db_xref="PseudoCap:PA0077" /translation="MQSLAEVSAPDAASVATAEELATLKQRMDEALALLKRAKLGGSE RRNLYELPWYVIIGPPGSGKTTALMNSGLDFPLAAQMGAGAIRGVGGTRNCDWWFTDE AVLLDTAGRYTTQDSHAQVDKAAWLGFLDLLKTQRKRRPIDGAFIAISLSDLLLGSDA ERAAHAQAIRARIQELYQQLGVRFPIYVMLTKFDLVPGFMEFFDSLNREERAQVWGMT FALDDGKSAEGPLAVFDSEFALLEQRLTARLVERLQQERDPARRDLVYGFPQQFAALR ECLGEFLNGVFKPNPYEERPLLRGLYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQ TGTGRSYFIERLFREVAFGERGLVGTNPKVERRRKWLTIGALSATALVVLAVTAVWIA SYRANQSYIAAVDQRVDPLARGIESLSPAQRDVLAVLPQLNAVQNLAGDAPSWAEGYG LYQGDMLGEESASVYRKLLIAVFAPRLVTRIEEQLRSGGSSDFLYEGLKAYLMLGSPD HYDADFIKAWISLDWERNLPRDLSPEQRQALHAHLDALLERRPPSARLDQDLVEDLRR QLQQLPVAQRVYDRVKRQRLPKDVPDFRISDAAGRDAPLVFARKSGKPLTDPLSGFFT YRGYREVFLTASLSQAGTIAEEQWVLGRDLNDAGDAANLALDVRRLYFQDYLRQWDDL LADLTVVPITNVTQAADVLRILSGPTSPFRKLLEAVARETDLQKGDRLVAAQVKKAAD GTVDKLKQRLGSLVGQEEEGAREQPRQVDSDPISAHFAELNSLVSKGEGGNEPAPIDS LLEDMNALYVQVSAMAGASGDSLLGDAKNQVAAAASRVALSAERQPPVVQGLVKNVVN STTSSMMGSVRNQLNAAWISDVVSVYRQSLAGRYPIAAGSSRDATLEDFGHFFGAGGV MDSYFRQYLQPYVDTSASTWRWQPGAAQKLGINPGVLHTFQRAAAIRDAFFRSGGMQP TVRFELKPVTMDAAISQFILDLDGQQLTYDHGPSRPVAMQWPSANGLGVVRLTVTPPP SSGRSGLTLEGPWAWFRLLDQSDLERGNSPDRFTLRLRIDGSSIACELRASSAFNPFK SRVVSGFSLPERL" misc_feature complement(91524..94826) /gene="icmF1" /locus_tag="PA0077" /note="Type VI protein secretion system component VasK [Intracellular trafficking, secretion, and vesicular transport]; Region: IcmF; COG3523" /db_xref="CDD:442745" gene complement(95048..96397) /locus_tag="PA0078" /db_xref="GeneID:879392" CDS complement(95048..96397) /locus_tag="PA0078" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248768.1" /db_xref="GeneID:879392" /translation="MPPIDDPFGTPAGGGNGSPPDDRTMIMPRPGGRAPEPAGGPRGG DPYTPPPMASLAPLSGRGDGLNPLEQAAGPLLAMLTRLRNTIAHPAPASLRAQLLGYL RQFEEKARQAGVAPDEVMLARYVLCTALDEAVLSTPWGSTSDWGKQSLLITLHNEAWG GEKVFQLLEHCLQNPHQRLHLLELLYLCTSLGFEGRYRVMHDGRSQLEALRERTAAVI RSTRGEYEHELSPHWRGLSVMRDRLSQYLPPWVGIAIGLALLLALLFGLRMKLAADAE PVFKRIHAIGEIPVQAIDRPAVQPRVIERPRLARFLADDIKAQRVAVEDAVDRSVVTI RGDELFASASASVRDEFQPLLLRIADALRKVKGQVLVTGHSDNRPIATLRYPSNWKLS QARAQEVADLLGATTGDAGRFTAEGRSDTEPVATNASAEGRARNRRVEITVFAEGAQ" misc_feature complement(95051..96394) /locus_tag="PA0078" /note="DotU family type VI secretion system protein; Region: PRK07033" /db_xref="CDD:180801" gene complement(96404..97738) /locus_tag="PA0079" /db_xref="GeneID:879382" CDS complement(96404..97738) /locus_tag="PA0079" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248769.1" /db_xref="GeneID:879382" /translation="MSWNNRVVWSEGMFLRPQHFQQHDRYLETLVDGRCRSLLAGGWG FSELKLDDALLTQGKLAIVSARGVLPDGTPFNIPADDPAPAPLNVEESLRDGIVYLGL PLKRVGTRDTVEEGEALGGARYVSQVQEVRDDNAAFESRAPVALGSQAFRLLTERDGL GEYAAVGVARVREKRADQALSLDEDYLPPVLDIAAAPPLASFAKELLGLLHQRGEALA GRVVASSAGGASEIADFLLLQLVNRAEALTGHLSRVRPLHPQELYRELVALAGEFCTF TASQRRPEEYPVYNHDDLAASFAPVMLALRQALATVIDAKAIAIPIVEKAYGVHVAML SDRSLIDNASFVLVVRADVPGESLRGHFPQQAKVGSVEHIRDLVNLQLPGIGLLPMPV APRQIPYHAGSTYFELDRGSAHWKQLTHSGGFAFHIAGQFPGLNLAFWAIRG" misc_feature complement(96407..97738) /locus_tag="PA0079" /note="Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]; Region: COG3522" /db_xref="CDD:442744" gene complement(97754..98218) /locus_tag="PA0080" /db_xref="GeneID:879436" CDS complement(97754..98218) /locus_tag="PA0080" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248770.1" /db_xref="GeneID:879436" /translation="MQKLIVALFGLLLAACSSSPPETPPTRVVIWLHAAPNLNPSAAG QAAPLRLRLYELKKDTAFGRADYFALTDNAQSTLGGDLVEQDEFLLRPGEERRIERTL DEQTRQLGFVAAYRDLDRATWRQVLDVPGQRTSHLDITLGAQAIGIVARPAP" misc_feature complement(97781..98170) /locus_tag="PA0080" /note="type VI secretion lipoprotein, VC_A0113 family; Region: VI_chp_3; TIGR03352" /db_xref="CDD:274535" gene complement(98263..99756) /gene="fha1" /locus_tag="PA0081" /db_xref="GeneID:879413" /db_xref="PseudoCap:PA0081" CDS complement(98263..99756) /gene="fha1" /locus_tag="PA0081" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="Fha domain-containing protein" /protein_id="NP_248771.1" /db_xref="GeneID:879413" /db_xref="PseudoCap:PA0081" /translation="MPLRLTITSYHKLTPGQCSEKVLDQGQLTIGRGPDNDWVLPDPE RLVSSRHCTILNRDGVYYLTDTSTNGVLLVNAGHRLRRGNSEPLQDGETVRLGEYDIL VQLGHDIALPGSGNPQTDPFTSFDALMSRQAAGSAPAFAEPAPTPHPAVTAHFQGGSP LDTKPDLFDFLTPPPPGAAPRPDHVPAEQHDFRPPEPVIPPPPATTPAPPPAGGAPLI PADWDPFAELLGNTPAPSATPVAQPLPTAEPTPLAMPFADPGITQQPQPQPQPQPQPQ PQPQPQPQPASVAAPTPPASAAASAGGDLLQAFLRGAGMTQLKVDPAGAEAQMEAIGR SYRGLVEGLVDVLRARASLKGEFRMAQTMIQPVQNNPLKFAPNVDEAMLLLLRRDNQA FMAPDRAVADSFEDLKAHQLAVMAGVQAAIRHLLARFEPAALEARFGKPAGLSGLLPG ARQAQNWDSFTELYAKILREAEDDFQELFGREFSRAYEEHSARLRRS" misc_feature complement(98281..99750) /gene="fha1" /locus_tag="PA0081" /note="type VI secretion system FHA domain protein; Region: VI_FHA; TIGR03354" /db_xref="CDD:274537" gene 100124..101158 /locus_tag="PA0082" /db_xref="GeneID:879402" CDS 100124..101158 /locus_tag="PA0082" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248772.1" /db_xref="GeneID:879402" /translation="MLDVPVLLAAVSPDSPCGDDLEYDAAFLELERIAQGQPERQMGD AVLPAEPPEWPRVRALASELFGRSKDLRVANLLLQSNVALDGLDGLADGLLLVRELLG QYWDGVYPLLDADDDNDPTFRINALTGLVAEPLLQLVWAIPLVRSRAFGPVNLRAALN AAGLQRFASETLSPEQIAGAFADADADALAATRRALDGAQEHALAIESGVAERVGSAQ GLDLGPLRQLLRQALQVFDLYGPQGAGESLAPGAEAVADEQVGAAPVAAVAAPAPRAS GEIANREDVLRQLDRLLEYYVRHEPSSPVPVLLKRAKTLVTADFAEIVRNLIPDGISQ FETLRGPESE" misc_feature 100127..101143 /locus_tag="PA0082" /note="ImpA, N-terminal, type VI secretion system; Region: ImpA_N; cl19907" /db_xref="CDD:450411" gene 101247..101765 /locus_tag="PA0083" /db_xref="GeneID:879476" CDS 101247..101765 /locus_tag="PA0083" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248773.1" /db_xref="GeneID:879476" /translation="MGSTTSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMA DLAGKPAEPQAAVADRKFLEIDVDNFDARLKAMKPRVAFNVPNVLTGEGNLSLDITFE SMDDFSPAAVARKVDSLNKLLEARTQLANLLTYMDGKTGAEEMIMKAIKDPALLQALA SAPKPKDDEPQA" misc_feature 101262..101762 /locus_tag="PA0083" /note="Predicted component TssA of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]; Region: TssB; COG3516" /db_xref="CDD:442738" gene 101778..103274 /locus_tag="PA0084" /db_xref="GeneID:879464" CDS 101778..103274 /locus_tag="PA0084" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248774.1" /db_xref="GeneID:879464" /translation="MAELSTENLAQGQTTTEQTSEFASLLLQEFKPKTERAREAVETA VRTLAEHALEQTSLISNDAIKSIESIIAALDAKLTAQVNLIMHHADFQQLESAWRGLH YLVNNTETDEQLKIRVLNISKPELHKTLKKFKGTTWDQSPIFKKLYEEEYGQFGGEPY GCLVGDYYFDQSPPDVELLGEMAKISAAMHAPFISAASPTVMGMGSWQELSNPRDLTK IFTTPEYAGWRSLRESEDSRYIGLTMPRFLARLPYGAKTDPVEEFAFEEETDGADSSK YAWANSAYAMAVNINRSFKLYGWCSRIRGVESGGEVQGLPAHTFPTDDGGVDMKCPTE IAISDRREAELAKNGFMPLLHKKNTDFAAFIGAQSLQKPAEYDDPDATANANLAARLP YLFATCRFAHYLKCIVRDKIGSFKEKDEMQRWLQDWILNYVDGDPAHSTETTKAQHPL AAAEVVVEEVEGNPGYYNSKFFLRPHYQLEGLTVSLRLVSKLPSAKEA" misc_feature 101832..103259 /locus_tag="PA0084" /note="Predicted component TssB of the type VI protein secretion system, VipA/VipB/TssB family [Intracellular trafficking, secretion, and vesicular transport]; Region: COG3517" /db_xref="CDD:442739" gene 103350..103838 /gene="hcp1" /locus_tag="PA0085" /db_xref="GeneID:879446" /db_xref="PseudoCap:PA0085" CDS 103350..103838 /gene="hcp1" /locus_tag="PA0085" /codon_start=1 /transl_table=11 /product="protein secretion apparatus assembly protein" /protein_id="NP_248775.1" /db_xref="GeneID:879446" /db_xref="PseudoCap:PA0085" /translation="MAVDMFIKIGDVKGESKDKTHAEEIDVLAWSWGMSQSGSMHMGG GGGAGKVNVQDLSFTKYIDKSTPNLMMACSSGKHYPQAKLTIRKAGGENQVEYLIITL KEVLVSSVSTGGSGGEDRLTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNV QA" misc_feature 103350..103832 /gene="hcp1" /locus_tag="PA0085" /note="Type VI protein secretion system component Hcp (secreted cytotoxin) [Intracellular trafficking, secretion, and vesicular transport]; Region: Hcp; COG3157" /db_xref="CDD:442391" gene 104006..104851 /locus_tag="PA0086" /db_xref="GeneID:879504" CDS 104006..104851 /locus_tag="PA0086" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248776.1" /db_xref="GeneID:879504" /translation="MADPSFASGRLGSRLQGSIAMIAEELLRAGRLDDALKALQEQVR SQPSNATLRIFLFQLLAVMGQWARAQNQLKVVGELDASALPMVQTYSTAIDCEALRRE VFAGRLTPVILGQPAEWIAPLLQALSLDAEGHGEAAQALREQAFDAAPAVPGRIGEAP FAWLADADTRLGPVLEVIVNGRYAWLPMSNLRSLKVEAPSDLRDLVWLPAELTLANGG ATVALLPARYAETVEHGDDAARLGRKTEWLDSGLPVGQRLFVTDAGETALFDLRELDF EPTDA" misc_feature 104066..104848 /locus_tag="PA0086" /note="Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only]; Region: ImpE; COG4455" /db_xref="CDD:443553" gene 104853..105362 /locus_tag="PA0087" /db_xref="GeneID:879495" CDS 104853..105362 /locus_tag="PA0087" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248777.1" /db_xref="GeneID:879495" /translation="MAELTLQERLQPSLLDRLTDDEPGNLKEAAERRVLTLNQLKASV LRDLAWLFNTTSLFDHGPAARMPAGNSVLNYGLPALAGHTASSVDVHAIEALLTETIA TFEPRIIRSSLRVRAQLLPGEMDHNALSFEIEGDLWAEPAPLRLLLTTNLDLETGHVR VAQGERRRT" misc_feature 104853..105335 /locus_tag="PA0087" /note="Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]; Region: COG3518" /db_xref="CDD:442740" gene 105359..107218 /locus_tag="PA0088" /db_xref="GeneID:879483" CDS 105359..107218 /locus_tag="PA0088" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248778.1" /db_xref="GeneID:879483" /translation="MNPRLLEYYNQELQHIRESAAEFAEEFPKIAGRLSLSGFECADP YVERLLEGFAYLTARVQLKLDAEYPTFTHNLLEIAYPHYLAPTPSMTVVQLRPDPNEG ALSSGFSIERGASLRGQLGPDDQTACEYRTAHPVTLWPLEVAQADYFGNPAAVLGRLA ASEPRAKAGLRIRLRSGAGIPFDSLSLDALPLYLHGADEQPYRLYEQLLGNACAVFVR APDNAWVERLPTSSLRARGFDDEDALLPVVPRAFQGYRLLQEYFALPARFLFVEFSGL NRALRRCHGEELELVVLFGKHDQRLEGTVDAEQLVPFCTPAINLFPRRCDRIHLSDRV NEHHVIVDRTRPLDFEVHSLQQVSGHGSGPEQPFQPFYAVRDPARYGREQAYFRVRRE PRVLSSKQRRKGPRSTYVGSETFVALVDANQAPYRHDLRQLGIAALCTNRDLPLFMPI GAHKSDFTLEDSAPVMQVRCLAGPSRPRASRAHDASAWRLISQLSLNYLSLAERGQGA AALRELLRLYGDSGDPALQLQIEGLREVSSKPCTRRLPMPGPIVFGRGLEITLDFDEN AFRGTGVFLLGAVFERFLARYVSINSFTETVLRTGERGEVMRWQAKPGSRPNL" misc_feature 105359..107209 /locus_tag="PA0088" /note="Type VI protein secretion system component VasA [Intracellular trafficking, secretion, and vesicular transport]; Region: VasA; COG3519" /db_xref="CDD:442741" gene 107182..108228 /locus_tag="PA0089" /db_xref="GeneID:879573" CDS 107182..108228 /locus_tag="PA0089" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248779.1" /db_xref="GeneID:879573" /translation="MAGEAGQPSEPLNLLAGMAAAPWDYDFFQALRRIECESPQLPRL GHSVRLADDPLRLGQKPDCTFAPSTLASVSQAGTAAVPRLDQFFFGLTGPNGPLPLHL TEYARERQRNVNDATFKRFMDVFHHRLLTLFYRAWAEARPEISHDRIDDDYWSARLAA LSGRGMPSLRGREPLADTARYYYTGHLAAQTRYPDGLRVILAEYFEVPVAVEEYVGQW LELPERSRLGVDSTSLGMDVCLGTHVWDRQHKFRLRLGPLDLDQYQRFLPDGDHFVEL AAWVAEYLGEELDWDVNLVLQRHEVPPLGLQGGGRLGFNTWLGDPGQDARDLLLARQY ATARPHEHKEKEHE" misc_feature 107182..108171 /locus_tag="PA0089" /note="Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]; Region: COG3520" /db_xref="CDD:442742" gene 108221..110929 /gene="clpV1" /locus_tag="PA0090" /db_xref="GeneID:879553" /db_xref="PseudoCap:PA0090" CDS 108221..110929 /gene="clpV1" /locus_tag="PA0090" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="secretion protein ClpV1" /protein_id="NP_248780.1" /db_xref="GeneID:879553" /db_xref="PseudoCap:PA0090" /translation="MSEISRVALFGKLNSLAYKAIEAATVFCKLRGNPYVELVHWFHQ ILQLPDSDLHQIVRQSGIDPARLAKDLTEALDRLPRGSTSITDLSSHVEEAVERGWVY GSLMFGESQVRTGYLVIGILKTPSLRHALTGLSAEFAKLKVEALTERFDEYVGASPEN GLSASDGFNAGAAPGEASGALAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEI RQLVDILMRRRQNNPILTGEAGVGKTAVVEGFALRIVAGDVPPALKDVELRALDVGLL QAGASMKGEFEQRLRQVIEDVQSSEKPIILFIDEAHTLVGAGGAAGTGDAANLLKPAL ARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVDEPSEHKAILMMRGVASTMEKHH QVQILDEALEAAVRLSHRYIPARQLPDKSVSLLDTACARTAISLHAVPAEVDDSRRRI EALETELAIIRRESAIGVATAERQRNAETLLAEERERLAALEQRWAEEKRLVDELLET RARLRAAAEAVDAGGVPLGEGEVRLDEEQRQALHARLAELQAQLSALQGEEPLILPTV DYQAVASVVADWTGIPVGRMARNEIETVLNLDRHLKKRIIGQDHALEMIAKRIQTSRA GLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEAHTVSTLK GAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVMEDGEGR VIDFKNTLILLTTNAGTEMIASLCADPELMPEPEAIAKSLREPLLKIFPPALLGRLVT IPYYPLSDDMLKAISRLQLGRIKKRVEATHKVPFEFDEGVVDLIVSRCTETESGGRMI DAILTNTLLPDMSREFLTRMLEGKPLAGVRISSRDNQFHYDFAEAE" misc_feature 108257..110884 /gene="clpV1" /locus_tag="PA0090" /note="type VI secretion ATPase, ClpV1 family; Region: VI_ClpV1; TIGR03345" /db_xref="CDD:274528" gene 110976..112907 /gene="vgrG1" /locus_tag="PA0091" /db_xref="GeneID:879511" /db_xref="PseudoCap:PA0091" CDS 110976..112907 /gene="vgrG1" /locus_tag="PA0091" /note="'Product name confidence: class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in, if known).'" /codon_start=1 /transl_table=11 /product="type VI secretion system protein VgrG" /protein_id="NP_248781.1" /db_xref="GeneID:879511" /db_xref="PseudoCap:PA0091" /translation="MQLTRLVQVDCPLGPDVLLLQRMEGREELGRLFAYELHLVSENP NLPLEQLLGKPMSLSLELPGGSRRFFHGIVARCSQVAGHGQFAGYQATLRPWPWLLTR TSDCRIFQNQSVPEIIKQVFRNLGFSDFEDALTRPYREWEYCVQYRETSFDFISRLME QEGIYYWFRHEQKRHILVLSDAYGAHRSPGGYASVPYYPPTLGHRERDHFFDWQMARE VQPGSLTLNDYDFQRPGARLEVRSNIARPHAAADYPLYDYPGEYVQSQDGEQYARNRI EAIQAQHERVRLRGVVRGIGAGHLFRLSGYPRDDQNREYLVVGAEYRVVQELYETGSG GAGSQFESELDCIDASQSFRLLPQTPVPVVRGPQTAVVVGPKGEEIWTDQYGRVKVHF HWDRHDQSNENSSCWIRVSQAWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVY NAEQTVPYELPANATQSGMKSRSSKGGTPANFNEIRMEDKKGAEQLYIHAERNQDNLV ENDASLSVGHDRNKSIGHDELARIGNNRTRAVKLNDTLLVGGAKSDSVTGTYLIEAGA QIRLVCGKSVVEFNADGTINISGSAFNLYASGNGNIDTGGRLDLNSGGASEVDAKGKG VQGTIDGQVQAMFPPPAKG" misc_feature 110979..112883 /gene="vgrG1" /locus_tag="PA0091" /note="Uncharacterized conserved protein VgrG, implicated in type VI secretion and phage assembly [Intracellular trafficking, secretion, and vesicular transport, Mobilome: prophages, transposons, General function prediction only]; Region: VgrG; COG3501" /db_xref="CDD:442724" gene complement(113022..113306) /locus_tag="PA0092" /db_xref="GeneID:880664" CDS complement(113022..113306) /locus_tag="PA0092" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248782.1" /db_xref="GeneID:880664" /translation="MTPIEYIDRALALVVDRLARYPGYEVLLSAEKQLQYIRSVLLDR SLDRSALHRLTLGSIAVKEFDETDPELSRALKDAYYVGIRTGRGLKVDLP" misc_feature complement(113055..113303) /locus_tag="PA0092" /note="Region: Tsi6; pfam18660" /db_xref="CDD:408442" gene complement(113303..114595) /locus_tag="PA0093" /db_xref="GeneID:880654" CDS complement(113303..114595) /locus_tag="PA0093" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248783.1" /db_xref="GeneID:880654" /translation="MDAQAAARLGDEIAHGFGVAAMVAGAVAGALIGAAVVAATAATG GLAAVILAGSIAAGGLSMFQIVKGLTTIFELPEPTTGVLIRGSFNVYVNSRNAMRAGD DVSATCSGLPLNHPLWPFPVLIAEGSATVYINGKPAARLQSKMVCGAHIKTGSQNTFI GGPTERVAFVLDLEEWLHTGLEALGLAALAGGLLLAAMAGVAALVGVVAIGGLMMGGM ALLGDLGDRLGPGYRDLFQGVAGMALLGFGPKLAGRRPAAVTSETAQRRAYLNNKFGR SGNLDHDINYRGNRETAAKFFKSKDIDPADAESYMNGLDFNHPVRVETLAPGKNLWQY QSPGAPQGNWYTLSPRVQPTELGINPMGTNRAANTIEPKVLNSYRTTQKVEVLRSTAA PTDDFWSVKGQSYPAKGGAQQLFSNEKGSFGLLPREGS" misc_feature complement(114113..114358) /locus_tag="PA0093" /note="proline-alanine-alanine-arginine (PAAR) domain, also containing C-terminal Rearrangement hotspot (Rhs) extensions; Region: PAAR_RHS; cd14742" /db_xref="CDD:269827" misc_feature complement(113330..113800) /locus_tag="PA0093" /note="Bacterial toxin 46; Region: Ntox46; pfam15538" /db_xref="CDD:406080" gene complement(114611..115045) /locus_tag="PA0094" /db_xref="GeneID:879595" CDS complement(114611..115045) /locus_tag="PA0094" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248784.1" /db_xref="GeneID:879595" /translation="MTLYRLHEADLEIPDAWQDQSINIFKLPASGPAREASFVISRDA SQGDAPFADYVARQLENAEKQLPGFKLHKRWDINIHGHAAVLLDYQWQREGRDLMLRQ VFIERRPAVLITTLTTTPADLPHHEPAWKQAMQTLVPRPTPS" misc_feature complement(114638..115024) /locus_tag="PA0094" /note="Region: DcrB; pfam08786" /db_xref="CDD:430218" gene 115299..117524 /locus_tag="PA0095" /db_xref="GeneID:880726" CDS 115299..117524 /locus_tag="PA0095" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248785.1" /db_xref="GeneID:880726" /translation="MALAQQTRLVRVDSPLGAEVLQLQRMEGREELGRPFAYELELIS ENPDLPLDGLLGKPASLALELHDGSRRHFHGIVAACSQGSGNGQFASYQVTLRPWLWL LTRTSDCRIFQNQKVPDIIKQVFRDLGFSDFEDALSRSYREWEYCVQYRETSFDFVSR LMEQEGIYYWFRHEQSRHILVLSDAYGAHQSPPNYASVPYYPPTLEQRERDHFYDWHM AREVQSGSLSLNDYDFQRPGARLEVRSNIARSHAAADYPLYDYPGEYVQSQDGEQYAR TRIEALQARYERVRLRGRARGLGSGHLFKLSGYPREDQNREYLVVGAEYRVVQELYET GGGGVGAQFESELDCIDAGQAYRPLPTTPLPIVRGPQTAVVVGPKGEEIWTDQYGRVK VHFHWDRHDQSNENSSCWIRVSQAWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITG RVYNAEQTVPYELPANATQSGMKSRSSKGGTPANFNEIRMEDKKGAEQLFIHAEKNQD IEVENDETHWVGHDRTKTIDHDETVHVKHDRTETVDNNETITIGVDRTEKVGNNEKIS IGANRTEDVGSNETISIGVDRTEKVGSNEKISIGANRTEDVGNDETISIGANRSESVG NNETISIGADRSESVGANETIDIGGNQSTSIGKNESRSVGQGRDTSVGKDDSLDVGKS FTLNAGDSITLVTGAASIRMKKDGSIVISGKNITIDGSGAINVKADKNVVVKGRKILQ N" misc_feature 115299..117515 /locus_tag="PA0095" /note="Uncharacterized conserved protein VgrG, implicated in type VI secretion and phage assembly [Intracellular trafficking, secretion, and vesicular transport, Mobilome: prophages, transposons, General function prediction only]; Region: VgrG; COG3501" /db_xref="CDD:442724" gene 117552..118001 /locus_tag="PA0096" /db_xref="GeneID:880714" CDS 117552..118001 /locus_tag="PA0096" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248786.1" /db_xref="GeneID:880714" /translation="MSVEIHLPGATTALPARLDGVVIGVLLDVPDAAAPVVAYPGCPS EHGLAAATTTQLSRADIGAQVALMFVAGDPRQPLLIGRIQRLPQEALAQLDGERLEFS AEREIVLRCGKASITLTRAGKVIIRGAYLSSRSTGVNRIKGGSVQIN" misc_feature 117618..117800 /locus_tag="PA0096" /note="Domain of unknown function (DUF6484); Region: DUF6484; pfam20093" /db_xref="CDD:466287" gene 117931..119130 /locus_tag="PA0097" /db_xref="GeneID:880677" CDS 117931..119130 /locus_tag="PA0097" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248787.1" /db_xref="GeneID:880677" /translation="MAPIFPAAPPGSTGSRAVRCRSTERGGPDMELLNATPLAAAYNQ GLDAEGRESLVVIAKGSFDLPLDGREARLLDEQQTLLMVDEFYGEPGFSAPRRECEFV PFKPFCDVLVLGSAQAPGGRPVQQLTAGIRVGRVSKALTVHGPRQWEPGLLGAGAGVA QPFQSQDISYASAFGGSHASPDNPGFMDCYMANPAGCGWFPRSADTAEIVGTPMPATE KLGEPVDSPHGRFTPMALGPLGRHWQARVGFAGRYDDAWLAERFPFLPADFDERYFQS APADQWTDHLRGGEEVLLLNLTGEERAAFRVPRREVPVTFFLKKGGHETAQARIDTLL VDCDARRVEVTWRIRRPLKRNLFEIAQVLVGSKSAAWWRARELGKDYYPSLAALARSR QAEEDEA" misc_feature 118018..119025 /locus_tag="PA0097" /note="Uncharacterized conserved protein, DUF2169 domain [Function unknown]; Region: COG5351" /db_xref="CDD:444132" gene 119127..120164 /locus_tag="PA0098" /db_xref="GeneID:880743" CDS 119127..120164 /locus_tag="PA0098" /EC_number="2.3.1.41" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="3-oxoacyl-ACP synthase" /protein_id="NP_248788.1" /db_xref="GeneID:880743" /translation="MSQALSIVASGMVSAVGLSAPASCAAIRCALDNFQETRFIDQGG EWLLAASVPLEQPWRGRAKLLKMAARAIDEALRGQPDLDCTELPLLLCVAEGDRPGRC AGLDESFLRDLEGELGRRFHPSSALIARGRVGGAVALLNARKLIQGGCRQVLVAGVDS FVSGPTLAAYEARERLLTSQNSNGFIPGEGAAAVLVAAPLHEEAPQLLCIGLGFGVEK ATVESEDLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNL RVLKPKFDLWHPADCIGECGAAIGPALLAVALAASRKGYGDGPNVFCHLGNDAGERAA ALLSYRRVRAA" misc_feature 119127..120161 /locus_tag="PA0098" /note="3-oxoacyl-(acyl carrier protein) synthase; Validated; Region: PRK06147" /db_xref="CDD:235715" gene 120164..121324 /locus_tag="PA0099" /db_xref="GeneID:880737" CDS 120164..121324 /locus_tag="PA0099" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248789.1" /db_xref="GeneID:880737" /translation="MANEVYANNMEISCKAANGKSIAAFPDVCFTPPQAPPTPLGVPI PYPNTGLSKDTTKGTRTIRITRKEVMLKNKSYYKTSYGDEPGRAPKKGIVTSKIKGKV YFTSWSMNVKFESKNVVRHLDLTTHNHASFPGNTPVWPYLDQATVDAGGGPCSNEVKK EKKDCADFKPHGSKDACAGLGAGKPSGKKTSNEADRLADKVAARKCLTARRCALQPYK PNSCCPQQTAHHLIEASALHDKGRGGKGSVPLKGISNYSENKAPCVCAEGVNQNVGTH GLMHTFQSAAAAKSRSGTLQLSNGSSISAKKTTYGTAKRQSMAAMGKVFPQSKCSKEC LSAQLDNYHKQCGINARTPIKAVETGQTDVTAATQAIKTRNARLGATRSRVR" misc_feature 120221..120565 /locus_tag="PA0099" /note="Toxin PAAR-like domain; Region: Tox-PAAR-like; pfam13665" /db_xref="CDD:433390" misc_feature 120839..121192 /locus_tag="PA0099" /note="GHH signature containing HNH/Endo VII superfamily nuclease toxin 2; Region: Tox-GHH2; pfam15635" /db_xref="CDD:434825" gene 121346..122266 /locus_tag="PA0100" /db_xref="GeneID:880727" CDS 121346..122266 /locus_tag="PA0100" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248790.1" /db_xref="GeneID:880727" /translation="MLKKLSPIFSNITGVVRYQDLAYVASVSDEIQEQNIAHSYVTEW DCGTWCVAGEDDDMLPWEIVSATVVHEPVEQALFLGARGQVFCMGSGDIHEEQLPDGD DAIGGRGNMRGVACIDGVAYACGMDRQVYRRFDENDWRAIDTGARPPAGSEAVVGFEA IGGFGAREIYAVGWDGEIWQYDGKRWQPRESPTNLILTAICCAEDGSVYACGQAGTLL RGRNDHWEIIAQDDVDEDLWSLAWFDGALYVSSATAVYTLVGGHLKEVDFGDEQPQRC FHLSAADGVLWSIAAKDIFSFDGQQWTRID" misc_feature 121850..122251 /locus_tag="PA0100" /note="Uncharacterized conserved protein related to plant photosystem II stability/assembly factor [General function prediction only]; Region: COG4447" /db_xref="CDD:443546" gene 122248..123495 /locus_tag="PA0101" /db_xref="GeneID:880786" CDS 122248..123495 /locus_tag="PA0101" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248791.1" /db_xref="GeneID:880786" /translation="MDAHRLSIAAIVDQHAEEAAFLALLRDYAVRAPHYDLEELAELD QRIEAHLDGLAIAGQAGHDALLEQLDAHAQGEAFALAVLAMQAGDDALIGRMRACLAA SPEARRGFAAALGWLDWDQARPWVERLLASPEPLFRAIGLAACGMHRHDPGPALLSAL GHADPAVLARAARTAGELRRRDLMANIRAYRAHDDPSLRFWANWATAQMGDEEALGPL RAFAGQPGPFQLPATMVLLAWQPRDTSMAWIRQLMQAADTRRIGIQATGLFGDPVAVP WLIQQMRDESLARVAGEAFSLITGADLALLDLELEALPDYDPGPNDDLDDDNVALDDD ENLSWPEAERVSAWWRDNGARFVAGRAYLLGEPLGEARCRQVLRDGQQRQRMAAACLL ARFVPNLPLFPTGAPVRRQLDLF" misc_feature 122266..123489 /locus_tag="PA0101" /note="conserved hypothetical protein; Region: TIGR02270" /db_xref="CDD:131323" protein_bind complement(123646..123658) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0102" /bound_moiety="AmrZ" protein_bind complement(123685..123697) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0102" /bound_moiety="AmrZ" gene 123871..124599 /locus_tag="PA0102" /db_xref="GeneID:880767" CDS 123871..124599 /locus_tag="PA0102" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="carbonic anhydrase" /protein_id="NP_248792.1" /db_xref="GeneID:880767" /translation="MPDRMRGVKSDSPEQESADDALKRIVDGFQHFRREVFPEQQALF KKLANSQRPRAMFITCADSRIVPELITQSSPGDLFVTRNVGNVVPPYGQMNGGVSTAI EYAVLALGVHHIIVCGHSDCGAMRAVLDPQTLERMPTVKAWLRHAEVARTVVADNCDC GASHDTLGVLTEENVVAQLDHLRTHPSVASRLASGQLFIHGWVYDIESAQIRAYDAKQ GRFLPLDGEHPVPMATPAPRYLSS" misc_feature 123952..124512 /locus_tag="PA0102" /note="Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an...; Region: beta_CA_cladeB; cd00884" /db_xref="CDD:238449" misc_feature order(124021..124023,124027..124029,124048..124050, 124054..124062,124096..124098,124105..124107, 124180..124182,124195..124197,124225..124227, 124234..124236,124480..124482) /locus_tag="PA0102" /note="active site clefts [active]" /db_xref="CDD:238449" misc_feature order(124048..124050,124054..124056,124225..124227, 124234..124236) /locus_tag="PA0102" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:238449" misc_feature order(124051..124062,124066..124068,124072..124083, 124096..124104,124108..124110,124114..124116, 124165..124170,124177..124182,124297..124299, 124480..124482,124486..124491,124495..124497, 124501..124503) /locus_tag="PA0102" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238449" gene 124810..126381 /locus_tag="PA0103" /db_xref="GeneID:880802" CDS 124810..126381 /locus_tag="PA0103" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sulfate transporter" /protein_id="NP_248793.1" /db_xref="GeneID:880802" /translation="MHVSKVFPSLRDTLPRDLMASVVVFLVALPLCMGIAIASGMPPA KGLLTGIVGGLVVGFLAGSPLQVSGPAAGLAVLVFELVRTYGVAMLGPILLLAGAIQL LAGRLRLGCWFRVTSPAVVYGMLAGIGILIVLSQLHVMLDLAPKASGLDNLLAFPQAA FAALGSLGMDSGLDAALLGLGTIAVMWGWDKLRPQRLRFLPGALLGVSLATLASLWLA LDVRRVEVPANLGEAIVWLRPADLLALADPSLLLAAVVVAFIASAETLLSAAAVDRLH DGPRSDMDRELSAQGVGNMLCGLLGALPMTGVIVRSSANVNAGARTRASAIFHGLWLL AFVLLLGSLLRQIPVASLAGVLVYTGVKLVDFKALGNLSRYGRMPMLVYAATALAIVF TDLLTGVLVGFALTLLKLVLKAARLKIALRYTGEHEAELRLSGAATFLKVPALSRVLD EVKPGTTLHVPMDNLSYVDHACMELLEDWGRMAPVQGSRLVIEPRALKRRLEGRLRGS VGLGGARNGGAVSPG" misc_feature 124840..126285 /locus_tag="PA0103" /note="Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism]; Region: SUL1; COG0659" /db_xref="CDD:440424" gene complement(126368..127006) /locus_tag="PA0103a" /db_xref="GeneID:17373338" CDS complement(126368..127006) /locus_tag="PA0103a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719730.1" /db_xref="GeneID:17373338" /translation="MNTAALRELIQQAHLSEARHGHLADLIASRLPHLHRTIQPQGEN TEDILTRFVHAYVEQVPDLLDAANSVAREAGIEERIKPVLKVAEQFFLTPPALLAGHD GLDALLDEAYLAHRLVEEVNDRYIAHFGQALIPLDTTVANLVAHQLIGEPFANRLDEA VHHAVENMLDATTFDADSARAYRENLKNPRVVAAWQQWPCLSKQLGVELSLG" gene 127378..128502 /gene="coxB" /locus_tag="PA0105" /db_xref="GeneID:881940" CDS 127378..128502 /gene="coxB" /locus_tag="PA0105" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome C oxidase subunit II" /protein_id="NP_248795.1" /db_xref="GeneID:881940" /translation="MLRHPRVWMGFLLLSAISQANAAWTVNMAPGATEVSRSVFDLHM TIFWICVVIGVLVFGAMFWSMIVHRRSTGQQPAHFHESTTVEILWTVVPFVILVVMAV PATRTLIHIYDTSEPELDVQVTGYQWKWQYKYLGQDVEYFSNLATPQDQIHNRQAKDE HYLLEVDEPLVLPVGTKVRFLITSSDVIHSWWVPAFAVKRDAIPGFVNEAWTKVDEPG IYRGQCAELCGKDHGFMPIVVDVKPKAEFDQWLAKRKEEAAKVKELTSKEWTKEELVA RGDKVYHTICAACHQAEGQGMPPMFPALKGSKIVTGPKEHHLEVVFNGVPGTAMAAFG KQLNEVDLAAVITYERNAWGNDDGDMVTPKDVVAYKQKQQ" misc_feature 127393..128157 /gene="coxB" /locus_tag="PA0105" /note="Heme/copper-type cytochrome/quinol oxidase, subunit 2 [Energy production and conversion]; Region: CyoA; COG1622" /db_xref="CDD:441229" misc_feature <128173..128442 /gene="coxB" /locus_tag="PA0105" /note="Cytochrome c, mono- and diheme variants [Energy production and conversion]; Region: CccA; COG2010" /db_xref="CDD:441613" gene 128512..130104 /gene="coxA" /locus_tag="PA0106" /db_xref="GeneID:881877" CDS 128512..130104 /gene="coxA" /locus_tag="PA0106" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome C oxidase subunit I" /protein_id="NP_248796.1" /db_xref="GeneID:881877" /translation="MSAVIDTPDHHAGDHHHGPAKGLMRWVLTTNHKDIGTLYLWFSF MMFLLGGSMAMVIRAELFQPGLQIVEPAFFNQMTTMHGLIMVFGAVMPAFVGLANWMI PLMIGAPDMALPRMNNFSFWLLPAAFGLLVSTLFMPGGGPNFGWTFYAPLSTTFAPHS VTFFIFAIHLAGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMP VLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSAII PTFARKPLFGYTSMVYATASIAFLSFVVWAHHMFVVGIPVTGELFFMYATMLIAVPTG VKVFNWVTTMWEGSLTFETPMLFAVAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVA HFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWMSFIGMNLAFFPMHFVGL AGMPRRIPDYNLQFADFNMVSSIGAFMFGTTQLLFLFIVIKCIRGGKPAPAKPWDGAE GLEWSIPSPAPYHTFSTPPEVK" misc_feature 128599..130053 /gene="coxA" /locus_tag="PA0106" /note="Cytochrome C oxidase subunit I. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of...; Region: Cyt_c_Oxidase_I; cd01663" /db_xref="CDD:238833" misc_feature order(128599..128601,128836..128838,128848..128850, 128854..128856,128875..128877,128995..128997, 129007..129009,129061..129063,129073..129075, 129133..129135,129154..129156,129163..129165, 129187..129189,129214..129222,129235..129240, 129244..129246,129274..129276,129385..129387, 129394..129396,129403..129408,129418..129420) /gene="coxA" /locus_tag="PA0106" /note="Subunit I/III interface [polypeptide binding]; other site" /db_xref="CDD:238833" misc_feature order(128626..128628,128806..128808,128839..128841, 128860..128862,128869..128871,129031..129036, 129052..129054,129064..129066) /gene="coxA" /locus_tag="PA0106" /note="D-pathway [active]" /db_xref="CDD:238833" misc_feature order(128644..128646,128656..128658,128665..128667, 128677..128679,128914..128919,129760..129762, 129979..129981,129988..129990) /gene="coxA" /locus_tag="PA0106" /note="Subunit I/VIIc interface [polypeptide binding]; other site" /db_xref="CDD:238833" misc_feature order(128686..128688,128695..128700,129784..129786, 129793..129798,129895..129897,129949..129951) /gene="coxA" /locus_tag="PA0106" /note="Subunit I/IV interface [polypeptide binding]; other site" /db_xref="CDD:238833" misc_feature order(128734..128736,129244..129246,129355..129357, 129364..129369,129442..129450,129457..129459, 129466..129468,129490..129492,129514..129516, 129523..129525,129544..129552,129586..129588, 129640..129645,129649..129651,129655..129669, 129859..129864,129874..129882,129907..129912) /gene="coxA" /locus_tag="PA0106" /note="Subunit I/II interface [polypeptide binding]; other site" /db_xref="CDD:238833" misc_feature order(128752..128754,129694..129696,129706..129708, 129832..129834,129943..129945) /gene="coxA" /locus_tag="PA0106" /note="Low-spin heme (heme a) binding site [chemical binding]; other site" /db_xref="CDD:238833" misc_feature order(128908..128910,128917..128919) /gene="coxA" /locus_tag="PA0106" /note="Subunit I/VIIa interface [polypeptide binding]; other site" /db_xref="CDD:238833" misc_feature order(128974..128976,129202..129213) /gene="coxA" /locus_tag="PA0106" /note="Subunit I/VIa interface [polypeptide binding]; other site" /db_xref="CDD:238833" misc_feature order(129133..129135,129154..129156,129274..129276, 129385..129387,129394..129396,129403..129408, 129418..129420) /gene="coxA" /locus_tag="PA0106" /note="Dimer interface; other site" /db_xref="CDD:238833" misc_feature order(129244..129246,129259..129264,129652..129654, 129664..129669,129874..129876) /gene="coxA" /locus_tag="PA0106" /note="Putative water exit pathway; other site" /db_xref="CDD:238833" misc_feature order(129283..129285,129430..129435,129688..129690) /gene="coxA" /locus_tag="PA0106" /note="Binuclear center (heme a3/CuB) [ion binding]; other site" /db_xref="CDD:238833" misc_feature order(129283..129285,129295..129297,129328..129330, 129430..129435,129508..129510,129517..129519) /gene="coxA" /locus_tag="PA0106" /note="K-pathway [active]" /db_xref="CDD:238833" misc_feature order(129358..129360,129370..129372,130048..130050) /gene="coxA" /locus_tag="PA0106" /note="Subunit I/Vb interface [polypeptide binding]; other site" /db_xref="CDD:238833" misc_feature order(129433..129435,129664..129669,129874..129879) /gene="coxA" /locus_tag="PA0106" /note="Putative proton exit pathway; other site" /db_xref="CDD:238833" misc_feature 129448..129450 /gene="coxA" /locus_tag="PA0106" /note="Subunit I/VIb interface; other site" /db_xref="CDD:238833" misc_feature 129547..129549 /gene="coxA" /locus_tag="PA0106" /note="Subunit I/VIc interface [polypeptide binding]; other site" /db_xref="CDD:238833" misc_feature order(129691..129693,129874..129879) /gene="coxA" /locus_tag="PA0106" /note="Electron transfer pathway [active]" /db_xref="CDD:238833" misc_feature order(129787..129789,129958..129960) /gene="coxA" /locus_tag="PA0106" /note="Subunit I/VIIIb interface [polypeptide binding]; other site" /db_xref="CDD:238833" misc_feature order(129895..129897,129907..129909) /gene="coxA" /locus_tag="PA0106" /note="Subunit I/VIIb interface [polypeptide binding]; other site" /db_xref="CDD:238833" gene 130115..130669 /locus_tag="PA0107" /db_xref="GeneID:882009" CDS 130115..130669 /locus_tag="PA0107" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="cytochrome C oxidase assembly protein" /protein_id="NP_248797.1" /db_xref="GeneID:882009" /translation="MSDAKVDTRRLVGRLLLVTVLMFAFGFALVPLYDVMCRALGING KTAGSAYSGEQQVDVGREVKVQFMTSNNIDMVWEFRSAGDQLVVHPGAVNQMVFYARN PSDKPMTAQAIPSIAPAEAAAYFHKTECFCFTQQVLQPGESIEMPVRFIVDRDLPKDV RHVTLAYTLFDITARKPPVPVAGR" misc_feature 130115..130663 /locus_tag="PA0107" /note="cytochrome C oxidase assembly protein; Provisional; Region: PRK05089" /db_xref="CDD:235341" gene 130680..131567 /gene="coIII" /locus_tag="PA0108" /db_xref="GeneID:882001" CDS 130680..131567 /gene="coIII" /locus_tag="PA0108" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome C oxidase subunit III" /protein_id="NP_248798.1" /db_xref="GeneID:882001" /translation="MASHEHYYVPAQSKWPIIASIGLLVTVFGLGTWFNDLTAGHKES HGPWIFFVGGLIIAYMLFGWFGNVIRESRAGLYSAQMDRSFRWGMSWFIFSEVMFFAA FFGALFYVRHFAGPWLGGEGAKGVAHMLWPNFQYSWPLLQTPDPKLFPPPSAVIEPWK LPLINTILLVTSSFTVTFAHHALKKNKRGPLKAWLALTVLLGIAFLILQAEEYVHAYN ELGLTLGAGIYGSTFFMLTGFHGAHVTLGALILGIMLIRILRGHFDAEHHFGFEAASW YWHFVDVVWIGLFIFVYVI" misc_feature 130728..131561 /gene="coIII" /locus_tag="PA0108" /note="Cytochrome c oxidase subunit III. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of...; Region: Cyt_c_Oxidase_III; cd01665" /db_xref="CDD:238834" misc_feature order(130866..130868,130875..130880,130887..130889, 130896..130901) /gene="coIII" /locus_tag="PA0108" /note="Subunit III/VIIa interface [polypeptide binding]; other site" /db_xref="CDD:238834" misc_feature order(130869..130874,130881..130886,130893..130895, 130908..130910,130941..130946,130953..130955, 131427..131429,131448..131450,131484..131489) /gene="coIII" /locus_tag="PA0108" /note="Phospholipid binding site [chemical binding]; other site" /db_xref="CDD:238834" misc_feature order(130917..130919,130926..130931,130962..130964, 130971..130973,130983..130988,131004..131006, 131358..131363,131370..131372,131382..131384) /gene="coIII" /locus_tag="PA0108" /note="Subunit I/III interface [polypeptide binding]; other site" /db_xref="CDD:238834" misc_feature 131100..131102 /gene="coIII" /locus_tag="PA0108" /note="Subunit III/VIb interface [polypeptide binding]; other site" /db_xref="CDD:238834" misc_feature order(131154..131162,131211..131213,131289..131291, 131319..131327,131352..131360) /gene="coIII" /locus_tag="PA0108" /note="Subunit III/VIa interface; other site" /db_xref="CDD:238834" misc_feature 131247..131249 /gene="coIII" /locus_tag="PA0108" /note="Subunit III/Vb interface [polypeptide binding]; other site" /db_xref="CDD:238834" gene complement(131583..131792) /locus_tag="PA0109" /db_xref="GeneID:882044" CDS complement(131583..131792) /locus_tag="PA0109" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248799.1" /db_xref="GeneID:882044" /translation="MLKVAIVLLLLATLVSLFSGLFFLVKDQGHGSRVVNSLTVRVVL AAATLVLVAWGFYSGELNSHAPWHF" misc_feature complement(131610..131789) /locus_tag="PA0109" /note="Protein of unknown function (DUF2909); Region: DUF2909; pfam11137" /db_xref="CDD:463229" gene 131808..132602 /locus_tag="PA0110" /db_xref="GeneID:879416" CDS 131808..132602 /locus_tag="PA0110" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248800.1" /db_xref="GeneID:879416" /translation="MGGFMQYSQRLGEAGRNDRRSMRGAFRPGLLPTLVVLGLLPVLL WLGTWQLQRADEKRALLASYEARRGAEPVSPGQLEGLRDPAYVRVRLHGRFDERHTLL LDNRLRNGQAGVEVLQPFYDQASGLWLLVNRGWVAWTDRRSPPTLETPDRVLLLDAWT YLPPPGGLHLADAPAGGWPRLVTQLDIPALWQAFGRAGLPWEIRLEPGDASFDTDWPL VSMPPERHTGYAVQWFALATALLALYLYLGVRRAREKNHESRDSDA" misc_feature 131946..132509 /locus_tag="PA0110" /note="SURF1 superfamily. Surf1/Shy1 has been implicated in the posttranslational steps of the biogenesis of the mitochondrially-encoded Cox1 subunit of cytochrome c oxidase (complex IV). Cytochrome c oxidase (complex IV), the terminal electron-transferring...; Region: SURF1; cd06662" /db_xref="CDD:119401" gene 132577..133155 /locus_tag="PA0111" /db_xref="GeneID:879275" CDS 132577..133155 /locus_tag="PA0111" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248801.1" /db_xref="GeneID:879275" /translation="MSLAIPMPERPRRARGRLQLLAIIGLVVGPMLLASAMYKWNFWV PQGRSYSGALIGNGQTPADLGVQGRSQGEQWQLLVTAPGTCGEDCQQLVYLARQINIA LGREASRAGHALAASGELPADFANLVRQDYPRLQRYGLDPALYDKAGGGERPLLWVVD PHGNLVLRYDAKANGKKLLKDVQLLLKLSHIG" gene 133220..134293 /locus_tag="PA0112" /db_xref="GeneID:879408" CDS 133220..134293 /locus_tag="PA0112" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248802.1" /db_xref="GeneID:879408" /translation="MSGATRKPGFTVAVLATLLAAVVVLLGAYTRLTHAGLGCPDWPG CYGFVHVPLSEAQLAHAELHFPDAPVEAQKGWNEMIHRYFAGALGLLILGLALHALVR RGRDGQPLKLPLLLLAVVIAQAAFGMWTVTLKLWPQVVTAHLLGGFTTLALLFLLALR LSGRFAARRYPAATRGLAGLALLLVIGQIALGGWVSSNYAAVACIDLPTCHGEWWPRM DFANGFHLTQHIGPNYLGGQLDSDARTAIHMTHRIGALCVTLVLLLLAWRLQRSGLVW PTALMLLGLSLQIGLGISNVLLHLPLPVAVAHNGGGALLLLSLVLVNYRLRAPASVRA PAPSPQRVRRTLPPAQGSRLKAA" misc_feature 133223..134158 /locus_tag="PA0112" /note="Heme A synthase [Coenzyme transport and metabolism]; Region: CtaA; COG1612" /db_xref="CDD:441220" gene 134319..135233 /locus_tag="PA0113" /db_xref="GeneID:879395" CDS 134319..135233 /locus_tag="PA0113" /EC_number="2.5.1.-" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="protoheme IX farnesyltransferase" /protein_id="NP_248803.1" /db_xref="GeneID:879395" /translation="MATVIDRHSQPTWRDFLELTKPKVVVLMLITSLIGMLLATKAPL DGFVPWQVLIFGNLGIGLCAGAAAAVNHVVDRRIDSIMARTHKRPLAEGRVSPSMALG FALLLALAGMAVLLAFTNPLTAWLTLASLLGYAALYTGFLKRATPQNIVIGGLAGAAP PLLGWVAITGHLSAEPLLLVLIIFAWTPPHFWALCIHRKDEYAKADIPMLPVTHGERY TKLHILLYTLVLFAVSLMPFVIHMSGLVYLLCALALGARFLDWAWALYCDSRPHAAIK TFKYSIVYLFLLFMALLVDHYLPLKLLL" misc_feature 134328..135227 /locus_tag="PA0113" /note="protoheme IX farnesyltransferase; Provisional; Region: PRK04375" /db_xref="CDD:235293" gene 135259..135894 /gene="senC" /locus_tag="PA0114" /db_xref="GeneID:879388" CDS 135259..135894 /gene="senC" /locus_tag="PA0114" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase assembly protein SenC" /protein_id="NP_248804.1" /db_xref="GeneID:879388" /translation="MTRVNKTVLVLVALVALVLGLTVHKVLTAQRQADPTVLLDAGIV ILPQTRKVPALEFTNQDGQAVSTASLKGRWHLLFFGYTFCPDVCPTTLAQLRELQGKL PQEVRDDLQVVFVSVDPNRDTPQQIKQYLGYFNAGFQGLTGTPENIQKLANAMSIPYI PADTSKPNYTVDHSGNLVIIGPDGEQHGFIRAPLNNAKLEAQLPGVLKPQA" misc_feature 135412..135834 /gene="senC" /locus_tag="PA0114" /note="SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c...; Region: SCO; cd02968" /db_xref="CDD:239266" misc_feature order(135508..135510,135520..135522,135775..135777) /gene="senC" /locus_tag="PA0114" /note="Cu(I) binding site [ion binding]; other site" /db_xref="CDD:239266" gene complement(135934..136386) /locus_tag="PA0115" /db_xref="GeneID:880693" CDS complement(135934..136386) /locus_tag="PA0115" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248805.1" /db_xref="GeneID:880693" /translation="MSLDWTCKHHADLTLKELYALLQLRTEVFVVEQKCPYQEVDGLD LVGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAARGQGLGHQLMERALQ AAERLWLDTPVYLSAQAHLQAYYGRYGFVAVTEVYLEDDIPHIGMRRA" misc_feature complement(135940..136380) /locus_tag="PA0115" /note="NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, from bacterial antibiotic resistance to circadian rhythms in mammals. Members...; Region: N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate; cl17182" /db_xref="CDD:473072" misc_feature complement(order(136105..136110,136138..136146)) /locus_tag="PA0115" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene 136518..136991 /locus_tag="PA0116" /db_xref="GeneID:877577" CDS 136518..136991 /locus_tag="PA0116" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248806.1" /db_xref="GeneID:877577" /translation="MRWEELSEQPCSLARVLAILGDRWTLLVLRDCFLGVRRFDDFER SLGVTRHVLADRLKRLVEAEILAKVPYQERPLREEYRLTEKGMELYPAILSLVNWGDR HLAGVEGPPLEHVHKHCGQHMHGVLVCSECGEPLHARDVTVREGLFWKGRLLRRG" misc_feature 136527..136841 /locus_tag="PA0116" /note="DNA-binding transcriptional regulator, HxlR family [Transcription]; Region: HxlR; COG1733" /db_xref="CDD:441339" gene 137248..137976 /locus_tag="PA0117" /db_xref="GeneID:878370" CDS 137248..137976 /locus_tag="PA0117" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_248807.1" /db_xref="GeneID:878370" /translation="MTQRKAVLVMGAGDATGGAIARRFAREGYVACVARRNAEKLEPL VQAIRDQGGEALACGCDARQEQQVIDLFARIEGEVGALEAVIFNVGANVWFPITETTE RVYRKVWEMAAFGGFLTGREAARVMLPRQRGTIIFTGATASLRGRAHFAAFSGAKFAL RALAQSMARELGPKDIHVAHPIIDGAIDTDFIRETLPELYKRKEQDGILDPEHIAETY WQIHCQPRDCWVHELDLRPWMETF" misc_feature 137263..137973 /locus_tag="PA0117" /note="classical (c) SDR, subgroup 10; Region: SDR_c10; cd05373" /db_xref="CDD:187631" misc_feature order(137278..137280,137284..137295,137350..137358, 137425..137433,137509..137517,137578..137580, 137659..137667,137704..137706,137716..137718, 137797..137808,137812..137817) /locus_tag="PA0117" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187631" misc_feature order(137704..137706,137716..137718) /locus_tag="PA0117" /note="active site" /db_xref="CDD:187631" gene 138001..138588 /locus_tag="PA0118" /db_xref="GeneID:877585" CDS 138001..138588 /locus_tag="PA0118" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248808.1" /db_xref="GeneID:877585" /translation="MSKQIEFFFDFGSPTTYLAWTQLPRIAAAHGASIAWRPMLLGGV FKATGNHSPIEVPAKGRYTLHDLARYAKRYGVPLAFNPAFPINTLTLMRGAQGYLGGE GFQPYLKAVFEALWVRQQNLGKPEVVAQVLAEAGFDPDEFLRLVGDEQVKEGLKATTE EAVRRGVFGAPSFFVGDQLFFGQDRLDFVAEVLAG" misc_feature 138013..138582 /locus_tag="PA0118" /note="DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway. It converts HCCA, a hemiketal formed spontaneously after ring cleavage of 1; Region: DsbA_HCCA_Iso; cd03022" /db_xref="CDD:239320" misc_feature 138037..138039 /locus_tag="PA0118" /note="putative catalytic residue [active]" /db_xref="CDD:239320" gene 138818..140167 /locus_tag="PA0119" /db_xref="GeneID:877578" CDS 138818..140167 /locus_tag="PA0119" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate transporter DctA" /protein_id="NP_248809.1" /db_xref="GeneID:877578" /translation="METPAMFIKRCSRSIFLQVVIGLVIGVICGVGIPDLAVQMKPLG DGFIKLIKMLIALIVFCVVVNGISGAGDLKKVGRIGLKSVIYFEILTTIALVLGLVVA YSLGLGSGANIHLNELPAGDVALYTGRTQEIHGPVAFLMGLIPTSVFSAFAENDILQV LLFSVLFGSALNLVGEQASGVARLINEFSHIVFRIMGMIVRLAPLGVFGAVAFTTARY GVDSLSHLGALVLVFYATCLVFVMAVLGSVLRLSGVRMLPFLRYFREELLIVMGTASS DAVLPQVMRKLEHMGIRSSTVGLVIPTGYSFNLDGFSIYLTLAVVFIAHVTGTPLAMT DLITILLVSLVTSKGAHGIPGSALVILAATLTAVPAIPVAGLVLVLSVDWFMGIGRAL TNLIGNCVATVTIARWENDIDMPRAQAILDGRLEAPAKADGEPLKRSAVAGEGKLHG" misc_feature 138839..140101 /locus_tag="PA0119" /note="C4-dicarboxylate transporter DctA; Reviewed; Region: PRK13027" /db_xref="CDD:183850" gene 140216..140902 /locus_tag="PA0120" /db_xref="GeneID:878231" CDS 140216..140902 /locus_tag="PA0120" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248810.1" /db_xref="GeneID:878231" /translation="MFSSSKLVNAVAQRLLDTIEQGRWVAGQMLPGQRELAEQMEISR PSLREAIMVLETLGVVRSLPGKGVMVLERSEPLREVAAPGEATMEDVLQLRYALEPFI VGIVAQSAGAAEISELRLLLLDLREAVEDGDPQALVEAYTAFHRRLVKLTSNPIFLSV SEQIGSALERSDNLVRRQPEYAEEILQEHDAILRAIRQHDSERASQAMRQHILNEGAR LNIDLRLPQV" misc_feature 140222..140872 /locus_tag="PA0120" /note="DNA-binding transcriptional regulator, FadR family [Transcription]; Region: FadR; COG2186" /db_xref="CDD:441789" gene 141003..141737 /locus_tag="PA0121" /db_xref="GeneID:878358" CDS 141003..141737 /locus_tag="PA0121" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248811.1" /db_xref="GeneID:878358" /translation="MVGFEARTQQGAALRPTSHFVYESIYTAILEKRLAPAAKLSKET LGQIFRVSNGTIQRALTRLAEDGAVVMPPKEVASVARPDERQARQVLDARLLVESEVV RQLPAGLDPAALAELRALVDEEQACLAARDSAGLIRLAGRFHLRLAELTENPLLQGFV RGLVARASLDIALNKGAVYTAEACAAQRALLDALEDGDSAAAAALMDAYLRGLFARMR FLPPPTTDLREAFGMKAPSGEKRRRA" misc_feature 141045..141656 /locus_tag="PA0121" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: GntR; COG1802" /db_xref="CDD:441407" protein_bind 141754..141769 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA0122" /bound_moiety="LasR" gene 141917..142327 /locus_tag="PA0122" /db_xref="GeneID:880611" CDS 141917..142327 /locus_tag="PA0122" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248812.1" /db_xref="GeneID:880611" /translation="MAYAEWIAVKVVVSKSIGTVGIRNATLQWGKFYRYTNKDDEIST EEVSSMNVQAGSPQWIASCGRENASSGTQGSFDCYDGNTKMGTFSWDDPWKSGATNTW SFTPASADYAGITSGGNATGTDIGEVTLTLGRFS" misc_feature 141926..142321 /locus_tag="PA0122" /note="Region: Aegerolysin; pfam06355" /db_xref="CDD:399391" gene complement(142359..143267) /locus_tag="PA0123" /db_xref="GeneID:877571" CDS complement(142359..143267) /locus_tag="PA0123" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248813.1" /db_xref="GeneID:877571" /translation="MDSLKGMAIFATVVDKGSMAAAAQSLGMTPSAVSQQIRKLESRA QVTLLHRTTRRLTLTEAGEAFYRSCAQMLAIAEEAERRLGEWRDAPVGELRLAAPVGF SGTLITQALKPLLENHRQLRLQLFFQDERIDLVAERIDLAIRVGNLADSSLVARHLGD WSSVLCAAPAYLRQRAPINRPEQLTEVDWISLNTSNHLNHLTLSGPGGEVCKLRLEPR VAANGMLAVRQFTLDGLGVSYQPLPEVRDALNDGRLQQLLPEWRIPGLGIYAVTPRRE AQPAKVKVAIEALRRAFATDGDERWS" misc_feature complement(143079..143258) /locus_tag="PA0123" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(142401..142994) /locus_tag="PA0123" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature complement(order(142464..142466,142545..142547, 142596..142598,142785..142787,142791..142793, 142833..142835,142950..142952,142962..142964)) /locus_tag="PA0123" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature complement(order(142569..142571,142578..142583, 142602..142616,142704..142706,142887..142907, 142911..142913,142923..142925,142932..142937, 142941..142946,142956..142961)) /locus_tag="PA0123" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene complement(143567..143848) /locus_tag="PA0124" /db_xref="GeneID:879205" CDS complement(143567..143848) /locus_tag="PA0124" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248814.1" /db_xref="GeneID:879205" /translation="MSLKWTRKAAADLDAIYDHYVVLIGPEKALKAVQDIVEQVKPLQ QVANQGAGRPSEVPGVRTLTLERWPFSAPFRVKGKEIQILRIDRVEITP" misc_feature complement(143591..143848) /locus_tag="PA0124" /note="Plasmid stabilization system protein ParE [Mobilome: prophages, transposons]; Region: ParE; COG3668" /db_xref="CDD:442885" gene complement(143845..144072) /locus_tag="PA0125" /db_xref="GeneID:880838" CDS complement(143845..144072) /locus_tag="PA0125" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248815.1" /db_xref="GeneID:880838" /translation="MSTVVSFRADDALVAALDELARATHRDRPYHLRQALAQYLERQQ WQVAAIDEGLADANAGRLLEHIEIEKRWGLQ" misc_feature complement(143866..144072) /locus_tag="PA0125" /note="Predicted transcriptional regulator, contains ribbon-helix-helix (RHH_1) domain [Transcription]; Region: PutA1; COG3905" /db_xref="CDD:443111" gene complement(144248..144868) /locus_tag="PA0126" /db_xref="GeneID:880627" CDS complement(144248..144868) /locus_tag="PA0126" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248816.1" /db_xref="GeneID:880627" /translation="MPTRVLRGLVAALPLFLAACSDSAPSSEEIARLLAERGFDKPAC ASSTLFKTFPVTLSDSFSGPGPAKGNAAVYDALVGVGLLRRDGDSYDLTPAGREDYKP ESKAFCYSSGFDVSVRSVDPAKPDDYGPAVEKGWLVTVEVKPREVKDWAKNPEVLKQA SLTTLQQITQPQVGQVSLVKPRGEEGYKLVNTRFSPRQGFHFNQAW" gene 144969..145469 /locus_tag="PA0127" /db_xref="GeneID:880815" CDS 144969..145469 /locus_tag="PA0127" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248817.1" /db_xref="GeneID:880815" /translation="MRLPANLGRLLPALCLGVLLSACSTFGQRDPLRIDLVGLEPLPG QGMEMRFMVKLRVQNPNDEPIEYNGIALDLDVNGQPLASGVSDQTGEVPRFGERVVSV PLTVSAFSAFRQAWGLSNNAPTQGMPYVVKGKLAGGLFGTVRFSEKGTLDFSGPAVGA PKTKGL" misc_feature 145020..145433 /locus_tag="PA0127" /note="Dessication stress tolerance protein, LEA/WHy domain [Defense mechanisms]; Region: LEA; COG5608" /db_xref="CDD:444339" gene 145542..145883 /locus_tag="PA0128" /db_xref="GeneID:880831" CDS 145542..145883 /locus_tag="PA0128" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248818.1" /db_xref="GeneID:880831" /translation="MSTLPPCPQCNSEYTYEDGALLVCPECAHEWSPNEAATASDDGK VIKDSVGNVLQDGDTITVIKDLKVKGSSLVVKVGTKVKNIRLVDGDHDIDCKIDGIGA MKLKSEFVRKV" misc_feature 145545..145880 /locus_tag="PA0128" /note="Uncharacterized Zn-ribbon-containing protein [General function prediction only]; Region: PhnA; COG2824" /db_xref="CDD:442072" gene complement(145965..147392) /gene="gabP" /locus_tag="PA0129" /db_xref="GeneID:880844" CDS complement(145965..147392) /gene="gabP" /locus_tag="PA0129" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="gamma-aminobutyrate permease" /protein_id="NP_248819.1" /db_xref="GeneID:880844" /translation="MSKVVLASQLPNKRNASLAPGLKQRHVTMLSIAGVIGAGLFVGS GHAIAAAGPAALLAYLIAGTLVVLVMRMLGEMAVASPDTGSFSTYADRSIGRWAGFTI GWLYWWFWVLVIPLEAIAAAAILNAWFPAIDTWIFALAVTFLLTVTNLFSVARYGEFE FWFALLKVIAIIAFIVLGAVAIVGGLPEREVSGLSSLMASHGGFVPNGYGAVLGALLT TMFSFMGTEIVTIAAAESKDPAKQITRATNSVIWRIGLFYLVSIFIVISIVPWNDPLL IQVGSYQRALELLDIPHAKLIVDLVVLVAVASCLNSAIYTSSRMVFSLAKRGDAPSVL KLTNTAHVPRPAVLASTAVGFLTTIVNYFAPEKVFTFLLASSGAVALLVYLVIAVAQL RMRKQLQASGQPIEFRMWLYPWLTWAVILFIVAALSIMLIMPEHRHEVFATALLTIFT VCLGLLNARRKPRLGEDYAGKTARV" misc_feature complement(146010..147392) /gene="gabP" /locus_tag="PA0129" /note="gamma-aminobutyrate permease; Region: GABAperm; TIGR01773" /db_xref="CDD:273797" gene complement(147561..149054) /locus_tag="PA0130" /db_xref="GeneID:880875" CDS complement(147561..149054) /locus_tag="PA0130" /codon_start=1 /transl_table=11 /product="3-oxopropanoate dehydrogenase" /protein_id="NP_248820.1" /db_xref="GeneID:880875" /translation="MGTLHHLINGEMVADNGRSADVFNPSTGEAIHKVPLADGKTLQK AIDAARAAFPAWRNTPPAKRAQVLYRFKQLLEQNEARISKLISEEHGKTLEDAAGELK RGIENVEYACAAPEILKGEYSRNVGPNIDAWSDFQPIGVVAGITPFNFPAMVPLWMYP LAIACGNTFILKPSERDPSSTLLIAELFHEAGLPKGVLNVVHGDKEAVDGLLQAPEVK AISFVGSTPIAEYIYAEGTKRGKRVQALGGAKNHAVLMPDADLDNAVSALMGAAYGSC GERCMAISVAVCVGDQVADALIAKLVPQIKALKIGAGTSCGLDMGPLVTAAAQAKVTG YIDSGVAQGAELVVDGRGYQVAGHENGFFLGGSLFDRVTPEMTIYKEEIFGPVLCVVR VNSLEEAMQLINDHEYGNGTCIFTRDGEAARLFCDEIEVGMVGVNVPLPVPVAYHSFG GWKRSLFGDLHAYGPDGVRFYTRRKAITQRWPQRASHEASQFAFPSL" misc_feature complement(147612..149045) /locus_tag="PA0130" /note="Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2; Region: ALDH_F6_MMSDH; cd07085" /db_xref="CDD:143404" misc_feature complement(order(147612..147617,147621..147638, 147657..147659,147699..147701,147705..147707, 147717..147719,147744..147755,147759..147761, 147765..147770,147777..147779,147786..147791, 147795..147800,147804..147806,148329..148331, 148335..148337,148344..148346,148353..148355, 148365..148367,148644..148646,148653..148655, 148662..148664,148677..148700,148725..148730, 148737..148739,148836..148838,148848..148850, 148857..148859,148869..148871,148875..148877)) /locus_tag="PA0130" /note="tetrameric interface [polypeptide binding]; other site" /db_xref="CDD:143404" misc_feature complement(order(147825..147827,147903..147905, 147909..147911,148215..148217,148311..148319, 148371..148373,148380..148391,148440..148442, 148530..148532,148539..148541,148584..148586, 148608..148619)) /locus_tag="PA0130" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:143404" misc_feature complement(order(148215..148217,148224..148226, 148317..148319,148608..148610)) /locus_tag="PA0130" /note="catalytic residues [active]" /db_xref="CDD:143404" gene complement(149138..149425) /locus_tag="PA0131" /db_xref="GeneID:878383" CDS complement(149138..149425) /locus_tag="PA0131" /codon_start=1 /transl_table=11 /product="beta-alanine degradation protein BauB" /protein_id="NP_248821.1" /db_xref="GeneID:878383" /translation="MSGRPQAVPTVQVDNAEVIVTEWRFAPGAETGRHRHGHDYVVVP LTDGTLLLETPEGDRHAPLVAGQAYFRKAGVEHNVINASAHEVVFVETEIK" misc_feature complement(149141..149410) /locus_tag="PA0131" /note="Pseudomonas aeruginosa BauB and related proteins, cupin domain; Region: cupin_BauB-like; cd06982" /db_xref="CDD:380387" misc_feature complement(order(149141..149146,149216..149230, 149291..149296,149309..149311,149366..149368, 149372..149377,149381..149383,149387..149392)) /locus_tag="PA0131" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:380387" gene complement(149425..150771) /locus_tag="PA0132" /db_xref="GeneID:879350" CDS complement(149425..150771) /locus_tag="PA0132" /EC_number="2.6.1.18" /codon_start=1 /transl_table=11 /product="beta alanine--pyruvate transaminase" /protein_id="NP_248822.1" /db_xref="GeneID:879350" /translation="MNQPLNVAPPVSSELNLRAHWMPFSANRNFQKDPRIIVAAEGSW LTDDKGRKVYDSLSGLWTCGAGHSRKEIQEAVARQLGTLDYSPGFQYGHPLSFQLAEK IAGLLPGELNHVFFTGSGSECADTSIKMARAYWRLKGQPQKTKLIGRARGYHGVNVAG TSLGGIGGNRKMFGQLMDVDHLPHTLQPGMAFTRGMAQTGGVELANELLKLIELHDAS NIAAVIVEPMSGSAGVLVPPVGYLQRLREICDQHNILLIFDEVITAFGRLGTYSGAEY FGVTPDLMNVAKQVTNGAVPMGAVIASSEIYDTFMNQALPEHAVEFSHGYTYSAHPVA CAAGLAALDILARDNLVQQSAELAPHFEKGLHGLQGAKNVIDIRNCGLAGAIQIAPRD GDPTVRPFEAGMKLWQQGFYVRFGGDTLQFGPTFNARPEELDRLFDAVGEALNGIA" misc_feature complement(149428..150765) /locus_tag="PA0132" /note="beta alanine--pyruvate transaminase; Provisional; Region: PRK09221" /db_xref="CDD:181707" misc_feature complement(order(149908..149910,149986..149991, 149995..149997,150094..150096,150304..150306, 150310..150315,150409..150417)) /locus_tag="PA0132" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99735" misc_feature complement(order(149908..149910,149986..149988, 149995..149997,150094..150096,150310..150315, 150409..150414)) /locus_tag="PA0132" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature complement(149908..149910) /locus_tag="PA0132" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 150906..151823 /locus_tag="PA0133" /db_xref="GeneID:879432" CDS 150906..151823 /locus_tag="PA0133" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="HTH-type transcriptional activator BauR" /protein_id="NP_248823.1" /db_xref="GeneID:879432" /translation="MAKSRNPSLGQVSDFDIRLLRIFKTIVECGSFSAAESTLGLSRS AISLHMGDLEKRLGMRLCQRGRAGFALTDEGREVYRATQTLLAALEGFRAEVNDLHQH LRGELNIGIINNLVTLPQMRITHALSALKGQGPQVRINIGMTTPNEIELGVLDGHLHV GVVPLISPLSGLEYLPLYDEHAQLYCSRGHALFERADGDIAVDEVLAADAVAPSYRLP AEAQARHQELNNSASASDREGMAFLILTGNFIGYLPSHYAADWVAAGMLRPLLPERFH YAIALTIVTRKGRRPNLVLERFLEAVAVS" misc_feature 150948..151814 /locus_tag="PA0133" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene complement(151936..153306) /locus_tag="PA0134" /db_xref="GeneID:879331" CDS complement(151936..153306) /locus_tag="PA0134" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="guanine deaminase" /protein_id="NP_248824.1" /db_xref="GeneID:879331" /translation="MNDAVPAGNFVPPLILHSDHGGSAMSSSAHRGRILHFLGDPAKL GDKAWEYFEDGLLWIEHGHVRALDHATYLLPQLPADLPLEEHPQRLLLPGFVDCHVHY PQLGVIASYGTQLLDWLETHTFPAEQRFADAGYAAAQAELFLDELLRHGTTTALVFGT VHAVSAEAFFQAAQKRRLRMIAGKVLMDRNAPPALCDTAASGYAESRALIERWHGNGR LQYAVTPRFAPTSSPEQLAAAARLLDEYPGVYLHTHLSENLKEVAWVGELFPQAQDYL DVYHRAGLVGERSVFAHGIHLSERECRCLAHKNAALAHCPSSNLFIGSGLFDLGRAQQ YGIRVGIGSDVGGGTSLSLLANLADAYKIQQLRGTSLDPFQALYLATLGGARALDLDG LVGNFLPGREADFVALDLAATPMIAQRMEHARGLADTLFVLNTLGDDRAVAETWVMGE RRHVKG" misc_feature complement(151939..153234) /locus_tag="PA0134" /note="guanine deaminase; Provisional; Region: PRK09228" /db_xref="CDD:236419" gene 153696..153836 /locus_tag="PA0135" /db_xref="GeneID:879398" CDS 153696..153836 /locus_tag="PA0135" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248825.1" /db_xref="GeneID:879398" /translation="MECATTVHRETVDSGSTHGAAEHASVDRRGLSWKAGKPSIHGHH GV" gene 154417..155988 /locus_tag="PA0136" /db_xref="GeneID:879471" CDS 154417..155988 /locus_tag="PA0136" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_248826.1" /db_xref="GeneID:879471" /translation="MSAPSSFAPPRLELRGISKRYPGCLANDRIDLCIDAGEIHALLG ENGAGKSTLMKIIYGVTRPDAGEIRWQGEPVQVRDPARARALGIGMVFQHFSLFETLS VAENIALALGAEAGSPRRLEARIREVSQRYGMPLEPRRLVHGLSIGERQRVEIVRCLM QDIRLLILDEPTSVLTPREAEDLFVTLRRLAEEGCSVLFISHKLAEVRALCQRATVLR GGRVAGQCVPAQCSDLELARLMVGDAEGLAAEYPKVTGGAPFLQVRDLHWRNPDPFGV SFAGLDLEVRSGEILGIAGVAGNGQDELLALLSGEVRLPRAQAERIRLGGCAGAHLAP DARRRAGQAFVPAERLGHGAVPEMSLADNALLTAFQQGLVKRGLVRRRKVLALAEEII RRFAVKAPGAGAPARSLSGGNLQKFILGREILQAPRLLVAAHPTWGVDVGAAALIHRA LIALRDAGTAILVVSEDLDELFLLSDRIAALCSGRLCPAVATASASPQKVGGWMAGQF EAPAAVAGAVAQGSL" misc_feature 154438..155943 /locus_tag="PA0136" /note="ABC-type guanosine uptake system NupNOPQ, ATPase component NupO [Nucleotide transport and metabolism]; Region: NupO; COG3845" /db_xref="CDD:443055" gene 155988..157085 /locus_tag="PA0137" /db_xref="GeneID:879286" CDS 155988..157085 /locus_tag="PA0137" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_248827.1" /db_xref="GeneID:879286" /translation="MLLSLEPRGRQSRWMLLASPLLAGLLTLVCGALLFACLGHDPWQ TLHTVLVQPLSDLYGLGELLVKAMPILLCALGLALAYQARVWNIGAEGQLLVGALAGS AVAIQLLDWQSRWALAWVLLAGTAAGALWAGFAAWLRTRFNANEILTTIMLNYIALNL LLYGVHGPLKDPDGFNFPQSALFGEASRLPALFEDSRVHLGALFGLLALAAVWVLAQR SFLGFQVRVLGLDRRAAGFVGFREKRLVWFVLLFSGALAGLAGVCEVAGPIGQLVPQV SPGYGYAAITVAFLGRLNPFGILCASLLMALLYLGGEAAQMSLNLPLALSGLFQGMML FFLLACDVLILYRPRLHGRWRKRPALRDALA" misc_feature 156015..157058 /locus_tag="PA0137" /note="ABC-type guanosine uptake system NupNOPQ, permease component NupP [Nucleotide transport and metabolism]; Region: NupP; COG4603" /db_xref="CDD:443653" gene 157108..158034 /locus_tag="PA0138" /db_xref="GeneID:879399" CDS 157108..158034 /locus_tag="PA0138" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_248828.1" /db_xref="GeneID:879399" /translation="MDIDLLDNLLFAMVRTGTPLLLVALGELVCERSGVLNLGQEGMM LFGAVIGFMVAFSSGSLWLGVLLAVLAGMLLAALFAGVALYLNANQVACGLALTIFGV GLASFVGAAWVGKPLQGFAPLALPVLGELPLLGRMLFAQDALVYLSLALFAAVAWMLL RSRAGLVLQAVGENPDAASAMGLPVLRVRTLAVLFGGAMAGLAGAYLSLAYTPMWAEN MTAGRGWIALALVVFASWRVLRVLLGAWLFGLASILHLVAQGVGLSIPANLLAMLPYA ATILVLVLLSRDALRTRLYAPVSLGQPWKAGH" misc_feature 157111..158028 /locus_tag="PA0138" /note="ABC-type guanosine uptake system NupNOPQ, permease subunit NupQ [Nucleotide transport and metabolism]; Region: NupQ; COG1079" /db_xref="CDD:440697" protein_bind 158084..158120 /experiment="Beta-gal reporter assay [PMID: 10913087]" /experiment="EMSA [PMID: 10913087]" /note="'Transcription factor binding site for NP_254031.; Evidence of regulation for: PA0140, PA0139'" /bound_moiety="OxyR" gene 158199..158762 /gene="ahpC" /locus_tag="PA0139" /db_xref="GeneID:879431" CDS 158199..158762 /gene="ahpC" /locus_tag="PA0139" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase" /protein_id="NP_248829.1" /db_xref="GeneID:879431" /translation="MSLINTQVQPFKVNAFHNGKFIEVTEESLKGKWSVLIFMPAAFT FNCPTEIEDAANNYGEFQKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLIGDPTH QLTNAFGVHIPEEGLALRGTFVINPEGVIKTVEIHSNEIARDVGETVRKLKAAQYTAA HPGEVCPAKWKEGEKTLAPSLDLVGKI" misc_feature 158199..158759 /gene="ahpC" /locus_tag="PA0139" /note="peroxiredoxin; Region: AhpC; TIGR03137" /db_xref="CDD:211789" gene 158907..160472 /gene="ahpF" /locus_tag="PA0140" /db_xref="GeneID:879326" CDS 158907..160472 /gene="ahpF" /locus_tag="PA0140" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase" /protein_id="NP_248830.1" /db_xref="GeneID:879326" /translation="MLDANLKTQLKAYLEKVSQPFEIVASLDDSDKSRELLGLLQDIV GLTDKITLKTDGSDARKPSFSLNRPGADIGLRFAGIPMGHEFTSLVLALLQVGGHPSK LDADVIEQVKGIEGTFEFETYFSLSCQNCPDVVQALNLMAVLNPNIRHVAIDGALFQD EVEARQIMSVPSIYLNGEVFGQGRMGVEEILAKIDTGAAARDAEKLTARDAFDVLVVG GGPAGAAAAIYAARKGIRTGVAAERFGGQVLDTMAIENFISVQETEGPKLARALEEHV RHYEVDIMNLQRASKLVPAKNAGELHEVRFESGGSLKAKTLILATGARWREMGVPGEQ EYKAKGVCFCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVAHVTLLEFDSKLRAD AVLQRKLYSLPNVEVITSALTSEVKGDGQKVTGLVYKDRNSEEFKSIELEGIFVQIGL LPNTEWLKGSVELSPRGEIIVDARGETSLPGIFAAGDVTTVPYKQIVIAVGEGAKASL SAFDHLIRTSAPE" misc_feature 158907..160466 /gene="ahpF" /locus_tag="PA0140" /note="alkyl hydroperoxide reductase subunit F; Provisional; Region: PRK15317" /db_xref="CDD:237942" gene complement(160552..161448) /locus_tag="PA0141" /db_xref="GeneID:879494" CDS complement(160552..161448) /locus_tag="PA0141" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248831.1" /db_xref="GeneID:879494" /translation="MALQVASAPHGSSEDSTSASLPANYPYHTRMRRNEYEKAKHDLQ IELLKVQSWVKETGQRVVVLFEGRDAAGKGGTIKRFMEHLNPRGARIVALEKPSSQEQ GQWYFQRYIQHLPTAGEMVFFDRSWYNRAGVERVMGFCSPLQYLEFMRQAPELERMLT NSGILLFKYWFSVSREEQLRRFISRRDDPLKHWKLSPIDIKSLDKWDDYTAAKQAMFF HTDTADAPWTVIKSDDKKRARLNCIRHFLHSLDYPDKDRRIAHEPDPLLVGPASRVIE EDEKVYAEAAAAPGHANLDIPA" misc_feature complement(160678..161361) /locus_tag="PA0141" /note="polyphosphate kinase 2, PA0141 family; Region: PPK2_P_aer; TIGR03707" /db_xref="CDD:213852" gene 161906..163255 /locus_tag="PA0142" /db_xref="GeneID:879447" CDS 161906..163255 /locus_tag="PA0142" /EC_number="3.5.4.43" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="8-oxoguanine deaminase" /protein_id="NP_248832.1" /db_xref="GeneID:879447" /translation="MSRTWIRNPLAIFTANGLDAAGGLVVEDGRIVELLGAGQQPAQP CASQFDASRHVVLPGLVNTHHHFYQTLTRAWAPVVNQPLFPWLKTLYPVWARLTPEKL ELATKVALAELLLSGCTTAADHHYLFPGGLEQAIDVQAGVVEELGMRAMLTRGSMSLG EKDGGLPPQQTVQEAETILADSERLIARYHQRGDGARVQIALAPCSPFSVTPEIMRAS AEVAARHDVRLHTHLAETLDEEDFCLQRFGLRTVDYLDSVGWLGPRTWLAHGIHFNAE EIRRLGEAGTGICHCPSSNMRLASGICPTVELEAAGAPIGLGVDGSASNDASNMILEA RQALYLQRLRYGAERITPELALGWATRGSARLLGRSDIGELAPGKQADLALFKLDELR FSGSHDPLSALLLCAADRADRVMVGGAWRVVDGAVEGLDLAALIARHRAAASALIAG" misc_feature 161909..163252 /locus_tag="PA0142" /note="hydroxydechloroatrazine ethylaminohydrolase; Reviewed; Region: PRK08203" /db_xref="CDD:236184" misc_feature order(162095..162097,162101..162103,162599..162601, 162608..162610,162710..162712,162863..162865) /locus_tag="PA0142" /note="active site" /db_xref="CDD:238623" misc_feature order(162179..162181,162188..162190,162275..162280, 162365..162370) /locus_tag="PA0142" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:238623" protein_bind 163290..163305 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA0143" /bound_moiety="LasR" gene 163363..164415 /gene="nuh" /locus_tag="PA0143" /db_xref="GeneID:879451" CDS 163363..164415 /gene="nuh" /locus_tag="PA0143" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="nonspecific ribonucleoside hydrolase" /protein_id="NP_248833.2" /db_xref="GeneID:879451" /translation="MSRAARPCNRFCSLLLGLALLMPASLPLSAAETVAPPSPRTLII DTDPGADDVIALLFAMASPKELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVY AGAPRPLLRTPIYAADVHGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKSVTL AMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITPAAEFNIFADPHAAEIVL KSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGG PVHDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGD AQGFFDLLTERIARLP" misc_feature 163474..164409 /gene="nuh" /locus_tag="PA0143" /note="Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; Region: URH1; COG1957" /db_xref="CDD:441560" gene complement(164443..165069) /locus_tag="PA0144" /db_xref="GeneID:879242" CDS complement(164443..165069) /locus_tag="PA0144" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248834.1" /db_xref="GeneID:879242" /translation="MSRSNGSSSRRTFLRLAALLLPAGALLGSLPGVRAAARPRKLYL AGPDVFRADAVAHGEALKALCARYGFEGLYPLDNALPKQLAEPREQAAWIYRANIGLI ERADAVLANLNFFRGAEPDSGTAFEVGYATALGKPVYGYVDDAGSYAERIRRHAPELI GEDPTRDRDGMTLEEFGLPLNLMLAVPATLVVGDAEQALRQLASRRHG" misc_feature complement(164461..164940) /locus_tag="PA0144" /note="Nucleoside 2-deoxyribosyltransferase [Nucleotide transport and metabolism]; Region: RCL; COG3613" /db_xref="CDD:442831" protein_bind complement(165121..165136) /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA0144" /bound_moiety="LasR" gene complement(165219..165737) /locus_tag="PA0145" /db_xref="GeneID:879449" CDS complement(165219..165737) /locus_tag="PA0145" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248835.1" /db_xref="GeneID:879449" /translation="MTAIYLAGPDVFRPDAEAHGETLKALCAEFGFVGLYPLDHALPA DIREPAAQAAWIYRANVGLIERADCVLANLEPFRGSEPDSGTAFEVGYALALGKPVYA YLSDAGAYAERLARLAPEWLGEHPGEDRDGWQLEGFGLPLNLMLAVPSRLVAGGPREA LRRLAEELGGNA" misc_feature complement(165303..165728) /locus_tag="PA0145" /note="Nucleoside 2-deoxyribosyltransferase; Region: Nuc_deoxyrib_tr; pfam05014" /db_xref="CDD:461520" gene 165976..167073 /locus_tag="PA0146" /db_xref="GeneID:879465" CDS 165976..167073 /locus_tag="PA0146" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248836.1" /db_xref="GeneID:879465" /translation="MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVYVGP VGDHGWTYQHELGRRELVEHFGDKVKTSFVENVAEGADAERVIRNLAKDGYGLVFTTS FGYMNPTAKVARQFPKVTFEHATGYKRDRNLGTYLSRSYEGRYVGGFLAAKMTRSHKI GYIASFPIPEVIRDINAIQLALDKYDPQAELKVMWVSTWFDPGKEADAANALIDQGVD VVFQHTDSPAPIQAAERRGVYAVGYASDMQHFGPKTVLTSIVNDWGPHYIRSAQAVMD GTWKSEDFWGGLAESTVVLPLNQEVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSG KERFAAGVSATKADLASMNYYVEGIKADLPK" misc_feature 166081..166905 /locus_tag="PA0146" /note="periplasmic binding component of a basic membrane lipoprotein (BMP) from Brucella abortus and its close homologs in other bacteria; Region: PBP1_BMP-like; cd19963" /db_xref="CDD:380618" misc_feature order(166099..166104,166126..166128,166348..166350, 166486..166488,166570..166572,166705..166707, 166756..166758) /locus_tag="PA0146" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:380618" gene 167146..168108 /locus_tag="PA0147" /db_xref="GeneID:879502" CDS 167146..168108 /locus_tag="PA0147" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_248837.1" /db_xref="GeneID:879502" /translation="MDRLPIIDIAPLYGADRGAWNDVARRIDQACREWGFFYIAGHPL PAARFEALLAAAREFFALPVEEKLKIDITRSRNHRGYGAIATEQLDPALPSDFKETFD MALHLPAEHPDVRAGKSFYGPNRHPDLPGWEALLEGHYADMLALARTVLRALAIALGI EEDFFDRRFEQPVSVFRLIHYPPASARQSADQPGAGAHTDYGCVTLLYQDAAGGLQVQ NRQGEWIDAPPIDGTFVVNIGDMMARWSNDRYRSTPHRVISPRGVHRYSMPFFAEPHM DTEIRCLPGCFDADNPPKYPPTTCGDWLTSRFAQTYAYRRGETA" misc_feature 167146..168093 /locus_tag="PA0147" /note="Isopenicillin N synthase and related dioxygenases [Secondary metabolites biosynthesis, transport and catabolism]; Region: PcbC; COG3491" /db_xref="CDD:442714" gene 168213..169163 /locus_tag="PA0148" /db_xref="GeneID:879249" CDS 168213..169163 /locus_tag="PA0148" /EC_number="3.5.4.4" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="adenosine deaminase" /protein_id="NP_248838.1" /db_xref="GeneID:879249" /translation="MYEWLNALPKAELHLHLEGTLEPELLFALAERNRIALPWNDVET LRKAYAFNNLQEFLDLYYAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTH TDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFLRHLSEEQAQKTLDQALPFRDAF IAVGLDSSEVGHPPSKFQRVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVERIDH GVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCVFDDMSQHTILDMLERGVKVTVNSDD PAYFGGYVTENFHALQQSLGMTEEQARRLAQNSLDARLVK" misc_feature 168237..169148 /locus_tag="PA0148" /note="Adenosine deaminase [Nucleotide transport and metabolism]; Region: Add; COG1816" /db_xref="CDD:441421" gene 169361..169906 /locus_tag="PA0149" /db_xref="GeneID:879673" CDS 169361..169906 /locus_tag="PA0149" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ECF subfamily sigma-70 factor" /protein_id="NP_248839.1" /db_xref="GeneID:879673" /translation="MPADGEAARRADLLKAFLAQRQRMESLVSRWVGCRATAADLVQE LFLRFWRRPAAPVEELGSYLLRSARNLAIDHLRGEGSRQRQLDDWLPEQRQGEPVGPE QALEAGDQWRRVEAALRGLPERTRRIFLLNRIHGRTYAEIAQAMQLSQSAVEKHMMRA LDACKASLAGPAGEQARSAQP" misc_feature 169367..169870 /locus_tag="PA0149" /note="DNA-directed RNA polymerase specialized sigma subunit, sigma24 family [Transcription]; Region: RpoE; COG1595" /db_xref="CDD:441203" gene 169903..170898 /locus_tag="PA0150" /db_xref="GeneID:878563" CDS 169903..170898 /locus_tag="PA0150" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transmembrane sensor" /protein_id="NP_248840.1" /db_xref="GeneID:878563" /translation="MTRPDSDAAPYEPVLEQTAQAWLVRLRGTPDAATRRAFEDWLAQ RPAHAEAYARAEALWRLTEIPASRLAIEEADALEAYLRPRRASRNPRRWAYPLASVAC LLAMLWLGGWWQPGDWLQDWRADYVAAPGQVAEWKLADGSYLSLDAGSAVRVRIDGGQ RRVELLRGAAALRVKRDALPFVVEAGEGRARVLGTEFEVRRGAGATRVTVLQGRVAVS AGTGAGAAEEVLGAGQQVGFADGKLGRPVAIDAAAALAWRQGWLSFYRRPLAEVLDEL ARYYPGRILLLDDALGRQPVSGSFRSDDPEAALKSLQAVLGYRQQILFGRLVVIR" misc_feature 169951..170076 /locus_tag="PA0150" /note="Domain of unknown function (DUF4880); Region: DUF4880; pfam16220" /db_xref="CDD:435227" misc_feature 170119..170895 /locus_tag="PA0150" /note="Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport [Inorganic ion transport and metabolism, Signal transduction mechanisms]; Region: FecR; COG3712" /db_xref="CDD:442926" gene 171047..173434 /locus_tag="PA0151" /db_xref="GeneID:877893" CDS 171047..173434 /locus_tag="PA0151" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="TonB-dependent receptor" /protein_id="NP_248841.1" /db_xref="GeneID:877893" /translation="MTPFPRFALRTLPALFLSLGCLAATVQAAEAVRYRFSQAAAPLA QALNAFSRASGQTLLYTAELPPQATAPALHGSLVAEEALQRLLQGSGLRARRIDERTL TLEPIPASGALDLDATTVSAAAPAQGYRPAANASISRGDAPVLEIPQAISVVPAQALQ DQRPRNLDDALGNISGITQANTLGGTQDAVMKRGFGDNRDGSIMRDGMPSVQGRNFTA TADHVEVLKGPASLLYGIQDPGGVVNVVSKKPQLQQANALTLRGSAYAHGRNGSGGQL DSTGPLGDSGLAYRMILDHEDEDYWRDFGKSRETLVAPSLAWYGEDTTVNLSYEHREF TTPFDRGTAIDPRTNRPLDIPRSRRLDEPFNITEGRSELTRLDLERQLDDTWKAHFGY GYSRETYDDNQARVMAVNADGTLTRRMDGTHGAVSSDSFTTLGLSGTLQLAGMQHDLQ FGMDHEKRKIFRADLLRDSKTSRFDYLDPVYGQVVPSTRVVAGDSDQTDKLRSDSLYF QDSIHLDERWILVGGARYQIYDQLAGRGRPFNANTDINGQKWVPRGGLVYRLSDEVSL YGSYMRSFKPNSTIAPLSTGETIDSAILPEEATSWELGAKLDVPGRLSGTLALFDIRK KNVLVNELDGAGNSSVRAAGRVRSRGLELDLTGQLSERWSLIGSYAWLAAEVTEDPTL EGKRLQNVARNTASLSAVYELGQLFGGDRLRLGGGARYVGKRPGDPANSFDLPSYTVA DAFASYDTRFGGHGVKFQLNVKNLFDRTYYPSSANRLYVAMGEPRQFQVSTTVEF" misc_feature 171215..171364 /locus_tag="PA0151" /note="Secretin and TonB N terminus short domain; Region: STN; smart00965" /db_xref="CDD:198033" misc_feature 171293..173431 /locus_tag="PA0151" /note="Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]; Region: FhuE; COG4773" /db_xref="CDD:443805" gene 173811..174638 /gene="pcaQ" /locus_tag="PA0152" /db_xref="GeneID:878518" CDS 173811..174638 /gene="pcaQ" /locus_tag="PA0152" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcriptional regulator PcaQ" /protein_id="NP_248842.1" /db_xref="GeneID:878518" /translation="MAVSQPAISKTLKELEEILGARLFERSKAGAELTEAGVTFLRYA GPCVQALRDGVNTLRGHEAQVETVRVGVLSTVESLVVPEVIRRLHRRHGALVVSVATG PSAYLLAQLKVGELDLVVGRMTDSPDIQGLTFEHLYSESMMLVVRPGHPLLAAPLGDL QRLAEFPLVLPLAGTTIRRHADSLFVQWGIALAGQRLETLSPTLSRSYVLRSEAIWVA PRDAVRLDVGNGELAELDLGIREPGGSVGLCHNAALPLPLGAQWFSAVLREVAAELH" misc_feature 173811..174629 /gene="pcaQ" /locus_tag="PA0152" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" misc_feature order(174054..174059,174063..174068,174075..174077, 174087..174089,174093..174113,174396..174413, 174429..174434,174438..174443) /gene="pcaQ" /locus_tag="PA0152" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene 174773..175492 /gene="pcaH" /locus_tag="PA0153" /db_xref="GeneID:878130" CDS 174773..175492 /gene="pcaH" /locus_tag="PA0153" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="protocatechuate 3,4-dioxygenase subunit beta" /protein_id="NP_248843.1" /db_xref="GeneID:878130" /translation="MHDAESRRFVIRDRNWHPKALTPDYKTSVPRSPSQALVSIPQSL SETSGPDFSHLRLGRHDNDLLLNFDHGGLPQGERIIMFGRVFDQYGKPVPHTLVEMWQ ANAGGRYRHKNDRYLAPLDPNFGGVGRTLTDSEGHYYFRTIKPGPYPWRNGPNDWRPA HIHVSVSGPAIAARLVTQMYFEGDPLIPKCPIIRTLADPEAAQSLIGRLDMSMANPMD CLAYRFDIVLRGQRKTFFENA" misc_feature 174821..175486 /gene="pcaH" /locus_tag="PA0153" /note="protocatechuate 3,4-dioxygenase, beta subunit; Region: protocat_beta; TIGR02422" /db_xref="CDD:131475" gene 175503..176108 /gene="pcaG" /locus_tag="PA0154" /db_xref="GeneID:882145" CDS 175503..176108 /gene="pcaG" /locus_tag="PA0154" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="protocatechuate 3,4-dioxygenase subunit alpha" /protein_id="NP_248844.1" /db_xref="GeneID:882145" /translation="MSHELLRETPSQTAGPYVHIGLALAAAGNPTRDLEIWNRMAREG ARGQHILLLGHVYDGNGHLVRDSFLEFWQADSEGRYQERYDPERPFNSFGRTATTFDA GEWTLHTVKPGVVRNAQGVPMAPHINVSLFARGINIHLQTRLYFDDETEANAACPVLN LIEQAPRRDTLLAQRCEVDGQLAYRFDIRIQGDNETVFFDF" misc_feature order(175518..175544,175551..175553,175557..175568, 175674..175682,175698..175700,175710..175712, 175716..175718,175740..175742,175746..175754, 175785..175787,175869..175871,175878..175880, 175902..175907,175914..175916,175929..175931, 176001..176003,176070..176075,176085..176087, 176094..176102) /gene="pcaG" /locus_tag="PA0154" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:239546" misc_feature 175527..176105 /gene="pcaG" /locus_tag="PA0154" /note="protocatechuate 3,4-dioxygenase, alpha subunit; Region: protocat_alph; TIGR02423" /db_xref="CDD:274126" misc_feature order(175548..175550,175902..175904) /gene="pcaG" /locus_tag="PA0154" /note="active site" /db_xref="CDD:239546" gene 176315..177154 /gene="pcaR" /locus_tag="PA0155" /db_xref="GeneID:882136" CDS 176315..177154 /gene="pcaR" /locus_tag="PA0155" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcriptional regulator PcaR" /protein_id="NP_248845.1" /db_xref="GeneID:882136" /translation="MSELPEHPATLAPPTVLSPAKRIEAFTGDPNFMTSLARGLAVIH AFQERKRHLTIAQISHRTEIPRAAVRRCLHTLMQLGYATTDGRTYSLLPKVLTLGHAY LSSTPLAITAQPILDRLSEQLHEACSMATLEGDDVLYIARSATPQRLISVDLNVGSRL PAYCTSMGRILLAALDDDALHAYFGGVEMQAKTSRTLYTPETLLPCLVEIRRQGWCIV DQELEVGLRSLAVPVRDSAGHVLAALNVGTHAGRVSRAELESRFLPLLLEASRELSAR LFT" misc_feature 176399..177145 /gene="pcaR" /locus_tag="PA0155" /note="beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; Region: pcaR_pcaU; TIGR02431" /db_xref="CDD:131484" gene 177307..178458 /locus_tag="PA0156" /db_xref="GeneID:882149" CDS 177307..178458 /locus_tag="PA0156" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux membrane fusion protein" /protein_id="NP_248846.1" /db_xref="GeneID:882149" /translation="MSDARGAFHSKGRWSRMALPAILCAGLLVGCGAEPPAEEHVRVL AQTVKMAEFASATSITGDIQARVQADQSFRVGGKIVERLVDVGDHVAAGQVLARLDPQ DQRSNVENAQAAVAAQQAQSKLADLNYQRQKALLPKGYTSQSEYDQALASVRSAQSSL KAAQAQLANARDLLSYTELRASDAGVITARQAEVGQVVQATVPIFTLARDGERDAVFN VYESLFSHDVDGQRITVSLLGKPEVTASGKVREITPTVDERSGTLKVKVGLDSVPAEM SLGSVVNASVAAPAEHSVVLPWSALSKVGEQPAVWLLDQQGKARLQPVRVARYASEKV VIDGGLEAGQTVVTVGGQLLHPGQVVEVAQPPQPTQSTASRDAVGGGQP" misc_feature 177445..178410 /locus_tag="PA0156" /note="Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms]; Region: AcrA; COG0845" /db_xref="CDD:440606" gene 178455..179525 /locus_tag="PA0157" /db_xref="GeneID:882134" CDS 178455..179525 /locus_tag="PA0157" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux membrane fusion protein" /protein_id="NP_248847.1" /db_xref="GeneID:882134" /translation="MKPFSLAGLFGFALLLSGCGDEPPPAPPRPVLTVTVKTLKNDDL GRFAGSIQARYESVLGFRTNGRIASRLFDVGDFVGKGALLATLDPTDQQNQLRASQGD LASAEAQLIDAQANARRQEELFARSVTAQARLDDARTRLKTSQASFDQAKAAVQQARD QLSYTRLVTDFDGVITTWHAEAGQVVSAGQAVVTLARPEVREAVFDLPTEVAESLPAD ARFLVSAQLDPQARTTGSIRELGPQADASTRTRRVRLSLAQTPEAFRLGSTIQVQLSS AGSVRSVLPASVLLERDGKTQVWVVDGKQSSVALREVQVLSRDERQVVIGQGLADGDR VVRAGVNSLKPGQKIKLDEDAR" misc_feature 178590..179522 /locus_tag="PA0157" /note="Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms]; Region: AcrA; COG0845" /db_xref="CDD:440606" gene 179522..182569 /locus_tag="PA0158" /db_xref="GeneID:882140" CDS 179522..182569 /locus_tag="PA0158" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux transporter" /protein_id="NP_248848.1" /db_xref="GeneID:882140" /translation="MKGGFNLSDWALRHQSLVWYLMAVSLVMGVFSYLNLGREEDPSF AIKTMVIQTRWPGATVDDTLEQVTDRIEKKLEELDSLDYVKSYTRPGESTVFVYLKDT TKAGDIPDIWYQVRKKISDIQGEFPQGIQGPGFNDEFGDVFGSVYAFTADGLDFRQLR DYVEKVRLDIRSVKDLGKVQMIGAQNEVIYLNFSTRKLAALGLDQRQVVQSLQAQNAV TPSGVVEAGPERISVRTSGNFRSEKDLQAVNLRVNDRFYRLSDLASISRDFVDPPTSL FRYKGEPAIGLAVAMKEGGNILEFGEALNARMQEITGELPVGVGVHQVSNQAQVVKKA VGGFTRALFEAVVIVLIVSFVSLGLRAGLVVACSIPLVLAMVFVFMEYTDITMQRVSL GALIIALGLLVDDAMITVEMMITRLELGDSLHDSATYAYTSTAFPMLTGTLVTVAGFV PIGLNASSAGEYTFTLFAVIAVALLLSWIVAVLFAPVIAVHILPKTLKHKSEQKKGRI AERFDSLLHLAMRRRWTTIFLTALLFGVSLFLMKFVQHQFFPSSDRPELLVDLNLPQN SSIHETRAVMDRLEATLKDDEDIDHWSAYVGEGAIRFYLPLDQQLQNNFYGQLVIVTK DLEARERVAARLRDRLRKDYVGISTYVQPLEMGPPVGRPIQYRVSGPQIDKVREYAMG LAGVLDGNPNIGDIVYDWNEPGKMLKIDIAQDKARQLGLSSEDVAQIMNSVVTGSAVT QVRDDIYLVNVIGRAEDSERGSLETLESLQIVTPSGTSIPLKAFAKVSYELEQPLVWR RDRKPTITVKASLRGEIQPTDLVARLAPEVKRFADGLPANYRIEVGGTVEESGKAEGP IAKVVPLMLFLMATFLMIQLQSVQKLFLVASVAPLGLIGVVAALLPTGTPMGFVAILG ILALIGIIIRNSVILVTQIDAFEKDGKTPWEAVLEATHHRTRPILLTAAAASLGMIPI AREVFWGPMAYAMIGGIVAATLLTLIFLPALYVAWYRIPEPGR" misc_feature 179537..182551 /locus_tag="PA0158" /note="Multidrug efflux pump subunit AcrB [Defense mechanisms]; Region: AcrB; COG0841" /db_xref="CDD:440603" gene 182768..183706 /locus_tag="PA0159" /db_xref="GeneID:882081" CDS 182768..183706 /locus_tag="PA0159" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248849.1" /db_xref="GeneID:882081" /translation="MDTLQGMRVFARVVDSGSFTSAAQALDLSTAQVSRLISDLEAHL QTRLLHRTTRRLALTEAGERYLERCRGILEDIEVAEAEAAGAHIRPCGRLRVQSLMGM GQHHLVPMIARYGALFPDVVIELTLSQRNPDMLEEGQDVLITGERQLPDSEFVAQRLG SIHSVLCASPGYLQQHGVPRSVDDLERHVCLRLQDPAYPEGWIFADEQGERTVSPQNT FMVNVAEVMAQAAKADLGIALLPSYVAAAALRNGELLRVLPGHAMHQRTIYALYPSRR YLDAKIRTWVDLLQQELPQAFARDETTMQSSSYCAQ" misc_feature 182777..182956 /locus_tag="PA0159" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 183041..183634 /locus_tag="PA0159" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(183071..183073,183083..183085,183197..183199, 183245..183247,183251..183253,183437..183439, 183488..183490,183569..183571) /locus_tag="PA0159" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature order(183074..183079,183089..183094,183098..183103, 183110..183112,183122..183124,183128..183148, 183332..183334,183419..183433,183452..183457, 183464..183466) /locus_tag="PA0159" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 183822..184007 /locus_tag="PA0160" /db_xref="GeneID:882103" CDS 183822..184007 /locus_tag="PA0160" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248850.1" /db_xref="GeneID:882103" /translation="MNRQILAAAILSLFSLAFSQAGFAEESSLMTNRMVDANQQAIEH QQELSASAAQAGARSDS" gene 184594..185928 /gene="opdC" /locus_tag="PA0162" /db_xref="GeneID:879518" CDS 184594..185928 /gene="opdC" /locus_tag="PA0162" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="histidine porin OpdC" /protein_id="NP_248852.1" /db_xref="GeneID:879518" /translation="MRNLFALTPMALALCTASAAWADEGEAKEGFIEGSSLQLLTRNY YFNHDRRHASGHDSKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKLDGGGGTGGTS ILPITSPSKEGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLP QTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLGSYYGELPGDRDSHHLSWLGG TWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLG RIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNE KSWKLQYDYDFVALGLPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWER DLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF" misc_feature 184678..185919 /gene="opdC" /locus_tag="PA0162" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene complement(185957..186754) /locus_tag="PA0163" /db_xref="GeneID:882025" CDS complement(185957..186754) /locus_tag="PA0163" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248853.1" /db_xref="GeneID:882025" /translation="MTMNGQPAELHRPIPTLARLPRPVYARAESLRAGSWTSRHRHAW VQLSYAISGVLGVHTAEGSFFAPPQRAIWIPAQLEHEVVTSTRAEMRSLYIRGDACAW APTRCRVLEVTPLARELIKSFCELPVDYPEGDSAESRLVQVLLDQLRLLPEVAFSLPM PREPRLLRLCQALIDEPTQSLTMGDWAQRLGTSEKTLSRLFQRETGMNYRLWRQRQRL LASLNALEAGDSVTGAALDSGYDSTSAYIAAFKGLFGFTPGELFRQR" misc_feature complement(185960..186748) /locus_tag="PA0163" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" misc_feature complement(186401..186685) /locus_tag="PA0163" /note="AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain; Region: cupin_NimR-like_N; cd06124" /db_xref="CDD:380379" gene 186832..188448 /locus_tag="PA0164" /db_xref="GeneID:879444" CDS 186832..188448 /locus_tag="PA0164" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="gamma-glutamyltranspeptidase" /protein_id="NP_248854.1" /db_xref="GeneID:879444" /translation="MLDFSAHALPYASQRSPVHARRGMVATSQPQAAQVGLEILRRGG NAIDAAIATAAALTVVEPTGCGIGGDAFALVWTRGRLHGLDASGRAPGLLDRERVRAA GHERMPLYGWTPVTVPGCPAAWGELSRRFGKLPFEQLLRPAIELARDGFPVSPVIARL WQSGLDKFRAALPQRPELRAWFDEFLIDGRAPRAGEVFRQPGQADTLDELARSQCESF YRGELARAIVGHAECSGGYLRAEDLAGYQAKWVEPISLNYRGYDVWEIPPSGQGLIAL MTLNILKGFEFGERDCARTWHRQLEAMKLAYVDGLHYISQPQSMRVSVEELLHEDYAA SRRALIGERALDPSPGQPRPGGTVYLACGDEEGNLVSFIQSNYHGFGSGVVVPGTGIA LQNRGAEFSLDPDHVNCLEPGKQTFHTIIPGFLSKDGVPLGPFGVMGAYMQPQGHVQM VMNLVDFGLNPQAALDAPRWQWLGGLRVGIEHAAPRALAAELAQRGHQVEIAYDSTSY GRGQIVLRDPASGVLCGGTEPRTDSQIAVW" misc_feature 186901..188421 /locus_tag="PA0164" /note="Gamma-glutamyltranspeptidase [Amino acid transport and metabolism]; Region: Ggt; COG0405" /db_xref="CDD:440174" gene 189120..189956 /locus_tag="PA0165" /db_xref="GeneID:879418" CDS 189120..189956 /locus_tag="PA0165" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248855.1" /db_xref="GeneID:879418" /translation="MSRTLATVMLAGGLLAAGQAVAEDHDMTPTHETDSGPLLWHNES LTYLYGKNFKINPPIQQTFTLEHASGWTWGDLFIFFDQINYNGKEDASNGKNTYYGEI TPRLSFGKLTGADLSFGPVKDVLLAGTYEFGEGDTEAYLLGPGFDLAIPGFDYFQLNF YYRKPDGNRVRAGAWQITPVWSYTIPVGNSDILIDGYMDWVINNKSASTSRRNQSDYH ANLHFNPQVKYDLGKALGYEPKHLYVGLEYDYWSDKYGVKDSQYFTTDQNTASFLVKY HF" misc_feature 189129..189953 /locus_tag="PA0165" /note="Nucleoside-specific outer membrane channel protein Tsx [Cell wall/membrane/envelope biogenesis]; Region: Tsx; COG3248" /db_xref="CDD:442479" gene 190198..191604 /locus_tag="PA0166" /db_xref="GeneID:879314" CDS 190198..191604 /locus_tag="PA0166" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_248856.1" /db_xref="GeneID:879314" /translation="MHSEDQRPNDLIYGLDDRPRPLPAFLAALQHVLASFVGIVTPPL VIGSLLGLGEHLPYLISMALMVSGAGTLIQARRPFGIGAGMICLQGTSFAFLGAVLAA GMLVKQRGGGPEEILAMIFGVCFFGAFVQIVLSRFLGHLRRVITPLVTGIVITLIGVS LIKVGITDLGGGAGATDFGAPANLALGALVLLSIVLLNRSRLPWLRLAAIVIGLALGT LAAWATGLFVPRALPELPLVSLPQPFRFGFAFDWMAFLPVALIYLISSIETVGDLTAN CMLSRQPLEGPAYLQRLRGGVLGDGVSCLLAATFSAFPNTTFAQNNGVIQLTGVASRH VGIYIGGVLLALGLFPWVGAILQQIPKPVLGGATLVMFGSVAAAGIRILGQTAMDRRS VLIIAASFGVGLGVAAQPTLLDQMPAVVKTLFDSAITSGGITAILLNLLLPEERVAEA AQASAKGGALARWRKPLG" misc_feature 190207..191559 /locus_tag="PA0166" /note="Xanthine/uracil permease [Nucleotide transport and metabolism]; Region: UraA; COG2233" /db_xref="CDD:441834" gene 191697..192362 /locus_tag="PA0167" /db_xref="GeneID:879316" CDS 191697..192362 /locus_tag="PA0167" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248857.1" /db_xref="GeneID:879316" /translation="MTLTVPAHDPAARDKPAGRIRQKNEEAILAAAEEEFARHGFKGT SMNTIAQNVGLPKANLHYYFGNKLGLYTAVLSNILELWDSTFNTLGVDDDPAEALARY IRAKMEFSRRYPLASRIFAMEIISGGECLTAHFNQDYRSWFRGRAAVFEAWIAAGRMD PVDPVHLIFLLWGSTQHYADFASQIGLVTGRKRMSRQDFAAAADNLVRIILKGCGLTP PAA" misc_feature 191805..191918 /locus_tag="PA0167" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:425684" misc_feature 191919..192347 /locus_tag="PA0167" /note="YcdC-like protein, C-terminal region; Region: TetR_C_3; pfam08362" /db_xref="CDD:429946" gene 192368..192958 /locus_tag="PA0168" /db_xref="GeneID:879343" CDS 192368..192958 /locus_tag="PA0168" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248858.1" /db_xref="GeneID:879343" /translation="MPSTLQGLAEYREEIRKSRFHTIAAPVADEDEAQAFIAAHRDAS AGHNCWAWKCGAQYRFSDDGEPGGSAGRPILAAIEGQDMDCVAVLVSRWFGGIKLGTG GLARAYGGGAAKCLQQAPRSELVERCRVRFACAFADHALLKARSLALGASVAAEDYGA DGVVLTLELPVARFEALQALLVDLSRGQVRPQRLDA" misc_feature 192377..192943 /locus_tag="PA0168" /note="Putative translation regulator, IMPACT (imprinted ancient) protein family [General function prediction only]; Region: YIH1; COG1739" /db_xref="CDD:441345" gene complement(192965..193672) /locus_tag="PA0169" /db_xref="GeneID:879346" CDS complement(192965..193672) /locus_tag="PA0169" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248859.1" /db_xref="GeneID:879346" /translation="MRLERIARISDGFQSMAREQNLSLSERYHKQLRRLEKVARISDR YQQMMRDLNLALKEASIRDPLTGLPNRRMLLERLREENERSQRHGQSYVLAMLDVDFF KQVNDTWGHDSGDRVLVEIARAMESELREYDLCGRWGGEEFLLLLPQTRLQDAGPVLE RVRDSVRTLAVRVGTEALSVTASVGVTEHRIGETYSQTVNRADAALLDAKRSGRDKCV FAALPPLPAPSRPAPAR" misc_feature complement(193022..193669) /locus_tag="PA0169" /note="biofilm regulation diguanylate cyclase SiaD; Region: diguan_SiaD; NF038266" /db_xref="CDD:468439" gene complement(193799..194179) /locus_tag="PA0170" /db_xref="GeneID:878493" CDS complement(193799..194179) /locus_tag="PA0170" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248860.1" /db_xref="GeneID:878493" /translation="MSDLHIPGTQSTPAIQGDWQAGRLSMQGDSYPENSYELFGQVID WVERFLADGQRPLELDLRLLYLNTSSIKAMMDILDLLEEAHQGGRPVSLRWHYDRRNE RVAELAEEFREDCSFPFAIQAHDE" misc_feature complement(193811..194176) /locus_tag="PA0170" /note="biofilm regulation phosphoprotein SiaC; Region: phos_prot_SiaC; NF038265" /db_xref="CDD:439565" gene complement(194206..194748) /locus_tag="PA0171" /db_xref="GeneID:882156" CDS complement(194206..194748) /locus_tag="PA0171" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248861.1" /db_xref="GeneID:882156" /translation="METLDLLAMRESYTRQRILLCFNGPISRSLIEEIGHALRNYLHA EQAKPSEAMDVFAVYIEMTQNIRHYANLKGYGEHEAAATVAIARNEDGHYVVSAGNLV ERDDGQSLVRSIQAIANLDKAALKAAYKEQLRRPRDSGCASGAGLGLLDIARKSSEPL AASLKEQPDGRAFFSLRAVI" misc_feature complement(194209..194736) /locus_tag="PA0171" /note="biofilm regulation protein kinase SiaB; Region: kinase_SiaB; NF038264" /db_xref="CDD:439564" gene complement(194757..196748) /locus_tag="PA0172" /db_xref="GeneID:879545" CDS complement(194757..196748) /locus_tag="PA0172" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248862.1" /db_xref="GeneID:879545" /translation="MAANWGLRGKSVVALLLACALALVPAVLLGWRAMDDIRTHFGLA YAKNFTLLHRQKILAPVSRELALSRRFAESVVTRDWLLKEDDPARRALFFREAEGYRG DFRDHAYFIIASGSHHYYFNDGRQPYSERPRYTLEAGDPEDAWYFNTLRNSAAYNINV NVDSKLNLTKVWFNLVIRDQGRPIGLAGSGLDLSGFLDDFIIAREPGVTPMIVGDDGA IQAHPDRRLIAYSSAAGGASERHRVFDLLDQPEQRDALREAMRLARAKAGSVHCLWAG LDGRQQLFAVAYIPQLRWYVLTAVDLHAAQVLDNRWLWPLAGTFLLLLVALLLGFAYA VERLLLRPLRSLKRSAKAIAAGRYDTPLPLARQDEIGSLSKAFASMADQVRRHTAELE DKVQERTQALEEANREMAAAQKKIGDSLDYASLIQRAILPDRQLSATLGEHHFILWKP RDVVGGDFYVYREQADGYLIGVVDCAGHGVPGALMTMLARAAIDHAIEAVGSRDPAAI LGETDQAMRSMLSQEQIPQALATNMDAGLVWVDRRRRQLAFAGAKISLYASDGEEVQE LKGARRAIGDKRRGDYRNIEVPLAPGWTFYLSTDGFLDQAGGEHGFGFGSRRFADMLR DHARQPLPEQAEAFVATLAEYQGEHPQRDDITILSFRFD" misc_feature complement(194760..196733) /locus_tag="PA0172" /note="biofilm regulation protein phosphatase SiaA; Region: prot_phos_SiaA; NF038263" /db_xref="CDD:439563" protein_bind 196874..196886 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0172" /bound_moiety="AmrZ" protein_bind complement(196901..196913) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0172" /bound_moiety="AmrZ" gene complement(197011..198060) /locus_tag="PA0173" /db_xref="GeneID:882256" CDS complement(197011..198060) /locus_tag="PA0173" /EC_number="3.1.1.61" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis response regulator protein-glutamate methylesterase" /protein_id="NP_248863.1" /db_xref="GeneID:882256" /translation="MPISVLVVDDSALIRSLLKEIIQADPELRLVGCAPDAFVARDLI KQHAPDVISLDVEMPRMDGLTFLDKLMKARPTPVLMISSLTERGSEATLRALELGAVD FIAKPRLGIAEGMQAYAEEIRAKLKTVARARLRRRAADAPAPPESAAPLLSTEKIIAL GASTGGTEALKEVLLGLPAHSPGVVITQHMPPGFTRSFAERLDRLTRLSVSEARDGDR ILPGHALVAPGDHHMEVQRSGANYVVRLNRQAQVNGHRPAVDVMFESLARCAGRNLLA GLLTGMGKDGARGLLAIRQAGGYTLAQDEATCVVYGMPREAVELGAAEDVLPLERIAA ALLQQAARRGSGNRL" misc_feature complement(197065..198060) /locus_tag="PA0173" /note="chemotaxis-specific protein-glutamate methyltransferase CheB; Region: PRK00742" /db_xref="CDD:234828" gene complement(198080..198682) /locus_tag="PA0174" /db_xref="GeneID:877836" CDS complement(198080..198682) /locus_tag="PA0174" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248864.1" /db_xref="GeneID:877836" /translation="MNLQAREGAPLNRYYDPYFACDAVKLLPGEYFASGEDLVIVTVL GSCVSVCLRDPLNGIAGMNHFMLPERGLGGDPASPSARYGSHAMELLINRMLALGASR ERLQAKVFGGGSVLRQISAAIGQRNVEFTLDYLATERIPLLASDVLEAFPRKIYFFPR NGRVLVKSLVELKNDTVLQRERDYRRRIDRNADGGPIDLF" misc_feature complement(198083..198682) /locus_tag="PA0174" /note="chemoreceptor glutamine deamidase CheD; Provisional; Region: PRK13495; cl00810" /db_xref="CDD:469935" gene complement(198688..199530) /locus_tag="PA0175" /db_xref="GeneID:882282" CDS complement(198688..199530) /locus_tag="PA0175" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis protein methyltransferase" /protein_id="NP_248865.1" /db_xref="GeneID:882282" /translation="MPTSTPSPVFGNQEFHYTREDFQQVRERLYRLTGISLAESKAQL VYSRLSRRLRLLRLGSFAEYFTHLDREPGEQQLFVNALTTNLTAFFRERHHFPLLADL ARRQLQRHRPLRIWSAAASTGEEPYSIAITLVEALGSFDPPVKIVASDIDTGVLDCAR QGVYPLERLEQMPAPLKKRFFLRGTGPNAGKARVVEELRQLVEFRQINLLEADWSIAG ELDAIFCRNVMIYFDKPTQTRLLERMVALLRPEGLFFAGHSENFVHASHLVRSVGQTV YSPA" misc_feature complement(198700..199467) /locus_tag="PA0175" /note="protein-glutamate O-methyltransferase CheR; Region: PRK10611" /db_xref="CDD:236725" gene complement(199600..201639) /gene="aer2" /locus_tag="PA0176" /db_xref="GeneID:882219" CDS complement(199600..201639) /gene="aer2" /locus_tag="PA0176" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="aerotaxis transducer Aer2" /protein_id="NP_248866.1" /db_xref="GeneID:882219" /translation="MGLFNAHAVAQQRADRIATLLQSFADGQLDTAVGEAPAPGYERL YDSLRALQRQLREQRAELQQVESLEAGLAEMSRQHEAGWIDQTIPAERLEGRAARIAK GVNELVAAHIAVKMKVVSVVTAYGQGNFEPLMDRLPGKKAQITEAIDGVRERLRGAAE ATSAQLATAAYNARIKSALDNVSANVMIADNDLNIIYMNRTVSEMLGRAEADIRKQLP NFDAGRLMGANIDVFHKNPAHQRHLLANLTGVHKAELNLGGRRFSLDVVPVFNDANER LGSAVQWTDRTEEHRAEQEVSQLVQAAAAGDFSKRVEEAGKEGFFLRLAKDLNSLVDT ADRGLRDVSRMLGALAQGDLTQRIEADYQGTFGQLKDFSNDTAQSLSRMLGQIREAAD TINTAASEIASGNAELSARTEQQASSLEETASSMEELTSTVKLNAENARQANSLAANA SEVATQGGTVVQKVVSTMSSINESARKIADIIGVIDGIAFQTNILALNAAVEAARAGE QGRGFAVVAGEVRTLAQRSAAAAKEIKTLISDSVDKVENGNTLVAQAGQTMSDIVVAI RRVTDIMSEIAAASAEQSTGIEEVNSAVSQMDDMTQQNAALVEEAAAAAEAMQEQAGL LNQSVAVFRLDTPPSVVQLASARPSAPRPSAPAPLARSGMARASKARKEDGWEEF" misc_feature complement(201475..201609) /gene="aer2" /locus_tag="PA0176" /note="first HAMP domain of aerotaxis transducer Aer2 and similar domains; Region: HAMP_I; cd17529" /db_xref="CDD:381746" misc_feature complement(order(201475..201480,201487..201492, 201496..201501,201508..201513,201559..201561, 201568..201570,201574..201579,201583..201591, 201595..201600)) /gene="aer2" /locus_tag="PA0176" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:381746" misc_feature complement(201307..201444) /gene="aer2" /locus_tag="PA0176" /note="Histidine kinase, Adenylyl cyclase, Methyl-accepting protein, and Phosphatase (HAMP) domain; Region: HAMP; cl01054" /db_xref="CDD:470050" misc_feature complement(201172..201300) /gene="aer2" /locus_tag="PA0176" /note="HAMP N-terminal domain 3; Region: HAMP_N3; pfam18575" /db_xref="CDD:465808" misc_feature complement(<200722..201126) /gene="aer2" /locus_tag="PA0176" /note="Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms]; Region: NtrB; COG3852" /db_xref="CDD:443061" misc_feature complement(200518..200724) /gene="aer2" /locus_tag="PA0176" /note="HAMP domain; Region: HAMP_2; pfam18947" /db_xref="CDD:465927" misc_feature complement(199603..>200595) /gene="aer2" /locus_tag="PA0176" /note="Methyl-accepting chemotaxis protein (MCP), signaling domain; Region: MCP_signal; cl46910" /db_xref="CDD:481250" misc_feature complement(order(199828..199833,199840..199842, 199849..199854,199858..199863,199870..199875, 199879..199884,199891..199893,199900..199905, 199912..199914,199921..199926,199933..199938, 199942..199947,199954..199956,199963..199968, 199975..199977,199984..199989,200026..200031, 200038..200043,200047..200052,200059..200064, 200071..200073,200080..200085,200092..200094, 200101..200103,200113..200115,200134..200136, 200143..200145,200155..200157,200164..200169, 200176..200178,200185..200187,200194..200199, 200206..200211,200218..200220,200227..200232, 200236..200238,200248..200253,200257..200262, 200269..200271,200278..200283,200290..200295, 200302..200304,200311..200316,200323..200325, 200332..200337,200341..200346,200353..200355, 200362..200367,200374..200379)) /gene="aer2" /locus_tag="PA0176" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:206779" misc_feature complement(200068..200169) /gene="aer2" /locus_tag="PA0176" /note="putative CheW interface [polypeptide binding]; other site" /db_xref="CDD:206779" gene complement(201675..202160) /locus_tag="PA0177" /db_xref="GeneID:879338" CDS complement(201675..202160) /locus_tag="PA0177" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="purine-binding chemotaxis protein" /protein_id="NP_248867.1" /db_xref="GeneID:879338" /translation="MNGTEASQANGPAQEYLTFTLGREEYAIDILRVQEIRGYDQVTA IANAPPFIKGVINLRGAIVPIVDLRIKFHLAEVTYDPFTVVIILNIGRRIVGVVVDSV SDVIALGGDAIRPPPEFGASFDTEYLLGLATAGERMLILVDIERLMTSREMALVDEAA A" misc_feature complement(201678..202121) /locus_tag="PA0177" /note="CheW-like domain. CheW proteins are part of the chemotaxis signalling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and...; Region: CheW_like; cl00256" /db_xref="CDD:469692" misc_feature complement(order(201705..201728,201885..201887, 201891..201893,201975..201992)) /locus_tag="PA0177" /note="putative CheA interaction surface [active]" /db_xref="CDD:238374" gene complement(202147..204066) /locus_tag="PA0178" /db_xref="GeneID:878420" CDS complement(202147..204066) /locus_tag="PA0178" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_248868.1" /db_xref="GeneID:878420" /translation="MPQDMSQFLQVFFEETEEHLATLELLLIGLDLDRPDSETLHGIF RAAHSIKGSSGMFGFDDITAVTHELETLLDRIRCGQMHLRPDMISSFLEARDVLQRLL DAHRSGRPDPGVPLLETVERLRGWLRVPEQEAAEEGFGLFDDAPARETADDDAFGFFD EGPGAPERAAAPEAFGLFDEAPGAPAASEAFGLFDEAPGSPPAEERAFGLFDGAPGSP AAPSAPAQAVAAPARGAVAPVRGDGESGSIRVSVEKIDSLINLVGELVITQAMLGQLG EQLDPSRHERLQHALAQLEHNTRDLQESVMSIRMLPINFIFSRFPRLVRDTATRLGKQ VELHLHGEHTELDKSVIEKLSDPLTHIVRNSIDHGIETPAERLAAGKPASGTVKLAAS HQGGSVVVEVSDDGRGLSRPRILAKARERNLPVHDGMSDAEVWQLVFMPGFSTAETVT ELSGRGVGMDVVKRNIGAMGGRIDIDSAPGMGTRIGIRLPLTLAILDGLIVAVEAVNY VIPLTYIVESLQARSDDVRGLGGEDNAMIRVRGEYLPLFSLHELLRIGGEAPAPEQGI VVILESEGRSFALQVDELVGQQQVVIKSLEQNFRRVEGIAGATIMGDGSVALILDVDA LPRLAAREDTADERH" misc_feature complement(202159..204057) /locus_tag="PA0178" /note="Chemotaxis protein histidine kinase CheA [Signal transduction mechanisms]; Region: CheA; COG0643" /db_xref="CDD:440408" gene complement(204094..204459) /locus_tag="PA0179" /db_xref="GeneID:879259" CDS complement(204094..204459) /locus_tag="PA0179" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_248869.1" /db_xref="GeneID:879259" /translation="MGKPILIVDDSASIRQMLSFTLKSAGYEVDEAADGKEGLGKAQS KSYSLVFTDQNMPNMDGLSLIRSLRNLAGYRSVPILMLTTESSDAMKQQGRSAGATGW LVKPFDPPKLLEVTRKVLP" misc_feature complement(204100..204453) /locus_tag="PA0179" /note="phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins; Region: REC_CheY4-like; cd17562" /db_xref="CDD:381110" gene complement(204657..205829) /gene="cttP" /locus_tag="PA0180" /db_xref="GeneID:879336" CDS complement(204657..205829) /gene="cttP" /locus_tag="PA0180" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="trichloroethylene chemotactic transducer CttP" /protein_id="NP_248870.1" /db_xref="GeneID:879336" /translation="MRESLGVSLPSRPLLLKLGLLSLPWALCAGLHAVGLGVWLVLAL GWFASLAMLVLLLRAPRQAVANANPQADAASPAWSAAQRALADETAQLDGHARQIDEL LHSAIRQLSDSFHGLAERIDTQRGLSHSLIERYDGRGQVDEGINFQDFVRTTQQTLSL FVEATLETSRTSQQLVERMDQVRLKITEILQSTQDMDAIAKQTNLLALNAAIEAARAG ESGRGFAVVADEVRALSTRSTEFSAAIRKHVDVVHHEIQDAESAISQLADKDMSFALD SKHKIQGMLDDLEAMNRHTLKVIHELDRLSLEVGQGVDAAVTALQFQDMGSQLLGQMR KHHARLGAFALGLGALEARPRQEWPERVAREVEELRRPLPSPVSQNSVNVGEVELF" misc_feature complement(204888..>205688) /gene="cttP" /locus_tag="PA0180" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene complement(206022..206954) /locus_tag="PA0181" /db_xref="GeneID:879304" CDS complement(206022..206954) /locus_tag="PA0181" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248871.1" /db_xref="GeneID:879304" /translation="METLSNIQCFVRSAEAGSFAEAARRLGLTPAGVGKNVARLESNL GVRLFQRSTRRLTLTEAGERFLQEVGGSLEGIQTALANVSSVGNQPSGTLKVSMGLAF GRDYILPLLGEFLERYPDIVPDWHFDNRQVDLIGEGFDAAIGGGFELPPGVVARNLTP GHLILLASPTYLRDKPPIRHPGDLGGFDGIRIRSPQTGRVRSWPLRRRNGEEAPIELR ERMTMSDPEATCEVAAMGLGITLVCMQHAYAYLESGALVRVLPDWYVDAGNTSLYYAA NKLLPAKTRVFVDFVVDYFRRQDLARRFSAFPTG" misc_feature complement(<206526..206945) /locus_tag="PA0181" /note="DNA-binding transcriptional regulator DsdC; Region: PRK10086" /db_xref="CDD:182231" misc_feature complement(206082..206681) /locus_tag="PA0181" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature complement(order(206145..206147,206226..206228, 206277..206279,206472..206474,206478..206480, 206520..206522,206637..206639,206649..206651)) /locus_tag="PA0181" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature complement(order(206250..206252,206259..206264, 206283..206297,206391..206393,206574..206594, 206598..206600,206610..206612,206619..206624, 206628..206633,206643..206648)) /locus_tag="PA0181" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 207071..207823 /locus_tag="PA0182" /db_xref="GeneID:878164" CDS 207071..207823 /locus_tag="PA0182" /EC_number="1.1.1.100" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="3-ketoacyl-ACP reductase" /protein_id="NP_248872.1" /db_xref="GeneID:878164" /translation="MSVSSASLAGKVAFVQGGSRGIGAAIVRRLAAEGASVAFTYVSS ADKSRALAAELEGAGASILALHADSADAAALVAAVDEAAARFGRIDILVNNAAVLALG SVEELPLADFERTLAINVRSVFVATQAAVKHMGDGGRVISIGSTNAERMPFAGGATYA MSKSALVGLTKGLARDLGPRGITVNNVQPGPVDTDMNPDDGDFAEALKGLMALPRYAR SEEIASFVAYLAGPEAAYITGASLTIDGGFSA" misc_feature 207089..207820 /locus_tag="PA0182" /note="3-ketoacyl-(acyl-carrier-protein) reductase; Validated; Region: fabG; PRK05557" /db_xref="CDD:235500" gene complement(207923..209533) /gene="atsA" /locus_tag="PA0183" /db_xref="GeneID:879288" CDS complement(207923..209533) /gene="atsA" /locus_tag="PA0183" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="arylsulfatase" /protein_id="NP_248873.1" /db_xref="GeneID:879288" /translation="MSKRPNFLVIVADDLGFSDIGAFGGEIATPNLDALAIAGLRLTD FHTASTCSPTRSMLLTGTDHHIAGIGTMAEALTPELEGKPGYEGHLNERVVALPELLR EAGYQTLMAGKWHLGLKPEQTPHARGFERSFSLLPGAANHYGFEPPYDESTPRILKGT PALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPR EIVEKYRGRYDAGPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKS ARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPD LLGFLDRHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYP RLSRQGAISHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEA AHDENTVTGWELFGMRAIRQGDWKAVYLPAPVGPATWQLYDLARDPGEIHDLADSQPG KLAELIEHWKRYVSETGVVEGASPFLVR" misc_feature complement(208028..209527) /gene="atsA" /locus_tag="PA0183" /note="Bacterial Arylsulfatase of Pseudomonas aeruginosa and related proteins; Region: PAS_like; cd16025" /db_xref="CDD:293749" misc_feature complement(order(208409..208411,208580..208585, 208901..208903,209189..209191,209195..209197, 209381..209383,209492..209497)) /gene="atsA" /locus_tag="PA0183" /note="active site" /db_xref="CDD:293749" misc_feature complement(order(208409..208411,208580..208582, 208901..208903,209189..209191,209195..209197, 209381..209383,209492..209497)) /gene="atsA" /locus_tag="PA0183" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:293749" gene complement(209621..210460) /locus_tag="PA0184" /db_xref="GeneID:882170" CDS complement(209621..210460) /locus_tag="PA0184" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_248874.1" /db_xref="GeneID:882170" /translation="MNAFTAPATGTPLVSFRQVRKHFAVDGRRLEAIQQFDLEIGEGE FIAIVGASGCGKSTLLRLLIGLDRDYDGEIRVDGRPIAGIGGERGIVFQEHRLFPWLT VQQNVALGLVNEALGETDKAARIDEYIRLVGLHGFERAYPHQLSGGMAQRVAIARGLV ASPRLLLLDEPFSALDALTRQQLQEELLAIRRRTRITTLLVTHDVEEALYLADRVVVM EPRPGRIRRVVEVGLAHPRERGGFDFLRQREALLHELTADGEYVAPPPRRVENLPFEF IAC" misc_feature complement(209681..210439) /locus_tag="PA0184" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]; Region: TauB; COG1116" /db_xref="CDD:440733" gene complement(210457..212073) /locus_tag="PA0185" /db_xref="GeneID:879256" CDS complement(210457..212073) /locus_tag="PA0185" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_248875.1" /db_xref="GeneID:879256" /translation="MKNIDKTLSPAWSRPLPRLAPPPSAAFARRLGDGLLPWLLPLGL ALLWWVASHRHWMSAQVLPTPELVWQSARELLAGELWSELAISLRRLAWGLLAGVASG AALGAWLGFSPRAERLVFPTFSALAQIPTLAWIPLFMLFFGIGELLKLVVLVKAVVVP VTIHTLVGVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGWTSL LAVELLASSEGIGYLMVQGRQLFMLDIVFVCILIIGLVGVGMDRAIQWLDRRLLHWPQ AATGEFRRRPPGRGWQRLQVWLPPLALLLLWQSASSAEWVDPAILASPLEVARATWSG ALDGSLPGALFDSLKRTLGGLLLGGGLGFLGGLLLGLWRPAERFFGPTFAALRQVAIF AWVPLLTAWFGLGEPAKLTFVAIAAFFPLLLATQRGIASLPPSLGEAARVLRLGPWRR LLRLVLPGAAPSVFAGLRLALIYAWLGTIGAEYFMPSDGGIGSLMIGAQQLFRMDLIG AGMLLVGLTGALLNALGQRIEARATRWRHA" misc_feature complement(211252..211926) /locus_tag="PA0185" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]; Region: TauC; COG0600" /db_xref="CDD:440365" misc_feature complement(210466..211227) /locus_tag="PA0185" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]; Region: TauC; COG0600" /db_xref="CDD:440365" gene 212340..213401 /locus_tag="PA0186" /db_xref="GeneID:879411" CDS 212340..213401 /locus_tag="PA0186" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_248876.1" /db_xref="GeneID:879411" /translation="MKALTSSLLGLFAAPVLAGLLGAYVPLASAAPPKEIRIAVPDVS AGSSHSGGGVVDVLYTRQLLEKEFANDGIAVKWSFFKGAGPVVNEAFANGQVDFAYLG DLAAIIGKSGGLDSRLLAATARGVNHYLGVQPGSGIKTLEDLKGKRVGIFRGTASQLS FDNALASVGLSEKDLKVINLDFSAALSALAARQIDATWGLAGLFALRDRGLAEIPLST RDLNGAGTLQALLVGSGAFVDAHPDITERLLKVQLQAQDWLAREENRDAYIELVSKQA SYPVVILQSEYRGRKLGDALSPRLDADFLGRLDASIQAAKRFGLIRREFSAEQWAAPE LLEAAGKLAKAKAVAQAAE" misc_feature 212445..213242 /locus_tag="PA0186" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" gene 213819..214634 /locus_tag="PA0187" /db_xref="GeneID:882255" CDS 213819..214634 /locus_tag="PA0187" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248877.1" /db_xref="GeneID:882255" /translation="MNLDSKLFDATLDLERVKVSVRTLVKLSRQEQSAIIRTLNEFGF LLLRSEHGEDRQELLALKELFGRAAPHPRADADGIVPISNARYVSGYLGSTPLEHKLH TDGAFLDTPEQLCSLQCVRNAREGGETLLASAGLAFERLRRRMPTKHLGLLRGDALTI VRKHQSSTQPVFRLNGEALGIKFRQNDGAAEVVEHPVAVEAFAELVAALEDPACQLRI KLEPGEILVLDNTAVLHGRTAFCANELREMRRLNFDGHGRLRAELELGFKVGL" misc_feature 213828..214592 /locus_tag="PA0187" /note="Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases...; Region: CAS_like; cd00250" /db_xref="CDD:238154" misc_feature order(214059..214064,214131..214133,214137..214139, 214152..214154,214305..214307,214575..214577, 214581..214583) /locus_tag="PA0187" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:238154" misc_feature order(214122..214124,214128..214130,214203..214205, 214521..214523,214563..214565) /locus_tag="PA0187" /note="active site" /db_xref="CDD:238154" misc_feature order(214122..214124,214128..214130,214521..214523) /locus_tag="PA0187" /note="iron coordination sites [ion binding]; other site" /db_xref="CDD:238154" gene 214631..215512 /locus_tag="PA0188" /db_xref="GeneID:879289" CDS 214631..215512 /locus_tag="PA0188" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248878.1" /db_xref="GeneID:879289" /translation="MIAQFVAVVLPILICTGIGFAWSRSAGPVDTRALVFLVANVGFP CLLLSSLDRPGLSIGMVAGVFLATALAVLAFALLGLVALRLLRMPVRRYLPSIMLPNS GNMGIPIAYLAFGEEALVYAVAFSTLIQVGHATLGVWFASGDITPASILRNPMIYALA VALGLIALGWSLPPPLRDVTRLLGGITVPLMLVMLGLSLAGLRLHETWRPLLLSLVRV WGGFAVGYGIAAGLGMAAVAAGTFAIQCGMPTAVLTYLLAKRYDGPVNEVAGMVLITT LLVLLSTPLFIQLLPRA" misc_feature 214640..215446 /locus_tag="PA0188" /note="Predicted permease, AEC (auxin efflux carrier) family [General function prediction only]; Region: YfdV; COG0679" /db_xref="CDD:440443" gene complement(215550..216908) /locus_tag="PA0189" /db_xref="GeneID:883120" CDS complement(215550..216908) /locus_tag="PA0189" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="porin" /protein_id="NP_248879.1" /db_xref="GeneID:883120" /translation="MQNLRRAVFAGLVAGTLSEGAAATAGDGGFVEDSELQFLARTYY FNRDYRDSPNNAGRNRFKPRSERNGYREEATQGLRLQFASGYTPGSLGFGLDAHAMLG LQLDSGGGRTGTGNLPVGADGHPDHRYGKVGGALRLRHGETRLKYGQTTTSAPVFAAS SNRTLAGMAYGLLLEDRSFDGLLLEGGRFTAASGPGESKVRGDISTVYGRLGAYPVRL DAVGFLGGQWQATERLQLSLYASRFDDIWQQAYFGASHRQPLGGERALRVDLDAYRTR DSGQSRFGRIDTLTSSLALGYEHGPQRITLAYQRVHGEQPFDYMAFGDGRSSASMVLA NSVGYSDFNGPGERSWQLRYDLDLGALGLPGLSLHALHARGRAGASASSAAESIYAGL YGRDGRHRENDLGFAYRVKAGPLAGLALRASQAWHRGNASYLDGDIDETRLVVDYSRS IW" misc_feature complement(215559..216821) /locus_tag="PA0189" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene 217156..217881 /locus_tag="PA0190" /db_xref="GeneID:883097" CDS 217156..217881 /locus_tag="PA0190" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acid phosphatase" /protein_id="NP_248880.1" /db_xref="GeneID:883097" /translation="MNNKTLCPSLLLCLSLLAPLSCLGETAAAPYPLAHPPRLADYLP PPPAADSAAAVADLGAVLEAQRLRTPEQVRRVRAHDQWEDNVFPFAGDLLGASFDKER LPLTRSFFNRAQENLVEVLMPAKKHFARPRPYEVTPKVKPVLPPPEGESYPSGHTMDS YFKASLLSMLVPEHHDAFFARAEEHAQSRVLAGVHFPSDLEGGQTAAAALVASLLADP AVAADFAAVREELRGALGLPKLQ" misc_feature 217231..217851 /locus_tag="PA0190" /note="PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains...; Region: PAP2_acid_phosphatase; cd03397" /db_xref="CDD:239491" misc_feature order(217528..217530,217549..217551,217615..217623, 217720..217722,217738..217740,217750..217752) /locus_tag="PA0190" /note="active site" /db_xref="CDD:239491" gene complement(217905..218822) /locus_tag="PA0191" /db_xref="GeneID:883101" CDS complement(217905..218822) /locus_tag="PA0191" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248881.1" /db_xref="GeneID:883101" /translation="MDLRQLRYFIALAEHRSFVRAADAMGITQPAFSRSIQGLEQELG CQLVDRGSKDLRPTPEGQVVLQHALSLVQGSANLIHEIAQLNKLDAGELRFGSGPAPA QQLVPDAVADFINRHPRVQISLDVDNWEKLSRALLREEIEFFVADIRDFEADPNFQTR PLTPRRGQFFCRPQHPLLGKDSLSTNDLFNYPLASTLIPPGIRKLLANLSGKIDFAAN IRCENMHALIRIVRQTDAIGIASDETLRPYLQRGELQPLQWRNLPQNLDSLSARCGII SRSGYRLSAAAKAMIETLVELDQAQHAAA" misc_feature complement(217935..218822) /locus_tag="PA0191" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 219172..221544 /locus_tag="PA0192" /db_xref="GeneID:882990" CDS 219172..221544 /locus_tag="PA0192" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="TonB-dependent receptor" /protein_id="NP_248882.1" /db_xref="GeneID:882990" /translation="MKHHYRLPLRRTPPGGSDYALALLLALGGALPASAADAPAPAEE APPLAGSAPAKADTALGKVTVTARRREEDSQKVPTPITVLGGETLEAQRISRVQDLQQ VLPSVNVAYIHARQSSVAVRGIGNNPASDGLEGSAGIYLDNVYLGRPGMAVFDLLDIE QLELLRGPQGTLFGKNTTAGVLNISTRAPTFTAERTVEVSGGQDGYFQGRGTVSGPLG ETLAGRLSAYRTRDDGYIKNIHDDNYLNGGERQGARGQLLFEPNEDFSLRWIADYNEE DSSNGSMVVYGGAERFWQRAALVGASPLRDPQRRKVNINGRQHVSVHQGGSSLEANWN LAGGYRLTSISAYRYWHFTPANDEQLNVSAINDTGVEVHDRQFSQEIRLASPTGGAFD YVVGAYAFRQNLGNKTFTSYGPLADLYLLGANLGALNDTYSKANGKIETDSFALFAQG TWHLTERLDFTAGLRGTYEEKNAKVERFAPLGGAAVGGVGAAVRNGQLGAYDSGDLSQ YNFAPSALLSLSYQFSDDLLGYASLSHGEKSGGVNLAVGSAPSAGADSLLVGPERAND AELGLKSTLFDRRLLLNANLFWTGIHGYQATTLYQAPGSTQLVQVLANAGSVRSRGLE FEATALPLRGLTLNFNGSYNDVTYLSFKDAPCPAEVSTRPGAPSSCDLTGQRVVGASK WIANLNGEYQWRLDDRFQPYVSASYAYRSAAEGTLDNSDLSKIDGYALVNLAAGLRSD LGDGQLDTSVWLKNAFDKDYYLSAFASINGSYTASVGQPRTLGVSLRYDF" misc_feature 219349..221490 /locus_tag="PA0192" /note="Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; Region: CirA; COG1629" /db_xref="CDD:441236" gene 221585..222487 /locus_tag="PA0193" /db_xref="GeneID:883039" CDS 221585..222487 /locus_tag="PA0193" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248883.1" /db_xref="GeneID:883039" /translation="MSNAAQALATPVRLDIRPVAGRIGAEIRGVTLSGELDAATVEAI QAALVRHKVIFFRDQSHLDDQTQEAFAHLLGEPVAHPTVPSREGTRFLLELDGAEGRR ANSWHTDVTFVEAYPKASILRSVVAPESGGDTVWANTASAYADLPAELRELADRLWAV HSNEYDYAGVKPSASVEQLENYRKVFTSTVYETEHPVVRVHPQSGERTLLLGHFVKRL KGLSQHDSAHLFAVLQGHVTRLENTVRWRWQAGDVAIWDNRATQHYAIDDYGDQPRVV RRVTLGGDVPVGIDGQRSRTIRKA" misc_feature 221621..222442 /locus_tag="PA0193" /note="Taurine dioxygenase, alpha-ketoglutarate-dependent [Secondary metabolites biosynthesis, transport and catabolism]; Region: TauD; COG2175" /db_xref="CDD:441778" gene 222555..223454 /locus_tag="PA0194" /db_xref="GeneID:879577" CDS 222555..223454 /locus_tag="PA0194" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248884.1" /db_xref="GeneID:879577" /translation="MSQSATARQPEPEVAEAFRITPLEAPLGAEVRGLDARRPLAPEQ VLALKQALREHHILVFRQQHLDDEQYLRFATLFGSVFQPPADIPVLSSGGDGKVPDIV KVANTGDGELGNFALPAHIDHQWTPVPSSGSFLYALEVPSSGGETRFTNLARAYESLD EATRREIDGLRLINYNPFIRLREGGYGGGFATYRTPDIEPIQGSEHPLVRTHPESGRR VLFLSAHTEVEIPGYDPARGQALIGRLREHLARPELSYSHAWSVGDIVWWDNQAVLHA RNAFPASERRRLKRISLAGSRPF" misc_feature 222600..223448 /locus_tag="PA0194" /note="Taurine dioxygenase, alpha-ketoglutarate-dependent [Secondary metabolites biosynthesis, transport and catabolism]; Region: TauD; COG2175" /db_xref="CDD:441778" protein_bind 223543..223555 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0195" /bound_moiety="AmrZ" gene 224101..225219 /gene="pntAA" /locus_tag="PA0195" /db_xref="GeneID:878345" /db_xref="PseudoCap:PA0195" CDS 224101..225219 /gene="pntAA" /locus_tag="PA0195" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NAD(P) transhydrogenase subunit alpha" /protein_id="NP_248885.1" /db_xref="GeneID:878345" /db_xref="PseudoCap:PA0195" /translation="MQIGVPLETHAGETRVSATPETVKKLIGQGHQVIVQSGAGVSAS QPDSAYEAAGATIGSAAEAFGADLVLKVVAPSAAELAQMKSGAVLVGMLNPFDNENIA RMAERGITAFALEAAPRTSRAQSLDVLSSQANIAGYKAVMLAANHYPRFMPMLMTAAG TVKAARVLILGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFVDVPYETD EERECAEGVGGYARPMPASWMERQAKAVHERAKQSDIVITTALIPGRKAPTLLHEATV AEMKPGSVVIDLAAAQGGNCPLTEADQVVVRHGVTIVGHSNLAALVPADASALYARNI LDFLKLTLNAEGFSVNLEDDIVAACLMCRDGQAVRKNG" misc_feature 224101..225195 /gene="pntAA" /locus_tag="PA0195" /note="Rubrum transdehydrogenase NAD-binding and catalytic domains; Region: Rubrum_tdh; cd05304" /db_xref="CDD:240629" misc_feature order(224143..224145,224317..224319,224374..224376, 224971..224973,225049..225051,225055..225057) /gene="pntAA" /locus_tag="PA0195" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:240629" misc_feature order(224230..224232,224470..224475,224500..224505, 224512..224517,224524..224529,224533..224538, 224542..224559,224563..224565,224569..224577, 224584..224586,224653..224658,224941..224946, 225070..225075,225085..225087,225094..225099) /gene="pntAA" /locus_tag="PA0195" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:240629" misc_feature order(224455..224460,224470..224472,224479..224481, 224488..224490,224611..224622,224680..224688, 224791..224793,224824..224826,224875..224883, 224902..224904,224908..224910) /gene="pntAA" /locus_tag="PA0195" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:240629" misc_feature order(224461..224466,224470..224472,224500..224502, 224629..224634,224653..224655,224701..224706, 224710..224721) /gene="pntAA" /locus_tag="PA0195" /note="trimer interface B [polypeptide binding]; other site" /db_xref="CDD:240629" misc_feature order(224560..224574,224581..224583,224590..224592, 224659..224661,224665..224667) /gene="pntAA" /locus_tag="PA0195" /note="trimer interface A [polypeptide binding]; other site" /db_xref="CDD:240629" gene 225295..225603 /gene="pntAB" /locus_tag="PA0195.1" /db_xref="GeneID:878346" CDS 225295..225603 /gene="pntAB" /locus_tag="PA0195.1" /codon_start=1 /transl_table=11 /product="NAD(P) transhydrogenase subunit alpha" /protein_id="NP_248886.2" /db_xref="GeneID:878346" /translation="MDIISDGIYNLIIFVLAVYVGYHVVWNVTPALHTPLMAVTNAIS AIVIVGAMLAAALTVTPLGKAMGTLAVALAAVNVFGGFLVTRRMLEMFKKKAPKAGGH " misc_feature 225325..225576 /gene="pntAB" /locus_tag="PA0195.1" /note="4TM region of pyridine nucleotide transhydrogenase, mitoch; Region: PNTB_4TM; pfam12769" /db_xref="CDD:463694" gene 225603..227039 /gene="pntB" /locus_tag="PA0196" /db_xref="GeneID:878146" CDS 225603..227039 /gene="pntB" /locus_tag="PA0196" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="pyridine nucleotide transhydrogenase subunit beta" /protein_id="NP_248887.1" /db_xref="GeneID:878146" /translation="MSMNLVTLLYLIASVCFIQALKGLSHPTTSRRGNLFGMVGMAIA VATTVGLVFKLGAEIATTGVGYIVVGLLVGGTAGSIMAKRVEMTKMPELVAFMHSMIG LAAVFIAIAAVVEPQSLGIVAHLGDTIPTGNRLELFLGAAIGAITFSGSVIAFGKLSG KYKFRLFQGTPVQFSGQHLLNLVLGLATLGLGLVFMFTGNLTAFAVMLALAFVLGVLI IIPIGGADMPVVVSMLNSYSGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAM NRSFFNVILGGFGAEADAGGPAGSKEQRPVKSGSADDASFLLTNADSVIIVPGYGLAV ARAQHALMELAEKLTHRGVTVKFAIHPVAGRMPGHMNVLLAEAEVPYEQVFEMEDINS EFGQTDVVLVLGANDVVNPAAKNDPKSPIAGMPILEAYKAKTVIVNKRSMASGYAGLD NELFYLDKTMMVFGDAKKVIEDMVKAVE" misc_feature 225603..227033 /gene="pntB" /locus_tag="PA0196" /note="NAD/NADP transhydrogenase beta subunit [Energy production and conversion]; Region: PntB; COG1282" /db_xref="CDD:440893" gene 227382..228194 /gene="tonB2" /locus_tag="PA0197" /db_xref="GeneID:879472" CDS 227382..228194 /gene="tonB2" /locus_tag="PA0197" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="transporter TonB" /protein_id="NP_248888.1" /db_xref="GeneID:879472" /translation="MATPQPVDARTQPWRETPGGDLVALGRPVRQALHLVRHNPAQGR VLSRRETILLVLFALTLHGAVIHWLSQQRTPALPEVPPQVPPMTIEFTAPAPPVVEPP PPEPLPPVVEEPPPPVVDENAVKPPPPKPVPKPKPKPKPQPRPKPAPKAVEPAPPAPP QPAAPPAPPAPAAAPAPLTPPSANAGYLHNPAPEYPALAMRRGWEGTVLLRVHVLASG SPSEIQVQKSSGREALDQAAVKAVKRWSFVPAKRGDKAEDGWVSVPIDFKLN" misc_feature 227952..228188 /gene="tonB2" /locus_tag="PA0197" /note="Gram-negative bacterial TonB protein C-terminal; Region: TonB_C; pfam03544" /db_xref="CDD:427361" gene 228223..228942 /gene="exbB1" /locus_tag="PA0198" /db_xref="GeneID:883080" CDS 228223..228942 /gene="exbB1" /locus_tag="PA0198" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transporter ExbB" /protein_id="NP_248889.1" /db_xref="GeneID:883080" /translation="MSLLTTPLESVEGAVIWLLVGFSVVTWGLALVKGVQFARQKRQD RQFQKQFWSATSLDSAGEQAQDKQGAGARVAQAGFAAIQVQDNGQPDLAQSINHQDRL ERALRQQIQRERRSLESGLAVLASIGSTSPFIGLFGTVWGIMEALKGISAAGSASLET VAGPIGSALIATGVGIAVAVPAVLVYNYFLRRLKLTAADLDDFAHDFYSLAQKSAFRV IVHPSAARQAGNPSRNVKEAS" misc_feature 228259..228852 /gene="exbB1" /locus_tag="PA0198" /note="Biopolymer transport protein ExbB/TolQ [Intracellular trafficking, secretion, and vesicular transport]; Region: TolQ; COG0811" /db_xref="CDD:440573" gene 228944..229345 /gene="exbD1" /locus_tag="PA0199" /db_xref="GeneID:879490" CDS 228944..229345 /gene="exbD1" /locus_tag="PA0199" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="biopolymer transport protein ExbD" /protein_id="NP_248890.1" /db_xref="GeneID:879490" /translation="MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPI NLPKTESVAPPEQKDPLVVSIDGAGKLFVNKDEIQPELLESNLAAAKAKDAEVRVQLQ ADEGVNYGQVAKAMASIERAGITRLAVITAR" misc_feature 228944..229342 /gene="exbD1" /locus_tag="PA0199" /note="Biopolymer transport protein ExbD [Intracellular trafficking, secretion, and vesicular transport]; Region: ExbD; COG0848" /db_xref="CDD:440609" gene complement(229526..229738) /locus_tag="PA0200" /db_xref="GeneID:879623" CDS complement(229526..229738) /locus_tag="PA0200" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248891.1" /db_xref="GeneID:879623" /translation="MAKKFPLHPSHPERICWGCDRYCSAESMGCGNGASRTQHPSELF GEDWAGEWEVEGTEDAKEQEAPARQA" misc_feature complement(229592..229732) /locus_tag="PA0200" /note="Protein of unknown function (DUF3079); Region: DUF3079; pfam11278" /db_xref="CDD:431777" gene 229954..230535 /locus_tag="PA0201" /db_xref="GeneID:879531" CDS 229954..230535 /locus_tag="PA0201" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248892.1" /db_xref="GeneID:879531" /translation="MHSERVRYVLVPGWYGSEDAHWQSHWQRALPNASRVEQQDWITP LRADWIAELDAEIRRQPGPVVLIAHSLGCVTVALWAAQAERRVRDQVRGALLVAPADV ERESCAEALRNFAPISREPLPFPSVLVGSDNDQACSPQRAMHLARAWGAETVILPEAG HINVKSGHGAWEAGYRHLFRLQYLIDSQARRRA" misc_feature 229975..230493 /locus_tag="PA0201" /note="Serine hydrolase; Region: Ser_hydrolase; pfam06821" /db_xref="CDD:399658" gene complement(230543..232000) /locus_tag="PA0202" /db_xref="GeneID:879445" CDS complement(230543..232000) /locus_tag="PA0202" /EC_number="3.5.1.4" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amidase" /protein_id="NP_248893.1" /db_xref="GeneID:879445" /translation="MKPNPPINELVLLQAHQLAERIRLRQVSCREVMQAYLAHIERFN PRVNALVSLLPAERLLEEADARDGELARGEWRGWMHGLPHAIKDLSLTRGIRTTLGSP LYRDYIPERDGIMVERIRAAGAILIGKTNTPEFGLGSQTYNPLFGATACAYDERLSAG GSSGGAAAALALHLVPVADGSDMMGSLRNPAAFNNVIGFRPSQGRVPFDDSADLFFDQ LGYEGPMGRSVRDTALLLSVQAGADRRAPLSIAEPGARFAAPLERDFEGTRLGWLGDL DGYLPMQDGILQMCQRALGDFRSLGCEIEEANLGFAPERLWECWRTLRHWLVAGSLGG VHADPAKRALLKPEALWEVENGLRLGADAVFRASVIRSDWYRAIGRLFERYDYLLLPS AQVFPFAKETPWPRSIEGVAMDTYHRWMEVVVPGSLSGCPVANVQAGFNAEGLPMGLQ IIGPHQADFAVLQLAHAYERASRWFERQPSPLLAN" misc_feature complement(230546..231997) /locus_tag="PA0202" /note="amidase; Provisional; Region: PRK07486" /db_xref="CDD:236028" gene complement(232066..233100) /locus_tag="PA0203" /db_xref="GeneID:883108" CDS complement(232066..233100) /locus_tag="PA0203" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_248894.1" /db_xref="GeneID:883108" /translation="MHQRIASIGLGLTLALGGSAQAAGQLNVVSWSGYFSPQLLEKFE KESGIRVTVDSYDSNETLLAKLKQGGAGYDVAIPSQQFVPILVKEALLERFDPAAEPY YANLLDNLKKPAWDPEGAYSVPFIWGTTSVVLDGARYAGPADSYAVLYQPPEELRGRI NMFDSVSEVVDMASLYLGIPLCSADPKQMQRVLELLKAQKPFVKTYSSKAGSIRENLA AGEVDMSMFWGGSSMRARELKPSLKYLYPKEGVLAWVDNLVIPRGSRNPDNARRFIAF LAQPENAALTQNFLKHQSPVKGVEPYLDASLKDAPELHVPAGTRVVFSQTCGEDAIRL ADRLWTNLMR" misc_feature complement(232084..233028) /locus_tag="PA0203" /note="TThe periplasmic substrate-binding component of an uncharacterized active transport system closely related to spermidine and putrescine transporters; contains the type 2 periplasmic binding fold; Region: PBP2_PotD_PotF_like_3; cd13664" /db_xref="CDD:270382" misc_feature complement(order(232225..232227,232333..232335, 232339..232341,232408..232410,232417..232419, 233008..233010)) /locus_tag="PA0203" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270382" gene complement(233123..233932) /locus_tag="PA0204" /db_xref="GeneID:878513" CDS complement(233123..233932) /locus_tag="PA0204" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_248895.1" /db_xref="GeneID:878513" /translation="MIARLWKGSRHNVQDFPGFGAFSLLFYLYLYAPILVLVVYSFNA NQSATVWTGFSLDWYRAAFANQALRQAAGNSLLIAVCASAAATAIATLAALGTSRGAK FRGLRLSMGAIMLPLVLPEIVVGVATLALFSTVGLSLGYGNLIIAHTVFCIPFAYLPI RARLDDMDLSLEQAAADLYAGPWRTLRKVTLPLLAPGIFSGLMLAFIVSLDNFVISMM VSQAGTTTLPIFIFGLLRMGVTPDVNAVSTLILGVSVIFVSLSYLLGKPRA" misc_feature complement(233126..233887) /locus_tag="PA0204" /note="ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]; Region: PotC; COG1177" /db_xref="CDD:440790" gene complement(233929..234849) /locus_tag="PA0205" /db_xref="GeneID:879480" CDS complement(233929..234849) /locus_tag="PA0205" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_248896.1" /db_xref="GeneID:879480" /translation="MHPIPSPGAALQRRQALRSFLGVTPALVAIGLFLVLPILIVAAY SLMEANPYGGVDRAFSGEAYVSLLFERQMDDSLAFADSYLTIALRSLGIAALTTLITL SLGFPVAVWLAMQPPRRRGLLIFLITVPFWANLLIRTYAWILLLRGSGVINNGLLGLG LVDHPLPLLYSDGAVLLGLVYTYAPFVVLPIYATLEKMDMRLLEAAQDLYAGRLRTLR KVVLPTARPGILAGAILTFVPCLGAMIAPELLGGGTRMMLGNLIFRQFADARNWPFGA ALSLVLMAAVMLILTVYAWRAERLARGMGR" misc_feature complement(233935..234813) /locus_tag="PA0205" /note="ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]; Region: PotB; COG1176" /db_xref="CDD:440789" gene complement(234875..235987) /locus_tag="PA0206" /db_xref="GeneID:879760" CDS complement(234875..235987) /locus_tag="PA0206" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter ATP-binding protein" /protein_id="NP_248897.1" /db_xref="GeneID:879760" /translation="MSALHSLRTHAVSIRAVRKVYGDPESGPVALKRVDLDIRDNEFF TLLGPSGCGKTTLLRMIAGFEFPTEGEILLYGENIAARPPFERPVNTVFQHYALFPHM SIAENLAFGLESRPLGRSLGKAEIAERVREMLALVQMERFADRRPGQLSGGQQQRVAL ARALAPQPRVLLLDEPLSALDLKLRQAMREELKAIQAKTGITFIFVTHDQEEALTMSD RIAVLSEGQVQQVGPPEEIYERPGNRFVADFIGETNFIEAELLQRDGPLALYRGPGGE AFEAAARDGLAAGARVCLSIRPERLDLLAANTGGGLPCTVESQVYLGTDLQYRVRLAD GSLLTVRTPNGTARRFATGEAACLAVAKDSASVLLD" misc_feature complement(234884..235966) /locus_tag="PA0206" /note="ABC-type Fe3+/spermidine/putrescine transport systems, ATPase component [Amino acid transport and metabolism]; Region: PotA; COG3842" /db_xref="CDD:443052" gene 236218..237111 /locus_tag="PA0207" /db_xref="GeneID:879460" CDS 236218..237111 /locus_tag="PA0207" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248898.1" /db_xref="GeneID:879460" /translation="MSIPRLPPLNAVRAFEAAARLGSYVAAAKALHVTQPAVGRHVRL LEDWLGARLFERTSRGVLLTPAGRQYYAAVSTALQQIAEAGGQLSGARWLRIMAVPAF SRRWLTSRLETLCAQRPGLKIALEPNPTFDHVEERSADLGIVYGLPGQYANPRALLIR PKVFPVCSPAYLAAAGPLESAEQLVAHKLIHVDDGEWWNLWFSAIGVDVEVRPAVLYL SNDHALARAEEGLGIALANEVLVRQELRSGALVRPLAAEAALECYQVLTPPGTPSADV EWFIGWLGEALREEFPDAVTS" misc_feature 236218..237087 /locus_tag="PA0207" /note="DNA-binding transcriptional activator GcvA; Provisional; Region: PRK11139" /db_xref="CDD:182990" gene 237232..238896 /gene="mdcA" /locus_tag="PA0208" /db_xref="GeneID:879322" CDS 237232..238896 /gene="mdcA" /locus_tag="PA0208" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="malonate decarboxylase subunit alpha" /protein_id="NP_248899.1" /db_xref="GeneID:879322" /translation="MTTPISPPPQWSRRRQEKQRRLERVRGLADGAVLPREGLVAALE ALIAPGDRVVLEGNNQKQADFLSRSLARVDPGKLHDLHMIMPSVGRPEHLDLFELGIA RKLDFSFSGPQSLRIGQLLEDGLLEIGAIHTYIELYARLVVDLIPNVALVAGFVADRE GNVYTGPSTEDTPALVEPTAFSDGIVIVQVNRIVDDPRDLPRVDIPASWVDFVVEADQ PFYIEPLFTRDPRHIKPVHVLMAMMAIRGIYQRHNVQSLNHGIGFNTAAIELILPTYG ESLGLKGKICRHWTLNPHPTLIPAIESGWVESVHCFGTELGMEGYIAQRPDVFFTGRD GSLRSNRMFCQLAGQYAVDLFIGATLQVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGR RHSTPAWLDMRGEPEALLERGRKLVVQMVETFQDGGKPTFVERLDALEVARQTGMPLA PVMIYGDDVTHVLTEEGIAYLYKARSLEERQAMIAAVAGISPIGLRHDPRETQRMRRE GLIALPEDLGIRRTDASRELLAAKSIAELVEWSGGLYQPPARFRSW" misc_feature 237259..238893 /gene="mdcA" /locus_tag="PA0208" /note="Malonate decarboxylase, alpha subunit, transporter; Region: Mal_decarbox_Al; pfam16957" /db_xref="CDD:435674" protein_bind complement(237947..237959) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(237956..237968) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 238896..239777 /locus_tag="PA0209" /db_xref="GeneID:879248" CDS 238896..239777 /locus_tag="PA0209" /EC_number="2.4.2.52" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase" /protein_id="NP_248900.1" /db_xref="GeneID:879248" /translation="MNAIANLAATPGADLGECLADLAVDALIDEAELSPKPALVDRRG NGAHADLHLGLMQASALSLWPCFKEMADAAQRHGRIDARLRGVLGQLGRDGEAAMLRT TEGVNTHRGAIWALGLLVAAAALEPRRTQAGEVAARAGRIALLDDPAAAIGDSHGERV RRRYGVGGAREEARLCFPRAVRHGLPQLWRSREGGAGEQNARLDALLAIMSVLDDTCV LHRAGRVGLAAMQDGARAVLAAGGSASLAGRRRLCELDRRLLALNASPGGAADLLAAC LFLDRLPAVSGGWAGSL" misc_feature 238902..239762 /locus_tag="PA0209" /note="triphosphoribosyl-dephospho-CoA synthase; Validated; Region: PRK01237" /db_xref="CDD:234927" gene 239779..240078 /gene="mdcC" /locus_tag="PA0210" /db_xref="GeneID:883035" CDS 239779..240078 /gene="mdcC" /locus_tag="PA0210" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="malonate decarboxylase acyl carrier protein" /protein_id="NP_248901.1" /db_xref="GeneID:883035" /translation="METLTFEFPAGAPARGRALAGCVGSGDLEVLLEPAAGGALSIQV VTSVNGSGPRWQQLFARVFAASTAPAASIRIHDFGATPGVVRLRLEQALEEAGHD" misc_feature 239779..240075 /gene="mdcC" /locus_tag="PA0210" /note="malonate decarboxylase subunit delta; Provisional; Region: PRK01220" /db_xref="CDD:179253" gene 240071..240934 /gene="mdcD" /locus_tag="PA0211" /db_xref="GeneID:879489" CDS 240071..240934 /gene="mdcD" /locus_tag="PA0211" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="malonate decarboxylase subunit beta" /protein_id="NP_248902.1" /db_xref="GeneID:879489" /translation="MTDVARLLALRSFTELGARQRARALLDAGSFRELLDPFAGVQSP WLERQGIVPQADDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAE DNRNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQRYQPVVAVIAGPVGCF GGMSIAAGLCSYVLVTREARLGLNGPQVIEQEAGIAEYDSRDRPFIWSLTGGEQRFAS GLADAYLADDLDEVRTSVLAYFAKGLPARPRCRRAEDYLRRLGDLDTAEQPDAAGVRR LYQGLGQGDAT" misc_feature 240074..240910 /gene="mdcD" /locus_tag="PA0211" /note="malonate decarboxylase subunit beta; Reviewed; Region: PRK07189" /db_xref="CDD:235954" gene 240931..241737 /gene="mdcE" /locus_tag="PA0212" /db_xref="GeneID:879507" CDS 240931..241737 /gene="mdcE" /locus_tag="PA0212" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="malonate decarboxylase subunit gamma" /protein_id="NP_248903.1" /db_xref="GeneID:879507" /translation="MSQPFASRGLAWFQALAGSLAPRPGDPASLRVADAELDGYPVRF LAVVPDPDNPFPRARQGEVGLLEGWGLAAAVDEALEADREAPRKRALLAIVDVPSQAY GRREEALGIHQALAGAVDAYARARLAGHPLIGLLVGKAMSGAFLAHGYQANRLIALHD PGVMVHAMGKAAAARITLRSVEELEALAAKVPPMAYDIDSYASLGLLWRTLPVETVEV PSTADLVRVRTCLGEALADILGGPRDLGGRLGAANREASARVRRLLREQW" misc_feature 240961..241734 /gene="mdcE" /locus_tag="PA0212" /note="Malonate decarboxylase gamma subunit (MdcE); Region: MdcE; pfam06833" /db_xref="CDD:399666" gene 241753..242445 /locus_tag="PA0213" /db_xref="GeneID:879254" CDS 241753..242445 /locus_tag="PA0213" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="phosphoribosyl-dephospho-CoA transferase" /protein_id="NP_248904.1" /db_xref="GeneID:879254" /translation="MVIANSSQRGSSRRRLAPDPMRRRAGPEPHDLLLGMAPAHLPEN APAWVCAALKAGWPVVVRRAPADPARVAIGVRGLAREQRWAGWMPLAAITRRLRPEAL GQREPAMLRDLPAWRALRDLRAPLNALGLAWGVTGGAGFELASGVAVLHPDSDLDLLL RTPRPFPRDDALRLLQCFEQCPCRIDLQLQTPAGGVALREWAEGRPRVLAKGSEAPLL LEDPWRIAEVEA" misc_feature 241825..242436 /locus_tag="PA0213" /note="phosphoribosyl-dephospho-CoA transferase; Provisional; Region: PRK01293" /db_xref="CDD:234936" gene 242442..243374 /locus_tag="PA0214" /db_xref="GeneID:879334" CDS 242442..243374 /locus_tag="PA0214" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl transferase" /protein_id="NP_248905.1" /db_xref="GeneID:879334" /translation="MSVLFAYPGQGAQRPGMLAALPDEPPVRACLEQAADCLGQAPAE LESAEALRGTRAVQLCLLIAGVAASRLLETRGHRPGLVAGLSIGAYPAAVVAGALDFD DALRLVALRGELMQAAWPEGYGMSAILGLEQAQLEALILAVRREHPPLYLANVNAERQ LVVAGSEAALAALAERARAAGASAAKRLAVSVPSHCALLDEPAARLAEAFAGIRLHRP RVPYLSSSRARLVAEPAALADDLAGNMARRVEWLATLRSAYERGARLHLELPPGRVLS GLARPLFGCATPAFEGSRADTLDALLREEEKRTR" misc_feature 242448..243350 /locus_tag="PA0214" /note="malonate decarboxylase, epsilon subunit; Region: malonate_mdcH; TIGR03131" /db_xref="CDD:132175" gene 243431..243835 /locus_tag="PA0215" /db_xref="GeneID:883110" CDS 243431..243835 /locus_tag="PA0215" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="malonate transporter MadL" /protein_id="NP_248906.1" /db_xref="GeneID:883110" /translation="MIIYGVALLSLCTLAGLFIGEILGVLLGVPANVGGVGIAMLLLI FVGSYLGKRGLLSAKTEQGVEFWSAVYIPIVVAMAAQQNVLGALSGGPAAILAGIAAV AVAFALVPLLDRFGRKKAEGARPLKPRTSVQG" misc_feature 243431..243781 /locus_tag="PA0215" /note="Malonate transporter MadL subunit; Region: MadL; pfam03817" /db_xref="CDD:427523" gene 243841..244605 /locus_tag="PA0216" /db_xref="GeneID:879529" CDS 243841..244605 /locus_tag="PA0216" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="malonate transporter MadM" /protein_id="NP_248907.1" /db_xref="GeneID:879529" /translation="MFESLNKVINGYGLISGFAIIGVTMAVSYWLSARLTRGRLHGSA IAIFLGLVLSYVGGVATGGQKGLVDVPLMSGIGLLGGAMLRDFAIVATAFGVNVEELR RAGVSGVVSLFLGVGSSFVAGVAVAMAFGYTDAVSLTTIGAGAVTYIVGPVTGAALGA SSEVMALSIAAGLVKAILVMVLTPFVAPYIGLNNPRTAVIFGGLMGTSSGVAGGLAAT DPKLVPYGCLTAAFYTAIGCLLGPSLLYFSVRGLVG" misc_feature 243853..244599 /locus_tag="PA0216" /note="Malonate/sodium symporter MadM subunit; Region: MadM; pfam03818" /db_xref="CDD:427524" gene complement(244690..245619) /locus_tag="PA0217" /db_xref="GeneID:883005" CDS complement(244690..245619) /locus_tag="PA0217" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248908.1" /db_xref="GeneID:883005" /translation="MLIDEEITLKKLETFLAFMRTGNLARAAAELGTSNVSVHRAIHS LESALRCPLFKHEGRNLTPLESAYVLEERAQKLVQEVLDTVRLTREAAGFSAERFKLG ALYSLTVKTVPQLIMGLKLRRSALNIDLILGSNVDLFYQLKNMELDAILVSLNDSVSD PDCEHLPLFSDDIFLAVPVDSPYARLAEIDLSTLRDTPFVTLTQGFATHQDGTRVFQQ AGFEPQIAMQVNDIFTLLSMVSSGVGHALLPKRIEAVYENRVRLIPLQPRYRLQQHIG VVFLKAKERDPNLLALLAECRMYSLRLEQEAAG" misc_feature complement(245431..245595) /locus_tag="PA0217" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(244732..245328) /locus_tag="PA0217" /note="The C-terminal substrate-binding domian of LysR-type transcriptional regulator MdcR, which involved in the malonate catabolism contains the type 2 periplasmic binding fold; Region: PBP2_MdcR; cd08416" /db_xref="CDD:176108" misc_feature complement(order(244897..244902,244906..244911, 244927..244944,245224..245244,245248..245250, 245260..245262,245269..245274,245278..245283)) /locus_tag="PA0217" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176108" gene complement(245948..246868) /locus_tag="PA0218" /db_xref="GeneID:877906" CDS complement(245948..246868) /locus_tag="PA0218" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248909.1" /db_xref="GeneID:877906" /translation="MASYTLRQLKYFVTTVECGSVAEASRKLYIAQPSISTAVKGLEE SFGVQLFIRHHAQGVSLTPAGARFYRKAQELLRMAHEFEQNALADNDVIAGQIDIGCF ETVAPLYLPGLIAGFRQAYPGVEIRIRDGEQQELVQGLTSGRFDLAFLYEHDLDSTIE TEPLMPPQRPHALLPEGHRFAGQAQVSLRDLCLEPMILLDVQPSRTYFVSLFEELGLT PNIAFSSPSIEMVRGMVGQGFGFSLLVTRPHSECTYDGKKVVMVDLAEPVSTSGLAAA WLKRAQLTKPARLFVDYCREQLGKLAERRH" misc_feature complement(<246374..246853) /locus_tag="PA0218" /note="nitrogen assimilation transcriptional regulator; Provisional; Region: PRK11233" /db_xref="CDD:183045" misc_feature complement(245987..246583) /locus_tag="PA0218" /note="The C-terminal substrate-binding domain of putative LysR-type transcriptional regulator PAO1-like, a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_PAO1_like; cd08412" /db_xref="CDD:176104" misc_feature complement(order(246134..246136,246185..246187, 246257..246259,246359..246361,246416..246418, 246545..246547,246557..246559)) /locus_tag="PA0218" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176104" misc_feature complement(order(246101..246106,246125..246127, 246155..246160,246167..246172,246182..246190, 246194..246202,246218..246223,246446..246448, 246455..246457,246479..246481,246485..246487, 246524..246529,246533..246538,246545..246553)) /locus_tag="PA0218" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176104" gene 247219..248709 /locus_tag="PA0219" /db_xref="GeneID:879237" CDS 247219..248709 /locus_tag="PA0219" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase" /protein_id="NP_248910.1" /db_xref="GeneID:879237" /translation="MFELSDWQRRAATQRFIDQALIGGRQRPAASGATFDAIDPASNR LLARVAACDAADVDAAVAAARRAFDEGPWARLAPVERKRVLLRLAELMLAHREELALL DSLNMGKPVMDAWNIDVPGAAHVFAWYAESLDKLYDQVAPTAQQTLATITRVPLGVIG AVVPWNFPLDMAAWKLAPALAAGNSVVLKPAEQSPFSALRLAELALEAGVPEGVLNVV PGLGEQAGKALGLHPEVDALVFTGSTEVGKYFMQYSAQSNLKQVWLECGGKSPNLVFA DCRDLDLAAEKAAFGIFFNQGEVCSANSRLLVERSIHDEFVERLLAKARDWQPGDPLD PASRAGAIVDRRQTAGILAAIERAQGEGATLLGGGRQLTINGSDNFIEPTLFGDVRPD MQLAREEIFGPVLAISAFDSEDEAIRLANDSRYGLAASLWSDDLHRAHRVARRLNAGT VSVNTVDALDVAVPFGGGKQSGFGRDLSLHSFDKYTQLKTTWFQLR" misc_feature 247312..248694 /locus_tag="PA0219" /note="Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like; Region: ALDH_GABALDH-PuuC; cd07112" /db_xref="CDD:143430" misc_feature order(247702..247716,247738..247740,247783..247785, 247789..247794,247936..247947,247954..247956, 247963..247968,248011..248019,248116..248118, 248413..248415,248419..248421,248497..248499, 248611..248613) /locus_tag="PA0219" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:143430" misc_feature order(247714..247716,248011..248013,248107..248109, 248116..248118) /locus_tag="PA0219" /note="catalytic residues [active]" /db_xref="CDD:143430" gene 248767..250200 /locus_tag="PA0220" /db_xref="GeneID:879442" /db_xref="PseudoCap:PA0220" CDS 248767..250200 /locus_tag="PA0220" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="amino acid APC family transporter" /protein_id="NP_248911.1" /db_xref="GeneID:879442" /db_xref="PseudoCap:PA0220" /translation="MNDTPNVREPALRRVLGLGPLLAVAIGLVVSQGVMVLMLQGAGT AGLGFIVPLGVAYLLALSYAFSFSELALMIPRAGSLSSYTEVAIGHFPAILATFSGYV VVAMFALSAELLLLDLIIGKVYPGALPPMLVAYGVLGLFTLLNLLGIDIFARLQSALA LLMMIVLLVLGLGAVSSDHASAQTALASGWNPLGVSALALTAMAVWGFVGAEFVCPLV EETRRPERNIPRSMILGLSIIFLTIALYCFGALLCIPQAELAGDPLPHFLFANRVFGE YGQLFLVIAAITATCSTLNSSLAAIPRMLYGMAQNGQAFPQFKQLSRRARTPWVAVLF VAAITGLPILILGQDPDSINLLLLAAALAWLLAYIIAHVDVLALRRRYPHIARPFRTP FYPLPQLFGIAGMIYAVVHVSPTPEMTGRIFASAGVVLGVVSLVAVVWIKGVMRKPLF VPEPLETAGETAQGKSVALDPLQSPSA" misc_feature 248791..250011 /locus_tag="PA0220" /note="Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; Region: PotE; COG0531" /db_xref="CDD:440297" gene 250231..251613 /locus_tag="PA0221" /db_xref="GeneID:879365" CDS 250231..251613 /locus_tag="PA0221" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_248912.1" /db_xref="GeneID:879365" /translation="MTAQLNPQRDTRDYQQLDAAHHIHAFLDQKALNREGPRVMVRGD GLQLWDNDGKRYLDGMSGLWCTNLGYGRQDLAAAASRQLEQLPYYNMFFHTTHPAVVE LSEMLFSLLPDHYSHAIYTNSGSEANEVLIRTVRRYWQILGKPQKKIMIGRWNGYHGS TLGSTALGGMKFMHEMGGMLPDFAHIDEPYWYANGGELSPAEFGRRAALQLEEKILEL GAENVAAFVAEPFQGAGGMIFPPQSYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFA HEHFGFQPDTLSIAKGLTSGYIPMGGLVLGKRIAEVLVEQGGVFAHGLTYSGHPVAAA VAIANLKALRDEGVVTRVREETGPYLQRCLREVFGDHPLVGEVQGAGFVAALQFAEDK VTRKRFANENDLAWRCRTIGFEEGVIIRSTLGRMIMAPALVAGRAEIDELIDKTRIAV DRTAREIGVL" misc_feature 250231..251610 /locus_tag="PA0221" /note="aspartate aminotransferase family protein; Region: PRK12403" /db_xref="CDD:171472" misc_feature order(250597..250605,250699..250704,250708..250710, 250915..250917,251014..251016,251020..251025, 251101..251103) /locus_tag="PA0221" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99735" misc_feature order(250600..250605,250699..250704,250915..250917, 251014..251016,251023..251025,251101..251103) /locus_tag="PA0221" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature 251101..251103 /locus_tag="PA0221" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 251777..252835 /locus_tag="PA0222" /db_xref="GeneID:877806" CDS 251777..252835 /locus_tag="PA0222" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248913.1" /db_xref="GeneID:877806" /translation="MFKSLHQYAHVFSRLSLFGLAFAAAAQAQSQSLTVISFGGATKA AQEQAYFKPFERSGGGQVVAGEYNGEMAKVKAMVDVGKVSWDVVEVESPELLRGCDEG LFERLDPARFGDPAQFVPGTFSECGVATYVWSMVMAYDSTKLARAPQSWADFWNVREF PGKRGLRKGAKYTLEVALLADGVKAEDLYKVLATPEGVSRAFAKLDQLKPNIQWWEAG AQPPQWLAAGDVVMSAAYNGRIAAAQKEGVKLAIVWPGSLYDPEYWAVVKGTPNKALA EKFIAFASQPQTQKVFSEQIPYGPVHKGTLALLPKTVQEALPTAPANLEGARAVDAEF WVDHGEELEQRFNAWAAR" misc_feature 251873..252676 /locus_tag="PA0222" /note="The periplasmic-binding component of an uncharacterized ABC transport system from Rhodopseudomonas palustris CGA009 and related proteins; contains the type 2 periplasmic-binding fold; Region: PBP2_polyamine_RpCGA009; cd13589" /db_xref="CDD:270307" misc_feature order(251891..251893,252281..252283,252482..252484, 252554..252556,252560..252562) /locus_tag="PA0222" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270307" gene complement(252913..253794) /locus_tag="PA0223" /db_xref="GeneID:878110" CDS complement(252913..253794) /locus_tag="PA0223" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate synthetase" /protein_id="NP_248914.1" /db_xref="GeneID:878110" /translation="MSASIHGIIGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAP LGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEA VMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDN VTMVKESTGDIQRMHKLRLLGEGRVPFYNGCNPLALEAFVAGAKGWCSAAPNLIPTLN GQLYQAVLDGDLEKARALFYRQLPLLDFILRRGLPTTIKAGLGLSGLEVGAPRLPVQA LDTEGCRYLQGLLEELR" misc_feature complement(252919..253782) /locus_tag="PA0223" /note="4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism, Cell wall/membrane/envelope biogenesis]; Region: DapA; COG0329" /db_xref="CDD:440098" gene complement(253854..254636) /locus_tag="PA0224" /db_xref="GeneID:878177" CDS complement(253854..254636) /locus_tag="PA0224" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="class II aldolase/adducin domain-containing protein" /protein_id="NP_248915.1" /db_xref="GeneID:878177" /translation="MATTLELPKDQLIQHALKQMKSSLGDNTWTDRQKLALTCRILFE AGHDSGLAGQITSRGPEAGTYYTQQLGLGFDEISAGNLLLVDEDLNVLHGHGMANPAN RFHSWVYRARPDVNCIIHTHPLHIAALSTLEVPLQVSHMDLCPLYDDCAFLKDWPGVP VGNEEGEIISAALGDKRAILLSHHGLLATGASIEEACVIAVLLERAAKMQLLAMAAGE IKPIPPALAREAHDWISTPKRHGAAFNYYARRCLPRNSDCLS" misc_feature complement(253857..254636) /locus_tag="PA0224" /note="class II aldolase/adducin domain protein; Provisional; Region: PRK07090" /db_xref="CDD:180832" misc_feature complement(order(254001..254003,254022..254024, 254034..254036,254055..254057,254088..254090, 254169..254171,254214..254216,254220..254222, 254241..254249,254262..254267,254271..254273, 254409..254414,254418..254420,254490..254492, 254514..254516,254526..254528)) /locus_tag="PA0224" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:238232" misc_feature complement(order(254085..254087,254271..254273, 254277..254279,254331..254336,254424..254429, 254475..254477)) /locus_tag="PA0224" /note="active site" /db_xref="CDD:238232" misc_feature complement(order(254085..254087,254271..254273, 254277..254279)) /locus_tag="PA0224" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:238232" gene 254791..255330 /locus_tag="PA0225" /db_xref="GeneID:880191" CDS 254791..255330 /locus_tag="PA0225" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248916.1" /db_xref="GeneID:880191" /translation="MSMRLKLLRKKLGVTLETLAEKTGLTKSYLSKVERGLNTPSIAA ALKLAKALNVQVEELFSEESDGVDGYSIVRRDQRKSLSSGDDGPAYASLAQQIGARAL LPFIVHPPRDFSHSTFKEHLGEEFIFVHEGQVEVDFMNQRIILERGDALHFNAQKPHR IRSLGETQAELLVVIHSDE" misc_feature 254791..254994 /locus_tag="PA0225" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" misc_feature 255058..255318 /locus_tag="PA0225" /note="XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain; Region: cupin_XRE_C; cd02209" /db_xref="CDD:380339" misc_feature order(255058..255060,255103..255105,255109..255111, 255142..255144,255151..255153,255163..255165, 255265..255267,255271..255273,255307..255309) /locus_tag="PA0225" /note="putative active site [active]" /db_xref="CDD:380339" gene 255481..256332 /locus_tag="PA0226" /db_xref="GeneID:878086" CDS 255481..256332 /locus_tag="PA0226" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="CoA transferase subunit A" /protein_id="NP_248917.1" /db_xref="GeneID:878086" /translation="MAEILSLREAVRRFVHDGDSVALEGFTHLIPTAAGHELIRQGRK DLTLIRMTPDLVYDLLIGAGCAKKLVFSWGGNPGVGSLHRLRDAVEKGWPQPLEIEEH SHADLANAYVAGASGLPFAVLRAYAGSDLPKVNPLIRSVTCPFTGEVLAAVPSVRPDV SVIHAQKADRKGNVLLWGILGVQKEAALAAKRCIVTVEEIVDELDAPMNACVLPSWAL SAVCLVPGGAHPSYAHGYYERDNRFYQDWDPIARDRESFTAWIDEYIRGTEDFGAFQA KLAEGKR" misc_feature 255490..256167 /locus_tag="PA0226" /note="Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid transport and metabolism]; Region: AtoD; COG1788" /db_xref="CDD:441394" gene 256329..257111 /locus_tag="PA0227" /db_xref="GeneID:877818" CDS 256329..257111 /locus_tag="PA0227" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="CoA transferase subunit B" /protein_id="NP_248918.1" /db_xref="GeneID:877818" /translation="MSSYSTNEMMTVAAARRLHNGAVCFVGIGLPSKAANLARLTSSP DVVLIYESGPIGAKPSVLPLSIGDGELAETADTVVPTGEIFRYWLQGGRIDVGFLGAA QVDRFGNINTTVIGDYRQPKVRLPGAGGAPEIAGSAKEVLIILKQSHRTFVDKLAFVT SVGHGEGGDSRQRLGLPGKGPVAIITDLCIMEPEAGSNEFVVTSLHPGVTREQVVEAT GWAIRFAERVAETPAPSEVELAALRDLEARTAAAHGQKGSDE" misc_feature 256335..257063 /locus_tag="PA0227" /note="Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit [Lipid transport and metabolism]; Region: AtoA; COG2057" /db_xref="CDD:441660" gene 257108..258313 /gene="pcaF" /locus_tag="PA0228" /db_xref="GeneID:877715" CDS 257108..258313 /gene="pcaF" /locus_tag="PA0228" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="beta-ketoadipyl CoA thiolase" /protein_id="NP_248919.1" /db_xref="GeneID:877715" /translation="MSREVFICDAVRTPIGRFGGSLSAVRADDLAAVPLKALVERNPG VDWSALDEVFLGCANQAGEDNRNVARMALLLAGLPESVPGVTLNRLCASGMDAIGTAF RAIACGEMELAIAGGVESMSRAPYVMGKADSAFGRGQKIEDTTIGWRFVNPLMKEQYG IDPMPQTADNVADDYRVSRADQDAFALRSQQRAGRAQEAGFFAEEIVPVTIRGRKGDT LVEHDEHPRPDTTLEALARLKPVNGPEKTVTAGNASGVNDGAAALVLASAEAVEKHGL TPRARVLGMASAGVAPRIMGIGPVPAVRKLLRRLDLAIDAFDVIELNEAFASQGLACL RELGVADDSEKVNPNGGAIALGHPLGMSGARLVLTALHQLEKSGGRRGLATMCVGVGQ GLALAIERV" misc_feature 257114..258310 /gene="pcaF" /locus_tag="PA0228" /note="beta-ketoadipyl CoA thiolase; Validated; Region: PRK09050" /db_xref="CDD:181624" gene 258463..259761 /gene="pcaT" /locus_tag="PA0229" /db_xref="GeneID:878155" CDS 258463..259761 /gene="pcaT" /locus_tag="PA0229" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="dicarboxylic acid transporter PcaT" /protein_id="NP_248920.1" /db_xref="GeneID:878155" /translation="MTAPVHQYSNEERRKRIFAIVGASSGNLVEWFDFYVYAFCAIYF APAFFPSDNPTVQLLNTAGVFAAGFLMRPIGGWMFGRIADKHGRKTAMLISVVMMCAG SLAIACMPTYASIGTLAPALLLLARMFQGLSVGGEYGTSATYMSEVALKGQRGFFASF QYVTLIGGQLLAVLVVVILQQLLSEDELRAWGWRIPFVIGAITAVIALWLRRSLNETA SKSTLERKESGTFAELFKHKRAFFTVLGFTAGGSLIFYTFTTYMQKYLVNTAGMSAKT ASAVMTFALLAYMLMQPLFGMLSDRIGRKTSMLWFGTLGTLCTLPILLALKTVSSPYM AFFLIILALAIVSLYTSISGLIKAEMFPPEVRALGVGVSYAVGNAIFGGSAEYVALGL KSVGMENVFYWYVSAMCLLALLVCVSLPDLRKVSYLNDEP" misc_feature 258487..259719 /gene="pcaT" /locus_tag="PA0229" /note="alpha-ketoglutarate transporter; Provisional; Region: PRK10406" /db_xref="CDD:182433" gene 259784..261163 /gene="pcaB" /locus_tag="PA0230" /db_xref="GeneID:881957" CDS 259784..261163 /gene="pcaB" /locus_tag="PA0230" /EC_number="5.5.1.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-carboxy-cis,cis-muconate cycloisomerase" /protein_id="NP_248921.1" /db_xref="GeneID:881957" /translation="MSDVPANQLFDAYFMAAPMRAVFSDRGRLQGMLDFEAALARAEA RTGVVPATAVAPIEAACRAELYDPLALAEAVATAGNSAIPLVKALGRQVAAGDAEAER YVHLGATSQDAMDSGLVLQLRRALALLEQDLQRLAEVLADQAERHADTPLAGRTWLQH ATPVTLGMKLAGLLGALTRHRQRLRELRPRLLVLQFGGASGTLAALGEQALPVAAALA EELGLALPEQPWHTQRDRLVEFASVLGLVAGSLGKFGRDVSLLMQTEAGEVFEPAGAG RGGSSTMPHKRNPVSSAVLIAAATRAPGLVSTLFAAMPQEHERSLGLWHAEWETLPEL CCLVAGALQQAIGLLEGLEVDAQRMRRNLGLTHGLVLAEAVSIALARRIGREAAHHLV EQCCRRAVEQRRELRAVLGEEARVSAELSGDELDRLLDPAHYLGQARAWVERALAEHH ALGFEPHPA" misc_feature 259796..261139 /gene="pcaB" /locus_tag="PA0230" /note="3-carboxy-cis,cis-muconate cycloisomerase; Provisional; Region: PRK09053" /db_xref="CDD:181627" gene 261179..261970 /gene="pcaD" /locus_tag="PA0231" /db_xref="GeneID:882150" CDS 261179..261970 /gene="pcaD" /locus_tag="PA0231" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-oxoadipate enol-lactonase" /protein_id="NP_248922.1" /db_xref="GeneID:882150" /translation="MPTVRLADGDLNYSLEGPAGAPVLLLSNSLGTDLGMWDTQIPAL TAHFRVLRYDTRGHGASLVTPGPYAIGQLGADVLALLDALELPRVHFCGLSMGGLIGQ WLGIHAGERLGRLVLCNTAAKIASDEVWNTRIDTVLKGGEQAMRDLRDASVARWFTAG FAEREPAQVERIVAMLAATSPQGYAANCAAVRDADFREQLGLVQAPTLIVAGSHDAVT TPDNARFMQARIADAQLVEFAAAHLSNVEAGDAFSRRLVDFLLSA" misc_feature 261209..261958 /gene="pcaD" /locus_tag="PA0231" /note="3-oxoadipate enol-lactonase; Region: protocat_pcaD; TIGR02427" /db_xref="CDD:131480" gene 261981..262382 /gene="pcaC" /locus_tag="PA0232" /db_xref="GeneID:882116" CDS 261981..262382 /gene="pcaC" /locus_tag="PA0232" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="4-carboxymuconolactone decarboxylase" /protein_id="NP_248923.1" /db_xref="GeneID:882116" /translation="MDEKQRYEAGMQVRRAVLGAAHVERSLANLTPFNEEFQEMITRH AWGDIWTRPGLPRHTRSLVTIAMLIGMNRNEELKLHLRAAKNNGVSRDEIKEVIMQSA IYCGIPAANATFHLAESVWDELGVESQQASR" misc_feature 261987..262355 /gene="pcaC" /locus_tag="PA0232" /note="4-carboxymuconolactone decarboxylase; Region: decarb_PcaC; TIGR02425" /db_xref="CDD:131478" gene 262557..263498 /locus_tag="PA0233" /db_xref="GeneID:877707" CDS 262557..263498 /locus_tag="PA0233" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248924.1" /db_xref="GeneID:877707" /translation="MSRKLHIHAPAIHYFDMVRRCHSIREAARRLNVASSAVNRQILK LEDEIGAPLFDRLPGGLRLTGAGEIFARHVTVVLQDMERVRSELDALQGLRTGHVEIA TIEAVTSDLLPCVLKAMRERYPDITVGVTLLGSQAIPEAVSSGAVDLGLAFALPRSAD LQQVSVGHFRLGAIVSPQHPLARHQAIAFADCVEHGLIMAKSELSIHHLLAPLQRRLR EPRRAVLESSSLELSRQLARRGLGVAFQTRLGIEADIAQGELRFLPLKDNGGIHSDLG LYVRTGRYLPVAVDALARQIAEEVRLREREEARLNEA" misc_feature 262587..263444 /locus_tag="PA0233" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 263689..264522 /locus_tag="PA0234" /db_xref="GeneID:881909" CDS 263689..264522 /locus_tag="PA0234" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248925.1" /db_xref="GeneID:881909" /translation="MKKMMQGAAALIALVGAGESMALEWMSNSVGFRYGQQFTNPNNP DKFAKRIYSFTHADGYRYGSNFFNLDVFLSDNRDPRKGTDHGGSEVYAVYRHQLYASR VFDRPLGTGLVKDYAFTLGFDASRNNNLASAKKRALVFGPTLKFNGPGVLDLSLLYYR EKNHFGVPGARHPDHTFDTTYMLNLTWMRPFKVGNHAAKFQGFVNYVGDKGEDYNDKH TAAETLVRTALMVAALPGDKRQPNLWLGVGYEYWHNKFGVDGGTGSRTSTPTLNMEFT F" misc_feature 263689..264519 /locus_tag="PA0234" /note="Nucleoside-specific outer membrane channel protein Tsx [Cell wall/membrane/envelope biogenesis]; Region: Tsx; COG3248" /db_xref="CDD:442479" gene complement(264964..266310) /gene="pcaK" /locus_tag="PA0235" /db_xref="GeneID:881907" CDS complement(264964..266310) /gene="pcaK" /locus_tag="PA0235" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="4-hydroxybenzoate transporter PcaK" /protein_id="NP_248926.1" /db_xref="GeneID:881907" /translation="MNSPSLPAVERLDVQAFINAQPLSPYQWRIVLLCFLIVFLDGLD TAAMGFIAPALTQDWGIDRASLGPVMSAALIGMVFGALGSGPLADRYGRKLVLVAAVF LFGLFSLASAYSTNVEQLLALRFLTGLGLGAAMPNATTLLSEYTPERLKSLLVTSMFC GFNLGMACGGFVSAKLIPLFGWHSLLLLGGLLPLVLAVVLLFRLPESARYLVVRNRGS ERVRQVLAPIAPAQVALARSFHVPEQQTVQARNVFAVIFSGTYSAGTLLLWLTYFMGL VIVYLLTSWLPTLMRDSGASLEQAAFIGALFQFGGVLSAVAVGWAMDRFNPHKVIGLF YLLAGVFAWCVGQSLGQVTLLATLVLLAGMCINGAQSAMPSLAARFYPTQGRATGVSW MLGIGRFGAILGAWIGATLLGLGWNFEQVLTALVLPAALATAAVLLKGLVSHADAG" misc_feature complement(265075..266274) /gene="pcaK" /locus_tag="PA0235" /note="benzoate transport; Region: 2A0115; TIGR00895" /db_xref="CDD:273327" gene 266616..267395 /locus_tag="PA0236" /db_xref="GeneID:881730" CDS 266616..267395 /locus_tag="PA0236" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248927.1" /db_xref="GeneID:881730" /translation="MAGSLIERALGLLELLASDARGLPLQQLADRLDIPKSAAHRMLA ELIRLGYVRQDDDTSRYRLSTRLAALGFRFLASSGVVDLVQPVLDGLARETGELVRLG VIEGDRQTWIAKSQGATSGLRYDPDMGREAPLFYTASGHAWLASLSDKAALALVERQG VGAARDFGPNAPRSRSELLRYLKRAREHGYAWQIECSAPGMAAMAALVRHPEDGRALG VLSVAGPSARFGEARMHELAPLLLAAAQDLSHASQASELFR" misc_feature 266631..267323 /locus_tag="PA0236" /note="DNA-binding transcriptional regulator, IclR family [Transcription]; Region: IclR; COG1414" /db_xref="CDD:441024" gene 267638..268681 /locus_tag="PA0237" /db_xref="GeneID:881928" CDS 267638..268681 /locus_tag="PA0237" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_248928.1" /db_xref="GeneID:881928" /translation="MDAPLRIALIGAGNMGRQHYHRLQRIAGARLCAVADPQGQAFAA DTGVPWFGDHRRLLEEARPQAAIVANPNNLHVATALDCLAAGVPLLLEKPVGVQLDEV SELVAVARRSGVPLLVGHHRRHNPLVVRARQLIAEGALGRLLSVTALWQLKKPDSYFE VAWRREPGAGMLLTNLIHDLDLLRHLCGEVREVQALAGNAIRGLPNEDNIALLLRFAN GALGSLTGCDAAAAPWSWELAAGENPVYPRQAEQPCYLLAGTEGALSLPQLRRWRYAE ARQGWHDPLAASEEAVATGDPLQRQLEHFVRVARGEEAPLMDATDAARTLALVEAVRE AARSGRACAPASF" misc_feature 267647..268660 /locus_tag="PA0237" /note="Predicted dehydrogenase [General function prediction only]; Region: MviM; COG0673" /db_xref="CDD:440437" gene 268704..269519 /locus_tag="PA0238" /db_xref="GeneID:882048" CDS 268704..269519 /locus_tag="PA0238" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248929.1" /db_xref="GeneID:882048" /translation="MESRILSLAALTVLELSPPDMVEAAARAGYSHVGLRLVPATVEE HHYPLLADAGLRRRTLARLRDSGVRTLDVEILRLRPDTRVGEFAAVLEVGAEFGARYV LVAGNDDDERRSADNFAALCDLARPLGLDPHLEFMPWTGIRDLRQAARVVEAAARDNA GLLLDAFHFDRSASSLEDLRAIPPARLGYAQLCDVVGPRPTSMDEILRQAREERRFPG DGGLDLLALLRALPENLPLSLEVPALDLLARGVDGAERARLAIERTRALLARL" misc_feature 268719..269339 /locus_tag="PA0238" /note="Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism]; Region: YcjR; COG1082" /db_xref="CDD:440699" gene 269669..270547 /locus_tag="PA0239" /db_xref="GeneID:882051" CDS 269669..270547 /locus_tag="PA0239" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248930.1" /db_xref="GeneID:882051" /translation="MNASTSPLPASDQTLRGILLICAAVFLFASHDGLSKFLSGFYPI VMVVWARYLVHTLLMVAVFVPRNGLAVIRSRRPLMQLARALCLIGTSLFFTTGLRYLP LAEATAVNFLAPLLVTALSVPLLKEKVSLGQWLAVLTGFIGVLFIVRPGGALFTPAAL FPLGSALCFGLYQLLTRMLANSDSPTTSNFLAGIFNTLIMSLLVPFFWQTPSLLHGLM MIALGGCGMGGHLLLTQAFRHAPPATLAPFSYGQIIFAGLLGLLVFGHVPDAWALLGI LVICASGLVVAWRRGR" misc_feature 269708..270544 /locus_tag="PA0239" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene complement(270573..271838) /locus_tag="PA0240" /db_xref="GeneID:881911" CDS complement(270573..271838) /locus_tag="PA0240" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="porin" /protein_id="NP_248931.1" /db_xref="GeneID:881911" /translation="MSHPSHVRALCASLCLGAGLPVHAGHVHAGQGFLEDAKASLTAR NFHLHRNFVGDASQGKAEEWTQSFILDARSGFTQGSVGFGLDVLGLYSLKLDGGKGTA GTQLLPIHDDGRPADDFGRLAVAGKLRVSNSELKIGEWMPVLPILRSDDGRSLPQTFR GGQLSANEIAGLTLYAGQFRGNSPRNDASMQDMSLFGRPAATSDRFDFAGGEYRFNGE RSLLGLWNAELKDIYRQQYLQLQHSQPLGDWLLGANLGGFRGRDAGSARAGKLDNRTV SALFSARYGLHTLYLGLQKVSGDDGWMRVNGTSGGTLANDSYNASYDNPGERSWQLRY DFDFVGLGLPGLTFMTRYLHGDHVRLAGVTDDGSEWGRESELGYTLQSGAFKRLNVRW RNSSQRRDWGSNTRFDENRLIVSYPLSLL" misc_feature complement(270582..271745) /locus_tag="PA0240" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene complement(271904..273229) /locus_tag="PA0241" /db_xref="GeneID:881918" CDS complement(271904..273229) /locus_tag="PA0241" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_248932.1" /db_xref="GeneID:881918" /translation="MIHSSSSRLLAADAPRESRGGRIRNAFAVGRTRWGMLALVFFAT TLNYIDRAALGVMQPILAEKMSWTAMDYANINFWFQVGYAIGFILQGRFIDKVGVKRA FFLAVLLWSLATGAHGLATSAAGFMVCRFILGLTEAANYPACVKTTRLWFPAGERAVA TGIFNAGTNVGAMVTPALLPLILGVWGWQAAFLCMSALGLVWLVFWWRNYYNPEEHPR VKQSELEYIQQQEEPPATRVPFSQILRRRGTWAFALAYSITAPVFWFYLYWLPPFLNQ QYGLGISVTQMGIPLILIWLTADFGSVGGGILSSWLIGRGMPAIRARLLSMLLFACTI VGVVFAANASGLWIAVLAIALAVGAHQAWTANIWSLVMDYTPKHLMSTVFGFGGMCAA LGGMFMTQIVGGVLTATNNNYAVLFTMIPAMYFIALTWLYFMAPRRIEA" misc_feature complement(271928..273133) /locus_tag="PA0241" /note="Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; Region: MFS_ExuT_GudP_like; cd17319" /db_xref="CDD:340877" misc_feature complement(order(272045..272047,272054..272059, 272066..272071,272078..272080,272126..272128, 272138..272140,272150..272155,272324..272326, 272336..272338,272426..272428,272435..272443, 272450..272455,272462..272464,272714..272716, 272723..272728,272735..272737,272795..272797, 272804..272812,272816..272821,272969..272971, 273065..273067,273074..273079,273086..273091)) /locus_tag="PA0241" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340877" gene 273775..275679 /locus_tag="PA0242" /db_xref="GeneID:880907" CDS 273775..275679 /locus_tag="PA0242" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248933.1" /db_xref="GeneID:880907" /translation="MQRSIATVSLSGTLPEKLEAIAAAGFDGVEIFENDLLHYDGSPR DVRRLCADLGLEILLFQPFRDFEGCRRERLGRNLERAERKFDLMQELGTDLVLVCSNV AADALGEPALLADDLRQLAERAAVRGLRIGYEALAWGRQVNTWEQAWDLVRRADQANL GLILDSFHTLSLDGDPRGIADLPGEKIFFVQMADAPLLAMDVLEWSRHFRCFPGQGGF DLAGFLAPVVASGYRGPLSLEVFNDGFRAAPTRANAVDGLRSLLYLEEKTREHLQRQT PHVAVDELFAPPPASLCDGIEFLEFAVDETLGARLGQWLQRLGFARAGEHRSKNVSLL RQGDINLVLNAEPYSFAHGFFEAHGPSLCATALCVRDAGQALERARAYGGQPYRGLLG PNEREIPAVRALDGSLLYLVERHTEGRSIYDSDFVTNDADTSGLGLRRVDHVALALPA EGLDSWVLFYKSLFDFGADDEVVLPDPYGLVTSRAVRSPCGSVRLPLNISEDRNTAIA RSLSSYRGSGVHHIAFDCADIFAAVAQAKEAGVALLEIPLNYYDDLAARFDFDDEFLS ELAYYNVLYDRDAQGGELFHVFTEPFEERFFFEILQRRHGYAGYGAANVPVRLAAMAQ ARRGVRRVKL" misc_feature 273775..274560 /locus_tag="PA0242" /note="Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism]; Region: YcjR; COG1082" /db_xref="CDD:440699" misc_feature 274654..275655 /locus_tag="PA0242" /note="4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism, General function prediction only]; Region: HppD; COG3185" /db_xref="CDD:442418" gene 275772..276440 /locus_tag="PA0243" /db_xref="GeneID:881956" CDS 275772..276440 /locus_tag="PA0243" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248934.1" /db_xref="GeneID:881956" /translation="MSKPDPAVVEESAPRGKGRKNNPEKTRQDILRAAIDEFVAQGLS GARVDAIAERTHTSKRMIYYYFGSKEQLYQAVLEKLYSDIRGIEGTLRLGALPPAKAM EKLVEFSFDYHDRHVDFVRIISIENIHKGEHIASSELVQSVNSSIVQSIAEILRRGEA EGVFRAGLEALDVHMLISSFCFYRVSNRYTVSRIFRTDLHDAEVRQRHRRMIGEAVLR YIRA" misc_feature 275859..275999 /locus_tag="PA0243" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:425684" misc_feature 276063..276419 /locus_tag="PA0243" /note="Tetracyclin repressor-like, C-terminal domain; Region: TetR_C_29; pfam17938" /db_xref="CDD:436158" gene complement(276480..277334) /locus_tag="PA0244" /db_xref="GeneID:879716" CDS complement(276480..277334) /locus_tag="PA0244" /EC_number="1.1.1.25" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="shikimate 5-dehydrogenase" /protein_id="NP_248935.1" /db_xref="GeneID:879716" /translation="MSAPRSVLAGLIGAGIQASRTPALHEREGDAQGIRYLYRLIDLD PLGKSADDLEFLLAAASDLGFTGLNVTFPCKQAIIPLLDDLSAEARGIGAVNTVVLRD GRRIGHNTDCLGFAEGFRRGLADAPRQRVVQMGAGGAGAAVAHALLAEGVERLVLFDV DPARAQALADNLNQHFGAPRALAGSDLAGALGDAQGLVNTTPVGMAKLPGMPVPAELL RADLWVAEVIYFPLETELLRQARALGCRTLDGGTMAVFQAVKAFELFSGVTADAARMQ AHFASLGD" misc_feature complement(276483..277325) /locus_tag="PA0244" /note="shikimate 5-dehydrogenase; Reviewed; Region: PRK12549" /db_xref="CDD:183586" gene complement(277331..277777) /gene="aroQ2" /locus_tag="PA0245" /db_xref="GeneID:882159" CDS complement(277331..277777) /gene="aroQ2" /locus_tag="PA0245" /EC_number="4.2.1.10" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-dehydroquinate dehydratase" /protein_id="NP_248936.1" /db_xref="GeneID:882159" /translation="MTRTVLVLNGPNLNLLGTREPQTYGRRTLGEIADECAAFAETRG FAVDFRQTNQEGQLLDWIHQARGRVAGIVINPAAWTHTSVALRDALAAVELPVVEVHL SNVHQREAFRHHSYVSPVALGVICGFGSLGYRLALEHFAERFEAAA" misc_feature complement(277340..277774) /gene="aroQ2" /locus_tag="PA0245" /note="3-dehydroquinate dehydratase [Amino acid transport and metabolism]; Region: AroQ; COG0757" /db_xref="CDD:440520" gene complement(277894..279399) /locus_tag="PA0246" /db_xref="GeneID:881952" CDS complement(277894..279399) /locus_tag="PA0246" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_248937.1" /db_xref="GeneID:881952" /translation="MSDLAQNPPAVRTVLAGLMLSIFLSALDQTIVAVSLPAISADYA DLDLLAWVISAYMVAMTVSMPIYGKLGDLYGRRRLMLFAIVVFTAASLLCGLAQSMGQ LVLARVLQGIGAGGLMAVSQAIIGDIVPPRERGRYQGYFSSMYAIASVAGPVLGGLLT EYLSWHWVFWINLPIGLLALAISRRTLVGLPVPRRQPVIDYLGIVLMVVGLTALLLAI TQIGQGAAWSDPALLGLFALAALALLLFVAQERRFREPLVPMQLFAVRAATLSWLVAF FASFQAISLTVLVPLRYQSVTGAGADSAALHLLPLVMGLPLGAYCCGRLTASLGRYKP LILLGAVLLPCGIAGLALVPVGDHWLSGLCMLLTGIAIGTQFPTSLVAAQNAVEQRHI GVATSNATLFRSLGGAVGVALMSAILLALLKHLRIGGGLDQGFSESALLSSLDAASGP ARVILQHVLADAFKVLFLVNAAVALLGLAVASALPDMTLRGRGATQPTAGE" misc_feature complement(278137..279348) /locus_tag="PA0246" /note="Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_Azr1_MDR_like; cd17502" /db_xref="CDD:341045" misc_feature complement(order(278179..278181,278188..278193, 278200..278205,278212..278214,278260..278262, 278272..278274,278284..278289,278443..278445, 278455..278457,278539..278541,278548..278556, 278563..278568,278575..278577,278953..278955, 278962..278967,278974..278976,279034..279036, 279043..279051,279055..279060,279208..279210, 279301..279303,279310..279315,279322..279327)) /locus_tag="PA0246" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341045" gene complement(279574..280758) /gene="pobA" /locus_tag="PA0247" /db_xref="GeneID:882128" CDS complement(279574..280758) /gene="pobA" /locus_tag="PA0247" /EC_number="1.14.13.2" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="4-hydroxybenzoate 3-monooxygenase" /protein_id="NP_248938.1" /db_xref="GeneID:882128" /translation="MKTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIR AGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQ TEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDG FHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSHELIYANHPRGFALCSQRSATR SRYYVQVPLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEKSIAPLRSFVVEPM QHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGRGELLERYSAICLR RIWKAERFSWWMTSVLHRFPDTDAFSQRIQQTELEYYLGSEAGLATIAENYVGLPYEE IE" misc_feature complement(279583..280758) /gene="pobA" /locus_tag="PA0247" /note="4-hydroxybenzoate 3-monooxygenase; Validated; Region: PRK08243" /db_xref="CDD:236198" protein_bind complement(280737..280749) /gene="pobA" /locus_tag="PA0247" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0247" /bound_moiety="AmrZ" gene 280936..281802 /locus_tag="PA0248" /db_xref="GeneID:881969" CDS 280936..281802 /locus_tag="PA0248" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248939.1" /db_xref="GeneID:881969" /translation="MTDSTRDVPVFKLYGAPLEWPTPDLLHCESIPARSRLHDWEIKP HRHADLAQLLYVRKGWAQLQVEGEPTRVEQPSIQFVPPLCIHGFQFSERIDGYVLTLA APLLARLQAHLGAQRQALEAPGLYPVGADRRYIDTLFDAIDGEYAGAAPARELLLQSL IGVLAVWLGRQVMVRRAEARPGRGQEYLSAFSQLVERHFREHLGIDEYARRLGISPAH LNGVARRLSGQTALGIVHQRLLLEAKRDLVYTAMTVNEIADRLGFSEPAYFTRFFKRL SGVSPSVFRKGD" misc_feature 280957..281250 /locus_tag="PA0248" /note="AraC/XylS family transcriptional regulators similar to HpaA, N-terminal cupin domain; Region: cupin_HpaA-like_N; cd06999" /db_xref="CDD:380403" misc_feature 281065..281790 /locus_tag="PA0248" /note="4-hydroxyphenylacetate catabolism regulatory protein HpaA; Region: HpaA; TIGR02297" /db_xref="CDD:131350" gene complement(281799..282245) /locus_tag="PA0249" /db_xref="GeneID:880888" CDS complement(281799..282245) /locus_tag="PA0249" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_248940.1" /db_xref="GeneID:880888" /translation="MSSPPKIRRYIPADRDATLAIWLEASRVGHGFLGEAELQKQKAL VRDHYLDASETWLALDGDTPLGFIGLLDAFIGGLFVAPTAHGRGIGRQLVEHAATLKG ALEVEVYAANREALGFYARCGFVESGRRPRDDEGRALEIVQLRREH" misc_feature complement(281871..282227) /locus_tag="PA0249" /note="NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, from bacterial antibiotic resistance to circadian rhythms in mammals. Members...; Region: N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate; cl17182" /db_xref="CDD:473072" misc_feature complement(order(281973..281978,282006..282014)) /locus_tag="PA0249" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene complement(282323..282757) /locus_tag="PA0250" /db_xref="GeneID:879262" CDS complement(282323..282757) /locus_tag="PA0250" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248941.1" /db_xref="GeneID:879262" /translation="MKTVAQLLNAKQNQQVYTIGADEMVLDALRLMAEKNIGALLVVN HGEVVGVVSERDYARKMVLKGRSSIGTPISAIMSAPVVSVDSKQSVDTCMNLMTDRHL RHLPVVEDGQLLGLLSIGDLVKAAIAEQAELIQQLEQYIRGD" misc_feature complement(282386..282721) /locus_tag="PA0250" /note="Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and eukaryotes; Region: CBS_pair_bac_euk; cd04623" /db_xref="CDD:341391" misc_feature complement(order(282386..282388,282395..282400, 282404..282406,282410..282412,282446..282448, 282635..282643,282707..282715,282719..282721)) /locus_tag="PA0250" /note="ligand binding site II [chemical binding]; other site" /db_xref="CDD:341391" misc_feature complement(282527..282721) /locus_tag="PA0250" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341391" misc_feature complement(order(282398..282400,282440..282448, 282512..282514,282581..282583,282590..282595, 282605..282607,282641..282643)) /locus_tag="PA0250" /note="ligand binding site I [chemical binding]; other site" /db_xref="CDD:341391" misc_feature complement(282386..282514) /locus_tag="PA0250" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341391" gene complement(282912..283553) /locus_tag="PA0251" /db_xref="GeneID:881983" CDS complement(282912..283553) /locus_tag="PA0251" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248942.1" /db_xref="GeneID:881983" /translation="MNDYIARLREKYDAHFGCAPAMTLDCRDFWRHCVAAPEMAVFAY RLESTRRPHHVVITAGMSQAPMHFAPYMGKARWSAELICYLDELGGDDLRHLQWLAGL PFHERLALGHGHAVAFGFPLYEQSLLRHFLLLPAPLEEDASLFDGFALSAHPVDLLWV VPLTEQEYQVNVKEHLEGIARLLTDAGHPLSLDRHRYCYVTGQSPEGLARVLH" misc_feature complement(282966..283415) /locus_tag="PA0251" /note="Suppressor of fused protein (SUFU); Region: SUFU; pfam05076" /db_xref="CDD:461543" gene complement(283818..284105) /locus_tag="PA0252" /db_xref="GeneID:879677" CDS complement(283818..284105) /locus_tag="PA0252" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248943.1" /db_xref="GeneID:879677" /translation="MGGLRKPIRPAMPRHPHTTLLLCLCLTLPGCESGRSYSLSEGAP VTGIRIQRDDRSPLQRLRDCERQGCSERQKIDPFTPDPDYLRAEGHFPLPW" protein_bind 284111..284123 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0252" /bound_moiety="AmrZ" gene complement(284197..284673) /locus_tag="PA0253" /db_xref="GeneID:881936" CDS complement(284197..284673) /locus_tag="PA0253" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248944.1" /db_xref="GeneID:881936" /translation="MTGPMTETNALGLPQGPLYLMTEIVRQRERQLTALLAPLELGLH EWRALRIIHAFDGDVPMSVLIEHSQTDRTALGRTIERLVRRGWVSRLPDPDDGRAVLV RRSPAAQAVFEQALAQVAGLDERLLAGLGSGPEEEALTLVLGKLLRAFDGLSRVRQ" misc_feature complement(284227..284619) /locus_tag="PA0253" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" gene complement(284714..286204) /locus_tag="PA0254" /db_xref="GeneID:881878" CDS complement(284714..286204) /locus_tag="PA0254" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248945.1" /db_xref="GeneID:881878" /translation="MNRSALDFRHFVDHLRRQGDLVDVHTEVDANLEIGAITRRVYER RAPAPLFHNIRDSLPGARVLGAPAGLRADRARAHSRLALHFGLPEHSGPRDIVAMLRA AMRAEPIAPRRLERGPVQENVWLGEQVDLTRFPVPLLHEQDGGRYFGTYGFHVVQTPD GSWDSWSVGRLMLVDRNTLAGPTIPTQHIGIIREQWRRLGKPTPWAMALGAPPAALAA AGMPLPEGVSEAGYVGALVGEPVEVVRTQTNGLWVPANTEIVLEGEISLDETALEGPM GEYHGYSFPIGKPQPLFHVHALSFRDQPILPICVAGTPPEENHTIWGTMISAQLLDVA QNAGLPVDMVWCSYEAATCWAVLSIDVQRLAALGTDAAAFAARVAETVFGSHAGHLVP KLILVGNDIDVTEIDQVVWALATRAHPLHDHFAFPQIRDFPMVPYLDAEDKARGSGGR LVINCLYPEQFAGQMRAATASFRHAYPTALRRRVEERWSDYGFGDA" misc_feature complement(284732..286186) /locus_tag="PA0254" /note="3-polyprenyl-4-hydroxybenzoate decarboxylase [Coenzyme transport and metabolism]; Region: UbiD; COG0043" /db_xref="CDD:439813" gene complement(286338..287024) /locus_tag="PA0255" /db_xref="GeneID:879587" CDS complement(286338..287024) /locus_tag="PA0255" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248946.1" /db_xref="GeneID:879587" /translation="MVGSSARRLRLRRTRGRVGLGLVAGLSVLAGMTDAIGFLATGDF VSFMSGNTTRLAVSLGEGDFGGLVRLSVALASFVVGNALGVILARFSGRRAAPILVCC AMLLALSAVWPFDWNVPALVAAILAMGMLNAVVEQVNGLPIGLTYVTGALSRFGRGLG RWLLGERRNGWRVQLVPWSGMCVGAVLGALLEQQLGLAAMAASAALAALLALLALVIP RPWQMDYMVR" misc_feature complement(286443..286967) /locus_tag="PA0255" /note="Uncharacterized membrane protein YoaK, UPF0700 family [Function unknown]; Region: YoaK; COG3619" /db_xref="CDD:442837" gene complement(287188..288120) /locus_tag="PA0256" /db_xref="GeneID:881894" CDS complement(287188..288120) /locus_tag="PA0256" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248947.1" /db_xref="GeneID:881894" /translation="MRSWHGVVTKIAKQGKGAVVKNRLGPEELLVPFTVSTLVEVDLD ARIYGTDVDDTPWAEGDERKEVLVGTEVELLTDTDTFPTHASQVLSANFRFALDIVKG GLSGPVRKGAVLVIYHDFQQEIRRGDSGSAFAEAVVAYARNKLYKPAFAIKADTNYAQ LVRDLGKVAAESGEQYFIDTILIATHGTAGQLWLGNPHGDSTADVMARRVQGKQFVEP QAFGATLLELFGKELAIALYGCDFAGDEDGEAAALELRIAANARAVYAGKGTVYLNAS KEGRSTVTCSKAMVVYRTDKIEVLGGNQVPVFDI" misc_feature complement(<287371..>287589) /locus_tag="PA0256" /note="Domain of unknown function (DUF4347); Region: DUF4347; pfam14252" /db_xref="CDD:433811" gene complement(288384..289175) /locus_tag="PA0257" /db_xref="GeneID:880116" CDS complement(288384..289175) /locus_tag="PA0257" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248948.1" /db_xref="GeneID:880116" /translation="MSRQAYYKRNRAADSKARQADRVVEFVQQIRIRQPRLGTRKLHY LLHCQPDRRLQIGRDRLFQVLGERRLLVLPKRAYHKTTQSFHRFYRHPNLLKSGPNQV VPSGPEHVWAADITYLPASSGPLYLSLVTDAYSRKIVGHHVHESLHAKSVAQAFRQAL RKRQRRQSLVHHSDRGIQYFSALYQSLHARHGVQCSMTDGYDCYQNALAERIYGILKT ELLLSSPENLEQARKMVAEAVQIYNTERPHMALKNKTPDAVHRAF" misc_feature complement(288396..>289175) /locus_tag="PA0257" /note="IS3 family transposase; Region: transpos_IS3; NF033516" /db_xref="CDD:468052" gene complement(289205..289390) /locus_tag="PA0258" /db_xref="GeneID:880870" CDS complement(289205..289390) /locus_tag="PA0258" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248949.1" /db_xref="GeneID:880870" /translation="MSDPKTLTPEQRIKELEQQLELMSQKDQFFETVVDVLKNDYGVS VVKKRSGKSSRKVKSQD" gene complement(289562..291004) /locus_tag="PA0259" /db_xref="GeneID:881892" CDS complement(289562..291004) /locus_tag="PA0259" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248950.1" /db_xref="GeneID:881892" /translation="MSADAYHPPTTSPRLETLDVLSIGMSLDVFRQGQVWKALQEQNA AQAEALHVGSILPMDPKKYPTSADDKDMAYEKRQADALELGLKNFLEKWPIPTVTVVR GWDPSTPNLRFTPEETRESLSVKVNDLRVPAGLHWHRIANLQDGIICNDTPEGVLEAL FSLFERNPDLPAVLVYANEGISMAGALSSRDVTLKSLGAVSGPRIPGTLTDAMVALIV GRPERVDWLRQFAPYTKVNENRIDPEFRGWGWRKPPVEFRPTPFIPQPWTERALEQWD ALPVLARLHRPVSVPLTHPDTGERLKREALTAQLAAAWKTASAGLRPAPARLFYDGGL NATPLAELTPALGAAQSSLDLLDSRESYDLTQRLGDTGAASPFVGITLATMASYLNGD SSMVMPLRRKDQATLIGISSPTPGKKPVHDPFGVDLLPQTASGDGPPPSADPVAPASR LTTRLPPGEDYALEEFLSSLKPSTDWQDDL" misc_feature complement(289751..290974) /locus_tag="PA0259" /note="Protein of unknown function (DUF2875); Region: DUF2875; pfam11394" /db_xref="CDD:288282" gene complement(291154..293304) /locus_tag="PA0260" /db_xref="GeneID:879499" CDS complement(291154..293304) /locus_tag="PA0260" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248951.1" /db_xref="GeneID:879499" /translation="MNDRVRSRTIVSAQSITLPKGGDVHLVPPPPKPCVTIVVHGVND LAGCYERIERGLCQGLNERLDMPPTLPGGQANPGYLTPAGYSLPADDEGKAENPDVVY YRRKFASGAGGAAVRSVVVPFYWGFREEEQYINKTAAHGEWLDRNGNRLDKSGTKEGG QFVNATTNLPDMWGQGFNGKLFGFISLDWFGGTMTHPLFSAAGRKYMVLAAMRLAMLI KIIRKRYPDDTINVVGHSQGTLLTLLAHAFLKDDGVAPADGVIMLNSPYGLFEPLNEK LQGWSSQQTREARLATLKGILEFICGRRHPVPALSSVALRNCQGYGAIGGPGWVGGQG CQTTIDGERLSFDERDNRGSVYLYFTPQDQTVGLANVQGIGWRGIAEQVKGLPGRTGL PQGFHQRIFTVRKRNGEKEKIGGHAPPHVYPLLLAGEKTWEDTGLGGKDRFGRANFDQ GDSVLLTAPRLPLPTEARFDFDGAVTAPGENSASGVYQVRDTLDPIDAAIGVSNGGWK EKDSGHAVAQQVDAALAYRYGRDARSVERALNEGKELAQQTHVFSARELGTGMVLVTR AETPYEARLRLQTAEGHLEPLSFHSAIPNNPEHNRRVLAYDLAIGAGDSVDDVVFYQY LCRVADWRLDWKASDKGIFSQGDASVDLPDEEVRALYRAEESKNSQLIDATVAYRKSG EFPVVVGNRLPSLVGTQTILDRYHEQAVRFGGTI" misc_feature complement(292507..>292674) /locus_tag="PA0260" /note="Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and metabolism]; Region: EstA; COG1075" /db_xref="CDD:440693" misc_feature complement(291250..292152) /locus_tag="PA0260" /note="Protein of unknown function (DUF3274); Region: DUF3274; pfam11678" /db_xref="CDD:371665" gene complement(293301..293798) /locus_tag="PA0261" /db_xref="GeneID:881884" CDS complement(293301..293798) /locus_tag="PA0261" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248952.1" /db_xref="GeneID:881884" /translation="MKCKTLLIACLFGLGSAQALAVSKLPPQIPVHAGSGRVTLDLRP LLAETNDVEITRVSVCRRVGSHCQETLWRIELPPGWRAGEIEVFGDYPGSSVLLRRPE RLQPDGSYNAFIHFNERSRRHRQTVSSIAVEFCLAGEPGNWMLLDEATCLARRNAEER QGEKP" gene complement(293802..296861) /locus_tag="PA0262" /db_xref="GeneID:881981" CDS complement(293802..296861) /locus_tag="PA0262" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248953.1" /db_xref="GeneID:881981" /translation="MRQRDLKFTFVVGEGKLAFDVVEFELEEALCEPFRLNLKLASDK NAIDFKQVLDQPGTFTLWQDGRPARYVHGIVSHFTQGSSGFRRTRYELLLEPQLARLE LCCNWRIFQEKSVPEILQALLKEHRVLDYEQRIYHEHLPREYCVQAGDSDHYLHDRLA FEEGLVYYFRFDEHRHTLVCSDRLYVQERIAGGPVLFSAQPEGDNPQPVLHSFRYSEN VRTARQTQRDYSFKRPTYDQEHHLAGEALEHQGSSYERYDYPGRYKRSGAGRPFTESR LRGHRRDARVASVSGDDPRLIPGHAFALEGHPRADFNAWWRPVRVVHRGTQYAGQEEE SADAPLGVSYDLRAELVPEDVEWRPAPLPRPRIDGPQIATVVGPAGEEIHCDEWGRVK VQFPWDREGRHDEFSTCWIRVAQNWAGADWGHMAIPRIGQEVIVDYLDGDCDQPIVTG RTYRATNRPPYALPDHKILSTIKSKEYKGSRANELRIDDTTAQISAALMSDHGASALH LGYLTHPRPEGGKPRGEGFELRTDEHGAVRAAKGLLLSTEEQLRAGAGHLDRGVVVQV LEAALELARELGDYAGEHQGVGHDAAPQQTLQEAVRDLGHGANDESGKSNGGKPAIAL SGPAGIAAATPASLTLAAGEHVDSVARQNQQVTAGQKVVINAGSDIGLFAQGGELRQI THQGPMLLQAQKNDIRLEAKQSVEVSASQQHVLVTAKEHITLMCGGAYLTLKGGNIEL GMPGNFVVKAAKHSHVGAASLEAELPQFEVGETQRRFVLKQLDGQTAMPNVPYTITMA NGEVIEGVTDAEGATQLLQKDAMNIAKVDMKHTKSPASAVAGIAAAVGAAVAVGKLLG GPDAEAGRALSEGEISLAKGVFGDSIDYSTVRLRDEDYVPWQGKDYVMAPNGHIYFGE ELRGVADWSLESLQRQGLFIHEMTHVWQHQHGVNVLLVGAYQQARQFLLGDQYAYRLE PGKTLKDYNIEQQGDIVRDYFLEKNEFGEASANSRFAGVLKNFPTGY" misc_feature complement(294702..296861) /locus_tag="PA0262" /note="Uncharacterized conserved protein VgrG, implicated in type VI secretion and phage assembly [Intracellular trafficking, secretion, and vesicular transport, Mobilome: prophages, transposons, General function prediction only]; Region: VgrG; COG3501" /db_xref="CDD:442724" gene complement(297043..297561) /gene="hcpC" /locus_tag="PA0263" /db_xref="GeneID:880866" CDS complement(297043..297561) /gene="hcpC" /locus_tag="PA0263" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="secreted protein Hcp" /protein_id="NP_248954.1" /db_xref="GeneID:880866" /translation="MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGF NHEVIIPRDPQSGQPTGQRVHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYRTS AAGTQEHYYTTVLEDAIIVDIKDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGT SGSDDWRSPVAG" misc_feature complement(297055..297558) /gene="hcpC" /locus_tag="PA0263" /note="type VI secretion system effector, Hcp1 family; Region: VI_effect_Hcp1; TIGR03344" /db_xref="CDD:213799" gene complement(298816..298892) /locus_tag="PA0263.1" /db_xref="GeneID:3240233" tRNA complement(298816..298892) /locus_tag="PA0263.1" /product="tRNA-Arg" /db_xref="GeneID:3240233" protein_bind 299136..299148 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0264" /bound_moiety="AmrZ" gene 299522..300973 /gene="gabD" /locus_tag="PA0265" /db_xref="GeneID:881913" CDS 299522..300973 /gene="gabD" /locus_tag="PA0265" /EC_number="1.2.1.16" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutarate-semialdehyde dehydrogenase DavD" /protein_id="NP_248956.1" /db_xref="GeneID:881913" /translation="MQLKDAKLFRQQAYVDGAWVDADNGQTIKVNNPATGEIIGSVPK MGAAETRRAIEAADKALPAWRALTAKERANKLRRWFDLMIENQDDLARLMTIEQGKPL AEAKGEIAYAASFLEWFGEEAKRIYGDTIPGHQPDKRIIVIKQPIGVTAAITPWNFPS AMITRKAGPALAAGCTMVLKPASQTPYSALALAELAERAGIPKGVFSVVTGSAGEVGG ELTSNPIVRKLTFTGSTEIGRQLMAECAQDIKKVSLELGGNAPFIVFDDADLDAAVEG ALISKYRNNGQTCVCANRLYVQDGVYDAFVDKLKAAVAKLNIGNGLEAGVTTGPLIDA KAVAKVEEHIADAVSKGAKVVSGGKPHALGGTFFEPTILVDVPKNALVSKDETFGPLA PVFRFKDEAEVIAMSNDTEFGLASYFYARDLARVFRVAEQLEYGMVGINTGLISNEVA PFGGIKASGLGREGSKYGIEDYLEIKYLCLGGI" misc_feature 299522..300964 /gene="gabD" /locus_tag="PA0265" /note="NADP-dependent succinate-semialdehyde dehydrogenase I; Region: gabD; PRK11241" /db_xref="CDD:183050" misc_feature order(299723..299725,299750..299752,299873..299875, 299882..299887,299891..299917,299933..299941, 299954..299956,300200..300202,300236..300238, 300248..300250,300257..300259,300428..300430, 300440..300442,300578..300580,300782..300784, 300788..300793,300803..300805,300809..300811, 300818..300820,300824..300844,300860..300862, 300869..300874,300890..300892,300905..300907, 300941..300961) /gene="gabD" /locus_tag="PA0265" /note="tetramerization interface [polypeptide binding]; other site" /db_xref="CDD:143421" misc_feature order(299978..299992,300014..300016,300059..300061, 300065..300070,300212..300223,300230..300232, 300239..300244,300284..300292,300386..300388, 300677..300679,300683..300685,300761..300763, 300875..300877) /gene="gabD" /locus_tag="PA0265" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:143421" misc_feature order(299990..299992,300284..300286,300377..300379, 300386..300388) /gene="gabD" /locus_tag="PA0265" /note="catalytic residues [active]" /db_xref="CDD:143421" gene 301218..302498 /locus_tag="PA0266" /db_xref="GeneID:880917" CDS 301218..302498 /locus_tag="PA0266" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="5-aminovalerate aminotransferase DavT" /protein_id="NP_248957.1" /db_xref="GeneID:880917" /translation="MSKTNESLLKRRQAAVPRGVGQIHPVVAERAENSTVWDVEGREY IDFAGGIAVLNTGHLHPKVIAAVQEQLGKLSHTCFQVLAYEPYIELAEEIAKRVPGDF PKKTLLVTSGSEAVENAVKIARAATGRAGVIAFTGAYHGRTMMTLGLTGKVVPYSAGM GLMPGGIFRALAPCELHGVSEDDSIASIERIFKNDAQPQDIAAIIIEPVQGEGGFYVN SKSFMQRLRALCDQHGILLIADEVQTGAGRTGTFFATEQLGIVPDLTTFAKSVGGGFP ISGVAGKAEIMDAIAPGGLGGTYAGSPIACAAALAVLKVFEEEKLLERSQAVGERLKA GLREIQAKHKVIGDVRGLGSMVAIELFEGGDTHKPAAELVSKIVVRAREKGLILLSCG TYYNVIRFLMPVTIPDAQLEKGLAILAECFDELA" misc_feature 301221..302495 /locus_tag="PA0266" /note="4-aminobutyrate--2-oxoglutarate transaminase; Region: PRK08088" /db_xref="CDD:236149" misc_feature order(301548..301556,301632..301637,301641..301643, 301836..301838,301935..301937,301941..301946, 302022..302024) /locus_tag="PA0266" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99735" misc_feature order(301551..301556,301632..301637,301836..301838, 301935..301937,301944..301946,302022..302024) /locus_tag="PA0266" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature 302022..302024 /locus_tag="PA0266" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 302824..304023 /locus_tag="PA0267" /db_xref="GeneID:880697" CDS 302824..304023 /locus_tag="PA0267" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248958.1" /db_xref="GeneID:880697" /translation="MSAAKKAPVILIADPDPWSRDLLGQLVLGVRCDARLVLCGDGGE ALAHCRRRRFALILAELNLPQVDGFELLREARLRRSVAEQPFILISDRADQASVRAAV ALAPTAYLVKPFQAENLMQRLRGLLLKGDEVVACPLPERDAGENLEAFLERARDSAEG APLLADVRAASDRCLSAEEHPLRVLEAEFGRDPQITAGLIAAANSAARHVGPACQTLG QALRRLGLGHSLNLVLGFSLQRAIQLGEPLLAERAMHFWDLSQRCADIAWELADALGA DVERCYTAGLLHRLGDLALLRTLQDWCDGGGALDEARLDELLGRFGASFGSALRARWR LPLELRRLIAAAYQFGGVLSREELILSLATQAASLPEDDAEQLAESKAARMLGLDGER LAKLLQP" misc_feature 302851..303204 /locus_tag="PA0267" /note="DNA-binding response regulator DpiB of citrate/malate metabolism [Transcription, Signal transduction mechanisms]; Region: CitB; COG4565" /db_xref="CDD:443622" misc_feature 303307..303870 /locus_tag="PA0267" /note="HDOD domain; Region: HDOD; pfam08668" /db_xref="CDD:430141" gene complement(304177..305598) /locus_tag="PA0268" /db_xref="GeneID:880732" CDS complement(304177..305598) /locus_tag="PA0268" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248959.1" /db_xref="GeneID:880732" /translation="MELQLILDGRHDLVGQLYRQLRDAILHGRLATGDRLPATRYLAE RLEVSRKTVSEAYERLASEGFLEGRVGSGTFVARGPAGEAPPQRADGPLRPAARWARI EPQSGLMDQRAPLRYSFAGGTTDKRRFPFDTWRTCVLQALRLQQRSPAFYKETEGDPE LRLAISRYLAINRAVQCDWNALMVTQGAQQGLDLLARVMLDPGDLAVVEEPGYPPARA SLLATGAEVRGVPVDAEGLRVDLLPDNAKLVYVTPSHQFPLGMPMSLERRLQLLDWAQ RHRALIIEDDYDSEYRFDGRSLESLRSLDRNGQVAYLGTFSKTLFPELRLGYLLPPAS LREAVLAARKLVDRHSETLQQRALALFIQRGDFARHTRRLQREYAQRRGRLLERLHGD LSPWLEALPAVAGIHLAARCREPLDVLRIARHLRQQGLEVGTLPPFYAETPAQAGFLF GFGCIERDDIDPALDLLRAELRR" misc_feature complement(304180..305598) /locus_tag="PA0268" /note="DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; Region: ARO8; COG1167" /db_xref="CDD:440781" gene 305725..306162 /locus_tag="PA0269" /db_xref="GeneID:883021" CDS 305725..306162 /locus_tag="PA0269" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248960.1" /db_xref="GeneID:883021" /translation="MTTRLEWAKASPDAYAAMLGLEKALAKAGLERPLIELVYLRTSQ INGCAYCVNMHANDARKAGETEQRLQALCVWQETPYFTPRERAALAWTEQLARLSQGA LPHGLLDELREHFDDKEIAELTLAVSAINAWNRFGVGMGMQPE" misc_feature 305755..306159 /locus_tag="PA0269" /note="Alkylhydroperoxidase family enzyme, contains CxxC motif [Inorganic ion transport and metabolism]; Region: YciW; COG2128" /db_xref="CDD:441731" gene 306174..306581 /locus_tag="PA0270" /db_xref="GeneID:880648" CDS 306174..306581 /locus_tag="PA0270" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248961.1" /db_xref="GeneID:880648" /translation="MKANRSIACLLLAALPTLASAHVAEKVETLHDQALAEIPGHRGL MLTVSFKPGQVSAPHVHPGSVFVYVLEGTVQTQLEGGSVETYTVGQSWYEPANVPHLL ARNPDPMKPAKLLVWELLKEGDPILKPLERGAH" misc_feature 306246..306554 /locus_tag="PA0270" /note="Bradyrhizobium japonicum BLR7677 and related proteins, cupin domain; Region: cupin_BLR7677-like; cd02234" /db_xref="CDD:380362" gene 306615..306899 /locus_tag="PA0271" /db_xref="GeneID:880607" CDS 306615..306899 /locus_tag="PA0271" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248962.1" /db_xref="GeneID:880607" /translation="MSASQVIRIRARNGQSERLGLRLQQLVEPGLEAPGCLEYQVRRD ALEPDLWLVCSQWREAQQMFDYLAGGIQQVFAEVLWRSLAASLEVQDDAG" misc_feature 306627..306842 /locus_tag="PA0271" /note="Antibiotic biosynthesis monooxygenase; Region: ABM; pfam03992" /db_xref="CDD:427635" gene complement(306896..307828) /locus_tag="PA0272" /db_xref="GeneID:877827" CDS complement(306896..307828) /locus_tag="PA0272" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248963.1" /db_xref="GeneID:877827" /translation="MLIANGLRKVDMQDLLVFLQVHQRQNLVEVAEHLNLSPSTVSYC LKKLRQAFDDELFIATRGGMQPTHKSRAMLPHVEEMLARINACHAAQGSFDPRGEPRT FTLCAPEYVELLILPALLRRLAANGPRIGLDIRRLGPELPTEALLDGQVDLVFDFGPE YHRPAPELQALALFSDELLCVQDRAQPRHERLELDEFCRRRFVFPTPLDASNANLVDT WLRRQGRSREVAARANSYVAALQLLSGSDFVLMLPRRIHALLDDGRHHACLAPPGLPP FALHLSWSRAAEQDPANLWLREQVLIVCAELGLL" misc_feature complement(307628..307795) /locus_tag="PA0272" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(306926..307525) /locus_tag="PA0272" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold; Region: PBP2_Nitroaromatics_like; cd08417" /db_xref="CDD:176109" misc_feature complement(order(306992..306994,307193..307195, 307301..307303,307484..307486,307496..307501, 307505..307507)) /locus_tag="PA0272" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176109" misc_feature complement(order(307094..307096,307103..307108, 307115..307120,307127..307141,307226..307228, 307421..307423,307427..307441,307445..307450, 307457..307462,307466..307471,307478..307483, 307490..307495,307502..307504)) /locus_tag="PA0272" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176109" gene complement(307878..309092) /locus_tag="PA0273" /db_xref="GeneID:883091" CDS complement(307878..309092) /locus_tag="PA0273" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_248964.1" /db_xref="GeneID:883091" /translation="MPTANPPGRTLWLMAAIVLVGLNLRLSMAAVGPLLNAMRGEIAL SFGDVSLLTALPMLTLGLGMFFGLGIARRVGEWRSVALALLLIGAASALRLGSRGLPD LLGSAMLAGLGIALIQALMPALIKARFGARTPLCMGLYVTAIMAGAALSASAAPTLAE HAGWRLGLGAWAALAALALLAWWLQPGTRLRLPDAQPGRSLLRYPRTWLLVLFFGLGT ACYTCVLAWLAPYYLEQGWSAQESGLLLGFLTAMEVLSGLLAPALASRSRDRRPVLVG LTALMLAGFLGLAWAPASLPLLWALCLGLGIGGLFPMGLIVCLDHFDAPQRAGQLAAL VQGAGYLIAGVSPWIAGLLRDSLGSFTGAWLGLATVAALLLGLGLRFDPRRYAALFAE RQARGVGAESLR" misc_feature complement(307944..309053) /locus_tag="PA0273" /note="Cyanate transport protein CynX and similar proteins of the Major Facilitator Superfamily of transporters; Region: MFS_CynX_like; cd17410" /db_xref="CDD:340968" misc_feature complement(order(308064..308066,308073..308078, 308085..308090,308097..308099,308148..308150, 308160..308162,308172..308177,308322..308324, 308334..308336,308415..308417,308424..308432, 308439..308444,308451..308453,308649..308651, 308658..308663,308670..308672,308727..308729, 308736..308744,308748..308753,308901..308903, 308997..308999,309006..309011,309018..309023)) /locus_tag="PA0273" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340968" gene complement(309255..310025) /locus_tag="PA0274" /db_xref="GeneID:880785" CDS complement(309255..310025) /locus_tag="PA0274" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248965.1" /db_xref="GeneID:880785" /translation="MLRPALPAVLCLYCLLLALPARAALDDQQRALQQLQVQACRAVG SLLLLRGEGFQEQHAAQLEKDLASLDRALAAAPEGVLLRQGEKTLVARIREGAAYGPR EEDLPWRYPQQLSRALRDFLNLVERQVPPPPPGQPLPLWQLPVRVEYLSLQYLARAYL GGLETAREQPRDYLGQDESVLVPLIDRRIALLVAQSANPAGLKKLENRWEYLSQALRD LNSKSSALVSASGRPWAPIIVDRHARALSESLMRLSAE" gene complement(310134..310820) /locus_tag="PA0275" /db_xref="GeneID:880776" CDS complement(310134..310820) /locus_tag="PA0275" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248966.1" /db_xref="GeneID:880776" /translation="MNERTDYRSQLQAGRWFQGLPEALQTHLLALAQPRQLPPGQRLF ARGDAPCGLYCVVEGAIRISAVSENGKEALLILVEAPHWFGEIALFDGQARTHDAYAE GHTQLLQVPQAALLELLRREPHYWRDVALLMSHKLRLAFIALEEMALLPAAQRLARRL LMLAEGYDNSRSRQVLHLPQEQLALMLSLSRQTTNQILKDLEAQGILQLSYGGIEILD LAGLRAATHG" misc_feature complement(310149..310772) /locus_tag="PA0275" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" gene 310896..311411 /locus_tag="PA0276" /db_xref="GeneID:880723" CDS 310896..311411 /locus_tag="PA0276" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248967.1" /db_xref="GeneID:880723" /translation="MKTLVDHLAQYAAYHRDRRNIFSHFIGIPMIVLSIAVLLARPAL GFGLSPALLLALAAALFYLRLDLRFGVAMTALLALTVWGAAQLAAGTTAAWLGWGVGL FVVGWIIQFVGHYYEGRKPAFVDDLSGLIVGPLFVLAELAFLLGLRGDVQREVEERAG PTCIREHKRAA" misc_feature 310896..311339 /locus_tag="PA0276" /note="2-hydroxy fatty acid dioxygenase MPO1 (alpha-oxidation of fatty acids) [Lipid transport and metabolism]; Region: MPO1; COG4539" /db_xref="CDD:443605" gene complement(311451..312209) /locus_tag="PA0277" /db_xref="GeneID:883050" CDS complement(311451..312209) /locus_tag="PA0277" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248968.1" /db_xref="GeneID:883050" /translation="MKIRLSLSALALACATLAGCQNLPQGDLMQHGMMAVKAATLSDA EVRQVADQACAESDQQNRIAPANSKYGQRLDKIAKALGDQIDGVPVNYKVYLTEEVNA WAMANGCIRVYSGLMELMSDNEIEGVLGHEMGHVALGHTRKAAQTAYAAAAVRGAAGA SKSGALAALSGSQLGELTESLVNAQFSQSQESDADDFSYELLKKRGVNTQGLVTAFEK LAKLGGGDSSMFDSHPGSQARADHIRQRIAADRK" misc_feature complement(311472..312116) /locus_tag="PA0277" /note="Peptidase M48C Ste24p loiP-like, integral membrane protein; Region: M48C_loiP_like; cd07334" /db_xref="CDD:320693" misc_feature complement(order(311511..311513,311625..311627, 311637..311639,311805..311807,311814..311819)) /locus_tag="PA0277" /note="putative active site [active]" /db_xref="CDD:320693" misc_feature complement(order(311511..311513,311637..311639, 311805..311807,311817..311819)) /locus_tag="PA0277" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:320693" gene complement(312381..313133) /locus_tag="PA0278" /db_xref="GeneID:880729" CDS complement(312381..313133) /locus_tag="PA0278" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248969.1" /db_xref="GeneID:880729" /translation="MSVDLHALIPLIALTFLLAGFVKGVVGLGLPTVSVGLLGLAMPP MQAAALLIVPSMVTNLWQLACGPRFLGLMKRLAGLLLGVVVGTLLVGAWLGGDAPRQA TGVLGLALVAYALLGLAAIPLHLPARHEPWAGPLVGLATGALTAVTGVFVIPAVPYLG ALGLQRDELVQALGLSFSASTLALAVTLGVHGDLLEPQMLGASLLTLVPALGGMLLGQ WLRQRISATLFRRCFFVGLLLLGADLAWRGFH" misc_feature complement(312429..313097) /locus_tag="PA0278" /note="Sulfite exporter TauE/SafE; Region: TauE; pfam01925" /db_xref="CDD:460386" gene 313227..313925 /locus_tag="PA0279" /db_xref="GeneID:883024" CDS 313227..313925 /locus_tag="PA0279" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248970.1" /db_xref="GeneID:883024" /translation="MQFNPGFSSLAALLADPGRAQMIWALMDGSARPASELALLAGVS PSSASGHLGRLVEGGVLSLEARGRNRFYRLAGPEVGQAVEALASASLALQPQRRSLPP SHGTPSALREARTCYDHLAGELAVGVFARMLDAGWIEQEGRTLRLSATGEAGLAGLGI DLAEVRRRRRQFACACPDWSERKPHLGGALGAALLEACLRQGWLRPQDGSRALQVSSK GRAGLRGLAERTAG" misc_feature 313227..313490 /locus_tag="PA0279" /note="DNA-binding transcriptional regulator, ArsR family [Transcription]; Region: ArsR; COG0640" /db_xref="CDD:440405" gene complement(313938..314927) /gene="cysA" /locus_tag="PA0280" /db_xref="GeneID:877644" CDS complement(313938..314927) /gene="cysA" /locus_tag="PA0280" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="sulfate.thiosulfate ABC transporter ATP-binding protein CysA" /protein_id="NP_248971.1" /db_xref="GeneID:877644" /translation="MSIEIRNVSKNFNAFKALDDINLDIQSGELVALLGPSGCGKTTL LRIIAGLETPDAGNIVFHGEDVSQHDVRDRNVGFVFQHYALFRHMTVFDNVAFGLRMK PKGERPGESAIKAKVHELLNMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKILLL DEPFGALDAKVRKELRRWLARLHEEINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQI GSPGEVYENPASDFVYHFLGDSNRLQLGNDQHLLFRPHEVSLSRSAVAEHRAAEVRDI RPLGAITRVTLKVDGQDELIEAEVVKDHDSLAGLARGETLYFKPKAFQPVANL" misc_feature complement(313962..314927) /gene="cysA" /locus_tag="PA0280" /note="ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]; Region: CysA; COG1118" /db_xref="CDD:440735" gene complement(314931..315800) /gene="cysW" /locus_tag="PA0281" /db_xref="GeneID:880705" CDS complement(314931..315800) /gene="cysW" /locus_tag="PA0281" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="sulfate transporter CysW" /protein_id="NP_248972.1" /db_xref="GeneID:880705" /translation="MSSASISAATASASRRGNAGGRLALIVLAWLVFALFLLLPLYVV LSEALKQGFGTFFEAILEPDALAALKLTLIAVAISVPLNLLFGVAAAWCVSKFEFRGK SILVTLIDLPFSVSPVIAGLIYVLLFGAQGYFGEWLSDHDIQIVFAVPGIVLATLFVT VPFVARELIPLMQEQGTQEEEAARLLGANGWQMFWHVTLPNIKWGLIYGVVLCTARAM GEFGAVSVVSGHIRGVTNTLPLHVEILYNEYNHVAAFSVASLLLLMALVILLLKQWSE SRMSRLKSNADEE" misc_feature complement(314958..315758) /gene="cysW" /locus_tag="PA0281" /note="ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; Region: CysW; COG4208" /db_xref="CDD:443356" gene complement(315811..316629) /gene="cysT" /locus_tag="PA0282" /db_xref="GeneID:880883" CDS complement(315811..316629) /gene="cysT" /locus_tag="PA0282" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="sulfate transporter CysT" /protein_id="NP_248973.1" /db_xref="GeneID:880883" /translation="MSRRISPVIPGFGLTLGYTLVYLSLLVLIPLGAMFLKTTQLSWE QFWAIISAPRVLAALKLSFGTALAAAVLNGLIGTLLAWVLVRYEFPGRKIIDAMIDLP FALPTAVAGIALTALYAPAGLVGQFASDLGFKIAYTPLGITLALTFVTLPFVVRTVQP VLADIPKEVEEAAACLGARPLQVFRHILVPALLPAWLTGFALAFARGVGEYGSVIFIA GNMPMKTEILPLLIMVKLDQYDYTGATAIGVLMLVVSFILLLLINLLQRRIETP" misc_feature complement(315814..316608) /gene="cysT" /locus_tag="PA0282" /note="sulfate ABC transporter, permease protein CysT; Region: permease_CysT; TIGR02139" /db_xref="CDD:131194" misc_feature complement(order(315862..315867,315874..315879, 315886..315891,315895..315900,315907..315912, 315940..315945,315982..315987,315994..316005, 316024..316026,316033..316038,316078..316080, 316129..316131,316138..316143,316153..316155, 316159..316164,316171..316173,316177..316179, 316183..316188,316285..316287,316291..316296, 316303..316332,316336..316347,316375..316377, 316390..316395,316402..316407)) /gene="cysT" /locus_tag="PA0282" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(order(315988..316005,316285..316329)) /gene="cysT" /locus_tag="PA0282" /note="conserved gate region [active]" /db_xref="CDD:119394" misc_feature complement(order(315910..315912,315940..315942, 315949..315951,315985..315987,316201..316203, 316285..316287)) /gene="cysT" /locus_tag="PA0282" /note="putative PBP binding loops [active]" /db_xref="CDD:119394" misc_feature complement(order(316057..316059,316069..316074, 316090..316128)) /gene="cysT" /locus_tag="PA0282" /note="ABC-ATPase subunit interface [active]" /db_xref="CDD:119394" gene complement(316791..317789) /gene="sbp" /locus_tag="PA0283" /db_xref="GeneID:881922" CDS complement(316791..317789) /gene="sbp" /locus_tag="PA0283" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="sulfate-binding protein" /protein_id="NP_248974.1" /db_xref="GeneID:881922" /translation="MSLRRFALAALASALVSGPVAAATQLLNVSYDPTRELYQAYNAA FIKHWKAQGGEDLTVQQSHGGSGKQARAVIDGLKADVVTLALAGDIDELHKLGKLLPA DWQARLPDNSTPYTSTIVFLVRKGNPKGIKDWGDLTKEGVEVITPNPKTSGGARWNFL AAWAWAKKQYGSDEKAKDYVQALYKHVPVLDTGARGSTITFVNNQIGDVLLAWENEAF LAKKEQGGENFEIVVPSISILAEPPVAVVDKVVEKKGTRKVAEAYLQYLYSEEGQRIA AQNFYRPRNQKVAAEFATQFPKLNLVTVDSDFGGWKTAQPKFFNDGGIFDQIYQAQ" misc_feature complement(316797..317741) /gene="sbp" /locus_tag="PA0283" /note="ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: Sbp; COG1613" /db_xref="CDD:441221" gene complement(317966..318148) /locus_tag="PA0284" /db_xref="GeneID:879699" CDS complement(317966..318148) /locus_tag="PA0284" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248975.1" /db_xref="GeneID:879699" /translation="MSATLRSLDGQDEATILREIQSALRGLRFGAVEITVHNGQVVQI ERKEKFRLQQPAVKQA" misc_feature complement(317969..318148) /locus_tag="PA0284" /note="sulfur starvation response protein OscA; Region: sulfur_OscA; NF033785" /db_xref="CDD:411366" gene complement(318312..320594) /locus_tag="PA0285" /db_xref="GeneID:879674" CDS complement(318312..320594) /locus_tag="PA0285" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248976.1" /db_xref="GeneID:879674" /translation="MSPRLSALRLSLAYLAIAIAWAFLSDHLLQNQVQDHDQLVFWMT AKRLFFFAATGLLLYLYLVRQFRRKAQAYDELHGSEQRLNRALEAVRDGLWDWDLVTD RMFVSPGYAALIGLAPEELGDPIETWKKRLHPEEYATVLEAHRNHLQGLTDNLDHIYR LRHKDGDYRWIHSRGRVLRDALGKPLHYTGVARDITLQRLKEDHLRQAAAVFDSTREG VLVTDAQAVIVHVNPSFERITGYRSEDVLGKTPAILRSGRQDQAFYQRLWLALREQDV WSGEIWNRRKSGEIYPQWLHIRAVRNDQGQLTHYVGVFSDLSSIKRSENELDFLAHHD SLTGLPNRVLLRERIEQALENGKDRTVAGALLLIDLDHFKHINDSLGHTTGDMLLKEV SKRLQHQLDERCLLSRLGGDEFAILVENDDPEAVARLSQRILDGFNAPFDIHCQPIYI SASLGVSLYPEDASDVDHLMQHADAALFQAKDSGRNAYAFYTRVLTARARAHVQVESA LRHALEHDELRVHYQPVHDLASGRIVGVESLVRWQHPERGLVPPGEFVPVAEECGLIA ALDNWVLKRACRQMREWQQRGVELEFVAVNVSSRLFNRGGLEERIANALEESGLEPRY LELEVTESAVMEDFEQSLNLLCRLRILGVNLAIDDFGTGYSSLMRLKRLPVHKLKIDQ GFVAGLPGAVDDAAIARAIVALAQSMGLRVVAEGIEHQDQALFLREHGCDFGQGYWYG RPQPAEALRFDLPPVALPED" misc_feature complement(318348..320339) /locus_tag="PA0285" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" gene 320766..321944 /gene="desA" /locus_tag="PA0286" /db_xref="GeneID:879596" CDS 320766..321944 /gene="desA" /locus_tag="PA0286" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="delta-9 fatty acid desaturase DesA" /protein_id="NP_248977.1" /db_xref="GeneID:879596" /translation="MWFNGFLDLSPWQLVAVTLVLTHITIVSVTVYLHRYSAHRALDL HPALQHFFRFWLWLTTGMNTREWTAIHRKHHAKCETVEDPHSPVHKGLFTVLRAGAEL YKAEAKNQDTLRIYGKNCPDDWIERNLYSRFPIGGVVLMALIDLALFGALGLTVWAVQ MVWIPFWAAGVVNGLGHAVGYRNFECRDAATNLVPWGILIGGEELHNNHHTYPNSAKL SVKKWEFDLGWAWIKLFSFLRLARVARVAPIAHRVEGKHSLDMDTAMAILNNRFQIMA QYRKLVIAPLVKQEVAKADESVRHLFRRAKRLLSRETSLLQDRHHVRIDSMLAHSQAL KVIYEKRLALQQIWAKTSANGHDMLAAIKDWVHEAEASGIQSLKEFAAQLKTYSLRPA " misc_feature 320799..321488 /gene="desA" /locus_tag="PA0286" /note="The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide...; Region: Delta9-FADS-like; cd03505" /db_xref="CDD:239582" misc_feature order(320865..320867,320880..320882,320976..320978, 320985..320990,321381..321383,321390..321395) /gene="desA" /locus_tag="PA0286" /note="Di-iron ligands [ion binding]; other site" /db_xref="CDD:239582" misc_feature <321627..321926 /gene="desA" /locus_tag="PA0286" /note="Transposase; Region: DDE_Tnp_ISL3; pfam01610" /db_xref="CDD:426344" gene 322175..323560 /gene="gpuP" /locus_tag="PA0287" /db_xref="GeneID:879633" CDS 322175..323560 /gene="gpuP" /locus_tag="PA0287" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="3-guanidinopropionate transporter" /protein_id="NP_248978.1" /db_xref="GeneID:879633" /translation="MLLDYLIMLVYALAMLGLGWYGMRKAKSQSDFLVAGRRLGPGLY LGTMAAVVLGGASTIGTVKLGYQFGLSGLWLVFMLGLGIIVLSLVFSRQIARLRVFTV TQVLEQRYQASSRLIGGVVMVAYDLMVAVTATIAIGSVTEVVFGIPRIPAILCGGGIV IVYSVIGGMWSLTLTDIIQFVIKTVGIFLVLLPLSIDGAGGLARMQEVLPAGFFDLGH IGLDTILTYFLLYFFGALIGQDIWQRVFTARSETVVRYAGLGAGVYCMLYGAACALIG AAARVLLPDLAVPENAYAEITREVLAPGLRGLVVAAALSAIMSTASGCLLAAATVLQE DIYARFLRPGTTSDIRLSRCITLLMGVAMLVLACLVNDVIAALSIAYNLLVGGLLVPI VGALLWRRASPQGAIASIVAGCLAVIACMARDGLLANSPIVYGLLASLATFVAVSLAT RPAASLRAQPE" misc_feature 322181..323536 /gene="gpuP" /locus_tag="PA0287" /note="Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain; Region: SLC5sbd_u3; cd11479" /db_xref="CDD:271373" misc_feature order(322322..322324,322331..322333,323120..323122, 323129..323134) /gene="gpuP" /locus_tag="PA0287" /note="Na binding site [ion binding]; other site" /db_xref="CDD:271373" gene 323616..324572 /gene="gpuA" /locus_tag="PA0288" /db_xref="GeneID:880781" CDS 323616..324572 /gene="gpuA" /locus_tag="PA0288" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="guanidinopropionase" /protein_id="NP_248979.1" /db_xref="GeneID:880781" /translation="MSNDHPQPLDAAEIPRFAGIPTFMRLPAFTDPAALQVGLIGVPW DGGTTNRAGARHGPREVRNLSSLMRKVHHVSRIAPYDLVRVGDLGDAPVNPIDLLDSL RRIEGFYRQVHAAGTLPLSVGGDHLVTLPIFRALGRERPLGMVHFDAHSDTNDRYFGD NPYTHGTPFRRAIEEGLLDPLRTVQIGIRGSVYSPDDDAFARECGIRVIHMEEFVELG VEATLAEARRVVGAGPTYVSFDVDVLDPAFAPGTGTPEIGGMTSLQAQQLVRGLRGLD LVGADVVEVSPPFDVGGATALVGATMMFELLCLLAESAARSA" misc_feature 323670..324536 /gene="gpuA" /locus_tag="PA0288" /note="Agmatinase-like family includes proclavaminic acid amidinohydrolase; Region: Agmatinase_PAH; cd11592" /db_xref="CDD:212538" misc_feature order(323742..323744,323751..323753,323778..323783, 323790..323792,323799..323801,323874..323876, 323883..323888,324363..324365,324375..324377, 324387..324389,324399..324404,324495..324497, 324504..324509,324516..324518,324528..324530) /gene="gpuA" /locus_tag="PA0288" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:212538" misc_feature order(323991..323993,324057..324059,324063..324071, 324108..324113,324333..324335,324339..324341, 324465..324467) /gene="gpuA" /locus_tag="PA0288" /note="putative active site [active]" /db_xref="CDD:212538" gene 324625..325587 /gene="gpuR" /locus_tag="PA0289" /db_xref="GeneID:879727" CDS 324625..325587 /gene="gpuR" /locus_tag="PA0289" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional activator GpuR" /protein_id="NP_248980.1" /db_xref="GeneID:879727" /translation="MGAGMLGNINDIDLRMLRTFCAIVEAGGFTAAQARLNTSLSRLS VLVRDLEVRLGYSLCRRGNGGFQLTEEGQELYDAALGLFSDIARFREQVRGLGGRDRE ALHLGCVDGVIGQHCLPLPLAIRLFRQRAPEVLLKLHTRRPDELEHAVLEERLQLAVG AFHHRLSGLYYQPLFREEQNLYCGSAHPFFARADDEPTLGEICAADYVGRGYMAENHR PHDLRFNQGTDAYTMEAIATLVFSGTYIGYLPTHYAATWVAEGRMRAIRPRQLAYDSE FHCITRQGHEERPTLTLFLRSLFEAQKQLGVQVPANTNGIARQL" misc_feature 324658..325527 /gene="gpuR" /locus_tag="PA0289" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 325700..326671 /locus_tag="PA0290" /db_xref="GeneID:880764" CDS 325700..326671 /locus_tag="PA0290" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248981.1" /db_xref="GeneID:880764" /translation="MDDLTGIPEDPQEAALALLHSRAEVARLKEREQLFSALLASVNS VLWAYDWQNRRMVYVSPAYEKIFGRSAALLLADYEEWRNSIYPDDLDYADSSLLQVLE RGAVEQREYRIVRGDGEVRWLNDKCFVSRQGEAGLPLMVVGIAEDITDKKHMESELQR LATTDVLTQSSNRRYFFDSAEAAFKECRREGIPLAFLLLDVDDFKKINDRFGHQVGDQ VLQRIAQSGSAALRRGDLFGRIGGEEFAVLLPGCDEQTARQIGERLQREVQRLRFQEG EHSFGITVSQGLTVLQADDEGLGALYSRADAAMYSAKRQGKDCIVVG" misc_feature 325910..326665 /locus_tag="PA0290" /note="GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants [Signal transduction mechanisms]; Region: GGDEF; COG2199" /db_xref="CDD:441801" gene 327284..328666 /gene="oprE" /locus_tag="PA0291" /db_xref="GeneID:879473" CDS 327284..328666 /gene="oprE" /locus_tag="PA0291" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="anaerobically-induced outer membrane porin OprE" /protein_id="NP_248982.1" /db_xref="GeneID:879473" /translation="MKSRKINKSRLALAITAGTLGALAQQAVAAGFIEDSKASLTLRN FYINTDNRNGTASPSKQEEWGQGFILNYQSGFTQGTVGFGVDALGLLGVRLDGGGRAG KSGLDRQPGTVFPLESNGEPVHDFASLGLTAKAKVSNTEFRYGTLQPKLPVVTYNDGR LLPVTFEGGQVTSTDLKDFTLVAGQLEHSKGRNSTDNRSLSIAGANGSSASSRDSNKF YYAGGDYKVNKDLTLQYYYGNLDDFYKQHFLGLIHNWQIGPGVLKTDLRAFDSSSDGK NGSRSGRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNGDSDFP FLNRGDGEGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDK IKTARGDQSEWERDISLAYVIPDGTFKGLGFTWKNASFRSGLPAAGSSNNQRDQDENR LIVSYTLPLL" misc_feature 327371..328657 /gene="oprE" /locus_tag="PA0291" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene complement(328801..329907) /gene="aguA" /locus_tag="PA0292" /db_xref="GeneID:879730" CDS complement(328801..329907) /gene="aguA" /locus_tag="PA0292" /EC_number="3.5.3.12" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="agmatine deiminase" /protein_id="NP_248983.1" /db_xref="GeneID:879730" /translation="MSNPTSTPRADGFRMPAEWEPHEQTWMVWPERPDNWRNGGKPAQ AAFAAVAKAIARFEPVTVCASAGQYENARARLDDGNIRVVEISSDDAWVRDTGPTFVI DDKGDVRGVDWGFNAWGGFEGGLYFPWQRDDQVARKILEIERRARYRTDDFVLEGGSI HVDGEGTLITTEECLLNHNRNPHLSQAEIERTLRDYLAVESIIWLPNGLYNDETDGHV DNFCCYARPGEVLLAWTDDQDDPNYLRCQAALRVLEESRDAKGRKLVVHKMPIPGPLY ATQEECDGVDIVEGSQPRDPSIRLAGSYVNFLIVNGGIIAPSFDDPKDAEARAILQRV FPEHEVVMVPGREILLGGGNIHCITQQQPAPRKA" misc_feature complement(328810..329895) /gene="aguA" /locus_tag="PA0292" /note="agmatine deiminase; Provisional; Region: PRK13551" /db_xref="CDD:184135" gene complement(329993..330871) /gene="aguB" /locus_tag="PA0293" /db_xref="GeneID:880699" CDS complement(329993..330871) /gene="aguB" /locus_tag="PA0293" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="N-carbamoylputrescine amidohydrolase" /protein_id="NP_248984.1" /db_xref="GeneID:880699" /translation="MTRNVTVAATQMACSWDRPANIARAEKLVRQAAARGAQIILIQE LFETPYFCQKPNPDYLQLATTVEENAAIAHFQALARELQVVLPISFFERAGRARFNSI AVIDADGGNLGVYRKSHIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFP ESARSMALLGAELLFYPTAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGR EEQDGYDITFYGSSFIADPFGEKVEELNRTEEGILVHTFDLDALERTRSAWGVFRDRR PNLYGPLKTLDGSLES" misc_feature complement(330023..330859) /gene="aguB" /locus_tag="PA0293" /note="N-carbamoylputrescine amidase; Region: agmatine_aguB; TIGR03381" /db_xref="CDD:274553" misc_feature complement(order(330335..330337,330398..330403, 330407..330412,330488..330490,330509..330511, 330521..330523,330740..330742)) /gene="aguB" /locus_tag="PA0293" /note="putative active site; other site" /db_xref="CDD:143597" misc_feature complement(order(330410..330412,330521..330523, 330740..330742)) /gene="aguB" /locus_tag="PA0293" /note="catalytic triad [active]" /db_xref="CDD:143597" misc_feature complement(order(330041..330055,330179..330184, 330257..330262,330266..330274,330278..330283, 330377..330382,330389..330403,330407..330409, 330464..330472,330491..330493,330509..330520)) /gene="aguB" /locus_tag="PA0293" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:143597" gene complement(331034..331699) /gene="aguR" /locus_tag="PA0294" /db_xref="GeneID:880857" CDS complement(331034..331699) /gene="aguR" /locus_tag="PA0294" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator AguR" /protein_id="NP_248985.1" /db_xref="GeneID:880857" /translation="MQPTSPTRKPRASSQARIAAILDAARGLLADEGIGGLSIYSVAE RAEMPPSSVYHFFPSVPALLQGLTGEVHAAFRACLEQPVDHAGLRCWRDLSRIVEERM LAVYARDAAARQLILASHGLAEVTQADRQHDVQLGQAMRALFERHFLLPPLPTDIEIF SLAMELGDRVYALSVQRHGIIDARLAEEGMRVFDAYLGLYLPPILEKRSEPLSGFISD LNR" misc_feature complement(331214..331669) /gene="aguR" /locus_tag="PA0294" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene complement(331762..332823) /locus_tag="PA0295" /db_xref="GeneID:880681" CDS complement(331762..332823) /locus_tag="PA0295" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="polyamine binding protein" /protein_id="NP_248986.1" /db_xref="GeneID:880681" /translation="MPRLSALLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDT GIRVEYHTFATAEELDKALRSGEAIDVAVPSHDTLPALLKDNLLRPLDFTQLPNRSHL DRQLLSKLAAVDPDNRHAVPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQR LKSCGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAEALHGLRPNLRYVDSERYI ADLEGGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPAGAQHPREAHR FIDYLMQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPP EKLRPVVDEIWKAFRGASH" misc_feature complement(331789..332760) /locus_tag="PA0295" /note="The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold; Region: PBP2_PotF; cd13659" /db_xref="CDD:270377" misc_feature complement(order(331936..331938,332044..332046, 332050..332052,332119..332121,332128..332130, 332740..332742)) /locus_tag="PA0295" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270377" misc_feature complement(order(331969..331974,332695..332700, 332707..332709)) /locus_tag="PA0295" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:270377" gene complement(333079..334455) /gene="spuI" /locus_tag="PA0296" /db_xref="GeneID:880840" CDS complement(333079..334455) /gene="spuI" /locus_tag="PA0296" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutamine synthetase" /protein_id="NP_248987.1" /db_xref="GeneID:880840" /translation="MSVPQRAVQLTEPSEFLKEHPEVQFVDLLIADMNGVVRGKRIER NSLNKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKR PTAQLLMTMHELEGEPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGR PQPPRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFE VNLNHVNDALKACDHAVLLKRLVKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDK HGNNIFTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWG LDNRTVALRVPTGSPDAVRLEHRVAGADANPYLLLAAVLAGVHHGLTNKVEPGAPIEG NSYEQMEPSLPNNLRDALRELDESEIMAKYIDPKYIDIFVACKESELEEFEHSISDLE YNWYLHTV" misc_feature complement(333088..334413) /gene="spuI" /locus_tag="PA0296" /note="Glutamine synthetase [Amino acid transport and metabolism]; Region: GlnA; COG0174" /db_xref="CDD:439944" gene 334734..335486 /gene="spuA" /locus_tag="PA0297" /db_xref="GeneID:880604" CDS 334734..335486 /gene="spuA" /locus_tag="PA0297" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glutamine amidotransferase" /protein_id="NP_248988.1" /db_xref="GeneID:880604" /translation="MSRLPLIGVTACTKQIGLHPYHIAGDKYLRAVVNGAGGLPLIIP ALGESIDQAALLDSVDGLLFTGSPSNVEPRHYSGPASEPGTLHDSDRDATTLPLVRAA IDAGIPVLGICRGFQEMNVAFGGSLHQKVHEVGTFMDHREPADQPLEVQYAPRHAMHV QPGGVLAGIGLPSEFQVNSIHGQGVDRLAPGLRVEALAPDGLVEAISVEGAKAFALGV QWHPEWQVLTNPNYLAIFQAFGKACSKRAGQR" misc_feature 334746..335402 /gene="spuA" /locus_tag="PA0297" /note="Peptidase C26; Region: Peptidase_C26; pfam07722" /db_xref="CDD:429620" gene 335527..336885 /gene="spuB" /locus_tag="PA0298" /db_xref="GeneID:880835" CDS 335527..336885 /gene="spuB" /locus_tag="PA0298" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glutamine synthetase" /protein_id="NP_248989.1" /db_xref="GeneID:880835" /translation="MTTKLDQLTSWLKERKITEVECLISDLTGIARGKISPTNKFIAE KGMRLPESVLLQTVTGDYVEDDIYYDLLDPADIDMVCRPDENAVFLVPWAIEPTAMVI HDTFDKLGNPIELSPRNILKRVLKMYADKGWRPIVAPEMEFYLTKRSDDPDYPLQAPV GRSGRQETGRQSFSIDAANEFDPLFEDMYDWCEAQGLDLDTLIHEEGTAQMEINFRHG DALDLADQILVFKRTMREAALKHNVAATFMAKPMTGEPGSAMHLHQSIVDVKTGKNIF SNADGTMSELFLHHIGGLQKFIPEVLPLFAPNVNSFRRFLPDTSAPVNVEWGEENRTV GLRVPDSSPENRRVENRLAGADANPYLALAASLLCGYIGMVEGIKPSAQVKGRGYERR NLRLPLTIEAALERMENCKPLEQYLGSKFISGYVAVKRAEHENFKRVISSWEREFLLL SV" misc_feature 335527..336873 /gene="spuB" /locus_tag="PA0298" /note="Glutamine synthetase [Amino acid transport and metabolism]; Region: GlnA; COG0174" /db_xref="CDD:439944" protein_bind 335800..335812 /gene="spuB" /locus_tag="PA0298" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 336951..338321 /gene="spuC" /locus_tag="PA0299" /db_xref="GeneID:878357" CDS 336951..338321 /gene="spuC" /locus_tag="PA0299" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_248990.1" /db_xref="GeneID:878357" /translation="MNSQITNAKTREWQALSRDHHLPPFTDYKQLNEKGARIITKAEG VYIWDSEGNKILDAMAGLWCVNVGYGREELVQAATRQMRELPFYNLFFQTAHPPVVEL AKAIADVAPEGMNHVFFTGSGSEANDTVLRMVRHYWATKGQPQKKVVIGRWNGYHGST VAGVSLGGMKALHEQGDFPIPGIVHIAQPYWYGEGGDMSPDEFGVWAAEQLEKKILEV GEENVAAFIAEPIQGAGGVIVPPDTYWPKIREILAKYDILFIADEVICGFGRTGEWFG SQYYGNAPDLMPIAKGLTSGYIPMGGVVVRDEIVEVLNQGGEFYHGFTYSGHPVAAAV ALENIRILREEKIIEKVKAETAPYLQKRWQELADHPLVGEARGVGMVAALELVKNKKT RERFTDKGVGMLCREHCFRNGLIMRAVGDTMIISPPLVIDPSQIDELITLARKCLDQT AAAVLA" misc_feature 336960..338312 /gene="spuC" /locus_tag="PA0299" /note="putative aminotransferase; Validated; Region: PRK07480" /db_xref="CDD:180994" misc_feature order(337314..337322,337416..337421,337425..337427, 337635..337637,337734..337736,337740..337745, 337821..337823) /gene="spuC" /locus_tag="PA0299" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99735" misc_feature order(337317..337322,337416..337421,337635..337637, 337734..337736,337743..337745,337821..337823) /gene="spuC" /locus_tag="PA0299" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature 337821..337823 /gene="spuC" /locus_tag="PA0299" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 338437..339540 /gene="spuD" /locus_tag="PA0300" /db_xref="GeneID:880655" CDS 338437..339540 /gene="spuD" /locus_tag="PA0300" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="putrescine ABC transporter substrate-binding protein SpuD" /protein_id="NP_248991.1" /db_xref="GeneID:880655" /translation="MMKRFGKTLLALTLAGSVAGMAQAADNKVLHVYNWSDYIAPDTL EKFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKS KLPNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDL VFKPENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYV TYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDM VAIPKDAENTEGALAFVNFLMKPEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYP SEEVMKKLYTFPDLPAKTQRAMTRSWTKIKSGK" misc_feature 338521..339516 /gene="spuD" /locus_tag="PA0300" /note="The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold; Region: PBP2_PotF; cd13659" /db_xref="CDD:270377" misc_feature order(338539..338541,339157..339159,339166..339168, 339253..339255,339259..339261,339367..339369) /gene="spuD" /locus_tag="PA0300" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270377" misc_feature order(338572..338574,338581..338586,339331..339336) /gene="spuD" /locus_tag="PA0300" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:270377" gene 339959..341056 /gene="spuE" /locus_tag="PA0301" /db_xref="GeneID:877626" CDS 339959..341056 /gene="spuE" /locus_tag="PA0301" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="spermidine ABC transporter substrate-binding protein SpuE" /protein_id="NP_248992.1" /db_xref="GeneID:877626" /translation="MQHSIGKTLLVAALATAIAGPVQAEKKSLHIYNWTDYIAPTTLK DFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSK LPNWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILF EPENMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSY FHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMA IPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQ AVLDKLYVSAVLPAKVLRLQTRTWTRIKTGK" misc_feature 340043..341032 /gene="spuE" /locus_tag="PA0301" /note="The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold; Region: PBP2_PotF; cd13659" /db_xref="CDD:270377" misc_feature order(340058..340060,340673..340675,340682..340684, 340769..340771,340775..340777,340883..340885) /gene="spuE" /locus_tag="PA0301" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270377" misc_feature order(340091..340093,340100..340105,340847..340852) /gene="spuE" /locus_tag="PA0301" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:270377" gene 341111..342265 /gene="spuF" /locus_tag="PA0302" /db_xref="GeneID:877636" CDS 341111..342265 /gene="spuF" /locus_tag="PA0302" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="polyamine transporter PotG" /protein_id="NP_248993.1" /db_xref="GeneID:877636" /translation="MAIASGAYKKALEGNQQPKEVLVKIDRVTKQFDETLAVDTVSLT INKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFLDGQDITDLPPYERPINMMFQS YALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLVHMTQYAKRKPHQLSGGQRQR VALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMT MAQRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNLFDGVLVEDVQDHAVIACP QLENPIYIGHGISTRAEDKRITYALRPEKVMISAQKPDNLEHAGHNWAQGTVYDIAYL GGHSVYYIKLASGMIVQAFMANAERHVARPTWDQSVYISWYDDSGVVLQS" misc_feature 341174..342256 /gene="spuF" /locus_tag="PA0302" /note="putrescine ABC transporter ATP-binding subunit PotG; Region: potG; PRK11607" /db_xref="CDD:183226" gene 342292..343173 /gene="spuG" /locus_tag="PA0303" /db_xref="GeneID:880687" CDS 342292..343173 /gene="spuG" /locus_tag="PA0303" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="polyamine transporter PotH" /protein_id="NP_248994.1" /db_xref="GeneID:880687" /translation="MPTGRHAVIGVPFLWLFLFFLLPFAIVLKISLAEADVAIPPYTE IFAYADQQLQVLLNLGNYLMLTDDPLYIDAYLGSLKMAFISTLICLLVGYPMAYAIAR SSQSSQTVLLLLIMMPTWTAILIRVYAWMGILSNNGLLNSVLMGLGLISEPLTILNTN IAVYIGIVYSYLPFMILPLYANLVKHDPSLLEAASDLGARNFTSFWKITVPLSKNGII AGCMLVFIPAVGEFVIPELLGGPETLMIGKVLWQEFFNNRDWPVASALAVVMLAILII PIILFNKNQAKELEGKV" misc_feature 342292..343167 /gene="spuG" /locus_tag="PA0303" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2; cl00427" /db_xref="CDD:444901" misc_feature order(342562..342567,342574..342579,342592..342594, 342622..342633,342637..342666,342673..342678, 342682..342684,342793..342798,342805..342807, 342811..342813,342820..342825,342829..342831, 342841..342846,342853..342855,342904..342906, 342946..342951,342958..342960,342979..342990, 342997..343002,343039..343044,343066..343071, 343078..343083,343087..343092,343099..343101) /gene="spuG" /locus_tag="PA0303" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(342640..342684,342979..342996) /gene="spuG" /locus_tag="PA0303" /note="conserved gate region [active]" /db_xref="CDD:119394" misc_feature order(342682..342684,342778..342780,342997..342999, 343033..343035,343042..343044,343066..343068) /gene="spuG" /locus_tag="PA0303" /note="putative PBP binding loops [active]" /db_xref="CDD:119394" misc_feature order(342856..342894,342910..342915,342925..342927) /gene="spuG" /locus_tag="PA0303" /note="ABC-ATPase subunit interface [active]" /db_xref="CDD:119394" protein_bind 342358..342370 /gene="spuG" /locus_tag="PA0303" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 343256..344125 /gene="spuH" /locus_tag="PA0304" /db_xref="GeneID:878265" CDS 343256..344125 /gene="spuH" /locus_tag="PA0304" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="polyamine transporter PotI" /protein_id="NP_248995.1" /db_xref="GeneID:878265" /translation="MKRWNFSNVMLIVGLLFIYLPMLILVIYSFNASKLVTVWGGWSV KWYVGLLDNTQLVSSVGRSLEIAFYTAFSSVFLGTLAAFVLTRIPRFRGRTLFGGMVT APLVMPEVITGLSLLLLFVAMAQLIGWPQERGIVTIWIAHTSFCSSYVAVVVSARLRE LDLSIEEAAMDLGAKPWKVFLLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGS TTLPMEVFSAVRLGVKPEINAVASLILLSVSLFTFFAWYFTRQAEERRRRAIQQAMEE TATDWQKGSPTPA" misc_feature 343280..344029 /gene="spuH" /locus_tag="PA0304" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2; cl00427" /db_xref="CDD:444901" misc_feature order(343481..343486,343493..343498,343511..343513, 343544..343555,343559..343588,343595..343600, 343604..343606,343682..343687,343694..343696, 343700..343702,343709..343714,343718..343720, 343730..343735,343742..343744,343793..343795, 343835..343840,343847..343849,343868..343879, 343886..343891,343928..343933,343961..343966, 343973..343978,343982..343987,343994..343999) /gene="spuH" /locus_tag="PA0304" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(343562..343606,343868..343885) /gene="spuH" /locus_tag="PA0304" /note="conserved gate region [active]" /db_xref="CDD:119394" misc_feature order(343604..343606,343667..343669,343886..343888, 343922..343924,343931..343933,343961..343963) /gene="spuH" /locus_tag="PA0304" /note="putative PBP binding loops [active]" /db_xref="CDD:119394" misc_feature order(343745..343783,343799..343804,343814..343816) /gene="spuH" /locus_tag="PA0304" /note="ABC-ATPase subunit interface [active]" /db_xref="CDD:119394" gene complement(344303..346690) /locus_tag="PA0305" /db_xref="GeneID:877593" CDS complement(344303..346690) /locus_tag="PA0305" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248996.1" /db_xref="GeneID:877593" /translation="MKRTLTVIAVAVAAAAAGGAWYLHAKQPLRNGSLALAHLQAPVD VRYDERGVPHLYAQNQTDLYRALGYVHAQDRLFQMEMLRRLARGELAEVLGPKLVDTD RLFRTLRIRDHAAEYSARQDKQSQPWKVLEAYLDGVNQFQENNPAPLEFDLLGIPRRP FTPEDTLSIAGYMAYSFAAAFRTEPVLTYIRDELGSDYLRIFDLDWHPQGVLTPSGAL GAGDWKDLGALARLSQQALEDAGLPQFEGSNAWVVAGSRTASGKPLLAGDPHIRFAAP AVWYEAQLSAPGFELYGHHQALNPFASLGHNRAFGWSLTMFQNDDLDLVAEKVNPDNP NQVWYQGEWVDLQSEEQEIAVKGAAPVKLTLRRSPHGPIVNDALGASSGKTPIAMWWA FLETENPVLDAFYQLNRADTLAKARAAASKIHSPGLNLVWANAAGDIGWWASAALPKR PEGVNPSFILDGSKGEADKSGFYPFADNPQEENPARGYIVSANFQPVPANGRPIPGYY NLADRGQWLDTQLADRGTKWNLDNSRALQLGNRTGYAPRLLAPLLPVLREVVDDAEGK RLVEQLAAWNGDYPVDSTAATLFNQLLFQIAEGALHDELGDAFFDSLIATRAIDSALP RLAGDADSPWWDDRRTERRETRADIVRTAWNASLAHLRGTLGNDPSGWLWGKAHTLTH EHALGQQALLRRLLNVGPFAAPGTHEVPNNLSAKIGPAPWAVTYGPSTRRLVDFADPT HSLGINPVGQSGVPFDGHYDDQAEAYIEGHYLPQHYEENEVKANSKGVLVLEPKR" misc_feature complement(344306..346630) /locus_tag="PA0305" /note="Acyl-homoserine lactone (AHL) acylase PvdQ [Secondary metabolites biosynthesis, transport and catabolism]; Region: PvdQ; COG2366" /db_xref="CDD:441933" gene 346801..347853 /locus_tag="PA0306" /db_xref="GeneID:877655" CDS 346801..347853 /locus_tag="PA0306" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_248997.1" /db_xref="GeneID:877655" /translation="MQDDPSTSPLTHSATLRRLLYEALDALGLDPTRVYRSVYRRIPL PPPTLGGRLVHDNAPLFWTELAAVTGDADIGLHLGEAMKPRLLDVVGYLLLSARDLEE ALRSFVRFQHILSGGFAARLEVEGETARLILDINYLGYASLRQQIECLMLLFLKLLAL ISDDEFVAERIEFRHRAPPRLGEHRRLFGRLPLFSRPHDALVFSAALLRRPSRNANPD MHDVLTRHAEEQSRELSENRLLNRVRYLIELRLGEGYGLRQCAAELGLGSGALQRALA AGGASFRQVRDEVRRQRASEMLLAGRAIREVAKACGFAELSPFYRAFRRWHAAPPEQY RARLAKREEGYSTSGT" misc_feature 346882..347433 /locus_tag="PA0306" /note="Arabinose-binding domain of AraC transcription regulator, N-term; Region: Arabinose_bd; pfam12625" /db_xref="CDD:432679" misc_feature 347074..347826 /locus_tag="PA0306" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" gene complement(347832..348335) /locus_tag="PA0306a" /db_xref="GeneID:17373339" CDS complement(347832..348335) /locus_tag="PA0306a" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="YP_008719731.1" /db_xref="GeneID:17373339" /translation="MSLRPTLALLALVSLPLMAAQNDPQPSSKELMKEHQAQIQNDLA DVDYKRKRIVEANMNLTDQEGEKFWPIYNTYRTESDKLSKETLKLLLDYAQAYNSGNV SDDQASKLIERVDDLQEDRLELRDKYVKRIAKNVSPKRAMRFLQIEIQLDAIATLEIG RQVPLVE" gene complement(348440..349051) /locus_tag="PA0307" /db_xref="GeneID:877629" CDS complement(348440..349051) /locus_tag="PA0307" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248998.1" /db_xref="GeneID:877629" /translation="MASLAPVFRVNAMTPRRKTLLVSLVGLLWAGGLLAAYWWFEIRY IRPFSEQTTLFSGDSLRLPAELAGPGAIRLVHFWDPACPCNVGNQQHLGELIERFAGK GVEFHVLQKPGSQGRLPDNLAALRALAGLPGSEQLPASPAVAIWDRDGRLAYFGPYSE GAVCTSSNSFIEPILEALLQGRPVDATHTLAVGCYCPWTPEKG" misc_feature complement(348464..348640) /locus_tag="PA0307" /note="Domain of unknown function (DUF6436); Region: DUF6436; pfam20029" /db_xref="CDD:437861" gene 349050..350069 /locus_tag="PA0308" /db_xref="GeneID:877780" CDS 349050..350069 /locus_tag="PA0308" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_248999.1" /db_xref="GeneID:877780" /translation="MCSRAAEYPWVSPVARPRIDCSPEPPMSEAFNPDYLRQHLRPLA AAEADAAVLAYQAYYGLDLRSRHPRLQARLGSMAVDGRRLAVQAWLLPEARGSLLLMH GYYDHMGLYRHVVDWALGMGFSVLACDLPGHGLSEGERASIRDFAEYQAVFKGLLGQA AELDLAAPWHLCGQSTGGAILLDYLLHGGERPELGETILLAPLVRPRAWGWSKLSYRL LSPFVDSIPRRFSENSSDPQFLDFLREHDPLQPRTLPTAWVGALTRWVPRIERAPRRA LSPLVVQGESDETVDWRHGLKVLREKFDEPRILLLEEARHHLANESEGLRRRYFDFLS DALGA" misc_feature 349281..350066 /locus_tag="PA0308" /note="Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism]; Region: PldB; COG2267" /db_xref="CDD:441868" gene complement(350089..350841) /locus_tag="PA0309" /db_xref="GeneID:878386" CDS complement(350089..350841) /locus_tag="PA0309" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249000.1" /db_xref="GeneID:878386" /translation="MRALLAFALLLVGLPALADPYQRLYQAAGWPDQRAHFSDALDAA QKRYQDKLPPALYQTLVDNSNRRFAPAEVDQRALNGLRENLPDSASPLNFFESPLGRK VVAAEVLATRRDQLLQHSNGLPRQTASEPRRALVKRLAQVLPAREAGAEVSLALAGVA ADSLSQMLPGLPGLLGGGQTGQLLEGQRQRLVQQIGADLENTLLYVYRDLSDAELTQY VNFAESPAGRSYYQAALAALKAGLAVDQAVAP" gene 350890..351588 /locus_tag="PA0310" /db_xref="GeneID:880668" CDS 350890..351588 /locus_tag="PA0310" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249001.1" /db_xref="GeneID:880668" /translation="MGRYCRHAADRLSRHRGGTLQWTMHINVNHPLLHRIVDELVDQG WSHQSIFMPERLTTRLAEECRTRAVAGDLTPAAIGRGDGQVIREGIRGDLTQWLEPGE SEACDEYLGVMDSLRQALNASLFLGLEDFECHFALYPPGAYYQKHVDRFRDDDARTVS AVLYLNDAWLPEHGGALRLHLPQRQVDIQPTGGSLVVFMSAGTEHEVLPASRDRLSLT GWFRRRNESLLQLS" misc_feature 350992..351561 /locus_tag="PA0310" /note="Proline 4-hydroxylase (includes Rps23 Pro-64 3,4-dihydroxylase Tpa1), contains SM-20 domain [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: EGL9; COG3751" /db_xref="CDD:442965" gene complement(351610..352164) /locus_tag="PA0311" /db_xref="GeneID:878303" CDS complement(351610..352164) /locus_tag="PA0311" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249002.1" /db_xref="GeneID:878303" /translation="MLPTRSLLPFFLAPALLASAASQAAMEALDNDSLSQVTGQAGIS LRLDLRAGAARVAWVDDGGSLSLRNLVIDNGCVKAGDCPDGRGGNIPLGAAQLGLSLP IFGVEQPTLALDVTTGSGGGQQLAISLPDLATINDQLIASGLPAQRIRLRVASDLYIG DNSIGRIELRDITDLRGTIKVWGH" misc_feature complement(<351736..352089) /locus_tag="PA0311" /note="Family of unknown function (DUF6160); Region: DUF6160; pfam19657" /db_xref="CDD:437489" gene 352430..352924 /locus_tag="PA0312" /db_xref="GeneID:878375" CDS 352430..352924 /locus_tag="PA0312" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249003.1" /db_xref="GeneID:878375" /translation="MQKVLVSRCLLGHLVRYDGGSHGPFDLLSRWHAQGRIVALCPEV AGGLPTPRPPAEIPGGQGGEVLDRLNRVFTVDGEDVSEAFLLGAEAAVELVRRHDIRM AVLKARSPSCGNLENYDGRFNGNRVAGEGVTAAALKRMGVLVFNEDELDRAAVCLAGL DAGG" misc_feature 352439..352876 /locus_tag="PA0312" /note="2-thiouracil desulfurase; Region: 2-thiour_desulf; pfam04463" /db_xref="CDD:461320" gene complement(352927..353619) /locus_tag="PA0313" /db_xref="GeneID:878278" CDS complement(352927..353619) /locus_tag="PA0313" /note="'class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene'" /codon_start=1 /transl_table=11 /product="L-cysteine ABC transporter protein YecS" /protein_id="NP_249004.1" /db_xref="GeneID:878278" /translation="MNSLQKLLEWLANLVELLGMAWPFLLQGAMYTVLFAAVSMVLGL ILGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGI LALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLS NSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAAGIYWLLSALFERVQK ALENRLTAPLRR" misc_feature complement(352939..353574) /locus_tag="PA0313" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" gene complement(353691..354461) /locus_tag="PA0314" /db_xref="GeneID:878270" CDS complement(353691..354461) /locus_tag="PA0314" /note="'class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene'" /codon_start=1 /transl_table=11 /product="L-cysteine ABC transporter protein FliY" /protein_id="NP_249005.1" /db_xref="GeneID:878270" /translation="MRFLPRLLMLVSLAAPLAHAELLDDVHQRGALRIALEGTYPPFN FKQGGKLTGFETELGELLAAELAVKPEFVTTEWSGILAGLQSGKYDIALNQVSVNEQR RKVFDFSEPYTISSAQLIVRADETRQFKSLEDLKGLKLGVGQGTNYADLAKSVAGVNV RTYPGAPEYLQDLASKRIDAALNDRLLIPFAIREAKLPVKPGAAVGPVANMAIPYRKN NPKFGEALNAALEKIKADGRFAKLSEKWFGLDVSQPPK" misc_feature complement(353718..354371) /locus_tag="PA0314" /note="Substrate binding domain of an Escherichia coli ABC transporter; the type 2 periplasmic binding protein fold; Region: PBP2_FliY; cd13712" /db_xref="CDD:270430" misc_feature complement(order(353913..353915,354018..354023, 354033..354035,354156..354158,354174..354182, 354231..354233,354342..354344,354351..354353)) /locus_tag="PA0314" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270430" gene 354754..355191 /locus_tag="PA0315" /db_xref="GeneID:878297" CDS 354754..355191 /locus_tag="PA0315" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249006.1" /db_xref="GeneID:878297" /translation="MRVTLPCLGLAALMFGASASLMAADLPRTKAPEGAKVYFITPAD GATVDKTFTVKFGLKGMGVAPAGVDMPDTGHHHLLVDLKEQPAMNLPLPMTDNIRHFG KGQTETEITLPPGKHTLQLLVGDKNHVPLEPTVESEKITVTVK" misc_feature 354913..355188 /locus_tag="PA0315" /note="Domain of unknown function (DUF4399); Region: DUF4399; pfam14347" /db_xref="CDD:433889" gene complement(355248..356477) /gene="serA" /locus_tag="PA0316" /db_xref="GeneID:878305" CDS complement(355248..356477) /gene="serA" /locus_tag="PA0316" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="D-3-phosphoglycerate dehydrogenase" /protein_id="NP_249007.1" /db_xref="GeneID:878305" /translation="MSKTSLDKSKIKFLLLEGVHQNAVDTLKAAGYTNIEYLKTALSG DELKERIADAHFIGIRSRTQLTEEVFDCAKKLIAVGCFCIGTNQVDLNAARERGIAVF NAPYSNTRSVAELVLAEAILLLRGIPEKNASCHRGGWIKSAANSFEIRGKKLGIVGYG SIGTQLSVLAEALGMQVFFYDTVTKLPLGNAVQIGSLHELLGMSDIVSLHVPELPSTQ WMIGEKEIRAMKKGGILINAARGTVVELDHLAAAIKDEHLIGAAIDVFPVEPKSNDEE FASPLRGLDRVILTPHIGGSTAEAQANIGLEVAEKLVKYSDNGTSVSSVNFPEVALPS HPGKHRLLHIHANIPGVMSEINKVFADNGINVSGQYLQTNEKVGYVVIDVDAEYSDLA LEKLQQVNGTIRSRVLF" misc_feature complement(355251..356477) /gene="serA" /locus_tag="PA0316" /note="phosphoglycerate dehydrogenase; Region: PRK11790" /db_xref="CDD:236985" misc_feature complement(order(356154..356156,356223..356231, 356295..356300)) /gene="serA" /locus_tag="PA0316" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:240653" misc_feature complement(order(355593..355598,355602..355604, 355686..355688,355758..355766,355818..355820, 355827..355832,355842..355850,355923..355925, 355932..355940,355992..356006,356142..356144, 356154..356156,356160..356162,356226..356228)) /gene="serA" /locus_tag="PA0316" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:240653" misc_feature complement(order(355575..355577,355581..355592, 355596..355619,355626..355628,355632..355637, 355647..355652,355659..355661,355668..355673, 355680..355682,355959..355964,356022..356024, 356028..356063,356067..356069,356073..356078, 356085..356090,356097..356099,356103..356105, 356112..356117,356121..356129,356133..356138, 356145..356150)) /gene="serA" /locus_tag="PA0316" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:240653" gene 356681..358075 /locus_tag="PA0317" /db_xref="GeneID:878323" CDS 356681..358075 /locus_tag="PA0317" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249008.1" /db_xref="GeneID:878323" /translation="MTREALIESLKPLVEPGKLLDDAASLDAYGKDWTKHFAPAPLAI VFPKSVEQVQAIVRWANQHKVGLVPSGGRTGLSAAAVAANGEVVVAFDYMNRILDFNA FDRTVVCQPGVVTKQLQTFAEENGLYYPVDFASSGSSQIGGNIGTNAGGIKVIRYGMT RNWVAGMKVVTGKGDLLELNKDLIKNATGYDMRQLFIGAEGTLGFVVEATMRLERTPK NLTAMVLGTPDFDSIMPVLHAFQSKLDLTAFEFFSDKALAKVLARGDVPRAFETDCPF YALLEFEATTEEVANEALATFEHCVEQGWVLDGVMSQSEQQLQNLWKLREYISETISH WTPYKNDISVTVSRVPAFLKDIDAIVEANYPDFEVVWFGHIGDGNLHLNILKPENLGK DEFFAKCATVNKWVFETVEKYNGSISAEHGVGMTKRDYLTYTRSETEIAYMKALKAVF DPNGIMNPGKIFAE" misc_feature 356681..358069 /locus_tag="PA0317" /note="FAD/FMN-containing lactate dehydrogenase/glycolate oxidase [Energy production and conversion]; Region: GlcD; COG0277" /db_xref="CDD:440046" gene 358167..358832 /locus_tag="PA0318" /db_xref="GeneID:878356" CDS 358167..358832 /locus_tag="PA0318" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249009.1" /db_xref="GeneID:878356" /translation="MSYQHQYIDGTPIHFPLGKLVCVGRNYAEHAKELNNPVPTEPLL FIKPGSCVVPVSGGLSLPQERGSVHYEAEIAVLIGKPLSRKPNREEVLDAISGYAPAL DLTLREVQAKLKEKGLPWELAKSFDGAGVLSPFVNADQFPDPTDIGIRLTINGEVRQD GNSRDMLNPIVPLIQHIAGHFSLQAGDVVLTGTPSGVGPLNSGDELLLELPGASRFET RVL" misc_feature 358173..358829 /locus_tag="PA0318" /note="Protein of unknown function (DUF2848); Region: DUF2848; cl11421" /db_xref="CDD:472178" gene 358931..359920 /locus_tag="PA0319" /db_xref="GeneID:878399" CDS 358931..359920 /locus_tag="PA0319" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249010.1" /db_xref="GeneID:878399" /translation="MPFHGDAQENTWPNSRASPMSLASKLPRFRWLLPAFVVLVGVVL TIVMHWDDRAGLWWKESQASQQQRDESIWLPGYRVVIDAKPLQGLEEEETSDLAYNPA TRTLFTVTGKRPLLVELSLTGDVLRTIPLLGLSNPEGVAVLENGNVAVTDERRNTLTI FHVDPQTAELSTKSLAEFPLGNIGKKNKGFEGIAWDPRQQRLLLSKERDPMTLFSWKS DGGPSLSGAMTALPSDDLYMRNVSALSVDPRTGHTLVLSAESHLLLELDEKGEPVSFI SLLGGFNGLDSKIPRAEGVAIDDEGTIYMVSEPNLFYVFRKKSGERLATSDAD" misc_feature 359138..359878 /locus_tag="PA0319" /note="Region: SdiA-regulated; pfam06977" /db_xref="CDD:429226" misc_feature order(359213..359215,359261..359263,359336..359338, 359342..359344,359501..359503,359654..359656, 359807..359809,359852..359854) /locus_tag="PA0319" /note="putative active site [active]" /db_xref="CDD:197380" gene 359982..360332 /locus_tag="PA0320" /db_xref="GeneID:878326" CDS 359982..360332 /locus_tag="PA0320" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249011.1" /db_xref="GeneID:878326" /translation="MKLRHLPLIAAIGLFSTVTLAAGYTGPGATPTTTTVKAALEAAD DTPVVLQGTIVKRIKGDIYEFRDATGSMKVEIDDEDFPPMEINDKTRVKLTGEVDRDL VGREIDVEFVEVIK" misc_feature <360087..360323 /locus_tag="PA0320" /note="This superfamily includes two oligonucleotide/oligosaccharide binding fold (OBF) domain families. One of these contains the OBF domains of the large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small (RPA3, 14 kDa) subunits of human heterotrimeric...; Region: Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.; cl09930" /db_xref="CDD:471953" gene complement(360413..361447) /locus_tag="PA0321" /db_xref="GeneID:878360" CDS complement(360413..361447) /locus_tag="PA0321" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetylpolyamine aminohydrolase" /protein_id="NP_249012.1" /db_xref="GeneID:878360" /translation="MLTIYSDDHRLHHGRHELIGGQFTPCFEKPSRADMVLDRVKAVG LGEVRAPRDFGLEPIRRVHSEGFVRFLQNAWQDWLATGRSHDMLPIAWPTRRLRQTEP DNIDGRLGYYSFDAGAPITAGTWQAITSSANVALSGQSELANGARSVFSLCRPPGHHA AADYMGGYCFFNNAAIAAQAFLDRGAGRVAILDVDYHHGNGTQDIFYDRADVLFTSIH GDPRFEYPYFLGYADEKGNGVGTGYNFNYPLAAGSDWATWSQALQAAIRQIQAYAADA LIVSLGVDTFKEDPISQFRLDSPDYLRMGEAIGKLGLATLFVMEGGYAVEEIGINAVN VLQGFEGVHR" misc_feature complement(360428..361444) /locus_tag="PA0321" /note="Histone deacetylase class IIa; Region: HDAC_classII_APAH; cd10001" /db_xref="CDD:212525" misc_feature complement(order(360485..360487,360596..360598, 360857..360859,360863..360865,360944..360949, 360971..360976)) /locus_tag="PA0321" /note="active site" /db_xref="CDD:212525" gene complement(361463..362857) /locus_tag="PA0322" /db_xref="GeneID:878353" CDS complement(361463..362857) /locus_tag="PA0322" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_249013.1" /db_xref="GeneID:878353" /translation="MASERNNGILIGGKRPEYVHSAQGTGLRRILGLPALVFFGLVYM VPLTMFTTYGVVTEITGGRTASAYLITLAAMLFTAFSYSFMVKKYPIAGSAYSYTSLS FGPCVGFLAGWSLLLDYLFLPMINYLLIGLFLNIAFPMVPAWVFVLAAIGLVTVLNVI GISSVAGMSNVIVGAQFVFAVVFVAMAVKHLAGIPSLDLSLPFVGDGSQPGFAPLMAG AAVLCLSFLGFDAVSTLAEETRDPQRDIPRAIVITTVGAGLLFTVLAVFSQLVFPGSV FQDAESAANEVMLAAGGKFLASFFTAAYVAGAAGSALASQASVSRILYSMGRDGILPR RVFGSLSERFKTPVIAILVVSVISLLAVVIDLTTLASMISFGALVAFSAVNLAVIRSY LLLDGRRAPRDLLRYGLVPAIGLGLTLWLWTSLSALTLVIGLTWFAAGLAYLALHTGG FRRKAPTVTFSEQN" misc_feature complement(361520..362797) /locus_tag="PA0322" /note="Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; Region: PotE; COG0531" /db_xref="CDD:440297" gene complement(363278..364321) /locus_tag="PA0323" /db_xref="GeneID:878380" CDS complement(363278..364321) /locus_tag="PA0323" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_249014.1" /db_xref="GeneID:878380" /translation="MTYRTPLTLLFAAGLALGGQARAEGTLHFANWSDYYPPELLKKF EKDTGIKATLDAYDSNETLLAKLKAGGGAYDVVVPSDSFIEIFVKEGLLQKLDKSQLP SLGNLKENFRTLGFDPGHDYSIPYLWGTTGYSYDTAKVPGGRLEESWKPFFEPPAELK GKVVALNSIEELFIPATYYLGIDECTEDAREAQKVLDLLLRQKPALAMYNSDGTIERM AAGEVAMHQQWNGAFHRAHAQRASLEYVYPKEGIRLFIDNFAIPRDASNVKEAHVFID WMMRPENIAAASNFAKYNNAIVGSEKFMEKALFDDPAINTPQDKLDRLKPFKLCSPKA LALRSKVWTKLKK" misc_feature complement(363296..364246) /locus_tag="PA0323" /note="TThe periplasmic substrate-binding component of an uncharacterized active transport system closely related to spermidine and putrescine transporters; contains the type 2 periplasmic binding fold; Region: PBP2_PotD_PotF_like_3; cd13664" /db_xref="CDD:270382" misc_feature complement(order(363443..363445,363551..363553, 363557..363559,363626..363628,363635..363637, 364226..364228)) /locus_tag="PA0323" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270382" gene complement(364369..365157) /locus_tag="PA0324" /db_xref="GeneID:879407" CDS complement(364369..365157) /locus_tag="PA0324" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_249015.1" /db_xref="GeneID:879407" /translation="MNGRNPLWTFSGVRQAAWLFFAFLYIPILVLVVLSFNSGQSATL WESFSLKWYAVVANDPEILRAAKNSLLVATLATLASTVLATLAALGMRGRAFRGQTLM NGVLGLPLLVPEIVTAVATLMFFSFIGLKLSLFTILIAHIVFCIPFAYLPIRARLEGL DPRLAEAAADLYASPWKAFWKITLPLLMPGVLSGAMLAFIISMDDFVITYFVAGAGAT TLPVYIFSSIRMGISPKINAISSIILMISIAFVALSYYLGQRRR" misc_feature complement(364372..365109) /locus_tag="PA0324" /note="ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]; Region: PotC; COG1177" /db_xref="CDD:440790" gene complement(365154..366083) /locus_tag="PA0325" /db_xref="GeneID:879238" CDS complement(365154..366083) /locus_tag="PA0325" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_249016.1" /db_xref="GeneID:879238" /translation="MSTAGRPTAQQSAERRQLRRRLLLSSPAMLMLVLFLVIPLGIMF AVSIQQSGDYGGVKWGQHSLEAYLNFLWERDLDDSLVFNADYLGIFQRSFWLSLLTTL GCLALGFPTALYLALQPERRRNLLLFLVTVPFWTNLLVRVYAWILLLRNGGLVDAGLQ GIGLTDTGLGLLYTDNAVIIGLLYTYLPFMVLPIYSSLEKMDWRLVEAAFDLGANRWK ALRRVIVPLAMPGIVAGCILVFIPALGSYIIPELLGGGKALMIGNLIQLQFGTAHNWP FGAALSFALLAFVLLAMLIYNLRFRANAGGGQP" misc_feature complement(365163..366011) /locus_tag="PA0325" /note="ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]; Region: PotB; COG1176" /db_xref="CDD:440789" gene complement(366080..367129) /locus_tag="PA0326" /db_xref="GeneID:880297" CDS complement(366080..367129) /locus_tag="PA0326" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_249017.1" /db_xref="GeneID:880297" /translation="MTSAIAIERICMEFGTPGQGLKALDDVSLDIHANEFFTLLGPSG CGKTTLLRLIAGFEQPSSGSIRLYGEHMEGLPPFRRPVNTVFQSYALFPHMSVADNIG FGLEMQGRPRSEIDATVSRMLDLVKLPEVGKRRADQLSGGQQQRIALARALASRPKVL LLDESLSALDLKLRKEMQIELKRLQHETGITFIFVTHDQEEALTMSDRIAVMSKGKVL QVGTPSDIYEAPLNRAVADFIGETNFLEGQADADGVRLADGQRLAATTPGSGAVTLAI RPERTELAADGQLEGVLENIVYVGTDTVYHLNVAGQPGFRVRQQNRDGARCPHSPGAK VRVRIPAAAIRVLAE" misc_feature complement(366083..367129) /locus_tag="PA0326" /note="ABC-type Fe3+/spermidine/putrescine transport systems, ATPase component [Amino acid transport and metabolism]; Region: PotA; COG3842" /db_xref="CDD:443052" gene 367457..368422 /locus_tag="PA0327" /db_xref="GeneID:879241" CDS 367457..368422 /locus_tag="PA0327" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249018.1" /db_xref="GeneID:879241" /translation="MTIHAQTPEPFSMSRAFTPRRLLLAVLLVALSALVLLGQSFRVF DRAWFAVQEWRHADAWKERSIWLPDYRVRIEAQPIEGLNDDVSALTFDPDRRTLFTVT NQPAQIIELSLQGKVLRTIPLTGFGDAEAIEYISRGVYVITDERQQRLVKVRLEDDTR FIDAADAQQLSLGIGLNGNKGFEGLAYDAEGKRLFVAKERDPVRIYEIHGFPHTQADK PFAVHVVDDPGRDKRLFVRDLSSLQFDEGTGHLLALSDESRLVVELDTDGEPVSTLSL LRGMHGLKRSVPQAEGVAMDDRGVLYLVSEPNLFYVFSKDEPAQP" misc_feature 367640..368398 /locus_tag="PA0327" /note="Region: SdiA-regulated; pfam06977" /db_xref="CDD:429226" misc_feature order(367715..367717,367763..367765,367838..367840, 367844..367846,368003..368005,368174..368176, 368327..368329,368372..368374) /locus_tag="PA0327" /note="putative active site [active]" /db_xref="CDD:197380" gene complement(368462..370405) /locus_tag="PA0328" /db_xref="GeneID:882183" CDS complement(368462..370405) /locus_tag="PA0328" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249019.1" /db_xref="GeneID:882183" /translation="MFKPLAVAVGLGCAALSLGANAYQYGEYAGETLERLITDYPGRY RGTASFAGASKLMQSRLGFGYQTSRQDFTWAGNRSSQNVIASAPGSSGKFLVLGAHYD TYYGRPTLQGLDDNASGAAVLTEIARNLGGIALENGLEVVGFGAEEEGLRGSRAYVES LDASQRANLLGMINLDSLVTGDKMYAHAGSNSVSNPALGAYREQILRIARELDIPLFT NPGLNAEYPAGTGCCSDGESFNGMDIPVLFIEATNWELGDLDGYEQTDNPAIPGGSTW HDPAEDNKEVLTNALGQERIEQRMRDFSRLLTRLVLEQTNADLLASTASGGALARQME DQLQRQHQALTRLHDRRWLTLLGSNRPVGSFDGEVGAEGEVSPDSGFDMPGNPESRRA GVHLLGDYRYSEALTLGGSLAFQRSRDKLDHGGRIEGDTWQLGLFGLYNDGGPEWLAG ELNLGHTRYDSKRSVYLQAAGGPVLLDQRLSGDTSAWSWGARLEGGYDFSFGELRSGP LAGLDYMHYRIDDFREDEALRTALGYEKQDYDSLEASLGWRLRGELALGARMRLQPYA SLRWVRELADGRLDDMDLTSRGDGRVRVADMGGVDKDFGRAQLGAQLAITEQLGVFAE ANSRFAHSEGNQAGYSLGVNWQF" misc_feature complement(368465..370405) /locus_tag="PA0328" /note="Uncharacterized conserved protein YhjY, contains autotransporter beta-barrel domain [General function prediction only]; Region: YhjY; COG5571" /db_xref="CDD:444313" gene complement(370706..371038) /locus_tag="PA0329" /db_xref="GeneID:882179" CDS complement(370706..371038) /locus_tag="PA0329" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249020.1" /db_xref="GeneID:882179" /translation="MAAKFHLKKAKDGQFHFNLHAANGEIILTSELYKAKDSALGGIE SVRKNSQRDGAFEVKPANNGKFHFVLKATNGQVVGQSQLYASQANAEAGVQSVKRATP EAGLSDES" misc_feature complement(370889..371035) /locus_tag="PA0329" /note="Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]; Region: YegP; COG3422" /db_xref="CDD:442648" misc_feature complement(370709..370879) /locus_tag="PA0329" /note="Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]; Region: YegP; COG3422" /db_xref="CDD:442648" gene complement(371162..371833) /gene="rpiA" /locus_tag="PA0330" /db_xref="GeneID:882171" CDS complement(371162..371833) /gene="rpiA" /locus_tag="PA0330" /EC_number="5.3.1.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribose-5-phosphate isomerase A" /protein_id="NP_249021.1" /db_xref="GeneID:882171" /translation="MNQDQLKQAVAQAAVDHILPHLDSKSIVGVGTGSTANFFIDALA RHKAEFDGAVASSEATAKRLKEHGIPVYELNTVSELEFYVDGADESNERLELIKGGGA ALTREKIVAAVAKTFICIADASKLVPILGQFPLPVEVIPMARSHVARQLVKLGGDPVY REGVLTDNGNIILDVHNLRIDSPVELEEKINAIVGVVTNGLFAARPADLLLLGTADGV KTLKA" misc_feature complement(371171..371833) /gene="rpiA" /locus_tag="PA0330" /note="ribose-5-phosphate isomerase RpiA; Region: PRK00702" /db_xref="CDD:234816" misc_feature complement(order(371321..371323,371333..371335, 371339..371341,371348..371353,371531..371536, 371615..371617,371621..371623,371648..371653, 371660..371662,371738..371740)) /gene="rpiA" /locus_tag="PA0330" /note="tetramer (dimer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:238692" misc_feature complement(order(371459..371461,371513..371515, 371531..371542,371570..371572,371576..371581, 371729..371734,371738..371740)) /gene="rpiA" /locus_tag="PA0330" /note="active site" /db_xref="CDD:238692" misc_feature complement(order(371243..371245,371258..371263, 371387..371389,371396..371404,371408..371413, 371495..371497,371516..371518,371600..371602, 371612..371614)) /gene="rpiA" /locus_tag="PA0330" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238692" protein_bind 371360..371372 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0329" /bound_moiety="AmrZ" gene 372091..373605 /gene="ilvA1" /locus_tag="PA0331" /db_xref="GeneID:879435" CDS 372091..373605 /gene="ilvA1" /locus_tag="PA0331" /EC_number="4.3.1.19" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="threonine dehydratase" /protein_id="NP_249022.1" /db_xref="GeneID:879435" /translation="MLEQYVKKILTSRVYDVAVETPLQPARQLSERLGNQVLLKREDL QPVFSFKIRGAYNKVAQLTEEEKARGVIAASAGNHAQGLALAAKRQGIRAVIVMPKTT PEIKVQAVRAHGAKAVLHGDAFPEALAHALKLVDEKGYTFVHPYDDPDTIAGQGTVAM EILRQQPGRLDAIFVPVGGGGLVAGIAAYVKYLRPEIKVIGVEPDESNCLQAAMAAGE RVVLGQVGLFADGVAVAQIGQHTFDICKDHVDEVITVSTDEICAAIKDIYDDTRSITE PAGALAVAGIKKYVERERAEGQTLVAIDSGANVNFDRLRHVAERAELGERREAIIAVT IPERPGSFKAFCEAVGKRQITEFNYRYHSGSEAHIFVGVQTHPENDPREALVAYLREK GFPVLDLTDNELAKLHIRHMVGGHAVKVSDEMVFRFEFPERPGALFNFLTKLGGRWNI SMFHYRNHGAADGRVVAGLQVPEDERHLIPQTLEAIGYPYWDETANPAYQLFLG" misc_feature 372091..373602 /gene="ilvA1" /locus_tag="PA0331" /note="threonine ammonia-lyase IlvA; Region: PRK09224" /db_xref="CDD:236417" gene 373725..374192 /locus_tag="PA0332" /db_xref="GeneID:879348" CDS 373725..374192 /locus_tag="PA0332" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249023.1" /db_xref="GeneID:879348" /translation="MEHFLQIKILHGVATVLLFGGLLGLAFYAWRSWRTGDAARVARG FKRVRLIGWPLLGLSLLALPVSGWWLVHLAGWPLGQSWLLFGACLYLLGCIFWLVLAG RLARVQHQAGAAETAGAALGEQTLREIKVGLVMALLGAASFIAVAVLMVSKPL" misc_feature 373743..374186 /locus_tag="PA0332" /note="Predicted integral membrane protein (DUF2269); Region: DUF2269; pfam10027" /db_xref="CDD:430998" gene 374243..375514 /locus_tag="PA0333" /db_xref="GeneID:882211" CDS 374243..375514 /locus_tag="PA0333" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249024.1" /db_xref="GeneID:882211" /translation="MRILLVGAGGFVGRHLLPALLAAGHELLLTARRPPVDAPAGVRW LALDLERLAERPDSFAWPAGVDLLINAAGTMSLDEASMARVQDSGARTLFDLAAAHGA KVLQISALGAGAHPDVAFLASKAAADRHLLELGIPALVLRPSLLLGPGGASSAWLERL SPLPLIPLLDNRARLQPLHVEDLVGAVLALLRCWPERAQVIPLVGPQALTQGELLDEL RRAQGWPRGRYVVPPAALLDALGGLGRRAGWRTLSPSMLKLVRHDNLADPALLDEACG YRCAPLASRLLGWPQAARSLAALMRPLMLAALVLIWLGTLVACLGPGYGWGLRILGEA GIHGWPASLAVIAGALLDGALGVGLLLRRWRRRALLAQFWLMLGYSLAISLILPHYWY DPYMAVGKNIVLMVATLWLLGDEPRTREARG" misc_feature 374243..375034 /locus_tag="PA0333" /note="A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous...; Region: Rossmann-fold NAD(P)(+)-binding proteins; cl21454" /db_xref="CDD:473865" misc_feature order(374261..374263,374267..374272,374276..374278, 374333..374341,374453..374461,374561..374569, 374600..374602,374612..374614,374669..374680) /locus_tag="PA0333" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature order(374498..374500,374567..374569,374600..374602, 374612..374614) /locus_tag="PA0333" /note="active site" /db_xref="CDD:187535" misc_feature 375161..375466 /locus_tag="PA0333" /note="DoxX-like family; Region: DoxX_3; pfam13781" /db_xref="CDD:463982" gene complement(375951..377189) /locus_tag="PA0334" /db_xref="GeneID:882199" CDS complement(375951..377189) /locus_tag="PA0334" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_249025.1" /db_xref="GeneID:882199" /translation="MPHTPAPGSLRPVVIVALVTALCLAGDSMLYIALPIYWHEVGLE ALWQVGVLLSINRLIRLPFNPLIGRLYKHLALKTGLLLAVVIGVLSTAGYGLASGFLA WVLLRGLWGIGWSFFRIGGLSAVVYCAADHQRGHAMGLYNGLYRLGSLVGMLLGGLLV PVLGLPALALSFALLALLGLPLLAKGFDLPENPAGHARTSAATASTSVARRPPPRGLV ILSGFATALLIQGVLAATLSALIARSFGTEVSLLGLALSAAGLSGIIQALRWSWEPWL AGRFGAWSDGPRGRRRFYVAALLVGAMGFGLLSSRLPILAWLAIALLVMLVATALTTL TDALAADVARAGDVVGFMTRYSIVQDLGAALGPALAFLLLERPGGFAWLYWGGSLAFL VLALLWLRRADPQTGLLTIR" misc_feature complement(375984..377144) /locus_tag="PA0334" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" misc_feature complement(order(376101..376103,376110..376115, 376122..376127,376134..376136,376182..376184, 376194..376196,376206..376211,376359..376361, 376401..376403,376485..376487,376494..376502, 376509..376514,376521..376523,376743..376745, 376752..376757,376764..376766,376824..376826, 376833..376841,376845..376850,376998..377000, 377097..377099,377106..377111,377118..377123)) /locus_tag="PA0334" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:349949" gene complement(377239..377892) /locus_tag="PA0335" /db_xref="GeneID:882191" CDS complement(377239..377892) /locus_tag="PA0335" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249026.1" /db_xref="GeneID:882191" /translation="MRLALFDLDNTLLAGDSDHSWGEWLCQRGLVDAAEYQARNDAFY ADYVAGKLDVLAYQAFTQAILGRTEMAQLETWHRQFMQEVIEPIVLAKGEALLAEHRA AGDRLVIITATNRFVTGPIAERLGVETLIATECEMRDGRYTGQTFDVPCFQGGKVVRL QRWLDENGLDLEGASFYSDSLNDLPLLEKVSRPVAVDPDPRLRAEAEKRGWPIISLR" misc_feature complement(377242..377892) /locus_tag="PA0335" /note="Phosphoserine phosphatase [Amino acid transport and metabolism]; Region: SerB; COG0560" /db_xref="CDD:440326" gene 378096..378575 /gene="ygdP" /locus_tag="PA0336" /db_xref="GeneID:882290" CDS 378096..378575 /gene="ygdP" /locus_tag="PA0336" /EC_number="3.6.1.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="RNA pyrophosphohydrolase" /protein_id="NP_249027.1" /db_xref="GeneID:882290" /translation="MIDSDGFRPNVGIILANEAGQVLWARRINQEAWQFPQGGINDRE TPEEALYRELNEEVGLEAGDVRILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLL RLMSDEARVRMDITSKPEFDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLARD" misc_feature 378096..378563 /gene="ygdP" /locus_tag="PA0336" /note="RNA pyrophosphohydrolase; Reviewed; Region: PRK00714" /db_xref="CDD:234820" gene 378598..380877 /gene="ptsP" /locus_tag="PA0337" /db_xref="GeneID:882232" CDS 378598..380877 /gene="ptsP" /locus_tag="PA0337" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate-protein phosphotransferase PtsP" /protein_id="NP_249028.1" /db_xref="GeneID:882232" /translation="MLNTLRKIVQEVNSAKDLKAALGIIVQRVKEAMGTQVCSVYLLD TETQRFVLMATEGLNKRSIGKVSMAPSEGLVGLVGTREEPLNLENAAAHPRYRYFAET GEERYASFLGAPIIHHRRVMGVLVVQQKERRQFDEGEEAFLVTMSAQLAGVIAHAEAT GSIRGLGKLGKGIQEAKFVGVPGAPGVGVGKAVVVLPPADLEVVPDKQVDDIDAEIAL FKQALEGVRADMRALSSKLASQLRKEERALFDVYLMMLDDASIGNEVKRIIRTGQWAQ GALRQVVMEHVQRFELMDDAYLRERASDVKDIGRRLLAYLQEERKQNLTYPEQTIIVS EELSPAMLGEVPEGRLVGLVSVLGSGNSHVAILARAMGIPTVMGAVDLPYSKVDGIDL IVDGYHGEVYTNPSAELVRQYSDVVAEERELSKGLAALRELPCETLDGHRMPLWVNTG LLADVARAQERGAEGVGLYRTEVPFMINDRFPSEKEQLAIYREQLSAFHPLPVTMRTL DIGGDKALSYFPIKEDNPFLGWRGIRVTLDHPEIFLVQTRAMLKASEGLDNLRILLPM ISGTHELEEALHLIHRAWGEVRDEGVDIAMPPIGMMVEIPAAVYQTRELARQVDFLSV GSNDLTQYLLAVDRNNPRVADLYDYLHPAVLHALKKVVDDAHLEGKPVSICGEMAGDP AAAVLLMAMGFDSLSMNATNLPKVKWLLRQITLDKARDLLGQLLTFDNPQVIHSSLHL ALRNLGLGRVINPAATVQP" misc_feature 378598..380850 /gene="ptsP" /locus_tag="PA0337" /note="phosphoenolpyruvate--protein phosphotransferase; Region: PRK11061" /db_xref="CDD:182937" gene 380903..382033 /locus_tag="PA0338" /db_xref="GeneID:882246" CDS 380903..382033 /locus_tag="PA0338" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249029.1" /db_xref="GeneID:882246" /translation="MRRLRFPRKRIDCLPFGRGHWPVERARDCRKMDERASKPPGLLP LSREDLEKTLRYALEIVSDGIWDWNIATNQVSRSAGWYLMLGYPPHSLPESVETWKSI IHPEDYPRVMASFQAYLDGESPEYCEEYRCRTYSGDYLWISDRGRFVEFDERGEPRRM IGAHHEIHQRKLVELELQQRNEELFDWNLRLEELVAERTEALHRVNQALASKMAEAQR LSEIDPLTELYNRRKFEQCLHHEWMRRQRHGRATALVMIDVDHFKRINDLFGHSTGDR VLVAFGRLVASELREVDVLARWGGEEFILLLPETGLEAAAALAERLRQRVRSQSFEMG ERLTASFGVGVLNDGETLDLLLCRVDDALYRAKQRRDCVACC" misc_feature 381122..381394 /locus_tag="PA0338" /note="PAS fold; Region: PAS_3; pfam08447" /db_xref="CDD:430001" misc_feature order(381125..381127,381137..381139,381161..381163, 381206..381217,381296..381298,381311..381313) /locus_tag="PA0338" /note="putative active site [active]" /db_xref="CDD:238075" misc_feature order(381197..381199,381209..381211,381233..381235, 381242..381247,381335..381337,381341..381343) /locus_tag="PA0338" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:238075" misc_feature 381374..382027 /locus_tag="PA0338" /note="GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants [Signal transduction mechanisms]; Region: GGDEF; COG2199" /db_xref="CDD:441801" protein_bind complement(381724..381736) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0338" /bound_moiety="AmrZ" protein_bind 381752..381764 /locus_tag="PA0338" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0338" /bound_moiety="AmrZ" gene complement(382037..382792) /locus_tag="PA0339" /db_xref="GeneID:882266" CDS complement(382037..382792) /locus_tag="PA0339" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249030.1" /db_xref="GeneID:882266" /translation="MCLIVFAWQPGHALPLLVAANRDEFYARPSLPLAAWEDAEGVFA GRDLEAGGTWLGLGPAGRFAALTNVRDPSQALGKRSRGELVADFLRGGGNPADYLAQV AGRAADYSGFNLLIGDRHQLWHYNPRVGPPRLLPAGIYGLSNAALDTPWPKLLKARAA LAERLAEPHPQALLELLADAAPAADGQLPDTGVGLATERLLSSVFIASPSYGTRASSV VRVHADGTREMIERSFGPSGARLGEVSLVLPPG" misc_feature complement(382055..382792) /locus_tag="PA0339" /note="Uncharacterized stress-responsive protein, TANGO2 (Transport and Golgi organisation 2) family, contains NRDE motif [General function prediction only]; Region: Tango2; COG3332" /db_xref="CDD:442561" protein_bind 382541..382553 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 382914..383717 /locus_tag="PA0340" /db_xref="GeneID:883093" CDS 382914..383717 /locus_tag="PA0340" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249031.1" /db_xref="GeneID:883093" /translation="MEFLLYIVLGACAGVLAGLFGVGGGLIIVPALVFSFTAHGFGGD VLTQMAVGTSLATIVFTSINSILEHHRRGAVRWPVFAWMTLGILIGSALGALTAAQIK GPLLQKIIGVFAILVALQMVLDLKPKGSREVPGKGGLTLAGAVIGWASAIFGIGGGSL TVPFLSWRSVPMQQAVATSSACGLPIAISGALSFIAVGWHNPQLPEWSLGYVYLPALV GIAATSMLFARFGARLAHRLSPRVLKRLFALLLFSVGISFLTPDLAFLS" misc_feature 382914..383690 /locus_tag="PA0340" /note="Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family [Inorganic ion transport and metabolism]; Region: TauE; COG0730" /db_xref="CDD:440494" gene 383727..384527 /gene="lgt" /locus_tag="PA0341" /db_xref="GeneID:882221" CDS 383727..384527 /gene="lgt" /locus_tag="PA0341" /EC_number="2.4.99.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="prolipoprotein diacylglyceryl transferase" /protein_id="NP_249032.1" /db_xref="GeneID:882221" /translation="MLTYPQIDPVALAIGPLKIHWYGLMYLIGIGGAWLLASRRMKRF DPTWTKERLSDLVFWVACGVILGGRLGYVLFYNLDEYIANPTLIFEVWKGGMSFHGGL LGVMLAVWWFGKRHGKSFFQLMDFIAPLVPIGLGAGRIGNFINSELWGKVSDVPWAMV FPNGGPLPRHPSQLYQFALEGVALFVILWLFTRKPRPTASVSGLFVLCYGIFRFVVEF VRVPDAQLGYLAWGWLTMGQVLCVPMVLAGIALMVWAYRRDAAQPKAA" misc_feature 383727..384524 /gene="lgt" /locus_tag="PA0341" /note="prolipoprotein diacylglyceryl transferase; Reviewed; Region: PRK00052" /db_xref="CDD:234599" gene 384733..385527 /gene="thyA" /locus_tag="PA0342" /db_xref="GeneID:879417" CDS 384733..385527 /gene="thyA" /locus_tag="PA0342" /EC_number="2.1.1.45" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="thymidylate synthase" /protein_id="NP_249033.1" /db_xref="GeneID:879417" /translation="MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGHQMRFDLAAGFPL VTTKKCHLKSIVHELLWFLKGSTNIAYLKEHGVSIWDEWADENGDLGPVYGYQWRSWP APDGRHIDQIANLMAMLKKNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLS CQLYQRSADIFLGVPFNIASYALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADL QLTREPLPLPSMKLNPEVKDLFDFRFEDFELVGYEAHPHIKAPVAV" misc_feature 384733..385524 /gene="thyA" /locus_tag="PA0342" /note="Thymidylate synthase [Nucleotide transport and metabolism]; Region: ThyA; COG0207" /db_xref="CDD:439977" gene complement(385554..386351) /locus_tag="PA0343" /db_xref="GeneID:880294" CDS complement(385554..386351) /locus_tag="PA0343" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249034.1" /db_xref="GeneID:880294" /translation="MPFVSYAQNLEDVRLWRALKLFPRGFYIDVGANHPRIDSVTLAF YERGWRGINIEPLPHLHRELERERPEDLNLNLAIGEREGRATLYEMAASGLSTLDPEL ARQRQAEGCTATPREVKVSTLDAICAAHVEGPIHFLKIDVEGLEGAVLRGLDLNRWRP WLILAETPFDHDPEWKAPLLAAGYRFVHFDGLNGYYLAEEQARLEGAFALPPNLLDDF QLCHGHAMSHPVAPLEQALEQALQRAEDAERALRDWRALPWYRRLFG" misc_feature complement(385860..386276) /locus_tag="PA0343" /note="methyltransferase, FkbM family; Region: fkbM_fam; TIGR01444" /db_xref="CDD:273628" gene complement(386386..387765) /locus_tag="PA0344" /db_xref="GeneID:879284" CDS complement(386386..387765) /locus_tag="PA0344" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249035.1" /db_xref="GeneID:879284" /translation="MTEPLILAVVGHTNTGKTSLLRTLTRDRGFGEVSHRPSTTRHVE GARLSVDGEALLELYDTPGLEDAIALLDYLDALERPGERLDGPERMARLLDSNEARGR FEQEAKVVRQLLASDAGLYVIDAREPVLAKYRDELAVLTGCGRPLLPVLNFVASPQHR EEEWRAALARLGLHALVRFDSVAPPLDGERRLYESLALLLERARPQLDRLIADHETQA AARLRAGQRLIAELLVDVAACRRLVPGGESAVQEATRDLHQQVRKREQACVEALLRLY AFARDDARAADLPLLDGRWGDDLFNPETLRQLGIRLGGGVAAGAAAGAGIDLLVGGVT LGAAAALGALAGGAWQTVGHYGSRLLGKLKGARELTVNDAVLRLLALRQRQLLAALQT RGHAAVEAIRLETPEDKQWREGKLPEALRKARAHPEWSSLNGRRVGGSDRQEQIDALA ELLESGRGE" misc_feature complement(387310..387744) /locus_tag="PA0344" /note="50S ribosome-binding GTPase; Region: MMR_HSR1; pfam01926" /db_xref="CDD:460387" misc_feature complement(386416..387270) /locus_tag="PA0344" /note="Domain of unknown function (DUF3482); Region: DUF3482; pfam11981" /db_xref="CDD:432236" gene complement(387758..389143) /locus_tag="PA0345" /db_xref="GeneID:879415" CDS complement(387758..389143) /locus_tag="PA0345" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249036.1" /db_xref="GeneID:879415" /translation="MSHTTHPGLDALWLTEAVRLREEQAGPLEDSEAVRQALAQGGSL PRRILTRAHWLGRREGLLDALRTWRQGSRLALALLLVLALASGAGLAFAALGDGQRPV NVFWALASLLGLHLLTLLGWALGLLAGGEAAGALGRLWLWLSGKLARDARAAHLAPAL LVLLGRRRLARWGLGALVHGLWLLGLLTALAMLLGLLATRRYGFVWETTILGSDTFIA LTQALGALPALLGFPLPDAELIRASGDAALASEAARHAWAGWLVGVLLVYGVLPRALL GLLCLWRWKRGLAHLDLDLDDPGYSLLRERLMPASERLGVSDAAPDWLPEPQGGQSGQ EAAGAVLVAVELDDRRPWPPKLAEGVADAGILDDGQQRRRLLEQLTRYPPARLAIACD PRRSPDRGTLALLGELARCAASTRIWLLQAPPGEALDSDRLGDWHAALERLQLPHGET SPLAWLETGHD" misc_feature complement(387809..388705) /locus_tag="PA0345" /note="Protein of unknown function (DUF2868); Region: DUF2868; pfam11067" /db_xref="CDD:431634" gene 389334..389696 /locus_tag="PA0346" /db_xref="GeneID:879318" CDS 389334..389696 /locus_tag="PA0346" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249037.1" /db_xref="GeneID:879318" /translation="MKVVRRYPLALLLGMAGALADELPDGSLLQRYGVQADQLPTLAA DPPSRKEEKETPSRFRVEPEQPLVTFGVKDHKGMEPTGNPSIDAMHERDRRICRNIRR QALEKGKAQPFDGYIECP" gene complement(389733..390884) /gene="glpQ" /locus_tag="PA0347" /db_xref="GeneID:879329" CDS complement(389733..390884) /gene="glpQ" /locus_tag="PA0347" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycerophosphoryl diester phosphodiesterase" /protein_id="NP_249038.1" /db_xref="GeneID:879329" /translation="MQPAFLRRHLGAACLMLAAGLASAAHADTGNVQRAIDWAQGQAS VRHPASDERSPLVIAHRGASGYVPEHTLGAYALAVMMGADYVEPDLVMTRDGKLVARH DNELGLTTDVAQHPEFADRKRTQKVDGVELTGWFSEDFTLAELKTLRAIERIPTIRPG NARLDGTFEIPTLQEIIDLVKSLQISQQRTIGLYPEIKHGTHFQRLGLAMERPLVKTL HRNGYLGPRAPVFIQSFEVNNLKELKRLTGIRLVQLYGSGQPYDQQAAGGSLTYAEMA TAKGLRQVARYAYGVGPDKSYVIPRDANGNLGQPTRFVGDAHAAGLKVHPYTFRAENS FLPAEFRSADGNPQSRGDLAGEIRAYLDAGIDGLFSDQPDVAVRLREQR" misc_feature complement(389766..390722) /gene="glpQ" /locus_tag="PA0347" /note="Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins; Region: GDPD_ScGlpQ1_like; cd08602" /db_xref="CDD:176544" misc_feature complement(order(389904..389906,390186..390188, 390297..390299,390579..390581,390618..390620, 390624..390626,390705..390707)) /gene="glpQ" /locus_tag="PA0347" /note="putative active site [active]" /db_xref="CDD:176544" misc_feature complement(order(390579..390581,390705..390707)) /gene="glpQ" /locus_tag="PA0347" /note="catalytic site [active]" /db_xref="CDD:176544" misc_feature complement(order(390297..390299,390618..390620, 390624..390626)) /gene="glpQ" /locus_tag="PA0347" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:176544" gene 391094..392188 /locus_tag="PA0348" /db_xref="GeneID:879397" CDS 391094..392188 /locus_tag="PA0348" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249039.1" /db_xref="GeneID:879397" /translation="MASAQPASAFPCLSLQLACLLLGAWLAFDAHGGGQAVAPPARVE ARVPTAATDDWGRQPDSLMSAVPPRTLEASVGARGSGSASSRLWIADTDFRLHDDIGF FIQRMLIRMEPTRPGAPLSLDDPTAMVARIQAGEIFVSDATLATLLNQDLAASRAAVR NLSMNTRKDGQEVRGELLRKGRWRPLRMLTEIELSGPLEVTLVPRRIFVDGVEVTSSL AAASIEMSEVLKLKTRHMELVGNRIRVDLDGLFPPPRLDFRVSRLALADGGMQLALGD SLADLQWPALRAPDSYMFIEGGDIKMARTVLVKAYALFTSLSPGQPLLFNLYDYRRQL QNGVIRLREDGMVQIAVSPVKAPAPLEARL" gene 392185..393225 /locus_tag="PA0349" /db_xref="GeneID:879281" CDS 392185..393225 /locus_tag="PA0349" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249040.1" /db_xref="GeneID:879281" /translation="MSRRPWGVLLGCCLLAASAAQAESAIDRQQRELALLREGWYRQV PPAPVPLPMRTAGPADSGQDGVGILLRNVDMYLRGNIGFHVPEVKGWLVPNRAGQPVD FDRPQDMHFQVMEGEVLLSPRQLANLFNEHILAYDGTMLKDFRMSSAAGRLEVEGRVR PLGVGPWLPLRLGGGVEVDAASGALVYRPDQLRVIGLPLYGAMSLVGLPMSALVSLDR PGASLVGSAMRLDYRKVFPLLGIDGHVQEAWLDDQGLHLRFSQAPGQPSPVFSPPAAA GPSFLWLQSGDLKIFEILITYAQVLLKTETPDQVLTFNLQDYRKVLATGTTQVNEDGT FFMQVPPYANPL" gene 393308..393814 /gene="folA" /locus_tag="PA0350" /db_xref="GeneID:879233" CDS 393308..393814 /gene="folA" /locus_tag="PA0350" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="dihydrofolate reductase" /protein_id="NP_249041.1" /db_xref="GeneID:879233" /translation="MARPLAMIAALGENRAIGIDNRLPWRLPADLKHFKAMTLGKPVI MGRKTWDSLGRPLPGRLNLVVSRQAGLALEGAEVFASLDAALARAEAWAQAEDADELM LIGGAQLYAEALPRAARLYLTRVGLAPEGDAFFPEIDGAAWRLASSIEHAAADDAPAY AFEVWERR" misc_feature 393320..393808 /gene="folA" /locus_tag="PA0350" /note="Dihydrofolate reductase; Region: DHFR_1; pfam00186" /db_xref="CDD:425512" misc_feature order(393329..393331,393380..393382,393395..393397, 393485..393487,393617..393619,393635..393637, 393674..393676) /gene="folA" /locus_tag="PA0350" /note="folate binding site [chemical binding]; other site" /db_xref="CDD:238127" misc_feature order(393335..393337,393356..393358,393446..393454, 393506..393508,393620..393631) /gene="folA" /locus_tag="PA0350" /note="NADP+ binding site [chemical binding]; other site" /db_xref="CDD:238127" gene complement(393830..394303) /locus_tag="PA0351" /db_xref="GeneID:879375" CDS complement(393830..394303) /locus_tag="PA0351" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249042.1" /db_xref="GeneID:879375" /translation="MPQSRRPLRIGLIADTHGLLRPEALERLRGCDQLIHAGDIGKPE ILAELERLAPLSVVRGNNDTQDWAADIPERLLLKIGRLTLYVLHDLKRLDLDPAAEGI DVVVAGHSHKPLKEERDGVLYLNPGSAGPRRFSLPIGIGVLEVAGKKIEAELITL" misc_feature complement(393869..394279) /locus_tag="PA0351" /note="Calcineurin-like phosphoesterase superfamily domain; Region: Metallophos_2; pfam12850" /db_xref="CDD:432832" misc_feature complement(order(393977..393979,394040..394042, 394118..394123,394187..394189,394253..394255, 394259..394261)) /locus_tag="PA0351" /note="active site" /db_xref="CDD:277317" misc_feature complement(order(393977..393979,394040..394042, 394121..394123,394187..394189,394253..394255, 394259..394261)) /locus_tag="PA0351" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:277317" gene complement(394442..395827) /locus_tag="PA0352" /db_xref="GeneID:879278" CDS complement(394442..395827) /locus_tag="PA0352" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_249043.1" /db_xref="GeneID:879278" /translation="MSSLQSPSDASARNDLVYGLDDRPSAPIALLAALQHLLAIIVPI VTPGLLICQALGVSPRDTNLIVSMSLVISGIATFVQCKRFGPFGAGLLIVQGTSFNFV GPLIAGGALMVKQGTPVESVMAAIFGVVIAGSFVEMGISRILPFVKRLITPLVTGIVV LMIGLTLIKVGLISMGGGFSAMSNGTFANGENLLLSGVVLGIIVVLNRIPVVWMRSCA IVIALAVGYALAGYLGRLDFTGMHQAELFQVPTPLHFGLDFSWPLFIPMLVIYLVTSL EAIGDVTATSKVSKQPVEGPLWMQRIKGGVLVNGANSFLAGIFNTFPSSVFAQNNGVI QLTGVASRYVGLWIAAMLVLLGLFPSVAGVIQAVPEPVLGGAAMVMFGAVAASGINIL AGIQLDRRALLIIAVSLALGLGVSQVPEFLAHMPAALRNVLESGVATGGICALLLNWF LPESPVQKAGH" misc_feature complement(394472..395710) /locus_tag="PA0352" /note="xanthine permease; Region: pbuX; TIGR03173" /db_xref="CDD:274468" gene complement(396057..397895) /gene="ilvD" /locus_tag="PA0353" /db_xref="GeneID:879274" CDS complement(396057..397895) /gene="ilvD" /locus_tag="PA0353" /EC_number="4.2.1.9" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="dihydroxy-acid dehydratase" /protein_id="NP_249044.1" /db_xref="GeneID:879274" /translation="MPDYRSKTSTHGRNMAGARALWRATGMKDEDFKKPIIAIANSFT QFVPGHVHLKDLGQLVAREIEKAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSREIIAD SVEYMVNAHCADAIVCISNCDKITPGMLMAALRLNIPVVFVSGGPMEAGKTKLASHGL DLVDAMVVAADDSCSDEKVAEYERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGS TLATHADREQLFLRAGRLAVELCQRYYGEGDDSVLPRNIANFKAFENAMTLDIAMGGS TNTILHLLAAAQEAEVPFDLRDIDRLSRKVPQLCKVAPNIQKYHMEDVHRAGGIFSIL GELARGGLLHTDVPTVHSPSMADAIAQWDITQTRDEAVHTFFKAGPAGIPTQTAFSQN TRWPSLDDDRAEGCIRSVEHAYSKEGGLAVLYGNIALDGCVVKTAGVDESIHVFEGSA KIFESQDAAVKGILGDEVKAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLGKQCAL LTDGRFSGGTSGLSIGHASPEAAAGGAIGLVQDGDKVLIDIPNRSINLLVSDEELAAR RAEQDKKGWKPAAPRARRVSTALKAYALLATSADKGAVRNKALLDG" misc_feature complement(396060..397892) /gene="ilvD" /locus_tag="PA0353" /note="dihydroxy-acid dehydratase; Provisional; Region: PRK12448" /db_xref="CDD:237104" gene complement(398224..399420) /locus_tag="PA0354" /db_xref="GeneID:879450" CDS complement(398224..399420) /locus_tag="PA0354" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249045.1" /db_xref="GeneID:879450" /translation="MTLPSLRLKANAERRLRAGHLWVYSNEVDVAATPLNAFAAGDQA VLEMANGKPLGIVALSPNNLICGRLISRDTKHVLDKSLLVHRINIALSLRERLFDKPF YRLVYGDSDLLPGLVVDRFGDVLVVQLASAAMELRKDEVLAALLQVLKPAAVLWKNDS SARDAEGLERYVANAYGEVPEWVALEENGVKFEAPVLAGQKTGWFYDHRMNRARLAPY VQGKRVLDLFSYIGGWGIQAAAFGASEVMCVDASAFALDGVERNAALNGVAEKVACVE GDVFEALRELKAADERFDVVIADPPAFIKRKKDLKNGEAAYRRLNEQAMRLLSKDGIL VSASCSMHLPEDDLQNILIGSARHLDRNIQLLERGGQGPDHPVHLAIAETRYIKSLTC RLLPNG" misc_feature complement(398233..399408) /locus_tag="PA0354" /note="23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI [Translation, ribosomal structure and biogenesis]; Region: RlmK; COG1092" /db_xref="CDD:440709" gene complement(399493..400032) /gene="pfpI" /locus_tag="PA0355" /db_xref="GeneID:879351" CDS complement(399493..400032) /gene="pfpI" /locus_tag="PA0355" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="protease PfpI" /protein_id="NP_249046.1" /db_xref="GeneID:879351" /translation="MTQSLHGKVVAALVTDGFEQVELTGPKKALEDAGATVRILSDKA GEVRGWNHHQPAEAFRVDGTFEDASLDDYDALLLPGGVINSDQIRSLAKAQELAIRAE QASKPVAVICHGAWLLISAGLVQGRTLTSWPSLKDDINNAGGHWVDQEVAVDGKLVSS RKPEDIPAFNRRFIEILAG" misc_feature complement(399508..400005) /gene="pfpI" /locus_tag="PA0355" /note="A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus; Region: GATase1_PfpI_like; cd03134" /db_xref="CDD:153228" misc_feature complement(399694..399699) /gene="pfpI" /locus_tag="PA0355" /note="proposed catalytic triad [active]" /db_xref="CDD:153228" misc_feature complement(399697..399699) /gene="pfpI" /locus_tag="PA0355" /note="conserved cys residue [active]" /db_xref="CDD:153228" gene 400248..401072 /locus_tag="PA0356" /db_xref="GeneID:879235" CDS 400248..401072 /locus_tag="PA0356" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249047.1" /db_xref="GeneID:879235" /translation="MPPQPQIMVDLQMEQVMPNPDLKNIARLISQDPGLSGALLKLVN SPFFGLANRITSIQRAVNLLGSRSVINLINAQSIKGEMSDDTIVTLNRFWDTAQDVAM SCLSLAKRIGYESVDEAYALGLFHNCGIPLMLKRFPHYMAVLEEAYAAASDERRVVDT ENRVLNTNHAVVGYYTARSWRLPEHVCEAIANHHNALSIFGDESARDTQLKNLLAILK MAEHICGSHRVLGNQPEDHEWNSIGALVLDYVGLTDYDFENLKGSILELGVGQGSY" misc_feature 400248..400994 /locus_tag="PA0356" /note="HD-like signal output (HDOD) domain, no enzymatic activity [Signal transduction mechanisms]; Region: HDOD; COG1639" /db_xref="CDD:441246" gene 401131..401943 /gene="mutM" /locus_tag="PA0357" /db_xref="GeneID:879307" CDS 401131..401943 /gene="mutM" /locus_tag="PA0357" /EC_number="3.2.2.23" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="formamidopyrimidine-DNA glycosylase" /protein_id="NP_249048.1" /db_xref="GeneID:879307" /translation="MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVR LSGQRIVSVERRAKYLLLGAEAGTLISHLGMSGSLRLVESGTPASRHEHVDIELASGM ALRYTDPRRFGAMLWSLAPLEHELLRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIM DNAVVVGVGNIYASEALFAAGIDPRKPAGSISKARYLRLAEEIKRILAIAIERGGTTL RDFVGGDGQPGYFQQELFVYGRGGEFCKVCGSTLREIRLGQRASVYCPRCQR" misc_feature 401131..401940 /gene="mutM" /locus_tag="PA0357" /note="bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase; Region: PRK01103" /db_xref="CDD:234899" gene 402020..402598 /locus_tag="PA0358" /db_xref="GeneID:879453" CDS 402020..402598 /locus_tag="PA0358" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249049.1" /db_xref="GeneID:879453" /translation="MSGNYLPRNTLVESLGHAMLKLSGWKIEGQLPALDKFVVIGAHH TSNWDFVAFLAAKFVLRLNARWFGKHTLFNGPLGGLMRRWGGIPIQRHLKLNTVDQAI QAFREHREFMLIIAPEGTRKKVDRWRMGFYHIARGAGVPVVPAALDYENRRIVIGEPF WPTGNEDADLCSLIGFYRPFIPKKPHYAFLGD" misc_feature 402065..402553 /locus_tag="PA0358" /note="Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168; Region: LPLAT_ABO13168-like; cd07988" /db_xref="CDD:153250" misc_feature order(402149..402151,402158..402160,402164..402166, 402221..402232,402374..402382) /locus_tag="PA0358" /note="putative acyl-acceptor binding pocket [active]" /db_xref="CDD:153250" gene 402681..403025 /locus_tag="PA0359" /db_xref="GeneID:879498" CDS 402681..403025 /locus_tag="PA0359" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249050.1" /db_xref="GeneID:879498" /translation="MNLFRTTALVLALTTGLSSMPALADAVQENASGDPMYTVEAPPA YAMIGDLLIARPFLIAATAVGAVAFVVSLPFTAASGSVGKAGQALVVDPGKEAFVRCL GCTTSGYNHDES" gene 403295..404281 /locus_tag="PA0360" /db_xref="GeneID:879422" CDS 403295..404281 /locus_tag="PA0360" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249051.1" /db_xref="GeneID:879422" /translation="MFSQWVFLSVLALAVPSFAWAEDAVSDLAREQSKAEQGDKRGDE LFAEFTRLRQAAETGEPQALFDFGAYFYQQQNYASAREWWGKAAAAGMVRAQIQLAML YRDGDGGPQDKTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAGTWFERAA ASGSEDAETNLGWFYLDDSQGVYSATSDEEAALLDRYAGSREKAFQWFCKAATQGDAR AQFKVGEAYWNGSGAGMNKLQARLWLEKAAQQQDADAIAWLESAANAAWYTRLENWIH AALDGELSGVADCSGAADRRHSGRGMEGAPSDPEAVEASAEDAQQAVEAASQ" misc_feature 403316..404044 /locus_tag="PA0360" /note="TPR repeat [General function prediction only]; Region: TPR; COG0790" /db_xref="CDD:440553" misc_feature 403520..403609 /locus_tag="PA0360" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" misc_feature 403628..403717 /locus_tag="PA0360" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" gene complement(404386..406119) /locus_tag="PA0361" /db_xref="GeneID:879505" CDS complement(404386..406119) /locus_tag="PA0361" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="gamma-glutamyltranspeptidase" /protein_id="NP_249052.1" /db_xref="GeneID:879505" /translation="MSFLNLPVRTLVAACGLSLLSLAAHADSFRGDAHAPQQAAVATP HPAATVAGLETLANGGNAFDAAAAIAAALAVAEPYGSGLGGGGFFLLRQAGAQPTYRF LDARERAPKAAYADMYRRNGKVDPRLSVDGPLAAAIPGLPAALVELSSRYGRKPLADN LVPAIRLAVDGVSVDRIYRDRAAMRLEAMRKDPETARIFLDKGGIPDEWNLLRQPQLA RTLERLGRYGRIGFYEGETADKLLTGVRAGGGIWSAADLRDYRVIERRPLEVKLANGR ELISAPPPSAGGVALAQSLQMLEQLPWQKAEPVQRAHYVLEVLRRAYRDRGLLGDPDF VANPLPSLLAPDYLKRLAAGIDPRRATPSSALPEAPAWREGDHTTHFAVIDAQGNAVA ATLSVNLPFGAAFTVPDTGVVLNNEMDDFAADTQGANSYGLAGSQANAVAAGKRPLSS MSPSFLESPTDFAAFGTPGGSRIPSMVLISMLQYFDGRPVGQWVAAPRYHHQYKPDVV EYEPRAFSDAEAAELRRRGYQLKRLERSYGNQQVLYWDKRSGRVDAASDPRGIGYSSL SLEAQAQPRPH" misc_feature complement(404434..405828) /locus_tag="PA0361" /note="Gamma-glutamyltranspeptidase; Region: G_glu_transpept; pfam01019" /db_xref="CDD:425991" gene complement(406247..406498) /gene="fdx1" /locus_tag="PA0362" /db_xref="GeneID:879523" CDS complement(406247..406498) /gene="fdx1" /locus_tag="PA0362" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin" /protein_id="NP_249053.1" /db_xref="GeneID:879523" /translation="MSLKITDDCINCDVCEPECPNGAISQGEEIYVIDPNLCTECVGH YDEPQCQQVCPVDCIPLDDANVESKDQLMEKYRKITGKA" misc_feature complement(406262..406498) /gene="fdx1" /locus_tag="PA0362" /note="YfhL family 4Fe-4S dicluster ferredoxin; Region: di_4Fe-4S_YfhL; NF033683" /db_xref="CDD:468141" gene complement(406619..407098) /gene="coaD" /locus_tag="PA0363" /db_xref="GeneID:879847" CDS complement(406619..407098) /gene="coaD" /locus_tag="PA0363" /EC_number="2.7.7.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphopantetheine adenylyltransferase" /protein_id="NP_249054.1" /db_xref="GeneID:879847" /translation="MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPL FSLEQRVALAQEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLA NMNRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDISKFVHPAVADALAERFKR" misc_feature complement(406622..407098) /gene="coaD" /locus_tag="PA0363" /note="Phosphopantetheine adenylyltransferase [Coenzyme transport and metabolism]; Region: CoaD; COG0669" /db_xref="CDD:440433" gene complement(407250..408845) /locus_tag="PA0364" /db_xref="GeneID:879858" CDS complement(407250..408845) /locus_tag="PA0364" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_249055.1" /db_xref="GeneID:879858" /translation="MPVPDLFAEGLARGWKTYNGSRLDDDLELEADVVVVGTGAGGGT TAEILSAAGLKVLLVEEGPLKTSSDFKMQEADAYPELYQEGIGRMSKDGAITILQGRA VGGTTLINWTSSFRTPEPTLQHWAQVYGVKGHSAEDMAPWFEKMEQRLHVAPWALPPN ANNDVIRLGCEKLGYHWKVIPRNVLGCWNLGYCGMGCPVNAKQSMLVTTIPATLDKGG ELLYLARANRLLLDGDKVTGLECLGMDERCVAPNGRRIRVRARHYVLSGGGINTPAIL LRSKAPDPSQRVGKRTFLHTVNFSAGLFDRVINPFYGAPQSIYSDHFQWDDGVTGRMS YKLEVPPLQPSLASVLLGGFGSDNALRMEQLPHTNMMLALLRDGFHPDSAEGSVGLRG DDTPVLDYRMTDYTWDGIRRAFHTMAEIQFAAGAREVRPVHSDARSAKNLQEARGIID GLRLEIYRTRLGSAHVMGGCAMGEDPAVAVADSLGRHHHLRNLSIHDGSLFPTSIGAN PQLSVYGLTAQLASALAERLARA" misc_feature complement(407253..408701) /locus_tag="PA0364" /note="Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Region: BetA; COG2303" /db_xref="CDD:441878" misc_feature complement(407955..408614) /locus_tag="PA0364" /note="GMC oxidoreductase; Region: GMC_oxred_N; pfam00732" /db_xref="CDD:366272" gene complement(408901..409449) /locus_tag="PA0365" /db_xref="GeneID:879873" CDS complement(408901..409449) /locus_tag="PA0365" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249056.1" /db_xref="GeneID:879873" /translation="MSDTTLESAGLSRRSLMKVGLIGGAFLATAGVTASLTGCSAEKP ASGLEKVRESDLPFLRALLPVMLLGAVSAEQMPKAVEGAIQSLDHNLARLSPEMFKLT QQLFDVLALPLTRGPLTGIWGSWENASGDDVRAFLSRWENSFIGLLRMGHSSLMQLAM MAWYARPEAWAHCGYPGPPKIA" gene complement(409504..410934) /locus_tag="PA0366" /db_xref="GeneID:880299" CDS complement(409504..410934) /locus_tag="PA0366" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="coniferyl aldehyde dehydrogenase" /protein_id="NP_249057.1" /db_xref="GeneID:880299" /translation="MVADIAYLQQSQQEINQLEALFARQRAAYLAQPMPDATQRVQWL KALRDLLFKEQQALIEAIDRDFSARSADETLLAEIMPSLHGIHYAAKRVKKWMKPARR AVGLQFQPASAQVVYQPLGVVGVIVPWNYPLFLSIGPLTGALAAGNRVMIKMSESTPA TGRLLKDLLARIFPEDQVAVVLGEVDVGVAFSKLPFDHLLFTGATSVGKHVMRAAAEN LTPVTLELGGKSPAIVSDSVPMKDAAERIAFGKSLNAGQTCVAPDYVLVPSRRVEEFV SQYKEVVQGFFPRLSDNPDYTAIINERQLGRLRGYLDDAREKGATLVPLFAEGQQRRL PQTLLLNVSDDMKVMQEEIFGPLLPVIPYERLEDALAYVNQRPRPLALYYFGYDKAQQ QRVLHETHSGGVCLNDTLLHVAQDDIPFGGVGPSGMGHYHGHEGFLTFSKAKGVFSKP RFNAARMIYPPYGKSIQKLVYKLFVR" misc_feature complement(409591..410880) /locus_tag="PA0366" /note="Coniferyl aldehyde dehydrogenase-like; Region: ALDH_CALDH_CalB; cd07133" /db_xref="CDD:143451" misc_feature complement(order(409873..409875,409879..409881, 410014..410016,410023..410028,410032..410034, 410326..410328,410380..410382,410467..410469, 410545..410553)) /locus_tag="PA0366" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:143451" misc_feature complement(order(410158..410160,410167..410169, 410260..410262,410545..410547)) /locus_tag="PA0366" /note="catalytic residues [active]" /db_xref="CDD:143451" gene 411224..411871 /locus_tag="PA0367" /db_xref="GeneID:880928" CDS 411224..411871 /locus_tag="PA0367" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249058.1" /db_xref="GeneID:880928" /translation="MAPRIKTRDRIAQASLELFNAQGERSVTTNHIATHLGISPGNLY YHYPNKQAIIAELFAEYESHVESFLRLPEGRGLTVDDKTFYLEALLAAMWRYRFLHRD LEHLLESDPELAARYRAFAQRCLVNAKAIYRGFTEAGILRMNETQLEALTLNAWIILT SWVRFLCTTLDLDGDLSEAQLRRGIYQVLALESGHIEAQAQDAVDGISERLYVPL" misc_feature 411254..411394 /locus_tag="PA0367" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:425684" misc_feature 411404..411835 /locus_tag="PA0367" /note="Bacterial transcriptional repressor; Region: TetR; pfam13972" /db_xref="CDD:433616" gene complement(411856..412266) /locus_tag="PA0367a" /db_xref="GeneID:17373340" CDS complement(411856..412266) /locus_tag="PA0367a" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="YP_008719732.1" /db_xref="GeneID:17373340" /translation="MELTLRHNPMLDDADCEAILAIHAAVGWDRRMPPAELRTLYQHS GYSLLAERDGRLVGLLRAEEETPIRVWLAEIAVLPGAQSSGVGAALLRRFAEDHRGAY LFTDATLGTEAFFRRHGIHIQQVLEKTLRDQSGT" misc_feature complement(<411910..412233) /locus_tag="PA0367a" /note="N-acetylglutamate synthase or related acetyltransferase, GNAT family [Amino acid transport and metabolism]; Region: ArgA; COG1246" /db_xref="CDD:440859" gene complement(412329..413327) /locus_tag="PA0368" /db_xref="GeneID:881245" CDS complement(412329..413327) /locus_tag="PA0368" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249059.1" /db_xref="GeneID:881245" /translation="MTASPTFQPAWWLPNPHLQTLWSPFFRRGPTLERQRERLWLADG DFIDLDWAGPHDAETPLVLALHGLTGSSSSHYILGLQRALLERGWASVALNWRGCSGE PNRLPRGYHSGVSDDLAEVVAHLRARRPQAPLYAVGYSLGGNVLLKYLGETAGDCPLL GGVAVSVPFRLDECADRIGLGFSRVYQAHFMKAMLAYVQDKQRLFGEQGQAEGLAALQ RLGPLEGMRTFWDFDGRVTAPLHGFADARDYYRRASSRYYLPDIRTPSLIIHSSDDPF VFARSLPDRSELAPCTELELHARGGHVGFVDGSPRQPTYYLERRIPDWLEARLRQH" misc_feature complement(412341..413327) /locus_tag="PA0368" /note="Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]; Region: YheT; COG0429" /db_xref="CDD:440198" gene complement(413364..413930) /locus_tag="PA0369" /pseudogene="unknown" /db_xref="GeneID:882043" gene complement(413933..414529) /locus_tag="PA0370" /db_xref="GeneID:882281" CDS complement(413933..414529) /locus_tag="PA0370" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249061.1" /db_xref="GeneID:882281" /translation="MSKPTAKAPGRHGGQGQLRIIGGEWRSRRFVFPDGPGLRPTPDR VRETLFNWLAPYVEGARVLDPFAGSGALFLEALSRGAREGLALDTNGEAVAALRNHLD ALKCGTAQLVLGDAVRYLGNQAPSAFDLVFLDPPFHQNLLQDACRLLETRGWLNPDAW IYTESESVPSSLGLPGNWRLHREKKAGNVHYALWQRGA" misc_feature complement(413936..414478) /locus_tag="PA0370" /note="16S rRNA G966 N2-methylase RsmD [Translation, ribosomal structure and biogenesis]; Region: RsmD; COG0742" /db_xref="CDD:440505" gene complement(414529..416016) /locus_tag="PA0371" /db_xref="GeneID:882994" CDS complement(414529..416016) /locus_tag="PA0371" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249062.1" /db_xref="GeneID:882994" /translation="MSERTGLRYGLLGLIVIALLAALAYFVARPPQTPAAAHAAAVEE NQLQSLKDVAKQAPVHRKLDIQEWKTAEGAKVLFVEAHELPMFDLRLTFAAGSSQDAG TPGLSMLTNAMLNEGVPGKDTTAIAAGFEDLGASFSNGSYRDMAVAGLRSLSEADKRT QALKLFEQVIGQPTFPEDALARIKNQVLAGFEYQKQNPGKLAGLELFKRLYGEHPYAH SSDGDEKSVPTISREQLQAFHKKAYAAGNVVIALVGDLSRQEAEAIAAEVSKALPQGP ALAKTVQPETPKPGLTHIDFPSEQTHLMLAQLGIDRQDPDYAALYLGNQILGGGGFGT RLMDQVREKRGLTYGIYSGFTAMQARGPFMINFQTRAELSEGALKLVQDIVRDYLANG PTQKELDDAKRELAGSFPLSTASNADIVGQLGAIGFYGLPLDYLESFLKQVEGLSVEQ VRTAMAKHLDADAFVIVSAGPSVPQKPLPPPTAKPAQQPSGVPEH" misc_feature complement(414604..415857) /locus_tag="PA0371" /note="Predicted Zn-dependent peptidase, M16 family [General function prediction only]; Region: PqqL; COG0612" /db_xref="CDD:440377" gene complement(416009..417406) /locus_tag="PA0372" /db_xref="GeneID:883000" CDS complement(416009..417406) /locus_tag="PA0372" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="zinc protease" /protein_id="NP_249063.1" /db_xref="GeneID:883000" /translation="MAARKVQITMKTPARRRVGLLLASLCLPLFAQAAETQPTHEFSL DNGLKVIVREDHRAPVVVSQLWYRIGSSYETPGLTGLSHALEHMMFKGSRKLGPGEAS RVLRDLGAEENAFTTDDYTAYYQVLARDRLPVALEMEADRMAHLSLPVDQFKSEIEVI KEERRLRTDDNPNALAFERFKAAAYPASGYHTPTIGWMADLQRMTIDDLRHWYESWYA PNNATLVVVGDVTADEVKTLAKRYFGEIPWRQLPPARKPLELAEPGERRLKLYVRTQL PNLIMGFNVPSLGSSENPREVNALRLIGALLDGGYSARLASRLERGEELVAGASTYYD AFNRGDSLFVLSATPNVQKGKTLEQVEAGLWKQLDDLKQNPPSAAEIERVRAQMIAGM VYEKDSIAAQASSIGQLESVGLSWKLIDQDLEALKAVTPDDIQKAARTYFTPSRLTLA QVLPVKAEEKEARHE" misc_feature complement(416030..417316) /locus_tag="PA0372" /note="Predicted Zn-dependent peptidase, M16 family [General function prediction only]; Region: PqqL; COG0612" /db_xref="CDD:440377" gene 417527..418894 /gene="ftsY" /locus_tag="PA0373" /db_xref="GeneID:883018" CDS 417527..418894 /gene="ftsY" /locus_tag="PA0373" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="signal recognition particle receptor FtsY" /protein_id="NP_249064.1" /db_xref="GeneID:883018" /translation="MFGSNDDKKAPQGGEKKGLFGWWRKKPQAGEQPADQPVEPVSET AAAEQRAPADDVAQSLTEQPGRQQPSAAEPAEPPAPVAEAPLAGDEPASAEEHSPRPE APVAQPEPILAAEPEPEPEPEPEPEPEPVAPLAAAPAVSEPATRPGFFARLRQGLSKT SASIGEGMASLFLGRKEIDDDLLDDIETRLLTADVGVEATTLIVQNLTKRVARKELAD SGALYKALQEELASLLRPVEQPLQVDVAREPYVILVVGVNGVGKTTTIGKLAKKLQLE GKKVMLAAGDTFRAAAVEQLQVWGERNRIPVIAQHTGADSASVIFDAVQAAKARGIDV LIADTAGRLHTKDNLMEELKKVRRVIGKLDETAPHEVLLVLDAGTGQNAINQAKQFNL AVELTGLALTKLDGTAKGGVIFALAKQFGLPIRYIGVGEGIDDLRTFEADAFVQALFA ERENA" misc_feature 417971..418879 /gene="ftsY" /locus_tag="PA0373" /note="Signal recognition particle GTPase FtsY [Intracellular trafficking, secretion, and vesicular transport]; Region: FtsY; COG0552" /db_xref="CDD:440318" gene 418891..419562 /gene="ftsE" /locus_tag="PA0374" /db_xref="GeneID:883078" CDS 418891..419562 /gene="ftsE" /locus_tag="PA0374" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cell division protein FtsE" /protein_id="NP_249065.1" /db_xref="GeneID:883078" /translation="MIRFEQVGKRYPNGHVGLHEVSFRVHRGEILFVTGHSGAGKSTL LRLILAMERPTSGKLLLGGQDLGRITTAQIPFLRRQIGVVFQNHQLLTDRTVADNIAL PLQILGMPKPEIAKRVASALERVNLKEKGEALPSDLSTGQQQRVGIARAIVHQPALLL ADEPTGNLDPRLASEIMGVFEDINRLGTTVLIASHDLALIARMRHRMLTLQRGRIIAD REDEA" misc_feature 418891..419550 /gene="ftsE" /locus_tag="PA0374" /note="Cell division ATPase FtsE [Cell cycle control, cell division, chromosome partitioning]; Region: FtsE; COG2884" /db_xref="CDD:442130" gene 419562..420569 /gene="ftsX" /locus_tag="PA0375" /db_xref="GeneID:883092" CDS 419562..420569 /gene="ftsX" /locus_tag="PA0375" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cell division protein FtsX" /protein_id="NP_249066.1" /db_xref="GeneID:883092" /translation="MSANDLPRGPEEGAPERKTREKPSQEQTDWSGSFSAYLESHRAS LVDSLRRLFGHPFGSFFTCLVMGITLSLPMGLSLLLNNVERLGGSWQRAAQISLFLDL KTSENQGQDLREQIERLPDVIEAQLISREQALSELQEQSGLGEALKELPENPLPPVIS VTPKQIDRAGLEALRQQLAELPHVQQAQLDLVWVERLSAILKLGERFVFGLTILLVLT LLLVVGNTIRLHIENRRNEIEVIKLVGGTDGYVRRPFLYMGALYGLGAGILSWALLAY SLNWLNGSVVNLSGLYGSDFGLQGVPLDDGLSLTVGAVLLGWVGAWLAVARHLRELAP R" misc_feature 419685..420554 /gene="ftsX" /locus_tag="PA0375" /note="Cell division protein FtsX [Cell cycle control, cell division, chromosome partitioning]; Region: FtsX; COG2177" /db_xref="CDD:441780" gene 420683..421537 /gene="rpoH" /locus_tag="PA0376" /db_xref="GeneID:883126" CDS 420683..421537 /gene="rpoH" /locus_tag="PA0376" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor RpoH" /protein_id="NP_249067.1" /db_xref="GeneID:883126" /translation="MTTSLQPVHALVPGANLEAYVHSVNSIPLLSPEQERELAERLFY QQDLEAARQMVLAHLRFVVHIAKSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRL VSFAVHWIKAEIHEFILRNWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAE SLGVEPREVREMESRLTGQDMAFDPAADADDESAYQSPAHYLEDHRYDPARQLEDADW SDSSSANLHEALEGLDERSRDILQQRWLSEEKATLHDLAEKYNVSAERIRQLEKNAMS KLKGRILA" misc_feature 420683..421534 /gene="rpoH" /locus_tag="PA0376" /note="RNA polymerase factor sigma-32; Reviewed; Region: PRK06596" /db_xref="CDD:235838" gene 421602..422207 /locus_tag="PA0377" /db_xref="GeneID:883137" CDS 421602..422207 /locus_tag="PA0377" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249068.1" /db_xref="GeneID:883137" /translation="MPRNTRWLFYLSLAVLTFVVGAWLVRTPEPARPLPWLADWQEQV LAPLADNALTLRQLHDAVDGELWVDPRLDGVRLAFRGRLLGDGGPWQVEGELGLSAEE QLSLQRASALQPGSAPQPLSAGLEGQLGDKPIVALSMIPEGRVGAERLLASLGQPRLR LQLAQGEAWVYPQLGLTAHLPDDDLRLMLAVPRQALEKPPR" gene complement(422212..422943) /locus_tag="PA0378" /db_xref="GeneID:879835" CDS complement(422212..422943) /locus_tag="PA0378" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="monofunctional biosynthetic peptidoglycan transglycosylase" /protein_id="NP_249069.1" /db_xref="GeneID:879835" /translation="MAAPFFQAKPRMLRSLFRRLFKYLLWFMAASVVLVAVLRWVPPP GTMVMVERKVGSWVDGQPIDLQRDWRSWEQLPDSLKVAVIAGEDQHFAEHHGFDLPAI QQALAHNERGGSIRGASTLSQQVAKNVFLWSGRSWLRKGLEAWFTLLIETLWTKQRIL EVYLNSAEWGPGVFGAQAAARYHFGLDAERLSRTQASQLAAVLPSPLKWSAARPGPYV RQRAAWIRQQMWQLGGDDYLLRLER" misc_feature complement(422239..422904) /locus_tag="PA0378" /note="monofunctional biosynthetic peptidoglycan transglycosylase; Region: mono_pep_trsgly; TIGR02070" /db_xref="CDD:273951" gene 422980..423357 /locus_tag="PA0379" /db_xref="GeneID:879822" CDS 422980..423357 /locus_tag="PA0379" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249070.1" /db_xref="GeneID:879822" /translation="MLRPFLLLAAFFGFTGVALGAFAAHGLKKQLSAEYLAVFQTGVH YQLIHALALFGVALLATRLDGRLVSAAGGLFTLGILLFSGSLYLLTLSGIGKLGIVTP FGGVSFLAGWLCLGLAAWRLGNA" misc_feature 422980..423354 /locus_tag="PA0379" /note="Uncharacterized membrane protein YgdD, TMEM256/DUF423 family [Function unknown]; Region: YgdD; COG2363" /db_xref="CDD:441930" gene 423460..423660 /locus_tag="PA0380" /db_xref="GeneID:879813" CDS 423460..423660 /locus_tag="PA0380" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="sulfur carrier protein ThiS" /protein_id="NP_249071.1" /db_xref="GeneID:879813" /translation="MQIQLNGEPFELPDAQSVADLLARLELGGRRVAVELNLDIVPRS QHASTALKDGDRVEIVHAIGGG" misc_feature 423460..423657 /locus_tag="PA0380" /note="Sulfur carrier protein ThiS (thiamine biosynthesis) [Coenzyme transport and metabolism]; Region: ThiS; COG2104" /db_xref="CDD:441707" gene 423719..424516 /gene="thiG" /locus_tag="PA0381" /db_xref="GeneID:879802" CDS 423719..424516 /gene="thiG" /locus_tag="PA0381" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="thiazole synthase" /protein_id="NP_249072.1" /db_xref="GeneID:879802" /translation="MSQASSTDTPFVIAGRTYGSRLLVGTGKYKDLDETRRAIEASGA EIVTVAVRRTNIGQNPDEPNLLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDG HNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAV MPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTA IAHAKDPVMMAEAMKHAIVAGRLAYLAGRMPRKLYASASSPLDGLID" misc_feature 423734..424513 /gene="thiG" /locus_tag="PA0381" /note="Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis) [Coenzyme transport and metabolism]; Region: ThiG; COG2022" /db_xref="CDD:441625" gene 424670..425341 /gene="micA" /locus_tag="PA0382" /db_xref="GeneID:879787" CDS 424670..425341 /gene="micA" /locus_tag="PA0382" /EC_number="2.1.1.33" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tRNA (guanine-N(7)-)-methyltransferase" /protein_id="NP_249073.1" /db_xref="GeneID:879787" /translation="MRTVKSFVMRAGRMTEGQQRGLDLGWPKFGLELSDEVQDFDAIF GRQAPRTFEIGFGMGHSTLEMAAAAPDIDFIGVEVHKPGVGALLNGLLTQGLGNVRVY SCDALEVLRHCVADASLDRLLLFFPDPWHKKRHHKRRIVQPEFAELVRRKLKVGGVLH MATDWEPYAEHMLDVMSAAPGYRNQAEDGRFVPRPQERPVTKFERRGERLGHGVWDLK FERVD" misc_feature 424709..425329 /gene="micA" /locus_tag="PA0382" /note="tRNA G46 N7-methylase TrmB [Translation, ribosomal structure and biogenesis]; Region: TrmB; COG0220" /db_xref="CDD:439990" gene 425504..426850 /locus_tag="PA0383" /db_xref="GeneID:879731" CDS 425504..426850 /locus_tag="PA0383" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249074.1" /db_xref="GeneID:879731" /translation="MLKKLGILLLGAGCAWAAQAKVDEVQAARLDQDLTPLGAERAGN ADGSIPPWTGGITQAPAGYRPGMHHLDPFAADRPRLVLDSRNMAAYQALLTPGTQALL QANPDYHLRVFPTRRSASLPQRLYDATRANASRAELIADGNGVQGAAAGVPFPLPQSG QEAIWNHIMRYRGEQLHLQTNQAAVLANGSYNLLKLDRYLYFVYGREGMIPENLDNTL FYYKYKVVAPARLAGSALVVQETLDQVLSIRKAWRFNRGERRVRRLPTLAYDSLQPDT NGMATADTVDVYNGAPDHYEWALLGKREMLVPYNSYAVHQKGLAYGDILKSRFINPDL LRYELHRVWVVEATLRKGFSHPYAKRRFYLDEDSWQILAADIYDKDGVLTRAQEVHPI NYYDVPLVSSTLEAIYDFKGGRYFVDGLDNNEPMYDFGVQVGPRDFTPQALRREGN" misc_feature 425744..426835 /locus_tag="PA0383" /note="Protein of unknown function (DUF1329); Region: DUF1329; pfam07044" /db_xref="CDD:429261" gene complement(426863..427120) /locus_tag="PA0384" /db_xref="GeneID:879608" CDS complement(426863..427120) /locus_tag="PA0384" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249075.1" /db_xref="GeneID:879608" /translation="MKPIKHLYLHFTDGQRLSLRFPRQQDDPAEVARSIRQQLDTPYL SVEVDGDLLLIPRDSIKYLQISPAPARLDDDGTLRGAELIV" gene complement(427182..427505) /locus_tag="PA0385" /db_xref="GeneID:879510" CDS complement(427182..427505) /locus_tag="PA0385" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249076.1" /db_xref="GeneID:879510" /translation="MDYALDLIATLSRWSRSHLSDISLAIMATLLVLFGPAINAWVQQ RIGSLNFVFRTLLFVLICAVGYGLAMVFVTPWLAKGLGYFNNYTLAPVLLLVFFVIGM IADRS" misc_feature complement(427188..427493) /locus_tag="PA0385" /note="Protein of unknown function (DUF3392); Region: DUF3392; pfam11872" /db_xref="CDD:432149" gene complement(427586..428740) /locus_tag="PA0386" /db_xref="GeneID:878688" CDS complement(427586..428740) /locus_tag="PA0386" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="coproporphyrinogen III oxidase" /protein_id="NP_249077.1" /db_xref="GeneID:878688" /translation="MTQATPFQLPPLALYVHIPWCVRKCPYCDFNSHAAGPELPEEAY VDALLADLEQDLRHVHGRRLGSIFFGGGTPSLFSAKALGRLLEGVERRVGFADGIEIT LEANPGTFEQVKFADYRRLGINRLSIGVQSFQADKLQALGRIHDGAEAVRAADMARQA GFDNFNLDLMHGLPGQSLDDALADLRQALALAPTHLSWYQLTMEPNTVFWSQPPELPE DDILWDIQEAGQALLDEHGYRQYETSAYARDGLRARHNLNYWSFGDFLGIGAGAHAKL SAPDGRIVRTWKTRLPKDYLNPQKAFQAGERPLEAADLPFEFMMNVLRLVDGVPAALY PQRTGQPLAAIADACAAARDAGLLADDPQHLRPSERGQLFLNDLLQHFLP" misc_feature complement(427589..428719) /locus_tag="PA0386" /note="Coproporphyrinogen-III oxidase HemN (oxygen-independent) or related Fe-S oxidoreductase [Coenzyme transport and metabolism]; Region: HemN; COG0635" /db_xref="CDD:440400" gene complement(428861..429454) /locus_tag="PA0387" /db_xref="GeneID:878675" CDS complement(428861..429454) /locus_tag="PA0387" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="non-canonical purine NTP pyrophosphatase" /protein_id="NP_249078.1" /db_xref="GeneID:878675" /translation="MIKLEQLVLASHNAGKLKELQAMLGASVKVRSIGEFSQVEPEET GLSFVENAILKARNAARLSGLPALADDSGLAVDFLGGAPGIYSARYADGRGDAANNAK LLEAMKDVPDAERGAQFVSVLALVRHADDPLPILCEGIWEGRILREARGAHGFGYDPL FWVPERDCSSAELAPEEKNRLSHRARAMALLKQRLGL" misc_feature complement(428870..429439) /locus_tag="PA0387" /note="dITP/XTP pyrophosphatase; Reviewed; Region: PRK00120" /db_xref="CDD:234648" misc_feature complement(order(428903..428908,428981..428986, 428990..428992,429098..429100,429191..429196, 429233..429241,429398..429400,429407..429412, 429416..429418)) /locus_tag="PA0387" /note="active site" /db_xref="CDD:238285" misc_feature complement(order(429188..429190,429197..429199, 429206..429208,429215..429220,429320..429328)) /locus_tag="PA0387" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:238285" gene complement(429451..429870) /locus_tag="PA0388" /db_xref="GeneID:878619" CDS complement(429451..429870) /locus_tag="PA0388" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249079.1" /db_xref="GeneID:878619" /translation="MRRFTAFVLGLCLSLPVLAEQVQRFGDLDVHYNVFNSSFLQPNV ASAVGLVRSKAQGVINVVPMEKGKPVEAAVTGSAKDLTGKVIPLEFRRVSEEGAIYNL AQFPISQRETLVFTIKVEAKGEPAQTFSFNKEIFPDE" misc_feature complement(429457..429804) /locus_tag="PA0388" /note="Domain of unknown function (DUF4426); Region: DUF4426; pfam14467" /db_xref="CDD:433974" gene complement(430002..430622) /locus_tag="PA0389" /db_xref="GeneID:878577" CDS complement(430002..430622) /locus_tag="PA0389" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249080.1" /db_xref="GeneID:878577" /translation="MRADLEIIQEWIPAGSRVLDLGCGDGELLAWLRDHKQVSGYGLE IDPDNIARCIENGVNVIEQDLDKGLGNFASDSFDVVVMTQALQAVHYPDKILEEMLRV GKTCIITFPNFGHWRCRWYLARNGRMPVSEFLPYTWYNTPNIHFCTFQDFERLCRQLR MRVLDRLAVDRDHRHGWASRLWPNLLGEIGIYRVTGPGVQTRNLAV" misc_feature complement(430041..430619) /locus_tag="PA0389" /note="Methionine biosynthesis protein MetW; Region: MetW; pfam07021" /db_xref="CDD:399779" misc_feature complement(order(430374..430376,430428..430436, 430488..430493,430542..430562)) /locus_tag="PA0389" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(430630..431769) /gene="metX" /locus_tag="PA0390" /db_xref="GeneID:878549" CDS complement(430630..431769) /gene="metX" /locus_tag="PA0390" /EC_number="2.3.1.31" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="homoserine O-acetyltransferase" /protein_id="NP_249081.1" /db_xref="GeneID:878549" /translation="MPTVFPDDSVGLVSPQTLHFNEPLELTSGKSLAEYDLVIETYGE LNATQSNAVLICHALSGHHHAAGYHSVDERKPGWWDSCIGPGKPIDTRKFFVVALNNL GGCNGSSGPASINPATGKVYGADFPMVTVEDWVHSQARLADRLGIRQWAAVVGGSLGG MQALQWTISYPERVRHCLCIASAPKLSAQNIAFNEVARQAILSDPEFLGGYFQEQGVI PKRGLKLARMVGHITYLSDDAMGAKFGRVLKTEKLNYDLHSVEFQVESYLRYQGEEFS TRFDANTYLLMTKALDYFDPAAAHGDDLVRTLEGVEADFCLMSFTTDWRFSPARSREI VDALIAAKKNVSYLEIDAPQGHDAFLMPIPRYLQAFSGYMNRISV" misc_feature complement(430633..431763) /gene="metX" /locus_tag="PA0390" /note="homoserine O-acetyltransferase; Provisional; Region: metX; PRK00175" /db_xref="CDD:234678" gene complement(431858..433825) /locus_tag="PA0391" /db_xref="GeneID:878546" CDS complement(431858..433825) /locus_tag="PA0391" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249082.1" /db_xref="GeneID:878546" /translation="MSMERLSHQIDAYVAWKRELMREITRYRGWLERSRLNSPAVEAK LERALRQLRADHITLAFVGEFSRGKTELINSLFFAGYGQRMLPSHAGRTTMCPTELFH DPRAERSYIRLLPIETRLADASVAQFKRVPRHWVNIPLDTGDPEGMAQAFAQVAKTKA LPVEQAIQLGFHPDALEAADEPDQVRVPAWRHALVNFDHPLLRQGLRILDTPGLNALG SEPELTLSMLPNAQAILFLLSADAGVTASDMEIWQKYIQPLREDGHSSLFAVLNKIDV LWDDLSGERFVQNAIRLIQDGTARQLGLQRGDVLPLSAKQALLAKVRGEPALLERSRL DRLEALLCERIVAQKEALLENAVLGQVLGLLHNSQQLLRLRLEKVEEQRALLDDKQRD SGQLLFELTAKTKDDHGRHHRRLLNLKTNQRLLQHQGATLRETIRSERMEQHLQKVRR NLNGSLTTVGINQAILAFFRAVEHDLDNLEHEAGMANRMVAAIYRRHNEENPLYALDA PQLRVQRYQRELLQLKKKGDQFRLQLKTVLTEQRLLTRRFFATLVQEVVGLHQRLREE TERWANDALMPLMQHTLENKQLLESHMLRLKGLAQETQQVRQRSQAFAGFAGELQEQL REAGDILRQLRRPSPLQRQAKVVNLPGSQRA" misc_feature complement(431861..433699) /locus_tag="PA0391" /note="Replication fork clamp-binding protein CrfC (dynamin-like GTPase family) [Replication, recombination and repair]; Region: CrfC; COG0699" /db_xref="CDD:440463" gene complement(434226..434819) /locus_tag="PA0392" /db_xref="GeneID:878514" CDS complement(434226..434819) /locus_tag="PA0392" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249083.1" /db_xref="GeneID:878514" /translation="MIGLNTAAIYILQTLGSLYLLIVLLRFILQLVRADFYNPLSQFI VRATKPLLNPLRRIIPGFGGIDLASLVLAILIQLVLMILILMLMGYGVGGFIMQLLIW SIIAVTSLFLKVFFFALIISVILSWVAPGSYNPGAQLVNQICEPLLMPFRKLLPNLGG LDLSPIFAFLALKLIDMLVINNLAAMTGMPQQLSIFL" misc_feature complement(434589..434783) /locus_tag="PA0392" /note="YGGT family; Region: YGGT; pfam02325" /db_xref="CDD:460533" misc_feature complement(434268..434519) /locus_tag="PA0392" /note="Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family [Posttranslational modification, protein turnover, chaperones]; Region: Ycf19; COG0762" /db_xref="CDD:440525" gene complement(434830..435651) /gene="proC" /locus_tag="PA0393" /db_xref="GeneID:878413" CDS complement(434830..435651) /gene="proC" /locus_tag="PA0393" /EC_number="1.5.1.2" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyrroline-5-carboxylate reductase" /protein_id="NP_249084.1" /db_xref="GeneID:878413" /translation="MSTPRIAFIGAGNMAASLIGGLRAQGVPAAQIRASDPGAEQRAK IAGEFAIDVVESNAEAVADADVVVLSVKPQAMKAVCQALAPALKPEQLIVSIAAGIPC ASLEAWLGQPRPVVRCMPNTPALLRQGASGLYANAQVSAAQCEQAGQLLSAVGIALWL DDEAQIDAVTAVSGSGPAYFFLLMQAMTDAGEKLGLSRETASRLTLQTALGAAQMALS SEVEPAELRRRVTSPNGTTEAAIKSFQANGFEALVEQALNAASQRSAELAEQLGQ" misc_feature complement(434845..435648) /gene="proC" /locus_tag="PA0393" /note="Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]; Region: ProC; COG0345" /db_xref="CDD:440114" gene complement(435663..436355) /locus_tag="PA0394" /db_xref="GeneID:878395" CDS complement(435663..436355) /locus_tag="PA0394" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249085.1" /db_xref="GeneID:878395" /translation="MSTIAENIAKVAARIREAAQAAGRDPATVGLLAVSKTKPAAAVR EAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPIAEHFQWVHSVDR LKIAQRLSEQRPAGLPPLNVCLQVNVSGEASKSGCAPEDLPALAEAVKQLPNLRLRGL MAIPEPTAERAAQHAAFARLRELLLDLNLGLDTLSMGMSDDLEAAIGEGATWVRIGTA LFGARDYGAPAS" misc_feature complement(435690..436349) /locus_tag="PA0394" /note="Pyridoxal 5-phosphate (PLP)-binding TIM barrel domain of Type III PLP-Dependent Enzymes, Yggs-like proteins; Region: PLPDE_III_Yggs_like; cd06824" /db_xref="CDD:143497" misc_feature complement(order(435705..435710,435714..435716, 435762..435764,435867..435869,436119..436121, 436185..436187,436248..436250,436254..436256)) /locus_tag="PA0394" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143497" misc_feature complement(436248..436250) /locus_tag="PA0394" /note="catalytic residue [active]" /db_xref="CDD:143497" gene 436570..437604 /gene="pilT" /locus_tag="PA0395" /db_xref="GeneID:878389" CDS 436570..437604 /gene="pilT" /locus_tag="PA0395" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="twitching motility protein PilT" /protein_id="NP_249086.1" /db_xref="GeneID:878389" /translation="MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEH KQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSK VLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIED PIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAA ETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGR VAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDMCLKGLVAKGLISRENA REKAKIPENF" misc_feature 436570..437583 /gene="pilT" /locus_tag="PA0395" /note="Type IV pilus assembly protein PilT, pilus retraction ATPase [Cell motility, Extracellular structures]; Region: PilT; COG2805" /db_xref="CDD:442056" gene 437782..438930 /gene="pilU" /locus_tag="PA0396" /db_xref="GeneID:878362" CDS 437782..438930 /gene="pilU" /locus_tag="PA0396" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="twitching motility protein PilU" /protein_id="NP_249087.1" /db_xref="GeneID:878362" /translation="MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSP EQTRETVLGVMNEQQRRDFAENHECNFAISARGIGRFRVSAFYQRNLVGMVLRRIETN IPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIED PIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFA ETGHLCLATLHANNANQALERIIHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKG RRAVIEVLLNTPLAADLIRKGEVHELKPLMKRSTEQGMQTFDQALYQLYTQGEITYED ALAHADSANDLRLMIKLGSESDADHLSSLTQGLSLEITDDDPAGRRFR" misc_feature 437782..438891 /gene="pilU" /locus_tag="PA0396" /note="Type IV pilus assembly protein, ATPase PilU [Cell motility, Extracellular structures]; Region: PilU; COG5008" /db_xref="CDD:444032" gene complement(438938..439837) /locus_tag="PA0397" /db_xref="GeneID:878314" CDS complement(438938..439837) /locus_tag="PA0397" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cation efflux system protein" /protein_id="NP_249088.1" /db_xref="GeneID:878314" /translation="MSAGHEHSFAQTNSTRLKWALLLTGSFLVAEVVGGILTGSLALI SDAAHMLTDAVALAIALAAINIARRPTNDRLTYGYHRFEILAAAFNAFLLFGVAFYIL YAAYERLNQPAEIQSVGMLVIAVLGLLVNLASMRLLAPAQGNSLNVKGAYLEVWSDML GSLGVIVAAIVIRFTGWAWVDSLVAVLIGFWVLPRTWILLRESLHVLLEGVPKEIQLA ELREALLGIPGVTGLHDLHVWSITSGKISLTSHLVYDPALVDAEALLGTVKALLHDRY EIEHSTLQLETSACAQAEEPLAY" misc_feature complement(438962..439837) /locus_tag="PA0397" /note="Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]; Region: CzcD; COG1230" /db_xref="CDD:440843" gene 439991..440395 /locus_tag="PA0398" /db_xref="GeneID:878302" CDS 439991..440395 /locus_tag="PA0398" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249089.1" /db_xref="GeneID:878302" /translation="MTQQHDTHSKAIGYLLWIFGFTGSHRFYYGKPITGTIWFFTFGL FFIGWIIDLFLIPSMDREADRRFQGGNLDYNVAWILLTFLGVLGVHRMYMGKWITGII YLFTGGLFFLGVLYDFWTLNGQVSERNGPQRI" misc_feature 439991..440215 /locus_tag="PA0398" /note="Uncharacterized membrane protein YozV, TM2 domain, contains pTyr [General function prediction only]; Region: TM2; COG2314" /db_xref="CDD:441888" misc_feature 440207..440347 /locus_tag="PA0398" /note="TM2 domain; Region: TM2; pfam05154" /db_xref="CDD:428337" gene 440638..442011 /locus_tag="PA0399" /db_xref="GeneID:878291" CDS 440638..442011 /locus_tag="PA0399" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cystathionine beta-synthase" /protein_id="NP_249090.1" /db_xref="GeneID:878291" /translation="MTSDSRPAVLDLIGNTPLVRVTRFDTGPCTLYLKLESQNPGGSI KDRIGVAMIEAAERDGRLRPGGTIVEATAGNTGLGLALVGRAKGYRVVLVVPDKMSTE KVLHLRAMGAEVHITRSDVGKGHPEYYQDVAARLAQDIPGAFFADQFNNPANPLAHEC GTGPELWAQTGHDLDAIVVGVGSSGTLTGLTRFFQKVQPELEMVLADPEGSIMAEYSR SGTLGTPGSWAVEGIGEDFVPAIADLSSVRHAYSISDEESFAMARELLRVEGIPGGSS TGTLLAAALRFCREQKEPKRVVSFVCDTGTRYLSKIYNDQWMTDQGLLQRKHYGDLRD IIARRFEEGRVISVGPDDTLLTAFQRMRLADVSQLPVLDDGKLVGVIDESDILLGVHA DAPRFRDAVSSAMNAAPETLAPGASLAQLQAVLDRGLVAIVADASGFHGLITRFDLLN HLRRKLA" misc_feature 440662..441570 /locus_tag="PA0399" /note="Cysteine synthase [Amino acid transport and metabolism]; Region: CysK; COG0031" /db_xref="CDD:439802" misc_feature 441637..441990 /locus_tag="PA0399" /note="Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the pyridoxal-phosphate (PALP) dependent enzyme domain; Region: CBS_pair_CBS; cd04608" /db_xref="CDD:341382" misc_feature order(441661..441663,441667..441669,441673..441675, 441739..441747,441925..441927,441961..441963, 441967..441969,441973..441978,441985..441987) /locus_tag="PA0399" /note="ligand binding site II [chemical binding]; other site" /db_xref="CDD:341382" misc_feature 441661..441852 /locus_tag="PA0399" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341382" misc_feature order(441739..441741,441775..441777,441787..441792, 441799..441801,441865..441867,441925..441933, 441973..441975) /locus_tag="PA0399" /note="putative ligand binding site I [chemical binding]; other site" /db_xref="CDD:341382" misc_feature 441865..441987 /locus_tag="PA0399" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341382" gene 442008..443192 /locus_tag="PA0400" /db_xref="GeneID:878286" CDS 442008..443192 /locus_tag="PA0400" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cystathionine gamma-lyase" /protein_id="NP_249091.1" /db_xref="GeneID:878286" /translation="MSQHDQHPDAPAQAFATRVIHAGQAPDPSTGAIMPPIYANSTYI QESPGVHKGLDYGRSHNPTRWALERCVADLEGGTQAFAFASGLAAISSVLELLDAGSH IVSGNDLYGGTFRLFERVRRRSAGHRFSFVDPTDLQAFEAALTPETRMVWVETPSNPL LRLTDLRAIAQLCRARGIISVADNTFASPYIQRPLELGFDVVVHSTTKYLNGHSDVIG GIAIVGDNPDLRERLGFLQNSVGAISGPFDAFLTLRGVKTLALRMERHCSNALALAQW LERQPQVARVYYPGLASHPQHELAKRQMRGFGGMISLDLRCDLAGARRFLENVRIFSL AESLGGVESLIEHPAIMTHASIPAETRADLGIGDSLIRLSVGVEALEDLQADLAQALA KI" misc_feature 442050..443189 /locus_tag="PA0400" /note="Cystathionine beta-lyase/cystathionine gamma-synthase [Amino acid transport and metabolism]; Region: MetC; COG0626" /db_xref="CDD:440391" gene complement(443419..444690) /locus_tag="PA0401" /db_xref="GeneID:878275" CDS complement(443419..444690) /locus_tag="PA0401" /EC_number="3.5.2.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="dihydroorotase" /protein_id="NP_249092.1" /db_xref="GeneID:878275" /translation="MTISIRGARVIDPASDLDQVGDLHIEAGKIVAIGAAPAGFSAQK TLDGAGLVAAPGLVDLSVALREPGYGRKGNVESETRAAAAGGTTSLCCPPYTRPVLDT PAVAELILDRAREAGNAKVYPIGALTRGFGGEQLSELVALRDTGCVAFTNGLHGFASN RILRRALEYAATFDLTVIFTSQDTDLAEGGLAHEGPTASFLGLAGIPETAETVALARN LLLVEQSGVRAHFSQLTSARGIELVAQAQARGLPVTCDVALYQLILTDEALVGFSSLY HVQPPLRTRADREALREAVKNGVVQAIASHHQPHEADAKNAPFAATEPGISGAELLLP LAMTLVQDGLLDLPTLLARLSHGPAQALRLPAGRLAVGQAADLVLFDPQGSTLAGESW YSKGQNSPFVGHCLPGRVRYTLVDGHLTHEG" misc_feature complement(443425..444690) /locus_tag="PA0401" /note="dihydroorotase; Validated; Region: pyrC; PRK09357" /db_xref="CDD:236479" misc_feature complement(order(443773..443775,443992..443994, 444151..444153,444502..444504,444508..444510)) /locus_tag="PA0401" /note="active site" /db_xref="CDD:238642" gene complement(444687..445691) /gene="pyrB" /locus_tag="PA0402" /db_xref="GeneID:878267" CDS complement(444687..445691) /gene="pyrB" /locus_tag="PA0402" /EC_number="2.1.3.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aspartate carbamoyltransferase" /protein_id="NP_249093.1" /db_xref="GeneID:878267" /translation="MPTDAKRPLQLNDQGQLRHFISLDGLPRELLTEILDTADSFLEV GARAVKKVPLLRGKTVCNVFFENSTRTRTTFELAAQRLSADVISLNVSTSSTSKGETL TDTLRNLEAMAADMFVVRHSDSGAAHFIAEHVSPNVAVINGGDGRHAHPTQGMLDMLT IRRHKGNFEQLSVAIVGDILHSRVARSNMLALKTLGCPDIRVIAPRTLLPIGLEEQYG VRVFTNADEGLKDVDVVIMLRLQRERMQGGLLPSEGEFFKLYGLTEKRLKLAKPDAIV MHPGPINRGVEIESAVADGAQSVILNQVTYGIAIRMAVLSMAMSGQNTQRQLEQEDAE " misc_feature complement(444723..445652) /gene="pyrB" /locus_tag="PA0402" /note="aspartate carbamoyltransferase catalytic subunit; Region: pyrB; PRK00856" /db_xref="CDD:234849" gene complement(445715..446227) /gene="pyrR" /locus_tag="PA0403" /db_xref="GeneID:878259" CDS complement(445715..446227) /gene="pyrR" /locus_tag="PA0403" /EC_number="2.4.2.9" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase" /protein_id="NP_249094.1" /db_xref="GeneID:878259" /translation="MSLPNPAELLPRMASDLRAHLAERGIERPRFVGIHTGGIWVAEA LLRELGNQEPLGTLDVSFYRDDFTQNGLHPQVRPSALPFEIDGQHLVLVDDVLMSGRT IRAALNELFDYGRPASVTLVCLLDLNARELPIRPDVVGQTLSLGRDERVKLVGPAPLA LERKVLSSAS" misc_feature complement(445724..446227) /gene="pyrR" /locus_tag="PA0403" /note="bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR; Region: PRK05205" /db_xref="CDD:235365" misc_feature complement(order(445847..445849,445922..445936, 445940..445948,446117..446119,446123..446125)) /gene="pyrR" /locus_tag="PA0403" /note="active site" /db_xref="CDD:206754" gene complement(446339..446773) /locus_tag="PA0404" /db_xref="GeneID:878247" CDS complement(446339..446773) /locus_tag="PA0404" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="Holliday junction resolvase" /protein_id="NP_249095.1" /db_xref="GeneID:878247" /translation="MASDKPLRLLLGFDYGTRQIGVAVGQAVTGQARELCVLKAQNGV PDWNRVEALIKEWQPDAIVVGLPLNMDGSPSEMSERAEKFGRRLNGRFNLPVFTHDER LTTYAAKGERLAQGQRDGYRERPVDALAAALLLEGWLAEHPD" misc_feature complement(446393..446761) /locus_tag="PA0404" /note="Holliday junction resolvase RuvX; Region: PRK00109" /db_xref="CDD:234639" misc_feature complement(order(446402..446404,446468..446470, 446540..446545,446567..446575,446657..446659, 446720..446728)) /locus_tag="PA0404" /note="putative nucleic acid substrate binding site [nucleotide binding]; other site" /db_xref="CDD:438564" gene complement(446773..447342) /locus_tag="PA0405" /db_xref="GeneID:878243" CDS complement(446773..447342) /locus_tag="PA0405" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249096.1" /db_xref="GeneID:878243" /translation="MKQSSPTYLKHHFLIAMPHMADPNFAQTVTYLVEHNEQGAMGLV INRPSGLNLAEVLEQLKPDALPPARCQHIDIYNGGPVQTDRGFVLHPSGLSYQSTLEL GELAMSTSQDVLFAIAAGTGPEKSLISLGYAGWEAGQLEAELSDNAWLTCPADPAILF DLPPEERLSAAAARLGVNLSLLTAQAGHA" misc_feature complement(446776..447342) /locus_tag="PA0405" /note="YqgE/AlgH family protein; Region: PRK00228" /db_xref="CDD:234694" gene complement(447391..448350) /gene="tonB3" /locus_tag="PA0406" /db_xref="GeneID:878224" CDS complement(447391..448350) /gene="tonB3" /locus_tag="PA0406" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="transporter TonB" /protein_id="NP_249097.1" /db_xref="GeneID:878224" /translation="MRHRLFRPPSADFAPRQPPRSAMNAAVLKSPSAAAGVRPADRLG FTLFIAAILHVAFILGVGFSMPAPSQISKTLEITLATFKSDKAPEKADYLAQMNQQGS GTLEHKAAPKTTEVAPFQDNQVKKVAPPATPKQARSEEAPKVAVTTTRQRQQKAPSKT QAQKAEQVAKPAPHFDSTQLSAEIASLEADLAKEQQAYAKRPRIHRLSAASTMRDKGA WYKEDWRKKIERIGNLNYPDEARRQKLYGSLRLLVSINRDGTIYEVQVLESSGEPILD QAAQRIVRLAAPYAPFSGDLADIDRLEIIRTWRFERGDRLSSK" misc_feature complement(447691..>448077) /gene="tonB3" /locus_tag="PA0406" /note="hypothetical protein; Reviewed; Region: PRK11901" /db_xref="CDD:237015" misc_feature complement(447418..447654) /gene="tonB3" /locus_tag="PA0406" /note="Gram-negative bacterial TonB protein C-terminal; Region: TonB_C; pfam03544" /db_xref="CDD:427361" gene complement(448431..449384) /gene="gshB" /locus_tag="PA0407" /db_xref="GeneID:878223" CDS complement(448431..449384) /gene="gshB" /locus_tag="PA0407" /EC_number="6.3.2.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutathione synthetase" /protein_id="NP_249098.1" /db_xref="GeneID:878223" /translation="MSVRLGIVMDPIARINFKKDSSLAMLLAAQARGWSLFYMEQQDL YQKAGVARGRMRPLKVFNDASRWFELEAESDQPLHELDVILMRKDPPFDNEFVYSTYL LEQAERAGALVVNRPQSLRDCNEKFFATQFTQCTPPTMVSRRSDILREFAAEHRDIIL KPLDGMGGSSIFRHREGDPNLSVILETLTQHGSQQIMAQRYLPEIKDGDKRILMIDGE PVPYCLARIPAQGETRGNLAAGGRGVAQPLSERDRWIAAEVGPHLRERGLLFVGLDVI GDYLTEINVTSPTCIREIDQAFDTRIGDKLMDAIAAQLAAR" misc_feature complement(448434..449381) /gene="gshB" /locus_tag="PA0407" /note="glutathione synthetase; Provisional; Region: PRK05246" /db_xref="CDD:235371" gene 449639..450046 /gene="pilG" /locus_tag="PA0408" /db_xref="GeneID:878203" CDS 449639..450046 /gene="pilG" /locus_tag="PA0408" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pilus biosynthesis/twitching motility protein PilG" /protein_id="NP_249099.1" /db_xref="GeneID:878203" /translation="MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDAL AKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFKSTPVIMLSSKDGLFDKAKGRIV GSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS" misc_feature 449660..>450001 /gene="pilG" /locus_tag="PA0408" /note="Two-component response regulator, PleD family, consists of two REC domains and a diguanylate cyclase (GGDEF) domain [Signal transduction mechanisms, Transcription]; Region: PleD; COG3706" /db_xref="CDD:442920" gene 450093..450458 /gene="pilH" /locus_tag="PA0409" /db_xref="GeneID:878198" CDS 450093..450458 /gene="pilH" /locus_tag="PA0409" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="twitching motility protein PilH" /protein_id="NP_249100.1" /db_xref="GeneID:878198" /translation="MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQE KPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVIIVTTKDQETDKVWGKRQGARDYL TKPVDEETLLKTINAVLAG" misc_feature 450093..>450446 /gene="pilH" /locus_tag="PA0409" /note="Two-component response regulator, PleD family, consists of two REC domains and a diguanylate cyclase (GGDEF) domain [Signal transduction mechanisms, Transcription]; Region: PleD; COG3706" /db_xref="CDD:442920" gene 450509..451045 /gene="pilI" /locus_tag="PA0410" /db_xref="GeneID:878186" CDS 450509..451045 /gene="pilI" /locus_tag="PA0410" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="twitching motility protein PilI" /protein_id="NP_249101.1" /db_xref="GeneID:878186" /translation="MSDVQTPFQLLVDIDQRCRRLAAGLPAQQEAVQSWSGIGFRMGG RFFVAPMGEVGEVLHEPRYTQLPGVKTWVKGVANVRGRLLPIMDLCGFLGTELSPLRK QRRVLVVEHLDVFAGLIVDEVFGMQHFPVDTFSEQLPPLEAALQPFIHGVFHREQPWL VFSPHALAQHQGFLDVAV" misc_feature 450608..451021 /gene="pilI" /locus_tag="PA0410" /note="a small regulator protein, unique to the chemotaxis signalling in prokaryotes and archea. CheW interacts with the histidine kinase CheA, most likely with the related regulatory domain of CheA. CheW is proposed to form signalling arrays together with CheA...; Region: CheW; cd00732" /db_xref="CDD:238374" misc_feature order(450740..450757,450839..450841,450845..450847, 451001..451021) /gene="pilI" /locus_tag="PA0410" /note="putative CheA interaction surface [active]" /db_xref="CDD:238374" gene 451130..453178 /gene="pilJ" /locus_tag="PA0411" /db_xref="GeneID:878180" CDS 451130..453178 /gene="pilJ" /locus_tag="PA0411" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="twitching motility protein PilJ" /protein_id="NP_249102.1" /db_xref="GeneID:878180" /translation="MKKINAGNLFAGMRSSSVIAGLFIVLIVSIVLLFANFAYLNTQS NHDKQYIGHAGELRVLSQRIAKNATEAAAGKGEAFKLLKDARNDFEKRWNILVNGDES TSLPPSPEAVKPQMDVVQQDWDGLRKNADSILASEQTVLSLHQVASTLAETIPQLQVE YEEVVDILLENGAPADQVAVAQRQSLLAERILGSVNKVLAGDENSVQAADSFGRDASL FGRVLKGMQEGNAAMSISKVTNAEAVDRLNEIAELFEFVSGSVDEILETSPDLFQVRE AANNIFSVSQTLLDKASQLADGFENLAGGRSINLFAGYALGALALASIILIGLVMVRE TNRRLAETAEKNDRNQAAILRLLDEIADLADGDLTVAATVTEDFTGAIADSINYSIDQ LRELVETINQTAVQVAAAAQETQSTAMHLAEASEHQAQEIAGASAAINEMAVSIDQVS ANASESSAVAERSVAIANKGNEVVHNTITGMDNIREQIQDTSKRIKRLGESSQEIGDI VSLINDIADQTNILALNAAIQASMAGDAGRGFAVVADEVQRLAERSSAATKQIEALVK TIQTDTNEAVISMEQTTSEVVRGARLAQDAGVALEEIEKVSKTLAALIQNISNAARQQ ASSAGHISNTMNVIQEITSQTSAGTTATARSIGNLAKMASEMRNSVSGFKLPEGVEQA " misc_feature 451244..451570 /gene="pilJ" /locus_tag="PA0411" /note="Type IV pili methyl-accepting chemotaxis transducer N-term; Region: PilJ; pfam13675" /db_xref="CDD:433397" misc_feature 451514..453154 /gene="pilJ" /locus_tag="PA0411" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene 453239..454114 /gene="pilK" /locus_tag="PA0412" /db_xref="GeneID:878179" CDS 453239..454114 /gene="pilK" /locus_tag="PA0412" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="methyltransferase PilK" /protein_id="NP_249103.1" /db_xref="GeneID:878179" /translation="MQANGVWSLQPLADMSAAEFRDWQVLLENRTGVVLNEQRRTFLQ ASLTARMRELGIGDYHSYYRQVTDGPRGAVEWATLLDRLTVQETRFFRHPPSFELLER YLGERLRREGMPRPWALWSVGCSSGEEPYSLAMCAAQVLRGQEREDFFGVTGTDISLH ALQRARQANYPARKLEQLEAGLVERYCERQADGSFSVKTILTERVCCARLNVLDLAKA PWSGMDVIFCQNLLIYFRRWRRREILNRLAERLAPGGLLVIGVGEVVDWSHPELEPVA DERVLAFTRKGYSGT" misc_feature 453287..454087 /gene="pilK" /locus_tag="PA0412" /note="Methyltransferase, chemotaxis proteins; Region: MeTrc; smart00138" /db_xref="CDD:214534" gene 454126..461544 /gene="chpA" /locus_tag="PA0413" /db_xref="GeneID:878176" /db_xref="PseudoCap:PA0413" CDS 454126..461544 /gene="chpA" /locus_tag="PA0413" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="chemotactic signal transduction system protein" /protein_id="NP_249104.1" /db_xref="GeneID:878176" /db_xref="PseudoCap:PA0413" /translation="MGDRHDYVALEWVKGEIAETLKQARQALEAFVENPQDPTRMRFC LTYVHQVQGTLQMVEFYGAALLAEEMEQLVQALLDGRVPNQGEALEVLMQAILQLPVY LDRIQTARRDLPMVVLPLLNDLRAARGEKLLSETSLFAPDLSQRQPQLDGEAIAQLRT DELGGLLRKLRQTQQMALVGLLRNQDVATSLGYLARVYARLEGLCREAPLGPLWSIAS GLVEGLANGSVVNSASVRTLLRQLDRELKRLVEQGADGLNQAAPDELVKNLLFYVAKA PSQSPRIRALKEQYRLDEALPDHETVDAERARLAGPDRDAMRSVVGALCEELVRIKDS LDLFVRSDRGHPSELDALLAPLKQIADTLAVLGFGQPRKVILDQLDVIHALAQGRREP SDAILMDVAGALLYVEATLAGMAGPGDERNSEESRLPTTDVAQIHQLVIKEARNGLEQ AKDAIIEFIASQWNHEHLARVPELLTQVRGGLAMIPLERAATLLETCNRYIQEQLLAR KAVPDWQSLDTLADAITSVEYYLERLSEDHASQSDLILDVAEDSLANLGYTLKPNSSA PAEPGLSGPAAIESPAAEPERPEAVVEVAETAEQPPADTAPAEAAREDAPQLASDDNW TLGEVAPDAGEPSLDLALDLPLDDSAEVPPALPEVVEESGQPQSTSAPARSLDDFSLD EIDLSGLDLPADAAPASGPAALADWSLPEQWGLGDDLAQPAQAGETLDLSLEEPALSF DAPLESLEPLPALEPFDGSAEQELVLDALDPLPLDVALPEAEGEVSAWEGSSLEELDL SDLDLPEVQLPEAEAEAPPAAEALASEAPALSLAEVMAAPVQPINPPAQNVPVSLLPP PADEEPVDEELREVFIEEAGEVLETIGRYLPAWKADHDDREALTEVRRAFHTLKGSGR MVRALVIGELAWSIENLFNRVLDRSIAASEPVQRVVDQVVALLPELVEEFAANAQRQR DDVDLLAATAHALAKGEPLPEPPAPDDGGVPPEAGAEQPSSLDNGVQAPPLADAPQAA AEAQSDVELLDPQLLEIFTNEAETHLEALVGFLADCARELPQPVTDALQRALHTLKGS AHMAGILPIAEIATPLEKLVKEYKSNLLAFDLREAELLHDAEQLFRIGLEQVGAQRPL NPIPGSDALLERIEALHQERIASLEAERYSDAGERRDPLLIEAFLVEGMDILLDAEDL LERWHEHPQERQELSALREELSTLDRGARHAELPQVEELCQALLALYDAVEEGRLAVS PAFFEEARQAHEALIGMMDQVAAGLQVTPRPERVAALQELLEAPAAEAVPFIDPESLG ADDFPPEDEEPALPEAVYEEAGAPAEETVPAAPAPAPGRELDEEMVSIFLEEAVDILE SAGQALAQWQAEPGALSSLSALQRDLHTLKGGARMAEIAEIGDLAHELEALYEGLVDR RYQHSPQLAGLLQACHDRLAEQLDQLSAGQPLADPHDLIQSIRRFRQGPVAEAATPGE AESPVEELVAPAVEEPAAPAAEAFEERDPELVEIFLEEGFDILDSAAAALQRWMDDVD NTIELEALQRDLHTLKGGARMAEIGEIGDLAHELEFLYEGLCGGRLRASPALFGLLQR CHDELAEMLEAVRGHRTLPDGQALIAEIRRLRSDPDEQLSVPTSVSLKPLAAKGAAAD ESEILDIFLEEADDLLENLELALGRWDGGNGDAQPLDDLLRILHTLKGGARLAGQTEL GNLAHDLEQHLTDAQQQGAPWPDSLLLDAQSGLEGLQRQVDLLRERLAEDDEAGERPE PAQALVQADDTDRAVASALAELTRLAPAAGAIMAAEAAPPAAPATTLPFVRKAQEAAQ EAASRRAPQELVKVPAELLENLVNLAGETSIFRGRVEQQVSDVGFTLGEMESTIERVR DQLRRLDTETQAQILSRHQADAERAGYEEFDPLEMDRYSQLQQLSRALFESASDLLDL KETLAAKNRDAETLLLQQARVNTELQEGLMRTRMVPFDRLVPRLRRIVRQVAGELGKQ VEFVVGNADGEMDRTVLERIVAPLEHMLRNAVDHGIESGETRRAAGKPEHGTIRLNIG REGGDILLTLSDDGAGIRLDAVRRKAIERGLMSADSDLSDHEVLQFVLESGFSTAEKV TQISGRGVGLDVANSEVKQLGGSVSIQTEPGQGTRFNVRLPFTVSVNRALMVLSGEDL YAVPLNTIEGIVRVSPYELEALYDQRGEAGLDTPSFEYAGQSYELKYLGELLNNGQEP KLVGQSLPLPVILVRSSEHAVAVQVDSLAGSREIVVKSLGPQFAGVAGISGATLLGDG RVVVILDLLATIRSRHALLGQESRRERLALRQEMAASESEQQRPPLVMVVDDSVTVRK VTTRLLERNGMNVLTAKDGVDAIAQLQEHRPDILLLDIEMPRMDGFEVATLVRHDERL GNLPIIMITSRTGEKHRERALGIGVNQYLGKPYQETELLEAIQSLVGQHE" misc_feature <455809..>456234 /gene="chpA" /locus_tag="PA0413" /note="DNA polymerase III subunit gamma/tau; Region: PRK07003" /db_xref="CDD:235906" misc_feature 456715..>457380 /gene="chpA" /locus_tag="PA0413" /note="Chemotaxis protein histidine kinase CheA [Signal transduction mechanisms]; Region: CheA; COG0643" /db_xref="CDD:440408" misc_feature 457246..>457620 /gene="chpA" /locus_tag="PA0413" /note="Chemotaxis protein histidine kinase CheA [Signal transduction mechanisms]; Region: CheA; COG0643" /db_xref="CDD:440408" misc_feature 457681..>458172 /gene="chpA" /locus_tag="PA0413" /note="Chemotaxis protein histidine kinase CheA [Signal transduction mechanisms]; Region: CheA; COG0643" /db_xref="CDD:440408" misc_feature 458209..>458562 /gene="chpA" /locus_tag="PA0413" /note="Chemotaxis protein histidine kinase CheA [Signal transduction mechanisms]; Region: CheA; COG0643" /db_xref="CDD:440408" misc_feature 458689..458985 /gene="chpA" /locus_tag="PA0413" /note="Histidine Phosphotransfer domain, involved in signalling through a two part component systems in which an autophosphorylating histidine protein kinase serves as a phosphoryl donor to a response regulator protein; the response regulator protein is...; Region: HPT; cd00088" /db_xref="CDD:238041" misc_feature order(458818..458820,458827..458832,458875..458877, 458884..458886) /gene="chpA" /locus_tag="PA0413" /note="putative binding surface [active]" /db_xref="CDD:238041" misc_feature 458818..458820 /gene="chpA" /locus_tag="PA0413" /note="active site" /db_xref="CDD:238041" misc_feature 459127..461115 /gene="chpA" /locus_tag="PA0413" /note="Chemotaxis protein histidine kinase CheA [Signal transduction mechanisms]; Region: CheA; COG0643" /db_xref="CDD:440408" misc_feature 461164..461541 /gene="chpA" /locus_tag="PA0413" /note="CheY-like REC (receiver) domain, includes chemotaxis protein CheY and sporulation regulator Spo0F [Signal transduction mechanisms]; Region: CheY; COG0784" /db_xref="CDD:440547" gene 461537..462568 /gene="chpB" /locus_tag="PA0414" /db_xref="GeneID:878169" CDS 461537..462568 /gene="chpB" /locus_tag="PA0414" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="methylesterase" /protein_id="NP_249105.1" /db_xref="GeneID:878169" /translation="MSERVTPRVAVIADTSLQRHVLQQALLGHGYEVVLNADPARVDD AALECAPDLWLVDLTQQDDSPLLDSLLEQDRAPVLFGEGHAPERHTEHYPRWERRLIG KLKRLIGDPSDGVGDSLGALLDEERPPRLEIPGDLAAMPLQAGEAAREVWLLAASLGG PAAVKAFLDALPGGLPIGFLYAQHIDASFEQNLPQAVGRHSQWHVKNVRDGEALRCGE VMVVPVLHELGFHHDGRLKCSQRSWPEPYTPSIDQMMLNLAQQFGPDCGVIVFSGMGS DGSAAAAYVRRQGGEVWTQRADSCVCSSMPDSLREAGYSSFNASPRELAEALVKHLAA RCAPTGVET" misc_feature 461558..>461800 /gene="chpB" /locus_tag="PA0414" /note="Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains [Signal transduction mechanisms, Transcription]; Region: AmiR; COG3707" /db_xref="CDD:442921" misc_feature 461954..462547 /gene="chpB" /locus_tag="PA0414" /note="Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains [Signal transduction mechanisms]; Region: CheB; COG2201" /db_xref="CDD:441803" gene 462565..463071 /gene="chpC" /locus_tag="PA0415" /db_xref="GeneID:878148" CDS 462565..463071 /gene="chpC" /locus_tag="PA0415" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis protein" /protein_id="NP_249106.1" /db_xref="GeneID:878148" /translation="MNQAVIEQDGMSRNTPANPTPDSLTGLLLPLSDRTLLLPNVAVA ELIAYRNPQVAAGLPQWYLGQVAWRDLRLPLLSFEAASSGEQQPVLGSSARVVVINAL GGRPHVKFLALLVQGIPRSVRLDANLAGTAAPLVALELAAVDIGGETARIPDLAGLEE KLADAGLI" misc_feature 462631..463038 /gene="chpC" /locus_tag="PA0415" /note="CheW-like domain. CheW proteins are part of the chemotaxis signalling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and...; Region: CheW_like; cd00588" /db_xref="CDD:238331" gene 463079..463873 /gene="chpD" /locus_tag="PA0416" /db_xref="GeneID:878123" CDS 463079..463873 /gene="chpD" /locus_tag="PA0416" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249107.1" /db_xref="GeneID:878123" /translation="MAGLQHARIGASLEVASASLAGHRFEKHSHDEFVISANLCGLED VWLDGRTFQADSGDLTLYNPGQIQGGGVRDGQPWRFASLYLPAAELASSLDLSSVEFD RPLLRSPALGRELAASIEALLASDRFARERGEERLLEFLGRLLAASGTRLPQRADPGR PAVARLQALLAERLAEPPDLDGMAEQVGLSKYHLLRAFKKATGLSPRQWSMQLRTRRA LGLLRRGLAVGEVAHALGFADQSHLTRYFTSAYGISPGRYQRAVRG" misc_feature 463109..463501 /gene="chpD" /locus_tag="PA0416" /note="AraC-like ligand binding domain; Region: AraC_binding; pfam02311" /db_xref="CDD:396749" misc_feature <463409..463870 /gene="chpD" /locus_tag="PA0416" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene 463949..464560 /gene="chpE" /locus_tag="PA0417" /db_xref="GeneID:878115" CDS 463949..464560 /gene="chpE" /locus_tag="PA0417" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotactic transduction protein ChpE" /protein_id="NP_249108.1" /db_xref="GeneID:878115" /translation="MLAIFLAALLFGFAFNVSPGAVFSETLRRGLTGGFRPALLVQLG SLIGDAVWALLGLTGLALLLGYEQVRIPLTLACAAYLAWLGVQGLRDAWSPPLAAEDA GEQGRNAFGAGAAISLSNPKNVVYWGALGSALAGIVDGTPNQAQSLVFFAGFMLSSLI WCFCCAALVDWLRRNTSLFWHRVSYAGCGVLLLGLAGLALRGL" misc_feature 463985..464494 /gene="chpE" /locus_tag="PA0417" /note="LysE type translocator; Region: LysE; pfam01810" /db_xref="CDD:280058" gene complement(464568..465983) /locus_tag="PA0418" /db_xref="GeneID:878071" CDS complement(464568..465983) /locus_tag="PA0418" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249109.1" /db_xref="GeneID:878071" /translation="MNTVAQPTSQRIARMDTPVTFDWKIRLPDVLGVLRRDYAGRFPQ LASAALETLLERLRDDLPEDFLPALGQELESLGLALVERLDEDDSLNLYVVGAPHSQR LLDALAAQGHNARTLRQENAPEGARAALPAAAPAGLAPASAYICLEHAEHLAPGLAIA RLPGEDSRDLLDLRQWPRLQRLPDGAEETQGALLCRASSADGLHAWVRMTRSGSPYAW LHRSRDLASLTPELPPLPLPPAQSLRQRRTPELAIGLAGDDLLLADRGLFFLYPGFAQ GNDEPRLLFEVPQARRSIENPPAVFTTPDQRVCLLSRGQFFEWREARIQPLPFPVGKD LPADPAQPTSAAPGTIVWLERETLCEGRLDSGEIRSHSLDGLAEGPYLKLQALDGGWL LLAPWLEPHRSRDLAQLWHLESGRALRIRYGELDLEGGLQHWAELPDGRIVVGDHARH VDLGTFESLRQRLLRRRLAPA" gene complement(466018..466740) /locus_tag="PA0419" /db_xref="GeneID:878032" CDS complement(466018..466740) /locus_tag="PA0419" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="16S ribosomal RNA methyltransferase RsmE" /protein_id="NP_249110.1" /db_xref="GeneID:878032" /translation="MRLSRFFVDQPLSLGQHDLPEAQAHYIGRVLRHATGDAVQLFDG SGREYLGELVEVGKKNVRVELREQFAGQPDSPLRIHLGQGLSRGERMDWAIQKATELG VAEITPIVSERCEVRLKDERADKRLQHWRQVAISACEQCGRSSLPLIHPPLALEDWLR GRDDDLRLVLHPVAAPLASHAPPSRLAFLVGPEGGLSDAEVEQAQAAGFHSARLGPRV LRTETAPVVALAVAQQLWGDFA" misc_feature complement(466021..466740) /locus_tag="PA0419" /note="16S rRNA U1498 N3-methylase RsmE [Translation, ribosomal structure and biogenesis]; Region: RsmE; COG1385" /db_xref="CDD:440995" gene complement(466833..468236) /gene="bioA" /locus_tag="PA0420" /db_xref="GeneID:878017" CDS complement(466833..468236) /gene="bioA" /locus_tag="PA0420" /EC_number="2.6.1.62" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA" /protein_id="NP_249111.1" /db_xref="GeneID:878017" /translation="MGLNADWMQRDLNVLWHPCTQMKDHERLPVIPIRRGEGVWLEDF EGKRYIDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHQPVIELSERLVKI TPPGLDRVFYADSGSAGIEVALKMSYHFWLNSGRPRKKRFVTLTNSYHGETIAAMSVG DVALFTETYKSLLLDTIKVPSPDCFLRPDGMCWEEHSRNMFAHMERTLAEGHDEIAAV IVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIA PDFLCLSKALTGGYLPMSAVLTSETIYRGFYDDYQTLRAFLHSHTYTGNPLACAAALA TLDIFEEDKVIEANRALSTHMARATAHLADHPHVAEVRQTGMVLAIEMVQDKASRTPY PWQERRGLKVFQHGLERGALLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIATRD AVSVAVSDFHPDHRDPG" misc_feature complement(466836..468236) /gene="bioA" /locus_tag="PA0420" /note="adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional; Region: PRK07030" /db_xref="CDD:180800" misc_feature complement(order(467385..467387,467463..467468, 467472..467474,467574..467576,467781..467783, 467787..467792,467886..467894)) /gene="bioA" /locus_tag="PA0420" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99735" misc_feature complement(order(467385..467387,467463..467465, 467472..467474,467574..467576,467787..467792, 467886..467891)) /gene="bioA" /locus_tag="PA0420" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature complement(467385..467387) /gene="bioA" /locus_tag="PA0420" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 468410..469900 /locus_tag="PA0421" /db_xref="GeneID:877975" CDS 468410..469900 /locus_tag="PA0421" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249112.1" /db_xref="GeneID:877975" /translation="MSLRWLRAAAFLMLGVFSAVALGKDKQPTAIVVGAGLAGLSAAY ELQKDGWQVTVLEARPQVGGRSGLATSEWVGNQKVQPTLNAYLDTFKLKPVPAPDFVR TPSYLIDGLYYSSSDLALKQPNVAADLKRFESTLDDLSASISDPLNPASSNTLFALDQ MNAARWLDKLNLSPTARLLVNQRIRSRYDEPSRLSLLYLAQQGRAYRGVDDRDLRAAR LPGGSQVLAEAFVKQIKTIKTKSKVSSIVQAKDGVAVKAGSETYKADYVVLAVPLKAL GQIQMTPSLSGTQMSALKGTNYGWRDQILLKFKRPVWDDKSRLSGEIFSDQGLGMIWV EPALKGGANVLINLSGDNARVLQAFGDRQMVDQVLIRMNKFYPKMRGAFAGYEIRRYS ADPGTGGSYLAYGPGQVTRFWRIWEQPLSRVAFAGEHTDALYPGTIEGALRSGKRAAS QVRDLYAGKTPVIEGAPMVAKAEKVAAPTTGGEKKNPFAWFTRLFD" misc_feature 468485..469765 /locus_tag="PA0421" /note="Monoamine oxidase [Amino acid transport and metabolism]; Region: YobN; COG1231" /db_xref="CDD:440844" gene 470081..470650 /locus_tag="PA0422" /db_xref="GeneID:877961" CDS 470081..470650 /locus_tag="PA0422" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249113.1" /db_xref="GeneID:877961" /translation="MQWRNTSSRYGVFSLFLHWGSALVVFGLFGLGLWMRELSYYDPW YHPAPALHKSIGILLAIALLVRIVWRFVSPPPPAPANHGPLTRVASKLGHLALYGLLL AVIVAGYLISTADGEPISVFGWFSVPATLSGLPDQADVAGEIHLYLAWALVVFAVLHA LAALKHHFVDRDPTLKRMLGRSSNDQQPR" misc_feature 470081..470629 /locus_tag="PA0422" /note="Cytochrome b561 [Energy production and conversion]; Region: CybB; COG3038" /db_xref="CDD:442272" gene 470662..471237 /gene="pasP" /locus_tag="PA0423" /db_xref="GeneID:877902" CDS 470662..471237 /gene="pasP" /locus_tag="PA0423" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249114.1" /db_xref="GeneID:877902" /translation="MLKKTLAALALGSALFTAGQAMAADYKIDKEGQHAFIEFRIKHL GYSWLYGRFNDFDGSFTFDEKNPSADKVKVTINTNSVDTNHAERDKHLRSGDFLNVSK NPTATFESTEVKANGDSADITGNLTLNGVTKPVTIKAKLIGQGDDPWGGYRAGFEGSA TLKLKDFGIKMDLGPASQEVELLLSVEGIRQ" misc_feature 470665..471234 /gene="pasP" /locus_tag="PA0423" /note="YceI family protein; Region: PRK03757" /db_xref="CDD:179642" gene complement(471306..471749) /gene="mexR" /locus_tag="PA0424" /db_xref="GeneID:877857" CDS complement(471306..471749) /gene="mexR" /locus_tag="PA0424" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="multidrug resistance operon repressor MexR" /protein_id="NP_249115.1" /db_xref="GeneID:877857" /translation="MNYPVNPDLMPALMAVFQHVRTRIQSELDCQRLDLTPPDVHVLK LIDEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGL AIHQHAEAIMSRVHDELFAPLTPVEQATLVHLLDQCLAAQPLEDI" misc_feature complement(471366..471665) /gene="mexR" /locus_tag="PA0424" /note="helix_turn_helix multiple antibiotic resistance protein; Region: HTH_MARR; smart00347" /db_xref="CDD:197670" gene 472024..473175 /gene="mexA" /locus_tag="PA0425" /db_xref="GeneID:877855" CDS 472024..473175 /gene="mexA" /locus_tag="PA0425" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="multidrug resistance protein MexA" /protein_id="NP_249116.1" /db_xref="GeneID:877855" /translation="MQRTPAMRVLVPALLVAISALSGCGKSEAPPPAQTPEVGIVTLE AQTVTLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEAD YQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQSKAAVEQARINLRYTKV LSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQ LERAGDNAAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLPGM FVHAQLQEGVKQKAILAPQQGVTRDLKGQATALVVNAQNKVELRVIKADRVIGDKWLV TEGLNAGDKIITEGLQFVQPGVEVKTVPAKNVASAQKADAAPAKTDSKG" misc_feature 472033..473157 /gene="mexA" /locus_tag="PA0425" /note="multidrug efflux RND transporter periplasmic adaptor subunit AcrA; Region: PRK15030" /db_xref="CDD:184990" gene 473191..476331 /gene="mexB" /locus_tag="PA0426" /db_xref="GeneID:877852" CDS 473191..476331 /gene="mexB" /locus_tag="PA0426" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="multidrug resistance protein MexB" /protein_id="NP_249117.1" /db_xref="GeneID:877852" /translation="MSKFFIDRPIFAWVIALVIMLAGGLSILSLPVNQYPAIAPPAIA VQVSYPGASAETVQDTVVQVIEQQMNGIDNLRYISSESNSDGSMTITVTFEQGTDPDI AQVQVQNKLQLATPLLPQEVQRQGIRVTKAVKNFLMVVGVVSTDGSMTKEDLSNYIVS NIQDPLSRTKGVGDFQVFGSQYSMRIWLDPAKLNSYQLTPGDVSSAIQAQNVQISSGQ LGGLPAVKGQQLNATIIGKTRLQTAEQFENILLKVNPDGSQVRLKDVADVGLGGQDYS INAQFNGSPASGIAIKLATGANALDTAKAIRQTIANLEPFMPQGMKVVYPYDTTPVVS ASIHEVVKTLGEAILLVFLVMYLFLQNFRATLIPTIAVPVVLLGTFGVLAAFGFSINT LTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLSPREAARKSMGQIQGALVGIAMVLS AVFLPMAFFGGSTGVIYRQFSITIVSAMALSVIVALILTPALCATMLKPIEKGDHGEH KGGFFGWFNRMFLSTTHGYERGVASILKHRAPYLLIYVVIVAGMIWMFTRIPTAFLPD EDQGVLFAQVQTPPGSSAERTQVVVDSMREYLLEKESSSVSSVFTVTGFNFAGRGQSS GMAFIMLKPWEERPGGENSVFELAKRAQMHFFSFKDAMVFAFAPPSVLELGNATGFDL FLQDQAGVGHEVLLQARNKFLMLAAQNPALQRVRPNGMSDEPQYKLEIDDEKASALGV SLADINSTVSIAWGSSYVNDFIDRGRVKRVYLQGRPDARMNPDDLSKWYVRNDKGEMV PFNAFATGKWEYGSPKLERYNGVPAMEILGEPAPGLSSGDAMAAVEEIVKQLPKGVGY SWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLA TSMRGLSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEACRMRLRP IVMTSLAFILGVVPLAISTGAGSGSQHAIGTGVIGGMVTATVLAIFWVPLFYVAVSTL FKDEASKQQASVEKGQ" misc_feature 473191..476322 /gene="mexB" /locus_tag="PA0426" /note="The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Region: 2A0602; TIGR00915" /db_xref="CDD:273335" gene 476333..477790 /gene="oprM" /locus_tag="PA0427" /db_xref="GeneID:877851" CDS 476333..477790 /gene="oprM" /locus_tag="PA0427" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="outer membrane protein OprM" /protein_id="NP_249118.1" /db_xref="GeneID:877851" /translation="MKRSFLSLAVAAVVLSGCSLIPDYQRPEAPVAAAYPQGQAYGQN TGAAAVPAADIGWREFFRDPQLQQLIGVALENNRDLRVAALNVEAFRAQYRIQRADLF PRIGVDGSGTRQRLPGDLSTTGSPAISSQYGVTLGTTAWELDLFGRLRSLRDQALEQY LATEQAQRSAQTTLVASVATAYLTLKADQAQLQLTKDTLGTYQKSFDLTQRSYDVGVA SALDLRQAQTAVEGARATLAQYTRLVAQDQNALVLLLGSGIPANLPQGLGLDQTLLTE VPAGLPSDLLQRRPDILEAEHQLMAANASIGAARAAFFPSISLTANAGTMSRQLSGLF DAGSGSWLFQPSINLPIFTAGSLRASLDYAKIQKDINVAQYEKAIQTAFQEVADGLAA RGTFTEQLQAQRDLVKASDEYYQLADKRYRTGVDNYLTLLDAQRSLFTAQQQLITDRL NQLTSEVNLYKALGGGWNQQTVTQQQTAKKEDPQA" misc_feature 476357..477730 /gene="oprM" /locus_tag="PA0427" /note="efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; Region: outer_NodT; TIGR01845" /db_xref="CDD:273830" gene complement(477886..479805) /locus_tag="PA0428" /db_xref="GeneID:877822" CDS complement(477886..479805) /locus_tag="PA0428" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase" /protein_id="NP_249119.1" /db_xref="GeneID:877822" /translation="MSFSSLGLSEALARAVEAAGYSQPTPVQQRAIPAVLQGRDLMVA AQTGTGKTGGFALPVLERLFPAGHPDREHRHGPRQARVLVLTPTRELAAQVHDSFKVY ARDLPLNSTCIFGGVGMNPQIQALAKGVDVLVACPGRLLDLAGQNKVDLSHVEILVLD EADRMLDMGFIHDVKKVLAKLPPKRQNLLFSATFSKDIVDLANKLLHNPERIEVTPPN TTVERIEQRVFRLPAPQKRALLAHLVTVGAWEQVLVFTRTKHGANRLAEYLTKHGLPA AAIHGNKSQNARTKALADFKANDVRILVATDIAARGLDIDQLPHVVNYELPNVEEDYV HRIGRTGRAGRSGEAISLVAPDEEKLLKAIEKMTRQRIPDGDAQGFDPEAVLPEVAQP EPREAPQKQPRRDKERRSSRERKPKDAQASNPDSNVAAAQDGTEKPAGKRRRRGGKNK ENREAGQAQQPRQSREARPAKPNRPPEVDGNRDPEEFLDDDFDNFGNRADYVSPYQGQ ENKGRGRRGGQQKPQGGTGQQGRGQGQGQARGKSQGAAQGGARGQGAGQGKAKKPRAG KPRGQGRENASRMSDAPLREPSEYGTGKQPSRQPVVINKRDLVRMDRFPTAEQLDELE PRRKGERPALLTRNR" misc_feature complement(478534..479805) /locus_tag="PA0428" /note="Superfamily II DNA and RNA helicase [Replication, recombination and repair]; Region: SrmB; COG0513" /db_xref="CDD:440279" misc_feature complement(<478261..478788) /locus_tag="PA0428" /note="transcription termination factor Rho; Provisional; Region: PRK12678" /db_xref="CDD:237171" gene complement(480056..481126) /locus_tag="PA0429" /db_xref="GeneID:877779" CDS complement(480056..481126) /locus_tag="PA0429" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249120.1" /db_xref="GeneID:877779" /translation="MANSRKHLIYLVYGRQTYHQEALFSIASAFAHLRDGAAHGLTVR VYTDDPSPYAGLPVQVREVTAEELVAWCQPHGYHFRAKHVALRDALEEADQALLIDTD TFFHSSPLRLFDRIQPGSLLCNAIGARYGEHRNFPLYRDLSPYLFERGWADDEMHQLN SGVIGLPREEAKILDRSLELMDELYPIANGAYTLEEFVLAVAAHKRLELVGCTDLIHH YWSRKQLFRAKIQAWLCKHGSSLLSAAALDDTLKVTDRLPRPPRAKRLLYKLGTLPLP APMRQFSIELLYGCHEYSNEFDRACGPVWWEKAATNAIERYPQEPIAEQIEDWLNHSL LRNLLGSRANEIRQHLRQRDLL" gene complement(481196..482068) /gene="metF" /locus_tag="PA0430" /db_xref="GeneID:877765" CDS complement(481196..482068) /gene="metF" /locus_tag="PA0430" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="5,10-methylenetetrahydrofolate reductase" /protein_id="NP_249121.1" /db_xref="GeneID:877765" /translation="MVASKEPIMSQSERRFSFEFFPAKTEAGHEKLLATARNLAGYKP DFFSCTYGAGGSTRDRTLSTVLQLDGEVKVPTAPHLSCVGDSKAELRELLGRYREAGI RRIVALRGDLPSGMGMASGELRYANELVDFIRTETGDHFHIEVAAYPEVHPQARSFED DLANFVRKVKAGASSAITQYFFNADAYFYFVERVAKLGVDIPVVPGIMPITNYSKLAR FSDACGAELPRWIRKQLEAYGDDSRSIQAFGEQVISEMCERLLEGGAPGLHFYTLNQA DPSLAIWKNLQLPR" misc_feature complement(481205..482047) /gene="metF" /locus_tag="PA0430" /note="5,10-methylenetetrahydrofolate reductase [Amino acid transport and metabolism]; Region: MetF; COG0685" /db_xref="CDD:440449" gene complement(482111..482665) /locus_tag="PA0431" /db_xref="GeneID:877761" CDS complement(482111..482665) /locus_tag="PA0431" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249122.1" /db_xref="GeneID:877761" /translation="MSAPTMSTHLADHYNQAWLFAARAHRNQTLSGSPLPYLVHLGMV ANELLAADRDGAIERLGETLQIAVLHDTLEDTATSPEELRQQFGEFVCAGVQALSKRV GDGPKRSLDDYLQALAEGPAQYALVKLCDRITNLQPPPQTWNQDKIANYHQESQLILA RLGHAHAATARRLREKIEHYRQYY" misc_feature complement(482174..482617) /locus_tag="PA0431" /note="Metal dependent phosphohydrolases with conserved 'HD' motif; Region: HDc; cl21469" /db_xref="CDD:473873" gene complement(482706..484115) /gene="sahH" /locus_tag="PA0432" /db_xref="GeneID:877746" CDS complement(482706..484115) /gene="sahH" /locus_tag="PA0432" /EC_number="3.3.1.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="adenosylhomocysteinase" /protein_id="NP_249123.1" /db_xref="GeneID:877746" /translation="MSAVMTPAGFTDYKVADITLAAWGRRELIIAESEMPALMGLRRK YAGQQPLKGAKILGCIHMTIQTGVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAG IPVFAWKGETEEEYEWCIEQTILKDGQPWDANMVLDDGGDLTEILHKKYPQMLERIHG ITEETTTGVHRLLDMLKNGTLKVPAINVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHL LSGKQALVIGYGDVGKGSSQSLRQEGMIVKVAEVDPICAMQACMDGFEVVSPYKNGIN DGTEASIDAALLGKIDLIVTTTGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMR KNWAWEEVKPQVHKIHRTGKDGFDAHNDDYLILLAEGRLVNLGNATGHPSRIMDGSFA NQVLAQIHLFEQKYADLPAAEKAKRLSVEVLPKKLDEEVALEMVKGFGGVVTQLTPKQ AEYIGVSVEGPFKPDTYRY" misc_feature complement(482712..484082) /gene="sahH" /locus_tag="PA0432" /note="S-adenosyl-L-homocysteine hydrolase; Region: AdoHcyase; pfam05221" /db_xref="CDD:461594" gene 484404..484838 /locus_tag="PA0433" /db_xref="GeneID:877638" CDS 484404..484838 /locus_tag="PA0433" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249124.1" /db_xref="GeneID:877638" /translation="MLECAVMRIAPISRSPLLQWLSFALCACVLVNALACGVLHLQAL GVGSDKGQKASVGLFCVAGASQWLSLDPDDGAAGDPAPINPQLPMSCPMCSALVLFVA LGVIWSWRLQRRRHARFRPPATREPVPPRYVWPPANPRASPA" misc_feature 484485..484832 /locus_tag="PA0433" /note="Protein of unknown function (DUF2946); Region: DUF2946; pfam11162" /db_xref="CDD:431693" gene 484964..487156 /locus_tag="PA0434" /db_xref="GeneID:877602" CDS 484964..487156 /locus_tag="PA0434" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249125.1" /db_xref="GeneID:877602" /translation="MKKHSTARRVLALGLNLTLAGVPALLWADEEPTELPALTVSAGA AGETPPALDLDDSAGGGSRLGLSLRETPGSVSVANRASFERRGLRSTQDIANSLPGVN ASAPPGFGGFVTYRGFSSNQVNQLFNGIPVQYSSAMRPLDDWIVDRVELVGGPSSFLN GAGAVGGSLDYISKLADRYGDFMEGRVRYGSYDDSEVAFGFNQALGIGPEPKHFVRLD VSRSGGNGYVDRNSRESWNVAFSLLSDLTPDLSHTLALEYQDEQEDSPYWGTPVLNPY AGELKIDKSRRRENYNVADGRYEQRVRWLRSILEYRVSDSTRWRNTFYHYDAERDYRN LETYRYNADNSGVVRSNAFLQRHDQQLNGNRFELQHSQPLFGLASDWALGFDYSINKQ TRFPSTASGPFGTVDPASFEPGHFYDLPGMRPGHRKDRSNEVRTSALFAENRLGLTDE LSLVTGLRYDHLDLDVRNHRVPDKDNPAHFERRWDVVTGRAGLVYQFTPHANVYLQYS TAADPPGGVLTSASFGQVRDYDLSTGDQWELGSKFDFLDGRGSATLAAYRIVRRDFSV ADPNNPNLSVPVGQQTSRGIEAAASLRITPKLLAEGNFAWVDAQYDEFTENVGGVAVS RKGKTPPNVPERVGNLWLTYDFDPAWQGGVDARYVSSVYANNANTWHVPSYTVYGTFL SYRLDERTRITGRVRNLTDEVYARFVQSTPLYYVGDPRTFELSVQTRF" misc_feature 485150..487153 /locus_tag="PA0434" /note="Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; Region: Fiu; COG4774" /db_xref="CDD:443806" gene 487167..488645 /locus_tag="PA0435" /db_xref="GeneID:877601" CDS 487167..488645 /locus_tag="PA0435" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249126.1" /db_xref="GeneID:877601" /translation="MKRYLYLWHRWLGIGCCLLMVLWFVSGMVMLYVGYPKLTPLERL AHLPELDGCEACVPLRTALAGSDGKTPRSIRLASVGGLPTYLLDDADGRTRALAARDG RPLAVDADRVLASARAFSGEVPMQLQGRFEEDAWTHTRNLDPHRPLWRVQTADEQGRL LYLSSQTGEVVRDASRRERAWNWLGAWLHWLYPLRGGWFDGQWANLVIGLSLLATLVT VLGILVGLLRWRFRKPYRSGSRSPYAGGFQRWHHLAGLLFGALVLSWIFSGLMSMNPW NLFGRGTPLDLAAYQGGSWDRALPAGLEADAVLRRLRAAGLRVRELEWRALDGEPYAL GRSASGNSLLLTADGEILRELPADRLLAAARALLPGVPMQAERLERYDFYYYPREEHS MMGYLERRLPVWRLRFDDSRHTWVHLDPYSGAVVGVLDDGRRGSRWLFSLLHSWDWLP LLTRRPLWDLWMLGFSLGGLVVCASGCWIGWRRLRGRRPKRR" misc_feature 487167..488609 /locus_tag="PA0435" /note="PepSY-associated TM region [Function unknown]; Region: PiuB; COG3182" /db_xref="CDD:442415" gene 488730..489350 /locus_tag="PA0436" /db_xref="GeneID:877591" CDS 488730..489350 /locus_tag="PA0436" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249127.1" /db_xref="GeneID:877591" /translation="MGTHKIEIRRRNVEKILLAAEKVFAEKGYAGTSMGNIAEEAELP RSNLHYYFSTKDELYRDVLLGLLEVWKQDALCFEMFDDPRVVLTSYIRAKMNHSRTRP HGSKVWANEIMHGAPLLGATLDDSLYEWAKMKEAKIRQWVEEKRILSIEPSSLLYMIW ASTQHYADFGYQVEVLNGHQPLSDMQFERAVQTVTSVVLRGIGLEP" misc_feature 488775..488915 /locus_tag="PA0436" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:425684" misc_feature 488916..489344 /locus_tag="PA0436" /note="YcdC-like protein, C-terminal region; Region: TetR_C_3; pfam08362" /db_xref="CDD:429946" gene complement(489387..490658) /gene="codA" /locus_tag="PA0437" /db_xref="GeneID:877586" CDS complement(489387..490658) /gene="codA" /locus_tag="PA0437" /EC_number="3.5.4.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytosine deaminase" /protein_id="NP_249128.1" /db_xref="GeneID:877586" /translation="MLIDNLRLRGREGLWQLRVADGRIAALVPMEQAADDAGERLDGA GGLAVPPFIEPHIHLDTTQTAGQPEWNRSGTLFEGIERWAQRKALLSHEDVKQRAWQT LKWQIANGVQHVRSHVDVSDPTLTALKAMLEVRGEVAPWVDLQIVAFPQEGILSYPNG LELLEESLRLGADVVGAIPHFEFTRELGVESLHKAIDLAKRYDLPVDVHCDEIDDEQS RFLETLAMLAHRDGLGARVTASHTTAMHSYNGAYTSRLFRLLKLSGINFVANPLVNIH LQGRFDDYPKRRGITRVKELLGAGINTCFGHDDVFDPWYPLGTANMLQVLHMGLHVTQ MMGYDEIDGGLDLITRNSARTLGLREYGIEVGHPANLLVLPARDGFDAVRRQVPVRYS IRGGRLLAETVPAQTTVFLEQAEAVDFTRAS" misc_feature complement(489396..490658) /gene="codA" /locus_tag="PA0437" /note="cytosine deaminase; Provisional; Region: PRK09230" /db_xref="CDD:181713" misc_feature complement(order(489735..489737,489936..489938, 490023..490025,490032..490034,490485..490487, 490491..490493)) /gene="codA" /locus_tag="PA0437" /note="active site" /db_xref="CDD:238618" protein_bind complement(490070..490082) /gene="codA" /locus_tag="PA0437" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(490648..491898) /gene="codB" /locus_tag="PA0438" /db_xref="GeneID:877581" CDS complement(490648..491898) /gene="codB" /locus_tag="PA0438" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytosine permease" /protein_id="NP_249129.1" /db_xref="GeneID:877581" /translation="MSADSNYSQQPVPLAARKSALALSVVMLGLTFFSASMWTGGTLG TGLSYDDFFLAVLLGNLMLGLYTAILGFIGARTGLSTHLLAHYSFGSKGSWLPSALLG GTQVGWFGVGVAMFAIPVAKATGLDVNLLILVSGALMTLTVFFGIAGLTLLSAIAVPA IVVLGSYSVWLAVRDAGGLAALQQVTPSAPLSLSTAIALVVGSFVSAGTLTADFVRFG RSARTAVVVCLVAFFLGNSLMFIFGAAGAAAVGKSDISDVMIAQGLLIPAILVLGLNI WTTNDNALYASGLGFANITGLSSRFLAMLNGALGTLAALWLYNHFVGWLTFLSAAIPP IGGVIIADYLSRRRRYRQHPCADIQAINWAAILAVACGTAAGHWLPGIVPVNAVLGAA IAYLLLNPLLSRSPNKPEEVLHAD" misc_feature complement(490666..491874) /gene="codB" /locus_tag="PA0438" /note="cytosine permease; Provisional; Region: codB; PRK11017" /db_xref="CDD:236821" misc_feature complement(order(491062..491067,491074..491076, 491803..491805,491812..491814)) /gene="codB" /locus_tag="PA0438" /note="Na binding site [ion binding]; other site" /db_xref="CDD:271377" misc_feature complement(order(491047..491049,491059..491061, 491281..491283,491287..491292,491563..491565, 491575..491577,491800..491802)) /gene="codB" /locus_tag="PA0438" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:271377" gene complement(492080..493357) /locus_tag="PA0439" /db_xref="GeneID:877580" CDS complement(492080..493357) /locus_tag="PA0439" /EC_number="1.3.1.1" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="dihydropyrimidine dehydrogenase" /protein_id="NP_249130.1" /db_xref="GeneID:877580" /translation="MMADLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVV WKTLGEDPAAVNVSSRYSAHFGPNRQVQGINNIELITDRSLEINLREIAQVKKDWPDR ALIVSLMVPCVEESWKYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEM VTRWCKAHCSLPVIVKLTPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVA LPVVGTQSTHGGYCGSAVKPIALNMVAEIARDPQTRGLPICGIGGIGSWRDAAEFVAL GCGAVQVCTAAMLHGFRIVEDMQDGLARWMDSHGYQRLSDFSGGAVGNTTDWKYLDIN YQVIARIDQDACIGCGRCHIACEDTSHQAIASLPRADGTHRYEVIDAECVGCNLCQIT CPVENCIEMVPQDTGKPYLNWTQDPRNPYREAS" misc_feature complement(492086..493354) /locus_tag="PA0439" /note="NAD-dependent dihydropyrimidine dehydrogenase subunit PreA; Region: PRK08318" /db_xref="CDD:236237" gene complement(493354..494721) /locus_tag="PA0440" /db_xref="GeneID:877574" CDS complement(493354..494721) /locus_tag="PA0440" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_249131.1" /db_xref="GeneID:877574" /translation="MIDSLNHLPRPDAGADTLAERFADLAPPLNARQAALESARCLYC YDAPCVNACPTEIDIPGFIRSIAQENVQGAAQKILSANILGGSCARVCPTEILCQRAC VRNNAQECAPVLIGQLQRYALDHAGFDEHPFKRSPATGKRIAVVGAGPAGLSCAHRLA MHGHDVVLFEARTKAGGLNEYGIARYKLVDDFARREVEFLLQIGGIELRHGQRLGDNL ALGALHDEYDAVFLGIGLAASKRLGLEDEDAPGLLAATDYIRELRQSDDLLDLPVADR CIVIGAGNTAIDMAVQMSRLGARDVNLVYRRGFEEMGATGHEQEIAKASQVRLLTWAR PERVLLDEHGRVRGMRFARTRLENGRLGDTGEHFELAADAIFKAIGQAFEGASLGDPL AAQLRRDGERIQVDGQMRTSIPGIYAGGDCVALGEDLTVQAVQHGKLAAEAIHAQLML NVEAA" misc_feature complement(493375..494721) /locus_tag="PA0440" /note="dihydropyrimidine dehydrogenase subunit A; Provisional; Region: PRK11749" /db_xref="CDD:236967" gene complement(494816..496255) /gene="dht" /locus_tag="PA0441" /db_xref="GeneID:882285" CDS complement(494816..496255) /gene="dht" /locus_tag="PA0441" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="D-hydantoinase/dihydropyrimidinase" /protein_id="NP_249132.1" /db_xref="GeneID:882285" /translation="MSLLIRGATVVTHEESYRADVLCANGLIQAIGENLETPSGCDVL DGGGQYLMPGGIDPHTHMQLPFMGTVASEDFFSGTAAGLAGGTTSIIDFVIPNPRQSL LEAFHTWRGWAQKSAADYGFHVAITWWSDEVAREMGELVAQHGVNSFKHFMAYKNAIM AADDTLVASFERCLELGAVPTVHAENGELVFHLQQKLLAQGLTGPEAHPLSRPPQVEG EAASRAIRIAETLGTPLYLVHISSREALDEIAYARAKGQPVYGEVLAGHLLLDDSVYR HPDWATAAGYVMSPPFRPVEHQEALWRGLQSGNLHTTATDHCCFCAEQKAMGRDDFSK IPNGTAGIEDRMALLWDAGVNSGRLSMHEFVALTSTNTAKIFNLFPRKGAIRVGADAD LVLWDPQGSRTLSAATHHQRVDFNIFEGRTVRGIPSHTISQGKLLWAAGDLRAEPGAG RYVERPAYPSVYEVLGRRAERQRPVAVER" misc_feature complement(494870..496255) /gene="dht" /locus_tag="PA0441" /note="phenylhydantoinase; Validated; Region: PRK08323" /db_xref="CDD:236240" misc_feature complement(order(495104..495106,495119..495121, 495134..495136,495485..495490,495494..495499, 495578..495580,495587..495589,495599..495601, 495611..495613,495680..495682,495689..495691, 495698..495700,495761..495763,496163..496168, 496205..496207,496211..496216)) /gene="dht" /locus_tag="PA0441" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:238639" misc_feature complement(order(495308..495310,495539..495541, 495707..495709,495806..495808,496073..496075, 496079..496081)) /gene="dht" /locus_tag="PA0441" /note="active site" /db_xref="CDD:238639" protein_bind complement(495778..495790) /gene="dht" /locus_tag="PA0441" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(496362..496478) /locus_tag="PA0442" /db_xref="GeneID:879371" CDS complement(496362..496478) /locus_tag="PA0442" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249133.1" /db_xref="GeneID:879371" /translation="MVRTLTILVIFIFNYLKSISYKLKQPFENNLAQSMISI" gene 496871..498361 /locus_tag="PA0443" /db_xref="GeneID:880435" CDS 496871..498361 /locus_tag="PA0443" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_249134.1" /db_xref="GeneID:880435" /translation="MQQSRSEVTERDGLVELSAGSDVLDSPRYNHDIAPTRVEQRTWN RWHITALWIGMSICVPTYTLGGVLTAYFGLSVGEALLAILLANLVVLIPLTLNAFAGT RYGIPFPVLLRASFGIIGSNVPCLIRAVVACGWFGIQTLFGGLAIHLFLGSIFPAWKA LGGTGEVIGFLLFWGLNLWVVLRGAESIKWLETLSAPLLVLVGLGLLVWALPHISVSE LLAQPPKRPEGASVTGYFMAGLTAMVGFWATLSLNIPDFSRYARSQKDQILGQIFGLP LTMFLFAALGVVMTAASASLVGETVSDPVSLIGHIPSPGWVAVAMALIIVATLSTNTA ANIVSPTNDFQNIAPKLIGRTRAVWLTGFIGLALMAHELLKKLGWIVSDLSLESVYSN WLLGYSSLLGPIAGIMVVDYFLVRRQRLDLAGLYRDDVYPAWNWPGFAAFAVPVALTV MALGNRQFHWFYDYGWFTGSLLGGALYYGLCGRRARSPAALAKPLP" misc_feature 496943..498319 /locus_tag="PA0443" /note="uncharacterized nucleobase-cation-symport-1 (NCS1) transporter subfamily, YbbW-like; solute-binding domain; Region: SLC-NCS1sbd_YbbW-like; cd11485" /db_xref="CDD:271378" misc_feature order(497030..497032,497039..497041,497849..497851, 497858..497863) /locus_tag="PA0443" /note="Na binding site [ion binding]; other site" /db_xref="CDD:271378" misc_feature order(497042..497044,497273..497275,497285..497287, 497606..497611,497615..497617,497864..497866, 497876..497878) /locus_tag="PA0443" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:271378" gene 498420..499703 /locus_tag="PA0444" /db_xref="GeneID:880960" CDS 498420..499703 /locus_tag="PA0444" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="allantoate amidohydrolase" /protein_id="NP_249135.1" /db_xref="GeneID:880960" /translation="MSTARNVLQSTQRHIDGQRLWQSLMDLARLGATAKGGVCRLALS DLDRQARDLFVQWCEAAGCTVSVDRVGNIFARRPGRNPDLPPVMTGSHIDTQPTGGKF DGCFGVMAGLEVIRTLNDLGVETEAPLEVVVWTNEEGSRFAPCMMGSGVFAGKFTLEE TLAKRDADGVSVGEALDAIGYAGARDCLGHPVGAYFEAHIEQGPILEDEEKTIGVVLG ALGQKWFDLSLRGVEAHAGPTPMHLRKDALVGAAAVVEAVNRAALGHQPHACGTVGCL HAYPGSRNVIPGEVKMTLDFRHLQPERLDSMIAEVRQVIAATCEKHGLQYELVPTADF PPLYFDQGCVGAVREAAQALGMPQMDIVSGAGHDAIFLAELGPAGMIFVPCENGISHN EIENASPDDLAAGCAVLLRAMLKASEAIAGGRLAA" misc_feature 498459..499676 /locus_tag="PA0444" /note="allantoate amidohydrolase; Reviewed; Region: PRK09290" /db_xref="CDD:236456" gene complement(500104..501120) /locus_tag="PA0445" /db_xref="GeneID:879390" CDS complement(500104..501120) /locus_tag="PA0445" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_249136.1" /db_xref="GeneID:879390" /translation="MNLSRIGLDLAKQVFQVHGVDRHEHVVCRRQLKRAQVRDFFRQL PPCLVAMEACGSAHYWARELRELGHTVRLIAPQFVKPYVKGDKHDAHDAEAICEAASR PSMRYVPVKSAEQQAVQSMHRVRSRLVRARTALCNEVRGLLGEFGLIATRRGRAATMA LLETVMATEPAPLPAPMGELLRELKDELQTLEARIARLERQIQAHVRGDARIQRLLAV EGIGPISASAVAASAGDARQFRTGRQFAAWLGLVPRQHSTGGQQRLGNISKRGDTYLR TLLIHGARAVVRCCANKTDARSRWLQGLLQRRPANVVAVALANKNARILWALLSRETC YRPG" misc_feature complement(500122..501105) /locus_tag="PA0445" /note="IS110 family transposase; Region: transpos_IS110; NF033542" /db_xref="CDD:468073" gene complement(501376..502599) /locus_tag="PA0446" /db_xref="GeneID:880393" CDS complement(501376..502599) /locus_tag="PA0446" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249137.1" /db_xref="GeneID:880393" /translation="MPGALSHIRVLDLSRVLAGPWAGQILADLGAEVIKIERPGSGDD TRAWGPPFLKDAEGNDTSEAAYYLSANRNKKSVTVDFTQPEGQRIVRELAAKADILLE NFKVGGLKAYGLDYESLKQVNPKLIYCSITGFGQSGPYAKRAGYDFMIQGLGGLMSLT GRADNEEGAGPVKVGVALTDILTGLYSSTAVLAALAHRDVSGIGQHIDMALLDVQVAC LANQTLNYLTTGVPPRRLGNAHPNIVPYQDFPTADGDMILTVGNDSQFRKFAELADHP EWADDPRFATNKARVANREVLIPLIRQATVLHTTAEWILSLERAGVPCGPINDLAQVF ADPQVQARGLRVELPHPLAGTVPQVASPIRLSETPVEYRNPPPTLGQHTDEVLETLLG LDAAALERLRDGKVI" misc_feature complement(501379..502599) /locus_tag="PA0446" /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]; Region: CaiB; COG1804" /db_xref="CDD:441409" gene complement(502719..503900) /gene="gcdH" /locus_tag="PA0447" /db_xref="GeneID:880534" CDS complement(502719..503900) /gene="gcdH" /locus_tag="PA0447" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutaryl-CoA dehydrogenase" /protein_id="NP_249138.1" /db_xref="GeneID:880534" /translation="MATKASFNWEDPLLLDQQLTEEERMVRDSAQQFAQDKLAPRVLE AFRHEQTDPKIFREMGETGLLGATIPEAYGGSGLNYVCYGLIAREVERVDSGYRSMMS VQSSLVMVPIHEFGNEATRQKYLPKLASGEYIGCFGLTEPNHGSDPGSMVTRAKKVDG GYRLSGSKMWITNSPIADVFVVWAKDDEGQIRGFVLEKGWEGLSAPAIHGKVGLRASI TGEIVMDNVFVPEENAFPEVRGLRGPFTCLNSARYGISWGALGAAEFCWHTARQYVLD RQQFGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVEITSIMKRNSCG KALDIARLARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHALILGRAQTGIQAF F" misc_feature complement(502725..503882) /gene="gcdH" /locus_tag="PA0447" /note="Glutaryl-CoA dehydrogenase; Region: GCD; cd01151" /db_xref="CDD:173840" misc_feature complement(order(502773..502775,502779..502781, 502800..502802,503385..503387,503391..503393, 503463..503468,503481..503486,503490..503492)) /gene="gcdH" /locus_tag="PA0447" /note="FAD binding site [chemical binding]; other site" /db_xref="CDD:173840" misc_feature complement(order(502785..502790,503145..503147, 503154..503159,503178..503180,503463..503465)) /gene="gcdH" /locus_tag="PA0447" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:173840" misc_feature complement(502785..502787) /gene="gcdH" /locus_tag="PA0447" /note="catalytic base [active]" /db_xref="CDD:173840" gene 504121..505029 /locus_tag="PA0448" /db_xref="GeneID:881014" CDS 504121..505029 /locus_tag="PA0448" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249139.1" /db_xref="GeneID:881014" /translation="MRRKIPSTAALVSFESAARHESFTKAAEELSLTQSAICRQIATL EEFLGVELFRRSRRGVKLTEAGLSYSRRVAVRLDAVERDTLAVMGHQGGGAIELAVVP TFGTQWLLPRLKRFQRLHPEVTINLTNRTRPFLFADTEFDAALYFGDADWSGTVSHFL MRENPVPVCSPELLGGRRTLSAEQVAGLPLMQQSTRPYAWRQWFHSQGLNVAHDMSGP RYELFSMLAQAAMHGMGVALIPPFLIQDELADGRLIVPMQHAYLSENAYYLIIPERRV ESAMLNAFRDWLVEEARQYREANGLG" misc_feature 504160..>504501 /locus_tag="PA0448" /note="selenium metabolism-associated LysR family transcriptional regulator; Region: LysR_Sec_metab; NF040786" /db_xref="CDD:468737" misc_feature 504406..504984 /locus_tag="PA0448" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators GcdR-like, contains the type 2 periplasmic binding fold; Region: PBP2_GcdR_like; cd08481" /db_xref="CDD:176170" misc_feature order(504406..504426,504430..504483,504487..504507) /locus_tag="PA0448" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176170" misc_feature order(504421..504426,504430..504432,504781..504789, 504847..504849) /locus_tag="PA0448" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176170" gene 505047..505586 /locus_tag="PA0449" /db_xref="GeneID:881113" CDS 505047..505586 /locus_tag="PA0449" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="acyl-CoA thioesterase" /protein_id="NP_249140.1" /db_xref="GeneID:881113" /translation="MAQAGRAAPGTGPIRRVPRSRGGDTAGHPPRRPGWRPWGTTPGV HMNFHTRKWVKPEDLNPNGTLFGGSLLRWIDEEAAIYAIIQLGNQRVVTKYISEINFV SSARQGDIIELGITATDFGRTSLTMTCHVRNKITRKSILTIDKMVFVNLGPDGLPAPH GKTEITYIKDQFKEDEVLP" misc_feature 505188..505574 /locus_tag="PA0449" /note="Acyl-CoA hydrolase [Lipid transport and metabolism]; Region: YciA; COG1607" /db_xref="CDD:441215" gene complement(505629..507251) /locus_tag="PA0450" /db_xref="GeneID:881068" CDS complement(505629..507251) /locus_tag="PA0450" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phosphate transporter" /protein_id="NP_249141.1" /db_xref="GeneID:881068" /translation="MTSDVLPADAVASAAGNARKPHLEQRPGRLTALVFFAVLATGLL FSAYSLMQDVDDVGSTITTWTPFLLLGVALLIALGFEFVNGFHDTANAVATVIYSHSL PPHFAVVWSGCFNFLGVLLSSGAVAFGIIALLPVELILQVGSSAGFAMVFALLIAAIL WNLGTWWLGLPASSSHTLIGSIIGVGVANALMHGRDGTSGVDWGQATKVGYSLLLSPL IGFACAALLLLALRLLVKNRALYKAPKGKAPPPWWIRGLLILTCTGVSFAHGSNDGQK GMGLIMLILVGTLPMAYALNRTMPADQAVQFAAVADVTQQALVKSAPQPAPADPRQVL SDYVRSKQASPELIPALAALTGSIGQEVKGYGAFSRVPAEAMGNVRNDMYLTSEAIRL MDKDGVGRFDADTRGKLQAFKQKIDDATKFIPLWVKIAVAIALGLGTMVGWKRIVVTV GEKIGKTHLTYAQGASAETVAMLTIGAADLYGLPVSTTHVLSSGVAGTMAANGSGLQW KTIRNLLMAWVLTLPAAILLSASLYWLLTRLF" misc_feature complement(505635..507050) /locus_tag="PA0450" /note="Phosphate transporter family; Region: PHO4; cl27575" /db_xref="CDD:474944" protein_bind 507439..507451 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 507631..508962 /locus_tag="PA0451" /db_xref="GeneID:881211" CDS 507631..508962 /locus_tag="PA0451" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249142.1" /db_xref="GeneID:881211" /translation="MRMPCRLALALLLCFAGPACLAASGPVRVLSVDGAIGPASADYL VRGIERAAEDGAQLVVLELDTPGGLDASMRRIVKAILASQVPVAGFVAPSGARAASAG TYILYACHIAAMAPGTNLGAATPVRLGTPDKPAEKPPARDADPMARKQVNDAAAYIRG LAQLRGRNAEWAERAVREAVSLAAHEAAAQKVIDLQARDLPDLLRQLDSRSLRVGERA LTLATAGATVERQAPDWRARLLAVLTDPSVALILMMIGIYGLIFELANPGMALPGVLG GICLLLGLYALQMLPVNYAGLALIALGLAFMVGEAFVASFGVLGIGGIVSFVVGALIL IDTEVPGYGIPPGLVVALALLSAALIVGLLGMALRTRRQAVVSGTAGLVGSLATVAAV DSEQPCAGWVLLQGERWRVLAARPLAVGQPVWVLARKGLLLEVALADEGGG" misc_feature 507694..508935 /locus_tag="PA0451" /note="Membrane-bound serine protease NfeD, ClpP class [Posttranslational modification, protein turnover, chaperones]; Region: NfeD; COG1030" /db_xref="CDD:440653" gene 508959..509753 /locus_tag="PA0452" /db_xref="GeneID:881157" CDS 508959..509753 /locus_tag="PA0452" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249143.1" /db_xref="GeneID:881157" /translation="MMGISYGLAMLLVFLALLLFSALRILREYERGVVFQLGRFWKVK GPGLVLVIPAIQQMVRIDLRTIVLDVPPQDVISRDNVSVKVNAVVYFRVLDPQKAIIQ VENYLAATSQLAQTTLRAVLGKHELDEMLAERERLNLDIQQVLDAQTDAWGIKVANVE IKHVDLNESMVRAIARQAEAERERRAKVIHAEGELQASEKLMQAAQMLGRQSGAMQLR YMQTLGAIAGDKSSTIVFPMPIELFGGKYAGAAPRNEKAAGEDEER" misc_feature 509115..509648 /locus_tag="PA0452" /note="Uncharacterized prokaryotic subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; Region: SPFH_eoslipins_u1; cd08826" /db_xref="CDD:259808" misc_feature order(509115..509138,509145..509150,509178..509180, 509202..509210,509247..509252,509256..509264, 509349..509351,509358..509363,509436..509438, 509445..509465,509469..509471,509481..509483, 509493..509495) /locus_tag="PA0452" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:259808" gene 509861..510592 /locus_tag="PA0451a" /db_xref="GeneID:17373341" CDS 509861..510592 /locus_tag="PA0451a" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter substrate-binding protein" /protein_id="YP_008719733.1" /db_xref="GeneID:17373341" /translation="MLRCALLLLTLLLPCALPAANLRLVGDSWPPFVDSRLPGNGLAV ELVTTALKRAGFDSSFQQVPWSRALYGVRSGDYDIALSAWYEPARSLYGQFSRAYLSN RIRLLQRKGRGIEFSRLSDLRPYRIAVVRDYAYAPEFDRDSRLQKVNVTSFANAARML EAGRVDLAVEDELALGVAFKGELADLRDKLEVLPTPLGENGLHLLVSLRNPRHDEIVE GFDLAIRGMRDDGSYQRLLERYGAR" misc_feature 509933..510583 /locus_tag="PA0451a" /note="ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:440596" gene complement(510589..512790) /locus_tag="PA0454" /db_xref="GeneID:881270" CDS complement(510589..512790) /locus_tag="PA0454" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249145.1" /db_xref="GeneID:881270" /translation="MPPSSLTHTLRRLWALDKFAYSLRVFIALAGALLLCWWQDRIEL LIPLFLGIIASALAETDDNWLGRLQALLVTLLCFSVAAFAVELLFPYPWLFVSGMALS AFGMILLGALGERYAAIASATLILSIYTMIGVDQRGGEVADVWHEPLLLVAGAAWYGL LSVLWNALFSNQPVQQSLSRLYFELGEYLRIKSSLFEPLRQLDVEGQRLALARQNGKV VVALNQAKETILNRLGHGRPGPKVSRYLKLYFIAQDVHERASSSHYPYNRLAEAFFHS DVLFRCQRLLNQQGKACQALARAIRLRQPFDYADRELALEDLQASLEHLRQQSNPAWK GLLRSLGALAANLTTLDRKLAGASNPDAIADEQDSALLDRSPRSLKDAFERLRQQLTP TSLLFRHGLRMALALTAGYGVLHWIHPTQGYWILLTTVFVCQPNYGATRLRLVQRILG TVVGLVGGWALIDLFPSPLVQSLFAVAAGVAFFATRSSRYTLATAAITLLVLFCFNQV GDGYGLILPRLFDTLLGSLIAGLAVFLVLPDWQGRRLNRMLANTLACNSRYLRQIMQQ YATGKRDDLDYRTARRNAHNADAALSTTLSNMLLEPGHFRKDAEIGFRFLVLSHTLLS YLSGLGAHRESLPEDASDGLLERAAERLSASLEEIAASLEQKRPVAIYSEEEEALAKE LEQMPEDMDDSHRLVQTQLAHICRQLAPLRTLAAHLLKKELAGAQPLPGQP" misc_feature complement(510637..512757) /locus_tag="PA0454" /note="integral membrane protein, YccS/YhfK family; Region: YCCS_YHJK; TIGR01667" /db_xref="CDD:130728" gene complement(513051..514427) /gene="dbpA" /locus_tag="PA0455" /db_xref="GeneID:881459" CDS complement(513051..514427) /gene="dbpA" /locus_tag="PA0455" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase DbpA" /protein_id="NP_249146.1" /db_xref="GeneID:881459" /translation="MTSTAFSSLPLSADLLANLDSLGYREMTPIQAQSLPLILQGHDL IAQAKTGSGKTAAFGLALLSPLNPRYFGCQALVLCPTRELADQVAKEIRRLARAADNI KVLTLCGGVPYGPQVASLEHGAHVVVGTPGRIQEHLRKGTLVLDGLNTLVLDEADRML DMGFYDSIAEIIGQLPERRQTLLFSATYPDGIEKLAKTFMRDPRQVRVESLHADSQIE QRFFEIDPKQRMDAVVRLLQHFRPQSCVAFCQTRQQCQELADALKAQRISALALHGDL EQRERDQVLTVFANRSCNVLVATDVAARGLDIAALETVINVELARDPEVHIHRIGRSG RAGEKGLALSLVAPAEASRAQAIEDLQKQPLAWYALGQLKASPEPLLPPMSTLCIAGG RKDKVRPGDLLGALTGDAGLPGSAVGKIAIFDFQAFVAIERGLAHQALKRLSEGKIKG RSFKVRLL" misc_feature complement(513054..514427) /gene="dbpA" /locus_tag="PA0455" /note="ATP-dependent RNA helicase DbpA; Provisional; Region: PRK11776" /db_xref="CDD:236977" gene 514775..514984 /locus_tag="PA0456" /db_xref="GeneID:881394" CDS 514775..514984 /locus_tag="PA0456" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cold-shock protein" /protein_id="NP_249147.1" /db_xref="GeneID:881394" /translation="MSRQNGTVKWFNETKGYGFITPESGPDVFVHFRAIEGNGFKTLA EGQKVSFEVVQGQKGMQAERVQVIN" misc_feature 514781..514978 /locus_tag="PA0456" /note="Cold shock protein, CspA family [Transcription]; Region: CspC; COG1278" /db_xref="CDD:440889" gene 515135..515659 /locus_tag="PA0457" /db_xref="GeneID:881578" CDS 515135..515659 /locus_tag="PA0457" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249148.1" /db_xref="GeneID:881578" /translation="MKPVQSRRLAFAALLSLSFSSASCHAATEHWGWIEQSWLMPERM QAKAKLDTGALTSSLDARNIHRYKKDGERWVRFDVVLPTADSKAPVSVTFERKVLRLI KVRGAGGSDSRPVVAMDICLGAKLLREQFSLRDRGNMNYPVLLGRRTLEHLGAVDVSR TFTRKPTCSALAAQ" misc_feature 515222..515635 /locus_tag="PA0457" /note="Putative ATP-dependant zinc protease; Region: Zn_protease; pfam05618" /db_xref="CDD:283308" gene complement(515653..516027) /locus_tag="PA0457.1" /db_xref="GeneID:6965626" CDS complement(515653..516027) /locus_tag="PA0457.1" /note="'Product name confidence: class 4:Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences.'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003933608.1" /db_xref="GeneID:6965626" /translation="MAWIATLKRWARELKTEVIALWLCSRHPHMPWLARLVALLVVAY ALSPIDLIPDFIPLLGYLDDLLLVPLGIWLAIRLTPPTLLAECRARAREVETHPRNLW MAALIVLFWVALGAGLLRWFFY" misc_feature complement(515743..516021) /locus_tag="PA0457.1" /note="Uncharacterized membrane protein YkvA, DUF1232 family [Function unknown]; Region: YkvA; COG3339" /db_xref="CDD:442568" gene complement(516029..517462) /locus_tag="PA0458" /db_xref="GeneID:881500" CDS complement(516029..517462) /locus_tag="PA0458" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_249149.1" /db_xref="GeneID:881500" /translation="MSEPFQLTPRIARQLPWLVAVAFFMQALDGTILNTALPSMASSL NENPLRMQAVVIAYLLTVALLIPASGWIADRFGTRRVFLGAVLLFSLGSLLCALSPSL ELLVGARIVQGVGGALMMPVGRLVILRVYPRQDLVRVLSFVTIPGLLGPLAGPTLGGW LVEYASWHWIFLINLPVGLLGCLVAMKLMPDLRSPVPSRFDSIGFLLFGGSMVLISIA LEGLGELHLSHLRVVLLLIGGLVLLTAYWLRALRIDKPLFPPSLFKARTFAVGILGNL FARLGSGALPFLTPLLLQVGLGYPPSTAGMTMIPLALFAMVAKPMAKPLLDFFGYRKL LVGNTLILGCLIAGFGLVDQDTPYVWLLLHLSLLGAVNSLQFTAMNTLTLIDLQDSNA SSGNSLMSVVVQLSISLGVACAAALLGGFQTDLDTGQDTVLGAFHATYVSVGLMSMLA AAIFFQLGSEDGRTSPRRVDPEKDPDL" misc_feature complement(516101..517414) /locus_tag="PA0458" /note="putative transporter; Provisional; Region: PRK10504" /db_xref="CDD:182502" gene 518083..520635 /locus_tag="PA0459" /db_xref="GeneID:881659" CDS 518083..520635 /locus_tag="PA0459" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chaperone protein ClpB" /protein_id="NP_249150.1" /db_xref="GeneID:881659" /translation="MDIAEYFSKQTTEYLQRAAQVAAEFGKREVDTEHLLYALADADV VQAVLKQFGLSPADLKQYIEANAVRGASKGEASEDMTISPRVKSALQHAFALSRELGH SYVGPEHLLLGLAAVPDSFAGTLLKKYGLTEQALRQKAVKVVGKGAEDGRVDGPSNTP QLDKFSRDLTRLAREGKLDPVIGRSKEVETTIEVLARRKKNNPVLIGEPGVGKTAIVE GLAQRMVQGEVPEVLRDKRLVELNINAMVAGAKYRGEFEERLKQVMDELQAAQSEIIL FIDEVHTIVGAGQGGGEGGLDVANVLKPAMARGEMNLIGATTLNEYQKYIEKDAALER RFQPVFVPEPTVEQTISILRGLRDKLEGHHKVTIRDEAFVAAAELSDRYIGNRFLPDK AIDLIDQAAARVRIASTSRPAEIQELEAELAQLKREQDYAASRKWYDEAKVFEKRIQE RKEHLEQITERWQQTQGSKTEEVRVEDIAEIISKLTGIPVTELTAEEREKLLQMEERL HQRVIGQQEAITAVSDAVRLARAGLRQGSRPIATFLFLGPTGVGKTELAKALAEVVFG DEDAMIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKA HADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQAGEFAQPPEK LKRELMTTLRGHFRPEFLNRLDEVIVFESLSKAQIEDIVRLQLERVKRAAHAQDIYLH IDDSLVGHLAEEAYQPEFGARELKRQIRQQLETRLATAMLKGEVKEGETVTFFYDAKD GVGYRKGAAPNPAARKKSGAGETPRGRATAARKPAAKKGAAAKGKADKPKAK" misc_feature 518083..520632 /locus_tag="PA0459" /note="AAA family protein disaggregase ClpG; Region: disagg_AAA_ClpG; NF033607" /db_xref="CDD:411229" gene 520737..521315 /locus_tag="PA0460" /db_xref="GeneID:881603" CDS 520737..521315 /locus_tag="PA0460" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249151.1" /db_xref="GeneID:881603" /translation="MRVTTHATLAAALLLSAASAFAFNLGDAAKAVAGASQGDSAQVA TTPQTSGLLGALTGQLGVSQEQAVGGTGALLGLAKNQLAGNDYSQLVKTIPGLDKLAG NNALAGLGGLGNVLGKSGGDSKGLGSLLGNADSMGDVNKAFGTLGMDSGMTEKFAQVL VDYFGKQGANSELLGSLSNLWGVSKAGGSSLL" misc_feature 520821..521270 /locus_tag="PA0460" /note="Protein of unknown function VcgC/VcgE (DUF2780); Region: DUF2780; pfam11075" /db_xref="CDD:431642" gene complement(521630..522517) /locus_tag="PA0461" /db_xref="GeneID:881755" CDS complement(521630..522517) /locus_tag="PA0461" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="acyltransferase" /protein_id="NP_249152.1" /db_xref="GeneID:881755" /translation="MRELLTGLTSSLLLLLNTLILIGPMMLIALLKLVLPGQRLKDLC SRGVMWIAETWAEIDKWIFATCTPTVWDVRGASDLRQDTSYLVVSNHQSWVDIPALIQ VFNRRTPYFKFFLKKELIWVPFLGLAWWALEYPFMKRYSKAFLEKHPELKGKDLEITK AACEKFKRIPVTVVNYLEGTRFSEQKKARQQSPYRHLLKPKAGGVAFVLAALGEQLDA LLDVTVVYPSDKVPGFWDLLCGRVPKVIVDIQTRPIDPALWQGDYENDPVFRQYVQEW VSRMWEEKDERIARLRQLR" misc_feature complement(521639..522448) /locus_tag="PA0461" /note="putative acyltransferase; Provisional; Region: PRK14014" /db_xref="CDD:237584" gene 522660..523169 /locus_tag="PA0462" /db_xref="GeneID:881706" CDS 522660..523169 /locus_tag="PA0462" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249153.2" /db_xref="GeneID:881706" /translation="MKRALALLSLFALPVLAAEPNLYGRYEWVSLPELDRTLQAKMDT GAYTSSLSAKDIELFQRDGEEWVRFRLATKEADGSVFEHKLARIGKIKNRADNRSGED EDEDRLSERPVIDLQVCLGGAMKTIEVNLTDRSAFNYPFLMGTKGLRKFHVAVDPSER FVADKPTCK" misc_feature 522723..523157 /locus_tag="PA0462" /note="Putative ATP-dependant zinc protease; Region: Zn_protease; pfam05618" /db_xref="CDD:283308" gene 523254..523943 /gene="creB" /locus_tag="PA0463" /db_xref="GeneID:881852" CDS 523254..523943 /gene="creB" /locus_tag="PA0463" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator CreB" /protein_id="NP_249154.1" /db_xref="GeneID:881852" /translation="MPHILIVEDEAAIADTLLYALQAEGFATTWVTLAGEALALQERQ PADLLILDVGLPDISGFEACKRLRRFSEVPVIFLTARDAEIDRVVGLEIGADDYVVKP FSPREVAARVKAILKRMAPRPAALEEAAPSGPFQVDEERVRIHYRDTPLNLTRHEFRL LQTLLGQPERVFSREQLLDALGVASEAGYERNIDSHIKSLRAKLRQVNERGEAIQTHR GLGYSYSPDHA" misc_feature 523254..523931 /gene="creB" /locus_tag="PA0463" /note="DNA-binding response regulator CreB; Provisional; Region: PRK11083" /db_xref="CDD:236838" gene 523943..525367 /gene="creC" /locus_tag="PA0464" /db_xref="GeneID:881807" CDS 523943..525367 /gene="creC" /locus_tag="PA0464" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="sensory histidine kinase CreC" /protein_id="NP_249155.1" /db_xref="GeneID:881807" /translation="MPLGVRIFLVYFLFVGLTGYFVLSTVMDEVRPGVRQSTEETLVD TANLLAEILRQDVKNGTLAQSDLPEMLEDYGKRVPQADIWGLRKEAVNHRIYVTDASG KVLLDSAGVAVGQDYSRWNDVYLTLRGQYGARSSREDPDDPDSSVMYVAAPIKDGGKI IGVVSVAKPNSSLQPYIDRSQRRLAWLGAGLIALGLLVGGLLSWWLSGALRRLTQYAQ AVSEGRRAELPRYRGGEMAQLADAVERMRTQLEGKDYVERYVHTLTHELKSPLAAIRG AAELLDGEMPAEQRARFVGNIAGESERLQQLIERLLSLAQVEQRQGLEEVGKVDLREI AASLLEGQAARIQRQRLRVENRLEGPCEVRGEQFLLRQALANLLDNALDFTPPGGILR LLAEADGEGIALRLFNQGPAIPDYALARLTERFYSLPRPASGRKSTGLGLNFVAEVAQ LHGGRLQVGNRDDGVEALLWLPRG" misc_feature 523943..525364 /gene="creC" /locus_tag="PA0464" /note="sensory histidine kinase CreC; Provisional; Region: PRK11100" /db_xref="CDD:236846" gene 525469..526827 /gene="creD" /locus_tag="PA0465" /db_xref="GeneID:881586" CDS 525469..526827 /gene="creD" /locus_tag="PA0465" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249156.1" /db_xref="GeneID:881586" /translation="MNRTLAYKLGAIALLILLLLIPLLMIDGLIRDRQEVRDGVLQDI ARSSSYSQRLTGPLLVVPYRRTVREWVTEEKTEKRVLQEREQRGELYFLPDRFALDGQ MRTELRYRGIYQARLYHVDNKVAGYFQVPAHYGIEEDLEDYQFETPFLAMGISDIRGI ENALRLSLNGASVDFEPGSRVGLLGSGVHAPLQGVDGRQAQRLEYAFDLSLLGSERLD IVPVGRDSQVILKADWPHPSFGGEFLPSEREITAQGFTARWQTSFFATNMEEALRSCV EEQRCDGFQARAFGVGLVDPVDQYLKADRAIKYALLFITLTFAGFFLFEVLKRLAVHP VQYALVGLALAFFYLLLLSLAEHVGFELAYLVSAGACVGLIGFYLCFVLRSVARGLGF SVGLAGLYGLLYGLLSAEDYALLMGSLLLFAVLAAVMVLTRRLDWYGVGRKDFPAVPA RA" misc_feature 525550..526785 /gene="creD" /locus_tag="PA0465" /note="cell envelope integrity protein CreD; Region: PRK11715" /db_xref="CDD:236960" gene 526877..527179 /locus_tag="PA0466" /db_xref="GeneID:881868" CDS 526877..527179 /locus_tag="PA0466" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249157.1" /db_xref="GeneID:881868" /translation="MRLFFEFTLCAALGLLVSGVILIFLLFFGKFGLIEYWIASGKPL AHAMLVLMPDGFWEGLSGIEGAAGNPHVRSFLELCMGLGQSALLLGLLLFRLVCWK" gene complement(527324..527944) /locus_tag="PA0467" /db_xref="GeneID:880576" CDS complement(527324..527944) /locus_tag="PA0467" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249158.1" /db_xref="GeneID:880576" /translation="MSATHTLFYAAASPFVRKVLVLLHETGQRERVALEEVTPTPVAP IRQLNASNPAGKIPALRLPDGQVLHDSRVICDYFDQQHVGEPLIPREGSARWRRLTIA SLADAVLDAAVLSRYETFVRPEEKRWDTWLEAQREKIGRSLAWLEGDCIAELQARFDI AAIGVACALGYLDLRQPEWDWRGRYPRLAAWFAEVSQRPSMQATRA" misc_feature complement(527708..527926) /locus_tag="PA0467" /note="GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of...; Region: GST_N_3; cd03049" /db_xref="CDD:239347" misc_feature complement(order(527717..527722,527729..527731, 527870..527875,527882..527887,527891..527896, 527900..527902)) /locus_tag="PA0467" /note="putative C-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:239347" misc_feature complement(order(527732..527737,527771..527779, 527900..527902)) /locus_tag="PA0467" /note="putative GSH binding site (G-site) [chemical binding]; other site" /db_xref="CDD:239347" misc_feature complement(order(527717..527719,527726..527731, 527735..527740,527777..527779)) /locus_tag="PA0467" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:239347" misc_feature complement(527327..527650) /locus_tag="PA0467" /note="C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases; Region: GST_C_6; cd03205" /db_xref="CDD:198314" misc_feature complement(order(527510..527512,527519..527524, 527531..527533,527543..527545,527552..527554, 527561..527572,527576..527578,527591..527596, 527615..527617,527624..527629,527633..527641, 527645..527650)) /locus_tag="PA0467" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:198314" misc_feature complement(order(527327..527338,527342..527347, 527357..527359,527432..527434,527444..527446, 527453..527458,527465..527467,527594..527596, 527615..527620,527627..527629,527639..527641)) /locus_tag="PA0467" /note="N-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:198314" misc_feature complement(order(527432..527434,527441..527443, 527600..527605,527612..527617,527627..527629)) /locus_tag="PA0467" /note="putative substrate binding pocket (H-site) [chemical binding]; other site" /db_xref="CDD:198314" gene complement(527963..528913) /locus_tag="PA0468" /db_xref="GeneID:881592" CDS complement(527963..528913) /locus_tag="PA0468" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249159.1" /db_xref="GeneID:881592" /translation="MRHLPYPLLGLFLALSSTGAALAGEQYYPLDKGSAPYAVAPSAQ GAVWYGADGGHSLGRLDPTSGESVQVPLGEGARPRAIVSDESGNAWVLDSGLNAILRI GGERLGSERFPLPAKAAPAGLESAVFDDDGRLWFTGSRGFHGRLDPARRLVEVWPSPQ GKAANGICVTPDGEVWYAQDDALVHVDPLDGSAERLPAPEGTKALRGIGADSIGRLWA SDSGGARLYRYDPSDASWQSWPLPDSQARPDSLRVDAMDRVWLHDAASGALLRFDSEQ ATFRVLPSDRPAPGNALLGGRPGETWSAEPAADRLRVVRD" misc_feature complement(528062..528838) /locus_tag="PA0468" /note="Streptogramin lyase [Defense mechanisms]; Region: Vgb; COG4257" /db_xref="CDD:443399" gene 528999..529856 /locus_tag="PA0469" /db_xref="GeneID:878616" CDS 528999..529856 /locus_tag="PA0469" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249160.1" /db_xref="GeneID:878616" /translation="MATVEILGAECRAGGAVNDDALGCTAQAAWVIDGATSIGRSVLG VESDARWLAQAVDRHLRLLLEVEPEQSSETLLRRLLNDIQGDFRAQSGRDWHDLEDMP AACLSLLRIRGGEIELLNIGDSRILVEGADGQVRSFGDSALHELDRQSLAHFCRMREE HPQWDHAELFKASRPRVRQNRLLMNKPEGYWALDISDRWLGQVQRETLPLAALRSFVL MTDGFDRLVEPFRRYTDEQLLRRLEDVGVSAMLDELREIEQGDDQALAFPRFKIHDDA SALWGRIAG" misc_feature 529020..529760 /locus_tag="PA0469" /note="Protein phosphatase 2C; Region: PP2C_2; pfam13672" /db_xref="CDD:404547" gene complement(530029..532437) /gene="fiuA" /locus_tag="PA0470" /db_xref="GeneID:880545" CDS complement(530029..532437) /gene="fiuA" /locus_tag="PA0470" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="ferrichrome receptor FiuA" /protein_id="NP_249161.1" /db_xref="GeneID:880545" /translation="MPRPTFRPGLLALAIALAVPAPFLHAAPAEQASVRDYRIAAGPL AGTLNRIAAQAGLVLTLDPALAEGRSAHAVQGRFDAPGALREALKGSGLELVENAGGT YSLRKVPEDTLSLQAMTVSGAEEDPLGPTSGYVAKRSMTGTKTDTPILETPRSISVAT RQQMTDRAVHNLDDAVRYMPGVVASSFGSDSRSDWLKVRGFKPTQFLDGLPMAVGVYN NPKLETWNLERVALLRGPASSVYGQTPPGGMLDMVSLRPQNVASHEVKAEVGNYNHKQ VSFDSTGPLDDEGRFLYRVSGVVRDSNTQVDHIDDKRYNIAPSLTWNIDDDTRLTFLG QFNRDDTGITSQFLPLRGTKYDAPFGKVSHHKNLGDPDWEYYDRTYYWLGYAFERRIN DVWQFRQNLRYLRNDLSFQALTPASYYAAASDDGTLQRTSTSVDEDVSQFVVDNNFQA DFDTGALRHTLLLGLDHNRTTNEYTSIFGFNVPPTNINNPIYGQPIPKPPRSDAYYDY KQKTYQTGLYVQDQIALDNWRLTLGGREDWVHTGATFYNKGDATNTSRDKKFSGNAAL SYIFDNGVAPYISYAESFQPTTGADMNSTSSLKPTEGKQWEIGVKYQPVGSDSLFTAA VYDLRQENVSVSQNIGGTPVTSQTGEVKVSGIELEATSNVTDNLKMIGAYSYADTEVK KGQYAGNRLQQAPRNQASLWADYTWHEGTLNGFSVGAGARYVGSTYGDQANTYDGYAG SYTLYDAAVRYDLGQLNGSLKGVSVAVNANNLFNKDYLASCDGYYCYYGDQRSVVGSV SYKW" misc_feature complement(532117..532254) /gene="fiuA" /locus_tag="PA0470" /note="Secretin and TonB N terminus short domain; Region: STN; smart00965" /db_xref="CDD:198033" misc_feature complement(530032..532176) /gene="fiuA" /locus_tag="PA0470" /note="Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]; Region: FhuE; COG4773" /db_xref="CDD:443805" gene complement(532541..533512) /locus_tag="PA0471" /db_xref="GeneID:879576" CDS complement(532541..533512) /locus_tag="PA0471" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transmembrane sensor" /protein_id="NP_249162.1" /db_xref="GeneID:879576" /translation="MSADDRHSPVRARVLDEAIAWQLLLDSGEAHPDDHRAFHRWYAA HPEHERAWEQLGGLDRHLARAANGPARNALLSGNARFKRRLRRLGGSALGLVLALGVG LGVANRYVPVRYLLADAYSATGEQRELTLPDATHVRLNSRSAIDVRFDGERRQVVLLA GEILVETAHGDPRPFVVSSADGDMRALGTRFLVRREEPGTRLTVLQSAVAARAETLSE ERVIKEGQQVLILPQGLQASEAAPALAGAWAQGMLVVENARLADLVAELGRYSPALLQ VDPSIADLRVTGSFPLKDTRLALQALEPSLPVRSVRHNAWWFEVVPR" misc_feature complement(532547..533491) /locus_tag="PA0471" /note="fec operon regulator FecR; Reviewed; Region: PRK09774" /db_xref="CDD:236622" gene complement(533509..534027) /locus_tag="PA0472" /db_xref="GeneID:880895" CDS complement(533509..534027) /locus_tag="PA0472" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /protein_id="NP_249163.1" /db_xref="GeneID:880895" /translation="MSAGDVSNSEFVGSLYRDHRGWLLAWLNRNLGCRQRAEDLSQDT FVRLLGRPELPGLREPRAFLAKVARGLMIDHFRRAALEQAYLAELALVPEAEQPSAEE QYLILEDLREIDRLLGTLSLKARSAFLYSRLDGMPHAEIAERLGVSVPRVRQYLAQGL RQCYIALYGEPR" misc_feature complement(533512..534027) /locus_tag="PA0472" /note="RNA polymerase sigma factor; Reviewed; Region: PRK12523" /db_xref="CDD:183572" protein_bind 534061..534079 /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452." /bound_moiety="Fur" gene 534196..534945 /locus_tag="PA0473" /db_xref="GeneID:878426" CDS 534196..534945 /locus_tag="PA0473" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutathione S-transferase" /protein_id="NP_249164.1" /db_xref="GeneID:878426" /translation="MAEPLLIIGSYLSPYVRKVLVLLELKGIAYRIDPIVPFFGDEAF ERLSPLRQIPVLVDGDFVLNDSSVICQYLEERYPQPSLYPVDIGQRAQARWLEEYADS RLGQVIIWQLFHQLVINRGIWQREPDQAILQRTYDEDLPSICNYLEGRIPPSGWLCGE LSIADVAVACLFRNAQLARYQVDGERWPRLARLLADAFALPAFQHLARFEKATAQTPV AEQRQALREAGAPLSATSHARERPVRGPMSR" misc_feature 534214..534807 /locus_tag="PA0473" /note="Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]; Region: GstA; COG0625" /db_xref="CDD:440390" gene 535085..535489 /locus_tag="PA0474" /db_xref="GeneID:877866" CDS 535085..535489 /locus_tag="PA0474" /codon_start=1 /transl_table=11 /product="esterase" /protein_id="NP_249165.1" /db_xref="GeneID:877866" /translation="MMNVPEGFQPLFRSSPLLDLLGPFFCRQDAQRQLVVALRIDEKH CNHGGTAHGGLLSTLADVGLGYAMAFSREPPQPMVTVGLRLDFCGVARVGDWLEVHTR VDKLGQRMAFASARLHSGERLVASASGVFHLP" misc_feature 535085..535486 /locus_tag="PA0474" /note="Acyl-CoA thioesterase PaaI, contains HGG motif [Secondary metabolites biosynthesis, transport and catabolism]; Region: PaaI; COG2050" /db_xref="CDD:441653" gene 535539..536108 /locus_tag="PA0475" /db_xref="GeneID:879516" CDS 535539..536108 /locus_tag="PA0475" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249166.1" /db_xref="GeneID:879516" /translation="MPKKSNAAERIVHATASLLASRGYFGTGLSDIIARAEAPKGSLY HYFPEGKPQIASAAIGFVADEVASFLDRAGTQAPHARNVLRQFTATLRGWLEHSRFEE ACPVLSTSLSIDAELAPVHAECRRALRAWHASIERALRADGLAEKLAASRAWLILAAL EGAVAVARVERSFQALDAIEEELQALLPA" misc_feature 535539..536018 /locus_tag="PA0475" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene complement(536142..537869) /locus_tag="PA0476" /db_xref="GeneID:877689" CDS complement(536142..537869) /locus_tag="PA0476" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="permease" /protein_id="NP_249167.1" /db_xref="GeneID:877689" /translation="MSSTPKPPASPREFSPSLLDLGTLESLDSLPRAGQRSAEFSASL LDLGTPASLDCLPRAGLRAAEFSAARLDLGTPASLDCLPRASHHAGPELPPLSPRLYS ADLAPTKAEGRRWGRYSLFALWTNDVHNIANYSFAIGLFALGMSGAQILAALALGALM VYGLMNLSGYMGQKTGLPYPVMCRIAFGIHGAQLPALIRAVIAIAWFGIQTYLASIVL RVLLTAIWPGLAAYDQDAILGLSSLGWATFVAIWCVQLLIFAYGMEMVRRYESFAGPV ILLTVAALAAWMYLRAGASIAWSSGEPMSGSQMWLKIFGGAAFWVTLYGTMILNFCDF ARGCPDRRTISVGNFWGLPVNILLFGLFAVVLAGAQFRIDGQLIQSPTDIVAAIPDTL FLVLASLALLIVTVAVNIMANFVAPAYVLTNLAPNLLNFRRAGLISATIAVLILPWHL YNSPGVILYFLGGLGALLGPLYGIIMVDYYLVRKGRVNLPELYTESRAGAYHYARGVN PRAIAAFVPAAIISTLLALLPAFAELSPFSWFFGAGLAGLIHYALAKRRTAYREVSGE AIAVDSVQH" misc_feature complement(536202..537581) /locus_tag="PA0476" /note="uncharacterized nucleobase-cation-symport-1 (NCS1) transporter subfamily; solute-binding domain; Region: SLC-NCS1sbd_u1; cd11555" /db_xref="CDD:271404" misc_feature complement(order(536646..536651,536658..536660, 537483..537485,537492..537494)) /locus_tag="PA0476" /note="Na binding site [ion binding]; other site" /db_xref="CDD:271404" misc_feature complement(order(536631..536633,536643..536645, 536892..536894,536898..536903,537240..537242, 537252..537254,537480..537482)) /locus_tag="PA0476" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:271404" gene complement(538217..539143) /locus_tag="PA0477" /db_xref="GeneID:878447" CDS complement(538217..539143) /locus_tag="PA0477" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249168.1" /db_xref="GeneID:878447" /translation="MHPLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALG RLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLEEWRPFVPGQSQRTFV FAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAERKLSVEALASGRIDFALGYDEEHE RLPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLL ARSGLRREVAVQLPTVLAALFLAGSTDFLLTAPRHAARALAEAAGLALYPAPFDIPPY VLRLYSHVQHVGRDAHAWMIGQLKGLDISRTG" misc_feature complement(538949..539101) /locus_tag="PA0477" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(538238..538846) /locus_tag="PA0477" /note="The C-terminal substrate biniding domain of an uncharacterized LysR-like transcriptional regulator Pa0477 related to DntR, contains the type 2 periplasmic binding fold; Region: PBP2_Pa0477; cd08468" /db_xref="CDD:176157" misc_feature complement(order(538310..538312,538511..538513, 538622..538624,538805..538807,538817..538822, 538826..538828)) /locus_tag="PA0477" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176157" misc_feature complement(order(538373..538375,538415..538417, 538424..538429,538436..538441,538448..538462, 538544..538546,538742..538744,538748..538762, 538766..538771,538778..538783,538787..538792, 538799..538804,538811..538816,538823..538825)) /locus_tag="PA0477" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176157" gene 539231..539707 /locus_tag="PA0478" /db_xref="GeneID:878613" CDS 539231..539707 /locus_tag="PA0478" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="N-acetyltransferase" /protein_id="NP_249169.1" /db_xref="GeneID:878613" /translation="MTLEIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSL FAEGSPTRALMCLSEGRPIGYAVYFYSYSTWLGRNGIYLEDLYVTPEYRGVGAGRRLL RELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGALPQDEWVRYRLDGEALRKMAE" misc_feature 539234..539689 /locus_tag="PA0478" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" gene complement(539785..540735) /locus_tag="PA0479" /db_xref="GeneID:878427" CDS complement(539785..540735) /locus_tag="PA0479" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249170.1" /db_xref="GeneID:878427" /translation="MHDFTLHDLQCFDAVVDAGGFQAAAQRLHRSHPAVFAAVARLER QLGLALLERGGYRVGLTAAGRSFHQRAQALLYELEGLRGHAAHLAQGEESELRVVLGD LCPPRPALALLAGFFGSQPQTRLQLLFETVSGPLERLLDGEADLILHRVDKSDPRLEW LDLCRVGLVPVIAPGLLGDPPPRPVRPEQLRPFAQCVMRDSARHSPPTDYFMLAGARQ CSVPDQRTKKEVILQGLGWGHLPDFLIDEELADGRLLALAGPHLPGRSEEVVAARRRD RAQGPVAERLWAFLRDNATALRESGMDTGGDDSAGARRPR" misc_feature complement(539848..540726) /locus_tag="PA0479" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 540839..541636 /locus_tag="PA0480" /db_xref="GeneID:879639" CDS 540839..541636 /locus_tag="PA0480" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="3-oxoadipate enol-lactonase" /protein_id="NP_249171.1" /db_xref="GeneID:879639" /translation="MGNLSFLATSDGASLAYRLDGAAEKPLLALSNSIGTTLHMWDAQ LPALTRHFRVLRYDARGHGASSVPPGPYTLARLGEDVLELLDALEVRRAHFLGLSLGG IVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMSETAAGFLGNWFP PALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDT VTAASHGELIAASIAGARLVTLPAVHLSNVEFPQAFEGAVLSFLGAA" misc_feature 540881..541624 /locus_tag="PA0480" /note="3-oxoadipate enol-lactonase; Region: protocat_pcaD; TIGR02427" /db_xref="CDD:131480" gene 541679..542122 /locus_tag="PA0481" /db_xref="GeneID:879761" CDS 541679..542122 /locus_tag="PA0481" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249172.1" /db_xref="GeneID:879761" /translation="MNEPGSFIWTWYGQDEHRWVLLSAEAFLALDFLALDGAMQRETI GSCPGCSTWSEKVVPLHEWLEGCPGHQAGSFRDALRRVWALCNELPEEALGCFDFDIY AHPGWQAVRREAREALRQNGWDSIRSHAEELRDDCWERVHGYPKK" gene complement(542170..544347) /gene="glcB" /locus_tag="PA0482" /db_xref="GeneID:879477" CDS complement(542170..544347) /gene="glcB" /locus_tag="PA0482" /EC_number="2.3.3.9" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="malate synthase G" /protein_id="NP_249173.1" /db_xref="GeneID:879477" /translation="MTERVQVGGLQVAKVLFDFVNNEAIPGTGVSADTFWTGAEAVIN DLAPKNKALLAKRDELQAKIDGWHQARAGQAHDAVAYKAFLEEIGYLLPEAEDFQAGT QNVDDEIARMAGPQLVVPVMNARFALNASNARWGSLYDALYGTDVISEEGGAEKGKGY NKVRGDKVIAFARAFLDEAAPLESGSHVDATSYSVKNGALVVALKNGSETGLKNAGQF LAFQGDAAKPQAVLLKHNGLHFEIQIDPSSPVGQTDAAGVKDVLMEAALTTIMDCEDS VAAVDADDKVVIYRNWLGLMKGDLAEEVSKGGSTFTRTMNPDRVYTRADGSELTLHGR SLLFVRNVGHLMTNDAILDKDGNEVPEGIQDGLFTSLIAIHDLNGNTSRKNSRTGSVY IVKPKMHGPEEAAFTNELFGRVEDVLGLPRNTLKVGIMDEERRTTVNLKACIKAAKDR VVFINTGFLDRTGDEIHTSMEAGAVVRKGAMKSEKWIGAYENNNVDVGLATGLQGKAQ IGKGMWAMPDLMAAMLEQKIGHPLAGANTAWVPSPTAATLHALHYHKVDVFARQAELA KRTPASVDDILTIPLAPNTNWTAEEIKNEVDNNAQGILGYVVRWIDQGVGCSKVPDIN DVGLMEDRATLRISSQLLANWLRHGVISQEQVVESLKRMAVVVDRQNASDPSYRPMAP NFDDNVAFQAALELVVEGTRQPNGYTEPVLHRRRREFKAKNGL" misc_feature complement(542176..544347) /gene="glcB" /locus_tag="PA0482" /note="malate synthase G; Provisional; Region: PRK02999" /db_xref="CDD:235097" misc_feature complement(order(542455..542457,542968..542970, 542974..542976,543052..543054,543328..543330)) /gene="glcB" /locus_tag="PA0482" /note="active site" /db_xref="CDD:238370" protein_bind 542414..542426 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 544654..545097 /locus_tag="PA0483" /db_xref="GeneID:879556" CDS 544654..545097 /locus_tag="PA0483" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_249174.1" /db_xref="GeneID:879556" /translation="MPVHAASLADLADLVPLFSAYLDFYEVPAPEEQVRAFLAERLRQ GDSTLFLARDAEARALGFVQLYPLFASLALRPSWLLSDLYVRPEARRRGVGEALMNQA RGFAESMGACGLQLETAKTNHAGQSLYERLGYVRDEQFYTYWLQL" misc_feature 544654..545073 /locus_tag="PA0483" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" gene 545129..545644 /locus_tag="PA0484" /db_xref="GeneID:877920" CDS 545129..545644 /locus_tag="PA0484" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249175.1" /db_xref="GeneID:877920" /translation="MDHLVLTVIATDHPGLVERIAQCIASHGGNWLESRMSRMAGQFA GILRVAVPAEGYDELVEGLQGLSSHGIRVLLAESGIEPVCNWKPIHLDLVGNDRPGIV RDITRLLAEHGVNLESLSTEVRPAPMSSEPLFHADALLAVPLTLSLDTLRERLEDLAD DLMVELVLDAS" misc_feature 545129..545638 /locus_tag="PA0484" /note="Glycine cleavage system regulator GcvR [Amino acid transport and metabolism]; Region: GcvR; COG2716" /db_xref="CDD:442029" gene complement(546334..547230) /locus_tag="PA0485" /db_xref="GeneID:878192" CDS complement(546334..547230) /locus_tag="PA0485" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249176.1" /db_xref="GeneID:878192" /translation="MATANLRRGYVLGLTAYVIWGLFPLYFKLLERIPAVEIIVQRAV WSALFGAVLLLFWKHPGWWRELRQNPQRFVVLAASGLLIASNWMTYVWAVNNGHMLEA SLGYYINPLINVMLGMLLLKERLRPLQWLAVALASLGVAQQVWQLGSLPWVSLVLALT FGFYGLIRKKAPVAALPGLVVETWLLLPLALVWLLFFADGPTSETAFWSTPEALWVVA AGPVTLVPLVCFNAAARHLPYATLGFLQYLAPTLVLLQAILLFGEHLDSSRLTAFAFI WLALAVYSFDAWRSLRRLPQPG" misc_feature complement(546340..547224) /locus_tag="PA0485" /note="Membrane protein RarD, contains two EamA domains, drug/metabolite transporter family [General function prediction only]; Region: RarD; COG2962" /db_xref="CDD:442202" gene complement(547432..548406) /locus_tag="PA0486" /db_xref="GeneID:881857" CDS complement(547432..548406) /locus_tag="PA0486" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="serine/threonine protein kinase" /protein_id="NP_249177.1" /db_xref="GeneID:881857" /translation="MSHPFDQLTPDLVLDAVESLGYLSDARVLALNSYENRVYQVGIE DGEPLIAKFYRPDRWSDAAIREEHAFSAELAECEVPVVAPLSRDGESLFAFSGFRFAL FPRRGGRAPEPGNLDQLYRLGQLLGRLHAVGATRPFEHREALAVDNFGHASLATLLEG NFIPRSLLPAYESVARDLLKRLDALFAEVPYQPIRLHGDCHPGNLLCRDDVYHMVDLD DCRMGPALQDLWMMLAGERHERLAQIAELVDGYNEFHDFDPRQLPLLEGLRSLRLMHY SAWLARRWDDPAFPPSFPWFGSERYWGEQVLVLREQLAALDEEPLRLF" misc_feature complement(547438..548406) /locus_tag="PA0486" /note="serine/threonine protein kinase; Region: PRK11768" /db_xref="CDD:236974" gene complement(548468..549226) /locus_tag="PA0487" /db_xref="GeneID:878638" CDS complement(548468..549226) /locus_tag="PA0487" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="molybdenum transport regulator" /protein_id="NP_249178.1" /db_xref="GeneID:878638" /translation="MSALSTLAQHVTRRPQRIALLAQIAELGSITRAAKAVGISYKGA WDAIDELNNLAERPLVERSVGGKGGGGARLTAEGERLLALYRRLEALQAQVLQAAEDA EDLNLIGRLMLRTSARNQLHGRVLSIHGEGFHDRIAIELPGQQRIEALITRASTEQLE LGRGRPVLALIKAGWLDVGLEPREDQPNQLHGTLEEILAAKAGPSEVRIALGSGLTLC ALLSGERLASLGLKKGQKVIASFDPAQVLLGTPL" misc_feature complement(548477..549184) /locus_tag="PA0487" /note="DNA-binding transcriptional regulator ModE; Provisional; Region: PRK10676" /db_xref="CDD:182640" gene complement(549294..549614) /locus_tag="PA0488" /db_xref="GeneID:880360" CDS complement(549294..549614) /locus_tag="PA0488" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249179.1" /db_xref="GeneID:880360" /translation="MRALLVAACLLLGGCSHFAEDDWLGEDKALHFASSAALAAAGMQ MAHDRGLRGARQARFGLSFSLAFGVGKEFYDSRSAGSGWSWKDLAWDLAGAAAGYGLY QAAE" misc_feature complement(549297..549578) /locus_tag="PA0488" /note="YfiM family lipoprotein; Region: PRK10759" /db_xref="CDD:182705" gene complement(549656..550381) /locus_tag="PA0489" /db_xref="GeneID:881420" CDS complement(549656..550381) /locus_tag="PA0489" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phosphoribosyl transferase" /protein_id="NP_249180.1" /db_xref="GeneID:881420" /translation="MSFPLRPLTRWLLPPPACLLCAARSDQPPRPLCRACAADLPWSR QQCRRCALPLPLDGQVCGECLRRPPAYEQAIAPWRYAFPLDSLINRFKHQAAWPLGRL LGELLAEHLRQRYAEGLPRPARLLPVPLAPRRERRRGFNQAQQLAERLAGELDLRCDP HSLRRVLDTPAQQGLDATVRRRNLRHAFALAPASDVRGLHLALVDDVLTTGATAERLS RLLRRAGAARVDVYCLARTPKPG" misc_feature complement(549665..550381) /locus_tag="PA0489" /note="DNA utilization protein ComFC/GntX, contains phosphoribosyltransferase domain [General function prediction only]; Region: ComFC; COG1040" /db_xref="CDD:440662" gene complement(550520..550813) /locus_tag="PA0490" /db_xref="GeneID:879667" CDS complement(550520..550813) /locus_tag="PA0490" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249181.1" /db_xref="GeneID:879667" /translation="MGTEGFFDGLGEMLGRAIRFVVDLLSGLLGGIWDAMDDFLHGLA RAIGMDASLFSFVFLVLGLLLLYSGIRAFMRRSIVGGVIWTVLGLIVMSWLIH" gene complement(550867..551793) /locus_tag="PA0491" /db_xref="GeneID:877693" CDS complement(550867..551793) /locus_tag="PA0491" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249182.1" /db_xref="GeneID:877693" /translation="MLPMALTLRQVRYFIATAEFGQISQAAIHLNISQSAVTSAIQEL EGMLGVALFTRTAQGMNLTDSGRHFLNHAYSIQRSVDDALNSPQPDTRVEGTLKVAAS YTVMGYFLPHHLQRLAQWYPELELQLFEDERASIERGLLDGRYDIAVLLTGNLTEPGI AAETLFNSERRLWLPSRHPLGEKADLGLADVAGEPYIMLTVDEAGQSALRYWQQSGHR PQVILHTSSVEAVRSMVANGSGVAILSDLVYRPWSLEGKRIETLSLVDPVPSMSVGLA WRRDTEASAGMRAFREYFRQSFLAPQQSSSRR" misc_feature complement(551593..551772) /locus_tag="PA0491" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(550912..551508) /locus_tag="PA0491" /note="The C-terminal substrate-binding domain of putative LysR-type transcriptional regulator PAO1-like, a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_PAO1_like; cd08412" /db_xref="CDD:176104" misc_feature complement(order(551059..551061,551110..551112, 551182..551184,551284..551286,551341..551343, 551470..551472,551482..551484)) /locus_tag="PA0491" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176104" misc_feature complement(order(551026..551031,551050..551052, 551080..551085,551092..551097,551107..551115, 551119..551127,551143..551148,551371..551373, 551380..551382,551404..551406,551410..551412, 551449..551454,551458..551463,551470..551478)) /locus_tag="PA0491" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176104" gene 551911..552669 /locus_tag="PA0492" /db_xref="GeneID:879645" CDS 551911..552669 /locus_tag="PA0492" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249183.1" /db_xref="GeneID:879645" /translation="MTEVDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGD PSSMRRTVEMAAEHGVAIGAHPGFRDLVGFGRRHIAAPAIELVNDMLYQLGALREFAR LQGLSLQHVKPHGALYMHLARDEVAARLFVETLQRLEPELLLYCMPGSATWRIGRELG QPLVREFYADRDYDRSGSIVFTRRVAALDPQQVADKVLRACREGKVRTVEGEDLDIAF DSVCIHSDTPGALELVASTRARLEGAGIRIKAPR" misc_feature 551911..552642 /locus_tag="PA0492" /note="hypothetical protein; Provisional; Region: PRK12569" /db_xref="CDD:237141" misc_feature order(551935..551937,552103..552105,552136..552138, 552244..552246,552250..552255,552265..552267, 552412..552414,552421..552423,552445..552447, 552454..552456,552580..552582) /locus_tag="PA0492" /note="putative active site [active]" /db_xref="CDD:212129" gene 552746..552994 /locus_tag="PA0493" /db_xref="GeneID:878648" CDS 552746..552994 /locus_tag="PA0493" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase biotin carboxyl carrier protein subunit" /protein_id="NP_249184.1" /db_xref="GeneID:878648" /translation="MAEHNVQSPLPGTFYRKASPDAPPYAEVGQAVEAGSVIGLIEVM KQFSEVQAGQAGILQAFHVEDGEAIEPGQVLAVIASAT" misc_feature 552746..552985 /locus_tag="PA0493" /note="biotin carboxyl carrier domain-containing protein; Region: PRK07051" /db_xref="CDD:180811" misc_feature order(552848..552850,552875..552883,552902..552904) /locus_tag="PA0493" /note="carboxyltransferase (CT) interaction site [active]" /db_xref="CDD:133459" misc_feature 552878..552880 /locus_tag="PA0493" /note="biotinylation site [posttranslational modification]; other site" /db_xref="CDD:133459" gene 553005..554381 /locus_tag="PA0494" /db_xref="GeneID:877712" CDS 553005..554381 /locus_tag="PA0494" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase biotin carboxylase subunit" /protein_id="NP_249185.1" /db_xref="GeneID:877712" /translation="MHKRLNKLLVANRGEIAVRIIRAAQALGIPTVAVCSEADRDSLA ARLADEVRLIGPARADRSYLDIEAILMAARETGADSIHPGYGFLSENPAFAEAVQAAG LVFVGPEAQTIRRMGDKAEARRTAMAAGVPVVPGSPGELGDLDAALACAEEVGYPLLV KASAGGGGRGIRIAHDADELRREFPIAQREAQAAFGSPAVYLERFIRQARHIEVQILG DGERAVHLFERECSLQRRRQKVFEEAPSAALDGAQRQALCESAVRLAQSLGYRGAGTL EYLFDAHSGEFFFIEMNTRIQVEHPVSEMVTGIDLVQAMLRIAAGEALPWRQEDIRLN GAALEMRINAEDPARNFFPSPGTVERLEWPQGEGVRVDSHLYPGYRVPPYYDSLLAKL IVHGRDRDEAFARARQALERTVLAGMATTLPLHRWLLADARVQAAQFDTATLETWLAE RTAAAQEV" misc_feature 553005..554372 /locus_tag="PA0494" /note="acetyl-CoA carboxylase biotin carboxylase subunit; Provisional; Region: PRK12833" /db_xref="CDD:183781" protein_bind complement(553118..553130) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0494" /bound_moiety="AmrZ" gene 554383..555261 /locus_tag="PA0495" /db_xref="GeneID:878118" CDS 554383..555261 /locus_tag="PA0495" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249186.1" /db_xref="GeneID:878118" /translation="MHANIRYSFGGDEHLFAEVAEAMSLEAFFRGMAITRAIEALQLP GVLDVCLANASFQVRFDPDRLAPQALLETVRGLEAEAVAARSIETRIVEVPVLYNDPW THETLMRFRDRHQDPDSTDLEYAARINGYADVQAFIQAHSGTPWFVSMVGFVAGLPFM YQMVERERQLQVPKYLRPRIDTPKLTLGHGGCFGCIYSVRGAGGYQMFGVTPAPIFDP RQGLPYLEESMVFFRAGDIVQFRPIERTEYEHMAAEVESGTFDLRIRPVSFDLDAFLA DPRGCTQHLQEVLHVD" misc_feature 554383..555147 /locus_tag="PA0495" /note="5-oxoprolinase subunit B/Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]; Region: PxpB; COG2049" /db_xref="CDD:441652" gene 555251..556228 /locus_tag="PA0496" /db_xref="GeneID:879583" CDS 555251..556228 /locus_tag="PA0496" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249187.1" /db_xref="GeneID:879583" /translation="MSIKVLKPGLATSVQDAGREGHYHLGIPPSGALDQYALRAANLL VGNAPTAAVLECALLGPQLEFQRDALVAVCGARMTPRLEGAEMPLDTSFRVRAGQVLG FDFIRAGARGYLAIDGGIAVPEVLGSRSTYGLGAIGGLQGRRLAEGDLLPLGPASPSA VEGLALPRSLQVEVGGEVSLRVVPGLYVHRLTPDAVERFFAETWTVGSEADRTGYRFK GGTALRFEPREQPFGAGSDPSNIVDACYPIGSIQVPGGLEPIVLHRDAVSGGGYATLG TVISPDLNRLAQMQPNQKGRFVAVSLEEGLEARRRYNWQVQRLQHFFLR" misc_feature 555251..556147 /locus_tag="PA0496" /note="5-oxoprolinase subunit C/Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]; Region: PxpC; COG1984" /db_xref="CDD:441587" gene complement(556275..557276) /locus_tag="PA0497" /db_xref="GeneID:878092" CDS complement(556275..557276) /locus_tag="PA0497" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249188.1" /db_xref="GeneID:878092" /translation="MNAFIRYMLVAMLLVLSQKSFALMCWKSDNKQTEDYVYIDTSIA VPSVLPKDTVLWRSPNYSISITCFQDRDWGPEQVYFYLSPTGQGALGSDLEVGINLNG EDLRCSTLDKCRKEIGMHFDGCWTGRGCEGRAKKMTVNFNFFLSKRAGPSTGKEGPIT GVNAYPIFQFDGESAINNIGGYNFRMTLHGLNNLRYVACASTISLSPKTVDFQSLQAY FASRDQILKELPFSVTANKNCSSAYGLNAMFLPSGSTSLWGSDTLLDNNNKSVGIRLL KQEDRSIIDIGKEFVLVPNSQNQLVVIRNFLAQVRWMTGTPTPGPFNATAAIEVYYK" misc_feature complement(556278..556730) /locus_tag="PA0497" /note="Fimbrial protein; Region: Fimbrial; pfam00419" /db_xref="CDD:425671" gene complement(557354..558361) /locus_tag="PA0498" /db_xref="GeneID:878273" CDS complement(557354..558361) /locus_tag="PA0498" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249189.1" /db_xref="GeneID:878273" /translation="MNAITRTLLVGMLVALAQKGYALTCERADNKATIDYVNIDTSIA VPSALPKDTVLWRSPTYDFSVRCYQERENTGPEDVYFYLSPDGQGALGSDLEVGINLN GEDLRCSSLPGCRQKIGMHFDGCWTGGRGGCEGMAQTKQVRFQIFLSKLAAPTPGKEG PITGVNSYALFQFDGVGGINNLGGRNLRMYALGMNNLRYVACTSTLSISPKTLNFQIL QSQFAAQNLVIKELPFSITANKSCNSAYGLNAMFIPASNTTLSSTDTLLAKDNPTVGI RLLNEDRSVISIGKEFEFIPYTPTQTTVTKNFLAQLRWMTSRPILGPFNATAAIEVYY K" misc_feature complement(557357..557773) /locus_tag="PA0498" /note="Fimbrial protein; Region: Fimbrial; pfam00419" /db_xref="CDD:425671" gene complement(558377..559078) /locus_tag="PA0499" /db_xref="GeneID:879461" CDS complement(558377..559078) /locus_tag="PA0499" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="pili assembly chaperone" /protein_id="NP_249190.1" /db_xref="GeneID:879461" /translation="MVLASIFAWLCMSAHADLSFDGQNRFVMKGKRLPITLVNEGKEP ALAEISLDWGTDGKGQALPFAVSRPLLRLGAGQRAKVEVLYQGQGLPTDRETYLLLSV LDVPHAPSTPETLQIALRHRFKLFYRPPLEATVEQAIEGVTWTLGTSGNPKAHNPSPY HITFSQLEFLDASERSCGEAIEHLMLAPFSNHQFDIAACHPDKVRYAIVSDGGNLHPY HGALKSGVETNAKHP" misc_feature complement(558413..559078) /locus_tag="PA0499" /note="P pilus assembly protein, chaperone PapD [Extracellular structures]; Region: FimC; COG3121" /db_xref="CDD:442355" gene 559644..560702 /gene="bioB" /locus_tag="PA0500" /db_xref="GeneID:877668" CDS 559644..560702 /gene="bioB" /locus_tag="PA0500" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="biotin synthase" /protein_id="NP_249191.1" /db_xref="GeneID:877668" /translation="MSATASVATRHDWSLAEVRALFEQPFNDLLFQAQTVHRAHFDPN RVQVSTLLSIKTGACPEDCKYCPQSGHYNTGLDKEKLMEVQKVLEAAAEAKAIGSTRF CMGAAWKHPSAKDMPYVLEMVKGVKKLGLETCMTLGRLTQEQTQALADAGLDYYNHNL DTSPEFYGNIITTRTYSERLQTLAYVREAGMKICSGGILGMGESVDDRAGLLIQLANL PEHPESVPINMLVKVKGTPLAEEKDVDPFDFIRTLAVARIMMPKSHVRLSAGREQMNE QMQALAFMAGANSIFYGEKLLTTKNPQAEKDMQLFARLGIKPEEREEHADEVHQAAIE QALVEQRESKLFYNAASA" misc_feature 559677..560597 /gene="bioB" /locus_tag="PA0500" /note="Biotin synthase or related enzyme [Coenzyme transport and metabolism]; Region: BioB; COG0502" /db_xref="CDD:440268" gene 560808..562013 /gene="bioF" /locus_tag="PA0501" /db_xref="GeneID:879619" CDS 560808..562013 /gene="bioF" /locus_tag="PA0501" /EC_number="2.3.1.47" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="8-amino-7-oxononanoate synthase" /protein_id="NP_249192.1" /db_xref="GeneID:879619" /translation="MSFDLASRLASRRAEDLYRQRPLLESAQGPDVVVDGQPLLAFCS NDYLGLANHPEVIAALRAGAERWGVGGGASHLVVGHSGPHHELELALAEFTGRPRALL FSTGYMANLGAVAALVGKGDTVLEDRLNHASLLDAGLLSGARFSRYLHNDPASLAARL DKAEGNTLVVTDGVFSMDGNLADLPALAAVAQARGAWLMVDDAHGFGPLGASGGGIVE HFGLGQEQVPVLIGTLGKGFGTAGAFVAGSEELIETLIQYARPYIYTTSQPPAVACAT LKSLELLRRESWRRQHLAALIARFRHGAEALGLTLMDSFTPIQPILVGGSRQAVALAG MLRARGIMVGAIRPPTVPANSARLRVTLSAAHSEAQVDRLLEALGESWRQLSSSLLAE IEAEEGDDA" misc_feature 560808..561953 /gene="bioF" /locus_tag="PA0501" /note="8-amino-7-oxononanoate synthase; Reviewed; Region: PRK05958" /db_xref="CDD:235655" misc_feature order(560940..560942,561120..561128,561198..561200, 561321..561323,561333..561338,561408..561410, 561414..561419,561504..561506,561513..561515, 561882..561884) /gene="bioF" /locus_tag="PA0501" /note="substrate-cofactor binding pocket [active]" /db_xref="CDD:99747" misc_feature order(561120..561128,561198..561200,561321..561323, 561333..561335,561408..561410,561414..561419, 561504..561506,561513..561515) /gene="bioF" /locus_tag="PA0501" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99747" misc_feature 561513..561515 /gene="bioF" /locus_tag="PA0501" /note="catalytic residue [active]" /db_xref="CDD:99747" gene 562006..562728 /locus_tag="PA0502" /db_xref="GeneID:878654" CDS 562006..562728 /locus_tag="PA0502" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="biotin biosynthesis protein BioH" /protein_id="NP_249193.1" /db_xref="GeneID:878654" /translation="MRDHLILLPGWGLGSAPLEPLRDALHEREPHLNVLIEPLPSLDD AADWLDELDDNLPRDSWLAGWSLGGMLAGELAARRGDDCRGLLTLASNPCFRVREDWP NAMPAETFEDFFEAFLLEPHLTRKRFTLLVSQGARDPRTLARQLQVALPQLEREALVA GLQLLGQLDTRAALENFRGPQLHLFAEADALVPLAAAEALLEWLPDVEVSTLAASHGL PLECPDEVAGAILRFLREGDDA" misc_feature 562015..562704 /locus_tag="PA0502" /note="A functionally diverse superfamily containing proteases, lipases, peroxidases, esterases, epoxide hydrolases and dehalogenases. The catalytic apparatus typically involves three residues (catalytic triad): a serine, a glutamate or aspartate and a...; Region: alpha/beta hydrolases; cl21494" /db_xref="CDD:473884" gene 562721..563545 /locus_tag="PA0503" /db_xref="GeneID:878488" CDS 562721..563545 /locus_tag="PA0503" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="biotin synthesis protein BioC" /protein_id="NP_249194.1" /db_xref="GeneID:878488" /translation="MPDDSSPLLAPHGVAALPDKRQVAASFSRAAASYDAVAELQRGV GESLLSALPEGFSPRRWVDLGCGTGYFSRALERRFGAAEGLAVDIAEGMLRHARARGG ASHFIGGDAERLPLRDGSCDLLFSSLAIQWCADLPAVLAEARRVLRPGGVLAFSSLCV GTLGELRDSWRVVDGFVHVNRFRAFADYLQHAAGSGLLPLTLRHEDRLLHFPDLRSLT HELKALGAHNLNPGRPDGLTGRQRIRALVAAYERFRQPEGLPATYRVVFGVLRKDS" misc_feature 562820..563536 /locus_tag="PA0503" /note="malonyl-acyl carrier protein O-methyltransferase BioC; Region: BioC; TIGR02072" /db_xref="CDD:273953" gene 563549..564235 /gene="bioD" /locus_tag="PA0504" /db_xref="GeneID:878220" CDS 563549..564235 /gene="bioD" /locus_tag="PA0504" /EC_number="6.3.3.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP-dependent dethiobiotin synthetase BioD" /protein_id="NP_249195.1" /db_xref="GeneID:878220" /translation="MPAFFVTGTDTEIGKTTIAAGLLHAARSAGLSTAAAKPVASGCE PTAQGLRNGDALVLLGQCSLALAYEQVNPLAFAPAIAPHLAAREAGVELSAARLHEAV REVLALQADFTLVEGAGGWRVPLLGRENLSDLARLLALPVVLVVGVRLGCINHALLSA EAILGDGLALAGWVANVVDPATSRLEENLATLAERLPAPCLGRVPRLEEATPAAVAAH LDLRPLGIGL" misc_feature 563549..564217 /gene="bioD" /locus_tag="PA0504" /note="Dethiobiotin synthetase [Coenzyme transport and metabolism]; Region: BioD; COG0132" /db_xref="CDD:439902" gene 564344..564574 /locus_tag="PA0505" /db_xref="GeneID:880873" CDS 564344..564574 /locus_tag="PA0505" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249196.1" /db_xref="GeneID:880873" /translation="MEISGNAFVSGLNAVQSGSARVAQAGSEIARNTVEARSAQAEQM VELTRGKLEAQSGARVIEVADETLGTLIDTHA" gene 564914..566719 /locus_tag="PA0506" /db_xref="GeneID:878586" CDS 564914..566719 /locus_tag="PA0506" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_249197.1" /db_xref="GeneID:878586" /translation="MPDYKAPLRDIRFVRDELLGYEAHYQSLPGAEDATPDMVNAILE EGAKFCEQVIAPLNRVGDLEGCTWSADGVKTPTGFKEAYQQFVEGGWPSLAHDVEHGG QGLPESLGLAISEMVGQANWSWGMYPGLSHGAMNTLHAHGTAEQQATYLTKLVSGEWT GTMCLTEPHCGTDLGMLRTKAEPQADGSYKVTGTKIFISAGEHDMADNIVHIVLARLP DAPQGTKGISLFIVPKFLPNAEGNAGERNAVSCGSIEHKMGIHGNATCVMNFDAATGF LIGPPNKGLNCMFTFMNTARLGTALQGLAHAEVGFQGGIAYARERLQMRSLTGPKAPE KPADPIIVHPDVRRMLLTMKAFAEGNRAMLYFAAKQVDIVQRSQDEEQKKAADSMLAF LTPIAKAFMTEVGFESANHGVQIFGGHGFIAEHGMEQNVRDSRISMLYEGTTGVQALD LLGRKVLMTQGEALKGFTKIVHKFCQANEANEAVKEFVAPLAQLNKEWGDLTMKVGMA AMKDREEVGAASVDYLMYSGYACLAYFWADMARLAAEKLAAGTGEEAFYKAKLQTARF YFQRILPRTRAHVAAMLSGANNLMEMAEEDFALGY" misc_feature 564923..566710 /locus_tag="PA0506" /note="acyl-CoA dehydrogenase; Provisional; Region: PTZ00456" /db_xref="CDD:185635" gene 566932..568728 /locus_tag="PA0507" /db_xref="GeneID:878181" CDS 566932..568728 /locus_tag="PA0507" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_249198.1" /db_xref="GeneID:878181" /translation="MPEYKAPLRDMRFLIDEVFDFHGRYQALGASDATPDMVAAILDE GSKFCEQVLAPLNRSGDEEGCHFDNGVVTTPKGFKEAYAQYVEGGWNGVASDPAYGGQ GLPHSLGLLLSEMIGASNVSWGMYPGLTRGAMSAIHAHGSQAQKDLYLARMTAGTWTG TMCLTEPHCGTDLGIIKTRAVPNADGSHAISGTKIFISAGEHDLSENIVHLVLAKLPD APAGTKGISLFIVPKFLPDAEGNVGARNAVSCGSIEHKMGIKASATCVMNFDGATGYL IGEPNKGLHCMFTMMNHARLGTGMQGLCLGETSYQGAVRYARERLQMRSLTGPKAPDK PADPIIVHPDVRRMLLTMKAFNEGNRALAYFTAQLLDTEHLSQDAAERERAADLLAFL TPICKAFMTETGQEVTNLGMQVYGGHGYIREWGMEQLVRDCRIAQIYEGTNGIQALDL LGRKVLGSQGKLLRGFTKLVHQLCQAQAEHPQLKGQVAQLAALNAQWGELTQQVGLAA MKNADEVGAASVDYLMFSGYVTLAYFWLRIALVAREKLDAGSGEAAFYEAKLATADFY FSRLLPRTAAHAAAIQAGAAGLMSLSAEQFSL" misc_feature 566938..568650 /locus_tag="PA0507" /note="acyl-CoA dehydrogenase; Provisional; Region: PTZ00456" /db_xref="CDD:185635" gene 569002..570780 /locus_tag="PA0508" /db_xref="GeneID:880863" CDS 569002..570780 /locus_tag="PA0508" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_249199.1" /db_xref="GeneID:880863" /translation="MADYKAPLRDMRFVLNEVFEVSRLWAQLPALAEVVDAETAAAIL EEAGKVTAGTIAPLNRPGDEEGCQWNAGAVSTPAGFPEAYRTYAEGGWVGVGGDPAYG GMGMPKVISAQVEELVNSANLSFGLYPMLTAGACLALNAHASDELKDKYLPNMYAGIW AGSMCLTEPHAGTDLGIIRTRAEPQADGSYKISGTKIFITGGEHDLTENIIHLVLAKL PDAPAGPKGISLFLVPKVLVNADGSLGEKNSLGCGSIEHKMGIKASATCVMNFDGATG WLVGEVNKGLAAMFTMMNYERLGVGIQGLATGERSYQSAIEYARERIQSRAPTGPVAK DKAADPIIVHPDVRRMLLTMKALNEGGRAFSSYVAMQLDTAKYSEDAVTRKRAEELVA LLTPVAKAFLTDMGLETTIHGQQIFGGHGFIREWGQEQLVRDCRITQIYEGTNGIQAL DLVGRKVIGSGGAFSRHFTDEIKAFVASADEALGEFSKPLAAAVENLEELTAWLLDRA KGNPNEIGAASVEYLHVFGYTAYAYMWALMARTALAKQGEDDFYASKLGTARFYFARL LPRIHSLSASVRAGSESLYLLDAEQF" misc_feature 569011..570747 /locus_tag="PA0508" /note="acyl-CoA dehydrogenase; Provisional; Region: PTZ00456" /db_xref="CDD:185635" gene complement(571111..572592) /gene="nirN" /locus_tag="PA0509" /db_xref="GeneID:878428" CDS complement(571111..572592) /gene="nirN" /locus_tag="PA0509" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cytochrome C" /protein_id="NP_249200.1" /db_xref="GeneID:878428" /translation="MRLIGLALGLLLGALAQAGEAPGEALYRQHCQACHGAGRLGGSG PTLLPESLSRLKPAQAREVILHGRPATQMAGFAGQLDDAAADALVAYLYQAPPREPQW SAEDIRASQVQPHPLATLPSRPRFEADPLNLFVVVESGDHHVTILDGDRFEPIARFPS RYALHGGPKFSPDGRLVYFASRDGWVTLYDLYNLKVVAEVRAGLNTRNLAVSDDGRWV LVGNYLPGNLVLLDARDLSLVQVIPAADAQGQASRVSAVYTAPPRHSFVVALKDVHEL WELPYANGKPVAPKRLAVADYLDDFSFSPDYRYLLGSSRQARGGEVIELDSGARVASI PLSGMPHLGSGIYWKRDGRWVFATPNISRGVISVIDLQNWKPLKEIVTDGPGFFMRSH ADSPYAWTDTFLGKKHDEILLIDKQTLEIAHRLRPSPGKVAGHVEFTRDGRYALLSVW DRDGALVVYDAHSLEEVKRLPMNKPSGKYNVGNKIGYAEGTSH" misc_feature complement(572356..>572532) /gene="nirN" /locus_tag="PA0509" /note="Cytochrome c, mono- and diheme variants [Energy production and conversion]; Region: CccA; COG2010" /db_xref="CDD:441613" misc_feature complement(571144..572295) /gene="nirN" /locus_tag="PA0509" /note="eight-bladed heme d1-binding beta-propeller domain in dihydro-heme d1 dehydrogenase NirN; Region: 8prop_heme-binding_NirN; cd20777" /db_xref="CDD:467721" misc_feature complement(order(571747..571752,571801..571803, 571897..571899,571942..571947,571951..571953, 572254..572256)) /gene="nirN" /locus_tag="PA0509" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:467721" misc_feature complement(572113..572208) /gene="nirN" /locus_tag="PA0509" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467721" misc_feature complement(571990..572109) /gene="nirN" /locus_tag="PA0509" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467721" misc_feature complement(571990..572109) /gene="nirN" /locus_tag="PA0509" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature complement(order(571156..571158,571162..571167, 571243..571245,571288..571290,571510..571512, 571570..571572,571693..571695,571819..571821, 571825..571827,571969..571974,572047..572049, 572086..572088,572092..572103)) /gene="nirN" /locus_tag="PA0509" /note="heme D binding site [chemical binding]; other site" /db_xref="CDD:467721" misc_feature complement(571861..571980) /gene="nirN" /locus_tag="PA0509" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467721" misc_feature complement(571855..571971) /gene="nirN" /locus_tag="PA0509" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature complement(571714..571833) /gene="nirN" /locus_tag="PA0509" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature complement(571714..571827) /gene="nirN" /locus_tag="PA0509" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467721" misc_feature complement(571591..571713) /gene="nirN" /locus_tag="PA0509" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467721" misc_feature complement(571447..571590) /gene="nirN" /locus_tag="PA0509" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467721" misc_feature complement(571312..571443) /gene="nirN" /locus_tag="PA0509" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467721" misc_feature complement(571180..571308) /gene="nirN" /locus_tag="PA0509" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467721" gene complement(572583..573422) /locus_tag="PA0510" /db_xref="GeneID:881871" CDS complement(572583..573422) /locus_tag="PA0510" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="uroporphyrin-III C-methyltransferase" /protein_id="NP_249201.1" /db_xref="GeneID:881871" /translation="MNTTVIPPSLLDVDFPAGSVALVGAGPGDPGLLTLRAWALLQQA EVVVYDRLVARELIALLPESCQRIYVGKRCGHHSLPQEEINELLVRLARQQRRVVRLK GGDPFIFGRGAEELERLLEAGVDCQVVPGVTAASGCSTYAGIPLTHRDLAQSCTFVTG HLQNDGRLDLDWAGLARGKQTLVFYMGLGNLAEIAARLVEHGLASDTPAALVSQGTQA GQQVTRGALAELPALARRYQLKPPTLIVVGQVVALFAERAMAHPSYLGAGSPVSREAV ACA" misc_feature complement(572664..573371) /locus_tag="PA0510" /note="Uroporphyrinogen-III methylase (siroheme synthase) [Coenzyme transport and metabolism]; Region: CysG; COG0007" /db_xref="CDD:439778" gene complement(573433..574596) /gene="nirJ" /locus_tag="PA0511" /db_xref="GeneID:879503" CDS complement(573433..574596) /gene="nirJ" /locus_tag="PA0511" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="heme d1 biosynthesis protein NirJ" /protein_id="NP_249202.1" /db_xref="GeneID:879503" /translation="MLRISHYLRSLTEDAPTPRRAGGRRAPVVIWNLLRRCNLTCKHC YSTSADSDFRGELETAEILRGIDDLRAAGVRVLILSGGEPLMHPDLFEIAAHARQAGM FVALSSNGTLIDEGNIQRVAEARFDYVGISLDGLRETHDRFRQKQGSFDAALAAMRLC READIRVGMRTTLTEENAAQLPALLDLMRELDVQKFYLSHLNYSGRGRRSRALDAHHR RTREALALLFERADQDIRQGRDSDFVTGNNDADAILLLDWLKRRRPQQLARLCELLLD WGGNASGEGIANIDNTGEVHPDSYWWHHSVGNIRHQRFADFWFERPDPLLLQLRQRPR PVVGRCSQCRWLDICNGNTRTRAWAGGELWGEDPGCYLSDQEIGLERIALHAV" misc_feature complement(573463..574521) /gene="nirJ" /locus_tag="PA0511" /note="heme d1 biosynthesis radical SAM protein NirJ; Region: rSAM_NirJ; TIGR04051" /db_xref="CDD:188566" gene complement(574590..575105) /locus_tag="PA0512" /db_xref="GeneID:877584" CDS complement(574590..575105) /locus_tag="PA0512" /note="possible siroheme decarboxylase subunit" /codon_start=1 /transl_table=11 /product="heme d1 biosynthesis protein NirH" /protein_id="NP_249203.1" /db_xref="GeneID:877584" /translation="MSACISPSDALLARRLIELTQAGLPLVADPWAWIAAQLRLSEAE TLALLKRLRDAGVIRRIAAVPNHYRLGYRHNGMTVWDVADERIERLGRLVGGLSFVSH CYRRPRHLPQWRYNLFAMVHGRSEAEIEGYRQQIRLLLGEDCRADEMLVSSRILKKTG LRLAQKEERPC" misc_feature complement(574791..575066) /locus_tag="PA0512" /note="helix_turn_helix ASNC type; Region: HTH_ASNC; smart00344" /db_xref="CDD:214628" misc_feature complement(574635..574901) /locus_tag="PA0512" /note="AsnC-like ligand binding domain; Region: AsnC_trans_reg2; pfam17805" /db_xref="CDD:436059" gene complement(575080..575523) /locus_tag="PA0513" /db_xref="GeneID:877708" CDS complement(575080..575523) /locus_tag="PA0513" /note="possible siroheme decarboxylase subunit" /codon_start=1 /transl_table=11 /product="heme d1 biosynthesis protein NirG" /protein_id="NP_249204.1" /db_xref="GeneID:877708" /translation="MDEFDRRLLNRLQHGLPLEPHPYALLAAELDCREEDILRRLDDL LDDGTLTRFGPLFDIEPLGGAFTLAAMSVPEARFEEIAALLAGWPQVAHNYRREHALN MWLVVACDSPAEVAETLARLERESGLAVLDLPKEATYHVGLHFPL" misc_feature complement(575137..575523) /locus_tag="PA0513" /note="DNA-binding transcriptional regulator, Lrp family [Transcription]; Region: Lrp; COG1522" /db_xref="CDD:441131" gene complement(575516..576040) /gene="nirL" /locus_tag="PA0514" /db_xref="GeneID:879762" CDS complement(575516..576040) /gene="nirL" /locus_tag="PA0514" /note="possible siroheme decarboxylase subunit" /codon_start=1 /transl_table=11 /product="heme d1 biosynthesis protein NirL" /protein_id="NP_249205.1" /db_xref="GeneID:879762" /translation="MNPVEPLAAPQRQHLRYLLEQGLPLASRPYRVLAERIGAGEDEV LEQVRRWDEDGLFRRFGVILHHRALGYTANAMLVLDVADAEVDAVGRALAHETIVSLC YRRPRRLPMWPYNLFCMIHGRERGEVERQIEALLERHALRQTPHRWLFSLRAYKQCGG RYTAPPADLERRHG" misc_feature complement(575555..575989) /gene="nirL" /locus_tag="PA0514" /note="siroheme decarboxylase subunit beta; Region: Siroheme_Dcarb_AhbB; NF040707" /db_xref="CDD:468671" gene complement(576037..576489) /locus_tag="PA0515" /db_xref="GeneID:879538" CDS complement(576037..576489) /locus_tag="PA0515" /note="possible siroheme decarboxylase" /codon_start=1 /transl_table=11 /product="heme d1 biosynthesis protein NirD" /protein_id="NP_249206.1" /db_xref="GeneID:879538" /translation="MDDLSRRLLARYQKGLPICAEPYRRMAETLGCSEAEVLERLRRL EADGALSRVGPVLRHQRAGASTLAALAVPEERLQRVAERISQYAEVNHNYQREHRYNL WFVLTAGDRAQLDRVLAEIAADTGLQPLDLPMQEAYCIDLAFPLEASR" misc_feature complement(576049..576489) /locus_tag="PA0515" /note="siroheme decarboxylase subunit alpha; Region: Siroheme_Dcarb_AhbA; NF040708" /db_xref="CDD:468672" gene complement(576498..577676) /gene="nirF" /locus_tag="PA0516" /db_xref="GeneID:882198" CDS complement(576498..577676) /gene="nirF" /locus_tag="PA0516" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="heme d1 biosynthesis protein NirF" /protein_id="NP_249207.1" /db_xref="GeneID:882198" /translation="MNLRPLAPLLLTLLAGCSQQPPLRGSGDLGVLIERADGSVQILD GTAKTSLARVEGLGDLSHASLVFSRDQRYAYVFGRDGGLTKLDLLAQRIDKRLIQGGN SIGGAISQDGRLVAVSNYEPGGVKVFDSRTLELVAEIPATRLPGQDRNSRVVGLVDAP GQRFVFSLFDSGEIWIADFSQGDTPHLTRFRDIGKQPYDALISPDGRYYMAGLFGEDG MAQLDLWHPERGVRRVLGDYGRGQRKLPVYKMPHLEGWTIASDQAFVPAVGHHQVLVL DARDWKQTDAIDVAGQPVFVMTRPDDRQIWVNFAYPDNDKVQVIDSETHEVIETLRPG PGVLHMEFSGRGDQVWISVRDADQLQVWDPYRLKRIGSLPARSPSGIFFSHRAQHIGL " misc_feature complement(576504..577616) /gene="nirF" /locus_tag="PA0516" /note="eight-bladed heme d1-binding beta-propeller domain in cytochrome cd1 nitrate reductase NirF; Region: 8prop_hemeD1_NirF; cd20778" /db_xref="CDD:467722" misc_feature complement(577512..577604) /gene="nirF" /locus_tag="PA0516" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467722" misc_feature complement(order(576531..576533,576537..576542, 576615..576617,576660..576662,576864..576866, 576921..576923,577080..577085,577203..577211, 577359..577367,577440..577442,577479..577481, 577572..577574)) /gene="nirF" /locus_tag="PA0516" /note="heme D binding site [chemical binding]; other site" /db_xref="CDD:467722" misc_feature complement(577383..577481) /gene="nirF" /locus_tag="PA0516" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467722" misc_feature complement(577254..577373) /gene="nirF" /locus_tag="PA0516" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467722" misc_feature complement(577095..577211) /gene="nirF" /locus_tag="PA0516" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467722" misc_feature complement(576939..577088) /gene="nirF" /locus_tag="PA0516" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467722" misc_feature complement(576798..576929) /gene="nirF" /locus_tag="PA0516" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467722" misc_feature complement(576681..576791) /gene="nirF" /locus_tag="PA0516" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467722" misc_feature complement(576552..576668) /gene="nirF" /locus_tag="PA0516" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467722" gene complement(577673..578032) /gene="nirC" /locus_tag="PA0517" /db_xref="GeneID:879462" CDS complement(577673..578032) /gene="nirC" /locus_tag="PA0517" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cytochrome c55X" /protein_id="NP_249208.1" /db_xref="GeneID:879462" /translation="MNAPPDFRRAASHALWLALALTFACPLPGLADEHPDARRQAQLR HLLLQDCGSCHGLRLTGGLGPALTPEALRGKPRESLVATVLMGRPQTPMPPWAGLLSE DDAGWLVDRLIEGEIAP" misc_feature complement(577703..>578005) /gene="nirC" /locus_tag="PA0517" /note="Cytochrome c, mono- and diheme variants [Energy production and conversion]; Region: CccA; COG2010" /db_xref="CDD:441613" gene complement(578029..578343) /gene="nirM" /locus_tag="PA0518" /db_xref="GeneID:882220" CDS complement(578029..578343) /gene="nirM" /locus_tag="PA0518" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="cytochrome C-551" /protein_id="NP_249209.1" /db_xref="GeneID:882220" /translation="MKPYALLSLLATGTLLAQGAWAEDPEVLFKNKGCVACHAIDTKM VGPAYKDVAAKFAGQAGAEAELAQRIKNGSQGVWGPIPMPPNAVSDDEAQTLAKWVLS QK" misc_feature complement(578032..578280) /gene="nirM" /locus_tag="PA0518" /note="Cytochrome c551/c552 [Energy production and conversion]; Region: CytC552; COG4654" /db_xref="CDD:443692" gene complement(578394..580100) /gene="nirS" /locus_tag="PA0519" /db_xref="GeneID:882217" CDS complement(578394..580100) /gene="nirS" /locus_tag="PA0519" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="nitrite reductase" /protein_id="NP_249210.1" /db_xref="GeneID:882217" /translation="MPFGKPLVGTLLASLTLLGLATAHAKDDMKAAEQYQGAASAVDP AHVVRTNGAPDMSESEFNEAKQIYFQRCAGCHGVLRKGATGKPLTPDITQQRGQQYLE ALITYGTPLGMPNWGSSGELSKEQITLMAKYIQHTPPQPPEWGMPEMRESWKVLVKPE DRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYL LVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFA IMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNY KDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKT PHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLF IKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQ PEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLITPTGKFNVYNTQHD VY" misc_feature complement(579681..>580016) /gene="nirS" /locus_tag="PA0519" /note="Cytochrome c, mono- and diheme variants [Energy production and conversion]; Region: CccA; COG2010" /db_xref="CDD:441613" misc_feature complement(578418..579758) /gene="nirS" /locus_tag="PA0519" /note="eight-bladed heme d1-binding beta-propeller domain in cytochrome cd1 nitrate reductase NirS; Region: 8prop_hemeD1_NirS; cd20779" /db_xref="CDD:467723" misc_feature complement(order(578952..578960,579063..579089, 579117..579119,579198..579206,579219..579221, 579225..579227,579231..579245,579663..579668, 579672..579674)) /gene="nirS" /locus_tag="PA0519" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:467723" misc_feature complement(579489..579590) /gene="nirS" /locus_tag="PA0519" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467723" misc_feature complement(order(578427..578429,578433..578438, 578532..578534,578577..578579,578751..578756, 578910..578912,579045..579047,579171..579179, 579291..579293,579345..579353,579432..579434, 579471..579473,579477..579482,579558..579560)) /gene="nirS" /locus_tag="PA0519" /note="heme D binding site [chemical binding]; other site" /db_xref="CDD:467723" misc_feature complement(579366..579473) /gene="nirS" /locus_tag="PA0519" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467723" misc_feature complement(579228..579365) /gene="nirS" /locus_tag="PA0519" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467723" misc_feature complement(579063..579188) /gene="nirS" /locus_tag="PA0519" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467723" misc_feature complement(578934..579062) /gene="nirS" /locus_tag="PA0519" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467723" misc_feature complement(578772..578933) /gene="nirS" /locus_tag="PA0519" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467723" misc_feature complement(578625..578750) /gene="nirS" /locus_tag="PA0519" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467723" misc_feature complement(578460..578588) /gene="nirS" /locus_tag="PA0519" /note="propeller blade [structural motif]; Region: propeller blade" /db_xref="CDD:467723" gene 580316..581098 /gene="nirQ" /locus_tag="PA0520" /db_xref="GeneID:882214" CDS 580316..581098 /gene="nirQ" /locus_tag="PA0520" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="denitrification regulatory protein NirQ" /protein_id="NP_249211.1" /db_xref="GeneID:882214" /translation="MRDATPFYEATGHEIEVFERAWRHGLPVLLKGPTGCGKTRFVQY MARRLELPLYSVACHDDLGAADLLGRHLIGADGTWWQDGPLTRAVREGGICYLDEVVE ARQDTTVAIHPLADDRRELYLERTGETLQAPPSFMLVVSYNPGYQNLLKGLKPSTRQR FVALRFDYPAAQQEARILVGESGCAETLAQRLVQLGQALRRLEQHDLEEVASTRLLIF AARLIGDGMDPREACRVALAEPLSDDPATVAALMDIVDLHVA" misc_feature 580394..580798 /gene="nirQ" /locus_tag="PA0520" /note="AAA domain (dynein-related subfamily); Region: AAA_5; pfam07728" /db_xref="CDD:400191" misc_feature 580409..580432 /gene="nirQ" /locus_tag="PA0520" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature order(580412..580435,580607..580609) /gene="nirQ" /locus_tag="PA0520" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature 580595..580612 /gene="nirQ" /locus_tag="PA0520" /note="Walker B motif; other site" /db_xref="CDD:99707" misc_feature 580835..581089 /gene="nirQ" /locus_tag="PA0520" /note="CbbQ/NirQ/NorQ C-terminal; Region: CbbQ_C; pfam08406" /db_xref="CDD:429978" gene 581133..581660 /locus_tag="PA0521" /db_xref="GeneID:882206" CDS 581133..581660 /locus_tag="PA0521" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cytochrome C oxidase subunit" /protein_id="NP_249212.1" /db_xref="GeneID:882206" /translation="MWFFILAELSVFSLLLLAFAGAQAWQPELFRAGREQLDSRWGLL LTVALLSSGWLAALAVHAVRRGRPRQASGWLLAALLLALVYVGLKLHEYGRLADLGLD IEHDTFFTLYWCLTGFHFLHVLLGLLILGWLAQACWRRCYTPQACSGLESGVLYWHMV DLVWVLLFPLVYVLQ" misc_feature 581133..581654 /locus_tag="PA0521" /note="Heme-copper oxidase subunit III. Heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and mitochondria which couple the reduction of molecular oxygen to water to, proton pumping across the membrane. The...; Region: Heme_Cu_Oxidase_III_like; cl00211" /db_xref="CDD:444752" gene 581668..581925 /locus_tag="PA0522" /db_xref="GeneID:882203" CDS 581668..581925 /locus_tag="PA0522" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249213.1" /db_xref="GeneID:882203" /translation="MRTLTLCWLALLALAVTGVLLGGAGDSPWLLAAVLACAVAKGWL IGERFMELAHAPALWRRLLLAWPLLMALAVGAALYLARMNN" protein_bind 581944..581957 /experiment="Beta-gal reporter assay [PMID: 19477902]" /experiment="Site directed mutagenesis [PMID: 19477902]" /experiment="Western blot (quantitative) expression analysis [PMID: 19477902]" /note="'Transcription factor binding site for NP_249218.; Evidence of regulation for: PA0524, PA0523'" /bound_moiety="DNR" gene 582015..582455 /gene="norC" /locus_tag="PA0523" /db_xref="GeneID:882200" CDS 582015..582455 /gene="norC" /locus_tag="PA0523" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="nitric oxide reductase subunit C" /protein_id="NP_249214.1" /db_xref="GeneID:882200" /translation="MSETFTKGMARNIYFGGSVFFILLFLALTYHTEKTLPERTNEAA MSAAVVRGKLVWEQNNCVGCHTLLGEGAYFAPELGNVVGRRGGEEGFNTFLQAWMNIQ PLNVPGRRAMPQFHLSEGQVDDLAEFLKWSSKIDTNQWPPNKEG" misc_feature 582162..582413 /gene="norC" /locus_tag="PA0523" /note="Cytochrome c; Region: Cytochrom_C; pfam00034" /db_xref="CDD:459641" gene 582455..583855 /gene="norB" /locus_tag="PA0524" /db_xref="GeneID:882193" CDS 582455..583855 /gene="norB" /locus_tag="PA0524" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="nitric oxide reductase subunit B" /protein_id="NP_249215.1" /db_xref="GeneID:882193" /translation="MMSPNGSLKFASQAVAKPYFVFALILFVGQILFGLIMGLQYVVG DFLFPAIPFNVARMVHTNLLIVWLLFGFMGAAYYLVPEESDCELYSPKLAWILFWVFA AAGVLTILGYLLVPYAGLARLTGNELWPTMGREFLEQPTISKAGIVIVALGFLFNVGM TVLRGRKTAISMVLMTGLIGLALLFLFSFYNPENLTRDKFYWWWVVHLWVEGVWELIM GAILAFVLVKITGVDREVIEKWLYVIIAMALISGIIGTGHHYFWIGVPGYWLWLGSVF SALEPLPFFAMVLFAFNTINRRRRRDYPNRAVALWAMGTTVMAFLGAGVWGFMHTLAP VNYYTHGTQLTAAHGHMAFYGAYAMIVMTIISYAMPRLRGIGEAMDNRSQVLEMWGFW LMTVAMVFITLFLSAAGVLQVWLQRMPADGAAMTFMATQDQLAIFYWLREGAGVVFLI GLVAYLLSFRRGKAAA" misc_feature <582458..583840 /gene="norB" /locus_tag="PA0524" /note="Nitric oxide reductase large subunit [Inorganic ion transport and metabolism]; Region: NorB; COG3256" /db_xref="CDD:442487" gene 583857..585695 /locus_tag="PA0525" /db_xref="GeneID:882190" CDS 583857..585695 /locus_tag="PA0525" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="denitrification protein NorD" /protein_id="NP_249216.1" /db_xref="GeneID:882190" /translation="MAFAVELEEWVGAHWHRFITRHASGEFEAARVTLESMRRPLGML FRALGGAPGVALEATPARRLLLRRTWLQRVAGTCEQAPVSWFNGDSLRLPESLAVYPQ AELNRELYRWLALLAASAGPLRHWAQDNQRWARQLLDAYPALRPRYARLVAAHLRQRP SLDDCPAADAELEIALRRALAEPGSVERFPRVERAPWPVPLWLYPGERWTPSASAEDG EEAAAGAGKRQVARSGARKRAERIEERNSERNLLLFRLESLLSWSEHLALDRCSDDED DPDGARVAEDLDYLSLSRQRTQKGGGLRLDLDLPAADYDDLPLGPGLKLPEWDYRQQR LLSDHVLLQPMRPRGATSASLPAHLEKTALHLRRQFACLRDGRQRLRQQPQGDEIDLD AWLDFQVERRRGGSTQPGLFLEQRPRRRDLACLLLADLSMSTEAYLDDQRRVIDSIVD SLLLFGEALQALGDPFALYGFSSVRRQQVRWQVLKDFDEGYGGEVRGRVLALSPGYYT RMGAAIRRASQVLGGQPQKRRLLLLLSDGKPNDLDRYEGRYGIEDTRQAVIEARSQGL VPFCITIDKEAADYLPYLFGADGFALVERAGQLPERLLQLYRRLRR" misc_feature 584388..585659 /locus_tag="PA0525" /note="Nitric oxide reductase activation protein [Inorganic ion transport and metabolism]; Region: NorD; COG4548" /db_xref="CDD:443612" gene complement(585702..585896) /locus_tag="PA0526" /db_xref="GeneID:882186" CDS complement(585702..585896) /locus_tag="PA0526" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249217.1" /db_xref="GeneID:882186" /translation="MRQCLYCLHETEGAESACEQCGMPLPSASQHQLQGRRQRRFAWF CVGLALFCLGMMLWLPRDAP" gene complement(585980..586663) /gene="dnr" /locus_tag="PA0527" /db_xref="GeneID:882180" CDS complement(585980..586663) /gene="dnr" /locus_tag="PA0527" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator Dnr" /protein_id="NP_249218.1" /db_xref="GeneID:882180" /translation="MEFQRVHQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVF RQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQA VVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRY LLTLAAHAPGENCRVEIPVAKQLVAGHLSIQPETFSRIMHRLGDEGIIHLDGREISIL DRERLECFE" misc_feature complement(585992..586615) /gene="dnr" /locus_tag="PA0527" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" gene 586867..586990 /gene="rsmY" /locus_tag="PA0527.1" /db_xref="GeneID:4179186" ncRNA 586867..586990 /ncRNA_class="other" /gene="rsmY" /locus_tag="PA0527.1" /product="regulatory RNA RsmY" /db_xref="GeneID:4179186" gene complement(587017..587895) /locus_tag="PA0528" /db_xref="GeneID:882178" CDS complement(587017..587895) /locus_tag="PA0528" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249219.1" /db_xref="GeneID:882178" /translation="MDFRQLRYFVALYEEGHVGRAAERLALSQPALSQQIRQLEQNLD VSLFQRSGKRLLPTVAAHTLYNHAVPLLEGLERAREAMRVFRGQTPRSLAIGVLQTVN ASLVPYMVERLHAAQPHLRVQIYELSGIDIERRLLTGNLDIGIGFLPPRQPGLHSVEL YEDELQLVIPEEHPLKEFRKVSLAQAAELPMLLLGEEFRARQIWQEQLAAIGRRPRVQ AELNHMSGILDSLPQTRFATVLPGKARQMHSNQRLLWKPLSEPRIPLKVGLVYRDAQR QHASVELLRSLLEGVV" misc_feature complement(587032..587895) /locus_tag="PA0528" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 587997..588698 /locus_tag="PA0529" /db_xref="GeneID:882289" CDS 587997..588698 /locus_tag="PA0529" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249220.1" /db_xref="GeneID:882289" /translation="MEQIVVNGVFIGKVEETWGGLVSAIDKLPVEQEFWLGHDGLPGD EQADIRHHGGLERALHHYPAEHYRYWRKRHPLNRWQLPAFGENISTYGITEAEVCIGD QFHWGDALLEVSQPRSPCYRQGQRWNLPELPDELQSGGRCGWFYRVLRSGMVTPGDEL KLVQRHYPELTVARLLQWYFGDPLEPLGLRQMMACDALSQRWRKTAAKRLSSGVVEDW GPRLRGPSDYREHAS" misc_feature 588021..588668 /locus_tag="PA0529" /note="6-N-hydroxylaminopurine resistance protein; Provisional; Region: PRK11536" /db_xref="CDD:183182" gene 588924..590105 /locus_tag="PA0530" /db_xref="GeneID:882286" CDS 588924..590105 /locus_tag="PA0530" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="class III pyridoxal phosphate-dependent aminotransferase" /protein_id="NP_249221.1" /db_xref="GeneID:882286" /translation="MADALDSLRLMRTQERPAQVFVRGQGSWLWDSDGRAFLDFTQGL AVNCLGHSPSVLVQALARQARELVSAGPGLLNRPVLALAQRLCLATGSDQAYFLTSGA EANEAAIALARKWGRLHRGGAQRIVSTVNSIHGRTPGTLTACGKPAQHGLEGFARVPF NDLDAMAAAIDEETVAVMLEPVQGDAGVIPATLDYLRGIERLCRQRGVLLILDEVQTG IGRCGALLAEELYGVRADIVTLGKGLGAGVPLSALLARGNACCFEPGDQLGTHHGNAL MTAAGLAVLNTVLEPGFLEQVREQGTHLRDGLARVARRYGHGPLRGQGLFWGLPLIGQ RAPAVVRAAFGEGLLINAPQPHCLRFSPALTVSRANVDEMLRRLERALARVANRHEEV A" misc_feature 588933..590081 /locus_tag="PA0530" /note="Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase [Amino acid transport and metabolism]; Region: ArgD; COG4992" /db_xref="CDD:444016" gene 590105..590821 /locus_tag="PA0531" /db_xref="GeneID:878497" CDS 590105..590821 /locus_tag="PA0531" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutamine amidotransferase" /protein_id="NP_249222.1" /db_xref="GeneID:878497" /translation="MRALVLQHVPFEGSARIGDWIGRHCEHEHVCYLYADAHLPALDS FDLLVVMGGPMSVHDEAQYPWLVAEKRLIRAALDAGKKVLGICLGAQLLAQALGAAVR PGRQAEIGWWPLHRYSQALGSPLGERLPERLMAFHWHGETFDLPAGSVPLYGSAACAN QGFIWNEQAIGLQCHLESTAESIEALLDACPQDLQREGAVQSAGRIRQGVAHCREVAP VLFLLLDYLAHRPAEIARRA" misc_feature 590108..590635 /locus_tag="PA0531" /note="Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; Region: GATase1_1; cd01741" /db_xref="CDD:153212" misc_feature order(590363..590365,590627..590629,590633..590635) /locus_tag="PA0531" /note="catalytic triad [active]" /db_xref="CDD:153212" gene complement(590896..591402) /locus_tag="PA0532" /db_xref="GeneID:878235" CDS complement(590896..591402) /locus_tag="PA0532" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249223.1" /db_xref="GeneID:878235" /translation="MPARPDRARVTIALAVLVHLHRETIAEAPLPWRYRKQCPGGKPR RRAGREATPPLGPEVVDASTRLALHEKKAPSPCMSDAMSKNKHPDLGEIQRSLNQALE GYDCQCRMHYDGTVSINVAAREHDETFTFVGIQPGELDNPTRLHLFAESLRRDLALLE PWLGKHAA" gene 591445..592935 /locus_tag="PA0533" /db_xref="GeneID:881997" CDS 591445..592935 /locus_tag="PA0533" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249224.1" /db_xref="GeneID:881997" /translation="MNDQVLRTQTDRRQLQQIIAGLTEGVILIEPDQRILWANEAALA MHGVDSLEGLGADTGEYRERFRLRYRNNHPLQEGQYPAERLVAGECFSDVVVEVFPAA DEDTRWVHRVRGLVLTTPEDKPDCLVLILHDATEWASAEQRFEKTFNANPAPAVICRL SDYRYVKVNVGFLEMTGYARDQVIGRSVYELDVLDQAERRELAVERLGAGETIPQMEA SLRVAEGGRKCVVVAGQPIEVGEEACMLFTFTDLEPRKKAEEALRKSEERFAKAFRMA PVPSLVLYGDDLQALDINQAFSETFGYQAEELLGESTVACGLWQDGGAERLGELLAQS GSVRNVQLRLQHKDRNGLDCLVSAEAVSLNEQDCVLVALLDISDRRRTEMELVHAIET VMQDASWFSRTLIEKLANVRRANAPGTGAELADLTAREREVFDLICQGLADKEIAKEL GLAPNTVRNHVATIYAKLDVHSRGEAIVWARERGFAPEPRNGNGRK" misc_feature 591445..>591648 /locus_tag="PA0533" /note="Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms]; Region: NtrY; COG5000" /db_xref="CDD:444024" misc_feature 591478..>591852 /locus_tag="PA0533" /note="Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms]; Region: NtrB; COG3852" /db_xref="CDD:443061" misc_feature 591850..592602 /locus_tag="PA0533" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature <592720..592905 /locus_tag="PA0533" /note="DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains [Signal transduction mechanisms, Transcription]; Region: CitB; COG2197" /db_xref="CDD:441799" gene 593273..594562 /locus_tag="PA0534" /db_xref="GeneID:878392" CDS 593273..594562 /locus_tag="PA0534" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249225.1" /db_xref="GeneID:878392" /translation="MFLQSNEHVGTYYAAVNPELIQPRQALEGDLDCEVLVVGAGFSG LHTALRLVEGGRQVCVIEASRIAWAASGRNGGQALPGWSSDLPPLEADLGYEGARRLW DGMLWAAGEMRELPQRHGFDCDYRVGHLWTAILPRRVGLLYDWQAEANRRWGYEGLRF VAKDELPEWIASERYLAGLYDPHAAHLNPLKLAFGLAAAIERAGGRIHERTRALNYRE EGDGYRVRTEHGEIRCAALVLACNAYIDGLDSELSQRMLPVGTYQVATEPLGEERAKS LLPRNCCVTDNQFVLDYFRLTPDHRLLFGGGCTYLGGMPSDIRAATRPYLERVFPQLR GVALEYAWGGHIDCSMRRTPDIGRQGNRYWLQGYSGHGVLPSLAAARAVSDALLGDDE TLALYQRLRNPKFPGGQRFAAPLEALGKAYYRLRDLF" misc_feature 593366..594460 /locus_tag="PA0534" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" gene 594580..595134 /locus_tag="PA0535" /db_xref="GeneID:878471" CDS 594580..595134 /locus_tag="PA0535" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249226.1" /db_xref="GeneID:878471" /translation="MSEVADDLAEIASLVRELRKRKGITLQALADGIRRSVGFVSQVE RGLSRPAVDDLVAISQVLGVPATYFFCSPKIQASPWVTRPGERRTLAYARGASDNLVS PRLGGAFFMLETCLEAGADSGERDLLDSSEQGGYVLEGELTLWLEDEELRLQAGDGFQ IPSHMRSRYANRSQAPVRVLWVYA" misc_feature 594592..>594789 /locus_tag="PA0535" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" misc_feature 594862..595125 /locus_tag="PA0535" /note="XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain; Region: cupin_XRE_C; cd02209" /db_xref="CDD:380339" misc_feature order(594871..594873,594913..594915,594919..594921, 594961..594963,594976..594978,595078..595080, 595084..595086,595120..595122) /locus_tag="PA0535" /note="putative active site [active]" /db_xref="CDD:380339" gene complement(595245..596270) /locus_tag="PA0536" /db_xref="GeneID:882098" CDS complement(595245..596270) /locus_tag="PA0536" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249227.1" /db_xref="GeneID:882098" /translation="MRRLLLGAGLLLASLVAWADVPPIPALTARVTDLTATLSGDQRQ HLEQQLAALEAKSGAQLAVLLVPTTGDDSIEEYAVRTFEKWKLGQKKVDDGVLLLVAK NDRTLRIEVGYGLEGAITDVQAGRIISEQITPQFRQGNFYGGIQAGVDSLVQLIDAEK NPDSATASAPVDALPAVPEATPPRALPAPVDEGEVYDSAPPEPKKKSGLSGQLWGNPV YLGVYVAVLLAVALLGRLLPLQWMRRRSIGRFLLCSAAVAGLAWLLSMGLWQNVDRAA DDSLGVLAPTLFIYALFLLPGEVLMAILSAILNSRGGGGGGGSGGGGIFRGGGGSSGG GGASGRW" misc_feature complement(<595764..596222) /locus_tag="PA0536" /note="Uncharacterized membrane protein YgcG, contains a TPM-fold domain [Function unknown]; Region: YgcG; COG1512" /db_xref="CDD:441121" gene complement(596274..596882) /locus_tag="PA0537" /db_xref="GeneID:878574" CDS complement(596274..596882) /locus_tag="PA0537" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249228.1" /db_xref="GeneID:878574" /translation="MPRFLRNALLPVLALLLSGCGYNAMQAGDEQVKAAWSEVLNQYQ RRADLVPNLVSTVKGYASHEASVLTQVTEARAKVGSVQLNADQLDDEQAVQRFQKAQG ELSSALSRLLVVTENYPQLKADGLFKDLLTQLEGTENRIAVARGRYVKSVQEYNVLLR QFPGVITAKLFGYKPKANFSVENEAAISTAPKVDFGNPQPAQ" misc_feature complement(596295..596828) /locus_tag="PA0537" /note="Magnetosome formation protein MamQ, lipoprotein antigen LemA family [Cell wall/membrane/envelope biogenesis]; Region: LemA; COG1704" /db_xref="CDD:441310" gene complement(596970..597479) /gene="dsbB" /locus_tag="PA0538" /db_xref="GeneID:878500" CDS complement(596970..597479) /gene="dsbB" /locus_tag="PA0538" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="disulfide bond formation protein" /protein_id="NP_249229.1" /db_xref="GeneID:878500" /translation="MSALLKPLDNRLFWPAVAIGGLLILAFVLYLQHVRGFAPCSLCI FIRLDVLGLVLAGIVGSLAPRSRIAGGIAALGMLAASLGGIYHAWSLVAEEKLAAQGM GSCKMFMGFPEWIPLDTWLPQVFQPEGLCGEVVWTLLGQSMAVWSLALFVFCLLVLAA KLAFGRRTA" misc_feature complement(597000..597449) /gene="dsbB" /locus_tag="PA0538" /note="Disulfide bond formation protein DsbB; Region: DsbB; pfam02600" /db_xref="CDD:460613" gene 597708..598538 /locus_tag="PA0539" /db_xref="GeneID:881942" CDS 597708..598538 /locus_tag="PA0539" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249230.1" /db_xref="GeneID:881942" /translation="MLATSLVLCAAVLHATWNTLVKFSSDRLLVVACMDVVGVLCAIL LLPFVSLPPAEVWPWLLGATVLQLLYRVLLIEAYKVGDLGLVYPLMRGLSPLVVLGLT LAFGGEQLSGRQILGILLIPFGMLCLLWGGGGSRLPWRTLPVVLLIGLCIGGYTWSDG NALKRWPLALDYLVWLTLLSGLPFPLIAVGARTRAFARFWALEWKLGLAVGVCVLASY GLVLWAMQLGSIAEAAALRETSVLLAVLFGMRFLNEPFGLPRLLACGLVLAGMLLMKL " misc_feature 597708..598526 /locus_tag="PA0539" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene 598608..598994 /locus_tag="PA0540" /db_xref="GeneID:879356" CDS 598608..598994 /locus_tag="PA0540" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249231.1" /db_xref="GeneID:879356" /translation="MTIAFWCVLIAIFLPYVCTSIAKFGGEGYGGRANADPRAFLGSL EGFRRRANNAQLNAFEVTPAFAAAVIIAHLVGNASQATLDSLAIAWITSRLLYVICYL ADWGPLRSLVWFVGMLLIAAFFVVSA" misc_feature 598608..598991 /locus_tag="PA0540" /note="Uncharacterized conserved protein, MAPEG superfamily [Function unknown]; Region: COG3686" /db_xref="CDD:442902" gene 599107..599565 /locus_tag="PA0541" /db_xref="GeneID:879377" CDS 599107..599565 /locus_tag="PA0541" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249232.1" /db_xref="GeneID:879377" /translation="MKLKSLLVVLLAGVALSGCHRMDPNSPEAKRQAIFKEMLRTSED MGGMLRGRLPFDAEKFRAGSAKLHQLADQPWQYFPSPKAGEEGEDTRAKDEVWQRQQE FKAATQVFIDAMNRLQDNTRQATPTPDGVRKDFAAVEDACEACHKKFRAL" misc_feature 599140..599559 /locus_tag="PA0541" /note="Cytochrome c556 [Energy production and conversion]; Region: CytC556; COG3909" /db_xref="CDD:443115" gene complement(599757..600176) /locus_tag="PA0542" /db_xref="GeneID:879311" CDS complement(599757..600176) /locus_tag="PA0542" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249233.1" /db_xref="GeneID:879311" /translation="MSIRPSLPLAGLLLAVALPLSAAQPGAAKGAPLSGCAAKQAAIE AKLETARSFANEGQVAGLEKALSEVKEHCTEAGLLRENKQKVIDSEREVSEREKDLRK AMGKGDPEKIEKRKAKLAEARAELEEAKKGLEQAQAQ" misc_feature complement(599823..600107) /locus_tag="PA0542" /note="Protein of unknown function (DUF1090); Region: DUF1090; pfam06476" /db_xref="CDD:428965" gene 600426..601394 /locus_tag="PA0543" /db_xref="GeneID:882164" CDS 600426..601394 /locus_tag="PA0543" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249234.1" /db_xref="GeneID:882164" /translation="MRTLIRLVRTLILLLVLALLAGAWWWLQDEALRPPALAGHSEDS SLKVAGLRRHYLLYVPPGVSEGAPLLVVLHGSRGDGAQMRRISGYGFDRLAAQEGFLV AYPDGFEGHWNDCRKAASYSARLRDVDDVAFLRALVARLAQEYRVDSQRVYVAGYSNG GQMAFRLAAEAPGLPAAIAAVAASLPTTGNDACRPVERPTAALLINGTRDPINPYLGG KVSLFGFGDRGAVRSTLDSARWWAGLNGIAAPPDVAPLTRPGPVWTERQRWQEDGHPP VELLSVHGGGHVLAQPDYRFPRILGKSDPELDAPVEIWRFFSQLPR" misc_feature 600516..601382 /locus_tag="PA0543" /note="Acetyl xylan esterase AxeA and related esterases, LpqC family [Carbohydrate transport and metabolism]; Region: LpqC; COG3509" /db_xref="CDD:442732" gene complement(601398..602141) /locus_tag="PA0544" /db_xref="GeneID:881947" CDS complement(601398..602141) /locus_tag="PA0544" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249235.1" /db_xref="GeneID:881947" /translation="MKIRLLSDLHHEHFDGRRQLPEVEADVVVLAGDIHSHLEGLHWA RETFADSEIVYVAGNHEFYSSEMTDLTQAMRNIARALEIHFLENDEARIGPARFLGAT LWTDFQLYGADGYAPAHELALQSMPDFSCIDWFGGDFTPEQSIALHQASRDWLAEQLA RPHDGPTLVVSHHAPSALSIPPQFVGNPLSPAFASNLDELVAQADYWLHGHVHDALDY RIGRARVLANPGGYPHERGGFRPEFVFEV" misc_feature complement(601446..602135) /locus_tag="PA0544" /note="metallophosphatase superfamily, metallophosphatase domain; Region: MPP_superfamily; cl13995" /db_xref="CDD:472684" misc_feature complement(order(601509..601511,601626..601628, 601962..601967,602043..602045,602112..602114, 602118..602120)) /locus_tag="PA0544" /note="active site" /db_xref="CDD:277317" misc_feature complement(order(601509..601511,601626..601628, 601965..601967,602043..602045,602112..602114, 602118..602120)) /locus_tag="PA0544" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:277317" gene 602346..603650 /locus_tag="PA0545" /db_xref="GeneID:878494" CDS 602346..603650 /locus_tag="PA0545" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249236.1" /db_xref="GeneID:878494" /translation="MKLLWGVLAAALAAWGLTLAVDPPASLDIWVVRKQAILLTGVAS FALMSLIMLLAVRPVWLEKPLDGLDRMYRLHKWAGILAIVLGLLHYLLELAGPWLAGI VGKPVKGPRVETFLDVFRGSAKELGEWSAWILGGMLLVTLWQRFPYHLWRYVHKALAL VYLVLAFHSVVLAPASYWSQPAGWLVAACALLGSACALLSLSGRIGRTRRHAGVVTAV ERHGESLLEVTCRLQGDWSHRAGQFAFLTCDRLEGAHPFTIASADRGCGEVRFSIKAL GDYTRRLQDNLEVGARVEVEGPYGCFDFRRGLAGRQVWVAAGIGVTPFIAWLESLQAA PESAPSVELHYCVRNSQEALFAGRLRELCEHLPSVTLHIRYSDEQGKPQAAQLGVLKS AEGRWPSVWFCGPQGLADSLRRDLRRQGMPLRLFHQEAFRMR" misc_feature 602412..603647 /locus_tag="PA0545" /note="Predicted ferric reductase [Inorganic ion transport and metabolism]; Region: COG4097" /db_xref="CDD:443273" gene complement(603706..604896) /gene="metK" /locus_tag="PA0546" /db_xref="GeneID:878379" CDS complement(603706..604896) /gene="metK" /locus_tag="PA0546" /EC_number="2.5.1.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine synthetase" /protein_id="NP_249237.1" /db_xref="GeneID:878379" /translation="MSEYSVFTSESVSEGHPDKIADQISDAVLDAIIAKDKYARVACE TLVKTGVAIIAGEVTTSAWVDLEELVRKVIIDIGYDSSDVGFDGATCGVLNIIGKQSV DINQGVDRAKPEDQGAGDQGLMFGYASNETDVLMPAPICFSHRLVERQAEARKSGLLP WLRPDAKSQVTCRYEGGKVVGIDAVVLSTQHNPEVSYNDLRDGVMELIIKQVLPAELL HKDTQFHINPTGNFVIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSA AYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREH FDLRPYAITKMLDLLHPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEKTDKAALLRD AAGL" misc_feature complement(603712..604881) /gene="metK" /locus_tag="PA0546" /note="S-adenosylmethionine synthetase [Coenzyme transport and metabolism]; Region: MetK; COG0192" /db_xref="CDD:439962" gene complement(604912..605913) /locus_tag="PA0547" /db_xref="GeneID:879420" CDS complement(604912..605913) /locus_tag="PA0547" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249238.1" /db_xref="GeneID:879420" /translation="MSLRVPSIRPDDYDPLAALCKAAGDSLRLNVLRALANDSFGVLE LAQIFAIGQSGMSHHLKVLAQAGLVATRREGNAIFYRRSLPLAERTGGALHAALLEEV DERALPDDVRARIDAVHAQRAAVSQDFFARAADKFQAQQDLIAGLPQYRESVLALLDA LAFAPGATALEVGPGDGGFLPELARRFRQVTALDNSAAMLELARQRCKEEGLGNVRLE LADALQDAAEPADCVVLNMVLHHFAAPAEALKQLARLVHPGGSLLVTDLCRHNQGWAR EACGDLWLGFEQEDLAQWADAAGLTPGESLYIGLRNGFQIQVRHFARDASESRLTHR" misc_feature complement(605671..605868) /locus_tag="PA0547" /note="metalloregulator ArsR/SmtB family transcription factor; Region: HTH_metalloreg; NF033788" /db_xref="CDD:411368" misc_feature complement(order(605674..605682,605695..605703, 605719..605724,605728..605733,605740..605745, 605749..605760,605785..605793,605830..605838, 605848..605853)) /locus_tag="PA0547" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238042" misc_feature complement(605053..605526) /locus_tag="PA0547" /note="Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Region: UbiE; COG2226" /db_xref="CDD:441828" gene 606160..608157 /gene="tktA" /locus_tag="PA0548" /db_xref="GeneID:878523" CDS 606160..608157 /gene="tktA" /locus_tag="PA0548" /EC_number="2.2.1.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transketolase" /protein_id="NP_249239.1" /db_xref="GeneID:878523" /translation="MPSRRERANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWRDY MQHNPSNPQWANRDRFVLSNGHGSMLIYSLLHLTGYDLGIEDLKNFRQLNSRTPGHPE YGYTAGVETTTGPLGQGIANAVGMALAEKVLAAQFNRDGHAVVDHYTYAFLGDGCMME GISHEVASLAGTLRLNKLIAFYDDNGISIDGEVHGWFTDDTPKRFEAYGWQVIRNVDG HDADEIKTAIDTARKSDQPTLICCKTVIGFGSPNKQGKEECHGAPLGADEIAATRAAL GWEHAPFEIPAQIYAEWDAKETGAAQEAEWNKRFAAYQAAHPELAAELLRRLKGELPA DFAEKAAAYVADVANKGETIASRKASQNALNAFGPLLPELLGGSADLAGSNLTLWKGC KGVSADDAAGNYVFYGVREFGMSAIMNGVALHGGFIPYGATFLIFMEYARNAVRMSAL MKQRVLYVFTHDSIGLGEDGPTHQPIEQLASLRLTPNLDTWRPADAVESAVAWKHAIE RADGPSALIFSRQNLPHQARDVAQVADIARGGYVLKDCEGEPELILIATGSEVGLAVQ AYDKLSEQGRKVRVVSMPCTSVYEQQDESYKQSVLPVEVGARIAIEAAHADYWYKYVG LDGRIIGMTSFGESAPAPALFEHFGFTLDNVLAVAEELLED" misc_feature 606160..608148 /gene="tktA" /locus_tag="PA0548" /note="Transketolase [Carbohydrate transport and metabolism]; Region: TktA; COG0021" /db_xref="CDD:439792" gene 608157..609221 /locus_tag="PA0549" /db_xref="GeneID:881950" CDS 608157..609221 /locus_tag="PA0549" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249240.1" /db_xref="GeneID:881950" /translation="MHTLYWRDLESPANGEWLGLAVQVEGAHRAPSFLHLQSGGQARI RLMRGDQPLLWATQLPYHDGIWLVKSLVAASPAQASVPPIDSPTLEALRGLRGEARYK AWSRYFVETLRTSPGSCLEAGRWLLRLSLAEQVPAWQPPQSHDPRERVLERWRYRSVG RDALLPDWRFYSLEKVLDDDWVQWLDWWGRDNDALIALRRVEDDEGRVKWWRKKAREG ELPPVLALRLNCLDACVILDGHCRLRAGLLENVAPEILVLCAYDEQPMPVDTAQRERV LQSLAQRVDAPVRRGRRPLDSEQLNQVLLRLFDDRPWPRVLTRARAVLKEEQWCAEVR DWLAARERLDALEPIIRRVE" gene complement(609202..609999) /locus_tag="PA0550" /db_xref="GeneID:879239" CDS complement(609202..609999) /locus_tag="PA0550" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249241.1" /db_xref="GeneID:879239" /translation="MPRFAANLSMLYPRHDFLERFAAAAADGFEGVEYLFPYAYPAAE LKARLDDHGLRQVLFNAAPGDWDKGERGLASLPGREAEFRRAIAQAIDYAQVLGNRHI HVMAGLLPAGADRIRHRETYLDNLAHAAREAAGAGLTVLIEPINNRDMPGFFLTRQDD AQAICREVGADNLQVQFDCYHCQIVEGDLATTLRRDIGNIGHVQIAGVPDRHEPDDDN EVNYPYLFELLDRLGYQGWIGCEYRPRGDTSAGLEWLRRWRATRRDG" misc_feature complement(609220..609999) /locus_tag="PA0550" /note="Hydroxypyruvate/dehydroerythronate isomerase, Hyi/OtnI family [Carbohydrate transport and metabolism]; Region: Hyi; COG3622" /db_xref="CDD:442840" gene 610214..611275 /gene="epd" /locus_tag="PA0551" /db_xref="GeneID:879410" CDS 610214..611275 /gene="epd" /locus_tag="PA0551" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="D-erythrose 4-phosphate dehydrogenase" /protein_id="NP_249242.1" /db_xref="GeneID:879410" /translation="MSTPPFRVALNGYGRIGRCVLRALHERPEQLGFEIVALNDLADQ ASVEYLTRFDSTHGRFPGEVKVDGDCLHINGDCVKVLRSPTPEAIDWQALRVDLVLEC SGQYTNRAQAERFLRAGAPRVLFSQPMASEADIDATIVYGVNQQDLSGRETLVSNASC TTNCGVPLLKLLNEAIGLEYVSITTIHSAMNDQPVIDAYHHEDLRRTRSAFQSVIPVS TGLARGIERLLPELAGRIQAKAIRVPTVNVSALDITLQTSRDTSAAEINRVLREAAES GPLRGLLAYTELPHASCDFNHDPHSAIVDGSQTRVSGPRLVNLLAWFDNEWGFANRML DVAGHYLRAAVPDQQVPKD" misc_feature 610232..611218 /gene="epd" /locus_tag="PA0551" /note="erythrose-4-phosphate dehydrogenase; Region: E4PD_g-proteo; TIGR01532" /db_xref="CDD:130595" gene 611281..612444 /gene="pgk" /locus_tag="PA0552" /db_xref="GeneID:879198" CDS 611281..612444 /gene="pgk" /locus_tag="PA0552" /EC_number="2.7.2.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphoglycerate kinase" /protein_id="NP_249243.1" /db_xref="GeneID:879198" /translation="MTVLKMTDLDLKGKRVLIREDLNVPVKDGQVQSDARIKAALPTL KLALEKGAAVMVCSHLGRPTEGEFSAENSLKPVAEYLSKALGREVPLLADYLDGVEVK AGDLVLFENVRFNKGEKKNADELAQKYAALCDVFVMDAFGTAHRAEGSTHGVARFAKV AAAGPLLAAELDALGKALGNPARPMAAIVAGSKVSTKLDVLNSLAGICDQLIVGGGIA NTFLAAAGHKVGKSLYEADLVETAKAIAAKVKVPLPVDVVVAKEFAESAVATVKAIAE VADDDMILDIGPQTAAQFAELLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIADSAA FSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILEQRAKG" misc_feature 611287..612429 /gene="pgk" /locus_tag="PA0552" /note="phosphoglycerate kinase; Provisional; Region: pgk; PRK00073" /db_xref="CDD:234613" misc_feature order(611341..611343,611347..611349,611386..611388, 611455..611457,611617..611619) /gene="pgk" /locus_tag="PA0552" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238195" misc_feature order(611812..611823,612355..612363) /gene="pgk" /locus_tag="PA0552" /note="hinge regions; other site" /db_xref="CDD:238195" misc_feature order(611926..611928,612127..612129,612199..612201, 612205..612207,612211..612222,612301..612309) /gene="pgk" /locus_tag="PA0552" /note="ADP binding site [chemical binding]; other site" /db_xref="CDD:238195" misc_feature 612304..612306 /gene="pgk" /locus_tag="PA0552" /note="catalytic site [active]" /db_xref="CDD:238195" gene 612517..612717 /locus_tag="PA0553" /db_xref="GeneID:879424" CDS 612517..612717 /locus_tag="PA0553" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249244.1" /db_xref="GeneID:879424" /translation="MRSVTLPLLMFCLGLAACSGDGGRRPSTCEVISPPDVMVPTEQN RQRVEQQSSGDPTAGQKPVECP" gene 612877..613218 /locus_tag="PA0554" /db_xref="GeneID:882092" CDS 612877..613218 /locus_tag="PA0554" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249245.1" /db_xref="GeneID:882092" /translation="MNYSRIALFGGFAAAALLAGCSASSGKPGGKDWTRWTCDSKAVI EWRYIDGSKNIVDLRLKDEDDVVHHLEQEPAAVGAFYSDGRLGFHLENDEGLVYWVET DDLIGRGCKAR" misc_feature 612982..613194 /locus_tag="PA0554" /note="Membrane-bound lysozyme-inhibitor of c-type lysozyme; Region: MliC; pfam09864" /db_xref="CDD:462921" gene 613338..614402 /gene="fda" /locus_tag="PA0555" /db_xref="GeneID:880792" CDS 613338..614402 /gene="fda" /locus_tag="PA0555" /EC_number="4.1.2.13" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="fructose-1,6-bisphosphate aldolase" /protein_id="NP_249246.1" /db_xref="GeneID:880792" /translation="MALISMRQMLDHAAEFGYGVPAFNVNNLEQMRAIMEAADKTDSP VIVQASAGARKYAGAPFLRHLILAAIEEFPHIPVVMHQDHGTSPDVCQRSIQLGFSSV MMDGSLREDGKTPADYDYNVRVTQQTVAFAHACGVSVEGELGCLGSLETGMAGEEDGV GAEGVLDHSQLLTDPEEAADFVKKTKVDALAIAIGTSHGAYKFTKPPTGDTLSIQRIK EIHARIPDTHLVMHGSSSVPQDWLAIINEYGGEIKETYGVPVEEIVEGIKYGVRKVNI DTDLRLASTGAIRRFLAQNPSEFDPRKYFSKTVEAMRDICIARYEAFGTAGNASKIKP ISLEGMFQRYARGELDPKVN" misc_feature 613338..614378 /gene="fda" /locus_tag="PA0555" /note="fructose-bisphosphate aldolase class II; Region: PRK09196" /db_xref="CDD:181691" misc_feature order(613416..613424,613431..613433,613491..613493, 613500..613508,613518..613520,613530..613532, 613539..613544,613806..613808,614169..614174, 614178..614183,614190..614192,614202..614204, 614211..614213) /gene="fda" /locus_tag="PA0555" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:238477" misc_feature order(613584..613589,613926..613934,613938..613940, 614031..614036,614040..614042,614160..614162, 614166..614171) /gene="fda" /locus_tag="PA0555" /note="active site" /db_xref="CDD:238477" misc_feature order(613587..613589,613929..613931,614031..614033) /gene="fda" /locus_tag="PA0555" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:238477" misc_feature order(613926..613928,613932..613934,613938..613940, 614034..614036,614040..614042) /gene="fda" /locus_tag="PA0555" /note="Na+ binding site [ion binding]; other site" /db_xref="CDD:238477" gene 614468..614950 /locus_tag="PA0556" /db_xref="GeneID:882999" CDS 614468..614950 /locus_tag="PA0556" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249247.1" /db_xref="GeneID:882999" /translation="MRRWLLTLPFLLLAGCAGLHAPSRDVEEAASPSVARDPADPQDC LARSDCTTKTSRTLLFVFDYAEAGGELVVRDGRQLETPPAPQRSTWPALRIQLAEPVN GRFEFESPCLRKSGKGCRYSQAMLLKVYRSYLVGKPCSLLSPRAVKRCVDPAATAARR " gene complement(614952..615608) /locus_tag="PA0557" /db_xref="GeneID:882017" CDS complement(614952..615608) /locus_tag="PA0557" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249248.1" /db_xref="GeneID:882017" /translation="MRDLLGGRESPRYSTAVFPRIPDERFKALRGVARSHWSGASWTS RGRGYCRSEGPPDDQGKSIPAHAGVPRHNQESAMSSEVSAIRQLIEDWRAAVRASDVP RIVSYYAEDIVAFDAILQLQFKGRDAYQKHWQACTEMCKGPMTFDIAELQIHADPQVA FAHYLCHCGGTGPDGQPHSSWMRVSAGYRKHGDGWKVIHEHFSAPFDMDGKALFDLQP " misc_feature complement(615000..615383) /locus_tag="PA0557" /note="Ketosteroid isomerase homolog YybH [General function prediction only]; Region: YybH; COG4319" /db_xref="CDD:443460" gene 615607..616374 /locus_tag="PA0558" /db_xref="GeneID:880893" CDS 615607..616374 /locus_tag="PA0558" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249249.1" /db_xref="GeneID:880893" /translation="MSSVHSAAQQGFSAEAQRYAQGRPEYPEALSDWLRDALGLRPQT VAVDLGAGTGKFTRLLARTGARVVAVEPVDAMRAQLAEALPQVQALAGSAQSIPLANG FADALVCAQAFHWFATVEALEEMRRVLTAEGRLGLVWNVRDESLDWVAEITRIITPYE GDAPRFYKGDWRRPFERAPFGPLRLSTFAYEHVGPPEQVIVSRFLSVSFIAALPETEK NAVAAQLRELVASHPALKGKEQVALPYRTEAYLAEAR" misc_feature 615640..616068 /locus_tag="PA0558" /note="Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Region: UbiE; COG2226" /db_xref="CDD:441828" gene complement(616371..617549) /locus_tag="PA0559" /db_xref="GeneID:879364" CDS complement(616371..617549) /locus_tag="PA0559" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249250.1" /db_xref="GeneID:879364" /translation="MASTDVLIVGAGAAGLMCAMTAAGRGRRVRVLDHANKAGKKILM SGGGRCNFTNLYTEPANFLSRNPHFCKSALARYTQWDFIGLVAKHQVPYHEKKLGQLF CDNKSSDILEMLLRECAEAGAEILLDTSIEEIARDDAGYRLRTSAGEMRCESLVIASG GLSIPTLGASGFGYQVARQFGHEVLPTRAGLVPFTITDQLKELCAELSGTSVDCRVSC NGQAFRENLLFTHRGLSGPAMLQISSYWQPGDTLEIDLLPDHDASEWLAQQQRERPNS ELKTLLAELFTKKLAGLLADRWFVSKPMKQYTPTELAGIAGQLSAWRVTPSGTEGYRT AEVTLGGVSTDEVSSKTMESQRSPGLYFVGEVLDVSGHLGGFNFQWAWASGYAAGQYA " misc_feature complement(616377..617540) /locus_tag="PA0559" /note="HI0933-like protein; Region: HI0933_like; pfam03486" /db_xref="CDD:427330" protein_bind complement(616760..616772) /locus_tag="PA0559" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 617662..618150 /locus_tag="PA0560" /db_xref="GeneID:879234" CDS 617662..618150 /locus_tag="PA0560" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249251.1" /db_xref="GeneID:879234" /translation="MIPLKYLQAYPASLQDQVRQLIAENRLGEYLERRYPGRHDVQSD KALYAYTMNLKQEHLRNAPGLDKVLYDNKLDVVQRALGLHTAISRVQGGKLKAKKEIR VASLFKDAAPEFLRMIVVHELAHLKESEHNKAFYQLCQYMLPDYHQLEFDLRVYLTWK SL" misc_feature <617989..618111 /locus_tag="PA0560" /note="Peptidase M48 YhfN-like, a novel minigluzincin; Region: M48_yhfN_like; cd07344" /db_xref="CDD:320703" misc_feature order(618022..618027,618034..618036,618052..618054) /locus_tag="PA0560" /note="active site" /db_xref="CDD:320703" misc_feature order(618022..618024,618034..618036,618052..618054) /locus_tag="PA0560" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:320703" gene 618176..619330 /locus_tag="PA0561" /db_xref="GeneID:882132" CDS 618176..619330 /locus_tag="PA0561" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249252.1" /db_xref="GeneID:882132" /translation="MGSASQRSVQDLYEDVGDHYRIFIRAPFFQLLKHRDYWVPLLYF FFVLITMFWDLYCHSGQYLYEARSLLPFYLFPFLIAALRIGDIVVDTRCRNVENLGGF ERSAESSRYVQLSLYERQWFRLRYRAYGGNLRCLAGDLVENWRLWKEVNSKAAKDIDG AVMLRFFLPPRDLARLVTLLAALIAVIATLIITLGADRQGYFEFVDNLPAYLKLYWGV VFIIAFSGPYMIFLGMQARLVLRAMIDALSISQPSDKLFYQFIQRLIWADGVKPANPS ANSRVLRAVDSMVDFFYEEWRSAIGKLVLWLVALLALLLCTLLHCLLRVFCSARTLGE ALMRILLAVLGSVCRIVAAIQRLNLAVPFHWTFFVLTGTGALFATLCGQP" gene complement(619332..620006) /locus_tag="PA0562" /db_xref="GeneID:878411" CDS complement(619332..620006) /locus_tag="PA0562" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_249253.1" /db_xref="GeneID:878411" /translation="MPHPIDALISDCDGVLVDSEVIAERVMYEALSAYAPLEELQRLL EGTFGLTSRDILDRVEKHFGLRIPDSFNREVRQRSEEMVAQVQPIPGAREALLALDLP VAVASNSRRHSLERSLARAGLSELIGERLASADMVALPKPAPDVYLHAASLLGVAPER CLVVEDSSTGTRAALAAGMRVIGFVGAGHIPAGHAEVLRELGAIAIVEHMRELPETVA RLRRTV" misc_feature complement(619449..619991) /locus_tag="PA0562" /note="subfamily of beta-phosphoglucomutase-like family, similar to Escherichia coli 6-phosphogluconate phosphatase YieH; Region: HAD_BPGM_like; cd07526" /db_xref="CDD:319828" misc_feature complement(order(619497..619502,619509..619514, 619584..619586,619683..619688,619962..619976)) /locus_tag="PA0562" /note="active site" /db_xref="CDD:319828" gene complement(620135..620488) /locus_tag="PA0563" /db_xref="GeneID:879219" CDS complement(620135..620488) /locus_tag="PA0563" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249254.1" /db_xref="GeneID:879219" /translation="MEWFLKCVKEHYFDFNGRARRKEYWMFTLVNIIISVALSVVLGL ISEKLLPIANLYSLAVLLPALGVTARRLHDINKSGWWMLIALIPIVGLYLIYLLAKDS DAGQNQYGQNPKGIA" misc_feature complement(620144..620485) /locus_tag="PA0563" /note="Uncharacterized membrane protein YhaH, DUF805 family [Function unknown]; Region: yhaH; COG3152" /db_xref="CDD:442386" gene complement(620666..621577) /locus_tag="PA0564" /db_xref="GeneID:879206" CDS complement(620666..621577) /locus_tag="PA0564" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249255.1" /db_xref="GeneID:879206" /translation="MDPLDRLIQLANLQGRLDQRCQLQGSWALEHPQAVPGEATFHIV MAGTCYCEFLDGGRLDLHPGDLILLPRGTPHLLRSDSPAQPCEPTVEHRGSIPLYQLN GPGEALDMLCGSYRYHAGASLFGALPERLLVHMDESTQQPLRALIGLMREEAESTRSG ARSIIDALATALFALALRAYLDRQPLGDGLFGLLGDARLGRALRAMLERPEHAWTLEQ LAQQAAMSRASFVRAFSALGGTSPWNLLTRIRMEKARGLLRQTQKSLLDIAAETGYQS EAAFSRNFRQAFGESPGRFRRQADSAR" misc_feature complement(621236..621574) /locus_tag="PA0564" /note="AraC/XylS family transcriptional regulators similar to Escherichia coli YkgD, N-terminal cupin domain; Region: cupin_YkgD-like_N; cd06995" /db_xref="CDD:380399" misc_feature complement(620690..620938) /locus_tag="PA0564" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene 621695..622033 /locus_tag="PA0565" /db_xref="GeneID:877835" CDS 621695..622033 /locus_tag="PA0565" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249256.1" /db_xref="GeneID:877835" /translation="MLNNWTEFVPAVKKAFGALGKQHPKMLAAYGALEEASAEGALDA KTRELISIAVAITTRCDGCIGVHTEAALKAGASEAEIAQTLATAISLNAGAAYVYSLR ALEAYDQFKK" misc_feature 621710..622030 /locus_tag="PA0565" /note="Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family [General function prediction only]; Region: YurZ; COG0599" /db_xref="CDD:440364" gene complement(622023..622538) /locus_tag="PA0566" /db_xref="GeneID:879287" CDS complement(622023..622538) /locus_tag="PA0566" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249257.1" /db_xref="GeneID:879287" /translation="MSDLPPRPAFWPYLPGYALLLLSVLLCASGSYRFVTPMALADGV DLVYLSQGLALLPLGTGLVGLLAGFLLHVRGRWLGALLALLPAALICAWNLYNYAAHG DEALSPSFAQYTQALLGLLGLGGVLSLVDLLHGRPSTLLRKGLLGLGWLALVAWLGLL FYLQRLYGLTF" gene 622726..622884 /locus_tag="PA0567" /db_xref="GeneID:877760" CDS 622726..622884 /locus_tag="PA0567" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249258.1" /db_xref="GeneID:877760" /translation="MDLIRILIAILLPPLGVFLQVGFGGAFWLNILLTLLGYIPGIVH AVYIIAKR" misc_feature 622726..622881 /locus_tag="PA0567" /note="Membrane potential modulator PMP3/YqaE, plasma membrane proteolipid 3 (PMP3)/Esi3/RCI2/UPF0057 family [Energy production and conversion]; Region: YqaE; COG0401" /db_xref="CDD:440170" gene complement(622894..623352) /locus_tag="PA0568" /db_xref="GeneID:879243" CDS complement(622894..623352) /locus_tag="PA0568" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249259.1" /db_xref="GeneID:879243" /translation="MELIRNLDDANMGEVYWRLYRRYISLFIENEADDAYAWRCARAL DELDDAVIERLCAASLRYRAARLERLGESAEEVAPARGVLERIEPGELIVPDPEQGDE AVIHLSLNCEWDREHGMEWIVRGGEVLYVGPFHGEDPWRDFTVKEPWNYA" gene complement(623368..623838) /locus_tag="PA0569" /db_xref="GeneID:881959" CDS complement(623368..623838) /locus_tag="PA0569" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249260.1" /db_xref="GeneID:881959" /translation="MIPFGLSPEQFRERYRRDLQRAAPGVIQRLRELLRQPLEEGLRD GEIQLFLGEDGRDAAEAWLYLNGASNRVDASDPRLFPGKALDLALGLGHAPDFDEAYF ADGFGGVDLLADTLQAWFAECWWKAGGWAWPIPLWLHVHDGFGDGRGIALTERC" gene complement(623852..624199) /locus_tag="PA0570" /db_xref="GeneID:879240" CDS complement(623852..624199) /locus_tag="PA0570" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249261.1" /db_xref="GeneID:879240" /translation="MKPELDALEAWLGRPLPAAFVAALEQHGGRLVEPGLLLYAADEL LERNRAFETSLYCPGYLAIGDDSGGRAVVMALDDHRQALFLVDHGAMTPDCFEPLAPS LEAWLEAGPCLPE" misc_feature complement(623876..624190) /locus_tag="PA0570" /note="SMI1 / KNR4 family (SUKH-1); Region: SMI1_KNR4; pfam09346" /db_xref="CDD:430545" gene complement(624189..624803) /locus_tag="PA0571" /db_xref="GeneID:880621" CDS complement(624189..624803) /locus_tag="PA0571" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249262.1" /db_xref="GeneID:880621" /translation="MTDRLPCRACGHLILPTTAARNDGLCMPCKGGYRQNIEDGKRFH AERRRYLASPQALYWSALVNRVYDGREGFAGLSPAERSYYAVSVLSGEVHNGGFDQYF GNSSGDQYQAARAGLRELEAEDALALLERAAALLFGDGPVPVSQAERQLRMPTWADEP DRDCEAALDALDTRFYALADALGERLLAHARHHALFALDEPDEA" misc_feature complement(624225..624587) /locus_tag="PA0571" /note="Domain of unknown function (DUF4375); Region: DUF4375; pfam14300" /db_xref="CDD:433851" gene complement(624994..627765) /locus_tag="PA0572" /db_xref="GeneID:878237" CDS complement(624994..627765) /locus_tag="PA0572" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249263.1" /db_xref="GeneID:878237" /translation="MSLSTTAFPSLQGENMSRSPIPRHRALLAGFCLAGALSAQAATQ EEILDAALVSGDSSQLTDSHLVALRLQQQVERIRQTRTQLLDGLYQNLSQAYDPGAAS MWVLPANPDNTLPFLIGDKGRVLASLSLEAGGRGLAYGTNVLTQLSGTNAAHAPLLKR AVQWLVNGDPGAATAKDFKVSVVGVDKTAALNGLKSAGLQPADAACNALTDASCASTS KLLVLGNGASAASLSATVRARLQAGLPILFVHTNGWNQSSTGQQILAGLGLQEGPYGG NYWDKDRVPSSRTRTRSVELGGAYGQDPALVQQIVDGSWRTDYDWSKCTSYVGRTTCD DVPGLSDFSKRVDVLKGALDAYNQKAQNLFALPGTTSLRLWLLWADAVRQNIRYPMDK AADTARFQETFVADAIVGYVREAGAAQKELGSYAGQRQQSMPVSGSEETLTLTLPSAQ GFTAIGRMAAPGKRLSIRIEDAGQASLAVGLNTQRIGSTRLWNTRQYDRPRFLKSPDI KLQANQSVALVSPYGGLLQLVYSGATPGQTVTVKVTGAASQPFLDIQPGEDSSQAIAD FIQALDADKADWLEIRSGSVEVHAKVEKVRGSIDKDYGGDVQRFIRELNEVFIDDAYT LAGFAIPNQAKTPAIQQECAARGWDCDSETLHKLPGTQHINVDQYAQCGGGCSGNPYD QTWGLNPRGWGESHELGHNLQVNRLKVYGGRSGEISNQIFPLHKDWRVLREFGQNLDD TRVNYRNAYNLIVAGRAEADPLAGVYKRLWEDPGTYALNGERMAFYTQWVHYWADLKN DPLQGWDIWTLLYLHQRQVDKSDWDANKAALGYGTYAQRPGNSGDASSTDGNDNLLLG LSWLTQRDQRPTFALWGIRTSAAAQAQVAAYGFAEQPAFFYANNRTNEYSTVKLLDMS QGSPAWPFP" misc_feature complement(625006..627615) /locus_tag="PA0572" /note="ImpA family metalloprotease; Region: ImpA_fam_HExGH; NF038322" /db_xref="CDD:468474" gene complement(628335..628670) /locus_tag="PA0573" /db_xref="GeneID:879310" CDS complement(628335..628670) /locus_tag="PA0573" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249264.1" /db_xref="GeneID:879310" /translation="MDYSPIVAQVWGMLTWFIPAALLIGLLKSPWAKGQIGELLVRLF AHWQLDRHTYRRLHNVTLNTPDGTTQIDHVFLSPYGIFVLETAGFQHLPIGLYRCIGE PCCRSQALA" misc_feature complement(<628413..628574) /locus_tag="PA0573" /note="Nuclease-related domain; Region: NERD; pfam08378" /db_xref="CDD:462454" gene complement(628763..629884) /locus_tag="PA0574" /db_xref="GeneID:879506" CDS complement(628763..629884) /locus_tag="PA0574" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249265.1" /db_xref="GeneID:879506" /translation="MNDPLWIWQQPDWPQFNWQAEALAPLLRSCSQAQGRLLGMLGAV GSDTEVQSSLDAMLQNIVTSSAIEGEQLNVGSVRSSLARRLGLHEEGRTTSRSEGLAE LLLDATHAHQEPLDEQRLFTWHRWLFPTDEQLLTRPLHIGALRGEEPMQVVSGRIDRP TVHFEAPPRAGLEAQLADFLAWFESSRRDASLDPFLRAGIAHFWFVTLHPFDDGNGRL TRAITDLALAQGEQQAIRFYAMSASILDDRAGYYRILEASQKSTLDITNWLQWFLATL LNSLEQALARIDRVLVKARFWQAHRSQTLSAEQVKVLNRLLDGGERGFEEGISAAQYQ AVAKVSKATATRHLSDLLEKGCIERLPGRGRSTRYQIAR" misc_feature complement(628778..629824) /locus_tag="PA0574" /note="Fic family protein [Transcription]; Region: COG3177" /db_xref="CDD:442410" gene complement(630434..630510) /locus_tag="PA0574.1" /db_xref="GeneID:3240220" tRNA complement(630434..630510) /locus_tag="PA0574.1" /product="tRNA-Met" /db_xref="GeneID:3240220" gene complement(630527..634264) /locus_tag="PA0575" /db_xref="GeneID:882126" CDS complement(630527..634264) /locus_tag="PA0575" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249266.1" /db_xref="GeneID:882126" /translation="MQRLQAVLLLCLACCWPGLAGALTLTPEERAWLAEHPSIRLGMD TSWPPFEYRDEQGRYQGLAAGYIGLLQERLSVSLTPVEPKTWTQVLEQAKDGRLDLLP GIMATPERQEYLSFTRPYLDFPIIILARKNGPMPKRIDELYGLKVAVVDHYAPHELLI AQHPDLTLLPLPSVAAALQALATGQADAFVGDFASSVWNLRQLKLNGLEISGETPYRY QLAMAVPRGQPILAGIVDKVLADLSAGEIERLQAPWVGGLLDRRPAWREMATYGLPIV LLILVSVAILLAMNRRLRREVSRRRQLERELRDSEQHYRGLVESLNAIAWEMRLEENR FTYVSPHAERLLGYPLGEWLQPGFWQRTLHPMDAEYAIHYCMSESQAGRDHSFDYRML AADGRVVWIRDLVTPITQGRDLLLRGLMIDITEAKLTEQAMRLSEQKFASVFHHCPDM VVLANGADGRFLAVNSTFEQQIGIAADDAIGKTATELGIWALPGLGPQVLEKLGHGNL TNLEVPLRRRNGSTFSALLSAQHVALDQTPALVVVIRDITHLVETQELLRISEEKFAN AFHAYPDGLLISSLEDGTLIDVNEGFTRLTGYRRDEVISRSTLELGLWVDTEDRKRLI SLVRHHTLTQGFTAPVRDRNGGIRQCEMSAHRISIDGEDCVLTIARDITERQLMQEKL QQAATVFESTAEGVMITDTRQRITAVNRAFSEITGYSEQEALGRSPSLLSSGQHDSSF YLAMWNQLERDGHWQGEIWNRRKTGELYPEWLTISAVHNPQGEITHFVGVFADISTLK YAQARLDYQAHHDPLTGLPNRLLFESRLNHALDEAREESRPGAVLFIDLDRFKHINDS LGHPIGDLLLKAIAERLRDQLRDVDTVARLGGDEFIILLPGLHQESDAEHVARKLLNA FTAPFQADGHEFFVSASVGIALFPKDGDDAPTLVKNADAAMYRAKSRGRSRIEYYTRE LTYLATERMALETELRRALERDELQLYYQPKLSLESGLLVGAEALVRWYHPLFGEISP ERFIPLAEDCGLILPLGDWVLEHACQQMGEWQKLHAPFGPLSVNLAGAQLGQPQLIER LEQLLEQSGLEPSRLQLEITESFIMNQTEEALAVLHGLKRLGVQLAIDDFGTGYSSLS YLKRLPLDILKIDKSFIRGLPDDPHDAAITRAIIALGRSMQLTVIAEGVETEGQQSFL THEGCEQIQGFVLSPPLPAELFASKFLKPRQPIGAPREAPV" misc_feature complement(633500..634159) /locus_tag="PA0575" /note="The type 2 periplasmic ligand-binding protein domain of the sensor-kinase BvgS and histidine kinase receptors, and related proteins; Region: PBP2_BvgS_HisK_like; cd01007" /db_xref="CDD:270228" misc_feature complement(632969..633337) /locus_tag="PA0575" /note="PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in...; Region: PAS; cl21578" /db_xref="CDD:473914" misc_feature complement(order(633077..633079,633092..633094, 633170..633178,633182..633184,633221..633223, 633239..633241,633251..633253)) /locus_tag="PA0575" /note="putative active site [active]" /db_xref="CDD:238075" misc_feature complement(order(633050..633052,633056..633058, 633140..633145,633152..633154,633176..633178, 633191..633193)) /locus_tag="PA0575" /note="heme pocket [chemical binding]; other site" /db_xref="CDD:238075" misc_feature complement(632219..632977) /locus_tag="PA0575" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature complement(630557..632572) /locus_tag="PA0575" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" gene complement(634371..636224) /gene="rpoD" /locus_tag="PA0576" /db_xref="GeneID:882038" CDS complement(634371..636224) /gene="rpoD" /locus_tag="PA0576" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor RpoD" /protein_id="NP_249267.1" /db_xref="GeneID:882038" /translation="MSGKAQQQSRLKELIARGREQGYLTYAEVNDHLPEDISDPEQVE DIIRMINDMGINVFETAPDADALLLAEADTDEAAAEEAAAALAAVESDIGRTTDPVRM YMREMGTVELLTREGEIEIAKRIEEGIREVMSAIAQFPGTVDSILADYNRIVAEGGRL SDVLSGYIDPDDGSLPAEEVEPVNLKDDSADSKEKDDEEEESDDSSDSDDEGDGGPDP EEARLRFTAVSEQLDKAKKALKKHGRGSKQATAELTGLAELFMPIKLVPKQFDALVAR VRSALEGVRAQERAIMQLCVRDARMPRADFLRLFPNHETDEKWVDSVLKSKPKYAEAI ERLRDDILRNQQKLAALESEVELTVAEIKEINRAMSIGEAKARRAKKEMVEANLRLVI SIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQ ARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELGERMDMPEDKIRKVLKIAKEP ISMETPIGDDEDSHLGDFIEDSTMQSPIEMATSESLKESTREVLAGLTAREAKVLRMR FGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEHLRSFLDE" misc_feature complement(634374..636224) /gene="rpoD" /locus_tag="PA0576" /note="RNA polymerase sigma factor RpoD; Validated; Region: PRK05658" /db_xref="CDD:235549" gene complement(636304..638298) /gene="dnaG" /locus_tag="PA0577" /db_xref="GeneID:882047" CDS complement(636304..638298) /gene="dnaG" /locus_tag="PA0577" /EC_number="2.7.7.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA primase" /protein_id="NP_249268.1" /db_xref="GeneID:882047" /translation="MAGLIPQSFIDDLLNRTDIVEVVSSRIQLKKTGKNYSACCPFHK EKTPSFTVSPDKQFYYCFGCGAGGNALGFVMDHDQLEFPQAVEELAKRAGMDVPREER GGRGHTPRQPTDSPLYPLLSAAAEFYKQALKSHPARKAAVNYLKGRGLTGEIARDFGL GFAPPGWDNLLKHLGGDNLQLKAMLDAGLLVENSDTGKRYDRFRDRVMFPIRDSRGRI IAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLYEARQKNRDLDEIMVVEGYMDVIAL AQQGIRNAVATLGTATSEEHIKRLFRLVPSILFCFDGDQAGRKAAWRALESVLPNLQD GKRVRFLFLPEGEDPDSLVRAEGEDAFRARITQQAQPLAEYFFQQLMLEADPATLEGK AHLATLAAPLLEKIPGNNLRLLMRQRLSEITGLSGENIGQLAHHSPPPSSMDHGASGV LDGDDYFAASAYYENEPSHAPFDAAPGYVEAQPRKSWNKDKKPWDGKKWDGKKKWDKG GRGDFKAPQRTPVSVESTTLNALRTLLHHPQLALKVDDAGTLAREQDTYAQLLVSLLE ALQKNPRQSSMQLIARWHGTPQGRLLQALGEKEWLIVQENLEKQFFDTITKLSESQRF GEREERLRSVMQKSYSELTDEEKALLREHYSVAASSPSQS" misc_feature complement(636991..638289) /gene="dnaG" /locus_tag="PA0577" /note="DNA primase (bacterial type) [Replication, recombination and repair]; Region: DnaG; COG0358" /db_xref="CDD:440127" misc_feature complement(636343..636711) /gene="dnaG" /locus_tag="PA0577" /note="DNA primase DnaG DnaB-binding; Region: DnaG_DnaB_bind; smart00766" /db_xref="CDD:197866" gene complement(638381..638830) /locus_tag="PA0578" /db_xref="GeneID:880823" CDS complement(638381..638830) /locus_tag="PA0578" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249269.1" /db_xref="GeneID:880823" /translation="MSEIKSRLLDAVKVAMRAQDKPRLTTLRLALADIKRVEVDERIE VDDARALLILDRMIKQRRDAQRQFSDAGRQDLAEVEAAEILVLQDFMPKPLDDHEIDA LIERSIVDSGAQGPQDMGKAMNLLRPQVQGRVDMAQVSQRLKARLSS" misc_feature complement(638390..638818) /locus_tag="PA0578" /note="Yqey-like protein; Region: YqeY; pfam09424" /db_xref="CDD:430602" gene complement(638900..639115) /gene="rpsU" /locus_tag="PA0579" /db_xref="GeneID:880307" CDS complement(638900..639115) /gene="rpsU" /locus_tag="PA0579" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S21" /protein_id="NP_249270.1" /db_xref="GeneID:880307" /translation="MPAVKVKENEPFDVALRRFKRSCEKAGVLAEVRSREFYEKPTAE RKRKAAAAVKRHAKKVQREQRRRERLY" misc_feature complement(638939..639115) /gene="rpsU" /locus_tag="PA0579" /note="Ribosomal protein S21 [Translation, ribosomal structure and biogenesis]; Region: RpsU; COG0828" /db_xref="CDD:440590" gene 639316..640341 /gene="gcp" /locus_tag="PA0580" /db_xref="GeneID:882271" CDS 639316..640341 /gene="gcp" /locus_tag="PA0580" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tRNA N6-adenosine threonylcarbamoyltransferase" /protein_id="NP_249271.1" /db_xref="GeneID:882271" /translation="MRVLGLETSCDETGVALYDSERGLLADALFSQIDLHRVYGGVVP ELASRDHVKRMLPLIRQVLDESGCTPADIDAIAYTAGPGLVGALLVGASCAQAMAFAW GVPAVGVHHMEGHLLAPMLEEQPPRFPFVALLVSGGHTQLVRVDGIGRYQLLGESVDD AAGEAFDKTAKLIGLGYPGGPEIARLAERGTPGRFVFPRPMTDRPGLDFSFSGLKTFT LNTWQRCVEAGDDSEQTRCDIALAFQTAVVETLLIKCRRALKQTGLKNLVIAGGVSAN QALRSGLEKMLGEMKGQVFYARPRFCTDNGAMIAYAGCQRLLAGQHDGPAISVQPRWP MESLPAV" misc_feature 639316..640320 /gene="gcp" /locus_tag="PA0580" /note="tRNA A37 threonylcarbamoyltransferase TsaD [Translation, ribosomal structure and biogenesis]; Region: TsaD; COG0533" /db_xref="CDD:440299" gene complement(640420..640989) /locus_tag="PA0581" /db_xref="GeneID:880814" CDS complement(640420..640989) /locus_tag="PA0581" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate acyltransferase PlsY" /protein_id="NP_249272.1" /db_xref="GeneID:880814" /translation="MVWLLAILAYLLGSLSFAVLLSRWFGTQDPRASGSGNPGATNML RVAGKKLAILTLLGDVGKGLLPVLVARWLGLGVMEEAWVGIAAVIGHLYPLYFNFRGG KGVATAAGMLLGLYPPAVLLAAAAWLLTFKLSRTSSLASLVATPLTLPLLAWQQPGAL LPMTVLTGLIVWRHRANLRDLFAGRERHF" misc_feature complement(640423..640989) /locus_tag="PA0581" /note="glycerol-3-phosphate 1-O-acyltransferase PlsY; Region: PRK00220" /db_xref="CDD:234691" gene 641073..641426 /gene="folB" /locus_tag="PA0582" /db_xref="GeneID:880775" CDS 641073..641426 /gene="folB" /locus_tag="PA0582" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="dihydroneopterin aldolase" /protein_id="NP_249273.1" /db_xref="GeneID:880775" /translation="MDRVFIEGLEVDTVIGVYDWERGIRQCLRLDLTLGWDNRPAAAG DDLALALDYAALSERVQEFARESHFQLVETFAERLAEVLMGERGIPWLRIRVTKPGAV PAARGVGVEIERGCR" misc_feature 641073..641417 /gene="folB" /locus_tag="PA0582" /note="Dihydroneopterin aldolase [Coenzyme transport and metabolism]; Region: FolB; COG1539" /db_xref="CDD:441148" gene 641417..641959 /locus_tag="PA0583" /db_xref="GeneID:880783" CDS 641417..641959 /locus_tag="PA0583" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249274.1" /db_xref="GeneID:880783" /translation="MSLIPVYLGLGSNVERERHLHAGLDALAGFLHDLRCSPVFESEP VGIKSGPFFNLVVSARTDLPLAELSLRLKHIEADNGRYAPERKGLPLDIDVLFYGDLV GDFDGLVLPRAEVLKNAFVLWPLSELAPNLEHPVARQPLGDLWREARIQQKLWPAPFE WRGQALTPEALLQAFPRSSL" misc_feature 641432..641878 /locus_tag="PA0583" /note="7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (folate biosynthesis) [Coenzyme transport and metabolism]; Region: FolK; COG0801" /db_xref="CDD:440564" gene complement(641932..643164) /gene="cca" /locus_tag="PA0584" /db_xref="GeneID:877618" CDS complement(641932..643164) /gene="cca" /locus_tag="PA0584" /EC_number="3.1.3.-" /EC_number="3.1.4.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase" /protein_id="NP_249275.1" /db_xref="GeneID:877618" /translation="MQIYKVGGAVRDRLLGRPVTDIDWVVVGASSDEMLARGYRPVGA DFPVFLHPQSGEEYALARTERKSGRGYGGFTFHASPEVTLEEDLTRRDLTINAMAEDE QGRVIDPYGGQADLEARLLRHVSPAFAEDPLRVLRVARFAARYAGLGFRVAAETLALM RQLAESGELQALTPERSWKEISRALMEPNPEVFIQVLHDCGALAELIPEVEALFGVPQ PAAHHPEIDTGVHVLSVLQQCARHRQPLSVRWACLLHDLGKGLTSEADWPRHIAHEAR GVPLIDAVNQRFRVPRECQELARLVGEYHTHAHRALELRPNTLLELLQSFDVYRRPQR FEEFVAASEMDARGRLGLEQRDYPQAAYLLGAAQAARAVSVKPLVEKGLKGAELGEAL KRARLAALKAYKEERGKA" misc_feature complement(641938..643164) /gene="cca" /locus_tag="PA0584" /note="multifunctional CCA addition/repair protein; Region: cca; PRK10885" /db_xref="CDD:182810" gene complement(643208..643714) /locus_tag="PA0585" /db_xref="GeneID:878052" CDS complement(643208..643714) /locus_tag="PA0585" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249276.1" /db_xref="GeneID:878052" /translation="MRLFAIVLLCLVLATCASHIPSARVTHPASAGLPGLQGFQLMPP EQAVDALPYRNRYPLINAELRQGLAAHGYHESATPQFRVYYWLALRDAPLEFRPDLPP TSGMGPYLAIHRLRDETGTLRVRLVDLEERVLWEGMVSTGLSPARANPEQLELAVGAL LRQLPRAR" misc_feature complement(643220..643600) /locus_tag="PA0585" /note="Domain of unknown function (DUF4136); Region: DUF4136; pfam13590" /db_xref="CDD:463929" gene complement(643808..645361) /locus_tag="PA0586" /db_xref="GeneID:879539" CDS complement(643808..645361) /locus_tag="PA0586" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249277.1" /db_xref="GeneID:879539" /translation="MSKRQPIATGSEWTFELIQQYDREISRIAERYALDTYPNQIEVI TAEQMMDAYASVGMPIGYNHWSYGKHFLSTEKNYKRGQMGLAYEIVINSDPCIAYLME ENTQCMQALVIAHACYGHNSFFKGNYLFRTWTDASSIIDYLVFAKQYIMQCEERYGID AVEDLLDSCHALMNYGVDRYKRPYPISAEEERQRQKEREELIQRQVNDLWRTIPRVGG KDKEQSMARYPSEPQENILYFIEKNAPLLEPWQREVIRIVRKIAQYFYPQRQTQVMNE GWATFWHYTLLNDLYDEGLVNDGFMMEFLQYHTSVVYQPSFDSPYYSGINPYALGFAM YRDIRRICEEPTDEDRRWFPDIAGSDWLATLKFAMKSFKDESFILQFLSPKVIRDLKL FSILDDDQKDDLLVAAIHDEAGYRTIRETLAAQYNLGNREPNIQIWNVDRRGDRSLTL RHQQFDRQPLSDSTADVLKHLHRLWGFDIHLETLQGDQLVQTHHMPPKGASEGEEGYP RLDLIIPPI" misc_feature complement(643868..645355) /locus_tag="PA0586" /note="SpoVR family protein; Provisional; Region: PRK11767" /db_xref="CDD:236973" gene complement(645358..646629) /locus_tag="PA0587" /db_xref="GeneID:879664" CDS complement(645358..646629) /locus_tag="PA0587" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249278.1" /db_xref="GeneID:879664" /translation="MSYVIDRRLNGKNKSTVNRQRFLRRYREHIKKAVEEAVSRRSIT DMEHGEQISIPGRDIDEPVLHHGRGGRQTVVHPGNKEFTAGEHIARPSGGGGGRGGGK ASNSGEGMDDFVFQITQEEFLDFMFEDLELPNLVKRHITGTDTFKTVRAGISNDGNPS RINIVRTLRSAHARRIALSGGSRAKLRAALKELERIKREEPDNLGDIQELELEIAKLR ARIDRVPFLDTFDLKYNLLVKQPNPTSKAVMFCLMDVSGSMTQATKDIAKRFFILLYL FLKRNYEKIEVVFIRHHTSAREVDEEEFFYSRETGGTIVSSALKMMQEIMAERYPTHE WNIYAAQASDGDNWNDDSPVCRDILLKQIMPFVQYYTYVEITPREHQALWFEYERVRE AFEDSFAQQQIVSASDIYPVFRELFQRRLVA" misc_feature complement(645370..646593) /locus_tag="PA0587" /note="Protein of unknown function (DUF444); Region: DUF444; pfam04285" /db_xref="CDD:427839" gene complement(646730..648652) /locus_tag="PA0588" /db_xref="GeneID:879092" CDS complement(646730..648652) /locus_tag="PA0588" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249279.1" /db_xref="GeneID:879092" /translation="MSIFSHFQERFEATRQEEYSLQEYLDLCKQDKTAYASAAERLLM AIGEPELLDTSVDSRLSRIFSNKVIRRYPAFADFHGMEECIDQIVAFFRHAAQGLEEK KQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNPDEDGAILEED YGIPRRYLRSIMSPWATKRLNEFGGDISQFRVVKLYPSILNQIAIAKTEPGDENNQDI SALVGKVDIRKLEEYPQNDADAYSYSGALCRANQGLMEFVEMFKAPIKVLHPLLTATQ EGNYNSTEGLGALPYSGIILAHSNESEWHSFRNNKNNEAFIDRIYIVKVPYCLRVADE IKIYDKLLVNSSLAHAHCAPDTLKMLSQFSVLSRLKEPENSNIYSKMRVYDGENLKDT DPKAKSIQEYRDSAGVDEGMAGLSTRFAFKILSKVFNFDPHEVAANPVHLLYVLEQQI EQEQFQPETRERYLRFIKEYLAPRYVEFIGKEIQTAYLESYSEYGQNIFDRYVLYADF WIQDQEYRDPETGEILNRAALNEELEKIEKPAGISNPKDFRNEIVNFVLRARAGNNGK NPSWLSYEKLRVVIEKKMFSNTEDLLPVISFNAKASKEDQQKHNDFVKRMVERGYTEK QVRLLSEWYLRVRKSQ" misc_feature complement(646733..648652) /locus_tag="PA0588" /note="PrkA family serine protein kinase; Provisional; Region: PRK15455" /db_xref="CDD:185352" gene complement(648931..649263) /locus_tag="PA0589" /db_xref="GeneID:880468" CDS complement(648931..649263) /locus_tag="PA0589" /EC_number="2.8.1.1" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="thiosulfate sulfurtransferase" /protein_id="NP_249280.1" /db_xref="GeneID:880468" /translation="MSDTFQRIAPEQVRQLRENGAQVVDIRDPQSFAVGHISGSRHID NHSVADFIAAADLDAPLVVVCYHGNSSQSAAAYFIQQGFSDVYSLDGGFELWRSVYPA DTSSGEAE" misc_feature complement(648940..649257) /locus_tag="PA0589" /note="Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins...; Region: RHOD; cl00125" /db_xref="CDD:444705" misc_feature complement(649069..649071) /locus_tag="PA0589" /note="active site residue [active]" /db_xref="CDD:238721" gene complement(649307..650158) /gene="apaH" /locus_tag="PA0590" /db_xref="GeneID:880834" CDS complement(649307..650158) /gene="apaH" /locus_tag="PA0590" /EC_number="3.6.1.41" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bis(5'-nucleosyl)-tetraphosphatase" /protein_id="NP_249281.1" /db_xref="GeneID:880834" /translation="MAVYAVGDLQGCLDPLKCLLERVAFDPAKDRLWLVGDLVNRGPQ SLETLRFLYAMRESVVSVLGNHDLHLLAVAHKSERLKKSDTLREILEAPDREPLLDWL RRLPLLHYDEQRKVALVHAGIPPQWSLEKARLRAAEVEQALRDDQRLPLFLDGMYGNE PAKWDKKLHGIDRLRVITNYFTRMRFCTEDGKLDLKSKEGLDTAPPGYAPWFSFPSRK TRGEKIIFGHWAALEGHCDEPGLFALDTGCVWGARMTLLNVDSGERLSCDCAEQRAPA RPAATPA" misc_feature complement(649352..650158) /gene="apaH" /locus_tag="PA0590" /note="symmetrical bis(5'-nucleosyl)-tetraphosphatase; Region: apaH; PRK00166" /db_xref="CDD:234673" gene complement(650158..650538) /locus_tag="PA0591" /db_xref="GeneID:880916" CDS complement(650158..650538) /locus_tag="PA0591" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="protein ApaG" /protein_id="NP_249282.1" /db_xref="GeneID:880916" /translation="MSDTQHQVNVRVDTRYLPEQSAPEQNRFAFAYTVTIENQGEVPA QLLSRHWIITDGDGRTQEVRGAGVVGEQPLIAPGAQHTYTSGTVLATRVGSMRGSYQM LGSDGIAFDAAIPVFRLAVPGALH" misc_feature complement(650161..650538) /locus_tag="PA0591" /note="CO2+/MG2+ efflux protein ApaG; Reviewed; Region: apaG; PRK05461" /db_xref="CDD:180098" gene complement(650575..651381) /gene="ksgA" /locus_tag="PA0592" /db_xref="GeneID:880847" CDS complement(650575..651381) /gene="ksgA" /locus_tag="PA0592" /EC_number="2.1.1.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribosomal RNA small subunit methyltransferase A" /protein_id="NP_249283.1" /db_xref="GeneID:880847" /translation="MSELYQHRARKRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGP GQGALTEGLLGSGARLDVIELDQDLIPLLKLKFGLESRFSLHQGDALKFDFASLVESG EKLRVVGNLPYNISTPLIFHLLEHAPVIEDMHFMLQKEVVERLAATPGGGDWGRLSIM VQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLTPFAEPPHPARDPKLLERVVREAFNQR RKTLRNTLKPLLSVEDIEAAEVDPTLRPEQLDLAAFVRLANQLAELPGNR" misc_feature complement(650593..651381) /gene="ksgA" /locus_tag="PA0592" /note="16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity) [Translation, ribosomal structure and biogenesis]; Region: RsmA; COG0030" /db_xref="CDD:439801" protein_bind complement(651481..651493) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(651497..652483) /gene="pdxA" /locus_tag="PA0593" /db_xref="GeneID:880733" CDS complement(651497..652483) /gene="pdxA" /locus_tag="PA0593" /EC_number="1.1.1.262" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="4-hydroxythreonine-4-phosphate dehydrogenase" /protein_id="NP_249284.1" /db_xref="GeneID:880733" /translation="MSLRFALTPGEPAGIGPDLCLLLARSAQPHPLIAIASRTLLQER AGQLGLAIDLKDVSPAAWPERPAKAGQLYVWDTPLAAPVRPGQLDRANAAYVLETLTR AGQGCLDGHFAGMITAPVHKGVINEAGIPFSGHTEFLADLTHTAQVVMMLATRGLRVA LATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRILVCGLNPHAGEGGHLG REEIEVIEPCLERLRGEGLDLIGPLPADTLFTPKHLEHCDAVLAMYHDQGLPVLKYKG FGAAVNVTLGLPIIRTSVDHGTALDLAGSGRIDSGSLQVALETAYQMAASRC" misc_feature complement(651503..652483) /gene="pdxA" /locus_tag="PA0593" /note="4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed; Region: pdxA; PRK00232" /db_xref="CDD:234696" gene complement(652480..653772) /gene="surA" /locus_tag="PA0594" /db_xref="GeneID:879552" CDS complement(652480..653772) /gene="surA" /locus_tag="PA0594" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="chaperone SurA" /protein_id="NP_249285.1" /db_xref="GeneID:879552" /translation="MKIKLCNRLRPLALGAALLCSFAHAEVVPLDRVVAIVDNDVIMQ SQLDQRLREVHQTLLKRGAPLPPEHVLTQQVLERLIIENIQQQIGDRSGIRISDEELN QAMGTIAQRNGMSLEQFQTALTRDGLSYADAREQVRREMVISRVRQRRVAERIQVSEQ EVKNFLASDMGKIQLSEEYRLANILIPVPEAASSDVIQAAARQAQELYQQLKQGADFG QLAISRSAGDNALEGGEIGWRKAAQLPQPFDSMIGSLAVGDVTEPVRTPGGFIILKLE EKRGGSKMVRDEVHVRHILLKPSEIRSEAETEKLAQKLYERIQSGEDFGELAKSFSED PGSALNGGDLNWIDPEALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSS EKFREQQAVSVLRNRKYDEELQAWLRQIRDEAYVEIKQ" misc_feature complement(652489..653709) /gene="surA" /locus_tag="PA0594" /note="peptidyl-prolyl cis-trans isomerase SurA; Provisional; Region: PRK10770" /db_xref="CDD:236758" gene complement(653753..656527) /gene="ostA" /locus_tag="PA0595" /db_xref="GeneID:880756" CDS complement(653753..656527) /gene="ostA" /locus_tag="PA0595" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="organic solvent tolerance protein OstA" /protein_id="NP_249286.1" /db_xref="GeneID:880756" /translation="MAVKSLVFRRKFPLLVTGSLLALQPVAALTVQAADQFDCKVSAT GGWDCSPLQNANANLPPRPAHTATSVSTAAAGSSVSGSGGETVEAEPTQRLVTESGGR ALKSRSADYSHLDWIPREKLTAAQLAEIGPYCGGSYIEPVRPGMDDGAPSDESPTYVS AKASRYEQEKQIATLAGDVVLRQGSMQVEGDEANLHQLENRGELVGNVKLRDKGMLVV GDHAQVQLDNGEAQVDNAEYVIHKAHARGSALYAKRSENAIIMLKDGTYTRCEPSSNA WTLKGNNVKLNPATGFGTATNATLRVKDFPVFYTPYIYFPIDDRRQSGFLPPSFSSTS DTGFTLVTPYYFNLAPNYDATLYPRYMAKRGMMLEGEFRYLTHSSEGIVNAAYLNDKD DHREGFPDYSKDRWLYGLKNTTGLDSRWLAEVDYTRISDPYYFQDLDTDLGVGSTTYV NQRGTLTYRGDTFTGRLNAQAYQLATTTDVTPYDRLPQITFDGFLPYNPGGMQFTYGT EFVRFDRDLDENIYFNDDGSIRGKRPDASLQGLARATGDRMHLEPGMSLPMTRSWGYV TPTLKYLYTKYDLDLDSQGKTDLNKRDESFDSNQDRSLPLVKVDSGLYFDRDTTFAGT PFRQTLEPRAMYLYVPYKDQDSLPVFDTSEPSFSYDSLWRENRFTGKDRIGDANQLSL GVTSRFIEENGFERASISAGQIYYFRDRRVQLPGLTEKDLKRLNLDPSGLDNDSWRSP YAFAGQYRFNRDWRINSDFNWNPNTSRTESGSAIFHYQPEVDPGKVVNVGYRYRADAR RFDSSRGTFRYGNENDIIKQHDFSVIWPLVPQWSVLARWQYDYNKNRTLEAFGGFEYD SCCWKLRLINRYWLDVDDDAFLVQSEKADRGIFLQIVLKGLGGIVGNKTEMFLDKGIQ GYRQREDQAM" misc_feature complement(653828..656086) /gene="ostA" /locus_tag="PA0595" /note="LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA) [Cell wall/membrane/envelope biogenesis]; Region: LptD; COG1452" /db_xref="CDD:441061" protein_bind complement(654082..654094) /gene="ostA" /locus_tag="PA0595" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0594" /bound_moiety="AmrZ" protein_bind complement(655099..655111) /gene="ostA" /locus_tag="PA0595" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0594" /bound_moiety="AmrZ" protein_bind 655127..655139 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0594" /bound_moiety="AmrZ" gene 656654..657670 /locus_tag="PA0596" /db_xref="GeneID:882000" CDS 656654..657670 /locus_tag="PA0596" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249287.1" /db_xref="GeneID:882000" /translation="MSDDARFQQLNCWLDSCLPELFVAEGWGEVPPAELIPASSDASF RRYFRWQGGDRSLVVMDAPPPQEDCRPFVKVAGLLAGAGVHVPRILAQDLENGFLLLS DLGRQTYLDVLHPGNADELFEPALDALIAFQKVDVAGVLPAYDEAVLRRELQLFPDWY LARHLGVELEGETLARWKRICDLLVRSALEQPRVFVHRDYMPRNLMLSEPNPGVLDFQ DALHGPVTYDVTCLYKDAFVSWPEPRVHAALNRYWKKATWAGIPLPPSFEDFLRASDL MGVQRHLKVIGIFARICHRDGKPRYLGDVPRFFRYLETAVARRPELAELGELLASLPQ GAEA" misc_feature 656663..657667 /locus_tag="PA0596" /note="Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family [General function prediction only]; Region: COG3178" /db_xref="CDD:442411" gene 657667..658341 /locus_tag="PA0597" /db_xref="GeneID:878173" CDS 657667..658341 /locus_tag="PA0597" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="nucleotidyl transferase" /protein_id="NP_249288.1" /db_xref="GeneID:878173" /translation="MKAMILAAGRGERMRPTTLHTPKPLIEAAGVPLIERQLLALRQA GVDDWVINHAWLGEQIEAYLGDGSRLGGRIAYSPEGEPLETGGGIFRALPLLGEQPFL LLNGDVWSDFDYSRLHLADGDLAHLVLVDNPAHHPAGDFHLDAGGRVGETREAGGNLT YSGIAVLHPALFEGCQPGAFKLAPLLRKAIAAGRVSGEHHRGQWVDVGTHERLAEVER LLAEHA" misc_feature 657670..658332 /locus_tag="PA0597" /note="NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis protein s [Translation, ribosomal structure and biogenesis, Cell wall/membrane/envelope biogenesis]; Region: GCD1; COG1208" /db_xref="CDD:440821" gene 658343..659101 /locus_tag="PA0598" /db_xref="GeneID:878221" CDS 658343..659101 /locus_tag="PA0598" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249289.1" /db_xref="GeneID:878221" /translation="MLWPATLIGAGAGWALASIPGALLGGLLGQLLDRRLRLESWRGL LARLRGRAVNDEDDLLFQLLGYLAKSGGRVEEMHIRQAREEMALRKLDRRAQRRAIAS FGKGKAGIAHLQAEVARLKGERAEAVLLACWRMAWAGGVLSQSARQLVLQWGRWLGWS AERTERLSARVMPKRTRAVARDSYREALLLLGVEAGSEPALIKRAYRKLISQHHPDKL AGAGASVERVRAATEKTRELQAAYALVREREGFR" misc_feature <658523..659098 /locus_tag="PA0598" /note="co-chaperone DjlA; Region: djlA; PRK09430" /db_xref="CDD:236512" gene complement(659102..660163) /locus_tag="PA0599" /db_xref="GeneID:878592" CDS complement(659102..660163) /locus_tag="PA0599" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249290.1" /db_xref="GeneID:878592" /translation="MPAFSLLPKPSALLPLLLAAAFLPPAFVHAEEEAAKDQPQAPVE RPAVSERSQDEAKGLERQLPEDGQQILKAGDESFLTLWLPANTAEAEGVVILVPGDGE SPDWPQAIGPLRRKLPDAGWQTLSLALPDPQSTAPVTRPAESAASASADKDASAADSA SKPDVKGESGNAPAPESTAEAGSGEPAQSEDQAPPPAIDPVEQRKAHAERVMARLQAS IDLALQHEPKSVVLLGHGTGAYWAARYLAEKEPAEIHNLLLVAAEVPRDFRPALEDMV PKLKLATGDFYYRDARADREAARLRMQAGKRQKHPAYVQIAMQALPADPKAEQEQLYR RIRGWLSLHLQADAQKPAE" misc_feature complement(659141..660076) /locus_tag="PA0599" /note="Protein of unknown function (DUF3530); Region: DUF3530; pfam12048" /db_xref="CDD:432287" gene 660315..662708 /locus_tag="PA0600" /db_xref="GeneID:880670" CDS 660315..662708 /locus_tag="PA0600" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_249291.1" /db_xref="GeneID:880670" /translation="MLRRCCLLFFCLLLSLPVRAEESVALPLTAELRTWLAEHRELRV GVVTEAPYAQYDRRLQQYSGANVELMGWLATAMQVTLRWQGYPDQAALDDALRAGRVD IAPGLSQTPAGLRLWLFSDPYLRVSRLVVGKRDGSGSVELEQLERDTRVAVRAGSSVA DYLSSTYSGLQWVSADSEREVLRAVLAGQARYAVIDEAQLSRLTREPEFAELAVVGDI GYPQLLRVATRRDWPELAMVVDQALRSLPRKSLDQLHERWLQPKYPRLGESPGFWQNL SILLGLLLAGALVAVFLQRRQQHALEARLYGARRDLELRQAAEEALRLTQFSIDNSTL GILWVNWDSRVRYANRAAEQMLGHADGQLVDRPLADFEPGLDMDRWLNLWRRARNSEE GPLSFETRCLRADGSWLPADVSLSFLRFGTSEYLVVFLSDVTERRRAREALQESEARM KGIASNVPGMVFRLERPRAGAFSDFAYISEGSEALVGYSARELIESGRGIRGLVHPDD RERYWSSQMAALDENRDWHWQGRILTRQGELRWADIKASARCFEDGRAVWDGVVWDIT ANKQIELELGESRAQLRELSAHLESVREEEKARIAREVHDELGQVLTVLKLETSMCEL AYADAQEGLRERLGNMKKLIAQLFQLVRDVATALRPPILDAGIGSAVEWQARRFEART QIPCLVEVPENSPQLVDAKAIGLFRILQEALTNVMRHAEAHTVQLRLLREGDELCLSV SDDGRGFDVATVGRGSSFGLVGMRERVLMMGGTLDIDSAPGEGTTLSVRIPLGVAGP" misc_feature 660429..661091 /locus_tag="PA0600" /note="The type 2 periplasmic ligand-binding protein domain of the sensor-kinase BvgS and histidine kinase receptors, and related proteins; Region: PBP2_BvgS_HisK_like; cd01007" /db_xref="CDD:270228" misc_feature 661251..662039 /locus_tag="PA0600" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature 662049..662693 /locus_tag="PA0600" /note="Signal transduction histidine kinase ComP [Signal transduction mechanisms]; Region: ComP; COG4585" /db_xref="CDD:443642" gene 662754..663386 /locus_tag="PA0601" /db_xref="GeneID:882060" CDS 662754..663386 /locus_tag="PA0601" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_249292.1" /db_xref="GeneID:882060" /translation="MVIRVLVAEDHTIVREGIKQLIGMAKDLQVVGEATNGEQLLETL RGTPCEVVLLDISMPGVNGLEAIPRIRALNEPPAILVLSMHDEAQMAARALKIGAAGY ATKDSDPALLLTAIRRVAGGGRYIDPDLADRMVFEVGLTDSRPPHALLSEREFSVFER LVQGANVNEIAQQLAVSNKTISTHKARLMQKLNAHSVADLVRYAMEHRLL" misc_feature 662760..663383 /locus_tag="PA0601" /note="response regulator; Provisional; Region: PRK09483" /db_xref="CDD:236538" gene 663515..664549 /locus_tag="PA0602" /db_xref="GeneID:880771" CDS 663515..664549 /locus_tag="PA0602" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_249293.1" /db_xref="GeneID:880771" /translation="MLPAMRTGLLCALLGVTAPAWAEYVTVISFGGANKEAQETAFYK PFKSATGNRVVHGSYNGDLAKLKRMVEISHVSWDVVEVEAPELARGCEEGLFEKLDMA KVGDPADFVPGAVQPCGVGIFVWTTLLAYNPGKVAGSPQGWADFWDVKKFPGKRGLRW GAKYSLEFALMADGVAPKDVYQTLATPAGVERAFRKLDELKPYIHWWKSGQDPVRDLA DGTVVMSSAYNGRIAAAQAEKQRLAMVWSGGVYDFDFWALPVGVWKKQLAEEFIRFAS QPEQQKAFAENIAYGPANRKAVGLLDPQVAANLPTAPQNMQNAVGMNVAFWAEHGEAL EQRFQNWAKR" misc_feature 663587..664390 /locus_tag="PA0602" /note="The periplasmic-binding component of an uncharacterized ABC transport system from Rhodopseudomonas palustris CGA009 and related proteins; contains the type 2 periplasmic-binding fold; Region: PBP2_polyamine_RpCGA009; cd13589" /db_xref="CDD:270307" misc_feature order(663605..663607,663995..663997,664196..664198, 664268..664270,664274..664276) /locus_tag="PA0602" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270307" misc_feature <664280..664534 /locus_tag="PA0602" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" gene 664783..665892 /locus_tag="PA0603" /db_xref="GeneID:880619" CDS 664783..665892 /locus_tag="PA0603" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_249294.1" /db_xref="GeneID:880619" /translation="MAETQGGDVLVSFRGVQKSYDGETLIVKDLNLDIRKGEFLTLLG PSGSGKTTSLMMLAGFETPTAGEILLAGRSINNVPPHKRDIGMVFQNYALFPHMTVAE NLAFPLSVRGMSKTDVKERVKRALSMVQLDAFAGRYPAQLSGGQQQRVALARALVFEP QLVLMDEPLGALDKQLREHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQG EIQQIEPPRNLYEQPRNTFVANFIGENNRLSGQLLSCDGERCVVGLPRGEKVEALAVN VGQPGEPVTLSIRPERVRLNGASESCVNRFSGRVAEFVYLGDHVRVRLEVCGRDDFFV KQPIAELDPTLSVGDVVPLGWQVEHVRALDPLPAA" misc_feature 664810..665871 /locus_tag="PA0603" /note="ABC-type Fe3+/spermidine/putrescine transport systems, ATPase component [Amino acid transport and metabolism]; Region: PotA; COG3842" /db_xref="CDD:443052" gene 665948..666994 /locus_tag="PA0604" /db_xref="GeneID:879023" CDS 665948..666994 /locus_tag="PA0604" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_249295.1" /db_xref="GeneID:879023" /translation="MSKSLKAASLKFATLAAGLACAAQAMAVDLTVVSFGGANKSAQI KAFYEPYQKATGNRIVAGEYNGEMAKVKAMVDTNSVSWDLVEVESPELSRGCDEGLFE ELDPAQFGKTEDFVPGAIQPCGVGFFVWSTVLAYNADKLKSAPTSWADFWDIKKFPGK RGLRKGAKYTLEFALMADGVAPKDVYGVLATKEGQDRAFKKLDEIKSSIQWWEAGAQP PQYLASGDVVMSSAYNGRIAAVQKESNLKVVWNGGIYDFDAWAIPKGAKKREETLKFI AFSVQPQQQKTYSENIAYGPANKQAVPLLDKALLKDMPTTPENIQNQVAMDVTFWADY GEQLEQRFNAWAAR" misc_feature 666032..666835 /locus_tag="PA0604" /note="The periplasmic-binding component of an uncharacterized ABC transport system from Rhodopseudomonas palustris CGA009 and related proteins; contains the type 2 periplasmic-binding fold; Region: PBP2_polyamine_RpCGA009; cd13589" /db_xref="CDD:270307" misc_feature order(666053..666055,666443..666445,666644..666646, 666713..666715,666719..666721) /locus_tag="PA0604" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270307" gene 667108..668355 /locus_tag="PA0605" /db_xref="GeneID:878376" CDS 667108..668355 /locus_tag="PA0605" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_249296.1" /db_xref="GeneID:878376" /translation="MATAVPMSQAAGSTLKQRLARAERMNRLKSQALILPLLAFLVLT FLVPIAALLYKSVSNPEVVRSLPLTVEAISAWDGKSLPADAVYKALSQDLAEARRNQT IGDLSKRLNMELAGYRSLMAKTARKLPFKEEPASYKDAMEQLDERWGDPAYWQVIRRN ASSYTPYYLLAALDHRIDDLGEVARATPDQAIYLDIFARTFWMGAVITIICLLLAYPL AYLLANLPTRKSNLLMILVLLPFWTSILVRVAAWIVLLQSGGLINGALLKLGLIDQPL QLVFNRTGVYIAMVHIMLPFMILPIYSVMKGISPSYMRAAISLGCHPFASFWRVYFPQ TVAGVGAGCLLVFILSIGYYITPALLGSPNDQMVSYFVAFYTNSTINWGMATALGGLL LLATLVLYVVYSWLVGASRLRLG" misc_feature <667681..668259 /locus_tag="PA0605" /note="ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]; Region: PotB; COG1176" /db_xref="CDD:440789" gene 668461..669291 /locus_tag="PA0606" /db_xref="GeneID:880768" CDS 668461..669291 /locus_tag="PA0606" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_249297.1" /db_xref="GeneID:880768" /translation="MLSPYMSPVERLWFYSLRILCGLVLLFLVLPVLVIVPLSFNSGT FLVYPLQGFSLRWYADFFQSAEWMRSLTNSMIVAPAATLLAMVFGTLAAIGLTRGEFR GKALVMSLMISPMVVPVVIIGVASYLFFAPLGLGNSYLSLIVVHAVLGVPFVIITVSA TLQGFNYNLVRAAASLGAPPLTTFFRVTLPLIAPGVISGALFAFATSFDEVVVTLFLA GPEQATLPRQMFSGIRENLSPTIAAAATLLIGFSVLLLLTLEWLRGRSEKMRTAQPGG " misc_feature 668575..669270 /locus_tag="PA0606" /note="ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]; Region: PotC; COG1177" /db_xref="CDD:440790" gene 669415..670089 /gene="rpe" /locus_tag="PA0607" /db_xref="GeneID:878162" CDS 669415..670089 /gene="rpe" /locus_tag="PA0607" /EC_number="5.1.3.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribulose-phosphate 3-epimerase" /protein_id="NP_249298.1" /db_xref="GeneID:878162" /translation="MQPFAIAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVP NLTIGPMVCSALRKYGVSAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEASQHIDRS LQLIRDGGCKAGLVFNPATPLEVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLRE ARALIDASGREIRLEIDGGVNVKNIREIAAAGADTFVAGSAIFNAPDYAEVIRAMHAE LAQAHQ" misc_feature 669430..670080 /gene="rpe" /locus_tag="PA0607" /note="Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; Region: Rpe; COG0036" /db_xref="CDD:439806" gene 670089..670907 /locus_tag="PA0608" /db_xref="GeneID:882093" CDS 670089..670907 /locus_tag="PA0608" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phosphoglycolate phosphatase" /protein_id="NP_249299.1" /db_xref="GeneID:882093" /translation="MSAAEPFFATRLPRLVMFDLDGTLVDSVPDLTAAVDSMLASFGR PPAGIEKVRQWIGNGARVLVRRALAGSIEHDGIGEEETEAALALFMEAYADSHALTEV YPGVVDTLKWLKRNGVEMALITNKPERFVAPLLDEMKLGRYFRWIIGGDTLPQQKPDP AALLFVMKMAGIEPEDALFVGDSRNDVLAAKAAGVRCAALTYGYNHGRPIAEEAPTLV IDNLRDLLPCADQAAEIVLPDDSLSPSDQRDQAVAVSKLWMKVIKALARWRWRA" misc_feature 670089..670904 /locus_tag="PA0608" /note="phosphoglycolate phosphatase; Provisional; Region: PRK13223" /db_xref="CDD:171912" gene 670980..672458 /gene="trpE" /locus_tag="PA0609" /db_xref="GeneID:879191" CDS 670980..672458 /gene="trpE" /locus_tag="PA0609" /EC_number="4.1.3.27" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="anthranilate synthase component I" /protein_id="NP_249300.1" /db_xref="GeneID:879191" /translation="MNREEFLRLAADGYNRIPLSFETLADFDTPLSIYLKLADAPNSY LLESVQGGEKWGRYSIIGLPCRTVLRVYDHQVRISIDGVETERFDCADPLAFVEEFKA RYQVPTVPGLPRFDGGLVGYFGYDCVRYVEKRLATCPNPDPLGNPDILLMVSDAVVVF DNLAGKIHAIVLADPSEENAYERGQARLEELLERLRQPITPRRGLDLEAAQGREPAFR ASFTREDYENAVGRIKDYILAGDCMQVVPSQRMSIEFKAAPIDLYRALRCFNPTPYMY FFNFGDFHVVGSSPEVLVRVEDGLVTVRPIAGTRPRGINEEADLALEQDLLSDAKEIA EHLMLIDLGRNDVGRVSDIGAVKVTEKMVIERYSNVMHIVSNVTGQLREGLSAMDALR AILPAGTLSGAPKIRAMEIIDELEPVKRGVYGGAVGYLAWNGNMDTAIAIRTAVIKNG ELHVQAGGGIVADSVPALEWEETINKRRAMFRAVALAEQSVE" misc_feature 671025..672437 /gene="trpE" /locus_tag="PA0609" /note="Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism, Coenzyme transport and metabolism]; Region: TrpE; COG0147" /db_xref="CDD:439917" gene complement(672777..673091) /gene="prtN" /locus_tag="PA0610" /db_xref="GeneID:877720" CDS complement(672777..673091) /gene="prtN" /locus_tag="PA0610" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator PrtN" /protein_id="NP_249301.1" /db_xref="GeneID:877720" /translation="MQPSIAPSTPIPRQETVELVYRIFGDVLVPLEQVRERWFRNLNK ENFSKALACGRIALPVTTLDDSHKAMQFVALDHLAAYVDQRANQAGSARRAQPGADSI AS" misc_feature complement(672825..673046) /gene="prtN" /locus_tag="PA0610" /note="Pyocin activator protein PrtN; Region: PyocinActivator; pfam11112" /db_xref="CDD:431661" gene complement(673191..673961) /gene="prtR" /locus_tag="PA0611" /db_xref="GeneID:879679" CDS complement(673191..673961) /gene="prtR" /locus_tag="PA0611" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="HTH-type transcriptional regulator PrtR" /protein_id="NP_249302.1" /db_xref="GeneID:879679" /translation="MDKSTQIPPDSFAARLKQAMAMRNLKQETLAEAAGVSQNTIHKL TSGKAQSTRKLIEIAAALGVSPVWLQTGEGAPAARSAVSVADGSPLVLEPLHPWDSDT PLDEDEVELPLYKEVEMSAGAGRTAVREIEGRKLRFSYATLRASGVDPSAAICAQLTG NSMEPLIMDGSTIGVDTATTHITDGEIYALEHDGMLRVKFVYRLPGGGIRLRSFNREE YPDEEYSPEDMRSRQISMIGWVFWWSTVRHRRGPSLVR" misc_feature complement(673713..673931) /gene="prtR" /locus_tag="PA0611" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" misc_feature complement(673236..673631) /gene="prtR" /locus_tag="PA0611" /note="Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains [Mobilome: prophages, transposons]; Region: COG2932" /db_xref="CDD:442176" gene 674419..674619 /gene="ptrB" /locus_tag="PA0612" /db_xref="GeneID:878190" CDS 674419..674619 /gene="ptrB" /locus_tag="PA0612" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="repressor PtrB" /protein_id="NP_249303.1" /db_xref="GeneID:878190" /translation="MADLADHANELVLARLDGLLAARPALAIRESAEDCEDCGEPIPQ ARRRAAPGCSRCIDCQDRHERR" misc_feature <674467..>674616 /gene="ptrB" /locus_tag="PA0612" /note="Prokaryotic dksA/traR C4-type zinc finger; Region: zf-dskA_traR; cl00755" /db_xref="CDD:445081" gene 674667..675026 /locus_tag="PA0613" /db_xref="GeneID:878382" CDS 674667..675026 /locus_tag="PA0613" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249304.1" /db_xref="GeneID:878382" /translation="MIKAIDEMLKLWAEEMHAPGSNGGGYAGGNLIAMLIASKGAVVR GHRGSRVILDRVAEVDRLVNRLPEELKNVVVEHYLNRDSFPEQKYRHCGCSRNTFYLR LHVAHQGIQDGLLRRVA" gene 675390..675839 /locus_tag="PA0614" /db_xref="GeneID:880722" CDS 675390..675839 /locus_tag="PA0614" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249305.1" /db_xref="GeneID:880722" /translation="MKHRNPALAPGFLLPGKTFVRTCPALPAKEGPMGNEPQTLTEMP LWVLILLAALGGVSGEMWRADKAGLGGWALLRRLALRSGASIVCGVAVMLLALACGAA LLFAAALGSLTAAAGAEIAVGLYERWAARRLGVCELPEEQSDDRGPH" misc_feature 675486..675824 /locus_tag="PA0614" /note="Bacteriophage holin Hol, superfamily III; Region: Phage_holin_3_5; pfam16085" /db_xref="CDD:318333" gene 675861..676376 /locus_tag="PA0615" /db_xref="GeneID:880902" CDS 675861..676376 /locus_tag="PA0615" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249306.1" /db_xref="GeneID:880902" /translation="MPEQAVTLEALYAAIEQVLRERLPEAQLIGFWPGVPENTPAVSL EIAELLPERDPGTGESALLCRLQARIMVPPGADRQAVSIACGIVRTLREQTWNLSLQP ARFVRSAVDGSREELKSLRVWLVEWTQSLRLGDPEWAWEDQPPGSLMLGFDPQTGPGH EPDYFAPEALA" gene 676373..676930 /locus_tag="PA0616" /db_xref="GeneID:877613" CDS 676373..676930 /locus_tag="PA0616" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249307.1" /db_xref="GeneID:877613" /translation="MSYVSAEHDRMLAAMILPCVVVAVDLAAARVRVRSGDWTSGWLR WHSLAAGKVRHWRAPSIGEQGVLLSPSGGVSMGTFIPGLYGDAGTAPDNSASSETWRF DDGASLSYDWAAHRYRVELPSGTVEVRVGASEVRVSDGAVSLKAPKISLEGPVEIAGT LTVSGDILGGGSIIDTAGNSNHHTH" misc_feature 676394..676927 /locus_tag="PA0616" /note="phage baseplate assembly protein V; Region: phage_P2_V; TIGR01644" /db_xref="CDD:273729" gene 677083..677409 /locus_tag="PA0617" /db_xref="GeneID:880757" CDS 677083..677409 /locus_tag="PA0617" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="bacteriophage protein" /protein_id="NP_249308.1" /db_xref="GeneID:880757" /translation="MIGMDRRSGLPLSGLAHLKQSVEDILTTPLGSRRMRPEYGSKLR RMVDMPVSEGWKSAVQAEVARSLGRWEPRIGLSAVRVVAVVDGRVDLLLSGVFEGENI NMEVSA" misc_feature 677086..677403 /locus_tag="PA0617" /note="Phage baseplate assembly protein W [Mobilome: prophages, transposons]; Region: COG3628" /db_xref="CDD:442846" gene 677406..678293 /locus_tag="PA0618" /db_xref="GeneID:879222" CDS 677406..678293 /locus_tag="PA0618" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="bacteriophage protein" /protein_id="NP_249309.1" /db_xref="GeneID:879222" /translation="MIIDLSQLPEPEVIENLDFETIYQELLGDFREAMAGEWTAEVES DPVLKLLQLAAYRELLLRARINDAARAVMLAYASGADLDQIGAGFNVQRLLIRPAQPE AVPPVEAQYESDKSLRNRIQLAFEQLSVAGPRNAYIAHALGADGRVADASATSPAPCE VLISVLGVEGNGQAPEAVLQAVRLALNAEDVRPVADRVTVRSAGIVPYQVKAQLYLFP GPEAELIRAAAEASLRDYISAQRRLGRDIRRSALFATLHVEGVQRVELQEPAADVVLD ETQAAYCTGYAITLGGVDE" misc_feature 677406..678290 /locus_tag="PA0618" /note="Phage-related baseplate assembly protein [Mobilome: prophages, transposons]; Region: COG3948" /db_xref="CDD:443148" gene 678286..678819 /locus_tag="PA0619" /db_xref="GeneID:878485" CDS 678286..678819 /locus_tag="PA0619" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="bacteriophage protein" /protein_id="NP_249310.1" /db_xref="GeneID:878485" /translation="MSSRLLPPNRSSLERSLGDVLPAELPVPLRELHDPARCEAALLP YLAWTRSVDRWDPDWSDEAKRNAVATSFVLHQRKGTLTALRQVVEPIGALSEVTEWWQ RSPTGVPGTFEITVDVSDRGIDEGTVLELERLLDDVRPVSRHLTRLDLRITPVIRSRH GLAVTDGDTLEIFPWKQ" misc_feature 678286..678744 /locus_tag="PA0619" /note="Bacteriophage P2-related tail formation protein [Mobilome: prophages, transposons]; Region: gpI; COG4385" /db_xref="CDD:443511" gene 678821..680896 /locus_tag="PA0620" /db_xref="GeneID:877993" CDS 678821..680896 /locus_tag="PA0620" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="bacteriophage protein" /protein_id="NP_249311.1" /db_xref="GeneID:877993" /translation="MTTNTPKYGGLLTDIGAAALATASAAGKKWQPTHMLIGDAGGAP GDTPDPLPSAAQKSLINQRHRAQLNRLFVSDKNANTLVAEVVLPVEVGGFWIREIGLQ DADGKFVAVSNCPPSYKAAMESGSARTQTIRVNIALSGLENVQLLIDNGIIYATQDWV KEKVAADFKGRKILAGNGLLGGGDLSADRSIGLAPSGVTAGSYRSVTVNANGVVTQGS NPTTLAGYAIGDAYTKADTDGKLAQKANKATTLAGYGITDALRVDGNAVSSSRLAAPR SLAASGDASWSVTFDGSANVSAPLSLSATGVAAGSYPKVTVDTKGRVTAGMALAATDI PGLDASKLVSGVLAEQRLPVFARGLATAVSNSSDPNTATVPLMLTNHANGPVAGRYFY IQSMFYPDQNGNASQIATSYNATSEMYVRVSYAANPSIREWLPWQRCDIGGSFTKEAD GELPGGVNLDSMVTSGWWSQSFTAQAASGANYPIVRAGLLHVYAASSNFIYQTYQAYD GESFYFRCRHSNTWFPWRRMWHGGDFNPSDYLLKSGFYWNALPGKPATFPPSAHNHDV GQLTSGILPLARGGVGSNTAAGARSTIGAGVPATASLGASGWWRDNDTGLIRQWGQVT CPADADASITFPIPFPTLCLGGYANQTSAFHPGTDASTGFRGATTTTAVIRNGYFAQA VLSWEAFGR" misc_feature 678830..679675 /locus_tag="PA0620" /note="Phage-related tail fiber protein [Mobilome: prophages, transposons]; Region: COG5301" /db_xref="CDD:444101" misc_feature 679898..680140 /locus_tag="PA0620" /note="knob domain of R1 and R2 pyocins and similar domains; Region: pyocin_knob; cd19958" /db_xref="CDD:410997" misc_feature order(679898..679900,679943..679945,679994..679996, 680000..680002,680006..680017,680036..680044, 680048..680056,680069..680074,680078..680086, 680090..680092,680120..680122,680129..680140) /locus_tag="PA0620" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:410997" misc_feature 680171..680407 /locus_tag="PA0620" /note="knob domain of R1 and R2 pyocins and similar domains; Region: pyocin_knob; cd19958" /db_xref="CDD:410997" misc_feature order(680213..680221,680225..680227,680285..680287, 680291..680293,680297..680308,680321..680329, 680333..680341,680351..680356,680360..680368, 680372..680374,680387..680389,680396..680407) /locus_tag="PA0620" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:410997" gene 680893..681351 /locus_tag="PA0621" /db_xref="GeneID:878615" CDS 680893..681351 /locus_tag="PA0621" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249312.1" /db_xref="GeneID:878615" /translation="MKGEYYFSPSQVAFYPASLREVYEYAGCWPVDGEWVSAELHEQL MNEQAAGRAISSDVNGNPVAIERPPLSRQQRSTHERRWRDSQLLATDGLVVRHRDQLE TGKETTLLPVQYHELMSYRASLRDWPEEPLFPDSGGRPSVPDWLRRYVTP" misc_feature 681130..681324 /locus_tag="PA0621" /note="Caudovirales tail fibre assembly protein, lambda gpK; Region: Caudo_TAP; cl17077" /db_xref="CDD:450149" gene 681394..682554 /locus_tag="PA0622" /db_xref="GeneID:877994" CDS 681394..682554 /locus_tag="PA0622" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="bacteriophage protein" /protein_id="NP_249313.1" /db_xref="GeneID:877994" /translation="MSFFHGVTVTNVDIGARTIALPASSVIGLCDVFTPGAQASAKPN VPVLLTSKKDAAAAFGIGSSIYLACEAIYNRAQAVIVAVGVETAETPEAQASAVIGGI SAAGERTGLQALLDGKSRFNAQPRLLVAPGHSAQQAVATAMDGLAEKLRAIAILDGPN STDEAAVAYAKNFGSKRLFMVDPGVQVWDSATNAARNAPASAYAAGLFAWTDAEYGFW SSPSNKEIKGVTGTSRPVEFLDGDETCRANLLNNANIATIIRDDGYRLWGNRTLSSDS KWAFVTRVRTMDLVMDAILAGHKWAVDRGITKTYVKDVTEGLRAFMRDLKNQGAVINF EVYADPDLNSASQLAQGKVYWNIRFTDVPPAENPNFRVEVTDQWLTEVLDVA" misc_feature 681400..682542 /locus_tag="PA0622" /note="Phage tail sheath protein subtilisin-like domain; Region: Phage_sheath_1; cl01389" /db_xref="CDD:470182" gene 682567..683070 /locus_tag="PA0623" /db_xref="GeneID:880639" CDS 682567..683070 /locus_tag="PA0623" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="bacteriophage protein" /protein_id="NP_249314.1" /db_xref="GeneID:880639" /translation="MIPQTLTNTNLFIDGVSFAGDVPSLTLPKLAVKTEQYRAGGMDA PVSIDMGLEAMEAKFSTNGARREALNFFGLADQSAFNGVFRGSFKGQKGASVPVVATL RGLLKEVDPGDWKAGEKAEFKYAVAVSYYKLEVDGREVYEIDPVNGVRAINGVDQLAG MRNDLGL" misc_feature 682567..683067 /locus_tag="PA0623" /note="phage contractile tail tube protein, P2 family; Region: tail_tube; TIGR01611" /db_xref="CDD:130672" gene 683085..683429 /locus_tag="PA0624" /db_xref="GeneID:877599" CDS 683085..683429 /locus_tag="PA0624" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249315.1" /db_xref="GeneID:877599" /translation="MTQENRLPGWLTLDADAALVRLSRPAQCNGVSVDTLTLRAPTVR DIRLAGKVAGDDAEERELQLFASLAQVSRQDLEGLKLSDYQRLQGAYFRLVQDDTDDT FAYASTGEAPGH" misc_feature 683142..683366 /locus_tag="PA0624" /note="Phage tail assembly chaperone proteins, E, or 41 or 14; Region: Phage_TAC_7; pfam10109" /db_xref="CDD:431061" gene 683599..685836 /locus_tag="PA0625" /db_xref="GeneID:880716" CDS 683599..685836 /locus_tag="PA0625" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249316.1" /db_xref="GeneID:880716" /translation="MSKDMDLVVSIGGIADPSLGKAFETVKARLDSLQERARQASSLR DVLGDAIRLERELADMRKVGDRGVAEHARQLGERQEQLKRLGIEARAAGDAYARLGEM QRGLDMQVRGLQRLEQASQAMPLASAFSGLVVEASKTAAGYQARLRDLSIRNGLDVGR EPALASLIQDSANQSGLGRTVTLDMLEHLNATGMGFAAAQMNLGLAGRFGFGQGIASA EVAGLVRALQLAQGSDSPEQLSATLDRLVVLGKGRVGSEALARRLPALLSALGNAGEA TAGDVGALGALLEIQAKNTTPDKADVRMKAWLEFVGSGSLKRAYGQDYDRDLEALRKD GASLLEANLELAARYRDKGGKLSAGVASPALEAYRASRGEFQGLLESQQSSVGSSERD AQRRKGMSQELWKASSDSWERAQTALGSALNPYLDNLAKGSAVLGESTAELLEAYPRT TAGLTAAAGAVLSGYLAYKGGRGAIDVLRGGRLGRRGTAAVGDLIERGAGRVSGGSEI QRVFVTNWPVPGGDSTLESARRPAQRKRGQTPRRKRGKGGGLKARSLPSLGFSAGGGL GAMAGKLPRLSRLPIRNAPLQVASSLIDVAEVYSSDLSESEKTVAYGEAGGSLAGSLA GAALGASIGSVVPVVGTLIGGLVGGAIGAWGGSELGGRLGRSLAGDPPAASDNKPAVA VPQAGPVAAAPNWTFAPQINLTVQGNVHEPQRLADELLPYLQRMLVDFADERQRRSLY DPAMV" misc_feature 683650..>684945 /locus_tag="PA0625" /note="Phage-related tail protein [Mobilome: prophages, transposons]; Region: COG5283" /db_xref="CDD:444094" misc_feature 685444..685578 /locus_tag="PA0625" /note="Glycine zipper; Region: Gly-zipper_Omp; pfam13488" /db_xref="CDD:463894" gene 685846..686718 /locus_tag="PA0626" /db_xref="GeneID:880740" CDS 685846..686718 /locus_tag="PA0626" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249317.1" /db_xref="GeneID:880740" /translation="MAYLEQLQAGLRYLGRAGESGRKSLDKVVAPVNGAISEIRGAAA ELENLPGVSPEMAARLQRAMRGIGQAQGKVNRVVSTYDRASRALLGIDERLDALKVQV NSAAQAVGKVAGDISPTLAGVLPSWLLAPSATPPSEAAASLPHLLVLQPLTANAQPFY FNLNTAAFDALQRNSAYNWSGQVRLGRRPALQSVGMGEESILLKGAVFPLRRQVGNQE KVVGLEQLEALRRLAERREPLILSSGYGEVQMGLWCLVRISENQSALLGNGAPRKQTF DLEFKRYGDDLPNR" misc_feature 686317..686712 /locus_tag="PA0626" /note="Phage protein U [Mobilome: prophages, transposons]; Region: COG3499" /db_xref="CDD:442722" gene 686693..686899 /locus_tag="PA0627" /db_xref="GeneID:878208" CDS 686693..686899 /locus_tag="PA0627" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249318.1" /db_xref="GeneID:878208" /translation="MATTCRTADGDMLDSLCYHVYGHLLGCVEATLDANPGLADEQQP FRAGLLISFPDMPVVNVEQVRLWD" misc_feature 686693..686896 /locus_tag="PA0627" /note="P2-like prophage tail protein X [Mobilome: prophages, transposons]; Region: gpX; COG5004" /db_xref="CDD:444028" gene 686957..687946 /locus_tag="PA0628" /db_xref="GeneID:877597" CDS 686957..687946 /locus_tag="PA0628" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249319.1" /db_xref="GeneID:877597" /translation="MQPSFRIVADGTDVTQRLNDRLLKLTLLDKPGMESDSLTLRIDD RDGQVALPRRGAVLEVHLGYAGEPLMRMGRFTVDTLQWAGPPDCLTVTAKAGDMRGSG KTIRSGGWEGTTLAQVCRDVGARNGWRVECPLQVAIARVDQVNESDYHFVTRLARQYD CTAKLAEGMLMVLPRQSGQSATGRRIEPLVLGRADVGSFDVTFDDRSLMRTVKTRYQL PGSGEVKSVELKNPKAPATAMGEHVDRHLYTSRGEAEQAAKARLASFSRSSASVRLEL PGRGDLFAERSLLLQGFKAGIDGEFLIDSVEHTYSSSGWTTVVQCNGGRGGKG" misc_feature 686957..687943 /locus_tag="PA0628" /note="Phage protein D [Mobilome: prophages, transposons]; Region: gpD; COG3500" /db_xref="CDD:442723" gene 687979..688608 /locus_tag="PA0629" /db_xref="GeneID:880762" CDS 687979..688608 /locus_tag="PA0629" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249320.1" /db_xref="GeneID:880762" /translation="MKLTEQQLLRIFPNARLVAGVFVVALQRAMDEREIDTPARRAAF LAQVGHESSQLTRLVENLNYSAQGLAATWPGRYLGPDGQPNALALRLARNPQAIADNT YATRNGNGDEASGDGWRFRGRGLLQITGRANYRLVGEALGEPLEAEPWRLEQPVPAAR SAAWWWAGHGLNELADRGEFAAITRRINGGLNGQAERLALWQRARAVLS" misc_feature 687979..688602 /locus_tag="PA0629" /note="Chitinase, GH19 family [Carbohydrate transport and metabolism]; Region: GH19; COG3179" /db_xref="CDD:442412" gene 688605..688967 /locus_tag="PA0630" /db_xref="GeneID:877664" CDS 688605..688967 /locus_tag="PA0630" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249321.1" /db_xref="GeneID:877664" /translation="MSRLALLLPAVLLVLLAGALLGGGLVARHYRPQLEEALGQLTAS RVASGQLEALLDEQQRALAAVRASAERRAKDVEQALGEARAQAAEQYAAAVRLLQEPD FGTDCQAAGAAIDRELGL" gene 688964..689221 /locus_tag="PA0631" /db_xref="GeneID:878295" CDS 688964..689221 /locus_tag="PA0631" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249322.1" /db_xref="GeneID:878295" /translation="MTRLLLGLCLLFAGCAASPTTPRPVRVEVPLAVPCRVPDVRPPS WAGATLKAGDSLQAKVRALLAERRQRQGYELELQAALRACR" gene 689537..690031 /locus_tag="PA0633" /db_xref="GeneID:878027" CDS 689537..690031 /locus_tag="PA0633" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249324.1" /db_xref="GeneID:878027" /translation="MSILTQGTQIYALVPPVSGTGAATVLEIEGVTSFNPGGNPADQI EDPCLSDTSRKYKKGLRTPGQATLGINADPRLASHVRLFQLSEKDGETSVKWAIGWSD GIDVKPTVSTEGDDFVLPPARTWFTFEGYVSDFPFDFASNTLVATQATIQRSGAGKWT PKSA" misc_feature 689609..690019 /locus_tag="PA0633" /note="Phage tail tube, TTP, lambda-like; Region: Phage_TTP_11; pfam16460" /db_xref="CDD:293069" gene 690043..690390 /locus_tag="PA0634" /db_xref="GeneID:878405" CDS 690043..690390 /locus_tag="PA0634" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249325.1" /db_xref="GeneID:878405" /translation="MNLNELRAAGGFIESALVRKEITWTRVPAGRKKAVSDTFQVFVR RNSFGAVERLFSAEGDQQSRNARYLAECIRLGETGEESLTYEQAYDLDPALGFLLLQA VGEVNRVEDAEKN" misc_feature 690052..690363 /locus_tag="PA0634" /note="Phage tail assembly chaperone, TAC; Region: Phage_TAC_13; pfam16459" /db_xref="CDD:406779" gene 690420..690674 /locus_tag="PA0635" /db_xref="GeneID:882071" CDS 690420..690674 /locus_tag="PA0635" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249326.1" /db_xref="GeneID:882071" /translation="MLNGVGGSTIAEAKERLSYAEYRAWVAYLNKRGSLHPGHRLELA LARIAALLGHALGADADPDAFRPHMALQPLSLHQAMDQWA" gene 690721..692556 /locus_tag="PA0636" /db_xref="GeneID:878378" CDS 690721..692556 /locus_tag="PA0636" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249327.1" /db_xref="GeneID:878378" /translation="MATNTDGSLTLDLVLRSEGYRAGMDKVGRINDQKMRAMEARAEK AGKAIGKSLDSSALIASSVLDQALDMLGRTSRQAGQAKKPVQSAQDKVLAEWKTRQKE LGEAWKSYREPLQDLSKLNEALLKNSSDKLDKALLNLSETGKLSLANVGKAAYADAAR LASRQMTLMLLDGLFGWVASVGTEKPKVDDKAGKGQAKAGDDEKEQPSLQSQVFKQWL LQMNSVWGAYRAPLQDISGMTDELFRNASEKLEKSLFNFATSGKLSLSNFAKTVIDDV ARIAARQLSMLALDGLFGWMNGKAGITEAQLASQKPYTSLLEKARAAAGQAAAGAPAA QGAAPMPAAAMDVGAMVATASGQTGDGSKVSAGGASAAGKPVGSWVEQMDASWASLRD QAQDVSGMMDMLFTNAFTNMENALFTFATTGKLSFKDFADSVIQDMARIAARQATLQI IGSIVGAVSGFFGSGATAGSRISDYTGSDMANWVSKQRAGGMPGFARGGAFNDGIQSA PALFSMAGGRPALIGERGPEAIMPLSRGSDGVLGVRALGGGEGGNVFNFSTSVSLGGG REGAATASGDDGTGQQLAGMINDAARNVVAQELRPGGLVWRMVNG" misc_feature 690724..692529 /locus_tag="PA0636" /note="Phage-related minor tail protein [Mobilome: prophages, transposons]; Region: COG5281" /db_xref="CDD:444092" misc_feature <691849..692367 /locus_tag="PA0636" /note="phage tail tape measure protein, lambda family; Region: tape_meas_lam_C; TIGR01541" /db_xref="CDD:273681" gene 692549..692890 /locus_tag="PA0637" /db_xref="GeneID:882114" CDS 692549..692890 /locus_tag="PA0637" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249328.1" /db_xref="GeneID:882114" /translation="MADLERFTWDISIDSAGQANQLVRQVQYGGGYSQALGDGLNNLS ETWQVSRTGDLALIGPIRDFLKRHGGYRSFLWTLPTGEPVRVRAQGWQLRPRGNGVFT LNTTFQQVFNP" misc_feature 692558..692887 /locus_tag="PA0637" /note="Phage tail protein [Mobilome: prophages, transposons]; Region: COG4718" /db_xref="CDD:443753" gene 692898..693593 /locus_tag="PA0638" /db_xref="GeneID:879225" CDS 692898..693593 /locus_tag="PA0638" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="bacteriophage protein" /protein_id="NP_249329.1" /db_xref="GeneID:879225" /translation="MTITADDQTLEPGALVRLFDLDCTGFGGEMLRFHGHLQQGPIHW QGNAYQAWPLEARGFEQRGDGRASSPTLSVGNIDGSISALCLFFDGLVGARLIVRETY AHYLDAANFAEGNPQADPSQERLNIWFLEQKTAENSVQVTWELSAPPDFQGQQIPARQ ITSLCHWCITNEYRGQDCNYTGTAMFDADGNPVDDPALDRCGGRVSDCKLRFGADNPL SHGGFAGAGLVRM" misc_feature 692898..693590 /locus_tag="PA0638" /note="Phage tail protein [Mobilome: prophages, transposons]; Region: gp18; COG4672" /db_xref="CDD:443709" gene 693596..694366 /locus_tag="PA0639" /db_xref="GeneID:880921" CDS 693596..694366 /locus_tag="PA0639" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249330.1" /db_xref="GeneID:880921" /translation="MELSRSLQRAIAAHAAREHPRECCGLIVRGVRQRRYVACRNAAG SPSEHFVIDHQDWCAAEDQGEVLAIVHSHPDVPATPSMADRVSCELHGLPWVILSWPE GDVAHLAPEGYRAPLLGREFAHGVLDCWSLCRDWYRREAGLELPDYPRRDGWWETGES LYEQHYAAAGFRPVPLAGIRRGDMLVMQVGRALHPNHAGIYLGNDWRLDSEPVQALGG DGPFLLHHLYGRLSTRDVFGGPWIERTRLVLRHTRMPQ" misc_feature 693611..693934 /locus_tag="PA0639" /note="Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains; Region: MPN_NLPC_P60; cd08073" /db_xref="CDD:163704" misc_feature order(693659..693661,693806..693808,693812..693814, 693836..693838,693845..693847) /locus_tag="PA0639" /note="MPN+ (JAMM) motif [active]" /db_xref="CDD:163704" misc_feature order(693806..693808,693812..693814,693845..693847) /locus_tag="PA0639" /note="Zinc-binding site [ion binding]; other site" /db_xref="CDD:163704" misc_feature 693950..694345 /locus_tag="PA0639" /note="NlpC/P60 family; Region: NLPC_P60; pfam00877" /db_xref="CDD:395705" gene 694421..695023 /locus_tag="PA0640" /db_xref="GeneID:880690" CDS 694421..695023 /locus_tag="PA0640" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="bacteriophage protein" /protein_id="NP_249331.1" /db_xref="GeneID:880690" /translation="MSDTLSQGLTTIRLYGVLGKRFGRMHGRLLESGTVREAMSALKH TMEGFETFMREAESKGLTFAVFRGRTNLSGEQLDMRGREDIRIVPLVIGSKQAGLFQT ILGAALIVVGGFTTFFSGGTSSFLVTAGVSMLAGGVMQMLSPQPKGLKGREAPENAPS YAFGGPVNTIAQGHPVGVLYGKRRIGGAVISAGIYAEDRL" misc_feature 694442..695017 /locus_tag="PA0640" /note="Phage-related protein, tail assembly protein I [Mobilome: prophages, transposons]; Region: COG4723" /db_xref="CDD:443758" gene 695082..698696 /locus_tag="PA0641" /db_xref="GeneID:878365" CDS 695082..698696 /locus_tag="PA0641" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="bacteriophage protein" /protein_id="NP_249332.1" /db_xref="GeneID:878365" /translation="MNKTITGHKGGSKKPRQPVEMPDSVRSIARAKILLALGEGEFDG GVDGRSIYLDDTPLLAADGSVNFPGVTWEFRPGSVDQEHIAGVPAVENELAVGVELKS DAPWVRAVNNTQLSAVRLRLSWPAIQRQQENGDVVGYRIDYAIDIAVDGGAWQEALKA SLDDKSTSRYERSHRVDLPEARSGWQVRVRRLTPNQNNNRVADTMRVEAITEVIDAKL RYPNTALLFVEFDASQFQSIPQISVEARGRRVRVPSNYDPQTRSYSGTWDGSFKSAWT SNPAWHWYDIVLHKRFGLGRRIDASMVDKWSLYRIAQYCDQSVPDGKGGQEPRFSCNL YLQSRAEAWTVLRDLAAIFRGMSYWSGAEMVAVSDMPEDEAYTFSPSNTVRGDDGSHF NYSSSRQRDRHTLALVNYDNPGNGYQSQPVAVNNDRAQRRYGISQLEITAIGCTSEGE AQRRGQWALLTEELEQDAVTFRTGMDGRGLAPGKIIAVADPVKSGKQIGGRLSAVDGR ALTLDRDVEARPGDRLLVNLPNGKAEARSVQSVVGRVLTVTAAYSETPRPQGQWALQS NSLTTQRFRIMSITRPEDNLFEITALQHNASKFDAIDNGARIELPPVTSIPPGVQAPP QNVRIKAFTKVDQGLAVTSLSASWDAAPNAVAYEAEWRKDSGNWVRVPRTSALGFDVP GIYAGRYLVRVRALNVMEVGSVYASSVETALEGKTTPPPALAYLRCVAGPWRIGLEWG FPTSGAADTAYTEIQQSATPGGSEETARALGLFAYPGNTHLVSPIPAGERLAFRGRLI DRSGNVGAWSNWVTGTSSSDASEYNQLITQEYVESALGQQFFSDIERMQVDIGGLQKQ VGDLADVLLYDPAKVYAKNDMVRQGQRLYQALKAVPAKTAPPNAAYWSDIGQSLETAN GLAQQVASHTAEISELDGSLTAQASRLGVLQAATRDDADDGNGAMADALRGWKTVARA AQEETVRATENEAQATRTTLLEARTADAEGRIATVERVATSDRQATAQRLDQLSASIG GTAASLQSEQTARANADSALAQRIDTVQARTDTNSAAIQTTSQAVTSLDGNVKAMYSV KLQAHANGQKYAAGWQLGFDSGTSVSTMAFQADRFIWFDSSSGTAVAPVSIVNGQMFI KNALIQDGAIDNAKIGNVIQSNAMSNNGMPIWRLDKAGTYTVRDSAGQVRVEMGLLQS " misc_feature 695751..698309 /locus_tag="PA0641" /note="Phage-related protein, tail protein J [Mobilome: prophages, transposons]; Region: COG4733" /db_xref="CDD:443767" misc_feature 698283..698501 /locus_tag="PA0641" /note="Domain of unknown function (DUF1983); Region: DUF1983; pfam09327" /db_xref="CDD:430529" gene 699744..700835 /locus_tag="PA0643" /db_xref="GeneID:880630" CDS 699744..700835 /locus_tag="PA0643" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249334.1" /db_xref="GeneID:880630" /translation="MAWHSKGSVSVTLNSEAVLGNATDFIANVRTGDAFRGPDGRWYE ITNVTSATVISIKPNYQGATASGQVYAVVPIHGYSKNLADQFRDINNQWGATLAGIKP WAVSSTGQQAQADMGISAVGRALNNASTPANALSYLGGVAPNQMGWAGNAMNTADLDS LTVSGLYAHGTAVPSPVNNAQGYVLHMQHGNPDFAVQQWYQLNSATGQYMRIKAGGNW SRWVLQYSQFNLVGLASFDASNNPSGAIIQRGGTVGFNEYVRYADGTQICWGNTTTNV GATMAYQPAGTLSFYITPVAYSWGFPVSFSRPPSVMVNPMRAAGNNASRPWGSTMSVT ETLFSWYGYDTASVASGMAASYVAMGRWN" misc_feature 700188..700418 /locus_tag="PA0643" /note="knob domain of R1 and R2 pyocins and similar domains; Region: pyocin_knob; cd19958" /db_xref="CDD:410997" misc_feature order(700188..700190,700233..700241,700290..700292, 700296..700298,700302..700313,700332..700340, 700344..700352,700362..700367,700371..700379, 700383..700385,700398..700400,700407..700418) /locus_tag="PA0643" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:410997" gene 700835..701170 /locus_tag="PA0644" /db_xref="GeneID:882154" CDS 700835..701170 /locus_tag="PA0644" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249335.1" /db_xref="GeneID:882154" /translation="MKLLLKPLLQQGITPDRERLSDVQVRGSVFILDGVEYDFGRMQP GGYLPPEAYHDTPFIDIRFVDGDRLYLHYIHQVTSEVMMQFPREIESIPVDQDGKVEV AFSYEHPMG" gene 701151..701381 /locus_tag="PA0645" /db_xref="GeneID:880676" CDS 701151..701381 /locus_tag="PA0645" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249336.1" /db_xref="GeneID:880676" /translation="MNIQWDKYVSPAKAAADVRDQALASVQAKRLLAYREESNPLKTE AEFDAIKAGVEPDYGAWIAKVEEIKSRYPMPE" gene 701477..702529 /locus_tag="PA0646" /db_xref="GeneID:879880" CDS 701477..702529 /locus_tag="PA0646" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249337.1" /db_xref="GeneID:879880" /translation="MPWYSTGTVSVVLNSDTVTGSGTAFSANARAGDAFRGPDGRWYE IGNVASATVLTIKPAYQGATANGQAYSITPVQGYSKTLADQFRDLSNQWGSLLAAVKP WAIASTGSQAQADMGITEVGRAINGASTVGNALGFLGGVSKTQAPMALDMDTVNESGW FSITPNTYNVPLGNNNISGVNGHVALSMVFDASTRYQLFFVRNTNLPEVWYRSCTNGT WKEWVRFYTTDNIVGSVTRRLVTGKPTGAVMESGTTSNGWYVRFADGTQMAAARSEPG LSFGANVIQLPAAFVTGFNTGVTCNWIPSSGWPATAGQGVRGAYLNGSSSVSFATAQA LGANDTITVMAVGRWY" misc_feature 701927..702154 /locus_tag="PA0646" /note="knob domain of R1 and R2 pyocins and similar domains; Region: pyocin_knob; cd19958" /db_xref="CDD:410997" misc_feature order(701948..701956,701960..701962,702023..702025, 702032..702034,702038..702049,702062..702070, 702074..702082,702098..702103,702107..702115, 702119..702121,702134..702136,702143..702154) /locus_tag="PA0646" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:410997" gene 702529..702831 /locus_tag="PA0647" /db_xref="GeneID:880633" CDS 702529..702831 /locus_tag="PA0647" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249338.1" /db_xref="GeneID:880633" /translation="MRIELSPVVVLPEDSTDMDVMVSGDSIAVSGVMYDFSQLPEGGY LPASAIHEGPFSGRVTRAGGEICLTLVFPIRGSYSEAAKFPVPIHIVEDGTVELPK" gene 702828..703058 /locus_tag="PA0648" /db_xref="GeneID:879680" CDS 702828..703058 /locus_tag="PA0648" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249339.1" /db_xref="GeneID:879680" /translation="MIDWKMMKTPDQVSRERVQQEYDAVLARRAEAYRLESDPIKTEV EFDSIRAGVETDYSAWLAKVEEIKARYPLPRI" gene 703477..704082 /gene="trpG" /locus_tag="PA0649" /db_xref="GeneID:878400" CDS 703477..704082 /gene="trpG" /locus_tag="PA0649" /EC_number="4.1.3.27" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="anthranilate synthase component II" /protein_id="NP_249340.1" /db_xref="GeneID:878400" /translation="MLLMIDNYDSFTYNLVQYFGELKAEVKVVRNDELSVEQIEALAP ERIVLSPGPCTPNEAGVSLAVIERFAGKLPLLGVCLGHQSIGQAFGGEVVRARQVMHG KTSPIHHKDLGVFAGLANPLTVTRYHSLVVKRESLPECLEVTAWTQHADGSLDEIMGV RHKTLNVEGVQFHPESILTEQGHELLANFLRQQGGVRGEGN" misc_feature 703477..704052 /gene="trpG" /locus_tag="PA0649" /note="anthranilate synthase component II; Provisional; Region: PRK05670" /db_xref="CDD:235552" misc_feature order(703627..703632,703636..703638,703711..703716, 703723..703725,703855..703866) /gene="trpG" /locus_tag="PA0649" /note="glutamine binding [chemical binding]; other site" /db_xref="CDD:153214" misc_feature order(703711..703713,703993..703995,703999..704001) /gene="trpG" /locus_tag="PA0649" /note="catalytic triad [active]" /db_xref="CDD:153214" protein_bind 703678..703690 /gene="trpG" /locus_tag="PA0649" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(703683..703695) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 703712..703724 /gene="trpG" /locus_tag="PA0649" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 704084..705133 /gene="trpD" /locus_tag="PA0650" /db_xref="GeneID:880665" CDS 704084..705133 /gene="trpD" /locus_tag="PA0650" /EC_number="2.4.2.18" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="anthranilate phosphoribosyltransferase" /protein_id="NP_249341.1" /db_xref="GeneID:880665" /translation="MDIKGALNRIVNQLDLTTEEMQAVMRQIMTGQCTDAQIGAFLMG MRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVA AAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVGFMFAQVHHKA MKYAAGPRRELGLRTLFNMLGPLTNPAGVRHQVVGVFTQELCKPLAEVLKRLGSEHVL VVHSRDGLDEFSLAAATHIAELKDGEVREYEVRPEDFGIKSQTLMGLEVDSPQASLEL IRDALGRRKTEAGQKAAELIVMNAGPALYAADLATSLHEGIQLAHDALHTGLAREKMD ELVAFTAVYREENAQ" misc_feature 704084..705103 /gene="trpD" /locus_tag="PA0650" /note="anthranilate phosphoribosyltransferase; Provisional; Region: trpD; PRK00188" /db_xref="CDD:234682" gene 705130..705966 /gene="trpC" /locus_tag="PA0651" /db_xref="GeneID:882120" CDS 705130..705966 /gene="trpC" /locus_tag="PA0651" /EC_number="4.1.1.48" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="indole-3-glycerol phosphate synthase" /protein_id="NP_249342.1" /db_xref="GeneID:882120" /translation="MSVPTVLQKILARKAEEVAERRARVNLAEVERLARSADAPRGFA NALLERAKRKEPAVIAEIKKASPSKGVLREHFVPAEIARSYEAGGAACLSVLTDVDFF QGADAYLKEARAACALPVIRKDFMIDPYQIVEARAIGADCILLIVSALDDVLMAELAA TAKSVGLDVLVEVHDGTELERALKTLDTPLVGINNRNLHTFEVSLETTLDLLPEIPRD RLVVTESGILNRADVELMEVSEVYAFLVGEAFMRADDPGLELKRLFFQERGAVVLGAD PD" misc_feature 705136..705930 /gene="trpC" /locus_tag="PA0651" /note="indole-3-glycerol phosphate synthase TrpC; Region: trpC; PRK00278" /db_xref="CDD:234710" misc_feature order(705310..705312,705316..705318,705325..705333, 705433..705435,705496..705498,705502..705504, 705565..705567,705643..705645,705709..705711, 705715..705717,705721..705723,705802..705807, 705868..705873) /gene="trpC" /locus_tag="PA0651" /note="active site" /db_xref="CDD:238203" misc_feature order(705310..705312,705316..705318,705496..705498, 705643..705645,705709..705711) /gene="trpC" /locus_tag="PA0651" /note="ribulose/triose binding site [chemical binding]; other site" /db_xref="CDD:238203" misc_feature order(705316..705318,705805..705807,705868..705873) /gene="trpC" /locus_tag="PA0651" /note="phosphate binding site [ion binding]; other site" /db_xref="CDD:238203" misc_feature order(705328..705330,705433..705435,705715..705717, 705721..705723) /gene="trpC" /locus_tag="PA0651" /note="substrate (anthranilate) binding pocket [chemical binding]; other site" /db_xref="CDD:238203" misc_feature order(705433..705435,705496..705498,705502..705504, 705565..705567,705721..705723) /gene="trpC" /locus_tag="PA0651" /note="product (indole) binding pocket [chemical binding]; other site" /db_xref="CDD:238203" gene complement(706028..706672) /gene="vfr" /locus_tag="PA0652" /db_xref="GeneID:880744" CDS complement(706028..706672) /gene="vfr" /locus_tag="PA0652" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="cAMP-regulatory protein" /protein_id="NP_249343.1" /db_xref="GeneID:880744" /translation="MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFI IKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEI SYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPD AMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR" misc_feature complement(706031..706672) /gene="vfr" /locus_tag="PA0652" /note="cAMP-activated global transcriptional regulator CRP; Region: PRK11753" /db_xref="CDD:236969" protein_bind complement(706860..706891) /experiment="Beta-gal reporter assay [PMID: 20494996]" /experiment="DNAse footprinting [PMID: 20494996]" /experiment="EMSA [PMID: 20494996]" /experiment="In-vitro transcription [PMID: 20494996]" /note="Transcription factor binding site for NP_249343. Originally reported in Pseudomonas aeruginosa PAK; Evidence of regulation for: PA0652" /bound_moiety="Vfr" gene 706944..707366 /locus_tag="PA0653" /db_xref="GeneID:879759" CDS 706944..707366 /locus_tag="PA0653" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249344.1" /db_xref="GeneID:879759" /translation="MKARIQWAGEAMFLGESGSGHVVVMDGPPDHGGRNLGVRPMEMV LIGLGGCTNFDVVSILKKARQPVESCEAFLEAERADEEPKVFTKIHVHFVVKGRGLKE AQVKRAVELSAEKYCSASIMLGRGGVEITHDYEIVELG" misc_feature 706944..707360 /locus_tag="PA0653" /note="OsmC family protein; Region: PRK10738; cl00767" /db_xref="CDD:469912" gene 707686..708480 /gene="speD" /locus_tag="PA0654" /db_xref="GeneID:878446" CDS 707686..708480 /gene="speD" /locus_tag="PA0654" /EC_number="4.1.1.50" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine decarboxylase" /protein_id="NP_249345.1" /db_xref="GeneID:878446" /translation="MKSKLKLHGFNNLTKTLSFNIYDICYAETPEDLQAYVQYIDEEY DAERLTQILTDVVDIIGANILNIARQDYDPQGASVTILISEQPVTPTDSQIEESPGPL PDTILAHLDKSHITVHTYPEIHPVDGIATFRVDIDVSTCGVISPLKALNYLIHQFDSD IVTVDYRVRGFTRDIEGRKHFIDHEINSIQNYLSDDTREAYQMTDVNVYQENLFHTKM LLKDFELENYLFGDATRTLSAEQREQVTERLKHEMLEIFYARNMPR" misc_feature 707686..708477 /gene="speD" /locus_tag="PA0654" /note="adenosylmethionine decarboxylase; Region: PRK05462" /db_xref="CDD:235480" gene complement(708535..709182) /locus_tag="PA0655" /db_xref="GeneID:880759" CDS complement(708535..709182) /locus_tag="PA0655" /codon_start=1 /transl_table=11 /product="2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase" /protein_id="NP_249346.1" /db_xref="GeneID:880759" /translation="MSADRHYSPIDRFLLQADSALRTLLPFSGQPARPSPAIVEPDGE LSEEDTRHIAGLMRINHTGEVCAQALYQGQSLTAKLPEVREAMEEAAEEEIDHLAWCE QRIRQLGSRPSVLNPIFYGLSFGVGAAAGLVSDRVSLGFVAATEDQVCKHLDEHLAQI PQEDRKSRAILEQMRIDEEQHSSNALAAGGLRFPAPVKLGMSLLAKVMTKSTYRI" misc_feature complement(708538..709152) /locus_tag="PA0655" /note="2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase; Region: DMQ_monoox_COQ7; NF033656" /db_xref="CDD:468131" gene complement(709282..709620) /locus_tag="PA0656" /db_xref="GeneID:881980" CDS complement(709282..709620) /locus_tag="PA0656" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="HIT family protein" /protein_id="NP_249347.1" /db_xref="GeneID:881980" /translation="MDCLFCKIVAGEVPARKFYEDEEVVAFHDIGPQAPVHFLVIPKR HIPTLEHLTEADRPLAGHILFTAQRLAREQGCEEGFRVVMNCNDLGGQTVHHIHMHVL GQRQMHWPPG" misc_feature complement(709312..709617) /locus_tag="PA0656" /note="Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a...; Region: PKCI_related; cd01276" /db_xref="CDD:238607" misc_feature complement(order(709321..709323,709327..709329, 709339..709341,709345..709347,709366..709368, 709504..709506,709510..709512,709531..709536, 709540..709542)) /locus_tag="PA0656" /note="nucleotide binding site/active site [active]" /db_xref="CDD:238607" misc_feature complement(order(709315..709323,709327..709329, 709333..709335)) /locus_tag="PA0656" /note="HIT family signature motif [active]" /db_xref="CDD:238607" misc_feature complement(709327..709329) /locus_tag="PA0656" /note="catalytic residue [active]" /db_xref="CDD:238607" gene 709699..711180 /locus_tag="PA0657" /db_xref="GeneID:878397" CDS 709699..711180 /locus_tag="PA0657" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ATPase" /protein_id="NP_249348.1" /db_xref="GeneID:878397" /translation="MKNDIHDLGLVLDSRVKLILIESWDEPKVMETLTGLAVRRGLGL YAWSVTEGVQRLGFGGEPLGGEESRDPVAALRLIKHDQQANLYVLCDLHPFLGDSPTL VRLLKEIAMAEGNHRPTVVLVSHALKLPAEVQRFAARFSLSLPSEDELLGIVREEATR WSERNRGARVRTDNRTLQQVVKNLRGLSHAEARLLARNVICNDGAITQEDLPELNRTK FQLLDLEGVLSFEYDTARFAEVGGLAALKRWLGERQSAFLAGKPGDQPKGMMLVGVQG AGKSLAAKAVAGLWGLPLLRLDFACLYNKYFGETERNLREALRLAEQMAPCVLWMDEV EKGISGGDQDNGVSQRVLGTLLTWMAEREAPVFMVATANAIDRLPPELIRKGRFDELF FVDLPTPEVRAEIFRIHLQRRELEPAQFDLHLLAAASEGFSGAEIEQAVVAALYAGQA RQQAVDQDLLLRELARTSPLSVLMAEKLAALRTWAKGRAVPAD" misc_feature 709711..711174 /locus_tag="PA0657" /note="Ycf46; Provisional; Region: ycf46; CHL00195" /db_xref="CDD:177094" gene complement(711220..712020) /locus_tag="PA0658" /db_xref="GeneID:880695" CDS complement(711220..712020) /locus_tag="PA0658" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_249349.1" /db_xref="GeneID:880695" /translation="MPRYALITGASSGIGLALAEALARRGRALILVARQRDALESIAY ELAQRFGVEVLFRTCDLSEPLQLSGLLHELEQGERQIDLLVNNAGIGTSGPFIDQEWA REQELIELNILALARLCHSLGARMAAQGGGQILNIASVAAFQPGAWMSNYYASKAYVL HFSEGLREELKERGVKVSVLCPGPTRTAFFREAGMRLGRLDRSKLMMTPEEVALLALR GLDKNRALIVPGWRNRLLALSPRLAPRWLVRRLAARINASAVPSAPRG" misc_feature complement(711256..712020) /locus_tag="PA0658" /note="Short-chain dehydrogenase [General function prediction only]; Region: YqjQ; COG0300" /db_xref="CDD:440069" gene complement(712081..713157) /locus_tag="PA0659" /db_xref="GeneID:880846" CDS complement(712081..713157) /locus_tag="PA0659" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249350.1" /db_xref="GeneID:880846" /translation="MTDQRFKIVFSGELMPDASLETVKDNLARLFKSEPGKIDALFGG RPVVLKRELPEAEAERYLTALRQAGANAYKEVDLAASLSLVETPDHNPQVAEETPAQD LPPMTCPKCGHEQPSGAECSACGVIIEKYLARQAQLGENAAPAATAAAGASPYTPPSA QVGDTLPEFGELNVFTTNGRIGRLRYLGWSMAMTLCFLVIMGLGFLLGETVGVAVTAL ASIAFIVIAVMIGVQRLHDLGWSGWLWLLNFVPFVGSVFGILMLVLPGSTGANRYGPP PPANSTGVKVLASLIILLPIVGIIAAIALPSYQGYLERANYDGGASAPADPYTTDEQA AAAAAEADEAATAAAEAMEDDDQQ" misc_feature complement(712783..712836) /locus_tag="PA0659" /note="zinc-ribbon domain; Region: zinc_ribbon_2; pfam13240" /db_xref="CDD:433054" misc_feature complement(712321..712641) /locus_tag="PA0659" /note="Uncharacterized membrane protein YhaH, DUF805 family [Function unknown]; Region: yhaH; COG3152" /db_xref="CDD:442386" misc_feature complement(<712213..712299) /locus_tag="PA0659" /note="Type IV pilus assembly protein, major pilin PilA [Cell motility, Extracellular structures]; Region: PilA; COG4969" /db_xref="CDD:443995" gene complement(713279..714247) /locus_tag="PA0660" /db_xref="GeneID:879220" CDS complement(713279..714247) /locus_tag="PA0660" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249351.1" /db_xref="GeneID:879220" /translation="MSLPALLDQRLRLPMVAAPMFLVSNPQLVLACCRSGIVGSFPAL NQRESSGFEGWLEEIGAGLQALDNPAPYAVNLIVHNTNPRLQADLRICVEHRVPIVIT SLGAVREVVDAVHSYGGLVFHDVTTRRHAEKAAEAGVDGLIAVAAGAGGHAGTWSPFA LVAEIRQFFDKTLLLAGCINHGHEILAAQMLGADLAYLGTRFIATRESNASDAYKQMI LEARAADIVHTPAVSGVPASFMRQSLEAAGYDLKRLTDKADMNYGEKLKPVNDEAKAW KTVWSAGQGAGNIDDLPGVDELVARLDREYRDALRNMDSLANRWPR" misc_feature complement(713315..714220) /locus_tag="PA0660" /note="NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family [General function prediction only]; Region: YrpB; COG2070" /db_xref="CDD:441673" gene complement(714264..714686) /locus_tag="PA0661" /db_xref="GeneID:882163" CDS complement(714264..714686) /locus_tag="PA0661" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249352.1" /db_xref="GeneID:882163" /translation="MYMWLKAFHIIAVVCWFAGLFYLPRLFVYHAMSEDQTSRERFCV MERKLYRGIMMPSMLATLVLGLWMLYLTPGWLSQGWLHAKLTLVVLLIGYHHACGAML KRFARGEPGRSHVFYRWFNEVPVLFLLLIVLLVVLKPF" misc_feature complement(714321..714686) /locus_tag="PA0661" /note="Protoporphyrinogen oxidase HemJ (unrelated to HemG or HemY) [Coenzyme transport and metabolism]; Region: HemJ; COG1981" /db_xref="CDD:441584" gene 714977..716011 /gene="argC" /locus_tag="PA0662" /db_xref="GeneID:882004" CDS 714977..716011 /gene="argC" /locus_tag="PA0662" /EC_number="1.2.1.38" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="N-acetyl-gamma-glutamyl-phosphate reductase" /protein_id="NP_249353.1" /db_xref="GeneID:882004" /translation="MIKVGIVGGTGYTGVELLRLLAQHPQARVEVITSRSEAGVKVAD MYPNLRGHYDDLQFSVPDAQRLGACDVVFFATPHGVAHALAGELLDAGTRVIDLSADF RLADAEEWARWYGQPHGAPALLDEAVYGLPEVNREKIRQARLIAVPGCYPTATQLGLI PLLEAGLADASRLIADCKSGVSGAGRGAKVGSLFCEAGESMMAYAVKGHRHLPEISQG LRRASGGDVGLTFVPHLTPMIRGIHATLYAHVADRSVDLQALFEKRYADEPFVDVMPA GSHPETRSVRGANVCRIAVHRPQGGDLVVVLSVIDNLVKGASGQALQNMNILFGLDER LGLSHAALLP" misc_feature 714980..716008 /gene="argC" /locus_tag="PA0662" /note="N-acetyl-gamma-glutamylphosphate reductase [Amino acid transport and metabolism]; Region: ArgC; COG0002" /db_xref="CDD:439773" gene 716011..716730 /locus_tag="PA0663" /db_xref="GeneID:880770" CDS 716011..716730 /locus_tag="PA0663" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249354.1" /db_xref="GeneID:880770" /translation="MSGWELQFRDPRRAWLVRLGVGALLLAVPLAFLGGRWSTGADAA RSEADAQRQETLIGEQKAELERLRTEIEVLRSGERLSQQATEQSRQTIKLLEDQVFKQ QQDIAFYKGVVAPASKADALEIRAFEVQGTDDPQRFRYKVMLSRLGRDDRKLDGRLKV RISGKLARKDATYDLEQLSPELGKTGLSISLRHFQSIPEGGRFAELELPKNFIPKLID VRAELNGQSKPLQRRFDWPKQ" misc_feature 716209..716667 /locus_tag="PA0663" /note="Family of unknown function (DUF6776); Region: DUF6776; pfam20567" /db_xref="CDD:466716" gene 716731..717153 /locus_tag="PA0664" /db_xref="GeneID:880642" CDS 716731..717153 /locus_tag="PA0664" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249355.1" /db_xref="GeneID:880642" /translation="MSIMWSKNKGRADVQRFTGQTSLIASGAELVGDMNLKGAVQIDG TVRGALQAHEGLVRVSAGGRVDGEIRAPHVIIDGQVDGDIHAIERLELGAQARVKGNL HYGLIETAMGAQIEGRLCPMTEASPRPLELPASVETVD" misc_feature 716740..717111 /locus_tag="PA0664" /note="Cytoskeletal protein CcmA, bactofilin family [Cytoskeleton]; Region: CcmA; COG1664" /db_xref="CDD:441270" gene 717231..717581 /locus_tag="PA0665" /db_xref="GeneID:879482" CDS 717231..717581 /locus_tag="PA0665" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster insertion protein ErpA" /protein_id="NP_249356.1" /db_xref="GeneID:879482" /translation="MSIETFTPTPLLFTPGAANKVKTLIDEEGNPRLKLRVFVTGGGC SGFQYGFTFDEDIADDDTVIERDGVGLVVDPMSFQYLAGSEVDYQEGLEGSRFVIKNP NAATTCGCGQSFSI" misc_feature 717249..717578 /locus_tag="PA0665" /note="iron-sulfur cluster insertion protein ErpA; Provisional; Region: PRK13623" /db_xref="CDD:184186" gene complement(717635..718726) /locus_tag="PA0666" /db_xref="GeneID:882072" CDS complement(717635..718726) /locus_tag="PA0666" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="anhydro-N-acetylmuramic acid kinase" /protein_id="NP_249357.1" /db_xref="GeneID:882072" /translation="MPRYLGLMSGTSLDGMDIVLIEQGDRTTLLASHYLPMPAGLRED ILALCVPGPDEIARAAEVEQRWVALAAQGVRELLLQQQMSPDEVRAIGSHGQTIRHEP ARHFTVQIGNPALLAELTGIDVVADFRRRDVAAGGQGAPLVPAFHQALFGDDDTSRAV LNIGGFSNVSLLSPGKPVRGFDCGPGNVLMDAWIHHQRGEHFDRDGAWAASGQVNHAL LASLLADEFFAARGPKSTGRERFNLPWLQEHLARHPALPAADIQATLLELSARSISES LLDAQPDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLA HRFLERLPGNCPDVTGALGPRTLGALYPA" misc_feature complement(717638..718723) /locus_tag="PA0666" /note="Anhydro-N-acetylmuramic acid kinase; Region: AnmK; pfam03702" /db_xref="CDD:397660" gene complement(718729..720072) /locus_tag="PA0667" /db_xref="GeneID:878797" CDS complement(718729..720072) /locus_tag="PA0667" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249358.1" /db_xref="GeneID:878797" /translation="MFPSSEVEAKRTTLNLELESNTDRLLQEKDDLLPQSVTNSSDEG TPFAQVEGASDDNTAEQDSDKPGASVADADTKPVDPEWKTITVASGDTLSTVFTKAGL STSAMHDMLTSSKDAKRFTHLKVGQEVKLKLDPKGELQALRVKQSELETIGLDKTDKG YSFKREKAQIDLHTAYAHGRITSSLFVAGRNAGLPYNLVTSLSNIFGYDIDFALDLRE GDEFDVIYEQHKVNGKQVATGNILAARFVNRGKTYTAVRYTNKQGNTSYYRADGSSMR KAFIRTPVDFARISSRFSLGRRHPILNKIRAHKGVDYAAPIGTPIKATGDGKILEAGR KGGYGNAVVIQHGQRYRTIYGHMSRFAKGIRAGTSVKQGQIIGYVGMTGLATGPHLHY EFQINGRHVDPLSAKLPMADPLGGADRKRFMAQTQPMIARMDQEKKTLLALNKQR" misc_feature complement(718783..720054) /locus_tag="PA0667" /note="putative peptidase; Provisional; Region: PRK11649" /db_xref="CDD:236946" gene 720357..721556 /gene="tyrZ" /locus_tag="PA0668" /db_xref="GeneID:880817" CDS 720357..721556 /gene="tyrZ" /locus_tag="PA0668" /EC_number="6.1.1.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tyrosine--tRNA ligase" /protein_id="NP_249359.1" /db_xref="GeneID:880817" /translation="MKSVEEQLALIQRGADEILVEAELVAKLKRGQPLRIKAGFDPTA PDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSVTRPPLTREQVLENAE TYKSQVFKILDPAKTEVAFNSTWMDQLTPADFIRLASQYTVARMLERDDFSKRYASNQ PIAIHEFLYPLVQGYDSVALKADVELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLL EGLDGVKKMSKSLGNYIGIQEAPGVMYSKLVSIPDTLMWRYFELLSFRSLDEIDSFRK DVEAGANPRDIKIKLAEEIVARFHGEEAAASAHKSAGNRLKEGELPEDLPEIELSSPE DMPVASVLNKAGLVKNAAAARDLLGAGSVKVDGQVVDRTFMLALGETRVFQAGKKAFA RITLKAE" misc_feature 720375..721547 /gene="tyrZ" /locus_tag="PA0668" /note="Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: TyrS; COG0162" /db_xref="CDD:439932" gene 722096..723631 /locus_tag="PA0668.1" /db_xref="GeneID:3240252" rRNA 722096..723631 /locus_tag="PA0668.1" /product="16S ribosomal RNA" /db_xref="GeneID:3240252" gene 723696..723772 /locus_tag="PA0668.2" /db_xref="GeneID:3240247" tRNA 723696..723772 /locus_tag="PA0668.2" /product="tRNA-Ile" /db_xref="GeneID:3240247" gene 723801..723876 /locus_tag="PA0668.3" /db_xref="GeneID:3240236" tRNA 723801..723876 /locus_tag="PA0668.3" /product="tRNA-Ala" /db_xref="GeneID:3240236" gene 724103..726993 /locus_tag="PA0668.4" /db_xref="GeneID:3240215" rRNA 724103..726993 /locus_tag="PA0668.4" /product="23S ribosomal RNA" /db_xref="GeneID:3240215" gene 727136..727255 /locus_tag="PA0668.5" /db_xref="GeneID:3240249" rRNA 727136..727255 /locus_tag="PA0668.5" /product="5S ribosomal RNA" /db_xref="GeneID:3240249" gene complement(727608..730703) /locus_tag="PA0669" /db_xref="GeneID:880686" CDS complement(727608..730703) /locus_tag="PA0669" /EC_number="2.7.7.7" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="error-prone DNA polymerase" /protein_id="NP_249360.3" /db_xref="GeneID:880686" /translation="MAAWLVRMSAYAELHCLSNFSFQRGASSATELFARAARLGYRAL AITDECSLAGIVRAWQAAREHQVQLIVGSEIRLEQGPKLVLLAEDLEGYQNLCRLITR GRRQADKGHYRLLREDLQQPLAGLLAIWLPNDHGDEQAAWLRERFPQRLWLGVELHRG ADDDARLDKLLALASHLRLPPVACGDVHMHARGRRALQDCMTAIRNHLPVSEAGAYLF PNGERHLRTLEALQGIYPQALLAETLKIAERCRFDLEQLKYQYPRELVPAGHDPASWL RHLTEQGIARRWPNGASAKVRKQIERELELIAELGYESYFLTVQDIVAFARGRKILCQ GRGSAANSAVCFALGITELDPDRTNLLFERFLSRERNEPPDIDVDFEHERREEVIQYV FTRYGRQRAALTAVVSTYHGAGAVRDVAKALGLPPEQVDVLANCCGRWSDQAPSAERL EEAGFDPQSPILRRVLALTDELIGFPRHLSQHPGGFVISEQPLDTLVPVENASMAERT VIQWDKDDLDAVGLLKVDVLALGMLSALRRSFDLIHALRGGKRLSIASIPSEDPATYE MISRADTIGVFQIESRAQMAMLPRLRPQKFYDLVIQVAIVRPGPIQGDMVHPYLRRRN GEEPVAYPSAELEEVFERTLGVPLFQEQVMELAIVAADYTPGEADELRRSMAAWKRHG GLEHHRERLTRGMLAKGYEADFAARIFEQIKGFGSYGFPESHAASFALLTYASSWLKR HEPAAFACALINSWPMGFYSPDQLLQDARRHALQTRPVDVRHSGWDCSLESFGQAQPA IRLGLRMIRGFREEDARRIEQVREAEPFLDVHDLGRRARLDARALELLADAGALRGLA GHRHKARWAVASVEPQLPLFAEGTAIEESTVSLPLPSRGEELLSDYALLGTTLGPHPL KLLRGQLKARRCRDSRELAKLGHGRPIRVAGLVVGRQRPQTASGITFITLEDEFGMVN VVVRHDLAERQRRPFLESRLLQVEGILESSGEVRHVIAGRLHDLTPLLTGLDVRSRDF H" misc_feature complement(727611..730682) /locus_tag="PA0669" /note="error-prone DNA polymerase; Validated; Region: dnaE2; PRK05672" /db_xref="CDD:235553" gene complement(730679..732094) /locus_tag="PA0670" /db_xref="GeneID:880683" CDS complement(730679..732094) /locus_tag="PA0670" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249361.1" /db_xref="GeneID:880683" /translation="MLWACILLPQLAMDSALRQRNNPDAPLALLGGPAQRRQLQAVNP AARALGLRPGQSLIAAQALSRDFATAEYDLAAVERWQAFLAAWAYGFSSQVSLHYPRA LLLEVQSSLALFGPWPRFEARLRKELTALGFRHRLCLAPNPVAARVLANSHDGLAIED ETALQRQLSALPLDRLGLSRELAVALGRMGLRYLRQVLELPRAALARRFPAELLLHID RLCGRSPLALEHYRPPDTFDLRIELNFDVESHQALLFPLRRLSADLAAFLAGRDSGVQ RFTLHLEHHGRADSQVTVGLLSAEREAAMLFELTRGRLEQLQLPAPVHAVRLEARELP PFTPQHRELFDERPQQYLGWEQLRERLRARLGDEAVQGLSAVAEHRPERSWRPHSCDR AQSPAACGLRPGWLLAEPRPLGEALPTVLAGPERIESGWWDGEDIRRDYYLVETRSGQ RAWVYREVGSEGPLWLHGWFA" misc_feature complement(731105..732082) /locus_tag="PA0670" /note="DNA Polymerase Y-family; Region: PolY_like; cd03468" /db_xref="CDD:176458" misc_feature complement(order(731633..731635,731789..731794, 731954..731956,731963..731965,732059..732064, 732071..732076)) /locus_tag="PA0670" /note="active site" /db_xref="CDD:176458" misc_feature complement(order(731186..731188,731192..731206, 731282..731284,731369..731386,731462..731464, 731549..731569,731789..731791,731798..731800)) /locus_tag="PA0670" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:176458" gene complement(732102..732653) /locus_tag="PA0671" /db_xref="GeneID:880694" CDS complement(732102..732653) /locus_tag="PA0671" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249362.1" /db_xref="GeneID:880694" /translation="MPAGASLPTGHARLDALLPGGGWPEHALSEILHARDGVGELQLL MPTLARLTQAQRRVVLVGAPYVPYPQAWLAAAVDLRHLVLLQASGRDALWAAEQCLRS GSCAAVLCWPPQADDRALRRLQVAAESGQALGFAYRPLREAVNPSPAALRLCIETRPP RLRILKCRGGLAPATVLPASAWQ" misc_feature complement(732147..732650) /locus_tag="PA0671" /note="Cell division inhibitor SulA, prevents FtsZ ring assembly [Cell cycle control, cell division, chromosome partitioning]; Region: SulA; cl46042" /db_xref="CDD:480382" protein_bind 732860..732878 /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA0672" /bound_moiety="Fur" protein_bind 732883..732901 /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA0672" /bound_moiety="Fur" gene 732959..733555 /gene="hemO" /locus_tag="PA0672" /db_xref="GeneID:880820" CDS 732959..733555 /gene="hemO" /locus_tag="PA0672" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="heme oxygenase" /protein_id="NP_249363.1" /db_xref="GeneID:880820" /translation="MDTLAPESTRQNLRSQRLNLLTNEPHQRLESLVKSKEPFASRDN FARFVAAQYLFQHDLEPLYRNEALARLFPGLASRARDDAARADLADLGHPVPEGDQSV READLSLAEALGWLFVSEGSKLGAAFLFKKAAALELDENFGARHLAEPEGGRAQGWKS FVAILDGIELNEEEERLAAKGASDAFNRFGDLLERTFA" misc_feature 732998..733543 /gene="hemO" /locus_tag="PA0672" /note="heme oxygenase; Region: HemeO-like; cd00232" /db_xref="CDD:350855" misc_feature order(733013..733015,733034..733036,733043..733048, 733121..733123,733307..733315,733319..733324, 733340..733342,733430..733432,733442..733444, 733514..733516,733523..733525,733535..733537) /gene="hemO" /locus_tag="PA0672" /note="heme binding site [chemical binding]; other site" /db_xref="CDD:350855" misc_feature 733286..733363 /gene="hemO" /locus_tag="PA0672" /note="kinked helix [structural motif]; Region: kinked helix" /db_xref="CDD:350855" gene complement(733673..733993) /locus_tag="PA0673" /db_xref="GeneID:880755" CDS complement(733673..733993) /locus_tag="PA0673" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249364.1" /db_xref="GeneID:880755" /translation="MHRSSQVLPALILGLAMNATLADEPTPPANCISTEVNGYQALSY ECLSQQMADPDSAARARREQELDSAAIVRRPPNQLGLYNQSATRIRLGTSFGNSVEAQ RPPR" protein_bind 734083..734095 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0674" /bound_moiety="AmrZ" protein_bind complement(734112..734124) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0674" /bound_moiety="AmrZ" gene 734159..734875 /gene="vreA" /locus_tag="PA0674" /db_xref="GeneID:879213" CDS 734159..734875 /gene="vreA" /locus_tag="PA0674" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249365.1" /db_xref="GeneID:879213" /translation="MSILGVARSCAVSLLGLGMLLPASGAVPGDGGRPPLRLAVHAFD IPPQSLASALVTYSGVTGMAVLVDGELARGRRSARLQGRFTASDALTRLLGGTGLMAR YTSQEAFTLLPAQAVRNAAPLPAEMPKVEQPLDRRYAGAVQAALEEQLCRSPRTRPGT YRAVLQLWIGRFGEVRHSRLLGSTGDPQRDSALVESLRGVRVMQATPATLAQPLTILL LPKTTGKAMECKLTEGVGGS" misc_feature 734345..734500 /gene="vreA" /locus_tag="PA0674" /note="Secretin and TonB N terminus short domain; Region: STN; smart00965" /db_xref="CDD:198033" misc_feature 734564..>734752 /gene="vreA" /locus_tag="PA0674" /note="TonB C terminal; Region: TonB_2; pfam13103" /db_xref="CDD:463788" gene 734872..735417 /gene="vreI" /locus_tag="PA0675" /db_xref="GeneID:878410" CDS 734872..735417 /gene="vreI" /locus_tag="PA0675" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="ECF sigma factor VreI" /protein_id="NP_249366.1" /db_xref="GeneID:878410" /translation="MSDSRQSAMVKLFLASYDDFKARLKRRLGSEDLACDVLHETYLR VDRLDDALEVKKPQAYLFRIALNIAADRREGDARLLTGEEVAELLQVADEGLDPERIV GGHAEIRRLLEALCELPARRRQILIASRLEETPHAEISRRFGISTRTVEKELKAALWF CAERLERKVIQRFGPGAGKPS" misc_feature 734872..735372 /gene="vreI" /locus_tag="PA0675" /note="DNA-directed RNA polymerase specialized sigma subunit, sigma24 family [Transcription]; Region: RpoE; COG1595" /db_xref="CDD:441203" gene 735487..736446 /gene="vreR" /locus_tag="PA0676" /db_xref="GeneID:878456" CDS 735487..736446 /gene="vreR" /locus_tag="PA0676" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="sigma factor regulator VreR" /protein_id="NP_249367.1" /db_xref="GeneID:878456" /translation="MTASDSAADETGDLRHEAHAWVISLTSGRVTQGDARAFRQWCAR SPQHLRAFVEARDLWQALGSAAALPLEPPAVAQIAPRRFGRRWFVGGALAASVALFVL RPSLLDHGLGGADYVTAVGEQRQVQVSGETRIEMNTRTRLNVRRNQEQQETIELLGGE AEIIASHPPQSSLRVMAGSAWLSASRARFNVRSSGDVCVVTCLEGSVRLEHLGQRLDL QAGQQLTFDERRNGPPVPFDVAEVMAWRERMLVFNDVPLATVIDEINRYRPGMLLLLD KALGRRRVQARFSLDQLADVATLIRDAYGIEVTRLPGGVVLLG" misc_feature 735535..735660 /gene="vreR" /locus_tag="PA0676" /note="Domain of unknown function (DUF4880); Region: DUF4880; pfam16220" /db_xref="CDD:435227" misc_feature 735703..736437 /gene="vreR" /locus_tag="PA0676" /note="Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport [Inorganic ion transport and metabolism, Signal transduction mechanisms]; Region: FecR; COG3712" /db_xref="CDD:442926" gene complement(736456..737097) /locus_tag="PA0677" /db_xref="GeneID:880651" CDS complement(736456..737097) /locus_tag="PA0677" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="HxcW pseudopilin" /protein_id="NP_249368.1" /db_xref="GeneID:880651" /translation="MSGYAERATTRRRQAGFTLIEVMVAIMLMAIVSLMAWRGLDSIA RASAHLEDSTEQGAALLRALNQLERDIALHSAIREETGLPSGDEPIRAGDSLPPGLAL KRLSEIPLRLDIVRASTEPGAPLQRVRWWRQGKVLYRAASPSGDRLPLPPLAERVAVL DDVSRFDIRAWVPGKGWTRLPARSKVRASGLEISLARVTRNGVERYRRVVALQ" misc_feature complement(736684..737073) /locus_tag="PA0677" /note="Type II secretory pathway, PulJ/GspJ component [Intracellular trafficking, secretion, and vesicular transport]; Region: PulJ; COG4795" /db_xref="CDD:443823" gene complement(737081..737530) /locus_tag="PA0678" /db_xref="GeneID:880707" CDS complement(737081..737530) /locus_tag="PA0678" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="HxcU pseudopilin" /protein_id="NP_249369.1" /db_xref="GeneID:880707" /translation="MRRPRQSGFTLIELMVVLVIVGIATAAISLSARPDPTGLLRQDA ARLARLLEIAQGEARVRGTPILWQPSAKGYRFSPQAYRGKTDAFAADTELRARDWQAA PLRVSVRPPRPVLLDAEWIGAPLRITLSDGQHSVTVLREANGHVRVR" misc_feature complement(737084..737521) /locus_tag="PA0678" /note="type II secretion system protein H; Region: typeII_sec_gspH; TIGR01708" /db_xref="CDD:130769" gene 737677..738108 /locus_tag="PA0679" /db_xref="GeneID:879201" CDS 737677..738108 /locus_tag="PA0679" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249370.1" /db_xref="GeneID:879201" /translation="MPAMPRIDPPRLVQFAAVLAILAGLLFWGYLLLAPIPGVVQADV ADVPPPSGEDAAQRWFAAPSGEVEVQLAGLISGGPAAIAILSVNGAPAQAYREGEVLA RAAKVRRIEADAVLIEQNGEVRRVPMQRLAEPPPLATLKRG" misc_feature 737719..738039 /locus_tag="PA0679" /note="Type II secretion system protein C; Region: T2SSC; cl44344" /db_xref="CDD:457689" gene complement(738111..738485) /locus_tag="PA0680" /db_xref="GeneID:880812" CDS complement(738111..738485) /locus_tag="PA0680" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="HxcV pseudopilin" /protein_id="NP_249371.1" /db_xref="GeneID:880812" /translation="MSTRLSSRGFTLIEVLVALAIVAIALAAAIRAVGLMTDGNGLLR DKSLALLAAESRLAELRLGVGAAPGNSDFECSQGRLRLYCEQRVEATDDPALLWVEIR VRTQREQAVPLARLNTLLSRSR" misc_feature complement(738162..738461) /locus_tag="PA0680" /note="type II secretion system protein I; Region: gspI; TIGR01707" /db_xref="CDD:273767" gene 738719..739168 /locus_tag="PA0681" /db_xref="GeneID:879708" CDS 738719..739168 /locus_tag="PA0681" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="HxcT pseudopilin" /protein_id="NP_249372.1" /db_xref="GeneID:879708" /translation="MDVVQFSSSPKGHRGQRGFTLIEIMVVVVILGILAAMVVPKVLD RPDQARATAARQDISGLMQALKLYRLDQGRYPSQAQGLKVLAERPADASASNWRSYLE RLPNDPWGKPYQYLNPGVNGEIDVFSLGADGQPGGEGINADIGSWQL" misc_feature 738767..739162 /locus_tag="PA0681" /note="type II secretion system protein G; Region: typeII_sec_gspG; TIGR01710" /db_xref="CDD:130771" gene 739176..740141 /locus_tag="PA0682" /db_xref="GeneID:880818" CDS 739176..740141 /locus_tag="PA0682" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="HxcX atypical pseudopilin" /protein_id="NP_249373.1" /db_xref="GeneID:880818" /translation="MNGHRQRGMAIISALLIVTVVAVIAAGLIARQSAFIRALESEQL RIQAGWMLRGGLEWSRQLLLEDSRRDPLTRLDQRWAQPMRGLRLSSAELPFNGQLEDE QGKFNLRNLLVDQRPDLQERANFERLADLLGVRPKEARLIVERVLASYARLPAEAPPA ETQPAGFDSGRETSPGAVLRALPARMPALRRLDDLARLGIPPATLERLRPYVTILPET TWINGNTARAEVLAACVPGLGLDQARRVLGERDRGRWFLNRGDFVNRLNMPQLQAQSV KVGITSDWFLLTAYARRDRQEVRLQALVQRKAGESTAVNWMRVGS" misc_feature 739191..740093 /locus_tag="PA0682" /note="type II secretion system minor pseudopilin GspK; Region: T2SS_GspK; NF037980" /db_xref="CDD:468299" gene 740203..741348 /locus_tag="PA0683" /db_xref="GeneID:880821" CDS 740203..741348 /locus_tag="PA0683" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="type II secretion system protein" /protein_id="NP_249374.1" /db_xref="GeneID:880821" /translation="MFAPGCARRGAGTNRGLARGTGAAAPGVAGGAVPASARLPPGQS RTAGAACGEACRRGELRGRGAGPRRSGAVRLAHGPRGADGRLTLEWLEASALASLEQA VQRLRLDVREVQAAPFLLPLRDDAWVAGEWDGHLLLRRSLSDAVVHPLPEQGLAEVPQ ELRLFWLGERPAWRSAALERAEALDEALRWSGPASPWGLALKAPATSAGNGTWKMPLF CAALALLVWVAGLNLYAGQLAEQGQSLQRQSSQRVQQAFPELPVVLDPLRQARERRDA YLAGKADGDAAPGLAALLHGAGEAMPFLAGRLQRLDYHAGELDLELLPGLPGGDAAAW QGELGKHGLQADASDKGWQVRAMEAPPAPAAGAADSGTAEAAADEDE" misc_feature <740425..740832 /locus_tag="PA0683" /note="ATPase-like domain of the ASKHA (Acetate and Sugar Kinases/Hsc70/Actin) superfamily; Region: ASKHA_ATPase-like; cl49607" /db_xref="CDD:483947" misc_feature 740821..741267 /locus_tag="PA0683" /note="GspL periplasmic domain; Region: GspL_C; cl14909" /db_xref="CDD:449377" gene 741335..741928 /locus_tag="PA0684" /db_xref="GeneID:880816" CDS 741335..741928 /locus_tag="PA0684" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="type II secretion system protein" /protein_id="NP_249375.1" /db_xref="GeneID:880816" /translation="MKMNKRLAGLLNTPAQRWSPLLLRLQAYWRQLAPRERKILAGGG LALCLALTWQVFVDPPLARIEHWQAELPRLRAQAAAVDGVLREVEALRGPTLSGTADA EAIRRSLRDQGLDGFQLDAPQPGQWQLDFASVSGEALLRWLARSPAALRLSVSEAQVT RLDAPSEERSGSSNELSGGLVSASIHLQSTSAPKDSP" misc_feature 741404..741901 /locus_tag="PA0684" /note="Type II secretion system (T2SS), protein M; Region: T2SSM; pfam04612" /db_xref="CDD:428034" gene 741925..744336 /locus_tag="PA0685" /db_xref="GeneID:880813" CDS 741925..744336 /locus_tag="PA0685" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="type II secretion system protein" /protein_id="NP_249376.1" /db_xref="GeneID:880813" /translation="MRQSAFHHARRRWPVLGVALGALLVAACSETPKVPGVPPADEEV GRPLSSVRSGAPLRSADVRERPQAEQARRALSAGRGVARSGGVAPVSATAAELGEQPV SLNFVDTEVEAVVRALSRATGRQFLVDPRVKGKLTLVSEGQVPARTAYRMLTSALRMQ GFSVVDVDGVSQVVPEADAKLLGGPVYGADRPAANGMVTRTFRLRYENAVNLIPVLRP IVAQNNPINAYPGNNTVVVTDYAENLDRVAGIIASIDIPSASDTDVVPIQNGIAVDIA STVSELLDSQGSGGAEQGQKTVVLADPRSNSIVIRSPSPERTQLARDLIGKLDSVQSN PGNLHVVYLRNAQATRLAQALRGLITGDSGGEGNEGDQQRARLSGGGMLGGGNSGTGS QGLGSSGNTTGSGSSGLGGSNRSGGAYGAMGSGQGGAGPGAMGEENSAFSAGGVTVQA DATTNTLLISAPEPLYRNLREVIDLLDQRRAQVVIESLIVEVSEDDSSEFGIQWQAGN LGGNGVFGGVNFGQSALNTAGKNTIDVLPKGLNIGLVDGTVDIPGIGKILDLKVLARA LKSRGGTNVLSTPNLLTLDNESASIMVGQTIPFVSGQYVTDGGGTSNNPFQTIQREDV GLKLNIRPQISEGGTVKLDVYQEVSSVDERASTAAGVVTNKRAIDTSILLDDGQIMVL GGLLQDNVQDNTDGVPGLSSLPGVGSLFRYQKRSRTKTNLMVFLRPYIVRDAAAGRSI TLNRYDFIRRAQQRVQPRHDWSVGDMQAPVLPPAQQGIPQAAYDLRPSPRPLRAVPLG EAAPL" misc_feature 742234..744147 /locus_tag="PA0685" /note="type II secretion system protein D; Region: type_II_gspD; TIGR02517" /db_xref="CDD:274175" gene 744333..745742 /locus_tag="PA0686" /db_xref="GeneID:880808" CDS 744333..745742 /locus_tag="PA0686" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="type II secretion system protein HxcR" /protein_id="NP_249377.1" /db_xref="GeneID:880808" /translation="MSLLPYAWAKAQRALLRPGEHGATLLVSPRTPGWAISEVRQRHA PASLESVRDDELDTLLASAYSDTGSAAAVVGAAESEVDLDRLMDDIPEVTDLLDTQDG APVIRMINALLTQAARDEASDIHIEPFETHSVVRYRVDGALRDVVAPRKALHAALVSR IKIMAQLDIAEKRLPQDGRIALRVAGRPIDIRVSTVPTGHGERVVMRLLDKQAGRLRL ETLGMAPGVLAPLDNLIRQPHGIVLVTGPTGSGKTTTLYAALARLDASTSNILTVEDP VEYDLPGISQIQVNARIDMTFAVALRAILRQDPDIIMIGEIRDLETAQIAVQASLTGH LVLATLHTNDAVSAVTRLVDMGVEPFLLASSMLGVLAQRLVRRLCTHCRVEEDGGWRA VGCPACNQTGYSGRTGIHELFVIDDEIRRLVHQGRAEQDLREAARAAGMRSMREDGER WIASGSTTLEEILRVTRDA" misc_feature 744342..745730 /locus_tag="PA0686" /note="type II secretion system protein E; Region: type_II_gspE; TIGR02533" /db_xref="CDD:131585" gene 745742..746956 /locus_tag="PA0687" /db_xref="GeneID:880805" CDS 745742..746956 /locus_tag="PA0687" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="type II secretion system protein" /protein_id="NP_249378.1" /db_xref="GeneID:880805" /translation="MQTFRYEAADAQGRIETGTLEADSQRGALGQLRARGLTPLEVRE QAGGGTGQGAGALFAPRLSDGDLAWATRQLASLLAASLPLEAALSATLDQAERKHIAQ TLSAVRSDVRGGMRLADALAARPRDFPEIYRALVAAGEESGDLAQVMERLADYIEERN ALRGKILTAFIYPAVVGVVSIGIVIFLLGYVVPQVVSAFSQARQDLPALTRAMLQASD FVRAWGWLCAGAIGSAYWGWRLYLRDPQARLGWHRRVLRLPLLGRFVLGVNTARFAST LAILGSAGVPLLRALDAARQTLANDCLAQAVEEATAQVREGVSLASALRTRQVFPPIL THLIASGEKTGALPPMLDRAAQTLSRDIERRAMGMTALLEPLMIVVMGGVVLTIVMAV LMPIIEMNQLVQ" misc_feature 745751..746950 /locus_tag="PA0687" /note="type II secretion system protein F; Region: GspF; TIGR02120" /db_xref="CDD:273980" gene 747470..748576 /locus_tag="PA0688" /db_xref="GeneID:880790" CDS 747470..748576 /locus_tag="PA0688" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="alkaline phosphatase L" /protein_id="NP_249379.1" /db_xref="GeneID:880790" /translation="MFKRSLIAASLSVAALVSAQAMAVTGGGASLPAELYKGSADSIL PANFSYAVTGSGTGKNAFLTNNSSLFGTTGTVHYAGSDSVLSGSELTTYNSNYNGTYG PLIQIPSVATSVTVPYRKDGNTTLNLTSAQLCDAFSGAKTTWGQLLGTTDSTPIRIVY RTGSSGTTELFTRHLNSICPTRFATNSTFTNARLPAGGTLPSNWVGVAATSTVVSTVK ATNGSLGYVSPDAVNINSNAEVSRVNGNLPTQANVSTALGSVAPPANAADRADPSKWV PVFTNPSAGYSIVGYTNFVFGQCYKDASVSTDVRAFINKHYGGTTTNAAVAAHGFIPL TPAWKSAIVSAFYTGTSENLAIGNTNVCNTKGRP" misc_feature 747530..748423 /locus_tag="PA0688" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" gene 748662..749774 /locus_tag="PA0689" /db_xref="GeneID:880810" CDS 748662..749774 /locus_tag="PA0689" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249380.1" /db_xref="GeneID:880810" /translation="MLKPMFGVVALTLLTSHTTLGATVTGGGASMPAKLYKGSADSIL PINFSYAASGSGIGKTAFLMNNPMLLGATTGTVHYIGSDSILSSSELSAYSTNYRGAY GPLIQIPLAGTAVTIPYKKPDITDLNLTSAQLCDAFSGAKVTWGQLLGNPADRTPIRI VYQRGGSGATELLTRHLNSVCPTRFATNSIFTNARLPAGGALPSNWVAVQPYESVRNA VDNVSGSIGYEGPDGVDLSDNSKIARVNGLLPTLANRVIAVRSVAPPGVAADRADPSK WIPVFVNPNAGYSIVGYTNFVFGQCYKDATVAADLRAFLTQHYGGTTTNRAVADHRFV PLVASWKSAIMSAFITGTSENLAINNPSVCNGKGRP" misc_feature 748725..749621 /locus_tag="PA0689" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" gene 749957..762499 /locus_tag="PA0690" /db_xref="GeneID:880803" CDS 749957..762499 /locus_tag="PA0690" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249381.1" /db_xref="GeneID:880803" /translation="MPSRSPSSARSSRALYAPRLKPLAQAIALLLVAGGAQAAGQPFS AAWFAAKGAAQGGAAGAPRPGAQLPGAPPPLAQQQRVNQQLQRSMANLNNTVAAIAAQ QAAQAAGRQAALNLPQDVPDGLGEGGLKVDASLPFEQAWQNAKGPVQTQAAGKTTVSI EQTADKAVLNWETFNVGRNTTVDFQQHADWALLNRVNDPSARPSQIQGQIKADGTVML VNRNGVVFSGSSQVDVRNLTVAAANISDEQFRQRGLYYDNAGSRPTFTDAAGAVRVEQ GAQLRTAAPSGSTRGGGYVLLLGSEVDNAGSIVTPKGQTVLSAGDSFVIRRGQGTDGN LTSTTRGNEVLPGFAADSSAGRVRNSGLVQAATGDISLSGREVEQAGVLLSSSSVDSR GTLHLKASERITLAEGATSAILVDSSGSAALDSQREALLKPLNGSSAAVSRGDDDRRD LSRVEIDSAGSVDFRDGSITLASGGQVAVNAGQRALLRDGAVIDVSGAQGVQVAMETN SIKVNVRGNEQRDASVNREGGGLNSQDVWVDVRDLVRVPAGTNGYASDRWYTAGGLLE VGGYLGTQGHSAGEWMAQGGIVSFTGNDVVTQAGSQINLSGGTLDVQGGYIRQTWLKG SDGRLYELGSAPGDLLYDGIYRGYEAHSERWDQTRYFYNPLIAPTQRYENGYSVGRDA GSLVIGSANARLDGQVVGDTYRGERQTEAPQAGLDGYNQSQNAVARGAQLVVGRYTPY YVKSSGLLEYALGADAGSLKQVVIGTGEVAAEEPTLDAPVAAERQGRLSLDSELLNGF QLGGLKVAAGESIRVDSALTLANGGEAILFANDVAIDADITAHGGSLQAGNVLAQISP NGTIDGFVDAGREAGILRVGDGVRLDASGLWSNLLLAPEDNDTLAYRDGGRISLRSGG DLSLGQGSLLDVSSGAALLADGKRLGGRGGDIALHASAGLAQASDGQLQLGGTLNGLG TSGAGTLSLQSGKVRIGGDDLGDGSLQLAEDFFQQGFASYRVVGRSGLTVAEDAQVRV ARPVYRFASGAGEVAAGEAPREALEAWIPPLYLEDALAGRLVQREGADLYLQAGGDGN ILGQLDPASQTLELGRGSLVEVDPGRAIVLRGPGQITLDGILNAWGGRIDVRQQQFGA LDVTQDNQPKAQGQPHARSIWIGEQALLDVAGRAVTALDGRGRRYGEVQSGGSIVIGG EIDPGKAIATSADAFVIVRPGARLEASGSQAQLDVPGLGRVLLAGDGGRIALSSYNGL YLDGSLRAAAGGSGAAGGSLEIIADAPLYQGFTVVDDRVLAMRELILTAGHADSGLPT LLQPGMDDSALRYGQSRVGTQSLTGGGFDQLSLFSNGPLSFEGNIDLAMGRSLNLYAG TIAATGGGPSEVKLQAPYVRLSGIGMYGQQASGEFRPRLTYGPTATAEQVRLQVSAGR LLDIAGRLSFGSDGVINGVNAEAVRYQRPGFEKVTLRSEGDLRFAGDYPENGDPSGRL ITHGDLQLTAAQLYPVTGASSTLYAGYGLDEGGQAVFDAERHLAIERSGESLPDTPLS VFGSLAFMASNIEQGGVVRAPLGLIQFGSNLDRAPGTVRLLPGSLTSVSGAELVMPYG GTTDGINYLVNQVPIQLTGAGGALAAGTLVAGVGLYASEVDVQQGARLDLSGGGELAG AGFISGRGGSTDARFHPLVQQDNDGFRLPELSSNPVYAIVPGHQAVSAPLGGEAGAIQ PLVGQQVTIGDGVPGLAAGTYTLLPSTYALLPGAFRVEINGLAGQGAPMATQGLRNGS WATSGQLSIAGTSIRDSLSRQVILSSADTLRRYSQYNEMSYADFIRADAARKNIPRAM LPVDARSLYLGLRADEELRENALSFEGKVDFTPEESGYGGSLIVDAEAGIEILPEGGL PDSDFAGVSLVADDLNAIGASRIAIGTLPYVEYGEQGNFVQFGGSNRLFPVVLRKGAH LSAPEVIIGRDITLEGGSGISTLGKGKTAYDSSDGFIYQPGGRNLLLLSNGWLNLLAP AADSSLPVRLGGCAEGAGCADTELYSEGTLGIATNGTVTFGDNVRYGTRNLSLALSTI NIGSSQSLADAAARGVLPNGLALDQTVLQRLLRGERGAGIPALENLILSARDAVNIYG SVSLDTYDPATGKSSLANLVLGTPAIYGHGTGEDVASIRTASLVWSGSSQPAAAPVAG GAGSGSGTLRVDAERITLGYGANTQPAGETDEARLALGFAEVQLNASERISANHKGSL RVYQRLDGYVAGEGLRYSGGDLRLSTPLLTGEAGSLSRISSGGSLSLAAPAGAAAVTF DSGTAGLGAELSLSAREIRLDSAVSLPSGKLSLSAEDDLELGDGARIDLAGRKASFND VDKYSWGGDLLLSSRAGDIRQAAGSLIDLSARNNRGGTLSAVALAEDAGVVDLQGRIL GGASGDYDAGGTRVPFLGGELEIRAQRLGDGGSLSEQFTALNQRLNQGEVFGARRFQL KQGDLQIGDGLKAHRIEVSLDNGQLGVSGTVDASGAQVGEIRLAGGRGLSLGGNALLD AHGSLLRRDSYGQIIDSPNRAMVELSSGSGTLVLAGGARIDLRHGTAAPAEQVDGVAR GTLELNAPRLGGVSAGDIAIDASGALDIRGAGSIALNAMQRYDDAPWGNDPAAGGRSY QVIDQAYLDARHAESSAFIAAALANRELLDGKLAGLTNATYADAFHLRPGVEIVSATA DGDLVVQGDLDLSGYRYASLNPNTPLTEVYGSGEVGALVLRAGGDLNLYGSINDGFAP PPDSPDDKGWILTPGVQPFGGDLVVPGPGVVLGDGTAFLGGRTLNYDLPIKGTTLAAG TRLATEAVLEQPYTLAAGSVLVADIHDAAGTLLYAAGSLLRDGVTLEVGSRLGAGTLL AAPASVQAMTWPAGVPLPSILREGPSRPNVLLLNGELALARGSLIPSQTEVVLAGDAP FIELRPSDGVRQGRNWALAEMLPAGSQSWSMRLVAGADLAAADNRLVRPDSSASLNLA DTHYQAKIEQSSGGLVFTDQATDWGITPGTPVDESNEWICGLGPYCAEPPRWTWAPGN YLGMPAGTAIGEGDLWWCSVDPSLCIENLGKTVVTPQNQLFSVLRTGTGDLDLASAGN LTQWSPYGVYTAGTQAADVATGFNQPRGLFNGSVLGAGGADYEVLSTSQYQAWYPEHG GNLDIAVGGDVVGDQWAEKLTSSDPIRPLPPSAAVGNWLWRQGSADREGVPTAWWVNF GSYVRGAEGDAPYLVGFTGFGTLGGGNLSMRTGGDAGNIAPRGDGSIPSSGNLNPRSQ GLVLAVAGTGRLTSDGALQLGGGGDLNVRIGGEVNPSREARATQTYSSSGFDGLYSGG TIHDLQGALINLRGSASLYSGALGGIDPRYDTLLRDPAEVRSRDAFSPTLASSTGGLT LVAGDTGMRLETRGDLVLGGVTDPGRVGVPNTVGFTAPDGSVYQGGGIAWFSLWTAHT SIDLFAAGGNLTPSTQLVEATNAIPMAGRNLSPSDGRFIYPSIVRAAAPEGSIYLGPS SGDMGGVSLNVSTTPYSLLLAPSLNGELELLAGDSIYAGGYSVQRSGADPANLPSIWT PAFAGYSDAALLNPIAGNGSPDGNPAVIGGLPLFYFGPDSAASLARDLQPARFYALTG DIVGLNSGAQIRFGEQAGNRAGQTWYEGAGPVWMRAGRDIVASGTPLGQRISAPSQIS TDASFTGNLFVHDDPNDLSLVQAGRDILYGNFNVAGPGTLEISAGRNILMEDRAAITS LGAVVPGDSRPGADIVLQAGAAGADYQAFLERYLDPANLAQAGTPLAEQPGKVVRTYE SELAKWLNERFGFAGDAEQAQAFFAGLPAEQQRIFARQVYFAELRAGGREYNEVGGVR QGSYLRGRNAIAALFPERDPAGNPISYEGDIVMYGGAGVHTDFGGDIQLLSPGGRQVF GIEGEAPPSTAGIVTQGQGDIQAYSRDSILLGQSRIMTTFGGSILAWSAEGDINAGRG SQTTVVYTPPRRIYDAWGNVSLSPQVPSTGAGIATLNPIPEVAPGDIDLIAPLGTIDA GEAGIRVSGNVNVAALQVVNAANIQTQGQSSGIPLVASVNTGALTSASAAASSATQAA EDVSRQQQAAARQRMPSVITVQVLGFGNERLEPSRDGASRSPGYNPDSAVQVLGAGAL GEQARSQLTDEERGNLIL" misc_feature 750359..751090 /locus_tag="PA0690" /note="TPS secretion domain; Region: TPS; pfam05860" /db_xref="CDD:461762" misc_feature <752060..753613 /locus_tag="PA0690" /note="Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]; Region: PksD; COG3321" /db_xref="CDD:442550" misc_feature <753041..754570 /locus_tag="PA0690" /note="Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]; Region: PksD; COG3321" /db_xref="CDD:442550" misc_feature 761867..762196 /locus_tag="PA0690" /note="Filamentous haemagglutinin family outer membrane protein; Region: DUF3739; pfam12545" /db_xref="CDD:432625" protein_bind complement(759481..759493) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0691" /bound_moiety="AmrZ" gene 762891..763493 /locus_tag="PA0691" /db_xref="GeneID:880799" CDS 762891..763493 /locus_tag="PA0691" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249382.1" /db_xref="GeneID:880799" /translation="MESYSKVGMQELDQRLSKIVEAARKKPVSVYRYGAPWVWIVSQE DWQGALKEVSSYIPPGHSLALLKPQIESLLGEEAKVLSALAREHGMQLAPEPLIHALL LQLLYAIPSEQQLYEQLNYNLLYRWFVGLEMKQKIWNFPVFVSDITVLLNSAEAVRII GRIIGEVISGDLMQMPEFSLNFALLHTWQARHGGARRLNI" misc_feature 763044..763466 /locus_tag="PA0691" /note="Transposase, IS1182 family [Mobilome: prophages, transposons]; Region: COG3666" /db_xref="CDD:442883" gene 763657..765291 /locus_tag="PA0692" /db_xref="GeneID:880708" CDS 763657..765291 /locus_tag="PA0692" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249383.1" /db_xref="GeneID:880708" /translation="MKRSLFNCAHPFRQRWSIGCLAVALSCASLADEAPPAAAGAEPQ RLVDINEYVVRGNTVLDNRAIEAAVYPFLGPQRSLGDIEGARDALQAAYQEKGYQSVY VELPEQQVSGGVVYLQVTETTIGRVRVVGAKHYSPVELREEVPALEEGKVPDFAQVQR ELAQVNRTPGRQVLPMVREGQRPGTMDVDLQVEDKNPWHASIGLNNDYSADTRHLRSV VSLGYDNLWQLGHAISLTYFTAPQDQDNAKVWSGSYTAPLSQRWSVQLSGYQSDSDVA TVGSMNVVGQGHSYGVAAIYSLPVTGLWSHSFSFGVDFKDFEEQTRIGGNNDRVPIKY APLTLGYNGFRYTERSQLALGLSLVAGTGSLLGYGDDDEEFDRKRYRAKSGFGVLKGD LNHTLTFGGDWQVATKAAFQLASGPLISNEQFAAGGATSVRGYLAAENTADDGYLLSQ EWRTPSLGRFLGKRAGGYVNDWRFYVFAEGAQLRLQDALPEQDDDFSLASVGIGTRAQ LADWLSGSLDWAFPLLEGTNTDKHDSRLHFSVQASF" misc_feature 763795..765288 /locus_tag="PA0692" /note="Hemolysin activation/secretion protein [Intracellular trafficking, secretion, and vesicular transport]; Region: FhaC; COG2831" /db_xref="CDD:442079" gene 765315..767162 /gene="exbB2" /locus_tag="PA0693" /db_xref="GeneID:880774" CDS 765315..767162 /gene="exbB2" /locus_tag="PA0693" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transporter ExbB" /protein_id="NP_249384.1" /db_xref="GeneID:880774" /translation="MYRLLLTSLICLGLLAPASASAWWQDDWQYRKQVSVDTTPQGAA INDSLGRLPLLVRLHTGNFTFDGVNENGSDIRFVAADDKTVLRHQVESFDPLMGMALI WVDVPRVEGGQRQDIWMYYGNAKAPESGNGQSVFDPDYTLVYHFDGAPGTPPRDSTAY ANNAQTAAGSPVEGVIGRSAQLLGQPLLLPASPSLAVSAGGTFSFSGWVRPDQLAGEQ VLLSRREGGNALLVGLAQGAPFVELNGQRAAASQALAQGQWQHLALVADGTRLALYLG GREVASLAAALPAFSGAIAIGAEGQGAPAVATEAASGEGEASAAAPTLQPFQGAIDEL RLSKIARPAALLLADATAQGAESRLVAYGVDEKQSGFGFGKLGFLLNAVPLDAWVIIA ILALMMVQSWVIMYRKNQNVGRVSRANGLFRERFAEVGTRLELLADDRELAARLQHSS LWRLYQVAVKEIRTRREQGADTSSVSAATIEAIRASMDGVRTKENQQLGSRLSSLSNA IAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIAPGMAAALLATAMGLFVAIPALFG YNRLVTRNKEVSADMRVFVDEFVTRLAEVHGESQLSEVAHRRNGQPLPA" misc_feature 765315..767108 /gene="exbB2" /locus_tag="PA0693" /note="Uncharacterized conserved protein MJ1470, contains DUF2341 domain, predicted component of type IV pili-like system [General function prediction only]; Region: MJ1470; COG5306" /db_xref="CDD:444105" gene 767173..767592 /gene="exbD2" /locus_tag="PA0694" /db_xref="GeneID:880789" CDS 767173..767592 /gene="exbD2" /locus_tag="PA0694" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transporter ExbD" /protein_id="NP_249385.1" /db_xref="GeneID:880789" /translation="MASVNSSHDDDDDGAVDSINITPLVDVLMVVLVMFILTATAQVA GIQINLPKASATVALSQPKTKAISVNDAGQVFLDAYPVTLPELEDRLRTEKALNPDFP VVVRGDATVQYQKVIEVLDLLRRLELSQVGLVTGKPT" misc_feature <767275..767586 /gene="exbD2" /locus_tag="PA0694" /note="Biopolymer transport protein ExbD [Intracellular trafficking, secretion, and vesicular transport]; Region: ExbD; COG0848" /db_xref="CDD:440609" gene 767601..768347 /locus_tag="PA0695" /db_xref="GeneID:882165" CDS 767601..768347 /locus_tag="PA0695" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249386.1" /db_xref="GeneID:882165" /translation="MNMSADPKHTPEPKNAAPLSIDGRPANPTLRYLKWGLGALLLAG LAWLVWEWANDMSGVRREAPKVPAIIPLPPPPPPPPEKPPEPEQPVEEEKIVEPEPQP ELEEVKPQEEAPPSPADDLADPMQMDGDAQSGSDAFNIGAGKGGGMAGSGGGRAGNAS YSQYLAYAFQRLLRDNPELRNLAFRLQAEIWLSSSGDITRAELTRSSGDPETDQKVLA ALRAAGRLEERPPASLTLPVRIALQGKRPG" misc_feature 768165..768317 /locus_tag="PA0695" /note="TonB family C-terminal domain; Region: tonB_Cterm; TIGR01352" /db_xref="CDD:273570" gene 768415..770121 /locus_tag="PA0696" /db_xref="GeneID:880782" CDS 768415..770121 /locus_tag="PA0696" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249387.1" /db_xref="GeneID:880782" /translation="MNAKVNRLALGMGVMLAALAGQAQAQPPAPSENATINLIRLLVQ QGVLKKEQADALVRQAEAEAQQAQQARQAVAPAAAVAAVPGEVRVPYIPQVVRDQIRD EVKAEVMTQAKAENWAQPNAFPDWASRISFDGDVRLRYESRSFGNGNSNQITDFAELN DDGPYDVNPNTSAGLPPLLNTREDRDSLLRLRARFGLKAALSESWSAGIRIGTGSDNN PVSTTQTLGGGFGKKDLWLDQGYLTWKPSERLSLTGGRIANPFLSTDLLYSNDLNFDG VAAIFNQPLSRDVALFGTVGAFPVEYSSDTASSNGFDKEDSDNKWLYGAQLGATWKIN PQHSLTGALAYYRFDDIEGRRSSPCRPWAGDPECDTDGSRPTFMQKGNTVFLLRDIVP NPADPANTPNPQYVGLASEFNLLDLNLGWDAELPNDFKLRVAGNYVHNLGYDEGDMRK RAGGVAQIANNLGSDGDIKSGANAWMLQFTLGNALDMRDAGDWQVFAAYKYIQPDALP DGFNDSTFHLGGTNAKGYILGASYGFDKRVYGTARWLSSDEVYGAPFSIDVLQLEVNT RF" misc_feature 768511..770118 /locus_tag="PA0696" /note="Putative porin; Region: Porin_5; pfam16930" /db_xref="CDD:435662" gene 770156..770818 /locus_tag="PA0697" /db_xref="GeneID:878404" CDS 770156..770818 /locus_tag="PA0697" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249388.1" /db_xref="GeneID:878404" /translation="MNTRPFSLPIWAQALLAGAAFAAYASQAAYADSLEERLRAQLRS TTQQLQALQTEQAQATAAKAALESQRDAALAQVKQLSAELARAKGQAEQLSAQQQGLH DRARQMVEASNEQLGKYKQAYDELLVMARAKEAERQKLDLAFREHDQQLQQCTAKNRE MYGVAKEILGAYENVSVAEVMKIRQPFASGARVKFEEMAQKLGDDLYKTQVENRQAAL AQ" misc_feature <770249..>770635 /locus_tag="PA0697" /note="Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; Region: COG4913" /db_xref="CDD:443941" gene 770847..771326 /locus_tag="PA0698" /db_xref="GeneID:880718" CDS 770847..771326 /locus_tag="PA0698" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249389.1" /db_xref="GeneID:880718" /translation="MNDITLIEHLSVDSLTEALQDAGYRVNRSEQNGVVQLLSASQGI GYAVRFGNPAATPASYLDFTFSCALRVQGELPAGLTERWNLSRRFGRLSQQGEFLVME MDVIVAGGVSPANLRSHIELWDRLLQEFIAYLRDYSRLAAEQQGMAQDAGQPVDGEA" misc_feature 770874..771248 /locus_tag="PA0698" /note="YbjN protein family is structurally similar to type III secretion system chaperones; Region: YbjN_AmyR-like; cd17511" /db_xref="CDD:409323" misc_feature order(771003..771005,771030..771032,771036..771038, 771084..771089,771096..771101,771105..771119, 771123..771128,771153..771158,771162..771164, 771171..771179,771189..771191,771198..771200, 771210..771212) /locus_tag="PA0698" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:409323" gene 771331..772275 /locus_tag="PA0699" /db_xref="GeneID:877592" CDS 771331..772275 /locus_tag="PA0699" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="PpiC-type peptidyl-prolyl cis-trans isomerase" /protein_id="NP_249390.1" /db_xref="GeneID:877592" /translation="MRPAFRCGILAFALAVLAGCGQREDGGAGQAQAALAKPSASAAA EPAVARLGALQVAPDELKALLAEVPAETRAQLSENRDAMERWMRARLAEKALYEQASA QDWQQRPQVKTLIDAAARQIVLRTYLESVSTVPEDYPSDAELQAAYQANKAQLAVPAL YRVSQIFIAASAAGGLAEARKRAQELYRQAADGDFAELARKHSDDPQTARNGGDIGGL LAQAQLLPAIRPALERLKVGAVSEPIQGANGFHLVKLTERRDARLATLDEVRGRLRES LRAQRQEQIAKAYLDGLVNNATLSIDGALLGKTLAELH" misc_feature 771787..772224 /locus_tag="PA0699" /note="Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, chaperones]; Region: SurA; COG0760" /db_xref="CDD:440523" gene 772275..772700 /locus_tag="PA0700" /db_xref="GeneID:880765" CDS 772275..772700 /locus_tag="PA0700" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249391.1" /db_xref="GeneID:880765" /translation="MDGIPEARRGPRASRWRHLRSWLFGEPERFRDERQRLWGAYAAW LGEQVQQRLGEDAETAPRLLAFLESRRAAGQLPNTDIDLRVWLDERGWIVRLACLRSD AEPIENELRRALMDRSLRLPPPEHMPQPIELRIRLMPGR" gene 772710..773696 /locus_tag="PA0701" /db_xref="GeneID:880787" CDS 772710..773696 /locus_tag="PA0701" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249392.1" /db_xref="GeneID:880787" /translation="MALSESAGQRPALLRPAQGRDDRAYWHELFGSLEVVHFFLVTAR CGCFMQAARSLDVKPTLLRKTLARLEERLGLHLFVHEGNALSLTREGRIVQAAGQRLV EDSQSHADLHRQQPLVRLAVAESVLHDVLSRELWGYLRKNANLRVALAELREGWPESA GPAEIAIWIADPGQPHPAMEGHFAAPARIAELEYQPHIGKRYSRERTRPASEDELDDY LLAQLHGHAASAALAPWNRRVAARQSGVIEVQSHDLLLQAILWGACIGLLPHYAGRLE RNLAALPQVFDEPMRREVWMSVQPEAENRVEVRALLDLIEHAFDDRRDWFGR" misc_feature 772803..773672 /locus_tag="PA0701" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 773768..774433 /locus_tag="PA0701a" /db_xref="GeneID:17373342" CDS 773768..774433 /locus_tag="PA0701a" /codon_start=1 /transl_table=11 /product="AraC family transcriptional regulator" /protein_id="YP_008719734.1" /db_xref="GeneID:17373342" /translation="MTERHWQGEVWLARDHALFAGVNGDTREHAHYAHQLLLAETPLR VRVAGQVLEARRLLVPSLQAHRVDASQPLLALYAEPLAFDSDDLRQLLEDAPGEPEAL LGRLARLPRRRLDRRVEKALAALDEQLAARVEAERLARSASLSLSQLERLFAVQVGLS VRRLVLWRRLYLAFALALQGRSLTEAAHHAGFADAAHLSRSVRSLLGIRAGLSLPHLR LAG" misc_feature <773846..774391 /locus_tag="PA0701a" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" misc_feature 774173..774391 /locus_tag="PA0701a" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene complement(774416..775321) /locus_tag="PA0702" /db_xref="GeneID:880784" CDS complement(774416..775321) /locus_tag="PA0702" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249393.1" /db_xref="GeneID:880784" /translation="MQFFLRYAYAPLFWSGFIGLATWQVGYRQASHAWLVALFLGALG LSFLAERRLPYQPRWNRPHADRLRDVLHASVNESLNALGILALPLLAGVLGFWPVWPQ AWPLWLQLLLAIVLADLGITLVHYASHRSALLWRLHAVHHSVQRLYGFNGLMKHPLHL GLEALGGTLPLLLLGVPQTVAALLAFAIGIQLLLQHSNVDMRIGGLRHVFAWAPLHRL HHIRYGRAGDVNFALFFSVWDRLLGTALHRPDYRLDSTDMGIGDQPDYPRDYAGQLLA PFRDLPRSRHVPQPPEGLGRSAGQA" misc_feature complement(774527..774997) /locus_tag="PA0702" /note="Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]; Region: ERG3; COG3000" /db_xref="CDD:442238" gene complement(775400..776716) /locus_tag="PA0703" /db_xref="GeneID:878398" CDS complement(775400..776716) /locus_tag="PA0703" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_249394.1" /db_xref="GeneID:878398" /translation="MRSPTRPPAAADPASRRSVFAVVLGNAVEFFDFGVYATFAVMIG RTFFPSDSAFVSLLLSVTAFGVGFVIRPLGAVLIGAYADRAGRKPAMLLTLFLMALGT GGIAVLPGYDSIGPAAPLLLVLTRLLQGLAWGGEAGPATTYILEAAPPHKRGTYACWQ VVAQGIAAVAAGLMGYLLTLWLDERQLQEWGWRIPFAAGLLVLPIGLYIRLNLAETFS GRGRQASTRNLLGELFGNHRRALLLGLLILSGSTITQYFLNYMTTFALTELHLPAGIA MLSTLVAGAALALSALLGGVLCDRYGRRAVLILPRLALLAVLFPALQAMTRHPEPAVF LAVLALLSALHGMSGAALIVLLVESFPRALRSTGFSLVYATGVAAFGGTAQIVVTWLI GVTGNPLSPLGYLLLANLVCLVGAWLARETWPGRGDMEGAPLVLRD" misc_feature complement(775448..776662) /locus_tag="PA0703" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" misc_feature complement(order(775577..775579,775586..775591, 775598..775603,775610..775612,775658..775660, 775670..775672,775682..775687,775844..775846, 775856..775858,775937..775939,775946..775954, 775961..775966,775973..775975,776213..776215, 776222..776227,776234..776236,776294..776296, 776303..776311,776315..776320,776492..776494, 776606..776608,776615..776620,776627..776632)) /locus_tag="PA0703" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340926" gene complement(776787..778181) /locus_tag="PA0704" /db_xref="GeneID:880754" CDS complement(776787..778181) /locus_tag="PA0704" /EC_number="3.5.1.4" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amidase" /protein_id="NP_249395.1" /db_xref="GeneID:880754" /translation="MTALHDLPGTRLLALFARRELSPGEYYEHLLAHIQRWEPHLNAL YRFDPQRVREQAAAATERWRKGQPKGPLDGLPVTIKELIATAGEPIPLGSAATALQPA PCDAPPAARLREAGAIVLAKTTVPDFGMLSSGLSSFHGVTRNPWNLANNTGGSSSGAA AAATAGYGPLHLGTDIGGSVRLPAGWCGLVGFKPSLGRIPIDPYYTGRCAGPMTRCMD DCLLLMRYLAQPDARDATSLPPEVLDWSAEPLSVRGLRVGLQLDPGCGLQPDAEIRAA IEAAARLFEEHGAQLRIVEPLMDRSLLDGLNDFWRARLWSELLLLDETRRARVLPYVH AWAEGGARVSGVDAVRGFNQTFEMRRRAARLFGEIDLLLTPTNQVEAFPADWASPLND PQRPFEHIVFTVPWNMGEQPALSINCGFTAAGMPIGLQLVAPRFADTWLLRIGKTYEG WRGPIHGWPRPPAD" misc_feature complement(776790..778181) /locus_tag="PA0704" /note="amidase; Provisional; Region: PRK07042" /db_xref="CDD:235915" gene complement(778309..779208) /gene="migA" /locus_tag="PA0705" /db_xref="GeneID:878545" CDS complement(778309..779208) /gene="migA" /locus_tag="PA0705" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="alpha-1,6-rhamnosyltransferase MigA" /protein_id="NP_249396.1" /db_xref="GeneID:878545" /translation="MIEEATSSKHSGTTDAPLVSVVAPCFNAEKYLEEALRSIYEQDY PNFEVIIVDDGSTDNSYAMLEQLQKVHGFQLYRQQNQGVSAALNFGLRHARGDYVATP DLDDIMLPHSLSVRAAYLDQHPEVGCVGALVIYIDSEGQETKRQNGNRIRQLDFDYLL GNAYVCGAPVSLYRMEALRAAGFYDPEIKVQDFQMTLRIASQGYQIHKLPVLVTRYRR HPDNLSRRYKVLLDADLRTIAPYQSHPAYERGRTELVNKALKYAVVADKRHAWQLLRS LPLRQWNRTTFRRLKRFLLHHES" misc_feature complement(778516..779163) /gene="migA" /locus_tag="PA0705" /note="Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; Region: WcaA; COG0463" /db_xref="CDD:440231" gene complement(779463..780101) /gene="cat" /locus_tag="PA0706" /db_xref="GeneID:878374" CDS complement(779463..780101) /gene="cat" /locus_tag="PA0706" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="chloramphenicol acetyltransferase" /protein_id="NP_249397.1" /db_xref="GeneID:878374" /translation="MGNYFESPFRGKLLSEQVSNPNIRVGRYSYYSGYYHGHSFDDCA RYLMPDRDDVDKLVIGSFCSIGSGAAFIMAGNQGHRAEWASTFPFHFMHEEPVFAGAV NGYQPAGDTLIGHDVWIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPYAIVGGNPART IRKRFSDGDIQNLLEMAWWDWPLADIEAAMPLLCTGDIPALYRHWKQRQATA" misc_feature complement(779556..779966) /gene="cat" /locus_tag="PA0706" /note="Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and...; Region: LbH_XAT; cd03349" /db_xref="CDD:100040" misc_feature complement(order(779610..779612,779634..779636, 779682..779684,779739..779741,779748..779750, 779754..779756,779835..779837,779841..779843, 779847..779849,779862..779867,779910..779912, 779964..779966)) /gene="cat" /locus_tag="PA0706" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:100040" misc_feature complement(order(779619..779621,779631..779633, 779637..779642,779646..779648,779670..779672, 779685..779690,779739..779741,779748..779750, 779829..779834,779859..779861,779865..779867, 779874..779876,779958..779960,779964..779966)) /gene="cat" /locus_tag="PA0706" /note="active site" /db_xref="CDD:100040" misc_feature complement(order(779829..779834,779874..779876, 779958..779960,779964..779966)) /gene="cat" /locus_tag="PA0706" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100040" misc_feature complement(order(779619..779621,779631..779633, 779637..779642,779646..779648,779670..779672, 779685..779690,779724..779726,779739..779741, 779748..779750,779778..779780,779859..779861, 779865..779867)) /gene="cat" /locus_tag="PA0706" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:100040" gene complement(780194..780973) /gene="toxR" /locus_tag="PA0707" /db_xref="GeneID:880684" CDS complement(780194..780973) /gene="toxR" /locus_tag="PA0707" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator ToxR" /protein_id="NP_249398.1" /db_xref="GeneID:880684" /translation="MTATDRTPPPLKWLCLGNRDANDGFELFAHGIYARNGALVGSKL SLRERRQRVDLSAFLSGAPPLLAEAAVKHLLARLLCVHRHNTDLELLGKNFIPLHASS LGNAGVCERILASARQLQQHQVELCLLLAIDEQEPASAEYLTSLARLRDSGVRIALHP QRIDTDARQCFAEVDAGLCDYLGLDARLLAPGPLTRNLRQRKSIEYLNRLLVAQDIQM LCLNVDNEELHQQANALPFAFRHGRHYSEPFQAWPFSSPAC" misc_feature complement(780230..780910) /gene="toxR" /locus_tag="PA0707" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cl29561" /db_xref="CDD:453023" gene complement(781259..782113) /locus_tag="PA0708" /db_xref="GeneID:877600" CDS complement(781259..782113) /locus_tag="PA0708" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249399.1" /db_xref="GeneID:877600" /translation="MKLSQLGFFCAVVERGTIAAAAEQLHCVPSNITTRLRELEGQLG VALFNRERNRLLVTPEGRLLYRHATRLLALADETAALFAGDQAHGALRVGALDVALAN HLPQRLARYRRESPGVELHIRPEHSLLLERLLMEGELDLIVTDGPIEHPLLASRLAFR ERLLRVTPADLPAPTPEDLAGLELYVFGHTCHYRRQVDRWLAESAIQPRATLEIESYP SLFACIEAGLGFACVPESFVARRPSTRRGFHAEPVAGLDSSDIHFVWRKQQASPLIQG FIDSIGAD" misc_feature complement(781277..782113) /locus_tag="PA0708" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 782229..782525 /locus_tag="PA0709" /db_xref="GeneID:880712" CDS 782229..782525 /locus_tag="PA0709" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249400.1" /db_xref="GeneID:880712" /translation="MTYHVLVQFDVPSDKREAFAAAGLFDANGSLQNEPGTLRFEVIR DENNRNRFYLDEVYEDEAAFLQHCRNETIARFYELIDSYAFGPLFLFKGYRVEG" misc_feature 782235..782489 /locus_tag="PA0709" /note="Quinol monooxygenase YgiN [Energy production and conversion]; Region: YgiN; COG1359" /db_xref="CDD:440970" gene 782570..782965 /gene="gloA2" /locus_tag="PA0710" /db_xref="GeneID:878796" CDS 782570..782965 /gene="gloA2" /locus_tag="PA0710" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="lactoylglutathione lyase" /protein_id="NP_249401.1" /db_xref="GeneID:878796" /translation="MRILHSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFV GYQDERAAAALELTHNWDRDGYTQGDGYGHLAIEVEDAAVTCARARALGYRVTREAGL MQHGRSVIAFLEDPDGYKVELIQKGTQFD" misc_feature 782576..782941 /gene="gloA2" /locus_tag="PA0710" /note="Glyoxalase I that uses Ni(++) as cofactor; Region: GlxI_Ni; cd16358" /db_xref="CDD:319965" misc_feature order(782576..782596,782639..782641,782705..782707, 782726..782737,782765..782776,782780..782803, 782807..782809,782924..782926,782933..782935, 782939..782941) /gene="gloA2" /locus_tag="PA0710" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319965" misc_feature order(782582..782584,782594..782596,782669..782671, 782684..782686,782690..782692,782735..782737, 782741..782743,782747..782749,782789..782791, 782861..782863,782897..782899,782903..782905, 782927..782929,782933..782935) /gene="gloA2" /locus_tag="PA0710" /note="active site" /db_xref="CDD:319965" misc_feature order(782594..782596,782669..782671,782684..782686, 782690..782692,782741..782743,782747..782749, 782861..782863,782897..782899,782903..782905, 782927..782929) /gene="gloA2" /locus_tag="PA0710" /note="glutathione binding site [chemical binding]; other site" /db_xref="CDD:319965" gene complement(783009..783515) /locus_tag="PA0711" /db_xref="GeneID:878381" CDS complement(783009..783515) /locus_tag="PA0711" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249402.1" /db_xref="GeneID:878381" /translation="MNISIRAETPGDIDAIAHLTEAAFRNETHSSHTEQYIVDALRRA GALTLSLVAEANGQVIGHIAASPVTIDGEAGDWYGLAPLSVAPGRQRQGLGSQLVRRL LTELRLLPAGGCVVLGEPTYYSRFGFRVESGLALPGVPAEYFQAQSFSGRMAQGIVAF HAAFDASG" misc_feature complement(783069..783503) /locus_tag="PA0711" /note="Predicted N-acetyltransferase YhbS [General function prediction only]; Region: yhbS; COG3153" /db_xref="CDD:442387" gene complement(783576..783833) /locus_tag="PA0712" /db_xref="GeneID:882261" CDS complement(783576..783833) /locus_tag="PA0712" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249403.1" /db_xref="GeneID:882261" /translation="MNVSKPEQRTLHALAQGGHIAFLRDASGKITRVECYNRDGHLLL DCTLAVFSRLKNKGLVHSRQGRPYRISMAGLKAVRPQADNR" misc_feature complement(783579..783833) /locus_tag="PA0712" /note="Putative toxin of bacterial toxin-antitoxin pair; Region: YjhX_toxin; pfam09857" /db_xref="CDD:430883" gene 784173..784466 /locus_tag="PA0713" /db_xref="GeneID:882235" CDS 784173..784466 /locus_tag="PA0713" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249404.1" /db_xref="GeneID:882235" /translation="MFRTALTLFMSSLAIPAVASMRCGTHLVDEGDSVEQVLERCGQP LSRIVNEPALRNNGVPKLNAARTEFWVYGPSGGVYRHLRFIDGKLVEIRLERK" misc_feature 784224..784451 /locus_tag="PA0713" /note="Protein of unknown function (DUF2845); Region: DUF2845; pfam11006" /db_xref="CDD:431599" gene 784698..785174 /locus_tag="PA0714" /db_xref="GeneID:882257" CDS 784698..785174 /locus_tag="PA0714" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249405.1" /db_xref="GeneID:882257" /translation="MLKLLVVVASLFIGGGMAMGEPGGADGFSAVAAVDPGANPEAQL DEEPQEVSEAPAYRVDDLTFLYLTHEVYLEPYVSCRPKVLGERSYVACWNETYSGRSP LNFWEYDGGDFLALNDPARVLAEGKFASEQRIGEAPLPLPLDIDLDQLERAYSLMM" gene 785498..785570 /gene="phrD" /locus_tag="PA0714.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /db_xref="GeneID:9793389" ncRNA 785498..785570 /ncRNA_class="other" /gene="phrD" /locus_tag="PA0714.1" /product="PhrD" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:9793389" gene 785969..786925 /locus_tag="PA0715" /db_xref="GeneID:879902" CDS 785969..786925 /locus_tag="PA0715" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249406.1" /db_xref="GeneID:879902" /translation="MKKRPLEDLFFAMYRGKQSFEHFANCSVEGLYEPVMVNGRLVYK TDKDLRAYHRFLNKFLFERLPVVDDVVFSYRKGVNAVDAVEKHAGSKFYFQTDLRDFF SSLTKSDVRRTLEWAKDVCVISDLDVWVERILKLVTIGDSLPMGFSTSPAISNACLYS LDGILKTHCLSNGVIYTRYADDLIFSSSNKQALDPLFGVVCRTLQSEFSGRMGINSQK TKYLRKGGKIKLLGLNVLPNGRVTVDMRHKKEIEVRLFYYVKDRARFLKIMGEVDDEK AIKKFSGLINYVNTVDPAYLDKLRKKYGLTIVDMFIHKSPKL" misc_feature 786086..786733 /locus_tag="PA0715" /note="Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a...; Region: RT_Bac_retron_II; cd03487" /db_xref="CDD:239569" misc_feature order(786257..786274,786401..786406,786503..786505, 786509..786514,786659..786664) /locus_tag="PA0715" /note="putative active site [active]" /db_xref="CDD:239569" misc_feature order(786257..786274,786401..786403,786509..786511) /locus_tag="PA0715" /note="putative NTP binding site [chemical binding]; other site" /db_xref="CDD:239569" misc_feature 786404..786406 /locus_tag="PA0715" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:239569" gene 786928..788253 /locus_tag="PA0716" /db_xref="GeneID:882248" CDS 786928..788253 /locus_tag="PA0716" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249407.1" /db_xref="GeneID:882248" /translation="MNFQIVINNIQHIGYAELDVDLNASGIICIVGKNGVGKTTLIKA ILNLKSADTFSRTASPGIFKANSSMRCTYGENSYEFSFDSDINDLNSRSPIPEELKSV IDVELPMPFGQRFNNYQNIMSADMDIRTALILGEYEVPVELISFLSDIYKTNKFNGLV EVSAKGGSYYCIPLDDDRYVREDHLSSGEFFLISLYRKIKGRSKFIVIDEIDISLDAA AQAHLIGWLRRFCTTEQVKVVFTTHSLALMRTLKDGELFYMEESEGKVSVIPSSYNYI KSVLFGFKGWDRYILTEDAMLKSLLEYVLANYCSGLFFSYQIIHVGGGSNVVDLMRQN STEGFFSTPENVISVLDGDQAEYRYARRPNVYCIPFLSVEKAIFAEYKAGRFLPELAP DPRFDTPKNFCSAIGRDRHATEADIIKYLCDSYPTEVRRFAQTLSDFLS" misc_feature 786937..787992 /locus_tag="PA0716" /note="Predicted ATP-dependent endonuclease of the OLD family, contains P-loop ATPase and TOPRIM domains [Replication, recombination and repair]; Region: YbjD; COG3593" /db_xref="CDD:442812" gene 789360..789650 /locus_tag="PA0718" /db_xref="GeneID:880688" CDS 789360..789650 /locus_tag="PA0718" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249409.1" /db_xref="GeneID:880688" /translation="MAASPYYLRQTHAPDCACSVCWSARQVIPLHSPSPCPDCRPPGL PYLEGGRWLCRPRSFCAKHDPSRRPPKYWHVVYDSGKPTPFVPVREAFQLEG" misc_feature 789378..789647 /locus_tag="PA0718" /note="Family of unknown function (DUF5447); Region: DUF5447; pfam17525" /db_xref="CDD:340240" gene 789654..790031 /locus_tag="PA0719" /db_xref="GeneID:882252" CDS 789654..790031 /locus_tag="PA0719" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249410.1" /db_xref="GeneID:882252" /translation="MLAKTLKALLLLCLIQAARTVADPVKGRAPGSSEQPHRSGERKH GRSAPLNASPLKQPPLGSVGQLLRPALPSPRRQERDDKGRALGVALRVPRGSVPLGRR RRRCDRDRSPNGPRRTPVVGLVR" gene 790166..790600 /locus_tag="PA0720" /db_xref="GeneID:877782" CDS 790166..790600 /locus_tag="PA0720" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="helix destabilizing protein of bacteriophage Pf1" /protein_id="NP_249411.1" /db_xref="GeneID:877782" /translation="MNMFATQGGVVELWVTKTDTYTSTKTGEIYASVQSIAPIPEGAR GNAKGFEISEYNIEPTLLDAIVFEGQPVLCKFASVVRPTQDRFGRITNTQVLVDLLAV GGKPMAPTAQAPARPQVQAQAPRPAQQPQGQDKQDKTPDAKA" gene 790617..790709 /locus_tag="PA0721" /db_xref="GeneID:880780" CDS 790617..790709 /locus_tag="PA0721" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249412.1" /db_xref="GeneID:880780" /translation="MLRYLSLFAVGLATGYAWGWIDGLAASLAV" gene 790722..790973 /locus_tag="PA0722" /db_xref="GeneID:880678" CDS 790722..790973 /locus_tag="PA0722" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249413.1" /db_xref="GeneID:880678" /translation="MSGVVAVQVCTAWTSTPEGFMACRELAWQQAYLIPPEAAGYVDI LVNGGFSPEAFGIGAAGVLGSFVTGLLIGWVASLLRKAK" gene 790986..791234 /gene="coaB" /locus_tag="PA0723" /db_xref="GeneID:880778" CDS 790986..791234 /gene="coaB" /locus_tag="PA0723" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phage coat protein B" /protein_id="NP_249414.1" /db_xref="GeneID:880778" /translation="MKAMKQRIAKFSPVASFRNLCIAGSVTAATSLPAFAGVIDTSAV ESAITDGQGDMKAIGGYIVGALVILAVAGLIYSMLRKA" gene 791370..792632 /locus_tag="PA0724" /db_xref="GeneID:880777" CDS 791370..792632 /locus_tag="PA0724" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phage coat protein A" /protein_id="NP_249415.1" /db_xref="GeneID:880777" /translation="MWGLTMKFASLILMLLFATVARAEDYYWKIQSLPERFSSPSAAC AAWAKATGRPGEFTFTGSMKARDQTSFWCEFTNNETGKTAAGYGPAGRYGDSCPEGTE YDKATGVCKSPPQECKEGELFPAKGPDSPVVTSGGRNYVGDGGAPTACYQSCEYGGNP SPASCYLVKGSTTTGFCNYILKGTGQNCGADSYTFSQTGDSLNPPDTPNTDPSDPNDP GCPPGWSWSGTTCVKAPTDPTDPTDPTTPGSDGGGDGNGGGNNNGGGNDGGTGNGGDG SGGGDGNGGGDGSGDGDGSGTGGDGNGTCDPAKENCSTGPEGPGGELKEPTPGTWDDA IATWEKKVEDAKQELKTKVKANVDQMKGAFDLNLAEGGGQLPCESMTIWGKSYSLCIS DYAGQLSSLRVALLLMAALIAALILLKD" gene 792637..792993 /locus_tag="PA0725" /db_xref="GeneID:877789" CDS 792637..792993 /locus_tag="PA0725" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249416.1" /db_xref="GeneID:877789" /translation="MEWLSGFLDQIIAFFQWIWDFFAQGIYDFVRDGLVVATKASMYA ALQTLILLIDVSYTAARELIDSLGVPQMIRSMYAALPGPIAAGLAFFGVPQALNIIMV AAATRFCMRFVPFIGR" misc_feature 792637..792981 /locus_tag="PA0725" /note="Protein of unknown function (DUF2523); Region: DUF2523; cl10291" /db_xref="CDD:447897" gene 792997..794271 /locus_tag="PA0726" /db_xref="GeneID:882269" CDS 792997..794271 /locus_tag="PA0726" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249417.1" /db_xref="GeneID:882269" /translation="MSIKIHHGPNGSYKTSGAIQDDAVPALKDGRVIITNVRGFTLER AYQVFPDLPNTAEIINLDLESLEDLEKMRTWFQWAPRGAFLIFDETQLLFPKSWREKD LERFDYPGGPEAAHAADRPMGWLDAWTRHRHFNWDIVLTTPNISYIRDDIRMTCEMAY KHSNLAVIGIPGRYKEAQHDAQLNRPPADGTIIEYKRIRKQTFALYQSTATGKTQDTK AGKSLFRSPKLVLLLALLAGTIGFVWYMGPLRTIGAPAAATPADAPGDPAQAPAAPAA VAAPTRPAANSFLPPGLVPDGPAAAPVDLNAHPFADRRISILAHAYRKSRGDIYMFAL DDPTGRRLELTSWQLIGSGYRVTPKGECVVELRYEEWKQTVTCTGRQPGAVASIVPAA PVAASADAPARGQSPLTIVPDSEYASRPWRQK" misc_feature 792997..794244 /locus_tag="PA0726" /note="putative assembly protein; Region: PHA00350" /db_xref="CDD:222783" gene 794501..795793 /locus_tag="PA0727" /db_xref="GeneID:880742" CDS 794501..795793 /locus_tag="PA0727" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249418.1" /db_xref="GeneID:880742" /translation="MKKISHQIRVSIESDGQVLESPKGRLFFDDTTAQFTDLSGVRIL RCGVDTVRQLYNGKLRPEVMALFDLSVDVVEFAGYEWSKGRIGRDSGYQYRLQNAEMG LILLIKNHNIKVDTIGSHLKIEVSPHALDGADPRILQGVLDDLAAAVLSHCETNQAAV HIALDVQGWKPPRDLVDRMHCRSRRVRQISGIERIEFDGNASVYGRGETYMFGSANGL QLSIYNKTLQARATDKLDYWESVWATLNGDPFGDGDPAYNPLETVWRLEFRFHHSIVQ QFSEGSRMASGEVIGCRTYEGLCPHLQGLWNYACESFKLLSRTAVYDPFWSLISQDAR VQVECDPLIERTEYRRYYKTAKGFSGRNCEMFLGQFVSLIARERVPAKKAIESARKLE FWHVIEDHYLAKGWTRRDLERHIHKLMCDRYLRRGYAV" gene 795793..796776 /locus_tag="PA0728" /db_xref="GeneID:882014" CDS 795793..796776 /locus_tag="PA0728" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="bacteriophage integrase" /protein_id="NP_249419.1" /db_xref="GeneID:882014" /translation="MSITKLPDGRWFVDVEPIKGKRFRKRFKTKMEAQQFEATARQKC AENPCWTLRPKDRRRLSELVELWYELHGQTLSNGHRCVAILRLVAKDLGDPVAVSLEP AKVARLRSRQIANGMSGKTANNRLGYLKSMYNELRQLGVIDYENPVGRMRPLKLQERP LSYLTKHQVSELLTALDARTTSPHPKMVARICLATGARWGEAQALTPERLKGNTVIFA NTKSKRVRSVPISEELGADLRRHWQTHGPFTNCLGVFRLVLLSTSIKLPKGQASHVLR HTFASHFIMNGGHIVTLQHILGHASLSMTMRYAHLSQDHLSEAVRFNPLIG" misc_feature 795793..796767 /locus_tag="PA0728" /note="DNA breaking-rejoining enzymes, C-terminal catalytic domain; Region: DNA_BRE_C; cl00213" /db_xref="CDD:469662" misc_feature order(796297..796302,796309..796311,796360..796362, 796369..796374,796471..796473,796477..796479, 796483..796485,796624..796629,796636..796641, 796645..796650,796678..796680,796708..796710, 796717..796719) /locus_tag="PA0728" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:271177" misc_feature order(796384..796386,796609..796611,796618..796623, 796714..796716) /locus_tag="PA0728" /note="active site" /db_xref="CDD:271177" gene 797251..797598 /locus_tag="PA0729" /db_xref="GeneID:877701" CDS 797251..797598 /locus_tag="PA0729" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249420.1" /db_xref="GeneID:877701" /translation="MSPVVIRFTDTAEQSIEDQVHHLAPFQGEQAALQSVLSLLDEIE EKISLAPKGYPVSQQASLLGVLSYRELNTGPYRVFYEFHEEQGEVAVILVLRQKQSVE QQLIRYCLVGPIE" misc_feature 797266..797565 /locus_tag="PA0729" /note="Plasmid stabilization system protein ParE [Mobilome: prophages, transposons]; Region: ParE; COG3668" /db_xref="CDD:442885" gene complement(797721..797794) /locus_tag="PA0729.1" /db_xref="GeneID:3240218" tRNA complement(797721..797794) /locus_tag="PA0729.1" /product="tRNA-Gly" /db_xref="GeneID:3240218" gene complement(797925..798827) /locus_tag="PA0730" /db_xref="GeneID:877678" CDS complement(797925..798827) /locus_tag="PA0730" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="(R)-3-hydroxydecanoyl-ACP:CoA transacylase" /protein_id="NP_249421.1" /db_xref="GeneID:877678" /translation="MRPETAIIEIHGQYRIHTEFYGNPAAQQTIILVNGSLSTTASFA QTVKYLQPHYNVVLYDQPYAGQSKPHNENHTPISKECEARILLELIERFRAEVVMSFS WGGVATLLALAQRPGRIRRAVVNSFSPQLNPAMLDYLHRGLDYLAACDRTQIGNLVNE TIGRYLPQLFKRYNFRHVSSLDEHEYHQMHFHIREVLRLNADSYTESFAGIEIPMLFM NGELDIYTTPHEARQFGQLIRGAEFHTIRNAGHFIDVEHKAAWQQTQDALLAFLRPQR TQPLNPIYRPQPNGASVPLAALAS" misc_feature complement(798009..798821) /locus_tag="PA0730" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene complement(799279..800016) /locus_tag="PA0731" /db_xref="GeneID:879770" CDS complement(799279..800016) /locus_tag="PA0731" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249422.1" /db_xref="GeneID:879770" /translation="MPTFLRAALRRLSLAGATLCALASGPVFAMPLPSAKDLQKLAPQ ASLPTLELALTAYACASASQGGDNGLLTVIDYSRPSRDKRLWVFDLKTRKLLFEEWVT HGKNSGDDLATSFSNRPNSYQSSIGLFQTGQLYTGKHGQSLRLVGLEPGFNDKSEERA IVMHSAAYADPRVVPGLGRLGRSQGCPAVRPAVAARLINTLKRGSYVFAYYPQPKWLE TSRFLAPQSCAVARAARTPEVIASLLK" misc_feature complement(799387..799890) /locus_tag="PA0731" /note="L,D-transpeptidase catalytic domain; Region: YkuD_2; pfam13645" /db_xref="CDD:463944" gene complement(800096..801139) /locus_tag="PA0732" /db_xref="GeneID:880615" CDS complement(800096..801139) /locus_tag="PA0732" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249423.1" /db_xref="GeneID:880615" /translation="MKRSLAVLLLAFAVGSLHAAPASPANAPLPPADIKARLKSMKPG EYLWYPEVSPQGPVTIVVSLTEQKAYIYRNGIAIGVSTLSSGKKGRETPTGVFSILQK SVDHKSDLYNSAPMPYMQRLTWDGIALHAGNLPGYPASHGCIRLPMAFAKKLYGITGF SSTTVIISNASSAPKEVDHPGLLAPTVADGRPVTLPVEPGEIAWNDPGAERGPLSVLI SRADQRAYVYRGGQRIGTAPVQLPARPQTGMAVFSLLEKPTPEEISETSPNLRWSVVQ VSNPGQGLTPSEQLGKIRMDPTFVREMLGAMDVGSTLVITDWASTRDTHSDSDFTVIA TETPNNPTKSLKK" misc_feature complement(800135..801139) /locus_tag="PA0732" /note="hypothetical protein; Provisional; Region: PRK06132" /db_xref="CDD:235709" gene complement(801275..801967) /locus_tag="PA0733" /db_xref="GeneID:880710" CDS complement(801275..801967) /locus_tag="PA0733" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="16S rRNA pseudouridine(516) synthase" /protein_id="NP_249424.1" /db_xref="GeneID:880710" /translation="MRLDRFLANLPELSRRDAQMLIAGGHLRVDGQVVRDGTHEVRVF SRVELDERLLQAGKPARYYMLHKPMGCVSATRDPQHPTVLDLFPEDLRDDLHIGGRLD YNTTGLMLLTNDGQWSRRLTLPGSRRDKVYYVETEAPIDQRYVDAFAAGLHFRFEDLV TLPAQLEPIGPRCARLTLHEGRYHQVKRMFGHFDNKVLRLHRERMGDICLDPQLPPGA WRPLNAEEICSV" misc_feature complement(801299..801967) /locus_tag="PA0733" /note="Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605 [Translation, ribosomal structure and biogenesis]; Region: RsuA; COG1187" /db_xref="CDD:440800" gene complement(801967..802239) /locus_tag="PA0734" /db_xref="GeneID:877923" CDS complement(801967..802239) /locus_tag="PA0734" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249425.1" /db_xref="GeneID:877923" /translation="MLASARRALHPGHPPAIHRAMNSEIDPGRCPLCQQSNRCTLAYP TSATQACWCFTTEIDAAVLERIPAELRRRACLCPRCAQLLPPDADD" misc_feature complement(801994..802152) /locus_tag="PA0734" /note="Cysteine-rich CWC; Region: Cys_rich_CWC; pfam14375" /db_xref="CDD:433916" gene complement(802260..803075) /locus_tag="PA0735" /db_xref="GeneID:878402" CDS complement(802260..803075) /locus_tag="PA0735" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249426.1" /db_xref="GeneID:878402" /translation="MNRNRRNALIAGSLLLLAANLAALGGVAWNRSGEAESKLVLSQR ELQRNWSYGFWSEENSGVELRLELRSPSSEPPSDLAPPLPPEQMRALGFSIPDALDEE SVRRYRRQQEKQVLLVLELDGPAYRREVRLAEERLAEARARSKALPKDEMLSSQMEAA RHQLKHEQGEASRLFIVDTGLDLAALRQRYPERQRYAIVKGRVRPWSAVDGGRTLVGG YISRTDLAAINVPRQWHAVFAKVDEQNYRLAPLELHLSFGQRLEPWITNAVRR" misc_feature complement(802281..802997) /locus_tag="PA0735" /note="Domain of unknown function (DUF4824); Region: DUF4824; pfam16106" /db_xref="CDD:435139" gene complement(803072..804148) /locus_tag="PA0736" /db_xref="GeneID:878261" CDS complement(803072..804148) /locus_tag="PA0736" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249427.1" /db_xref="GeneID:878261" /translation="MQPIDRAQAQQRANDILVFQRELQRLDQEQAFRLEPAQARQLAD YHLALLDSYRDRFDIDHDLRSQQLSLGMRVASFFGALAFAASVFLLFYRFWGLFPTVA QVAILIGSAFAAFFATLWVQAKDASGYFSKLAAMVAFACFVLDLTMLGQIFNVTPSDL ALVPWALYALLLAYLCNARLLLAAAILCVMGFIAARVGTWGGGYWLSVGERPENFFPA AALIFAVPLCFDQRNFSGFAVIYRVFALLGLFLPMLVLANWGSGSYLALPSALIEGLY QVAGFVAAALVIWLGARRNWADVSNTGITFFVIFLYTKFFDWWWEAMPKYLFFLVLGL SALLILLVLRRLRTPLGIAARTDA" misc_feature complement(803660..803959) /locus_tag="PA0736" /note="Predicted membrane protein (DUF2157); Region: DUF2157; pfam09925" /db_xref="CDD:430931" gene 804381..804560 /locus_tag="PA0736a" /db_xref="GeneID:17373343" CDS 804381..804560 /locus_tag="PA0736a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719735.1" /db_xref="GeneID:17373343" /translation="MLMVMRLFGLLLAAFLMSGCSVRVPGAYVELDPFDDGYYGYDRG GPPHCPPGHAKKGWC" gene 804656..805111 /locus_tag="PA0737" /db_xref="GeneID:880649" CDS 804656..805111 /locus_tag="PA0737" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249428.1" /db_xref="GeneID:880649" /translation="MWRTFLRVPLLLLLASLGGCAVYDYDYDDGDWRHYRGQPYGYAY EVPRYRVYDDGWRSERRYYSTRYYDQRYYPAPRRYDGHRDYRREQYRYQQRYHESRPA HRGERHPGNWQRGGQPQWRGHSPQRWQQHGRQDRPGHQGQQGGTPRWRN" gene 805228..805473 /locus_tag="PA0738" /db_xref="GeneID:880709" CDS 805228..805473 /locus_tag="PA0738" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249429.1" /db_xref="GeneID:880709" /translation="MSHFLSFAKGALAMFWLVALVNLAYPLGELHRPILLLSGVLVLV HAAEILLLNGRLKARPAPWLERLQVLLFGVLHLRSLG" misc_feature 805234..805404 /locus_tag="PA0738" /note="Protein of unknown function (DUF1145); Region: DUF1145; pfam06611" /db_xref="CDD:429030" gene complement(805788..806702) /locus_tag="PA0739" /db_xref="GeneID:878029" CDS complement(805788..806702) /locus_tag="PA0739" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249430.1" /db_xref="GeneID:878029" /translation="MSDLRQFRHFVALAEHGHYARAAEAVNLSQPALSRSIQALEGQL GCTLVERGSRGVALTAHGRLVLEHARRLLAGHRALHNAVSQLANLDSGELCLGGGPFP AARLLPEALAGFSSAHPRVRVVLLIEDWQTLRQRLLDDAVELFVADIRELQGDPQLRI HPLREYPGVLFCRPGHPLLRLVRPSAEQLADYPLAGPRLPEAVRGDLARLLQREEPLG IQCDDVLMLKGLVGSSELISLAPWDVVAADVEAGRLALLPWPAGAEPARAKGSAYGLV SRAGRSLSPAAAVFVERVLEQDRRFAAT" misc_feature complement(805803..806696) /locus_tag="PA0739" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 806805..808781 /gene="sdsA1" /locus_tag="PA0740" /db_xref="GeneID:882069" CDS 806805..808781 /gene="sdsA1" /locus_tag="PA0740" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="SDS hydrolase SdsA1" /protein_id="NP_249431.1" /db_xref="GeneID:882069" /translation="MSRLLALLALAPLLAGAAETTAPKPPSAFTVEAQRRVEAELPFA DRADFERADRGLIRRPERLLIRNPDGSVAWQLGGYDFLLDGKPRDSINPSLQRQALLN LKYGLFEVAEGIYQVRGFDLANITFIRGDSGWIVVDTLTTPATARAAYELVSRELGER PIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGFMEAAIKENVLAGNAMMRR ATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLDGVPFTFQNT PGTESPAEMNIWLPRQKALLMAENVVGTLHNLYTLRGAEVRDALGWSKYINQALHRFG RQAEVMFAVHNWPRWGNAEIVEVLEKQRDLYGYLHDQTLHLANQGVTIGQVHNRLRLP PSLDQEWYDRGYHGSVSHNARAVLNRYLGYYDGNPATLDPLSPEDSAGRYVEYMGGAE RLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAENAGWRNS YLSAAYELRHGVPRDQPTMKAGSADALAAMDTGLLFDYLGVRLDAGAAEGKALSINLR LPDIGENYLLELKNSHLNNLRGVQSEDAGQTVSIDRADLNRLLLKEVSAVRLVFEGKL KSSGNPLLLGQLFGMLGDFDFWFDIVTPAAKSEG" misc_feature 806865..808754 /gene="sdsA1" /locus_tag="PA0740" /note="Alkyl sulfatase BDS1 and related hydrolases, metallo-beta-lactamase superfamily [Secondary metabolites biosynthesis, transport and catabolism]; Region: BDS1; COG2015" /db_xref="CDD:441618" gene complement(808816..809457) /locus_tag="PA0741" /db_xref="GeneID:877736" CDS complement(808816..809457) /locus_tag="PA0741" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249432.1" /db_xref="GeneID:877736" /translation="MKIALIGATGHVGHYFLNEALQRGHAVTALVRDPSKLAARDGLC VVQADVSDPAQVASAVAGHEVVISAFNGGWGSADLRARHAAGSQAILDGVKRSGVPRL LVLGGAGSLEIAPGQRLVDSPEFPEQWKQGALGAADALDQLRGEQRLDWVFLSPAMLL EPGQRSGKFRLGGDQVLFDAKGESRISLEDLAVAMLDEAEQPRHHRQRFTVAY" misc_feature complement(808819..809454) /locus_tag="PA0741" /note="Putative NADH-flavin reductase [General function prediction only]; Region: YwnB; COG2910" /db_xref="CDD:442154" gene complement(809574..810218) /locus_tag="PA0742" /db_xref="GeneID:878042" CDS complement(809574..810218) /locus_tag="PA0742" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249433.2" /db_xref="GeneID:878042" /translation="MNALLLRYRFRLLFFSTVLFTAILGLPSSTKPRVLGSLLLLVLA GMNTLRRRSPLVYLTAFFGLFSLALYTTADFSSPYSSLPPGLLRGLSLILLYLTLFAA LFRRVTQERPVTHELLYGLCALYLQMALAFALAYYMVEQMQPASFIASHGALGLDTFV YYSLVTLTTVGYGDIQAINPLARLLAGSEGVIGVLFIALAVARSLTLMSDSEEV" misc_feature complement(809589..809849) /locus_tag="PA0742" /note="Ion channel; Region: Ion_trans_2; pfam07885" /db_xref="CDD:462301" gene complement(810275..811171) /locus_tag="PA0743" /db_xref="GeneID:882135" CDS complement(810275..811171) /locus_tag="PA0743" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="NAD-dependent L-serine dehydrogenase" /protein_id="NP_249434.1" /db_xref="GeneID:882135" /translation="MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG ASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSA RKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGRNIFH AGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEV YNPWPGVMENAPASRDYSGGFMAQLMAKDLGLAQEAAQASASSTPMGSLALSLYRLLL KQGYAERDFSVVQKLFDPTQGQ" misc_feature complement(810296..811156) /locus_tag="PA0743" /note="tartronate semialdehyde reductase; Provisional; Region: garR; cl42929" /db_xref="CDD:456274" gene complement(811283..812386) /locus_tag="PA0744" /db_xref="GeneID:878206" CDS complement(811283..812386) /locus_tag="PA0744" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="NP_249435.1" /db_xref="GeneID:878206" /translation="MNVLFEERPSLHGFRIGIATLDAEKSLNALSLPMIEALAAKLDA WAEDAGIACVLLRGNGAKAFCAGGDVRKLVDACREQPGEVPALARRFFADEYRLDYRI HTYPKPFICWAHGYVMGGGMGLMQGAGIRIVTPSSRLAMPEIGIGLYPDVGASWFLAR LPGRLGLFLGLSAAQMNARDALDLDLADRFLLDDQQDALLAGLVQMNWNESPQVQLHS LLRALEHEARGELPEAQLLPRRPRLDALLDQPDLASAWQALVALRDDADPLLARGAKT LAEGCPMTAHLVWQQIERARYLSLAEVFRLEYAMSLNCTRHPDFAEGVRARLIDRDNA PNWHWPQVESIPQAVIEAHFEPTWEGEHPLAGL" misc_feature complement(811325..812341) /locus_tag="PA0744" /note="Enoyl-CoA hydratase/isomerase; Region: ECH_2; pfam16113" /db_xref="CDD:465024" gene complement(812445..813263) /locus_tag="PA0745" /db_xref="GeneID:878156" CDS complement(812445..813263) /locus_tag="PA0745" /EC_number="4.2.1.17" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="NP_249436.1" /db_xref="GeneID:878156" /translation="MNTAVEPYKASSFDLTHKLTVEKHGHTALITINHPPANTWDRDS LIGLRQLIEHLNRDDDIYALVVTGQGPKFFSAGADLNMFADGDKARAREMARRFGEAF EALRDFRGVSIAAINGYAMGGGLECALACDIRIAERQAQMALPEAAVGLLPCAGGTQA LPWLVGEGWAKRMILCNERVDAETALRIGLVEQVVDSGEARGAALLLAAKVARQSPVA IRTIKPLIQGARERAPNTWLPEERERFVDLFDAQDTREGVNAFLEKRDPKWRNC" misc_feature complement(812448..813221) /locus_tag="PA0745" /note="enoyl-CoA hydratase; Provisional; Region: PRK09076" /db_xref="CDD:236373" misc_feature complement(order(812817..812819,812826..812831, 812895..812903,812907..812909,813024..813038, 813048..813050,813147..813149)) /locus_tag="PA0745" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(812895..812897,813030..813032)) /locus_tag="PA0745" /note="oxyanion hole (OAH) forming residues [active]" /db_xref="CDD:119339" misc_feature complement(order(812688..812690,812697..812699, 812730..812732,812739..812744,812748..812753, 812757..812762,812775..812780,812784..812792, 812796..812798,812814..812825,812859..812870, 812931..812933,812955..812957)) /locus_tag="PA0745" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene complement(813329..814492) /locus_tag="PA0746" /db_xref="GeneID:879393" CDS complement(813329..814492) /locus_tag="PA0746" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_249437.1" /db_xref="GeneID:879393" /translation="MDFDLTEEQRLLVESARAFARHELAPKAADWDRDHHFPVEVIRA AAEQGYLGLYIAEEDGGLGLSRLSTSLIFEQLAAGCVATTAYISIHNMAAWMLASFGD AALKEAWLPGLIGGESLASYCLTEPDAGSDAARLRTRARREGDEYVLDGSKCFISGAG STQVLIVMARTGEDGARGISCFLVPADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIP AGNRIGPEGQGFVYAMKGLDGGRLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATF QALQFKLADMLTELTASRQMVRLGAHRLDRGDAEATLYCAMAKRFATDRCFDVCNEAL QLHGGYGYLNDYPLERWVRDTRVHQILEGTNEIMRVIVARRLLEQGGMLDRLL" misc_feature complement(813356..814480) /locus_tag="PA0746" /note="Isobutyryl-CoA dehydrogenase; Region: IBD; cd01162" /db_xref="CDD:173851" misc_feature complement(order(813407..813412,813557..813559, 813563..813565,813770..813772,813779..813784, 813803..813805,814100..814102,814217..814219, 814229..814231)) /locus_tag="PA0746" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:173851" misc_feature complement(order(813395..813397,813401..813403, 813422..813424,813896..813898,814022..814024, 814028..814030,814100..814105,814118..814123, 814127..814129)) /locus_tag="PA0746" /note="FAD binding site [chemical binding]; other site" /db_xref="CDD:173851" misc_feature complement(813407..813409) /locus_tag="PA0746" /note="catalytic base [active]" /db_xref="CDD:173851" gene complement(814504..816012) /locus_tag="PA0747" /db_xref="GeneID:882095" CDS complement(814504..816012) /locus_tag="PA0747" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase" /protein_id="NP_249438.1" /db_xref="GeneID:882095" /translation="MAKAIPQLIDGEWRGSRSRELVEVTDPATQDVLALAPKATADEI EQAIASAQRAFETWREVPAPERARLMLRYQHLLKEHHDELGELLARETGKNLADAKGD VWRGIEVVEHAANVASLMMGETVENVAREIDTASWIQPLGVCAGITPFNFPAMIPLWM FPLAIACGNTFVLKPSEQDPLTPNRLAELFLEAGAPKGVLQVIHGGREQVDALLTHPD IRAISFVGSVAVGQHVYRTGTAHLKRVQAFAGAKNHMVILPDANKAQVLGNLVGASCG AAGQRCMAISAAVFVGAAREWIPELAERMAVLRPGHWQDPDAAYGPLISPQARQRVLR LIAEGKAEGAECLLDGSQCQVEGYPNGNWLGPTLFRAVTPKMGLYREEIFGPVLACLE VESLEEAIALVNANPYGNGTSLFTRSGGAARRYQHAVQVGQVGINVPIPVPLPFFSFT GWKGSFYGDLHAYGKQAVRFYTETKTVTSRWFDDEPTTDESSAGPNMTIHLK" misc_feature complement(814570..816000) /locus_tag="PA0747" /note="Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2; Region: ALDH_F6_MMSDH; cd07085" /db_xref="CDD:143404" misc_feature complement(order(814570..814575,814579..814596, 814615..814617,814657..814659,814663..814665, 814675..814677,814702..814713,814717..814719, 814723..814728,814735..814737,814744..814749, 814753..814758,814762..814764,815281..815283, 815287..815289,815296..815298,815305..815307, 815317..815319,815596..815598,815605..815607, 815614..815616,815629..815652,815677..815682, 815689..815691,815788..815790,815800..815802, 815809..815811,815821..815823,815827..815829)) /locus_tag="PA0747" /note="tetrameric interface [polypeptide binding]; other site" /db_xref="CDD:143404" misc_feature complement(order(814783..814785,814861..814863, 814867..814869,815167..815169,815263..815271, 815323..815325,815332..815343,815392..815394, 815482..815484,815491..815493,815536..815538, 815560..815571)) /locus_tag="PA0747" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:143404" misc_feature complement(order(815167..815169,815176..815178, 815269..815271,815560..815562)) /locus_tag="PA0747" /note="catalytic residues [active]" /db_xref="CDD:143404" gene 816105..817025 /locus_tag="PA0748" /note="transcriptional regulator" /pseudo /db_xref="GeneID:879324" /db_xref="PseudoCap:PA0748" gene 817082..817903 /locus_tag="PA0749" /db_xref="GeneID:879353" CDS 817082..817903 /locus_tag="PA0749" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249440.1" /db_xref="GeneID:879353" /translation="MRKPLSLYHPWLYWLRVWQRRLWRHCRWRLGGRRYVRLPSVDER LPYRYIKHTSKLIRRLGDSDLALQRNKVVNLRLAVDCMNGVSIGPGEYFSFCRLVGRP SARRGFVEGMELSFGEARSGIGGGICQLSNLIHWMALHSPLRVVERANHSFDPFPDEG RILPFGSGAAIFYNFIDLVLHNPTADTFQLRFHIAAHQLEGELLCSAPRPVRYHVYER AQRFVRDGDAVLRLNEIWRDIREKGQAGTLLASECLYRNRVRVKYPVEEARLSRD" misc_feature <817124..817750 /locus_tag="PA0749" /note="Vancomycin resistance protein YoaR (function unknown), contains peptidoglycan-binding and VanW domains [Defense mechanisms]; Region: YoaR; COG2720" /db_xref="CDD:442033" gene 818003..818698 /gene="ung" /locus_tag="PA0750" /db_xref="GeneID:881872" CDS 818003..818698 /gene="ung" /locus_tag="PA0750" /EC_number="3.2.2.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="uracil-DNA glycosylase" /protein_id="NP_249441.1" /db_xref="GeneID:881872" /translation="MTDNDDRIKLEASWKEALREEFDKPYMKQLGEFLRQEKAAGKVI FPPGPLIFNALNTTPLENVKVVIIGQDPYHGPGQAHGLCFSVQPGVPTPPSLQNIYKE LNRDLNIPIPNNGYLQRWAEQGVLLLNTSLTVEQAKAGSHANAGWQPFTDRVIEVVNE RCERLVFLLWGSHAQSKQKLIDPQRHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQ NGKTPIDWSLPDL" misc_feature 818024..818680 /gene="ung" /locus_tag="PA0750" /note="Uracil-DNA glycosylase [Replication, recombination and repair]; Region: Ung; COG0692" /db_xref="CDD:440456" gene complement(818825..819862) /locus_tag="PA0751" /db_xref="GeneID:880746" CDS complement(818825..819862) /locus_tag="PA0751" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249442.1" /db_xref="GeneID:880746" /translation="MPERVTWRLYWATPLVGALGGWLASLVGWPLPWMIGSLLAVMLV RCLADLPLAEVPGARKCGQWIVGIGIGLHFTPAVIEQVLAHSVIIVFGAVATTLSSVL AIAFMRRSGEDRATAFFASMPGGASEMVNLGQRHGAVLSRVAAAQSLRLLLVVLLVPA AFQYLLGGGQPGPHQAAPVDWHWLALLFPAGALVALGWQKLRQPNPWLLGPLLLAAGV SLGFDLHIGLPAGSSGVGQWLIGSALGCHFNRSFFRSAPAFVSRTLVCTLWMMFAAAL AAELLGWLTTLDHQSLMLGMMPGGIAELSLTAEALQLSVPLVTALQVLRLLLVLFLAE PCFRYWRKRAG" misc_feature complement(818903..819844) /locus_tag="PA0751" /note="Uncharacterized membrane protein AbrB, regulator of aidB expression [General function prediction only]; Region: AbrB; COG3180" /db_xref="CDD:442413" gene complement(819855..821372) /locus_tag="PA0752" /db_xref="GeneID:881989" CDS complement(819855..821372) /locus_tag="PA0752" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249443.1" /db_xref="GeneID:881989" /translation="METLNYLGQGFGVAMTPTNLITALIGTLIGTIVGLLPGLGPING VALLIPVAFALGLPPETALILLAAVYLGCEYGGRISSILLNIPGEASTVMTTLDGYPM ARKGLAGVALSLSAWSSFIGAFIATCGMVLFAPLLAKWAIAFGPAEYFVLMVFAIVCL GGMAGDRPLKTLLAALLGLFLSSVGIDANSGVYRFTGDSIHLADGIQFVVLVLGLFSV SEILLLLEKTHHGQEAVKATGRMLFNFKEAASVLLVNLRCGLLGFVMGVLPGAGATLA SAVAYMTEKKLAGAKGEFGKGDMRGLAAPETAIGASACGAMVPMLTLGVPGSGTTAVM IGALTLYNITPGPLLFQQQPDIVWGLIASLFIANVMLIILNVPMVRVFTRILAVPNWA LVPAIAIITGIGVYGVHATTFDLFLMVGIGVIGYILRKLDFPLSPLLLGFILGGLMEQ NLRRALSISNGELGILWSSPISLVTWALVVVMLLLPLVRAWRRRVARRATGLADA" misc_feature complement(819942..821372) /locus_tag="PA0752" /note="TctA family transporter [General function prediction only]; Region: COG3333" /db_xref="CDD:442562" gene complement(821383..821853) /locus_tag="PA0753" /db_xref="GeneID:877594" CDS complement(821383..821853) /locus_tag="PA0753" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249444.1" /db_xref="GeneID:877594" /translation="MTRSNLYQRLFAGLWLLTCVGLAVAGWRYQAPFSYEPVGPRAYP LLCLALMGAGLAWLIARPTPIRHAEDEQPLGGAVLLKVLACIALLLVFAGLFETLGFI LSAALVGSCMAILYGARPIPAVVTASLLGIGLYWLFDRALDVPLPLGVLDFLPL" misc_feature complement(821416..821808) /locus_tag="PA0753" /note="Tripartite tricarboxylate transporter TctB family; Region: TctB; pfam07331" /db_xref="CDD:462147" gene complement(821902..822885) /locus_tag="PA0754" /db_xref="GeneID:882147" CDS complement(821902..822885) /locus_tag="PA0754" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249445.1" /db_xref="GeneID:882147" /translation="MMMKLSFRPLALVAAGLLLAGAAVAEPKRPECIAPASPGGGFDL TCKLAQSALVEAKLLSKPMRVTYMPGGVGAVAYNAVVAQRPGDAGTITAFSSGSLLNL AQGKFGRFDENAVKWLAAIGTSYGAIAVRTDSPYKNLDDLVKALKADPSKVVIGSGGT VGSQDWMQTALIAKAAGINPRDLRYVALEGGGEIATALLGGHIQVGSTDISDSMPHIL SGDMRLLAVFSEERLPEAAMANIPTAKEQGYDIVWPVVRGFYLGPKVSDEDYAWWKNA FDQLLASEDFAKLRDQRELFPFAMTGEELDGYVKQQVQQYKQLAKDFGLIQ" misc_feature complement(821968..822807) /locus_tag="PA0754" /note="Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold; Region: PBP2_Bug_TTT; cd07012" /db_xref="CDD:270234" misc_feature complement(order(822121..822123,822259..822261, 822391..822396,822760..822768,822778..822780)) /locus_tag="PA0754" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270234" gene complement(822915..824198) /gene="opdH" /locus_tag="PA0755" /db_xref="GeneID:882059" CDS complement(822915..824198) /gene="opdH" /locus_tag="PA0755" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cis-aconitate porin OpdH" /protein_id="NP_249446.1" /db_xref="GeneID:882059" /translation="MSTSLPQAARSVRSSRSTTLTTTAVVLAGIAPLGNAAGFLEDSK ASLETRNFYMNRDFRDGPGQSKREEWAQGFILNLQSGYTQGTVGFGLDAMGMLGVKLD SGRGRSGTGLLPKDSDGRAPDTYSKLGLTAKVKVSQSELKVGTLIPKLPSVQPNNGRI FPQIFEGALLTSKEIKDLGFTAGRLEKTKIRDSSDSEDLALNDKNGRFAGVSADHFDL GGLDYKLTDQLTASYHYSNLQDVYRQHFVGLLHSWPIGPGELTSDLRFARSTDSGSAK AGGIDNKSLNGMFTYSLGNHAFGAAWQRMNGDDAFPYLEGSNPYLVNFVQVNDFAGPK ERSWQLRYDYDFVGLGIPGLTFMTRYVKGDNVELAGQSGEGREWERNTELQYVFQSGA LKNLGIRWRNATFRSNFTRDIDENRLIVSYTLPIW" misc_feature complement(822924..824090) /gene="opdH" /locus_tag="PA0755" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene 824409..825080 /locus_tag="PA0756" /db_xref="GeneID:877615" CDS 824409..825080 /locus_tag="PA0756" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_249447.1" /db_xref="GeneID:877615" /translation="MRILLVEDHPQLAESVVQALKGAGWTVDLLQDGVAADLALASEE YALAILDVGLPRMDGFEVLARLRGRGKTLPVLMLTARGEVKDRVHGLNLGADDYLAKP FELSELEARVKALLRRSVLGGEQLQRCGALVYDLGTRRFSLDEQPLTLTSREQAVLEA MIARPGRVMSKEQLAAQVFGLDEEASADAIEIYVHRLRKKLEGGAVRIVTFRGLGYLL EAQGD" misc_feature 824409..825071 /locus_tag="PA0756" /note="transcriptional regulator TctD; Region: PRK15479" /db_xref="CDD:185376" gene 825073..826455 /locus_tag="PA0757" /db_xref="GeneID:880811" CDS 825073..826455 /locus_tag="PA0757" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_249448.1" /db_xref="GeneID:880811" /translation="MTDAGSLRGRLLLWLALLLLLVLLASGLSAYWNGREVADTAYDR TLLASARAIADGLYEKDGTLRADVPYVALDTFAYDSAGRIFYQVNDIHGRMISGYENL PAAPADTLRTDDYPALAKFYDGVYQGVDVRVVSLLQPVSEPSMSGMAEIRVAETEGAR ERMARSLMTDTLLRLGVLGVGALVLVWLAVSAALRPLDRLRREVEERQPDDLRPLPML EVQHELRPLVESLNHFTQRLRSLFERQSHFIADAAHELRTPLAALKARLELGLREQEP EAWRSTLETTAKNTDRLIHLANQLLSLARIESGAQAIAEGGAERIDLTALARELGLAL APLAYARGASLALESAGPVWIQGEPTLLNELLSNLLDNALAHTPQGGNVILRVLEGGV LEVEDDGPGIPAADRERVFQRFYRRGDSPGSGLGLAIVGEVCRAHRAQIQLDQGELGG LLVRVRFPVE" misc_feature 825160..825573 /locus_tag="PA0757" /note="Two-component sensor kinase N-terminal; Region: 2CSK_N; pfam08521" /db_xref="CDD:430051" misc_feature 825523..826452 /locus_tag="PA0757" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: BaeS; COG0642" /db_xref="CDD:440407" gene complement(826463..827299) /locus_tag="PA0758" /db_xref="GeneID:879467" CDS complement(826463..827299) /locus_tag="PA0758" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249449.1" /db_xref="GeneID:879467" /translation="MSKLADKVQQDLIRAIDQDELVLPTLPEVALQVREAAEDPDVSI QALSKVIGNDAALTARIIRVVNSPLLRSPKEITDLQMAISRLGINYTCNLATGLAMEQ MFQATTDVVDRKMREVWNKSTEIAGICHVLARHYTRLAPDQATLAGLVHQIGVLPILT YAEDHNELLSDSISLSHVIERIHPLIGERILKAWDFPAPIAEVPRQHLDFARNSPRAD YTDLVQVATLQSYLGSEHPYTRLDWSQIPAFAKLGLEPTVDMKEDEDLSSALEAATSM LQ" misc_feature complement(826622..827260) /locus_tag="PA0758" /note="HD-like signal output (HDOD) domain, no enzymatic activity [Signal transduction mechanisms]; Region: HDOD; COG1639" /db_xref="CDD:441246" gene complement(827400..828344) /locus_tag="PA0759" /db_xref="GeneID:878414" CDS complement(827400..828344) /locus_tag="PA0759" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249450.1" /db_xref="GeneID:878414" /translation="MADPAFHTPLVHEGILAVRGPDAAKFLQGQLTCNLAYLNDETSS LGGRCNIKGRLLSSFRILPEGDGLLLAMAGELLEAQLADLKKYAVFSKASLADESAAW LRIGLRDASEALRALGIDTPAESGRIARHGDLLAVALGDGRVELWVPAQRAEAVLATL REHSREAPLDDWLLGQVRAGIGQVFGATRELFIPQMINLQAVGGVSFKKGCYTGQEIV ARMQYLGRLKRRLYRLALDADEVPAPGTGLFSPVHSTSVGEVVLAARTPENSVELLAV LQDDAVADGRISLGSAEGAPLVLLNLPYTLDSDREIQR" misc_feature complement(827421..828341) /locus_tag="PA0759" /note="Folate-binding protein YgfZ, synthesis and repair of Fe-S clusters [Posttranslational modification, protein turnover, chaperones]; Region: YgfZ; COG0354" /db_xref="CDD:440123" gene 828617..828871 /locus_tag="PA0760" /db_xref="GeneID:880656" CDS 828617..828871 /locus_tag="PA0760" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249451.1" /db_xref="GeneID:880656" /translation="MADETELKRLYWHSRRGMLELDVLLVPFVQEVYPGLDAEDQARF RKLLECEDQDMFGWFMQRGEPEDADLRRMVRMILDRVQPD" misc_feature 828617..828868 /locus_tag="PA0760" /note="Succinate dehydrogenase flavin-adding protein, antitoxin component of the CptAB toxin-antitoxin module [Posttranslational modification, protein turnover, chaperones]; Region: SdhE; COG2938" /db_xref="CDD:442181" gene complement(829276..830892) /gene="nadB" /locus_tag="PA0761" /db_xref="GeneID:882067" CDS complement(829276..830892) /gene="nadB" /locus_tag="PA0761" /EC_number="1.4.3.16" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="L-aspartate oxidase" /protein_id="NP_249452.1" /db_xref="GeneID:882067" /translation="MSQHYQHDVLVIGSGAAGLSLALTLPEHLRIAVLSKGELSQGST YWAQGGVAAVLDDTDTVESHVEDTLVAGGGLCREDAVRFTVEHSREAIQWLIEQGVPF TRDEQHNHEEGSFEYHLTREGGHSHRRIIHAADATGAAIFNTLLAQARRRPNIELLSQ RVAVDLITERKLGLPSKRCLGAYVLNRESGEVDTFRARFSVLASGGASKVYLYTSNPD GNSGDGIAMAWRAGCRVGNLEFNQFHPTCLYHPQAKSFLITEALRGEGALLRLPNGER FMPRFDPRGELAPRDIVARAIDHEMKRLGIDCVYLDISHKPAEFIKAHFPTVYERCLD FGIDITQQPIPVVPAAHYTCGGVLVDQHGHTDVPGLYAIGETTFTGLHGANRMASNSL LECFVYARSAAADMLQRLPGTPVPESLPSWDASQVTDSDEDVIIAHNWDELRRFMWDY VGIVRTNKRLQRAQHRVRLLLSEIDEFYSNYKVSRDLIELRNLALVAELIIRSAMQRR ESRGLHYTLDYPDLLPEARDTILVPPIYGD" misc_feature complement(829285..830892) /gene="nadB" /locus_tag="PA0761" /note="L-aspartate oxidase; Provisional; Region: PRK09077" /db_xref="CDD:236374" protein_bind complement(829725..829737) /gene="nadB" /locus_tag="PA0761" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 831301..831882 /gene="algU" /locus_tag="PA0762" /db_xref="GeneID:882125" CDS 831301..831882 /gene="algU" /locus_tag="PA0762" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor AlgU" /protein_id="NP_249453.1" /db_xref="GeneID:882125" /translation="MLTQEQDQQLVERVQRGDKRAFDLLVLKYQHKILGLIVRFVHDA QEAQDVAQEAFIKAYRALGNFRGDSAFYTWLYRIAINTAKNHLVARGRRPPDSDVTAE DAEFFEGDHALKDIESPERAMLRDEIEATVHQTIQQLPEDLRTALTLREFEGLSYEDI ATVMQCPVGTVRSRIFRAREAIDKALQPLLREA" misc_feature 831301..831879 /gene="algU" /locus_tag="PA0762" /note="RNA polymerase sigma factor AlgU; Provisional; Region: algU; PRK11923" /db_xref="CDD:171347" gene 831914..832498 /gene="mucA" /locus_tag="PA0763" /db_xref="GeneID:879357" CDS 831914..832498 /gene="mucA" /locus_tag="PA0763" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="sigma factor AlgU negative regulator MucA" /protein_id="NP_249454.1" /db_xref="GeneID:879357" /translation="MSREALQETLSAVMDNEADELELRRVLAACGEDAELRSTWSRYQ LARSVMHREPTLPKLDIAAAVSAALADEAAPPKAEKGPWRMVGRLAVAASVTLAVLAG VRLYNQNDALPQMAQQGTTPQIALPQVKGPAVLAGYSEEQGAPQVITNSSSSDTRWHE QRLPIYLRQHVQQSAVSGTESALPYARAASLENR" misc_feature 831917..832447 /gene="mucA" /locus_tag="PA0763" /note="negative regulator of sigma E activity [Signal transduction mechanisms]; Region: RseA; COG3073" /db_xref="CDD:442307" gene 832507..833457 /gene="mucB" /locus_tag="PA0764" /db_xref="GeneID:882064" CDS 832507..833457 /gene="mucB" /locus_tag="PA0764" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="sigma factor AlgU regulator MucB" /protein_id="NP_249455.1" /db_xref="GeneID:882064" /translation="MRTTSLLLLLGSLMAVPATQAADASDWLNRLAEADRQNSFQGTF VYERNGSFSTHEIWHRVESDGAVRERLLQLDGARQEVVRVDGRTQCISGGLADQLADA QLWPVRKFDPSQLASWYDLRLVGESRVAGRPAVVLAVTPRDQHRYGFELHLDRDTGLP LKSLLLNEKGQLLERFQFTQLNTGAAPAEDQLQAGAECQVVGPAKADGEKTVAWRSEW LPPGFTLTRSFMRRSPVTPDPVACLTYGDGLARFSVFIEPLHGAMVGDARSQLGPTVV VSKRLQTDDGGQMVTVVGEVPLGTAERVALSIRPEAAAQK" misc_feature 832549..833442 /gene="mucB" /locus_tag="PA0764" /note="negative regulator of sigma E activity [Signal transduction mechanisms]; Region: RseB; COG3026" /db_xref="CDD:442262" gene 833454..833909 /gene="mucC" /locus_tag="PA0765" /db_xref="GeneID:877954" CDS 833454..833909 /gene="mucC" /locus_tag="PA0765" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="positive regulator for alginate biosynthesis MucC" /protein_id="NP_249456.1" /db_xref="GeneID:877954" /translation="MIEEQGRVVATEPGAVWVETVRRSTCSSCSANAGCGQGLMQRLG VGAGRARVRALSDLSLRVGDAVVLGIHEDLLLRASVLFYLFPLLGFFVAALLATRAGL VEPLIIVSGLAGLLAAWLLVRRHARRHADDPASQPVVLRALISGPSDSA" misc_feature 833454..833882 /gene="mucC" /locus_tag="PA0765" /note="positive regulator of sigma E activity [Signal transduction mechanisms]; Region: RseC; COG3086" /db_xref="CDD:442320" gene 833949..835373 /gene="mucD" /locus_tag="PA0766" /db_xref="GeneID:879207" CDS 833949..835373 /gene="mucD" /locus_tag="PA0766" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="serine protease MucD" /protein_id="NP_249457.1" /db_xref="GeneID:879207" /translation="MHTLKRCMAAMVALLALSLAMTARAELPDFTPLVEQASPAVVNI STRQKLPDRAMARGQLSIPDLEGLPPMFRDFLERSIPQVPRNPRGQQREAQSLGSGFI ISNDGYILTNNHVVADADEILVRLSDRSEHKAKLIGADPRSDVAVLKIEAKNLPTLKL GDSNKLKVGEWVLAIGSPFGFDHSVTAGIVSAKGRSLPNESYVPFIQTDVAINPGNSG GPLLNLQGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVADQLKKAGKVSRGWLGVVI QEVNKDLAESFGLDKPSGALVAQLVEDGPAAKGGLQVGDVILSLNGQSINESADLPHL VGNMKPGDKINLDVIRNGQRKSLSMAVGSLPDDDEEIASMGAPGAERSSNRLGVTVAD LTAEQRKSLDIQGGVVIKEVQDGPAAVIGLRPGDVITHLDNKAVTSTKVFADVAKALP KNRSVSMRVLRQGRASFITFKLAE" misc_feature 834030..835358 /gene="mucD" /locus_tag="PA0766" /note="periplasmic serine protease, Do/DeqQ family; Region: degP_htrA_DO; TIGR02037" /db_xref="CDD:273938" gene 835523..837322 /gene="lepA" /locus_tag="PA0767" /db_xref="GeneID:881998" CDS 835523..837322 /gene="lepA" /locus_tag="PA0767" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="elongation factor 4" /protein_id="NP_249458.1" /db_xref="GeneID:881998" /translation="MSDLSHIRNFSIIAHIDHGKSTLADRFIQMCGGLSDREMEAQVL DSMDLERERGITIKAHSVTLHYKAQDGKTYQLNFIDTPGHVDFTYEVSRSLAACEGAL LVVDAGQGVEAQSVANCYTAIEQGLEVMPVLNKMDLPQAEPERVKEEIESIIGIDATD AVACSAKSGMGVLEVLERLVTAIPAPEGEIEAPLQALIIDSWFDNYLGVVSLVRVKNG RVKKGDKILVKSTGKVHQVDSVGVFTPKHTETVDLKAGEVGFIIAGIKDIHGAPVGDT LTLNNTPDVEVLPGFKRVKPQVYAGLFPVSSDDFEDFRDALQKLTLNDSSLQYEPESS EALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVVFEIVQKNGEIIYVDNPSK LPDLASIQEMREPICRATILVPKDHLGNVITLCIEKRGVQRDMHFLSGQVQVVYDLPM NEVVLDFFDRLKSTSRGYASLDYSFDRFEPSNLVRLDVLINGEKVDALALIVHRDNAP YKGRQLVEKMKELIPRQMFDVAIQAAIGGQIIARSTVKALRKNVLAKCYGGDVSRKRK LLEKQKAGKKRMKQVGSVEIPQEAFLAVLKVDS" misc_feature 835526..837316 /gene="lepA" /locus_tag="PA0767" /note="Translation elongation factor EF-4, membrane-bound GTPase [Translation, ribosomal structure and biogenesis]; Region: LepA; COG0481" /db_xref="CDD:440249" gene 837328..838182 /gene="lepB" /locus_tag="PA0768" /db_xref="GeneID:882104" CDS 837328..838182 /gene="lepB" /locus_tag="PA0768" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="signal peptidase I" /protein_id="NP_249459.1" /db_xref="GeneID:882104" /translation="MTLNFPLLLVIAVAVCGALALVDLVLFAPRRRAAISSYEGQVNE PDPAVLEKLNKEPLLVEYGKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLEVGDFIL VNKFAYGIRLPVLDTKVIPIGDPQRGDVMVFRYPSEPNINYIKRVVGLPGDTVRYTKE KRLYVNGELVAEKLVGEEPGTLGSVTLYQEKLGQAEHLIRKEMSRYRIEPDRQWTIPA GHYFMMGDNRDNSNDSRYWNDPKIPKDLLGMVPDRNIVGKAFAVWMSWPDPKMSNLPN FSRVGVIH" misc_feature 837328..838179 /gene="lepB" /locus_tag="PA0768" /note="signal peptidase I; Region: PRK10861" /db_xref="CDD:182787" gene 838351..838728 /locus_tag="PA0769" /db_xref="GeneID:879500" CDS 838351..838728 /locus_tag="PA0769" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249460.1" /db_xref="GeneID:879500" /translation="MRFARSQKGMSLLGWLVVLGVVAFFASAAFKIIPHYMDYYSLEK VITSVETDKAAEVRSVPEFYSYVGKGMQINGIRNLDLEKALEVQLEDNQFRAHLKYEK REPLISNIDLVVHFDKEFRVRMP" misc_feature 838441..838698 /locus_tag="PA0769" /note="Domain of unknown function (DUF4845); Region: DUF4845; pfam16137" /db_xref="CDD:435163" gene 838725..839414 /gene="rnc" /locus_tag="PA0770" /db_xref="GeneID:882139" CDS 838725..839414 /gene="rnc" /locus_tag="PA0770" /EC_number="3.1.26.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribonuclease III" /protein_id="NP_249461.1" /db_xref="GeneID:882139" /translation="MSNSLDRLERKLGYTFKDRDLMVLALTHRSYAGRNNERLEFLGD AILNFVIGEALFHHFPQAREGQLSRLRARLVKGETLALLARGFEVGDYLRLGSGELKS GGFRRESILADAMEALIGAIYLDTGMDSARERIIAWLGPQLRELTPVDTNKDPKTRLQ EFLQSRGCDLPRYEVVDIQGEPHCRTFFVDCEVALLSDKTHGHGGSRRIAEQVAAAAA LVALGVENGHD" misc_feature 838728..839360 /gene="rnc" /locus_tag="PA0770" /note="dsRNA-specific ribonuclease [Transcription]; Region: Rnc; COG0571" /db_xref="CDD:440336" gene 839407..840324 /gene="era" /locus_tag="PA0771" /db_xref="GeneID:879487" CDS 839407..840324 /gene="era" /locus_tag="PA0771" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="GTPase Era" /protein_id="NP_249462.1" /db_xref="GeneID:879487" /translation="MTDMHDDIPAGSRCGYVAIVGRPNVGKSTLLNHILGQKLAITSR KPQTTRHNMLGIKTEGEVQAVYVDTPGLHKSGEKALNRYMNRTASAALKDVDVVIFVV DRTRWTEEDQMVLERVQYVSCPVLIAVNKTDRIEEKADLLPHLEWLTQQLPKAEVVPI SAQHGTNLDVLEKLVAERLPESEHFFPEDQITDRSSRFLAAELVREKIMRQLGAELPY QITVEIEEFKQEGRILHIHALILVEREGQKKIIIGDKGERIKSIGQNARKDMEVLFDS KVMLNLWVKVKGGWSDDERALRSLGYGDL" misc_feature 839443..840312 /gene="era" /locus_tag="PA0771" /note="GTPase Era, involved in 16S rRNA processing [Translation, ribosomal structure and biogenesis]; Region: Era; COG1159" /db_xref="CDD:440773" gene 840385..841086 /gene="recO" /locus_tag="PA0772" /db_xref="GeneID:878213" CDS 840385..841086 /gene="recO" /locus_tag="PA0772" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA repair protein RecO" /protein_id="NP_249463.1" /db_xref="GeneID:878213" /translation="MSFAAAQATYVLHSRPYKETSALVDFFTPLGRLRAVLRGARGKA GALARPFVPLEAEWRGRGELKTVARLESAGVPNLLNGQALFSGLYLNELLIRLLPAED PQPEIFAHYAATLPLLAAGRPIEPLLRAFEWRLLEQLGYGFALDVDIDGRPIEPQALY QLLPEAGLEPVAQLQPGLFQGSELLSMADADWSAPGALAAAKRLMRQALAPHLGGRPL VSRELFMNRKESPRD" misc_feature 840385..841059 /gene="recO" /locus_tag="PA0772" /note="Recombinational DNA repair protein RecO (RecF pathway) [Replication, recombination and repair]; Region: RecO; COG1381" /db_xref="CDD:440991" gene 841079..841825 /gene="pdxJ" /locus_tag="PA0773" /db_xref="GeneID:878131" CDS 841079..841825 /gene="pdxJ" /locus_tag="PA0773" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="pyridoxine 5'-phosphate synthase" /protein_id="NP_249464.1" /db_xref="GeneID:878131" /translation="MTEATRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADG ITVHLREDRRHIQERDVRVLKEVLQTRMNFEMGVTEEMLAFAEEIRPAHSCLVPERRE ELTTEGGLDVAGQEQRIRDAVRRLAAVGSEVSLFIDPDPRQIEASARVGAPAIELHTG RYADAEDPEEQARELQRVREGVALGRSLGLIVNAGHGLHYHNVEPVAAIDGINELNIG HAIVAHALFVGFRQAVAEMKALMLAAATKR" misc_feature 841094..841810 /gene="pdxJ" /locus_tag="PA0773" /note="pyridoxine 5'-phosphate synthase; Provisional; Region: PRK05265" /db_xref="CDD:235380" misc_feature order(841112..841114,841118..841123,841145..841147, 841220..841222,841226..841228,841238..841243, 841301..841303,841391..841396,841403..841405, 841484..841486,841544..841546,841664..841669, 841730..841735) /gene="pdxJ" /locus_tag="PA0773" /note="active site" /db_xref="CDD:237977" misc_feature order(841112..841114,841214..841216,841289..841291, 841295..841297,841301..841303,841355..841357, 841361..841363,841478..841480,841484..841486, 841538..841540,841544..841546,841655..841657, 841664..841666,841715..841720,841724..841726) /gene="pdxJ" /locus_tag="PA0773" /note="hydrophilic channel [active]" /db_xref="CDD:237977" misc_feature order(841145..841147,841565..841570) /gene="pdxJ" /locus_tag="PA0773" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:237977" misc_feature order(841220..841222,841301..841303,841544..841546, 841664..841666) /gene="pdxJ" /locus_tag="PA0773" /note="catalytic residues [active]" /db_xref="CDD:237977" misc_feature 841373..841405 /gene="pdxJ" /locus_tag="PA0773" /note="active site lid [active]" /db_xref="CDD:237977" gene complement(841913..842881) /locus_tag="PA0774" /db_xref="GeneID:878567" CDS complement(841913..842881) /locus_tag="PA0774" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="tRNA (mo5U34)-methyltransferase" /protein_id="NP_249465.1" /db_xref="GeneID:878567" /translation="MIQHLALDALQRHLAGSPLYGWATSLPAQISARIEEGHGDLARW WSAVQRLPQVPAPKVDLAQRFALHSDHDAALQAQMKEALQGLIPWRKGPFDFFGVQVD TEWRSDWKWERVSPHVELRGKRVLDVGCGNGYYQWRMLGAGAESVVGVDPNWLFLCQF LAAKRYLPELPAWHLPLALEDLPEKLEGFDTVFSMGVLYHRRSPIDHLLALKDCLKRG GELVLETLVVEGDASTVLVPEDRYAQMRNVWFLPSVAALELWLRRAGFADARCVDVSL TSVEEQRSTEWMRFQSLPEFLDPQDRSRTVEGLPAPMRATLVARKP" misc_feature complement(841919..842872) /locus_tag="PA0774" /note="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB; Region: PRK15068" /db_xref="CDD:237898" misc_feature complement(order(842297..842299,842348..842350, 842426..842431,842480..842500)) /locus_tag="PA0774" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(842878..843618) /locus_tag="PA0775" /db_xref="GeneID:879217" CDS complement(842878..843618) /locus_tag="PA0775" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="tRNA (cmo5U34)-methyltransferase" /protein_id="NP_249466.1" /db_xref="GeneID:879217" /translation="MSESDRLFAQPQQRVADFVFNEDVVRVFPDMIKRSVPGYPTIVE NIGVLGAQFAQPNSVLYDLGCSLGAVTQSLRRHVRNDGCRVIGVDNSHAMIERCSEYL HAQDAMYQELLPVELIEADILALDLQPTSLVAMNFTLQFVAPDQRLGLLRRIRQALLP GGALILSEKLRFADAQEHALLTDLHIAFKRANGYSELEIAQKRSALENVMLPDTFEEH RERLLAAGFSRVSQWFQCLNFASMIALP" misc_feature complement(842884..843606) /locus_tag="PA0775" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases; cl17173" /db_xref="CDD:473071" misc_feature complement(order(843211..843213,843253..843261, 843349..843354,843412..843432)) /locus_tag="PA0775" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(843723..844295) /locus_tag="PA0776" /db_xref="GeneID:879270" CDS complement(843723..844295) /locus_tag="PA0776" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249467.1" /db_xref="GeneID:879270" /translation="MGTALRYSLLWASTVFVSSCGSLLPSERAEVQSPFVDYLDAELR YSQAQPGSTTRSQLFGLGFDPLTQGNGRMLSFIDVRLMFIQPNIPIDYLPGGLVQCLE AKDRCIGYAFDFSKTDTQRVGSFWADVFNFRKKRELQGWSFKAVFVFVNDVLVHKVSN GEPNIHRLEDKKNPLGPLQGAGEYFSDKLR" gene complement(844427..845179) /locus_tag="PA0777" /db_xref="GeneID:877691" CDS complement(844427..845179) /locus_tag="PA0777" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249468.1" /db_xref="GeneID:877691" /translation="MLRASFVLLALSCAAPLLSLAEPLRFAGDDGCPYLCPGTPQRPG YLVEALSQVLREPPHFDSLPWPRAVQMVRDGHRDGLVGAYGLDGLRVGSEPIGWVGLA FYTRHDSDWHYSGDASLLGQRLGLAQGYVNNPRFEAWRSQAGDDDLHLQVLGGERVLP RNLQKLLLGRIDVLLEDRDIIEHYLEHHPQLAGQIRRAGELPGRQPLHVGLSPHLPEV DARLAELDEGLRQLRREGTLKVLGERYRLSFE" misc_feature complement(844445..845044) /locus_tag="PA0777" /note="ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:440596" gene complement(845278..845682) /gene="icp" /locus_tag="PA0778" /db_xref="GeneID:879252" CDS complement(845278..845682) /gene="icp" /locus_tag="PA0778" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="inhibitor of cysteine peptidase" /protein_id="NP_249469.1" /db_xref="GeneID:879252" /translation="MSFSPSRLLLPLSIVVLAGCAGQQKPVVTLDDADDCSPLKLTQG QELVLTLPSNPTTGFRWELRNPAASVLKRLGPEVYSNSEEDSGLVGSGGESTWRFRVA ASGDDRLELVYRRPWEKDAEPAESFSCAIQVR" misc_feature complement(845281..845640) /gene="icp" /locus_tag="PA0778" /note="Chagasin-like inhibitor of cysteine peptidase, I42 family [Posttranslational modification, protein turnover, chaperones]; Region: ICP; COG5513" /db_xref="CDD:444264" gene complement(845793..848192) /locus_tag="PA0779" /db_xref="GeneID:877837" CDS complement(845793..848192) /locus_tag="PA0779" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ATP-dependent protease" /protein_id="NP_249470.1" /db_xref="GeneID:877837" /translation="MSDQDVNPEHISDAQPAGTGLVLPGQTLPTTLYVIPIHNRPFFP AQVLPVIVNEEPWAETLELVAKTDHHSLALFFMDNPPEDPRHFDVNSLPEHGTLVRVH HASREGGKLQFVAQGLSRVRIRGWIKRHRPPFMVEVDYPKTPIDPSDEVKAYGMALIN AIKELLPLNPLYSEELKNYLNRFSPNDPSPLTDFAAALTTAPGGELQEVLDTVPILKR MEKVLPLLRKEVEVARLQKELSAEVNRKIGEHQREFFLKEQLKIIQQELGITKDDKSA DADEFRARLEGKVLPEQARKRIDEELNKLSILESGSPEYAVTRNYLDWATALPWGVYG KDKLDLKHARKVLDKHHAGLDDIKDRILEFLAVGSFKGEIAGSIVLLVGPPGVGKTSI GKSIAESLGRPFYRFSVGGMRDEAEIKGHRRTYIGALPGKLVQALKEVEVMNPVIMLD EIDKLGASYQGDPASALLETLDPEQNVEFLDHYLDLRLDLSKVLFVCTANTLDSIPGP LLDRMEVIRLSGYISEEKLAIAKRHLWPKQLEKAGVPKGRLSISDAALRAVIEGYARE AGVRQLEKQLGKLVRKSVVKLLEDPESKVKIGPRDLEDYLGMPVFRSEQVLSGIGVIT GLAWTSMGGATLPIEATRIHTLNRGFKLTGQLGDVMKESAEIAYSYIGSHLKKYGGDP TFFDQAFVHLHVPEGATPKDGPSAGVTMASALLSLARNQVPKKGVAMTGELTLTGQVL PIGGVREKVIAARRQKIFELILPEANRGHFEELPDYLREGLTVHFAKRYGDVAKVLFP A" misc_feature complement(845802..848123) /locus_tag="PA0779" /note="ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]; Region: Lon; COG0466" /db_xref="CDD:440234" gene 848383..849135 /gene="pruR" /locus_tag="PA0780" /db_xref="GeneID:880836" CDS 848383..849135 /gene="pruR" /locus_tag="PA0780" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="proline utilization regulator" /protein_id="NP_249471.1" /db_xref="GeneID:880836" /translation="MFDTRLIRLPDQSHTHAHEHHQLVMSLAGRAEFEVNGCGGEVCR MRACLVPGEAGHVFAGVGDNRMLIIDLGEDNPTPEDPDLLARLFEAPRYPTLDADFQN LLSYAGAELARYGSDPLLTRALGGVLIRALHLRLFGEQQPLAASGPLDLERLDAHIVR NLARRITVAELAQVACLSPSHFHAQFKDSVGLTPHQYLLKVRLDCAARLLRESRLPLV RIAEECGFSSQSALTTAMRRYLGLTPKSLRKG" misc_feature 848398..848598 /gene="pruR" /locus_tag="PA0780" /note="RmlC-like cupin superfamily; Region: cupin_RmlC-like; cl40423" /db_xref="CDD:477354" misc_feature 848875..849126 /gene="pruR" /locus_tag="PA0780" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene complement(849256..851319) /locus_tag="PA0781" /db_xref="GeneID:882115" CDS complement(849256..851319) /locus_tag="PA0781" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249472.1" /db_xref="GeneID:882115" /translation="MSSSGLFPSRPLWPLTPLALACLIVSGETLGADGRPSELPSQVI TANPLGNESPATPSSVLEGDELTLRQKGSLGETLNGLPGVSSTYFGPGASRPVIRGMD GDRIRLLRNGVGALDASSLSYDHAVPEDPNSVERLEVVRGPAALLYGGNAIGGVVNSF DNRIPSEPVDGIHGSGELRYGGADTTRSRSGALEAGDGNFALHVDAASREFNDVRIPG YAHSSRQRQIDGDTGKHRVQNSDGRQDGGAVGGSYHWEHGYAGLSYSGYDSNYGSPAE DDVRLKMQQDRYAFASEIRDLEGPFTSLKLDAAYTKYEHKEIEDGETGTTFKNEGYEG RIEARHRPLGPLNGVVGAQFANSRFSALGEEAFVPHTETDSAALFALEEWKLSDRLDL SFGARLEHTRVDPDAKGNERFAENDGSQSFTTGSLSTGAVYKLTPIWSLAATLSYTER APTFYELYANGPHAATGTYEVGDADADKEKAVSTDLALRFDNGVHKGSVGVFYSRFSN YIGLLASGRHRNEEGEVVAAGDDEALPEYLYSGVRADFYGVEAQDRIHLLESPYGNFD LELSGDYTRAKNKDTGEPLPRIAPLRLNTALIWELQQWQARVDVEHAASQHRVPEEEL STDGYTTLGASLGYNFDLGESRWLAFVKGTNLTNQTVRYASSILRDRVPAAGRGIEAG VKVAF" misc_feature complement(849322..851205) /locus_tag="PA0781" /note="Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; Region: CirA; COG1629" /db_xref="CDD:441236" gene 851783..854965 /gene="putA" /locus_tag="PA0782" /db_xref="GeneID:878503" CDS 851783..854965 /gene="putA" /locus_tag="PA0782" /EC_number="1.2.1.88" /EC_number="1.5.5.2" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase" /protein_id="NP_249473.1" /db_xref="GeneID:878503" /translation="MFKASHVLQGEDQTRSAAEFFPVISANYAVDEEAYLGELLQLAD PGPDGIEAIRRNARALIETVRSRDNAVDTLDALLRQYSLDTQEGLMLMCLAEALLRVP DAATADALIRDKLSAADWQRHLGQSDNVLVNFAAWGLVMTGKVVNIDERTDGRAPSVI SRLVQRSGEPVIRAAMNQAMKLMGKQFVLGRTISEALKNGRPCREQGYTYSFDMLGEA ALTAADAEKYMADYRQAIDTVGAEPQVGPGPRPSISIKLSALHPRYEVAQRERVLSEL FANVLELAVRARKLNVGITIDAEEADRLELSLELYEKLMRDPAIAGWGEFGLVIQAYS KRCLPVLVWLTLLGRELGARIPLRLVKGAYWDSEIKQCQVQGADGYPVYTRKEGTDTS YLACARYLLSEHTRGVIYPQFASHNAHTVTAILALADEARAAGGEERDFEFQRLHGMG DALYDTVIEKYRRNVRIYAPVGAHKDLLPYLVRRLLENGANSSFVHKLVDPRVPVETL IQHPVTQLRQFKTLANDRIPLPQAIFGAGRKNSQGINMNIQNQWNELELAYKPHLTRQ WQAAPIVNGEKLSGPAHEVRCPYDLERLVGSVQYASAEQAGKALDVLQAAWPRWSATP VDERAGILERLADLLEAQRGELMALCTLEAGKSLQDGIDEIREAVDFCRYYAQQARQR LVREELRGPTGERNELFYEGRGIFACVSPWNFPLAIFLGQISAALVAGNTVLAKPAEQ TSLIAARTVELMFEAGLPKDVIALLPGDGATLGGVFCRDARVAGVAFTGSTDTARIIN RQLAEKPGAIATLIAETGGQNAMIVDSTALPEQVIKDAVQSAFTSAGQRCSALRVMYV QQDIAERVIELLKGAMAELKVGPTEVRVSDVGPVIDAEAKAGLEQHIAALKAAGKLIA ETKVPGNLNGHFVAPVAFEISGIDELKKENFGPVLHVVRYAAQDLEKVVQAINATGFG LTMGVHSRNEETARRIEELARVGNLYINRNQIGAVVGVQPFGGHGLSGTGPKAGGPNY LLRFVSERTTSVNTTAVGGNASLLSLADAE" misc_feature 851804..854947 /gene="putA" /locus_tag="PA0782" /note="bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA; Region: PRK11904" /db_xref="CDD:237017" protein_bind complement(853719..853731) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0783" /bound_moiety="AmrZ" gene 855277..856797 /gene="putP" /locus_tag="PA0783" /db_xref="GeneID:877927" CDS 855277..856797 /gene="putP" /locus_tag="PA0783" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="sodium/proline symporter PutP" /protein_id="NP_249474.1" /db_xref="GeneID:877927" /translation="MSVNTPTLITFVIYIAAMVLIGLAAYRSTNNFSDYILGGRSLGS FVTALSAGASDMSGWLLMGLPGAVYLSGLSESWIAIGLIVGAYLNWLFVAGRLRVQTE HNGNALTLPDYFTNRFEDNSRLLRIFSALVILVFFTIYCASGIVAGARLFESTFGLSY ETALWAGAAATIAYTFIGGFLAVSWTDTVQASLMIFALILTPVIVMLATGGVEPTFTA IELKDATSFDMLKGASFIGVISLMAWGLGYFGQPHILARFMAADSVKSIPAARRISMT WMILCLGGAVAVGFFGIAYFQAHPEQAGAVSENPERVFIELAKILFNPWIAGVLLSAI LAAVMSTLSCQLLVCSSALTEDFYKAFLRKGASQLELVWVGRAMVLLVAVIAIWLASN PENRVLGLVSYAWAGFGAAFGPLVLFSLLWKRMTRNGALAGMIVGAATVILWKNLLGW TGLYEIIPGFLFASVAIVVFSLLGKAPSTSMLKRFDDAEQEYREAHQGSAAPVTQR" misc_feature 855277..856761 /gene="putP" /locus_tag="PA0783" /note="Solute carrier families 5 and 6-like; solute binding domain; Region: SLC5-6-like_sbd; cl00456" /db_xref="CDD:444915" misc_feature order(855433..855435,855442..855444,856285..856287, 856294..856299) /gene="putP" /locus_tag="PA0783" /note="Na binding site [ion binding]; other site" /db_xref="CDD:271369" gene complement(856942..857871) /locus_tag="PA0784" /db_xref="GeneID:880845" CDS complement(856942..857871) /locus_tag="PA0784" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249475.1" /db_xref="GeneID:880845" /translation="MEIPMFASLPLTALRTFESAARQSSFKAAAEELAVTPTAVSHQI RSLEAWLGVPLFQRLPRKARLTDCGERLFRSLHGALLEISQSVDTLRPQRSVGNLTVS TTPAFAALWLVPRLGRFYAAHPQINLRLDTNCEVLDLHQDASIDLVIRYSLDDHPNFY GLCLFDECFAVYGSPAQVALAAERQPTLISVRWHNSRLYAHGWEAWCAQAGEDWMEGQ PVIRQYDEEHYALQAAIAGQGLVLASSILVSESVASGLLRPYRADISVDGAGYSALCV PGRERHPPVKAFFEWLRLEARQSGHACRLERDA" misc_feature complement(856978..857859) /locus_tag="PA0784" /note="DNA-binding transcriptional activator GcvA; Provisional; Region: PRK11139" /db_xref="CDD:182990" gene 857998..858636 /gene="azoR1" /locus_tag="PA0785" /db_xref="GeneID:882036" CDS 857998..858636 /gene="azoR1" /locus_tag="PA0785" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="FMN-dependent NADH-azoreductase AzoR" /protein_id="NP_249476.1" /db_xref="GeneID:882036" /translation="MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVG RVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSV PSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAM NHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA" misc_feature 857998..858633 /gene="azoR1" /locus_tag="PA0785" /note="FMN-dependent NADH-azoreductase [Energy production and conversion]; Region: AzoR; COG1182" /db_xref="CDD:440795" gene 858646..858951 /locus_tag="PA0786" /db_xref="GeneID:880741" CDS 858646..858951 /locus_tag="PA0786" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_249477.1" /db_xref="GeneID:880741" /translation="MAWFHLLVAAAFEVAFAMGMKFSNGFGRLWPSLLTVVAAIGGIY FLTLALRELPVSVAYPIWTAIGSLGTVFLGVLLLGESLTAVKLVSVGLIVAGVAGLK" misc_feature 858649..858948 /locus_tag="PA0786" /note="Multidrug transporter EmrE and related cation transporters [Defense mechanisms]; Region: EmrE; COG2076" /db_xref="CDD:441679" gene 859007..860170 /locus_tag="PA0787" /db_xref="GeneID:878491" CDS 859007..860170 /locus_tag="PA0787" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249478.1" /db_xref="GeneID:878491" /translation="MLTTLAVSNYRTLRDLVMPLRRLNLITGANGAGKSNVYRALRLL ADSARGEVIPSLAREGGLPSTLWAGPEDISRAMRSGAQPIEGSVRRQSVNLRLGFAGE DFGYCIDLGLPEPSQSKFGLDPVIKRECIWAGPFLRPANVLVDRRGPLLRARGGGGRW EVAAQHLATFDSMLGAAVDPRQVPELLGLRERIRSWRFYDHFRSDAEAPARRPQIGTH TPVLGADGADLAAALQTIREIGDAAALDEAVDDAFPGSRLHIDNPGGRFEVLIEQPGL LRPLRTAELSDGTLRYLLWIAALLSPRPPALLVLNEPETSLHPDLLPALGRLVGQAAQ HSQVLVVSHAARLVATLEEHPECHSLGLEKDFGETRIQGLRELDRPAWYWPVR" misc_feature 859007..860152 /locus_tag="PA0787" /note="Predicted ATPase [General function prediction only]; Region: COG4637" /db_xref="CDD:443675" gene complement(860175..863300) /locus_tag="PA0788" /db_xref="GeneID:882152" CDS complement(860175..863300) /locus_tag="PA0788" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249479.1" /db_xref="GeneID:882152" /translation="MNCAATGGASMGASERSTNDPSELQPCSLPASASPRKSRLRQRL MLIGFALPILAAVGIVVLHEAHTSRLQARELARYAATLDYEVRQGPSEAILFPADGPF DRRLGYQLLPSFMQRLYDRDYAITRQAHFSPALMRYAEHRLFPPYAEKAQAGLDIADC RGVPIYDFRYPQRRYANFASLPPLVVQSLLFIENRDLLDHERPYLNPAVDWGRFTQAA LSQVGKMLGFSAHSSGGSTLATQIEKYRHSAEGRTGSIGDKLRQMLSASVRSYREGPA NFAARQDIVLTYLNSVPLSAAPGYGEVTGLADGLWVWYGADYRQVGEALDGKAGLAAQ GLALRQVLALMIAHRRPSFYLAPRGRDELDRMTDSHLRVLTQAGVIEAPLRDAALAQK LAFRDPRSQPTVQPLPTNKGVTLARTRLAGMLGVPLYDLDRLDLRANTTLQHELQESV TAYLQKLADPDYAAQLGLIGERLLTPTSTRSVRYSFTLFERTPSGNQVRVQTDNTDQP FDINEGSKLELGSTAKLRVLASYLETVAQIHRDYGGMSVAELRKVEVEPLDFILRWGI DYLVASRDRDLSAMLQAAMERRYSASPYESFFTGGGLHTFNNFRKEDNGRRPMLLEAL RESINLPFVRLLRDLIRHDIYQNAGSKVQLLADDKDPRRADYLDRFVDKESQVYLRRF WVKYRDKDANQRLETFLDGLRPWPVRLAAIHRYLQPQADLASFSAFLRERLPRGSLTD KRAAELYERYGPGKFNLNDQGYVARVHPLELWLLGYLQKQPQATFGEAVAASGAERKE VYGWLFKSRHKNARDKRIRILLEVEAFLDLHQQWKKLGYPFDHLVPSYATALGSSGDR PAALAELMGIIVNDGVRMPTLRLEHLDFALGTPYETRFAPEATLGQRVMTSEVATTLR NALSQVVDAGTARRLQGTFSRPDGAPLVMGGKTGTGDNRLQTFSAGGHVRSSKALNRT ATFVFYIGPRHFGTLTAYVDGSESSQFKFTSALPVQVLKGMAPLLRDYLDPRTATRCQ VPLSPQQIGRL" misc_feature complement(<861357..862832) /locus_tag="PA0788" /note="Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis]; Region: MrcB; COG0744" /db_xref="CDD:440507" misc_feature complement(862200..862820) /locus_tag="PA0788" /note="Transglycosylase; Region: Transgly; pfam00912" /db_xref="CDD:459993" misc_feature complement(860445..>860807) /locus_tag="PA0788" /note="Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis]; Region: MrcB; COG0744" /db_xref="CDD:440507" gene 863455..863664 /locus_tag="PA0788a" /db_xref="GeneID:17373344" CDS 863455..863664 /locus_tag="PA0788a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719736.1" /db_xref="GeneID:17373344" /translation="MSMRTLFSLLVGVVLAGFSGLAAQAAPAPFYKWQSKLDGQVACM QTSPGDGWVRLDGPYRDLRCREPLR" gene 864095..865510 /locus_tag="PA0789" /db_xref="GeneID:879370" CDS 864095..865510 /locus_tag="PA0789" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_249480.1" /db_xref="GeneID:879370" /translation="MSSVGEQKVQDGSLKRELGERHIRLMALGACIGVGLFLGSAKAI QMAGPAIMISYILGGLAILVIMRALGEMAVHNPVAGSFSQYAKDYLGPLAGFITGWNY WFLWLVTCVAEITAVAVYMGIWFPDVPRWIWALAALASMGTINLIAVRAFGEFEFWFA LIKIVTILAMVVVGIGMIAFGFGNDGIATGISNLWAHGGFMPNGIQGVLMSLQMVMFA YLGVEMIGLTAGEARNPTKTIPSAINSVFWRILLFYVGSLFVIMSLYPWNEIGTQGSP FVMTFERMGIKTAAGIINFVVITAALSSCNGGIFSTGRMLYSLAQHRQAPAFFGKASR SGVPRRALILSILALLLGVLLNYLVPEKVFVWVTSIATFGAIWTWAMILLAQLRFRKT LSPAECDKLQYRMWLYPVSSYLALAFLVMVVVLMAFFEDTRIALYIGPPFILLLTVLY YAFNLAPKEPAGTGSVSRAAS" misc_feature 864095..865453 /locus_tag="PA0789" /note="L-asparagine transporter or related permease [Amino acid transport and metabolism]; Region: AnsP; COG1113" /db_xref="CDD:440730" gene complement(865636..866451) /locus_tag="PA0790" /db_xref="GeneID:882045" CDS complement(865636..866451) /locus_tag="PA0790" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249481.1" /db_xref="GeneID:882045" /translation="MFYLLLFLCGCLTGVSAVLFGFGGGFVVVPLLYHLLQLGRAADD PLAQAAMQVAVATSTCVMIVNAALATYRHRRAGSLLRAYVWPLGAYIGVGAVLGAALV GLASGDFIRLAFVAYLAITILDCLLRRGFLSRAEERQARPLGVGETRLGGTLIGAIAT FLGVGGSVMTVPLLRRCGLSMTQATSMANPLSLPVALGGTLTYLVLAGYQEQGLGRGF VGYIDLLAFATLAGGGWLGIRLATPLIGRIPDALHARVYVGLLAAVMLSMLAG" misc_feature complement(865645..866283) /locus_tag="PA0790" /note="Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family [Inorganic ion transport and metabolism]; Region: TauE; COG0730" /db_xref="CDD:440494" gene 866558..867346 /locus_tag="PA0791" /db_xref="GeneID:882086" CDS 866558..867346 /locus_tag="PA0791" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249482.1" /db_xref="GeneID:882086" /translation="MRNASIEQYDATPRAVVAMGTDYPDGYLLPRHRHRRAQLLYGAS GVMQVRTGDAGWVVPPQRAVWIPPGVEHEVRMLGVSTRSLYIEPGSAMAMPAHCQVLA VSPLLRQLLLAAVDMPLEYDTEGRDGALATLLLHELAAAETLPLHVPLPPEPRWLALC EAFLVEPDIRASAERWAGLLHTSLRSFNRTFRRYTGLSFGAWKQRACVVQALARLAGG ETVTAIALDCGYQSPAAFSTMFRRVLGQPPSAFQAGALRSPGGP" misc_feature 866558..867334 /locus_tag="PA0791" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" misc_feature 866603..866884 /locus_tag="PA0791" /note="AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain; Region: cupin_NimR-like_N; cd06124" /db_xref="CDD:380379" gene complement(867324..868808) /gene="prpD" /locus_tag="PA0792" /db_xref="GeneID:881990" CDS complement(867324..868808) /gene="prpD" /locus_tag="PA0792" /EC_number="4.2.1.79" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-methylcitrate dehydratase" /protein_id="NP_249483.1" /db_xref="GeneID:881990" /translation="MSANVDLNQRPDYDAVLQDIADYVLDYRIDSTEALDTARNCLMD TLGCGLLALRFPECTKHLGPLVEGTLVPHGARVPGTSFRLDPVKAAWDIGCIVRWLDY NDTWLAAEWGHPSDNLGGILAVADHLSQKRLANGEAPLSMRQVLEAMIMAHEIQGVIA LENSFNRVGLDHVLLVKVASTAVCAKLMGADREQLLAALSHAFVDGQALRTYRHAPNA GSRKSWAAGDATSRGVRLADIALRGEMGIPGVLSAPQWGFYDVLFSHTSKDLATKPED KRRFSFPQGYGSYVMENVLFKISFPAEFHAQTAAEAAVRLHPLVKDRLQRISRIVITT HESAIRIISKVGPLANPADRDHCLQYMTAVPLIFGDLVAEHYEDAFHAAHPLIDRLRE KMEIVEEPRYSREYLEADKRSIANAVEVFFDDGSSTGQVAVEYPLGHRRRRAEGIPLL QEKFKANLATRFPPQRCQRIFDLCSHQASLEATPVNRFMDLLAI" misc_feature complement(867327..868805) /gene="prpD" /locus_tag="PA0792" /note="bifunctional 2-methylcitrate dehydratase/aconitate hydratase; Region: prpD; PRK09425" /db_xref="CDD:181845" gene complement(868943..870130) /locus_tag="PA0793" /db_xref="GeneID:878041" CDS complement(868943..870130) /locus_tag="PA0793" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249484.1" /db_xref="GeneID:878041" /translation="MAHPPQIRIPATYLRGGTSKGVFFRLEDLPESCRVPGEARDRLF MRVIGSPDPYAAHIDGMGGATSSTSKCVILSKSSQPGHDVDYLYGQVSIDKPFVDWSG NCGNLSTGAGAFALHAGLVDPARIPEDGICEVRIWQANIGKTIIAHVPVSGGQVQETG DFELDGVTFPAAEIVLEFLDPSDDGEDGGAIFPTGNLVDDLEVPGVGTFKATMINAGI PTVFVNAEEIGYRGTELREEINGDPQQLARFERIRVAGALRMGLIKTPEEAATRQHTP KIAFVAPPRDYRTASGKLVAAGDIDLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTL VNLAAGGGERSAVRFGHPSGTLRVGAEASQANGEWTVTKAIMSRSARILMEGWVRVPG DAF" misc_feature complement(868946..870121) /locus_tag="PA0793" /note="probable AcnD-accessory protein PrpF; Region: prpF; TIGR02334" /db_xref="CDD:131387" gene complement(870249..872855) /locus_tag="PA0794" /db_xref="GeneID:882027" CDS complement(870249..872855) /locus_tag="PA0794" /EC_number="4.2.1.3" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aconitate hydratase" /protein_id="NP_249485.1" /db_xref="GeneID:882027" /translation="MNSAHRKPLPGTRLDYFDAREAVEAIQPGAYAKLPYTSRVLAEN LVRRCDPATLEASLRQLVERKRDLDFPWYPARVVCHDILGQTALVDLAGLRDAIADKG GDPAQVNPVVPVQLIVDHSLAVECGGYDPEAFAKNRAIEDRRNEDRFHFIDWTKQAFR NVDVIPPGNGIMHQINLEKMSPVIQARDGVAFPDTCVGTDSHTPHVDALGVIAIGVGG LEAENVMLGRASWMRLPDIVGVELSGRRQPGITATDVVLALTEFLRKQKVVGAYLEFY GEGASSLTLGDRATISNMAPEYGATAAMFAIDQQTIDYLRLTGRDDEQVALVEAYART AGLWADSLVDAEYERVLKFDLSSVVRNMAGPSNPHARVATSELAAKGIAGNLERARAE EAEGLMPDGAVIIAAITSCTNTSNPRNVIAAGLLARNADRLGLVRKPWVKTSLAPGSK VVTEYLREAGLLPHLEALGFGVVAYACTSCNGMSGALDPAIQREIVERDLYATAVLSG NRNFDGRIHPYAKQAFLASPPLVVAYAIAGTIRFDIERDVLGVVDGKEIRLKDLWPSD EEIDAVVRAAVKPEQFRQVYIPMFDITHGEREKVDPLYAWRPTSTYIRRPPYWEGALA GERTLRGMRPLAVLPDNITTDHLSPSNAILADSAAGEYLAKMGLPEEDFNSYATHRGD HLTAQRATFANPKLFNEMVRNADGSVKQGSLARVEPEGKVMRMWEAIETYMERKQPLI IVAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLIGMGVLPLEFKPGTTRL TLGIDGSETFDVLGARRPRADLTLVIHRRDGERLEVPVTCRLDSDEEVSIYEAGGVLQ RFAQDFLEAAGA" misc_feature complement(870264..872852) /locus_tag="PA0794" /note="2-methylisocitrate dehydratase, Fe/S-dependent; Region: 2met_isocit_dHY; TIGR02333" /db_xref="CDD:131386" gene complement(872986..874113) /gene="prpC" /locus_tag="PA0795" /db_xref="GeneID:880674" CDS complement(872986..874113) /gene="prpC" /locus_tag="PA0795" /EC_number="2.3.3.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="methylcitrate synthase" /protein_id="NP_249486.1" /db_xref="GeneID:880674" /translation="MAEAKVLSGAGLRGQVAGQTALSTVGQEGAGLTYRGYDVRDLAA AAIFEEVAYLLLYGELPNKQQLDAYLKKLQGQRDLPQALKEVLERIPKDAHPMDVMRT GASVLGTLEPELSFDQQRDVADRLLAAFPAIMTYWYRFTHEGQRIDCNSDEPTIGGHF LALLHGKKPSELHVKVMNVSLILYAEHEFNASTFTARVCASTLSDLYSCVTGAIGSLR GPLHGGANEAAMELIERFSSPQEATAELLKMLERKDKIMGFGHAIYKDSDPRNEVIKG WSKQLADEVGDKVLFAVSEAIDKTMWEQKKLFPNADFYHASAYHFMGIPTKLFTPIFV CSRTSGWTAHVFEQRANNRIIRPSAEYTGVEQRAFVPLEQR" misc_feature complement(872989..874113) /gene="prpC" /locus_tag="PA0795" /note="methylcitrate synthase; Provisional; Region: PRK12351" /db_xref="CDD:183463" misc_feature complement(order(873025..873057,873328..873330, 873451..873462,873466..873471,873490..873492, 873499..873510,873517..873519,873529..873534, 873541..873555,873664..873666,873799..873801, 873808..873810,873820..873822,873832..873834, 873856..873861,873868..873873,874057..874071, 874078..874086)) /gene="prpC" /locus_tag="PA0795" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:99861" misc_feature complement(order(873046..873048,873055..873057, 873103..873105,873115..873117,873178..873180, 873184..873186,873193..873195,873199..873201, 873304..873306,873319..873321,873328..873351, 873430..873432,873439..873441,873445..873453, 873544..873546,873553..873555,874075..874077)) /gene="prpC" /locus_tag="PA0795" /note="active site" /db_xref="CDD:99861" misc_feature complement(order(873103..873105,873184..873186, 873304..873306,873328..873342,873346..873351, 873448..873453,873544..873546,873553..873555, 874075..874077)) /gene="prpC" /locus_tag="PA0795" /note="citrylCoA binding site [chemical binding]; other site" /db_xref="CDD:99861" misc_feature complement(order(873046..873048,873103..873105, 873115..873117,873178..873180,873304..873306, 873331..873333,873445..873450,873544..873546, 873553..873555)) /gene="prpC" /locus_tag="PA0795" /note="oxalacetate/citrate binding site [chemical binding]; other site" /db_xref="CDD:99861" misc_feature complement(order(873055..873057,873178..873180, 873184..873186,873193..873195,873199..873201, 873319..873321,873328..873330,873334..873351, 873430..873432,873439..873441,873448..873453)) /gene="prpC" /locus_tag="PA0795" /note="coenzyme A binding site [chemical binding]; other site" /db_xref="CDD:99861" misc_feature complement(order(873178..873180,873331..873333, 873448..873450)) /gene="prpC" /locus_tag="PA0795" /note="catalytic triad [active]" /db_xref="CDD:99861" gene complement(874206..875102) /gene="prpB" /locus_tag="PA0796" /db_xref="GeneID:882026" CDS complement(874206..875102) /gene="prpB" /locus_tag="PA0796" /EC_number="4.1.3.30" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-methylisocitrate lyase" /protein_id="NP_249487.1" /db_xref="GeneID:882026" /translation="MSQTSLTPGQRFREAVATEHPLQVVGTINANHALLAKRAGFKAI YLSGGGVAAGSLGLPDLGISGLDDVLTDVRRITDVCDLPLLVDVDTGFGSSAFNVART VKSMIKFGAAAMHIEDQVGAKRCGHRPNKEIVSQQEMVDRIKAAVDARSDDSFVIMAR TDALAVEGLQAAIDRACACVEAGADMIFPEAMTELAMYKEFAAAVKVPVLANITEFGA TPLFTTDELASADVSLVLYPLSAFRAMNKAAENVYTAIRRDGTQKNVIDTMQTRMELY DRIDYHSFEQKLDALFAQKKNA" misc_feature complement(874215..875093) /gene="prpB" /locus_tag="PA0796" /note="2-methylisocitrate lyase; Provisional; Region: prpB; PRK11320" /db_xref="CDD:183086" gene complement(875113..875835) /locus_tag="PA0797" /db_xref="GeneID:877945" CDS complement(875113..875835) /locus_tag="PA0797" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249488.1" /db_xref="GeneID:877945" /translation="MTQNPPPLEIAHDDGETLSEHVFRKIQSAIVSGEIAPGSKISEP ELARTYGISRGPLREAIHRLEGLRLLVRVPHVGARVVSLSHAELIELYEIRESLEGMA CRLAAERMSQAEIDELRRVLDTHERDEAFQAGRGYYQQEGDYDFHYRIIQGSGNATLT RMLCGELYQLVRMYRIQYSTTPNRPRQAFAEHHRILDAIADRDGELAELLMRRHISAS RRNIERQLEPQPAKLASASSTV" misc_feature complement(875143..875790) /locus_tag="PA0797" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: GntR; COG1802" /db_xref="CDD:441407" gene 875953..876603 /gene="pmtA" /locus_tag="PA0798" /db_xref="GeneID:881992" CDS 875953..876603 /gene="pmtA" /locus_tag="PA0798" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phospholipid methyltransferase" /protein_id="NP_249489.1" /db_xref="GeneID:881992" /translation="MLSPPAAVPGESFVGIYDRYVLPRLIDFACGMGDVMKQRSLLVP RAHGRVLEIGLGTGLNLGFYDAAKVSAIVGVDPAAQMQALARERAAQIGIPVEMVALE LGEIRAEAESFDTIVCTFTLCSIAAPLPALGEMRRVLKRGGELLFCEHGRAPDASVLA WQRRLTPWWKPLAGGCHLDRDMPALLREAGFRIDELEQGYLPGPRPMTYVYRGVAR" misc_feature 876070..876435 /gene="pmtA" /locus_tag="PA0798" /note="Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Region: UbiE; COG2226" /db_xref="CDD:441828" gene complement(876617..878608) /locus_tag="PA0799" /db_xref="GeneID:878028" CDS complement(876617..878608) /locus_tag="PA0799" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="helicase" /protein_id="NP_249490.1" /db_xref="GeneID:878028" /translation="MFELPGDNAWLHFMQDDLPRLRQQGWFIDIRADFAYDLTPIDAW YAEVEEADDRQWFELELGIQVAGQRVSLLPALTELIRRSPALLDPRALARHADEEQLV LRLELNPPLRVALPFGRLKPVLAALSDFYLGDPEPQRKLRLGAPDAARLADLDELPLA WEGGDNLRDFARRLRSFQARPATPPQGLRAELRPYQLEGLSWMQTLRELDSGGVLADD MGLGKTLQSLAHVLLEKQAGRLDTPALVVMPTSLIPNWLDEAERFAPDLRVLALHGAG RRRDFARIDEHDLVLTTYALLPRDAAELGKRRFHLLILDEAQNIKNATTKAAVAAREL AARHRLCLTGTPLENHLGELWSLFHFLMPGWLGDARQFAQDYRTPIEKHGDEARLSHL AARLRPFLLRRTKEQVASELPPKSEFTQFVELSEAQRELYETVRLALDRKVREEIARR GLARSRIVILEALLKLRQVCCDTRLLQRQEDGARSGRALSSGKLAYLLDMLDELIAEG RRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRRAPVQRFQSGKVPVFLISLKA GGVGLNLTAADTVIHYDPWWNPAVENQASDRAYRIGQDKPVFVYRLIARGTVEEKIQH LQQEKAALADGLFSEGNGDGWKLDEADIDALFAPLPKAL" misc_feature complement(876695..878563) /locus_tag="PA0799" /note="Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination, and repair]; Region: HepA; COG0553" /db_xref="CDD:440319" gene 879027..879560 /locus_tag="PA0800" /db_xref="GeneID:878388" CDS 879027..879560 /locus_tag="PA0800" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249491.1" /db_xref="GeneID:878388" /translation="MARRTNATGYDPHSSDPGNPWRDATWRSSGASTNANVIEIQSQT FRIDDRLATRERGVAVPARRGSDDARPCFHPGRHPMTSQALAGGLSVTGRILVAVLLG YALAYAVTACLSIYLPLPRPDRVSFGSLGCFAVWVAAIVYAFAARSAWRACWVLALAS LALGGLAWLGLDYGARP" misc_feature 879453..879533 /locus_tag="PA0800" /note="Protein of unknown function (DUF3649); Region: DUF3649; pfam12365" /db_xref="CDD:432507" gene 879557..881077 /locus_tag="PA0801" /db_xref="GeneID:879203" CDS 879557..881077 /locus_tag="PA0801" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249492.1" /db_xref="GeneID:879203" /translation="MNLRQSMSGLHTWSGLLVSWLLFVIVFAGSLASFDKELTRWMQP DLHLPGAQSLGADQVRDWLRQRAPDAHAWWMLPPSERAPYWNAGWEPRDGSEFKVFQL DAVSGQPLPKTVGGEFFFTLHYDLHAGMVGLYIVGIAGMLMLVALVSGTIVHRRIFKD FFTLRPQAARQRAWLDAHNVLGVIGLPFHLMIAYTGLVIFIVYYMQAGLQVVYQNDGE RFFHEVQGSYEREEVGRPAGPPASIDGLIVEAGKVWGDGGAPGWISVHHPYDEAATVD IRRRDASRILDDQRTVNFDASSGELLHAQPSYAPGYATYGWLTGLHMIQWGGQLVRWM YLLLGLSGAMMIFGGLQVWLAKREVRGSRGVGLVRALNLAVCGGLSLASLALLWGNRL LPTQLAGRDTWEIRVFCASWALVALWAIVRRNSGTLGRTQLRLAAVLALGLPLLGLLR SPEGNLLASLQRGDWVLAGVDLSLLGLGLLCAWLGWRRRQASSKPVRRRLNVQEVA" misc_feature 879557..880681 /locus_tag="PA0801" /note="PepSY-associated TM region [Function unknown]; Region: PiuB; COG3182" /db_xref="CDD:442415" gene 881077..881400 /locus_tag="PA0802" /db_xref="GeneID:880826" CDS 881077..881400 /locus_tag="PA0802" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249493.1" /db_xref="GeneID:880826" /translation="MLLVFGLNLLAFTALCLAMNRHHKNLLGHEPSAPRVLLLRGVAL LDLGLALAFSIHRQGVEIGIVFWSCLLMLAAGTLVLLLAWRPRWALPCAAGVPLLGGV LALLR" misc_feature 881080..881382 /locus_tag="PA0802" /note="Protein of unknown function (DUF3325); Region: DUF3325; pfam11804" /db_xref="CDD:432087" gene 881486..881926 /locus_tag="PA0803" /db_xref="GeneID:880748" CDS 881486..881926 /locus_tag="PA0803" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249494.1" /db_xref="GeneID:880748" /translation="MHTPASNTVASVIPCLRYRDAPAAIDWLCRTFGFQRKLVVPGED GQVLHAELTYASPNGANGMLMLGSSVRDNAYGRLMRHVDEAGGNTQSLYLVVADPDAL FRSAQAAGAEIVIDIKDEDYGGRGFTCRDPEGHVWSFGSYDPWA" misc_feature 881519..881911 /locus_tag="PA0803" /note="Micromonospora sp. TioX and similar proteins; Region: TioX_like; cd08355" /db_xref="CDD:319943" gene 881958..882779 /locus_tag="PA0804" /db_xref="GeneID:878125" CDS 881958..882779 /locus_tag="PA0804" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_249495.1" /db_xref="GeneID:878125" /translation="MKTLTLIDGQEVAAIGQGTWHIGEQPGERKREVAALREGIELGM TLIDTAEMYAEGGAEDVVGAAIAGRREEVFLVSKVYPHNASREGLPAACERSLRRLGC ETIDLYLLHWQGRYPLEETIEAFERLRDQGKILRWGVSNFDLGDMYELDGSACAANQV MYNLEERGIEYDLLPWCQERGMPVMAYCPVGQGGRLLRHPALGEIAARHDASSAQVAL AWLLEQGVIAIPKAVTSAHIRLNAAAADLELSADDLRALDQAFPPPTRKRNLAIV" misc_feature 881961..882731 /locus_tag="PA0804" /note="Escherichia coli YeaE and similar proteins; Region: AKR_YeaE; cd19138" /db_xref="CDD:381364" misc_feature order(882009..882017,882099..882101,882114..882116, 882189..882191,882288..882290,882375..882380, 882432..882434,882516..882536,882597..882599, 882642..882659,882666..882668,882675..882680) /locus_tag="PA0804" /note="active site" /db_xref="CDD:381364" misc_feature order(882099..882101,882114..882116,882189..882191, 882288..882290) /locus_tag="PA0804" /note="catalytic tetrad [active]" /db_xref="CDD:381364" protein_bind complement(882508..882520) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(882989..883216) /locus_tag="PA0805" /db_xref="GeneID:879455" CDS complement(882989..883216) /locus_tag="PA0805" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249496.1" /db_xref="GeneID:879455" /translation="MSIQHRTQDAIRTLTAAFAPFDCLIQATRKGNFSFTIVDQHGVA CHSERLYPEQYDDSGKMEEVINRVRKKTLAA" protein_bind complement(883350..883365) /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA0806, PA0805'" /bound_moiety="LasR" gene 883777..884172 /locus_tag="PA0806" /db_xref="GeneID:882992" CDS 883777..884172 /locus_tag="PA0806" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249497.1" /db_xref="GeneID:882992" /translation="MPSPARTLLLAFVSAWFLLGGLGHFVFTDFFVGIVPPYVPWPLA AVWVSGVFELLGAAALLVPAWRRLAACGLFILTLCVTPANLYMWQHPDLFPSFPPTLL AARLALQAFLLGCILALMLARDEAPLARR" misc_feature 883780..884076 /locus_tag="PA0806" /note="Uncharacterized membrane protein [Function unknown]; Region: COG4270" /db_xref="CDD:443411" protein_bind 884553..884565 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0807" /bound_moiety="AmrZ" gene 884799..885566 /gene="ampDh3" /locus_tag="PA0807" /db_xref="GeneID:877713" CDS 884799..885566 /gene="ampDh3" /locus_tag="PA0807" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="protein AmpDh3" /protein_id="NP_249498.1" /db_xref="GeneID:877713" /translation="MLTIDYNSYRTTTPYGKRVRFLVLHYTALDFAASVKALTTGAAS AHYLIPAPHDPSYKAAGFKGQRIFNLVAEEDRAWHAGVSGWARRDNLNDTSIGIEIVN LARDDDGVFTFPDYERSQINALKQLAKNILQRYPDMTPKNVVGHSDIAVGRKSDPGPK LPWKELYEAGIGAWYDDATRDRYREGFERDGLPPRADLLEAFRLYGYALPATVDDAYF ASLLRAFQMHFRPENYDGALDVETAAILYALNEKYPA" misc_feature 884838..885305 /gene="ampDh3" /locus_tag="PA0807" /note="N-acetyl-anhydromuramyl-L-alanine amidase AmpD [Cell wall/membrane/envelope biogenesis]; Region: AmpD; COG3023" /db_xref="CDD:442259" gene 885635..886108 /locus_tag="PA0808" /db_xref="GeneID:879342" CDS 885635..886108 /locus_tag="PA0808" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249499.1" /db_xref="GeneID:879342" /translation="MNAVAQVVAKAEMLIRRPIAEVFEAFVDPAITARFWFSRGDARL EAGKRLRWHWDMYGVSQEIEVKDLQTNRRILIEWPNGDSNPSQVEWLFEELPGAGTFV SIRNSGFVGTPEEVIPRVVDATEGFTLVLAGLKACLEHGIALNLVADRFPRGLDG" misc_feature 885656..886066 /locus_tag="PA0808" /note="Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins; Region: SRPBCC_CalC_Aha1-like_8; cd08901" /db_xref="CDD:176910" misc_feature order(885659..885661,885665..885667,885671..885673, 885698..885706,885710..885715,885728..885730, 885752..885754,885773..885775,885779..885781, 885785..885787,885791..885793,885812..885814, 885818..885823,885827..885829,885836..885838, 885854..885856,885860..885865,885893..885898, 885902..885904,885908..885910,885941..885943, 885947..885949,885953..885955,885959..885961, 885989..886015,886019..886027,886034..886036) /locus_tag="PA0808" /note="putative hydrophobic ligand binding site [chemical binding]; other site" /db_xref="CDD:176910" gene complement(886160..887476) /locus_tag="PA0809" /db_xref="GeneID:877623" CDS complement(886160..887476) /locus_tag="PA0809" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="divalent metal cation transporter MntH" /protein_id="NP_249500.1" /db_xref="GeneID:877623" /translation="MSAKDTPAPQAAEPGRAQPVEVPGGGHWWRRLLAFAGPGYLVAV GYMDPGNWATDVAGGAQLGYLLLSVILLSSLMAMLLQALSARLGIASGLDLAQACRER YSPSTCRLLWLACETAIIACDLAEVIGTAIALKLLFGLPLAWGALLCVGDALLVLVLI GRGQRPLEAFVVALLTLIFACFAVQLLLSRPELGEVLQGFLPSPRVLSDPAALYLAIG IVGATVMPHNLYLHSSLVQSRAYPRSLAGKRKALRWAVADSSLALTLALLVNAAILIV AASVFHRNGHTEVVDIEQAHALLSPLLGLELASLLFAVALLASGLNSTVTTTLAGQIV MEGFLRLRLAPWARRLLTRGVAVLPVLLVTLLYGEDGTARLLIFSQVILSMQLPLAVI PLLQFVSDRRLMGPLAIGAGTRWLAWAVALAIVGLNLQLLADFAFG" misc_feature complement(886163..887476) /locus_tag="PA0809" /note="divalent metal cation transporter MntH; Region: PRK00701" /db_xref="CDD:234815" gene complement(887583..888284) /locus_tag="PA0810" /db_xref="GeneID:882076" CDS complement(887583..888284) /locus_tag="PA0810" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="haloacid dehalogenase" /protein_id="NP_249501.1" /db_xref="GeneID:882076" /translation="MRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCVELTDRWR QQYKPAMDRVRNGQAPWQHLDQLHRQSLEALAGEFGLALDEALLQRITGFWHRLRPWP DTLAGMHALKADYWLAALSNGNTALMLDVARHAGLPWDMLLCADLFGHYKPDPQVYLG ACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLI ASDLLDLHRQLAASA" misc_feature complement(887682..888284) /locus_tag="PA0810" /note="2-haloalkanoic acid dehalogenase, type II; Region: HAD_type_II; TIGR01428" /db_xref="CDD:130495" gene complement(888315..889562) /locus_tag="PA0811" /db_xref="GeneID:879246" CDS complement(888315..889562) /locus_tag="PA0811" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_249502.1" /db_xref="GeneID:879246" /translation="MTAALAANPTQRYRWVILLIATFAQACACFFVQGIGAIAVFVQN DLQLSSLQIGLLVSAAQLVPIVGLLVAGELLDRYSERLVVGLGTLIVALALCASLWAT DYLTILLFLVVVGAGYSTAQPGGSKSVSRWFAKTQLGFAMGIRQAGLPLGGALSAALL PYLAGVYGWRSAFLAGGLVAFLGALAFMLFYRTPPDAPAPGANPAERDLGAVVKSRLA MITDPAMKNIVCSGVALISVQYGILVFTVLYLHETLEIGIGMAATLLFVAQGSGVAGR ILLAAWSDRCRAGRYFPVMVCLGAVILGLLALVLLPLQSPLGMGLVVAWLGFFGFGWY GPWVAYVADTAPVGKTGFALGLAMAINQLAIVLAPPALGLLKDFSHSFVPGWLALCLM AAVALVVTAWSGRGLPTALPQKH" misc_feature complement(888360..889502) /locus_tag="PA0811" /note="Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; Region: MFS_MT3072_like; cd17475" /db_xref="CDD:341028" misc_feature complement(order(888468..888470,888477..888482, 888489..888494,888501..888503,888549..888551, 888561..888563,888573..888578,888735..888737, 888747..888749,888831..888833,888840..888848, 888855..888860,888867..888869,889104..889106, 889113..889118,889125..889127,889185..889187, 889194..889202,889206..889211,889359..889361, 889455..889457,889464..889469,889476..889481)) /locus_tag="PA0811" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341028" gene complement(889559..890854) /locus_tag="PA0812" /db_xref="GeneID:882091" CDS complement(889559..890854) /locus_tag="PA0812" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249503.1" /db_xref="GeneID:882091" /translation="MTGSRKTLILGCASTGAKFTPRNHAATGDRLLDSICTGATIRTA PGELLDEARQLYEMGCRYYHYHARNPLTQEQTTDNDIYQAVSRALQNRFPDLMLSFGA SRNGSEVQENIRRFGEWERVSHCAIPLHLGGAHFVTIQAAIELQVICELEKQRRKLDL DYASSPAFLADLRDYQPSTALEKAELQTHSTSKGADYGVTSPMTQFQVYRNAIQARQK LGLFHEVEWVQHVRSYAMTRFAVEHPRLRLGDSGQLNVILLFGFSPRLPFPETYQQFR AVIESAKSLEYDIGEPCVRKRKVSITVGAAVMPQHAAQHFRPLDVGPRAGTPLCAVRR LAAYAAQADSQVDVLRVGMEDTPYAVDDDGRVTLSDNCQLLRQALDELRANGAEAELD GERIFQRMGMERTLGEYLSLQRLHPLGEANFTLAREFVQ" misc_feature complement(<890561..890833) /locus_tag="PA0812" /note="beta-keto acid cleavage enzyme; Region: BKACE; cl15827" /db_xref="CDD:472835" misc_feature complement(<889667..>889864) /locus_tag="PA0812" /note="Uncharacterized conserved protein YlxW, UPF0749 family [Function unknown]; Region: YlxW; COG3879" /db_xref="CDD:443087" gene complement(891142..892389) /locus_tag="PA0813" /db_xref="GeneID:882049" CDS complement(891142..892389) /locus_tag="PA0813" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249504.1" /db_xref="GeneID:882049" /translation="MSALFPAAPDAFGADELLRLRRETPAWGSYAHFAHGSASLPPQV LYEALDSWLEAERRWGVQRAAEHFAEPLLAVRDSVARVLGTQPRHIALLDCASRAWSV AFAAALAAHPRIRAISSFDEYGSNSLCLLAARQQRGLELRLIDARGDAAQLLQRLDEQ LHDLAPGQTPLLSLSAVPTGHGAATALEGVAERIRAHDGLFFLDASHAVGQLPLAVEA TGCDVLVFPPRKWLRGPKGLGVLYLGERALERLALPDGLDVGGAQWSDAFALQARDDA RRFECSEFNPGLRLALKASCDYLLQTDVRRIARRNRQLRERIAQQLYRRLGWTPLEQG PHASALMTYAAPELSGEQWLKRLHARGVNASYIGPQYARWALREQALPGVLRLTPHYL TDDGEIERLGEALEDCLRQRAAS" misc_feature complement(891160..892335) /locus_tag="PA0813" /note="Selenocysteine lyase/Cysteine desulfurase [Amino acid transport and metabolism]; Region: CsdA; COG0520" /db_xref="CDD:440286" gene complement(892386..892820) /locus_tag="PA0814" /db_xref="GeneID:879349" CDS complement(892386..892820) /locus_tag="PA0814" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249505.1" /db_xref="GeneID:879349" /translation="MQTSPAPAIVAGGAYQPVVLHAGIAYVSGQLPRQHGELRWTGKV GSELDLEQARQAARLCAACCLLALEEALGGLQRVERLLKVTGYVASAAGFVQQPAVID AASEYFDEVLGARGGHARAAVGVAELPRGAAVEVELIAAVRP" misc_feature complement(892398..892802) /locus_tag="PA0814" /note="This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence...; Region: YjgF_YER057c_UK114_like_1; cd02199" /db_xref="CDD:100006" misc_feature complement(order(892404..892406,892410..892412, 892416..892418,892446..892472,892494..892496, 892506..892508,892515..892517,892560..892562, 892566..892568,892572..892577,892581..892583, 892734..892739,892743..892745,892749..892751, 892758..892760,892764..892766,892773..892778)) /locus_tag="PA0814" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100006" misc_feature complement(order(892416..892418,892461..892463, 892515..892517,892527..892529,892776..892778)) /locus_tag="PA0814" /note="putative active site [active]" /db_xref="CDD:100006" gene 893041..893994 /locus_tag="PA0815" /db_xref="GeneID:879524" CDS 893041..893994 /locus_tag="PA0815" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249506.1" /db_xref="GeneID:879524" /translation="MIDLVMLKDFLVLCRIKSFSRAAQECHVSVSGLSRRIQTLEQWL GAPVFERHKHALELTEAGRQLQGVAQDAVRALDNLRQSIRERDEDAQRRIRFCAPHIL SSVFFPHWIPRLQADFRSAKFSVDCDYLPQCLSRLRDGSVDYVVALLDEGEAVSRRLG IDSEAEFQRLELGHEQLVAVCAPDAAGQPLFNLDRLQTEALSFLGYSEECHLGWALEP LLRDSGLFLQRHHSSSQTEGLRFFAQSRLGVAWLPHTLVREDLASRRLVRAGGQRFDV PLRYTLIRRRLPLPGEAERLWTFLGELARPAPRYAVVGAAS" misc_feature 893044..893955 /locus_tag="PA0815" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene complement(893967..894851) /locus_tag="PA0816" /db_xref="GeneID:880912" CDS complement(893967..894851) /locus_tag="PA0816" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249507.1" /db_xref="GeneID:880912" /translation="MIRELRTLVAVARRGSFAAAGEQVGLTQSAVSAQIRALERSVGV ELFKRTPRAAHLNKAGRQAVRTAEQILALFDGIGQGDSPRGRLRIGAVNTAQTGLLPE VLKRLAEQAPHIEPQVVPGVSLHLLDQVDAAELDLAILIRPPFNLPRGLSAQRVERQP FVLIAPPQCTATDALELLRTQPFIRYDHVSFGGRLVGDFLEAQQLRPRQVMELDEIDA IARMVENGLGVALLPRAGLWLREPARVRVIELGALEFQRELVMVSRSGSAQDDLVGEF RRALLAETAAQEAAPTTA" misc_feature complement(894669..894848) /locus_tag="PA0816" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(894012..894596) /locus_tag="PA0816" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold; Region: PBP2_LTTR_like_2; cd08427" /db_xref="CDD:176118" misc_feature complement(order(894177..894182,894186..894191, 894207..894224,894492..894512,894516..894518, 894528..894530,894537..894542,894546..894551)) /locus_tag="PA0816" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176118" gene 894952..895377 /locus_tag="PA0817" /db_xref="GeneID:879378" CDS 894952..895377 /locus_tag="PA0817" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ring-cleaving dioxygenase" /protein_id="NP_249508.1" /db_xref="GeneID:879378" /translation="MSLMPFHLAIPVHDLPAARRFYGEVFGLSEGRSAEHWVDFDFFG HQLVIHQHPQTDSQRHAGSNPVDGHDVPVPHFGVVLAWDDWHALAERLQQRGTRFVIE PYIRFKGQVGEQATLFLFDPCGNALEFKSFRDMGQLFAK" misc_feature 894952..895374 /locus_tag="PA0817" /note="Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]; Region: COG3565" /db_xref="CDD:442786" gene complement(895396..895668) /locus_tag="PA0818" /db_xref="GeneID:879301" CDS complement(895396..895668) /locus_tag="PA0818" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249509.1" /db_xref="GeneID:879301" /translation="MPYRVLLLILALTPALASSATLDERLGDLEHAFKPDLDGTTSAK PASPPPERFKLAPLGSVVRKKECATSSLPDEQSSCAALEFCTDCAQ" gene 895824..896117 /locus_tag="PA0819" /db_xref="GeneID:882118" CDS 895824..896117 /locus_tag="PA0819" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249510.1" /db_xref="GeneID:882118" /translation="MAPCPGKTVTAQSPSTFIPLRRTSQCNQHPGCATLYLDCSAASE DLFDTARTRLESAIGTLSVLDLLDETEEPGESTCRITGSLLSLFEAEYARRHR" gene 896416..897228 /locus_tag="PA0820" /db_xref="GeneID:880918" CDS 896416..897228 /locus_tag="PA0820" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249511.1" /db_xref="GeneID:880918" /translation="MPAVIAENDVSIWDDETGAVYHYPRRYSAILKPGVQVVYYKGKL TDKSFADQRLSAQPHYFGIARIGKVYPDPESSKGDLFALIESFQPFEQAVLAKEGNSY LEPIPPSKASNYWRSGVREIGQVTFDSILARAEIKPLQVAESWGDRALGGFESRTEGS LSTYYGVRYERDPTLRLQAIAIHGVACKACGFDFGKAYGEYAKGFIHVHHTQPISEFE APKAVNPETDLVPLCANCHAVVHRRRDRTLSVDELKGLVRGRWVCAEADVVV" misc_feature 896422..896781 /locus_tag="PA0820" /note="EVE and YTH domains belong to the PUA superfamily; Region: EVE-like; cl42428" /db_xref="CDD:455773" misc_feature 896875..897195 /locus_tag="PA0820" /note="Predicted restriction endonuclease, HNH family [Defense mechanisms]; Region: COG3183" /db_xref="CDD:442416" protein_bind 896730..896742 /locus_tag="PA0820" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 896740..896752 /locus_tag="PA0820" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(896755..896767) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(897335..898423) /locus_tag="PA0821" /db_xref="GeneID:878355" CDS complement(897335..898423) /locus_tag="PA0821" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249512.1" /db_xref="GeneID:878355" /translation="MEQPFDLAAELAKQPHLLEIAGNLLMKSGPEDYIGAVLCLRGTL YFKKAHTPLVRESLCQCFDEFERLAEPHLTWLWREEPAQGKPLTAYRDTQPLREMMGA MDEDDHLSFCYTSGKKSRDAGAWLFDIYGKRSWQAKMGHDLSVLEFSVPLLYQERQPL DFLQLFIDFARRLEPEQGYAGHAYNLSPTSWDNDEPSEAFMAARMPGLDVGTACLLAN TPEFKPTRIKTVSWLTLLNNERLALAGGLDALRAQLPSSHFAFYRYGDGVVIQAGAYP YIAGDAEDSRPAPYVLLNHALKGIRYETIGSLHGGSHDGELRLVGWAADQWLKRLDVE DSEIPRWCDKLLSAEPYLDATNTLPERL" misc_feature complement(897431..898054) /locus_tag="PA0821" /note="Protein of unknown function (DUF3396); Region: DUF3396; pfam11876" /db_xref="CDD:463379" gene complement(898908..899141) /locus_tag="PA0823" /db_xref="GeneID:877900" CDS complement(898908..899141) /locus_tag="PA0823" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249514.1" /db_xref="GeneID:877900" /translation="MSDQPSLSRGGMSPEGRTNPVGTLEPRLDPQDKKVLCSAVCHCS STPNLSQDGKSLKQACVAQRLGELDEVLQGRSP" gene complement(899138..899656) /locus_tag="PA0824" /db_xref="GeneID:877875" CDS complement(899138..899656) /locus_tag="PA0824" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249515.1" /db_xref="GeneID:877875" /translation="MSGKPAARVTDPTTCPVPGHGSNPIVQGSPDVVFDGLPAARQGD ASACGSPMISAVSSTVLINGLPAVTLGSIGAHGNVVIGGSGTVLIGDVFTPAPRAPAL PLNRNSVPCSGRFQLIDHETGKPVAGRRVRVWSSGGWNAFDTTDADGMTSWIERPTAE ILYIDLVQRCDA" misc_feature complement(899405..899644) /locus_tag="PA0824" /note="proline-alanine-alanine-arginine (PAAR) domain with C-terminal extension; Region: PAAR_CT_1; cd14743" /db_xref="CDD:269828" misc_feature complement(order(899450..899461,899534..899545, 899633..899644)) /locus_tag="PA0824" /note="PAAR motifs; other site" /db_xref="CDD:269828" misc_feature complement(order(899429..899431,899513..899515, 899522..899524,899612..899614)) /locus_tag="PA0824" /note="putative Zn binding site [ion binding]; other site" /db_xref="CDD:269828" misc_feature complement(899153..>899500) /locus_tag="PA0824" /note="Uncharacterized conserved protein, DUF2345 family [Function unknown]; Region: COG4253" /db_xref="CDD:443395" gene complement(899830..900165) /locus_tag="PA0825" /db_xref="GeneID:880620" CDS complement(899830..900165) /locus_tag="PA0825" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249516.1" /db_xref="GeneID:880620" /translation="MSLQSEMLVEQKVSNAQKSTGTAYLLWFFLGGFGAHRFYLGKTG TAVTQLIITLIGCFTLFPLIITGIWWIVDAFLIPGIIQGHTEQTRRDARLEVAALQVA GASASHPQD" misc_feature complement(899902..900135) /locus_tag="PA0825" /note="Uncharacterized membrane protein YozV, TM2 domain, contains pTyr [General function prediction only]; Region: TM2; COG2314" /db_xref="CDD:441888" gene complement(900408..901046) /locus_tag="PA0826" /db_xref="GeneID:882006" CDS complement(900408..901046) /locus_tag="PA0826" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249517.1" /db_xref="GeneID:882006" /translation="MKKEPKGAKNRIVIAKDEKNVLTCTSEGFEYTPDIVKNVYGKSS RPALEDWFLTELDFFRRYYPGYEVFTLGSSCVFGEKFVNYLTICEFDIDSTYAFDCLK KALRESDQAIRRKLSAMWKWDIAARKDWSIVFMVGHMDFAYFLQHRKEFQEDAHKRFM STFTTAETKITSRDYKVMHDGAILPFDETALSPEDRFIFENYQKIKFETTPL" gene complement(901520..901872) /gene="ssrA" /locus_tag="PA0826.2" /db_xref="GeneID:3240255" tmRNA complement(901520..901872) /gene="ssrA" /locus_tag="PA0826.2" /db_xref="GeneID:3240255" gene complement(901934..902812) /locus_tag="PA0827" /db_xref="GeneID:882089" CDS complement(901934..902812) /locus_tag="PA0827" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249518.1" /db_xref="GeneID:882089" /translation="MPTLSRRLLWPLAILLLVLGRPLAAADLYYLGQRIPDIQKPWDS HDYQVLIDALKKIEETQKNALPRRSGEFTGPLYLRMVSEENFRPQLNIYSPLEIRQNE AREVLFKLKELMRLYFDFRAAKQPYGAEALGLMSYSLREQSILFTLTVEFWMTLSQAE QRNPARLQGMQETKAAAAMLTGSALDYLGLTAQFERQDLVLYSAELAKEMPELFIHLP SPVRAQLLERIAAFAKDHPYPEVRDNMRDLQPVLQAIQADVEKQLAPGRNAKAPDKPL DLSPPPEGKPSGVKGL" gene 902900..903583 /locus_tag="PA0828" /db_xref="GeneID:879345" CDS 902900..903583 /locus_tag="PA0828" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249519.1" /db_xref="GeneID:879345" /translation="MATAQWDGLQAVFEDLGGYGALARQAAQGEGPLVGHLQRTNIQL AAIPVFTRKGVAETTANDLLEAARVSRRTFYKYFAGKLEVLESIYHSAVQLLLARFGG LRSEAGSDEDWLRAMVSLFFDYHLAVGPIIRMMQEEALHAGSPLAAHRQRAHLKIVEL WTERLGAQGAAHDALTYRVLIWAMEAASLELLNASDPLELPRVKRVLGDLLVGTLCPR TQAPTRLQG" misc_feature 903014..903451 /locus_tag="PA0828" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene 903692..904633 /locus_tag="PA0829" /db_xref="GeneID:878104" CDS 903692..904633 /locus_tag="PA0829" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_249520.1" /db_xref="GeneID:878104" /translation="MSATPYLLQPPLAVGFARLGFGSLSLESLRERYAAPSSGSRFIE LDGFPLHYRDEGSRDKPVLVMIHGVVASLHTWDDWVKAMSPYFRIVRFDVPGFGLTGP GRDSRYSGERMVAILGQLLDFLKIDKASIAGNSLGGYIAWNFALAQPQRVERLVLIDP AGYQMRKVPWMIASAALPGSTLVMPLWMPRALIAQGIKEVYGEPGRIKPGVVDRYYDL SRRPGNRKGMMEIFRVLLKVNREELGTSGERIARIVAPTLLMWGERDRWISPKHVPLW QRDLPGIQVKTYPGVGHIPMEEIPEQTAADALRFLMA" misc_feature 903803..904624 /locus_tag="PA0829" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene complement(904768..905601) /locus_tag="PA0830" /db_xref="GeneID:879283" CDS complement(904768..905601) /locus_tag="PA0830" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249521.1" /db_xref="GeneID:879283" /translation="MASTTPEGLEIRPRHLDFDLPDPMPRHWHSGDAFKTHMFNAMSV LFPDGERFFIDSVRHYRERVEDPALKQQIRGFIGQEGHHSREHLVYSDRLRALGYDID RLEGGAKRRIRFAQQKLHPSRQLAATAALEHLTAIMADGLLSNPRWLEGADPTMARLW RWHALEETEHKAVAYDVFMLVNGKARLRRRAMVQGTFFFALDTTKGLVHMLKRDGLLW NFKVWRDGIKWLWGKDGVFRSLVGVYLDFYKKDFHPWQHNNLHLIEQYRDQFEPEPKA A" misc_feature complement(904783..905601) /locus_tag="PA0830" /note="Predicted metal-dependent hydrolase [General function prediction only]; Region: COG3687" /db_xref="CDD:442903" gene 905726..906745 /gene="oruR" /locus_tag="PA0831" /db_xref="GeneID:878384" CDS 905726..906745 /gene="oruR" /locus_tag="PA0831" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="ornithine utilization transcriptional regulator OruR" /protein_id="NP_249522.1" /db_xref="GeneID:878384" /translation="MKQPLNFTAELVPVAYAEALLDLVAEYGVSRQALFDAARVRPEV LDSPNGRLSFLDFNQLTYSAQALCGEPALGLVLGQRLNVSAHGILGYAVLSSANLGKA IQFALKYYRVLGLAYELELVLDDGRAELRAVESMPLGAASVFAAEGLMATLYSIACFL VGEPLQDVRVGFAYPPPAHARRYAEVFGVAAEFEQPWHWLSMPSEYLERPMALANPAT VQMCEQQCEALLATLDVQEGLLTRVRRLLLARPGDFPDLEQAARELHTSGRSLRRHLS SLGTTYQQVLDDVRKRLALQYLTTTQLPLYEIALLLGFNDSSNFRRAFRKWTGKLPSD YREAP" misc_feature 905807..906358 /gene="oruR" /locus_tag="PA0831" /note="Arabinose-binding domain of AraC transcription regulator, N-term; Region: Arabinose_bd; pfam12625" /db_xref="CDD:432679" misc_feature 906488..906733 /gene="oruR" /locus_tag="PA0831" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene 906847..907488 /locus_tag="PA0832" /db_xref="GeneID:881972" CDS 906847..907488 /locus_tag="PA0832" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249523.1" /db_xref="GeneID:881972" /translation="MSTSPALIRETFPVGPLQCNCTIIGDPLTRKAIVVDPGGDHELI LQRLDRLGLQVVSIIHTHAHLDHFLASGEMKKRTGASLHLHKDDQFLWDNLEMQCQLF GVPYTPVPAPDRWLADDEELACGCGVALHTPGHTPGSMSFWFPRAKLLIAGDTLFRRG IGRTDLWGGDSAAIQRSIRQRLYSLDEDATVVAGHGPDTTLGEEMRENPFVRG" misc_feature 906874..907431 /locus_tag="PA0832" /note="mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain; Region: metallo-hydrolase-like_MBL-fold; cl23716" /db_xref="CDD:451500" misc_feature order(907030..907032,907036..907038,907042..907047, 907249..907254,907306..907308,907429..907431) /locus_tag="PA0832" /note="active site" /db_xref="CDD:293792" gene 907594..908307 /locus_tag="PA0833" /db_xref="GeneID:878406" CDS 907594..908307 /locus_tag="PA0833" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249524.1" /db_xref="GeneID:878406" /translation="MFTSRCLPLAAAVTALALLAGCANNNPYDTQSQSQGGMSKTAKY GGLGALAGAVAGAAIDHNNRGKGALIGAAVAGAAAAGYGYYADKQEAELRRQMEGTGV EVQRQGDDIKLIMPGNITFATDSANIAPSFYAPLNNLANSFKQYNQNTIEIVGYTDST GSRQHNMDLSQRRAQSVAGYLTAQGVDGTRLSTRGMGPDQPIASNSTADGRAQNRRVE VNLRPVPGAQGPAQTQPQY" misc_feature <907852..908265 /locus_tag="PA0833" /note="OmpA family lipoprotein; Region: PRK10510" /db_xref="CDD:182507" gene complement(908377..909291) /locus_tag="PA0834" /db_xref="GeneID:882122" CDS complement(908377..909291) /locus_tag="PA0834" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="acyltransferase" /protein_id="NP_249525.1" /db_xref="GeneID:882122" /translation="MLSFLPHFLRGSLAGLLLVSSTLCWACLLFGMTLVKLLLPFAAA QRLCSKIMSLIAEGWIACNKGWMNLVQRTRWNVQGLEGLEYQHSYLVTSNHQSWVDIL VLQYQLNRRIPLLRFFLKQELIWVPIIGLCWWALDFPFMKRYSKAYLARHPEKKGQDL ATTRKACAKFSRIPVAVFNFLEGTRFTRAKHDEQQSPFRHLLKPKAGGIAFVLDAMGE QLKTLVNVTIHYPDGSPTFWCLLSGRLKDVVVRFEELEIPRQFVGKSYDQDAGYRAEF QQWVNQLWERKDQLLDSLHREFPGNAKA" misc_feature complement(908389..909291) /locus_tag="PA0834" /note="putative acyltransferase; Provisional; Region: PRK14014" /db_xref="CDD:237584" gene complement(909418..911532) /gene="pta" /locus_tag="PA0835" /db_xref="GeneID:882123" CDS complement(909418..911532) /gene="pta" /locus_tag="PA0835" /EC_number="2.3.1.8" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="phosphate acetyltransferase" /protein_id="NP_249526.1" /db_xref="GeneID:882123" /translation="MHTFFIAPTGFGVGLTSISLGLLRALERAGLKVGFFKPIAQLHP GDLGPERSSELVARTHGLDTPKPLPLAQVERMLGDGQLDELLEEIISLYQRAAADKDV VIVEGMVPTRHASYAARVNFHLAKSLDAEVILVSAPENETLTELTDRIEIQAQLFGGP RDPKVLGVILNKVRGEADAANAEDGVADFARRLTEHSPLLRDDFRLIGCIPWQDELNA ARTRDIADLLSARVINAGDYEQRRVQKIVLCARAVPNTVQLLKPGVLVVTPGDRDDII LAASLAAMNGVPLAGLLLCSDFPPDPRIMELCRGALQGGLPVLSVATGSYDTATNLNR MNKEIPVDDRERAERVTEFVAGHIDFEWLKQRCGTPRELRLSPPAFRYQVVQRAQKAG KRIVLPEGSEPRTVQAAAICQARGIARCVLLAKPEEVQAVAQAQGIVLPEGLEIIDPD LVRQRYVEPMVELRKGKGLNAPMAEQQLEDSVVLATMMLALDEVDGLVSGAIHTTAST IRPALQLIKTAPGYNLVSSVFFMLLPDQVLVYGDCAVNPDPSASDLAEIAVQSAASAQ AFGIPARVAMISYSTGDSGSGVDVDKVREATRLAREQRPDLLIDGPLQYDAAAIASVG RQKAPNSPVAGQATVFIFPDLNTGNTTYKAVQRSADCVSVGPMLQGLRKPVNDLSRGA LVEDIVYTIALTAIQADAQAPA" misc_feature complement(909439..911532) /gene="pta" /locus_tag="PA0835" /note="phosphate acetyltransferase; Reviewed; Region: PRK05632" /db_xref="CDD:235537" gene complement(911595..912779) /gene="ackA" /locus_tag="PA0836" /db_xref="GeneID:877790" CDS complement(911595..912779) /gene="ackA" /locus_tag="PA0836" /EC_number="2.7.2.1" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="acetate kinase" /protein_id="NP_249527.1" /db_xref="GeneID:877790" /translation="MPSRNILVINCGSSSIKFALVNEAHSLFPLHGLAERLGSRDAVL RWKRGGDSDSLMIPNADHRAALAQLLPMVQNAAGGKLHGIGHRVVHGGELFTHATRID DRVVEAIRATAPLAPLHNPANLQGIEAAMTLFPKLPHVAVFDTAFHQSLPEHAYRYAL PEALYREHGVRRYGFHGTSHRYVSHRAAEMAGLAVGDSSWLSAHLGNGSSTCAIVNGQ SLDTSMGLTPLEGLVMGTRSGDVDPNLHSHLARTLGWSLERIDSMLNNESGLLGLSDL SNDMRTLEQEREQGHPGAALAIEVFCYRLAKSLAAMSCALPQLDGVIFTGGIGENSPL VRAKTAAHLRLFDLRLDQEANARCVRGVAGPIQAAGHPRVLVIPTNEERQIALDTLAL LD" misc_feature complement(911598..912770) /gene="ackA" /locus_tag="PA0836" /note="acetate kinase A/propionate kinase 2; Reviewed; Region: PRK00180" /db_xref="CDD:234680" gene 912791..912861 /locus_tag="PA0836.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965625" ncRNA 912791..912861 /ncRNA_class="other" /locus_tag="PA0836.1" /product="P5" /db_xref="GeneID:6965625" gene 913086..913571 /gene="slyD" /locus_tag="PA0837" /db_xref="GeneID:880885" CDS 913086..913571 /gene="slyD" /locus_tag="PA0837" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase SlyD" /protein_id="NP_249528.1" /db_xref="GeneID:880885" /translation="MQIAANKAVSIDYTLTNDAGDVIDSSAGGAPLVYLHGAGNIIVG LEKALEGKNVGDELSVAIEPEDAYGEYSAELVATLTREMFEGVDELEVGMQFHASAPD GGMQIVTIRDIDGDDVTVDGNHPLAGQRLNFKVKVVDVREANAEEIAHGHIHGEGGHH H" misc_feature 913092..913505 /gene="slyD" /locus_tag="PA0837" /note="Peptidyl-prolyl cis-trans isomerase, FKBP type [Posttranslational modification, protein turnover, chaperones]; Region: SlpA; COG1047" /db_xref="CDD:440668" gene 913777..914259 /locus_tag="PA0838" /db_xref="GeneID:879443" CDS 913777..914259 /locus_tag="PA0838" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutathione peroxidase" /protein_id="NP_249529.1" /db_xref="GeneID:879443" /translation="MSAFHDLTLQGLDGQDLPLSPFKGKVLLVVNVASKCGLTPQYAG LENLYQTYRERGFAVLGVPCNQFAGQEPGSEADIQSFCSLNYGVSFPMSAKVEVNGSA RHPLYRLLAGEGAEFPGDITWNFEKFLLGPDGRVLARFSPRTAPDDPALVQAIEKALG " misc_feature 913777..914253 /locus_tag="PA0838" /note="Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid transport and metabolism]; Region: BtuE; COG0386" /db_xref="CDD:440155" gene 914412..915002 /locus_tag="PA0839" /db_xref="GeneID:882078" CDS 914412..915002 /locus_tag="PA0839" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249530.1" /db_xref="GeneID:882078" /translation="MTSNRLDKRELILAKGSEVMTRRGYHGTGVLEIVQAARIPKGSF YHYFDSKEAFAQQALEHVYAPRLARYAQALGDSRFSPRERVLRYYGELLEHFARQEKP EYHCFIGSLSFEMAELSPPIAAKVESILQASAQILQDCLEQAREAGELAADEDCASLA GFIGFAWQGALARFKVGAGLAPLNAFMSRLELLLRA" misc_feature 914415..914918 /locus_tag="PA0839" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene 915043..916155 /locus_tag="PA0840" /db_xref="GeneID:881988" CDS 915043..916155 /locus_tag="PA0840" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_249531.1" /db_xref="GeneID:881988" /translation="MSAPVEALFQPFRLGALELPTRVVMAPMTRNFSPGGVPNAKVVE YYRRRAAAGVGLIVSEGTTVGHKAANGYPNVPRFYGEDALAGWKQVVDAVHAEGGRIV PQLWHVGSVRRLGVEPDASVPGYGPMEKAKDGKVLVHGMSKADIQEVIAAFAQAARDA QAIGMDGVEIHGAHGYLIDQFFWEGSNQRDDEYGGSLANRSRFAVELVRAVRAAVGAD FPIIFRFSQWKQQDYSARLVETPEGLREFLAPLVEAGVDIFHCSTRRFWIPEFEGSEL NLAGWTRELTGKPTITVGNVGLDGSEFLQFFGKTDEVAQPASIDGLVERLDKGEFDLV AVGRALLVDPEWAVKVREGRIGDIKPFSREALASLV" misc_feature 915064..916152 /locus_tag="PA0840" /note="Old yellow enzyme (OYE)-related FMN binding domain, group 5. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as...; Region: OYE_like_5_FMN; cd04747" /db_xref="CDD:240095" misc_feature order(915121..915123,915127..915129,915223..915225, 915352..915354,915568..915570,915724..915726, 916051..916056) /locus_tag="PA0840" /note="putative active site [active]" /db_xref="CDD:240095" misc_feature order(915121..915123,915127..915129,915223..915225, 915352..915354,915724..915726,916051..916056) /locus_tag="PA0840" /note="putative FMN binding site [chemical binding]; other site" /db_xref="CDD:240095" misc_feature order(915562..915564,915568..915570) /locus_tag="PA0840" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:240095" misc_feature 915568..915570 /locus_tag="PA0840" /note="putative catalytic residue [active]" /db_xref="CDD:240095" gene 916346..917305 /locus_tag="PA0841" /db_xref="GeneID:882002" CDS 916346..917305 /locus_tag="PA0841" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249532.1" /db_xref="GeneID:882002" /translation="MRIGLVVDATCDLPPEFLAAHGIRVMPIGIRLGEQRLIDRRDPD TTLSFYRDHLPKVGSKDGSQPLSAAELQQWFLDELVTDFDYVVCLTVDSLRSPIFEHA TQASFGLLQHYHERRHAAGIAGPFTLRVLDSHSVFAGIACLAAEGTRLLAQGSHPNAL RTRLEQLSQQTCTYLVADDLGHLRRRGFQKGDRSGFVDRVKGAALGLGSLLDVKPVFS LADGEDKPVALSPSFEKSAEKLFGYALARVQAGELLAPQLGLSYAGDPTALRDLPGFA ALENACRERDIHLHLGMLSPTGGINLGAGAMSLGFIATPKAFA" misc_feature 916349..917284 /locus_tag="PA0841" /note="Uncharacterized protein, DegV family COG1307; Region: DegV; pfam02645" /db_xref="CDD:426899" gene complement(917309..918529) /locus_tag="PA0842" /db_xref="GeneID:882105" CDS complement(917309..918529) /locus_tag="PA0842" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycosyl transferase family protein" /protein_id="NP_249533.1" /db_xref="GeneID:882105" /translation="MSRPLSIALISETYPPEVNGVANTLGRLHAGLQQLGHRVQVVRP RQPGDDGRRSDAELVLTRGWPLPGYPGLQWGMSSLHKLLRCWKRQRPDVLYIATEGPL GFSALRAARRLGIPAVSGFHTNFQQYSEHYGFGPLTRLVTGYLRWFHNRTQMTLVPSG SQRMELQRRGFERLNLLSRGVDSQLFHPSRRDPELRRRWGLGEQDIAVLHVGRLAAEK NLGLLGGTFRALCAAHPQLKLRLVLVGDGPERKHLERDLPEALFCGVQRGETLAAHYA SGDLFLFPSLSETFGNVVLEAQAAGLAVVAFDQAAAGQHIRHGHNGVLAAPGDKSGFV EVASWLLDDQERLRRVRLNARQHASRQGWDSIVEHFQNYLEDACASPLVQPARSKPER PPAEDGGALPRSRE" misc_feature complement(917405..918511) /locus_tag="PA0842" /note="glycosyltransferase family 4 proteins; Region: GT4-like; cd03814" /db_xref="CDD:340842" gene complement(918617..919240) /gene="plcR" /locus_tag="PA0843" /db_xref="GeneID:882099" CDS complement(918617..919240) /gene="plcR" /locus_tag="PA0843" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phospholipase C accessory protein PlcR" /protein_id="NP_249534.1" /db_xref="GeneID:882099" /translation="MRPTLTWTLLALLLCGTAIGAVLLFYPSEPAPVAPFASPPQATP AAKPSIPSRAPEMNTATAPDNLEQQLGEFGRNAGQMSEIERKQAAEGLIEQLKREVAV GADPRQTFEEIQRLTPYVEADARRREALDFEIWMALKDNASVQQQAPTPGEEEQLREY AQESDKVIAEVLASVDDEEQRHAAIDERLKALRKQIFGEENPRLLQR" misc_feature complement(918623..919045) /gene="plcR" /locus_tag="PA0843" /note="phospholipase C accessory protein PlcR; Region: plc_access_R; TIGR03398" /db_xref="CDD:132439" gene complement(919258..921450) /gene="plcH" /locus_tag="PA0844" /db_xref="GeneID:879296" CDS complement(919258..921450) /gene="plcH" /locus_tag="PA0844" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="hemolytic phospholipase C" /protein_id="NP_249535.1" /db_xref="GeneID:879296" /translation="MTENWKFRRRTFLKHGAQAATLAGLSGLFPETLRRALAVEPDIR TGTIQDVQHVVILMQENRSFDHYFGHLNGVRGFNDPRALKRQDGKPVWYQNYKYEFSP YHWDTKVTSAQWVSSQNHEWSAFHAIWNQGRNDKWMAVQYPEAMGYFKRGDIPYYYAL ADAFTLCEAYHQSMMGPTNPNRLYHMSGRAAPSGDGKDVHIGNDMGDGTIGASGTVDW TTYPERLSAAGVDWRVYQEGGYRSSSLWYLYVDAYWKYRLQEQNNYDCNALAWFRNFK NAPRDSDLWQRAMLARGVDQLRKDVQENTLPQVSWIVAPYCYCEHPWWGPSFGEYYVT RVLEALTSNPEVWARTVFILNYDEGDGFYDHASAPVPPWKDGVGLSTVSTAGEIEVSS GLPIGLGHRVPLIAISPWSKGGKVSAEVFDHTSVLRFLERRFGVVEENISPWRRAVCG DLTSLFDFQGAGDTQVAPDLTNVPQSDARKEDAYWQQFYRPSPKYWSYEPKSLPGQEK GQRPTLAVPYQLHATLALDIAAGKLRLTLGNDGMSLPGNPQGHSAAVFQVQPREVGNP RFYTVTSYPVVQESGEELGRTLNDELDDLLDANGRYAFEVHGPNGFFREFHGNLHLAA QMARPEVSVTYQRNGNLQLNIRNLGRLPCSVTVTPNPAYTREGSRRYELEPNQAISEV WLLRSSQGWYDLSVTASNTEANYLRRLAGHVETGKPSRSDPLLDIAAT" misc_feature complement(919273..921426) /gene="plcH" /locus_tag="PA0844" /note="phospholipase C, phosphocholine-specific, Pseudomonas-type; Region: PC_PLC; TIGR03396" /db_xref="CDD:274561" gene complement(921792..923804) /locus_tag="PA0845" /db_xref="GeneID:880698" CDS complement(921792..923804) /locus_tag="PA0845" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="neutral ceramidase" /protein_id="NP_249536.1" /db_xref="GeneID:880698" /translation="MSRSAFTALLLSCVLLALSMPARADDLPYRFGLGKADITGEAAE VGMMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARL KAKYPGVYDENNVMLAATHTHSGPGGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIER AQARLQPGRLFYGSGELRNANRNRSLLSHLKNPDIVGYEDGIDPQMSVLSFVDANGEL AGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSRKSGFVAAFAQTNAGNLSPN LNLKPGSGPFDNEFDNTREIGLRQFAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIR PEFTDGQPRQLCTAAIGTSLAAGSTEDGPGPLGLEEGNNPFLSALGGLLTGVPPQELV QCQAEKTILADTGNKKPYPWTPTVLPIQMFRIGQLELLGAPAEFTVMAGVRIRRAVQA ASEAAGIRHVVFNGYANAYASYVTTREEYAAQEYEGGSTLYGPWTQAAYQQLFVDMAV ALRERLPVETSAIAPDLSCCQMNFQTGVVADDPYIGKSFGDVLQQPRESYRIGDKVTV AFVTGHPKNDLRTEKTFLEVVNIGKDGKQTPETVATDNDWDTQYRWERVGISASKATI SWSIPPGTEPGHYYIRHYGNAKNFWTQKISEIGGSTRSFEVLGTTP" misc_feature complement(922302..923720) /locus_tag="PA0845" /note="Neutral/alkaline non-lysosomal ceramidase, N-terminal; Region: Ceramidase_alk; pfam04734" /db_xref="CDD:461415" misc_feature complement(921810..922298) /locus_tag="PA0845" /note="Neutral/alkaline non-lysosomal ceramidase, C-terminal; Region: Ceramidse_alk_C; pfam17048" /db_xref="CDD:465340" gene complement(924182..924922) /locus_tag="PA0846" /db_xref="GeneID:880298" CDS complement(924182..924922) /locus_tag="PA0846" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sulfate transporter CysZ" /protein_id="NP_249537.1" /db_xref="GeneID:880298" /translation="MPALSGPQYLGEGLKLIMRPGLRLFVLIPLTLNLLVFALLIGFA MQQFSHWVDLLMPSLPDWLSFLQYIVWPLFVLLVLVIVFFTFTMVANIISAPFNGFLS EKVEVVVRGRDDFPPFSWAELLAMIPRTMGREMRKLAYFLPRALVLLVLSFVPGVNLI ATPLWILFGIWMMAVQYIDYPADNHKLGWNEMLAWLRSKRWACMGFGGVTYLALLIPL VNLVMMPAAVAGATLFWVREEGERALVK" misc_feature complement(924185..924922) /locus_tag="PA0846" /note="putative sulfate transport protein CysZ; Validated; Region: PRK04949" /db_xref="CDD:179898" protein_bind 924396..924408 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0846" /bound_moiety="AmrZ" gene complement(925007..927214) /locus_tag="PA0847" /db_xref="GeneID:882143" CDS complement(925007..927214) /locus_tag="PA0847" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249538.1" /db_xref="GeneID:882143" /translation="MEPSPRTAAAVKSGACLLTSTLIARLLEGWVAPDDARLPEEYAA QVTQPRRCIEMSNFNSHDRVSLCSQPAARLMLSPITRPHRMPLRTRLLWLFLPLLAAS LGGIWLLSESILLSRFDREDQQRLQEGATVLHNRLDFELKRHLDIVRTYAWWDASYDF IQRPNETFEQENLDHEMLDDLGFDFVLFLDDRGHLQLKQWSPPAPDQRVLFGAPSASD QALLEALQQRAIRLGALDFRGRTDHSLSELLLVDNLPTLLVSVPISNNQGSAPAKGAI LAGYFLDRERLANLREQMQADLQPMPNIATDSTWKPLRSRSGSTHNQALLSPRRFIGE HVQQVSVQYLSSSGEPQLRFDITKKRLLYIQGEKAINFFLGASLLVALGAFLVGYLAL ELWVLRRVQRLNREVAEVGRNAHSIRLSDFGNDELGQLAGEMNQMLERLEHSEARDRA ILQSMRDGYFEMDVDGVILTVNPALCQLLGQTRETLIGHPYYELLGEDDLARARQPFQ RAMQSGAGKTFAIPLQRADGSLGYFEATVSLIHDLQGELRGYRGIVRDVSDQIAYQQQ LLEMAYRDPLTGLGNRKAFDEQLGQALLRAGSGGSELALLYLDLDRFKEVNDRFGHDI GDALLRTVAERVRSTLRQPDKAYRLGGDEFAVLLEDSQENNPQRLAERLLAALVQPIA LNGERIDFVTPSIGIALYPRHAGDAEGLVRAADSAMYEAKRQRNHYCLYQAPA" misc_feature complement(926318..926806) /locus_tag="PA0847" /note="CHASE4 domain; Region: CHASE4; pfam05228" /db_xref="CDD:428380" misc_feature complement(<925016..926110) /locus_tag="PA0847" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" protein_bind 927016..927052 /experiment="Beta-gal reporter assay [PMID: 10913087]" /experiment="EMSA [PMID: 10913087]" /note="Transcription factor binding site for NP_254031.; Evidence of regulation for: PA0848" /bound_moiety="OxyR" gene 927147..927746 /locus_tag="PA0848" /db_xref="GeneID:877588" CDS 927147..927746 /locus_tag="PA0848" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase" /protein_id="NP_249539.1" /db_xref="GeneID:877588" /translation="MSVLVNKQAPDFTAAAVLGDGSIVDAFQLSSLRGKYVVLFFWPL DFTFVCPSEIIAHNNRMDKFRELGVEVVGVSIDSQFTHHAWRSTPVEKGGIGAVEFTM VADVKHEITRAYGIEHEDGVALRASFLIDRAGVVQHQVVNNLPLGREVDEMVRLVEAL QFTEEHGEVCPAGWRKGQKGMKASAEGVASYLAENAEAL" misc_feature 927147..927737 /locus_tag="PA0848" /note="Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin) [Defense mechanisms]; Region: AhpC; COG0450" /db_xref="CDD:440219" gene 927880..928830 /gene="trxB2" /locus_tag="PA0849" /db_xref="GeneID:882024" CDS 927880..928830 /gene="trxB2" /locus_tag="PA0849" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="thioredoxin reductase" /protein_id="NP_249540.1" /db_xref="GeneID:882024" /translation="MPDTLRHARVIILGSGPAGYSAAVYAARANLKPLLITGMQAGGQ LTTTTEVDNWPGDPHGLTGPALMQRMQEHAERFETEIVFDHIHAVDLAGKPFTLRGDN GTYTCDALIVATGASARYLGLPSEQAFMGKGVSACATCDGFFYRNREVAVIGGGNTAV EEALYLANIASRVTLVHRRETFRAEKILQDKLQARVAEGKIVLKLNAEVDEVLGDTMG VTGVRLKTRDGGSEEIAVDGMFVAIGHTPNTSLFEGQLALKDGYLVVNGGREGNATAT NVPGVFAAGDVADHVYRQAITSAGAGCMAALDVERYLDSL" misc_feature 927889..928827 /gene="trxB2" /locus_tag="PA0849" /note="thioredoxin reductase; Provisional; Region: PRK10262" /db_xref="CDD:182343" protein_bind complement(928587..928599) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 929084..929503 /locus_tag="PA0850" /db_xref="GeneID:882012" CDS 929084..929503 /locus_tag="PA0850" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249541.1" /db_xref="GeneID:882012" /translation="MFLSPSAICLLGLIAWTLLLVFLLVSQRGLLVLGGRMAVNAFAA DGSNTPGGFGQRLVRVHANCVENLPLLAGALLYAIASGQSSLTDPLAPLVLGARLFQS LMHLVSTSALFVWLRFAGFFVQLLVLAWWLLLLAGLA" misc_feature 929102..929452 /locus_tag="PA0850" /note="MAPEG family; Region: MAPEG; pfam01124" /db_xref="CDD:460074" gene complement(929514..930476) /locus_tag="PA0851" /db_xref="GeneID:882054" CDS complement(929514..930476) /locus_tag="PA0851" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249542.1" /db_xref="GeneID:882054" /translation="MPFSLAALQQAAAIVHQSLPPTPQIRWPLLCEALGCEVWMKHEN HLPVGAFKLRGGLVYFHHLAHQGERPAAVISATRGNHGQSVAFSASRYGIQPIIVVPH GNSREKNAAMRSLGAELIEHGEDFQASREYAAERARREGLHLIPAFHPWLVAGVASYS LELFAALADLDEVYVPIGMGSGICGLIAARDALGLKTRIVGVVSAHAPAYALSFEAGT AISHPVDTRLADGMACSTPDPSALEMILAGADRLVRVSDREIGAAMRLCFTSTHNVAE GAGVAALAAAWQERERLKGLKVGLILSGANVDREVFAEQLAAGD" misc_feature complement(929517..930476) /locus_tag="PA0851" /note="threonine dehydratase; Region: PRK06110" /db_xref="CDD:235699" gene complement(930653..931822) /gene="cbpD" /locus_tag="PA0852" /db_xref="GeneID:877771" CDS complement(930653..931822) /gene="cbpD" /locus_tag="PA0852" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="chitin-binding protein CbpD" /protein_id="NP_249543.1" /db_xref="GeneID:877771" /translation="MKHYSATLALLPLTLALFLPQAAHAHGSMETPPSRVYGCFLEGP ENPKSAACKAAVAAGGTQALYDWNGVNQGNANGNHQAVVPDGQLCGAGKALFKGLNLA RSDWPSTAIAPDASGNFQFVYKASAPHATRYFDFYITKDGYNPEKPLAWSDLEPAPFC SITSVKLENGTYRMNCPLPQGKTGKHVIYNVWQRSDSPEAFYACIDVSFSGAVANPWQ ALGNLRAQQDLPAGATVTLRLFDAQGRDAQRHSLTLAQGANGAKQWPLALAQKVNQDS TLVNIGVLDAYGAVSPVASSQDNQVYVRQAGYRFQVDIELPVEGGGEQPGGDGKVDFD YPQGLQQYDAGTVVRGADGKRYQCKPYPNSGWCKGWDLYYAPGKGMAWQDAWTLL" misc_feature complement(<931157..931762) /gene="cbpD" /locus_tag="PA0852" /note="Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains [General function prediction only]; Region: COG3397" /db_xref="CDD:442624" misc_feature complement(930878..931174) /gene="cbpD" /locus_tag="PA0852" /note="N-acetylglucosamine binding protein domain 2; Region: GbpA_2; pfam18416" /db_xref="CDD:465759" gene complement(932102..932725) /locus_tag="PA0853" /db_xref="GeneID:881941" CDS complement(932102..932725) /locus_tag="PA0853" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_249544.1" /db_xref="GeneID:881941" /translation="MVETAKTGATPLEGDGKRILLIVGSPKRKSFCHLLAECYAQGAR SKDHVVRELKLGELAFDPILHEGYEQSQVLEPDLLEAQRQIHWAEHLVFVYPVWWGGL PALLQGFFDRVLQPGFAFRYRGTQDKDWEQLLGGRSADLLVCHDQPLSRLRFLKGPPA HRQMVRSVLGACGIATRRLEEFAPMRSSSEEQRQGWLRRAEQLGSQV" misc_feature complement(932108..932674) /locus_tag="PA0853" /note="Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only]; Region: MdaB; COG2249" /db_xref="CDD:441850" gene complement(932718..934112) /gene="fumC2" /locus_tag="PA0854" /db_xref="GeneID:878044" CDS complement(932718..934112) /gene="fumC2" /locus_tag="PA0854" /EC_number="4.2.1.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="fumarate hydratase" /protein_id="NP_249545.1" /db_xref="GeneID:878044" /translation="MSRTETDSLGTIEVPDDAYWGAQTQRSLENFAIGGQRMPLAVIH ALALIKKAAARVNDHLGELPPEVARLIEQAADEVLAGRHDEHFPLVVWQTGSGTQTNM NVNEVIAGRANELAGNPRGGKSPVHPNDHVNRAQSSNDSFPTAMHIAAAKAVHEQLLP AIAELSGGLAEQSARHASLVKTGRTHLMDATPITFGQELSAFVAQLDYAERAIRAALP AVYQLAQGGTAVGTGLNAPKGFADAIAAEIAAESGLPFVAAPNKFAALAGHEPLVILS GALKSLAVALMKIANDLRLLGSGPRAGFAEVKLPANEPGSSIMPGKVNPTQCEALSML ACQVMGNDSTISFAASQGHLQLNVFKPVIVYNLLESIRLLADGCRNFNKHCVAGLEPD AQRMADLLERGLMLVTALNPHIGYDKAAEIAKKAYAEGTTLRAAALQLGYLDEAQFDE WVRPEQMLEAGHHG" misc_feature complement(932721..934112) /gene="fumC2" /locus_tag="PA0854" /note="class II fumarate hydratase; Region: PRK12425" /db_xref="CDD:171490" gene complement(934241..935260) /locus_tag="PA0855" /db_xref="GeneID:882112" CDS complement(934241..935260) /locus_tag="PA0855" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249546.1" /db_xref="GeneID:882112" /translation="MNGTAADTLAVSPPPLRNLCDGHGRLDPRAVGWSARPRVLCHIP GHFGRRKRWNHWCIVSPGWMLSLTIADLDYLTYGAAYFLDLDSGQAVAHTQIRFFGLG CQLPDEPQASHAFEHPRLQLRFDEQPGRLRVTGQAPDLGGLPLELALEVRRPSHLESV NLVVPMGEHTFHACSRQLGLPISGCLQLGRRRYDCQAGQSFAALDFGRGVWPLHTYWT RAAFAAPGGIAGNFGTGWTEASDLRENALWFGGKLSRVLDDVHIREPRDPLAEWRLDS ACGRVELLFRPEQLHQARPSVGLFYANTRQWFGRFNGTLRHDDGDCVPVDGALGWIGS TRARW" misc_feature complement(934247..935194) /locus_tag="PA0855" /note="Protein of unknown function (DUF2804); Region: DUF2804; pfam10974" /db_xref="CDD:431569" protein_bind complement(935326..935341) /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA0855" /bound_moiety="LasR" gene 935427..935975 /locus_tag="PA0856" /db_xref="GeneID:879247" CDS 935427..935975 /locus_tag="PA0856" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249547.1" /db_xref="GeneID:879247" /translation="MSGPTDTSTQPQGFSMTRLRLIGSAVLLSLSSMAMADSASQAEQ FLKLVHADKLTVPVYAQVQQMLAQRFAQAKAPESKKAVLERYQAKANAELDRAIGWDK IKPELIKLYTTNFTESELKDLNAFYQSPLGKKVLEKMPRLTAESAQLTQAKLQGAVEP VNKLMADMDKELGVAAPAQKKK" misc_feature 935472..935957 /locus_tag="PA0856" /note="Uncharacterized conserved protein, contains DUF2059 domain [Function unknown]; Region: COG3184" /db_xref="CDD:442417" gene 935989..936294 /gene="bolA" /locus_tag="PA0857" /db_xref="GeneID:880702" CDS 935989..936294 /gene="bolA" /locus_tag="PA0857" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="morphogene protein BolA" /protein_id="NP_249548.1" /db_xref="GeneID:880702" /translation="MSMRDRIQTALQPLDPQHVEVLDESHMHSRGLETHFKVVLVSPQ FAGLNAVKRHQKVYATLGGLMGEFHALALHTFTPEEWSQAAVPASPTCRGGSKHDIP" misc_feature 935989..936237 /gene="bolA" /locus_tag="PA0857" /note="DNA-binding global transcriptional regulator BolA, affects cell shape, cell division and biofilm formation [Transcription, Signal transduction mechanisms]; Region: BolA; COG0271" /db_xref="CDD:440041" gene 936459..937397 /locus_tag="PA0858" /db_xref="GeneID:877907" CDS 936459..937397 /locus_tag="PA0858" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249549.1" /db_xref="GeneID:877907" /translation="MTSIVVAALYKFVTLDDYVALREPLLQTLLDNGVKGTLLLAEEG INGTVSGSREGIDALFAWLRSDPRLADIEHKESYCDEQPFYRTKVKLKKEIVTLGVPG VDPNKQVGQYVEAKDWNALISDPEVLLIDTRNDYEVAIGTFEGAVDPKTRSFREFPEY IKAHYDPARHKKVAMFCTGGIRCEKASSYMLGAGFEEVFHLKGGILKYLEEVPQEQSL WRGDCFVFDNRVTVRHDLSEGEYDQCHACRNPVSLEDRQSEHYVPGISCPHCWDSLSE KTRAGARERQKQIELARQRNQPHPLGRDPRQSTLEN" misc_feature 936459..937343 /locus_tag="PA0858" /note="tRNA U34 5'-hydroxylase TrhO, rhodanese family [Translation, ribosomal structure and biogenesis]; Region: TrhO; COG1054" /db_xref="CDD:440674" gene 937437..938039 /locus_tag="PA0859" /db_xref="GeneID:882146" CDS 937437..938039 /locus_tag="PA0859" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249550.1" /db_xref="GeneID:882146" /translation="MCSWCWGFAPVAEALSRQAAADGVAFHLVAGGLRAGHGAALDPN TRGYILGHWQTVQQTTGQPFRFDDALPDGFVYDTEPACRALVAARSLDEESAWPLVRA IQRAFYAEGRDVTQAAVLAGLAEAVGLPRIEFAAAFDSGEARDATAADFAWVQDLGIA GFPTLLAERNGQLALLTNGYQPLAELSPLLGRWLERGRHE" misc_feature 937437..938015 /locus_tag="PA0859" /note="Predicted protein-disulfide isomerase, contains CxxC motif [Posttranslational modification, protein turnover, chaperones]; Region: COG3531" /db_xref="CDD:442753" gene 938032..939822 /locus_tag="PA0860" /db_xref="GeneID:882151" CDS 938032..939822 /locus_tag="PA0860" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein/permease" /protein_id="NP_249551.1" /db_xref="GeneID:882151" /translation="MSERGDRLSWAEIRRLALRHKKALLFANLVAVLATLCTVPIPLL LPLLVDEVLLGKGDGALRFMDRLLPADWQVAFGYIGLMLAATLLLRGAALVFNVLQAK LFARLSKDIVYRIRLRLIERLRHIALGEYETLGGGSISAHLVTDLDTLDKFVGETLSR FLVALLTLLGTAAILVWMHWQLALLILLFNPLVIWSTVQLGKRVKHLKKLENDSTARF TQALTETLEAIQEVRAGNRQGYFLGRLGHRAQEVRDYAVASQWKSDAAGRASGLLFQF GIDVFRAAAMLTVLLSDLSIGQMLAVFSYLWFMIGPVEQLLGLQYAYYAAGGALQRIN ELLARADEPRYPPLRDPFAGRTTVGIEVRGLDFAYGEDKVLEQLDLNIGAGEKVALVG ASGGGKSTLVQLLLGLYSAQRGSIRYGGVPLEEIGLDCVREHVAVVLQHPALFNDSVR ANLTMGRERSDQACWRALEIAQLADGVRRLPQGLDTVVGRSGVRLSGGQRQRLAIARM ILAEPKVVILDEATSALDAATEYALHQALGDFLEGRTTLIVAHRLSAVKQADRVLVFD GGHIAEDGDHQQLIAEGGLYARLYGHLQQM" misc_feature 938032..939819 /locus_tag="PA0860" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:440747" gene 940117..942573 /locus_tag="PA0861" /db_xref="GeneID:882259" CDS 940117..942573 /locus_tag="PA0861" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249552.1" /db_xref="GeneID:882259" /translation="MRQNRTLDKPRLLGLVWPFIVVVLLQAMLAGGSLYVLSAVRSYV GGESLWSKGQKDAIYYLTLYADSRADEDFRRYEEAIAIPLGDREMRLALDQPDPDIEA ARQGILKGGNHADDVTAIIWLYRNFHDFSYFERAIELWLVGDKYVMELIDVAGKMRAG IGTGQASAEQVQQWKTEIHAINEKVTPAAKAFSDALGEGSRALLRLLLVANLTTASVL ILLAFLRTRQQLMQRQEVENALDAERERAQITLASIGDGVITADTQGGISYLNPAAEQ MTNWTLDKARGLPLASLFRIVDESSREEGMLLIEQILSGEIDGGREHSKLVLRHDGSS VPVTLVGAPIHRGAEITGVVLVLHDMTRERQYMARLSWQATHDALTGLTNRREFEYRL QIALERLERNSGRHALMFLDLDQFKLVNDTCGHAAGDELLRQVCTLLQQGLREGDTLA RLGGDEFGILLENCPAEKAVEIADHLRKTIQDLHFTWSGQPFNCTVSVGLVHLLPGIS TLEEALRSADMACYMAKEKGRNRVQVFHQDDVELSMRFGEMTWVQRIHLALEEDRFSL YAQPIVPLGEGAEEGLHVELLLRLRDEGGRLVPPLSFIPAAERYGLMTLIDRWVVENA FRTLVERAQDPRAEPIGTCAINLSGATIGDESFLQFLTELFARYRIPPQTICFEVTET VAVANLASAIRFINELKDTGCRFSLDDFCAGMSSFIYLKHLPVDYLKIDGSFVKDMLE DPIDRAMVQVINHIGHVMGKRTIAEFVETVEVMEALREIGIDYAQGLAIGAPLPFSRQ PPGAGVDAQGLWSSLGQNLR" misc_feature <940810..942507 /locus_tag="PA0861" /note="putative diguanylate cyclase; Provisional; Region: PRK09776" /db_xref="CDD:182070" gene 942648..943430 /locus_tag="PA0862" /db_xref="GeneID:882204" CDS 942648..943430 /locus_tag="PA0862" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249553.1" /db_xref="GeneID:882204" /translation="MSEFFDRTGPLQEAGSYPQWAQQLIVDCQASKDRVSGHELYRRM RDAELSPALMRLYLIGGWPVVEQFPLYMSQNLLKTRFARHPGEDMARRWLMRNIRVEL NHADYWLHWAEAHGVSLAEIQAQDVPAELHALSHWCWHTCASDSLAVAMAATNYAIEG VTGEWSALVCSNGVYENAFPKEGRKRAMKWLKLHAQYDDAHPWEALEIICTLAGTNPS AELRRQLRDAICKSYDYMYLFLERCMQLEEARSARKLAVGAE" misc_feature 942702..943382 /locus_tag="PA0862" /note="Pyrroloquinoline quinone (PQQ) biosynthesis protein C [Coenzyme transport and metabolism]; Region: PqqC; COG5424" /db_xref="CDD:444176" gene complement(943482..944441) /locus_tag="PA0863" /db_xref="GeneID:882218" CDS complement(943482..944441) /locus_tag="PA0863" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_249554.1" /db_xref="GeneID:882218" /translation="MKALQFDRTGDLAALELVDMPDPLPAADEVRVEIRAAGLNPSDV KNVLGRFPYTTLPRVPGRDFAGVVVEGPKALLGQAVWGTGREPGFFRDGSHAQFLTLP AAGVALKPESLSFAQAASCGVPYSTAWDALQRSQVKAGTRLLVIGANGAVGKAALALA KALGAEAIGAVRREEQRQALETQGIAALLLGEPAELAAQVEGIFPGGAEVIFDTTGFW LEAAVPALAAFGRLAIIAAPADGHVRLPALNLYRRGGSVVGINSLLYGVEACAGFLDA FGKLFDQGRLPLPDGLREVPLEQGVEQYRAVNEGTCEKIILVP" misc_feature complement(943485..944441) /locus_tag="PA0863" /note="NADPH:quinone reductase or related Zn-dependent oxidoreductase [Energy production and conversion, General function prediction only]; Region: Qor; COG0604" /db_xref="CDD:440369" gene complement(944724..945512) /locus_tag="PA0864" /db_xref="GeneID:882030" CDS complement(944724..945512) /locus_tag="PA0864" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249555.1" /db_xref="GeneID:882030" /translation="MARPAPPDLSDSRRPLRGVARSYPAGHRVDAHEHAWGQVLYAVS GMMWLETPDEALPVPPQRAVWLPPGLRHAVRVASELQMRNIYLSPELSRGLEDRTLVL VVGPLLRELIVSLVEQERQSDPHYYRALADLAVLELGRARRSSLRVPLPDASDRRLLA LCQAVMANPSLDIGLERLAEDAGASVRTLSRLFQRSLGMGFADWRRQVQLATAAAALI DGRPVAGIAHALGYTPSAFSDMFRRELGVSPTEYRAEHHQPFQP" misc_feature complement(945183..945467) /locus_tag="PA0864" /note="AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain; Region: cupin_NimR-like_N; cd06124" /db_xref="CDD:380379" misc_feature complement(944754..944999) /locus_tag="PA0864" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene 945834..946907 /gene="hpd" /locus_tag="PA0865" /db_xref="GeneID:882225" CDS 945834..946907 /gene="hpd" /locus_tag="PA0865" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="4-hydroxyphenylpyruvate dioxygenase" /protein_id="NP_249556.1" /db_xref="GeneID:882225" /translation="MNAVAKIEQHNPIGTDGFEFVEFTAPDAKGIEQLRQLFNMMGFT ETAKHRSKEVFLFQQNDINIVLNGSPTGHVHEFALKHGPSACAMAFRVKNASQAAAYA ESQGAKLVGSHANFGELNIPSLEGIGGSLLYLVDRYGDRSIYDVDFEFIEGRSANDNS VGLTYIDHLTHNVKRGQMDVWSGFYERIANFREIRYFDIEGKLTGLFSRAMTAPCGKI RIPINESADDTSQIEEFIREYHGEGIQHIALTTDDIYATVRKLRDNGVKFMSTPDTYY EKVDTRVAGHGEPLEQLRELNLLIDGAPGDDGILLQIFTDTVIGPIFFEIIQRKGNQG FGEGNFKALFESIEEDQIRRGVI" misc_feature 945876..946895 /gene="hpd" /locus_tag="PA0865" /note="4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism, General function prediction only]; Region: HppD; COG3185" /db_xref="CDD:442418" gene 947205..948623 /gene="aroP2" /locus_tag="PA0866" /db_xref="GeneID:882250" CDS 947205..948623 /gene="aroP2" /locus_tag="PA0866" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aromatic amino acid transporter AroP" /protein_id="NP_249557.1" /db_xref="GeneID:882250" /translation="MDGQHPHSGELKRGLKNRHIQLIALGGAIGTGLFLGSAGVLKSA GPSMILGYAIAGFIAFMIMRQLGEMIVEEPVAGSFSHFAHKYWGGFAGFLSGWNCWVL YILVGMSELTAVGKYIHYWWPEVPTWATAALFFVVVNAINLTNVKAFGEAEFWFAIIK VVAIIGMILLGCYLLFSGSGGPQASVSNLWAHGGFFPNGVSGLVMAMAIIMFSFGGLE MLGFTAAEADKPRTVIPKAINQVIYRILIFYIGALVVLLSLTPWDSLLQTLNASGDAY SGSPFVQIFSMIGSGTAAHLLNFVVLTAALSVYNSGTYCNGRMLLGLAEQGDAPRALA RVDKRGVPVRALVVSALVTFLAVVVNYVIPHQALELLMSLVVAALVINWAMISMAHLK FRAQMDRQGTRTHFRAFWYPYGNYLCMAFVVFILGVMLLIPGIQVSVYAIPVWLLVMW ACYRLKGAPRPMPGLRVKPVTE" misc_feature 947205..948572 /gene="aroP2" /locus_tag="PA0866" /note="Amino acid permease; Region: AA_permease_2; cl45918" /db_xref="CDD:459263" gene 948776..949159 /gene="mliC" /locus_tag="PA0867" /db_xref="GeneID:882238" CDS 948776..949159 /gene="mliC" /locus_tag="PA0867" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="lysozyme inhibitor" /protein_id="NP_249558.1" /db_xref="GeneID:882238" /translation="MKKALWLLLAAVPVVLVACGGSDDDKQTAQVDYLALPGDAKLDT RSVDYKCENGRKFTVQYLNKGDNSLAVVPVSDNSTLVFSNVISASGAKYAAGQYIWWT KGEEATLYGDWKGGEPTDGVACKER" misc_feature 948776..949156 /gene="mliC" /locus_tag="PA0867" /note="C-type lysozyme inhibitor; Region: PRK11372; cl01604" /db_xref="CDD:470265" gene 949280..949693 /locus_tag="PA0868" /db_xref="GeneID:878561" CDS 949280..949693 /locus_tag="PA0868" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="peptidyl-tRNA hydrolase" /protein_id="NP_249559.1" /db_xref="GeneID:878561" /translation="MLIISNAVHLPDHEIELNAIRAQGAGGQNVNKVSSAVHLRFDIQ ASSLPPFYKERLLALNDQRISGDGVVVIKAQQYRTQEQNREDALERLAELIRSVAKVQ KARRPTKPTRGSQKRRLDGKAKRGAVKAGRGKVDF" misc_feature 949280..949690 /locus_tag="PA0868" /note="aminoacyl-tRNA hydrolase; Region: PRK09256" /db_xref="CDD:181730" gene complement(949716..950648) /gene="pbpG" /locus_tag="PA0869" /db_xref="GeneID:877694" CDS complement(949716..950648) /gene="pbpG" /locus_tag="PA0869" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine endopeptidase" /protein_id="NP_249560.1" /db_xref="GeneID:877694" /translation="MRNRLLSLVTLFLSLSVATAVSASPPPKAGLPLQQELASGSALV TDQNTGKVLYSRNPDLVVPIASITKLMTAMVVLDSKLPLDEVLPIAISETSEMRGVFS RVRVGSQISRRDMLLLALMSSENRAAASLAQNYPGGKNAFVKAMNAKAHALGMKNTRY VEPTGLSLHNVSTARDLTRLLVASRQYPLLSQWSTTPEKTVAFRHPNYTLGFRNTNHL INNKTWNIQLTKTGFTNEAGHCLVMRTTINRSPVNLVVLDAFGKYTHFADATRLRRWL ETGQVTAIPAAAKAYRLQRDRERGLGQPVAQAVR" misc_feature complement(949740..950648) /gene="pbpG" /locus_tag="PA0869" /note="D-alanyl-D-alanine endopeptidase; Provisional; Region: pbpG; PRK11669" /db_xref="CDD:236952" gene complement(950962..952161) /gene="phhC" /locus_tag="PA0870" /db_xref="GeneID:880839" CDS complement(950962..952161) /gene="phhC" /locus_tag="PA0870" /EC_number="2.6.1.57" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="aromatic amino acid aminotransferase" /protein_id="NP_249561.1" /db_xref="GeneID:880839" /translation="MSHFAKVARVPGDPILGLLDAYRNDPRADKLDLGVGVYKDAQGL TPILRSVKLAEQRLVEQETTKSYVGGHGDALFAARLAELALGAASPLLLEQRADATQT PGGTGALRLAGDFIAHCLPGRGIWLSDPTWPIHETLFAAAGLKVSHYPYVSADNRLDV EAMLAGLERIPQGDVVLLHACCHNPTGFDLSHDDWRRVLDVVRRRELLPLIDFAYQGF GDGLEEDAWAVRLFAGELPEVLVTSSCSKNFGLYRDRVGALIVCAQNAEKLTDLRSQL AFLARNLWSTPPAHGAEVVAAILGDSELKGLWQEEVEGMRSRIASLRIGLVEALAPHG LAERFAHVGAQRGMFSYTGLSPQQVARLRDEHAVYLVSSGRANVAGLDARRLDRLAQA IAQVCAD" misc_feature complement(950974..952155) /gene="phhC" /locus_tag="PA0870" /note="aromatic amino acid transaminase; Region: PRK09257" /db_xref="CDD:181731" misc_feature complement(order(951397..951399,951421..951426, 951430..951432,951517..951519,951610..951612, 951766..951768,951844..951852)) /gene="phhC" /locus_tag="PA0870" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature complement(order(951280..951282,951289..951291, 951397..951405,951538..951540,951736..951738, 951841..951843)) /gene="phhC" /locus_tag="PA0870" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature complement(951421..951423) /gene="phhC" /locus_tag="PA0870" /note="catalytic residue [active]" /db_xref="CDD:99734" gene complement(952158..952514) /gene="phhB" /locus_tag="PA0871" /db_xref="GeneID:880827" CDS complement(952158..952514) /gene="phhB" /locus_tag="PA0871" /EC_number="4.2.1.96" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pterin-4-alpha-carbinolamine dehydratase" /protein_id="NP_249562.1" /db_xref="GeneID:880827" /translation="MTALTQAHCEACRADAPHVSDEELPVLLRQIPDWNIEVRDGIMQ LEKVYLFKNFKHALAFTNAVGEISEAEGHHPGLLTEWGKVTVTWWSHSIKGLHRNDFI MAARTDEVAKTAEGRK" misc_feature complement(952179..952475) /gene="phhB" /locus_tag="PA0871" /note="pterin-4-alpha-carbinolamine dehydratase; Validated; Region: phhB; PRK00823" /db_xref="CDD:234845" misc_feature complement(order(952242..952244,952284..952286, 952293..952295,952341..952343,952353..952355)) /gene="phhB" /locus_tag="PA0871" /note="aromatic arch; other site" /db_xref="CDD:238455" misc_feature complement(order(952275..952289,952293..952295, 952308..952310,952329..952331,952341..952343, 952350..952355)) /gene="phhB" /locus_tag="PA0871" /note="DCoH dimer interaction site [polypeptide binding]; other site" /db_xref="CDD:238455" misc_feature complement(order(952305..952310,952317..952319, 952326..952331,952347..952352)) /gene="phhB" /locus_tag="PA0871" /note="DCoH /HNF-1 dimer interaction site [polypeptide binding]; other site" /db_xref="CDD:238455" misc_feature complement(order(952305..952307,952317..952319, 952326..952331,952350..952352)) /gene="phhB" /locus_tag="PA0871" /note="DCoH tetramer interaction site [polypeptide binding]; other site" /db_xref="CDD:238455" misc_feature complement(order(952239..952244,952248..952250, 952293..952301)) /gene="phhB" /locus_tag="PA0871" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238455" gene complement(952619..953407) /gene="phhA" /locus_tag="PA0872" /db_xref="GeneID:879709" CDS complement(952619..953407) /gene="phhA" /locus_tag="PA0872" /EC_number="1.14.16.1" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phenylalanine 4-monooxygenase" /protein_id="NP_249563.1" /db_xref="GeneID:879709" /translation="MKTTQYVARQPDDNGFIHYPETEHQVWNTLITRQLKVIEGRACQ EYLDGIEQLGLPHERIPQLDEINRVLQATTGWRVARVPALIPFQTFFELLASQQFPVA TFIRTPEELDYLQEPDIFHEIFGHCPLLTNPWFAEFTHTYGKLGLKASKEERVFLARL YWMTIEFGLVETDQGKRIYGGGILSSPKETVYSLSDEPLHQAFNPLEAMRTPYRIDIL QPLYFVLPDLKRLFQLAQEDIMALVHEAMRLGLHAPLFPPKQAA" misc_feature complement(952622..953407) /gene="phhA" /locus_tag="PA0872" /note="phenylalanine 4-monooxygenase; Reviewed; Region: phhA; PRK11913" /db_xref="CDD:237020" misc_feature complement(order(952925..952927,952982..952984, 953138..953140,953147..953149,953153..953161, 953165..953167)) /gene="phhA" /locus_tag="PA0872" /note="cofactor binding site [active]" /db_xref="CDD:239464" misc_feature complement(order(952910..952912,953030..953032, 953045..953047)) /gene="phhA" /locus_tag="PA0872" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:239464" protein_bind 953666..953678 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 953691..955250 /gene="phhR" /locus_tag="PA0873" /db_xref="GeneID:878408" CDS 953691..955250 /gene="phhR" /locus_tag="PA0873" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator PhhR" /protein_id="NP_249564.1" /db_xref="GeneID:878408" /translation="MRIKVHCQNRVGILRDILNLLVDYGINVNRGEVGGDQGNAIYLL CPNMINLQLQSLRPKLEAVPGVFGVKRVGLMPSERRHLELNALLAALDFPVLSVDMGG QIVAANRAAAQLLGVRVDEVPGIPLSRYVEDLDLPELVRANKARINGLRVKVKGDVFL ADIAPLQSEHDESEALAGAVLTLHRADRVGERIYHVRKQELRGFDSIFQSSRVMAAVV REARRMAPLDAPLLIEGETGTGKELLARACHLASPRGQSPFMALNCAGLPESMAETEL FGYGPGAFEGARPEGKLGLLELTAGGTLFLDGVGEMSPRLQAKLLRFLQDGCFRRVGS DEEVYLDVRVICATQVDLSELCAKGEFRQDLYHRLNVLSLHIPPLRECLDGLAPLAEH FLDQASRQIGCGLPKLSAQALERLERYHWPGNVRQLENVLFQAVSLCEGGTVKAEHIR LPDYGAPQPLGDFSLEGDLDAIVGRFEKAVLERLFREHPSSRQLGKRLGVSHTTAANK LRQHGVGQSEG" misc_feature 953691..955238 /gene="phhR" /locus_tag="PA0873" /note="Transcriptional regulator TyrR of aromatic amino acids metabolism [Transcription, Amino acid transport and metabolism]; Region: TyrR; COG3283" /db_xref="CDD:442513" gene complement(955456..955722) /locus_tag="PA0874" /db_xref="GeneID:878390" CDS complement(955456..955722) /locus_tag="PA0874" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249565.1" /db_xref="GeneID:878390" /translation="MKAFALMALFACSPLVMAAGAQDQPASQQENAVEEYAYGMQLDV ARVISSTDTSNACGIVPARMTYEDSNGQKHTVEYQVWGNGCTGG" misc_feature complement(955468..955701) /locus_tag="PA0874" /note="Protein of unknown function (DUF2790); Region: DUF2790; pfam10976" /db_xref="CDD:431571" gene complement(955991..958186) /locus_tag="PA0875" /db_xref="GeneID:880758" CDS complement(955991..958186) /locus_tag="PA0875" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249566.1" /db_xref="GeneID:880758" /translation="MPRATRKGLPLVPPAPLAFFPSPDELRRALLEWARSDGVAWVFV FKALLTASLALWLAYHLELPQPSTVLVTVFIVMQTQSGQVLAKSFYRIVGTLIGLSVM VTLIALFAQERVLFLACLALWVGLCTAGAARYRDFRGYACVLAGYTATMIGIPATAHP EGAFMAALWRVLEISLGILCTGTVSAIFLPQTSGAALRNTLYGRFRDFAGFAAEGLQG SLDGERFGELSARFVAQSVGLENLRSATTFEDPHMRLRSGRLIRLNNEFMVMTSRFHG LHRLLERLRGRGAQNVLEVLAPCLAELAGLLAPIRERTPTDADAARLAERIEAYKPEL MQNIRQARQRLVEQRPGENDLLDFNTAAELAFRFTDDLHNYALTHASLAEHHHAREQW KESFVARANPVAALVAGARSALMIGLLGTFWIQTSWPHGGTFALTAVLISALSSTSPN PGRLSLQLTLGTLAGACTGLFVLLYLLPHVDGFPMLLCCLLPVFAVGALLLWRPQWNG YGVGLLVWFCFASLPANMARYDALAFFNEYLALLLSMVLATVAAMVILPPNRPWMWKR LEHDLRERVVFAISGKSKGLVSGFESGTRDLLNQAYTFSAGRPDVQRRLLGWMFLVLE VGQAIIELRLEQQRLPQEPCYAERTAWRRAIRLMGRALIRLFLQPGPSNRQRALHAVN QAIMAVRAAPEPRAPQFDTSPLRRVLSYLHFIRSALLDPQSPLGQERNP" misc_feature complement(956012..958066) /locus_tag="PA0875" /note="Fusaric acid resistance protein family; Region: FUSC; pfam04632" /db_xref="CDD:428044" gene 958406..959350 /locus_tag="PA0876" /db_xref="GeneID:879478" CDS 958406..959350 /locus_tag="PA0876" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249567.1" /db_xref="GeneID:879478" /translation="MDILFNMRAFVSVAETGSFTAAAQRLDLTTAYVSRAVAKLEAHL QTRLLHRTTRRIALTEAGQRYLMRAQQILAYIEEAEAEAGDAHARPSGTLKVHAMTGI GQHYLIKAISQYCETYPEVGFDLTLANRITDILDEGYDISVVIAPELPDSGFVSKCIG QTYSILCASPGYIAAHGFPKLPAELSAHRCLRLVNSVMSLDRWLFDGPDGQELACINQ THFQVNTADAMTEAVVSGMGIGALPVYAAVNGLKDGSLVRVLPRYSLFHLNVYALYPS RQYLDAKIRTWVEFLREHMPAMLAADEHSLAESGGLAN" misc_feature 958424..958594 /locus_tag="PA0876" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 958679..959278 /locus_tag="PA0876" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(958709..958711,958721..958723,958838..958840, 958883..958885,958889..958891,959081..959083, 959132..959134,959213..959215) /locus_tag="PA0876" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature order(958712..958717,958727..958732,958736..958741, 958748..958750,958760..958762,958766..958786, 958970..958972,959063..959077,959096..959101, 959108..959110) /locus_tag="PA0876" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene complement(959484..960380) /locus_tag="PA0877" /db_xref="GeneID:879690" CDS complement(959484..960380) /locus_tag="PA0877" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249568.1" /db_xref="GeneID:879690" /translation="MHFDLADLRLFIHIAESPSLTQGARRAFLSPAAASARVKALEGQ LGSRLLYRDSRGVELTPAGQRLLQHARLIMRQVEYLKSEFTEYGSDAAGHIRIFANTT AVTEFLPEILAGFLAARPGVTVDLQERLSRDIVRGVLDGSTDLGIIAGPVAASGLQVL HFSTDRLVMAVPQGHPLAGQARVRLRDTLQFQHIGLPEGTTLHAFLYERVEQMGEQLS LRIQVSSFEAICRMIEGGVGIGVIPQSAARRHSRTMKLATIELDEPWAIRERSLLVRD LEALPSCLRALIEELQRVGDSL" misc_feature complement(<959841..960380) /locus_tag="PA0877" /note="putative DNA-binding transcriptional regulator; Provisional; Region: PRK10837" /db_xref="CDD:182768" misc_feature complement(959508..960101) /locus_tag="PA0877" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold; Region: PBP2_LTTR_like_1; cd08421" /db_xref="CDD:176113" misc_feature complement(order(959676..959681,959685..959690, 959706..959723,959997..960017,960021..960023, 960033..960035,960042..960047,960051..960056)) /locus_tag="PA0877" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176113" gene 960497..961324 /locus_tag="PA0878" /db_xref="GeneID:877582" CDS 960497..961324 /locus_tag="PA0878" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249569.1" /db_xref="GeneID:877582" /translation="MSESAFAPWIGRQEETHDQLSRNLVKRIAATFGEPTPAHGEALP PLWHWAFFQDPVEAAGLGVDGHPARGGFLPPADDRNRMWAGGRLEFHQPLRVGGEASR TSTILRVEEKHGRSGALLFVTLRHDYRQDGQLALSEEHDIVYREPTPPKLGGTEALPE GDWREALEPDPVLLFRYSAVTFNGHRIHYDWPYVTDAEGYPGLVVHGPLIATLALRAF CRANPQARLRRFAYRGLRPLICPEPFEVGGRLLAAGKAEVWVGNGAGLAQRGDVEFD" misc_feature 960497..961318 /locus_tag="PA0878" /note="Hydroxyacyl-ACP dehydratase HTD2, hotdog domain [Lipid transport and metabolism]; Region: HTD2; COG3777" /db_xref="CDD:442991" gene 961370..962530 /locus_tag="PA0879" /db_xref="GeneID:879721" CDS 961370..962530 /locus_tag="PA0879" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_249570.1" /db_xref="GeneID:879721" /translation="MNPNSEELNAIREGVRALCAEFDAAYWRRIDEQRGFPEAFVKAL TDAGWLSAMIPEEYGGSGLGLAEASVILEEVNRCGGNSGTVHGQMYNMFTLLRNGSEA QKRFYLPKLASGELRLQSMGVTEPTTGTDTTKIKTTAVRKGDRYVINGQKVWISRIQH SDLMILLARTTPLAEVKRKSEGMSIFLVDLREAIGKGLTVQPIANMVNHETNELFFDN LEIPADSLIGEEGKGFRYILDGLNAERTLIAAECIGDGRWFIDKASHYARDRVVFGRP IGQNQGVQFPIAEAHIEVEAADLMRWRACQEYDAGLNAGASANMAKYLAAKASWEAAN ACLQTHGGFGFACEYDVERKFRETRLYQVAPISTNLILSYVAEHLLELPRSF" misc_feature 961382..962521 /locus_tag="PA0879" /note="Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]; Region: CaiA; COG1960" /db_xref="CDD:441563" gene 962545..962925 /locus_tag="PA0880" /db_xref="GeneID:879214" CDS 962545..962925 /locus_tag="PA0880" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ring-cleaving dioxygenase" /protein_id="NP_249571.1" /db_xref="GeneID:879214" /translation="MQIDRLDHLVLTVRDIDASIDFYTRVLGMRAVTFGAGRKALAFG AQKINLHQAGGEFEPKAERPTPGSADLCFIVATPLEAVAEQLRQQAVEILEGPVQRTG AGGPILSLYLRDPDLNLIELSNPL" misc_feature 962551..962919 /locus_tag="PA0880" /note="Human glyoxalase domain-containing protein 5 and similar proteins; Region: GLOD5; cd07253" /db_xref="CDD:319916" misc_feature order(962551..962574,962623..962628,962671..962685, 962737..962772,962785..962790,962797..962799, 962824..962826,962845..962856,962881..962883, 962890..962895,962899..962901,962905..962907, 962917..962919) /locus_tag="PA0880" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319916" gene 962964..964316 /locus_tag="PA0881" /db_xref="GeneID:877685" CDS 962964..964316 /locus_tag="PA0881" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249572.1" /db_xref="GeneID:877685" /translation="MTDYTQQLAGFLAGLRYQDLPPAVLARMEELFLDWLGSALAGKG QHPIPLFERYAERMGPADGSAQILPSRRRSSPYFAALVNGAASHVVEQDDLHNSSVLH PAAVVFPAALAAAQDLGRSGAELILAAVAGYEAGIRIGEFLGRSHYRVFHTTATVGTL AAAVAVGKLMDFDRERFVDLLGSAGTQAAGLWEFLRDAADSKQLHTAKAAADGLLAAY LTADGLSGARHILEGEQGMAAGMSSDADPERLVDRLGSRWALLETSFKFHASCRHTHP AADALLALMQREGLDHSQIAAVTARVHQGAIDVLGRVVEPQTVHQAKFSMGTVLGLIA VYGKAGLGEFHRHALSDPRVAAFRERVEMRLDPEVDAAYPQRWLGRVEVLDREGRRHT AAIDEPKGDPGNTLSRDELADKFRRLLAFSGAATDAEAEILIQRAWGLRQAPSVAPLI " misc_feature 962976..964313 /locus_tag="PA0881" /note="2-methylcitrate dehydratase PrpD [Carbohydrate transport and metabolism]; Region: PrpD; COG2079" /db_xref="CDD:441682" gene 964372..965574 /locus_tag="PA0882" /db_xref="GeneID:880849" CDS 964372..965574 /locus_tag="PA0882" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249573.1" /db_xref="GeneID:880849" /translation="MTQSHRPRPLDGITVVSLEHAIAAPFCTRQLADLGARVIKIERP GVGDFARGYDERVNGLSSHFVWTNRSKQSLSLDLKQAEALPLLEKLLAGADVLVQNLA PGAAARLGLSYEALRERFPRLIVCDISGYGEGGPYEKKKAYDLLIQSEGGFLSVTGGA GPNEMAKAGCSIADIAAGMYAYSSILSALLLRERTGEGSRIDVSMLESLVEWMGYPMY YAYQDAPPPPRAGASHSTIYPYGPFPAGDGGTVMLGLQNEREWRAFCDKVLRRPELAD DERFSANFKRSANREELRALIVEAFAALPAAEVVARLEQAQIASAHVNDMAGVWAHPQ LQARQRWTSIDSPAGRLPALLPPASSSAFVPRMDAVPALGGDSDALLAELGCTAADIQ RLRATGTV" misc_feature 964381..965571 /locus_tag="PA0882" /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]; Region: CaiB; COG1804" /db_xref="CDD:441409" gene 965585..966412 /locus_tag="PA0883" /db_xref="GeneID:878033" CDS 965585..966412 /locus_tag="PA0883" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA lyase subunit beta" /protein_id="NP_249574.1" /db_xref="GeneID:878033" /translation="MNRQIVRSALFVPATRPERIPKALASGADRVIVDLEDAVEEGLK VEARANLRRFLVDTPEARVLVRINAAEHPGHADDLALCRDHAGVIGLLLPKVESAAQV RHAAVASGKPVWPIVESARGLAALGEIAAAAGVERLSFGSLDLALDLDLNSGSNAAEQ ILGHARYALLLQTRLAGLAPPLDGVYPAIQNRAGLVEAVRFARDMGFGGLLCIHPSQV EPIHQTLMPSPAELEWARRVAEAGASGAGVFVVDGEMVDAPVLGRARRLLERAGEGG" misc_feature 965603..966409 /locus_tag="PA0883" /note="Citrate lyase beta subunit [Carbohydrate transport and metabolism]; Region: CitE; COG2301" /db_xref="CDD:441876" gene 966526..967521 /locus_tag="PA0884" /db_xref="GeneID:878364" CDS 966526..967521 /locus_tag="PA0884" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate-binding protein" /protein_id="NP_249575.1" /db_xref="GeneID:878364" /translation="MFKTMVRALLCALAIGGSCLANAAQPIVIKFSHVVAENTPKGQG ALLFKKLVEQRLGGRVEVDVYPNSSLFGDGKEMEALLLGDVQMLAPSLAKFEQYTRKV QIFDLPFLFDDIQAVDRFQRSPQGRALLTSMQGKGILGLAYWHNGMKQLSANRPLLEP EDARGLKFRVQASDVLNEQFRQLRAISRKMSFAEVYQGLQTGVVNGTENTWSNYESQK VNEVQKYFTESNHGLVDYMVITNAKFWNGLPADIREELQRIMDEVTVQVNLEAERLNR DARQRILASGASEIHTLSPQQRADWRQAMQPVWQKFRGNVGADLLQAAEASNRPD" misc_feature 966607..967500 /locus_tag="PA0884" /note="Uncharacterized substrate-binding protein of the Tripartite ATP-independent Periplasmic transporter family; the type 2 periplasmic-binding protein fold; Region: PBP2_TRAP_SBP_like_1; cd13674" /db_xref="CDD:270392" misc_feature order(967030..967032,967036..967038,967099..967101, 967150..967155,967162..967164,967225..967227) /locus_tag="PA0884" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270392" gene 967570..968208 /locus_tag="PA0885" /db_xref="GeneID:878538" CDS 967570..968208 /locus_tag="PA0885" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate transporter" /protein_id="NP_249576.1" /db_xref="GeneID:878538" /translation="MNRLVRVWNRFEEGAIAFLLAAMTLVTFLYVVMTNVFTLFYDLG DRLPTLRAPLYSMGDAILGVAQDMSWSNALTKALFGWLIFLGIAYGVRTAGHLGVDAL VRLAPRPLQRLIGILACLCCLGYAGLFMVASYDWVKTLFVAGIGAEDLDHFGILQAYI AVVVPVGFGLVLLRYLEILVNLLRGRQLGLGLADEAAEASKLAGEEAGENRP" misc_feature 967570..968154 /locus_tag="PA0885" /note="TRAP-type C4-dicarboxylate transport system, small permease component YiaM [Carbohydrate transport and metabolism]; Region: DctM; COG3090" /db_xref="CDD:442324" gene 968205..969488 /locus_tag="PA0886" /db_xref="GeneID:879689" CDS 968205..969488 /locus_tag="PA0886" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate transporter" /protein_id="NP_249577.1" /db_xref="GeneID:879689" /translation="MTVLILFLLLFLFMFIGVPIAISLGLSGALTILLFSPDSVRSLA IKLFETSEAYTLLAIPFFLLSGAFMTTGGVARRLIDFANACVGHIRGGLAIAAVLACM LFAALSGSSPATVAAVGSIAVAGMVRSGYPRAFGAGIICNAGTLGILIPPSIVMVVYA AATETSVGKLFVAGVVPGLLLGVILMVVIYIVARVKKLPAQPRASFREWLAAARRAGW GLLLLVIILGGIYSGLFTPTEAAAVAAVYSAFVALFVYKDMRLRDCPKVLLESGRLSI MLMFIIANAMLFAHVLTTEQIPQQITEWVVQEGLTPIGFLLMVNVVLLVAGSFMEPSA IVLILAPIFFPIAMKLGIDPIHLGIVMVVNMEIGLVHPPVGLNLFVTSAVTGMPLGAT IRAALPWLMILLLFLILVTYVPLISLWLPGLLGMS" misc_feature 968253..969482 /locus_tag="PA0886" /note="TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]; Region: DctQ; COG1593" /db_xref="CDD:441201" gene 969670..971625 /gene="acsA" /locus_tag="PA0887" /db_xref="GeneID:879732" CDS 969670..971625 /gene="acsA" /locus_tag="PA0887" /EC_number="6.2.1.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="acetyl-CoA synthetase" /protein_id="NP_249578.1" /db_xref="GeneID:879732" /translation="MSAASLYPVHPEAVARTFTDEATYKTMYQQSVVNPDGFWREQAQ RIDWIKPFEKVKQTSFDDHHVDIKWFADGTLNVSHNCLDRHLAERGDQVAIIWEGDDP ADHQEITYRQLHEQVCKFANALRGQDVHRGDVVTIYMPMIPEAVVAMLACTRIGAIHS VVFGGFSPEALAGRIIDCKSKVVITADEGVRGGKRTPLKANVDDALTNPETSSVQKII VCKRTGAEIKWNQHRDVWYDDLMKVAGSTCAPKEMGAEDPLFILYTSGSTGKPKGVLH TTGGYLVYASLTHERVFDYRPGEVYWCTADIGWVTGHTYIVYGPLANGATTILFEGVP NYPDVTRVAKIIDKHKVNILYTAPTAIRAMMAEGKAAVAGADGSSLRLLGSVGEPINP EAWQWYYETVGQSRCPIVDTWWQTETGACLMTPLPGAHAMKPGSAAKPFFGVVPALVD NLGNLIEGAAEGNLVILDSWPGQARTLFGDHDRFVDTYFKTFKGMYFTGDGARRDEDG YYWITGRVDDVLNVSGHRMGTAEVESAMVAHPKVAEAAVVGMQHDIKGQGIYVYVTLN SGVEPSEALRQELKQWVRREIGPIATPDVIQWAPGLPKTRSGKIMRRILRKIAAAEYD TLGDISTLADPGVVQHLIETHRSMQAA" misc_feature 969685..971616 /gene="acsA" /locus_tag="PA0887" /note="acetyl-CoA synthetase; Provisional; Region: PRK00174" /db_xref="CDD:234677" misc_feature order(970156..970164,970240..970242,970249..970251, 970255..970257,970582..970584,970597..970602, 970666..970674,970744..970749,970756..970758, 970825..970836,970900..970917,971167..971169, 971203..971205,971212..971214,971236..971247, 971419..971421,971434..971439) /gene="acsA" /locus_tag="PA0887" /note="active site" /db_xref="CDD:341270" misc_feature order(970156..970164,970240..970242,970249..970251, 970255..970257,970582..970584,970600..970602, 970666..970674,970744..970749,970756..970758, 971236..971244,971419..971421,971434..971436) /gene="acsA" /locus_tag="PA0887" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:341270" misc_feature order(970450..970452,970459..970476,970480..970485) /gene="acsA" /locus_tag="PA0887" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341270" misc_feature order(970597..970602,970825..970836,970900..970917, 971167..971169,971203..971205,971212..971214, 971245..971247) /gene="acsA" /locus_tag="PA0887" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341270" misc_feature order(970597..970602,970825..970830,970909..970911) /gene="acsA" /locus_tag="PA0887" /note="acetate binding site [chemical binding]; other site" /db_xref="CDD:341270" gene 971858..971972 /locus_tag="PA0887.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965631" ncRNA 971858..971972 /ncRNA_class="other" /locus_tag="PA0887.1" /product="P7" /db_xref="GeneID:6965631" protein_bind 971963..972005 /experiment="Beta-gal reporter assay [PMID: 9791103]" /experiment="EMSA [PMID: 9791103]" /note="'Transcription factor binding site for NP_249584.; Evidence of regulation for: PA0890, PA0891, PA0892, PA0893, PA0889, PA0888'" /bound_moiety="ArgR" gene 972166..972945 /gene="aotJ" /locus_tag="PA0888" /db_xref="GeneID:879210" CDS 972166..972945 /gene="aotJ" /locus_tag="PA0888" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="arginine/ornithine ABC transporter substrate-binding protein AotJ" /protein_id="NP_249579.1" /db_xref="GeneID:879210" /translation="MKKLALLGALALSVLSLPTFAADKPVRIGIEAAYPPFSLKTPDG QLAGFDVDIGNALCEEMKVQCKWVEQEFDGLIPALKVRKIDAILSSMTITDERKRSVD FTNKYYNTPARFVMKEGASLNDPKADLKGKKAGVLRGSTADRYASAELTPAGVEVVRY NSQQEANMDLVAGRLDAVVADSVNLEDGFLKTDAGKGYAFVGPQLTDAKYFGEGVGIA VRKGDSELAGKFNAAIDALRANGKYKQIQDKYFSFDVYGSN" misc_feature 972235..972918 /gene="aotJ" /locus_tag="PA0888" /note="Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold; Region: PBP2_HisJ_LAO; cd13703" /db_xref="CDD:270421" misc_feature order(972256..972258,972265..972267,972379..972381, 972430..972432,972436..972441,972454..972456, 972574..972576,972583..972591,972706..972708) /gene="aotJ" /locus_tag="PA0888" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:270421" gene 973064..973753 /gene="aotQ" /locus_tag="PA0889" /db_xref="GeneID:882205" CDS 973064..973753 /gene="aotQ" /locus_tag="PA0889" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="arginine/ornithine ABC transporter permease AotQ" /protein_id="NP_249580.1" /db_xref="GeneID:882205" /translation="MITGYGATIVDGAWLTLQLALLSMLLAIVLGLLGAAFRLSPVRW LAWCGDLYATVVRGIPDLVLILLIFYGGQGLLNWVAPQLGYDDYIDLNPFVSGVGTLG FIFGAYLSETFRGAFMAIPKGQGEAGYAYGMSHRQVFFRIQVPQMIRLAIPGFTNNWL VLVKATALISVVGLQDMMFKAKQASDATREPFTYYLAVAGLYLLVTSVSLLLLRLLER RYSVGVKTAEL" misc_feature 973064..973669 /gene="aotQ" /locus_tag="PA0889" /note="ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; Region: ArtQ; COG4215" /db_xref="CDD:443361" gene 973770..974468 /gene="aotM" /locus_tag="PA0890" /db_xref="GeneID:880652" CDS 973770..974468 /gene="aotM" /locus_tag="PA0890" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="arginine/ornithine ABC transporter permease AotM" /protein_id="NP_249581.1" /db_xref="GeneID:880652" /translation="MIFDFSVIWDSLPLYFDGLLVTLKLLSISLLIGLLLAVPLALMR VSKQPLVNFPAWLYTYVIRGTPMLVQLFLIYYGLAQFDAVRESALWPWLSNASFCACL AFAINTSAYTAEILAGSLKATPHGEIEAAKAMGMSRLKMYRRILLPSALRRALPQYSN EVIMMLQTTSLASIVTLVDITGAARTVYSQYYLPFEAFITAGLFYLCLTFILVRLFKL AERRWLAYLAPRKS" misc_feature 973776..974462 /gene="aotM" /locus_tag="PA0890" /note="ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism]; Region: ArtM; COG4160" /db_xref="CDD:443325" gene 974482..975594 /locus_tag="PA0891" /db_xref="GeneID:877572" CDS 974482..975594 /locus_tag="PA0891" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249582.1" /db_xref="GeneID:877572" /translation="MERIDHLLPWSTLGSEKRLSVFRFGCGARKVYIQSSLHADELPG MRTAWELKQRLRLLEAEGRLRGTVELVPVANPVGLGQMIQALHQGRFEMSSGRNFNRD FPDLLDAVIDSVGERLGSDPAANVALVRQALRAALDALPPATSELEGMQRLLYRHACD ADLVLDLHCDFEAAIHLYTLPQQWPAFASLAARLGAAVGLLAEESGGGSFDEACSVPW LRLSRLYPRAELPLACLATTVELGGQADTTVQQAEANAAAILAFLAEQGFVEGEWPAA PEACCEGLPFEGTEYVHAPHTGVVSFLRRPGEWVEAGEPLFQVIDPLADRASTVCAGV SGVLFAIERMRYAQPGLWLAKVAGRQPIRQGRLLSD" misc_feature 974497..975288 /locus_tag="PA0891" /note="Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA)-like subfamily; subgroup includes Pseudomonas aeruginosa AotO; Region: M14_PaAOTO_like; cd06250" /db_xref="CDD:349468" misc_feature order(974593..974595,974602..974604,974749..974751, 974779..974784,974983..974985,975004..975006, 975166..975168,975199..975201) /locus_tag="PA0891" /note="active site" /db_xref="CDD:349468" misc_feature 975355..>975447 /locus_tag="PA0891" /note="HlyD family secretion protein; Region: HlyD_3; pfam13437" /db_xref="CDD:433206" gene 975613..976377 /gene="aotP" /locus_tag="PA0892" /db_xref="GeneID:882247" CDS 975613..976377 /gene="aotP" /locus_tag="PA0892" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="arginine/ornithine ABC transporter ATP-binding protein AotP" /protein_id="NP_249583.1" /db_xref="GeneID:882247" /translation="MYKLEVQDLHKRYGSHEVLKGVSLAAKAGDVISIIGSSGSGKST FLRCINLLEQPHAGKILLNGEELKLVPGRDGALKAADSRQLQRMRSRLSMVFQHFNLW SHMSALENVIEAPVHVLGVSKKEAIEKAEHYLAKVGVAHRKDAYPAHMSGGEQQRVAI ARALAVEPEVMLFDEPTSALDPELVGEVLKVMQDLAQEGRTMVVVTHEMGFAREVSNQ LVFLHKGLVEEHGCPKEVLANPQSDRLKQFLSGSLK" misc_feature 975616..976374 /gene="aotP" /locus_tag="PA0892" /note="ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]; Region: HisP; COG4598" /db_xref="CDD:443652" gene 976410..977399 /gene="argR" /locus_tag="PA0893" /db_xref="GeneID:879434" CDS 976410..977399 /gene="argR" /locus_tag="PA0893" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator ArgR" /protein_id="NP_249584.1" /db_xref="GeneID:879434" /translation="MTAQPQRIGFLLWPATRALTLSLAEEALRAARRLHPEALYEPLF LLAEAPAEEEGWRLPGTAWNGRLEQCSRLFLVADEAPAAVSPALGLALKQLARSGAAI GALSAGIYPLAQLGLLDGYRAAVHWRWHDDFTERFPKVIATNHLFEWDRDRMTACGGM AVLDLLLALLSRDHGAELAGAVSEELVVERIREGNERQRIPLKNRLGSSHPKLTQAVL LMEANIEEPLTTDEIAQHVCVSRRQLERIFKQYLNRVPSQYYLELRLNRARQMLMQTS KSIIQIGLSCGFSSGPHFSSAYRNFFGVTPREDRNQRRGGSAFETTFTPVERG" misc_feature 976425..977363 /gene="argR" /locus_tag="PA0893" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene complement(977420..977743) /locus_tag="PA0894" /db_xref="GeneID:879273" CDS complement(977420..977743) /locus_tag="PA0894" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249585.1" /db_xref="GeneID:879273" /translation="MHSGAYFFYAAPRAGTAGKQAMPIEGIDYRLVFASDVNPRDGLG LECWRGEQPLFEVFRDDVGRRFVVNLFASDVPLELLEAIIPTARRELGDFPRRSASRG VAKPG" gene 977910..979130 /gene="aruC" /locus_tag="PA0895" /db_xref="GeneID:878207" CDS 977910..979130 /gene="aruC" /locus_tag="PA0895" /EC_number="2.6.1.11" /EC_number="2.6.1.17" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="acetylornithine aminotransferase" /protein_id="NP_249586.1" /db_xref="GeneID:878207" /translation="MSAPHAQVERADFDRYMVPNYAPAAFIPVRGEGSRVWDQSGREL IDFAGGIAVTSLGHAHPALVKALTEQAQRIWHVSNVFTNEPALRLARKLVDATFAERV FLANSGAEANEAAFKLARRYANDVYGPQKYEIIAASNSFHGRTLFTVNVGGQPKYSDG FGPKFEGITHVPYNDLEALKAAISDKTCAVVLEPIQGEGGVLPAQQAYLEGARKLCDE HNALLVFDEVQSGMGRVGELFAYMHYGVVPDILSSAKSLGGGFPIGAMLTTGEIAKHL SVGTHGTTYGGNPLASAVAEAALDVINTPEVLDGVKAKHERFKSRLQKIGQEYGIFDE IRGMGLLIGAALTDEWKGKARDVLNAAEKEAVMVLQASPDVVRFAPSLVIDDAEIDEG LERFERAVAKLVRG" misc_feature 977916..979124 /gene="aruC" /locus_tag="PA0895" /note="acetylornithine/succinyldiaminopimelate transaminase; Region: argD; PRK05093" /db_xref="CDD:179933" misc_feature order(978228..978236,978330..978335,978339..978341, 978486..978488,978585..978587,978591..978596, 978672..978674) /gene="aruC" /locus_tag="PA0895" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99735" misc_feature order(978231..978236,978330..978335,978486..978488, 978585..978587,978594..978596,978672..978674) /gene="aruC" /locus_tag="PA0895" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature 978672..978674 /gene="aruC" /locus_tag="PA0895" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 979329..980345 /gene="aruF" /locus_tag="PA0896" /db_xref="GeneID:879437" CDS 979329..980345 /gene="aruF" /locus_tag="PA0896" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="arginine N-succinyltransferase subunit alpha" /protein_id="NP_249587.1" /db_xref="GeneID:879437" /translation="MLVMRPAQAADLPQVQRLAADSPVGVTSLPDDAERLRDKILASE ASFAAEVSYNGEESYFFVLEDSASGELVGCSAIVASAGFSEPFYSFRNETFVHASRSL SIHNKIHVLSLCHDLTGNSLLTSFYVQRDLVQSVYAELNSRGRLLFMASHPERFADAV VVEIVGYSDEQGESPFWNAVGRNFFDLNYIEAEKLSGLKSRTFLAELMPHYPIYVPLL PDAAQESMGQVHPRAQITFDILMREGFETDNYIDIFDGGPTLHARTSGIRSIAQSRVV PVKIGEAPKSGRPYLVTNGQLQDFRAVVLDLDWAPGKPVALSVEAAEALGVGEGASVR LVAV" misc_feature 979335..980342 /gene="aruF" /locus_tag="PA0896" /note="Arginine N-succinyltransferase beta subunit; Region: AstA; cl11440" /db_xref="CDD:448257" gene 980357..981379 /gene="aruG" /locus_tag="PA0897" /db_xref="GeneID:883082" CDS 980357..981379 /gene="aruG" /locus_tag="PA0897" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="arginine N-succinyltransferase subunit beta" /protein_id="NP_249588.1" /db_xref="GeneID:883082" /translation="MIVRPVTSADLPALIELARSTGTGLTTLPANEQRLQHRVSWAEK AFRGEAERGDADYLFVLEDDAGKVVGISAIAGAVGLREPWYNYRVGLTVSASQELNIH REIPTLFLANDLTGNSELCSLFLHADHRSGLNGKLLSRARFLFIAEFRHLFGDKLIAE MRGMSDEEGRSPFWESLGRHFFKMEFSQADYLTGVGNKAFIAELMPKFPLYTCFLSEE ARGVIGRVHPNTEPALAMLKAEGFSYQGYVDIFDAGPAIEAETDKIRAIAESQNLVLA VGTPGDDAEPYLIHNRKREDCRITAAPARAAAGTLVVDPLTAKRLRLSAGASVRAVPL SAQKRG" misc_feature 980360..981358 /gene="aruG" /locus_tag="PA0897" /note="Arginine N-succinyltransferase beta subunit; Region: AstA; cl11440" /db_xref="CDD:448257" gene 981422..982888 /gene="aruD" /locus_tag="PA0898" /db_xref="GeneID:883040" CDS 981422..982888 /gene="aruD" /locus_tag="PA0898" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="N-succinylglutamate 5-semialdehyde dehydrogenase" /protein_id="NP_249589.1" /db_xref="GeneID:883040" /translation="MMSTHYIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAA VCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESATEVTS MVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPA LLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGL FFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAG QRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLK AQEHLIGKGAQPLLAMTQPIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFA AAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGAS GNHRPSAYYAADYCAYPVASLESPSVSLPATLTPGISL" misc_feature 981428..982885 /gene="aruD" /locus_tag="PA0898" /note="succinylglutamic semialdehyde dehydrogenase; Reviewed; Region: astD; PRK09457" /db_xref="CDD:181873" misc_feature order(981848..981862,981884..981886,981929..981931, 981935..981940,982079..982090,982097..982099, 982106..982111,982154..982162,982256..982258, 982550..982552,982556..982558,982634..982636, 982751..982753) /gene="aruD" /locus_tag="PA0898" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:143414" misc_feature order(981860..981862,982154..982156,982247..982249, 982256..982258) /gene="aruD" /locus_tag="PA0898" /note="catalytic residues [active]" /db_xref="CDD:143414" gene 982885..984231 /gene="aruB" /locus_tag="PA0899" /db_xref="GeneID:878588" CDS 982885..984231 /gene="aruB" /locus_tag="PA0899" /EC_number="3.5.3.23" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="N-succinylarginine dihydrolase" /protein_id="NP_249590.1" /db_xref="GeneID:878588" /translation="MNAHEVNFDGLVGPTHNYGGLSYGNVASQSNSQAVSNPKEAAKQ GLAKMKALMEMGFKQGVLAPQARPDTAALRSLGFSGSDEEVIRRAAKEAMPLLAACSS ASSMWTANAATVSPSADTADGRVHFTAANLNCKFHRSIEHPTTSRVLAAMFNDERHFA HHAALPAVSQFGDEGAANHTRFCKDYGDAGVEFFVFGRSAFDSRFPAPQRYPARQTLE ACQAVARLHGLSEAGVVYAQQNPAVIDQGVFHNDVISVGNGEVLFHHEDAFLDTEKVL AELHDKLGRRGGRFRAICVPRDQVAVEDAVKSYLFNSQLLSKADGSMLLVVPEECRNN PRVWNYLDQLTGDDGPIREVKVFDLKQSMQNGGGPACLRLRVALQERELAAVNPGVIM SAGLYDTLVAWVDRHYRDRLSETDLADPQLLLECRTALDELTQILKLGSVYSFQLD" misc_feature 982888..984222 /gene="aruB" /locus_tag="PA0899" /note="Succinylarginine dihydrolase [Amino acid transport and metabolism]; Region: AstB; COG3724" /db_xref="CDD:442938" gene 984245..984535 /locus_tag="PA0900" /db_xref="GeneID:879369" CDS 984245..984535 /locus_tag="PA0900" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249591.1" /db_xref="GeneID:879369" /translation="MSDSLQLILEDTDGTQLETSCTRFAVVWQGKEVWVQQAGNGQLL IGVDVEDGDTEYTNLLLRPMATNLVSLQLEMEPIEEGDDHEHGPDCGCDHTH" gene 984549..985547 /gene="aruE" /locus_tag="PA0901" /db_xref="GeneID:878165" CDS 984549..985547 /gene="aruE" /locus_tag="PA0901" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="succinylglutamate desuccinylase" /protein_id="NP_249592.1" /db_xref="GeneID:878165" /translation="MLALGKLLDLTLAGREPTEKIQLTADGTRLHWLAEGALEVTPIG ARDNGVDLLLSAGIHGNETAPIELLERLIRKVAAGTLKPAARVLFLFGNPEAIRRGER YVEQDMNRLFNGRHEEGSGNEAFRAAELERLAQVFFSKTERVHLHYDLHTAIRGSKIE QFALYPWAEGRQHSRSELARLRDAGIEAVLLQNKPGITFSAYTYGQLGAEAFTLELGK ARPFGENQEVNLERLERSLELLIDGSEEQPDGSRLDGLKLFSVSREVIKHSDHFRLHL DDDVANFTELSPGYLLAEDIGGTRWVVDEVGARIIFPNPRVKNGLRAGILVVPAKL" misc_feature 984549..985544 /gene="aruE" /locus_tag="PA0901" /note="succinylglutamate desuccinylase; Provisional; Region: PRK05324" /db_xref="CDD:235408" misc_feature order(984723..984725,984732..984734,984852..984854, 984873..984878,984999..985001,985038..985040, 985137..985139,985149..985151,985191..985193) /gene="aruE" /locus_tag="PA0901" /note="active site" /db_xref="CDD:349428" gene 985692..986696 /locus_tag="PA0902" /db_xref="GeneID:881903" CDS 985692..986696 /locus_tag="PA0902" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249593.1" /db_xref="GeneID:881903" /translation="MPVIDLRSDTVTQPTAGMREAMAAAELGDDVYGEDPTVNRLEAE LAARLGFAAALFVPTGTMSNLLGLMAHCERGDEYIVGQQAHTYKYEGGGAAVLGSIQP QPIDGEADGSLHLDKVAAAIKADDFHFARTRLLALENTMQGKVLPLDYLAAARAFTRA RGLALHLDGARLYNAAVKLGVDASEITRHFDSVSVCLSKGLGAPVGSVLCGSVELIGK ARRWRKMVGGGMRQAGLLAAAGLYALDHQVARLADDHANAARLGDGLRELGYAVEPVQ TNMVYVDVGERAVALRDFLAERGVRISAAARLRLVTHLDVSAESIGQVLDAFAAFRRS " misc_feature 985698..986681 /locus_tag="PA0902" /note="GntG family PLP-dependent aldolase; Region: GntG_guanitoxin; NF041359" /db_xref="CDD:469251" gene 986818..989442 /gene="alaS" /locus_tag="PA0903" /db_xref="GeneID:878299" CDS 986818..989442 /gene="alaS" /locus_tag="PA0903" /EC_number="6.1.1.7" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="alanine--tRNA ligase" /protein_id="NP_249594.1" /db_xref="GeneID:878299" /translation="MKSAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQ FKDCFLGLEKRAYTRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFK RDAIHYAWEFLTGEKWLNLPKEKLWVTVYATDDEAYDIWTKEVGVPAERMVRIGDNKG APYASDNFWAMGDTGPCGPCTEIFFDHGPEIWGGPPGSPEEDGDRYIEIWNNVFMQFN RTADGVMHPLPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASAEAIGCANDDA PSLKVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNKLGARGTFFHKIVA ALVAEMGDAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAELQGSVIPGNV VFKLYDTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERARASSAFGMDYNSLVKV DGETRFLGYQGVSGAGQIVALFRDGQAVERLEEGEEGVVVLDQTPFYAESGGQVGDSG YLEAAGVRFDVRDTTKAGGAHLHHGVVARGNLSVGGAVKAEVDASVRQATALNHSATH LLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKAEQLKALEDIVNAEIRRNTEV ETEETDIDTAKAKGAMALFGEKYGDQVRVLSMGGDFSVELCGGTHVSRTGDIGLFKIT SEGGVAAGVRRIEAVTGAAALAYLNGAEEQLKEAASLVKGSRDNLLDKLGALLERNRS LEKELEQLKAKAASAAGDDLSAAAVEIKGAKVLAARLDGLDGKALLALVDQLKNKLGR AVILLGGELDGKVVLVAGVTQDLTGQLKAGELMKQAAAAVGGKGGGRPDMAQGGGTDA AKLDEALALAQRFVEQGL" misc_feature 986818..989439 /gene="alaS" /locus_tag="PA0903" /note="Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: AlaS; COG0013" /db_xref="CDD:439784" gene 989590..990828 /gene="lysC" /locus_tag="PA0904" /db_xref="GeneID:878315" CDS 989590..990828 /gene="lysC" /locus_tag="PA0904" /EC_number="2.7.2.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aspartokinase" /protein_id="NP_249595.1" /db_xref="GeneID:878315" /translation="MALIVQKFGGTSVGTVERIEQVAEKVKKFREAGDDVVVVVSAMS GETNRLIGLANQIMEQPVPRELDVMVSTGEQVTIALLSMALIKRGVPAVSYTGNQVRI LTDSAHTKARILHIDDTHIRADLKAGRVVVVAGFQGVDGNGNITTLGRGGSDTTGVAL AAALKADECQIYTDVDGVYTTDPRVVPQARRLDKITFEEMLEMASLGSKVLQIRAVEF AGKYNVPLRVLHSFQEGPGTLITIDDEEESMEQPIISGIAFNRDEAKLTIRGVPDTPG VAFKILGPISAANVEVDMIVQNVAHDNTTDFTFTVHRNDYLNALEILKQTAANIGARE AIGDTNIAKVSIVGVGMRSHAGVASRMFEALAKESINIQMISTSEIKVSVVIEEKYLE LAVRALHTAFELDAPARQGE" misc_feature 989590..990804 /gene="lysC" /locus_tag="PA0904" /note="aspartate kinase; Reviewed; Region: PRK06635" /db_xref="CDD:235843" gene 991013..991198 /gene="rsmA" /locus_tag="PA0905" /db_xref="GeneID:878352" CDS 991013..991198 /gene="rsmA" /locus_tag="PA0905" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="carbon storage regulator" /protein_id="NP_249596.1" /db_xref="GeneID:878352" /translation="MLILTRRVGETLMVGDDVTVTVLGVKGNQVRIGVNAPKEVAVHR EEIYQRIQKEKDQEPNH" misc_feature 991013..991189 /gene="rsmA" /locus_tag="PA0905" /note="carbon storage regulator CsrA; Region: PRK01712" /db_xref="CDD:234973" gene 991260..991350 /locus_tag="PA0905.1" /db_xref="GeneID:3240244" tRNA 991260..991350 /locus_tag="PA0905.1" /product="tRNA-Ser" /db_xref="GeneID:3240244" gene 991468..991544 /locus_tag="PA0905.2" /db_xref="GeneID:3240245" tRNA 991468..991544 /locus_tag="PA0905.2" /product="tRNA-Arg" /db_xref="GeneID:3240245" gene 991656..991732 /locus_tag="PA0905.3" /db_xref="GeneID:3240276" tRNA 991656..991732 /locus_tag="PA0905.3" /product="tRNA-Arg" /db_xref="GeneID:3240276" gene complement(991830..992543) /locus_tag="PA0906" /db_xref="GeneID:878520" CDS complement(991830..992543) /locus_tag="PA0906" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249597.1" /db_xref="GeneID:878520" /translation="MELKDRIKAARKHAHLSQVQLAQAVGMTQTSISDLERGKSRATS FVAQIAGACGVNPLWLAEGRGEMLAERGQANAGPNASWLGAVESWDDETPLDADEIEL PFYKEIELSGGKGSTVILQTGGRKLRFGKYTLRKKNIDPASAACVTVSGNSMEPVLPD GSTVGVDTSARTIKDGDMYAFDHDGQLRVKLLYRLPGGGLRIRSFNSDEHPDERYEPQ EAAEHINVIGRVFWYSVLV" misc_feature complement(992331..992543) /locus_tag="PA0906" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" misc_feature complement(991848..992240) /locus_tag="PA0906" /note="Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains [Mobilome: prophages, transposons]; Region: COG2932" /db_xref="CDD:442176" gene 992714..993244 /locus_tag="PA0907" /db_xref="GeneID:878349" CDS 992714..993244 /locus_tag="PA0907" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249598.1" /db_xref="GeneID:878349" /translation="MFQSTEQALAVAYWMFEHQPGPKSSTAMVIDGLRERFDRSFIEH LPSGLSPHEWQAQAVMTVRFAQRQLAAHPLELAVVRAEFARGRDFVLGLAALRDWLKP GADPIEQRATLALLMRMFRRPPSSIREIERLSGLSKSTLHRWDKEWRERVVALLRQAL QRLEEPMAEVGIVGER" gene 993409..993783 /locus_tag="PA0908" /db_xref="GeneID:878331" CDS 993409..993783 /locus_tag="PA0908" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249599.1" /db_xref="GeneID:878331" /translation="MSEPSSAASAASAMAGVGLAMYLPGIDGNALLGGFGGAIFFVVF ARDYNALTRLGYLLVSWVGGYYAGIEALGRGLTQTSGMAAFVAATLCVTGGIGMLEWM RGGELPSWMRGLLRRRGGKSDG" misc_feature 993409..993768 /locus_tag="PA0908" /note="Putative phage holin; Region: Phage_holin_8; pfam16931" /db_xref="CDD:435663" gene 993776..994051 /locus_tag="PA0909" /db_xref="GeneID:882062" CDS 993776..994051 /locus_tag="PA0909" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249600.1" /db_xref="GeneID:882062" /translation="MVDPLSTLTVLVCSAICMRLITYRRAGARFRPGVSLCAYLLALC TGCQALGIVAGLYRAEHLSPWMLGVLLVLLVLLLQARGNLARVLRLH" misc_feature 993797..994042 /locus_tag="PA0909" /note="Putative 3TM holin, Phage_holin_3; Region: Phage_holin_3_7; pfam05449" /db_xref="CDD:428477" gene 994143..994646 /locus_tag="PA0910" /db_xref="GeneID:877763" CDS 994143..994646 /locus_tag="PA0910" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249601.1" /db_xref="GeneID:877763" /translation="MSSATVRLDHAALRETLRQLFGLPAGSVIDADQLLAPPAIPFMT LRLESLSLLGKVRREFSASGEQESLLASCESIFRLTWHGPEAHQYLQDARCLLQSGNA GERLRVLKASLLRLTPIENLSVVQDGQALGQARFDLVLAHEHVLLVDLERTAPGQASG GAGGTAS" gene 994699..995151 /locus_tag="PA0911" /db_xref="GeneID:878434" CDS 994699..995151 /locus_tag="PA0911" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249602.1" /db_xref="GeneID:878434" /translation="MVMLISRRVGIVRLDAVISENLAQAAVSARGDQLITIVGSIVDH APAGEPLPSLLPMEGGSRALNECRVRKGIAALTSLQGASETVDVQTGFHLYRGLFITR VVARRTAERGLSLTITASQRRARRAGGRLLKTVVRLFHAGRATPCPAR" gene complement(995172..995711) /locus_tag="PA0912" /db_xref="GeneID:879513" CDS complement(995172..995711) /locus_tag="PA0912" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249603.1" /db_xref="GeneID:879513" /translation="MRSLSLLLLLSLASTCEAAAVFRCEDASGHVSFTQLGCPAGQAG ETVVADNPPPGGRSVTPMAETKTKKASIGRKSVPLAVIGEREDRCGRRLDEKERRKAI VEQRIMAGMTRSDVERALGKPDRVSGNNAEVRYQYKADKRRGARSVSFDQEGCVKGRE GTGWSESIPGAKAGPSSYR" misc_feature complement(995550..995675) /locus_tag="PA0912" /note="Domain of unknown function (DUF4124); Region: DUF4124; pfam13511" /db_xref="CDD:433269" misc_feature complement(995223..>995384) /locus_tag="PA0912" /note="SmpA / OmlA family; Region: SmpA_OmlA; cl46449" /db_xref="CDD:480789" gene 996038..997486 /gene="mgtE" /locus_tag="PA0913" /db_xref="GeneID:878306" CDS 996038..997486 /gene="mgtE" /locus_tag="PA0913" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="Mg transporter MgtE" /protein_id="NP_249604.1" /db_xref="GeneID:878306" /translation="MTEVEAKKPQESLQDRLAQVVELLHRHKVVEDLTHRQEGQHHDR VENLVHRQNLVELQRKLEELHPADIAHILESLPLDDRLTVWQLVKSEDDGDILLEVSD AVRETLIADMDDHEIIAATKDLDADELADLAPELPRDVVHELMESLDAQQRERVRSAL SYEEDQVGALMDFEMVTIREDVSLEVVLRYLRRLKELPGHTDKLFVVDYDGVLKGVLP IKRLLVNDPDKQVLEVMATDPVTFHPDEDGYDAAQAFERYDLISAPVVDKGGKLIGRL TIDEMVDLIREESESEVLNMAGLREEEDIFASVWKSVRNRWAWLATNLITAFVASRVI GLFEGSIEKLVALAALMPIVAGIGGNSGNQTITMIVRAIALDQVQPTSNSRNRLLRKE LGVALVNGLAWGGVIGVVAFYLYGNWELGVVMTAAMTLNLLLAAMMGVLIPMTLHRFG RDPAMGSSVMITAMTDSGGFFIFLGLATIFLM" misc_feature 996146..997480 /gene="mgtE" /locus_tag="PA0913" /note="Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]; Region: MgtE; COG2239" /db_xref="CDD:441840" gene complement(997536..997928) /locus_tag="PA0914" /db_xref="GeneID:880653" CDS complement(997536..997928) /locus_tag="PA0914" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249605.1" /db_xref="GeneID:880653" /translation="MAERAEPLLAVLLQAPPCVDPWFLECRQDRAGLTILVRDLANQR TWRVEFVEVEGLRQLDAADLLEFWPACAASEGWLYRVEQGGWLDQECRREGFVARETK AVDEYFVNGGDRCLSVLSWSPPKVSPLI" gene complement(997921..998382) /locus_tag="PA0915" /db_xref="GeneID:880613" CDS complement(997921..998382) /locus_tag="PA0915" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249606.1" /db_xref="GeneID:880613" /translation="MLNNDVLRSLRYLLDLPDAHLAELAARFGEQVEADLLEAYLKKE DEDGFQACPDRYLARCLDGLIIQRRGRDESRPLPPLELPLSNNMILKKLRVAFELKEE DLHAILDSVDFPVSKPELSALFRKPGHSNYRTCGDQLLRNFLKGLTLRVRG" misc_feature complement(997924..998382) /locus_tag="PA0915" /note="Uncharacterized conserved protein YehS, DUF1456 family [Function unknown]; Region: YehS; COG4807" /db_xref="CDD:443835" gene complement(998444..999766) /locus_tag="PA0916" /db_xref="GeneID:880629" CDS complement(998444..999766) /locus_tag="PA0916" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="ribosomal protein S12 methylthiotransferase RimO" /protein_id="NP_249607.1" /db_xref="GeneID:880629" /translation="MSTPTPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDAD VVVVNTCGFIDSAKAESLEVIGEAIAENGKVIVTGCMGVEEHAIRDVHPSVLAVTGPQ QYEQVVTAVHEVVPPKTEHNPLVDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPS MRGKLVSRPVGDVLSEAERLVKAGVKELLVISQDTSAYGVDLKYKTDFWNGQPVKTRM KELCEALSSMGVWVRLHYVYPYPNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKAMKR PAFEDKTLARIKQWREICPELTIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQ YSPVEGAPANELGLEPVPDEVKQDRWERFMAHQQAISAARLQLKVGKEIEVLIDEVDE QGAVGRSWADAPEIDGNVFVDSDELKPGDKVRVRITDADEYDLWAELV" misc_feature complement(998459..999748) /locus_tag="PA0916" /note="ribosomal protein S12 methylthiotransferase RimO; Region: TIGR01125" /db_xref="CDD:273453" gene 1000013..1001917 /gene="kup" /locus_tag="PA0917" /db_xref="GeneID:880673" CDS 1000013..1001917 /gene="kup" /locus_tag="PA0917" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="potassium transport system protein kup" /protein_id="NP_249608.1" /db_xref="GeneID:880673" /translation="MSDAATRAEETSEGHSSSAIGLMVGAVGVCYGDIGTSPLYTLKE VFIGGYGVQANHDGVLGVLSLIFWSLVWVVSIKYVIFVLRADNQGEGGVMALSALARR AAAPFGRLQTFVVVAGLIGAALFYGDSMITPAISVLSAVEGLEIAFDGLEHWTVPLAL IVLIGLFLIQKHGTARIGILFGPVMVLWFGALAALGVYGVIQQPEVLQAMNPVWAVRF FSSHPGIGVAILGATVLALTGAEALYADMGHFGRKPIARAWFLLVLPALVLNYFGQGA TILSNAEAARNPFYLLAPGWALLPMVALSTLATVIASQAVISGAFSLTRQAIQLGYVP RMTIQHTSSHEQGQIYIGGVNWALMVGVVLLVLGFESSASLAAAYGVAVTGTMLITTL LMGVVIWRLWKWPLWLGVPFFCVMLAVDSLFFAANLPKVIQGGAFPVIAGIVIFILMS TWKRGRQLLVERLDEGSLPLSVFISSMRVQPPHRVQGTAVFLTARTDAVPHALLHNLL HNQVLHEQVVLLTVVNEDSPRVSPDRRFEVEAYGDGFFRVILHFGFMEEPDIPAALRL CHLNELDFSPMRTTYFLSRETVIPSKRIGMARWREGLFAFLLKNANGNLRYFNLPLNR VIELGTQVEI" misc_feature 1000028..1001914 /gene="kup" /locus_tag="PA0917" /note="K+ uptake protein Kup [Inorganic ion transport and metabolism]; Region: Kup; COG3158" /db_xref="CDD:442392" gene complement(1001972..1002520) /locus_tag="PA0918" /db_xref="GeneID:878803" CDS complement(1001972..1002520) /locus_tag="PA0918" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome b561" /protein_id="NP_249609.1" /db_xref="GeneID:878803" /translation="MSWKNTESRYGSLTIALHWLTLLLIAGVYACIELKGNFPKGSET RELLKQWHFMLGLSVFLLVWLRLLVRLATPTPRIEPAIPAWQATLARLMHYALYLMMI GLPFAGWLILSAAGKPIPFFGLELPPLVDKNPDLAGQIKEWHETIGNAGYFLIGLHAA AALFHHFVSRDNTLVRMLPQRR" misc_feature complement(1001975..1002520) /locus_tag="PA0918" /note="Cytochrome b561 [Energy production and conversion]; Region: CybB; COG3038" /db_xref="CDD:442272" gene complement(1002681..1003964) /locus_tag="PA0919" /db_xref="GeneID:877608" CDS complement(1002681..1003964) /locus_tag="PA0919" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249610.1" /db_xref="GeneID:877608" /translation="MSVVKRHWRRFLVAALVLIVGAALLLWSRPAAQAKLEALDLDDG GHATLAEPGEKPRSRVVVIAAPEQQLNDAQMLNLAHDSAARVIQYFPPENGDCRAQQS RLEAVIARLGGKPNLVAGIGPGSTTAWRWLASQDDDKAKALSVGFDIALAERDCDAPL PHQASHGQWLLAWNDNPDDDTAVFVRKQSSAETSISDYDTPLSDVLAHQLRLQLQGNA EALPVLEVPAAQPSDIVTLFYSGDGGWRDLDKDSAEHMASMGYPVVGIDTLRYYWQHK SPEQSAADLSKLMQHYREKWGAKRFVLAGYSFGADILPAIYNRLPGKDQQQVKAMLLL ALARTGSFEIEVEGWLGKAGEEAATGPEMARLPAAKVFCIYGAEEKDESGCTQSQAVG EKLELPGGHHFDEDYLSLAKKMLQAIRDRENAPDA" misc_feature complement(1002711..1003316) /locus_tag="PA0919" /note="Type IV secretory pathway, VirJ component [Intracellular trafficking, secretion, and vesicular transport]; Region: VirJ; COG3946" /db_xref="CDD:443146" gene complement(1003966..1006611) /locus_tag="PA0920" /db_xref="GeneID:880933" CDS complement(1003966..1006611) /locus_tag="PA0920" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249611.1" /db_xref="GeneID:880933" /translation="MRTDAPVPEHPAPPSSPASPQRIRLIDRITAYRQPIGLVFTLLL FGLALVACYHLLREIDPGALHDAIADVPRPALLGALSATALGFVILLGYEWSASRFAG VTLPMRSLATGGFSAFAIGNAVGLSLLSGGSVRYRLYSRHGIGAAEIARMTLFASLSL GCALPVLAALAALCDLDDAASALHLPRALVAVIAIAVLSLAVGLVAFLARHRLPGERP SPDSLLVRLGRRSLRLPGLRLSLLQLLITALDVAAAATVLYLLLPETPPFAAFLLVYL LALAAGVLSHVPGGVGVFEAVLLAAFAGQLGAAPLAAALLLYRLIYVVLPLLLACLLL LFLEARRLWVTRQAIRVASGFAAPILAILVFLSGVVLLFSGATPAIDTRLEHLGFLIP HRLIDASHLVASLIGVLCLLLAQGLRRRLSAAWALTLVLLLVGALLSLLKGFDWEEAS LLSLTAALLAMFRRSFYRPSRLMEVPFSPLYVGASICVVGASVWLLLFANQDVHYSNQ LWWQFALDADAPRALRAALGSCLLLLALALGWLLRAAPPAIREPNAEELQRAARIIRH SDQPDGGLALTGDKALLFHESDDAFLMYARRGRSMIALYDPIGPAMQRAELIWQFRDL CDLHHARPVFYQVRAENLPFYMDIGLTALKLGEEARVDLLRFDLENKGKEMKDLRYTW NRGQRDGLALEFHEPGQAPLDELKAISDAWLGGKQVREKGFSLGRFTPAYLNFFRIAI VRHQGKPVAFANLLETDSRELASLDLMRVHPDAPKLTMEFLMLGLILHYKAQGHARFS LGMVPLAGLQPRRGAPLTQRLGALVFRRGEQFYNFQGLRRFKDKFQPDWEPRYLAVPA GLDPLVALADTAALIAGGLTGLVKR" misc_feature complement(1003993..1006515) /locus_tag="PA0920" /note="bifunctional lysylphosphatidylglycerol flippase/synthetase MprF; Region: bifunc_MprF; NF033480" /db_xref="CDD:468043" gene 1006860..1007219 /locus_tag="PA0921" /db_xref="GeneID:879685" CDS 1006860..1007219 /locus_tag="PA0921" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249612.1" /db_xref="GeneID:879685" /translation="MIQAGIHVGAGVVLGVAAGWWLGDWEQSLQVKDSVARVDCLLYG ALLVVLLRHDGWLRRLGLLGLGLFCGSLLVYSVNPASLFAAKESWSLARISMRAFGPL VMLVVGMACARLAHELR" gene complement(1007234..1007548) /locus_tag="PA0922" /db_xref="GeneID:881525" CDS complement(1007234..1007548) /locus_tag="PA0922" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249613.1" /db_xref="GeneID:881525" /translation="MLNVEQLKRSVNRMELDDIRQAVDELQMDGLVTDGKTPFTRVHF NTCFAEIEALFQRAGFHRPLDVVGYQGEIYALYDPSRWEAVEVLRWLKEYREESRHLT PA" protein_bind 1007601..1007616 /experiment="EMSA [PMID: 17041045]" /experiment="qRT-PCR [RNA] [PMID: 17041045]" /experiment="Western blot (quantitative) expression analysis [PMID: 17041045]" /note="Transcription factor binding site for NP_251697." /bound_moiety="LexA" gene complement(1007727..1007803) /locus_tag="PA0922.1" /db_xref="GeneID:3240209" tRNA complement(1007727..1007803) /locus_tag="PA0922.1" /product="tRNA-Met" /db_xref="GeneID:3240209" gene 1007950..1008999 /gene="dinB" /locus_tag="PA0923" /db_xref="GeneID:881987" CDS 1007950..1008999 /gene="dinB" /locus_tag="PA0923" /EC_number="2.7.7.7" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="DNA polymerase IV" /protein_id="NP_249614.1" /db_xref="GeneID:881987" /translation="MRKIIHIDCDCFYAALEMRDDPSLRGKALAVGGSPDKRGVVATC SYEARAYGVRSAMAMRTALKLCPDLLVVRPRFDVYRAVSKQIHAIFRDYTDLIEPLSL DEAYLDVSASPHFAGSATRIAQDIRRRVAEELHITVSAGVAPNKFLAKIASDWRKPDG LFVITPEQVDGFVAELPVAKLHGVGKVTAERLARMGIRTCADLRQGSKLSLVREFGSF GERLWGLAHGIDERPVEVDSRRQSVSVECTFDRDLPDLAACLEELPTLLEELDGRLQR LDGSYRPDKPFVKLKFHDFTQTTVEQSGAGRDLESYRQLLGQAFARGNRPVRLIGVGV RLLDLQGAHEQLRLF" misc_feature 1007974..1008996 /gene="dinB" /locus_tag="PA0923" /note="DNA polymerase IV; Validated; Region: PRK02406" /db_xref="CDD:235035" gene complement(1009006..1010934) /locus_tag="PA0924" /db_xref="GeneID:881719" CDS complement(1009006..1010934) /locus_tag="PA0924" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249615.1" /db_xref="GeneID:881719" /translation="MFAPPSTETLNRFFLLSWLVVLWQVLRLQDGIVFDDAWLPLWSV AASLSYAFLYIVPVYLACRLLLHFHDRLPVRLSPWLAGVLAIVGSAAVQILLYADRTL YDLYGFHLNGFSIGLLVSPGGLSSLGSGDGTLLSASLAALALLCLQVLLYSACQVSRE RLPALPRRAWRYLLAAFLCLALGERLVYAFSSLRDYRPILLASERYPLYLPLTVRSLA RSLGIQPTPTQRELLQQQSDLHYPLRPLEISAPAHPLNIVWIVAESLRGDMLDPRYMP RLWDFSNRAIRLDNHYSSGNLTQMGVFGMFYGLHGGYWDAVLKAGQPPVLMEVLRQQN YQFRINAAQRFSYPPFDRSVFVNLRPQDLHVLDSPEPAWQRDARNTDDLLRFVDRRLP DRPFFACLFLESSHANYSFRDETAKIRPYLVNFNYLTTDFQAQMPLIKNRYLNAVREV DTQIGRLLQHLENQHLLENTAVVVLGDHGEEFMERSRWGHNTEFNRYQTGTVAVLSIP GQAPRAVRGITSHIDLPATLLPLLGVRNPPRDYSLGQDLLAADYHRDYAVSADTTRIA YLGEGFKVSFPLRGADRHHGPVSDGDDRPLDVEQQEAIRGPLRAARLELLQDLGRFSA LPVGEEPSPRNLATSLTP" misc_feature complement(1009063..1010907) /locus_tag="PA0924" /note="Periplasmic protein PbgA/YejM, regulator of the LPS biosynthesis, AlkP superfamily [Cell wall/membrane/envelope biogenesis, Signal transduction mechanisms]; Region: YejM; COG3083" /db_xref="CDD:442317" gene complement(1011047..1011454) /locus_tag="PA0925" /db_xref="GeneID:882106" CDS complement(1011047..1011454) /locus_tag="PA0925" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249616.1" /db_xref="GeneID:882106" /translation="MKPSLALFASAALILGGCASQETTLETEQAYQVDWVGAQPTMDY SHISLTFDGQGRAFGNGGCNHWFASYTLQDDLLQFGAIGSTRRLCAAEIMEQERRFLA LLQSVQHWDISPSDELRLWPAEGKPLRLVPEHD" misc_feature complement(1011071..1011400) /locus_tag="PA0925" /note="Heat shock protein HslJ [Posttranslational modification, protein turnover, chaperones]; Region: HslJ; COG3187" /db_xref="CDD:442420" gene complement(1011522..1011947) /locus_tag="PA0926" /db_xref="GeneID:880920" CDS complement(1011522..1011947) /locus_tag="PA0926" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249617.1" /db_xref="GeneID:880920" /translation="MAEHDFRYTLLNPQYTLNECRALSPGRYQVTGTGGSIKADDVLL VSLKGSKTLSMRLTVEKVRHLINPPGQWLAVARGPAFRELAIHTWQVDCDQCQARLDF EFAVDASLGRKALAPAAEERIHELGWRSREGKHLCPKCQ" gene complement(1011983..1012972) /gene="ldhA" /locus_tag="PA0927" /db_xref="GeneID:881895" CDS complement(1011983..1012972) /gene="ldhA" /locus_tag="PA0927" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="D-lactate dehydrogenase" /protein_id="NP_249618.1" /db_xref="GeneID:881895" /translation="MRILFFSSQAYDSESFQASNHRHGFELHFQQAHLQADTAVLAQG FEVVCAFVNDDLSRPVLERLAAGGTRLVALRSAGYNHVDLAAAEALGLPVVHVPAYSP HAVAEHAVGLILTLNRRLHRAYNRTREGDFSLHGLTGFDLHGKRVGVIGTGQIGETFA RIMAGFGCELLAYDPYPNPRIQALGGRYLALDALLAESDIVSLHCPLTADTRHLIDAQ RLATMKPGAMLINTGRGALVNAAALIEALKSGQLGYLGLDVYEEEADIFFEDRSDQPL QDDVLARLLSFPNVVVTAHQAFLTREALAAIADTTLDNIAAWQDGTPRNRVRA" misc_feature complement(1012004..1012972) /gene="ldhA" /locus_tag="PA0927" /note="D-Lactate and related Dehydrogenases, NAD-binding and catalytic domains; Region: LDH_like_2; cd12183" /db_xref="CDD:240659" misc_feature complement(order(1012079..1012081,1012088..1012090, 1012271..1012273,1012673..1012675,1012739..1012747)) /gene="ldhA" /locus_tag="PA0927" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:240659" misc_feature complement(order(1012079..1012084,1012088..1012090, 1012196..1012201,1012271..1012279,1012331..1012333, 1012340..1012342,1012352..1012363,1012448..1012456, 1012505..1012516,1012520..1012522,1012658..1012660, 1012673..1012675)) /gene="ldhA" /locus_tag="PA0927" /note="putative NAD binding site [chemical binding]; other site" /db_xref="CDD:240659" gene complement(1012975..1015752) /gene="gacS" /locus_tag="PA0928" /db_xref="GeneID:880882" CDS complement(1012975..1015752) /gene="gacS" /locus_tag="PA0928" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="sensor/response regulator hybrid protein" /protein_id="NP_249619.1" /db_xref="GeneID:880882" /translation="MFKDLGIKGRVLLLTLLPTSLLAMVLGGYFTWVQLSDMRAQLIE RGQLIAEQLAPLAATALARKDTAVLNRIANEALDQPDVRAVTFLDARQERLAHAGPSM LTVAPAGDASHLSMSTELDTTHFLLPVLGRHHSLSGATEPDDERVLGWVELELSHHGT LLRGYRSLFTSLLLIAAGLGVTALLALRMSRAINAPLELISQGVAQLKEGRMETRLPP MGSNELDELASGINRMAETLQSAQEEMQHNIDQATEDVRQNLETIEIQNIELDLARKE ALEASRIKSEFLANMSHEIRTPLNGILGFTNLLQKSELSPRQQDYLTTIQKSAESLLG IINEILDFSKIEAGKLVLENLPFNLRDLIQDALTMLAPAAHEKQLELVSLVYRDTPIQ LQGDPQRLKQILTNLVGNAIKFTQGGTVAVRAMLEDESDDRAQLRISVQDTGIGLSEE DQQALFKAFSQADNSLSRQAGGTGLGLVISKRLIEQMGGEIGVDSTPGEGAEFWISLS LPKSRDDNEEPGASWAAGQRVALLEPQELTRRSLHHQLTDFGLEVSEFADLDSLQESL RNPPPGQLPISLAVLGVSAAIHPPEELSQSFWEFERLGCKTLVLCPTTEQAQYHATLP DEQVEAKPACTRKLQRKLQELLQVRPTRSDKPHAMVSGRPPRLLCVDDNPANLLLVQT LLSDLGAQVTAVDSGYAALEVVQRERFDLVFMDVQMPGMDGRQATEAIRRWEAEREVS PVPVIALTAHALSNEKRALLQAGMDDYLTKPIDEQQLAQVVLKWTGLSLGQSLASMSR APQLGQLSVLDPEEGLRLAAGKADLAADMLAMLLASLAADRQAIRQARDNDDRTALLE RVHRLHGATRYCGVPQLRAACQTSETLLKQNDPAAAAALDELDKAIEALADTASATTH LSSTSLDSSEL" misc_feature complement(1013053..1015677) /gene="gacS" /locus_tag="PA0928" /note="hybrid sensory histidine kinase BarA; Provisional; Region: PRK11107" /db_xref="CDD:236848" protein_bind 1015908..1015926 /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA0929" /bound_moiety="Fur" gene 1015938..1016657 /locus_tag="PA0929" /db_xref="GeneID:881363" CDS 1015938..1016657 /locus_tag="PA0929" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_249620.1" /db_xref="GeneID:881363" /translation="MFPSLTPDPRLLAIEDDPTLGAHLFQHLNGSGFEVTWCRDGEEG LAAARSGGYDLILMDIMLPGRDGLEILRQLRQEQALPVILMSALGAEQDRIAGFSQGA DDYLPKPFSLAELRVRIDAILRRIALERGGAPGRCAEPLARPSLQFSADVCDVSLGER FAGLTPTEYRLLETFLAAEGETLTKAFLYQHVLHRGHTQHDRSLDMHVSHLRRKLQRL GYAGHQLHTVWGKGYVLTPAP" misc_feature 1015962..1016582 /locus_tag="PA0929" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" gene 1016657..1017994 /locus_tag="PA0930" /db_xref="GeneID:878621" CDS 1016657..1017994 /locus_tag="PA0930" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_249621.1" /db_xref="GeneID:878621" /translation="MPNRHSLFWRLALVLVAFFLLSVWLSWTWGRSAELKGYYLSAEA RSALADYARRAERAWLDDGREGIDRWLAEPRQRALDWVVVLDGRLQSLGSRPLTTEEA ERLTFLRGVDWPMSSRSLSRPFISLRFPEHPEQGRVVLRLPAEFVPPGLSPAKRLVTH GLVPAGLALLLGVLLYRRWIVPLGRLRAQANALRGNDLTARTQAEISRRSDELGDLGR AFDHMAERLDEHMVLQRQLLRDLSHELRTPLARLQVAAEGTLSAQLLRERLEQEVQGM QQLVDNTLELAWMDTERPVLALEDISIPALWDLLVENARFESGWAAERFRSALPEDCV VRGNLNALAQALENLLRNAIRHSPEGGVIRLHGRREGSCWWLCLEDQGEGVAEHQLET IFRPFTRLSSARTGKGFGLGLSIARRAVVLQGGRLWAEAADPGLRLCLVLPSA" misc_feature 1016771..1017100 /locus_tag="PA0930" /note="Sensor domain of 2-component histidine kinase; Region: HK_sensor; pfam16750" /db_xref="CDD:435558" misc_feature 1017200..1017337 /locus_tag="PA0930" /note="Histidine kinase, Adenylyl cyclase, Methyl-accepting protein, and Phosphatase (HAMP) domain; Region: HAMP; cd06225" /db_xref="CDD:381743" misc_feature 1017311..1017991 /locus_tag="PA0930" /note="K+-sensing histidine kinase KdpD [Signal transduction mechanisms]; Region: KdpD; COG2205" /db_xref="CDD:441807" gene 1018230..1020458 /gene="pirA" /locus_tag="PA0931" /db_xref="GeneID:881093" CDS 1018230..1020458 /gene="pirA" /locus_tag="PA0931" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="outer membrane receptor FepA" /protein_id="NP_249622.1" /db_xref="GeneID:881093" /translation="MYPQFRRGHLAAAVLFASSSLLGGQALAEDERLEELDERAESVV QLGDEVVLGTAEQELKQAPGVSIITAEDIRKRPPVNDLSEIIRTMPGVNLTGNSSSGQ RGNNRQIDIRGMGPENTLILVDGKPVSSRNSVRYGWRGERDTRGDSNWVPPEEVERIE VLRGPAAARYGSGAAGGVVNIITKRPTDRLRGSMTVFTNIPESSKDGATRRANFSLSG PLTEALSFRAYGSANKTDSDDTDINLGHTVNPSRTVAGREGVRNRDLSGMLSWQVTPD QVVDFEAGFSRQGNIYAGDTQNNNGTANTQGLADDGAETNRMYRENYAITHNGTWSFG TSRFVAQYDSTRNNRLEEGLAGSVEGQIGADRSFSASKLENYRLSGELNLPLHALFEQ VLTVGAEWNKETLNDPSSLKQGFVGSDSLPGTPAAGSRSPKSKAEIRALYVEDNIELR PGTMLTPGLRLDDHSDFGLNWSPSLNASQTLGEYFTVKAGIARAFKAPNLYQSNPNYL LYTRGNGCPIQTSSGGCYLVGNENLDAETSVNKELGIEFRRDGWVAGLTYFRNDYKNK IVAPLDVMGQTGTGNNILQWSNAKKAVVEGLEGNLLVPLHEDLSWSTNLTYMLQSKDK DTGNPLSVIPEYTLNSTLDWQASERLSTQLTSTIYGRQEPPKHGTSRNTPVVSRKEVG TYGIWGVSAGYTFSENLSVRGGVSNLFDKRLYRQGNSFDAGAATYNEPGRAYYVSMTT SF" misc_feature 1018248..1020455 /gene="pirA" /locus_tag="PA0931" /note="outer membrane receptor FepA; Provisional; Region: PRK13528" /db_xref="CDD:237413" gene 1020708..1021607 /gene="cysM" /locus_tag="PA0932" /db_xref="GeneID:881832" CDS 1020708..1021607 /gene="cysM" /locus_tag="PA0932" /EC_number="2.5.1.47" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cysteine synthase B" /protein_id="NP_249623.1" /db_xref="GeneID:881832" /translation="MTVQYPTIADCVGNTPLVRLQRLPGETSNTLLVKLEGNNPAGSV KDRPALSMITRAELRGDIRPGDTLIEATSGNTGIALAMAAAIKGYKMILIMPDNSTAE RKAAMTAYGAELILVSKEEGMEGARDLADKLQREGRGKVLDQFANGDNPEAHYHSTGP EIWQQTGGSITHFVSSMGTTGTIMGVSRYLKEQNPAVQIVGLQPMEGSAIPGIRRWPQ EYLPKIYDASRVDRVVDMHQDEAEDIMRRLAREEGIFCGVSSGGAVAAMLRLSRELEN AVLVAIICDRGDRYLSSGVYDPR" misc_feature 1020717..1021601 /gene="cysM" /locus_tag="PA0932" /note="cysteine synthase CysM; Region: cysM; PRK11761" /db_xref="CDD:236972" misc_feature order(1020756..1020764,1020801..1020803,1020819..1020821, 1020825..1020827,1020951..1020953,1020960..1020962, 1021008..1021013,1021020..1021025,1021032..1021037, 1021197..1021202,1021452..1021460,1021464..1021472, 1021539..1021541,1021569..1021571,1021578..1021580) /gene="cysM" /locus_tag="PA0932" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:107204" misc_feature order(1020840..1020842,1020930..1020932,1021236..1021253, 1021341..1021343,1021482..1021484,1021557..1021562) /gene="cysM" /locus_tag="PA0932" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:107204" misc_feature 1020840..1020842 /gene="cysM" /locus_tag="PA0932" /note="catalytic residue [active]" /db_xref="CDD:107204" gene 1021616..1022968 /gene="ygcA" /locus_tag="PA0933" /db_xref="GeneID:881477" CDS 1021616..1022968 /gene="ygcA" /locus_tag="PA0933" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD" /protein_id="NP_249624.1" /db_xref="GeneID:881477" /translation="MARNKGGLRFQPSGGARGPAIPVGKKQRLTIERLAHDGRGIAHE AGMTWFVSGGLPGEELEARVLGARSKVVDARSERLFSSSDLRRREPCTVAGRCGGCTL QHLEHGEQLALKQRTLQEQLQRFAGIEPEEWAAPLVGPEFGYRRRARIAVRWDARARR LDVGFRASASQEIVAFDECLVLVPPLQTIARALPALLQDFRKPESIGHVELFHGTASA LLLRHTTALVDEDRQRLAAFCSAHQAQLWLQGAEQPLPVEPAAELGYSLGDWQLTLAY RPGDFVQVNAPVNESMIRQALDWLAPTADERVLDLFCGLGNFSLPLARRVARVVGVEG VAAMVERAGANALANGLGNAHFFQADLSKALAEAPWAEQGFTAVLLDPPRDGAFEAVR EMSSLGARRVVYVSCNPATLARDAGEMARQGYRLKRAGILDMFPQTAHVEAMALFEAG " misc_feature 1021634..1022965 /gene="ygcA" /locus_tag="PA0933" /note="23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; Region: rumA; PRK13168" /db_xref="CDD:237291" protein_bind complement(1022860..1022872) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1023053..1025296 /gene="relA" /locus_tag="PA0934" /db_xref="GeneID:881299" CDS 1023053..1025296 /gene="relA" /locus_tag="PA0934" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="GTP pyrophosphokinase" /protein_id="NP_249625.1" /db_xref="GeneID:881299" /translation="MVQVRAHQPVNTDGSINLEAWLDHVQNLVPGLDRQGLLEACEFA RESEQRAIAAQNSWAEGTSSFQTGLEIAEILADLKLDQESLVAAVIYRGVREGKITLE AVNKHFGPVVAKLIEGVLRMAAISASLNPRHSMVLGTQAQVENLRKMLVAMVDDVRVA LIKLAERTCAIRAVKNADEEKRHRVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLE PDQYKQIAKLLHERRLDREQYIANVMSQLKEALAATGVQADLSGRAKHIYSIWRKMQR KGLDFSQIYDVRAVRVLVPEMRDCYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLH TAVIGPEGKVLEVQIRTHSMHEEAELGVCAHWRYKGTDVKASSNHYEEKISWLRQVLE WHEELGDIGGLAEQLRVDIEPDRVYVFTPDGHAIDLPKGATPLDFAYRVHTEVGHNCR GAKINGRIVPLNYSLQTGEQVEIITGKHSGPSRDWLNSNLGYVTTSRARAKIVHWFKL QARDQNVAAGKALIERELSRLALPPVDFDRLAEKANVRTAEDMFAALGAGDLRLAHLV NYAQQLVEPDRDSEQLELIPRKPSKIGHGKRGDVQIQGVGNLLTQMAGCCQPLPGDPI VGYITLGRGVTIHRQDCATALQLAGREPERMIQVSWGPEPVRTYPVDIAIRAYDRSGL LRDVSQVLLNERINVLAVNTRSNKEDNTATMQLTIEIPGLDALGRLLARVSQLPNIIE ARRNRTP" misc_feature 1023053..1025287 /gene="relA" /locus_tag="PA0934" /note="(p)ppGpp synthase/hydrolase, HD superfamily [Signal transduction mechanisms, Transcription]; Region: SpoT; COG0317" /db_xref="CDD:440086" gene 1025401..1026231 /locus_tag="PA0935" /db_xref="GeneID:881039" CDS 1025401..1026231 /locus_tag="PA0935" /EC_number="3.6.1.9" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="nucleoside triphosphate pyrophosphohydrolase" /protein_id="NP_249626.1" /db_xref="GeneID:881039" /translation="MYRLDDLLHLMARLRDPEFGCPWDLQQSYATIVPHTLEEAYEVA DAIEQGDFPQLREELGDLLFQVVYYSQLAREEDRFAFDEVVDGITRKLIRRHPHVFLD GDLYGKPDAAKLAEAAVKQRWEELKAEERAAKAKEPQQLSLLDDVPVALPALSRAAKL QKRAAQVGFDWPEALPVVDKVREGLDEVLEAMAEGDEGAVGEEVGDLLFVVVNLARHL KVDPEAALRQANGKFERRFRFIERNLREAGRKAEECSLEELDSLWGEAKKAERSAPGC " misc_feature 1025401..1026216 /locus_tag="PA0935" /note="Uncharacterized conserved protein YabN, contains tetrapyrrole methylase and MazG-like pyrophosphatase domain [General function prediction only]; Region: YabN; COG3956" /db_xref="CDD:443156" gene complement(1026274..1027212) /gene="lpxO2" /locus_tag="PA0936" /db_xref="GeneID:878312" CDS complement(1026274..1027212) /gene="lpxO2" /locus_tag="PA0936" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="lipopolysaccharide biosynthetic protein LpxO" /protein_id="NP_249627.1" /db_xref="GeneID:878312" /translation="MSVSLLVKVTLVGLFVASVLFVHFRGRARLPFLRQLVNHSAWFA PYNSLMYLFSSVPSKPYLDRSRFPELDELKNNWQTIREEALNLFDEGYIRAALNNNEA GFGSFFKKGWKRFYLTWYDGPLPSAQQLCPKTVELVSRIPNVKGAMFTLLPGGSHLNP HRDPFGGSLRYHLGLSTPNSDNCRIYVDGQPYAWRDGEDVMFDETFVHWVKNETEQTR VILFCDIERPLRSRLLTRLNRWISGILGRATAPQNVEGERVGSINQAYSVAIRGGNAI GAQVKRFKRAYPKAYRILRPVLAVILLVILYRWIFG" misc_feature complement(1026292..1027191) /gene="lpxO2" /locus_tag="PA0936" /note="Aspartyl/Asparaginyl beta-hydroxylase; Region: Asp_Arg_Hydrox; cl42444" /db_xref="CDD:478204" gene 1027445..1027984 /locus_tag="PA0937" /db_xref="GeneID:880990" CDS 1027445..1027984 /locus_tag="PA0937" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249628.1" /db_xref="GeneID:880990" /translation="MSMSLRDQLLKAGLVNEKQAKQATKQKQKQQRLEHKNQVDKDDS QRQAAEQAKAEKLARDQELNRQQQEKAEKKAKAAQIKQLIEGTRLPKLESDDYYNFVD AKKVKRIAVNDLIRDKLSRGSLAIVSYDGRYEIVPRDAAVKIQERDPRRVVLLNVQSQ EPDEDDPYKDYVVPDDLMW" misc_feature 1027445..1027981 /locus_tag="PA0937" /note="Uncharacterized conserved protein YaiL, DUF2058 family [Function unknown]; Region: YaiL; COG3122" /db_xref="CDD:442356" protein_bind complement(1028084..1028096) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0938" /bound_moiety="AmrZ" gene 1028172..1029500 /locus_tag="PA0938" /db_xref="GeneID:880291" CDS 1028172..1029500 /locus_tag="PA0938" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249629.1" /db_xref="GeneID:880291" /translation="MPSSQLPGASPSEIDLVQLFQQLWASKWLIALIAALATAAALAY ALLAVPTYQVDVLLRPIQTKALEAVNVNGLYALTPREALDRVGNELAAYSGRLEYFEA HPELFQQLNAEGLSPEQAFWKFNQDAFSMQQADLKKDPQAAPFFRLSMQYPQGMDGAA ILNGMLASTIENERQRILDDLQARIDGRLQFLEQDIEGKRASYQATKEGKIARLLEAD SIRRAGLEDELKALRGRLKMVRDSRIQQLNEAIQIATRLGIVKPTTPGALGEVGQDGS RSVFRTEVNNQQIPLYFMGVDALTAERDTLLKRKGDDFTEPRVAKIQQELKQLENNRE VQYLQARKGEERFFENIDKLRGEQARLKTLKASELKIELVRIDQKASTPLKPIKPRKA LVVALGLLGGLVFGVLVALVRAMLRTPRQRVQEDSLPPGVVSLDRSLSGT" misc_feature 1028175..1029344 /locus_tag="PA0938" /note="LPS O-antigen chain length determinant protein, WzzB/FepE family [Cell wall/membrane/envelope biogenesis]; Region: WzzB; COG3765" /db_xref="CDD:442979" gene complement(1029825..1030151) /locus_tag="PA0939" /db_xref="GeneID:878988" CDS complement(1029825..1030151) /locus_tag="PA0939" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249630.1" /db_xref="GeneID:878988" /translation="MDSYRPIACDLHDYLEIACLYRYRLLLELEDGVRFEAEARTTHT RAVRPGGGKEEYLEVAVEGATLLLRLDRLLAITALTEAALFGRIRLREEACSRASGMP SSHLGN" misc_feature complement(1029882..1030136) /locus_tag="PA0939" /note="Modulator of Rho-dependent transcription termination (ROF); Region: ROF; pfam07073" /db_xref="CDD:429276" gene complement(1030157..1030411) /locus_tag="PA0940" /db_xref="GeneID:878258" CDS complement(1030157..1030411) /locus_tag="PA0940" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249631.1" /db_xref="GeneID:878258" /translation="MEVKIFDTHVRTRDGRYLHFDVLVTEELGARAGEFARRWLAGRG IDEADISQGHCSYCHSEIATAEVAEAIRLHGHYILPLEGC" misc_feature complement(1030169..1030411) /locus_tag="PA0940" /note="Domain of unknown function (DUF2024); Region: DUF2024; pfam09630" /db_xref="CDD:430725" gene complement(1030423..1030656) /locus_tag="PA0941" /db_xref="GeneID:878292" CDS complement(1030423..1030656) /locus_tag="PA0941" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249632.1" /db_xref="GeneID:878292" /translation="MTKAIYYHAGCAICVEAERSLLPLLDRKQVDIEVVHLAEQSARI AEAEKAGVKSVPALVVDGQVLHLNFGAALSDLK" misc_feature complement(1030462..1030644) /locus_tag="PA0941" /note="Glutaredoxin [Posttranslational modification, protein turnover, chaperones]; Region: GrxC; COG0695" /db_xref="CDD:440459" gene 1030772..1031332 /locus_tag="PA0942" /db_xref="GeneID:879528" CDS 1030772..1031332 /locus_tag="PA0942" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249633.1" /db_xref="GeneID:879528" /translation="MSAIALYDYLERLTSLMRAWSREQPLVAELQPVQLSALHYLARC NRYSDTPLGVTEYLGLTKGTVSQSLKVLEGRGLISKLPDARDRRSVHLRLTDAGRALI EAVIPPQFLEQAVTALGEKGEHLQGLLRDLLVVIQRQEDVPGFGLCRSCRFHQRRAGS PFCGLTGEPLSDADAELICREHQACG" misc_feature 1030784..1031170 /locus_tag="PA0942" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" gene complement(1031386..1032102) /locus_tag="PA0943" /db_xref="GeneID:880898" /db_xref="PseudoCap:PA0943" CDS complement(1031386..1032102) /locus_tag="PA0943" /note="'Product name confidence: class 4:Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences.'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249634.1" /db_xref="GeneID:880898" /db_xref="PseudoCap:PA0943" /translation="MRKAMLFLLTLLTLPAYAFELKPFTASYTADWKQMPISGNASRS LKALGDGRWQLDFEASMLLASLNEVSTFKVENDTFLPQTYRFARQGLGKGKQIELDFD WSQKQVLGSDRGDAVRQPLNRGQLDKSTYQLVLQHDVADGKKSMSYQIIEGEDVDTYD FRVLGEEKVRTQAGLINAIKVERVRDPGKSNRKTILWFAKDWDYLLVRLYQMETDGKE YQIMLKEGTIDGKTVTGEKS" misc_feature complement(1031476..1032036) /locus_tag="PA0943" /note="Protein of unknown function (DUF3108); Region: DUF3108; pfam11306" /db_xref="CDD:431801" gene complement(1032095..1032763) /gene="purN" /locus_tag="PA0944" /db_xref="GeneID:878144" CDS complement(1032095..1032763) /gene="purN" /locus_tag="PA0944" /EC_number="2.1.2.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphoribosylglycinamide formyltransferase" /protein_id="NP_249635.1" /db_xref="GeneID:878144" /translation="MPKLCNVVVLISGSGSNLQALIDSLRDGATPARIRAVISNRADA YGLERARQAGIQTEVLDHKAYADRESFDEALAQRIDAHEPHLVILAGFMRILSADFVR HYQGRLLNIHPSLLPRHKGLHTHQRALEAGDREHGCSVHFVTEELDGGPLVVQAVIPV ESQDTPERLARRVHEEEHRIYPLAMRWFAEGRLRLGEQGALLDGQALPATGHQIRTKE IRNA" misc_feature complement(1032149..1032748) /gene="purN" /locus_tag="PA0944" /note="Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]; Region: PurN; COG0299" /db_xref="CDD:440068" gene complement(1032763..1033824) /gene="purM" /locus_tag="PA0945" /db_xref="GeneID:879549" CDS complement(1032763..1033824) /gene="purM" /locus_tag="PA0945" /EC_number="6.3.3.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine cyclo-ligase" /protein_id="NP_249636.1" /db_xref="GeneID:879549" /translation="MSSKQPSLSYKDAGVDIDAGEALVERIKGVAKRTARPEVMGGLG GFGALCEIPAGYKQPVLVSGTDGVGTKLRLALNLNKHDSIGQDLVAMCVNDLVVCGAE PLFFLDYYATGKLNVDVAATVVTGIGAGCELAGCSLVGGETAEMPGMYEGEDYDLAGF CVGVVEKAEIIDGSRVQAGDALIALPSSGPHSNGYSLIRKIIEVSGADIAQVQLDGKP LADLLMAPTRIYVKPLLQLIKQTGAVKAMAHITGGGLLDNIPRVLPDNAQAVIDVASW NRPAVFDWLQEQGNVDETEMHRVLNCGVGMVICVAQSDAEKALEVLRAAGEQPWQIGR IETCGADAERVVLNNLKNH" misc_feature complement(1032784..1033815) /gene="purM" /locus_tag="PA0945" /note="Phosphoribosylaminoimidazole (AIR) synthetase [Nucleotide transport and metabolism]; Region: PurM; COG0150" /db_xref="CDD:439920" gene 1034038..1035075 /locus_tag="PA0946" /db_xref="GeneID:881189" CDS 1034038..1035075 /locus_tag="PA0946" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249637.1" /db_xref="GeneID:881189" /translation="MRIARLFVLCFSLLGLPVFAATVPNLYQVHEPVSSQQPGERDAG LVRALQTLLVRLTGNPQAPQNPALAGYLKDPQQLISQYAFENGPPLALVVDFDPTATG NALRAAGLPSWGANRPAVLAWWLNESADGSSLVGDNQASAEPLKRAAQNRGLPLRLPL ADLDEQIVGTPENLTAAQPDALRAASERYAADALLAVDAKEADGKWQAQWRLWMGDSR EQGQAEGATPDALADSVMLAVGNRLSTRFVATPEAATGLTLQVQGATLARYAELQRLL DPFGARLVGVRGDRLDYSVKASPEQLRAQLGLAQLQEIPADSVPLDASGQPAAPSAAV PSSTQLNFRWQ" misc_feature 1034101..1034778 /locus_tag="PA0946" /note="Uncharacterized protein conserved in bacteria (DUF2066); Region: DUF2066; pfam09839" /db_xref="CDD:430869" protein_bind complement(1034643..1034655) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA0947" /bound_moiety="AmrZ" gene 1035277..1035981 /locus_tag="PA0947" /db_xref="GeneID:881685" CDS 1035277..1035981 /locus_tag="PA0947" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="DNA replication initiation factor" /protein_id="NP_249638.1" /db_xref="GeneID:881685" /translation="MKPIQLPLSVRLRDDATFANYYPGANAAALGYVERLCEAEAGWA ESLIYLWGHDGVGRSHLLQAACLRFEQFEERTIYLPMADLVQYGPEIFDDLEQCELVC IDDLDVLVGKREWEEGLFHLFNRLRDTGRRLLLAASKSPRELQVKLPDLKSRLTMALI FQLHGLSDEDKLRALQLRASRRGLHLTDEVGRFILNRGSRSMNSLFDLLEQLDRASLQ AQRKLTIPFLKETLGW" misc_feature 1035289..1035975 /locus_tag="PA0947" /note="DnaA regulatory inactivator Hda; Region: DnaA_homol_Hda; TIGR03420" /db_xref="CDD:274571" gene complement(1036158..1036577) /locus_tag="PA0948" /db_xref="GeneID:878332" CDS complement(1036158..1036577) /locus_tag="PA0948" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249639.1" /db_xref="GeneID:878332" /translation="MARKNKPLPEVAWLQPRLALSRAISLGSFVGLVLLILIRDLIYA DAHGAASWVPWLVLAFKLLPLLVVAPGLLMGSARGHAWACYVVNLYFILGVLAAFDPT QRLFGWAEVLLSVTLFCAALLYTRWRFQYDRRVAGER" misc_feature complement(1036161..1036544) /locus_tag="PA0948" /note="Uncharacterized membrane protein [Function unknown]; Region: COG3308" /db_xref="CDD:442537" gene complement(1036579..1037175) /gene="wrbA" /locus_tag="PA0949" /db_xref="GeneID:882021" CDS complement(1036579..1037175) /gene="wrbA" /locus_tag="PA0949" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NAD(P)H dehydrogenase" /protein_id="NP_249640.1" /db_xref="GeneID:882021" /translation="MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPAVS TECEAVAPDIPAEGALYATLEDLKNCAGLALGSPTRFGNMASPLKYFLDGTSSLWLTG SLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLVLGIPYSEPALLETRGGGTPY GASHFAGADGKRSLDEHELTLCRALGKRLAETAGKLGS" misc_feature complement(1036588..1037160) /gene="wrbA" /locus_tag="PA0949" /note="NADPH-dependent FMN reductase; Region: FMN_red; cl00438" /db_xref="CDD:469770" gene complement(1037172..1037525) /locus_tag="PA0950" /db_xref="GeneID:881999" CDS complement(1037172..1037525) /locus_tag="PA0950" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="arsenate reductase" /protein_id="NP_249641.1" /db_xref="GeneID:881999" /translation="MSELILLHNPRCSKSRAALELLEARGLQPQVVRYLETPPSAAEL KAILAKLGIPARQLLRTGEDEYKALGLDEPSLGEEAIIEAMARHPKLIERPVLVAGDK AVVGRPPERVLEILA" misc_feature complement(1037181..1037510) /locus_tag="PA0950" /note="Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the...; Region: ArsC_ArsC; cd03034" /db_xref="CDD:239332" misc_feature complement(order(1037205..1037207,1037244..1037246, 1037346..1037348,1037490..1037492)) /locus_tag="PA0950" /note="catalytic residues [active]" /db_xref="CDD:239332" gene 1037650..1038885 /locus_tag="PA0951" /db_xref="GeneID:881910" CDS 1037650..1038885 /locus_tag="PA0951" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249642.1" /db_xref="GeneID:881910" /translation="MREHFNDGVEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMT VMFSMLSLIPAFHGMGESIQTFIFRNFVPSAGEAVETYLKSFTTQARHLTWVGVVFLA VTAFTMLVTIEKAFNEIWRVRQPRRGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLS LLHGPDALPGAETLLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGVFTAVLFEAA KTLFGLYVSLFPGYQLIYGAFATVPIFLLWIYLSWMIVLFGAVLVCNLSSSRLWRRRS LPKLIVLLGVLRVFLQRQQLGQSLRLTHLHRAGWLLPEDEWEELLDFLEKEQFVCRAG GGEWVLCRDLGAYSLHRLLNRCPWPMPSRERMPASLDEAWYPPFQQAMERLQVEQEAL FGESLAHWLADGTSGAKVT" misc_feature 1037650..1038435 /locus_tag="PA0951" /note="virulence factor BrkB family protein; Region: PRK01637; cl07918" /db_xref="CDD:471781" gene 1039044..1039229 /locus_tag="PA0951a" /db_xref="GeneID:17373345" CDS 1039044..1039229 /locus_tag="PA0951a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719737.1" /db_xref="GeneID:17373345" /translation="MSNKVVHLHHKDEQAALERLNRITGLQFSSWPESLVPARSVSEP SPEKARDEPLLDQVRQG" gene complement(1039240..1039623) /locus_tag="PA0952" /db_xref="GeneID:879253" CDS complement(1039240..1039623) /locus_tag="PA0952" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249643.1" /db_xref="GeneID:879253" /translation="MKDHLIGSVPAHLVDAARPTLTAHEGLVADYNIAAWLHLPDACD LLVSLVVSYLDGGRQREVAVDHGRIDRQQRILLSGIARLPVRQKVENMQVRLKSATAF SRLVVEEFFVQAVEQENRSQQVSEA" gene 1039968..1040432 /locus_tag="PA0953" /db_xref="GeneID:881965" CDS 1039968..1040432 /locus_tag="PA0953" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="NP_249644.1" /db_xref="GeneID:881965" /translation="MGSWLRPLGAAAVLFLAGCSADYGVDQDGRPVAAEQLDGHWLVV NYWADWCAPCRTEIPEMNRLAQVLEGQGGRVIGVNFDGLRDAELKKSADGMGIRFTVL ADDPAPRFKLPRSEALPVTYIVDARGEMRQRLLGEQTADGILKQLEALREGR" misc_feature 1040037..1040375 /locus_tag="PA0953" /note="TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a...; Region: TlpA_like_family; cd02966" /db_xref="CDD:239264" misc_feature order(1040118..1040120,1040127..1040129) /locus_tag="PA0953" /note="catalytic residues [active]" /db_xref="CDD:239264" gene 1040432..1040707 /locus_tag="PA0954" /db_xref="GeneID:882022" CDS 1040432..1040707 /locus_tag="PA0954" /EC_number="3.6.1.7" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acylphosphatase" /protein_id="NP_249645.1" /db_xref="GeneID:882022" /translation="MARICLHAYVGGRVQGVGFRQATREEADRLELDGWVRNLDDGRV EVVWEGEEDRAKALERWLGRGPRHAEVSAVEVEQMPLQGIAGFVVRR" misc_feature 1040432..1040704 /locus_tag="PA0954" /note="acylphosphatase; Provisional; Region: PRK14442" /db_xref="CDD:172918" gene complement(1040724..1041680) /locus_tag="PA0955" /db_xref="GeneID:881993" CDS complement(1040724..1041680) /locus_tag="PA0955" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249646.1" /db_xref="GeneID:881993" /translation="MPTGRPLRLFAAALCGGLLLSGCANQLPQRSEHEERVERKLLEH TLQVDVGQPDVLELPQRRVRINDQKSFEVTEFEVTRRYDRYTPYQAWREIYEIPLGAV ALVAGVGANIVNVVTFGSVPDNITHGWINYGLAGVNPFMNVESNGRAEQNLASIDEKQ RDKRLEYSSLPWAERPVLVSSGKELNELLTDRHGVLRLNLLDSPFAEQDISRISQIHL SVSDPQDGTRADASLRVSRSLRGKLLEAHALIYDDLEGDDVHHWVHRVKRLAELGLEE EASELEQSLIELTRNDPELQQQFMHALLRDAGRLAADPGETP" gene complement(1041689..1043404) /gene="proS" /locus_tag="PA0956" /db_xref="GeneID:879563" CDS complement(1041689..1043404) /gene="proS" /locus_tag="PA0956" /EC_number="6.1.1.15" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="proline--tRNA ligase" /protein_id="NP_249647.1" /db_xref="GeneID:879563" /translation="MRTSQYLLSTLKETPADAVVISHQLLLRAGMIRRLASGLYTWLP MGLRVLRKVETIVREEMNAAGALEVLMPAVQPAELWQESGRWEQYGPELLRLKDRHER EFCVGPTHEEVITDLARNELNSYKQLPINFYQIQTKFRDEIRPRFGLMRGREFIMKDA YSFHLSQDSLQQTYDGMYQAYSKIFSRLGLDFRPVQADNGSIGGSGSHEFHVLANSGE DDIVFSDSSDYAANIEKAEAVPRESARGSATEDMRLVDTPNTKTIAALVDGFQLPIEK TIKTLVVHGAEEGTLVALIVRGDHELNEIKAANQPLVASPLVFASEAEIRAAIGAGPG SLGPVNLPIACIVDRSVALMSDFAAGANIEDKHYFGVNWERDLPLPEVADLRNVVEGD PSPDGKGTLVIKRGIEVGHIFQLGTKYSEAMKLSVLSEQGKPVNLIMGCYGIGVSRVV AAAIEQNHDERGILWPSALAPFQIALVPLKYETESVKQATDKLYAELTAAGFEVLLDD RDKKTSPGVKFADMELIGIPHRIVISDRGLSEGVLEYKGRRDSESQNLPIGELMSFIT EKLSR" misc_feature complement(1041695..1043404) /gene="proS" /locus_tag="PA0956" /note="prolyl-tRNA synthetase; Provisional; Region: PRK09194" /db_xref="CDD:236405" gene 1043512..1043919 /locus_tag="PA0957" /db_xref="GeneID:882127" CDS 1043512..1043919 /locus_tag="PA0957" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249648.1" /db_xref="GeneID:882127" /translation="MNAAQVQALIRMGLPMAEDIDFRVERLDERHALARIPFHGKLVR PGGTLSGPTIMALADAAMYAVILGRLGAVEMAVTSNLNINFLSKPRPEDLLAEASILK LGRRQVVCEVGVFSQSNEEDLVAHVTGTYALPL" misc_feature 1043569..1043910 /locus_tag="PA0957" /note="PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not...; Region: PaaI_thioesterase; cd03443" /db_xref="CDD:239527" misc_feature order(1043656..1043658,1043743..1043745,1043764..1043775) /locus_tag="PA0957" /note="CoenzymeA binding site [chemical binding]; other site" /db_xref="CDD:239527" misc_feature order(1043659..1043661,1043665..1043667,1043674..1043676, 1043746..1043760,1043764..1043766) /locus_tag="PA0957" /note="subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:239527" misc_feature order(1043662..1043664,1043686..1043691,1043698..1043703, 1043743..1043745) /locus_tag="PA0957" /note="PHB binding site [active]" /db_xref="CDD:239527" gene complement(1043983..1045314) /gene="oprD" /locus_tag="PA0958" /db_xref="GeneID:881970" CDS complement(1043983..1045314) /gene="oprD" /locus_tag="PA0958" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="porin D" /protein_id="NP_249649.1" /db_xref="GeneID:881970" /translation="MKVMKWSAIALAVSAGSTQFAVADAFVSDQAEAKGFIEDSSLDL LLRNYYFNRDGKSGSGDRVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGTSDK TGTGNLPVMNDGKPRDDYSRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTA TGFQLQSSEFEGLDLEAGHFTEGKEPTTVKSRGELYATYAGETAKSADFIGGRYAITD NLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTNDEGKAKAGDISNTT WSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFGRNGSGAGGDSIFLANSVQYSDFNGP GEKSWQARYDLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHE TNLEAKYVVQSGPAKDLSFRIRQAWHRANADQGEGDQNEFRLIVDYPLSIL" misc_feature complement(1043992..1045215) /gene="oprD" /locus_tag="PA0958" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" protein_bind complement(1045459..1045501) /experiment="DNAse footprinting [PMID: 10464217]" /experiment="EMSA [PMID: 10464217]" /experiment="RNA dot blot [PMID: 10464217]" /note="Transcription factor binding site for NP_249584.; Evidence of regulation for: PA0958" /bound_moiety="ArgR" gene 1045832..1046461 /locus_tag="PA0959" /db_xref="GeneID:882085" CDS 1045832..1046461 /locus_tag="PA0959" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249650.1" /db_xref="GeneID:882085" /translation="MFGVALYSFGRHLMGRSAGEARQAGAGGCVGLLWPGGEVSCAAV TAGPFPEGGAKLSMNDGRTGEVSMFALDPRLEQDTLLLGDFPLSRLLLMNDARYPWFI LVPRREDVTELFQLDVDDRQALWREATLLAEVLKDTFRADKMNVANLGNVVSQLHMHV IVRRRGDDAWPGPVWGRHPARPYSSEQVEAIRGKLRMVLTDGFRFAGEA" misc_feature <1045880..>1046029 /locus_tag="PA0959" /note="This family includes acyl- and aryl-CoA ligases, as well as the adenylation domain of nonribosomal peptide synthetases and firefly luciferases. The adenylate-forming enzymes catalyze an ATP-dependent two-step reaction to first activate a carboxylate...; Region: Adenylate forming domain, Class I superfamily; cl17068" /db_xref="CDD:473059" misc_feature 1046051..1046329 /locus_tag="PA0959" /note="HIT domain; Region: HIT; pfam01230" /db_xref="CDD:395984" misc_feature order(1046105..1046107,1046111..1046113,1046135..1046137, 1046273..1046275,1046288..1046290,1046300..1046302, 1046306..1046308) /locus_tag="PA0959" /note="nucleotide binding site/active site [active]" /db_xref="CDD:238606" misc_feature order(1046294..1046296,1046300..1046302,1046306..1046314) /locus_tag="PA0959" /note="HIT family signature motif [active]" /db_xref="CDD:238606" misc_feature 1046300..1046302 /locus_tag="PA0959" /note="catalytic residue [active]" /db_xref="CDD:238606" gene 1046462..1046671 /locus_tag="PA0960" /db_xref="GeneID:882073" CDS 1046462..1046671 /locus_tag="PA0960" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249651.1" /db_xref="GeneID:882073" /translation="MELDARMDDLECRQAFQDDTLQALNDVVVEQQRSIERLQLQVAA LIKRLEDVQGLVGEAGEDEAPPPHY" misc_feature 1046462..1046668 /locus_tag="PA0960" /note="hypothetical protein; Provisional; Region: PRK00295" /db_xref="CDD:166895" gene complement(1046720..1047334) /locus_tag="PA0961" /db_xref="GeneID:882013" CDS complement(1046720..1047334) /locus_tag="PA0961" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cold-shock protein" /protein_id="NP_249652.2" /db_xref="GeneID:882013" /translation="MLKIVLLVTGVAALLLSFIPSLRTEATPFLQHPDAIYLAILGLI NLLFAPVLQSSHPTRPLQAGAAALLVLGVVLQALILLAPLPTIADQPAIVLPLLSLVL ATALQLAGSLKPGKPVSRSASAPAALGGSQDSGNRETGTVKWFNTSKGFGFISRDSGE DIFVHFRAIRGEGHRILIEGQRVEFSVVQRDKGLQAEDVIASRR" misc_feature complement(1047005..1047334) /locus_tag="PA0961" /note="cold shock protein N-terminal extension domain; Region: CSP_NTE_dom; NF041604" /db_xref="CDD:469488" misc_feature complement(1046732..1046926) /locus_tag="PA0961" /note="Cold shock protein, CspA family [Transcription]; Region: CspC; COG1278" /db_xref="CDD:440889" gene complement(1047549..1048019) /locus_tag="PA0962" /db_xref="GeneID:881882" CDS complement(1047549..1048019) /locus_tag="PA0962" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="DNA-binding stress protein" /protein_id="NP_249653.1" /db_xref="GeneID:881882" /translation="MEINIGIGEQDRAAIAEGLSRLLADTYTLYLKTHNFHWNVTGPM FNTLHLMFEGQYTELAVAVDDIAERIRALGFPAPGTYAAYARLSSIKEEEGVPEAEEM IRQLVQGQEAVVRTARSIFPLLDKVSDEPTADLLTQRMQVHEKTAWMLRSLLAS" misc_feature complement(1047552..1048016) /locus_tag="PA0962" /note="DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism, Defense mechanisms]; Region: Dps; COG0783" /db_xref="CDD:440546" gene 1048459..1050234 /gene="aspS" /locus_tag="PA0963" /db_xref="GeneID:881917" CDS 1048459..1050234 /gene="aspS" /locus_tag="PA0963" /EC_number="6.1.1.12" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aspartate--tRNA ligase" /protein_id="NP_249654.1" /db_xref="GeneID:881917" /translation="MMRSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDVRDREG LAQVVFDPDRAETFAKADRVRSEFVVKITGKVRLRPEGARNPNMASGSIEVLGYELEV LNQAETPPFPLDEYSDVGEETRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGF LDVETPILGRPTPEGARDYLVPSRTYPGHFFALPQSPQLFKQLLMVAGFDRYYQIAKC FRDEDLRADRQPEFTQIDIETSFLDESDIIGITEKMVRQLFKEVLDVEFDEFPHMPFE EAMRRYGSDKPDLRIPLELVDVADQLKEVEFKVFSGPANDPKGRVAALRVPGAASMPR SQIDDYTKFVGIYGAKGLAYIKVNERAKGVEGLQSPIVKFIPEANLNVILDRVGAVDG DIVFFGADKAKIVCDALGALRIKVGHDLKLLTREWAPMWVVDFPMFEENDDGSLSALH HPFTSPKCTPAELEANPGAALSRAYDMVLNGTELGGGSIRIHDKSMQQAVFRVLGIDE AEQEEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGASSIREVIAFPKTQSAGDVMT QAPGSVDGKALRELHIRLREQPKAE" misc_feature 1048459..1050228 /gene="aspS" /locus_tag="PA0963" /note="Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: AspS; COG0173" /db_xref="CDD:439943" gene 1050301..1051047 /gene="pmpR" /locus_tag="PA0964" /db_xref="GeneID:882153" /db_xref="PseudoCap:PA0964" CDS 1050301..1051047 /gene="pmpR" /locus_tag="PA0964" /note="'Product name confidence: class 4:Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences.'" /codon_start=1 /transl_table=11 /product="transcriptional regulator PmpR" /protein_id="NP_249655.1" /db_xref="GeneID:882153" /db_xref="PseudoCap:PA0964" /translation="MAGHSKWANIKHRKERQDAKKGKIFTKLIRELTVAARQGGGVPA DNPRLRLAVDKALTANMTRDTIDRAIARGVGSNDADNMVELSYEGYAPSGVAIIVEAM TDNRNRTAAEVRHAFSKCGGNLGTDGSVAYMFERKGQISFAPGVDEEALMDAALEAGA DDVVVNDDGSIDVFTTFADFISVNEALAAAGFKGDEAEVTMIPSTTATLDLETAQKVL KLIDMLEDLDDVQNVYSNADIPDDVMAQLG" misc_feature 1050301..1051041 /gene="pmpR" /locus_tag="PA0964" /note="YebC/PmpR family DNA-binding transcriptional regulator; Region: PRK00110" /db_xref="CDD:234640" gene 1051132..1051656 /gene="ruvC" /locus_tag="PA0965" /db_xref="GeneID:882131" CDS 1051132..1051656 /gene="ruvC" /locus_tag="PA0965" /EC_number="3.1.22.4" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="crossover junction endodeoxyribonuclease RuvC" /protein_id="NP_249656.1" /db_xref="GeneID:882131" /translation="MTLILGIDPGSRITGFGVVRETARGCEYVASGCIRTGNGPLHER LHVVFRSVREVIRTHGPTALSIEQVFMARNADSALKLGQARGAAIVAAMEEGLSVAEY TASQVKQAVVGTGGADKQQVQMMVMHLLKLTQKPQIDASDALAIALCHAHTQQSLVPH GLVGARRRGGRLRL" misc_feature 1051132..1051605 /gene="ruvC" /locus_tag="PA0965" /note="Holliday junction resolvase; Reviewed; Region: ruvC; PRK00039" /db_xref="CDD:234587" misc_feature order(1051153..1051155,1051330..1051332,1051546..1051548, 1051555..1051557) /gene="ruvC" /locus_tag="PA0965" /note="active site" /db_xref="CDD:438562" misc_feature order(1051159..1051167,1051234..1051236,1051240..1051242, 1051261..1051263,1051336..1051344,1051348..1051350, 1051354..1051356,1051360..1051362,1051369..1051374, 1051444..1051446) /gene="ruvC" /locus_tag="PA0965" /note="nucleic acid substrate binding site [nucleotide binding]; other site" /db_xref="CDD:438562" misc_feature order(1051252..1051260,1051264..1051269,1051276..1051278, 1051345..1051347,1051354..1051356,1051363..1051368, 1051375..1051380,1051387..1051392,1051396..1051401, 1051408..1051413,1051420..1051422,1051426..1051428) /gene="ruvC" /locus_tag="PA0965" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:438562" gene 1051673..1052278 /gene="ruvA" /locus_tag="PA0966" /db_xref="GeneID:879609" CDS 1051673..1052278 /gene="ruvA" /locus_tag="PA0966" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="Holliday junction ATP-dependent DNA helicase RuvA" /protein_id="NP_249657.1" /db_xref="GeneID:879609" /translation="MIGRLRGTLAEKQPPHLILDVNGVGYEVEVPMTTLYRLPSVGEP VTLHTHLVVREDAHLLYGFAEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCV QAQDTSTLVKIPGVGKKTAERLLVELKDRFKAWENMPTIAPLVMEPRASATVSSAEAD AVSALIALGFKPQEASRAVAAVPGEDLSSEEMIRQALKGMV" misc_feature 1051673..1052272 /gene="ruvA" /locus_tag="PA0966" /note="Holliday junction branch migration protein RuvA; Region: ruvA; PRK00116" /db_xref="CDD:234645" gene 1052289..1053347 /gene="ruvB" /locus_tag="PA0967" /db_xref="GeneID:882028" CDS 1052289..1053347 /gene="ruvB" /locus_tag="PA0967" /EC_number="3.6.1.-" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="Holliday junction ATP-dependent DNA helicase RuvB" /protein_id="NP_249658.1" /db_xref="GeneID:882028" /translation="MIEPDRLISAVSGRERDEQLDRAIRPLKLADYIGQPSVREQMEL FIHAARGRQEALDHTLIFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALL TNLEAGDVLFVDEIHRLSPIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVG ATTRAGMLTNPLRDRFGIVQRLEFYNVEDLATIVSRSAGILGLEIEPQGAAEIAKRAR GTPRIANRLLRRVRDFAEVRGQGDITRVIADKALNLLDVDERGFDHLDRRLLLTMIDK FDGGPVGIDNLAAALSEERHTIEDVLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIP KRLGPGVTTDLFTSEDGN" misc_feature 1052289..1053305 /gene="ruvB" /locus_tag="PA0967" /note="Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB [Replication, recombination and repair]; Region: RuvB; COG2255" /db_xref="CDD:441856" protein_bind 1053333..1053351 /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA0964" /bound_moiety="Fur" gene 1053400..1053846 /locus_tag="PA0968" /db_xref="GeneID:882155" CDS 1053400..1053846 /locus_tag="PA0968" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249659.1" /db_xref="GeneID:882155" /translation="MRAQHGGKPFQQRFRVYYEDTDAGGIVYYVNYLKFMERARTERL RALGFAQSQLVGDNLLFVVHSAEARYHAPAKLDDELLVSAEVEELNRASLKFRQQVRR ASDSVLLCEGRFLVACVRADTLKPRAIPETLRAAFAGSPDSFSAGD" misc_feature 1053427..1053807 /locus_tag="PA0968" /note="tol-pal system-associated acyl-CoA thioesterase; Region: thio_ybgC; TIGR02799" /db_xref="CDD:274304" misc_feature order(1053508..1053510,1053580..1053582,1053586..1053588, 1053667..1053678) /locus_tag="PA0968" /note="active site" /db_xref="CDD:238329" gene 1053848..1054543 /gene="tolQ" /locus_tag="PA0969" /db_xref="GeneID:882055" CDS 1053848..1054543 /gene="tolQ" /locus_tag="PA0969" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="translocation protein TolQ" /protein_id="NP_249660.1" /db_xref="GeneID:882055" /translation="MEPNVVDHTSMWSLISNASIVVQLVMLTLVAASVTSWIMIFQRG NAMRAAKKALDAFEERFWSGIDLSKLYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQP GVDPDAVMEGVARAMRVAISREEEKLEASLPFLATVGSTSPYVGLFGTVWGIMNSFRG LATVQQATLATVAPGIAEALIATAIGLFAAIPAVIAYNRFSARSEMLIGRYYTFADEF QAILHRKVHTSDD" misc_feature 1053875..1054519 /gene="tolQ" /locus_tag="PA0969" /note="TolQ protein; Region: tolQ; TIGR02796" /db_xref="CDD:131843" gene 1054566..1055006 /gene="tolR" /locus_tag="PA0970" /db_xref="GeneID:882113" CDS 1054566..1055006 /gene="tolR" /locus_tag="PA0970" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="translocation protein TolR" /protein_id="NP_249661.1" /db_xref="GeneID:882113" /translation="MARVRHKRKPVAEMNVVPYIDVMLVLLVIFMVTAPMLNQGVKVD LPKVSSEALPQDNNKQVLTLSVKADGSYYWNVGSEVDTEKQTDSAVSLEQMTDAVTKI MSARPDTQVFIRGDKAVNYGAVVGAMGALQQAGVPNVGLITEAP" misc_feature 1054593..1054997 /gene="tolR" /locus_tag="PA0970" /note="TolR protein; Region: tolR; TIGR02801" /db_xref="CDD:274306" gene 1055009..1056052 /gene="tolA" /locus_tag="PA0971" /db_xref="GeneID:882033" CDS 1055009..1056052 /gene="tolA" /locus_tag="PA0971" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="translocation protein TolA" /protein_id="NP_249662.1" /db_xref="GeneID:882033" /translation="MKQQFERSPSESYFWPVVLAVVLHVLIFAMLFVSWAFAPELPPS KPIVQATLYQLKSKSQATTQTNQKIAGEAKKTASKQYEVEQLEQKKLEQQKLEQQKLE QQQVAAAKAAEQKKADEARKAEAQKAAEAKKADEAKKAAEAKAAEQKKQADIAKKRAE DEAKKKAAEDAKKKAAEDAKKKAAEEAKKKAAAEAAKKKAAVEAAKKKAAAAAAAARK AAEDKKARALAELLSDTTERQQALADEVGSEVTGSLDDLIVNLVSQQWRRPPSARNGM SVEVLIEMLPDGTITNASVSRSSGDKPFDSSAVAAVRNVGRIPEMQQLPRATFDSLYR QRRIIFKPEDLSL" misc_feature 1055048..1056034 /gene="tolA" /locus_tag="PA0971" /note="TolA protein; Region: tolA_full; TIGR02794" /db_xref="CDD:274303" misc_feature 1055807..1056037 /gene="tolA" /locus_tag="PA0971" /note="TonB family C-terminal domain; Region: tonB_Cterm; TIGR01352" /db_xref="CDD:273570" gene 1056049..1057347 /gene="tolB" /locus_tag="PA0972" /db_xref="GeneID:881864" CDS 1056049..1057347 /gene="tolB" /locus_tag="PA0972" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="translocation protein TolB" /protein_id="NP_249663.1" /db_xref="GeneID:881864" /translation="MSTLIRIALFALALMAGAAQAADPLVISSGNDRAIPIAVVPFGF QGGNVLPEDMSNIIGNDLRNSGYFEPLPRQNMISQPAQASEVIFRDWKAVGVNYVMVG NIVPAGGRLQVQYALFDVGTEQQVLTGSVTGSTDQLRDMSHYIADQSFEKLTGIKGAF STKMLYVTAERFSVDNTRYTLQRSDYDGARPVTLLQSREPIVSPRFSPDGRRIAYVSF EQKRPRIFIQYVDTGRREQITNFEGLNGAPAFSPDGNRLAFVLSRDGNPEIYVMDLGS RALRRLTNNLAIDTEPFWGKDGSTLYFTSDRGGKPQIYKMNVNSGAVDRVTFIGNYNA NPKLSADEKTLVMVHRQQGYTNFQIAAQDLQRGNLRVLSNTTLDDSPTVAPNGTMLIY ATRQQDRGVLMLVSINGRVRIPLPTAQGDVREPSWSPYLN" misc_feature 1056121..1057332 /gene="tolB" /locus_tag="PA0972" /note="tol-pal system beta propeller repeat protein TolB; Region: propeller_TolB; TIGR02800" /db_xref="CDD:274305" gene 1057400..1057906 /gene="oprL" /locus_tag="PA0973" /db_xref="GeneID:882991" CDS 1057400..1057906 /gene="oprL" /locus_tag="PA0973" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="peptidoglycan associated lipoprotein OprL" /protein_id="NP_249664.1" /db_xref="GeneID:882991" /translation="MEMLKFGKFAALALAMAVAVGCSSKGGDASGEGANGGVDPNAGY GANSGAVDGSLSDEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKGSGQRVVLEG HTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGKERPVATGHDEQSWAQ NRRVELKK" misc_feature 1057595..1057900 /gene="oprL" /locus_tag="PA0973" /note="peptidoglycan-associated lipoprotein; Region: Pal_lipo; TIGR02802" /db_xref="CDD:274307" misc_feature order(1057610..1057615,1057709..1057714,1057721..1057723, 1057733..1057738,1057745..1057747,1057871..1057873, 1057883..1057885) /gene="oprL" /locus_tag="PA0973" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene 1057916..1058740 /locus_tag="PA0974" /db_xref="GeneID:877786" CDS 1057916..1058740 /locus_tag="PA0974" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249665.1" /db_xref="GeneID:877786" /translation="MPKHLRVLTFLALSLPLAAWAEVPVYDGVAANNGGNVPPSGYGT AGAGGAFAGGGVTTPTSVQGELFMQLQQMQDELARLRGTLEEQQNQIQQLKQESLERY QDLDRRISGGGAPAAQNSAPAGAINANGAPAAPAGNNAPAPSSEPGDPAKEKLYYDAA FDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGDLQGAGQAFARVSQ SYPSSQKVPDSLYKLADVERRLGNNDKAKGILQQVISQYPGTSAAQLAQRDLKNLR" misc_feature <1058093..1058248 /locus_tag="PA0974" /note="TolA binding protein trimerization; Region: TolA_bind_tri; pfam16331" /db_xref="CDD:435282" misc_feature 1058375..1058725 /locus_tag="PA0974" /note="tol-pal system protein YbgF; Region: tol_pal_ybgF; TIGR02795" /db_xref="CDD:188247" misc_feature order(1058375..1058377,1058384..1058389,1058396..1058401, 1058405..1058407,1058486..1058488,1058495..1058500, 1058507..1058512,1058516..1058521,1058597..1058599, 1058606..1058611,1058618..1058623,1058630..1058632) /locus_tag="PA0974" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature 1058375..1058458 /locus_tag="PA0974" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 1058480..1058572 /locus_tag="PA0974" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 1058594..1058680 /locus_tag="PA0974" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" gene 1058812..1059606 /locus_tag="PA0975" /db_xref="GeneID:877667" CDS 1058812..1059606 /locus_tag="PA0975" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="radical activating enzyme" /protein_id="NP_249666.1" /db_xref="GeneID:877667" /translation="MVSARLIFVPLHARPSGISSATTGYVPWRSFIYRNGGGRPVQSS RPWLNMQQTLRITEIFYSLQGETRTAGLPTVFVRLTGCPLRCHYCDTAYAFSGGDVVS LDAIFERVAAYKPRYICVTGGEPLAQPNCISLLERLCDAGYEVSLETSGALDVSRVDP RVSKVLDLKTPGSGEVGRNRYENIPLLTDNDQVKFVVCSREDYDWAVSKLIEYRLDQR AGEVLFSPSHHQVSARELADWIVADNLPVRLQLQLHKILWNDEPGH" misc_feature 1058971..1059603 /locus_tag="PA0975" /note="putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE, gammaproteobacterial type; Region: rSAM_QueE_gams; TIGR04349" /db_xref="CDD:275145" gene 1059622..1060296 /locus_tag="PA0976" /db_xref="GeneID:878060" CDS 1059622..1060296 /locus_tag="PA0976" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="7-cyano-7-deazaguanine synthase" /protein_id="NP_249667.1" /db_xref="GeneID:878060" /translation="MNQKKAVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAE LQAAERVARQLGVIEHKVIGLDLNGMGGSALTDESIAVPESPSEGIPVTYVPARNTVF LSLALGWAEVLDARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRI QAPLQYLSKAQIIQAGVARGVDYGLTVSCYQADEQGRACGKCDSCRLRADGFAAAGIS DPTPYF" misc_feature 1059625..1060290 /locus_tag="PA0976" /note="7-cyano-7-deazaguanine synthase (queuosine biosynthesis) [Translation, ribosomal structure and biogenesis]; Region: QueC; COG0603" /db_xref="CDD:440368" gene 1060356..1060431 /locus_tag="PA0976.1" /db_xref="GeneID:3240278" tRNA 1060356..1060431 /locus_tag="PA0976.1" /product="tRNA-Lys" /db_xref="GeneID:3240278" gene complement(1061207..1062034) /locus_tag="PA0978" /db_xref="GeneID:877607" CDS complement(1061207..1062034) /locus_tag="PA0978" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249669.1" /db_xref="GeneID:877607" /translation="MEVVCSAFDVARSCYYVHRLRRRRVDARRIVLRSQVNQLFSQSR GSAGSRSILGMLREEGVTIGRFRVRRLMRELGLVSKQPGSHAYKQATVERPDIPNRLN REFATEHPNQVWCGDITYVWAQGRWHYLAAVLDLHTRRVIGWAFSAKPDAELVIKALD MAYEQRGKPQQVLFHSDQGSQYASRLFRQRLWRYRMQQSMSRRGNCWDNSPMERLFRS LKSEWVPSTGYLTAQEAQRDISHYLMHRYNWIRPHQFNDGLPPAVAEEKLNPLSGMG" misc_feature complement(1061240..>1062034) /locus_tag="PA0978" /note="IS3 family transposase; Region: transpos_IS3; NF033516" /db_xref="CDD:468052" gene complement(1062061..1062369) /locus_tag="PA0979" /db_xref="GeneID:878313" CDS complement(1062061..1062369) /locus_tag="PA0979" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249670.1" /db_xref="GeneID:878313" /translation="MSKQRRTFSAEFKREAAALVLDQGYSHIDACRSLGVVDSALRRW VKQLQAERQGVTPKSKALTPEQQKIQELEARINRLEREKAILKKATALLMSDELDRTR " misc_feature complement(1062091..1062369) /locus_tag="PA0979" /note="Transposase InsE and inactivated derivatives [Mobilome: prophages, transposons]; Region: InsE; COG2963" /db_xref="CDD:442203" gene 1062921..1063544 /locus_tag="PA0981" /db_xref="GeneID:878612" CDS 1062921..1063544 /locus_tag="PA0981" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249672.1" /db_xref="GeneID:878612" /translation="MKKSLVMSTVLLVASNFACADEGSNDGSEICRAQGGVEITSLGE VSKGVDVEDVVVCSILPSNMKSSQRAPTLPPLQRMIISAMPSPGTVTVSASGDRKFTT SCRANLYAPRYANFYPDGVSRGTSDLRCVGYNTPGNSSQGCNVSWVGPTDIQLGVEPY GGSVVVNYSCTAFKTTIPVIMSYSYRDGRAVYGEVQNVSGIINVVLN" gene complement(1064555..1065103) /locus_tag="PA0982" /db_xref="GeneID:879193" CDS complement(1064555..1065103) /locus_tag="PA0982" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249673.1" /db_xref="GeneID:879193" /translation="MSIVPGVVHSLYGDAKARWTINEYADLECPFCKVYTPRLKRWVD SHTDVNLVWRHLPLQMHGEAARHQARLVECAGIQGGAKAFWSAIDAIFAQSAGNGGGL PGGTLDFPDLDQARLEKCAKDMDLVDQLIKTDIDTARSNGITATPTLVIQDNQTGRSV KLEGMADETTLLSAIDWLAKDL" misc_feature complement(1064576..1065046) /locus_tag="PA0982" /note="Protein thiol-disulfide isomerase DsbC [Posttranslational modification, protein turnover, chaperones]; Region: DsbG; COG1651" /db_xref="CDD:441257" gene 1065138..1065425 /locus_tag="PA0983" /db_xref="GeneID:879204" CDS 1065138..1065425 /locus_tag="PA0983" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249674.1" /db_xref="GeneID:879204" /translation="MSIQRFTPEFKAEAVRQVIERGYSVAEIAAGFGVSTHSLYKWVK AVTPDKSEKQASELLEAKSEILRLRAQMRRLEEERDILKKPSGSSHTAWRP" misc_feature 1065150..1065389 /locus_tag="PA0983" /note="Transposase InsE and inactivated derivatives [Mobilome: prophages, transposons]; Region: InsE; COG2963" /db_xref="CDD:442203" gene 1065970..1066296 /locus_tag="PA0984" /db_xref="GeneID:878363" CDS 1065970..1066296 /locus_tag="PA0984" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="colicin immunity protein" /protein_id="NP_249675.1" /db_xref="GeneID:878363" /translation="MSFKYYWAKFFWGAFFFVLVAWKGSVFPSLASVNPLVVAGLSTI LFPFSVKLVEDFALKYTEREFWVTGFFSETPAKTGLYAVFYLSCYLFSIPLGMVFLFY KYGKAS" misc_feature 1066048..1066206 /locus_tag="PA0984" /note="Colicin E1 (microcin) immunity protein; Region: Microcin; pfam03526" /db_xref="CDD:112349" gene complement(1066321..1067817) /gene="pyoS5" /locus_tag="PA0985" /db_xref="GeneID:877569" CDS complement(1066321..1067817) /gene="pyoS5" /locus_tag="PA0985" /note="'Product name confidence: class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in, if known).'" /codon_start=1 /transl_table=11 /product="pyocin S5" /protein_id="NP_249676.1" /db_xref="GeneID:877569" /translation="MSNDNEVPGSMVIVAQGPDDQYAYEVPPIDSAAVAGNMFGDLIQ REIYLQKNIYYPVRSIFEQGTKEKKEINKKVSDQVDGLLKQITQGKREATRQERVDVM SAVLHKMESDLEGYKKTFTKGPFIDYEKQSSLSIYEAWVKIWEKNSWEERKKYPFQQL VRDELERAVAYYKQDSLSEAVKVLRQELNKQKALKEKEDLSQLERDYRTRKANLEMKV QSELDQAGSALPPLVSPTPEQWLERATRLVTQAIADKKQLQTTNNTLIKNSPTPLEKQ KAIYNGELLVDEIASLQARLVKLNAETTRRRTEAERKAAEEQALQDAIKFTADFYKEV TEKFGARTSEMARQLAEGARGKNIRSSAEAIKSFEKHKDALNKKLSLKDRQAIAKAFD SLDKQMMAKSLEKFSKGFGVVGKAIDAASLYQEFKISTETGDWKPFFVKIETLAAGAA ASWLVGIAFATATATPIGILGFALVMAVTGAMIDEDLLEKANNLVISI" misc_feature complement(1067263..1067817) /gene="pyoS5" /locus_tag="PA0985" /note="Colicin pore forming domain; Region: Colicin; pfam01024" /db_xref="CDD:425995" misc_feature complement(1066336..1066890) /gene="pyoS5" /locus_tag="PA0985" /note="Colicin pore forming domain; Region: Colicin; pfam01024" /db_xref="CDD:425995" gene 1068193..1068456 /locus_tag="PA0986" /db_xref="GeneID:878309" CDS 1068193..1068456 /locus_tag="PA0986" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249677.1" /db_xref="GeneID:878309" /translation="MKKRFTEEQILDFLKQAEAGVPVKELCRRHGFSDASFYTWRAKF GGMTVADAKRLKDLELENSRLKKLLAEAHLDIESLKVVARGKG" misc_feature 1068214..>1068444 /locus_tag="PA0986" /note="IS3 family transposase; Region: transpos_IS3; NF033516" /db_xref="CDD:468052" gene 1068489..1069331 /locus_tag="PA0987" /db_xref="GeneID:878336" CDS 1068489..1069331 /locus_tag="PA0987" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249678.1" /db_xref="GeneID:878336" /translation="MQARTGISERRACQLIGLSRSVLRYQPRASVQNTELQAQLVELA QERRRFGYRRLHILLRRAGVQVNHKRIYRLYRAAGLMVKRRRRRHGIAVERERLSLPS APNQVWSMDFVFDALSTGRRIKCLTVVDDFTKESVGILVEHGISGFRVTRALDEMARF RGYPKAIRTDQGPEFTGKALDQWAYQRDIKLKLIQPGKPTQNAFIESFNGKFRDECLN EHWFCSLAEARIRTAAWRRDYNEHRPHSAIGNLAPAEFAASWRTRQQQLKQEKLISTP GPTN" misc_feature <1068489..1069259 /locus_tag="PA0987" /note="IS3 family transposase; Region: transpos_IS3; NF033516" /db_xref="CDD:468052" protein_bind complement(1068671..1068683) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 1069044..1069056 /locus_tag="PA0987" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 1069089..1069101 /locus_tag="PA0987" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1069769..1070173 /locus_tag="PA0988" /db_xref="GeneID:878298" CDS 1069769..1070173 /locus_tag="PA0988" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249679.1" /db_xref="GeneID:878298" /translation="MPTPVFIKRTVLFGDCDPEGIVYTPRFSYFVLEAVQEALGVWLG GPGLRTLLGFRILPPARAFSLEFLHPVTWDDELTMQVGVSNVGTHSFSFSVEGRLSPD VVAFTASLTQVCVSPDTREVMEVPAQLRALLA" misc_feature 1069769..1070170 /locus_tag="PA0988" /note="Acyl-CoA thioesterase FadM [Lipid transport and metabolism]; Region: FadM; COG0824" /db_xref="CDD:440586" gene complement(1070294..1070854) /locus_tag="PA0989" /db_xref="GeneID:878301" CDS complement(1070294..1070854) /locus_tag="PA0989" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249680.1" /db_xref="GeneID:878301" /translation="MGKPFLHARRWLLPLTFICTATTAVAESTGDYWIVYGKGERYNN EVFVANATGILQQPKGIQSAQIIQLFEDRSMPTLTAYEVQFKCKERRVRFDNARAMRR IDNVITNVKTVDGWIDPEKYDYWLQRSFAFVCAPAIRDNNQMLPLGKMPIARMVQTVQ AMFVELQGVQAKKQTMRDLDAMLGNE" gene complement(1071239..1071877) /locus_tag="PA0990" /db_xref="GeneID:878492" CDS complement(1071239..1071877) /locus_tag="PA0990" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249681.1" /db_xref="GeneID:878492" /translation="MPSVSDPRALARLLELILSTAQAGLAFSKDRFDIGRFRALQHAV AEFIASDQGVAYERVENWIALDSHYPTPKLDVRALILDSQQRVLLVREASDSRWTLPG GWCDVNESPADAVVRETQEESGLEVRAIRLLALLDKHKHPHPPQLPHALKAFFFCHVT GGSLQQQTDETSAAEYFTVDALPPLSEHRVLASQIQTLWQRIHAETPEALFD" misc_feature complement(1071692..1071850) /locus_tag="PA0990" /note="Hydrolase of X-linked nucleoside diphosphate N terminal; Region: Nudix_N; pfam12535" /db_xref="CDD:432618" misc_feature complement(1071278..1071664) /locus_tag="PA0990" /note="CDP-Choline Pyrophosphatase and similar proteins; Region: NUDIX_CDP-Chase_like; cd04672" /db_xref="CDD:467556" gene 1073285..1073902 /gene="cupC1" /locus_tag="PA0992" /db_xref="GeneID:880617" CDS 1073285..1073902 /gene="cupC1" /locus_tag="PA0992" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="fimbrial subunit CupC1" /protein_id="NP_249683.1" /db_xref="GeneID:880617" /translation="MSISMKSILAAAVASLVVGNAMAADGTINFKGEITAAACSITGG AGTTVGGAAGNQTIDVSLGKISIDSLGGTAGGSIAGGTSLNLNLDCGKTGTGLTTVKL KFDPVSGTGIDSHNESLLKLGKDSTATGVGIGIYGSDGKLLNLSANETINAPLNSNTE KDGEGNDITVYSANLNLRAAYVKSGAAAATAGIANGSLPFTLEYN" misc_feature 1073297..1073833 /gene="cupC1" /locus_tag="PA0992" /note="Pilin (type 1 fimbrial protein) [Cell motility]; Region: FimA; COG3539" /db_xref="CDD:442760" gene 1073960..1074673 /gene="cupC2" /locus_tag="PA0993" /db_xref="GeneID:878234" CDS 1073960..1074673 /gene="cupC2" /locus_tag="PA0993" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="chaperone CupC2" /protein_id="NP_249684.1" /db_xref="GeneID:878234" /translation="MKYPFSSRVIWGGILLLFSTLANAGITLGGTRVVLQAPAKEAAI LVRNQASNDVMIQSWVEADNGADKREVPFVITPALSRLGGNKQQTLRILFQGEGLPSD RESVFRLNVQEIPQKSASANTLQIALRQRIKVFYRPDNLSGTSAEAPGKLNWRLVRQG GKSVVEVSNDTAFHVSFANVKLKAGNASYVVDADMVAPKSSRRFEVKGTPPGVSGNIE FQSVNDYGGLDKHSSSLSD" misc_feature 1073960..1074664 /gene="cupC2" /locus_tag="PA0993" /note="P pilus assembly protein, chaperone PapD [Extracellular structures]; Region: FimC; COG3121" /db_xref="CDD:442355" gene 1074784..1077303 /gene="cupC3" /locus_tag="PA0994" /db_xref="GeneID:879339" CDS 1074784..1077303 /gene="cupC3" /locus_tag="PA0994" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="usher CupC3" /protein_id="NP_249685.1" /db_xref="GeneID:879339" /translation="MAIFRKKFDFEVSVYSRSSCLVALGLALPAVTFAVEFNAEFLNN EGGAPVELKYFENGNSVSPGTYSVDIHLNQIMIRREDVVFSADSETGSVRPVIRVGLL KEIGVDIARLTRDKLIPANLENNTPLNVAELIPGASVEFDVNSLSLLVSIPQLYVQRH SRGYVDPSLWDDGVTALFSNYQANFTRNTNFGQNSDYRYLGLRNGFNLFGWRLRNDSS LSGGTGMRNKFSSNRTYVERDIRALKGTLSLGELYTSAQGDAFESVRMRGVQLQSDIG MLPDNEISYTPVVRGIAETNATVEVSQNGFVIYSTNVPPGAFEITDIYPSGSNGDLEV KIIEADGRQRSFKQSYSYLPVMTRKGNLRYGLAAGEYHNDGQPSVNLLQGSAVYGLSD RVTGFGGLLAAEKYNATNLGLGFNTPLGGLSADVTHSQSRTRRGGRNQGQSLRLLYSK TINATETSFTVVGYRYSTEGYRTLSQHIDDMSDESYLYGSSSSRQKSRIDLTVNQTLF RRSSLYLTAGETTYWNRPGSSRRVQFGFSSGIKRASYSLAVSRTQETGSFGRSDTQFT ASVSIPLGGSARSSQVYANAVSSQHGDSSLNTGISGYLDEANAFNYSAQANYSKDGGN SGSVGLGWDTSKAKLSANYSQGRDNKQINLGASGSVVVHPGGVTFGQPVGETFGLVEV PEVGGVGLDGYSSVRTDGRGYAVLPYMQPYRYNWVNLDTNTLGSDTEISDSTQMAVPT RGAVIAKRFSAESGRRVQFDLSMDSGGKIPFGAQAYDKEERVVGMVDNLSRLLVFGIE DQGRLSIRWSDGSCSVDYQLPPRNKDLTYERVALSCRRSSI" misc_feature 1074838..1077288 /gene="cupC3" /locus_tag="PA0994" /note="Outer membrane usher protein FimD/PapC [Cell motility, Extracellular structures]; Region: FimD; COG3188" /db_xref="CDD:442421" gene complement(1077383..1077904) /gene="ogt" /locus_tag="PA0995" /db_xref="GeneID:880794" CDS complement(1077383..1077904) /gene="ogt" /locus_tag="PA0995" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="methylated-DNA--protein-cysteine methyltransferase" /protein_id="NP_249686.1" /db_xref="GeneID:880794" /translation="MPHSYRKMESPVGTLTLVARDDAFLVAILWQHERPNRVPLDEMR LSEDSSLLAETERQLREYFSGKRSRFELPLDFQGTEFQKKVWSALLTIPFGETRSYTE IAVQIGSPNAVRAVGAANGRNPLSIVAPCHRVIGASGGLTGFAGGLAAKQWLLRLETR GRTPDLLSMIEDE" misc_feature complement(1077431..1077892) /gene="ogt" /locus_tag="PA0995" /note="DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase) [Replication, recombination and repair]; Region: AdaB; COG0350" /db_xref="CDD:440119" protein_bind 1078073..1078088 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA1000, PA0997, PA0996, PA0999, PA0998'" /bound_moiety="LasR" gene 1078462..1080015 /gene="pqsA" /locus_tag="PA0996" /db_xref="GeneID:880760" CDS 1078462..1080015 /gene="pqsA" /locus_tag="PA0996" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="anthranilate--CoA ligase" /protein_id="NP_249687.1" /db_xref="GeneID:880760" /translation="MSTLANLTEVLFRLDFDPDTAVYHYRGQTLSRLQCRTYILSQAS QLARLLKPGDRVVLALNDSPSLACLFLACIAVGAIPAVINPKSREQALADIAADCQAS LVVREADAPSLSGPLAPLTLRAAAGRPLLDDFSLDALVGPADLDWSAFHRQDPAAACF LQYTSGSTGAPKGVMHSLRNTLGFCRAFATELLALQAGDRLYSIPKMFFGYGMGNSLF FPWFSGASALLDDTWPSPERVLENLVAFRPRVLFGVPAIYASLRPQARELLSSVRLAF SAGSPLPRGEFEFWAAHGLEICDGIGATEVGHVFLANRPGQARADSTGLPLPGYECRL VDREGHTIEEAGRQGVLLVRGPGLSPGYWRASEEQQARFAGGWYRTGDLFERDESGAY RHCGREDDLFKVNGRWVVPTQVEQAICRHLPEVSEAVLVPTCRLHDGLRPTLFVTLAT PLDDNQILLAQRIDQHLAEQIPSHMLPSQLHVLPALPRNDNGKLARAELRHLADTLYH DNLPEERAC" misc_feature 1078516..1079961 /gene="pqsA" /locus_tag="PA0996" /note="Benzoate CoA ligase (BCL) and similar adenylate forming enzymes; Region: BCL_like; cd05919" /db_xref="CDD:341243" misc_feature order(1078609..1078611,1078615..1078617,1078621..1078626, 1078759..1078761,1078786..1078791,1079524..1079529, 1079533..1079535,1079548..1079559,1079569..1079571, 1079581..1079589) /gene="pqsA" /locus_tag="PA0996" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:341243" misc_feature order(1078942..1078944,1078951..1078968,1078972..1078977) /gene="pqsA" /locus_tag="PA0996" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341243" misc_feature order(1078951..1078953,1079074..1079079,1079086..1079094, 1079221..1079223,1079227..1079232,1079239..1079241, 1079293..1079298,1079356..1079373,1079383..1079388, 1079605..1079607,1079641..1079643,1079650..1079652, 1079674..1079685,1079881..1079883,1079938..1079940) /gene="pqsA" /locus_tag="PA0996" /note="putative active site [active]" /db_xref="CDD:341243" misc_feature order(1078951..1078953,1079293..1079298,1079356..1079373, 1079605..1079607,1079641..1079643,1079650..1079652, 1079683..1079685,1079938..1079940) /gene="pqsA" /locus_tag="PA0996" /note="putative AMP binding site [chemical binding]; other site" /db_xref="CDD:341243" misc_feature order(1079074..1079076,1079227..1079232,1079239..1079241, 1079293..1079295,1079674..1079682,1079863..1079865, 1079881..1079883) /gene="pqsA" /locus_tag="PA0996" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:341243" misc_feature order(1079086..1079094,1079293..1079298,1079365..1079373, 1079383..1079388,1079938..1079940) /gene="pqsA" /locus_tag="PA0996" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:341243" gene 1080009..1080860 /gene="pqsB" /locus_tag="PA0997" /db_xref="GeneID:883098" CDS 1080009..1080860 /gene="pqsB" /locus_tag="PA0997" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249688.1" /db_xref="GeneID:883098" /translation="MLIQAVGVNLPPSYVCLEGPLGGERPRAQGDEMLMQRLLPAVRE ALDEAAVKPEEIDLIVGLALSPDHLIENRDIMAPKIGHPLQKVLGANRAHVFDLTDSS LARALYVVDTLASDQGYRNVLVVRGESSQGLEVDSESGFALADGALALLCRPTGKAAF RRGALGGDPAQEWLPLSIPLNTDIRQVGDVKGHLNLPAQPGLPEAVRAGFTRLAGDFP QLNWVREEWFGQGRPDGRCLGPFELASQLRAAQRDRLDELLLISFDPFGMVVEGVTLE LAGEAHA" misc_feature 1080129..>1080392 /gene="pqsB" /locus_tag="PA0997" /note="3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; Region: FabH; COG0332" /db_xref="CDD:440101" gene 1080853..1081899 /gene="pqsC" /locus_tag="PA0998" /db_xref="GeneID:880660" CDS 1080853..1081899 /gene="pqsC" /locus_tag="PA0998" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249689.1" /db_xref="GeneID:880660" /translation="MHKVKLAAITCELPARSYENDDPVFAAVPDLSESWWQFWGVNRR GYFDPRNGENEFSLVVRAAERLLRSSDTAPDSVDMLICSASSPIMTDAGDVLPDLRGR LYPRMANVLSKQLGLSRALPLDSQMECASFLLNLRLAASMIRQGKAEKVLVVCSEYIS NLLDFTSRTSTLFADGCAVALLTRGDDDSCDLLASAEHSDATFYEVATGRWRLPENPT GEAKPRLYFSLFSDGQNKMASFVPTNVPIAMRRALEKAGLGSDDIDYFVFHQPAPFLV KAWAEGIGARPEQYQLTMGDTGVMISVSIPYTLMTGLREGKIRPGDRIVMAGAATGWG FAAQVWQLGEVLVC" misc_feature 1080856..1081878 /gene="pqsC" /locus_tag="PA0998" /note="3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; Region: FabH; COG0332" /db_xref="CDD:440101" gene 1081942..1082955 /gene="pqsD" /locus_tag="PA0999" /db_xref="GeneID:880625" CDS 1081942..1082955 /gene="pqsD" /locus_tag="PA0999" /EC_number="2.3.1.180" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="3-oxoacyl-ACP synthase" /protein_id="NP_249690.1" /db_xref="GeneID:880625" /translation="MGNPILAGLGFSLPKRQVSNHDLVGRINTSDEFIVERTGVRTRY HVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR HIPVLDIRAQCSGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMDCSDRGRNLSILL GDGAGAVVVSAGESLEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGE FLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLGIPQ HKFAVTVDRLGNMASASTPVTLAMFWPDIQPGQRVLVLTYGSGATWGAALYRKPEEVN RPC" misc_feature 1081942..1082931 /gene="pqsD" /locus_tag="PA0999" /note="3-oxoacyl-(acyl carrier protein) synthase III; Reviewed; Region: PRK12879" /db_xref="CDD:237245" gene 1082949..1083854 /gene="pqsE" /locus_tag="PA1000" /db_xref="GeneID:880721" CDS 1082949..1083854 /gene="pqsE" /locus_tag="PA1000" /experiment="DESCRIPTION:Gene Expression; mutation analysis; protein purification and characterization[PMID:25960261]" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="thioesterase PqsE" /protein_id="NP_249691.1" /db_xref="GeneID:880721" /translation="MLRLSAPGQLDDDLCLLGDVQVPVFLLRLGEASWALVEGGISRD AELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAWKS ESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHS DDHVVFYDVRRRRLFCGDALGEFDEAEGVWRPLVFDDMEAYLESLERLQRLPTLLQLI PGHGGLLRGRLAADGAESAYTECLRLCRRLLWRQSMGESLDELSEELHRAWGGQSVDF LPGELHLGSMRRMLEILSRQALPLD" misc_feature 1083009..1083641 /gene="pqsE" /locus_tag="PA1000" /note="uncharacterized Thermus thermophilus TTHA1429 and related proteins; MBL-fold metallo hydrolase domain; Region: TTHA1429-like_MBL-fold; cd07725" /db_xref="CDD:293811" misc_feature order(1083153..1083155,1083159..1083161,1083165..1083170, 1083423..1083428,1083480..1083482,1083609..1083611) /gene="pqsE" /locus_tag="PA1000" /note="active site" /db_xref="CDD:293811" gene 1083972..1085564 /gene="phnA" /locus_tag="PA1001" /db_xref="GeneID:878421" CDS 1083972..1085564 /gene="phnA" /locus_tag="PA1001" /EC_number="4.1.3.27" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="anthranilate synthase component I" /protein_id="NP_249692.1" /db_xref="GeneID:878421" /translation="MGARRWLVSGVGYRLEESLEYRTLVPEALSIWRMAGANRMLFDC FDVDSKAARRSVAILSSCLRIECWGRDVVLRALNSNGRALLAPLSEDCPAQVTCLRDG DTLHWRFPQEESHADEWRRLHGLSSLEALRRVLGTLGDAEGPVLLGGLFSFDLAEQFE PLPAPAEPARHCPDYLFLVPELLLDIDHLARRTSLQAFVHDPAGHDRLAASLRQCADE FHGAVEEASESPVAGVRAGNYQVDLDDASFARQVERLQAHVRAGDVFQIVPSRSFSMP CADPWRAYRQLCLRNPSPYRFFLDAGDFCLFGASPESALKYDAESREVELYPIAGTRP RGRDARGAIDAELDNRLEAELRLDAKEIAEHMMLVDLARNDLARVCRSGTRQVRDMLK VDRYSHVMHLVSRVAGELHGELDALHAYRACLNMGTLVGAPKVRAMQLLRQYEDGYRG SYGGAIGILDSAGNLDTSIVIRSAEVREGIARVRAGAGVVLDSDPRLEAEETRNKALA VLTAVAAAERERGERDAHHAVG" misc_feature 1083972..1085486 /gene="phnA" /locus_tag="PA1001" /note="anthranilate synthase component 1; Region: PRK13564" /db_xref="CDD:237428" gene 1085542..1086144 /gene="phnB" /locus_tag="PA1002" /db_xref="GeneID:880689" CDS 1085542..1086144 /gene="phnB" /locus_tag="PA1002" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="anthranilate synthase component II" /protein_id="NP_249693.1" /db_xref="GeneID:880689" /translation="MRITLLDNFDSFTYNLVEQFCLLGAEVRVMRNDTPLPTIQAALL ADGCELLVLSPGPGRPEDAGCMLELLAWARGRLPVLGVCLGHQALALAAGGAVGEARK PLHGKSTSLRFDQRHPLFDGIADLRVARYHSLVVSRLPEGFDCLADADGEIMAMADPR NRQLGLQFHPESILTTHGQRLLENALLWCGALAVRERLRA" misc_feature 1085548..1086111 /gene="phnB" /locus_tag="PA1002" /note="anthranilate synthase component II; Provisional; Region: PRK05670" /db_xref="CDD:235552" misc_feature order(1085704..1085709,1085713..1085715,1085788..1085793, 1085800..1085802,1085932..1085943) /gene="phnB" /locus_tag="PA1002" /note="glutamine binding [chemical binding]; other site" /db_xref="CDD:153214" misc_feature order(1085788..1085790,1086046..1086048,1086052..1086054) /gene="phnB" /locus_tag="PA1002" /note="catalytic triad [active]" /db_xref="CDD:153214" gene complement(1086097..1087095) /gene="mvfR" /locus_tag="PA1003" /db_xref="GeneID:879994" CDS complement(1086097..1087095) /gene="mvfR" /locus_tag="PA1003" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator MvfR" /protein_id="NP_249694.1" /db_xref="GeneID:879994" /translation="MPIHNLNHVNMFLQVIASGSISSAARILRKSHTAVSSAVSNLEI DLCVELVRRDGYKVEPTEQALRLIPYMRSLLNYQQLIGDIAFNLNKGPRNLRVLLDTA IPPSFCDTVSSVLLDDFNMVSLIRTSPADSLATIKQDNAEIDIAITIDEELKISRFNQ CVLGYTKAFVVAHPQHPLCNASLHSIASLANYRQISLGSRSGQHSNLLRPVSDKVLFV ENFDDMLRLVEAGVGWGIAPHYFVEERLRNGTLAVLSELYEPGGIDTKVYCYYNTALE SERSFLRFLESARQRLRELGRQRFDDAPAWQPSIVETAQRRSGPKALAYRQRAAPE" misc_feature complement(1086214..1087083) /gene="mvfR" /locus_tag="PA1003" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" protein_bind complement(1087614..1087629) /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA1003" /bound_moiety="LasR" gene 1087843..1088901 /gene="nadA" /locus_tag="PA1004" /db_xref="GeneID:883095" CDS 1087843..1088901 /gene="nadA" /locus_tag="PA1004" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="quinolinate synthetase" /protein_id="NP_249695.1" /db_xref="GeneID:883095" /translation="MTHISERLLVQAHLAAKQPRVLSEQESAEHRAAIAAELKAQNAV LVAHYYCDPVIQALAEETGGCVSDSLEMARFGNQHPAQTVVVAGVRFMGETAKILNPE KRVLMPTLEATCSLDLGCPVDEFSAFCDQHPERTVVVYANTSAAVKARADWVVTSSCA VEIVEHLMDNGEPILWAPDQHLGRYIQRETGADMLLWDGACIVHEEFKAKQLEDMKAL YPDAAILVHPESPESVVALADAVGSTSQLIKAAQTLPNKTFIVATDRGIFYKMQQLCP DKDFIEAPTAGNGAACRSCAHCPWMAMNTLERTLACLREGSGEIFVDPALIPRAVRPL KRMLDFTQAARLRQAGNA" misc_feature 1087873..1088868 /gene="nadA" /locus_tag="PA1004" /note="quinolinate synthase NadA; Region: PRK09375" /db_xref="CDD:236489" gene complement(1089010..1090443) /locus_tag="PA1005" /db_xref="GeneID:882996" CDS complement(1089010..1090443) /locus_tag="PA1005" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249696.1" /db_xref="GeneID:882996" /translation="MNVLRPALLTLACMLASPVMSDDLPSLGDASSSIVSPEQEFQLG RAWLSMLRNQVDAISDPQLKDFVESSVYRLAETSDLQDHRLAFILIRDAQINAFAAPG GVIGVNGGLLLNAQTEGEYAAVLAHELGHLIQRHFARGIEAQQRMQLPVMAAMLAGIV AAAAGAGDAGIAAIAGTQAAAIQNQLRFSRQNEQEADRVGVTNMVRAGYDPRSMPNMF ERLARQYRYDGKPPEFLLTHPVTESRIADTRNRAEQYPQGGKEDSLRYQQMRARTQLL FEETPGMAGKRFRAMLNDNPKLDAARYGLAISQTRIGQLNDARDNLRQLLAKAPNDVA YNLAQVELDITANRLPDADQRLKKMLAQFPSSYPLKQVRADLMLKMGKPQESEKILDD LSKARPLDPDVWNRLAEVRSLTNNAIGVHQARAEYLSLTGDYQAAIEQLDFAKRRAGG NFQLAARLDARQQEIRQQEKMVKEMFR" misc_feature complement(1089694..1090245) /locus_tag="PA1005" /note="Oma1 peptidase-like, integral membrane metallopeptidase; Region: M48C_Oma1-like; cd07324" /db_xref="CDD:320683" misc_feature complement(order(1089730..1089732,1089853..1089855, 1089865..1089867,1090051..1090053,1090060..1090065)) /locus_tag="PA1005" /note="putative active site [active]" /db_xref="CDD:320683" misc_feature complement(order(1089730..1089732,1089865..1089867, 1090051..1090053,1090063..1090065)) /locus_tag="PA1005" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:320683" misc_feature complement(1089142..1089546) /locus_tag="PA1005" /note="Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: BepA; COG4783" /db_xref="CDD:443813" misc_feature complement(order(1089154..1089156,1089214..1089219, 1089226..1089231,1089238..1089240,1089307..1089312, 1089316..1089321,1089328..1089333,1089340..1089342, 1089418..1089420,1089424..1089429,1089436..1089441, 1089448..1089450)) /locus_tag="PA1005" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature complement(1089361..1089450) /locus_tag="PA1005" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(1089256..1089348) /locus_tag="PA1005" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(1089106..1089243) /locus_tag="PA1005" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" gene 1090606..1090857 /locus_tag="PA1006" /db_xref="GeneID:879448" CDS 1090606..1090857 /locus_tag="PA1006" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249697.1" /db_xref="GeneID:879448" /translation="MTDNDSSPLVCDAELDASGLNCPLPLLKAKLELNRLPSGGVLKV IATDAGSQRDFRAFAQLAGHELLREEAAEGVYRYWLRKR" misc_feature 1090648..1090854 /locus_tag="PA1006" /note="Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis) [Translation, ribosomal structure and biogenesis, Coenzyme transport and metabolism, Posttranslational modification, protein turnover, chaperones]; Region: TusA; COG0425" /db_xref="CDD:440194" gene 1090891..1091964 /locus_tag="PA1007" /db_xref="GeneID:882993" CDS 1090891..1091964 /locus_tag="PA1007" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249698.1" /db_xref="GeneID:882993" /translation="MIKVLRDWMQRYFSDEEAVVLAIMLVLGFSVILAFGGMLAPVLA AMVIAFLIQGVVGMLERFRVPHLFAVWLVYSLFLGLLALFLVVLLPLLWQQLFTLFNE LPRMLGEWQSVLLMLPERYPSLISEEQVLKAIETARGEFGQIGQWALTSSLASLPVVV NVMIYLVLVPILVFFFLKDKKRFHTWFHRYLPRERGLMKQVWAEMNQQIANYIRGKVI EIVITGAVTYIAFAYLGLNYAALLALLVGLSVVVPYIGAVVVSVPVAMIAFFQWGWSD QFIYLMVAHAIIQALDGNVLVPLLFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPL ATLVKAVLDAWPKDLPETPAATR" misc_feature 1090942..1091961 /locus_tag="PA1007" /note="Predicted PurR-regulated permease PerM [General function prediction only]; Region: PerM; COG0628" /db_xref="CDD:440393" gene complement(1092025..1092498) /gene="bcp" /locus_tag="PA1008" /db_xref="GeneID:878040" CDS complement(1092025..1092498) /gene="bcp" /locus_tag="PA1008" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bacterioferritin comigratory protein" /protein_id="NP_249699.1" /db_xref="GeneID:878040" /translation="MPVAIDKPVPDFTAPATSGKEVTLSALKGKQVVLYFYPKDSTPG CTTEGQGFRDQYAAFQKANTEVFGISRDGLKSHENFKCKQEFPFELISDKDEAVCQLF DVIKLKKLYGKEYMGVDRSTFLIDRDGVLRQEWRGVKVPGHVDAVLAAAQALNGA" misc_feature complement(1092052..1092480) /gene="bcp" /locus_tag="PA1008" /note="Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing...; Region: PRX_BCP; cd03017" /db_xref="CDD:239315" misc_feature complement(order(1092139..1092141,1092364..1092366, 1092373..1092375)) /gene="bcp" /locus_tag="PA1008" /note="catalytic triad [active]" /db_xref="CDD:239315" gene complement(1092510..1093067) /locus_tag="PA1009" /db_xref="GeneID:879264" CDS complement(1092510..1093067) /locus_tag="PA1009" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249700.1" /db_xref="GeneID:879264" /translation="MSTSQPREQFLLISALGPNPMELTTLLCRACVESRCAVVSSRLT RHGEFSALVLQISGSWDALARLEGSLPALTKRGDITLSMTRSNAHVTRAQALPYVAYV SAVYRPDILNELCQFFIDHNIELENLTCDTYQAPHTNTTMLNATITVTLPAGTQISWL RDQFLDFADALNLDALIEPWRPQHP" misc_feature complement(1092525..1093046) /locus_tag="PA1009" /note="Glycine cleavage system regulator GcvR [Amino acid transport and metabolism]; Region: GcvR; COG2716" /db_xref="CDD:442029" gene 1093251..1094129 /gene="dapA" /locus_tag="PA1010" /db_xref="GeneID:879525" CDS 1093251..1094129 /gene="dapA" /locus_tag="PA1010" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="4-hydroxy-tetrahydrodipicolinate synthase" /protein_id="NP_249701.1" /db_xref="GeneID:879525" /translation="MIAGSMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGT TGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLL VTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPNIIGI KEATGDLQRAKEVIERVGKDFLVYSGDDATAVELMLLGGKGNISVTANVAPRAMSDLC AAAMRGDAAAARAINDRLMPLHKALFIESNPIPVKWALHEMGLIPEGIRLPLTWLSPR CHEPLRQAMRQTGVLA" misc_feature 1093260..1094105 /gene="dapA" /locus_tag="PA1010" /note="Dihydrodipicolinate synthase (DHDPS); Region: DHDPS; cd00950" /db_xref="CDD:188637" misc_feature order(1093377..1093391,1093488..1093490,1093494..1093496, 1093563..1093571,1093656..1093658,1093662..1093664, 1093992..1093997,1094049..1094051,1094055..1094057) /gene="dapA" /locus_tag="PA1010" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:188637" misc_feature order(1093380..1093385,1093647..1093649,1093662..1093664, 1093731..1093733,1093806..1093808,1093812..1093814) /gene="dapA" /locus_tag="PA1010" /note="active site" /db_xref="CDD:188637" misc_feature 1093731..1093733 /gene="dapA" /locus_tag="PA1010" /note="catalytic residue [active]" /db_xref="CDD:188637" gene 1094147..1095337 /locus_tag="PA1011" /db_xref="GeneID:879282" CDS 1094147..1095337 /locus_tag="PA1011" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249702.1" /db_xref="GeneID:879282" /translation="MKRLAGLTALALVIGNTSGCGWLWGPEGYFRDRGDDYLGARETP PMQLPEGVHSKPLDPLLPIPLNVATTHEKEGEYEVPRPQPLANAGDISDYSLQRSGDS RWVVAQRPPAEVWPVARQFFEENGFRIADERPQTGEFSSDWQSLSQLSAPLARRLSSR VSGVEPDGQARVRVRIEPGVQSNTSEVYVLSQTRAAGDTSSPSWPSKSVAPSLDAALL DEMVASMARSAEQGGSVSLLAANSIYDTPGTFELSKDGSGNPVLTLQSDFDRSWVSVG RALDNADIRVDDLNRSLGVYYVNIAEGAKKPDEDKPGFFSRLFGGGEKTKEEEDAKAQ RYQVRLTTVSDAVQVTVDKDINTSAPADVAQNVLEKLQESMRNAVRGSGQRKPGQFGL GEQF" misc_feature 1094150..1095274 /locus_tag="PA1011" /note="Outer membrane beta-barrel protein assembly factor BamC [Cell wall/membrane/envelope biogenesis]; Region: BamC; COG3317" /db_xref="CDD:442546" gene 1095276..1096034 /locus_tag="PA1012" /db_xref="GeneID:883077" CDS 1095276..1096034 /locus_tag="PA1012" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249703.1" /db_xref="GeneID:883077" /translation="MRFAVLGSGSRGNSALVSSSDTRILIDCGFPLREIIKRLARLGL SPAQLDAILVTHEHADHIHGVELLARHYQIPVYLSAGTLSGMRRPVHPVELLRAGQRL AIRGLEVQVVGVSHDAREPTQFVLSDGQRRFGMLTDLGVATAEVLECYRAVDALVVEA NHDSTMLAGGPYPYFLKARVGGSRGHLNNHQSAELVKQLDWGRMQHLVLAHLSEKNNS PQLARQTFVDTLGCDPGWLQVADQHSGLDWREIA" misc_feature 1095285..1095692 /locus_tag="PA1012" /note="uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain; Region: YycJ-like_MBL-fold; cd07733" /db_xref="CDD:293819" misc_feature order(1095441..1095443,1095447..1095449,1095453..1095458, 1095621..1095626,1095687..1095689) /locus_tag="PA1012" /note="putative active site [active]" /db_xref="CDD:293819" gene 1096063..1096773 /gene="purC" /locus_tag="PA1013" /db_xref="GeneID:881642" CDS 1096063..1096773 /gene="purC" /locus_tag="PA1013" /EC_number="6.3.2.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole-succinocarboxamide synthase" /protein_id="NP_249704.1" /db_xref="GeneID:881642" /translation="MEKREELYRGKAKSVYQTDDADRLILLFRNDTSAFDGKRIEQLD RKGAVNNKFNAFIMQKLEAAGIPTQFDKLLSDTECLVKKLDMIPVECVVRNFAAGSLV RRLGVEEGIALTPPTFELFLKNDALGDPFINESHVQAFGWATPEQLAQMKTYSFKVNE VLNKLFDDAGLLLVDFKLEFGLFHGQIVLGDEFSPDGCRLWDKETRKKMDKDRFRQGL GDVIEAYEEVAKRLGVPL" misc_feature 1096063..1096770 /gene="purC" /locus_tag="PA1013" /note="phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed; Region: PRK09362" /db_xref="CDD:181800" misc_feature order(1096081..1096086,1096090..1096095,1096099..1096101, 1096105..1096110,1096132..1096134,1096138..1096140, 1096267..1096269,1096306..1096308,1096312..1096314, 1096318..1096320,1096429..1096431,1096597..1096599, 1096630..1096635) /gene="purC" /locus_tag="PA1013" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:133470" misc_feature order(1096084..1096086,1096090..1096101,1096105..1096107, 1096132..1096134,1096168..1096170,1096270..1096272, 1096303..1096314,1096318..1096320,1096330..1096332, 1096336..1096338,1096342..1096344,1096354..1096362, 1096423..1096425,1096429..1096431,1096447..1096449, 1096585..1096593,1096597..1096599,1096633..1096635, 1096648..1096659) /gene="purC" /locus_tag="PA1013" /note="active site" /db_xref="CDD:133470" misc_feature order(1096168..1096170,1096330..1096332,1096336..1096338, 1096342..1096344,1096354..1096362,1096423..1096425, 1096447..1096449,1096585..1096593,1096648..1096659) /gene="purC" /locus_tag="PA1013" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133470" gene 1096867..1096956 /locus_tag="PA1013.1" /db_xref="GeneID:3240280" tRNA 1096867..1096956 /locus_tag="PA1013.1" /product="tRNA-Ser" /db_xref="GeneID:3240280" gene 1097296..1098288 /locus_tag="PA1014" /db_xref="GeneID:883119" CDS 1097296..1098288 /locus_tag="PA1014" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycosyl transferase family protein" /protein_id="NP_249705.1" /db_xref="GeneID:883119" /translation="MWPSCMARFPSDGQPGYRFVPSPGSGAGEEEMRPLVSVVCACFN ISKYLDEAIASIYAQGYPNLELIVVDDGSTDDTYERLAMLRERHGFQLYRQANRGVSD ALNHGLRHARGEFVMTPDLDDILLPGALDTRVDYLLAHPEVGCVGGFNICIDSAGNEV ARDGFSEGCVERWGFDAALAETLVVMPLTALYRMEAMKRADFFDPSIRVQDFQITLRI AAQGYEIHRLPAYMGRYRRHGSGLSGRYKLNYEADMQAIEPYRAHPNYRRARQLILNK ALKKAVVQDGRYAWQLFRSVPLRAWDRVTLKRFWRFLRYLPVLGLKGGTGVEGR" misc_feature 1097392..1098045 /locus_tag="PA1014" /note="Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; Region: WcaA; COG0463" /db_xref="CDD:440231" gene complement(1098328..1099128) /locus_tag="PA1015" /db_xref="GeneID:878036" CDS complement(1098328..1099128) /locus_tag="PA1015" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249706.1" /db_xref="GeneID:878036" /translation="MTKDATTKGTSSKDVGAVVNAIQILRHLAHADGPQGVAAIARAT GISPSSAFNILRTLSNERLTSFDDAGKTYQLGLGLSELAVGFVGRSYADLIQPELERL SLAHHILIALWQVTDDAHIRVIALAAPPVAHVNVAVGTRLPELVGAAGRCIAGLRELP EDELRRRLTRVRWENPPSFERYQAEATEAVERGWAIDQEHLYRGVSMVASAITDRDGQ PRFAISAIGISAQHQPDDLERIGTSLRDTARFVSRALFPQGEALKEKS" misc_feature complement(1098364..1099086) /locus_tag="PA1015" /note="DNA-binding transcriptional regulator, IclR family [Transcription]; Region: IclR; COG1414" /db_xref="CDD:441024" gene 1099669..1100820 /locus_tag="PA1016" /db_xref="GeneID:879534" CDS 1099669..1100820 /locus_tag="PA1016" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="thiolase" /protein_id="NP_249707.1" /db_xref="GeneID:879534" /translation="MSAAIRGKTAIVGIGSAGVGEAPGYSAIELLGQASLKAIADAGL KLSDIDAIFAATSSHAFPTLSVAEYLGIRPKFVDGTNIGGSSFELHLLQATLALEAGL CDAALICYGSNQRTAGGRLVSMSEPQWHETPYKPRHPITAYALAASRHMHQYGTTREQ LAEVAVSARQWANLNPEAFARGPLSVDDVLAARMVSDPLSAADCCLVTDGGGACVVVR AERARDLPNAPVYFLGAAGAQWHRSIVSMPDLTVTAASESAPRAMQMAGVRHADIDLV MLYDAFTINTLLFLEDLGFCAKGEGGPFVQGGRIAPGGELAVNTNGGGLSCVHPGMYG MFLIIEAVTQLRRQAGERQLAKADVALLHGNGGTLSSQVTALLGTGDTL" misc_feature 1099669..1100817 /locus_tag="PA1016" /note="thiolase; Provisional; Region: PRK06158" /db_xref="CDD:180434" gene 1100930..1103077 /gene="pauA" /locus_tag="PA1017" /db_xref="GeneID:879355" CDS 1100930..1103077 /gene="pauA" /locus_tag="PA1017" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="pimeloyl-CoA synthetase" /protein_id="NP_249708.1" /db_xref="GeneID:879355" /translation="MSANHSQQLIDAPRFASLTPLIEPRSVAVIGASSDPTRIGGRPI AYMLRHGYAGQILPVNPNRAEIQGLPAFASVAELPQAPDVAIVAVPAPQVLETVRALG RQGARSAIVFSSGFSEVGEAGAAMQDAVVAAAREHGMRLLGPNALGAFNSNLGYYAFF STSLERGVPLPGRVGIATQSGAYGAHLLGMARQRRLGTPICVATGNEADVTLGDSIGW LVESPEIDVVMAYAESIRNVDSFLAALEAAHRAGKPVILHKVGRSALGSRAALSHTAS LAGDDKVLDAVLGDYAVIRARTTEELMDIAYLATRRIYPVGNSLGMITVSGGAGIIVS DVAEEVGLPMPPMPDMAQERLKARLSFASPINPVDCTAQALNDLTLVRDFTESMVVDG GYRSLLAFFTQAGTAASIGARLAEQFRRIKEAHPERLFVVSVMGEGEELAPYEEAGFA LFEDPTRAVVAIQAMGRLGEAFARPLRLRRPAGGLQLPASTPGEAEAKRLLARAGIES AAEAVLGSAEEAVAFAEGIGYPVVLKLASADIQHKSEIGGVLLGVSDADAVRAGFQLL LRRAAEKAPQARLDGVLVARQLQGGVECFMGIQRDPLFGPVALFGLGGIFVEVLQDVV FRRCPFEVDEAEAMIRSIRGAPLLFGARGRPRADVAALARLLSNLSRFAWEAGERLRS VDLNPVIALPEGQGAWAVDAVLEVEEVADGARS" misc_feature 1100972..1103068 /gene="pauA" /locus_tag="PA1017" /note="Acyl-CoA synthetase (NDP forming) [Energy production and conversion]; Region: PatZN; COG1042" /db_xref="CDD:440664" gene 1103061..1103927 /locus_tag="PA1018" /db_xref="GeneID:879492" CDS 1103061..1103927 /locus_tag="PA1018" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249709.1" /db_xref="GeneID:879492" /translation="MALDPEVLLNYPIPEVRQRYSRRDSAFYALSLGLGGDPLDERQL AYVDPCRDLQALPCMALVLGHPGFWLGNPATGVDALRLVHGEQRLEWRRPLPAEGEVI GRTRVTGLVDKGADKGALLYSEKVLSDALSGEVLAVARSTTFLRGDGGFGGSRQVPET PHRLPERTPDLRLDLPTRPEQALYYRLNGDDNPLHAEPAAALRAGFPRPILHGLCTLG VAFHAVLRGLADYRAGQLGHLQVRFSAPVFPGETLRTEMWSDGSFRTRVVERDVVVLD NGRVGPPPERPD" misc_feature 1103064..1103885 /locus_tag="PA1018" /note="enoyl-CoA hydratase; Region: PLN02864" /db_xref="CDD:178455" gene 1104009..1105364 /gene="mucK" /locus_tag="PA1019" /db_xref="GeneID:879387" CDS 1104009..1105364 /gene="mucK" /locus_tag="PA1019" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cis,cis-muconate transporter MucK" /protein_id="NP_249710.1" /db_xref="GeneID:879387" /translation="MNATALSPNPAPAISRRTMLIAFVFCFLGLLADGVDLMFLAYSL NSLKAEFGLSNFEAGSLGSLTLAGMAVGGIYGGWCCDRFGRVRVVTWTIVLFSIGTAL LGLTQNYWQFALIRFVASLGLGSLFVACNILMSECVGTRYRTTILAAMQAGWTVGYLV ATLLAGQIIPEFGWRTLFFTAVAPALVCLALRPWVPESPSWLAAQAGRQRPGAAPQSH AEAGGAGPLGRMLGDPETRGMFLLWSLTSCFLLFGYYGTNNWMPSYLESELGMNFKSM TGYMVGTYSAMILGKVAAGVCADLFGRRLTFAAGAIGSAAFMPLIVFYHSPSNILWIL ITFGFIYGVPVGVLATYMTESFSTRVRGSAVGTAYNLGRIGAAVAPAGIGLLATHVSI GAGFLVMGITYVLTGLIPALFIADRLYDPNRESRDAESASRRQAPGSAVDTAERRAAK A" misc_feature 1104075..1105259 /gene="mucK" /locus_tag="PA1019" /note="Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; Region: MFS_MucK; cd17371" /db_xref="CDD:340929" misc_feature order(1104105..1104110,1104117..1104122,1104129..1104131, 1104225..1104227,1104375..1104380,1104384..1104392, 1104399..1104401,1104459..1104461,1104468..1104473, 1104480..1104482,1104747..1104749,1104756..1104761, 1104768..1104776,1104783..1104785,1104867..1104869, 1104879..1104881,1105026..1105031,1105041..1105043, 1105053..1105055,1105101..1105103,1105110..1105115, 1105122..1105127,1105134..1105136) /gene="mucK" /locus_tag="PA1019" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340929" gene 1105388..1105795 /locus_tag="PA1019a" /db_xref="GeneID:17373346" CDS 1105388..1105795 /locus_tag="PA1019a" /codon_start=1 /transl_table=11 /product="thioesterase" /protein_id="YP_008719738.1" /db_xref="GeneID:17373346" /translation="MSSFPRQPAAEQRPASFQEFIGLERWTDADGVARVRLGHRPELM NYLQQFHGGVLMSVLDAAMAQAIRACLPDCSMVTIDMATHFMGSARGELRAVDRVVRR TRTICFCTAEICNENGEVIAMASGSFRYRAAKP" misc_feature 1105388..1105792 /locus_tag="PA1019a" /note="Acyl-CoA thioesterase PaaI, contains HGG motif [Secondary metabolites biosynthesis, transport and catabolism]; Region: PaaI; COG2050" /db_xref="CDD:441653" gene 1105888..1107000 /locus_tag="PA1020" /db_xref="GeneID:877573" CDS 1105888..1107000 /locus_tag="PA1020" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_249711.1" /db_xref="GeneID:877573" /translation="MQMTDGRSAYRQEGEQMSEQDEWAGEREQRLRMIRDSAASLVPR DGDLSRVRRGRFTGSGVDRQAWREVCAMGWPALRLDEALGGSGLGMSEYAALLEALGR GLLPEPLIEAGLVAPLLPEDERVALLAAERLVLPVGIAYRDGRRRPRMQEGRLHGEVA HVHLAGAADAWLVACEQGLALVERDADGVELLCEATQDGAHLARLLFRDAPARWLSGE VTEQVLDEAGLACAAYLVGLMDGAFERTLEYLKVRRQFGREIGSFQALQHRMVDLRIQ IELSRAMVEQAAAAIDAGASESERQRQVSSARVRASEAALLVTRQAIQLHGGIGYTDE ADIGLFLRRAMVLLNAHGSLAFHKARYAALLQREVA" misc_feature 1105981..1106991 /locus_tag="PA1020" /note="Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]; Region: CaiA; COG1960" /db_xref="CDD:441563" gene 1107000..1107761 /locus_tag="PA1021" /db_xref="GeneID:877570" CDS 1107000..1107761 /locus_tag="PA1021" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="NP_249712.1" /db_xref="GeneID:877570" /translation="MSGLLQETRGTVRLLRFDNPARRNALSPALRMELLRALEAAECD PSIRSVLLTGGEEVFCAGGDLGDMRVTELAAGRARMQDNARLVRQMVRMGKPLIAAVE GWAVGAGLSVALACDSIVCGAGARFAAGFGKVGLLADLGQLHTLPARIGWGRARQILM FGQVVEAEEALRIGLADRLCAAGGALAMALELAGRVEQQAPLPLAMTKALLAEGLDLL LEREGELQSQLFLSADHAEGKAAFLAKRPPVFRGN" misc_feature 1107009..1107740 /locus_tag="PA1021" /note="Enoyl-CoA hydratase/carnithine racemase [Lipid transport and metabolism]; Region: CaiD; COG1024" /db_xref="CDD:440647" gene 1107763..1108908 /locus_tag="PA1022" /db_xref="GeneID:880602" CDS 1107763..1108908 /locus_tag="PA1022" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_249713.1" /db_xref="GeneID:880602" /translation="MTDYDSLDDNAFRLMVREWIAANYPQRIRNPPRRLGREETREWY LLLSRQGWLCPGWPREYGGMGLSAGKQLIMMEEMEEYGCARLPDSGVTMLGPLLIRYG DEAQRARFLPRILSGEDIWCQGYSEPNAGSDLASLRTEARLENGEWVINGQKTWTTMG SEANWIFLLVRTERSAKAQHGISFLLVPMDSLGIEVRPILNLELHGEFCEVFFNDVRV PYDSLVGEINQGWSMAKALLGFERIFLGSPKQSTFALQRLERLARHLGLWHDPLFARR FAALSMDLDSHKALYERFAERLRRGESLGPEVSMLKIFQSELFQRISELGLEIAGEDS ALLQPFAEDPELHPAGIFIQSRPTTIYGGSNEIQRNILAKSVLGLPG" misc_feature 1107784..1108896 /locus_tag="PA1022" /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933" /db_xref="CDD:447864" misc_feature order(1108039..1108041,1108129..1108131,1108135..1108137, 1108228..1108230,1108234..1108236,1108840..1108848, 1108852..1108854,1108858..1108860) /locus_tag="PA1022" /note="active site" /db_xref="CDD:173838" gene 1108949..1109866 /locus_tag="PA1023" /db_xref="GeneID:878431" CDS 1108949..1109866 /locus_tag="PA1023" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_249714.1" /db_xref="GeneID:878431" /translation="MSSRLNEGKVAIVTGAGGGIGREIALALADSGARVVINDIGVSL QGEGGSASPAEETLGLIRQRGGEGLINTDSVADWDSARRIVECAMDGFGRLDIVVNNA GILRDAIFHKMSADDWLSVINVHLNGSFFVSRAAAERFRTQQAGAFVHMTSTSGLIGN FGQANYSAAKLGIVALSKSIALDMQRYNVRSNCIAPFAWSRMTDSIPAETPEQKARVD KLQRMTPEKNAPLAVYLASDAAREVTGQVFAARHHELFLMSQSRPLRSVHSEHGWTPE SIAEHGMPALRGSFMDLARSPDVFSWDPI" misc_feature 1108970..1109692 /locus_tag="PA1023" /note="A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous...; Region: Rossmann-fold NAD(P)(+)-binding proteins; cl21454" /db_xref="CDD:473865" misc_feature order(1108991..1108993,1108997..1109002,1109006..1109008, 1109063..1109071,1109249..1109257,1109399..1109407, 1109444..1109446,1109456..1109458,1109534..1109545) /locus_tag="PA1023" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature order(1109321..1109323,1109405..1109407,1109444..1109446, 1109456..1109458) /locus_tag="PA1023" /note="active site" /db_xref="CDD:187535" gene 1109882..1110868 /locus_tag="PA1024" /db_xref="GeneID:882956" CDS 1109882..1110868 /locus_tag="PA1024" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="nitronate monooxygenase" /protein_id="NP_249715.1" /db_xref="GeneID:882956" /translation="MGVFRTRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATL SALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVET AGNDPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPG LVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKA AIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGRQV YQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQRLEGMLAGV" misc_feature 1109915..1110835 /locus_tag="PA1024" /note="NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family [General function prediction only]; Region: YrpB; COG2070" /db_xref="CDD:441673" gene 1110947..1112197 /locus_tag="PA1025" /db_xref="GeneID:880285" CDS 1110947..1112197 /locus_tag="PA1025" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="porin" /protein_id="NP_249716.1" /db_xref="GeneID:880285" /translation="MKILPVPMLAAGLALLPSFAQAEFFADGKAGLELRNFYFNRDYR QPGASQSYSEEWAQGFLLRYESGYTEGLFGLGVDALGLLGVRLDSSPERSGSGLLPYS TSDRRAAHDYSSLGLTAKLRVSHSTLKIGTLMPRLPVVQFNDTRLHPQTFQGGLLEVN EIDGLALQFGQLRQVKQRDSTNAEDLGITRGNKRNVLAGRHPGSDRFDFAGGTYRWSE RLSSSYHYANLEDFYRQHHLGVQHLLPLADDQSLKSDIRWARSTDEGGSRVNNRALNA LFTYRLGGHAFGLGYQRMSGDSGFAYLAGTDPYLVNFVQIGDFANKDERSWQLRYDYD FAAIGLPGLTFMSRYLRGEHIDLLDGGGRGKEWERDTDIAYLVQSGPLKNLGIKLRNG TFRSDFGNDIDETRLIVSYALPLW" misc_feature 1111010..1112188 /locus_tag="PA1025" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene complement(1112574..1113050) /locus_tag="PA1026" /db_xref="GeneID:878670" CDS complement(1112574..1113050) /locus_tag="PA1026" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249717.1" /db_xref="GeneID:878670" /translation="MDKKKLLRLITEKLAADLEVAVRAAQTAHETATHEENVAENKYD TLGLEAAYLAAGQSRRVEEIRQALGLYRNLVLRDFDEEQGIQLTALVTLLNADGSRRT VFLGPEAAGLKIDCEGREVLVITPRSPLGQSLIGRHPGDETGAKDSPLAVEILAVD" misc_feature complement(1112580..1113050) /locus_tag="PA1026" /note="Transcription elongation factor, GreA/GreB family [Transcription]; Region: GreA; COG0782" /db_xref="CDD:440545" gene 1113129..1114718 /locus_tag="PA1027" /db_xref="GeneID:878608" CDS 1113129..1114718 /locus_tag="PA1027" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase" /protein_id="NP_249718.1" /db_xref="GeneID:878608" /translation="MKTRNDVANKGRLSLPGKPTKTSGNEQPGEPHMIDGLLRSLGLD PNAFRDGELAVHTPIDGSRLAAVRLEGRAAVAAKVERAEQAFRAWRQVPAPRRGELVR LFGEELRRHKAELGELVSWEAGKITQEGLGEVQEMIDICDFAVGLSRQLYGLTIASER PGHHMRETWHPLGVVGVISAFNFPVAVWSWNTALALVCGNSVVWKPSEKTPLTALACQ ALFERAARAFGGDAPAHLSQLLIGDREAGEALVDARRVALVSATGSTRMGREVAPRVA ARFARCILELGGNNAMILAPSADLDLAVRGILFGAVGTAGQRCTTLRRLIAHESVKDE IVERLKAAYSRVRIGHPLEGNLVGPLIDERSYLAMQDALARAREQGGRVFGGERQLQE RYPDAYYVSPAIVEMPGQTEVVRTETFAPILYVVGYRDFDEALRLNNEVPQGLSSCIF TTDLREAELFQGAAGSDCGIANVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKAYMR RQTNTVNYSRELPLAQGITFD" misc_feature 1113279..1114679 /locus_tag="PA1027" /note="NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B; Region: ALDH_F7_AASADH; cd07130" /db_xref="CDD:143448" misc_feature order(1113387..1113389,1113405..1113407,1113414..1113416, 1113432..1113434,1113453..1113455,1113570..1113575, 1113579..1113581,1113585..1113587,1113591..1113593, 1113597..1113608,1113627..1113632,1113636..1113638, 1113933..1113935,1113942..1113947,1113954..1113956, 1113969..1113974,1114053..1114055,1114161..1114163, 1114194..1114196,1114422..1114424,1114491..1114493, 1114509..1114514,1114524..1114526,1114533..1114535, 1114539..1114550,1114566..1114571,1114581..1114583, 1114593..1114595,1114614..1114616,1114626..1114631, 1114638..1114640,1114650..1114667,1114671..1114676) /locus_tag="PA1027" /note="tetrameric interface [polypeptide binding]; other site" /db_xref="CDD:143448" misc_feature order(1113663..1113674,1113741..1113743,1113747..1113752, 1113867..1113872,1113909..1113920,1113927..1113929, 1113936..1113938,1113981..1113989,1114083..1114085, 1114377..1114379,1114584..1114586) /locus_tag="PA1027" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:143448" misc_feature order(1113672..1113674,1113981..1113983,1114074..1114076, 1114083..1114085) /locus_tag="PA1027" /note="catalytic residues [active]" /db_xref="CDD:143448" gene 1114774..1116060 /locus_tag="PA1028" /db_xref="GeneID:880062" CDS 1114774..1116060 /locus_tag="PA1028" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_249719.1" /db_xref="GeneID:880062" /translation="MGGLQQRCLWEVVTPRLSGAASLNGEQRADVCVIGAGFTGLSAA LHLLEAGRSVCVLEAYEVGHGGSGRNVGLINAGTWIPPDEVVATLGAEQGEKLNAVLG RAPALVMETIERLGIDCQLRREGTLHMSHNASGVADLQRRHAQWTRRGAPLELLTGAA CHEACGTRRISAALLDRRAGTLNPMAYSRGLATAVVQRGGQLYQRSPVLALERQGALW AVRSSAGAVLAEQVVIASNAYTEGEWTNLRRHFFPGYYYQVASAPLHGAAAERILPHG QGSWDTRTVLSSIRRDAQGRLLLGSLGNGANKPAWFLRQWADRIQSHYFPDLGQVNWE YSWTGCIAFTPDHLMRLFEPAEGLLAVTGYNGRGVTTGTVVGKAFADYLLSGERATLP LPFSDMKPVPAARLRSCAYEMGFSLYHAGQCLRVVL" misc_feature 1114852..1115961 /locus_tag="PA1028" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" gene 1116133..1116500 /locus_tag="PA1029" /pseudogene="unknown" /db_xref="GeneID:880268" gene 1116635..1117390 /locus_tag="PA1030" /db_xref="GeneID:880318" CDS 1116635..1117390 /locus_tag="PA1030" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249721.1" /db_xref="GeneID:880318" /translation="MSEIWRQCKGERHIRPLQGRLVRLVESQEQVATLQLVDTLEEQA LLEELLESSKPPVPADAEPLHYLLKTPFRYPPLRWGSRFGRRHEPSLFYAALKLETAM AESAYYRCVLWSGMVVPPPSGRILSEHASFEAGWKVERGIRLQAPPFSDHEAALTDIA DYRAPQELGSAMRSAGVQAFEYRSARCPERGCNVALFTPAAFTEKRPRNLTPWLCETT AGYVAFKPAHVPGSPKIFSWELFLVDGKLPHPA" misc_feature 1116866..1117225 /locus_tag="PA1030" /note="RES domain; Region: RES; smart00953" /db_xref="CDD:214933" gene 1117532..1117609 /locus_tag="PA1030.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965618" ncRNA 1117532..1117609 /ncRNA_class="other" /locus_tag="PA1030.1" /product="P8" /db_xref="GeneID:6965618" gene 1118158..1119519 /locus_tag="PA1031" /db_xref="GeneID:880473" CDS 1118158..1119519 /locus_tag="PA1031" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="DNA recombination protein RmuC" /protein_id="NP_249722.1" /db_xref="GeneID:880473" /translation="MLGERLATAQLAQDGLNAQLETSREAYQQLGERHARFAGEVAAL RREAELMGEERQRASQAEARWASERQGREEELRRLASERAALAAELREQQESHQQRLT DLQSARDELRAQFAELAGKIFDEREQRFAETSQQRLGQMLDPLKERIQAFEKRVEESY QQEARERFSLSKELERLQQLNLRLGEEATNLTRALKGQKTQGNWGELVLERVLEHAGL EKGREYETQVSLKGAEGERFQPDVLIRLPGDKQVVVDAKVSLTAYQQYIAADDDLLRQ QALKQHVTSLRNHVKGLSGKDYRRLEGLHSLDFVLLFMPIEAAFSTALQAEPNLFQDA FAQNIVIVSPTTLLATLRVIDSLWRQERQNQNAREIAERAGSLYDKFVLFVQDLDEVG SRLQQLDKAYAAARNKLTEGRGNLISRSEQLKLLGARASKSLPTDWLDRALVAPVEEA GEE" misc_feature <1118170..>1118544 /locus_tag="PA1031" /note="Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; Region: COG4913" /db_xref="CDD:443941" misc_feature 1118476..1119507 /locus_tag="PA1031" /note="DNA anti-recombination protein (rearrangement mutator) RmuC [Replication, recombination and repair]; Region: RmuC; COG1322" /db_xref="CDD:440933" gene complement(1119674..1122217) /gene="quiP" /locus_tag="PA1032" /db_xref="GeneID:880272" CDS complement(1119674..1122217) /gene="quiP" /locus_tag="PA1032" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-homoserine lactone acylase QuiP" /protein_id="NP_249723.1" /db_xref="GeneID:880272" /translation="MASPAFMRFLPRCGAAAAFGTLLGLAGCQSWLDDRYADSLPPTS GVQPIKGLAQNVSIRRNALGMPLIETGTFHDALFALGYVHASDRLSQMVSLRLLAQGR LAEMVGPGALEIDRFMRTVNLRQAAEIQYRNASPRLQRFFEVYARGVNAYLYRYRDKL PMDLAQSGYRPEYWKPEDSALVFALLNFGLAVNLQEEIASLTLAQKVGSDKLAWLTPT YPDENLPFDEAEKLKGLRLDGQVPGLAGVEGAARQVAALSMLGVAASNNWAIAPQRSR SGKSLMANDTHLPLSMPSVWNYVQIRSPKYQAAGVSIAGLPGVVAGFNGKLAWGMTMV LGDNQDLYLEQLRRQGNRLYYLADGKWQPTRERQETFFIKGQRPIREVIHETRHGPLL NSALGERKNILQPLPLKSGYGLAYRSIQQEADKTLDGFFDLSRAKTIEQAFDATREIR AMPLNIVFADEKHIGWQVTGRYPNRKEGRGLLPSPGWDGRYDWDGYADPILHPSDQDP QQGWLGTANHRTVQPGYGAQLSNSWYYPERAERIAQLAGASKSHDTQSMIRMQYDQTS LFVAKLQAMFDNPGMALPLRQAIDALPEAQRSRAREAYDRLMAFDGKLTASSSDAALY GAFLHESARQIFLDELGPEDGPAWKAFVETANLSYSAQADHLLGRDDSPFWDDTRTPQ KEDKPAILARSLAAAVEFCEQRLGSERKAWQWGKLHTYEWQSDSSKMAPYLGAGERAG LGAIKGYLDRGPYPAGGDHTTLDVSAYGWGQDFDTWLIPAMRLIVDFGQSEPMIGVNS SGQSGNPASPHYADGIDAWLKGRYVSFPFQPQNLDRVYGNKRLTLTPAR" misc_feature complement(1119677..1122184) /gene="quiP" /locus_tag="PA1032" /note="Acyl-homoserine lactone (AHL) acylase PvdQ [Secondary metabolites biosynthesis, transport and catabolism]; Region: PvdQ; COG2366" /db_xref="CDD:441933" gene complement(1122340..1122981) /locus_tag="PA1033" /db_xref="GeneID:880186" CDS complement(1122340..1122981) /locus_tag="PA1033" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutathione S-transferase" /protein_id="NP_249724.1" /db_xref="GeneID:880186" /translation="MIDLYYWTTPNGHKITLFLEETGLPYAIHPINISQGDQFQADFL KVSPNNKIPAIVDRQPADGGAPLSLFESGAILLYLAEKTGRFLAKDLRARQETLQWLF WQMGGLGPMAGQNHHFNRFAPEKIPYAIDRYVKETARLYGVLDQRLADRAFVAGDDYS IADMAIYPWIVPHQWQEQDLADFPHLQRWFESIRQRPATQRAYALVERINPPK" misc_feature complement(1122385..1122981) /locus_tag="PA1033" /note="GSH-dependent disulfide bond oxidoreductase; Provisional; Region: PRK13972" /db_xref="CDD:172475" gene complement(1123148..1123348) /locus_tag="PA1034" /db_xref="GeneID:880107" CDS complement(1123148..1123348) /locus_tag="PA1034" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249725.1" /db_xref="GeneID:880107" /translation="MSQEPHVHGPNCNHDHDHHHDHGHGHVHGPHCNHSHEPVRNPLK AVGRNDPCPCGSEKKFKKCHGA" misc_feature complement(1123151..>1123246) /locus_tag="PA1034" /note="Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking, secretion, and vesicular transport]; Region: SecA; COG0653" /db_xref="CDD:440418" gene complement(1123356..1123850) /locus_tag="PA1035" /db_xref="GeneID:881850" CDS complement(1123356..1123850) /locus_tag="PA1035" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249726.1" /db_xref="GeneID:881850" /translation="MNYQAQMIRIISLIMAWGVLSHLSGCSWMTGSFEDPDVKLLKVE VVKARLLEQEFVMRFRIDNPNDFSLPVRGLQYAVQLNDIQLAEGESGQWFTVPAHGHE VFDVPVRTNLWRHMKYIVKLLERPEEPIRYRLQGEVKTGLMFGRSVHLRRNGEIIPGD FIPE" misc_feature complement(1123383..1123784) /locus_tag="PA1035" /note="Dessication stress tolerance protein, LEA/WHy domain [Defense mechanisms]; Region: LEA; COG5608" /db_xref="CDD:444339" gene 1124165..1124725 /locus_tag="PA1036" /db_xref="GeneID:880069" CDS 1124165..1124725 /locus_tag="PA1036" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249727.1" /db_xref="GeneID:880069" /translation="MSRFEIAFSGQLVAGARPEVVKANLAKLFQADAQRIELLFSGRR VVIKNNLDAASAEKYRSVLERAGAIAVVAEMEVEEVVMAPPPAQTTPVEAPQTRAATG TSAPAGRLQVAPRDGYMAAFAEVDAPDFGLAPVGADLQDAKAEAEAPKLDLSRFSVAP VGSDMGQARSEPAAPAPDTSHLRLQD" gene complement(1124845..1125465) /locus_tag="PA1037" /db_xref="GeneID:880537" CDS complement(1124845..1125465) /locus_tag="PA1037" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249728.1" /db_xref="GeneID:880537" /translation="MLLTVLYIIAITAEAMTGALSAGRRSMDLFGVVLIACVTALGGG SVRDMLLGHYPLTWVRHPEYLALTAVAALVTVFIAPLMRHLRSLFLVLDAVGLVAFTL IGCQVSLEMGHSLLIAAISGVITGVFGGILRDILCNDVPLIFRRELYASVSFASAWCY LICVELELPSEQAMLITLFSGFLFRLLAIRFHWEMPKFVYQDDFDH" misc_feature complement(1124872..1125465) /locus_tag="PA1037" /note="Uncharacterized membrane protein YeiH [Function unknown]; Region: YadS; COG2860" /db_xref="CDD:442107" gene complement(1125548..1125865) /locus_tag="PA1038" /db_xref="GeneID:880529" CDS complement(1125548..1125865) /locus_tag="PA1038" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249729.1" /db_xref="GeneID:880529" /translation="MHSLASYIRAIHALPSPVSISDAQVEEQQRCEDGVEIHSCEALY RFDNGVRLRQHCERDLLPSSGACEECWIGYEVLDSAGQEISPRYKHFVNACQERFWLR MHA" gene complement(1125865..1126338) /locus_tag="PA1039" /db_xref="GeneID:881703" CDS complement(1125865..1126338) /locus_tag="PA1039" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249730.1" /db_xref="GeneID:881703" /translation="MTQPSCPCGSGDPLDDCCGRYHQGHPAPTAEALMRSRYSAYALG LVDYLRDTTLPAQQAGLDLDGIRAWSHGSTWLGLEVENHEVLGGQPEHARVTFVARWH DADGEHAHRECSGFVQRNGRWYFLDPTVALKLGRNDPCPCGAGGKLKKCCGPWIT" misc_feature complement(1125868..1126338) /locus_tag="PA1039" /note="hypothetical protein; Provisional; Region: PRK00183" /db_xref="CDD:166842" gene complement(1126341..1126838) /locus_tag="PA1040" /db_xref="GeneID:881739" CDS complement(1126341..1126838) /locus_tag="PA1040" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249731.1" /db_xref="GeneID:881739" /translation="MSEPISPRTPQQALAALLARYAPKHLLLVGASRLPAVEAFIHNH PQCQLAHSPAAALPAELAGQRFDLALFVDCLEHLPQRTGLQLLAGVRNLNASRVAVLV DLEASDWQETDFFALAMQNSERFQREGQTLTLYTYDLYEYKQVPDWLNAKFWANPENF GKYWW" misc_feature complement(1126344..1126817) /locus_tag="PA1040" /note="Family of unknown function (DUF6231); Region: DUF6231; pfam19742" /db_xref="CDD:437574" gene 1126969..1127601 /locus_tag="PA1041" /db_xref="GeneID:881756" CDS 1126969..1127601 /locus_tag="PA1041" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249732.1" /db_xref="GeneID:881756" /translation="MSITRTALPLILVSGLLTGCAGLQKSDWPTCAAVGGVTGAGLGA IESSSWAGWGALIGGGVGAAYCWVHGAGEQVAPPPPQPVEEVAPPPPVVKEETIVVRD LHFAFDSSKVDAADSEKLNGIAERLKGEAASTRLSITGHTDSVGSDAYNQKLSERRAN AVANYLIDAGVPSSIIVGVQGLGESQPVADNKTREGRAENRRVEILIKRE" misc_feature 1127266..1127589 /locus_tag="PA1041" /note="Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; Region: OmpA_C-like; cd07185" /db_xref="CDD:143586" misc_feature order(1127287..1127292,1127392..1127397,1127404..1127406, 1127416..1127421,1127428..1127430,1127557..1127559, 1127569..1127571) /locus_tag="PA1041" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene 1127717..1128016 /locus_tag="PA1042" /db_xref="GeneID:881794" CDS 1127717..1128016 /locus_tag="PA1042" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249733.1" /db_xref="GeneID:881794" /translation="MKAFLGLGKLVTLVFWGAVLVNLLHPFAYPLNWLLSIAGGLILL IHLIEILVLGGRLKARAHPWLDRLQVLLFGVFHMLALPALSPASELPQDKEDDHA" misc_feature 1127726..1127989 /locus_tag="PA1042" /note="Uncharacterized conserved protein YhhL, DUF1145 family [Function unknown]; Region: YhhL; COG3776" /db_xref="CDD:442990" gene 1128009..1128818 /locus_tag="PA1043" /db_xref="GeneID:881514" CDS 1128009..1128818 /locus_tag="PA1043" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249734.1" /db_xref="GeneID:881514" /translation="MRKAMLGLFLVVPLAWAGAVFSAEAPPARQQGIGGTVKVQANSV MRLPKRAQELRLRRVEIGEDAALLIPLEVSVLRIEELHMAKNARIGVAPGEERISIEV VSGRLADGSIISAPGATGTFRQSAGNGRDLTLRLQAVEVESLLLDARGGVGAPGYDGL DGASGKASGCLWGSALKGGDGQSGSDGGPGGAGGRIRLEVPGDFPLERLQTRLQGGVG GAGGKAGKPGAADNATGCWIYSVDAGRAGRSGEDGANGTNGSDGSLDVVRF" gene complement(1128857..1129321) /locus_tag="PA1044" /db_xref="GeneID:881555" CDS complement(1128857..1129321) /locus_tag="PA1044" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249735.1" /db_xref="GeneID:881555" /translation="MTPYALVYALHVLAALVWVGGMFFAWTILRPAAVAALEAPARLG LWLEVFRRFFHWVWAAVILLPISGVGMLHLSFNGFAGAPRYVQVMMGLYVAMLALFLR VQALQVPELRRAVQAQDWPAGGQALGKIRRTVGFNLLLGLLLIALVAARPSL" misc_feature complement(1128911..1129321) /locus_tag="PA1044" /note="Uncharacterized membrane protein [Function unknown]; Region: COG5615" /db_xref="CDD:444346" gene 1129451..1131595 /locus_tag="PA1045" /db_xref="GeneID:881660" CDS 1129451..1131595 /locus_tag="PA1045" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase DinG" /protein_id="NP_249736.1" /db_xref="GeneID:881660" /translation="MLSAELKSQIQGAYTRFLEAKELKPRYGQRLMIAEVAKALGVIK EDEEGHREGEPAVVAVEAGTGTGKTVAYSLAAIACAKASGKRLVIATATVALQEQIVH KDLPDLLRNSGLAFSFALAKGRGRYLCLSKLDVLLQEGQAQSATAQLFADDGFNIDVD ETSSKLFNQMIERLAGNRWDGDRDSWPEAIDDAHWAQLTTDHSQCTNRHCPNFQQCAF YKAREGMTKVDVIVTNHDLVLADLALGGGAILPDPRETLYVFDEGHHLPDKAIGHFAH FTRLRATADWLEQIAKNLTKLLAQHPLPGDLGRLIEQVPELAREIKTQQQFMFTACEE IGDFRAGEDMEGRERPRHRFVGGVVPEHIREMGIELKKGFSKLTDLFTRLTDILKEAM DGEGAGGIASHQAEEWYPLFGSLLARAQGNWELWTAFTCEDPQDSPPMARWLTLAESG SFYDIEANASPILAAETLRRNLWNVAYGVLVTSATLTALGTFDRYRMRAGLPRNAVTA VVPSPFHHAEAGVLRVPDLKADPRNAAEHTAAIIRELPELVKGARGSLVLFSSRKQMQ EVFDGLDRDWRKRVFIQGNLSKQETLNKHKSRVDDGEDSVLFGLASFAEGVDLPGAYC EHVVIAKIPFAVPDDPVEAALAEWIEARGGNPFMEIAVPDASLRLVQACGRLLRTEQD RGTITLLDRRVVTQRYGKAILNALPPFRREIA" misc_feature 1129451..1131589 /locus_tag="PA1045" /note="ATP-dependent DNA helicase DinG; Provisional; Region: dinG; PRK11747" /db_xref="CDD:236966" gene 1131674..1133947 /locus_tag="PA1046" /db_xref="GeneID:879650" CDS 1131674..1133947 /locus_tag="PA1046" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249737.1" /db_xref="GeneID:879650" /translation="MELRKTGFMIRSRWHLPLLLGLLAVATPLAASDTQQVLFNFVKP MAVVGITLEDADLPSATAEATPEGDILRRVTFSPAQRPTLRMSPALGRWDWSAADYVS LRIQNAMSWDMTLEVAIEGEQGAPGLQASIELPAGPPQTLLVPLRAVSPEALGMRAGP PMPQMVEGQRVLLAPRVEGSLDRARVGALSLSLRSPQAPQSILLGRFGIRTGRAVERS ILTGLIDRYGQYSRADWPEKIRSDEQLRSAYAAEAAQLRDWERQTPARDRFGGLLGGP VFEASGFFRTEKRGGRWWLVTPEGHPFWSLGVNAVTADGSRTYVEGREPMFAELPAEG EPLAAFFGEGDDRRGVAAQAGRRFGHGRWFDFLGANRQRIAPQASADQLAGEWRQRTL ERLSAWGFNSLGNWSDPALAAQARMPYSLPLSIAGDYATVSSGFDWWGAMPDPFDPRF AMAAERVIAIAARDHRDDPWLLGYYADNELAWAGRDGSAQARYGLAFGALTLSMDSPA KRAFVKQLKAKYLGHEALAEAWGIELAAWEALEAPGYAAPLPGEGHPAIAEDYSAFLR LYADAYFKTLRDALQWHAPNHLLLGGRFAVSTPEAITSCARYCDLLSFNLYTPLPGQG LDDSLLARLDKPVLISEFHFGSRDRGPFWGGVSEAANERARGDSYRTFLEAALKSPYI VGAHWFQYLDQPASGRLLDGENGHIGLVGITGLPFAGFVDTVRRSNLAALSRLSAMAR SMPAVEPLPPREDSAGS" misc_feature 1132985..>1133440 /locus_tag="PA1046" /note="Beta-galactosidase GanA [Carbohydrate transport and metabolism]; Region: GanA; COG1874" /db_xref="CDD:441478" misc_feature <1133501..1133776 /locus_tag="PA1046" /note="Glycoside hydrolase family 113 beta-mannosidase and similar proteins; Region: GH113-like; cl16298" /db_xref="CDD:449734" gene 1134024..1135202 /locus_tag="PA1047" /db_xref="GeneID:881411" CDS 1134024..1135202 /locus_tag="PA1047" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="esterase" /protein_id="NP_249738.1" /db_xref="GeneID:881411" /translation="MPRPLSHRNLPMTPQGHCDSRFAPLAEAFARLFDNPQERGAALC LEVGGETVVDLWGGVADKDGEQPWQRDTILNLFSCTKTFTAVAVLQLVAEGKLELDAP VAHYWPEFAAAGKAAISVRQLLCHRAGLPALREQMPPEALYDWQAMTTALAAEEPWWT PGEAHGYAPITYGWLLGEVIRRVDGREPGEAIVARTAAPLGLDFHVGLDDSQFGRVAH MARSKGSLGDAAAQRMLKTMMSEPLALTTRAFTNPPSILTSTNKPEWRRMQQPAANGH GNARALAGFYSGLLQGRLLEDELLGQLAHEHAVGEDRTLLTRTRFGLGTMLDQPGVAN ATYGLGPKAFGHPGAGGSIGFADPERDLAFSFVSNALGPYVLMDPRAQQLARVAGECL " misc_feature 1134096..1135187 /locus_tag="PA1047" /note="Region: Beta-lactamase; pfam00144" /db_xref="CDD:395092" gene 1135408..1136289 /locus_tag="PA1048" /db_xref="GeneID:881433" CDS 1135408..1136289 /locus_tag="PA1048" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249739.1" /db_xref="GeneID:881433" /translation="MKLLKTSTLLLCMTASGCSYFQTQDASSQPAKAPAEQASSHSWW PFGKDDGQTVAKQATEQKAEAEHVGSSHWWWPFGKDEGGRDVAAKAAEQKAEIAAAKK EVAAAAEPKAANPWWWPFGASSASKASGKPALVQQKVTKEWLDAHEKALREAIAGSEF TLERRDNALIVIAPADYSFNPKRHTMLMPITLNPLGKVAKMAQADPQSGILVLGHTDS TGSKAVNDKLSFERAQSVAAIFRLSGLKGDQLRLKGVGSDMPRADNASAAGRAQNRRV EVLYTQRASLLSLAQGN" misc_feature 1135990..1136241 /locus_tag="PA1048" /note="Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; Region: OmpA_C-like; cd07185" /db_xref="CDD:143586" misc_feature order(1136053..1136058,1136065..1136067,1136077..1136082, 1136089..1136091,1136215..1136217,1136227..1136229) /locus_tag="PA1048" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene 1136388..1137035 /gene="pdxH" /locus_tag="PA1049" /db_xref="GeneID:881467" CDS 1136388..1137035 /gene="pdxH" /locus_tag="PA1049" /EC_number="1.4.3.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="pyridoxine/pyridoxamine 5'-phosphate oxidase" /protein_id="NP_249740.1" /db_xref="GeneID:881467" /translation="MTQSLADMRREYTRDGLSEANAPSDPFSLFRQWFDDAVKTERLP VEPNAMTLATVDADGYPHCRILLLKGLDERGFTFFTNYESAKGRQLAANPRAAMTFFW PALERQVRIEGSVEKVTPEESDAYYQVRPLGSRLGAWASPQSRVIADRAELERLLADT ERRFADQPPSCPEHWGGYRLLPQRIEFWQGRPSRLHDRLDYRRQDGGWLRERLAP" misc_feature 1136394..1137032 /gene="pdxH" /locus_tag="PA1049" /note="Pyridoxine/pyridoxamine 5'-phosphate oxidase [Coenzyme transport and metabolism]; Region: PdxH; COG0259" /db_xref="CDD:440029" gene 1137043..1138155 /locus_tag="PA1050" /db_xref="GeneID:881498" CDS 1137043..1138155 /locus_tag="PA1050" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249741.1" /db_xref="GeneID:881498" /translation="MFELDSTLAQHIVDRAMAILPHNINVMDAQGMIIGSGDPSRLHT RHEGAQLVLANRRVVEIDEQAAACLRGVRPGVNLPLLHAERLVGVLGITGAPEVVRPY AELVRMAAEMLMEQRQMQDERHWQRQRHEAWLRQLLDPGHGLGALAADAEHLGLAMHW PRQAVFLELPEHADPLPCQARLLAALGGRAEHWSAALGERLVFWCRPVAHADTLEHWL ERADARGWGVARLCAGDPAHDLAELRASACAARDLLDYARSRLPGRRVVTLDGHRLAS LLFSQRDSWQVRQLLAPLQRLLDHDPQGSLAATLESWCAHDGHAQACAQALGIHRNSL RYRLERIASISGLDLARLEHRQQLLLGLQLLVPRRG" misc_feature 1137052..1137438 /locus_tag="PA1050" /note="Putative sugar diacid recognition; Region: Diacid_rec; pfam05651" /db_xref="CDD:461704" misc_feature 1137271..1138107 /locus_tag="PA1050" /note="Sugar diacid utilization regulator CdaR [Transcription, Signal transduction mechanisms]; Region: CdaR; COG3835" /db_xref="CDD:443046" gene 1138314..1139672 /locus_tag="PA1051" /db_xref="GeneID:881357" CDS 1138314..1139672 /locus_tag="PA1051" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_249742.1" /db_xref="GeneID:881357" /translation="MTLVLILLALIAFIVLSTTRLKLHPFLALLAAALIAGFAYQVPT AEIVKTVTGGFGSILGYIGIVIVLGTIIGVILERSGAAITMAESVIRLLGERFPTLTM SIIGYLVSIPVFCDSGFVILNSLKNALAARMKISTIAMSVALATGLYATHTFVPPTPG PIAAAGNLGLDASLGLVIVVGLVVAFVTAMAGMWWANRFVGKDIPLVDDGQVVQTEED FSELRARYGKLPSATQAFAPIFVPILLICLGSVAVFPSKPLGEGVLFACLNFLGQPVI ALLVGLALACTLLKGQSKREEFHERVVEGIQSAAPILLITGAGGAFGAMLKITPLGDY LGSTLSALGIGLFMPFVVAAALKTAQGSTTVALVTTSALVAPLLPQLGLDSEMGRVLT VMAIGAGAMTVSHANDSFFWVVTQFSRMTVSTAYRAQTLATLVQGIAGMLAVWLLSLV LL" misc_feature 1138350..1139669 /locus_tag="PA1051" /note="H+/gluconate symporter GntT or related permease, GntP/DsdX family [Carbohydrate transport and metabolism]; Region: GntT; COG2610" /db_xref="CDD:442022" gene 1139714..1140859 /locus_tag="PA1052" /db_xref="GeneID:881393" CDS 1139714..1140859 /locus_tag="PA1052" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249743.1" /db_xref="GeneID:881393" /translation="MKIVIAPDSFKESLSAPDVAEAIARGWRRVFPQAEVLLRPLADG GEGTVDAVLAATAGERRECRVEGPLGEPTLAHWGWLDDATAVIEMASASGLHLVPRDR RDATRSSSRGTGELIRAALDAGARKIILGLGGSATNDAGAGLLGALGVRFLAADGEEL APGGAALAGLHSLDLGGLDPRLVDVAVEVAADVDNPLCGPRGASAVFGPQKGASAEQV AQLDAALAHFAKVVAATLGEDFSRVPGVGAAGGLGFAARAFLRARFRPGIELVAELAG LADALVGADLVLTGEGRLDAQSLHGKTPVGVARIARQAGVPVVALAGSLGDGYQRLHD AGIDAAFSLAPGPISLEQACAGAAAELEARAEQIARLWRLAQASREG" misc_feature 1139717..1140832 /locus_tag="PA1052" /note="Glycerate kinase [Carbohydrate transport and metabolism]; Region: GlxK; COG1929" /db_xref="CDD:441532" gene complement(1140838..1141080) /locus_tag="PA1052a" /db_xref="GeneID:17373347" CDS complement(1140838..1141080) /locus_tag="PA1052a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719739.1" /db_xref="GeneID:17373347" /translation="MDYFIIVVTTAAGLYFHWWIYWRIRRWMDRDLALSFAGDDPQKR DYLLQRLAEAKASKVKRRDLPAWLERAAADYPSREA" gene 1141268..1141732 /locus_tag="PA1053" /db_xref="GeneID:881262" CDS 1141268..1141732 /locus_tag="PA1053" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249744.1" /db_xref="GeneID:881262" /translation="MRKSALIVASFTAMALALGGCQSSLTGDTYSREEARTVQTVRMG TIQALRPVKIEGTKTPIGSIAGAGVGGVAGSAVGGGKGSYVAAIIGAVAGGLLGAATE EGLTRTQGVEITVREDDGSTRAYVQQVDQGQIFRVGERVRILTVNGTSRVAH" misc_feature 1141268..1141729 /locus_tag="PA1053" /note="Outer membrane lipoprotein SlyB [Cell wall/membrane/envelope biogenesis]; Region: SlyB; COG3133" /db_xref="CDD:442367" gene 1142061..1144862 /locus_tag="PA1054" /db_xref="GeneID:881315" CDS 1142061..1144862 /locus_tag="PA1054" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="monovalent cation/H+ antiporter subunit A" /protein_id="NP_249745.1" /db_xref="GeneID:881315" /translation="MILALIIALPFMGALLPLLAERGGRTLCAASAGVAPLIGLILLL GQRGTVFAGQTLTASYSWLPEIGINLSLRLDGLGFLFALLILGIGLLVILYARYYLSE QEPMGRFFAFLLLFMGSMLGVVLAENLLLMMLFWELTSLSSFLLIGFWGSRSDARKGA RMALTVTGGGGLALLAGVLLLGHIAGSFELTEVLAAGELIRAHALYPLVLILILLGVF TKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLYPALAGTEWFFYLVSL SGLVTLLLGAGMALFQHDLKGLLAYSTISHLGLITLLFGLDSPLSNVAAVFHIINHAT FKASLFMAAGIIDHETGSRDMRLINGMWKYLPHTAVLAIVASLAMAGVPLLNGFLSKE MFFGETLSQNLLGSFNWLVPAVATLAGVFSVAYSLRFIHDVFFNGEPARLPKFPPHEP PRYMKVPVEILVFLCLLVGMLPAYTVAPLLAAAASASLGGQLPEYSLAIWHGFNLPLL MSVVALVGGVLVYVLRKPLFNWYAGLPEVDAKLVFEQQVQRVVALAARLTAWLENGSL QRYLAWLLGAALVVVAVELAPLARLTGSRGLTPLDGITALGMLVLAFSGLATALFHRM RLVALLILSVAGLLVALAFARFSAPDLALTQLSVEVVTMVLLMLALYFLPSRTPAESS SLRGLRDVALAGGVGMLVALLAYAVLTRPYESIAGFFVENSVSGGGGYNVVNVILVDF RGFDTLGEISVLAIAGVGIYAMLAGFALHKPTCDPQGRNWAHAKHPLILETLSRVLLP LALLISVFIFLRGHNLPGGGFIAGLVTAIALVLQYIASGSQWVEQRLPLNYAAMAGAG VLIAGLTGLGSWLFGYPFLTSAFGHFELPLIGEIELATAMLFDLGVYLTVVGAALLIL SYLGKLSLMPEPVAQEEAL" misc_feature 1142061..1144856 /locus_tag="PA1054" /note="putative monovalent cation/H+ antiporter subunit A; Reviewed; Region: PRK12648" /db_xref="CDD:237157" protein_bind complement(1143547..1143559) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 1143569..1143581 /locus_tag="PA1054" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1144862..1145200 /locus_tag="PA1055" /db_xref="GeneID:881178" CDS 1144862..1145200 /locus_tag="PA1055" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="monovalent cation/H+ antiporter subunit C" /protein_id="NP_249746.1" /db_xref="GeneID:881178" /translation="MEALFAITLGLLTASGVYLLLRARTFPVVLGLTLISYAVNLFLF AMGRLGGSVAVIGTPGEYGDPLPQALVLTAIVIGFAMTAFVVVLALRGLGDLGSDHVD GRPDEEEPRP" misc_feature 1144862..1145185 /locus_tag="PA1055" /note="putative monovalent cation/H+ antiporter subunit C; Reviewed; Region: PRK09094" /db_xref="CDD:236377" gene 1145197..1146696 /locus_tag="PA1056" /db_xref="GeneID:881220" CDS 1145197..1146696 /locus_tag="PA1056" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="monovalent cation/H+ antiporter subunit D" /protein_id="NP_249747.1" /db_xref="GeneID:881220" /translation="MSHWLILPILLPLFAGSLLLLPLAERWQRGLSLLAALALIPLSL LLIRTAASGDLSVYALGNWAAPFGIVLMLDRLAALMLLATAVLGSAALIYALRGEDRL GKHFHALFQFQLLGINGAFLTGDLFNLFVFFEILLIASYALLLHGGGAERVRSGLHYV ILNLVGSAFFLIAVGTLYGLTGTLNMADMAQKIAMADAERAPLLAAAGLLLLVVFALK AALLPLYFWLPRAYATASAPVAALFAIMTKVGIYSILRVYTLVFGDAAGELANLAQAW LWPLALATLGLGAIGALAARTLQGLLAYLVVVSAGTLLAGVALGSERALAASLYYLLH STWIAGGLFLLADLVARQRGDKAGDLVQGPALQNPRLLGGAFFIGAIAVAGLPPLSGF FGKVMLLQSVAPGSQALALWSVVLGSGLVALVALSRAGSTLFWRTGHTVLGSAELDHG RLFACILLLSAGPLLVFAAKPLLAYVQATAAQLHDLDLYRQIITRGGAA" misc_feature 1145197..1146693 /locus_tag="PA1056" /note="putative monovalent cation/H+ antiporter subunit D; Reviewed; Region: PRK12666" /db_xref="CDD:237166" gene 1146693..1147217 /locus_tag="PA1057" /db_xref="GeneID:881110" CDS 1146693..1147217 /locus_tag="PA1057" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="monovalent cation/H+ antiporter subunit E" /protein_id="NP_249748.1" /db_xref="GeneID:881110" /translation="MISRSLPRPLLRVLPHPVLSVLLLLVWLLLVDSFAIGHWLLGAF LGVCIPLLTNRLLVGRSQEWHPLLLLKLLVLVMWDILVANIQVARLTLGPIERLRPAF VEVPIELENDLAISVLVSIVSLTPGSVSSDLSDDRKTLLVHGLDVPDKAALIAEIKQR YEAPLKEIFPCSLT" misc_feature 1146786..1147202 /locus_tag="PA1057" /note="putative monovalent cation/H+ antiporter subunit E; Reviewed; Region: PRK08965" /db_xref="CDD:181598" gene 1147202..1147471 /locus_tag="PA1058" /db_xref="GeneID:881139" CDS 1147202..1147471 /locus_tag="PA1058" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="monovalent cation/H+ antiporter subunit F" /protein_id="NP_249749.1" /db_xref="GeneID:881139" /translation="MLAYVIPLCLALLGLALLLTLARLVKGPCLPDRALALDTLYVNA IALLVLYGIWRDSDLFFEAALLIAVLGFVGTVAVAKYMLRGDIIE" misc_feature 1147202..1147468 /locus_tag="PA1058" /note="putative monovalent cation/H+ antiporter subunit F; Reviewed; Region: PRK06161" /db_xref="CDD:180435" gene 1147468..1147815 /locus_tag="PA1059" /db_xref="GeneID:881016" CDS 1147468..1147815 /locus_tag="PA1059" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="monovalent cation/H+ antiporter subunit G" /protein_id="NP_249750.1" /db_xref="GeneID:881016" /translation="MTGEPLSLWLEIIVSAFLLLGSAFVLIGAIGLYRLPDFFMRLHG PTKATTLGVGGVIVASLIYFSNRQAGISLHELLISLFLFISAPVSAYMLAKAAVLQQL PLEKKTRGKPWEQ" misc_feature 1147492..1147791 /locus_tag="PA1059" /note="Multisubunit Na+/H+ antiporter, MnhG subunit [Inorganic ion transport and metabolism]; Region: MnhG; COG1320" /db_xref="CDD:440931" gene 1147928..1148833 /locus_tag="PA1060" /db_xref="GeneID:881064" CDS 1147928..1148833 /locus_tag="PA1060" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249751.1" /db_xref="GeneID:881064" /translation="MTRTRWFALACLILAMALWGSSYVVLKVAFRELPPLWVIFGRMA LGSLVFLVAWRWRGRIDYRPGDWKYLLGLAVCEPCLYFLCESFALQYTSAAQAGMITA LLPLLVAVGAWLLLHERIGRMTWIGFGLAVLGSIWLSLAGEPDLHAPQPLLGNFFELL AMLCATGYTLLLKHLSARYSAFALTAMQAFVGTLFFLPLALASADLPSQPSALGIQAV VYLGVVVTVGAYGLYNFGVGRLPASQASGFINLIPVFTLVFAALFLGETLNGPQMLAA GLVFIGVAISQWRSAPPPPPAGVLN" misc_feature 1147940..1148812 /locus_tag="PA1060" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene 1148844..1149941 /locus_tag="PA1061" /db_xref="GeneID:881260" CDS 1148844..1149941 /locus_tag="PA1061" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249752.1" /db_xref="GeneID:881260" /translation="MTVDHRQWAREAIRIIEADFQRSADTHLIPLETPGLPGVELYFK DESSHPTGSLKHRLARSLFLYALCNGWLRPAAPVIEASSGSTAISEAYFARLLGLPFI AVMPASTSKEKIAQIAFYGGQSHLVEDPTQIYAESERLARESGGHFMDQFTYAERATD WRANNNIAESIFQQMRHEPYPTPTWLISSPGTGGTLATLGRYVRYRQHCTRVLCADAE RSVFFDAYVSGDRGLTLDCGSRIEGIGRPRVEASFLPEVIDAMVKVPDAWSLAAMHYL ARRLGRRVGGSSGTNLIGALVAARQMVAAGEKGSLVAILCDGGERYATTYYDPVWLAR QGYALEPLVEALAACIERGVALPDGLLVAGL" misc_feature 1148916..1149818 /locus_tag="PA1061" /note="Cysteine synthase [Amino acid transport and metabolism]; Region: CysK; COG0031" /db_xref="CDD:439802" gene 1149952..1150473 /locus_tag="PA1062" /db_xref="GeneID:880325" CDS 1149952..1150473 /locus_tag="PA1062" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249753.1" /db_xref="GeneID:880325" /translation="MHRLRAAETGDIEAMTDLLLRHGPNPWNHLPEEGVRAHLRAIAD GEVRAVLAERDDRLLGFASFRRTEDFAHYQPQRADAPRAYICEAVVHPAAAGQGLGSA LLEAVLAQLADEGIEDVYIDRHEENLASAGMMRKAGFVELETYADPARRPNGSGRSTV CHRNLSLQRRAVR" misc_feature 1149958..1150413 /locus_tag="PA1062" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" gene 1150470..1150721 /locus_tag="PA1063" /db_xref="GeneID:880977" CDS 1150470..1150721 /locus_tag="PA1063" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249754.1" /db_xref="GeneID:880977" /translation="MSFIRLKVRAAFMVHGYDADNREIVEQIGEERFVEKLLRIERIQ SISEKYLLVSASHGRVAYWEYEGGLTALRRCLEQAGLLL" gene complement(1150750..1151415) /locus_tag="PA1064" /db_xref="GeneID:881840" CDS complement(1150750..1151415) /locus_tag="PA1064" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249755.1" /db_xref="GeneID:881840" /translation="MRPARLLVYSLLPLFAACQVWKPESPSTSVDTRFQGELVKINGA LQFRPCTEKRLFSIEDVANTGLRREADSLFDDGAQGLFVDLRGTMGPAKVRGTDGKLE VSRLYRVQNEGPGCDDPNFKLLTFAANGNEPFWSARVNNQGLRLDRPEHETLALPYVA EELPNGSTSYSSEANGKKVELWIAPSSCTDSMSGAFSSYSAELRIDGETLRGCAYPGA LGK" misc_feature complement(1150762..>1151214) /locus_tag="PA1064" /note="Uncharacterized membrane protein [Function unknown]; Region: COG3650" /db_xref="CDD:442867" gene 1151435..1151908 /locus_tag="PA1065" /db_xref="GeneID:881681" CDS 1151435..1151908 /locus_tag="PA1065" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249756.1" /db_xref="GeneID:881681" /translation="MRPRYRASGPSSSPDRTSSQPGSRSMIQCKRVYEPASPADGRRV LVDRLWPRGIRKEALAMDDWLKEVAPSNEVRKQFCHDPALFDSFREHYRAELQAHPEH WWGLLDSAREGTLTLLYGAHDQQHNNAVVLAEFLEEELDRQQPGSSPTCYADRLS" misc_feature 1151510..1151860 /locus_tag="PA1065" /note="Uncharacterized conserved protein YeaO, DUF488 family [Function unknown]; Region: YeaO; COG3189" /db_xref="CDD:442422" gene complement(1151919..1152575) /locus_tag="PA1066" /db_xref="GeneID:880864" CDS complement(1151919..1152575) /locus_tag="PA1066" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_249757.1" /db_xref="GeneID:880864" /translation="MAKATLHWKPLTFTQREACMKIILIGASGTLGKGIDKELGERHE IVRVGHSSGDFQVDISDSDSIRALFEKTGRFDALVAAVGKVHFGALEEMGEAQYQLGL RDKLMGQVNLVLLGREYANDGGSFTLTSGVLAEQPIRFGSSASMVNCAVEGFVRGAAL ELPRGLRINAVSPTVVSEALPGYAPYFRGFKPVPAADAALGYARSVEGAQTGQVYRIW " misc_feature complement(1151922..1152518) /locus_tag="PA1066" /note="short chain dehydrogenase; Provisional; Region: PRK07578" /db_xref="CDD:236057" misc_feature complement(order(1152039..1152044,1152048..1152059, 1152132..1152134,1152144..1152146,1152183..1152191, 1152264..1152266,1152327..1152335,1152399..1152407, 1152423..1152431,1152483..1152494,1152498..1152500)) /locus_tag="PA1066" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:212497" misc_feature complement(order(1152087..1152089,1152093..1152098, 1152102..1152110,1152114..1152119,1152126..1152131, 1152138..1152143,1152150..1152167,1152171..1152173, 1152231..1152236,1152243..1152248,1152270..1152272, 1152282..1152284,1152288..1152293,1152297..1152299, 1152306..1152311)) /locus_tag="PA1066" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:212497" gene 1152624..1153538 /locus_tag="PA1067" /db_xref="GeneID:880148" CDS 1152624..1153538 /locus_tag="PA1067" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249758.1" /db_xref="GeneID:880148" /translation="MKDLDDLAAFAVLHDLGSFTRAAERLGCSKGQLSKRIGVLEQKL GVTLLHRTTRRLSLTAAGAALLPEAQALLVQAERARQAVARLQERAEGRVRVTLPVSL GETLFDALLEDFQERHPLLRVELDLYNGLRDLVGEGFDLAIRSGVEQDARLVARPLFV LQEITCASPAYLARHGEPQRPAELAERECLLNSHYSGHEEWLYHRHHRLERVRVAGFL ASNHYSLLKKAALAGTGIARLPSYMVHDELGDGRLAWLLRDYQTRSTPMFLVHPFQGG LPRRTQVLADYLLDWFERSRRQLIGLEG" misc_feature 1152633..1152809 /locus_tag="PA1067" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 1152897..1153487 /locus_tag="PA1067" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(1152927..1152929,1152939..1152941,1153056..1153058, 1153098..1153100,1153104..1153106,1153290..1153292, 1153341..1153343,1153422..1153424) /locus_tag="PA1067" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature order(1152930..1152935,1152945..1152950,1152954..1152959, 1152966..1152968,1152978..1152980,1152984..1153004, 1153185..1153187,1153272..1153286,1153305..1153310, 1153317..1153319) /locus_tag="PA1067" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 1153637..1155547 /locus_tag="PA1068" /db_xref="GeneID:879652" CDS 1153637..1155547 /locus_tag="PA1068" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="heat shock protein" /protein_id="NP_249759.1" /db_xref="GeneID:879652" /translation="MAESRTGPLACERTPFIERLDRDMQSSFPQSNTPQIRRAGVDLN GVMSVLSKHLYSTPTVALRELVQNAHDSILRRRLEQPDWQGPSRIEVIGDSASNTVRI VDTGAGLTEHEIHAYLATVGVGYTRGLRQSGHEDSGLIGMFGLGFLSAFVLARRVSVR TTSYQQPELGFCYVSSNAEQYSVTPMPARPVGTEITLELQDEYSALTQAARLREILER YCVLLREPIHVGGDAQSINPEPPPWRLAADAALHPLQRQRRDLEFAARFEHDFEPICC LPVRPDERVDVQGLLWIQDGGTYGTSDNRNLSVFLRGMLLDDDARDLLPSWAGFVGGV IESNRLTPTASREDLQRDDHYAAIQHALAEALIAGLGEVARQQPEAWRRVLLRHNEAL LGAALCDERLFALMMDSLRVPTSQGDLPASELLSRGAVHVLLDNDSGFEEMLFRAMGV PVAHGNRYAVVPFLRRWAQAKGMRLVELGTEQGNRQLFRLDRLPEHETGWLAEHLGGA EEQLVIARFSPEELPLVVVPDRDAELKRRLEDDEADKRISTAALRLARQFTRKLDNRQ PSRLYVNLDNPAVQALLAAVGEERDEAAHAALLLRSFKVIIAGQGRGQPATSLNQALA GLADSVKRLLEQ" misc_feature 1153745..1155436 /locus_tag="PA1068" /note="HSP90 family protein; Provisional; Region: PRK14083" /db_xref="CDD:237603" gene 1155584..1157878 /locus_tag="PA1069" /db_xref="GeneID:877949" CDS 1155584..1157878 /locus_tag="PA1069" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249760.1" /db_xref="GeneID:877949" /translation="MDIWNWVEKLRADLREAGQEQSARLIDELTAYVCDLEVERAEAL LPEVKALSRTLNNPWLEIFVRHWEMRNRVGNQLEGETALADAVSLFELANRDDTQACP QSVCVTQDLASCYANVDGPGWVEERIEVCDETLARIDPTWACFHCLSNEKAEALLDDG RGEDALAFLAEQEKKILAAGEEVFDSLLEMRVAILLNLGRAEQALALIGEMEEKVEGA EWNNISQPRRLYKAHGLALLGRDEEALEALLPFSEIAPRYRTIWLRAVYLLLQRTPER NTWDFGGRLQQMLEHYSQKGAHRVVIDVASQAIRLALQRGSVWSARRHLALAEQHAQQ LQRDRGASQLLAGLREEIDAAPQQQELPVPAAELLDWLAAQGSEDAPRNPEKEVQWLL QALAERPDDTALREVAASALQACSADDEAIDLLWEYVERHTDEEQQLAYYLLNALLAR GEYDQVKRLGRLYADSVPLIALWSEVKLAEKLNDWPELERACQSVLEISPGSLGAHSL LGKALMEQDRFAEAALAYQRLAGKLEEPQSVQWDQMTAASAARDWTMLREVAAGMGME FAAGDGPIEEDWGWVIVRYIEDGEALDYYARRTGPVTARVLENAPGNRSQRVGDWVVF DAGLIYPAPEDEEERKRFVPTYAMVHVLESGGYSPSWLVDGVYPGDEAFDAFRETLDA RGWKVWVHSNRDYQVTDASSGEELRAIYFTVATPAQQAPRDLHQALQEATGQWPHRMC WLRLAEAAEVDTQPHLDAIERYGL" misc_feature 1156040..>1156627 /locus_tag="PA1069" /note="Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]; Region: Spy; COG3914" /db_xref="CDD:443119" misc_feature 1156436..>1157167 /locus_tag="PA1069" /note="Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]; Region: Spy; COG3914" /db_xref="CDD:443119" gene complement(1157954..1158655) /gene="braG" /locus_tag="PA1070" /db_xref="GeneID:878069" CDS complement(1157954..1158655) /gene="braG" /locus_tag="PA1070" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_249761.1" /db_xref="GeneID:878069" /translation="MLSFDKVSTYYGKIQALHDVSVEVKKGEIVTLIGANGAGKSTLL MTLCGSPQAASGSIRYEGEELVGLPSSTIMRKSIAVVPEGRRVFSRLTVEENLAMGGF FTDKDDYQVQMDKVLELFPRLKERYEQRAGTMSGGEQQMLAIGRALMSKPKLLLLDEP SLGLAPIIIQQIFEIIEQLRREGVTVFLVEQNANQALKLADRAYVLENGRIVMHDTGA ALLTNPKVRDAYLGG" misc_feature complement(1157957..1158655) /gene="braG" /locus_tag="PA1070" /note="ABC-type branched-chain amino acid transport system, ATPase component LivF [Amino acid transport and metabolism]; Region: LivF; COG0410" /db_xref="CDD:440179" gene complement(1158658..1159425) /gene="braF" /locus_tag="PA1071" /db_xref="GeneID:878078" CDS complement(1158658..1159425) /gene="braF" /locus_tag="PA1071" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_249762.1" /db_xref="GeneID:878078" /translation="MSRPILEVSGLTMRFGGLLAVNGVNLKVEEKQVVSMIGPNGAGK TTVFNCLTGFYQPTGGLIRLDGEEIQGLPGHKIARKGVVRTFQNVRLFKEMTAVENLL VAQHRHLNTNFLAGLFKTPAFRRSEREAMEYAAHWLEEVNLTEFANRSAGTLAYGQQR RLEIARCMMTRPRILMLDEPAAGLNPKETDDLKALIAKLRSEHNVTVLLIEHDMKLVM SISDHIVVINQGAPLADGTPEQIRDNPDVIKAYLGEA" misc_feature complement(1158661..1159425) /gene="braF" /locus_tag="PA1071" /note="leucine/isoleucine/valine transporter ATP-binding subunit; Provisional; Region: livG; PRK11300" /db_xref="CDD:183080" gene complement(1159422..1160675) /gene="braE" /locus_tag="PA1072" /db_xref="GeneID:880501" CDS complement(1159422..1160675) /gene="braE" /locus_tag="PA1072" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter permease BraE" /protein_id="NP_249763.1" /db_xref="GeneID:880501" /translation="MSQSLKRALFSALLVILVSYPILGLKLRTVGIKLEVLGADAQTL WTIAAAALAMFVWQLFRDRIPLKLGRGVGYKVNGSGLKNFLSLPSTQRWAVLALVVVA FVWPFFASRGAVDIATLILIYVMLGIGLNIVVGLAGLLDLGYVGFYAVGAYTYALLAE YAGFGFWTALPIAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRNMTEIT GGPNGIGSIPKPTLFGLTFERRAPEGMQTFHEFFGIAYNTNYKVILLYVVALLLVLLA LFVINRLMRMPIGRAWEALREDEVACRALGLNPTIVKLSAFTIGASFAGFAGSFFAAR QGLVTPESFTFIESAMILAIVVLGGMGSQLGVILAAVVMVLLQEMRGFNEYRMLIFGL TMIVMMIWRPQGLLPMQRPHLELKP" misc_feature complement(1159428..1160675) /gene="braE" /locus_tag="PA1072" /note="leucine/isoleucine/valine transporter permease subunit; Provisional; Region: livM; PRK11301" /db_xref="CDD:236896" gene complement(1160672..1161595) /gene="braD" /locus_tag="PA1073" /db_xref="GeneID:881243" CDS complement(1160672..1161595) /gene="braD" /locus_tag="PA1073" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter permease BraD" /protein_id="NP_249764.1" /db_xref="GeneID:881243" /translation="MPEIYHYLQQLVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGE VYMIGSYIAFIAITLLAMMGLDSVPLMMLAAFAASIIVTSAFGYSIERVAYRPLRGGN RLIPLISAIGMSIFLQNAVMLSQDSKEKAIPTLLPGNFVFGESSMNGVVISYMQILIF VVTFLVMFGLTLFISRSRLGRACRACAEDLKMTNLLGINSNNIIALTFVIGAALAAVA AVLLGMQYGVINPGIGFLAGIKAFTAAVLGGIGSIPGAMLGGLLLGVAEAFGADVFGD QYKDVVAFGLLILVLLFRPTGILGRPEVEKV" misc_feature complement(1160675..1161589) /gene="braD" /locus_tag="PA1073" /note="Transmembrane subunit (TM) of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which are involved in the uptake of branched-chain amino acids (AAs), as well as TMs of transporters involved in the uptake of...; Region: TM_PBP1_branched-chain-AA_like; cl00454" /db_xref="CDD:444914" misc_feature complement(1160969..1161025) /gene="braD" /locus_tag="PA1073" /note="TM-ABC transporter signature motif [active]" /db_xref="CDD:119324" protein_bind complement(1161424..1161436) /gene="braD" /locus_tag="PA1073" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1073" /bound_moiety="AmrZ" protein_bind complement(1161433..1161445) /gene="braD" /locus_tag="PA1073" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1073" /bound_moiety="AmrZ" gene complement(1161856..1162977) /gene="braC" /locus_tag="PA1074" /db_xref="GeneID:878501" CDS complement(1161856..1162977) /gene="braC" /locus_tag="PA1074" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter substrate-binding protein BraC" /protein_id="NP_249765.1" /db_xref="GeneID:878501" /translation="MKKGTQRLSRLFAAMAIAGFASYSMAADTIKIALAGPVTGPVAQ YGDMQRAGALMAIEQINKAGGVNGAQLEGVIYDDACDPKQAVAVANKVVNDGVKFVVG HVCSSSTQPATDIYEDEGVLMITPSATAPEITSRGYKLIFRTIGLDNMQGPVAGKFIA ERYKDKTIAVLHDKQQYGEGIATEVKKTVEDAGIKVAVFEGLNAGDKDFNALISKLKK AGVQFVYFGGYHPEMGLLLRQAKQAGLDARFMGPEGVGNSEITAIAGDASEGMLATLP RAFEQDPKNKALIDAFKAKNQDPSGIFVLPAYSAVTVIAKGIEKAGEADPEKVAEALR ANTFETPTGNLGFDEKGDLKNFDFTVYEWHKDATRTEVK" misc_feature complement(1161859..1162977) /gene="braC" /locus_tag="PA1074" /note="high-affinity branched-chain amino acid ABC transporter substrate-binding protein; Region: PRK15404" /db_xref="CDD:237959" misc_feature complement(order(1162219..1162221,1162291..1162293, 1162447..1162449,1162594..1162599,1162660..1162668)) /gene="braC" /locus_tag="PA1074" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:380565" gene 1163276..1163593 /locus_tag="PA1075" /db_xref="GeneID:879627" CDS 1163276..1163593 /locus_tag="PA1075" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249766.1" /db_xref="GeneID:879627" /translation="MTEQTSTLYAKLLGETAVISWAELQPFFARGALLQVDAALDLVE VAEALAGDDREKVAAWLSGGGLSKVGEDAAKDFLERDPTLWAVVVAPWVVIQERAEKA TLH" misc_feature 1163288..1163527 /locus_tag="PA1075" /note="Uncharacterized protein Ssr3000, DUF2288 family [Function unknown]; Region: Ssr3000; COG5626" /db_xref="CDD:444355" gene 1163660..1164022 /locus_tag="PA1076" /db_xref="GeneID:880359" CDS 1163660..1164022 /locus_tag="PA1076" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249767.1" /db_xref="GeneID:880359" /translation="MFEPGHLHLVSLPGLDQQDINIHIRYEVRQNAESGAYVHFDMDG EIDGKPFSDSFELPRDTAFNFASDATRVAQKHGLHPKFGAITRVHKEYDAMFEDIRAK LHAHPGEPVDLERIIRHE" misc_feature 1163660..1164007 /locus_tag="PA1076" /note="Domain of unknown function (DUF5064); Region: DUF5064; pfam16703" /db_xref="CDD:435530" gene 1164275..1164682 /gene="flgB" /locus_tag="PA1077" /db_xref="GeneID:877603" CDS 1164275..1164682 /gene="flgB" /locus_tag="PA1077" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgB" /protein_id="NP_249768.1" /db_xref="GeneID:877603" /translation="MSISFDRALGIHQQALSFRAQRAEVLANNLANADTPNYKARDLD FAAVLAEQKDKAAKGTFATRTTNERHIAAEGFGMGEGSLQYRIPVQPSIDQNTVDAQI EQANYAENAMHFQASFTFLNSKFKGLVSALRGE" misc_feature 1164287..1164673 /gene="flgB" /locus_tag="PA1077" /note="flagellar basal-body rod protein FlgB; Region: FlgB; TIGR01396" /db_xref="CDD:273598" gene 1164688..1165128 /gene="flgC" /locus_tag="PA1078" /db_xref="GeneID:879618" CDS 1164688..1165128 /gene="flgC" /locus_tag="PA1078" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar basal body rod protein FlgC" /protein_id="NP_249769.1" /db_xref="GeneID:879618" /translation="MSLASVFNIAGSGMSAQSTRLNTVASNIANAETVSSSVDKTYRA RHPVFSTMFQQAQGDSGSLFADQDSSGAGVQVLGIVEDQSSLMPRYEPNHPAADANGY VYYPNVNVVEEMADMISASRAFQTNAEMMNTAKQMMQKVLTLGQ" misc_feature 1164688..1165125 /gene="flgC" /locus_tag="PA1078" /note="flagellar basal body rod protein FlgC; Reviewed; Region: flgC; PRK05681" /db_xref="CDD:235556" gene 1165141..1165854 /gene="flgD" /locus_tag="PA1079" /db_xref="GeneID:878124" CDS 1165141..1165854 /gene="flgD" /locus_tag="PA1079" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar basal body rod modification protein" /protein_id="NP_249770.1" /db_xref="GeneID:878124" /translation="MSIDNVSGTSSNTGNVNGSKRAAGSGATETGQSVKGSSNLGKDE FLKLLVAQLKNQDPMSPQQNGEFIAQLAQFSTVEGVQSLNKSMESILSNYQSSQALQA SSLVGRKVIVATDKSVVDTKDTFKASLNLPVSSSNVWVNVYDDKGTVVNRINLGQQAA GSVSFMWDGKDSSGNIMPPGTYKFEAQTSIDGKTYGLQTYLPANVDSVTLGQNGGELM LNLAGLGSIALSKVQIIGQ" misc_feature 1165141..1165848 /gene="flgD" /locus_tag="PA1079" /note="flagellar hook assembly protein FlgD; Region: flgD; PRK06655" /db_xref="CDD:235847" protein_bind complement(1165779..1165791) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1080" /bound_moiety="AmrZ" gene 1165882..1167270 /gene="flgE" /locus_tag="PA1080" /db_xref="GeneID:878285" CDS 1165882..1167270 /gene="flgE" /locus_tag="PA1080" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar hook protein FlgE" /protein_id="NP_249771.1" /db_xref="GeneID:878285" /translation="MSFNIGLSGIQAASSGLNVTGNNIANAGTVGFKQSRAEFADVYA ASVLGSGSNPQGSGVLLSDVSQMFKQGNIDSTNSVLDLAINGNGFFVTSNNGAISYTR AGYFNTDKQDFIVDNNGYRLQGYAVGPNGQLQNGVVTDLKVERANQAPQATSSIQQSY NLNSTLKPPTVTPFDPSDAATYNSSSSLGIYDSQGNSHTMSQFFIKNEPDPNATPPIP ENSWTMKVLIDGVNPLDPSNKTPMSFNVTFDASGQMTSVRAPDGSTSGPGFSIDATTN VIQFSPATGNPPTPGTGWIPAASDGKTPPTYAWNGATGAASGISFDMRKTTQYSTAFA QSNPIQDGYTTGQLAGLEIDDTGVIFARYTNGQSKVQGQVVLANFANIQGLTPIGKTS WVQSSESGEPAVGAPRSGTLGALQSGALEASNVDISNELVNLIVHQRNYQANAKTIQT EDAVTQTIINLR" misc_feature 1165882..1167267 /gene="flgE" /locus_tag="PA1080" /note="Flagellar hook protein FlgE [Cell motility]; Region: FlgE; COG1749" /db_xref="CDD:441355" gene 1167488..1168237 /gene="flgF" /locus_tag="PA1081" /db_xref="GeneID:878576" CDS 1167488..1168237 /gene="flgF" /locus_tag="PA1081" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar basal body rod protein FlgF" /protein_id="NP_249772.1" /db_xref="GeneID:878576" /translation="MDKMLYVSMSGASQNTLAMRAHANNLANISTSGFRRDFEQARSM QVFGDSFPARVFAMSERPGTDFSHGSLQETGNELDIAIDGDGFVAVQAPDGSEAYVRT AGMHIDALGMLRTGDGLPVLGNGGPIAVPPEEKVEIGQDGTISIRALGENPNVVAVVD RIKLVNPNLKQMEKGTDGLLHYKPQPGEQAPLADANVKVVSGFLESSNVNAVEEMTAI LSLSRQFELHVKMMRTAEDDSAAMARVLQIS" misc_feature 1167488..1168234 /gene="flgF" /locus_tag="PA1081" /note="flagellar basal body rod protein FlgF; Reviewed; Region: flgF; PRK12640" /db_xref="CDD:183642" gene 1168284..1169069 /gene="flgG" /locus_tag="PA1082" /db_xref="GeneID:880935" CDS 1168284..1169069 /gene="flgG" /locus_tag="PA1082" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar basal body rod protein FlgG" /protein_id="NP_249773.1" /db_xref="GeneID:880935" /translation="MLSALWVSKTGLSAQDMNLTTISNNLANVSTTGFKRDRAEFQDL LYQIRRQPGGQSTQDSELPSGLQLGTGVRVVGTQKIFTPGSLQTTEQPLDMAVNGRGF FQVLLPDGTVSYTRDGSFHLNSDGQIVTSNGFALEPAIVVPNETQTFTVGQDGTVSVT TTGNAQPQVIGNIQTADFINPAGLQAIGNNLFLETGSSGAPQVGTPGLNGLGTVAQNT LENSNVNVVEELVNMITTQRAYEMNSKVISTADQMLSFVTQNL" misc_feature 1168284..1169066 /gene="flgG" /locus_tag="PA1082" /note="flagellar basal body rod protein FlgG; Provisional; Region: flgG; PRK12693" /db_xref="CDD:183687" gene 1169115..1169810 /gene="flgH" /locus_tag="PA1083" /db_xref="GeneID:879458" CDS 1169115..1169810 /gene="flgH" /locus_tag="PA1083" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar basal body L-ring protein" /protein_id="NP_249774.1" /db_xref="GeneID:879458" /translation="MNRLMIVSLLGIATALGGCVNPPPKPNDPYYAPVLPRTPLPAAQ NNGAIYQAGFEQNLYDDRKAFRVGDIITITLNEKTQASKKANSDIQKDSKTKMGLTSL FGSGMTTNNPIGGGDLSLSAEYGGSRDAKGDSQAGQSNSLTGSITVTVAEVLPNGILS VRGEKWMTLNTGNELVRIAGLVRADDIATDNTVSSTRVADARITYSGTGAFADASQPG WLDRFFLSPLWPF" misc_feature 1169139..1169798 /gene="flgH" /locus_tag="PA1083" /note="Flagellar basal body L-ring protein FlgH [Cell motility]; Region: FlgH; COG2063" /db_xref="CDD:441666" gene 1169822..1170931 /gene="flgI" /locus_tag="PA1084" /db_xref="GeneID:878536" CDS 1169822..1170931 /gene="flgI" /locus_tag="PA1084" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar basal body P-ring protein" /protein_id="NP_249775.1" /db_xref="GeneID:878536" /translation="MTKFKHLLALAALLLAAGAAQAERLKDIASIQGVRTNQLIGYGL VVGLSGSGDQTTQTPFTLQTFNNMLAQFGIKVPANVGNVQLKNVAAVSVHADLPPFAK PGQPIDVTVSSIGNAKSLRGGSLLMTPLKGIDGQVYAVAQGNLVVGGFDAEGRDGSKI TVNVPSAGRIPAGATVERAVPSGFDQGNSLTLNLNRPDFTTAKRIVDRINELLGPGVA HAVDGGSVRVSAPLDPNQRVDYLSILENLDVQPGEAVAKVIINSRTGTIVIGQNVKVS PAAVTHGSLTVSITEDPIVSQPGAFSNGQTAVVPRSRVNAEEETKPMFKFGPGTTLDD IVRAVNQVGAAPSDLMAILEALKQAGALQADLIVI" misc_feature 1169888..1170928 /gene="flgI" /locus_tag="PA1084" /note="Flagellar basal body P-ring protein FlgI [Cell motility]; Region: FlgI; COG1706" /db_xref="CDD:441312" gene 1170942..1172144 /gene="flgJ" /locus_tag="PA1085" /db_xref="GeneID:878578" CDS 1170942..1172144 /gene="flgJ" /locus_tag="PA1085" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="peptidoglycan hydrolase FlgJ" /protein_id="NP_249776.1" /db_xref="GeneID:878578" /translation="MDSRLLSGIGAGPDSGSYTDLNRLNQLKVGKDRDGEANIRKVAQ EFESLFLNEMLKSMRSANEALGDGNFMNSQTTKQYQDMYDQQLSVSLSKNAGGIGLAD VLVRQLSKMKQGSRGNGENPFARVAENGAGRWPSNPSAQAGKALPMPEAGRDDSKLLN QRRLALPGKLAERMLAGIVPSASPAASQMQSLGQDSYLPAQSYPAASRRGFSTDGVDS QGSRRIAQPPLARGKSMFASADEFIATMLPMAQKAAERIGVDARYLVAQAALETGWGK SIIRQQDGGSSHNLFGIKTGSRWDGASARALTTEYEGGKAVKEIAAFRSYSSFEQSFH DYVSFLQGNDRYQNALDSAANPERFMQELQRAGYATDPQYARKVAQIARQMQTYQAVA AAGTPPLG" misc_feature 1170978..1172129 /gene="flgJ" /locus_tag="PA1085" /note="flagellar assembly peptidoglycan hydrolase FlgJ; Region: flgJ; PRK05684" /db_xref="CDD:235559" gene 1172163..1174214 /gene="flgK" /locus_tag="PA1086" /db_xref="GeneID:878191" CDS 1172163..1174214 /gene="flgK" /locus_tag="PA1086" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar hook-associated protein FlgK" /protein_id="NP_249777.1" /db_xref="GeneID:878191" /translation="MSDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTR IPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQNSELNAFLGQIDQLNSLLADN TTGVSPAMQRFFSALQTAAQNPSSTEAREAVLAQAQGLSKTFNTLYDQLDKQNSLINQ QLGALTSQVNNLSQSVAEYNDAIAKAKSAGAVPNDLLDARDEAVRKLSEMVGVTAVTQ DDNSVSLFIGSGQPLVVGNTVSTLSVVPGLDDPTRYQVQLTLGDSTQNVTRLVSGGQM GGLLAYRDTVLDSSYNKLGQLALTFADTVNKQLGQGLDLAGKAGANLFGDINDPDITA LRVLAKNGNTGNVHANLNITDTSKLNSSDFRLDFDGTNFTARRLGDDASMQVTVSGTG PYTLSFKDANGVDQGFSVTLDQLPAAGDRFTLQPTRRGASDIETTLKNASQLAFAGSA RAEATTNNRGSGAIGQPNLVDGPSPIDPAVLQNAFGANGLPLSATVSADGKTYTMTSP LPAGWSYVDKDGNALPGSPTLNSGTSNSVRMAYTDPGSGQTYTYEFNLSNVPQTGDSF TLSFNKDGIADNRNALNLNALQTKPTVGGTDSTGSTYNDAYGGLVERVGTLTAQARAS ADASQTVLKQAQDSRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLIGAF R" misc_feature 1172166..1174208 /gene="flgK" /locus_tag="PA1086" /note="flagellar hook-associated protein FlgK; Validated; Region: flgK; PRK05683" /db_xref="CDD:235558" gene 1174240..1175559 /gene="flgL" /locus_tag="PA1087" /db_xref="GeneID:877768" CDS 1174240..1175559 /gene="flgL" /locus_tag="PA1087" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar hook-associated protein FlgL" /protein_id="NP_249778.1" /db_xref="GeneID:877768" /translation="MRISTIQAFNNSVSGISRNYADLTRTQAEISAGKRLLTPADDPV GAVRLLQLNQEQALNSQYKSGITAAKNSLQQEETILNSVGTVIHRIREIAVQAGNGGL DASDKNALATELAQREDELLNLLNSRDASGKYLFSGSQGDTQPFVRNPDGTYSYNGDE GQREVQIASSTFIAISDNGKILFESGSNANRVSTGKDAAGPDASGNPSDSSISLGLVT DKEAYDTVFPSSTPPLASDGVGIHFTDAKNYVVYDLKTIPPGYDWSTSDPNPPSFATL ASGKIDDNAQTSDFITFGGVKVQIDGEPQGGDTFSIKRQPDQEKRSLLNTVSDLRKAL LSAEDTPAGNLAIRDAVGVAISNLDSSNSQILTGQGRIGARMNVAESTETFIDDVTLV NTAVISQIQDLDYPEALSRLTLQSTIMDAAQQSFVKIRGLSLFNYLS" misc_feature 1174240..1175553 /gene="flgL" /locus_tag="PA1087" /note="flagellar hook-associated protein FlgL; Reviewed; Region: flgL; PRK08870" /db_xref="CDD:236345" gene 1175614..1176375 /locus_tag="PA1088" /db_xref="GeneID:878583" CDS 1175614..1176375 /locus_tag="PA1088" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249779.1" /db_xref="GeneID:878583" /translation="MTDKQRIKGRPVAIDYESTLAFFEGRAAREYRNALSSTMYQDQQ PELVEERDRREKLRVAPGLALGMARRVLDIGCGIGRWGWLLAEEAPQADYLGIDFSAA LVEKACDEARQRGYERLLFQRMSATDIRPAELALSPPYDLLLVSGLLIYLNDSDCQEL LRQALQLCAPGGRIYLREPVAVEQRLTLDRFFSKELEHEYSAVYRTVAELKDMLVQAG GGEGPAILEEDCLFAEALEKRVETRQYFMILQRRG" misc_feature 1175815..1176135 /locus_tag="PA1088" /note="Trans-aconitate methyltransferase [Energy production and conversion]; Region: Tam; COG4106" /db_xref="CDD:443282" gene 1176380..1176982 /locus_tag="PA1089" /db_xref="GeneID:880876" CDS 1176380..1176982 /locus_tag="PA1089" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249780.1" /db_xref="GeneID:880876" /translation="MRTAYCFDLDGTLTRQELLPLIASSVGLEDEIEVLTQATIDGFL PFDKSFKLRVRLLRDANLEWIHSALRQQVELDPHIQAFISARPRQCFVVTGNLDLWVE PVLERLGVRSFTSRARMRDGRLEGVEEILHKGDAVTSLRGEFERIVAVGEGMNDVPMF EAADLRVAYGGVHVPNRVLTGLSDFVVHEGEALCRLLNML" misc_feature 1176389..1176868 /locus_tag="PA1089" /note="Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; Region: HAD-SF-IB; TIGR01488" /db_xref="CDD:273653" misc_feature order(1176401..1176415,1176659..1176664,1176776..1176778, 1176830..1176835,1176842..1176847) /locus_tag="PA1089" /note="active site" /db_xref="CDD:319763" gene 1176958..1177620 /locus_tag="PA1090" /db_xref="GeneID:877914" CDS 1176958..1177620 /locus_tag="PA1090" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249781.1" /db_xref="GeneID:877914" /translation="MSPIEHAVISAAGIGSRLGLNKPKCLVEVGGKTLLAQHLERLAE IPNVWVVVGFQEELVIEQVRNLRRDAIIVRNPDFDRTNTLQSIHRVSRYLDRRFLAVD GDTFIENRSFERFLRAAAGQAGLIGVSRYTTSDGVRVLLDAGGEAVTAFTREPQHAYE WTGIAILRPDMVVDRPIYVYQALEPYLPLPAQELDAFDIDTASDLDMARRVHLNNWNL ND" misc_feature 1176973..1177587 /locus_tag="PA1090" /note="Choline kinase [Lipid transport and metabolism]; Region: COG1213" /db_xref="CDD:440826" gene 1177613..1182697 /gene="fgtA" /locus_tag="PA1091" /db_xref="GeneID:880939" CDS 1177613..1182697 /gene="fgtA" /locus_tag="PA1091" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="flagellar glycosyl transferase FgtA" /protein_id="NP_249782.1" /db_xref="GeneID:880939" /translation="MIEDSVSEPDRRDGGDAGKRLAWLQRQVLPVLEEGGAVWVSGLD GAPFAGGAHKVVEASVAGELPGNERFRLACLGGAVGGVADDWQAMRLLLRAVESLEDR GWLLLEEALSVSAAGACRSPQAQARLALSLGLRQVAELRLGAPDDGGRQRVLQLFRQD LAVARMQRYSGLRVACYGNMPFHYRSLRPLAECFEDSLLSLDIDEVMAWKPDVIAVAD GWSVEFWRDYCDAHNVLLVGMRHGSVTRYGFAEGTYRYADYLCGSAWDIDDTLASSVM PRNGFLLTGNAWCDEVFRLPARTPAENAPTILFAPTYNPEISAAVHLGERVVALIRKV YPASRIIIKPHPAIVQHEHAFVSDKDLFRDLMKLWREQSRTDPLVTLVDDPEASIAAS FAEADILLADRSSLIFEFMTLDRPILLFSREQRIARWAYNPEAPGNAWRDIGLEFADD EQLLDLLANAFTRHAESRDTQENRTQQLYGRFRDGRSVQRVAAAIAEAPRLQIVLDAR AAADGGQRLAEHYAACFAHRRIDLIAPSGAALPADVRRFDSWRAWCDAEAATLERRAS AVLLVEDDGQLLPGSAHQVSALLPAIAMGQLRHARLALEEREAGPAGETDWSARRLHR LLARLQPKPAWRLLAPALLREELADLPDEAEQPLWLRAVAAAEAPVEWPVGQLNLFAE EGLLRQGDVHMLCARARLRAVPCVSGLPLRQRQVVLQVTPFASQLYDRFPFQLRVCLN GQLFSRVSVEDARAKSLVLPFRGDERGGMTIELECDGSYPAFEGVSTPVSLLLQTAFQ PAPGDYCAALAAGAASPEAGEDLRSEYETWLHGREVEPARYRPFIDALRRDSRIEVLV LAEEAEDADLQRSLASIDGQALPAWRTRILGRAPAFARKGLAWLAEGGSAAERINLAA AASDADWLIVIHAGDELARSALLLLAEKIRTETALLCCYSDEDHVCDGRYEAPLLKPD FNLDLLRSYPYCGRSLAFQRAALLAQGGLQEGFGDLALQDFMFRLAEREGLDRIGHLA EVLYHSARAFGEWLASAAVRPFIASVVDEHLNRLGVPHRIEPGRLAVINRIAYDYPGT PAVSLLLPVGDSLSALQRSVESFLENTDYPSYELLLVASGPLAPDMAAWLEAVQGLGS EQIRVLSPQASSLAGCLNLCVAEARGEFLLSLGAGVVALRPDWLRELLNHGRRPEVGA VGGKLLGLDGTIREAGLVLGLGGTAGRAFAGEAGDSAGYMHRLLVVQNHTALSASCLL FKRSLHDELGGFDENDFAHGHADVDFSLRARQLGYLSVWTPYAILAQNGNVELPSVEA DESLYRRWLPALARDPAYNRNLSLEGAGFALERPEVPAWQPLFGRSPLPRVLAHPADP YGCGHYRVRQPFRALHDAGLLDGMLSESLLQPVALERLEVDSVILQRQISEEQLRAIS RMRSFNRAFRVYELDDYLPELPLKSLHRAEMPGDIRQILGRALGLADRFVVSTEPLAE AFRRMHGDIRVVPNRLPLPWWRDLSSRRRDAERPRVGWAGGIGHGGDLEVIAEVVREL ADEVDWVFFGFCPDALRPYVREYHPGVEIERYPAYLASLDLDLALAPLEQNRFNECKS NLRLLEYGVLGFPVICSDVLCYRDSLPVTRVKNRSRDWLEAIRAHLADADANAAAGAQ LREAVRRDWMLEGAHLEAWAAAWLPD" misc_feature <1178438..1179097 /gene="fgtA" /locus_tag="PA1091" /note="CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Region: Glyphos_transf; cl42225" /db_xref="CDD:478041" misc_feature <1178966..1180462 /gene="fgtA" /locus_tag="PA1091" /note="Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]; Region: PksD; COG3321" /db_xref="CDD:442550" misc_feature <1180343..1180717 /gene="fgtA" /locus_tag="PA1091" /note="Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Region: Glyco_tranf_GTA_type; cl11394" /db_xref="CDD:472172" misc_feature 1180874..>1181533 /gene="fgtA" /locus_tag="PA1091" /note="Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]; Region: WcaE; COG1216" /db_xref="CDD:440829" misc_feature 1181111..1181599 /gene="fgtA" /locus_tag="PA1091" /note="Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Region: Glyco_tranf_GTA_type; cl11394" /db_xref="CDD:472172" gene 1183058..1184524 /gene="fliC" /locus_tag="PA1092" /db_xref="GeneID:882052" CDS 1183058..1184524 /gene="fliC" /locus_tag="PA1092" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="B-type flagellin" /protein_id="NP_249783.1" /db_xref="GeneID:882052" /translation="MALTVNTNIASLNTQRNLNASSNDLNTSLQRLTTGYRINSAKDD AAGLQISNRLSNQISGLNVATRNANDGISLAQTAEGALQQSTNILQRIRDLALQSANG SNSDADRAALQKEVAAQQAELTRISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDIS LQNASASAIGSYQVGSNGAGTVASVAGTATASGIASGTVNLVGGGQVKNIAIAAGDSA KAIAEKMDGAIPNLSARARTVFTADVSGVTGGSLNFDVTVGSNTVSLAGVTSTQDLAD QLNSNSSKLGITASINDKGVLTITSATGENVKFGAQTGTATAGQVAVKVQGSDGKFEA AAKNVVAAGTAATTTIVTGYVQLNSPTAYSVSGTGTQASQVFGNASAAQKSSVASVDI STADGAQNAIAVVDNALAAIDAQRADLGAVQNRFKNTIDNLTNISENATNARSRIKDT DFAAETAALSKNQVLQQAGTAILAQANQLPQAVLSLLR" misc_feature 1183061..1184521 /gene="fliC" /locus_tag="PA1092" /note="polar flagellin E; Region: PRK08869" /db_xref="CDD:236344" misc_feature 1183823..1183966 /gene="fliC" /locus_tag="PA1092" /note="Flagellin hook IN motif; Region: Flagellin_IN; pfam07196" /db_xref="CDD:399878" gene 1184603..1184974 /locus_tag="PA1093" /db_xref="GeneID:881951" CDS 1184603..1184974 /locus_tag="PA1093" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249784.1" /db_xref="GeneID:881951" /translation="MDVGNITSLSTFKTGRAPEASGDIFAPRSAADGSGKPLPEVTAS REASESRDDLGLAVSDIQSFVQSVKRNLNFSIDDSSGQVVVKVIDGDSGEVVRQIPSE EVLKLAARLDDVHSVLFETRA" misc_feature 1184603..1184971 /locus_tag="PA1093" /note="Uncharacterized conserved protein, FlaG/YvyC family [General function prediction only]; Region: FlaG; COG1334" /db_xref="CDD:440945" gene 1185060..1186484 /gene="fliD" /locus_tag="PA1094" /db_xref="GeneID:881775" CDS 1185060..1186484 /gene="fliD" /locus_tag="PA1094" /note="flagellar capping protein FliD" /codon_start=1 /transl_table=11 /product="B-type flagellar hook-associated protein" /protein_id="NP_249785.1" /db_xref="GeneID:881775" /translation="MAGISIGVGSTDYTDLVNKMVNLEGAAKTNQLATLEKTTTTRLT ALGQFKSAISAFQTALTALNSNAVFMARTAKSSNEDILKASATQSAVAGTYQIQVNSL ATSSKIALQAIADPANAKFNSGTLNISVGDTKLPAITVDSSNNTLAGMRDAINQAGKE AGVSATIITDNSGSRLVLSSTKTGDGKDIKVEVSDDGSGGNTSLSQLAFDPATAPKLS DGAAAGYVTKAANGEITVDGLKRSIASNSVSDVIDGVSFDVKAVTEAGKPITLTVSRD DAGVKDNVKKFVEAYNTLTKFINEQTVVTKVGEDKNPVTGALLGDASVRALVNTMRSE LIASNENGSVRNLAALGITTTKDGTLEIDEKKLDKAISADFEGVASYFTGDTGLAKRL GDKMKPYTDAQGILDQRTTTLQKTLSNVDTQKADLAKRLAALQEKLTTQFNLLSAMQD EMTKRQKSITDNLASLPYGSGKKT" misc_feature 1185060..1186457 /gene="fliD" /locus_tag="PA1094" /note="Flagellar capping protein FliD [Cell motility]; Region: FliD; COG1345" /db_xref="CDD:440956" gene 1186606..1186986 /locus_tag="PA1095" /db_xref="GeneID:881896" CDS 1186606..1186986 /locus_tag="PA1095" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="B-type flagellar protein FliS" /protein_id="NP_249786.1" /db_xref="GeneID:881896" /translation="MYAMKAMKQYQQVSIEAQVSDANPHRLIQLLMQGGLERLAQARG AMEREQIPEKGILIGKAIGIIGGLREALDSERGGELAGNLDRLYEYMIARLVEANTSN DTSLLDEVSALLLEVKSGWDGISH" misc_feature 1186651..1186977 /locus_tag="PA1095" /note="Flagellin-specific chaperone FliS [Cell motility, Intracellular trafficking, secretion, and vesicular transport]; Region: FliS; COG1516" /db_xref="CDD:441125" misc_feature order(1186675..1186680,1186687..1186689,1186693..1186698, 1186705..1186707,1186783..1186785,1186792..1186797, 1186804..1186809,1186816..1186821,1186843..1186845, 1186852..1186854,1186861..1186869,1186873..1186875, 1186930..1186935,1186939..1186944,1186951..1186956, 1186963..1186968,1186972..1186977) /locus_tag="PA1095" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:294015" misc_feature 1186675..1186740 /locus_tag="PA1095" /note="coiled coil [structural motif]; Region: coiled coil" /db_xref="CDD:294015" misc_feature 1186756..1186821 /locus_tag="PA1095" /note="coiled coil [structural motif]; Region: coiled coil" /db_xref="CDD:294015" misc_feature 1186843..1186893 /locus_tag="PA1095" /note="coiled coil [structural motif]; Region: coiled coil" /db_xref="CDD:294015" misc_feature 1186918..1186974 /locus_tag="PA1095" /note="coiled coil [structural motif]; Region: coiled coil" /db_xref="CDD:294015" gene 1187009..1187305 /locus_tag="PA1096" /db_xref="GeneID:882066" CDS 1187009..1187305 /locus_tag="PA1096" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249787.1" /db_xref="GeneID:882066" /translation="MSQATQQLDETRLALADALQAGNWDAIGELDQVCQVKIDQAMHD DERDEQALRVSLEQLLSLYNDMLSACRQQREAIGAELTGLQRASKGAKVYQMFG" misc_feature 1187051..1187290 /locus_tag="PA1096" /note="Flagellar protein FliT; Region: FliT; pfam05400" /db_xref="CDD:461640" protein_bind complement(1187311..1187323) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1097" /bound_moiety="AmrZ" protein_bind 1187459..1187482 /experiment="Beta-gal reporter assay [PMID: 12218009]" /experiment="DNAse footprinting [PMID: 12218009]" /experiment="EMSA [PMID: 12218009]" /experiment="Site directed mutagenesis [PMID: 12218009]" /note="Transcription factor binding site for NP_249343.; Evidence of regulation for: PA1097" /bound_moiety="Vfr" gene 1187587..1189059 /gene="fleQ" /locus_tag="PA1097" /db_xref="GeneID:881960" CDS 1187587..1189059 /gene="fleQ" /locus_tag="PA1097" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator FleQ" /protein_id="NP_249788.1" /db_xref="GeneID:881960" /translation="MWRETKLLLIDDNLDRSRDLAVILNFLGEDQLTCNSEDWREVAA GLSNSREALCVLLGSVESKGGAVELLKQLASWDEYLPILLIGEPAPADWPEELRRRVL ASLEMPPSYNKLLDSLHRAQVYREMYDQARERGRSREPNLFRSLVGTSRAIQQVRQMM QQVADTDASVLILGESGTGKEVVARNLHYHSKRREGPFVPVNCGAIPAELLESELFGH EKGAFTGAITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQ NVDVRIIAATHKNLEKMIEDGTFREDLYYRLNVFPIEMAPLRERVEDIALLLNELISR MEHEKRGSIRFNSAAIMSLCRHDWPGNVRELANLVERLAIMHPYGVIGVGELPKKFRH VDDEDEQLASSLREELEERAAINAGLPGMDAPAMLPAEGLDLKDYLANLEQGLIQQAL DDAGGVVARAAERLRIRRTTLVEKMRKYGMSRRDDDLSDD" misc_feature 1187602..1187955 /gene="fleQ" /locus_tag="PA1097" /note="Flagellar regulatory protein FleQ; Region: FleQ; pfam06490" /db_xref="CDD:428975" misc_feature <1187950..1189026 /gene="fleQ" /locus_tag="PA1097" /note="RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:443041" gene 1189172..1190380 /gene="fleS" /locus_tag="PA1098" /db_xref="GeneID:878201" CDS 1189172..1190380 /gene="fleS" /locus_tag="PA1098" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_249789.1" /db_xref="GeneID:878201" /translation="MQPALNAFTEQPADTAEATSRAGLEQAFALFNQMSSQLSESYSL LEERVTELKGQLALVSAQRMEELAEKERLANRLQSLLDLLPGGVIVIDAHGVVREANP AALGLLGEPLVGMLWREVIARCFAPREDDGHEISLRDGRRLSIATRSLNGEPGQLILL NDLTDTRRLQEQLARHERLSALGRMVASLAHQIRTPLSAALLYAGHLSEQALPTDQQQ RFAGRLKERLHELEHQVRDMLVFARGELPLTDRVAPKALFDSLRAAAEVHVQGLQVRW QCEARGGELLCNRDTLVGTVLNLVENAIQACGPELRLKVHLYARADSLRLSVSDNGPG MDPATLARLGEPFFTTKTTGTGLGLAVVKAVARAHQGQLQLRSRPGRGTCATLILPLI PAAPLSAIQE" misc_feature 1189259..1190359 /gene="fleS" /locus_tag="PA1098" /note="Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms]; Region: NtrY; COG5000" /db_xref="CDD:444024" gene 1190385..1191806 /gene="fleR" /locus_tag="PA1099" /db_xref="GeneID:882087" CDS 1190385..1191806 /gene="fleR" /locus_tag="PA1099" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_249790.1" /db_xref="GeneID:882087" /translation="MAAKVLLVEDDRALREALSDTLLLGGHEFVAVDSAEAALPVLAR EAFSLVISDVNMPGMDGHQLLGLIRTRYPHLPVLLMTAYGAVDRAVEAMRQGAADYLV KPFEARALLDLVARHALGQLPGSEEDGPVALEPASRQLLELAARVARSDSTVLISGES GTGKEVLANYIHQQSPRAGKPFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQPGKF ELADGGTILLDEISEMPLGLQAKLLRVLQEREVERVGARKPINLDIRVLATTNRDLAA EVAAGRFREDLYYRLSVFPLAWRPLRERPADILPLAERLLRKHSRKMNLGAVALGPEA AQCLVRHAWPGNVRELDNAIQRALILQQGGLIQPADLCLTAPIGMPLAAPVPVPMPAM PPATPPSVEIPSPAAGQDASGALGDDLRRREFQVIIDTLRTERGRRKEAAERLGISPR TLRYKLAQMRDAGMDVEAYLYAI" misc_feature 1190385..1191758 /gene="fleR" /locus_tag="PA1099" /note="DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]; Region: AtoC; COG2204" /db_xref="CDD:441806" gene 1192053..1192382 /gene="fliE" /locus_tag="PA1100" /db_xref="GeneID:882031" CDS 1192053..1192382 /gene="fliE" /locus_tag="PA1100" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar hook-basal body complex protein FliE" /protein_id="NP_249791.1" /db_xref="GeneID:882031" /translation="MSQGVEFNRLMLEMRSMQMEAMAKAKPVQAPAEVGAPSFSEMLS QAVDKVNETQQASTAMANAFEVGQSGVDLTDVMIASQKASVSFQAMTQVRNKLVQAYQ DIMQMPV" misc_feature 1192053..1192379 /gene="fliE" /locus_tag="PA1100" /note="flagellar hook-basal body protein FliE; Reviewed; Region: fliE; PRK00253" /db_xref="CDD:178948" gene 1192405..1194201 /gene="fliF" /locus_tag="PA1101" /db_xref="GeneID:881927" CDS 1192405..1194201 /gene="fliF" /locus_tag="PA1101" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="flagellar MS-ring protein" /protein_id="NP_249792.1" /db_xref="GeneID:881927" /translation="MADALIDSQVPAKSGGAGMLKKSFPGLSFLDNLSEMTMLRQIGL LVGLAASVAIGFAVVLWSQQPDYKPLYGSLNGVDANRVVEALTAADIPYKVEPNSGAL LVKADDLGRARMKVASAGVAPTDNNVGFEILDKEQALGTSQFMEATNYRRGLEGELAR TVSSLNNVKAARVHLAIPKSSVFVRDDRKPSASVLVELYPGRSLEPSQVMAIVNLVAT SVPELDKSQVTVVDQKGNLLSDQQELSELTMAGKQFDFTRRMEGLLTQRVHNILQPVL GNGRYKAEVSADVDFSAVESTSEMYNPDQPALRSEQRNNEERQNSSGPQGVPGALSNQ PPGPASAPQQATASAPADYVAPGQPLKDANGQTIIDPKTGKPELAPYPTDKRDQTTRN YELDRSISYTKQQQGRLRRLSVAVVLDDQMKVDAKTGEVSHQPWSADELARFTRLVQD SVGYDASRGDSVSVINAPFAPAQAEEIDSIPFYSQPWFWDIVKQVLGVLFILVLVFGV LRPVLSNITGGGKGKSLAGGGGRDGDLALGESGLEGSLADDRVSIGGPSSILLPSPTE GYDAQLNAIKNLVAQDPGRVAQVVKEWINADE" misc_feature 1192486..1194195 /gene="fliF" /locus_tag="PA1101" /note="Flagellar biosynthesis/type III secretory pathway M-ring protein FliF/YscJ [Cell motility, Intracellular trafficking, secretion, and vesicular transport]; Region: FliF; COG1766" /db_xref="CDD:441372" protein_bind complement(1193030..1193042) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="'Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1101, PA1102'" /bound_moiety="AmrZ" protein_bind 1193047..1193059 /gene="fliF" /locus_tag="PA1101" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="'Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1101, PA1102'" /bound_moiety="AmrZ" gene 1194207..1195223 /gene="fliG" /locus_tag="PA1102" /db_xref="GeneID:882074" CDS 1194207..1195223 /gene="fliG" /locus_tag="PA1102" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliG" /protein_id="NP_249793.1" /db_xref="GeneID:882074" /translation="MSENRLAAKLTKVDKAAILLLSLGETDAAQVLRHMGPKEVQRVG VAMASMRNVHREQVEQVMGEFVEVVGDQTSLGVGADGYIRKMLTQALGEDKANNLIDR ILLGGSTSGLDSLKWMEPRAVADVIRYEHPQIQAIVVAYLDPDQAAEVLSHFDHKVRL DIVLRVSSLNTVQPSALKELNLILEKQFAGNSNATRTTMGGVKRAADIMNYLDSSIEG QLMDSIREVDEDLSGQIEDLMFVFDNLADVDDRGIQALLREVSSDVLVLALKGSDEAI REKVFKNMSKRAAELLRDDLEAKGPVRVSEVEGAQKEILTIARRMAESGDIVLGGKGG EEMI" misc_feature 1194207..1195217 /gene="fliG" /locus_tag="PA1102" /note="Flagellar motor switch protein FliG [Cell motility]; Region: FliG; COG1536" /db_xref="CDD:441145" gene 1195225..1196031 /locus_tag="PA1103" /db_xref="GeneID:880874" CDS 1195225..1196031 /locus_tag="PA1103" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="flagellar assembly protein FliH" /protein_id="NP_249794.1" /db_xref="GeneID:880874" /translation="MVPHDKDKDNPSELIRGKDVAAFGLWSLPSFDEPRDEPAVAAPQ VPAVAEPAPAPPAVEEVELETVKPPTLEEIEAIRQDAYNEGFATGERDGFHAGQLKAR QEAEEALKERLQSLERLMTQLLEPIAEQDALIEQGMVNLVNHVARQVIQRELHMDSSH VRQVLREALKLLPMGAANIRIHVNPQDFERVKALRERHEESWRILEDDSLLPGGCRIE TEHSRIDATIETRLAQAVKQLFEQQREQATHPLASDIRIDLDAPGDVDAP" misc_feature 1195246..1195959 /locus_tag="PA1103" /note="flagellar assembly protein FliH; Region: fliH; PRK05687" /db_xref="CDD:235562" gene 1196021..1197376 /gene="fliI" /locus_tag="PA1104" /db_xref="GeneID:882010" CDS 1196021..1197376 /gene="fliI" /locus_tag="PA1104" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellum-specific ATP synthase" /protein_id="NP_249795.1" /db_xref="GeneID:882010" /translation="MRLERTSFARRLEGYTEAVSLPAQPVVEGRLLRMVGLTLEAEGL QAAVGSRCNVINESGYHPVQVEAEVMGFSGSKVYLMPVGSLAGIAPGARVVPLPDTGR LPMGMSMLGRVLDGAGRALDGKGGMRAEDWVPMDGPTINPLKRHPISEPLDVGIRSIN GLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTRADIIVVGLIGERGREVKEFIDEILG EEGLKRSVVVASPADDAPLMRLRAAQYCTRIAEYFRDKGKNVLLLMDSLTRYAQAQRE IALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDPIAD AARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVVEAEHLRDAQRFKQLWSRYQ QSRDLISVGAYVAGGDPETDLAIARFPVMRQFLRQGLDESESLAESRARLASLLAGGQ A" misc_feature 1196021..1197373 /gene="fliI" /locus_tag="PA1104" /note="flagellar protein export ATPase FliI; Region: fliI; PRK05688" /db_xref="CDD:168181" gene 1197390..1197833 /gene="fliJ" /locus_tag="PA1105" /db_xref="GeneID:879381" CDS 1197390..1197833 /gene="fliJ" /locus_tag="PA1105" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis chaperone" /protein_id="NP_249796.1" /db_xref="GeneID:879381" /translation="MEKRAARLAPVVDMASKAERDAATQLGRCQQQLLAAQQKLAELE RYRNDYQQQWISQGQKGVSGQWLMNYQRFLSQLETAVAQQANSVTWHREAVDKARLNW QERYARLEGLRKLVERYLEEARQAEDKREQKQLDELAQRTRRQDD" misc_feature 1197396..1197824 /gene="fliJ" /locus_tag="PA1105" /note="flagella biosynthesis chaperone FliJ; Region: fliJ; PRK05689" /db_xref="CDD:235563" gene complement(1197838..1198551) /locus_tag="PA1106" /db_xref="GeneID:883059" CDS complement(1197838..1198551) /locus_tag="PA1106" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249797.1" /db_xref="GeneID:883059" /translation="MLKHLLVLTCALLASSSALAQVMARDLGDFELKLATSPTRSMAQ GLVTPGSSGSFHGGLDLSHESGWYIGNWTSNLDPGKPTEIDSYAGFKRPLNNRLGYEM GLIRYSRPEQPANDAAELYGGLSIFGSRLGAALSSDPGRNDTTLFADLGVNPPFGFDV TLKYGNHRLDNPASLSGGGYVSVFNDWSVNLSRPWLGIDLNLSYSGTSLTGSDCSAYS GHNSYCDTTFMLKASRPFF" misc_feature complement(1197844..1198551) /locus_tag="PA1106" /note="conserved hypothetical protein, proteobacterial; Region: gcw_chp; TIGR02001" /db_xref="CDD:273922" gene complement(1198750..1199946) /locus_tag="PA1107" /db_xref="GeneID:879373" CDS complement(1198750..1199946) /locus_tag="PA1107" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249798.1" /db_xref="GeneID:879373" /translation="MARTTLESIQHAIEVNSSLALPIALENLSRLTHLALLTVPFNLI HILVFSLKDFRPDLGHQLWRQEIMYAHGAMALLFGGIGLLALWLRRQPPKLWRMRLLI LLGGAGIIGFGVAIACIDQRITSNITPLLLACFACAMFILIRPAYAVPFYGLAMLAFE VAMDHAQADPQLRLSNQANGLTAFGLGLLLSLILWHGHVRNLRQQRKLELQRQELEEK NRQLEYLAGHDPLTGLFNRREFDQLVLMELARIARQPQPLSLLMVDLDHFKYINDRYG HPFGDEVIRHAANLLRGNTRSSDSVARLGGEEFLLLLPDTAEQQARSLAEKLRERLEG TPLATQDGVLCLTASFGVASLDGGGQASYEQLYSAADQALYRAKSSGRNRVEVIRLAS LAESLR" misc_feature complement(1198786..1199532) /locus_tag="PA1107" /note="GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants [Signal transduction mechanisms]; Region: GGDEF; COG2199" /db_xref="CDD:441801" protein_bind complement(1199907..1199919) /locus_tag="PA1107" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1107" /bound_moiety="AmrZ" protein_bind 1199967..1199979 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1107" /bound_moiety="AmrZ" gene complement(1200063..1201220) /locus_tag="PA1108" /db_xref="GeneID:883036" CDS complement(1200063..1201220) /locus_tag="PA1108" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_249799.1" /db_xref="GeneID:883036" /translation="MPDRPRPPLLLVLALLALPQVAETILSPALPALASHWRLDDATS QWTMALFFVGFAPGIWLWGWLADRLGRRPALLGGLGLAALATFGAWASTDYSYLLACR LVQGLGLATCSVTVQASLRDVLQGPALMSYFVTLGAVLAWSPAVGPLGGQWLADLGGH PAVFATLAVLLASLAALVVPAWPETRPLLAGTPEPATLAIFRRVLADRPLQTRALLVA VLNVLVFSFYAAGPFMVGDLPGLGFGWIGLAIAIAGSLGALLNRRLPRTWNSARRVRL GLALAAAGATAQTLLAAVGYAEGLYWALPALPIFIGFGVAIPNLLGPALHAYDDCRGR AGALFGLAYYLLIGLGLGASTLLPFDRPWPLAAYWSLLGLVALLLARRLPE" misc_feature complement(1200111..1201163) /locus_tag="PA1108" /note="Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_MdfA_MDR_like; cd17320" /db_xref="CDD:340878" misc_feature complement(order(1200189..1200191,1200537..1200539, 1200546..1200548,1200789..1200794,1200801..1200803, 1200894..1200896,1201065..1201070,1201077..1201079, 1201149..1201154,1201161..1201163)) /locus_tag="PA1108" /note="chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340878" gene 1201310..1202089 /locus_tag="PA1109" /db_xref="GeneID:883084" CDS 1201310..1202089 /locus_tag="PA1109" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249800.1" /db_xref="GeneID:883084" /translation="MPRYPYERVEDPDLARCPVVGLEVDSTGHRSDWHCHRRAQLLYM AAGSVTLYFAERICQLTPLQAAWLPAGVPHRTVLHGRFAYRSLYFEPSAFAELPDSVQ VLEVGPLMRELILRMTGWAADLQLEGPHLTLLRALFDELASAPAHAASLPMPRDARAL KVAEALLAQPALDWSIEAWGREVGASGRTLARLFTEQTGLGFSRWRTQARLFEARRRL AEGRSVTEVAHALGYASDSAFIAMYRRVCGQSPGRALRGLE" misc_feature 1201364..1201645 /locus_tag="PA1109" /note="AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain; Region: cupin_NimR-like_N; cd06124" /db_xref="CDD:380379" misc_feature 1201826..1202065 /locus_tag="PA1109" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene complement(1202094..1202804) /locus_tag="PA1110" /db_xref="GeneID:879317" CDS complement(1202094..1202804) /locus_tag="PA1110" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249801.1" /db_xref="GeneID:879317" /translation="MTDPIRLSKRLAELTACSRREAELYIEGGWVSVDGEVIEEPQFK VLDQRVELLPGARAETIEPATLLLHKPAGWRHDDFEGLLAAGRRWSDDPSPLRALKKH FARQRPTLALDSEASGLVVFSQQHGVLRKLVDDGARLEQEYLVEVAGDLAAGGLERLR HGLAYQGRRLSPCKVSWQNESHLRFALKDVLPGQLRFMCEREGLEVRSIRRLRIGALS LARLPLGEWRYLGLHERF" misc_feature complement(1202622..1202792) /locus_tag="PA1110" /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized...; Region: S4; cd00165" /db_xref="CDD:238095" misc_feature complement(order(1202673..1202696,1202715..1202717, 1202721..1202726,1202733..1202738,1202742..1202747, 1202751..1202756,1202787..1202789)) /locus_tag="PA1110" /note="RNA binding surface [nucleotide binding]; other site" /db_xref="CDD:238095" misc_feature complement(1202097..1202627) /locus_tag="PA1110" /note="Pseudouridine synthase, a subgroup of the RsuA family; Region: PSSA_1; cd02555" /db_xref="CDD:211329" misc_feature complement(order(1202217..1202219,1202466..1202477)) /locus_tag="PA1110" /note="active site" /db_xref="CDD:211329" gene 1202917..1203540 /locus_tag="PA1111" /db_xref="GeneID:883062" CDS 1202917..1203540 /locus_tag="PA1111" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249802.1" /db_xref="GeneID:883062" /translation="MQSRLIDGLEWDLDEDGSGGLCNVHGDKVHLRQGDMDGACGPYC LVMAMLVRGQLRRRQAKGLERVDSRSRYGRLMKALDQHGPLLRVGTTGVDLLELLAEI NDTEHFALKGEGRRLVRHTREYLEAGFPVVLGFHGRKGSDIRHWGLAIGMSERAFLLL DPAHDLPRGQAWNAVITSEAHGSRFGYRYINAKGTWAVTLKEMVALL" gene 1203633..1204781 /locus_tag="PA1112" /db_xref="GeneID:879409" CDS 1203633..1204781 /locus_tag="PA1112" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249803.1" /db_xref="GeneID:879409" /translation="MPGLSLNAILLSAVALLAPSVEAVDAGRHDSELGAVEVTPVVGG LAYPWAVAFLPDNQGILVTERPGSLRFVSPEGQLSAPLEGVPRVFASGQGGLLDVALS PGFAEDRLVYLTYAEAGEDGRAGTAAGRGRLSADKRRLEGFHVIFRQLPKLSSGHHFG SRLVFDGKGHLFIALGENNQRSTSQDLDKLQGKIVRLYPDGGVPKDNPFVGRADARPE IWSYGHRNQQGAALNPWTGRLWTHEHGPRGGDEINIPQAGGNYGWPLATHGINYTLLP IPEARGKAVEGTEAPHHVWEKSPAISGMAFYDAQRFPAWQHNLFIGALATQELIRLQL DGDRIVHEERLLGDLGVRIRDVRQGPDGYLYLLTDQKDGQLLRLGLAR" misc_feature 1203765..1204754 /locus_tag="PA1112" /note="Glucose / Sorbosone dehydrogenase; Region: GSDH; pfam07995" /db_xref="CDD:429776" gene complement(1204785..1205006) /locus_tag="PA1112a" /db_xref="GeneID:17373348" CDS complement(1204785..1205006) /locus_tag="PA1112a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719740.1" /db_xref="GeneID:17373348" /translation="MPGHPDPLHGVTLEKLLTELVAHHGWAELGKRVDIRCFRNDPSI KSSLAFLRKTPWAREKVEALYVQLKRNQG" misc_feature complement(1204791..1204991) /locus_tag="PA1112a" /note="Uncharacterized conserved protein, DUF2132 family [Function unknown]; Region: COG4628" /db_xref="CDD:443667" gene complement(1205031..1205330) /locus_tag="PA1112.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /db_xref="GeneID:9793387" ncRNA complement(1205031..1205330) /ncRNA_class="other" /locus_tag="PA1112.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:9793387" gene complement(1205107..1205298) /locus_tag="PA1112b" /db_xref="GeneID:17373349" CDS complement(1205107..1205298) /locus_tag="PA1112b" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719741.1" /db_xref="GeneID:17373349" /translation="MAIMKKTVAPKAAKPAPAVETRESIEAQVAAFLQAGGEIQKIAK GVSGQVYGPSRQITISKKR" gene 1205771..1207537 /locus_tag="PA1113" /db_xref="GeneID:882144" CDS 1205771..1207537 /locus_tag="PA1113" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein/permease" /protein_id="NP_249804.1" /db_xref="GeneID:882144" /translation="MPAILSSRQRIALRLAWRFMAPYRWRMLGALVALLFTAAITLSL GQGIRLLVDQGFLTASPELLNRYILLFFVLVLGLAVGTFVRFYLVSWIGERFVADIRK RVFDHLIELHPGFYETNRSSEIQSRLTADTTLLQTVIGSSLSMALRNALMLVGGVLLM FVTNAKLTSIVVLALPLVIAPILLFGRRVRSLSRESQDRVADVGSYVGETLGQIKTVQ AYNHQAQDRQRFAGTVERAFDTARKRIAQRAWLITVVIVLVLGAVGIMLWVGGRDVIA GSISAGELAAFVFYSLIVGMAFGTLSEVIGELQRAAGAAERIAELLRARSEIRPPAQP RKLAARVSGRIELQAVRFAYPTRPEHWAIDDISLAVEPGETLALVGPSGAGKSTLFDL LLRFFDPQQGRLLLDGQPIVELDPADLRRSFALVSQNPALFFGSVEENIRYGRPHASA AEVEAAARAAHAHEFILGLPQGYATHLGEGGIGLSGGQRQRLAIARALLVDAPVLLLD EATSALDAESEHLIQQALPGLMSGRTTLVIAHRLATVQSADRIAVIDQGRLVAIGSHA RLIAENPLYARLAELQFAAGGR" misc_feature 1205792..1207519 /locus_tag="PA1113" /note="ABC transporter, permease/ATP-binding protein; Region: MsbA_rel; TIGR02204" /db_xref="CDD:131259" gene complement(1207540..1207875) /locus_tag="PA1114" /db_xref="GeneID:879613" CDS complement(1207540..1207875) /locus_tag="PA1114" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249805.1" /db_xref="GeneID:879613" /translation="MKHLAFLALGGLLLAPLAEAASFDCEKAERADEKAICANRALND KDVEMSVKYRFLRGLFAMGGRGAMQDRQQDWLRERRRCGGDTDCLSRAYAQRIDELDK QYAGIDKPL" misc_feature complement(1207561..1207812) /locus_tag="PA1114" /note="Lysozyme inhibitor LprI [Defense mechanisms]; Region: LprI; COG4461" /db_xref="CDD:443559" gene complement(1207979..1210303) /locus_tag="PA1115" /db_xref="GeneID:878916" CDS complement(1207979..1210303) /locus_tag="PA1115" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249806.1" /db_xref="GeneID:878916" /translation="MRPLSRWLSSCGSLLALAALFLVVPLAGRYWLGWSTPFGYLSDL ALGSLLVLLLHRRSLWFALPVMLLWCLFLIGNAELVAAVGRMPEPSDLKYLLDPQFVS SSTQGGGLAHLPLALGLGGATLLCVLLWRRRGPRLPRYAYALPAAFLAAHVGLQYLRP SDADQWQQYNLPHKLLASALSSGQLAVEDWLADDRPDTPPDVAGLNQLDLSGTPLLAG GGRARNVLIVAMEGIPGAYIAANRAAINSSYHEAPMPRLSGWAERAMTTPDYVLHSHQ TIRGLYAMLCGDYSKLDSGTPKGVELLNNPARARECLPAQLRQHGFSTHFLQGAGLRF MAKDKVMPQMGFDKTLGRDWFRNTSYLEFPWGMDDKAFFEGAATYVKQLRQQKKPWML TLLTVGTHQPYSAPADYLARYPSAKQAAVAYLDDAIDAFLADLEKQGVLRDTLVVLTS DESHGVDQVRLASAWGFNLVLAPEQAALPPIKSGVYGHVDLAASVLDYFGYRVPAGIS GRSLFRDYASGREMMSYTNGMLRHHDGKDTFVECDFQQVCRRYRSEGFIADEAEFLGR FSGRQARLVSQRAAVLDHSVQQAGQLGQEFQFATHERIRLKPETHNDWTDNLIGAQYL EMPKNSRTTVTLKIRALQMDRNGARVTLKTKEFERDVPIPVPDIPRLLKGKPLDMSFT FDNPEARKAFSFHLLAEGRGIIEISDFHVVTAANPEPVESRSQVAEAAKEQPLLSTLK SLFANRPETEEAERADAPRERTVIPEQKALILSH" misc_feature complement(1208729..1210138) /locus_tag="PA1115" /note="Phosphoglycerol transferase MdoB/OpgB, AlkP superfamily [Cell wall/membrane/envelope biogenesis]; Region: MdoB; COG1368" /db_xref="CDD:440979" gene 1210558..1211397 /locus_tag="PA1116" /db_xref="GeneID:882157" CDS 1210558..1211397 /locus_tag="PA1116" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249807.1" /db_xref="GeneID:882157" /translation="MAVIGRFNSLQVVKHTEFGLYLDGTQHGEILLPKRYVPKDQPSE VGDWLNVFIYLDSDDRLIATTQTPKVQVGGFASLKVVEINRIGLFLDWGLPKDLLLPH SEEKRPLQVGDYCVVYVYLDKRTNRITATARLDRQLDNLPPRYSVGQAVDLLVVERTE MGFKAIIEGKHWGLIHKNEAFKFLRSGMREQGYIKELRADGKIALSLQPVGAEAAVEL SQQILARLLEAGGSLPLSDKSSPEDIHRLFGVSKGTFKKAIGGLYKKGLILIHPERIE LPR" misc_feature 1210591..1211388 /locus_tag="PA1116" /note="Predicted RNA-binding protein YitL, contains S1 domains, virulence factor B family [General function prediction only]; Region: CvfB; COG2996" /db_xref="CDD:442235" gene complement(1211407..1211781) /locus_tag="PA1117" /db_xref="GeneID:880044" CDS complement(1211407..1211781) /locus_tag="PA1117" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249808.1" /db_xref="GeneID:880044" /translation="MKLDKAAAIAQLNQALGMSVLDAGNTLLARFNKSKNVWWFDIPL SQLKAGKFLNLLLANPAGDAVEHLKVPTGFLRQQQDSLELRDKNARRPTLSLELSADP GKRLRDVRPGGAGLDFAPFLQP" gene complement(1211888..1212571) /locus_tag="PA1118" /db_xref="GeneID:880201" CDS complement(1211888..1212571) /locus_tag="PA1118" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249809.1" /db_xref="GeneID:880201" /translation="MLRKKPTIPADLPLAGAPGFTDRGYRPLPVRPRNRPSDDGRHAM NRHYYISDNLDELERLEAELEASGIATEQIHVLSEKDAETGQRHLHEVSPFMKKDVVR SGRVGLLVGLVLAIVAVAFAYASGWTETAAGWIPVIFLGAMLCAFCLWEGSFFGLQRT NRAFRPFEERLHQGQHLFFVDVKNAQEPILVNVVSHHPRLQDAGTGPAVSPLLLGWQQ RWRQFRRMV" gene complement(1212717..1213223) /gene="yfiB" /locus_tag="PA1119" /db_xref="GeneID:881938" CDS complement(1212717..1213223) /gene="yfiB" /locus_tag="PA1119" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249810.1" /db_xref="GeneID:881938" /translation="MLPQRLHPSRLLALALFSLVLGLAGCQTKPPQTGLSAEQIAVLQ EQGFELRDEGWEFGMSSKVLFGNNLDRLNPDSRNTLTKIARALLAVDIDKVRLEGHTD NYGDEGYNQKLSERRAESVAAVFREAGMPAANIEVRGLGMSKPVADNKTRAGRSENRR VAIIVPAE" misc_feature complement(1212729..1213196) /gene="yfiB" /locus_tag="PA1119" /note="OmpA family protein; Region: PRK09967" /db_xref="CDD:182172" gene complement(1213195..1214502) /gene="tpbB" /locus_tag="PA1120" /db_xref="GeneID:881684" CDS complement(1213195..1214502) /gene="tpbB" /locus_tag="PA1120" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="diguanylate cyclase" /protein_id="NP_249811.1" /db_xref="GeneID:881684" /translation="MNRRRRYTGSNPSLRRVLYRAHLGVALVAVFTAGLAVTLVGLLT LRAYADPNQQLIARSISYTVEAAVVFGDAQAAEESLALIASSEEVSSAIVYDRQGQTL ASWHRESTGPLHLLEQQLAHWLLSAPTEQPILHDGQKIGSVEVKGSGGSLLRFLLTGF AGMVLCLLLTALGAFYLSRRLVRGIVGPLDQLAKVAHTVRRERDFEKRVPEAGIAELS QLGEDFNALLDELESWQARLQDENASLAHQAHHDSLTSLPNRAFFEGRLSRALRDANE HREQLAVLFIDSDRFKEINDRLGHAAGDTVLVNIAMRIRGQLRESDLVARLGGDEFAV LLAPLASGADALRIADNIIASMQAPIRLSDGSTVSTSLTIGIALYPEHADTPAALLHD ADMAMYIAKRQARGSRRLAELNDPRILQEEKEIDSATPEAPPK" misc_feature complement(1213273..1214475) /gene="tpbB" /locus_tag="PA1120" /note="diguanylate cyclase DgcN; Region: PRK09966" /db_xref="CDD:182171" gene complement(1214502..1215074) /gene="yfiR" /locus_tag="PA1121" /db_xref="GeneID:877671" CDS complement(1214502..1215074) /gene="yfiR" /locus_tag="PA1121" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249812.1" /db_xref="GeneID:877671" /translation="MPSLPTLQPLDLYRRTLACLVLAVSCLGGGGLWADDARTSIEQR SNAVSQVLLGIFSYVRWPKEPAVLQLCVVGPTEYADGLLRGMVQANGRRVHAERRAVD NPDLGTLCNVIYLGVVDERERQQVFRSLAGHPVLSISERGTECSVGSMFCLNVGGPRI TFEANLDSIARSGVRVHPSVLKLARRQATP" misc_feature complement(1214520..1214933) /gene="yfiR" /locus_tag="PA1121" /note="YfiR/HmsC-like; Region: DUF4154; pfam13689" /db_xref="CDD:433405" gene 1215284..1215822 /locus_tag="PA1122" /pseudogene="unknown" /db_xref="GeneID:878310" gene complement(1216120..1216440) /locus_tag="PA1123" /db_xref="GeneID:880747" CDS complement(1216120..1216440) /locus_tag="PA1123" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249814.1" /db_xref="GeneID:880747" /translation="MSITSTDICQAADALKGFVGFNRKTGRYIVRFSEDSFGMDVADD SITPTSEFVWSSVRDDVMRLGREQLQILLEQNINERLNIGEPLLVYLRRQDLPEITAQ RQLR" misc_feature complement(1216126..1216440) /locus_tag="PA1123" /note="Protein of unknown function (DUF2025); Region: DUF2025; pfam09634" /db_xref="CDD:430728" gene 1216671..1218167 /gene="dgt" /locus_tag="PA1124" /db_xref="GeneID:880761" CDS 1216671..1218167 /gene="dgt" /locus_tag="PA1124" /EC_number="3.1.5.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="deoxyguanosinetriphosphate triphosphohydrolase" /protein_id="NP_249815.1" /db_xref="GeneID:880761" /translation="MPGAVDFKERISRQRPHDRETYGHAGNTDLQDIVYQLESDRGRI VNSAAVRRLQQKTQVFPLERNAAVRSRLTHSLEVQQTGRFIVRTLFRQLGPRAAEVGL DGLEGALESLVEMACLMHDVGNPPFGHFGEYAINDWFERNLDALFERRIPPGQGDGLL QQRMLTDLKHFEGNAQAIRLVVKLLRLNLTYTQTAGLLKYVRPAYEPKPDKAAANHYL NKKPGFYLSEEAFVDELRRVLGMRPGTRHPVAYIMEAADDISYCLADIEDSVEKGILD IRQLADLLVKKFAVHHSPDAPIPGDADNMSFQRMVDYSLEKAEREPINKVSEFFIRLR VKMIHPLVQHAAQQFIDNFEAVHAGTLGRALMEDGSLPHAIVQTFKDVAMEWVFCHPE VETLELQGYRIIQGLLDFYAPLLRLPAEEFQALAEGRQAAAPHPQLLVRRLPSQQIKA YLEAMKGVAEDPLQRQWEFYHRCRMLQDFVSGMTDQHAQDEYRALSAL" misc_feature 1216674..1218164 /gene="dgt" /locus_tag="PA1124" /note="deoxyguanosinetriphosphate triphosphohydrolase; Provisional; Region: dgt; PRK04926" /db_xref="CDD:235320" gene 1218181..1218933 /locus_tag="PA1125" /db_xref="GeneID:879981" CDS 1218181..1218933 /locus_tag="PA1125" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="NAD-dependent protein deacylase" /protein_id="NP_249816.1" /db_xref="GeneID:879981" /translation="MRAVVELLAGARRLVIFTGAGVSAESGIPTFRDALGGLWARYDP AALATPAAFADDPALVWGWYEWRRLKVLGVQPNPAHRAIAALSGRIANTRLVTQNVDD LHERAGSRDVLHLHGSLHAPRCATCAAAYRDALPDSVEPEEGRRIEPPRCPACGGQVR PGVVWFGEALPEAALREAFAAACECDLLLSVGTSGVVQPAARIPGLALEHGASVVHVN PQPVRTRHPREHCLVGPAGEVLPELLRRAFPG" misc_feature 1218214..1218912 /locus_tag="PA1125" /note="Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E. coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD...; Region: SIRT5_Af1_CobB; cd01412" /db_xref="CDD:238703" misc_feature order(1218241..1218243,1218247..1218252,1218271..1218276, 1218418..1218420,1218472..1218477,1218481..1218483, 1218526..1218528,1218754..1218756,1218769..1218771, 1218835..1218840,1218883..1218885) /locus_tag="PA1125" /note="NAD+ binding site [chemical binding]; other site" /db_xref="CDD:238703" misc_feature order(1218478..1218480,1218526..1218528,1218670..1218672, 1218676..1218690,1218766..1218774) /locus_tag="PA1125" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238703" misc_feature order(1218550..1218552,1218559..1218561,1218634..1218636, 1218643..1218645) /locus_tag="PA1125" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:238703" gene complement(1218940..1219527) /locus_tag="PA1126" /db_xref="GeneID:879182" CDS complement(1218940..1219527) /locus_tag="PA1126" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249817.1" /db_xref="GeneID:879182" /translation="MENVYKTPEAPLVETRGAKRAHFFVTSLGKMSVLFLVTLGLYGV YWMYKHWKAQQPQMERRISPVWRAIFGIFFFHALARRIHQALPEERQALWSPSEDATW AVLLTVAANLISHLTDVVPALEPYSLPSLLLLLTPLIPMRNIQRQANLASGDPQGTGN AGYSGYNLLFIVLGALYWLLILIGSAVILFGSSQG" misc_feature complement(1219279..1219449) /locus_tag="PA1126" /note="Domain of unknown function (DUF4234); Region: DUF4234; pfam14018" /db_xref="CDD:404834" gene complement(1219621..1220610) /locus_tag="PA1127" /db_xref="GeneID:879965" CDS complement(1219621..1220610) /locus_tag="PA1127" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_249818.1" /db_xref="GeneID:879965" /translation="MSVESIRIEGIDTPVSRIGLGTWAIGGWMWGGADDATSVETIRR AVESGINLIDTAPVYGFGHSEEVVGKALQGLRDKAVIATKAALEWSDAGIHRNASAAR IRREVEDSLRRLKTDRIDLYQIHWPDPLVAHEETAGELERLRRDGKILAIGVSNYSPE QMDGFRQFAPLASVQPPYNLFERAIDADVLPYAERNGIVVLAYGALCRGLLSGRMNAE TRFDGDDLRKSDPKFQQPRFAQYLAAVAQLEELARERYGKSVLALAIRWILDRGPTVA LWGARKPEQLNGIADAFGWRLDDEAMARIERILAETIQDPVGPEFMAPPSRNA" misc_feature complement(1219684..1220577) /locus_tag="PA1127" /note="Bacillus subtilis aldo-keto reductase YhdN and similar proteins; Region: AKR_AKR11B1; cd19148" /db_xref="CDD:381374" misc_feature complement(order(1219756..1219758,1219768..1219770, 1219774..1219782,1219828..1219830,1219930..1219932, 1219969..1219971,1219975..1219977,1219984..1220004, 1220086..1220088,1220143..1220148,1220359..1220361, 1220434..1220436,1220449..1220451,1220521..1220523, 1220542..1220550)) /locus_tag="PA1127" /note="active site" /db_xref="CDD:381374" misc_feature complement(order(1220236..1220238,1220359..1220361, 1220434..1220436,1220449..1220451)) /locus_tag="PA1127" /note="catalytic tetrad [active]" /db_xref="CDD:381374" protein_bind 1220000..1220012 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1220745..1221656 /locus_tag="PA1128" /db_xref="GeneID:879224" CDS 1220745..1221656 /locus_tag="PA1128" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249819.1" /db_xref="GeneID:879224" /translation="MPAFTRSELADLNVFMTIVRRRSFRHSAQELGVSTSALSHSMRN LEARLGVKLLNRTSRSVVPTDAGSALAAKLEDGFQVIGEALGELDAYRTSPVGRLRLN VPRDASRLLLGPVLRRFTEAYPDLQLELSVEDRMVDIVADGYDAGIRYGGTVPQDMVA VPLTGELRWVVAASPDYLARHGVPQRPDDLLRHACIRMRLGDNSFYKWELGDGERMVE VDVPGPFSVNESNTAVAAALDGVGLAYCLEVGIAEELRSGRLQLVLPDWTSMGAPFCL YYPSRRQPQPGLRQLMEMIRGDWLGRA" misc_feature 1220769..1220945 /locus_tag="PA1128" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 1221027..1221629 /locus_tag="PA1128" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold; Region: PBP2_CrgA_like_5; cd08474" /db_xref="CDD:176163" misc_feature order(1221063..1221065,1221075..1221077,1221192..1221194, 1221234..1221236,1221243..1221245,1221432..1221434, 1221483..1221485,1221564..1221566) /locus_tag="PA1128" /note="putative effector binding pocket [active]" /db_xref="CDD:176163" misc_feature order(1221066..1221071,1221081..1221086,1221090..1221095, 1221102..1221104,1221114..1221116,1221120..1221140, 1221324..1221326,1221414..1221428,1221447..1221452, 1221459..1221461) /locus_tag="PA1128" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176163" gene 1221691..1222098 /locus_tag="PA1129" /db_xref="GeneID:877785" CDS 1221691..1222098 /locus_tag="PA1129" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutathione transferase FosA" /protein_id="NP_249820.1" /db_xref="GeneID:877785" /translation="MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGS LWLCLSREPQYGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFL DPDGHRLEAHVGDLRSRLAACRQAPYAGMRFAD" misc_feature 1221700..1222065 /locus_tag="PA1129" /note="fosfomycin resistant protein subfamily FosA; Region: FosA; cd07244" /db_xref="CDD:319908" misc_feature order(1221700..1221723,1221766..1221768,1221775..1221792, 1221805..1221807,1221811..1221819,1221826..1221828, 1221838..1221840,1221874..1221897,1221907..1221909, 1221919..1221921,1222009..1222011,1222018..1222026, 1222030..1222038,1222045..1222050) /locus_tag="PA1129" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319908" misc_feature order(1221964..1221966,1221970..1221972,1221982..1221984, 1221988..1221990,1222045..1222047) /locus_tag="PA1129" /note="K binding site [ion binding]; other site" /db_xref="CDD:319908" gene complement(1222095..1223072) /gene="rhlC" /locus_tag="PA1130" /db_xref="GeneID:877665" CDS complement(1222095..1223072) /gene="rhlC" /locus_tag="PA1130" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="rhamnosyltransferase" /protein_id="NP_249821.1" /db_xref="GeneID:877665" /translation="MDRIDMGVLVVLFNPGDDDLEHLGELAAAFPQLRFLAVDNSPHS DPQRNARLRGQGIAVLHHGNRQGIAGAFNQGLDALFRRGVQGVLLLDQDSRPGGAFLA AQWRNLQARNGQACLLGPRIFDRGDRRFLPAIHLDGLTLRQLSLDGLTTPQRTSFLIS SGCLLTREAYQRLGHFDEELFIDHVDTEYSLRAQALDVPLYVDPRLVLEHRIGTRKTR RLGGLSLSAMNHAPLRRYYLARNGLLVLRRYARSSPLALLANLPTLTQGLAVLLLERD KLLKLRCLGWGLWDGLRGRGGALETNRPRLLKRLAGPAVASVASGKAKA" misc_feature complement(1222200..1223042) /gene="rhlC" /locus_tag="PA1130" /note="L-rhamnosyltransferase; Region: rhamnosyltran; TIGR01556" /db_xref="CDD:130619" misc_feature complement(order(1222794..1222796,1223034..1223036, 1223040..1223042)) /gene="rhlC" /locus_tag="PA1130" /note="Ligand binding site [active]" /db_xref="CDD:133017" gene complement(1223060..1224328) /locus_tag="PA1131" /db_xref="GeneID:878079" CDS complement(1223060..1224328) /locus_tag="PA1131" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_249822.1" /db_xref="GeneID:878079" /translation="MSTTSLCPSATREHGPGAKRVLPLLFLTCLLDAAGVGLIVPLLP TLIGSVAPLAVRDAATWGAALVMTFALLQLFFSPVLGSLSDRFGRRPVLVLAMLGFAL SYLLLALADSLWMLFLGRALAGLTGASVATAMACAADLGTHGQRTRHFGWLYAGLALG MILGPALGGLLAVHGTTLPLLLAAGLCLLNALLAGLFLEETLPPTRRRRLDPRRMNAL RSISGLARQPGVGRLLAVLALVFLGLQAVMVVWPFFVIEKFHWSSAWIGYSLALYGVL AVLAQTLGVNLCKRRLDDARLLRLGLALQGCGLLLFALVDSSFWLVCALLPFALGSLA TPAMQGLLSARVPVDRQGELQGVLSSLMSLAAIVGPPLMSGLFHWGSGPLAPLPLAGA PFLAGALLVLAGLVLAWQLRPTGEERSWTG" misc_feature complement(1223153..1224235) /locus_tag="PA1131" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" misc_feature complement(order(1223231..1223233,1223240..1223245, 1223252..1223257,1223264..1223266,1223312..1223314, 1223324..1223326,1223336..1223341,1223486..1223488, 1223498..1223500,1223582..1223584,1223591..1223599, 1223606..1223611,1223618..1223620,1223846..1223848, 1223855..1223860,1223867..1223869,1223924..1223926, 1223933..1223941,1223945..1223950,1224098..1224100, 1224209..1224211,1224218..1224223,1224230..1224235)) /locus_tag="PA1131" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340946" protein_bind complement(1224446..1224458) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1224641..1225330 /locus_tag="PA1132" /db_xref="GeneID:879186" CDS 1224641..1225330 /locus_tag="PA1132" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249823.1" /db_xref="GeneID:879186" /translation="MSSWFSMRAGDPPSFVTGVVGFENTGSNDPSTRLTLRFRDPASK THAAHVTTSSYSELFSLALTPRYYELYEFEVRYLSYTVTRETGAYEERCEANGEALEK TVQKRKRSVTHTAVNVESNCRSTPLTKTDYYYETYTSKPFSAPFRAESFATNYIGDFR VQCSYKEKKGKTLVDSCRLNYGAVSRDRVDAWVAQMNEADKDKREPLPPVRQQAVDTK KAGKLIHSVFR" gene complement(1225340..1225690) /locus_tag="PA1133" /db_xref="GeneID:878232" CDS complement(1225340..1225690) /locus_tag="PA1133" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249824.1" /db_xref="GeneID:878232" /translation="MALDPSQRRRLRHALSDAFVDTLLEPEDIARRIKGVDPALLERL FFEEVAPVCHGNLLSPAPAVWTAFDKAWLEEAIERRLARQRSSALRRWHERCLVAWLR WRYADTWRAIAGAL" gene complement(1225757..1226278) /locus_tag="PA1134" /db_xref="GeneID:879999" CDS complement(1225757..1226278) /locus_tag="PA1134" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249825.1" /db_xref="GeneID:879999" /translation="MTAQKENSDSTPTSRPPFPPLRFRACAQSRTQGGPLMSLPPYLQ PGDKVVLYDQHCRFCTLWSGFLARRADHRLKLLAAQSAEGLAILDWFGLAPDHFDTWL FVDGAYACDDNDALLEVLRLLPGPWRHLRWLRLLPAWLRDECHEALRRNRWRWFGRQR QPLRRRSWRPRRA" misc_feature complement(1225796..1226158) /locus_tag="PA1134" /note="Predicted thiol-disulfide oxidoreductase YuxK, DCC family [General function prediction only]; Region: YuxK; COG3011" /db_xref="CDD:442248" gene complement(1226427..1227302) /locus_tag="PA1135" /db_xref="GeneID:879881" CDS complement(1226427..1227302) /locus_tag="PA1135" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="molecular chaperone Hsp31/glyoxalase" /protein_id="NP_249826.1" /db_xref="GeneID:879881" /translation="MSNERDTSRTPTPDPAEHNAFFPSPYSLSQYTSAKTDFDGADYP TPYKGGKKVLMIGTDERYILMQNASMFSTGNHPVEMLLPMYHLDKAGFEFDVATLSGN PVKLEMWAMPGEDEAVKSIYAKYLPKLKAPRKLADLLEQAVADDSPYAAVFVPGGHGV LAGIPHSREVKRLLNAFLAKDRYIITLCHGPACLLAPAVEEKPEDYPFKGYEICVFPD ALDTGANLEIGYMPGPLPWLVGENLQKLGVKILNKGITGQVHRDRKLLTGDSPLASNN LGKLAAKTLLEAFAR" misc_feature complement(1226433..1227299) /locus_tag="PA1135" /note="protein deglycase HchA; Region: PRK04155" /db_xref="CDD:235228" misc_feature complement(1226739..1226741) /locus_tag="PA1135" /note="conserved cys residue [active]" /db_xref="CDD:153222" gene 1227474..1228205 /locus_tag="PA1136" /db_xref="GeneID:880377" CDS 1227474..1228205 /locus_tag="PA1136" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249827.1" /db_xref="GeneID:880377" /translation="MTDYASLLFDSVARLRKAATTEAVCREMVEFAARLGFDRVIVCS LFPRPDEDELIDELFFVHGDWAEGRSAQERDAYLLHCPVTRHILELDEPFFWSKSPSE DPERMTYRIVRGVRDLGQVNGMQVPVFGRNGLEGAVSFAGERLDLNAGCKLAAQAFCP ILFFALKRLRGPVSAGDAQALSEREREVLQWIALGKQQAEVAAILMISERTVENHLRA ARRRLGAASTAQAVARALRLGDIEV" misc_feature 1227486..1228196 /locus_tag="PA1136" /note="LuxR family transcriptional regulatory, chaperone HchA-associated; Region: reg_near_HchA; TIGR03541" /db_xref="CDD:132580" gene complement(1228212..1229198) /locus_tag="PA1137" /db_xref="GeneID:879111" CDS complement(1228212..1229198) /locus_tag="PA1137" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_249828.1" /db_xref="GeneID:879111" /translation="MTAIEIARPGGPEVLVATSRPLPTPGPREVLVEVRAAGVNGPDV LQRKGVYDPPPGASDIPGLEIAGTVRAVGSEVSRFAVGEAVMALIPGGGYAQFAVADE RTTLHLPDGLGMEEAAALPETFMTVWVNLFQRGGFKAGETLLVHGGASGIGTAATMLG KAFGAAKIFTTISSEAQREASLRLGADVAIDYTEQDFVEEVLRGTEGRGVDVIVDIVA GDYVTRNYQAAAMNGRIVQIGVIKGKAAEVDLFPMLSKRLVHLGSTLRSRSHDEKGAI IAELERQVWPHVRAGTVRPQVFRTFPLEQARQAHELMDSGQHIGKIVLTSAP" misc_feature complement(1228224..1229198) /locus_tag="PA1137" /note="putative NAD(P)H quinone oxidoreductase, PIG3 family; Region: quinone_pig3; TIGR02824" /db_xref="CDD:274316" misc_feature complement(order(1228245..1228247,1228260..1228262, 1228404..1228412,1228476..1228478,1228482..1228487, 1228548..1228553,1228623..1228625,1228668..1228670, 1228680..1228685,1228743..1228751,1228758..1228760, 1228812..1228814,1228821..1228823,1228833..1228835, 1229076..1229081)) /locus_tag="PA1137" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176180" gene 1229344..1230219 /locus_tag="PA1138" /db_xref="GeneID:880837" CDS 1229344..1230219 /locus_tag="PA1138" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249829.1" /db_xref="GeneID:880837" /translation="MNWDDTRVFLALCREHTLRGAARALHVDQATVGRRLASLEAALG STLFLRTSSGYLLTPAGEAAFELAEKMERSALELLRRTRGMDHRLSGEVRLSTTDSLA VDFVLPALARLHLEHPDIRVLLDSASAVVDLPKRETDIAIRTLRPENPDLILRKLASW PMGLFASADYLRRNGVPVPGERFRGHDLVMYEPYWHSQRELTLGGEPIRDGRVVIAVN SNMMVRQALARGLGLCELPLYMGERDGLVRVWPQRERRRPYEVWMVTHKDLRHTARVR AVIERLVEAFAEAPA" misc_feature 1229344..1230207 /locus_tag="PA1138" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 1230310..1231158 /locus_tag="PA1139" /db_xref="GeneID:880696" CDS 1230310..1231158 /locus_tag="PA1139" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249830.1" /db_xref="GeneID:880696" /translation="MAIPSIPRLAVLTLGLALAAAASAADEAQLVEAINAYRGQVQSC GGQASGELPPLAADPRLALPVNAAGDLQQAMAQAAYPMVNVQSISLSGPRDAGAAMKA LQESFCRVVLDPQFVDVGVSRQDRDWRIVLARPLLRGGMGDWQAEGQKLLERINAARG QARQCGGKPYAAAQPLAWNATLGGAAEAHSRAMANGNFFDHLDRDGRTPGDRAELAGY SGGLVGENIAAGQDGVDKVVDGWLASPGHCANLMNPGYRELGAAYATDPKSDAGIYWT AMFGSP" misc_feature 1230736..1231155 /locus_tag="PA1139" /note="Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain [Cell cycle control, cell division, chromosome partitioning, General function prediction only]; Region: YkwD; COG2340" /db_xref="CDD:441910" gene complement(1231256..1232092) /locus_tag="PA1140" /db_xref="GeneID:878039" CDS complement(1231256..1232092) /locus_tag="PA1140" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249831.1" /db_xref="GeneID:878039" /translation="MSKSSYYAPHGGHPAQTELLTDRAMFTEAYAVIPKGVMRDIVTS HLPFWDNMRMWVIARPLSGFAETFSQYIVELAPNGGSDKPEQDPNAEAVLFVVEGELS LTLQGQVHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIRKHYQKVDGVPLPEAFVTN EQDIQPLVMPDTEGRWSTTRFVDMSDMRHDMHVNIVNFEPGGVIPFAETHVMEHGLYV LEGKAVYRLNQDWVEVEAGDFMWLRAFCPQACYSGGPGRFRYLLYKDVNRHMRLTLNA PH" misc_feature complement(1231277..1232077) /locus_tag="PA1140" /note="bifunctional allantoicase/(S)-ureidoglycine aminohydrolase, UGLYAH2 family; Region: AAH_UGLYAH2; NF040771" /db_xref="CDD:468730" gene complement(1232229..1233131) /locus_tag="PA1141" /db_xref="GeneID:879554" CDS complement(1232229..1233131) /locus_tag="PA1141" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249832.1" /db_xref="GeneID:879554" /translation="MSDSEKSNSRLFDLDLLRAIVTVADCGSFTTAAARLHSTQSTVS QKVRRLEEMAGHRLLERGNRDVLPTDAGDTLLGYARRLLALNDELAEALSGATVALTV RIGVPDDFAAGRTTERLAAFNRRYPQVKLEVTSGMSRDLSASYDRGELDLVLLKQRRA SREALACWPEKTCWVDSARNPCIDLDPLPIVTFPPRGVYRDEMIAALEAVGRRWHISF TSSSLSGLQSAIADGMGIGLLPLRAVSAGHAVLPKNVGLPAVDVFEVALLHRPAADPM VKALARVLSRVLAEDTRSRPAFEK" misc_feature complement(1232262..1233098) /locus_tag="PA1141" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene complement(1233297..1234013) /locus_tag="PA1142" /db_xref="GeneID:878072" CDS complement(1233297..1234013) /locus_tag="PA1142" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249833.1" /db_xref="GeneID:878072" /translation="MRDEPSRPLTVIYQSLREQIERGLLARGSKLPSERQLSELFSTT RITLREALGQLEDQGLIYREERRGWFVSPQRLLYNPLVRSHFHAMVADQGRVPETEVL GAAMIPASVDICQRLELPALSRVFQIRRARRVDGRLVLYVEHYLNPAYFPGIERFDLT RSLTDLYANHYGIRYGRVRFEMVPTILPAEAAGPLRVSVGSPALQIVRVNRDQAGRLI DCDLEYWRHDALQVNVEVPE" misc_feature complement(1233306..1233980) /locus_tag="PA1142" /note="phosphonate utilization transcriptional regulator PhnR; Region: phnR; TIGR03337" /db_xref="CDD:132380" gene complement(1234095..1234748) /locus_tag="PA1143" /db_xref="GeneID:879850" CDS complement(1234095..1234748) /locus_tag="PA1143" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249834.1" /db_xref="GeneID:879850" /translation="MPLALFDLDDTLIDGDCATLWGRYMTELGWVEKTAFLHQERRLM ELYAEGRLAMEDYMDFSLAPIAGRTPAEIAGAVEDFVARIIAPRIHADALRCLERHRQ AGDRLLIISASAHFLVSAIGRRLGVDEVLAIDLEERDGLYTGRTRGTLTYREGKVRRL DAWLAQEGETLAGATFYSDSRNDLPLLSRVDRPHTVNPDPALLGHAREAGWPVLEWR" misc_feature complement(1234098..1234748) /locus_tag="PA1143" /note="Phosphoserine phosphatase [Amino acid transport and metabolism]; Region: SerB; COG0560" /db_xref="CDD:440326" gene complement(1234816..1236150) /locus_tag="PA1144" /db_xref="GeneID:877809" CDS complement(1234816..1236150) /locus_tag="PA1144" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_249835.1" /db_xref="GeneID:877809" /translation="MNNHNGTLHRGWQSLQRWRIQIFVITWLAYAAFYFTRKAFSVAK LGIAEDPSFELDKSAMADLDALYLAAYAVGQFMWGVFADRFGTRVVVLGGLLTSALAA LMMGTFATLPIFAACMVVQGLAQSTGWSGLCKNIGAFFATYERGRVLGLWSTCYAFGG LVATPFAGWCAYRLTHDWRMAFLSSAGVVLAVAVLFFFLQRNRPQDVGLPPVEAEAAP PANAPRPSHSGALLKALRNPHVLVLGIAYFLLKPARYAILLWGPVIIYERMPEIGKVA SAIVPSAFEVAGLAGPILIGLASDKLFGARRMPACVLSLAALTLSLALFVPAMQSGSL YLVVSLLFMMGVTLYGPDSMISGAAAIDFGTSEAAGTATGFVNGCGSVGAILGGLLPG YFDTLTVFFVFTATALLASLLLVPFWNSRPGACRVEPKAHASGPLLAAGKPR" misc_feature complement(1234897..1236096) /locus_tag="PA1144" /note="Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters; Region: MFS_OPA_SLC37; cd17312" /db_xref="CDD:340870" misc_feature complement(order(1234999..1235001,1235008..1235013, 1235020..1235025,1235032..1235034,1235083..1235085, 1235095..1235097,1235107..1235112,1235275..1235277, 1235287..1235289,1235374..1235376,1235383..1235391, 1235398..1235403,1235410..1235412,1235671..1235673, 1235680..1235685,1235692..1235694,1235752..1235754, 1235761..1235769,1235773..1235778,1235926..1235928, 1236028..1236030,1236037..1236042,1236049..1236054)) /locus_tag="PA1144" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340870" gene 1236644..1237546 /locus_tag="PA1145" /db_xref="GeneID:878264" CDS 1236644..1237546 /locus_tag="PA1145" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249836.1" /db_xref="GeneID:878264" /translation="MLRNVTDLDLRLLRIFACVVKCGGFTAAQAELNMSQSNISMHIA SLEKRLGYRLCERGKGGFRLTAKGRRVLEASRTMFDAIGLFRDQAQALSGRLVGELYL GLADNLATLPQARFGDALARFQRRDQDVQLNLFVNSPTELELAVIEGELDLAISYFSR SRPSLEYRPLYREEIGVFCGDRHPLFAEAQPTLERIAACDWVMHGFLPENLVLPLRPS RSRATAYHMEAVAHAVLAGTHLGYLPTHYAEAWIERGRMRALLPERLSYPVEHSMIVY AGRPLSEAARAFIDDLLQVHGLAS" misc_feature 1236665..1237525 /locus_tag="PA1145" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene complement(1237551..1238732) /locus_tag="PA1146" /db_xref="GeneID:878737" CDS complement(1237551..1238732) /locus_tag="PA1146" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="iron-containing alcohol dehydrogenase" /protein_id="NP_249837.1" /db_xref="GeneID:878737" /translation="MSDLHYWNYPTDILCGVGALEQLPRRCALAGARRPLLVTDPGMR ALEPLRLVRECLERAGIDHDLFHELSSNPSLAEVQGGARRFEAGGHDALIALGGGSAL DAAKGIALLSRDPHGLERFEWTQTLRSYPTLADYPPLGLPPLLALPTTAGTGSELGRE AVLTDTQLGIKRVVGHRELLAACVFLDPRLTRGLPPALSAATGMDALTHHLEALFSPL YHPMSAGIALEGVRLVRQHLENAVRDGNDLAAREGMLVASASAAVAFQKGLGGVHALA HPLGARHHLHHGLLNAVLLPYVLLANRPAIEADAARLARYLELDEASFDGLLAWILEL RARIGIPANLAALGLDGEDAQWVGEQALADLSSSATNALPLDARDYARIYRQAVAGTL A" misc_feature complement(1237569..1238711) /locus_tag="PA1146" /note="Iron-containing alcohol dehydrogenases-like; Region: Fe-ADH-like; cd14861" /db_xref="CDD:341483" misc_feature complement(order(1237872..1237874,1237902..1237904, 1237914..1237916,1238106..1238108,1238118..1238120, 1238139..1238141,1238163..1238165,1238217..1238222, 1238277..1238279,1238283..1238288,1238415..1238417, 1238424..1238426,1238433..1238441,1238613..1238615)) /locus_tag="PA1146" /note="putative active site [active]" /db_xref="CDD:341483" misc_feature complement(order(1237872..1237874,1237914..1237916, 1238106..1238108,1238118..1238120)) /locus_tag="PA1146" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:341483" gene complement(1238834..1240324) /locus_tag="PA1147" /db_xref="GeneID:879951" CDS complement(1238834..1240324) /locus_tag="PA1147" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_249838.1" /db_xref="GeneID:879951" /translation="MTDLRDTSRDERLLAAHGYRQELERGLSLWSSFSVGFATISPVV GIYSVMSLGAMSMGPSWVWVVPLCLLLQFGVALVYAELSSQFPLAGGCYQWVRRLVGD RLAWFTGFLYLASALASLTTVAYLGGFWLGLLATGAPPSANGQVLCGALLLALGLAVN LLGINPLKYFVNAGIVAEAIASIGIGVLLLLFFRNHPLDLLFSGPGGTGDADGSYLDG VLTALAVGGWAFLGFDACSQISEETTDARVSTPRAILRSMLVVGFTVMLTAFAVTLSY QDIGAVVSGQVVDPVTPAVVDAFGAWAERPFVAVVLIAFVACVVSVQTYIGRAIFGMA RDAILPGSALLRRVDRRKVPMAAMVCSTLLASLGLALGLNATAVGTLIAFGSGGFFVV FLIVAACALWARLVGRWDPDKGALRLGRAGLAVNVLAVAWLSFEALNVAWPRASLAPP DAPWFQVWAVVVVFSALAAFGLLYMVIAKPHRRIATSLSFAAPPAD" misc_feature complement(1238999..1240279) /locus_tag="PA1147" /note="Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; Region: PotE; COG0531" /db_xref="CDD:440297" gene complement(1240584..1242500) /gene="toxA" /locus_tag="PA1148" /db_xref="GeneID:877850" CDS complement(1240584..1242500) /gene="toxA" /locus_tag="PA1148" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="exotoxin A" /protein_id="NP_249839.1" /db_xref="GeneID:877850" /translation="MHLTPHWIPLVASLGLLAGGSFASAAEEAFDLWNECAKACVLDL KDGVRSSRMSVDPAIADTNGQGVLHYSMVLEGGNDALKLAIDNALSITSDGLTIRLEG GVEPNKPVRYSYTRQARGSWSLNWLVPIGHEKPSNIKVFIHELNAGNQLSHMSPIYTI EMGDELLAKLARDATFFVRAHESNEMQPTLAISHAGVSVVMAQAQPRREKRWSEWASG KVLCLLDPLDGVYNYLAQQRCNLDDTWEGKIYRVLAGNPAKHDLDIKPTVISHRLHFP EGGSLAALTAHQACHLPLETFTRHRQPRGWEQLEQCGYPVQRLVALYLAARLSWNQVD QVIRNALASPGSGGDLGEAIREQPEQARLALTLAAAESERFVRQGTGNDEAGAASADV VSLTCPVAAGECAGPADSGDALLERNYPTGAEFLGDGGDISFSTRGTQNWTVERLLQA HRQLEERGYVFVGYHGTFLEAAQSIVFGGVRARSQDLDAIWRGFYIAGDPALAYGYAQ DQEPDARGRIRNGALLRVYVPRSSLPGFYRTGLTLAAPEAAGEVERLIGHPLPLRLDA ITGPEEEGGRLETILGWPLAERTVVIPSAIPTDPRNVGGDLDPSSIPDKEQAISALPD YASQPGKPPREDLK" misc_feature complement(1241676..1242422) /gene="toxA" /locus_tag="PA1148" /note="Exotoxin A binding; Region: Exotox-A_bind; pfam09101" /db_xref="CDD:286224" misc_feature complement(1241280..1241672) /gene="toxA" /locus_tag="PA1148" /note="Exotoxin A, targeting; Region: Exotox-A_target; pfam09102" /db_xref="CDD:401151" misc_feature complement(1240647..1241162) /gene="toxA" /locus_tag="PA1148" /note="Exotoxin A catalytic; Region: Exotox-A_cataly; pfam09009" /db_xref="CDD:430368" misc_feature complement(order(1240752..1240754,1240767..1240769, 1240983..1240985,1241013..1241021,1241058..1241063, 1241067..1241069,1241076..1241078,1241088..1241090, 1241097..1241111)) /gene="toxA" /locus_tag="PA1148" /note="nad+ binding pocket [chemical binding]; other site" /db_xref="CDD:238716" gene complement(1242750..1243118) /locus_tag="PA1149" /db_xref="GeneID:878272" CDS complement(1242750..1243118) /locus_tag="PA1149" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249840.1" /db_xref="GeneID:878272" /translation="MDAKALLLGSLCLAAPFADAATLDNALSACLAARLGAPHTAEGQ LHLPLTLEARRSTGECGCTSALVRYRLLARGASADSLVLQEGLLDSRQDTPRTLTLAA DAGLASGRELVVTLGCQAPD" misc_feature complement(1242756..1243103) /locus_tag="PA1149" /note="Uncharacterized protein conserved in bacteria (DUF2195); Region: DUF2195; cl02042" /db_xref="CDD:470444" protein_bind complement(1242888..1242897) /locus_tag="PA1149" /experiment="Beta-gal reporter assay [PMID: 22844393]" /experiment="DNAse footprinting [PMID: 22844393]" /experiment="EMSA [PMID: 22844393]" /experiment="Isothermal titration calorimetry [PMID: 22844393]" /note="Transcription factor binding site for NP_250948.; Evidence of regulation for: PA1148" /bound_moiety="PtxR" gene 1243594..1245663 /gene="pys2" /locus_tag="PA1150" /db_xref="GeneID:878080" CDS 1243594..1245663 /gene="pys2" /locus_tag="PA1150" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyocin-S2" /protein_id="NP_249841.1" /db_xref="GeneID:878080" /translation="MAVNDYEPGSMVITHVQGGGRDIIQYIPARSSYGTPPFVPPGPS PYVGTGMQEYRKLRSTLDKSHSELKKNLKNETLKEVDELKSEAGLPGKAVSANDIRDE KSIVDALMDAKAKSLKAIEDRPANLYTASDFPQKSESMYQSQLLASRKFYGEFLDRHM SELAKAYSADIYKAQIAILKQTSQELENKARSLEAEAQRAAAEVEADYKARKANVEKK VQSELDQAGNALPQLTNPTPEQWLERATQLVTQAIANKKKLQTANNALIAKAPNALEK QKATYNADLLVDEIASLQARLDKLNAETARRKEIARQAAIRAANTYAMPANGSVVATA AGRGLIQVAQGAASLAQAISDAIAVLGRVLASAPSVMAVGFASLTYSSRTAEQWQDQT PDSVRYALGMDAAKLGLPPSVNLNAVAKASGTVDLPMRLTNEARGNTTTLSVVSTDGV SVPKAVPVRMAAYNATTGLYEVTVPSTTAEAPPLILTWTPASPPGNQNPSSTTPVVPK PVPVYEGATLTPVKATPETYPGVITLPEDLIIGFPADSGIKPIYVMFRDPRDVPGAAT GKGQPVSGNWLGAASQGEGAPIPSQIADKLRGKTFKNWRDFREQFWIAVANDPELSKQ FNPGSLAVMRDGGAPYVRESEQAGGRIKIEIHHKVRIADGGGVYNMGNLVAVTPKRHI EIHKGGK" misc_feature 1244836..1245255 /gene="pys2" /locus_tag="PA1150" /note="S-type Pyocin; Region: Pyocin_S; pfam06958" /db_xref="CDD:399737" misc_feature <1245535..1245648 /gene="pys2" /locus_tag="PA1150" /note="HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and...; Region: HNHc; cd00085" /db_xref="CDD:238038" misc_feature order(1245553..1245555,1245559..1245567,1245571..1245573, 1245607..1245612,1245622..1245627,1245634..1245636, 1245646..1245648) /gene="pys2" /locus_tag="PA1150" /note="active site" /db_xref="CDD:238038" gene 1245665..1245928 /gene="imm2" /locus_tag="PA1151" /db_xref="GeneID:879819" CDS 1245665..1245928 /gene="imm2" /locus_tag="PA1151" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyocin-S2 immunity protein" /protein_id="NP_249842.1" /db_xref="GeneID:879819" /translation="MKSKISEYTEKEFLEFVKDIYTNNKKKFPTEESHIQAVLEFKKL TEHPSGSDLLYYPNENREDSPAGVVKEVKEWRASKGLPGFKAG" misc_feature 1245668..1245919 /gene="imm2" /locus_tag="PA1151" /note="inhibitory immunity (Im) protein of colicin (Col) deoxyribonuclease (DNase) and pyocins; Region: Col_Im_like; cd16363" /db_xref="CDD:319897" misc_feature order(1245725..1245730,1245755..1245757,1245764..1245769, 1245776..1245781,1245788..1245790,1245809..1245820, 1245824..1245835,1245851..1245853) /gene="imm2" /locus_tag="PA1151" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:319897" gene complement(1247932..1248486) /locus_tag="PA1153" /db_xref="GeneID:878620" CDS complement(1247932..1248486) /locus_tag="PA1153" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249844.1" /db_xref="GeneID:878620" /translation="MSDTLLQPSRFTHHHRVLRAVLLDEEGWFVLSDLVRLLGRYLGG RAPAALCDEAPWPLATAEQRERLFALCHALERHLDTDQWRLAWLHDERHGPRQDCLVS ESGLYALLWLAAPGAARGLRRWVSGSVLPRLRSQSRPNATPQRAVLHWKTAEIDTLHW QGKTWIPLSDCPQLLDSPRPLIRA" misc_feature complement(1248085..1248486) /locus_tag="PA1153" /note="Prophage antirepressor [Mobilome: prophages, transposons]; Region: COG3617" /db_xref="CDD:442835" gene complement(1249019..1249552) /locus_tag="PA1154" /db_xref="GeneID:877656" CDS complement(1249019..1249552) /locus_tag="PA1154" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249845.1" /db_xref="GeneID:877656" /translation="MPSYRRTWVPGGTYFFTVTLHDRRSNLLTREIDLLRRVVAQTRR RHPFRIDAWVVLPEHMHCLWTLPPDDADFATRWKVIKSGFARRIPCHESRTFAQRRRG QRAIWQQRYWEHLIRNDTDYRRHFDYIHLNPVKHGLVTAVKDWPFSTFHRAVADGLYP EDWAGDPSLEVRAAERV" misc_feature complement(1249115..1249552) /locus_tag="PA1154" /note="REP element-mobilizing transposase RayT [Mobilome: prophages, transposons]; Region: RAYT; COG1943" /db_xref="CDD:441546" gene complement(1249907..1251154) /gene="nrdB" /locus_tag="PA1155" /db_xref="GeneID:877692" CDS complement(1249907..1251154) /gene="nrdB" /locus_tag="PA1155" /EC_number="1.17.4.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribonucleotide-diphosphate reductase subunit beta" /protein_id="NP_249846.1" /db_xref="GeneID:877692" /translation="MLSWDEFDKEDPTEAKAAPAAAQAVAQGHDKLDDEAAGSVEEAR AVSADDSDAVARAKKALNDLDIQEGLDDLEGSAARVQVGDKQMINARADLNQLVPFKY DWAWQKYLDGCANHWMPQEVNMNADIALWKSKDGLSEDERRIVMRNLGFFSTADSLVA NNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIESLGMDEGEIFNMYHEIPSV AKKASWGLKYTRSISDPMFQTGTPETDRQFLRNLIAYYCVLEGIFFYCGFTQILSMGR RNKMTGTAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQL EIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDL KKEKNFFETRVIEYQTGGALSWD" misc_feature complement(1249910..1251004) /gene="nrdB" /locus_tag="PA1155" /note="ribonucleotide-diphosphate reductase subunit beta; Validated; Region: PRK07209" /db_xref="CDD:235968" misc_feature complement(order(1250516..1250518,1250525..1250530, 1250570..1250572,1250579..1250581,1250588..1250593, 1250600..1250602,1250609..1250614,1250816..1250818, 1250837..1250839,1250870..1250872)) /gene="nrdB" /locus_tag="PA1155" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:153108" misc_feature complement(order(1250264..1250266,1250276..1250281, 1250573..1250575,1250585..1250587,1250594..1250596, 1250687..1250689,1250804..1250806)) /gene="nrdB" /locus_tag="PA1155" /note="putative radical transfer pathway [active]" /db_xref="CDD:153108" misc_feature complement(order(1250264..1250266,1250273..1250275, 1250375..1250377,1250585..1250587,1250594..1250596, 1250687..1250689)) /gene="nrdB" /locus_tag="PA1155" /note="diiron center [ion binding]; other site" /db_xref="CDD:153108" misc_feature complement(1250573..1250575) /gene="nrdB" /locus_tag="PA1155" /note="tyrosyl radical; other site" /db_xref="CDD:153108" gene complement(1251418..1254309) /gene="nrdA" /locus_tag="PA1156" /db_xref="GeneID:877716" CDS complement(1251418..1254309) /gene="nrdA" /locus_tag="PA1156" /EC_number="1.17.4.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribonucleotide-diphosphate reductase subunit alpha" /protein_id="NP_249847.1" /db_xref="GeneID:877716" /translation="MHTDTTRENPQASAPQAADSSQDLAATAPGQLRVIKRNGTVVPY TDDKITVAITKAFLAVEGGTAAASSRIHDTVRRLTEQVTATFKRRMPSGGTIHIEEIQ DQVELALMRAGEQKVARDYVIYREARAAERKNAGAASDVAQPHPSIRITRADGSLSPL DMGRLNTIISEACEGLAEVDGALIERETLKNLYDGVAEKDVNTALVMTARTLVEREPN YSYVTARLLMDTLRAEALGFLGVAESATHHEMAELYAKALPAYIEKGAEFELVDAKLK EFDLEKLGKAIDHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQIFFMRVAMGLAIEE KDREARAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYGAIHDN AMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAV CAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGSWTLFSPSD VPDLHDLYGKAFEERYEYYEALASYGKLKLHKVVQAKDLWRKMLSMLFETGHPWLTFK DPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLVNHIVDGKLDTAKLE KTVKTAVRMLDNVIDINYYSVPQAQNSNFKHRPVGLGIMGFQDALYLQHIPYGSDAAI AFADQSMEAISYYAIQASCDLADERGAYQTFQGSLWSQGILPIDSEKKLIEERGAKYI EVDLSETLDWAPLRERVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNL SGEFTVINPYLVRDLKARGLWDPVMVNDLKYYDGSVQQIERIPQDLKDLYATAFEVET RWIVEAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWFRGLKTTYYLRALAATST EKSTINTGKLNAVSAGGNDGLQAAPAAEPKPAPVPQACSIDNPDCEACQ" misc_feature complement(1251421..1254306) /gene="nrdA" /locus_tag="PA1156" /note="ribonucleoside-diphosphate reductase subunit alpha; Region: PRK07207" /db_xref="CDD:235966" gene 1255042..1255752 /locus_tag="PA1157" /db_xref="GeneID:879028" CDS 1255042..1255752 /locus_tag="PA1157" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_249848.1" /db_xref="GeneID:879028" /translation="MEQEAWRILIVEDDRRLAELTREYLEGNGLKVDIEANGALAAAR ILAERPDLVVLDLMLPGEDGLSICRQVRPQFDGPILMLTARTDDMDEVLGLEMGADDY VCKPVRPRVLLARIRALLRRSEAPEAGAPAADSKRLAFGRLVIDNAMREAWLDGTTIE LTSAEFDLLWLLAANAGRILSREEIFNALRGIEYDGQDRSIDVRISRIRPKIGDDPMH PRLIKTVRSKGYLFVGEG" misc_feature 1255060..1255740 /locus_tag="PA1157" /note="DNA-binding transcriptional regulator RstA; Provisional; Region: PRK10701" /db_xref="CDD:236738" gene 1256094..1257452 /locus_tag="PA1158" /db_xref="GeneID:878647" CDS 1256094..1257452 /locus_tag="PA1158" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_249849.1" /db_xref="GeneID:878647" /translation="MDGRSRARLMNGQVLVKQTAEHAVTVYTQASAAENLVLSGEVQQ VSEQLARATVYLLMDELVRYPASEQPYHLARIVRDKRFGFPVHLLQVKELDLDDDQRR RVVEGDTVMALGKDGDSIRIFAGILDTPWVLELGPLFQMNPYPPQLLLLLGALCLSFI GLITYLLVRRLEQRLRSLEAAATRIARGSLDTRVEVRGGDSVGRLGAAFNHMAEHIHR LLTVQREMVRAVSHELRTPVARLRFGLEMIETAETDGARLKYLEGMDNDIQDLDKLVD EMLTYARLEQGSPPLTYQRLELGVLVRQVVEEIAPLRREVLVSCEEGALVPEELGSWI EAEPRYLHRALQNLLTNALRHADRRVRISYRVSLERCRVDVEDDGPGVPEAQWERLFT PFLRLDDSRTRASGGHGLGLSIVRRIVYWHGGRASIGRSETLGGACFTLAWPRKAGLR DR" misc_feature 1256220..1257446 /locus_tag="PA1158" /note="sensor protein RstB; Provisional; Region: PRK10604" /db_xref="CDD:236724" protein_bind 1257515..1257530 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA1159" /bound_moiety="LasR" protein_bind 1257585..1257600 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA1159" /bound_moiety="LasR" gene 1257772..1257981 /locus_tag="PA1159" /db_xref="GeneID:877579" CDS 1257772..1257981 /locus_tag="PA1159" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cold-shock protein" /protein_id="NP_249850.1" /db_xref="GeneID:877579" /translation="MADREVGTVKWFNDAKGYGFIQRDSGPDVFVHYRAIRGEGHRSL VEGQKVEFSVIQGQKGLQAEDVSKV" misc_feature 1257790..1257978 /locus_tag="PA1159" /note="Cold shock protein, CspA family [Transcription]; Region: CspC; COG1278" /db_xref="CDD:440889" gene complement(1258087..1258470) /locus_tag="PA1160" /db_xref="GeneID:879610" CDS complement(1258087..1258470) /locus_tag="PA1160" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249851.1" /db_xref="GeneID:879610" /translation="MRQPDIEIYLKDAEHAAVAAWLEQALGPCGPWQEHGQTLKCTAR GEHGAVRVTWLPKAVGKWHSLFLESDSTPWDDDLACARAAHAALGVEIRCAPGGWEEN QGEEDADRWLRVDAGGVEEITWRTA" gene complement(1258488..1259291) /gene="rrmA" /locus_tag="PA1161" /db_xref="GeneID:877757" CDS complement(1258488..1259291) /gene="rrmA" /locus_tag="PA1161" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="rRNA methyltransferase" /protein_id="NP_249852.1" /db_xref="GeneID:877757" /translation="MLICPLCSAALGEVDNGVACPAGHRFDRARQGYLNLLPVQHKKS LDPGDNAAMVEARRQFLGAGHYAPLARRLAELAAERAPRRWLDIGCGEGYYSARLGEA LAGAEGYALDISREAVKRACRRAPQLSWLVASMARLPLADASCELIASVFSPIDWNEA VRILSPGGGVLRLGPASAHLLELRQRLYDDVRDYADDKHLAGLPAQLRLRHTETLEFR LALDSYDARENLLAMTPHGWRVNPERRARILAEPFEVSVAVRYDWLQRD" misc_feature complement(1258536..1259285) /gene="rrmA" /locus_tag="PA1161" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases; cl17173" /db_xref="CDD:473071" misc_feature complement(order(1258839..1258841,1258887..1258895, 1258953..1258958,1259010..1259030)) /gene="rrmA" /locus_tag="PA1161" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(1259291..1260442) /gene="dapE" /locus_tag="PA1162" /db_xref="GeneID:877783" CDS complement(1259291..1260442) /gene="dapE" /locus_tag="PA1162" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="succinyl-diaminopimelate desuccinylase" /protein_id="NP_249853.1" /db_xref="GeneID:877783" /translation="MTASSPSLSPTLELACELIRRPSVTPLDADCQALMMRRLEAAGF ALEPMRIEEVDNFWARRGGDGPVLCFAGHTDVVPTGPLQAWQHQPFDALIDDQGMLCG RGAADMKGSLASMIVAVERFVADHPEHKGAIAFLITSDEEGPAHHGTKAVVERLAARG ERLDWCIVGEPSSTSLVGDVVKNGRRGSLGAKLTIRGVQGHVAYPHLAKNPIHLAAPA LAELAAEHWDDGNAFFPPTSFQVSNLNSGTGATNVIPGELTALFNFRFSTESTVEGLQ KRVEAILDKHGLDWHVEWALSGLPFLTEPGELLDAVAASIRAVTGRETQPSTSGGTSD GRFIATMGTQVVELGPVNATIHQVNERVLASDLELLTEIYYQTLVRLLA" misc_feature complement(1259294..1260418) /gene="dapE" /locus_tag="PA1162" /note="succinyl-diaminopimelate desuccinylase; Reviewed; Region: PRK13009" /db_xref="CDD:237265" misc_feature complement(order(1259453..1259455,1259648..1259650, 1259654..1259656,1259678..1259683,1259702..1259725, 1259729..1259731,1259774..1259776,1259783..1259788, 1259792..1259797,1259804..1259809,1259813..1259815, 1259831..1259842,1259873..1259875)) /gene="dapE" /locus_tag="PA1162" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:349886" gene complement(1260557..1263166) /gene="ndvB" /locus_tag="PA1163" /db_xref="GeneID:877810" CDS complement(1260557..1263166) /gene="ndvB" /locus_tag="PA1163" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="glycosyl transferase" /protein_id="NP_249854.1" /db_xref="GeneID:877810" /translation="MSSRKIGLNLVVIVALAALFTGIWALYNRPVSVPDWPERISGFS FSPFRLNQNPQSGRYPSAEQMRTDLELVARHTHSIRTYSVQGALGDIPALAEAFGLRV SLGIWLGPDLASNEAEIARAIRIANESPSVVRVIVGNEALFRREVTAEQLIAYLDRVR AAVKVPVTTAEQWHVYREHPELAQHVDLIAAHVLPYWEATPVADAVDFVLERARELKA AFPRKPLLLAEVGWPSNGRMRGSAEATPADQAIYLRRLTNALNGEGYSYFVIEAFDQP WKVSAEGSVGAYWGVYNADRKAKFNFTGPVVPIPKWRALAIASAVLAVLAFTLLLIDS SSLRQRGRTFLAVVSFACASVLVWIAYDYSQQYSTWFSLTVGALLGVGALGVVIVLFT EAHELAEAVWTRKRRRPFLPITAARAYRPKVSIHVPCYNEPPELLKQTLDALARLDYP DYEVLVIDNNTRDPAVWQPVEAHCARLGERFRFFHVAPLEGFKAGALNFALGHVAADV EVVAVIDADYCVDPDWLRHMVPHFGDPRIAVVQSPQDYRDQHESAFKRLCYAEYKGFF HIGMVTRNDRDAIIEHGTMTMIRRSVLDELRWPEWCITEDAELGLRVFEKGLSAAYFE RSYGKGVMPDTFIDFKKQRFRWAYGAIQIMKRHTDALLRGRGPDGSRLTRGQRYHFVA GWLPWIADGLNIFFTLGALLWSAAMIIVPKRVDPPLLIFAILPLALFVFKVGKILFLY RRTVGVDLRDSFFAALAGLSLSHTIAKAVLYGFVTRGIPFFRTPKMRSSHGLLVALAE AREEVFVMLLLWGAAAGIVAVQGVPSRDLLIWVAMLLVQSLPYLAALVMALLSSLPKP REELAGGAEQIGG" misc_feature complement(1261664..1263157) /gene="ndvB" /locus_tag="PA1163" /note="Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism]; Region: Scw11; COG5309" /db_xref="CDD:444107" misc_feature complement(1261196..1261897) /gene="ndvB" /locus_tag="PA1163" /note="Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Region: Glyco_tranf_GTA_type; cl11394" /db_xref="CDD:472172" misc_feature complement(order(1261616..1261618,1261622..1261624, 1261796..1261798,1261877..1261879,1261883..1261885)) /gene="ndvB" /locus_tag="PA1163" /note="active site" /db_xref="CDD:132997" misc_feature complement(1260869..>1261384) /gene="ndvB" /locus_tag="PA1163" /note="cellulose synthase; Region: PLN02189" /db_xref="CDD:215121" gene 1263378..1264190 /locus_tag="PA1164" /db_xref="GeneID:878058" CDS 1263378..1264190 /locus_tag="PA1164" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249855.1" /db_xref="GeneID:878058" /translation="MQVDEQRFGGIGRLYGREGLQRLADSHVAVVGIGGVGSWAAEAL ARSGVGEISLFDLDDVCVTNTNRQVHAIEGSVGKAKVEVMAARILAINPACRVHAVAD FVTRETMAEYIVDFDYLIDCIDSVAAKAALIAWCKRRKIPVITTGGAGGQVDPTQIQV ADLNKTFNDPLAAKVRSTLRRDYNFSRTPGRTYSVPCVFSSEQLRYPKPDGTVCQSKS FVGEGVKLDCAGGFGAVMMVTATFGMVAAARAVERLAEGRALRPSRRTPGNA" misc_feature 1263390..1264154 /locus_tag="PA1164" /note="tRNA A37 threonylcarbamoyladenosine dehydratase [Translation, ribosomal structure and biogenesis]; Region: TcdA; COG1179" /db_xref="CDD:440792" gene complement(1264191..1264919) /gene="pcpS" /locus_tag="PA1165" /db_xref="GeneID:878433" CDS complement(1264191..1264919) /gene="pcpS" /locus_tag="PA1165" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="4'-phosphopantetheinyl transferase" /protein_id="NP_249856.1" /db_xref="GeneID:878433" /translation="MRAMNDRLPSFCTPLDDRWPLPVALPGVQLRSTRFDPALLQPGD FALAGIQPPANILRAVAKRQAEFLAGRLCARAALFALDGRAQTPAVGEDRAPVWPAAI SGSITHGDRWAAALVAARGDWRGLGLDVETLLEAERARYLHGEILTEGERLRFADDLE RRTGLLVTLAFSLKESLFKALYPLVGKRFYFEHAELLEWRADGQARLRLLTDLSPEWR HGSELDAQFAVLDGRLLSLVAVGA" misc_feature complement(1264200..1264811) /gene="pcpS" /locus_tag="PA1165" /note="4'-phosphopantetheinyl transferase EntD (siderophore biosynthesis) [Secondary metabolites biosynthesis, transport and catabolism]; Region: EntD; COG2977" /db_xref="CDD:442216" gene complement(1265147..1265935) /locus_tag="PA1166" /db_xref="GeneID:878458" CDS complement(1265147..1265935) /locus_tag="PA1166" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249857.1" /db_xref="GeneID:878458" /translation="MRLLCALLLIACAASVQAAIQTREMPYRSADGTRMVGYFAYDDS KPGIRPGVIVVHEWWGLNDYAKRRARDLAELGYSALAIDMYGEGKHTEHPQDAMAFMQ AATRDADAAKARFLAGLELLKRQPQTDPSQIAAIGYCFGGKIVLDMARQGLPLAGVAS FHGALGTATPASKGSVKAKILVEHGSADSLVPAKDLDALKQELSAAGADYRVVIQDGA KHGFTNPDADAHKGHGLDIGYDRQADRRSWADLQAFLKDIFGQG" misc_feature complement(1265168..1265878) /locus_tag="PA1166" /note="Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism]; Region: DLH; COG0412" /db_xref="CDD:440181" gene 1266111..1266782 /locus_tag="PA1167" /db_xref="GeneID:878215" CDS 1266111..1266782 /locus_tag="PA1167" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249858.1" /db_xref="GeneID:878215" /translation="MPDLSTWNLTIPQGRPAITISTSQLQRDYRSDYFQRTADGIRFW VPVNGSHTRNSEFPRSELRETLSSGRPYNWRYARADNWLEATLRIEAVPSTRRMIIGQ IHSDGSNSGQAAPLVKLLYQLRLDQGRVQALVRERPDDGGTRAYTLMDGIPLGQPFSY RIGVSRSGLLSVSVNGSALEQQLDPQWAYQGLYFKAGLYLQDNRGPSSEGGRATFSEL RVSHQ" misc_feature 1266117..1266776 /locus_tag="PA1167" /note="Alginate lyase; Region: Alginate_lyase2; pfam08787" /db_xref="CDD:400923" gene 1267282..1267602 /locus_tag="PA1168" /db_xref="GeneID:877589" CDS 1267282..1267602 /locus_tag="PA1168" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249859.1" /db_xref="GeneID:877589" /translation="MKNQVNALAVLSVGEIEQVSGAGTFLGDAIINGVYAANSFLNSP LFSSIGNAASAIGLNRTHELVDLLAFQVPSVAAITVGKILGGTDNHNVPLHYNKESGE GLYS" gene 1267680..1269737 /locus_tag="PA1169" /db_xref="GeneID:879547" CDS 1267680..1269737 /locus_tag="PA1169" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="arachidonate 15-lipoxygenase" /protein_id="NP_249860.1" /db_xref="GeneID:879547" /translation="MKRRSVLLSGVALSGTALANDSIFFSPLKYLGAEQQRSIDASRS LLDNLIPPSLPQYDNLAGKLARRAVLTSKKLVYVWTENFGNVKGVPMARSVPLGELPN VDWLLKTAGVIVELIVNFVASLPASAAAQFERIATGLSGDLEAARQVHEALLEEAKND PAAAGSLLLRFTELQTRVIAILTRVGLLVDDILKSASNLVTQRGQGDGLNRFRAVFGT LRLPEVADSFRDDEAFAYWRVAGPNPLLIRRVDALPANFPLGEEQFRRVMGADDSLLE AAASRRLYLLDYAELGKLAPSGAVDKLLTGTGFAYAPIALFALGKDRARLLPVAIQCG QDPATHPMFVRPAESESDLYWGWQMAKTVVQVAEENYHEMFVHLAQTHLVSEAFCLAT QRTLAPSHPLHVLLAPHFEGTLFINEGAARILLPSAGFIDVMFAAPIQDTQATAGGNR LGFDFYRGMLPESLKARNVDDPLALPDYPYRDDGLLVWNAIRQWAADYVAVYYASDGD VTADVELAAWVGEVIGSGKVAGFRPITGRSQLVEVLTMVIFTASAQHAAVNFPQPSMM TYAPAICAMSAAPAPDSPSGKSEADWLKMMPPTLVALEKVNIYHLLGSVYHGRLGDYR QTGFPYAPVFSDRRVTASGGPLERFQARLKEVEATIRTRNQARRRPYEYLLPSRIPAS TNI" misc_feature <1268340..1269707 /locus_tag="PA1169" /note="Region: Lipoxygenase; pfam00305" /db_xref="CDD:459754" gene complement(1269781..1270515) /locus_tag="PA1170" /db_xref="GeneID:880306" CDS complement(1269781..1270515) /locus_tag="PA1170" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249861.1" /db_xref="GeneID:880306" /translation="MIHWLSDPTFWTALLQIVAIDILLGGDNAVVIALACRHLPAHRR KQAIFGGVAGAILIRILLLFFALHLLDLPYLKVIGALLLLWIGIKLLLPEEENGDDIK GSTHLLGAIKTIIIADAVMSLDNVIALSAASAGDFFLVSLGVLISIPIIVWGSQLILR LIDRFPLIILFGGGLLGWIAGGMLLTDSALKPWLAPYAQWDSYLHYGAAAFGALFVIL LGSLLARRQLKQRHAAPADAAESEGR" misc_feature complement(1269955..1270479) /locus_tag="PA1170" /note="integral membrane protein, YjbE family; Region: R_switched_YjbE; TIGR03717" /db_xref="CDD:163429" gene 1270972..1272168 /locus_tag="PA1171" /db_xref="GeneID:880763" CDS 1270972..1272168 /locus_tag="PA1171" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transglycosylase" /protein_id="NP_249862.1" /db_xref="GeneID:880763" /translation="MRSLLLSSLALLPALALAQPDASSFPSCLAGLQKKAQAQGISAD SYERFTSGLQADLSVLDLLDAQPEFTTPLWDYLAGLVDEQRVSDGKAMLAQHDKLLDQ VAARYGVDKYTVVAVWGVESDYGRIFGKRPLLTSLSTLSCYGRRQSFFQGEFLATLKL LQAGDIRDAGITGSWAGAFGHTQFMPSTYARIAVDFDGDGRRDLVGSVPDALGSTANY LKKAGWRTGQPWGYEVKVPADFPASLAGRGKRQPLSAWVARGVRRVDGQPLPGGDEKA AILLPAGAQGPAFLVYRNYDAIYSYNAAESYALAIALLSDRLRGGSGLVASWPTDDPG ISRLERKQLQKALLARGYDIGEADGLIGTSTRKAIQAEQKRLGLTPADGRAGRKILEA LKGAQP" misc_feature 1271026..1271934 /locus_tag="PA1171" /note="Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis]; Region: MltB; COG2951" /db_xref="CDD:442193" misc_feature 1271947..1272150 /locus_tag="PA1171" /note="Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis]; Region: PGRP; COG3409" /db_xref="CDD:442635" protein_bind complement(1271942..1271954) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(1272200..1272796) /gene="napC" /locus_tag="PA1172" /db_xref="GeneID:880706" CDS complement(1272200..1272796) /gene="napC" /locus_tag="PA1172" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome C protein NapC" /protein_id="NP_249863.1" /db_xref="GeneID:880706" /translation="MKALIAWLAGYWRVLRRPSVHFSLGFLTLGGFIAGIVFWGGFNT ALEATNTETFCISCHEMRDNVFVELKDTIHYSNRSGVRATCPDCHVPHKWTDKIARKM QASKEVWGKIFGTINTREKFLDHRRELAEHEWARLKANDSLECRNCHNFEFMDFTRQS VRARQMHSTALASGEATCIDCHKGIAHHLPDMTGVKGW" misc_feature complement(1272218..1272778) /gene="napC" /locus_tag="PA1172" /note="periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; Region: napC_nirT; TIGR02161" /db_xref="CDD:131216" gene complement(1272807..1273298) /gene="napB" /locus_tag="PA1173" /db_xref="GeneID:878319" CDS complement(1272807..1273298) /gene="napB" /locus_tag="PA1173" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome C protein NapB" /protein_id="NP_249864.1" /db_xref="GeneID:878319" /translation="MKPLLTALLLVLLGAPAAFAADLGYPLDAPAPDGRRPGGTLAES RPAPPLAAEENKDLKRERNYPEQPPTIPHSIVGYRIDKDSNKCLSCHSRANSARTQAV MISITHYMDRDGQPLAAVSPRRYFCVQCHVPQQDVKPLVDNRFENIDQILEKEAANAA RKP" misc_feature complement(1272834..1273214) /gene="napB" /locus_tag="PA1173" /note="Nitrate reductase cytochrome c-type subunit NapB [Energy production and conversion, Inorganic ion transport and metabolism]; Region: NapB; COG3043" /db_xref="CDD:442277" gene complement(1273309..1275798) /gene="napA" /locus_tag="PA1174" /db_xref="GeneID:878409" CDS complement(1273309..1275798) /gene="napA" /locus_tag="PA1174" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nitrate reductase catalytic subunit" /protein_id="NP_249865.1" /db_xref="GeneID:878409" /translation="MNSPRPTPPPFAAAAAGLPILVRASNLVTEADVTSLVWNKAPCR FCGTGCSVMVATRDGQVVATHGDIKAEVNRGINCVKGYFLSKIMYGSDRLTRPLLRMK DGKFDKQGEFQPISWEQAFDIMAEKFKAALKAKGPESVGMFGSGQWTVWEGYAANKLF KAGLRSNNIDPNARHCMASAVMGFMRSFGMDEPMGCYDDIEATDSFVLWGSNMAEMHP VLWSRVTDRRLSAPQVKVAVLSTFEHRSFELADLPMVFKPQTDLIILNYIANHIIESG AVNRDFVERHVRFAHGAEDIGYGLRPDDPLEKKAKNADKANTWSDIDFKAFAEFVKPY TLERTARESGVPAERLKALAELYADPKRKVVSFWTMGFNQHTRGVWANNLIYNIHLLT GKISEPGNSPFSLTGQPSACGTAREVGTFSHRLPADLVVTNPKHRETAEKIWKVPAGT IQEKVGFHAVQQSRMLKDGVLNVYWTQVSNNMQAGPNVMQEVLPGWRNPDNFVIVSDV YPTVSAQAADLILPSAMWVEKEGAFGNAERRTQFWHQLVKAPGEAKSDLWQLVEFSKR FTTDEVWPAELLAKAPELKGKTLYDVLFRNGQVDRFPASDLAKGYANDEVDAFGFYIQ KGLFEEYAAFGRGHGHDLAPFDAYHEARGLRWPVVDGKETRWRYREGYDPYVSKGSGV QFYGYPDKKAIVFALPYEPPAEAPDQDYPFWLATGRVLEHWHTGSMTARVPELYKAVP DALVYMHPEDARQLKLRRGSEVKVVSRRGEIRARVETRGRNKPPQGLVFVPFFDANKL INKVTLDATDPISKQTDYKKCAVRIELLNLA" misc_feature complement(1273327..1275750) /gene="napA" /locus_tag="PA1174" /note="nitrate reductase catalytic subunit NapA; Region: PRK13532" /db_xref="CDD:237416" misc_feature complement(order(1275142..1275144,1275565..1275567, 1275649..1275651,1275661..1275666,1275670..1275672)) /gene="napA" /locus_tag="PA1174" /note="[4Fe-4S] binding site [ion binding]; other site" /db_xref="CDD:239155" misc_feature complement(order(1274131..1274133,1274212..1274214, 1274224..1274232,1274272..1274283,1274347..1274349, 1274359..1274364,1274575..1274580,1274677..1274679, 1274686..1274694,1275016..1275018,1275022..1275024, 1275073..1275081,1275151..1275156,1275163..1275174, 1275271..1275273,1275283..1275285,1275358..1275360, 1275559..1275561)) /gene="napA" /locus_tag="PA1174" /note="molybdopterin cofactor binding site; other site" /db_xref="CDD:239155" gene complement(1275795..1276124) /gene="napD" /locus_tag="PA1175" /db_xref="GeneID:879211" CDS complement(1275795..1276124) /gene="napD" /locus_tag="PA1175" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nitrate reductase biosynthesis protein NapD" /protein_id="NP_249866.1" /db_xref="GeneID:879211" /translation="MPEALQIASLILHCRPERLPAVKANLALLDGLEIYQESPQGKLI LVLEAEREEQILDTLGQLQNLPGVLNAVLVYHEILHDDDSNDAAAMTDRAIPCSPEET IDEPHPS" misc_feature complement(1275867..1276124) /gene="napD" /locus_tag="PA1175" /note="Cytoplasmic chaperone NapD for the signal peptide of periplasmic nitrate reductase NapAB [Posttranslational modification, protein turnover, chaperones]; Region: NapD; COG3062" /db_xref="CDD:442296" gene complement(1276117..1276608) /gene="napF" /locus_tag="PA1176" /db_xref="GeneID:878505" CDS complement(1276117..1276608) /gene="napF" /locus_tag="PA1176" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ferredoxin protein NapF" /protein_id="NP_249867.1" /db_xref="GeneID:878505" /translation="MSSRRELFRRLGGHPPTRRPPWTAADFAAGCTGCAACVGACPEG VLKLGAGRLVELDLSSAGCTLCGECASRCEAGLFDGARPAFPWIATIGEACLALAGIH CRSCQDACEPAAIRFRPAPGGVALAELDSQRCNGCGACLAPCPSQAIQLRALSTKESP RHA" misc_feature complement(1276147..1276557) /gene="napF" /locus_tag="PA1176" /note="NapF, iron-sulfur subunit of periplasmic nitrate reductase; Region: NapF_like; cd10564" /db_xref="CDD:319886" misc_feature complement(order(1276162..1276164,1276177..1276179, 1276189..1276191,1276198..1276212,1276216..1276218, 1276264..1276269,1276273..1276281,1276291..1276302, 1276342..1276344,1276375..1276380,1276387..1276392, 1276402..1276404,1276411..1276422,1276429..1276431, 1276450..1276452,1276456..1276458,1276474..1276476, 1276486..1276488,1276498..1276503,1276507..1276518, 1276537..1276539)) /gene="napF" /locus_tag="PA1176" /note="Fe-S cluster binding site [ion binding]; other site" /db_xref="CDD:319886" gene complement(1276617..1276784) /gene="napE" /locus_tag="PA1177" /db_xref="GeneID:878584" CDS complement(1276617..1276784) /gene="napE" /locus_tag="PA1177" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nitrate reductase protein NapE" /protein_id="NP_249868.1" /db_xref="GeneID:878584" /translation="MNEQPDQGRVKGMEARLFLFLVICLFPLLSVALVGGFGFCVWMY QLLAGPPGPPA" misc_feature complement(1276629..1276784) /gene="napE" /locus_tag="PA1177" /note="Periplasmic nitrate reductase protein NapE; Region: NapE; pfam06796" /db_xref="CDD:429124" gene 1277006..1277608 /gene="oprH" /locus_tag="PA1178" /db_xref="GeneID:878005" CDS 1277006..1277608 /gene="oprH" /locus_tag="PA1178" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="PhoP/Q and low Mg2+ inducible outer membrane protein H1" /protein_id="NP_249869.1" /db_xref="GeneID:878005" /translation="MKALKTLFIATALLGSAAGVQAADNFVGLTWGETSNNIQKSKSL NRNLNSPNLDKVIDNTGTWGIRAGQQFEQGRYYATYENISDTSSGNKLRQQNLLGSYD AFLPIGDNNTKLFGGATLGLVKLEQDGKGFKRDSDVGYAAGLQAGILQELSKNASIEG GYRYLRTNASTEMTPHGGNKLGSLDLHSSSQFYLGANYKF" misc_feature 1277195..1277605 /gene="oprH" /locus_tag="PA1178" /note="Opacity protein LomR and related surface antigens [Cell wall/membrane/envelope biogenesis]; Region: LomR; COG3637" /db_xref="CDD:442854" gene 1277688..1278365 /gene="phoP" /locus_tag="PA1179" /db_xref="GeneID:879194" CDS 1277688..1278365 /gene="phoP" /locus_tag="PA1179" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component response regulator PhoP" /protein_id="NP_249870.1" /db_xref="GeneID:879194" /translation="MKLLVVEDEALLRHHLYTRLGEQGHVVDAVPDAEEALYRVSEYH HDLAVIDLGLPGMSGLDLIRELRSQGKSFPILILTARGNWQDKVEGLAAGADDYVVKP FQFEELEARLNALLRRSSGFVQSTIEAGPLVLDLNRKQALVEEQPVALTAYEYRILEY LMRHHQQVVAKERLMEQLYPDDEERDANVIEVLVGRLRRKLEACGGFKPIDTVRGQGY LFTERCR" misc_feature 1277688..1278347 /gene="phoP" /locus_tag="PA1179" /note="two-component system response regulator PhoP; Region: PRK10816" /db_xref="CDD:182755" gene 1278362..1279708 /gene="phoQ" /locus_tag="PA1180" /db_xref="GeneID:879187" CDS 1278362..1279708 /gene="phoQ" /locus_tag="PA1180" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component sensor PhoQ" /protein_id="NP_249871.1" /db_xref="GeneID:879187" /translation="MIRSLRIRLMLGAAALAVLFMLALLPALQRAFGIALENTIEQRL AADVATLVSAARVEKGRLVMPEHLPVEEFNLPEAKVLGYIYDQNGDLLWRSTSAADES INYTPRYDGRGNEFHTTRDAKGEEFFVFDVEIDLLRGKQAAYSIVTMQSVSEFESLLK GFREQLYLWLGGALLVLLGLLWLGLTWGFRAMRGLSSELDQIESGERESLSEEHPREL LRLTHSLNRLLRSEHKQRERYRHSLGDLAHSLKTPLAVLQGVGDQLAEEPGNREQVRV LQGQIERMSQQIGYQLQRASLRKSGLVRHREQLAPLVETLCDALDKVYRDKRVSLQRD FSPSFSVPVERGALLELLGNLLENAYRLCLGRVRVGARLGPGYSELWVEDDGPGVPAE QRARIIRRGERADTQHPGQGIGLAVALDIIESYDGELSLDDSELGGACFRIRFATV" misc_feature <1278929..1279699 /gene="phoQ" /locus_tag="PA1180" /note="two-component system sensor histidine kinase PhoQ; Region: PRK10815" /db_xref="CDD:182754" gene 1279810..1283172 /locus_tag="PA1181" /db_xref="GeneID:878391" CDS 1279810..1283172 /locus_tag="PA1181" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="sensor protein" /protein_id="NP_249872.1" /db_xref="GeneID:878391" /translation="MFSGKTDDRGLWAGIQAGVLFFLAALACIYLSRQPATIAAIWLP NAILTAALLRAPLRQWPAILLCSAVANLAANRLYGDSLWMSAAFLPANLSEAIFAAML LRINRVREDFEFNLHSAVRVLWAGALIPPLLGASVGAVLVSVFGMGRFPEMWARWYVG DAMGMLALLPLCMASNLAAWRHALSGRAGVDNAMLLLVTLVISFVALTRLPYAFIYVL LPLLVAAASTSVFGTALIGCLNTCFIAVLIALGVFLPESSQQRFGEPLLYLPMALTLI PAFLVSVIMERSRREQHQVAIGEAQFRGAMEFSAIGMALVSLEGRLFKVNEALCRMLG YSAERLGELSFQEITYVDDLELDLDLVRDLLAGRINSYQMEKRYLRQDGETFWARISV SLVRDEEGVAQYFVTQVEDIDSRKRAELERERLAERIKLATDAGQIGIWEWDLARNRL HWDFRMFDLYGIRSGPGETTVEQWKASLHAEDHDRVLRELERAVSGLQKFDCEFRIVR PNREVRHLRAIATLTRDADNRPVRMIGINSDITEIRTLAETLHEEKERLQVTLYSIGD AVLTTDAGGRVTFMNPVAEAMTGWTLQDAIGAPHELVFNVLDSDTGEALESPVRRCLQ NTRVFYLEDGATLISRKGEQHDIQNCAAPVRTRDGEIIGTVLVFQNVTKARAMQRELS YHASHDALTGLFNRTKFEEELQRALANAQERATQHALCFIDLDRFKVVNDSAGHAAGD MLLRELSRILADRTRASDTLARLGGDEFGLLLFDCDLAEAEQVASKLIEQICSVRFPW EGRLYDVGASIGITALTATSRSTSELMSQADVACYAAKHAGRNRVSVYQFGHEEVERQ HRDILLASGLREALENDRFQLQAQEIVPVGPRRDGDRHYELLLRLYDPDGQMTPPGAF IPAAERFNLMASIDRWVINEALINFGARIAAVEGLSIGINLSGNSLNDPLFLPYLLDR IEHSPLRPERLYFELTETALMNQLSVASRIVAKLRDLGCKVALDDFGSGLSSFNYLKN FVVDVIKIDGSFVRNLDKSPVDQAIVDSINQIAHRLGAVTVAEFVESREILDHLARLG VDFAQGYAVGRPQPFATVLDQLRSGLRRQELG" misc_feature 1279852..1283154 /locus_tag="PA1181" /note="putative diguanylate cyclase; Provisional; Region: PRK09776" /db_xref="CDD:182070" gene complement(1283176..1284177) /locus_tag="PA1182" /db_xref="GeneID:878277" CDS complement(1283176..1284177) /locus_tag="PA1182" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249873.1" /db_xref="GeneID:878277" /translation="MRERTIASHFVRAALRGATRQGLDGPALLRRAGIQPALLDEPRA RIAPEQFTRLMQLLWEVLDDEYMGFGEVRSKRGTFAMMCHTLIHCRTLEKALQRGELF YGLFPQAPLIHLRRDGDLVRLSLEERHLSDPDHFLAESLLVIWHRLASWLIGQRIRLE EATFSYPAPDHQAEYDLLFPCPRRFSAGCTSLLFAARYLGMPLLQDERTLKQFLQHSP ADLLARPDGGDSLTSQIRRLLGRDCRRWPDLDQVARQLHMSSQTLRRHLREEGGSFQQ LKDHLRRDLAIYHLGRDELSIQDIAEQLGFSEPSAFHRAFKKWTGLTPGAYRHQAEA" misc_feature complement(1283569..1284114) /locus_tag="PA1182" /note="Arabinose-binding domain of AraC transcription regulator, N-term; Region: Arabinose_bd; pfam12625" /db_xref="CDD:432679" misc_feature complement(1283179..1283943) /locus_tag="PA1182" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" gene 1284513..1285823 /gene="dctA" /locus_tag="PA1183" /db_xref="GeneID:880848" CDS 1284513..1285823 /gene="dctA" /locus_tag="PA1183" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate transport protein" /protein_id="NP_249874.1" /db_xref="GeneID:880848" /translation="MTKQPFYKSLYVQVLVAIAIGIALGHWYPETAVAMKPFGDGFVK LIKMAIAPIIFCTVVTGIAGMQSMKSVGKTGGMALLYFEVVSTVALIIGLVVVNVVQP GAGMHVDPNTLDTSKIAAYAAAGEKQSTVDFLMNVIPGTVVGAFANGDILQVLFFSVL FGYALHRLGSYGKPVFEFIERVSHVMFNIINVIMKVAPIGAFGAMAFTIGAYGVGSLV QLGQLMLCFYITCILFVLIVLGGIARAHGFSILRFIRYIREELLIVLGTSSSESALPR MIDKMEKLGCNKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATDTPMDITHQITLL LVLLIASKGAAGVTGSGFIVLAATLSAVGHLPVAGLALILGIDRFMSEARALTNLVGN GVATVVVSKWCKQLDEGTLQRELAGEGNASSPASDIPVGGREAV" misc_feature 1284516..1285790 /gene="dctA" /locus_tag="PA1183" /note="C4-dicarboxylate transporter DctA; Reviewed; Region: PRK01663" /db_xref="CDD:234968" gene complement(1285898..1286788) /locus_tag="PA1184" /db_xref="GeneID:880700" CDS complement(1285898..1286788) /locus_tag="PA1184" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249875.1" /db_xref="GeneID:880700" /translation="MGAVLPLLALRAFVETARHGNLTRAAAAMGVTPGAVSQQLRALQ ARTGVVLFQRFSHGMRLTPEGEQVYPGLRQAFEQITASLAQLEAINARQTLTVSTEPS FAATWLVPRLGQFSASHPQVEVRVEATALLADLRRERIDVAIRHGLGDYPGLDVQALM APPLIPVASPRLLAEGPEIREAIDCLAYPLLQESERNDWRLWLRAMGVEDDPRSERGP AFADDLLLVRAAEAGQGIALVREIHARAEIASGRLAVALERPWPSRFAYYAVSLPGAA QRAPLSLFLAWLREQAAAEA" misc_feature complement(1285901..1286773) /locus_tag="PA1184" /note="DNA-binding transcriptional activator GcvA; Provisional; Region: PRK11139" /db_xref="CDD:182990" gene 1286990..1287619 /locus_tag="PA1185" /db_xref="GeneID:880645" CDS 1286990..1287619 /locus_tag="PA1185" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutathione S-transferase" /protein_id="NP_249876.1" /db_xref="GeneID:880645" /translation="MPSLQLYSDSSPNGFKITIALEELGLPYALHHVRIDHGEQRRPE FLRLNPHGRIPVLVDRAAGITLFESAAILQYLAETSGRLLPDAPRERWEALTWLTFHA SSMGPILGQRVHFEIFAEERYPPAIERYRRLSEEVFATLDQRLAGRPWLAGEQYSIAD IATFGWTHTARIVDFDFSHYRHLDDWHRRMALRPAVQRGILLPEPAVGP" misc_feature 1286999..1287610 /locus_tag="PA1185" /note="Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]; Region: GstA; COG0625" /db_xref="CDD:440390" gene 1287616..1288635 /locus_tag="PA1186" /db_xref="GeneID:877941" CDS 1287616..1288635 /locus_tag="PA1186" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249877.1" /db_xref="GeneID:877941" /translation="MSALLQGASAPAFVGHPGYRRMFAADALTLGLFLPLRFYQGDMR VLLGQARLVEEIDRLGFAAVWVRDVPLFDPRFGDAGQVFDPFTYLGYLAARTRRIALA TGSAVLALRQPVDLAKAAASVDRLSGGRLVLGLASGDRPVEFPAYGLEHAQRGERFAQ GLDYLRQLLHGCRHVASPLGTLDDAELLPRPPAGAIPLVVTGSARQPADWLARQADGW LTYPESTVDASGPRRLARKIRAWRMSIADGGFRPHMTNEWLDLVDDPAYPRTPLHGGY VLRTGRNGLIELLGEWRAAGVNHAALGIQFAARPAAEVIQELAEEVLPLFPSHPGVQP ASMDW" misc_feature 1287685..1288593 /locus_tag="PA1186" /note="luciferase-type oxidoreductase, BA3436 family; Region: lucif_BA3436; TIGR03571" /db_xref="CDD:274657" gene 1288737..1289876 /locus_tag="PA1187" /db_xref="GeneID:879934" CDS 1288737..1289876 /locus_tag="PA1187" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_249878.1" /db_xref="GeneID:879934" /translation="MQRQIFETEHNLFRDAFRAFLDKEVVPHQDAWEEAGVVDRAVWR KAGEMGFLLPWADEEYGGAGLKDFRYEQIMCEELARINEPGFMIPLHSALCGPYIAEY GSAEQKARLLPGIVRGETILAVAMTEPSAGSDLAGMRSTAVDKGDHWLLNGSKVFISN GLLADLVIVAAKTDPANKHAMGLFLVERGMQGFERGRNLKKLGMKSQDTAELFFNNVR VPKENLLGDAKGGFFYLMNMLAQERLTNACGAVAGAEAALQATIDYVKERQAFGRPVA HFQNTRFKLAEMRTQIDVAQVFTDRCVMDHNQKKLSPEVAAEAKLFTTELLGKVVDEG VQLHGGWGYMWEYPICRMYANARIQRIFAGTSEIMKEIISRGMKL" misc_feature 1288761..1289867 /locus_tag="PA1187" /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933" /db_xref="CDD:447864" misc_feature order(1289016..1289018,1289106..1289108,1289112..1289114, 1289205..1289207,1289211..1289213,1289814..1289822, 1289826..1289828,1289832..1289834) /locus_tag="PA1187" /note="active site" /db_xref="CDD:173838" gene 1289965..1291146 /locus_tag="PA1188" /db_xref="GeneID:880017" CDS 1289965..1291146 /locus_tag="PA1188" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249879.1" /db_xref="GeneID:880017" /translation="MKGPLSSLKVLDFSTLLPGPFASLLLADMGADVLRVESPGRMDL VRVLPPHVDGTSASHAYLNRNKRSIGLDLKRQGAREVVLELVREYDIVLEQFRPGVMD KLGVGYEALKAANPRLIYVAITGYGQTGPYRERAGHDINYLALAGVASYTGRRERGPL PLGVQLADLAGGSLHGVMGLLAAVIHRQQTGEGQFVDISMTDCAFSLNGMAGAGYLAA GVEPEMEALALNGGSFYDYYRTRDGRWFSVGSLEPQFMQQFCAAIGRPELAARGLSPK PEEQRALKREIEMEFEKRDFAEWQAVFAALDACVEPLLPLSEALEHPQLQARGLVARV PLADGGSQAQMACPIKFSAGLPAPRHIGAALGADTVAVLEGLGYSAERIAELKAAGAI A" misc_feature 1289965..1291143 /locus_tag="PA1188" /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]; Region: CaiB; COG1804" /db_xref="CDD:441409" gene complement(1291148..1291645) /locus_tag="PA1189" /db_xref="GeneID:880448" CDS complement(1291148..1291645) /locus_tag="PA1189" /codon_start=1 /transl_table=11 /product="Zn-dependent metalloprotease" /protein_id="NP_249880.1" /db_xref="GeneID:880448" /translation="MPEHLNARVEACYRQAEHFFQRSFPRPTVSFRLRGQKAGVAHLD ENLLRFNPQLYRENREHFLEQTVAHEVAHLIAHQLFGPRIRPHGEEWQLIMRGIYGLP PDRCHTYAVKRRATTRYLYRCHCPEHNDFPFSPQRHTLVAKGRRYYCRRCKATLVFTG EVLRE" misc_feature complement(1291163..1291645) /locus_tag="PA1189" /note="SprT family zinc-dependent metalloprotease; Region: PRK04860" /db_xref="CDD:179886" gene complement(1291813..1292412) /locus_tag="PA1190" /db_xref="GeneID:880589" CDS complement(1291813..1292412) /locus_tag="PA1190" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249881.1" /db_xref="GeneID:880589" /translation="MIHHVWGLFTHPDQEWQEIRGEEESISHMYLTHILILAAIPAIS AYIGTTQVGWVVGGGDPVKLTQASALQMTVLTYLAMLAGVAVMGAFIHWMARTYDANP SLTQCIVFAAYNATPLFIAGLAALYPHLWLGMIVGVAAISYTVYLLYVGIPTFMNIHK DEGFLFSSSVLAVGLVVLVAMIALSVILWGSGVGPEYTS" misc_feature complement(1291939..1292397) /locus_tag="PA1190" /note="Yip1 domain; Region: Yip1; pfam04893" /db_xref="CDD:461468" gene complement(1292571..1293164) /locus_tag="PA1191" /db_xref="GeneID:879923" CDS complement(1292571..1293164) /locus_tag="PA1191" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249882.1" /db_xref="GeneID:879923" /translation="MTPDLDHRLDLAGQILCLLREHPEGLSEYQLIQLLKARHSTHIP HRELADKLVLFRTHFLLFNALYHLRDHLWAEREAHLEISPLSLRLRPYVDGTQALEQG DPLRDYYLDLRHLGETSEADVERLLQSFWTRMQGSEEKAAALALFELEGAVDYPAIKL RYRQLVSQHHPDRGGSTARLQSINKAMEILQRYYSRP" misc_feature complement(1292769..1293122) /locus_tag="PA1191" /note="DNA-J related protein; Region: DNAJ_related; pfam12339" /db_xref="CDD:432489" misc_feature complement(1292589..1292738) /locus_tag="PA1191" /note="DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones]; Region: DjlA; COG1076" /db_xref="CDD:440694" gene 1293267..1294091 /locus_tag="PA1192" /db_xref="GeneID:883085" CDS 1293267..1294091 /locus_tag="PA1192" /codon_start=1 /transl_table=11 /product="tRNA 2-thiocytidine biosynthesis protein TtcA" /protein_id="NP_249883.1" /db_xref="GeneID:883085" /translation="MGTLSVNQNKLQKRLRRLAGEAITDFNMIEDGDKVMVCLSGGKD SYTMLDILLYLQKVAPIRFEIVAVNMDQKQPGFPEHVLPEYLKSIGVEYHIVEKDTYS VVKEKIPEGKTTCSLCSRLRRGTLYTFADEIGATKMALGHHRDDILETFFLNMFYGGT LKAMPPKLLADDGRNVVIRPLAYCSEKDIEAYSQLKEFPIIPCNLCGSQENLQRQVVK EMLLEWERKSPGRTEIMFRALQNVVPSQLADRNLFDFANLRIDENATPRFLDVMNL" misc_feature 1293279..1294049 /locus_tag="PA1192" /note="tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional; Region: PRK10696" /db_xref="CDD:236737" protein_bind complement(1293805..1293817) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1294138..1294809 /locus_tag="PA1193" /db_xref="GeneID:879469" CDS 1294138..1294809 /locus_tag="PA1193" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249884.1" /db_xref="GeneID:879469" /translation="MRDYAWMYEYCLNRFGSREALEARLPQPKSAAELRAVGDDRYLS LISLRIFRAGLKHSLVDAKWPAFEEVFFGFDPQKVVLMSAEHLERLMQDARLIRHLGK LKSVPRNAQMVLDLAREHGSFGNFLADWPETDIVGLWKLLSKRGNQLGGLSAPRFLRM AGKDTFIPSDDMVAALKAQEIIDKPPTSLKDLAAVQAAFNQWREESGRPLCQLSVMLA HTVNH" misc_feature 1294240..>1294566 /locus_tag="PA1193" /note="Methyladenine glycosylase; Region: Adenine_glyco; cl01059" /db_xref="CDD:470051" gene complement(1294811..1296229) /locus_tag="PA1194" /db_xref="GeneID:879327" CDS complement(1294811..1296229) /locus_tag="PA1194" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_249885.1" /db_xref="GeneID:879327" /translation="MADSDKGKLGLPALTALVVGGIIGSGIFSLPQNMAEGAGAGAIL IAWAITFVGMLTLTRIFQWLSTTRPELDDGVYGYAREGFGEYLGFNAAWGYWISAWVG NAGYLVVLFSALGSFGALAFFGDGTTWPALLGELTVLWLMHAFVLHGVHNAAITNAIV TLAKVVPIALFILCVALAFRIETFHLDFWGSPALGSVTRQVETTMLYTVWVFLGIESA TVYASHARHAADVSRATLLGFVVTLLLLVCVSVLSLGVVPQHELAQMKNPSMAQVMAA AVGPWGATLINVGLIVSVGGALLAWTMLAVEMLYLASRGPTHTAPALFGRTNAVETPA PALWLTSTLISALLLVAFLNASGYNALIQLATSMALIPYLLCAGFCLKLVARRPHSGA MLALALLGTLYGVWLIYAAGLKYLLLSMILYAPGLGFFLHARRQRGLPAFGNRAEGSV AALVLVLALAALWMIGSGRLTL" misc_feature complement(1294814..1296211) /locus_tag="PA1194" /note="arginine-ornithine antiporter; Region: arg_ornith_anti; TIGR03810" /db_xref="CDD:163522" gene complement(1296334..1297098) /locus_tag="PA1195" /db_xref="GeneID:883112" CDS complement(1296334..1297098) /locus_tag="PA1195" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249886.1" /db_xref="GeneID:883112" /translation="MFKHIIARTPARSLVDGLTSSHLGKPDYAKALEQHNAYIRALQT CDVDITLLPPDERFPDSVFVEDPVLCTSRCAIITRPGAESRRGETEIIEETVQRFYPG KVERIEAPGTVEAGDIMMVGDHFYIGESARTNAEGARQMIAILEKHGLSGSVVRLEKV LHLKTGLAYLEHNNLLAAGEFVSKPEFQDFNIIEIPEEESYAANCIWVNERVIMPAGY PRTREKIARLGYRVIEVDTSEYRKIDGGVSCMSLRF" misc_feature complement(1296340..1297053) /locus_tag="PA1195" /note="N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism]; Region: DdaH; COG1834" /db_xref="CDD:441439" gene 1297309..1298709 /locus_tag="PA1196" /db_xref="GeneID:878419" CDS 1297309..1298709 /locus_tag="PA1196" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249887.1" /db_xref="GeneID:878419" /translation="MALVEEPTISTRSGELAWLVDCLAPIFDGLRQPVTVVDPSGRFV YYNRASGLLDGLDPQRALGMHLLQSAPWLAAEQSTLLRCLAEGRPSIDTLQAYVGAGG ELLQYRHRAIPLRGRDGCLLGAMELGEVVAETEEAAGLADCPNILSVAPSLLRQLQRL DVFAATDLPLLIHGETGTGKELFARRAHALSPRRSGPMISLNCAAIPETLLESTLFGT TRGAFTGAENRKGMFALAQGGSLFLDEINSMPMAMQSKLLRVLQDGSYLPLGSLSPQR ADVRLIAASNQPPRQAIAEGRLREDLYYRLDVGSLCIPPLRERPGDVELLARAFVRRD ARSLNPRVTALGERALAQLLACDWPGNVRQLENVIRRSLLLHGEGGALLDEVAFADDG AEAVGGEAALSMNSAAVGGLREALAQQERNLIEDALRQARGNLSRAAARLRIPRTTLL GRMRRLGLPASLDPPA" misc_feature 1297351..1298682 /locus_tag="PA1196" /note="RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:443041" gene 1298722..1299492 /locus_tag="PA1197" /db_xref="GeneID:879533" CDS 1298722..1299492 /locus_tag="PA1197" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="NAD-dependent protein deacylase" /protein_id="NP_249888.1" /db_xref="GeneID:879533" /translation="MDSHSPIATVAQALRRAERILVITGAGLSADSGMPTYRGLGGLY NGRTEEGLPIEAALSGPMLRRDPALCWKYLAELGKACLAARPNAGHEAIAELQKHKPE CWVLTQNIDGFHRQAGSPAERLIEIHGELAPLYCQSCGAESGGLEEHLHGQLPPRCAA CGGVLRPPVVLFEEMLPEEAIDTLYRELRKGFDAVLVVGTTASFPYIVEPVLRTRQAG GFTAEVNPGVTDLSERVDVKMTGRALDIMPQVVSHIYR" misc_feature 1298737..1299483 /locus_tag="PA1197" /note="NAD-dependent deacetylase; Provisional; Region: PRK00481" /db_xref="CDD:234777" misc_feature order(1298800..1298802,1298806..1298811,1298830..1298835, 1298989..1298991,1299043..1299048,1299052..1299054, 1299103..1299105,1299316..1299318,1299331..1299333, 1299397..1299402) /locus_tag="PA1197" /note="NAD+ binding site [chemical binding]; other site" /db_xref="CDD:238698" misc_feature order(1299049..1299051,1299103..1299105,1299229..1299231, 1299235..1299249,1299328..1299336) /locus_tag="PA1197" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238698" misc_feature order(1299127..1299129,1299136..1299138,1299193..1299195, 1299202..1299204) /locus_tag="PA1197" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:238698" gene 1299558..1300175 /locus_tag="PA1198" /db_xref="GeneID:878425" CDS 1299558..1300175 /locus_tag="PA1198" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249889.1" /db_xref="GeneID:878425" /translation="MPMLKRLAPLVPMSFVLLLAACASHSPEPQVAKEPTAAKSSIDV ERDAIAWQDVEDEGADNSSAGTPALASSILERAFELIGTPYRFGGTTAKGFDCSGFVG YLFREEAGIKLPRSTRELIDMDVPLVSKDELQPGDLLFFNNRGRGRVSHAGIYIGDGQ FIHSASRRGGGVRVDSLDSSYWSLSYMEAKRVLEPGYKDALTSKR" misc_feature <1299624..1300133 /locus_tag="PA1198" /note="Cell wall-associated hydrolase, NlpC_P60 family [Cell wall/membrane/envelope biogenesis]; Region: NlpC; COG0791" /db_xref="CDD:440554" gene 1300258..1300791 /locus_tag="PA1199" /db_xref="GeneID:878316" CDS 1300258..1300791 /locus_tag="PA1199" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="NP_249890.1" /db_xref="GeneID:878316" /translation="MHALARFSILAFAALLTACASKAPPPAPAKQVVFRPATNFSPAA DDVLFRALGLVGTPYRWGGNTPDSGFDCSGLINFVYRDMTGIKLPRSTREMISMRAPS VPVQALQTGDLVFFATSGGRTVSHAGIYVGEGRFVHAPRTGGTVRLDSLQNSYWQRAY LDAKRVLVAPSPLARVP" misc_feature <1300378..1300755 /locus_tag="PA1199" /note="Cell wall-associated hydrolase, NlpC_P60 family [Cell wall/membrane/envelope biogenesis]; Region: NlpC; COG0791" /db_xref="CDD:440554" gene 1300811..1301473 /locus_tag="PA1200" /db_xref="GeneID:877932" CDS 1300811..1301473 /locus_tag="PA1200" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249891.1" /db_xref="GeneID:877932" /translation="MTTRTLNLDDNLYRYLLDVSLRETPLMTRLREETAKLPNARWQI APEQGQFIALLLTLIGARRALEVGTFTGYSALCMATALGEQGRLTCCDLPGDYHLTAR RYWREAAVEERIELRLGPALETLRALLDEGLAGQFDLAFIDADKANYPEYLEAALALV RQGGLVLFDNVLWSGRVLEAQPKSADTRGIQQLNLALKNDARVDYSLLPIGDGLSVCR KR" misc_feature 1300946..1301470 /locus_tag="PA1200" /note="tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; Region: TrmR; COG4122" /db_xref="CDD:443298" gene complement(1301481..1302395) /locus_tag="PA1201" /db_xref="GeneID:880881" CDS complement(1301481..1302395) /locus_tag="PA1201" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249892.1" /db_xref="GeneID:880881" /translation="MSLRLEDIQAFLNVVELGSISAAAERMSLSKSVISKRVSDLERH LGVRLLYRSTRNVEPTEAGGFFYKSAKASLQDLNNAAESVALRENDLCGELRVMAPMS FGTLWLGPLVMEFMARNPRLEVVLQLDDRIVDFEKEGYDLAIRITRLQDSSLIARQLG TSRRVVCCSPEYLERHGPLQRIEDILCHPCIGYSHNTPSQLWSFEPRVAGEPARMITP RGRFNTNNGQTMRDAAVRGLGLAMLPLFIAAEDLAAGRLVEALPQERPLDDLIYAMYS RAATLSPKVKLFVQFLQQALGSPPWGVR" misc_feature complement(1302207..1302383) /locus_tag="PA1201" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(1301520..1302119) /locus_tag="PA1201" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature complement(order(1301583..1301585,1301664..1301666, 1301715..1301717,1301910..1301912,1301916..1301918, 1301958..1301960,1302075..1302077,1302087..1302089)) /locus_tag="PA1201" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature complement(order(1301688..1301690,1301697..1301702, 1301721..1301735,1301829..1301831,1302012..1302032, 1302036..1302038,1302048..1302050,1302057..1302062, 1302066..1302071,1302081..1302086)) /locus_tag="PA1201" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 1302696..1303313 /locus_tag="PA1202" /db_xref="GeneID:882011" CDS 1302696..1303313 /locus_tag="PA1202" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_249893.1" /db_xref="GeneID:882011" /translation="MSFTYKRLDKNDAAVLFVDHQAGLLSLVRDFSPDEFKNNVLALA DIARFFNLPTILTTSFEDGPNGPLVPELKEMFPQAPYIARPGNINAWDNEDFVKAVKA TGKKQLIIAGVVTDVCVAFPTLSALEEGFDVFVVTDASGTFNPVVRDAAWARMTAAGA QLMNWFSVGCELHRDWRNDIEGFGAILGGHLPAYANLIQSFGTKK" misc_feature 1302705..1303307 /locus_tag="PA1202" /note="isochorismate family cysteine hydrolase YcaC; Region: C_hydro_YcaC; NF041461" /db_xref="CDD:469349" gene 1303457..1303864 /locus_tag="PA1203" /db_xref="GeneID:880886" CDS 1303457..1303864 /locus_tag="PA1203" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249894.1" /db_xref="GeneID:880886" /translation="MATQVVNASLGTTPYRVTLGDDSHQWLSDVPAALGGGDSGPSPH EILLSALGACTAITVAMYAQRKEWPLEGIDVQLNIVEERTKPEPFTHIRRDIRLAGDL DAEQRQRLLEIANACPIHRVLSGEVSVSSQLRD" misc_feature 1303487..1303858 /locus_tag="PA1203" /note="Uncharacterized OsmC-related protein [General function prediction only]; Region: YhfA; COG1765" /db_xref="CDD:441371" gene 1303892..1304449 /locus_tag="PA1204" /db_xref="GeneID:882133" CDS 1303892..1304449 /locus_tag="PA1204" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="NAD(P)H-dependent FMN reductase" /protein_id="NP_249895.1" /db_xref="GeneID:882133" /translation="MSDDIKVLGISGSLRSGSYNSAALQEAIGLVPPGMSIELADISG IPLYNEDVYALGFPPAVERFREQIRAADALLFATPEYNYSMAGVLKNAIDWASRPPEQ PFSGKPAAILGASAGRFGTARAQYHLRQTLVFLDVHPLNKPEVMISSAQNAFDAQGRL LDDKARELIQQQLQALQLWVRRLRG" misc_feature 1303904..1304392 /locus_tag="PA1204" /note="NAD(P)H-dependent FMN reductase [Energy production and conversion]; Region: SsuE; COG0431" /db_xref="CDD:440200" gene 1304476..1305423 /locus_tag="PA1205" /db_xref="GeneID:882088" CDS 1304476..1305423 /locus_tag="PA1205" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="quercetin 2,3-dioxygenase" /protein_id="NP_249896.1" /db_xref="GeneID:882088" /translation="MSNTEERCDLSSSRDCPERHEHLLQRVTARAAEIGGGITVSRLM PSRQRRMIGAWCFLDHAGPAEFEPGGGLAVGPHPHIGLQTFTWMIQGEALHRDSLGNV QVIRPGQVNLMTAGHGIAHTEESLPDERHAHAAQLWIALPYEQRDIAPAFDHHPDLPR WQEQGVTFTLLAGALAGRQAPCRLYSPLLGADLACHDASTLQLTLDPHFEYGLLPLEG GLEVGGEHFAVNELAYLGDGRDGLQLQLDPGARVLLLGGAPFGAEIFMWWNFVGHSKG EIARAQKAWEEGDARFGRLDALEGPRLSAPPIPWKIDAE" misc_feature 1304563..1305330 /locus_tag="PA1205" /note="Redox-sensitive bicupin YhaK, pirin superfamily [General function prediction only]; Region: YhaK; COG1741" /db_xref="CDD:441347" gene 1305583..1306056 /locus_tag="PA1206" /db_xref="GeneID:881985" CDS 1305583..1306056 /locus_tag="PA1206" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249897.1" /db_xref="GeneID:881985" /translation="MQFEHLVQVNDRTLVDLPVLDRLQLWEGLVCRAREPQYFVVGLE RFEILVDDGDRLHRRLYLPGLVVEDEVVLKAPDSAHYSIKPSAEVAGGSLDMTIEEPE PGSLFVRFAYCTRYLQPLGDELPYDAFVKQAYIAMDVETIATIRDRFGASAASGS" misc_feature 1305586..1306023 /locus_tag="PA1206" /note="DUF1857, an uncharacterized ligand-binding domain of the SRPBCC domain superfamily; Region: SRPBCC_DUF1857; cd08863" /db_xref="CDD:176872" misc_feature order(1305589..1305591,1305595..1305597,1305601..1305603, 1305655..1305663,1305667..1305672,1305718..1305720, 1305748..1305750,1305754..1305756,1305760..1305762, 1305766..1305768,1305787..1305789,1305793..1305795, 1305817..1305819,1305823..1305825,1305859..1305864, 1305868..1305870,1305874..1305876,1305904..1305906, 1305910..1305912,1305916..1305918,1305922..1305924, 1305958..1305972,1305976..1305984,1305988..1305996, 1306003..1306005) /locus_tag="PA1206" /note="putative hydrophobic ligand binding site [chemical binding]; other site" /db_xref="CDD:176872" gene 1306059..1307900 /gene="kefB" /locus_tag="PA1207" /db_xref="GeneID:881881" CDS 1306059..1307900 /gene="kefB" /locus_tag="PA1207" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutathione-regulated potassium-efflux system protein KefB" /protein_id="NP_249898.1" /db_xref="GeneID:881881" /translation="MEHGSSFLQSGVVFLIAAVFMVPLAKRLQLGAVLGYLLAGVLIG PSVLGLVDNPESVAQISEMGVVLLLFIIGLELSPRRLWVMRKSVFGVGLLQVLLTGLV IGTVALVGFDQPVNSAVVLGLGLALSSTAFGLQILAERKELTQPHGRLAFAILLFQDI AAIPLIAMIPLLSGAHSDAGGSELTQTLKVVGSIAAVVVGGRYLLRPVFRIVAQTKLQ DMSTATALLVVMGTALLMELAGVSMALGAFLAGLLLADSEYRHELEAQIEPFKGLLLG LFFISVGMSADISLLLKSPWMVLGLTVLLIALKAPVLYFVGRISGGLDKASALRLGVV LAAGGEFAFVVFKMARDQGLFQNDLHNLLVLSITLSMALTPLLVLGLARLLAKEPEAT KPPPEMERIDNDDTPRVVIAGVGRMGQIVARVLRAQRVPFIALDTSVETIELTRTLGA IPIFYGDPMRPEILRAAQVEKAEFFVIATDDPETNIETAKRVRKLYPHLKIIARARNR QHVHLLLDAGVEPVRETFFSSLEMSRMVLCGLGLSEEQADARIRRFRRHDEEVLASQH LFYNDRDALIKSAREARVELETLFQTDQLEDRGAVAAETPEKPSRAS" misc_feature 1306062..1307846 /gene="kefB" /locus_tag="PA1207" /note="glutathione-regulated potassium-efflux system protein KefC; Provisional; Region: PRK03562" /db_xref="CDD:235131" gene 1308067..1309566 /locus_tag="PA1208" /db_xref="GeneID:881683" CDS 1308067..1309566 /locus_tag="PA1208" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249899.1" /db_xref="GeneID:881683" /translation="MPVEHLDVLIVGAGLSGVGAAYHLMKHCPGKSFALLEGRAAMGG TWDLFRYPGIRSDSDMFTLGYNFKPWSDPKAIADGPSIRRYIEETARENGIDRKIRYR HRVLRADWDSANARWNLDVQRGDEPEPLRMTAQFLLMCTGYYRYEAGYTPEFVGREDF AGQVVHPQLWPEDLDYSGKKVVVIGSGATAVTLVPSLTDKAAHVTMLQRSPSYVITLP QKDAISNFLRRFLPETWIYRQARARNVAMQMVFFMLARTFPGLVRKALLKLASLQLGK RFDIRHFSPRYKPWDERVCAVPDGDLFKVLRKGKASVVTEHIDRFVERGIRLKTGEVL EADIIVTATGLDLVMFGGAELAVDGKPFLVNQSMGYRGIMLRDLPNLAAVVGYTNASW TLKADLSSEYFCRLINHMDATGMRQVTARDSTGDVREEPFLNLDSGYIQRAAERMPKQ GDRMPWKLYQNYVLDLALLRYGKVEDGYLVFSSPAPQRQAGGAAVQALG" misc_feature 1308067..1309398 /locus_tag="PA1208" /note="Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism]; Region: CzcO; COG2072" /db_xref="CDD:441675" gene complement(1309583..1310518) /locus_tag="PA1209" /db_xref="GeneID:880927" CDS complement(1309583..1310518) /locus_tag="PA1209" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249900.1" /db_xref="GeneID:880927" /translation="MRELQPLLENHGLLLLFLNVLCEQAGLPIPAYPALIVAGALAMQ GVGAPLGVVLLVVVLACLLADVAWYLAGRRYGGFLLRSICKVSLSQDSCIRQSQNMYL RVGPRALLMSKFLPGASALSTTLAGMTRTHLRRFLAYDAAGSALWAGSALLLGVIFSD AVDHLLALLSDYAAIGALLIAGAFAAFIAWKLWQRQRLLSRSRRIPRISVEELENLRE QGQLPVILDVRAHHEDEPSGIPGAIPVELNVSLKDLPGDLRDASIVIYCACPHELSAA MLAQRLNASGFTRTWALAGGLDAWRKAYGQVVANA" misc_feature complement(1309982..1310455) /locus_tag="PA1209" /note="Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family [Cell wall/membrane/envelope biogenesis]; Region: DedA; COG0586" /db_xref="CDD:440351" misc_feature complement(1309613..1309900) /locus_tag="PA1209" /note="GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a...; Region: GlpE_ST; cd01444" /db_xref="CDD:238721" misc_feature complement(1309718..1309720) /locus_tag="PA1209" /note="active site residue [active]" /db_xref="CDD:238721" gene complement(1310688..1311386) /locus_tag="PA1210" /db_xref="GeneID:881966" CDS complement(1310688..1311386) /locus_tag="PA1210" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="quercetin 2,3-dioxygenase" /protein_id="NP_249901.1" /db_xref="GeneID:881966" /translation="MIERRPFDRLGHANHGWLNARHHFSFADYYDPEREDWGRLRVWN DDEIAAGSGFPPHPHRDMEIITYVREGAITHQDSLGNKGRTEAGDVQVMSAGTGIVHS EYNLEAETTRIFQIWIIPDRRGDQPRWGSKPFPKAERDGRFVTLASGDEQDSEALHIR ADAEVAAVTLKAGQSAEYALENGRRAYLVPATGSIEVNGVRAEARDGLAVRDEPTLKV TALEDSEVLLVEVA" misc_feature complement(1310691..1311353) /locus_tag="PA1210" /note="Redox-sensitive bicupin YhaK, pirin superfamily [General function prediction only]; Region: YhaK; COG1741" /db_xref="CDD:441347" gene complement(1311504..1312139) /locus_tag="PA1211" /db_xref="GeneID:882007" CDS complement(1311504..1312139) /locus_tag="PA1211" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249902.1" /db_xref="GeneID:882007" /translation="MSGALLVSGFFLRRSAWSVEGAGWRSCDHLRDAPGCDLAHWLDQ AAATLAGEERVILCGHSFGGYLAQCLAARLGERAAHLYLFSALVSEGGGALESYQDSG QDNLLGLCRLDPLGGRVRLEDRAGFLELLGAEVPTSASEPAQLLIDPPRQVRPACPVT YVVAAADRLSPPPLQRTFAHRLDARVREYPGGHLAVLADPRFLRALIESNN" misc_feature complement(1311516..>1312049) /locus_tag="PA1211" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene complement(1312136..1313365) /locus_tag="PA1212" /db_xref="GeneID:882023" CDS complement(1312136..1313365) /locus_tag="PA1212" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_249903.1" /db_xref="GeneID:882023" /translation="MSDNTFSVQRFRALPTEIHVMLVGTLLTRGAYFMVWPFLALLLW REFRLSASAIGLLLALATVCGALSGIYTGWLSDRFGRKRLIFFGTSLSGLSFVLLGFS GQPLSYGLAISGVSIGCALLESSCKALIGDRVEDRRSRELALYCRYFLINLGAALGPL IGLTLGVAAQAGTFLVTALVYFCYGLLLWRLLHHLELKRRSLAPRSSTGFLEACLSMG RHRAFTLLLLCNMLAALIYATFDSTLVQYLTRSGLPDVVNSIALLVTINALTIVVAQF PLLRLLENTGTGGRLMLGMLLMLLAQLGFAWTPVTLFAGLALATVVLSLGELIVFPTF SVEVDQLTPDDLRGSYFGAANLYSLGTALAPLYGGIMLDHAGSQALYLGLAALCGVIM LLQVGAVGLRQAERAGG" misc_feature complement(1312169..1313314) /locus_tag="PA1212" /note="Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_MdtH_MDR_like; cd17329" /db_xref="CDD:340887" misc_feature complement(order(1312283..1312285,1312292..1312297, 1312301..1312306,1312313..1312315,1312361..1312363, 1312373..1312375,1312385..1312390,1312541..1312543, 1312553..1312555,1312640..1312642,1312649..1312657, 1312664..1312669,1312676..1312678,1312901..1312903, 1312910..1312915,1312922..1312924,1312985..1312987, 1312994..1313002,1313006..1313011,1313159..1313161, 1313258..1313260,1313267..1313272,1313279..1313284)) /locus_tag="PA1212" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340887" gene complement(1313362..1314321) /locus_tag="PA1213" /db_xref="GeneID:882124" CDS complement(1313362..1314321) /locus_tag="PA1213" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249904.1" /db_xref="GeneID:882124" /translation="MTTIHRRPAPWRGNAVFCASAAFAAGLETLFARLLERRPADSAE ALLRQRLHHELEHGSGVLLHDSALLRGLAEDEFQRVFRAFCQWLGRTVAINRNGEYLK EVRDLGLRDARDAPQRGHLTSQELAFHSDRADLTVLACWSPARRGGAFRIRSSADVLA TLEAANPAWLPLLGQPIPHDLRDEGDADYALVPLLTETPRTFVLRYIRKFNESVTRHG LSLAPQVRSMLDGLDEAIERADGYAELDFSKGMLVLVNNHTTLHARTEFSDDERQRRC LLRCWLSSEFTRELPESFLPLFHQVAAGSLRGGIRPLAQEPRP" misc_feature complement(1313467..1314240) /locus_tag="PA1213" /note="Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases...; Region: CAS_like; cd00250" /db_xref="CDD:238154" misc_feature complement(order(1313479..1313481,1313485..1313487, 1313776..1313778,1313923..1313925,1313938..1313940, 1313944..1313946,1314037..1314042)) /locus_tag="PA1213" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:238154" misc_feature complement(order(1313497..1313499,1313536..1313538, 1313872..1313874,1313947..1313949,1313953..1313955)) /locus_tag="PA1213" /note="active site" /db_xref="CDD:238154" misc_feature complement(order(1313536..1313538,1313947..1313949, 1313953..1313955)) /locus_tag="PA1213" /note="iron coordination sites [ion binding]; other site" /db_xref="CDD:238154" gene complement(1314318..1315916) /locus_tag="PA1214" /db_xref="GeneID:882040" CDS complement(1314318..1315916) /locus_tag="PA1214" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249905.1" /db_xref="GeneID:882040" /translation="MCGILGYVGTGFSVSRFAGALRLLAHRGPFGEGIAALPNGAIGM TRLPMSGAAAVPLPPQEGQRRVAYNGEVYQAGCEIHGEIRLLLDGLQRGVLPDGMYAL ASWDPQTRQLTLLRDEFGIKPLYYSYQPERGLLAFASEPRALLHLLGGARADAEAIAQ VVAAGVPLEGQTLFQQVRLLLPGEVLRFDLSQERPRLCQRQRLATAPASEVDSLDEQL GETLERCRQTFRPCALLVSGGVDSNLLGSYLDPQLQRFHLCLEGDEESLLPHPRLQRF ELRQEAFMPLLRRAVGNFGGATRMSSLLMYQRLADGIGEQGYHCVLLGEGADELFWGY PRHLELWRRRDTPEPRRFAAAWFGEYRRKAALLAEPAGRRVAERIEELAHEALGQGLE AAIGQFDLHYSLEPLLRRADHLLMSRTIEARTPYLHGALAQRAGRLQRIVGDTAKAPL VALLEQREKRWQAQPKRHFRLPFERWPQALGEMRRHLAERLPALHDLGLEGLDAPSVA ALPGDQLFTLTTLSLWQQEYGASL" misc_feature complement(1314333..1315916) /locus_tag="PA1214" /note="Asparagine synthetase B (glutamine-hydrolyzing) [Amino acid transport and metabolism]; Region: AsnB; COG0367" /db_xref="CDD:440136" protein_bind complement(1315553..1315565) /locus_tag="PA1214" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1214" /bound_moiety="AmrZ" gene complement(1315916..1317202) /locus_tag="PA1215" /db_xref="GeneID:882005" CDS complement(1315916..1317202) /locus_tag="PA1215" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249906.1" /db_xref="GeneID:882005" /translation="MLLDNSYRNLCLIYAVMRAGKHLVLIDPEWGEAAKQAIVDEMRL EALASEHPLEGALAGLRLALDFERSATRRLDRAAHSHMILFTSGTTGQPKGIELSQQA MLHAYRIGRDCLGIGEHTRSGCFYRISGLGILGINFLFPLLYGGSAVLLPLHCWADSE GFWECVERFGISFLYLVPPVVNHMVKEGSPPPRRLPLQRLLCVAGSARLDADLQAAFQ RDYAALANIYGLSECGFAFLFGKRRGDAFDNSVGPAVGLELKLTDPDGRPLEGSGERG RLWVRTPSLFSGYVNRPDLTAQVLEDGWLNTQDLAYFDEDRCVHVLGRCDGTINKGGN LFHLNECERALNGLDEVIDVCCLKVDCPLYGEDYVAVIHTAPQVEFAFLPWLQQQLGT LRAPQRVVLSHQALPLNGAGKHDRRALAALLQREAS" misc_feature complement(1315958..1316968) /locus_tag="PA1215" /note="Adenylate forming domain, Class I, also known as the ANL superfamily; Region: AFD_class_I; cd04433" /db_xref="CDD:341228" misc_feature complement(order(1316921..1316926,1316930..1316947, 1316954..1316956)) /locus_tag="PA1215" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341228" misc_feature complement(order(1315964..1315966,1316198..1316200, 1316231..1316233,1316240..1316242,1316276..1316278, 1316510..1316527,1316588..1316593,1316945..1316947)) /locus_tag="PA1215" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341228" misc_feature complement(order(1316024..1316026,1316198..1316209, 1316231..1316233,1316240..1316242,1316276..1316278, 1316510..1316527,1316588..1316593,1316654..1316656, 1316663..1316668,1316672..1316674,1316822..1316827, 1316945..1316947)) /locus_tag="PA1215" /note="active site" /db_xref="CDD:341228" misc_feature complement(order(1316024..1316026,1316042..1316044, 1316201..1316209,1316591..1316593,1316654..1316656, 1316663..1316668,1316825..1316827)) /locus_tag="PA1215" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:341228" gene complement(1317404..1318150) /locus_tag="PA1216" /db_xref="GeneID:878403" CDS complement(1317404..1318150) /locus_tag="PA1216" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249907.1" /db_xref="GeneID:878403" /translation="MKQFDKHADAYNVVRGKIAYPDSLYRNLAERAPAREAALDIGCG NGVSTVRLQPWFRYVEGSDLGEALIAKARENYPEIRFSVSPAETFAPQRRFDLVTSAT SFYWMDRKQVLTRMADWLTPGGLFCAYKYDFPIAYGPLRDFIEHELVNKWAKHRDPRL TRYDDTLEIMGSCPHLRDCRREVFANIIFLSPEEVALFFLSTSYVTRYIEQEGGEDYA DRFIAAVREIESAPQVAVNFDIHAFTALNR" misc_feature complement(1317773..1318036) /locus_tag="PA1216" /note="Trans-aconitate methyltransferase [Energy production and conversion]; Region: Tam; COG4106" /db_xref="CDD:443282" gene complement(1318147..1319514) /locus_tag="PA1217" /db_xref="GeneID:879659" CDS complement(1318147..1319514) /locus_tag="PA1217" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /protein_id="NP_249908.1" /db_xref="GeneID:879659" /translation="MIRVIDCTLREGCQARQCSFDSAQSVQLAREIAALGVDMIECGH PRISADERERVRAVVAAVSTPVLAHARARREDIDAVLETGAQWVGLFASINAISLETK FKGMNREEVLELFHDAIRYARERGLRVRATVEDAARTSVSDLVSMIATARDAGADRIC FADSVGILLPDETFDVLSLLRHEFPDVVFEYHVHNDRGLALGNTLAAIQAGVQWHSAS CNGIGERAGITDTFQLLTLLHTKFAADRFNLKNVLAVSELVEAHSRIKRSPMHPVVGE NAFVHVARLHQLAMQENQDAYSAFDPELINGRVSLQRYTPMHRQSLFLTPFEKSASEL KYHRHGPGKRFVMLDRRLLDGSPFYFIARQFHDVGDGGPGHVDSHVHNCDSVFLFLGS DEDYRGLEVEVLLGGQLRRLQSPASVFIPAGVEHSYRYLGGSGTYINFVHKGDYHESL LEITQ" misc_feature complement(<1318591..1319511) /locus_tag="PA1217" /note="Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism]; Region: LeuA; COG0119" /db_xref="CDD:439889" misc_feature complement(1318183..>1318317) /locus_tag="PA1217" /note="RmlC-like cupin superfamily; Region: cupin_RmlC-like; cl40423" /db_xref="CDD:477354" gene complement(1319511..1320389) /locus_tag="PA1218" /db_xref="GeneID:878233" CDS complement(1319511..1320389) /locus_tag="PA1218" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249909.1" /db_xref="GeneID:878233" /translation="MKHYRQVVSPQLRQQALDWILAAAQRPDPALEPEFDIADDERRE AKKVRNLHRHDPLFWDDWFARSGLDALVRDHLRKPRLLRHAAFIKRHADESYIPLHQD IALWEKRYESAQTFWVALTPSRNDNGGMFYYPDDRTIFPHEFDLAYPMFKCIDLQANG ISREQLVDAELDAGDVLVWPARTAHGSHNNRSGQLRIGMPIVFVEDDEFHQLNREDSM KTWIASNLKSVFPDEAITEDNLDHYLPQLCDYSLKMVTFLARFSRQFGHAPKIHDFIR EPRLATLSASDAGARR" misc_feature complement(1319796..1320371) /locus_tag="PA1218" /note="Phytanoyl-CoA dioxygenase (PhyH); Region: PhyH; pfam05721" /db_xref="CDD:399029" gene complement(1320386..1321000) /locus_tag="PA1219" /db_xref="GeneID:880899" CDS complement(1320386..1321000) /locus_tag="PA1219" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249910.1" /db_xref="GeneID:880899" /translation="MLILLPDFIGHPSCFRGLLARLGATDCRLVDYHRLDAYASIEAL ASQVLDGLAEEPDWLIGYSFGGLVGYEMARQLPASRLLMIDSHLPWPALRRMPPSEQY QRWLSAEMREWIALMSELGELREEVLLRNVELFGRWQPRHRLARASWVRCRDDAGRDP AAERWCDLIERLDTFPCERPHHLALQDPAVIDFIVHTVSKESVQ" misc_feature complement(1320419..1320997) /locus_tag="PA1219" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene complement(1320994..1322256) /locus_tag="PA1220" /db_xref="GeneID:879715" CDS complement(1320994..1322256) /locus_tag="PA1220" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249911.1" /db_xref="GeneID:879715" /translation="MNVGLSAEVRYHWFREHLVVVGDWHRLSPSERDRLRHQPMPDEA AQSLRVDLSPWSCGMVFSELLGADLTRFGLCYLAPAEVPASDLTRLGRRLREEFPLLD SQVDSGAEGFELVVHGQPEESPALEVGPFADENALIAALLQRPHSLFERGLLRLFHGR CGGRARWGVWLHHLVADADFASVLLARLAVLNADPTTEAAAPEFGFLQQQWRLERQLR ERRTRLEDYWSERGEAFRELASLPWAERASHCEDFRLAATPGGGEAALLTRLACALAL ALASQGATGKVLALTPVSLRSRRGTAVSGCWLNLVPLLLDAATAEDTFERHRLEAFEH SLLPAEAIAERAGLRYADAQVMINVIDQPFHSAGFIHRPTLKSRLPLTLTLVRRDDGG WDASLASRFGRERTLALAAAMAEALRPC" misc_feature complement(<1321084..1322181) /locus_tag="PA1220" /note="seryl-AMP synthase component of non-ribosomal peptide synthetase [Secondary metabolites biosynthesis, transport and catabolism]; Region: EntF; COG1020" /db_xref="CDD:440643" gene complement(1322253..1324109) /locus_tag="PA1221" /db_xref="GeneID:878373" CDS complement(1322253..1324109) /locus_tag="PA1221" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249912.1" /db_xref="GeneID:878373" /translation="MDSFFRKKAIVRMSQNSLLDLYAHPTVVARFSEMAALHPHREAI RDRFGSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLLAILLSGHHY LYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPANGLPCVPVRHLPAAPASVARPCFA ADQIAYINFSSGTTGRPKAIACTHAGITRLCLGQSFLAFAPQMRFLVNSPLSFDAATL EIWGALLNGGCCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLDPDCLGGL RQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTENTTFTCCHVVTDDDLEEDDIPIG KAIAGTAVLLLDEHGQEIAEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRL LRAYRTGDRARYDEQGRLRFIGRGDGQVKLNGYRLDLPALEQRFRRQPGILDCALLVR ERNGVKQLLCAWTGKADASPQALLRQLPTWQRPHACVRVEALPLTAHGKLDRAALLRR LEEPLERCASALDPDQRGCAQLWSELLGCEVGAADQDFFLCGGNSLLALQLVALCQSA GAGANLGLADLQANSRLDQFSRLLRSHGLAPERLLERAATPEQPLVLSRSAA" misc_feature complement(1322595..1324025) /locus_tag="PA1221" /note="The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C); Region: A_NRPS_Srf_like; cd12117" /db_xref="CDD:341282" misc_feature complement(order(1323576..1323581,1323585..1323602, 1323609..1323611)) /locus_tag="PA1221" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341282" misc_feature complement(order(1322865..1322867,1322874..1322876, 1322910..1322912,1323111..1323113,1323177..1323197, 1323255..1323263,1323471..1323473,1323576..1323578)) /locus_tag="PA1221" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341282" misc_feature complement(1322355..1322525) /locus_tag="PA1221" /note="Phosphopantetheine attachment site; Region: PP-binding; pfam00550" /db_xref="CDD:425746" gene complement(1324793..1325950) /locus_tag="PA1222" /db_xref="GeneID:878372" CDS complement(1324793..1325950) /locus_tag="PA1222" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="membrane-bound lytic murein transglycosylase A" /protein_id="NP_249913.1" /db_xref="GeneID:878372" /translation="MKFPFHPWRRLLLCALPFAALLTACDDGKKEPPPKPAEVTTYNS VPWDALPATSDADLLAGFNAWRSACARLAKDPVWGEPCASATTVAADPTAVRAFLQER MQVYSLRSSSNGDQGLITGYYEPVYHGSLSQGEKTPVPVYGVPDDLVVVALESVYPEL KGKRLRGRLEGRVLKPYDDAATIRDNGSSAPVLAWLGDPMDLQFLQIQGSGRIQLEDG RQLRIGYGDQNGHPYKPVGRWLVEQGLVPKEEISMKRIRDWAEANPQRVSELLASNPS FVFFSLRPDSDEGPRGSLNVPLTDGYSVAIDRKVIPLGSLMWLSTTRPDDGSAVVRPV AAQDTGGAIVGEVRADLFWGTGDAAGELAGHMKQPGRLWLLWPKGAPLPAS" misc_feature complement(1324799..1325926) /locus_tag="PA1222" /note="Membrane-bound lytic murein transglycosylase [Cell wall/membrane/envelope biogenesis]; Region: MltA; COG2821" /db_xref="CDD:442069" gene complement(1326046..1326939) /locus_tag="PA1223" /db_xref="GeneID:877659" CDS complement(1326046..1326939) /locus_tag="PA1223" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249914.1" /db_xref="GeneID:877659" /translation="MINLRRLDLNLLVTLDVLLTEHNVTRAAERLNFSQPSVSVHLAK LRAIFDDPLLLPGPRGMRPTARAEELREPLRLALEALEQAVAPAAPFDPTQSRHTWRV AATDYAESAILLPILASLRRQAPGSRLAVLELAPTRIVRQAERGEIDLAFHTLEEAPP GLRCRRLFSERYVLAGRAGHPGLRRRPTLKQFCRLEQAIVSPDGGGFLGPTDQALAEL GAERRVALSVPHFLFLRAVLESTDLVALLPSRLVRERDRLRVVEAPLEVSGYDLAMLW HERSHRDPAHRWLRELIAASV" misc_feature complement(1326736..1326879) /locus_tag="PA1223" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(1326052..1326645) /locus_tag="PA1223" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to DntR, which is involved in the catabolism of dinitrotoluene; contains the type 2 periplasmic binding fold; Region: PBP2_DntR_like_3; cd08461" /db_xref="CDD:176150" misc_feature complement(order(1326124..1326126,1326316..1326318, 1326430..1326432,1326604..1326606,1326616..1326621, 1326625..1326627)) /locus_tag="PA1223" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176150" misc_feature complement(order(1326178..1326180,1326220..1326222, 1326229..1326234,1326241..1326246,1326253..1326267, 1326352..1326354,1326541..1326543,1326547..1326561, 1326565..1326570,1326577..1326582,1326586..1326591, 1326598..1326603,1326610..1326615,1326622..1326624)) /locus_tag="PA1223" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176150" gene 1327024..1327803 /locus_tag="PA1224" /db_xref="GeneID:879344" CDS 1327024..1327803 /locus_tag="PA1224" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="NAD(P)H dehydrogenase" /protein_id="NP_249915.1" /db_xref="GeneID:879344" /translation="MNVLIVYAHPEPRSLNGALKDFAVARLEAAGHAVQVSDLYAMGW KAVLDAGDSLEREASERFDPSATSLRAFENGWQSVDIAGEQDKLRWADTLILQFPLWW FSMPAILKGWIDRVYACGFAYGVGEHSDSHWGDRYGEGRMQGKRAMLVVTAGGWESHY AARGINGPMDDLLFPIHHGILHYPGFEVLPPFVVYRSGRIDAERFAALSEQLGRRLDD LQRAAPIPFRRQNGGDYLIPALTLRDELAPQRAGFAMHLAE" misc_feature 1327027..1327683 /locus_tag="PA1224" /note="Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only]; Region: MdaB; COG2249" /db_xref="CDD:441850" gene complement(1327813..1328439) /locus_tag="PA1225" /db_xref="GeneID:879501" CDS complement(1327813..1328439) /locus_tag="PA1225" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="NAD(P)H dehydrogenase" /protein_id="NP_249916.1" /db_xref="GeneID:879501" /translation="MHALIVVAHHHPRSLTHALAARIAEGVVRAGHSAETADLAAEGF EPRFGLADHAVHRGQASPPADVLAEQARIDRADTLVLVYPIYWWSMPALLKGWIDRVF SNGWAFDYSIGGDLRKKLQRLRVVLVGVGGADAGTFERHGYAGAMRTQIDHGIFDYCG ARVVRSELLLESESADPIRHLDQALHIGSQLFAARGAQGAAQAQPLEA" misc_feature complement(1327864..1328436) /locus_tag="PA1225" /note="Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only]; Region: MdaB; COG2249" /db_xref="CDD:441850" gene 1328545..1329153 /locus_tag="PA1226" /db_xref="GeneID:882208" CDS 1328545..1329153 /locus_tag="PA1226" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249917.1" /db_xref="GeneID:882208" /translation="MSMHSPDDPSPRRRLSRDERQRQLLEVAWRLVREEGTEALTLGR LAEQAGVTKPVVYDHFGTRAGLLAALYQDYDLRQTALMEAALEASEATLEGRADVIAR AYVDCVMQQGREIPGVVAALASSPELERIKRDYEVLFMDKCRAVLEPFAGGGRLTVAA LRAMIGAAEALSHAAATEEIAPEEARRELYEAIVAMVARSRR" misc_feature 1328584..1329039 /locus_tag="PA1226" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene 1329192..1330040 /locus_tag="PA1227" /db_xref="GeneID:882189" CDS 1329192..1330040 /locus_tag="PA1227" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249918.1" /db_xref="GeneID:882189" /translation="MAACPELVDATFAILASGWHSTAVEVGGRWVFKFPRGAEAEAAL LREAAVLRLVRPAVSLPVPAPQVFAGPPLFSRHEKLPGGYLLGEDYRRLDEPARQAVG DALGRFYAELHRLPPARMRAVGALPVRPWESPAAMRRRALPLLPAAWRERAERLVREY AKLPADPLGSIFGFFDGHGWNMAFDSEAGRLNGVYDFADAGIGPLHQEFIYSAFIDAD LTERIVAAYERFSGRRLERRRIALLTAAHRLSELAELADEPRHLPDMLAGALDGLALA EAQGLA" misc_feature 1329222..1329917 /locus_tag="PA1227" /note="Phosphotransferase enzyme family; Region: APH; pfam01636" /db_xref="CDD:426359" gene complement(1330117..1330467) /locus_tag="PA1228" /db_xref="GeneID:882243" CDS complement(1330117..1330467) /locus_tag="PA1228" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249919.1" /db_xref="GeneID:882243" /translation="MVTHFLSESGQAACGRGDSNVNGSSDVGQVSCKTCRRTNAFAQA QENAAPASAPVTPTAAAPVIDKAAPRPKAEARLAAAQRQDRDAARKAWQARLNELSGK NRMPRSRRRAQAYL" misc_feature complement(<1330228..>1330332) /locus_tag="PA1228" /note="pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated; Region: aceF; PRK11854" /db_xref="CDD:236999" misc_feature complement(<1330126..>1330227) /locus_tag="PA1228" /note="Condensation domain of nonribosomal peptide synthetases (NRPSs); Region: C_NRPS-like; cl40425" /db_xref="CDD:394795" gene complement(1330577..1331383) /locus_tag="PA1229" /db_xref="GeneID:881400" CDS complement(1330577..1331383) /locus_tag="PA1229" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249920.1" /db_xref="GeneID:881400" /translation="MSREPQTYLAQRFDPDALGQPALALQLEARHNDTEVPVHRHRKG QLVVACRGGITCTVPDGLWMVPAGFGVWIPGGIAHSNRVTANGKVCFLFVEPGAARLP SDCCTLALSPLVLELILHLSAQPQDYPHDGPLARLAGVLLELLEQAPTEQLYLPLPDN RGLRRIADELTRAPGDRASMAEWARRVAMSERSLARMVRRETGMTFGQWRQQLQIIIA LQQLSAGVSVQRTAEILGYESVSSFIGMFRKALGSPPARYVRDSMRRPAD" misc_feature complement(1331036..1331320) /locus_tag="PA1229" /note="AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain; Region: cupin_NimR-like_N; cd06124" /db_xref="CDD:380379" misc_feature complement(1330604..1330837) /locus_tag="PA1229" /note="Helix-turn-helix domain; Region: HTH_18; pfam12833" /db_xref="CDD:432818" protein_bind 1331232..1331244 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1331517..1331714 /locus_tag="PA1230" /db_xref="GeneID:881244" CDS 1331517..1331714 /locus_tag="PA1230" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249921.1" /db_xref="GeneID:881244" /translation="MPCMLSEVSVSGLYVPPLFLYLCLAMPLYLLLERLAWRWLECAW HPGLLRFFLSFIVLSVLVLKF" misc_feature 1331535..1331696 /locus_tag="PA1230" /note="Protein of unknown function (DUF1656); Region: DUF1656; pfam07869" /db_xref="CDD:429704" gene 1331727..1332635 /locus_tag="PA1231" /db_xref="GeneID:881164" CDS 1331727..1332635 /locus_tag="PA1231" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249922.1" /db_xref="GeneID:881164" /translation="MSIVRLSKVAATFACGLLALCLALQLWQAYVLAPWTRDGRVSAQ VIRIAPEVSGSVEAVFVADNQRVARGDPLYRIDPRSYRLAVRQREAELEQARETLRQR DEQWRRRMQLAGAVSREEVANAGRALRIARARAEAAGAALDQARLDLRRSELRSPVDG YVTQLRVQPGDYAAAGRTNIFIVDRRSFWVTGYFEETKLRNVQVGAPATIKLMGFDPL LDGHVASIGRGVADLNESRADSGLPQVSPNFSWIRLAQRVPVRIELDRVPAGVVLAAG MTGSVEVLQAGTARHWRLTRWLQEYL" misc_feature 1331733..1332575 /locus_tag="PA1231" /note="p-hydroxybenzoic acid efflux pump subunit AaeA; Region: PRK10559" /db_xref="CDD:182548" gene 1332635..1334674 /locus_tag="PA1232" /db_xref="GeneID:881167" CDS 1332635..1334674 /locus_tag="PA1232" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249923.1" /db_xref="GeneID:881167" /translation="MAASASGGRDWYAALPLPWRTDSLGYVLRSIGAAALALGLGLYL QLDSPFSAASTVLLLINPVQGAVVGKGWWRAVGTLVGTLAAFVLTALFAQKMLLFVVA LGFWLGLCVGVMSLVRHFYATAAVVAGYTVCLALGPAMVEPEAAFEHIVTRASAVIVG VCCLSLVTVLFSRRTVSGRVRQRLVSLCAATLALVAARHAGAADGELERRRRTLAGEV YAVDDLLGVGRAESRVLSAALPAIRGGLAALFSTLMEFRFAGETHWARCLAERGLALP MADDLRLLGGQLERGELDFAGAARRLASLRGRLAAIRRGLPTDQADACREGLFMERLD EQLDDLQAALRGFARLDGRAPADVRPAAFHRHYREALRNGARAWLAMLVGGALWFLSG WDQGPTLLAVLGPYCTLLAASPFPAEGTRNFIRGTLYAIPAALLCKFLLLPLINGFPL LLLCLAFFWSFGIQATTVPRRALQGIAYLIAFNTLVATGNLARFDFGDFANQSCAWVL ALCISLLVYRLLPKDLERHSASLLDHLRRETLALLRRRAGFDAHAWQARQQHRIAQLG ALHGMEHPRSALALRLGFVSLQLGRESRRLWRALAGLDPAAAEARWIERALRAIAVRH RDPPLAARHARRAGARLAAAGEWRLAAILTDLAWLLRAYSQSVSSDGAQHGEKTS" misc_feature 1332761..1334503 /locus_tag="PA1232" /note="Fusaric acid resistance protein family; Region: FUSC; pfam04632" /db_xref="CDD:428044" gene 1334671..1334928 /locus_tag="PA1233" /db_xref="GeneID:881188" CDS 1334671..1334928 /locus_tag="PA1233" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249924.1" /db_xref="GeneID:881188" /translation="MKTSFLLALLLSCWSQVQAADDDGKELPPIERYDYGMPLDIERV LSVTPVPATCGVVPLVMLYRDSAGRLHRLQYRGLGAGCSRH" misc_feature 1334698..1334919 /locus_tag="PA1233" /note="Protein of unknown function (DUF2790); Region: DUF2790; pfam10976" /db_xref="CDD:431571" gene complement(1334950..1335453) /locus_tag="PA1234" /db_xref="GeneID:881198" CDS complement(1334950..1335453) /locus_tag="PA1234" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249925.1" /db_xref="GeneID:881198" /translation="MASYAELFDIGEDFAAFVGHGLATEQGAVARFRQKLESNGLPSA LTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELAIISKGRAEDDLRQ RLALERIAIPLVLVLDEEFNLLGRFVERPQAVLDGGPQALAAYKAGDYLEHAIGDVLA IIEGAAR" misc_feature complement(1335031..1335423) /locus_tag="PA1234" /note="Region: Thioredoxin_9; pfam14595" /db_xref="CDD:434059" gene 1335645..1336427 /locus_tag="PA1235" /db_xref="GeneID:881170" CDS 1335645..1336427 /locus_tag="PA1235" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249926.1" /db_xref="GeneID:881170" /translation="MLIDLPSTRPVFAYAQDYLHGERVELHRHSRAQLIHALSGVVTV GTAEGTWVVPPGRGVWLPAGIEHALRFAGQVRMRTLFIAPQARHDLPRDCRVVDVPPL LRQLIVAAMRIAPDYPPGGRDERVMELILDELRVLPILALHVPQPVDPRLAALCRSLR AEPAADWSLGDAARRLGVSPRTLTRAFQRETGLSFVQWLRRMRLLASLDALAAGHSIL EVALDLGYDSQSAFSAMFRRTLGVSPSLYFGRGAAYGVAEGD" misc_feature 1335675..1335959 /locus_tag="PA1235" /note="AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain; Region: cupin_NimR-like_N; cd06124" /db_xref="CDD:380379" misc_feature 1336140..1336385 /locus_tag="PA1235" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene complement(1336430..1337941) /locus_tag="PA1236" /db_xref="GeneID:881177" CDS complement(1336430..1337941) /locus_tag="PA1236" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_249927.1" /db_xref="GeneID:881177" /translation="MSADDKVSLRAWVAVTGGLFGCFMAGMNVHVTSAALPEIEGALG ATFEEGSWISTAYLVAEISMIPLTAWLVEVFSLRRVMLLGSLVFLLSSLSCALAPNLS TLILIRVIQGASGAVLIPLSMQLILTELPSSRIPLGMALFSLSNSVAQAAGPSIGGWL ADAYSWRWIFLLQLLPGIALLAAVAWSIRPRDGDRERLRQADWLGIGAMVAGLGALQI VLEEGGRRDWFESGFIRTFAVLAVLALLLFVQRQLWGARPFINLRLLGSYNFGVSSLA MAVFGAATFGLVFLVPNYLSQLQGFNARQIGDSLILYGLVQLLLAPLLPRLMRWLNPK LLVAGGFAIMALGCWMGAHLNADAGRNVIIPSIVVRGIGQPLIMVALSVLAVKGLDKA QAGSASALISMLRNLGGAIGTALLTQLVSLRERFHSERIGETLTIFDGALQQRLGGGQ VRIQLPEQQQALALLDHGVRQQAYLMAYSDAFYLSCVALLACALASLMLRQKD" misc_feature complement(1336481..1337887) /locus_tag="PA1236" /note="Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_LmrB_MDR_like; cd17503" /db_xref="CDD:341046" misc_feature complement(order(1336715..1336717,1336724..1336729, 1336736..1336741,1336748..1336750,1336796..1336798, 1336808..1336810,1336820..1336825,1336979..1336981, 1336991..1336993,1337075..1337077,1337084..1337092, 1337099..1337104,1337111..1337113,1337492..1337494, 1337501..1337506,1337513..1337515,1337573..1337575, 1337582..1337590,1337594..1337599,1337747..1337749, 1337843..1337845,1337852..1337857,1337864..1337869)) /locus_tag="PA1236" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341046" gene complement(1337931..1339082) /locus_tag="PA1237" /db_xref="GeneID:881184" CDS complement(1337931..1339082) /locus_tag="PA1237" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="multidrug resistance efflux pump" /protein_id="NP_249928.1" /db_xref="GeneID:881184" /translation="MNQAIREPIEHTTGETMPAATRRRRTWLLGGLAGAIALAALLAW WWSSGRFLEGTDDAYVRADWVAVSAQVSGYVAEVLVADDADVQAGDLLLRLDPRDFRQ RLRAAEAREAAAQAALEAQRAKLETLDRQLLEQAQTISRARADGEAARAEWRRAETDW RRYRQLADEHATSRQRLENADAAHQRARAAARRASAEEGRQRAAKDVLKSRRREAEAA LAQRQAELQEAAAARELARHALDDTEIRAPFAGRVGQRKVRLRQYVTPGLPLLAVVPL EQAYVVANYKETQLERIRPGQPVELEVDTFGRRWRGRVDSVAPASGAVFALLPPDNAT GNFTKIVQRFPVRIRLDADAAERGRLLPGMSVIATVDTREPDGASADER" misc_feature complement(1337973..1338926) /locus_tag="PA1237" /note="Cation efflux system protein CusB domain 1; Region: CusB_dom_1; cl46872" /db_xref="CDD:481212" gene complement(1339079..1340527) /locus_tag="PA1238" /db_xref="GeneID:881203" CDS complement(1339079..1340527) /locus_tag="PA1238" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="multidrug efflux pump outer membrane protein" /protein_id="NP_249929.1" /db_xref="GeneID:881203" /translation="MPLASHLRCVALALGISTALGCANRNQPAPRAESLDPGLSRVAG TRGDALPAQWWTLYQDPGLNHLVAAALRHNRDLAAADAHARALLGHLRGAQGERWPRT EVGYGYQYGRDGDDQTLAEATDEDLHSQWKHTVRLDLSYQLDLWGEVRARIAAAKADA EAAQAARDLLRVSVASQTTLAYVRACALARRAEVQRRSVGLLDASLALSERQLAAGLS SELQRRRLLALRERTRAALPMLEARRRAALYELALLSGRSPRQLDAPAATCAGIPQLR RALPTGDGWSLLARRPDVRAAERRLAAADARRALAEAELYPRISFAVGAETSAATLAG LGGSGALAYAAGPLLSWRFPNRESARGRLDSAAAERDAALARFDGAVLGALREVERAL ALYAGERQRRADLQRALDEQRHAYRLARSNYRAGALDALELLDSQRSLVADRARLVDA EMRVAERQVELFRALGGGWQAASSPSHQENGQ" misc_feature complement(1339124..1340395) /locus_tag="PA1238" /note="efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; Region: outer_NodT; TIGR01845" /db_xref="CDD:273830" gene complement(1340910..1341794) /locus_tag="PA1239" /db_xref="GeneID:881217" CDS complement(1340910..1341794) /locus_tag="PA1239" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249930.1" /db_xref="GeneID:881217" /translation="MTSLTQHSAAPVRMERLALPATDGYPLSAYRYHAPGHAHGNLLV AGATGVAQRFYRRFAEHAARQGFDVLTLDYRGIGESAPASLKGFAMSYLDWAYRDLAA AVELLGREERPLYWIGHSFGGHAIGLLPDHGRLAACYSFGSGAGWSGWMSRREALKVR LLWTLVLPPLVAWKGYMAWSLLGMGDDLPLGVYRDWKRWCRHPRYYFDDPAMRHLHQR YAAVRTPCLFATALDDPWAPPRSRDAFVEAYRNAPLETLDLRPDGGPLGHMGYFRAGA EALWDDALRWLRRHPENA" misc_feature complement(1340922..1341767) /locus_tag="PA1239" /note="Predicted alpha/beta hydrolase [General function prediction only]; Region: COG4757" /db_xref="CDD:443790" gene complement(1341851..1342648) /locus_tag="PA1240" /db_xref="GeneID:881179" CDS complement(1341851..1342648) /locus_tag="PA1240" /EC_number="4.2.1.17" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="NP_249931.1" /db_xref="GeneID:881179" /translation="MSEANSGPGRVTREQRGHLFLIGLDRAGKRNAFDSAMLADLALA MGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASGFRYPDGGVDPWGVVQPRRS KPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGW TDAMRYILTGDEFDADEALRMRLLTEVVEPGEELARALEYAERIARAAPLAVRAALQS AFQGRDEGDDAALSRVNESLAALIGSEDVREGVLAMVQKRAPAFKGR" misc_feature complement(1341854..1342618) /locus_tag="PA1240" /note="crotonase/enoyl-CoA hydratase family protein; Region: PRK06563" /db_xref="CDD:180625" misc_feature complement(order(1342223..1342225,1342232..1342237, 1342301..1342309,1342313..1342315,1342433..1342447, 1342457..1342459,1342553..1342555,1342559..1342561)) /locus_tag="PA1240" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(1342301..1342303,1342439..1342441)) /locus_tag="PA1240" /note="oxyanion hole (OAH) forming residues [active]" /db_xref="CDD:119339" misc_feature complement(order(1342037..1342042,1342049..1342051, 1342094..1342096,1342103..1342105,1342136..1342138, 1342145..1342150,1342154..1342159,1342163..1342168, 1342181..1342186,1342190..1342198,1342202..1342204, 1342220..1342231,1342265..1342276,1342337..1342339, 1342364..1342366)) /locus_tag="PA1240" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene 1342813..1343373 /locus_tag="PA1241" /db_xref="GeneID:881636" CDS 1342813..1343373 /locus_tag="PA1241" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249932.1" /db_xref="GeneID:881636" /translation="MRPLKISRDELLQRCAGTFRRYGYHGTTMEMLSSACGLTKASFY HHYPNKEALLRDVLEWTHQRLAETLFSIAYDPLLTPRERLEKLGRKAARLFQDDSIGC LMGVVAVDASYGRSELMAPIRSFLDDWAQAFAQLYRPAFDEAQALERGRQLVADFEGA ILLARIYGEPGYIDGVTRRALEQLAG" misc_feature 1342813..1343289 /locus_tag="PA1241" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene 1343453..1345225 /locus_tag="PA1242" /db_xref="GeneID:881237" CDS 1343453..1345225 /locus_tag="PA1242" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249933.1" /db_xref="GeneID:881237" /translation="MPLRRAVFAILFASLGSPLVAAETPLRLERLERCGDLLASERQE WCLRVRGLGAGLPRLLLDGRELPATALRREGDGLRLRLDRRGHASGPLWLEQGGRSSN PVWLTLNGSHVLAAGPDEVAKNMDGLTTYVDLVSLLIEENHDGRREAERLADKYGARV VGAIPPLNLYQLRLPARDLVQRDALVLRIGSETSVDAVVVEESAPEKGEETEAARRPV DKPDSDSDEWAANRFMDAVNYYQRRVRARQAPLETRPVRIGVIERDVDFDAPDFADYL GPCKAPAPRTCLYARDAERPDNHGSTVAGILAARWDQGGNSGFLRGLDRASQGFEVIV ERNSDAGITANVAASVNLVEDGVRVLNWSWGIHRVGARDVDGDEVDSLVRSGIAMSGY EELLEEFFLWLRKEHPDVLVVNSAGNGSSYSGTDEYRLPSSFVTEQLLVVGGHQRSER QGLAVDDPAYAVKRSTSNVDMRVDVTAAACTHASTLERDARGEVHCGTSYATPMVAGT VAAMLSLNPRLRPEEIRMLLRRSAMTIGGDYDFEPADAEDLTAPILPSERGYRLDHRD VGRSARLDMQKALDLAVKSRERVR" misc_feature 1344218..1345045 /locus_tag="PA1242" /note="Peptidase domain in the S8 and S53 families; Region: Peptidases_S8_S53; cd00306" /db_xref="CDD:173787" misc_feature order(1344347..1344349,1344542..1344544,1344947..1344949) /locus_tag="PA1242" /note="active site" /db_xref="CDD:173787" misc_feature order(1344347..1344349,1344947..1344949) /locus_tag="PA1242" /note="catalytic residues [active]" /db_xref="CDD:173787" gene complement(1345248..1347824) /locus_tag="PA1243" /db_xref="GeneID:881234" CDS complement(1345248..1347824) /locus_tag="PA1243" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sensor/response regulator hybrid protein" /protein_id="NP_249934.1" /db_xref="GeneID:881234" /translation="MAQPFTIEPDPNPLDHPPAFLANGGAVGKLLLSLDAASSPLGPP DAWSASLKTTMATLLPAKAQIVLFWGAEFVALYNDAYAPSIGDKHPRALGRPAIENWR ELWDDLEPLLRGVYETGETFAAKDRPFYIERHGRGETVYFDVSYSAVRETDGSVGGVL CIVTETTERVRFERRQAFLLELGQTLPSLADPLEIEATALRRLGEELGASRIFFGEDN GDGMTFQVHRDYLHDGRSAVGRHRYLSFGATLSGELHAGRSVAREDLAGERGMSLDEA ASRARLGLGATLHVPVLRHGRLEALLAIHFAHPQALGEDPRRLAEEAAKLAWTSLTHA RAELALRTSSAQLAAMFDQASAGIAVCDRNWRFTRVNDRYCEIAGRSRETLLGLRMQD ILAPADFALPAAPGGATGAAFEMSGRYVRPDGDTVWVQNQVTPLVDEQHAASGLLCVC MDISARVRAENELRELNESLEERVATMLAQRESALAQLHEARKMEMVGQLTGGIAHDF NNLLTPIMASLELIRRRLDDARSTDLIDGALQSAERARNLVGRLLTFARRQTLKPQAV ALRELVEGMHDLIERSLDPTIEVRIEIPERLPAVVVDPHQFELAILNLAVNARDAMGE GGRLEIGARTDLVIDGAVDGLGAGRYVCLEVADNGGGMPAEVLARCMEPFFSTKGVGK GTGLGLSMVQGLVAQSGGGLGIHSEIGKGTRVSIWLPITAEQTQSTAESCPDAPEASR PTHVLLVDDDRMVRYTTALLLGDLGYQVSEAASAEEALGEVERGLAPDLLVTDHLMAD KTGVQLAEELRQRFPQLPVLVITGYANLRPEQLNGFEVLTKPFRHNELAERLARLLEA SP" misc_feature complement(1347312..1347635) /locus_tag="PA1243" /note="PAS fold; Region: PAS_4; pfam08448" /db_xref="CDD:312075" misc_feature complement(1345656..1347224) /locus_tag="PA1243" /note="Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms]; Region: COG4251" /db_xref="CDD:443393" misc_feature complement(1345257..>1346384) /locus_tag="PA1243" /note="histidine kinase; Provisional; Region: PRK13557" /db_xref="CDD:237425" protein_bind complement(1346495..1346507) /locus_tag="PA1243" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(1348060..1348401) /locus_tag="PA1244" /db_xref="GeneID:881242" CDS complement(1348060..1348401) /locus_tag="PA1244" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249935.1" /db_xref="GeneID:881242" /translation="MTLRNGVPSMTKDEKEKTHVDAIIERYKDLMVEIPPADRQPGLS LLWPVPAQPAIDKGVRQAENWLADQIEGQLWTAFAFGRDSLPTPMQKTAFEVAFLTRL QQRLVAARRSG" misc_feature complement(1348084..1348296) /locus_tag="PA1244" /note="LasR-specific antiactivator QslA chain E; Region: QslA_E; pfam18226" /db_xref="CDD:436356" protein_bind 1349079..1349094 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA1246, PA1247, PA1245, PA1248'" /bound_moiety="LasR" gene 1349416..1350660 /locus_tag="PA1245" /db_xref="GeneID:881251" CDS 1349416..1350660 /locus_tag="PA1245" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249936.1" /db_xref="GeneID:881251" /translation="MGLFNAAANLFGQVYERATQVAATAVTAVADVARTLVGSTVDAV EQQVHEALTSVHDAVASVEQALEGTVGAVAGTLGEIAGDALDTVGSAVGTLGGLAGNS LAIADDLLHGRVEPEDYLKLVGDLGQGVGATVGHAWEFGSDSLKAANDLYHAAYQGGS LSLGNSDGLLGVNVIGSLLGGNHDQGVIPDSRGILGPLPINVSFTEQGLTFGGETPLT PLVTAALALNPITAPLVPVLAPLNLGGLGVVGSVDKEGFSAKFYGIAGPSYNLGVANL GGTLELGSYNEVKLLSWNEVTLKDLPIVGGILGYVPVVKDIGVSLPTLDLHFDSKLYA QTIAGVDVAGVGPKGQIELVHDLDNDLSIVAGIAGDTAHSALDGAGKVLAALLGHGGE AAPPTIQLIGADPAPEHQALAA" gene 1350747..1352528 /gene="aprD" /locus_tag="PA1246" /db_xref="GeneID:881263" CDS 1350747..1352528 /gene="aprD" /locus_tag="PA1246" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alkaline protease secretion ATP-binding protein AprD" /protein_id="NP_249937.1" /db_xref="GeneID:881263" /translation="MARLGSSVTNEIKQALAASRGALRSVAAFSGVINLLMLVPSLYM LQVYDRVLSSANEVTLLMLTLMALGVFVFMGALEALRSFVLVRVSERFDGQLHGRIYA AAFERNLRAGGQEASQALHDLTTLRQFITGQALFAFFDAPWFPVYLLVIFLFDPWLGL LSLVGALALMALAWFNERATRAPLAKAGELSIKSGQLASNNLRNAEVIEAMGMLGSMR GRWERLHQAFLDQQSLASERAARINALSKYLRIALQSLVLGLGAWLAVEGRITPGMMI AGSILMGRALGPIDQLIGVWKQWGAARDAYRRLSGLLDEFPARERRMELPEPRGHLLL ESLDAAPPGSEARTLRGLTLAIPAGSVVGVIGPSGSGKSSLARVVLGIWPTLHGSVRL DGAEIRQYERETLGPRIGYLPQDIELFAGTVAENIARFGEVQADKVVEAARLAGVHEL VLRLPQGYDTVLGVGGAGLSGGQRQRIALARALYGAPTLVVLDEPNSNLDDSGEQALL AAIQALKARGCTVLLITHRAGVLGCADRLLALNAGQLHLYGERDQVLAALNNQRAASA SQQRADYRVAGYGAPQVVAAPRQGGVE" misc_feature 1350792..1352420 /gene="aprD" /locus_tag="PA1246" /note="type I secretion system ABC transporter, PrtD family; Region: type_I_sec_PrtD; TIGR01842" /db_xref="CDD:200134" gene 1352525..1353823 /gene="aprE" /locus_tag="PA1247" /db_xref="GeneID:881276" CDS 1352525..1353823 /gene="aprE" /locus_tag="PA1247" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alkaline protease secretion protein AprE" /protein_id="NP_249938.1" /db_xref="GeneID:881276" /translation="MTRTVKRDENAYARLGWLLVLFGFGGALLWAAFAPLDQGVAVPA TVIISGQRKSVQHPLGGVVKHILVRDGQHVEAGEPLIRMEPTQARANVDSLLNRYANA RLNQARLQAEYDGRRTLEMPAGLAEQAPLPTLGERLELQRQLLHSRQTALANELSALR ANIEGLRAQLEGLRQTEGNQRLQQRLLNSQLSGARDLAEEGYMPRNQLLEQERQLAEV NARLSESSGRFGQIRQSIAEAQMRIAQREEEYRKEVNGQLAETQVNARTLWEELSSAR YELRHAEIRAPVSGYVAGLKVFTDGGVIGPGELLMYIVPNSDSLEVEGQLAVNLVDRI HSGLPVEMLFTAFNQSKTPRVTGEVTMVSADRLLDEQNKQPYYALRAQVDAAAMGKLK GLQIRPGMAVQVFVRTGERSLLNYLFKPLFDRAHVALAEN" misc_feature 1352561..1353817 /gene="aprE" /locus_tag="PA1247" /note="Cation efflux system protein CusB domain 1; Region: CusB_dom_1; cl46872" /db_xref="CDD:481212" gene 1353827..1355272 /gene="aprF" /locus_tag="PA1248" /db_xref="GeneID:881227" CDS 1353827..1355272 /gene="aprF" /locus_tag="PA1248" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alkaline protease secretion protein AprF" /protein_id="NP_249939.1" /db_xref="GeneID:881227" /translation="MTMRRLMTWLFGAFLLLLREDAFALGLLDGYHLALENDPQFQAA IQEHEAGRQYRALGRAALLPRLVYSYNRGRSWSDVTQTTTRGDFKEDRDYDSYVSTLS LQQPLFDYEAFSRYRKGVAQALLSDERFRSQSQELLVRVLEAYTGALLAQDQIELARA QKRSYREQFQLNQRQFERGNGTRTDTLETQARFNLAQAQEIEARDSQDAALRELERLV GAPLEIADLAPLGERFQVRPLSPASYTAWRDLALAENPELASLRHAVDVARYEVEQNR ADFLPRLGLYASTGKSKSGSENTYNQRYETDSVGIQLSVPLFSGGETLAATRQATHRM EKSHYDLDDKVRETLNQVRKMYNQSSSSAAKIRAYEMTVDSARTLVMATRKSIAAGVR VNLDLLNAEQALYSAMNELSKAKYDYLTAWARLRFYAGVLDEADLELVAANFVSGETP ARRRDCATTDCPAPLHTLSKTDTEENRSALN" misc_feature 1353893..1355164 /gene="aprF" /locus_tag="PA1248" /note="type I secretion outer membrane protein, TolC family; Region: type_I_sec_TolC; TIGR01844" /db_xref="CDD:273829" gene 1355631..1357070 /gene="aprA" /locus_tag="PA1249" /db_xref="GeneID:881248" CDS 1355631..1357070 /gene="aprA" /locus_tag="PA1249" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alkaline metalloproteinase" /protein_id="NP_249940.1" /db_xref="GeneID:881248" /translation="MSSNSLALKGRSDAYTQVDNFLHAYARGGDELVNGHPSYTVDQA AEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGKFSAFSAQQQ AQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKGQSW YLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDTR AYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSNTER DFYSATSSSSKLVFSVWDAGGNDTLDFSGFSQNQKINLNEKALSDVGGLKGNVSIAAG VTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGADTFVYGDIAE SSAAAPDTLRDFVSGQDKIDLSGLDAFVNGGLVLQYVDAFAGKAGQAILSYDAASKAG SLAIDFSGDAHADFAINLIGQATQADIVV" misc_feature 1355667..1357067 /gene="aprA" /locus_tag="PA1249" /note="serralysin family metalloprotease; Region: Zn_serralysin; NF035945" /db_xref="CDD:468274" gene 1357317..1357712 /gene="aprI" /locus_tag="PA1250" /db_xref="GeneID:881261" CDS 1357317..1357712 /gene="aprI" /locus_tag="PA1250" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alkaline proteinase inhibitor AprI" /protein_id="NP_249941.1" /db_xref="GeneID:881261" /translation="MSASAKLSRMVCLLCGFFSTGISMASSLILLSASDLAGQWTLQQ DEAPAICHLELRDSEVAEASGYDLGGDTACLTRWLPSEPRAWRPTPAGIALLERGGLT LMLLGRQGEGDYRVQKGDGGQLVLRRATP" misc_feature 1357404..1357694 /gene="aprI" /locus_tag="PA1250" /note="Protease inhibitor Inh; Region: Inh; pfam02974" /db_xref="CDD:427087" gene complement(1357725..1359350) /locus_tag="PA1251" /db_xref="GeneID:881281" CDS complement(1357725..1359350) /locus_tag="PA1251" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_249942.1" /db_xref="GeneID:881281" /translation="MLLRRIAITPRAVIGFAILASLLVALGLFAHNRMGSLNRAAKDI GEVWLPSVEASAQLSGLMSELRLGEMNHVLLHDATRMRQQEQRMDEVIATLARVEREY RPLLVLDEERALLDQFVQRQQEYLEGHAALLALSRDNRTDEASVLMGGAQLQRYEQVQ RTLKQLIALDREAARASTAEAADVYSRASTAILAVLLVALAASVTIAWLLTRSIVVPI RQAVSCADRIAARDLTGEIASDGDDEPAQLMKAMRSMQASLHDTIEQIGDSAALLAAA AEQLNAVTEEGNRSLARQNDEIEMAATAVNEMSAAVEEVARNASSTAEASSLSERAAG NGRARVGQTVRSIRQMNAEIGQTARLVEGLASQAQDIGKVLDVIRAIAEQTNLLALNA AIEAARAGEQGRGFAVVAEEVRALAHRTQQSTHEIEGMIASVREGTDTAVSAMRENDQ RARQMLDEAEAADHALGEIAEHATRINERTLVIASAAEEQAHVAREVDHNLVNIRDVA VQTTQGAEQTRGASHELSRLANDLKGMIGRFVV" misc_feature complement(1357728..1359305) /locus_tag="PA1251" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene 1359590..1360594 /locus_tag="PA1252" /db_xref="GeneID:881290" CDS 1359590..1360594 /locus_tag="PA1252" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="bifunctional Delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2- carboxylate reductase" /protein_id="NP_249943.1" /db_xref="GeneID:881290" /translation="MIRMTLDEVRELAVRILRRHAFSEAHVQAVADTLVAGERDECAS HGIWRLLGCIATLKAGKVSADAEPELHDIAPGLLRVDAHGGFSQCAFRLGLPHLLEKA RSQGIAAMAVNRCVHFSALWVEVEALTEAGLVALATTPSHAWVAPAGGRKPIFGTNPI AFGWPRPDGPPFVFDFATSAVARGEIQLHERAGKPIPLGWGVDEQGEPTTDASAALRG AMLTFGGHKGSALAAMVELLAGPLIGDLTSAESLAYDEGSRSSPYGGELLIAIDPRRM LGASAEEHLARAETLFEGIVEQGARLPSQRRFEARERSARDGVTIPEALHRELLALLE " misc_feature 1359593..1360585 /locus_tag="PA1252" /note="Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family [Energy production and conversion]; Region: AllD; COG2055" /db_xref="CDD:441658" gene complement(1360698..1362278) /locus_tag="PA1253" /db_xref="GeneID:881455" CDS complement(1360698..1362278) /locus_tag="PA1253" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="semialdehyde dehydrogenase" /protein_id="NP_249944.1" /db_xref="GeneID:881455" /translation="MPSILGHNYVGGARSAAGNLTLRSLDADSGEALPYAFVQATEAE VDAAARAAERAYPHYRQLSATRRAGFLEAIASRLDALGDDFVALVRRETALPAARIEG ERTRTANQLRLFAEVLRRGDFHGVRIDRGQPGRTPPRPDLRQWRIGLGPVAVFGASNF PLAFSTAGGDSAAALAAGCPVVVKAHGGHMATAECVADAILQAAADSGMPDGVFNMVY GSGVGEALVRHPAIRAVGFTGSLKGGRALCDLAAARPQPIPVFAEMSSINPLVVLPEA LRRRGRQVAEELAASVTLGCGQFCTKPGLVLGLRSPGFDAFVAALGEALAARPAQSML NAGTLRSYVEGLQRLERHPGIRRLAGAPQEGRQAHPQLFKADVGLLLEGDELLQEEVF GPATVVVEAADEEQLARALDNLHGQLSATLIGEADDLAAFAGLVPLLERKAGRLLFNG YPTGVEVCDAMVHGGPYPATSDARGTSVGTLAIERFLRPLCYQDYPDSLLPDALKNAN PLGLLRLVDGRSTREALD" misc_feature complement(1360797..1362104) /locus_tag="PA1253" /note="Alpha-Ketoglutaric Semialdehyde Dehydrogenase; Region: ALDH_KGSADH; cd07129" /db_xref="CDD:143447" misc_feature complement(order(1360800..1360811,1360815..1360820, 1360878..1360883,1360893..1360898,1360911..1360913, 1360935..1360937,1360941..1360952,1360956..1360958, 1360968..1360970,1360980..1360982,1361043..1361045, 1361535..1361537,1361544..1361546,1361847..1361849, 1361853..1361855,1361892..1361894,1362096..1362098)) /locus_tag="PA1253" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143447" misc_feature complement(order(1361550..1361552,1361559..1361561, 1361568..1361570,1361607..1361609,1361718..1361723, 1361727..1361729,1361805..1361807)) /locus_tag="PA1253" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:143447" misc_feature complement(order(1361379..1361381,1361388..1361390, 1361490..1361492,1361802..1361804)) /locus_tag="PA1253" /note="catalytic residues [active]" /db_xref="CDD:143447" gene complement(1362371..1363288) /locus_tag="PA1254" /db_xref="GeneID:881320" CDS complement(1362371..1363288) /locus_tag="PA1254" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate synthetase" /protein_id="NP_249945.1" /db_xref="GeneID:881320" /translation="MSKHVNWSGVFPAVTTQFNADFSVNLEETHTVISNLVRDGVSGL VVCGSVGENTSLTIEEKMAVTEVAKDASGGRVPVICGIAEFTSAGAAKVAKAVERVGV DGIMVMPALVYSSKPHETAEHFRSVASGTDLPVMVYNNPPIYRNDVTPDILVSLADCE NIVCFKDSSGDTRRFIDVRNQVGERFILFAGLDDVVLESVAVGAQGWISGMSNVFPKE GETIFRLARAGRFAEAMPIYEWLMPILHLDARPDLVQCIKLCEQLAGRGSALTRPPRL ALRGADREHVERIMAKALASRPALPDVGL" misc_feature complement(1362410..1363273) /locus_tag="PA1254" /note="4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism, Cell wall/membrane/envelope biogenesis]; Region: DapA; COG0329" /db_xref="CDD:440098" gene complement(1363439..1364473) /locus_tag="PA1255" /db_xref="GeneID:881287" CDS complement(1363439..1364473) /locus_tag="PA1255" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="trans-3-hydroxy-L-proline dehydratase" /protein_id="NP_249946.1" /db_xref="GeneID:881287" /translation="MRSQRIVHIVSCHAEGEVGDVIVGGVAAPPGATLWEQSRWIARD QDLRNFVLNEPRGGVFRHANLLVPAKDPRAQMGWIIMEPADTPPMSGSNSLCVATVLL DSGILPMREPLTRLLLEAPGGLIEARAECRDGKAERVEIRNVPSFADRLDAWIEVEGL GSLQVDTAYGGDSFVIADARRLGFALRADEAAELVATGLKITHAANEQLGFRHPTNPD WDHLSFCQLAAPPERRDGVLGANNAVVIRPGKIDRSPCGTGCSARMAVLQAKGQLRVG ERFVGRSIIGSEFHCHIESLTELGGRPAILPCLSGRAWITGIHQYLLDPDDPWPQGYR LSDTWPGGHC" misc_feature complement(1363472..1364449) /locus_tag="PA1255" /note="Proline racemase; Region: Pro_racemase; pfam05544" /db_xref="CDD:398923" gene complement(1364499..1365221) /locus_tag="PA1256" /db_xref="GeneID:881300" /db_xref="PseudoCap:PA1256" CDS complement(1364499..1365221) /locus_tag="PA1256" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="amino acid ABC transporter ATP binding protein" /protein_id="NP_249947.1" /db_xref="GeneID:881300" /db_xref="PseudoCap:PA1256" /translation="MIEINDVHKAYGQFEVVKGVDLRVDKGEVLSIIGGSGSGKSTLL MCINGLEPIQRGSIRVDGIDVHARGTDLNRLRRKIGIVFQQWNAFPHLTVLENVMLAP RKVLGKSRAEAEAMALKQLTHVGLGDKLKVFPQRLSGGQQQRMAIARALAMSPDYMLF DEATSALDPQLVGEVLDTMRLLAEEGMTMVLVTHEIRFARDVSDRVAFFRNGLVHEIG PPDQVIGNPQRPETVEFLRSVL" misc_feature complement(1364505..1365221) /locus_tag="PA1256" /note="ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; Region: GlnQ; COG1126" /db_xref="CDD:440743" gene complement(1365218..1365862) /locus_tag="PA1257" /db_xref="GeneID:881306" /db_xref="PseudoCap:PA1257" CDS complement(1365218..1365862) /locus_tag="PA1257" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="amino acid ABC transporter permease" /protein_id="NP_249948.1" /db_xref="GeneID:881306" /db_xref="PseudoCap:PA1257" /translation="MFTTSLTANDLLFLLQGAWTTLAITAMAMLIGTLLGVVFGLLRA LLPRASLPLAALLDVFRSVPLLIQFVLLNSFKSILGLDWSAFAVACLVLGVYAAAYCA EVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNLTLSVMKDTSL VLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVVARLGARLERRWQQ" misc_feature complement(1365227..1365862) /locus_tag="PA1257" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" gene complement(1365873..1366538) /locus_tag="PA1258" /db_xref="GeneID:881324" CDS complement(1365873..1366538) /locus_tag="PA1258" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_249949.1" /db_xref="GeneID:881324" /translation="MFDYTFHWRSAFNALPEMLAGSLVTLQVTALSMLFGILIALLLA FARLGGNRPLRAAAGAWISIARNTPALFQIYILYFGLGSFGLHVSSWFALLAGVTFNN AGYLAETFRGGLQAVPETQLRAARSLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAM LMTSLGVVVGLTDDLTGVTQALNVKTFRTFEYFALAAVLYFAMAKLLVLAARLLGWRL FRY" misc_feature complement(1365876..1366529) /locus_tag="PA1258" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" gene complement(1366538..1368280) /locus_tag="PA1259" /db_xref="GeneID:881330" CDS complement(1366538..1368280) /locus_tag="PA1259" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249950.1" /db_xref="GeneID:881330" /translation="MKHAHLIVPRTLVAGSASGELLYAPTGLSFWGGVDPRSAEVIDR HHPLSGRHLHGRLLAIPGGRGSCTGSSVLLELILGGRAPAAILLREPDEILALGAIVA EELFGRSLPIACLGERFDELAAYPWARLADGRLELHRDAPPPLEARPAEALATDAGPR LDAFDQALLAGEHGEAARLAMRIVLRMAALQGAQRLIDIQRAHIDACIYTGPAGLRFA ETLRDLGARVRVPTTLNAISVDQRRWREQGVPAALGEPAAALARAYLDMGAQPSFTCA PYLLDDSARAGEQIVWAESNAVLFANSVLGARTNKYADFMDICCALTGRAPLAGCHLD EQRQARVLIEVEDLGSVDDAFYPTLGYLCGLLCDGQIPAIDGLRQRQPDHDALKAFGA ALGTSSSVPMFHVIGVTPEAPDLASAFGGRAPRRTLRVGRERLRDAWRELDSAGETRI DLVALGNPHFSASEFAQLAALCHGRRRHPEVALVITSSRQVVAQAEAAGHLATLQAFG ARLVTDTCWCMLDEPLVPPGARTLMTNSAKYAHYAPGLVGRQVRFAGLAGCVEAAVGG RSPAGLPAWLSEDC" misc_feature complement(1367930..1368247) /locus_tag="PA1259" /note="Putative Aconitase X swivel domain. It is predicted by comparative genomic analysis. The proteins are mainly found in archaea and proteobacteria. They are distantly related to Aconitase family of proteins by sequence similarity and seconary structure...; Region: AcnX_swivel; cd01356" /db_xref="CDD:238658" misc_feature complement(1368077..1368085) /locus_tag="PA1259" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238658" misc_feature complement(1366565..1367803) /locus_tag="PA1259" /note="Mevalonate 5-phosphate dehydratase subunit 1, aconitase superfamily (modified mevalonate pathway) [Lipid transport and metabolism]; Region: AcnX1; COG1679" /db_xref="CDD:441285" gene complement(1368339..1369160) /locus_tag="PA1260" /db_xref="GeneID:881316" /db_xref="PseudoCap:PA1260" CDS complement(1368339..1369160) /locus_tag="PA1260" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="amino acid ABC transporter substrate-binding protein" /protein_id="NP_249951.1" /db_xref="GeneID:881316" /db_xref="PseudoCap:PA1260" /translation="MNTKKTLALALTAALGCSLAGLAQADKLDDIIESGKLRCAVTLD FPPMGSRDAQNNPVGFDVDYCNDLAKALDVKAEIVETPFPDRIPALVSGRADVIVAST SDTLERAKTIGMSIPYFAFVKVVLTREDTGIASYEDLKGRPVGGTAGTFEALALEKDS KAWGDAKGSFRAYQSEADTALAISQGHIDATVVSSTVAASWIKSGKYKGLKIAGDAPY DIDYVALGAKRNEYGLLNYLNLFINQQVRTGRYAELAQKWVGGTAPELTTSAVYR" misc_feature complement(1368384..1369079) /locus_tag="PA1260" /note="The substrate binding domain of putative amino acid transporter; the type 2 periplasmic binding protein fold; Region: PBP2_Atu4678_like; cd13696" /db_xref="CDD:270414" misc_feature complement(order(1368492..1368494,1368579..1368584, 1368708..1368713,1368837..1368839,1368858..1368860, 1368903..1368905,1369026..1369028,1369035..1369037)) /locus_tag="PA1260" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:270414" misc_feature complement(order(1368627..1368629,1368636..1368638, 1368996..1368998,1369008..1369010)) /locus_tag="PA1260" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:270414" gene complement(1369418..1370092) /locus_tag="PA1261" /db_xref="GeneID:881351" CDS complement(1369418..1370092) /locus_tag="PA1261" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249952.1" /db_xref="GeneID:881351" /translation="MPGVVFFVKDERARYVLVNRTLARRCGVKDKAELLGRSADEVFP SSLGPLYAEQDRRVLRGGATLENQLELHLYPGRQPGWCLTHKQALRDADGAIIGMAGI SHDLPAAQSAHPAYGRLAAVDAHIREHYDQPLSLADLTAIAGLSVAQLERHCKRIFQL TPRQMIHKARLGAASQLLAGDAPITEIALRCGYTDHSAFSRQFKALTGLSPSQYRETH RQPRKA" misc_feature complement(1369775..1370083) /locus_tag="PA1261" /note="PAS fold; Region: PAS_4; pfam08448" /db_xref="CDD:312075" misc_feature complement(1369427..>1369741) /locus_tag="PA1261" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene complement(1370257..1371699) /locus_tag="PA1262" /db_xref="GeneID:881309" CDS complement(1370257..1371699) /locus_tag="PA1262" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_249953.1" /db_xref="GeneID:881309" /translation="MPSTVSSSRLGLAGLCILLAGQLLPMIDFSIVNVALDALAHSLG ASETELELIVAVYGVAFAVCLAMGGRLGDNYGRRRLFVLGVALFAVASLLCGLAGSVW LLLVARALQGVGAALVVPQILATLHVSLSGHAHSRALAAYGAIGGLAFVVGQVLGGFL VSADIGGLGWRSVFLINLPICLGILLCSRRWVPETRAEHAARVDAPGTLLLAALILCL LLPLALGPSLHWSWPCALLLAAAVPLLAWLWRTELRQERRQAWPLLPPSLLRLPSIRF GLLLAILFFACWSGFMFALALALQAGAGLSPVQAGNAFIALGASYFVSALLTARVAAR IGPVRLLLLGCVIQMCGLLGLMLTLQRVWPQPGILNLAPATLVIGFGQAFIVSSFFRI GLSEVPAAQAGAGSAMLATVQQASLGLGSALLGAVFAHRLERHGDYLEATQTTLAVEF VLMTLLLGATCLFYLRRVRTVPLRCDSPGN" misc_feature complement(1370356..1371648) /locus_tag="PA1262" /note="Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_MMR_MDR_like; cd17321" /db_xref="CDD:340879" misc_feature complement(order(1370449..1370451,1370458..1370463, 1370470..1370475,1370482..1370484,1370530..1370532, 1370542..1370544,1370554..1370559,1370725..1370727, 1370737..1370739,1370821..1370823,1370830..1370838, 1370845..1370850,1370857..1370859,1371250..1371252, 1371259..1371264,1371271..1371273,1371331..1371333, 1371340..1371348,1371352..1371357,1371505..1371507, 1371601..1371603,1371610..1371615,1371622..1371627)) /locus_tag="PA1262" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340879" gene 1371738..1372682 /locus_tag="PA1263" /db_xref="GeneID:881379" CDS 1371738..1372682 /locus_tag="PA1263" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249954.1" /db_xref="GeneID:881379" /translation="MRFWLTRYQFLLILVLALPVCPSEDFAMPLDAPASHAAESPAQP SRAEQLGAFLRRRRESIEPQRVGISRLGRRRTPGLRREEVAQLAGVGVTWYTWLEQGR AVRASEQVIGAIARALLCNETETHHLFNLAGLAAPTSARRAVCEKPSAATQAILDALD PLPAMVQNARFDIRGYNRAYCRLVGIDLAEIPEEDRNCIYLALTHERWRYCMANREEA LPRMVGFFRAAMVERMGDPLWERQLQRCLEASAEFREIWRRNEVMGIENQLKRFRHAR CGEFELQQTNWWSAPKNGDRLLVFVPLDDHARDCLEQL" misc_feature 1371882..1372121 /locus_tag="PA1263" /note="Helix-turn-helix domain; Region: HTH_31; pfam13560" /db_xref="CDD:433309" misc_feature order(1371957..1371959,1372032..1372034) /locus_tag="PA1263" /note="salt bridge [active]" /db_xref="CDD:238045" misc_feature order(1371978..1371983,1372014..1372016,1372023..1372025, 1372035..1372040) /locus_tag="PA1263" /note="sequence-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" misc_feature 1372182..1372679 /locus_tag="PA1263" /note="MmyB-like transcription regulator ligand binding domain; Region: MLTR_LBD; pfam17765" /db_xref="CDD:465492" gene complement(1372979..1373845) /locus_tag="PA1264" /db_xref="GeneID:881381" CDS complement(1372979..1373845) /locus_tag="PA1264" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249955.1" /db_xref="GeneID:881381" /translation="MSANLDIELLRTFHAILRFGRFLAAASHLNRSPSAVSTHVRRLE ELAGGRLFERDNQSVRLTPLGQRFQRQTAELLETHDRVLAGLRRREEPLRVRFGISEE YAGKLLGRLLPRLGAELPALELEVLTDASGRLAGRLRRGQLDLALLVQAQDETPYDGH SREIGGTQPVWVAGHGLRIDPQRPLPLALHGQGCPYRQALLEALGATGRRWRTVVSSP GATALEAAIEGGLAIGVIDRARVGPTMRVLGPAEGFAELPAHRIRLAFAPGERPPALE RLGELIAEEFRL" misc_feature complement(1373648..1373827) /locus_tag="PA1264" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(1373000..1373566) /locus_tag="PA1264" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" misc_feature complement(order(1373159..1373164,1373168..1373173, 1373189..1373206,1373462..1373482,1373486..1373488, 1373498..1373500,1373507..1373512,1373516..1373521)) /locus_tag="PA1264" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176130" gene 1373945..1374847 /locus_tag="PA1265" /db_xref="GeneID:881343" CDS 1373945..1374847 /locus_tag="PA1265" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249956.1" /db_xref="GeneID:881343" /translation="MRATTCTPRAMPGATRLLAVQLGMVLAWSSGFVGYRYAMEQAPV FLTSFWRFAVCLALLLPFAWAGLRRLSARQWRRQALIGALAYAGYIAPIAKAIELGVS PGVAALMADLLPLLVALLALVLPGQRTRPGQWPGIALGVAGVLWAGHAALALGRAPGW AYGLPLLGMLALALATLLQKRWDDAPGSLAVVLFVQIGAALPAFAGLALAEGSLRPPL SGGFLFGLAWLVLLPTFGGYGLYWLGLRHLSAQGGSAALYLSPALTLLWAHWMFAEPL TPMLLGGLLLSLAGLGWLYRAERR" misc_feature 1374008..1374781 /locus_tag="PA1265" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene complement(1374844..1376097) /locus_tag="PA1266" /db_xref="GeneID:881372" CDS complement(1374844..1376097) /locus_tag="PA1266" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_249957.1" /db_xref="GeneID:881372" /translation="MSADYDLLIVGAGPAGLAAALAAAPSGARIALVDDNPAAGGQIW RDGPRASLPPRAHQMRQRLAGQANVEHFPATRVVACGPGRRLLLEDPQRGWQVGYRRL VLCTGARELLLPFPGWTLPGVTGAGGLQALAKGGLPLAGQRLVVAGSGPLLLASAASA SQCGARLLRVAEQAPARTLAAFAVRLPRWPGKLWQAAGLFARSYRADSYVLAALGEER LEAVRLREGGRVREIACERLACGFGLVPNVQLGQALGYRLDGPALAVDEWQAGSLPDH YAAGECTGFGGSELALVEGAIAGHAAVDERDAARRLWPRRRRWQGFADTLARHFALRA ELRQLAEADTLVCRCEDVPLAALAGHAGWTEAKLHSRCGMGACQGRICGSAAQFLFGW TPPAPRPPFSPARLETLARWQGDAG" misc_feature complement(1375243..1376013) /locus_tag="PA1266" /note="NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism]; Region: FadH2; COG0446" /db_xref="CDD:440215" misc_feature complement(1374928..1375068) /locus_tag="PA1266" /note="[2Fe-2S]-binding domain of bacterioferritin-associated ferredoxin (BFD) and related proteins; Region: Fer2_BFD-like; cl40433" /db_xref="CDD:394803" gene complement(1376327..1377442) /locus_tag="PA1267" /db_xref="GeneID:881399" CDS complement(1376327..1377442) /locus_tag="PA1267" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249958.1" /db_xref="GeneID:881399" /translation="MNAEVIVVGAGIVGSACAHELARRGLDVLVLDSRRGGATAVGMG HLVAMDDNPAELALSDYSTQAWRAWAAELPEDCAYRGCGTLWLAADASELAEAERKRQ ALQAAGVACRMLGAARLYALEPALRPGLAGALEVSGDGILYAPNAARWLLDQAGPRLR RLYAEVSEVDGSRLRLADGRWLSAEALVLANGIHAGELCAELPIRPKKGHLLITDRYP GTLRHQLVELGYVSSAHASSGTSVAFNAQPRPTGQVFLGSSRQFDTLDPQVEGPVLAR MLRRALDYLPGLAGLNAIRAWTGFRAATPDGLPLLGEHPAQPGLWLAVGHEGLGVTTA PGSARLLAAQLFGETPPLDPTPYLPQRFLSSSGSARP" misc_feature complement(1376360..1377442) /locus_tag="PA1267" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" protein_bind 1377294..1377306 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(1377439..1378383) /locus_tag="PA1268" /db_xref="GeneID:881376" CDS complement(1377439..1378383) /locus_tag="PA1268" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="4-hydroxyproline 2-epimerase" /protein_id="NP_249959.1" /db_xref="GeneID:881376" /translation="MQRIRIIDSHTGGEPTRLVIGGFPDLGQGDMAERRRLLGERHDA WRAACILEPRGSDVLVGALLCAPVDPEACAGVIFFNNSGYLGMCGHGTIGLVASLAHL GRIGPGVHRIETPVGEVEATLHEDGSVSVRNVPAYRYRRQVSVEVPGIGRVSGDIAWG GNWFFLVAGHGQRLAGDNLDALTAYTVAVQQALDDQDIRGEDGGAIDHIELFADDPHA DSRNFVLCPGKAYDRSPCGTGTSAKLACLAADGKLLPGQPWRQASVIGSQFEGRYEWL DGQPGGPIVPTIRGRAHVSAEATLLLADDDPFAWGIRR" misc_feature complement(1377448..1378383) /locus_tag="PA1268" /note="Proline racemase; Region: Pro_racemase; cl42407" /db_xref="CDD:478179" gene complement(1378500..1379168) /locus_tag="PA1269" /db_xref="GeneID:881367" CDS complement(1378500..1379168) /locus_tag="PA1269" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249960.1" /db_xref="GeneID:881367" /translation="MLNAPNLGIAPSASEIIAKHLREAIIAGHFAEDEPIRQDDIAQL FNVSKIPVREALKRLEAEGLVLFQRNKGAVVTRISEPELAQMFEVRVLLEVQAIRLAV PNMDEATFARAEAICADFVGEDNVGRWAELNWQLHACLYEPAQRPFLVNLIRSIHDKL ERYLRMQMSLSEGKQRADQEHREIVAACRAGDAERAATLIEAHIVGVCRTLYEHLPNR PAST" misc_feature complement(1378509..1379162) /locus_tag="PA1269" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: GntR; COG1802" /db_xref="CDD:441407" gene 1379413..1381452 /locus_tag="PA1270" /db_xref="GeneID:881362" CDS 1379413..1381452 /locus_tag="PA1270" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249961.1" /db_xref="GeneID:881362" /translation="MAKPSFFSSDLVQVLLCPRLHELQFAVKALLAGGLALYLAFGLE LEQPQWALMTVFVVSQPYSGMVLAKGMFRLIGTCAGALVSIGMVALYGQASLPFLLLM ALWLAFCTAGASLLHNHASYGFVLAGYTAAIVALPASADPATVFDQAVARCSEIGLGI LCAALVNVLLWPRRLERQLANQGKAAWEAGLQAAAAELRGADERGELLAALGRIAAAD AQRDHAWFEGALGRARSQALRVLGLDLLGLLRAARKVARERRLLDPASAHALQPWLEE LEALLREGRQAEFEACRQRLRLALDAAHGQLHLCLVCLERLLGEARAAGRSVEALVYG APTRQAPGAIAWHRDIERGVLFGLRSALAFLCVAAFWLASAWPSGLGAVSITGVVLSL FASRDNPAQAGLNFLRGILLSIPLAGFVALFYLPGVDGFPLLCLGLGVPLFFAALCVN RASLAGIASPFCIFFVKNVAPSNSMSYDLAHFLNNALSTVLGVAFAVLVFNLVSLRPG ERHYRRMLQATLGDLARLTLRSPAQAEAWFGGRTADRLIRLAQRYDRLPEGRRQPWSD GLMGLDFGDELLYLRQCLEEVPASLAQARDRYLRRLRLALLGDGPRAEREHALDPPTA RLLKALAASPLAGSERGELAGAALVQLQATWRQWCRSHAPAGTALRADPLPGAGR" misc_feature 1379479..1381392 /locus_tag="PA1270" /note="Fusaric acid resistance protein family; Region: FUSC; pfam04632" /db_xref="CDD:428044" gene 1381804..1383654 /locus_tag="PA1271" /db_xref="GeneID:881398" CDS 1381804..1383654 /locus_tag="PA1271" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="tonB-dependent receptor" /protein_id="NP_249962.1" /db_xref="GeneID:881398" /translation="MNRVFLTPAAVALCGASSLSLAEPVSLADQVVTATRTAQTASQS LAAVSVIDREDIERSQARSVPELLRQVPGVSLANNGGFGKNTTLFLRGTESDHVLVLI DGIKVGSASAGLTAFQDLPVELIERIEVVRGPRSSLYGSEAIGGVIQIFTRRGDGQGA KPFFSAGYGTHQTLEGSAGVSGGAGNGWYSLGVSSFDTAGINTKRAGTAGYEPDRDGY RNLSGNLRGGYRFDNGLELDGTLLRAKSHNDYDQVFGNSGFNANADGEQNLVGGRARF TPFDPWLVTLQAGRSEDKADAYQDGRFYSRFDTRRDSLSWQNDLTLAEGHVLTLGYDW QKDEISSSEAFSVDSRLNKGWFAQYLGQYGRQDWQLSLRRDDNQQFGVHDTGSAAWGY ALSDALRFTVSYGTAFKAPTFNELYYPDYGNPDLDAETSRSLEVGLSGTHGWGHWAVN AFRTNVDDLIGNDPRPAPGRPWGQPNNIDEARIRGVELVLGSQWLGWDWNANATFLDP QNRSGGVNDGNELPRRARRMFNLELDRRFERLSLGASVHAEGRRYDDPANKVRLGGYA TLDLRSEYRLNDEWRLQGRIANLFGADHETAYGYNQPGQAVYLSVRYQAL" misc_feature 1381804..1383648 /locus_tag="PA1271" /note="TonB-dependent vitamin B12 receptor; Region: TonB-B12; TIGR01779" /db_xref="CDD:273802" protein_bind complement(1382772..1382784) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1272" /bound_moiety="AmrZ" gene 1383718..1384329 /gene="cobO" /locus_tag="PA1272" /db_xref="GeneID:881408" CDS 1383718..1384329 /gene="cobO" /locus_tag="PA1272" /EC_number="2.5.1.17" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cob(I)yrinic acid a,c-diamide adenosyltransferase" /protein_id="NP_249963.1" /db_xref="GeneID:881408" /translation="MNESPEKDQRHRERMERKKAVVDEKIAQARDERGVLLVHSGNGK GKSSSAFGMVARALGHGMKVGVVQFIKGAASTGEEAFFRRFPEEVSYHVMGEGFTWET QDRQRDIAKAEAAWKVAAQLLADPDVGLVVLDELNIALKHGYLELDRVLADIQARPAM QHVVVTGRGAQPGMIEAADTVTEMSLVKHAFKAGIKAQKGVEF" misc_feature 1383751..1384326 /gene="cobO" /locus_tag="PA1272" /note="cob(I)yrinic acid a,c-diamide adenosyltransferase; Region: PRK05986" /db_xref="CDD:235662" misc_feature order(1383814..1383816,1383847..1383849,1383859..1383861, 1383871..1383876,1383880..1383897,1383940..1383942, 1383946..1383951,1383955..1383960,1384201..1384203, 1384240..1384245,1384249..1384272,1384279..1384281, 1384285..1384290,1384297..1384305,1384309..1384314, 1384318..1384326) /gene="cobO" /locus_tag="PA1272" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:410862" misc_feature order(1383841..1383861,1383883..1383885,1384120..1384122, 1384219..1384221,1384282..1384284,1384321..1384323) /gene="cobO" /locus_tag="PA1272" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:410862" misc_feature order(1383928..1383930,1383937..1383939,1384015..1384017, 1384129..1384131,1384141..1384143,1384219..1384221, 1384288..1384290) /gene="cobO" /locus_tag="PA1272" /note="hydroxycobalamin binding site [chemical binding]; other site" /db_xref="CDD:410862" gene 1384361..1385668 /gene="cobB" /locus_tag="PA1273" /db_xref="GeneID:881727" CDS 1384361..1385668 /gene="cobB" /locus_tag="PA1273" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="hydrogenobyrinate a,c-diamide synthase" /protein_id="NP_249964.1" /db_xref="GeneID:881727" /translation="MTQARCPALLIAAPASGQGKTTVTAALARLHARQGRRVRVFKCG PDFLDPMILARASGAPVYQLDLWMVGEAEARRLLARAAGEADLILIEGVMGLFDGNPS AADLARRFGVPVLGVINGAAMAQTFGALAYGLAHFQPDLPFSGVLGNRVGSQRHSDIL RDCLPPGMRWFGGLPRSAEFELPSRHLGLVQAEELADLDARLDAAADALRASAETDLP EPVTFEVPAPAPLQRSLEGVRIGVARDASFAFLYQANLDLLRELGAELAFFSPLQDQA LPAVDSLYLPGGYPELHLGRLQGNRAMAEAIRAHHAAGKPLLAECGGMLYLLDCLEDA DGERGELLGLLPGRARLQKRLTALALQEVELPEGRLRGHTFHHSTLDCAVEPLARGVC PNGRNTAEAVFRLGRLTASYIHFYLPSNPQAAAALLAPARDAD" misc_feature 1384370..1385626 /gene="cobB" /locus_tag="PA1273" /note="cobyrinate a,c-diamide synthase; Region: PRK01077" /db_xref="CDD:234896" gene 1385670..1386326 /locus_tag="PA1274" /db_xref="GeneID:881430" CDS 1385670..1386326 /locus_tag="PA1274" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="5,6-dimethylbenzimidazole synthase" /protein_id="NP_249965.1" /db_xref="GeneID:881430" /translation="MSDSSHAFSATERAAVYRAIAERRDMRHFSGGSVAPELLARLLE AAHQAPSVGLMQPWRFIRITEPALRRAIHGLVEEERGRTAEALGERSDEFMRLKVEGV LDCAELLVAALMDDRERHVFGRRTLPQMDLASLACAIQNLWLASRAEGLGMGWVSLFD PAALGELLGLPPGSEAVAVLCLGPVAEFYPAPMLALEGWSEPRPLAELVYQNRWGERA " misc_feature 1385691..1386299 /locus_tag="PA1274" /note="nitroreductase family protein; Region: Nitro_FMN_reductase; cl00514" /db_xref="CDD:444950" misc_feature order(1385730..1385732,1385736..1385738,1385790..1385792, 1385796..1385801,1385805..1385807,1385814..1385819, 1385823..1385825,1385829..1385831,1385835..1385837, 1385841..1385858,1386069..1386071,1386075..1386080, 1386087..1386092,1386099..1386104,1386138..1386143, 1386171..1386173) /locus_tag="PA1274" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:380311" misc_feature order(1385736..1385738,1385742..1385744,1385748..1385750, 1385826..1385828,1386138..1386143) /locus_tag="PA1274" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:380311" gene 1386323..1387261 /gene="cobD" /locus_tag="PA1275" /db_xref="GeneID:881384" CDS 1386323..1387261 /gene="cobD" /locus_tag="PA1275" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis protein CobD" /protein_id="NP_249966.1" /db_xref="GeneID:881384" /translation="MSALLGILGVVLDARFGEPQGWHPLVAFGRLADRLERRFNRSRL AGEADPGVGWRSHGVTAWVLAVLPLTLLAWALAELPYLGWLVQALALYAALGLRSLGE HAEPVALALRAGDLDEARRRVGYLVSRDTRELDQAGVARAATESVLENGSDAVYAALF WFAVAGAPGVVLYRLSNTLDAMWGYRNARFERFGWAAAKIDDILNYLPARLVALTYAL LGDTRQALRCWREQAPQWDSPNAGPVMAAGAGALGVFLGGAAIYHGELHQRPLLGSGP QPQGRDIYRALALVRQGVLLWLLVLAGLWAMGWLHA" misc_feature 1386323..1387195 /gene="cobD" /locus_tag="PA1275" /note="cobalamin biosynthesis protein; Region: cobD; PRK01209" /db_xref="CDD:234919" gene 1387254..1388249 /gene="cobC" /locus_tag="PA1276" /db_xref="GeneID:881414" CDS 1387254..1388249 /gene="cobC" /locus_tag="PA1276" /EC_number="4.1.1.81" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="threonine-phosphate decarboxylase" /protein_id="NP_249967.1" /db_xref="GeneID:881414" /translation="MLEHGGRLREAARRYDIPLADWLDLSTGIAPWPFSLPAIPEQAW TRLPESDDGLEAAACLYYGAERVLPLAGSQAAIQALPRMRRGGRVGVLSPCYAEHAHA WRQAGHLVREIGEAEVEPYLDSLDVLLVVNPNNPTGRVFEPAELLAWHARLQRRGGWL LVDEAFMDCTPQSSLAACSNRPGLIVLRSFGKFFGLAGARLGFALGERPLLQALAEQL GPWTVNGPVRHVAQSALRDRQQQRQQRERLLAASQRLEELLRRHGWPPAGGSALFQRL VDPRCAALHDYLARRGILTRQFEQPASLRLGLPADEAAWARLDAALLGFKEPAHE" misc_feature 1387263..1388219 /gene="cobC" /locus_tag="PA1276" /note="L-threonine-O-3-phosphate decarboxylase; Region: L_thr_O3P_dcar; TIGR01140" /db_xref="CDD:273466" gene 1388242..1389714 /gene="cobQ" /locus_tag="PA1277" /db_xref="GeneID:881421" CDS 1388242..1389714 /gene="cobQ" /locus_tag="PA1277" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cobyric acid synthase" /protein_id="NP_249968.1" /db_xref="GeneID:881421" /translation="MSDRGRTLMVQGTTSDAGKSTLVTALCRWLARRGVAVVPFKPQN MALNSAVTADGGEIGRAQAVQAQACRLAPHTDMNPVLLKPNTDIGAQVIIHGRAVTSM DAAAYHDYKRVAMEAVLASHGRLAAAYRVVMVEGAGSPAEINLRANDIANMGFAEAVD CPVILVADIDRGGVFAHLVGTLELLSDSERERVKGFVINRFRGDIALLQPGLDWLEAR TGKPVLGVLPYVSDLHLEAEDAIDTRQAAKVGPRLKVVVPVLPRISNHTDFDPLRLHP QVELSFVGPGQALPSADLIVLPGSKSVRADLAALRERGWDEAILRHLRYGGRLLGICG GLQMLGERLHDPLGLEGAAGSSAGLGLLALETTLEADKQLRNVQGRLSLEDAPLSGYE IHAGVTRGEALARPAVVLDDGRADGARSVDGNVMGTYLHGLFESTAACSALLRWAGLR EVQAVDYQALRERDIERLADLVERHLDTGRLLALCGEPHA" misc_feature 1388251..1389696 /gene="cobQ" /locus_tag="PA1277" /note="cobyric acid synthase; Region: PRK00784" /db_xref="CDD:234838" gene 1389707..1390228 /gene="cobP" /locus_tag="PA1278" /db_xref="GeneID:881443" CDS 1389707..1390228 /gene="cobP" /locus_tag="PA1278" /EC_number="2.7.1.156" /EC_number="2.7.7.62" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase" /protein_id="NP_249969.1" /db_xref="GeneID:881443" /translation="MRDLILGGARSGKSRLAERLAAESGLAVSYIATAQAGDGEMGRR IAEHRARRPAHWRTLEEPLALAATLRSEAEAGRCLLVDCLTLWLTNLLLCDDPQRLDG EREALLECLGELPGRIILVSNETGLGVVPLGELSRRYVDEAGWLHQAIAERCERVTFT VAGLPMPLKGEPL" misc_feature 1389707..1390213 /gene="cobP" /locus_tag="PA1278" /note="adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; Validated; Region: cobU; PRK05800" /db_xref="CDD:235612" misc_feature order(1389728..1389736,1389740..1389742,1390076..1390087, 1390091..1390093,1390124..1390126,1390136..1390141, 1390145..1390150,1390157..1390159,1390190..1390192, 1390196..1390198) /gene="cobP" /locus_tag="PA1278" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:410861" misc_feature order(1389728..1389748,1389794..1389796,1389800..1389808, 1389812..1389814,1389851..1389853,1389860..1389862, 1389878..1389880,1389950..1389955) /gene="cobP" /locus_tag="PA1278" /note="GTP binding site [chemical binding]; other site" /db_xref="CDD:410861" misc_feature 1389848..1389850 /gene="cobP" /locus_tag="PA1278" /note="putative catalytic site [active]" /db_xref="CDD:410861" gene 1390225..1391280 /gene="cobU" /locus_tag="PA1279" /db_xref="GeneID:881425" CDS 1390225..1391280 /gene="cobU" /locus_tag="PA1279" /EC_number="2.4.2.21" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase" /protein_id="NP_249970.1" /db_xref="GeneID:881425" /translation="MSLQWWRDTCREADPQMRRRAAERQDRLTKPRGSLGRLEQVAID LAALQGRERPSLERIWVTVFAGDHGVVAEGISAYPQAVTGEMLRNFVRGGAAISVLAR ELGAGLEVVDLGTAFPLEALPGVRHLRLAAGTANFVEAPAMGAEECLLALEAGRESVR RAEQAGSQLFIGGEMGIGNTTAAAAMACALLDAPASALVGPGTGLDASGVAHKAAVIE RALALHGAHRADPFETLRRLGGLEIAALAGAYLACAQKGMVALVDGYICSVAALCAVR LNPACRDWLLFAHSGAEPGHRHVLEALAAQPLLDLGLRLGEGSGAALAVPLLRQACAL HAGMATFAEAAVSDRPA" misc_feature 1390231..1391274 /gene="cobU" /locus_tag="PA1279" /note="NaMN:DMB phosphoribosyltransferase [Coenzyme transport and metabolism]; Region: CobT; COG2038" /db_xref="CDD:441641" gene 1391277..1391861 /locus_tag="PA1280" /db_xref="GeneID:881419" CDS 1391277..1391861 /locus_tag="PA1280" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249971.1" /db_xref="GeneID:881419" /translation="MSLRLDLLRHGETESGGGFRGSLDDALTARGWAQMRTAVEGGRW DLLVSSPLQRCRAFAEELAQRQGIELELENDLRELHFGAWEGRSAAALMDGHSEALGR FWADPYAFTPPGGEPLSEFEARVLAAQRRLRQRHAGRRVLLVTHGGVIRLLLARARGL PREHLLQVDVGHGALFGLRAGEGDDRWHECREGE" misc_feature 1391289..1391801 /locus_tag="PA1280" /note="alpha-ribazole phosphatase; Region: ribazole_cobC; TIGR03162" /db_xref="CDD:274461" misc_feature order(1391301..1391306,1391436..1391438,1391712..1391717) /locus_tag="PA1280" /note="catalytic core [active]" /db_xref="CDD:132718" gene 1391864..1392601 /gene="cobV" /locus_tag="PA1281" /db_xref="GeneID:881439" CDS 1391864..1392601 /gene="cobV" /locus_tag="PA1281" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="adenosylcobinamide-GDP ribazoletransferase" /protein_id="NP_249972.1" /db_xref="GeneID:881439" /translation="MREALRSLLVALQFLTRLPVRLSAMPTPEQFGRAVLCYPLVGVL IGVVLYAAARSLDGTPPLLQAALLLSLWVALSGALHLDGLADMADAWVGGLGDRERTL AIMKDPRSGPVAVVVLVLVLLLKFSALAALLGQGEAGLLPLAPWLARSSLPLLFLTTP YARPGGLGQAIAEHLPARSLPWVLGVSFGLALAFGLAGLLALLVTLMLFAWLRSRFLA RLGGTTGDTAGALVELTECAVLVALAL" misc_feature 1391867..1392598 /gene="cobV" /locus_tag="PA1281" /note="cobalamin synthase; Reviewed; Region: cobS; PRK00235" /db_xref="CDD:234697" gene complement(1392564..1394069) /locus_tag="PA1282" /db_xref="GeneID:881440" CDS complement(1392564..1394069) /locus_tag="PA1282" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_249973.1" /db_xref="GeneID:881440" /translation="MFRQNRWLVLAIVSSALFLIIIDMTVLYTALPRLTHDLGATAAE KLWIVNAYPLVVAGLLPGAGLLSDRLGHKRLFLAGLPLFGLASLCAAFAPSAAALIAA RAGLAVGAAVMMPATLSIVRHVFQDERERALAIGIWASVASAGAALGPVVGGVLLEFF WWGSVFLINVPVVVVALLLALPAIPACGGQSRRPWDALGSLQVMFGLVGVVYAIKELS TRAPDFGLAVLAALGGMLCLYLFVRRQRRAREPMIDFALFRNRRFARGVAVALVATMA LLGMELVFSQHLQLVQGLTPLKAGLFVLPIPLASLVVGPLAGWLVPRWGENRVMCASL LFGSAGLLGLALSYQSATGAQLASLVLLGVGFGGAMTAASTAVMLNVDEQSSGMAAAI EDVSYELGGVIGVTLLGSLMSFVYGMSLRLPSAELPARVRDSLDDALLVAEGLAPEVA SRLVELARQAFDQAFVAVLLAAAALLFLSAMAVLRQPRPATEPAPPAPHTR" misc_feature complement(1392681..1394069) /locus_tag="PA1282" /note="SmvA family efflux MFS transporter; Region: PRK14995" /db_xref="CDD:184957" protein_bind complement(1392995..1393007) /locus_tag="PA1282" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(1393013..1393025) /locus_tag="PA1282" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1394188..1394748 /locus_tag="PA1283" /db_xref="GeneID:881458" CDS 1394188..1394748 /locus_tag="PA1283" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249974.1" /db_xref="GeneID:881458" /translation="MGRRRTIDRDQLLDAAEAVIAREGAAGLTIDAVAKEMGITKGGV QYCFGTKDALIDAIFERWGKAYDSLFEAVAGKQPTPLTRVRAHAEATQRSDELSSSKA AALMAALIQTPEHLEGSNQWYRSRLEGLDLSAPEGRRARLAFLAVEGAFMLRYFRLMD IGQDEWDSMLDDVRALLLTAAGASGD" misc_feature 1394194..1394577 /locus_tag="PA1283" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene complement(1394779..1396599) /locus_tag="PA1284" /db_xref="GeneID:881436" CDS complement(1394779..1396599) /locus_tag="PA1284" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_249975.1" /db_xref="GeneID:881436" /translation="MPVYKAPLRDTRFLLNEVFDFPEHYRNLVNGAEATPDMVDAILG ECAKLCEEVIAPLYHSGDEEGCHLENGEVRTPKGYKEAYEAYVAGGWQGLSHPVEYGG QGLPMSLGALKQEMMGTANWPFSMYPGLSLGAMNTLMQHGTEEQKQTYLAPLTEGRWG GTMCLTEPQCGTDLGQVKTRAEANPDGSYAISGTKIFISSGEHDLTENIVHIVLARLP DAPKGTRGISLFIVPKFLPGEGGALGPRNGVSCGALEKKMGIKASATCVMNFDGATGF LIGPPNKGLECMFTFMNSARIGTAIQGVATAELAYQGALAYARERRSMRALSGTKEPD QVADSLMHHGDVRRMLLTQKAIAEGGRALVYLATQYADRMIQGILSNDDAEYERWDDK LGFLTPILKGCLTELGLESANLGMQVFGGHGYIREHGMEQIVRDARIATLYEGTTGIQ ALDLLGRKVLLMTQGKAVRDFTRGVARFAVDLLKNEPRMRGRALVLLKLCAQWNLLTL RIALTARKQRDLVSTASHDYLMFSGYATLAYSWALQEAAARRRLRQGGSESADFYKAK IATSEFYFARLLPRAKGHAAAMAKPTGSIMDLKSEHFAFD" misc_feature complement(1394782..1396590) /locus_tag="PA1284" /note="acyl-CoA dehydrogenase; Provisional; Region: PTZ00456" /db_xref="CDD:185635" gene 1396731..1397180 /locus_tag="PA1285" /db_xref="GeneID:881451" CDS 1396731..1397180 /locus_tag="PA1285" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249976.1" /db_xref="GeneID:881451" /translation="MTDERYGYIHASMLPTQCLCTKLRRAARSVSRFYDEALADTGLK VAQFSLLRHLRRLDRPSISELAEAMGLDRSTLGRNLRVLEGDGLLRLTGGEDQRNRLV ELTPAGLDALERGTPAWEDAQRRLAGRLGEERSGALAALLAELERLD" misc_feature 1396773..1397129 /locus_tag="PA1285" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" gene 1397254..1398453 /locus_tag="PA1286" /db_xref="GeneID:881763" CDS 1397254..1398453 /locus_tag="PA1286" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_249977.1" /db_xref="GeneID:881763" /translation="MPRAAFWILLSGALILALSLGVRHGFGLFLAPMSADFGWGREVF AFAIALQNLVWGLAQPFTGALADRYGAARAVLVGGLLYALGLVLMGLSQSASGLSLSA GLLIGLGLSGTSFSVILGAVGRAVPAEQRSMAMGISSAAGSFGQFAMLPGTLGLIGWL GWSSALLALGLLVALIVPLAGLMKDRPLPPQGHEQSLGEALREACAHSGFWLLALGFF VCGFQVVFIGVHLPAYLVDQHLPAQVGTTVLALVGLFNVFGTYIAGWLGGRWSKPRLL TALYLVRGVVIVLFLWLPLSVYSAYAFGVAMGLLWLSTVPLTNGTVATLFGVRNLSML GGIVFLFHQLGAFLGGWLGGVVYDRTGSYDLVWQLSILLSLLAALLNWPVRERPVARL QVAGGAA" misc_feature 1397266..1398405 /locus_tag="PA1286" /note="MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; Region: MFS_YcxA_like; cd17355" /db_xref="CDD:340913" misc_feature order(1397299..1397304,1397311..1397316,1397323..1397325, 1397428..1397430,1397569..1397574,1397578..1397586, 1397593..1397595,1397668..1397670,1397677..1397682, 1397689..1397691,1397893..1397895,1397902..1397907, 1397914..1397922,1397929..1397931,1398019..1398021, 1398031..1398033,1398181..1398186,1398196..1398198, 1398208..1398210,1398256..1398258,1398265..1398270, 1398277..1398282,1398289..1398291) /locus_tag="PA1286" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340913" gene 1398618..1399172 /locus_tag="PA1287" /db_xref="GeneID:881478" CDS 1398618..1399172 /locus_tag="PA1287" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutathione peroxidase" /protein_id="NP_249978.1" /db_xref="GeneID:881478" /translation="MKPRVLLSVLALAGLPLSGWAADCPELLQGQLTKLRSKESIDLC QRYAGKPLVVVNTASHCGFTPQFKGLEALYQRYKGQGLEVLGVPSDDFKQEAADTAET AKICYGNYGVTFAMTQPQHVRGDEAIPLFRQLAEQSGQAPRWNFYKYVVDRQGRVVAQ FSSKTTPDDPQLQAAIEKAIASQP" misc_feature 1398687..1399157 /locus_tag="PA1287" /note="Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid transport and metabolism]; Region: BtuE; COG0386" /db_xref="CDD:440155" gene complement(1399231..1400505) /locus_tag="PA1288" /db_xref="GeneID:881473" CDS complement(1399231..1400505) /locus_tag="PA1288" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249979.1" /db_xref="GeneID:881473" /translation="MKTIWFKTSLALTISAVSTYTLANGIAINEQSASGAGTAYAGRA SSALDASTIYGNPAGLSKLKRTEVSGGLAIVKAKDDISQAHSTAQGSNKGDSVPLAAV PFGYFSTPINEDFTFGLGIYVPYGIINDYENGFMGSSHGSYSKVQVITVQPTIAWKIN DKVSVGFGPTFNRIDGQLKNTLATNGLLGSNGDTKINIKGDDTAIGYNVGVMVDLTDD TTWGLTYHSKVKYHLGGNTEVKNAPGALGLNGKYDAKLDITLPESVDTSITHKFDDKW TGYLGAVWTRWSRLEKIEVRNSGVPALGQALGFNTIGEDLNWRDTWSFSVGTSYQATP EWVLRTGFAYEPSPTSNEDRNVRIPVGDRKVFTVGAGWSPNQDLTVDVAYAYLWETTA GVNQEGSALQPAYSAKYDNSAHGLTAQVTYRF" misc_feature complement(1399234..1400433) /locus_tag="PA1288" /note="Outer membrane protein transport protein (OMPP1/FadL/TodX); Region: Toluene_X; pfam03349" /db_xref="CDD:427255" gene complement(1400711..1401190) /locus_tag="PA1289" /db_xref="GeneID:881466" CDS complement(1400711..1401190) /locus_tag="PA1289" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249980.1" /db_xref="GeneID:881466" /translation="MGISANDLCQHVIRPTLDYLSCHSPAAEALLLGAAACQSALGSA LDDRRGHGLYRIASERHQQLWDQYLALDPERASRVRGLASQHAFLAAPHLELTVNLRY STAIAWSLVEAARLPLPDQHDHLAQARVWRQVFQPHGRLHEFIDAWQRCIGSLSQVA" gene complement(1401412..1402005) /locus_tag="PA1290" /db_xref="GeneID:881462" CDS complement(1401412..1402005) /locus_tag="PA1290" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_249981.1" /db_xref="GeneID:881462" /translation="MNVKSRQQENAEATREALLESALSAFIEHGYGGVSIDAIAREAR VTKGAFYHHFGSKQELLAECYERQVRTIAEDLDRVPAHVDKWAEAAALAEAFIDSVMA RGKRQLSLQEVITVVGWERWKRIDSRHTLRYVGRLVDELAASGELKDYRRETLVGQLY GFLTQAAMSLRDARNKRQAANEVKAIIRDFLYSLRRG" misc_feature complement(1401418..1402005) /locus_tag="PA1290" /note="tetracyline resistance-associated transcriptional repressor TetC; Region: Tn10_TetC; NF000040" /db_xref="CDD:439388" gene 1402117..1402956 /locus_tag="PA1291" /db_xref="GeneID:881492" CDS 1402117..1402956 /locus_tag="PA1291" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249982.1" /db_xref="GeneID:881492" /translation="MSTAVEIACRDGVRLAGDHFPAVGDAQGSIVVACALGVRRAFYQ RFAVLAAASGYEVLLFSYRGSEGDDPAVASYRLADWGREDIDAVLAWCRARAPELPRY FVGHSIGAQLLGLAGQASGLSGAAFVAGSFPYWRRWRGRQRWQMFGLFCVAVPLLTGL LRRFPSRFFGLGSLDMPSHFMRDWARWVRQPDYLLAPRFGLQRQGYEALDIPVASFLF EDDDYVPWAAAEKLHLVYAAAHLELRRKGRAEGAVGHFGLFRNEALQKELLDYFRKLP DAA" misc_feature 1402117..1402944 /locus_tag="PA1291" /note="Predicted alpha/beta hydrolase [General function prediction only]; Region: COG4757" /db_xref="CDD:443790" gene complement(1402981..1403835) /locus_tag="PA1292" /db_xref="GeneID:881495" CDS complement(1402981..1403835) /locus_tag="PA1292" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="3-mercaptopyruvate sulfurtransferase" /protein_id="NP_249983.1" /db_xref="GeneID:881495" /translation="MSSAQLLTAQQLAARLSEPDLLVLDCRFALEDPSYGARVYQENH IPGAHFADLERDLSAPVRKGVTGRHPLPDPAELALKLQAWGLRQDSQVVLYDDGPGAF AARAWWLLHWLGKRDGVYLLDGGLAAWKAAGLALTNGESSLRPGDFQGQPDASLLIDA ATLQAQLGQPGLALLDARAQPRFRGEVEPIDPVAGHIPGAQCAAFTDNLGSDGRFLPP EQLHQRFSALLRGRPVDELVAYCGSGVTACHNLFALSLAGFPLPRLYAGSWSEWITDP RRPVATGD" misc_feature complement(1402993..1403802) /locus_tag="PA1292" /note="3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains [Inorganic ion transport and metabolism]; Region: SseA; COG2897" /db_xref="CDD:442142" gene complement(1404136..1405197) /locus_tag="PA1293" /db_xref="GeneID:881470" CDS complement(1404136..1405197) /locus_tag="PA1293" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249984.1" /db_xref="GeneID:881470" /translation="MKKLSGIIVLLLAGAALYLALKTSPIDPLAWDAPAAPQMTGVLE PNDTLMKAELLGQGQLHGPEDTAVDSQGRVYAGLADGRVVRLDASGKVETFVDTGGRP LGMDFDAAGNLILADAWKGLLRIDPQGKVETLATEADSVPFAFTDDLDIASDGRIYFS DASSKFHQPDYILDLLEARPHGRLLRYDPSTGKTEVLLKDLYFANGVALSANEDFVLV NETYRYRITRYWLKGEKAGQHEVFIDNLPGLPDNLQGDRKGTFWVALPTPRKADADFL HRHPWLKAQLAKLPRMFLPKPTAYGLVIAIDEQGRIVRSLHDTSGHHLRMITSAKPVG DQLYFGSLENDRIGRLAIP" misc_feature complement(<1404400..1405038) /locus_tag="PA1293" /note="Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]; Region: YvrE; COG3386" /db_xref="CDD:442613" gene 1405338..1406462 /gene="rnd" /locus_tag="PA1294" /db_xref="GeneID:881579" CDS 1405338..1406462 /gene="rnd" /locus_tag="PA1294" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribonuclease D" /protein_id="NP_249985.1" /db_xref="GeneID:881579" /translation="MTAPEIQWIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAA GLVQVGDGRQEWLIDPLLIQDWSPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVP LFDTQLAAAYLGMAHSMGYSKLVKEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQ HLAQVYLALDTRLSEEKRAWLLEDGAELVANLCRESDPREAYREVKLGWRLRPQQLAV LRELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDLAAIEDMHPRTVRQDGD FLIELIAQAARLPQSEWPEALPEPLPPEVTPLLKSLRAIGQREAETLGMAPELMLRKK VLEALLKSGYPDGPYELPDSLRGWRRERMGQALLDALESA" misc_feature 1405359..1406459 /gene="rnd" /locus_tag="PA1294" /note="ribonuclease D; Region: rnd; TIGR01388" /db_xref="CDD:130455" gene 1406459..1406752 /locus_tag="PA1295" /db_xref="GeneID:881558" CDS 1406459..1406752 /locus_tag="PA1295" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249986.1" /db_xref="GeneID:881558" /translation="MKRICSVYKSPRKSEMYLYVDKREALSRVPEALLVPFGAPQHVF DLLLTPERQLAREDVAKVLENIEKQGFHLQMPPGEEEYIEHLPEELLRMNDPL" misc_feature 1406468..1406719 /locus_tag="PA1295" /note="Uncharacterized conserved protein YcgL, UPF0745 family [Function unknown]; Region: YcgL; COG3100" /db_xref="CDD:442334" gene 1407007..1407939 /locus_tag="PA1296" /db_xref="GeneID:881526" CDS 1407007..1407939 /locus_tag="PA1296" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="2-hydroxyacid dehydrogenase" /protein_id="NP_249987.1" /db_xref="GeneID:881526" /translation="MRLLILERDHALYAALLMAADPSLKVVAGDDPLQLIDAASECSI WLGQPDLVAQMLRQGVHPVWVQSTWAGITPLLAADLPKDYSLTRAVGIFGQVMSEYLL TYMLAHERQFLGRLASQVGSQWDSRTPGGLRGRQVVIVGTGEIGQAVAHTLSGFGMDL TGVAKNPRSLVPFNRMGSLDDLGRLVETADYLINLLPDTPDTHDIYDRALFARLKPTA LFINAGRGVAVVDADLVAALENNQLAGAVIDVCREEPLPANHLFWHTPRLLLTGHTAA PTLPGAMVELFRDNLARFWAGTAMRGEVDFARGY" misc_feature 1407007..1407936 /locus_tag="PA1296" /note="Putative D-isomer specific 2-hydroxyacid dehydrogenase; Region: 2-Hacid_dh_1; cd05300" /db_xref="CDD:240625" misc_feature order(1407214..1407216,1407283..1407285,1407295..1407297, 1407427..1407441,1407493..1407501,1407589..1407597, 1407610..1407612,1407673..1407681,1407751..1407756, 1407823..1407825,1407829..1407834) /locus_tag="PA1296" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:240625" misc_feature order(1407214..1407216,1407283..1407285,1407439..1407441, 1407673..1407678,1407823..1407825,1407832..1407834) /locus_tag="PA1296" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:240625" gene complement(1407951..1408931) /locus_tag="PA1297" /db_xref="GeneID:881510" CDS complement(1407951..1408931) /locus_tag="PA1297" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="metal transporter" /protein_id="NP_249988.1" /db_xref="GeneID:881510" /translation="MPGTPTTQPLRHSHRFDQGNPLAERNTRWAVLLTACMMVAEIAG GWLFNSMALLADGWHMSSHALALGLAVLAYGAARRYANDPRFSFGTWKIEVLGSYTSA LLLLLVAGLMLYQSVERLLDPSPIHYQQAMLVAALGLLVNLACAWLLRDGHAHHGHGH SHHHHHHHHHHHHHHDHHAHRHDLNLRAAYLHVLADAATSLLAIVALAGGLLWNAAWL DPLMGIVGAVLVSVWACGLIRQSSRVLLDAQMDAPVAAEIRAAIASSPLPAELLDLHL WQVGQGKYACLLSLLTTEEGSADYFKRRLAEHEELVHITVEVNPLLPLAA" misc_feature complement(1407975..1408901) /locus_tag="PA1297" /note="CDF family Co(II)/Ni(II) efflux transporter DmeF; Region: CDF_efflux_DmeF; NF033827" /db_xref="CDD:468196" gene 1408999..1409274 /locus_tag="PA1298" /db_xref="GeneID:881520" CDS 1408999..1409274 /locus_tag="PA1298" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249989.1" /db_xref="GeneID:881520" /translation="MAHTIHGKKKLLARVRRIAGQTRALEQALEEGSECAAVLQQIAA IRGAVNGLMNEVLEGHIREHLGAEQASAEQRREDLELVVTALRSYLK" misc_feature 1409005..1409268 /locus_tag="PA1298" /note="Transcriptional regulators RcnR and FrmR, and related domains; this domain family was previously known as part of DUF156; Region: RcnR-FrmR-like_DUF156; cd10153" /db_xref="CDD:197388" misc_feature order(1409005..1409007,1409101..1409103,1409176..1409178, 1409188..1409190) /locus_tag="PA1298" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:197388" misc_feature order(1409020..1409022,1409029..1409034,1409041..1409046, 1409053..1409055,1409062..1409067,1409071..1409076, 1409083..1409094,1409098..1409106,1409110..1409118, 1409122..1409127,1409131..1409136,1409143..1409148, 1409155..1409160,1409164..1409172,1409176..1409184, 1409191..1409193,1409221..1409226,1409230..1409259) /locus_tag="PA1298" /note="putative homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:197388" misc_feature order(1409020..1409022,1409029..1409034,1409041..1409046, 1409053..1409055,1409062..1409067,1409071..1409076, 1409083..1409094,1409098..1409106,1409110..1409118, 1409122..1409127,1409131..1409136,1409143..1409148, 1409155..1409157,1409164..1409166,1409176..1409178, 1409239..1409241,1409248..1409259) /locus_tag="PA1298" /note="putative homodimer interface [polypeptide binding]; other site" /db_xref="CDD:197388" misc_feature order(1409158..1409160,1409167..1409172,1409179..1409184, 1409188..1409193,1409221..1409226,1409230..1409238, 1409242..1409247) /locus_tag="PA1298" /note="putative homodimer-homodimer interface [polypeptide binding]; other site" /db_xref="CDD:197388" misc_feature order(1409176..1409178,1409239..1409241) /locus_tag="PA1298" /note="putative allosteric switch controlling residues; other site" /db_xref="CDD:197388" gene 1409351..1409800 /locus_tag="PA1299" /db_xref="GeneID:881499" CDS 1409351..1409800 /locus_tag="PA1299" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249990.1" /db_xref="GeneID:881499" /translation="MAAKVEPFWKRKTLAQLDQDEWESLCDGCGLCCLQKLEDEDDGS VYYTRIACKLLDLQSCRCTNYAERIRFVPDCIQLTPAQADEFQWLPPTCGYRLVAEGK DLPLWHHLVCGDPERVHKERISQSGRMLSETQVAEDDWEDYLIFRAG" misc_feature 1409366..1409785 /locus_tag="PA1299" /note="Uncharacterized cysteine cluster protein YcgN, CxxCxxCC family [General function prediction only]; Region: YcgN; COG2983" /db_xref="CDD:442222" gene 1409949..1410476 /locus_tag="PA1300" /db_xref="GeneID:881504" CDS 1409949..1410476 /locus_tag="PA1300" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ECF subfamily sigma-70 factor" /protein_id="NP_249991.1" /db_xref="GeneID:881504" /translation="MDERFRGSVSHAYQAFHGELLRFLRKHLGSSADAADLAQDTFAQ WLKWPGRQSVEQPRAFLFQIARNLLRDHWRRQQSRGQDLDRPAANDEPAALEGEAAGP GERFEQQQRLSHLAAALAELPPRRREAFVLHKFDGLSQVEVAERMGISLSMVEKHIAS ALLHCKRRLGQGGEG" misc_feature 1409985..1410470 /locus_tag="PA1300" /note="DNA-directed RNA polymerase specialized sigma subunit, sigma24 family [Transcription]; Region: RpoE; COG1595" /db_xref="CDD:441203" gene 1410473..1411456 /locus_tag="PA1301" /db_xref="GeneID:881570" CDS 1410473..1411456 /locus_tag="PA1301" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transmembrane sensor" /protein_id="NP_249992.1" /db_xref="GeneID:881570" /translation="MKPLERLEPLFADETEEDIDHRAAYWFSRRRSGHFSAACRAELE DWLRADPRHREALEGMERLWREFDGLPRPALDDIPEPVPAWRLPRALAAAFFVFCALL VATLFWRDQSLGPNLAYGTAPGEQREVVLADGSKLFLDVDTQVQVRYAERTRDVLLKK GEVFFVVSHDPARPFRVGSGDSRVTVLGTQFSVRRNAQALAVAVKQGRVALQPSLEKD AEHVLLAGDSARLDLAEQRLELGHVAPEQVASWRDGQLVFRDKPLGELVEELSRYRAA PIRLGDPRLAGKRVSGTVRIARPDDFLLALPALLPVRVQPQAGGEVLILAR" misc_feature 1410539..1410661 /locus_tag="PA1301" /note="Domain of unknown function (DUF4880); Region: DUF4880; pfam16220" /db_xref="CDD:435227" misc_feature 1410671..1411378 /locus_tag="PA1301" /note="Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport [Inorganic ion transport and metabolism, Signal transduction mechanisms]; Region: FecR; COG3712" /db_xref="CDD:442926" gene 1411585..1414140 /locus_tag="PA1302" /db_xref="GeneID:881567" CDS 1411585..1414140 /locus_tag="PA1302" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="heme utilization protein" /protein_id="NP_249993.1" /db_xref="GeneID:881567" /translation="MTLPFTRAAWRPLCSAAVLGAALWAAGASAAERRFDLPAQPLAA SLSRLAQQAQVQVLFDESLLRGLRAPALSGSYGVREALERLLVGSELELVEAGGGYVV RRRQVDAYSDNALQLDAQTIVGNGREVDASNVGRSTLTRRDIERQQADNIPSLLQTLP GVTMGGSPKPGGQTTNIWGLGDAEDVPYTLDGAQKSGFERYQQGTVFIEPEMIKRIEV EKGPHSVFTGNGGFGGTVHMETKDAPDLLREGRDVGAMLKYGYHSNDQQKIYSGAVFG RSEDRRVDALLYLNGRDGRDMKLADNLPLSPTDYPINPKRLPNSAQDEKTGLFKLNLH PTEEHDLGFTYLRSKSSRWTPFSASSYPTPPSQWTIDRYGYELGLTRLLAHRDTTDTT WTGKYNYHPLDNPWIDLQLSYSDARTEQLDRREDTAFYQLATGGKRMRTEYQDKVLEL RNTSRFDTGALQHELTLGAALHKHKRDILMHMPGKTYETPRYNYGWLQPAFMPAGKQD TQSFYIQDAITYGSLTVTPSMRFDSVRNDGQANLAPIYDNPKLGHDYRAQTYSGWSPR LSVFWTATPNLAFFADYTETWRAPVIDEQYEVQNSSTIGGSSRDLDAERIHAIRGGSV INLPDLLVAGDSLQIRTTLFQNRIKDEIFRTRSVGCRQQSIDNGSIGGSCGDMLPLSN YRNLPGLTIKGFEIESFYDSQRLFGSLSYSWMTGKHDGAYSNPWGPNVWARDIPPPKW VAMLGLKVPEWDAKLGWQGEFVRKTDRLPSDRYSGGMGTGSGDIYWDHAANDSYDTHR LFAEWVPAKLGLKDTRIDFTVDNLFNRSYRQPLGGDLVYSQGRNAKISVTQFF" misc_feature 1411747..1411899 /locus_tag="PA1302" /note="Secretin and TonB N terminus short domain; Region: STN; smart00965" /db_xref="CDD:198033" misc_feature 1411933..1414134 /locus_tag="PA1302" /note="TonB-dependent heme/hemoglobin receptor family protein; Region: TonB-hemin; TIGR01785" /db_xref="CDD:273807" gene complement(1414147..1414686) /locus_tag="PA1303" /db_xref="GeneID:881561" CDS complement(1414147..1414686) /locus_tag="PA1303" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="signal peptidase" /protein_id="NP_249994.1" /db_xref="GeneID:881561" /translation="MGLLAAIMLAVYLANPFGTASLDPRARLLGVALYKIPSRSMEPT LQQGDFILANAARYAFADPQVGDLVVFRFPPQRSIAYVKRIAGIPGDRVRIDGGRLYV NERPVTEPYLAQQALRQPESLRMAERTVPAGQYFMLGDNRDNSNDSRYWGYVPRADLV GRVFAVWYAEDTRRIGSVR" misc_feature complement(1414174..1414593) /locus_tag="PA1303" /note="signal peptidase I, bacterial type; Region: sigpep_I_bact; TIGR02227" /db_xref="CDD:274044" gene complement(1414763..1416814) /locus_tag="PA1304" /db_xref="GeneID:881476" CDS complement(1414763..1416814) /locus_tag="PA1304" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oligopeptidase" /protein_id="NP_249995.1" /db_xref="GeneID:881476" /translation="MPHPQPPIARRDAGSDPYAWLEERDAPEVLDYLKAENAYLDSEL ADQAGLRETLFEEIRGRIRETDLSLPSPWGPWLYYQRTTAGDEYPRHYRCPRPADGSL AVDEGAEQLLLDPNQLADGGFLSLGAFSISPDQSLLAYSLDTSGDEIYRLFVKDLASG AVQALPFDDCDGSLTWANDNRTLFFGELDDTHRPHKLYRHRLGEAGAELVFEEGDGRF FLHCYRSSSERQLILLLNSKTTSEAWVLDADQPQGTFRCLAPREEGHEYYPDHGRLDG RGLWLIRSNQAGINFALYQAEESRPTREHWQLRVAHDPQRTLEDVSLNAEAVILGLRD GGLPVIEVQPQGLPAYRVQLPDAAYSLYVQDSLEFDSPCVRLRYEALNRPAQVRQLNL ADGTQTVLKQTPVEGPFDADAYASRRIWASSGDGTQVPVSLVARKEVLDGIAAGRPAP LYLYGYGAYGHSLDPWFSHARLSLLERGFVFAIAHVRGGGELGEAWYRAGKLEHKQNS FDDFIACAEHLLAEGYCRPEGLAISGGSAGGLLIGAVLNQRPQLFGAAIAEVPFVDVL NSMLNPDLPLTVTEYDEWGNPQEPEVHARIAAYAPYENVRAQDYPHLLVVAGYNDSRV QYWEAAKWVAKLRATRTDANLLLLKTDLGAGHGGMSGRYQGLKDVALEYAFLLKVLGL V" misc_feature complement(1414769..1416814) /locus_tag="PA1304" /note="Protease II [Amino acid transport and metabolism]; Region: PtrB; COG1770" /db_xref="CDD:441376" gene 1416963..1417436 /locus_tag="PA1305" /db_xref="GeneID:881584" CDS 1416963..1417436 /locus_tag="PA1305" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249996.1" /db_xref="GeneID:881584" /translation="MNEQDYLIAWGAYAIAGLGLMLVFWLMTGWMWRWLREPLRLIVF ILLFTPTPVDPQNDLYAPAIAITALDVVFKVGNNAWRAVSDLALVALLGFGLYLLIAA IRWPLERAWKNRRHPSQDAEDEPTLRQMMQPELMPDVDTRTDEHGDRRMRIEPRL" gene 1417500..1417961 /locus_tag="PA1306" /db_xref="GeneID:881507" CDS 1417500..1417961 /locus_tag="PA1306" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="HIT family protein" /protein_id="NP_249997.1" /db_xref="GeneID:881507" /translation="MSGFPMDCVFCAIAGGREPAHRLFEDEHFIVLLDIFPLRPAHVL IVAREHALHLSDLSAAARDALLALAERIGRALRRAGFGVEGINLLLNDGVAANQHVAH LHLHLIPRRRGDLPRLLWRALTRFLPVGRASLQARLQRERELLRTALLREV" misc_feature 1417515..1417919 /locus_tag="PA1306" /note="Purine nucleoside phosphoramidase/Ap4A hydrolase, histidine triade (HIT) family [Nucleotide transport and metabolism, General function prediction only]; Region: HinT; COG0537" /db_xref="CDD:440303" gene 1417965..1418738 /locus_tag="PA1307" /db_xref="GeneID:881545" CDS 1417965..1418738 /locus_tag="PA1307" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249998.1" /db_xref="GeneID:881545" /translation="MCELLGMSANVPTDIVFSFTGLMQRGGGTGPHRDGWGIAFYEGR GVRLFQDPLASVDSEVARLVQRFPIKSETVIGHIRQANVGKVGLSNTHPFIRELGGRY WTFAHNGQLADFQPKPGFYRPVGETDSEAAFCDLLNRVRRAFPEPVPVEVLLPVLISA CDEYRKKGVFNALISDGDWLFTFCSSKLAYITRRAPFGPARLKDADLTVDFHAETTPD DVVTVIATEPLTDNENWTLQQSGEWVLWWGGEVLAKGRV" misc_feature 1417965..1418735 /locus_tag="PA1307" /note="Glutamine amidotransferases class-II; Region: GATase_4; pfam13230" /db_xref="CDD:433047" misc_feature order(1417968..1417970,1418199..1418201,1418286..1418294, 1418346..1418348) /locus_tag="PA1307" /note="putative active site [active]" /db_xref="CDD:238889" misc_feature order(1418103..1418105,1418112..1418117,1418250..1418252, 1418322..1418324,1418385..1418387) /locus_tag="PA1307" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:238889" gene 1418765..1419289 /locus_tag="PA1308" /db_xref="GeneID:881591" CDS 1418765..1419289 /locus_tag="PA1308" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_249999.1" /db_xref="GeneID:881591" /translation="MFRSYLRLLLFTLGLLLGVQVPGFIDDYAKRVDAHRLEAAQNIQ GFQQTAGQFFNGSLEELVRHYRSNSDPVFQRDGENLDRLMRRARMLDAEWQAMQGPWY ARAWHMLRAPNHELLMETYASYSYQVLLKPEVIAWGLGCALLVAWIAELIVYSLASLF GFGEDRRTRERHWS" misc_feature 1418816..1419247 /locus_tag="PA1308" /note="Protein of unknown function (DUF2937); Region: DUF2937; pfam11157" /db_xref="CDD:431688" gene complement(1419298..1420158) /locus_tag="PA1309" /db_xref="GeneID:881538" CDS complement(1419298..1420158) /locus_tag="PA1309" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250000.1" /db_xref="GeneID:881538" /translation="MNLFQLRAFDAVAREGSFTRAAERLCISQPAVTGHVKALEEHYQ VTLFRRTARRIELTEEGSRLVAITRTLFALEEEAEALLDANRQLVSGRLEVAADGPHL VMPMLARLRASYPGITVNLRLGNAQETLAALLSEHVDVAVLTEVEARPGLFLEELVNS RICALLPRQHPWCERNEGVPLEELDQQIMVLREPGSITRRTFDRACAEQGVQPRVLLE LDSREAVTEAVAAELGVGVVSSLEVGNDPRVRAVPLVGPELTNRHLIGCLEKRRGLRV IRAFLELAAA" misc_feature complement(1419307..1420146) /locus_tag="PA1309" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" misc_feature complement(order(1419466..1419471,1419475..1419480, 1419496..1419513,1419790..1419810,1419814..1419816, 1419826..1419828,1419835..1419840,1419844..1419849)) /locus_tag="PA1309" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene 1420326..1421441 /gene="phnW" /locus_tag="PA1310" /db_xref="GeneID:881491" CDS 1420326..1421441 /gene="phnW" /locus_tag="PA1310" /EC_number="2.6.1.37" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="2-aminoethylphosphonate--pyruvate transaminase" /protein_id="NP_250001.1" /db_xref="GeneID:881491" /translation="MSTAERAPILLTPGPLTTSYRTRRAMMVDWGSWDSDFNELTASV CQRLLKIVGGEGSHTCVPLQGSGTFAVEAAIGTLVPRDGKVLVLINGAYGKRLAKICE VLQRPFSTLETEENVPTTAADVERLLAADPAISHVALIHCETSTGILNPLEAIAKVVE RHGKRLIVDAMSSFGAIGIDARKVPFDALIAASGKCLEGVPGMGFVFARSAALEASAG NCHSLAMDLQDQHAYMRKTGQWRFTPPTHVVAALHEALSQYEEEGGLPARQRRYASNC ETLLGEMARLGFRSFLPAEIQAPIIVTFHAPRDPRYRFADFYQRVREKGFILYPGKLT QVETFRVGCIGHVDAAEMRQAVAAIGEALRELEVLEI" misc_feature 1420332..1421432 /gene="phnW" /locus_tag="PA1310" /note="2-aminoethylphosphonate--pyruvate transaminase; Provisional; Region: PRK13479" /db_xref="CDD:184076" gene 1421477..1422304 /gene="phnX" /locus_tag="PA1311" /db_xref="GeneID:881484" CDS 1421477..1422304 /gene="phnX" /locus_tag="PA1311" /EC_number="3.11.1.1" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phosphonoacetaldehyde hydrolase" /protein_id="NP_250002.1" /db_xref="GeneID:881484" /translation="MNYNQPATLQAAILDWAGTVVDFGSFAPTQIFVEAFAEFGVQVS LEEARGPMGMGKWDHIRTLCDIPAIAERYRAVFGRLPSDDDVTAIYERFMPLQIEKIA EHSALIPGALQAIAELRGMGLKIGSCSGYPAVVMEKVVALAETNGYVADHVVATDEVP NGRPWPAQALANVIALGIDDVAACVKVDDTWPGILEGRRAGMWTVALTCSGNALGLTY EQYQALPAAELERERTRIEQMFEGSRPHYLIETIAELPAVVRDINARLARGEMPQGN" misc_feature 1421492..1422292 /gene="phnX" /locus_tag="PA1311" /note="phosphonoacetaldehyde hydrolase; Provisional; Region: PRK13478" /db_xref="CDD:184075" gene complement(1422355..1423266) /locus_tag="PA1312" /db_xref="GeneID:881598" CDS complement(1422355..1423266) /locus_tag="PA1312" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250003.1" /db_xref="GeneID:881598" /translation="MVSLDRFETFRAVVDCGSLSAAADTLGQTRAVVSFNLKRLEAEL GVSLLSRSTRRMALTDAGERFYQRCVKVLDEARLAIDDARAEHGELRGSLRVTTTQEY GLRQLVPALQAFARLHPALQVQLSTSSLHADLIGERFDVAIRLGRLEDSTHHAVQLAS FEVLAVASPACLAALGEPPPTDLESLERLQNLGHSRLADSLPWQVRAPDGALRSYRGP RHPMLLADNAAALRAFALDGLGIAVLPDWLVQADLRCGALQRLLADHGFPLQGVHAVY PPTRHLPSKVRAFIDFLKTRLGHPDAG" misc_feature complement(1423078..1423257) /locus_tag="PA1312" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(1422388..1422993) /locus_tag="PA1312" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature complement(order(1422451..1422453,1422532..1422534, 1422583..1422585,1422784..1422786,1422790..1422792, 1422832..1422834,1422949..1422951,1422961..1422963)) /locus_tag="PA1312" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature complement(order(1422556..1422558,1422565..1422570, 1422589..1422603,1422697..1422699,1422886..1422906, 1422910..1422912,1422922..1422924,1422931..1422936, 1422940..1422945,1422955..1422960)) /locus_tag="PA1312" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 1423374..1424732 /locus_tag="PA1313" /db_xref="GeneID:881630" CDS 1423374..1424732 /locus_tag="PA1313" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_250004.1" /db_xref="GeneID:881630" /translation="MNQPSRLATLYLLGFALDLVNIFIASVAYPDIGRSLGASVATLA WIGNTYLLGLTLVIPLSVWLASRLGERRLMLLALAGFASASLGCGLAGSAATLIVWRL CQGLAGGLLIPLGQAMAYRNVPASARAGLTARVMLVALIVPAVAPALGGWLVDSLSWR GIFFASVAPALLVLALAMRWLPRHKHAAQRLDLRGLLLGSAALATLLVALAWLGSPGG GGRGLLLALLACVLGCCYWRDGRARTDALLDLGLLEAPLLRTAMLVYLCVPGAFMGAN LVAMLYLQGPLGLSASRAGALMLPWALAAGLAIGLTRRRFNRWGPKSLLLAGMAIQAG GLLWLARSGEGSGFWQLAGAYATMGFGGSLCSSAAQGMALLDVPAARMGHASALWNIN RQLAFCLGMAVLGGLLNLLQARADPAAFVHCFLFAAAFTLLPLPWVRRIDSAGVRALV QT" misc_feature 1423404..1424696 /locus_tag="PA1313" /note="Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_LmrB_MDR_like; cd17503" /db_xref="CDD:341046" misc_feature order(1423425..1423430,1423437..1423442,1423449..1423451, 1423545..1423547,1423695..1423700,1423704..1423712, 1423719..1423721,1423779..1423781,1423788..1423793, 1423800..1423802,1424166..1424168,1424175..1424180, 1424187..1424195,1424202..1424204,1424286..1424288, 1424298..1424300,1424454..1424459,1424469..1424471, 1424481..1424483,1424529..1424531,1424538..1424543, 1424550..1424555,1424562..1424564) /locus_tag="PA1313" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341046" gene 1424746..1425132 /locus_tag="PA1314" /db_xref="GeneID:881529" CDS 1424746..1425132 /locus_tag="PA1314" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250005.1" /db_xref="GeneID:881529" /translation="MTCAYRREIHHAHVAIRDWLAGDSRADALDALMARFAEDFSMVT PHGVVLDKTALGELFRSKGGTRPGLRIEIDGESLLASGVDGATLAYREIQSDAAGRSE RLSTVVLHRDDEGRLYWRHLQETFCG" misc_feature 1424749..1425129 /locus_tag="PA1314" /note="Uncharacterized conserved protein, DUF4440 domain [Function unknown]; Region: COG4460" /db_xref="CDD:443558" gene complement(1425140..1425754) /locus_tag="PA1315" /db_xref="GeneID:881612" CDS complement(1425140..1425754) /locus_tag="PA1315" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250006.1" /db_xref="GeneID:881612" /translation="MPDRHAEQPARQPRTKPAEVRLEELMAAAQQLFLDKGVDATTIS DIVAAAGVAKGTFYHYFQAKTDILLALRERFTQAFQQRIANAVEACPANDHPGRLRAW TESGLAGYLEGYRLHDVVYSEHHHHQRGNQERDRVLEQLAELLENGAAAGAWPLRNPR LNALLLYSGLHGAADDAIAGGRLDTQPLAGELADAFLRLLGASD" misc_feature complement(1425239..1425712) /locus_tag="PA1315" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene 1425912..1427453 /locus_tag="PA1316" /db_xref="GeneID:881564" CDS 1425912..1427453 /locus_tag="PA1316" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_250007.1" /db_xref="GeneID:881564" /translation="MNPSRRVALVAAIYLGTFIASLDISIVNLALPTLQYALDTDLAG LQWVVDAYALCLSAFMLSSGPLSDRYGRKLTWLLGVGLFSFGSLLCALATSLPLLLFG RAVQGIAGALLIPGALSILTQAFHDPGQRAQVIGGWTSFSALSLILGPLLGGLLVEHA GWQSIFLINLPLGLLALALGLWGIEETAHPEHAAFDPLGQLLSVVWLGALTYALIAAG EGGWLSPTAWPALLLAGVGLLGFLFVERRTARPLLPLGLFRQAGFAVCNLASFVLGFS GYASLFFLSLFFQQVQGASAQQAGFYLAPQFLAMGALSMLFGRLQRHVPLRRLLVLGY LVIGLAMLALAACGTGTAYPWVGLLLVALGLGMGLAVPGTGLAVMASVARERSGMASA TMNTLRQAGMAVGIALLGALLSGRAIVVLGDRLEGLGIADAQRLATQAVTAHRLPGSL AGLDAELPAALAEGFRLAMLVAGASALLAAALLWRLRVSAGPAADTVGASGRTAGVQL QADRH" misc_feature 1425954..1427240 /locus_tag="PA1316" /note="Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_MMR_MDR_like; cd17321" /db_xref="CDD:340879" misc_feature order(1425969..1425974,1425981..1425986,1425993..1425995, 1426089..1426091,1426239..1426244,1426248..1426256, 1426263..1426265,1426326..1426328,1426335..1426340, 1426347..1426349,1426719..1426721,1426728..1426733, 1426740..1426748,1426755..1426757,1426839..1426841, 1426851..1426853,1427007..1427012,1427022..1427024, 1427034..1427036,1427082..1427084,1427091..1427096, 1427103..1427108,1427115..1427117) /locus_tag="PA1316" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340879" gene 1428080..1429075 /gene="cyoA" /locus_tag="PA1317" /db_xref="GeneID:881513" CDS 1428080..1429075 /gene="cyoA" /locus_tag="PA1317" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome o ubiquinol oxidase subunit II" /protein_id="NP_250008.1" /db_xref="GeneID:881513" /translation="MTKANPFAALKWLSLAPALLLGGCDMTLFNPKGQVGMDERTLII TATLLMLIVVIPVIVMTLAFAWKYRASNTQAEYKPDWHHSNRIEAVVWLVPCVIIAIL GWITWESTHKLDPYRPLDSEVKPVTIQAVSLDWKWLFIYPEQGIATVNEIAFPKDTPV NFQITSDSVMNSFFIPQLGSQIYSMAGMMTKLHLIANEEGVFDGISANYSGGGFSGMR FKAIATSEQGFQDWVAKVKAAPASLSIGTYPELVKPSENVPPTYFSSVSPELFGHILT KYEHHGDAKGAAHGEHAGAEHEAAMTGHDMQDMDMQAMQGMKDMKDMHMQPSTQE" misc_feature 1428107..1428997 /gene="cyoA" /locus_tag="PA1317" /note="cytochrome o ubiquinol oxidase subunit II; Provisional; Region: PRK10525" /db_xref="CDD:182518" gene 1429082..1431058 /gene="cyoB" /locus_tag="PA1318" /db_xref="GeneID:881481" CDS 1429082..1431058 /gene="cyoB" /locus_tag="PA1318" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome o ubiquinol oxidase subunit I" /protein_id="NP_250009.1" /db_xref="GeneID:881481" /translation="MFGKLTLSAVPYHEPIVMVTLAVVALLGLGVVGAITYYRKWTYL WTEWLTSVDHKKIGVMYIVVALVMLVRGFADAIMMRGQLALAEGANHGYLPPEHYDQI FTAHGVIMIIFMAMPFMTGLMNLAVPLQIGARDVAFPFLNSLSFWLLVVSAMLVNVSL GLGEFARTGWVAYPPLSELAYSPGVGVDYYIWALQISGMGTLLTGINFLVTVFKMRTP GMKLMQMPIFTWTCTFANILIVASFPILTAALGLLSLDRYLDMHFFTNELGGNAMMYI NLFWAWGHPEVYILILPAFGIFSEVTATFAGKRMFGYKSMVWASAAITFLGFTVWLHH FFTMGSGGDVNGFFGVATMLISIPTGVKLFNWLFTIYKGRLRFSTPILWTLGFMVTFT IGGMTGVLLAIPGADFLLHNSLFLIAHFHNTIIGGAVFGYLAGFAFWFPKAFGFTLDE KWGKRSFWCWLVGFYMAFMPLYILGFMGMTRRLNHYDNPLWKPYLVVAFFGAVLIFCG IACQLIQLFVSVRNRKQLADVNGDPWEGRTLEWATSSPPPFYNFAELPKVQDVDAFHD MKKAGTAYRKLPAYQPIHMPKNTAAGFSIAVFAFVFGFAAIWHIWWLMAVGFVGMIGS FIVRSYNQDVDYYVQPEEIEKIESARFQQLAKQV" misc_feature 1429085..1431022 /gene="cyoB" /locus_tag="PA1318" /note="cytochrome o ubiquinol oxidase, subunit I; Region: CyoB; TIGR02843" /db_xref="CDD:131890" misc_feature order(1429262..1429264,1429454..1429456,1429484..1429486, 1429505..1429507,1429514..1429516,1429679..1429684, 1429700..1429702,1429712..1429714) /gene="cyoB" /locus_tag="PA1318" /note="D-pathway [active]" /db_xref="CDD:238832" misc_feature order(1429292..1429294,1429304..1429306,1429313..1429318, 1429373..1429375,1429382..1429390) /gene="cyoB" /locus_tag="PA1318" /note="Putative ubiquinol binding site [chemical binding]; other site" /db_xref="CDD:238832" misc_feature order(1429397..1429399,1430342..1430344,1430354..1430356, 1430480..1430482,1430594..1430596) /gene="cyoB" /locus_tag="PA1318" /note="Low-spin heme (heme b) binding site [chemical binding]; other site" /db_xref="CDD:238832" misc_feature order(1429892..1429894,1429907..1429912,1430300..1430302, 1430312..1430317,1430522..1430524) /gene="cyoB" /locus_tag="PA1318" /note="Putative water exit pathway; other site" /db_xref="CDD:238832" misc_feature order(1429931..1429933,1430078..1430083,1430336..1430338) /gene="cyoB" /locus_tag="PA1318" /note="Binuclear center (heme o3/CuB) [ion binding]; other site" /db_xref="CDD:238832" misc_feature order(1429931..1429933,1429943..1429945,1429976..1429978, 1430078..1430083,1430156..1430158,1430165..1430167) /gene="cyoB" /locus_tag="PA1318" /note="K-pathway [active]" /db_xref="CDD:238832" misc_feature order(1430081..1430083,1430312..1430317,1430522..1430527) /gene="cyoB" /locus_tag="PA1318" /note="Putative proton exit pathway; other site" /db_xref="CDD:238832" gene 1431062..1431691 /gene="cyoC" /locus_tag="PA1319" /db_xref="GeneID:881595" CDS 1431062..1431691 /gene="cyoC" /locus_tag="PA1319" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome o ubiquinol oxidase subunit III" /protein_id="NP_250010.1" /db_xref="GeneID:881595" /translation="MSTAVLNKHLADAHEVGHDHDHAHDSGGNTVFGFWLYLMTDCVL FASVFATYAVLVHHTAGGPSGKDIFELPYVLVETAILLVSSCTYGLAMLSAHKGAKGQ AIAWLGVTFLLGAAFIGMEINEFHHLIAEGFGPSRSAFLSSFFTLVGMHGLHVSAGLL WMLVLMAQIWTRGLTAQNNTRMMCLSLFWHFLDIVWICVFTVVYLMGAL" misc_feature 1431062..1431688 /gene="cyoC" /locus_tag="PA1319" /note="Heme-copper oxidase subunit III. Heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and mitochondria which couple the reduction of molecular oxygen to water to, proton pumping across the membrane. The...; Region: Heme_Cu_Oxidase_III_like; cl00211" /db_xref="CDD:444752" misc_feature order(1431143..1431148,1431158..1431160,1431167..1431169, 1431188..1431193,1431200..1431205,1431212..1431214) /gene="cyoC" /locus_tag="PA1319" /note="Subunit I/III interface [polypeptide binding]; other site" /db_xref="CDD:239214" misc_feature order(1431164..1431166,1431188..1431190,1431299..1431301, 1431308..1431310,1431320..1431325,1431608..1431610, 1431629..1431631) /gene="cyoC" /locus_tag="PA1319" /note="Subunit III/IV interface [polypeptide binding]; other site" /db_xref="CDD:239214" gene 1431691..1432026 /gene="cyoD" /locus_tag="PA1320" /db_xref="GeneID:881604" CDS 1431691..1432026 /gene="cyoD" /locus_tag="PA1320" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome o ubiquinol oxidase subunit IV" /protein_id="NP_250011.1" /db_xref="GeneID:881604" /translation="MSSAAHDNHGAGHGSLGSYAIGFVLSVILTAIPFYMVMDGGFSR HATILTMVVLGLVQVVVHLICFLHMNMSSEGRWNVMAFIFTVIVILLVVGLSLWIIFS ADMLMMPMP" misc_feature 1431697..1432020 /gene="cyoD" /locus_tag="PA1320" /note="Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Energy production and conversion]; Region: CyoD; COG3125" /db_xref="CDD:442359" protein_bind 1432023..1432035 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1432037..1432927 /gene="cyoE" /locus_tag="PA1321" /db_xref="GeneID:881575" CDS 1432037..1432927 /gene="cyoE" /locus_tag="PA1321" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="protoheme IX farnesyltransferase" /protein_id="NP_250012.1" /db_xref="GeneID:881575" /translation="MKLKRYLLVAKPGIIFGNLIAVAGGYFLAARGSVEPMLLLATVI GLSLVVASGCVLNNCIDRDIDRHMERTRGRVTVTGQISLKAALAHGLVLGVAGFGLLW WRTNPLTTALAGFGYFVYVGLYSLWFKRRSQYGTLVGSLSGAMPPVVGYCAVSGQFDA GAASLLAIFCLWQMPHSYAIAIFRLKDYEAAGIPVLPVARGIAVTKIHIVLYILAFMA ATLALCLGGYAGYGYLLVAVAVSLWWLAIALTGYWTADDRVWARKLFAFSIVAITALS VMMSIDFQVAPATHLVASLF" misc_feature 1432037..1432903 /gene="cyoE" /locus_tag="PA1321" /note="protoheme IX farnesyltransferase; Provisional; Region: PRK04375" /db_xref="CDD:235293" protein_bind complement(1433131..1433149) /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA1321" /bound_moiety="Fur" gene 1433166..1435364 /locus_tag="PA1322" /db_xref="GeneID:881585" CDS 1433166..1435364 /locus_tag="PA1322" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="TonB-dependent receptor" /protein_id="NP_250013.1" /db_xref="GeneID:881585" /translation="MDRRNEPSPLPTKRPLAPLMLLMAACSSPALAEDAARKDDPLEL GADTVTGEQASSRVERSASAKYAVPLLDTPQTVTVVPQKVIQEQNALSLRQVLSNVSG ITFNAGEGGGGSGDSINIRGFSANANMQVDGLRDSAQTSRSDLFNLEAVEVIKGPNSV FGGAGTSGGSINMVSKQPKAEAFTHLGAGLGTDRYRRLTLDTNQPLEGLGESTAFRLN LMAHHNDVAGREQIDKQRWGIAPSLTFGLDTPTRLTLSYFHQRDDNLPDYGVPALNGR KLDGVSRHDYFGWRNLDEERIDNDVATLKLEHDFSDDFQLQNLIRYSHLHRDTVISAS HVNQKGLPPGRYLPAGPQAYGRDSKTRMWINQTNLTGRFDTFGLAHTLIGGFELSRET YDRTTYSYNLGKFYPANGFDLHNPPGYWNGPTDKRDSARNRTELEVKALYAFDTIALD ERWDLSLGLRYDWIDGTSRSTPSGKPTVRADSSDGKLSTRAGLVFKPLENGRVYFSYG TSFNPSAEHLVTTGSGVTEATGGLAPEKNSTYELGTKWEFLGRRLELDAALFQVKKED ARERLADGSYVLAGEQRVRGLELSASGKLNEHWDLFATYTYLDSETLKSSNPQREGQA LGNTPPRSLSLWSTYELPEGVTLGYGARYVSQRNVTSVDNGKLDAYWVHNMMLGYQAT RDLKLQLNLDNLFDKAYVERVRQVYGNQSRSSAIEYGDGRTAILSAIYAF" misc_feature 1433358..1435361 /locus_tag="PA1322" /note="Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; Region: Fiu; COG4774" /db_xref="CDD:443806" gene 1435493..1435825 /locus_tag="PA1323" /db_xref="GeneID:881674" CDS 1435493..1435825 /locus_tag="PA1323" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250014.1" /db_xref="GeneID:881674" /translation="MARKNAVKDNLEQIQHQSYSELQELLSEANSMLADSAAFAGDKA DSARARIGALLEKANDALGKGGSAVAERSRHAVDATESYIGANPWQTVAITTAVGLLA GFLLGRRS" misc_feature 1435493..1435819 /locus_tag="PA1323" /note="Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family [Translation, ribosomal structure and biogenesis]; Region: ElaB; COG4575" /db_xref="CDD:443632" gene 1435885..1436397 /locus_tag="PA1324" /db_xref="GeneID:881686" CDS 1435885..1436397 /locus_tag="PA1324" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250015.1" /db_xref="GeneID:881686" /translation="MLSIKKNLGLLAMTAALAACASNPNDLPDFPEHEYAATQQVGEG VINGDLYLTSASGAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDP RRATYVREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSG SQPQKVLLTR" gene 1436491..1436618 /locus_tag="PA1324.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965617" ncRNA 1436491..1436618 /ncRNA_class="other" /locus_tag="PA1324.1" /product="P9" /db_xref="GeneID:6965617" gene 1436663..1437070 /locus_tag="PA1325" /db_xref="GeneID:880911" CDS 1436663..1437070 /locus_tag="PA1325" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250016.1" /db_xref="GeneID:880911" /translation="MQHQTLQNLVGRADALINAGQFDALMDFYCDDATLVVKPGLNAC GKAQIRQAFDAIARHFEHSLRVRQHDLRVIEAGDTALVMAEAVIESKAGRLQRRATYV FRQEADGQWRCAVDNSYGTDLLASVAASAEASR" misc_feature 1436672..1437025 /locus_tag="PA1325" /note="Ketosteroid isomerase homolog YybH [General function prediction only]; Region: YybH; COG4319" /db_xref="CDD:443460" gene 1437067..1438614 /gene="ilvA2" /locus_tag="PA1326" /db_xref="GeneID:878607" CDS 1437067..1438614 /gene="ilvA2" /locus_tag="PA1326" /EC_number="4.3.1.19" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="threonine dehydratase" /protein_id="NP_250017.1" /db_xref="GeneID:878607" /translation="MSASTLSASKPLLAGYVESILAAPVYDVAVETPLQVAPQLSQRL GNRVLLKREDLQPVFSFKIRGAYTRVARLSDEQKARGVITASAGNHAQGLALAAQRLG VRAVIVMPRTTPELKVKGVLARGGEALLHGDAFPDALAHALQLAEREGMTFVPPYDDP DVIAGQGTVAMEILRQHSGRLDAIFVPVGGGSLIAGIAAYVKHLRPDIRVIGVEPEDS NCLQAALAAGERVVLGQVGLFADGVAVAQIGACNFEVCKDHVDEVITVGSDEICAAIK DIYDDTRSITEPAGALAVAGIKKYVARERTEGQTLVAIDSGANINFDRLRHVAERAEL GEQREAIIAVTVAERPGSFKAFCAALGRRQITEFNYRYHSDRQAHLFVGVQTHPLTDS RADLLAGLREQGFPVLDLTDNEMAKLHIRHMVGGHGTEVRRERLFRFEFPERPGALLN FLDKLGSRWNISLFHYRNHGAADGRVLAGLQVPDEERGELEAALQAIGYPYWEETHNP AYRLFAG" misc_feature 1437112..1438611 /gene="ilvA2" /locus_tag="PA1326" /note="threonine ammonia-lyase IlvA; Region: PRK09224" /db_xref="CDD:236417" gene 1438706..1440676 /locus_tag="PA1327" /db_xref="GeneID:879366" CDS 1438706..1440676 /locus_tag="PA1327" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="protease" /protein_id="NP_250018.1" /db_xref="GeneID:879366" /translation="MRKRNPRRATPEELRVCSVLKEKGTREELAHLAARGEWSNVPAY NASREQIADHLGKSVSPESDASFFDSRRFSEAIVLLKSRPVLLVKNGIFDEAPLAGLE QRLKKHRAALATPIRSVGRLELIDHDSMDWCGTGWRIEDDLIVTNRHVASLFAERQGS LFRFRLNQAGKQVRTRVDFREEYRQPESDEHVIARVLWIAPDVSEAPDMAILQVVKGD LLPPPLVLARQDAEPRQAVAVVGYPARDSRNDAGAMEDIFGNIYDVKRFAPGEVVGLP HDAWYLTHDCSTLGGNSGSAVLSIDGGEVVGLHFGGQFRKTNYAVKASVIRSLLARRA WVPVAGAELKRGVPRFQEKQRSVADLAERKGFDEAFLGPKAALPKPGKSHQVLPVGKG TRLDYLHFSVVMSASRRLPILTAVNIDGALKRSLKRKDSWGFDPRIEAAAQVGHKDFY GPASFDKGHMVRREDPGWGDSDAVARQAEDDTFVYTNAVPQVAQLNQRSWLSLEDYVL QNARSEGFRISVFTGPVFRDDDPLYQGVQVPLEFWKVVAMIDADSGELGVSAYLLGQE GMMPSEGFRYGAFKTYQVPLAKVEASADLRFSSALRKADVLAGTPLEEALESGRFIEI DGPDDLLLSRPGPAGKGPLRFRPAAATRVAVR" misc_feature 1439057..1439707 /locus_tag="PA1327" /note="V8-like Glu-specific endopeptidase [Posttranslational modification, protein turnover, chaperones]; Region: eMpr; COG3591" /db_xref="CDD:442810" misc_feature 1439876..1440520 /locus_tag="PA1327" /note="DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers; Region: NUC; cd00091" /db_xref="CDD:238043" misc_feature order(1440071..1440076,1440080..1440082,1440191..1440193, 1440215..1440217,1440227..1440229) /locus_tag="PA1327" /note="active site" /db_xref="CDD:238043" misc_feature order(1440071..1440076,1440227..1440229) /locus_tag="PA1327" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238043" misc_feature 1440191..1440193 /locus_tag="PA1327" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:238043" gene complement(1440639..1441547) /locus_tag="PA1328" /db_xref="GeneID:879564" CDS complement(1440639..1441547) /locus_tag="PA1328" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250019.1" /db_xref="GeneID:879564" /translation="MNRRDPLAGLHVFRQVADTGSFTRAAALLGVTPAAVSQAINQLE AELRLKLFHRTTRGVSLSEAGQRYHEQTEQPYRDLVRAREALGESLAEPSGQLRISAL HLAKNLVIAPMLNEFVRRYPKVQLEIRYEDQLVDIVRERLDAGIRLADALQPGMVGVQ LTAPLACLLVATPAYLAEYGTPASVADLDGHAAVRFRFPRSGRLHKWRLREDGRELEV DLPARFVSTDTEAIIEAARAGAGIAQAFIRERVAADLAAGRLVEVLPGSCLPLPPMWL YYLNRRHVPAKLRAFIELLREWRQPA" misc_feature complement(1441350..1441520) /locus_tag="PA1328" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(1440663..1441271) /locus_tag="PA1328" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" misc_feature complement(order(1440834..1440839,1440843..1440848, 1440864..1440881,1441158..1441178,1441182..1441184, 1441194..1441196,1441203..1441208,1441212..1441217)) /locus_tag="PA1328" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176163" gene 1441632..1442063 /locus_tag="PA1329" /db_xref="GeneID:880896" CDS 1441632..1442063 /locus_tag="PA1329" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250020.1" /db_xref="GeneID:880896" /translation="MRTPAMSTHLSLQHAQRCIAAAIAEAQRQRLAVCVAVVDAHANL LAFVRMDDSVPGAIDLAQRKARSAALFRLPSGELGRLAGPGQPLWSIEQSNGGLACFA GGMPLGDAGVSCLGGVGVSGASAAQDQSIAEAAVAMATIQR" misc_feature 1441647..1442048 /locus_tag="PA1329" /note="Heme-binding protein HbpS, GlcG/HbpS family [Signal transduction mechanisms]; Region: GlcG; COG3193" /db_xref="CDD:442426" gene 1442069..1442848 /locus_tag="PA1330" /db_xref="GeneID:879433" CDS 1442069..1442848 /locus_tag="PA1330" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_250021.1" /db_xref="GeneID:879433" /translation="MKQKRILVTGAGSGFGREVALRLAARGHRTIAGVRGAGQAADLR EEAGRRGVPLRVETLDITVAADRERAWEWDIDVLLNNAGSAEAGASAEIPLELVRALF ETNVFANLELTQGFVRRMVEQKRGGKVLFVSSIAGLITGPYTGPYCASKHALEAFAEA LHAELKPFGIQVGTINPGPYQTGFNDRMMETWKRWYDPQRHFTDHSGVRFPFEQYDPE EMIARMVELAEADEGPFRTLLPQAFVEVVKDEQAQAWQRRL" misc_feature 1442075..1442845 /locus_tag="PA1330" /note="SDR family oxidoreductase; Region: PRK09291" /db_xref="CDD:181762" gene complement(1442904..1444451) /locus_tag="PA1331" /db_xref="GeneID:882242" CDS complement(1442904..1444451) /locus_tag="PA1331" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250022.1" /db_xref="GeneID:882242" /translation="MEWIADPTAWLGLATLIVLEIVLGIDNLVFIAILADKLPPHLRD RARVLGLSLALLMRLGLLASISWMVTLTEPLFEVFGKSFSGRDLIMLFGGVFLLFKAT MELHERLEGHVAQHAGNKTYALFWPIVAQIVVLDAVFSLDAVITAVGMVEHLEVMMIA VIVSIGLMIVASKPLTRFVNRHPTVIMLCLGFLMMIGFSLTAEGLGFHIPKGYLYAAI GFSILIEVFNQVARKRRKKSLQGHRPLRARTAHAVLRLLGGQRLEADEVGEEVADLFE EGDDQVVFDRRERVMISGVLQLAEKPIRSLMTVRAEVDCIDLDSGREAIRAALLESSY SRLPLVRDGRVEEPLGYVHKKELLKELLAGAQPDLESLARQPLNLLQDCSILNALEQM REASTHVAFVVNEFGEFIGLLTLTDILESIAGELPDASEIDGPDVVEENDGYLVSGAM NLSQVRRRVGFDARATEDYQTLAGLVMSLLDRLPVIGDRLQWQDWELRVVEVEERRVT RVLLRRG" misc_feature complement(1443741..1444451) /locus_tag="PA1331" /note="Tellurite resistance membrane protein TerC [Inorganic ion transport and metabolism]; Region: TerC; COG0861" /db_xref="CDD:440622" misc_feature complement(1442967..>1443710) /locus_tag="PA1331" /note="Hemolysin-related protein, contains CBS domains, UPF0053 family [General function prediction only]; Region: TlyC; COG1253" /db_xref="CDD:440865" protein_bind complement(1444640..1444652) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1331" /bound_moiety="AmrZ" gene complement(1444720..1445271) /locus_tag="PA1332" /db_xref="GeneID:878499" CDS complement(1444720..1445271) /locus_tag="PA1332" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250023.1" /db_xref="GeneID:878499" /translation="MVGTVALAIPALAVVAARVGAEQHAARPQRFEEFAEHPRQGAAG HMEQAGVGEDAVEVPGRQSQRQEILLPYLATAVGPGHLDEARRAFESHRLVAEAAEGG QVAPGTAAEIEDPVRRRPVDMAQQRLDVLAHVMAAGALAEAFGVALVVGQGGGGDRVE ILGAHVCSQWRGSAQSSAGTGFA" gene complement(1445405..1445611) /locus_tag="PA1333" /db_xref="GeneID:879337" CDS complement(1445405..1445611) /locus_tag="PA1333" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250024.1" /db_xref="GeneID:879337" /translation="MSKSLIVSLAASLVVLTGCANPPRSVERPYSDAEIKSYALDSLE RSDLSPKRLDQYRSVLGTPHRQTL" misc_feature complement(<1445411..1445611) /locus_tag="PA1333" /note="Uncharacterized lipoprotein YehR, DUF1307 family [Function unknown]; Region: YehR; cl44134" /db_xref="CDD:479601" gene complement(1445806..1446918) /locus_tag="PA1334" /db_xref="GeneID:879340" CDS complement(1445806..1446918) /locus_tag="PA1334" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_250025.1" /db_xref="GeneID:879340" /translation="MLFSPYTLGHLTLPNRIVMPPMTRSRAASGEVATALMAEYYSQR AGAGLIVSEGTQISRQGQGYAWTPGIHSAEQVAGWRQVTDAVHAAGGRIFAQLWHVGR VSHTSLQPGNAAPVSSSALVAEGVKVFVDPQGRGAQAGGGEMVQHSAPRALAVEEIRE IVADYAQAARNALDAGFDGVELHGANGYLINQFIDSQANARNDQYGGSLENRLRFLRE VAEAVTAVVGRERIGVRLAPLTTLQGAVDDTPQATYLAAARLLDEIGVAYIHIAEADW EDAPAMPAAFKEALRIVYRGSLIYSGMYTKARAEEALARGWADLVGFGRPFIANPDLP YRLEHDLALADGDRSTYFGGGAAGYTDYPSLPQAAG" misc_feature complement(1445875..1446918) /locus_tag="PA1334" /note="Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a...; Region: OYE_like_FMN; cd02933" /db_xref="CDD:239243" misc_feature complement(order(1445941..1445949,1445953..1445955, 1446013..1446015,1446214..1446216,1446631..1446633, 1446757..1446759,1446850..1446852,1446856..1446858)) /locus_tag="PA1334" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:239243" misc_feature complement(order(1445944..1445949,1445953..1445955, 1446013..1446015,1446193..1446195,1446214..1446216, 1446355..1446357,1446361..1446363,1446370..1446372, 1446604..1446606,1446625..1446627,1446631..1446633, 1446757..1446759,1446850..1446852,1446856..1446858)) /locus_tag="PA1334" /note="active site" /db_xref="CDD:239243" misc_feature complement(order(1445944..1445946,1446355..1446357, 1446361..1446363,1446370..1446372,1446625..1446627, 1446850..1446852)) /locus_tag="PA1334" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:239243" misc_feature complement(1446355..1446357) /locus_tag="PA1334" /note="catalytic residue [active]" /db_xref="CDD:239243" gene complement(1447226..1448503) /locus_tag="PA1335" /db_xref="GeneID:879263" CDS complement(1447226..1448503) /locus_tag="PA1335" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_250026.1" /db_xref="GeneID:879263" /translation="MLGCQQALELEDIPCIGVGSAEEALQRVDRDFAGIVVSDIRLPG IDGLTLLERLKALDPSLPVVLITGHGDISMAVQAMHAGAYDFMEKPFSPERLVEVARR ALEQRGLAREVSALRRQLAGRQDLAQRIIGRSPAIQALRELIANVGDTSANVLILGET GTGKELVARCLHDYSRRHQHAFVALNCGGLPENLFDSEIFGHEAHAFTGANKRRIGKI EHANGGTLFLDEIESMPVNLQIKLLRVLQEHTLERLGSNQSIPVDCRVIAATKADLAA MGKSGQFRSDLYYRLNVVSLELPALRDRREDILLLFEHFLQQSSLRFDRPAPELDRAT VASLMAHDWPGNVRELRNVAERFALGLPVFNKGGQAVQTGGPRFAEAVEAFEKALLGD ALARHHGNLTQASQDLGMAKTTLFDKVKKYGLQ" misc_feature complement(1447235..1448491) /locus_tag="PA1335" /note="DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]; Region: AtoC; COG2204" /db_xref="CDD:441806" gene complement(1448548..1450449) /locus_tag="PA1336" /db_xref="GeneID:879303" CDS complement(1448548..1450449) /locus_tag="PA1336" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_250027.1" /db_xref="GeneID:879303" /translation="MESPDPPCSVPPSLTVKPRLVRQLLLPIPLLLLMLGFGYGGYRI SESAGIRALAENGERQLELHARTVESEISKYTYLPSLLELERSVSHLLTDPTPYRRNQ VNAYLEGLNRRAGSRAVYLLDTNGRVLATSNWSDPDSYLGEDLSFRAYWQDAMKGKPG RFYGIGSTRGEPGYYLAHGLVHGGRIIGVAVVKVKMDALEERWEKARLEAFVSDENGI IILSSNPALRLKAVRSLSADDKERLARSMQYYWWALNEWQPLQREPLAAGVEKLSFPA DEQHPRGEAVTYLAQTRALNDTPWNLTLLSPLEDLRRDAVRNGMLAAIGFALLAFLLI AWNERRKVLATRLAAREALQRANGELEVKIAERTADLQASNARLTAEIHERQQAEDTL RKAQDELVQAGKLAVIGQMSTSIAHELNQPLAALRTLSGNTVRFLQRGKLETASTNLA TINELVDRMGRITASLRAFARRSDDAGQASLAKAVDAALLILHGRLEQDPPTLHRHFD DVRLGIDQTRLEQILVNLLANALDAMSGQADRQLWLEGRREEERYVLRVRDNGPGIPP AARVHLFEPFFTTKPGEHGLGLGLTLSASLATAAGGSLSVQHPESGGTAFELSLSLVP DSPTASPAR" misc_feature complement(<1449775..1450302) /locus_tag="PA1336" /note="Cache domain; Region: dCache_1; pfam02743" /db_xref="CDD:460673" misc_feature complement(1448590..1449624) /locus_tag="PA1336" /note="Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]; Region: COG4191" /db_xref="CDD:443345" gene complement(1450545..1451633) /gene="ansB" /locus_tag="PA1337" /db_xref="GeneID:882207" CDS complement(1450545..1451633) /gene="ansB" /locus_tag="PA1337" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutaminase-asparaginase" /protein_id="NP_250028.1" /db_xref="GeneID:882207" /translation="MKPLLHAFAPGVMALMLLLPQAAQAKEVAPQQKLSNVVILATGG TIAGAGASAANSATYTAAKVPVDQLLASVPQLKDIANVRGEQVFQIASESFTNENLLE LGKTVAKLADSDDVDGIVITHGTDTLEETAYFLTLVEHTEKPIVVVGSMRPGTAMSAD GMLNLYNAVAVAGDKSARGKGVLITMNDEILSGRDASKMVNIKTEAFKSPWGPLGMVV EGKSYWFRAPVKRHTVNSEFDIKQISALAPVEIAYSYGNVSDTAYKALAQAGAKAIIH AGTGNGSVPARVVPTLQELRKQGVQIIRSSHVNAGGFVLRNAEQPDDKNDWIVAHDLN PQKARILAAVAMTKTQDSKELQRIFWEY" misc_feature complement(1450566..1451459) /gene="ansB" /locus_tag="PA1337" /note="Bacterial L-asparaginases and related enzymes; Region: L-asparaginase_like; cd00411" /db_xref="CDD:199205" misc_feature complement(order(1450617..1450619,1450626..1450631, 1450695..1450700,1450716..1450718,1450779..1450781, 1450785..1450787,1450791..1450799,1450803..1450805, 1450827..1450829,1450836..1450841,1450848..1450853, 1450857..1450859,1450869..1450877,1450881..1450889, 1451028..1451042,1451181..1451183,1451244..1451246, 1451253..1451258,1451334..1451336,1451343..1451357, 1451361..1451363)) /gene="ansB" /locus_tag="PA1337" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:199205" gene complement(1451719..1453392) /gene="ggt" /locus_tag="PA1338" /db_xref="GeneID:882262" CDS complement(1451719..1453392) /gene="ggt" /locus_tag="PA1338" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="gamma-glutamyltranspeptidase" /protein_id="NP_250029.1" /db_xref="GeneID:882262" /translation="MQPVLFRTLSLGVAIAAASSSAFAATLDGGAVAAPDEYGAKVAA QILKAGGNAVDAAVATAFTLAVTYPEAGNIGGGGFMTLYMDGKPYFLDYREVAPKAAS KTMYLDDKGEVIENLSLVGAKAAGVPGTVMGLWEAHKRFGKLPWSELLTPAIGYAQKG FKVADKQFQYRQDAVALFNGKTNFGDYFGHMKAGEAFLQPDLAKTLERIADKGPDEFY KGHTADLLVAQMQQDKGLITHQDLADYKVRWREPMRVDWQGNTLYTAPLPSSGGIALA QLLGIKENRAADFKGVELNSARYIHLLAEIEKRVFADRADYLGDPDFSKVPVARLTDP AYLKQRAAEVNPTAISPTEKVRPGLEPHQTTHFSIVDADGNAVSNTYTLNWDFGSGVV VKGAGFLLNDEMDDFSAKPGVANAFGVVGSDANAIEPGKRMLSSMSPSIVTRDGKVSL VVGTPGGSRIFTSIFQVLNNIYDFHLPLEKAVAAQRVHHQLLPKDTIYYDAYAPLAGK VAEELKAMGYTLEDQGWNMGDIQAIRVDGKALETASDPRGRGVGLVVKP" misc_feature complement(1451749..1453302) /gene="ggt" /locus_tag="PA1338" /note="Gamma-glutamyltranspeptidase [Amino acid transport and metabolism]; Region: Ggt; COG0405" /db_xref="CDD:440174" gene complement(1453470..1454204) /locus_tag="PA1339" /db_xref="GeneID:879236" /db_xref="PseudoCap:PA1339" CDS complement(1453470..1454204) /locus_tag="PA1339" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="amino acid ABC transporter ATP binding protein" /protein_id="NP_250030.1" /db_xref="GeneID:879236" /db_xref="PseudoCap:PA1339" /translation="MISIKNVSKWYGDFQVLTDCSTEVAKGEVVVVCGPSGSGKSTLI KCVNALEPFQKGDIVVDGTSIADPKTNLPKLRSRVGMVFQHFELFPHLSITENLTIAQ IKVLGRSKEEATKKGLALLERVGLKEHAHKHPGQLSGGQQQRVAIARALAMDPVVMLF DEPTSALDPEMVNEVLDVMVQLAHEGMTMMCVTHEMGFARKVANRVIFMDRGQIVEDC EKEEFFGDVSARSERAQQFLAKILPH" misc_feature complement(1453482..1454204) /locus_tag="PA1339" /note="ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; Region: GlnQ; COG1126" /db_xref="CDD:440743" gene complement(1454201..1454869) /locus_tag="PA1340" /db_xref="GeneID:882230" /db_xref="PseudoCap:PA1340" CDS complement(1454201..1454869) /locus_tag="PA1340" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="amino acid ABC transporter permease" /protein_id="NP_250031.1" /db_xref="GeneID:882230" /db_xref="PseudoCap:PA1340" /translation="MMDFSGIVPALPSLWEGMLMTLKLMVLGVLGGVALGTVLALMRL SHSKLLSNIAGFYVNYFRSIPLLLVITWFYFAVPFILRWITGEDTPVGAFTSCLVAFM MFEAAYYCEIVRAGIQAIPKGQMGAAQALGMTYGQTMRLVILPQAFRKMTPLLLQQSI ILFQDTSLVYTVGLMDFLNSARSRGDIIGQANEFLIFAGLVYFVVSFTASFAVKRLQK RLTV" misc_feature complement(1454210..1454869) /locus_tag="PA1340" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" gene complement(1454866..1455612) /locus_tag="PA1341" /db_xref="GeneID:883004" /db_xref="PseudoCap:PA1341" CDS complement(1454866..1455612) /locus_tag="PA1341" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="amino acid ABC transporter permease" /protein_id="NP_250032.1" /db_xref="GeneID:883004" /db_xref="PseudoCap:PA1341" /translation="MNYNWDWGVFFKSTGIGSETYLDWYIAGLGWTIAIALVGWIIAL ALGSLLGVMRTVPNRLVSGIATAYVEIFRNVPLLVQLFIWYFLVPDLLPEGLQTWFKQ DLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPYGQTSAARAMGFRLPQIYRHVL LPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLI YFTLNMSLMLIMRLVERKVAVPGLISVGGK" misc_feature complement(1454893..1455606) /locus_tag="PA1341" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" gene complement(1455815..1456723) /locus_tag="PA1342" /db_xref="GeneID:879321" CDS complement(1455815..1456723) /locus_tag="PA1342" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_250033.1" /db_xref="GeneID:879321" /translation="MRIAPSLLSTAIVAALLSAPVVADELTGTLKKIKETGTITLGHR DASIPFSYLGTEPGKPIGYSHDLQLKVVEAVKKELNLPELKVRYNLVTSQTRIPLVQN GTVDIECGSTTNNEERQKQVDFSVGIFEVGTRLLSKKTANIKDFDDLKGKNVVTTAGT TSERLLKAMNADKKMGMNIISAKDHGESFMMLESGRAVAFMMDDALLYGEMAKAKKPD DWVVGGTPQSFEIYGCMVRKGDAAFKKVVDKAITDTYASGEVNKIYDKWFTQPIPPKG LNLNFPMSEELKKLIASPTDKAAEQM" misc_feature complement(1455830..1456720) /locus_tag="PA1342" /note="glutamate and aspartate transporter subunit; Provisional; Region: PRK10797" /db_xref="CDD:236763" gene 1457175..1457633 /locus_tag="PA1343" /db_xref="GeneID:880995" CDS 1457175..1457633 /locus_tag="PA1343" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250034.1" /db_xref="GeneID:880995" /translation="MRYLILSLLAVLAAPAWAADDGDFWYLQTSVYTRHFNPDPEHNN HQDLLGLEYNRADGVLAGGATFRNSFSQRSNYAYLGKRFDSDSYPVYLKLTGGLLQGY RGEYRDKIPLNRFGVAPAIIPSVGVRFGPLGSELVLLGNSAAMINLGLRL" gene 1457729..1458523 /locus_tag="PA1344" /db_xref="GeneID:880999" CDS 1457729..1458523 /locus_tag="PA1344" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_250035.1" /db_xref="GeneID:880999" /translation="MQIDLSDKLAIVSGSTAGIGFAIASGLAAAGATVVVNGRSQAAV DRAIAAIRNGQPDARVRGVAGDLGTAEGCAAFVAAEPKADILVNNLGIFELKDFFDIE DAEWSRFFEVNVMSGVRLARAYVPGMVERGWGRVVFLSSESALNIPADMIHYGFSKTA NLSVSRGLAKRLAGTGVTVNAVLPGPTLTEGVAEMLREDAQKAGQSIEEAGTAFVRQH RSSSIIQRLATPEEVANLVVYTCSTQASATTGAALRVDGGVLDSLA" misc_feature 1457738..1458508 /locus_tag="PA1344" /note="NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Lipid transport and metabolism]; Region: FabG; COG1028" /db_xref="CDD:440651" gene 1458707..1460296 /locus_tag="PA1345" /db_xref="GeneID:881063" CDS 1458707..1460296 /locus_tag="PA1345" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250036.1" /db_xref="GeneID:881063" /translation="MSAASLATLDGSLRMTLVEQPRPPALADLGSRLMIVVERREDWA SYLPSEEVLTAQEYLEQSARDHGGRRVQVINLCRGYKYLGLGYYCSLLAEARGHRVIP SLRCISELARKSVYGLALGGLDKALDKALCRTPYGATDGFTLTLYFGHTEFEPLADLA RQLFEAFPCPILLVEFRRQQGWHIEGVRPGVLNRLRSDQEDVFADALDGFSRRAWRMP RSRRVARYDMAILHDPDEALPPSNPQALANFVRVGASLGIDVELIGRKDYARLAEFDA LLIRETTRVDHHTYRFAEKAEREGLVVMDDPASILRCTNKVYLADLLGCRQLGMPLTE ILYKERPQDWQRVARRLGFPLVLKIPDGCFSRGVVKVNDDSELLAAASELFERSVLLL AQEFFYTEYDWRIGVLDRQPLYACQYFMSRGHWQIYNHKADGQDVNGECRAVPLEQVP PAVLELALEAAGLIGDGLYGVDLKQAGDKVLVIEVNDNPNIDAGVEDGQLGDELYRRI LQAFVQRLELKHRGQLSKALR" misc_feature 1458869..1459324 /locus_tag="PA1345" /note="RimK-like ATPgrasp N-terminal domain; Region: RLAN; pfam14401" /db_xref="CDD:433935" misc_feature 1459382..1460254 /locus_tag="PA1345" /note="Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily [Amino acid transport and metabolism, Coenzyme transport and metabolism, Translation, ribosomal structure and biogenesis, Secondary metabolites biosynthesis, transport and catabolism]; Region: LysX; COG0189" /db_xref="CDD:439959" gene complement(1460307..1461854) /locus_tag="PA1346" /db_xref="GeneID:881103" CDS complement(1460307..1461854) /locus_tag="PA1346" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250037.1" /db_xref="GeneID:881103" /translation="MSRNNPSRHSILVTSNINAANDANRLSELCRQLEIRGYRLFQAP SRKVALDFLGNAAHPAGILLLVAEPTGENEAAQLAALDELRQVAPSIPLFLLFRQLRI EQLSSQLLDEAQGCFNLAAGPARFIAERIDSDLREWRAPAGPRRLRDYAPPVPRTPVS ARYNGRARLDLAPAKQWRIGSGSTAERLATPLNDLSTAYRKTSAGAPAAHAGDIAEAF RRALWEAAARLAREDGDTWFFEILRGNPGPGIEAGRETPAKRWHGLAETLDSSPRLDP LRVALSAPGLDSRGRPASFGVPAAVVCRYLRRHGIAPLRTGDYRFLLLFPQGARAEHA QPLVDRLCEFKRRHDDDAPLKQVLPELLDSSPLYRYIGLRELCAMIHEASLRLHLTAL ADAAARAAGHAALAPATVYGHLVRDETEAVAIDRLGGRVVASLVGVHPAATPLLLPGE RVAEESPALIDYLLALQAFGEHFPGFAPELQGIEIDERGRYRVRCVRPAALARGSGLR LATRRPD" misc_feature complement(1461462..1461782) /locus_tag="PA1346" /note="phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs); Region: REC; cl19078" /db_xref="CDD:473134" misc_feature complement(1460364..>1461215) /locus_tag="PA1346" /note="arginine decarboxylase; Provisional; Region: PRK15029" /db_xref="CDD:184989" gene complement(1461938..1462630) /locus_tag="PA1347" /db_xref="GeneID:881094" CDS complement(1461938..1462630) /locus_tag="PA1347" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250038.1" /db_xref="GeneID:881094" /translation="MTLLDIEKLLDMTHHMSVHIPIELIISWEQSEEAWSVKDNCLNF VYVNRRYTELITPRFGQKNSLLSPFSASIEEHDKLVIQTGKRIEALALLRPDDHPAPC CLYFERMPLYDRRGNRTGVIAHAKTLTSVAPRGFIATDGIGTFTFTPPSELFTSREWD VIYLLLSGLSEKEIAEQISRSLSTVKFHKSNIFQKVGCSCIGAFKALARQKKWNFYIP PTFASAKYIINH" misc_feature complement(1461992..1462441) /locus_tag="PA1347" /note="DNA-binding transcriptional regulator, CsgD family [Transcription]; Region: CsgD; COG2771" /db_xref="CDD:442052" gene 1462696..1463403 /locus_tag="PA1348" /db_xref="GeneID:881058" CDS 1462696..1463403 /locus_tag="PA1348" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250039.1" /db_xref="GeneID:881058" /translation="MPGCSLGPAEVSLASAIFFSVAFDSCVCEVLPEQLRRGAIRFQV ISATSCPGCTFDRVFLRCSNRGRARCSKSRLTADGGGQGPIEQFQEFPFSNARCHRSV LRSPGPLRGYGGSPEAYRGFVMSRVLFLLLAMVLAGLGQPTLAAPLPDELPAALPAAP PVAPLPMGSAPQPQPEAAEPDLPGSDAASADGEATTKDGLKIGNGSLRLRQDDPGPTR ESPLRDPRLNPYAPRQP" gene 1463586..1463936 /locus_tag="PA1349" /db_xref="GeneID:881044" CDS 1463586..1463936 /locus_tag="PA1349" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250040.1" /db_xref="GeneID:881044" /translation="MKYLCLIYFDEAKLAAVPAEELAAIVDECMTYSDQLGKAGHYIA SHALQSVQTATTLRHQGGRLAMTDGPFAETKEQLGGFYLIEARDLNQALQIAAKIPPG RLGCVEVRPVKEWE" misc_feature 1463586..1463933 /locus_tag="PA1349" /note="5-chloro-2-hydroxyhydroquinone dehydrochlorinase TtfG, YCII superfamily [Secondary metabolites biosynthesis, transport and catabolism]; Region: YCII; COG3795" /db_xref="CDD:443009" gene 1464111..1464860 /locus_tag="PA1350" /db_xref="GeneID:881036" CDS 1464111..1464860 /locus_tag="PA1350" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250041.1" /db_xref="GeneID:881036" /translation="MNPSLQDHPVSSREQWLDARRRLLAREKQLTRLRDQVAAERREL PWVRVDKDYRFQGERGERSLAELFGGNSQLIVYHFMFAPGWSEGCVGCSFLADHIDGA NRHLAHHDVSLVAVSRAPLEEFQAFRRRMGWRFDWYSSYGSDFNRDFGVSFDKAQLAA GSVDYNYQPTPDAGEEMPGASVFLRNPAGEVFHTYSAYARGLDILLTTYTFLDLTPKG RNEDAIMDWLRHHDRYDEAPKSACCHAQASH" misc_feature 1464126..1464821 /locus_tag="PA1350" /note="Predicted dithiol-disulfide oxidoreductase, DUF899 family [General function prediction only]; Region: COG4312" /db_xref="CDD:443453" gene 1464878..1466101 /locus_tag="PA1351" /db_xref="GeneID:881077" CDS 1464878..1466101 /locus_tag="PA1351" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ECF subfamily sigma-70 factor" /protein_id="NP_250042.1" /db_xref="GeneID:881077" /translation="MRSRIEALYREESRRVLATLIRLLGDFELAEEALHDAFIAAVEQ WPRDGIPRNPRAWLVSAGRFKAIDNLRRRARFDASQRLLAEQLEEQAEAPAEEGDAVE DDRLRLIFTCCHPALTPEAQVALTLREVCDLRTEEIARAFLAAPSAIAQRIVRAKNKI REARIPYQVPTLEELPERLGNVLQVIYLVFNEGYSASTGASLTRADLSGEAIRVGRLL VELLPDPEALGLLALMLLHDSRRQARISASGELVRLDEQDRALWDRGLIVEGLGLVER ALASRRVGPYTLQAAIVAVHAQAPRAEDTDWARIVALYDALLYLAPSPVVELNRAVAL AMRDGVEVGLAVVDALLARGELADYHLAHSARADFCRRLGRRREAREAYRAALALARQ EPERRFIEQRLRELD" misc_feature 1464878..1466098 /locus_tag="PA1351" /note="Predicted RNA polymerase sigma factor, contains C-terminal TPR domain [Transcription]; Region: COG4941" /db_xref="CDD:443968" gene complement(1466109..1467320) /locus_tag="PA1352" /db_xref="GeneID:881047" CDS complement(1466109..1467320) /locus_tag="PA1352" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250043.1" /db_xref="GeneID:881047" /translation="MPSSPSSLPSALVLLFAVACGLSVANVYYAQPLLDVLGAEFAIG QAGVGLLFGTTQAGCALALLLVVPLGDLLERRRLMFVQLLLLVLSLLLVGFAGDTLGL ALGLLGLGLLGTAMTQGLLAYAAALAAPGERGRVVGAAQGGVVIGLLLARSLAGLLAD LGGWRSVYLVSAASMGGLGLLLWRVLPAAPSNELGLTYRQLLGSMFDLLASQRVLQVR GLLGLLMFAAFGVFWSSLVLLLGAPPHSLSHSAIGAFGLVGALGALGAARAGSLADRG HAQALSGGALLLLLLSWLPLALGAHSLAALILGVLLLDLAGQAIHVLNQSLVFAIDPR AHSRLVGCYMLFYAAGSGLGASAGTAMYAWAGWDAVSLLGAAISLAALAFWWFTRGVG GEARTACANGA" misc_feature complement(1466163..1467284) /locus_tag="PA1352" /note="Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; Region: MFS_NepI_like; cd17324" /db_xref="CDD:340882" misc_feature complement(order(1466268..1466270,1466277..1466282, 1466289..1466294,1466301..1466303,1466346..1466348, 1466358..1466360,1466370..1466375,1466523..1466525, 1466535..1466537,1466619..1466621,1466628..1466636, 1466643..1466648,1466655..1466657,1466877..1466879, 1466886..1466891,1466898..1466900,1466958..1466960, 1466967..1466975,1466979..1466984,1467132..1467134, 1467228..1467230,1467237..1467242,1467249..1467254)) /locus_tag="PA1352" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340882" gene complement(1467488..1467901) /locus_tag="PA1353" /db_xref="GeneID:881092" CDS complement(1467488..1467901) /locus_tag="PA1353" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250044.1" /db_xref="GeneID:881092" /translation="MQIVPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIP ADWKDKIMHARLVVGSFALMASDNHPAYPYEGIKGCSISLNVDSKAEAERLFNALAEG GSVQMPLGPTFWAASFGMFTDRFGVAWMVNCEQDR" misc_feature complement(1467506..1467895) /locus_tag="PA1353" /note="Escherichia coli PhnB and similar proteins; Region: PhnB_like; cd06588" /db_xref="CDD:319899" misc_feature complement(order(1467512..1467514,1467542..1467544, 1467629..1467631,1467641..1467643,1467647..1467664, 1467710..1467712,1467719..1467724,1467830..1467832, 1467878..1467895)) /locus_tag="PA1353" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319899" gene complement(1467938..1468363) /locus_tag="PA1354" /db_xref="GeneID:881074" CDS complement(1467938..1468363) /locus_tag="PA1354" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250045.1" /db_xref="GeneID:881074" /translation="MRFMVIVKATQASEAGEMPSEELLAAMGRYNEELVKAGVMLAGE GLQPSAKGARVRFSGNARTVIDGPFAETRELIAGFWMFQVASLEEAIEWVKRCPNPFD GESEIEIRQVFEAEDFGEEFTPELREREERLRAELEKRN" misc_feature complement(1468013..1468363) /locus_tag="PA1354" /note="5-chloro-2-hydroxyhydroquinone dehydrochlorinase TtfG, YCII superfamily [Secondary metabolites biosynthesis, transport and catabolism]; Region: YCII; COG3795" /db_xref="CDD:443009" gene 1468510..1468890 /locus_tag="PA1355" /db_xref="GeneID:881019" CDS 1468510..1468890 /locus_tag="PA1355" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250046.1" /db_xref="GeneID:881019" /translation="MADERRCGVCRPLGGPRQPWPAGLLHCSSRAIFASLCMPRIVFA PAIQRHVAMPALDVGAATVAAALQAAFAREPRLRGYLLDDQGSLRRHVALFVDGVQVR DRRGLGDPLQDDSEIYVVQALSGG" misc_feature <1468726..1468887 /locus_tag="PA1355" /note="ubiquitin-like (Ubl) domain found in a group of small sulfide carrier proteins; Region: Ubl_MoaD_like; cd17040" /db_xref="CDD:340560" misc_feature order(1468780..1468782,1468786..1468788,1468867..1468884) /locus_tag="PA1355" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:340560" gene 1468913..1470019 /locus_tag="PA1356" /db_xref="GeneID:881013" CDS 1468913..1470019 /locus_tag="PA1356" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250047.1" /db_xref="GeneID:881013" /translation="MSERLYVGTRKGLFELRRNAAGQWLPMASHFLGEPLSMLLADPR DGALYAALNLGHFGVKLWRRDAGATDWMECAVPVYPPQPPAAEPLEGQAAEPPWSLQQ LWILEPGGADRPGTLWAGTIPGGLFRSDDRGASWRLNRELWERPERAQWFGGGYDHPG IHSICVDPRDSRHLTVAVSCGGVWQSHDDGRSWTCTTKGMRADYMPPEQSEEAAIQDP HRLVQCQARPEFLWVQHHNGIFRSRDGGLHWQGVVAEPSSFGFAVAVHPRQPDTAWFV PATKDECRIPRDARFVVTRTRDGGRSFETLERGLPDGPAYDLVYRHGLDIDPSGERLA MGSTTGGLWLSENGGEDWQQLSANLPPIYCVRFA" misc_feature 1469252..1469740 /locus_tag="PA1356" /note="Uncharacterized conserved protein related to plant photosystem II stability/assembly factor [General function prediction only]; Region: COG4447" /db_xref="CDD:443546" misc_feature 1469588..>1470016 /locus_tag="PA1356" /note="Uncharacterized conserved protein related to plant photosystem II stability/assembly factor [General function prediction only]; Region: COG4447" /db_xref="CDD:443546" gene 1470088..1470564 /locus_tag="PA1357" /db_xref="GeneID:881015" CDS 1470088..1470564 /locus_tag="PA1357" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250048.1" /db_xref="GeneID:881015" /translation="MSLESVRRFFAEKAPDLRIIELETSTATVALAAEAHGVEPGRIA KTLSLRVGERTVLVVARGDARLDNRKIKAAFGGKAKMLGAEDVVELTGHPVGGVCPFG LATPLAVYCDVSLQAFDEVLPAAGAVHSAVRIAPQRMAELVDAQWVDVCQEVLQEA" misc_feature 1470094..1470537 /locus_tag="PA1357" /note="This CD, composed mainly of bacterial single-domain proteins, includes the Thermus thermophilus (Tt) YbaK-like protein, a homolog of the trans-acting Escherichia coli YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium tumefaciens ProX Ala-tRNA(Pro)...; Region: ProX_deacylase; cd04333" /db_xref="CDD:239825" misc_feature order(1470220..1470222,1470373..1470378,1470457..1470459) /locus_tag="PA1357" /note="putative deacylase active site [active]" /db_xref="CDD:239825" gene complement(1470580..1470978) /locus_tag="PA1358" /db_xref="GeneID:881117" CDS complement(1470580..1470978) /locus_tag="PA1358" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250049.1" /db_xref="GeneID:881117" /translation="MSARVRPFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPG PEGSVLKALFRLGDQSVHCIDSHVRHAFDFTPAFSFFVDCESNAQIERLAEALSDGGK ALMPLGDYGFSQRFAWLADRFGVSWQLNLA" misc_feature complement(1470589..1470966) /locus_tag="PA1358" /note="Escherichia coli PhnB and similar proteins; Region: PhnB_like; cd06588" /db_xref="CDD:319899" misc_feature complement(order(1470595..1470597,1470625..1470627, 1470712..1470714,1470724..1470726,1470730..1470747, 1470793..1470795,1470802..1470807,1470898..1470900, 1470949..1470966)) /locus_tag="PA1358" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319899" gene complement(1471016..1471672) /locus_tag="PA1359" /db_xref="GeneID:881032" CDS complement(1471016..1471672) /locus_tag="PA1359" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250050.1" /db_xref="GeneID:881032" /translation="MEEVRQWEAARWTAGNGMCTIMRKTATVSNILPNPTERPSVLEH VSGNVRRLRLQAGLSQEALARAASVSRRMLVGIESGDVNVSLSTLDRIAAALGVLFPD LVQAPATDRSRINAVAWVGHHPESRATLLASAPARREVELWAWSLGPGERYVSEPDAA GWREIVLVIEGRLRLELADGERRIEAGDFHAFASDQPYAYVNDGDGDEVVRFTRNVVS " misc_feature complement(1471334..1471558) /locus_tag="PA1359" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" misc_feature complement(1471043..1471294) /locus_tag="PA1359" /note="XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain; Region: cupin_XRE_C; cd02209" /db_xref="CDD:380339" misc_feature complement(order(1471073..1471075,1471079..1471081, 1471181..1471183,1471193..1471195,1471202..1471204, 1471238..1471240,1471244..1471246,1471289..1471291)) /locus_tag="PA1359" /note="putative active site [active]" /db_xref="CDD:380339" gene 1471671..1472564 /locus_tag="PA1360" /db_xref="GeneID:881986" CDS 1471671..1472564 /locus_tag="PA1360" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250051.1" /db_xref="GeneID:881986" /translation="MTSTSRGLAGTLLPVGLLLIAMASIQSGASLAKSMFPLVGAQGT TALRLFFAALILLLLLRPWRKRLSLQSLRSVVVYGIALGGMNLLFYLSVRTVPLGIAV ALEFTGPLLVAILSSRRLLDFLWIGLAVFGIWLLLPLGNSAEPLDLVGAAYALGAGVC WALYILFGQRAGADHGAQGAALGVLVAAILVVPIGVAHAGADLLDPALIPLALGVAVL STALPYTLEMVALTRLPARTFGTLMSIEPAFGALSGLLFLGERLSPTQWLAIGAIILA SVGTTLSVKSRGAAPALPAKD" misc_feature 1471671..1472531 /locus_tag="PA1360" /note="threonine and homoserine efflux system; Provisional; Region: PRK10532" /db_xref="CDD:182525" gene complement(1472547..1473980) /locus_tag="PA1361" /db_xref="GeneID:880959" CDS complement(1472547..1473980) /locus_tag="PA1361" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="multidrug resistance protein PmpM" /protein_id="NP_250052.1" /db_xref="GeneID:880959" /translation="MNSPALPLSRGLRIRAELKELLTLAAPIMIAQLATTAMGFVDAV MAGRASPHDLAAVALGNSIWIPMFLLMTGTLLATTAKVAQRHGAGDQPGTGPLVRQAL WLALLIGPLSGAVLWWLSEPILGLMKVRPELIGPSLLYLKGIALGFPAAALYHVLRCY TNGLGRTRPSMVLGIGGLLLNIPINYALIYGHFGMPKMGGPGCGWATGSVMWFMFLGM LFWVNKASIYRASQLFSRWEWPDRATIGPLVAVGLPIGIAVFAESSIFSVIALLIGGL DENVVAGHQIALNFSALVFMIPYSLGMAVTVRVGHNLGAGLPRDARFAAGVGMAAALG YACVSASLMLLLREQIAAMYSPDPAVIAIAASLIVFSALFQFSDALQVTAAGALRGYQ DTRVTMIMTLFAYWGIGLPVGYSLGLTDWFQEPTGPRGLWQGLVVGLTGAAIMLCIRL ARSARRFIRQHERLQREDAEAASVLGR" misc_feature complement(1472598..1473944) /locus_tag="PA1361" /note="multidrug efflux protein; Reviewed; Region: PRK01766" /db_xref="CDD:234981" misc_feature complement(order(1472664..1472666,1472676..1472678, 1472766..1472768,1472847..1472849,1472859..1472861, 1473096..1473098,1473105..1473107,1473183..1473185, 1473195..1473197)) /locus_tag="PA1361" /note="cation binding site [ion binding]; other site" /db_xref="CDD:240536" gene 1474391..1474714 /locus_tag="PA1362" /db_xref="GeneID:879672" CDS 1474391..1474714 /locus_tag="PA1362" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250053.1" /db_xref="GeneID:879672" /translation="MAKADDTSNPAITAQSPSTFIPLRRTSQCNQHPGCATLYLDSSA ASEDLFDTARRRLESAIGTLSVLDLLDETEEPGESICRITGSLLSLLSDALSLFEAEY ARRHR" gene 1474727..1475467 /locus_tag="PA1363" /db_xref="GeneID:880964" CDS 1474727..1475467 /locus_tag="PA1363" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ECF subfamily sigma-70 factor" /protein_id="NP_250054.1" /db_xref="GeneID:880964" /translation="MPPGKAGGLSSGAKRGSLSALARQLRGRAKATCPLRTPTQAIPD DDRSFICDCFSFTLDPHSSEPGSFPGCIVPFDPAKPTLLSTLVRHYEELVDHVRRRFG DRGMAREVVHDVCVQLLERDEKEDVHTPLALLRKISHDAAVSRYRSDRRRTAWVEAVA ELPEVACMAATPMGRHEAEREFQALVDAIATLPPRCQAVFVMHKIHEVPQAQVADRLG ISVKTVEKHLRLGLAACRERLGRGEARP" misc_feature 1474988..1475458 /locus_tag="PA1363" /note="DNA-directed RNA polymerase specialized sigma subunit, sigma24 family [Transcription]; Region: RpoE; COG1595" /db_xref="CDD:441203" gene 1475464..1476306 /locus_tag="PA1364" /db_xref="GeneID:879987" CDS 1475464..1476306 /locus_tag="PA1364" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transmembrane sensor" /protein_id="NP_250055.1" /db_xref="GeneID:879987" /translation="MTQPSKRNGQVPLDDALERHRDALKDLFPLPPSRPKSRKASKAA GVALLLALAIGALAWLDPAYKRERFATAIGERRDVTLADGSQLLLDSGSQIEVSWHPL SRRVALRAGQVLFEVSPARYRRFVVSVGSTDIRVLGTRFNVRRLDDDVRVTLERGRVE VGTSATAQAPVVLLPGQQVDAIGGQLMPLAKVDAATAMAWKDDRLVFERTPLGEAVAL LRHYRKAPILLDDPSLASLRLTGVFAAHNVDRLLDLLPSILPVAVSRQEDGSVEIQRK STRK" misc_feature <1475668..1476270 /locus_tag="PA1364" /note="Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport [Inorganic ion transport and metabolism, Signal transduction mechanisms]; Region: FecR; COG3712" /db_xref="CDD:442926" gene 1476384..1478825 /locus_tag="PA1365" /db_xref="GeneID:878106" CDS 1476384..1478825 /locus_tag="PA1365" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="siderophore receptor" /protein_id="NP_250056.1" /db_xref="GeneID:878106" /translation="MHFSLRSRHLRPSLLASSLLLAVSAQGQEKLDVDLPAAPLGQAI NALAQQSSVQILFAGDLGAGRQAPALKGRFTPEEALRQLLRDSGLKAQARDEHTFIVV PASEAAVPATQARSEPLDMEQMEITASRTSSDLVSATRQSTVIEHAQLEELRQGSDSL ATVLAKAVPGMSDSSRTITEYGQTLRGRSMLVMVDGVPLNTNRDSSRNLANIDPALIE RIEVIRGSSAIYGSGATGGIISITTRPAGGENRAETRLSATSPLTRLGSDGLGGQFQQ YFAGSLGALDYSFDFGTRHVGASYDAHGDRIAPEPSQGDLFDSNVYNIGGKLGLRIDE NQRVQLALSHYDARQDTDYATDPRVARLPPGSVPANAIKGLELDEQNRIRNTLANLEY ENLDILGSRLSAQLYYRDYFTRFTPFDARAVSTRGGNVDQIMQNSEVFGSRLTLRTPL GESGNTELVWGGDYNQERSDMPLDVFDPAAYDASGGLVFDKIGKLTYMPPLRTRSAGA FAQLQHRFDEHWSIDGGLRYEYSTAEFDDFIPLSESKAASPVTVKGGDLDYDAVLSNL GIVYSPVAGQEIYASFSQGFQLPDVGIQLRNARRGFDIGSSNLEPVKTNNYELGWRGA IGGNTLGSLALFYTTSKLGDVQSFNNGLILTRTKERIYGVEASADWLSDDEVWGAGGS ATWMRGREKPDGKDWQDMTGYRVPPLKLTAYLQYKPDADWNNRLQATFFDSKDYRLDG VESFGRRQVSTYTTVDLVSQYRITPDDQLSLGIQNLFNRDYYPLYSQLLRNNNNTSHL PAPGTVLTASYTHNW" misc_feature 1476540..1476695 /locus_tag="PA1365" /note="Secretin and TonB N terminus short domain; Region: STN; smart00965" /db_xref="CDD:198033" misc_feature 1476744..1478759 /locus_tag="PA1365" /note="Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; Region: CirA; COG1629" /db_xref="CDD:441236" gene complement(1479021..1479791) /locus_tag="PA1366" /db_xref="GeneID:879681" CDS complement(1479021..1479791) /locus_tag="PA1366" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250057.1" /db_xref="GeneID:879681" /translation="MSFDPFGDFETTGYLRNSLGLKDPAEVKENEHFSFEMGLDEALS YLERTKNLNYQALLQVHRLLFEKFYPWAGRDRLELVPHLSVWKGPKGAPRRTFFESPA MIERAVDYALSLASKKQGFMQKPGEVMGLLCFAHPFLDGNGRSILLFYMELSYRAGFA IDWASTRKDDYLQALDDEIHNPGKGHLDRYLVPFVVPIHSRDQWPEIIGQINGLDGMD GENITYENLDDPEVQKVYAAYHAEHPYPAKDGTPDSEP" misc_feature complement(1479198..1479791) /locus_tag="PA1366" /note="Fido, protein-threonine AMPylation domain [Signal transduction mechanisms]; Region: FIDO; COG2184" /db_xref="CDD:441787" gene complement(1480215..1481051) /locus_tag="PA1367" /db_xref="GeneID:877784" CDS complement(1480215..1481051) /locus_tag="PA1367" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250058.1" /db_xref="GeneID:877784" /translation="MPVSLPFEQVDVFSEQPFKGNAVAVVIGADRLSSQQMLEFAAWT QLSETTFLLRPTVAEADYRVRIFTPLRELPFAGHPTLGSCQVWLNQGGGNAADEIVQE CLAGLIRIRRKGALLSFAAPPLLRGGAVEDEVLRRIESGLGLSPGQVLGSQWVDNGPG WVAVRLATRDEVLAIRPDYAKLDGLNVGVVAPWQGPQAEADVEVRAFMGEELNEDPVT GSLNASLAQWLIGTGVMPGRYTASQGTALGRRGRISVEQIGGDIWIGGEVQPGMSGQV VF" misc_feature complement(1480224..1481042) /locus_tag="PA1367" /note="Predicted epimerase YddE/YHI9, PhzF superfamily [General function prediction only]; Region: YHI9; COG0384" /db_xref="CDD:440153" gene complement(1481334..1482758) /locus_tag="PA1368" /db_xref="GeneID:881140" CDS complement(1481334..1482758) /locus_tag="PA1368" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250059.1" /db_xref="GeneID:881140" /translation="MKRFIQGEHRGQCTLLPERLDDYVADTNPVRVVDVFVDELDLGR LGFGGVVPAETGRPAYHPAVLLKICIYGYLNRIQSSRRLEREAQRNVELMWLTGRLMP DFKTIANFRKDNGKAIRGVCRQFVVLCQQLSLFSEALVAIDGSKFKAVNIRDRNFTSA KLQRRMEEIESCISRYLTALDTADRQEPAVARAKSERLHSKIAALKMQELRDIEVQLE ATPDKQISLTDPDAHSMMTRGTSMVGYNVQAAVEAKHHLIVTHEVTNNGIDRDQLSAM AKQAWVAMGTQSLSVVADRGYFKGEEILSCHEAGITTFVPKAKTSGAAAAGRFGRDDF IYDTAQNEYRCPAGERLIWRFATVEKGLKLHRYWNSNCQGCALKDQCTPSAQRRVSRW EHESVLNAVQSRLDQAPEMMRIRRQTVEHPFGTLKAWMGATHFLTKTLNRVSTEMSLH VLAYNFKRVLNLLGNSALIAAMKA" misc_feature complement(1481373..1482740) /locus_tag="PA1368" /note="IS1182 family transposase; Region: transpos_IS1182; NF033551" /db_xref="CDD:468080" gene 1483123..1483875 /locus_tag="PA1369" /db_xref="GeneID:879565" CDS 1483123..1483875 /locus_tag="PA1369" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250060.1" /db_xref="GeneID:879565" /translation="MNQEQLASVNLKIGNCDFKGAADEMLAIAKSLSESGSESLSDFL ASYAHGLAGRKSDTSKFSQSLKDKIERGEKDLSDKGDQVNTLMHEVYGYFLEFEKISI LQNALLLRPMFFRLENRENFPFIEKFVNGSDTYITGENFYEVFKKQINFYLNLSAYGE KSVLHIGQRKTNIAKGKYWKFVELSGQYKQKISCLDRVQVLLDEQESLEKELTGLRSK LRSNNAAAHLSQSEFNRDLESFMTGLATEETK" gene 1483898..1485763 /locus_tag="PA1370" /db_xref="GeneID:881106" CDS 1483898..1485763 /locus_tag="PA1370" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250061.1" /db_xref="GeneID:881106" /translation="MSSKDENKKNSLMDLATLDDFARINPASIMAMSNSLHFHTLEHT FREAAQTAKNAGDVAAFRAFNVLAVVCSYHFNPSRPDTFSPQIIFKGKRTLIPSDYLG EQQGILVQIAEQIDHPLLRARIADSCWHVNRRLHAVAALAASSYLNAVELFFKRELLD QYESDFAVPFKVVDLIDRAFAIYALAGKQKEIPESAKDVLKLAYETAKDNECLVAFVK LSSIAQTCGLLEWQDIAGAAEAIANATKDKLYADAVKRVWLQAARAYLKMDDKESAVR CRVNAVEQTLRMRDAVSSAMAKASWTRSAIGELRAIGGMAVRVESLKIELQQYEEDSL SEFGSFSVPVDLTDERQATIEEFESLDVHEMLLRLAFTCRAPEKIALHKNCLEKREKY FFSSMSGKSYADERGKVIATAPPVPLGSQPPEEWFAHESLSEAGLHYHIATEAFIRPA CITMSRCQLIDERHFEPIVCSSGFVPPGFEAIFSQGFSKLVQGDMVSAAHMLIPQLEN ALRHVLNNRRSNTAKLNVDLTQEDQSLKQLLSNYWREIEQVFGVDNTYLFHILFNLKG GPMLRHEVAHGKLSTAQCYEPSCIYACWFIFHLTCVPLAPQWNSVMAGAIQENAS" gene complement(1486266..1486967) /locus_tag="PA1371" /db_xref="GeneID:881116" CDS complement(1486266..1486967) /locus_tag="PA1371" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250062.1" /db_xref="GeneID:881116" /translation="MNRTDVTRGINKTWEIASKLNLNESFANAGLLPLNEEFRDLILS SKTTYSSVYVAGLSLSHYNILLTDYSYFQFSWDRENYVRYAYYPNPFISGKDNELESF RRLQELVESGLLQHEEYLTILSERSAMSGIPMLRYENAPDQRKKFAHPCSHFHIGFHS ENRWPVRRILTPYAFSLLVFKNYYGSFWRASGDNGEMEEGNSHEEELISEKALCRLVD YINFEEIEERSFYFA" misc_feature complement(1486269..1486967) /locus_tag="PA1371" /note="Uncharacterized conserved protein (DUF2290); Region: DUF2290; cl02396" /db_xref="CDD:470564" gene complement(1486960..1489095) /locus_tag="PA1372" /db_xref="GeneID:881109" CDS complement(1486960..1489095) /locus_tag="PA1372" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250063.1" /db_xref="GeneID:881109" /translation="MSIDILVTTDRLNKDPLGREFISYIESNSDRLNLAGSALYYDFP AYSDYDTVTHKPDVLILSPAHGILAIRLINLARLNQGALSQADESLNQFCSILIGRLL KSKPLREGRSKLSFEVTPVIYCDQKTDVLPEDLDCELVSSYGAFEALIEKLKDRESNA ETLSEIRSVLEGAKALTRASKRIVEDPEVTPAAAALAKLESEIANFDQKQRRAALVTI DGPQRIRGLAGSGKTVILAMKAAHLHMTRPNDKILVTFFTKSLRSPIKDLVTKFYRHY KEIDPDWNNIHIRHGWGGSNSSGTYADACRRSGRMPRSYSSARDAAPRGVEPFSFACE ELINSAQSLEYYDHILIDEGQDFPDGFYKLCFELAKGDRDKKNIVWAYDELQNILNVK MRSPAELFGQDDDGEPRISLARAEKNLPPGATNDTVLSKCYRNQREVLVAAHALGFGI YSNIVQLLESPDHWRDVGYDVLTPDFQVGNDIEILRPVENSPVALDTDGLPPLIGNFI ASSFEKEISWITKEIINFLDMGLLPEDIIVVALDDRHMRNYFRYLSESLASHEISVNN IHADPYSEPPFSISGKITLSTVYRAKGNEAAVVFALGVDALSLRLRADRNKIFAAFTR TKAWLRVSGLGDSARRVAVEIDTALRNFPHLKFKMPDISEIDLIQRDLSKRSIKAKKI RNEYIQKLKDEGFTEDEIADILSLEEKDE" misc_feature complement(1487143..>1488489) /locus_tag="PA1372" /note="Superfamily I DNA and RNA helicases [Replication, recombination and repair]; Region: COG3972" /db_xref="CDD:443172" gene complement(1489815..1491083) /gene="fabF2" /locus_tag="PA1373" /db_xref="GeneID:881126" CDS complement(1489815..1491083) /gene="fabF2" /locus_tag="PA1373" /EC_number="2.3.1.41" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-oxoacyl-ACP synthase" /protein_id="NP_250064.1" /db_xref="GeneID:881126" /translation="MSKRIVVTGMGAVSPLGCGVEPIWQRLLAGQSGIATLPAELIGD LPISIGGQVPDRARDPQAGFDPDLLLAAKEQRKMDRFILFALAAAQEALAQAGWAPQS AEAQERTATVIASGVGGFHAIAEAVRTTDGKGPRRLSPFTIPSFLCNMAAAHVSIRHG FKGPLGAPVTACAAGVQAIGDAARMIRAGEVDVALCGGAEATIHRVSLAGFAAARALS SDFNDSPERASRPFDQARDGFVMGEGAGLLVIEELEHALARGARPIAELVGYGTSADA YHMTAGPEDGSGARRAMQQALRQAGVEAAAVQHLNAHATSTQVGDKGELAAIKAVFGA GSGLAISATKSATGHLLGAAGGIEAIFTVLALRDQLAPATLNLETPDTDAEGLDLVRG EARRWPMEHALSNGFGFGGVNASLLFRRWV" misc_feature complement(1489818..1491083) /gene="fabF2" /locus_tag="PA1373" /note="beta-ketoacyl-ACP synthase; Region: PRK06333" /db_xref="CDD:235781" misc_feature complement(order(1489848..1489850,1489854..1489856, 1490211..1490213,1490253..1490267,1490442..1490447, 1490454..1490459,1490520..1490522,1490529..1490534, 1490541..1490543,1490577..1490585,1490589..1490591, 1490595..1490597,1490613..1490615,1490625..1490627, 1490637..1490639,1490655..1490657,1490691..1490696, 1490700..1490702,1490712..1490717,1490736..1490738)) /gene="fabF2" /locus_tag="PA1373" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238430" misc_feature complement(order(1490037..1490039,1490145..1490147, 1490568..1490570)) /gene="fabF2" /locus_tag="PA1373" /note="active site" /db_xref="CDD:238430" gene 1491192..1491698 /locus_tag="PA1374" /db_xref="GeneID:881125" CDS 1491192..1491698 /locus_tag="PA1374" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250065.1" /db_xref="GeneID:881125" /translation="MQRKTFADAECPIARSLERVGEWWSILIMRDALQGLRRFDEFSR SLDIAPNMLTRRLNALVEAGLLERQPYSQRPLRYQYVPTAKGEDFRVVLMAFVAWGNR HYAEEGQSVQLVERTSGRPVRSFMAALADGRTVPLEQCTVQAGPAASEEMRQRLAAMP ERSELPAR" misc_feature 1491198..1491515 /locus_tag="PA1374" /note="DNA-binding transcriptional regulator, HxlR family [Transcription]; Region: HxlR; COG1733" /db_xref="CDD:441339" gene 1491913..1493055 /gene="pdxB" /locus_tag="PA1375" /db_xref="GeneID:881132" CDS 1491913..1493055 /gene="pdxB" /locus_tag="PA1375" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="erythronate-4-phosphate dehydrogenase" /protein_id="NP_250066.1" /db_xref="GeneID:881132" /translation="MRILADENIPVVDAFFADQGSIRRLPGRAIDRAALAEVDVLLVR SVTEVSRAALAGSPVRFVGTCTIGTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGC LLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVS LERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALR RLLEGGADLEVALDVWEGEPQADPELAARCLIATPHIAGYSLEGKLRGTAQIYQAYCA WRGIAERVSLQDVLPETWLAGLQLNPGCDPAWALATLCRAVYDPRSDDAAFRRSLTGD SATRRAAFDALRKHYPPRREITGLRVATGGQAELQRVVRALGAQLV" misc_feature 1491913..1493052 /gene="pdxB" /locus_tag="PA1375" /note="4-phosphoerythronate dehydrogenase PdxB; Region: PRK00257" /db_xref="CDD:166874" gene complement(1493090..1494823) /gene="aceK" /locus_tag="PA1376" /db_xref="GeneID:881156" CDS complement(1493090..1494823) /gene="aceK" /locus_tag="PA1376" /EC_number="2.7.11.5" /EC_number="3.1.3.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bifunctional isocitrate dehydrogenase kinase/phosphatase" /protein_id="NP_250067.1" /db_xref="GeneID:881156" /translation="MVQSAPASEIAALILRGFDDYREQFREITDGARARFEQAQWQEA QRASAQRINLYEEKVAETVAGLRAGLADSELLDVERWPIIKSAYIAQIDLRLDDELAE TWFNSIFCGLFSHDNISDGTMFVHTTRPSLRAHARAPYTRTYRPGGDLRQALEKIFDD YRFDVPYDDRERDLERIDALLHSNLPDWVCKDPDLAIELIGSVFYRNKGAYLVGRLFT PDEQWPLVFPLLHREDHGIQFDTVITDEAEVSIIFSFTRSYFMVDVPVPAELVAFLKR LLPGKHLAELYTSIGFYKQGKSEFYRALINHLATTDDRFVMAPGVRGMVMSVFTLPGF NTVFKIIKDRFNPSKSVDHATVIQKYQLVKNHDRVGRLADTQQFADFRFPVSKFEPEC LAELLEVAPSTVVMEGDVVLIRHCWTERRMTPLNIYLENASEAQTREALNDYGLAIKQ LAAANIFPGDMLLKNFGVTRHGRVVFYDYDEICYLTEVNFRYIPEPRFPEDEMSSEPW YSVGPNDVFPEEFPRFLFVDLNQRRLFAKLHGNLYDAKYWQGLQEQIREGKVIDVFPY RRQETPEQLLG" misc_feature complement(1493117..1494820) /gene="aceK" /locus_tag="PA1376" /note="bifunctional isocitrate dehydrogenase kinase/phosphatase protein; Validated; Region: aceK; PRK02946" /db_xref="CDD:235089" gene 1494959..1495492 /locus_tag="PA1377" /db_xref="GeneID:881141" CDS 1494959..1495492 /locus_tag="PA1377" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250068.1" /db_xref="GeneID:881141" /translation="MTAESPTIRLERYSERHVEGLTALYNDPAVARQVLQMPYQSVEQ RRKRLHDSADDDRLLILVALHQGDVIGSASLEQHPRIRRSHSGSIGMGVAVAWQGKGV GSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGEMRDYAVRDGRFV DVYSMARLRRVEGRVGE" misc_feature 1494992..1495465 /locus_tag="PA1377" /note="NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, from bacterial antibiotic resistance to circadian rhythms in mammals. Members...; Region: N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate; cl17182" /db_xref="CDD:473072" misc_feature order(1495229..1495237,1495265..1495270) /locus_tag="PA1377" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene 1495635..1495997 /locus_tag="PA1378" /db_xref="GeneID:881448" CDS 1495635..1495997 /locus_tag="PA1378" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250069.1" /db_xref="GeneID:881448" /translation="MTKDPATDSGLNVRLVAAFAGWKGIPWLCWAHSDLSPRLVLHAD RVEFRVIRTRSKPYSSISRVDYRKWHYTENIVLEFTDSLTTFIGNTMNPATARQAIRY LQEKGCPLSERASNLAMA" gene complement(1496087..1496920) /locus_tag="PA1379" /db_xref="GeneID:881131" CDS complement(1496087..1496920) /locus_tag="PA1379" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_250070.1" /db_xref="GeneID:881131" /translation="MSFRKTLLITGASSGFGQALAREALDAGHRVVGTVRSEEARSAL EAVAPGQAFGRLLDVTDLAAIEPTVAAIERDIGPLDVLVNSAGYGHEGILEESPLAEM RRQFEVNLFGAVAMIQAVLPYMRRRRRGHILNITSMGGYITMPGIAYYCGSKFALEGV SEALGKEVAGLGIAVTAVAPGSFRTDWAGRSMVRSPRTIADYDALFDPVRQARQEKSG KQPGDPRKAARAMLQAIDAENPPAHLLLGSDALGLVRQKLKALEEEIAAWEEVTRSTD G" misc_feature complement(1496090..1496920) /locus_tag="PA1379" /note="short chain dehydrogenase; Provisional; Region: PRK06180" /db_xref="CDD:180446" misc_feature complement(order(1496360..1496368,1496372..1496374, 1496459..1496461,1496471..1496473,1496510..1496518, 1496597..1496599,1496657..1496668,1496744..1496752, 1496813..1496815,1496873..1496884,1496888..1496890)) /locus_tag="PA1379" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:187632" misc_feature complement(order(1496459..1496461,1496471..1496473, 1496510..1496512,1496594..1496596)) /locus_tag="PA1379" /note="active site" /db_xref="CDD:187632" misc_feature complement(order(1496171..1496173,1496306..1496308, 1496315..1496317,1496357..1496359,1496375..1496380, 1496471..1496473,1496489..1496491,1496504..1496512)) /locus_tag="PA1379" /note="steroid binding site; other site" /db_xref="CDD:187632" gene 1497012..1497977 /locus_tag="PA1380" /db_xref="GeneID:879384" CDS 1497012..1497977 /locus_tag="PA1380" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250071.1" /db_xref="GeneID:879384" /translation="MSASLPDSEAIRSADRQRMVALLENLAPQEGYNLTGLDCVRLLR SDRPLARTPVLYDPGIVIVCQGRKRGYFGEQIYLYDEQHYLAVAVPVPFTMETDATPE RPLLAIYLHLDFPLAAGLAVEIDRQRALAQVEAPRSLMSSPMDAPLRASVLRFLEALG DPLETAILAPALLRELYFRVLTGPQGGAMRAALAMRGRFGNIARALRRIHAQYAEPLE LAQLAGEAGMSVPSFHSHFKAITQTSPMQYLKCTRLHQARLLMVRQGMSAQAACHAVG YASASQFNREFKRLFGRSPLAEARRLRAGFSLPPAQGEAEYVSSH" misc_feature 1497120..1497575 /locus_tag="PA1380" /note="AraC-type transcriptional regulator N-terminus; Region: AraC_N; pfam06719" /db_xref="CDD:461994" misc_feature 1497657..1497896 /locus_tag="PA1380" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene 1498338..1498829 /locus_tag="PA1381" /db_xref="GeneID:879319" CDS 1498338..1498829 /locus_tag="PA1381" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250072.1" /db_xref="GeneID:879319" /translation="MTSHAFARWNLLLLVASIFAGLVFAPSVDLSALPTPEARKWVLA EVPSVAVDTTVAGKLAGMSWWGRTVDEEREAESKRVSVGVDGVALIKVDWLLRGIVRD EGGIFALVAKSAEGPLRRFAAGATLPGGERLESITEQGIRFSFSQDGNTQGFERKLYA PLP" gene 1498813..1501092 /locus_tag="PA1382" /db_xref="GeneID:879414" CDS 1498813..1501092 /locus_tag="PA1382" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="type II secretion system protein" /protein_id="NP_250073.1" /db_xref="GeneID:879414" /translation="MHPCHRPSFAFLRHPLSIVVCLALLAGCSTSPLQFPEPLLAKSE KAKATEGVALVSDDGKKAPASLAVPKTEFSGTPTSPRSIVGGVVDRMDKAILDDKKAD ISLNVEDVQLAAFINEVFGNILGLPFEIESALKEKTDRVTVRLEQPQTAQMVYEVARQ VLVNYGVEILHQGDIYRFQIKQVGLSPDEPPILISGEARPSVPIAYRPVFQFVALHSV DPKDVIPWLNSAYEKSGLSVMADGARSGLMLKGMSSIVNQATEAVRLLDQPFMRGRHS LRIDPAFVSAADMASQLKTVIAAQGYSVGIGEAVGSIMLVPLESSNGLIVFANDGQLL DLVREWAQQVDRAPMAVAAGIGEEKEGLFFYEARNTRVTELAKSLRALVSGFAGEGAY GITSGLQSSASKRSGGGRRAGDDGAAPAVAPLLQAAGAAALVGGDGANGLLGGLAAGI SGSGTIVEDENRNAILFRGAARTWQQMQGLLREMDKPARQVLIEVTVASVSLSDTQEL GVEWEMLNGSFNSATSTGSKGSAGKGGFNYVINTAGGNTAAIQAMADNQRVRVLATPR ILVKSGEQANINVGRDIPIPTAQVNDDSTTAGSTNLRNEIAYRSTGTILNVAPVVYSD SRVDLTVSQELSDSGGSSGGGGKASGGGISAPEISRTSLETSLTLKSGGSVLMGGLIR DNITDSNAGVPLLKDIPGIGFLFGRQKAVKTREEVIMLIQPYVLESDADAREVTEKLH AMLSKTLACSDRPGACRME" misc_feature 1499125..1501020 /locus_tag="PA1382" /note="type II secretion system protein D; Region: type_II_gspD; TIGR02517" /db_xref="CDD:274175" misc_feature 1500130..1501038 /locus_tag="PA1382" /note="Type II secretory pathway component GspD/PulD (secretin) [Intracellular trafficking, secretion, and vesicular transport]; Region: PulD; COG1450" /db_xref="CDD:441059" gene 1501611..1503416 /locus_tag="PA1383" /db_xref="GeneID:883109" CDS 1501611..1503416 /locus_tag="PA1383" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250074.1" /db_xref="GeneID:883109" /translation="MLKRTLLSAAVASALFAGVANAAGVVAIATSPTLEANSPGATEQ YGPGQANYVVGKSVENGANLDSKAANITLAQEIFGNKSEETTFDLPSVTYTIDPVKAG NAAAGHTIKLTLGRTVVRFAKAVTANQIKIGALAAGSGFVITSGTGATDNTLELRLDQ AGADMIKQTATGGNVVFFNFREPSSQDSQPAKVTNMRAPLQGDATFVAGSWNPKVSLQ NDPLNELRFQVTVSAQFDTTTGADAGNPANNDSAPPLTIFTSLPAVYWDVLNTNQYGQ NRVLHPLNLNNQDRSFDTTVSVGGDNTDYYGANYARLGAVRLGINTDVLNEAGRTVFG FAGGDKVTSTLSGNFNGISDIGLTTGNCSAFAANPGSAAKLWNSAAIEGVVDAQGNGT LPVSFDNSNINQTYNVCVKASGTVPMQALQRFDVGDLKVDFENVRYVDRTIAGNRLDE FWKNSCVASLFNLPGSNVSDQFFIRLTNTSDDGRDGKVRGVLFDQNGKRYPATGSTYL TDSSGKTALKAHETGVYTVTEVAKAFGIDGTNWNGANGRARLVLEGEFPTCEALGLIR SANGTITNMTSTTQGNFNEDGSSTSENHKAGNNRN" gene 1503568..1504581 /gene="galE" /locus_tag="PA1384" /db_xref="GeneID:878496" CDS 1503568..1504581 /gene="galE" /locus_tag="PA1384" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="UDP-glucose 4-epimerase" /protein_id="NP_250075.1" /db_xref="GeneID:878496" /translation="MRVLVTGGAGFIGSHVLVELLGQGAKVVVLDNLVNGSSESLKRV ERITGHPVGFVLGDVRDSLLVERLLIDEKVDAVIHLAGLKAVGESVDDPLEYYESNVQ GTISLLRAMQRVGVFKIVFSSSATIYQMPGTLPISESSKVGGVASPYGRTKLTAEHML DDLARSDTRWSIAVLRYFNPIGAHESGLIGEDPCGTPNNLLPYIAQVAVGRLSRLTVH GGDYPTIDGTGVRDYIHVCDLAAGHTRALEYLGQGHGYHVWNLGTGTGYSVLQVIEAF ERVSGRRIPFTVSGRRPGDVAECWADVSKAERELGWKAGLGLECMIADAWRWQVSNPS GYS" misc_feature 1503568..1504578 /gene="galE" /locus_tag="PA1384" /note="UDP-glucose 4-epimerase [Cell wall/membrane/envelope biogenesis]; Region: GalE; COG1087" /db_xref="CDD:440704" gene 1504605..1505729 /locus_tag="PA1385" /db_xref="GeneID:879332" CDS 1504605..1505729 /locus_tag="PA1385" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycosyl transferase family protein" /protein_id="NP_250076.1" /db_xref="GeneID:879332" /translation="MPFSNLALISNQAFSIYNFRGDFIREVVRRGAKVYAFAPDYDEV TSRQVSELGAIPVSYSLKRAGMNPFQELHALLSLICKLRALKIDAVFSYFIKPVIYGG IAAFLTGVRLRYSMIEGAGFIYSEEGYTHFLRKLLRHVVTCSIRLVLRFSSRVFLLNQ DDYDLFVSPRLAKTGRALILPGIGVDLDYFAASSPVLRPITFVFVARLLKEKGIYDFV EAARIVRKRSPLARFLVLGGVDSNPGKVSREEMNQWVAEGLLEWPGHVHDIKAWVANT SVFVLPSYYREGVPRSSQEAMSLGKPVITTDWTGCRETVLDGFNGFLVPIKSPQSLAA AMLKFIESPSLIARMGEASRSLAEQRYDVFRINNTMLSAL" misc_feature 1504617..1505717 /locus_tag="PA1385" /note="capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins; Region: GT4_CapM-like; cd03808" /db_xref="CDD:340837" misc_feature order(1504695..1504697,1505217..1505225,1505409..1505411, 1505478..1505480) /locus_tag="PA1385" /note="putative ADP-binding pocket [chemical binding]; other site" /db_xref="CDD:340837" gene 1505749..1507017 /locus_tag="PA1386" /db_xref="GeneID:879352" CDS 1505749..1507017 /locus_tag="PA1386" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_250077.1" /db_xref="GeneID:879352" /translation="MKGNAPVLAAVDISKGFRVYRAPHQRMLQAIWGERKKFYSEFWA LRNVSFQVFPGEVVGVIGCNGSGKSTLLQILAGTLRPTSGQVVRPERVAALLELGAGF NMEYTGRENIIFNAMLLGLGEQEISERLDEIIQFADIGEFIDRPVRTYSSGMFVRLAF SIAAYVDADVLIVDEALAVGDAAFQFKCLNRLEELLLKGITILLVSHDIQLIKSYCSR AIYLSKGRVIFDGDCETATELYLRDSIETQRAEVRSGSLIASGEHGNSVIAYGNGQGR FLSIRMGVLDEARDYFDSGERVWVEVLVQFDLPVPEHPKITLTIRDQRGYNLYGINNL LLGKALNVEPDGRLRTRISFDCDLQAGEYALTFRLENSLSESVCELMDKKVNAAIFRV FNSPKCFDAVVNLHGAFEPVPFCCETRATQ" misc_feature 1505761..1506477 /locus_tag="PA1386" /note="ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism]; Region: TagH; COG1134" /db_xref="CDD:440749" misc_feature 1506556..1506963 /locus_tag="PA1386" /note="Wzt C-terminal domain; Region: Wzt_C; pfam14524" /db_xref="CDD:464200" misc_feature order(1506556..1506558,1506697..1506699,1506742..1506744, 1506850..1506852,1506895..1506897,1506901..1506906) /locus_tag="PA1386" /note="putative carbohydrate binding site [chemical binding]; other site" /db_xref="CDD:199902" gene 1507164..1508720 /locus_tag="PA1387" /db_xref="GeneID:879767" CDS 1507164..1508720 /locus_tag="PA1387" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250078.1" /db_xref="GeneID:879767" /translation="MPSDASRRLYERLGIPLLPMDSPFGPEYPIGNKFAALALGPAVG HTLFLDSDMICVDAFEADMLCRFDAALKPADMALVAKQNDYWERIYAHAGSALPGDRV VTTCSGEAMPAYYNAGFILVRDARRFAEVWYRLAERVHADPLITNKMPWLDQLTLPVA LHALNYKTRALSERFNYPLHIKPLSAASLPPFFCHYHSLDTLVSERSLWAELDELAKR FPELREVLALDANWKKAILAPAPRLAFSEGDSTGTVEAGQDLVITGIPRSGTSHLCRL LSQQPDTVVLNEPPQVFEALKLSPLPWGLPRYYAELRRDILAGRPVPNKHVNGRLVDD TARGNDQSSDYFAEVRGASFHLGTKNTLAYIARLPLIRKVMPTALLIATIRHPYDTLN SWANTFEHLRQAAVERQPFGCPDDLALTGWQRKALLAIADTDHLAVRRALWWRYLALQ LEDAGDYVQLLRYEDFVEAPQTTLAALRNNRPLPFDEPAVWSKGLAPDEQELVANIVC DVAERFHYVL" misc_feature <1507302..>1507751 /locus_tag="PA1387" /note="lipopolysaccharide 3-alpha-galactosyltransferase; Region: PRK15171" /db_xref="CDD:185093" misc_feature 1507941..1508594 /locus_tag="PA1387" /note="Sulfotransferase family; Region: Sulfotransfer_3; pfam13469" /db_xref="CDD:463887" gene 1508737..1509465 /locus_tag="PA1388" /db_xref="GeneID:879401" CDS 1508737..1509465 /locus_tag="PA1388" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250079.1" /db_xref="GeneID:879401" /translation="MLDISLIMNFHAEDVLAHWSLLGFQRMREFASHHGVSVQLVAVL DRASQTTRRIVRQHPILREGDKVLQVEHGDLGLSRNAGIDSADASTVGVLDGDDYCSA NWLVEALQVVSEKGNGVVVHPEYTVSHGACHLLGRSVDQLSEDYPVESCFKHHPWVSV AVAEKAVFQELPYLETRVGKSGFGYEDWHWNLEVIASGRKHTLASGTCLFYRRKEASM LAAMGALNAVVRPGRFFDGRCFDH" misc_feature 1508848..>1509105 /locus_tag="PA1388" /note="Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Region: Glyco_tranf_GTA_type; cd00761" /db_xref="CDD:132997" gene 1509562..1511046 /locus_tag="PA1389" /db_xref="GeneID:879276" CDS 1509562..1511046 /locus_tag="PA1389" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycosyl transferase family protein" /protein_id="NP_250080.1" /db_xref="GeneID:879276" /translation="MSLNGRLKARAASFARTAYPPILGSLRRVLSERQLQRFILVCDR LKGWLLKEAVVVPSPSPMALPPWIVDEMKALARIEPALYPSAAKLRVFTSWKAPIDNG PAQLYRGCLADFIEYAPDMVFLVPHLQRGGADLGILHHVRLCAEMGVKVTVVVTRDVV SPWLNRLPAEVRVVEFGRLGNLLGEEDRRLVLLRLLLQCPARSIHIINSQLAWELLER HGKTLTFEGKRIYASVFCDDLDGNAVRCGYASEFLPRSWMHLAGLLSDNRTFLQQIHE RDGIPPELMHGLYFPASDHAEAIPTAGSTILWASRISPQKRPDLLYEIALALPEYLFE VHGEVDPACRGETQRKLRRLPNVRLHGRYDSFQALARQGRYAMLLYTSRYDGLPNILL EATAAGLPIVAPDVGGIAEFLNTETGYLVGADADAGEFARAIRSALGNPGETARRVKR ARELLTRRHGWAAFRDAARNIPGYLPGGVRPEQEVSMETEPVSG" misc_feature <1510426..1510974 /locus_tag="PA1389" /note="phosphatidyl-myo-inositol mannosyltransferase; Region: GT4_PimA-like; cd03801" /db_xref="CDD:340831" gene 1511232..1512266 /locus_tag="PA1390" /db_xref="GeneID:879419" CDS 1511232..1512266 /locus_tag="PA1390" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycosyl transferase family protein" /protein_id="NP_250081.1" /db_xref="GeneID:879419" /translation="MVIPCFNHGRYLRRALDSLARQSFQDFEIILVDDGSDDPSTLGL LEALQEPGMTILRQPNRGPSAARNAGVARARGRYICCLDADDWLASTYLEKCLVLLEG NSGVRLAYSWVQLVGEEHRLHRSAGFHPGLLRYFNPFCVSAIFHRDDWLAVGGFDEAR EAQFEDWDFWIALVGCGVRGRLIREPLLFYHRQVGSRLETGKRHALSSYKRMRTRHPR LYRGSPFLRAQRQGYYDCWAYPPLLNLSRADQYNAVLSDAVAVVADAPLTEDWNAWRR QFDELPASSTVFVIAGGCRKLPGWLLERASAIYWLDDLLHERQWSAFIDNFRRTRGIS KVFSVGRTAW" misc_feature 1511235..1511750 /locus_tag="PA1390" /note="Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Region: Glyco_tranf_GTA_type; cd00761" /db_xref="CDD:132997" misc_feature order(1511241..1511243,1511247..1511249,1511325..1511327, 1511478..1511480,1511484..1511486) /locus_tag="PA1390" /note="active site" /db_xref="CDD:132997" gene 1512260..1514035 /locus_tag="PA1391" /db_xref="GeneID:879386" CDS 1512260..1514035 /locus_tag="PA1391" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycosyl transferase family protein" /protein_id="NP_250082.1" /db_xref="GeneID:879386" /translation="MVKVLSRGPVADAVPLLSILTACDCSVEEFERIAAFLETQTLKR WCWIHCPGVDSDCLPVEGMAVLYLPRAPAALRATALEEAIWFLLSLPTLPWVELREDA RRGDLFVSRRSLPEGRIGARLNGRRQPCSSAMLAPGSLPKAPGKRLLLLAPWLEPGGA DRCNLDLLRALAREGWMLTVVASLAAEHRWRDRFTALTADVWVLPDFLSAEKACGFLA YLVDSRQPDLMLLSNSAFAYDVLGYVRTRYPGLPVVDLNHMEEGWDDGGHPGRAARCT ALLDRHWVVSGHLRHWLLDRGVEASKVEVLHWFADVDSWKPDSLTRAKVRARLGIAPQ CVVIAYAGRLCAQKRPELFAASLGELARRGSDFVALVLGDGELAGELRNDLRRHGLAG RVRMLGWQDEAALRELFQASDIFFLPSAGEGIALVLYEAMACGMAIVAADVGGHAELV SAHCGFLVPRRDAEREARDYAARLESLMREPEMLGRMGQNSARRIREAFTLSLFERRL RELLERVPVSTPCGVCTDSPVPALGAARLSMQWASYRLANGLRCRLDIQKHGRFSRFL ERCAKGVFFLRTFGAKALWQKIRKH" misc_feature 1512698..1513765 /locus_tag="PA1391" /note="phosphatidyl-myo-inositol mannosyltransferase; Region: GT4_PimA-like; cd03801" /db_xref="CDD:340831" gene 1514036..1515280 /locus_tag="PA1392" /db_xref="GeneID:879380" CDS 1514036..1515280 /locus_tag="PA1392" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250083.1" /db_xref="GeneID:879380" /translation="MNREVSSMTPRVVVILGMHRSGTSVLSAGLEALGVEFGENLIPP RPDNPKGYWEDARLVAFNDRVLSLCGFSSGDVGLSSRRVLGVERFEEIVQQAMALLTE LLAGKALLGIKDPRMPRLMPIWQAAFDALGLWVDYVIAARHPLSVAESLATRDHLSRE KSLMLWYEHSCRSMQWALHKGAVVVDYDRLLALPRQELGRIGHRLSLPVDESACARFV GDVLDVALRHSSHDASALAAAAGSFQALLEVHEALQQLAVDRFDIEGWKGLEREFSRA MPLLEYVGELDRQLWQSASSHNESMTRFSEQVADLAMSYTAQRQLNDGLRDRLLEAGA RDEQNERAMRELSRRLSVCREELVSAQRNLAETDNLLRRTQVDRDDTHARLMAILDSR FWRFTKPLRNLSRLFGSETGCP" misc_feature 1514051..1514803 /locus_tag="PA1392" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3551" /db_xref="CDD:442772" gene complement(1515337..1515927) /gene="cysC" /locus_tag="PA1393" /db_xref="GeneID:877968" CDS complement(1515337..1515927) /gene="cysC" /locus_tag="PA1393" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="adenylyl-sulfate kinase" /protein_id="NP_250084.1" /db_xref="GeneID:877968" /translation="MNPREHGKRSIDNETRSALKRQRPAVIWLTGLSGAGKSTIASAL ELALFEQKKHTFLLDGDDLRLGLCRNLGYSDEDRTENIRRIAEVAKILLEAGLIVIVA TISPFSRDRRLSRELIGIEHFIEVFVDTPLSECERRDPKGLYRKARSGKIENFTGIDS IYETPAQPNITIDTLSEDPDLAVKRIISYLETNQPA" misc_feature complement(1515355..1515900) /gene="cysC" /locus_tag="PA1393" /note="Adenylylsulfate kinase or related kinase [Inorganic ion transport and metabolism]; Region: CysC; COG0529" /db_xref="CDD:440295" gene 1516433..1516687 /locus_tag="PA1394" /db_xref="GeneID:877935" CDS 1516433..1516687 /locus_tag="PA1394" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250085.1" /db_xref="GeneID:877935" /translation="MTRQSALATGPEASDWWRFGSGDEPARKLFFAGGRSLAASRKPA AAPRGMAVAEQANRAQASGQDAAPGLRAFDLLPGNPPKNP" gene 1516703..1517119 /locus_tag="PA1395" /db_xref="GeneID:879425" CDS 1516703..1517119 /locus_tag="PA1395" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250086.1" /db_xref="GeneID:879425" /translation="MRRIFIAPLLASLSLGGCIQMDTLPEVYARSQWKGRSAEEAIAF FGTPQNMERTADGSQVVMQWYTDTSYSRYEVVGSSSEMQGNVMVNTNYWDTVNHPNRC IISVTVDKSKRITQFEADDGELLLSHGCAGIKYGPP" gene complement(1517146..1518768) /locus_tag="PA1396" /db_xref="GeneID:879363" CDS complement(1517146..1518768) /locus_tag="PA1396" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_250087.1" /db_xref="GeneID:879363" /translation="MKFEKNTELDQANLRLIVATCAILYVVLIGLLPGLKVETYLPIV AYYGLFLIASILLRQAIVRWPGHYPARRIFCMLHDYAGTSFGLIVGGEAALPLYAVMV WINLGNGMRYGSRYLAIATALALLALLVIYRLTPAWQAQPFMVLMLMTTSTVIPFYAH LLLERTRKATEEALQANQEKSRLLAQASHDLRQPIHSIGLFTACLRDARLGDEERRLV DNIDRSLLNVSQLFRSILDLYTLDNGRLQPKQENVHLGELLRDLVRRNAEAARWAGVE LRLRPCRLWTRTDPGLLSTMLQNLLSNSFKYAAERPLLIGVRRRGDGLAVAIYDQGRG IAEEHLPRVFEEFYRVRETRDRDVEGIGLGLSIVRRLGQLTGIEVTLRSRVGRGTAVT LHGLPAVAAQALPRRDDPLQAGLLTGLRVCLVEDDRNVLRATSALLERWGCTVQAETE ADGWRTDCDILVVDYDLGPHASGVECIERVRRQRGEAIPALVISGHDIERIQASVEDT DIALLSKPVRPTELRATLRALRERPVTASHAS" misc_feature complement(1517575..1518555) /locus_tag="PA1396" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: BaeS; COG0642" /db_xref="CDD:440407" misc_feature complement(1517170..1517523) /locus_tag="PA1396" /note="CheY-like REC (receiver) domain, includes chemotaxis protein CheY and sporulation regulator Spo0F [Signal transduction mechanisms]; Region: CheY; COG0784" /db_xref="CDD:440547" gene 1518914..1519546 /locus_tag="PA1397" /db_xref="GeneID:879330" CDS 1518914..1519546 /locus_tag="PA1397" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_250088.1" /db_xref="GeneID:879330" /translation="MTGRIIVADDHPLFREGMLSILQRLLPEARIEEAGDLAGVLRLA DEGEQPDSLILDLRFPGLTRIEMLADLRRRFPRTTLIVVSMVDDPQLIGEVMNAGADG FLGKSIAPEELGQAILAIRAGEVLVRYEPSGLLPLQPSPRLEGLTERQLDVLRLLAQG KSNKEIGRALDISHYTVRIHVSSLLRALDVPSRTAAAVKYRALLGQGDAE" misc_feature 1518923..1519507 /locus_tag="PA1397" /note="transcriptional regulator NarL; Provisional; Region: PRK10651" /db_xref="CDD:182619" gene 1519627..1519968 /locus_tag="PA1398" /db_xref="GeneID:879290" CDS 1519627..1519968 /locus_tag="PA1398" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250089.1" /db_xref="GeneID:879290" /translation="MRSPLATIACACLLLGGCSKSAEDSANPLLGKDAECLELFARSN ALYCDIREDERESQANGTPRRHTDYEVADAAYLLKATGERCAIDTTYVTECSAKAGQW LQKARAKAAKP" gene complement(1519984..1520904) /locus_tag="PA1399" /db_xref="GeneID:879354" CDS complement(1519984..1520904) /locus_tag="PA1399" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250090.1" /db_xref="GeneID:879354" /translation="MNQPHEWSPLSRFDLNLFRVFEVVYRERNLTRAAGLLHLSQSAV SHALARLRDQLGDPLFVRQGRGVAPTPLAERLAPGIHDALAGLHRSMNRCQTFDPRRD ARTFQLNMPEQLEPLVLPAILAHLRQAAPRIEIRCNSLHWADLKAELGAGRIDLAIEI ARPTDAALRRQHLLDDSLCVMAGPGFAGDLSAEEYLAADHVAVTSRRRGICIEDLALG HLGLARQVRQRCQHYLSAALLVAQGGYLLTLTRGYAELINRGLGNRLLPMPLALPAVT LNLYWSHQADDEAGSLWLRGELAELATRLR" misc_feature complement(1520683..1520862) /locus_tag="PA1399" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(1520002..1520592) /locus_tag="PA1399" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold; Region: PBP2_Nitroaromatics_like; cd08417" /db_xref="CDD:176109" misc_feature complement(order(1520074..1520076,1520275..1520277, 1520377..1520379,1520551..1520553,1520563..1520568, 1520572..1520574)) /locus_tag="PA1399" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176109" misc_feature complement(order(1520179..1520181,1520188..1520193, 1520200..1520205,1520212..1520226,1520308..1520310, 1520488..1520490,1520494..1520508,1520512..1520517, 1520524..1520529,1520533..1520538,1520545..1520550, 1520557..1520562,1520569..1520571)) /locus_tag="PA1399" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176109" gene 1521109..1524396 /locus_tag="PA1400" /db_xref="GeneID:879389" CDS 1521109..1524396 /locus_tag="PA1400" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="pyruvate carboxylase" /protein_id="NP_250091.1" /db_xref="GeneID:879389" /translation="MTAPFNALLIANRGEIAIRIARACADLGIRSVAVFAEDDAASLH VRKADVALPLAGRGVAAYLDMDRLVALALEQGCEAIHPGYGFLAENGEFARRCQRAGI HFVGPQAEVLDLFGDKAAARALAERLEVPLVAGINRAVSVEEAEAFLEGLGDGAAVML KALAGGGGRGMRAVEEVAQLADAYRRCRAEAQAAFGRDELYVEQRVARARHIEVQVLG DGSGAVSHLWERDCSLQRRQQKLLEIAPSPDLPEATREALIDCALRMAGAVRYRGIGT FEFLVDDERPGRFYFMEANPRIQVEHTVTEEVTGVDLLHAQLRLAAGMELAALGLERP PAIGGCAVQLRINLETLAADGSARPAVGTIGAYEPPSGPGLRVDGYGYAGYRVSPSYD SLLAKLVVRGADYPAALRRAYRALCEFRLEGVASNLDLLRNLLLHPAVQANRVDTRFV ESHLETLLAPIPASHPRLRAECPLAEDAAPARVEAPLGSLPLSAPSSGVLVALEVADG ERVRAGQRVAILEAMKMEFEVKAPGGGIVRRLAASLGEPLEEGATLLFLEPTEDDDEQ APTEQALDLAHIRADLAEVLERQAALGDERRPQALARRRKTGQRTARENVLDLLDEGS FSEYGGFALAAQRRRRSAEELLELSPADGLVAGTGTVGAASFGVQAARCLVLAYDYTV FAGTQGVMNHKKTDRLLGLAEQWRLPLVLFAEGGGGRPGDTDFVGVAGLDCHTFVGMA RLSGLVPLVGVVSGRCFAGNAALLGCCDVIIATRDATIGMAGPAMIEGGGLGRFAAEE VGPTGVQGPNGVIDVLVEDEAEAVAVARRYLGYFQGPLPDWSCADQRELRHLVPENRL RAYDIRQAIEVLADRGSVLELRRQFAPGLVTALLRIEGRAFGLIANNPGHLGGAIDAA AGDKAARFMQLCDAFDIPIVSLCDTPGFMVGPEAEKQATVRHVSRMFVSAASLTVPFF TVVLRKGYGLGAQAMAAGSFHSPLFTVAWPSGEFGAMGLEGAVRLGFAKELAAEEDPQ RREALFRGMVDKAYRNGKALNMASYLEIDAVIDPAETRAWLLRGLAVAGEPAPRAGRK RPFVDTW" misc_feature 1521118..1522518 /locus_tag="PA1400" /note="Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism]; Region: PccA; COG4770" /db_xref="CDD:443802" misc_feature 1522582..1522779 /locus_tag="PA1400" /note="The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase; Region: biotinyl_domain; cd06850" /db_xref="CDD:133459" misc_feature order(1522648..1522650,1522675..1522683,1522702..1522704) /locus_tag="PA1400" /note="carboxyltransferase (CT) interaction site [active]" /db_xref="CDD:133459" misc_feature 1522678..1522680 /locus_tag="PA1400" /note="biotinylation site [posttranslational modification]; other site" /db_xref="CDD:133459" misc_feature 1522837..1524384 /locus_tag="PA1400" /note="Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism]; Region: MmdA; COG4799" /db_xref="CDD:443827" gene complement(1524424..1524831) /locus_tag="PA1401" /db_xref="GeneID:879374" CDS complement(1524424..1524831) /locus_tag="PA1401" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250092.1" /db_xref="GeneID:879374" /translation="MTRDRLAERYRAYIDCLNRQDWARLGDFVHDRVRYNDVQIGLDG YLRMLEGDFLAIPDLRFEIERLLVDPPGVACRLHFDCTPSGRLFGIPVNGQRVRFAEN VFYEFEDERIAGVWSVIDKAAVAAQVQVAPPSS" misc_feature complement(1524469..1524813) /locus_tag="PA1401" /note="SnoaL-like polyketide cyclase; Region: SnoaL; pfam07366" /db_xref="CDD:399975" gene complement(1524909..1525574) /locus_tag="PA1402" /db_xref="GeneID:879486" CDS complement(1524909..1525574) /locus_tag="PA1402" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250093.1" /db_xref="GeneID:879486" /translation="MNTLTNAPLADLLQRLFAEAEASAPGDSPALADLSEAELKRLMG SKTEYREFYGRLKDLALPVSRETGCLLYMLARSSSARSIVEFGTSFGLSTLHLAAALR DNGGGRLIGSEFEPSKAERARRNLAAGGLLDLVELREGDALQTLAKDLPDSIDLVLLD GAKALYPEVLALLESRLRPGALVIADNAEHSPEYLAHVRSPANGYLSTPFAEDVELSM RLG" misc_feature complement(1524912..1525382) /locus_tag="PA1402" /note="tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; Region: TrmR; COG4122" /db_xref="CDD:443298" gene 1525667..1526299 /locus_tag="PA1403" /db_xref="GeneID:883121" CDS 1525667..1526299 /locus_tag="PA1403" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250094.1" /db_xref="GeneID:883121" /translation="MSDKRNPRISSRKQPQQARSSELVASILEAAVQVLASEGAQRFT TARVAERAGVSIGSLYQYFPNKAAILFRLQSDEWRRTTRLLGEILEDTTRPPLERLRR LVLAFVRSECEEAAIRVALSDAAPLYRDADEAREVKAEGARVFQAFLREALPEVAEAE RSLAGDLLTTTLGAVGKQFSEQPRSEAEIERYAEALADMLCAYLAALGER" misc_feature 1525745..1525885 /locus_tag="PA1403" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:425684" misc_feature 1525949..1526287 /locus_tag="PA1403" /note="Tetracyclin repressor-like, C-terminal domain; Region: TetR_C_18; pfam17923" /db_xref="CDD:436145" gene complement(1526430..1526657) /locus_tag="PA1404" /db_xref="GeneID:883135" CDS complement(1526430..1526657) /locus_tag="PA1404" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250095.1" /db_xref="GeneID:883135" /translation="MSDWAITYSKDEATERQVLPFPHKPSPEEVAEHLLEWAEANLKP GHYSTGKLESDEPAELLLRRFGIVVTGIAEA" gene 1527191..1528783 /locus_tag="PA1405" /db_xref="GeneID:879333" CDS 1527191..1528783 /locus_tag="PA1405" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="helicase" /protein_id="NP_250096.1" /db_xref="GeneID:879333" /translation="MILCRQPLARIFAGAGSGKSTTLVLRVVFMLCHLGVEPQRLTVI SFTNASCAQLREQLLRLLAHWQYPFDAAQARQCVRTFHSALGSLAREVLGNPRWFEQL DDRDPAAEPDNPLAAGRLRPAQQRLLKQAYQQCYAESPAFRAKTHKLLELPPPAEPEE GARRQPKAPLEPFKLAGEFQALPLYEAFHAQAGFAESLGLRVERLDSGKLECGLREKI FVEAMALFWARFQALLREEGLMTFDAAFQQLGERMAGGALAETALAPFTHLLIDEFQD VSPQIVLWLQALHRRLATQGTAPSLMAIGDDWQSIYGWRGSSPELFIDFDRHFPSRGR GRKSALLVLETNYRSVEPIIRDGEKVLAGVRFKQDKTCRAFRPIQPGDHGVKLVQRFD LRAQLPKLLAEIRAQCEHAAARESSERTAVLLLSRRNEPLQAIQAELDRALPVKGMTI HRAKGLQAEVAIVVDDCLPGEKHPLRNALYAASGFFRNSYDQAMEDESLRLAYVAITR GVSRVLWYTRKAQGATALLARR" misc_feature 1527221..>1528528 /locus_tag="PA1405" /note="Superfamily I DNA or RNA helicase [Replication, recombination and repair]; Region: UvrD; COG0210" /db_xref="CDD:439980" misc_feature 1528532..>1528636 /locus_tag="PA1405" /note="UvrD-like helicase C-terminal domain; Region: UvrD_C_2; pfam13538" /db_xref="CDD:463913" gene complement(1528803..1529561) /locus_tag="PA1406" /db_xref="GeneID:879488" CDS complement(1528803..1529561) /locus_tag="PA1406" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250097.1" /db_xref="GeneID:879488" /translation="MDMPDGFIPLPPRVEPQAAFRPLLDDLRRTLARPPFERAVHSIY LYGSVARGEAITGRSDLDLTLVLRDPPSPELAAQLETARLALQARHPEVSKIDFDIGH LDQARDPANRDSWGYWLKHRCRCLWGEDLASALPPLRPAKAIALALNGDYAQVLEDYA RRLESASSEEERRRLQREAAKKLIRSSDILRGETESVWPETLKHYLALFRARHPGQAP ALEYFKAVLDDQVTDPAVFIERLRAFSAWMQRQA" misc_feature complement(<1529322..1529501) /locus_tag="PA1406" /note="Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins; Region: NT_KNTase_like; cd05403" /db_xref="CDD:143393" misc_feature complement(order(1529376..1529378,1529382..1529387, 1529409..1529411,1529418..1529426)) /locus_tag="PA1406" /note="NTP binding site [chemical binding]; other site" /db_xref="CDD:143393" gene complement(1529597..1530538) /locus_tag="PA1407" /db_xref="GeneID:879228" CDS complement(1529597..1530538) /locus_tag="PA1407" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250098.1" /db_xref="GeneID:879228" /translation="MNREALDTLLQHLLAALSPAPAETRRLFHGRGRCWPDLEQLTAD WLQGVLLVTLFKEPQPEELQALRRTLEQLTTAPAWAASQGRHLVLQHRYRPDSACEWL SGEPLETWDIVENGLRFRLDLGRNQNTGLFLDMRLGRRWVQEQAAGRRVLNLFAYTCG FSVAAIAGGASQVVNLDMARGPLNRGRDNHRLNGHDLGRVSFLGHELFKSWGKLRKLG PYDLVIVDPPSFQKGSFVLTQDYRRILRRLPELLVPGGTLLACINDPAIGPDFLLEET AREAPSLHFVERLENPPEFPDVDPAAGLKALLFRNAG" misc_feature complement(1529609..1530466) /locus_tag="PA1407" /note="S-adenosylmethionine-dependent methyltransferase; Region: Methyltrans_SAM; pfam10672" /db_xref="CDD:287624" gene complement(1530605..1533028) /locus_tag="PA1408" /db_xref="GeneID:879328" CDS complement(1530605..1533028) /locus_tag="PA1408" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250099.1" /db_xref="GeneID:879328" /translation="MRRASLHMLLCQFAMALGLLLSLGSEAWAARPAPQAAVDLEAPA ALAEDASLDQLNAQLDLIRQRVTADASDDLLAELRQSALQVQRQADALLALRVADIER LDDQLKVIGPPQPDEAESLAAQRQALTRQKNALLDDERQATQLGQSSRDLAAQIVNLR RSLFNSQISSRAATPFSPSFWSTLIRPTDDDLRRLDKLKAEALVAFDSAIAPGHRWAF AGTLLATVLVWSFGRRLLERMLTWAMIRWLPEGRLRRSALALAVGLATILTIVGAVSL MRWGLESNASLSPDMASLTDQLVSLATFCAFIAGLGRALLMLPRPSWRLPAIPDRIAS ALGPFPAILAVALMLVATEERINNVTGTSLALTVALNGLTALVTALIFAAALLRYHHV RRKHDLERPGGIAGLIPFVASVWIAAILLALFTGYLSLAYFLTGKLLWISVIAATTYL LIAFFGDICETLLSPKHPSGLALANALGLSPRHQAQASTVLAGVGRTLLLLTALLLAF LPVGSSPSELLQGFAQLGESSKTLGNLNIVPQDILVALLLFVGGLFALRIVKRWLSER LLPETNMDAGMRASLVTLVGYLGFVLLAMLVMSTLRINLTSLTWVVSALSVGIGFGLQ AIVQNFISGLILLTERPVKVGDWVSLGGVEGDIRRINVRATEIQMGDRSTVIVPNSQF ISQTVRNVTMGNALGVVGVNLTLPLDTDAMKVRELLLQAFAEHPAILDAPAPSVTFKD LASNGLVLNASGFVNSPRSVAGARSDLLFTILDRLRSEGIALSSPQSLLMIQDGGPAS AAPAPATPD" misc_feature complement(1531691..>1532950) /locus_tag="PA1408" /note="Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]; Region: PksD; COG3321" /db_xref="CDD:442550" misc_feature complement(1532426..1532611) /locus_tag="PA1408" /note="Protein of unknown function (DUF3772); Region: DUF3772; pfam12607" /db_xref="CDD:432664" misc_feature complement(1530647..1531462) /locus_tag="PA1408" /note="Small-conductance mechanosensitive channel MscK [Cell wall/membrane/envelope biogenesis]; Region: MscK; COG3264" /db_xref="CDD:442495" gene 1533238..1534278 /gene="aphA" /locus_tag="PA1409" /db_xref="GeneID:879295" CDS 1533238..1534278 /gene="aphA" /locus_tag="PA1409" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="acetylpolyamine aminohydrolase" /protein_id="NP_250100.1" /db_xref="GeneID:879295" /translation="MLSVYSDDHRLHFGQSELVDGKLQPCFEMPSRADTVLARVKSQN LGEVIAPKDFGREPLLRLHDAAYLDFLQGAWARWTAEGHSGDLVSTTFPGRRLRRDGP IPTALMGELGYYSFDTEAPITAGTWQAIYSSAQVALTAQEHMRQGARSAFALCRPPGH HAGGDFMGGYCFLNNAAIATQAFLDQGARRVAILDVDYHHGNGTQDIFYRRDDVLFAS IHGDPRVEYPYFLGYADERGEGAGEGCNHNYPLAHGSGWDLWSAALDDACVRIAGYAP DALVISLGVDTYKEDPISQFRLDSPDYLRMGERIARLGLPTLFIMEGGYAVEAIGINA VNVLQGYEGAAR" misc_feature 1533247..1534263 /gene="aphA" /locus_tag="PA1409" /note="Histone deacetylase class IIa; Region: HDAC_classII_APAH; cd10001" /db_xref="CDD:212525" misc_feature order(1533715..1533720,1533742..1533747,1533826..1533828, 1533832..1533834,1534093..1534095,1534204..1534206) /gene="aphA" /locus_tag="PA1409" /note="active site" /db_xref="CDD:212525" gene 1534289..1535380 /locus_tag="PA1410" /db_xref="GeneID:879430" CDS 1534289..1535380 /locus_tag="PA1410" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="spermidine/putrescine-binding protein" /protein_id="NP_250101.1" /db_xref="GeneID:879430" /translation="MQSTRKLLAGLALAVSAGLVQAAPEVRIYNWFDYIAPDTLKNFQ AQTGIAPKYDVYDSNEVLEAKLLSGHSGYDLVVPSDSFLPNYLKAEVFQPLDKSKLPN WKNLNPALLKVLAGKDPGNRYVMPYMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKP ENLAKLQQCGVAFLDSPTEVIPEVLHYLGLSPNSHQPEDYRRAEEHLAKLRPYITYFS SSKFVSDLANGNVCVAIAWSGGAMQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIP RDAKNVEQAHAFLDYLLRPEVVAPISDYVAYANPNKAADGLISAELRDNPNVYPPEEV QARLYSVEMLPPKLERLRTRTWSKIKTGK" misc_feature 1534307..1535377 /locus_tag="PA1410" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" misc_feature order(1534379..1534381,1534997..1534999,1535006..1535008, 1535093..1535095,1535099..1535101,1535207..1535209) /locus_tag="PA1410" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270377" misc_feature order(1534412..1534414,1534421..1534426,1535171..1535176) /locus_tag="PA1410" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:270377" gene 1535586..1536497 /locus_tag="PA1411" /db_xref="GeneID:879320" CDS 1535586..1536497 /locus_tag="PA1411" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250102.1" /db_xref="GeneID:879320" /translation="MRKSADAFAFQTMLLLCVIWGIQQVTIKWAATDIAPVMQAAIRS GIAAALVGLLMCWRGGWEGLRQGTLGAGLLTGTLFALEFLFIALGLQYTTASHMSVFL YTAPIFSALGLHFLLPSERLRPLQWLGVAVCFGGIAVAFGGGLSWAEMDGRMLLGDAF GLLAGMSWGATTVAVRGTRLSEAPPSLTLFYQLFVACAGLLLIALFSGQFGEVRWTPV STASVLFQGVVVSFASYFCWFWLLRRYLANNLAIFSFMTPLFGVTFGVLLLGEPLSLN FVAGAALVLAGITLVSGEQWLRRLLRR" misc_feature 1535622..1536482 /locus_tag="PA1411" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene complement(1536457..1537650) /locus_tag="PA1412" /db_xref="GeneID:879323" CDS complement(1536457..1537650) /locus_tag="PA1412" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250103.1" /db_xref="GeneID:879323" /translation="MSRDFLRSPLVGLLACLLALVVAMGVGRFSLTPQLPHLIREGQL DLTGAGLLAAANYLGYLVGALDALFAREARQARLRLLVGLWACFGLTLASVWAEGFWP HALLRFGLGVASAWVLIMVTALSQRLAAESGRARLGALVFAGPGIGVMVTGLLAALGN ALGQDSVFIWKLFADLALVLILMLLPLLPRPAARGAGHDAPATASENAGLGRLTWAYG LVGLGYIIPATFLSQMAAARFHGQWQADLFWPCFGLASATGVVLISLRRQRPDGTRRW LVGALWLQALGVLACLLPGIGGLALGVVLTGLPFLAGMQLVMQYARELAPHTPQRNAG QLTTGFALGQLLGPLLAALSTHFAGGLQPALALAGLGLVFAGLLLRRPHSLSVAAGVA ATARR" misc_feature complement(1536511..1537581) /locus_tag="PA1412" /note="Uncharacterized MFS-type transporter YbfB; Region: MFS_4; pfam06779" /db_xref="CDD:399632" gene 1537755..1538627 /locus_tag="PA1413" /db_xref="GeneID:879272" CDS 1537755..1538627 /locus_tag="PA1413" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250104.1" /db_xref="GeneID:879272" /translation="MEFGQLRIFQAVAEEGSIARAAERLHRVPSNLSTRLRQLEEQLG VDLFLRERQRLQLSPAGKVLLDYAARLFALQEEARAAVQGGEPVGDFALGSMYSTAAI HLPPRLAEYHRRYPAVNLQLQTAPSGELVESLLGGRLDAVLVDGPLDFDGLEGLPMFE ERMVLVTENGHPPVRGPEDVAGSAVIAFRPRCSYRLLLESWFASARVSMGRVMEIESY HSMLACVVAGGGVALMPVSMLQSLPGRESVAVHALAEPFARANTWLVWRKGMVGANLK AWIGLLQGRESALA" misc_feature 1537761..1537940 /locus_tag="PA1413" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 1538025..1538600 /locus_tag="PA1413" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators, YofA and SoxR, contains the type 2 periplasmic binding fold; Region: PBP2_YofA_SoxR_like; cd08442" /db_xref="CDD:176133" misc_feature order(1538067..1538072,1538076..1538081,1538088..1538090, 1538100..1538102,1538106..1538126,1538388..1538405, 1538421..1538426,1538430..1538435) /locus_tag="PA1413" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176133" gene 1538683..1538916 /locus_tag="PA1414" /db_xref="GeneID:879441" CDS 1538683..1538916 /locus_tag="PA1414" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250105.1" /db_xref="GeneID:879441" /translation="MERAESGTPVYSFLGRPDLSGRPILLPLDKGPVMKLWLQNLAWQ LGVALGLIEPPRMQPIPVENDEQRRRLAARQRR" gene complement(1538976..1539704) /locus_tag="PA1415" /db_xref="GeneID:879391" CDS complement(1538976..1539704) /locus_tag="PA1415" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250106.1" /db_xref="GeneID:879391" /translation="MRIVSRDRWFETRHFYNGISLIHEPYVRPFYRCNMWHVQGRERD VLVDSGSGLVSLCEQLPWLTERPLLAVASHTHFDHIAGHHEFAERLAHPAEAEILAAP DGDNTLARAYVGDEMFEAHPECPLCYAEYRVRAAPATRLIDEGDVLDLGDRVLQVLHT PGHSPGGISLWEAATQTLFSGDIVYDGPLVEDAYHSNLDDYASSLARLRELPVRTVHG GHFASFSGERLREMIVAWFRNHDR" misc_feature complement(1539045..1539632) /locus_tag="PA1415" /note="uncharacterized human metallo-beta-lactamase domain-containing protein 2 and related proteins; MBL-fold metallo hydrolase domain; Region: MBLAC2-like_MBL-fold; cd07712" /db_xref="CDD:293798" misc_feature complement(order(1539045..1539047,1539159..1539161, 1539213..1539218,1539468..1539473,1539477..1539479, 1539483..1539485)) /locus_tag="PA1415" /note="putative active site [active]" /db_xref="CDD:293798" gene complement(1539749..1541131) /locus_tag="PA1416" /db_xref="GeneID:881714" CDS complement(1539749..1541131) /locus_tag="PA1416" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250107.1" /db_xref="GeneID:881714" /translation="MDDSELYRSLCEILGARGVRDSAALAGQDPGYHPQNLAGSFLVL PESTDQVAAVVRLCRQAGRALVPQGGLTGLVGGGAAQAGDVLLSLRRLNRIHRLDAAS QTLDLDAGVTLEQAQALAAEAGLDPGIDLAARGSASVGGLVATNAGGIRAFRFGTMRQ RVLGLEAVLADGSVYSDLRGLLKNTTGYDLKQLFVGAEGTLGIVTRAVLRLEPLQRPG ATALLGLPDVDAAITIAARLRREHAERLFACEILWHDYLQCTAAPMGDSAPSLAPCPL YLLVELAEDRHLDAGEALTALLEDCFEDGLVEDALLAANETQRLAIWRLREDSDAAIH AGVDSLSFDVSLPVPALAGYVERIRRRLDDLVKGMQVFLFGHFLDGNLHVMLAADVPL LPLHQAVEEILYGELGECAGVISAEHGIGLEKKEALGRYADPLKLALMAQIKELLDPS GLFNPGKVIP" misc_feature complement(1539752..1541131) /locus_tag="PA1416" /note="FAD/FMN-containing lactate dehydrogenase/glycolate oxidase [Energy production and conversion]; Region: GlcD; COG0277" /db_xref="CDD:440046" gene complement(1541145..1542746) /locus_tag="PA1417" /db_xref="GeneID:881729" CDS complement(1541145..1542746) /locus_tag="PA1417" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250108.1" /db_xref="GeneID:881729" /translation="MTTCGEFLVKQLEAWGVETVFGIPGVHTVELYRGLPGSRIRHVT PRHEQGAGFMADGYARVTGKPGVCFIITGPGMTNILTAMAQAYADSIPMLVISSVNER ARLAHGNGYLHELPNQRNLVGNVCAFSHTLMSAEELPAVLARAFAVFDSERPRPVHIE LPLDVITAPAEHLALRPRTVTSRPAPALAPLREAAARLRNAKKPLLLLGGGCVEAAAE ARALAAALDAPTALTINAKGLLPADHPLLLGSNQSCVPVRELATEADVVLAIGTELGE TDYDVVFDGGFALDGELIRIDIDPQQLMRNYTPSLAIHSDARLAMRVLLAELPGGEAS PDSPGARRAAAVRQRLAEDFAGWSHYRQLFAAILAEWPDARFVGDSTQTVYSGNHLVD LDEPRRWFNASTGYGTLGYGLPAAIGAKLGEPGRPVVSLMGDGGLQFTLPELASAVEA KVGIVVLLWNNHGYGEIKRYMERREITPLGVDIYTPDFLAIARGFGCAAERARDLEHL RELLRGAPADRPLIVEVLQAAPFHP" misc_feature complement(1541148..1542746) /locus_tag="PA1417" /note="5-guanidino-2-oxopentanoate decarboxylase; Region: PRK07524" /db_xref="CDD:236041" gene complement(1542822..1544213) /locus_tag="PA1418" /db_xref="GeneID:881711" CDS complement(1542822..1544213) /locus_tag="PA1418" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sodium:solute symport protein" /protein_id="NP_250109.1" /db_xref="GeneID:881711" /translation="MALDIFVVLIYAAGMIALGWYGMRRAKTRDDYLVAGRNLGPGFY LGTMAATVLGGASTIGTVRLGYVHGISGFWLCGAIGLGIVGLSLFLAKPLLKLKIYTV TQVLERRYNPAARHASALIMLVYALMIGATSTIAIGTVMQVLFGLPFWVSILIGGGVV VLYSTIGGMWSLTLTDIVQFLIMTVGLVFLLMPLSINDAGGWDALVAKLPASYFDFTA IGWDTIVTYFLIYFFGIFIGQDIWQRVFTARSETVAKVAGSAAGIYCVLYGMAGALIG MAAKVLLPDLENVNNAFASVVEHSLPNGIRGLVIAAALAALMSTASAGLLAASTTVTQ DLLPRLRRGRGQSDNGDVHENRIATLLLGLVVLGIALVVSDVISALTVAYNLLVGGML IPLIGAIYWKRATTAGAITSMTLGFLTVLVFMIKDGLDANTPIYYSLAVGLLSFVLVS LFSRRPTGVASAA" misc_feature complement(1542843..1544207) /locus_tag="PA1418" /note="Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain; Region: SLC5sbd_u3; cd11479" /db_xref="CDD:271373" misc_feature complement(order(1543254..1543259,1543266..1543268, 1544055..1544057,1544064..1544066)) /locus_tag="PA1418" /note="Na binding site [ion binding]; other site" /db_xref="CDD:271373" gene complement(1544307..1545818) /locus_tag="PA1419" /db_xref="GeneID:881764" CDS complement(1544307..1545818) /locus_tag="PA1419" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_250110.1" /db_xref="GeneID:881764" /translation="MDNNNNQHAITRIETFGVEQIPDHERNATPVDLFRMIFGGANTF ATAVLGSFPVLFGLSFQAGLWAILLGVTLGALILAPMGLFGPLNGTNNAVSSGAHFGV HGRIVGSFLSLLTAIAFFSLSVWSSGDALVGGARRLVGLEESELNLGLAYGLFAVLVL TVCIYGFRFMLLVNRIAVWAASLLFLLGLFAFAGPFDAAYAGSVQLGQPGFWAAFIGA TLLAMSNPISFGAFLGDWARYIPRQTSQARIMLAVIGAQLATLVPFLFGLATATIVAV RAPDYIAANNYVGGLLAIAPGWFFLPVCLIAVIGGMSTGTTSLYGTGLDMSSVFPRLL SRVQATVLIGVASIGFIFVGRFAFNLVQSVSTFAVLIVTCTTPWMVIMLIGLLTRRGF YRPDDLQVFTRGQRGGAYWFEHGWNWRGMGAWIPSAAAGLAFVNLPGQFVGPLGELAG GIDLSLPVALGLAALLYLALLRLFPEPPCVYGPRGPRWVRAHGTRRAPAIATA" misc_feature complement(1544472..1545815) /locus_tag="PA1419" /note="Purine-cytosine permease or related protein [Nucleotide transport and metabolism]; Region: CodB; COG1457" /db_xref="CDD:441066" gene complement(1545837..1546256) /locus_tag="PA1420" /db_xref="GeneID:881752" CDS complement(1545837..1546256) /locus_tag="PA1420" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250111.1" /db_xref="GeneID:881752" /translation="MTDDRVEQVLEAARRLVAAFARNDAEAYFAAFSEDASFIFHNWP QPLRSRAAYRKLWERWRREDGFEVLACESSNTCVSLQGDLAIFSHDVATRLRLQGTES LNRERETILFRLEQQEGRWLACHEHLSAMPEYLPSTS" misc_feature complement(1545861..1546253) /locus_tag="PA1420" /note="Ketosteroid isomerase homolog YybH [General function prediction only]; Region: YybH; COG4319" /db_xref="CDD:443460" gene complement(1546271..1547230) /gene="gbuA" /locus_tag="PA1421" /db_xref="GeneID:881747" CDS complement(1546271..1547230) /gene="gbuA" /locus_tag="PA1421" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="guanidinobutyrase" /protein_id="NP_250112.1" /db_xref="GeneID:881747" /translation="MDKNLHQPLGGNEMPRFGGIATMMRLPHVQSPAELDALDAAFVG VPLDIGTSLRSGTRFGPREIRAESVMIRPYNMATGAAPFDSLNVADIGDVAINTFNLL EAVRIIEQEYDRILGHGILPLTLGGDHTITLPILRAIKKKHGKVGLVHVDAHADVNDH MFGEKIAHGTTFRRAVEEDLLDCDRVVQIGLRAQGYTAEDFNWSRKQGFRVVQAEECW HKSLEPLMAEVREKVGGGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQAMEIIRGCQ GLDLIGCDLVEVSPPYDTTGNTSLLGANLLYEMLCVLPGVVRR" misc_feature complement(1546301..1547176) /gene="gbuA" /locus_tag="PA1421" /note="Agmatinase-like family includes proclavaminic acid amidinohydrolase; Region: Agmatinase_PAH; cd11592" /db_xref="CDD:212538" misc_feature complement(order(1546307..1546309,1546319..1546321, 1546328..1546333,1546340..1546342,1546433..1546438, 1546448..1546450,1546460..1546462,1546472..1546474, 1546949..1546954,1546961..1546963,1547036..1547038, 1547045..1547047,1547054..1547059,1547084..1547086, 1547093..1547095)) /gene="gbuA" /locus_tag="PA1421" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:212538" misc_feature complement(order(1546370..1546372,1546496..1546498, 1546502..1546504,1546724..1546729,1546763..1546771, 1546775..1546777,1546844..1546846)) /gene="gbuA" /locus_tag="PA1421" /note="putative active site [active]" /db_xref="CDD:212538" gene 1547437..1548330 /gene="gbuR" /locus_tag="PA1422" /db_xref="GeneID:881769" CDS 1547437..1548330 /gene="gbuR" /locus_tag="PA1422" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="protein GbuR" /protein_id="NP_250113.1" /db_xref="GeneID:881769" /translation="MSNALPDLRLLRIFAAVVRHQGFAAAQQELNLSTSAISTYMSQL ENQLGIVLCHRGRGGFSLTSKGELFHQETLRILGELEGFERYALALKGELRGTLNLGV LDSTVSDPALPLAEVIGAFSREHPAVHLHLLVQSPYELQLSVLENRQDLAIGAFSSRM NGLVYQPLYREQHWLYCSDRHPLFDGRRIPADLITQQRMVGRGYWSQAELARHGFKHS AGTVESMEAQLILILSGGYIGYLPEHYAHPWVEQGRLRALLPATFGYQAPFSLILRRG RSREPLIQAFRDQLRTQMSLA" misc_feature 1547455..1548318 /gene="gbuR" /locus_tag="PA1422" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene complement(1548334..1549587) /gene="bdlA" /locus_tag="PA1423" /db_xref="GeneID:881734" CDS complement(1548334..1549587) /gene="bdlA" /locus_tag="PA1423" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="biofilm dispersion protein" /protein_id="NP_250114.1" /db_xref="GeneID:881734" /translation="MAALDRSMARVEFDPDGNITDANENFLTLLGYRRDEILGKPHRQ LCDGAYAQSEDYRRFWERLRRGEHFSGRCKRITREGRPLWLEATYNPVRDGQGRLLKV VKYASDIDAIVHQEHEMQSKLDALSRSMAMIEFDLDGNVLAANDNFLATMGYGRAELA SANHRQFCEPGYRDGPQYADLWRRLNRGEYVTGQFRRVHRNGQPVWLEASYNPVYDAD GKLYKVVKFASDVSDRMRRYQAEADNAHQAHTLSTETRTVAEHGALIIQSAVEEMLKI ANTLDASSLNIGELSQHSQQITSIVNTIREIAEQTNLLALNAAIEAARAGDQGRGFAV VADEVRQLAERTSKSTKEIADMIGRIQTGTRSVIDDMQHSQEQARRGVELANEAGAAI LGIRESTHKVVEAVQQFSRTLNADL" misc_feature complement(1548868..1549557) /gene="bdlA" /locus_tag="PA1423" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature complement(1548352..>1548864) /gene="bdlA" /locus_tag="PA1423" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene 1549883..1550494 /locus_tag="PA1424" /db_xref="GeneID:881772" CDS 1549883..1550494 /locus_tag="PA1424" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250115.1" /db_xref="GeneID:881772" /translation="MPRIRCERCARPASHCLCALIPSLPSRTRVLVLQHPSEVGHALN TAGLAVLGLCNAELRVGERFAEETWRVPGYRACLLFPGEQARALAEMAAEAAGEPLLL VVPDGTWRKARKLLHLNPALAALPRVSLAEGMASRYRLRKAPGEGALSTIEAIAAALD ELEAPRTHEALLKPFDALIEGQIAAMGEDTYRRNHLSQERRRR" misc_feature 1549883..1550482 /locus_tag="PA1424" /note="tRNA U47 aminocarboxypropyltransferaseTapT/TuaA/ YfiP, DTW domain [Translation, ribosomal structure and biogenesis]; Region: TapT; COG3148" /db_xref="CDD:442382" gene complement(1550452..1550787) /locus_tag="PA1424a" /db_xref="GeneID:17373350" CDS complement(1550452..1550787) /locus_tag="PA1424a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719742.1" /db_xref="GeneID:17373350" /translation="MARPRISELFEQEPSRWGGRGDPYLWQEMAGQLADASWPASAAA LEHLLGETFERLSGHSLEYDALIYLARHAHGGMSSGMVSPEFWRETAIPELLDRYRRR RSWLRWLRR" gene 1550984..1552600 /locus_tag="PA1425" /db_xref="GeneID:881746" CDS 1550984..1552600 /locus_tag="PA1425" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_250116.1" /db_xref="GeneID:881746" /translation="MTNTSTLTLDGVSFQLPDGSLLFSDLDETFDTRHTGLVGRNGVG KSLLARLLAGHLQPSSGSVRRQGRVRYLAQQLEPADYPTVADLAGVRPWLEALARIEA GSLDAADYECLGERWDIRQRLADALAAEGLGHLRADTPSERLSGGECMRVALLGAFLD DADFLILDEPSNPLDGPARALLRARLAAWDGGLLLVSHDRELLEGMQRIVELSTLGLR SYGGGYSFYAQSREEAREAAERRLDQRRLERKRQTLAMREQQQRQERCQASGRREGKT ANQAKILLGGFRERSEVSAGKLRNAHQAERERLDREVREAAREVEEASPLLLDSPDAE LAAQRRIVELKGAVLPHLRGPLREIDLLLSGPRRLALVGPNGSGKSTLLRLLAGQRAP LAGTCAVTVGAAYLDQRLSVLDHGRGVLEQLLEVNRSRGESWLRTRLAQLGLPAERLA QPCATLSGGERLKAALALVLYADRPAQLLLLDEPDNHLDLAARQALESMLGQYRGALL VVSHDPVFLRHLALDGELRATAAGWRLEDR" misc_feature 1551008..1552546 /locus_tag="PA1425" /note="ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]; Region: Uup; COG0488" /db_xref="CDD:440254" gene complement(1552566..1554155) /locus_tag="PA1428a" /db_xref="GeneID:17373351" CDS complement(1552566..1554155) /locus_tag="PA1428a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719743.1" /db_xref="GeneID:17373351" /translation="MPNSPLPSGRRLPACAFADIGEPYAVFQAPGGALLAVASAFHGQ HPGRQLDVYEQSLRLYRGGDLECIAVLPDLGFPLNAIAWHPSRPVLVIGGGRYDGGAF FEGGLLAWDYASGKTQSLVADNREVLACDFEDDGRRLTFTVAPSDDLEDRPLFRQRHS LAFPVDAPLVLDDLPGTRLPFDWALYPASTQREAALPILENLALGKDRRFLHRPPVWD LCFLDGQRLAIARANPRLELWNLADDSLRSFELAERGQCLQVFHNATDDSLLVNLQLG YAAQRLFKVPLTPGQPLLLSDCRHLLAQSAQGGFLARQIALEGKDLEDLVLDPAGRII HRRRLGHYDLFNHHLRIDRGEAFFYLAGNPPEQHQDKGLFRLDPQTFKTREVLRLERH PEHFNNLHGCLLGNRLLLNAKVYNSPHHAYGTQRLTCYDLESRGTLWGATLSAQVSAF APLPGGQWIALALVDGQVEVRDLASGECRWRYRTADAIPLCLAVSDKLLAIGFSHGGV SLLQVAADGQLIGPPGANPRQ" misc_feature complement(1553427..>1554068) /locus_tag="PA1428a" /note="WD40 repeat [General function prediction only]; Region: WD40; COG2319" /db_xref="CDD:441893" misc_feature complement(<1552596..1552880) /locus_tag="PA1428a" /note="PQQ-like domain; Region: PQQ_2; pfam13360" /db_xref="CDD:433144" gene 1554415..1554846 /locus_tag="PA1428" /db_xref="GeneID:881799" CDS 1554415..1554846 /locus_tag="PA1428" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250119.1" /db_xref="GeneID:881799" /translation="MHIRKRVDADNTALVDLWERSVRATHDFLSEADIVELYPQVRDL YLPAVEVWVLVDDDGVAQGFIGLNQAHVEMLFVEPGLRGRGIGRRLLDHARATWPRLS VDVNEQNPQACGFYRHYGFRQTGRSATDSAGRPFPLLHMSL" misc_feature 1554421..1554840 /locus_tag="PA1428" /note="NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, from bacterial antibiotic resistance to circadian rhythms in mammals. Members...; Region: N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate; cl17182" /db_xref="CDD:473072" gene 1555012..1557720 /locus_tag="PA1429" /db_xref="GeneID:881803" CDS 1555012..1557720 /locus_tag="PA1429" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cation-transporting P-type ATPase" /protein_id="NP_250120.1" /db_xref="GeneID:881803" /translation="MNGIPPLSSRDAHASPPQRVLERLHSSAAGLDADEAARRLAAHG YNRLPAPKRQGPLLRLLRQFHNVLLYMMLFASLVTALLGFWVDSAVILLAVVVNALIG FVQEGKAANALDAIRDMLSLHALVLRDGQRQALDAERLVPGDVVLLASGDRVPADLRL FETKNFHVDESALTGESVPVEKGCVAVAIDALLGDRRCMAYSGTLVTSGQARGVVVAT AGDTELGRIGTLLREVRTLATPLLRQIASFSRWLALAILLLAGATFVLGTLWQGQPMV DMFMLVVALTASAIPEGLPAIMTVILALGVQRMARRNAIVSRLPAVETLGSVTVICSD KTGTLTRNEMTVQRIVTADQVIEVSGAGYAPLGGFSHNGEGLDPAGRDDLQEIGRAAL LCNEARLHQEGEAWQLEGDPTEGALLSLGLKLGLDPQALAAERPRSDAIPFESEHRFM ATLHHDHAGQAMVYLKGAPERILDMCEAERVGDSVRPLDPDYWRRLATDTAARGLRLL AIARRAMPAEQRTLDFADVEHGFTLLALVGIIDPPREEAVAAVAECQAAGIAVKMITG DHVDTARAIGAMLGIGIDRPALTGAEIELLDDQRLREVLPGVDVFARASPEHKLRLVQ ALQASGEVVAMTGDGVNDAPALKRADVGVAMGNKGTEAAKEAAEVVLADDNFATIANA VREGRAVYDNLKKFILFMLPTNGGEALIVIAAILFQLTLPMTPAQILWINMVTSSTLG LALAFDPAERGLMQRPPRPPAEPLLSLFFVWRVLLVSLLMMAGALGLFLWELEHGTGL ESARTMAVNSVVVCEMFYLLNSRHIYDSVLSREGLFGNRQVLLAIAACVMLQLLYTYA PPLQALFGSVGLAPGEWARVLLAGLGLFCVAELEKWLCRRVRARQA" misc_feature 1555099..1557684 /locus_tag="PA1429" /note="P-type cation-transporting ATPase similar to Exiguobacterium aurantiacum Mna, an Na(+)-ATPase, and Synechocystis sp. PCC 6803 PMA1, a putative Ca(2+)-ATPase; Region: P-type_ATPase_cation; cd02080" /db_xref="CDD:319775" misc_feature order(1556011..1556019,1556338..1556340,1556407..1556415, 1556533..1556535,1556704..1556712,1556848..1556850, 1556857..1556859,1556866..1556868,1556923..1556925, 1556932..1556934) /locus_tag="PA1429" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:319775" misc_feature order(1557106..1557108,1557118..1557123,1557127..1557132, 1557205..1557207,1557214..1557219) /locus_tag="PA1429" /note="putative cation binding site [ion binding]; other site" /db_xref="CDD:319775" protein_bind 1557882..1557903 /experiment="Beta-gal reporter assay [PMID: 9190808]" /experiment="EMSA [PMID: 9190808]" /experiment="Site directed mutagenesis [PMID: 9190808]" /note="Transcription factor binding site for NP_249343.; Evidence of regulation for: PA1430" /bound_moiety="Vfr" protein_bind 1558120..1558133 /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" protein_bind 1558140..1558153 /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" gene 1558171..1558890 /gene="lasR" /locus_tag="PA1430" /db_xref="GeneID:881789" CDS 1558171..1558890 /gene="lasR" /locus_tag="PA1430" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator LasR" /protein_id="NP_250121.1" /db_xref="GeneID:881789" /translation="MALVDGFLELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDS QDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFF EEASAAGLVYGLTMPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQ SGAGLAFEHPVSKPVVLTSREKEVLQWCAIGKTSWEISVICNCSEANVNFHMGNIRRK FGVTSRRVAAIMAVNLGLITL" misc_feature 1558222..1558653 /gene="lasR" /locus_tag="PA1430" /note="Autoinducer binding domain; Region: Autoind_bind; pfam03472" /db_xref="CDD:427319" misc_feature 1558693..1558863 /gene="lasR" /locus_tag="PA1430" /note="Bacterial regulatory proteins, luxR family; Region: GerE; pfam00196" /db_xref="CDD:425517" misc_feature order(1558702..1558710,1558747..1558755,1558777..1558782, 1558786..1558791,1558795..1558809,1558840..1558842) /gene="lasR" /locus_tag="PA1430" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:99777" misc_feature order(1558735..1558737,1558741..1558743,1558747..1558749, 1558840..1558848,1558855..1558857,1558864..1558869) /gene="lasR" /locus_tag="PA1430" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:99777" gene complement(1558880..1559122) /gene="rsaL" /locus_tag="PA1431" /db_xref="GeneID:881782" CDS complement(1558880..1559122) /gene="rsaL" /locus_tag="PA1431" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="regulatory protein RsaL" /protein_id="NP_250122.1" /db_xref="GeneID:881782" /translation="MASHERTQPQNMAFRAKATRTARRESQETFWSRFGISQSCGSRF ENGENLPFPIYLLLHFYIEGQITDRQLADLRGKIRE" protein_bind complement(1559178..1559199) /experiment="'DNAse footprinting [PMID: 15505212, 18045385]'" /experiment="'EMSA [PMID: 19682264, 15505212, 18045385]'" /experiment="ChIP-chip [PMID: 19682264]" /experiment="ChIP-PCR [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA1431, PA1432'" /bound_moiety="LasR" protein_bind 1559206..1559220 /experiment="'Beta-gal reporter assay [PMID: 17172347, 18045385]'" /experiment="'EMSA [PMID: 17172347, 18045385]'" /experiment="DNAse footprinting [PMID: 18045385]" /experiment="Site directed mutagenesis [PMID: 17172347]" /experiment="Western blot (quantitative) expression analysis [PMID: 17172347]" /note="Transcription factor binding site for NP_250122.; Evidence of regulation for: PA1432" /bound_moiety="RsaL" gene 1559254..1559859 /gene="lasI" /locus_tag="PA1432" /db_xref="GeneID:881777" CDS 1559254..1559859 /gene="lasI" /locus_tag="PA1432" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="acyl-homoserine-lactone synthase" /protein_id="NP_250123.1" /db_xref="GeneID:881777" /translation="MIVQIGRREEFDKKLLGEMHKLRAQVFKERKGWDVSVIDEMEID GYDALSPYYMLIQEDTPEAQVFGCWRILDTTGPYMLKNTFPELLHGKEAPCSPHIWEL SRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDIQTLVTVTTVGVEKMMIRAGLDVS RFGPHLKIGIERAVALRIELNAKTQIALYGGVLVEQRLAVS" misc_feature 1559254..1559850 /gene="lasI" /locus_tag="PA1432" /note="N-acyl-homoserine lactone synthase LasI (autoinducer biosynthesis) [Signal transduction mechanisms]; Region: LasI; COG3916" /db_xref="CDD:443121" gene complement(1559966..1561918) /locus_tag="PA1433" /db_xref="GeneID:881820" CDS complement(1559966..1561918) /locus_tag="PA1433" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250124.1" /db_xref="GeneID:881820" /translation="MSLLKQLFLAICLFLVVAFSGSFVSSVENSREQLRGQLRSHAQD AATALGLSLTPHVDDPAMVQLMVSSIFDSGYFASIRVIDIKSGKPLVERVQAHAERTV PGWFERLVDLQPQGGDALIMRGWEQAARVEVVSHPQFALARLWDSALGSLYWLLACGA ASLLLGGWLLRRQLRPLDQMVRQAHAISRREFLSLPRLPRTPELRRVVQAMNQMVEKL RTLFAEEAARSDKLRAQAYQDSLTGLPNRRLFDARLNEQLGAGEHEHAGQLLLLRLND LNGLNQRLGGQRTDELIQAVARLLVDSCGQQGRADWLLARSRGGEFAVLAPGCSREQA ERLAEELCEGLENLARTGASDLTPVAYLGISAFAEGDSPADLLARADQALAQAESQPA QPWASQDGTALAALNDSQDWHDWIDQALTERRLLLYFQPVVDCLDTQRVLHHKVLARL LDPQATAIAAGRFLPWIERFGWAARMDLAMLEQSLEHLRRHPRPLALSLSAASVRNAQ TFAPLLALLKAHPQEARQLTLELDERHLPAAAELERLSQVLRELGCGLGLQHFGGRFS LIGNLTHLGLAYLKLDGCYLHAVDREGDKRLFIEAVYRTTHSIDLPLIAEQVETLGEL EVLREMGLRGAMGRLFGSPAPWSGDA" misc_feature complement(1561484..1561852) /locus_tag="PA1433" /note="LapD/MoxY periplasmic domain; Region: LapD_MoxY_N; pfam16448" /db_xref="CDD:465117" misc_feature complement(1559984..1561651) /locus_tag="PA1433" /note="EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) [Signal transduction mechanisms]; Region: EAL; COG2200" /db_xref="CDD:441802" protein_bind complement(1561684..1561696) /locus_tag="PA1433" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(1561919..1562632) /locus_tag="PA1434" /db_xref="GeneID:881786" CDS complement(1561919..1562632) /locus_tag="PA1434" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250125.1" /db_xref="GeneID:881786" /translation="MSPTPGARRPCPRAYAPWLLSLAATLLLAVGAALAQWDLESILS RAEQRYGELGAAKSRLGDWGRLLEQGGTLDEAAKLRAVNDFFNRSLRFTDDIEIWQQE DYWATPVEALVKGAADCEDYAIAKYVTLRRLGVASDKLRITYVKALRLNQAHMVLTWY ASPGADPLVLDNLIGEIRPASQRDDLLPVYAFNAEGLWLPGADGGRRTGDSKKLSRWQ DLLTKMRAEGLDLDAPKED" misc_feature complement(1561985..1562521) /locus_tag="PA1434" /note="Predicted transglutaminase-like protein [Posttranslational modification, protein turnover, chaperones]; Region: COG3672" /db_xref="CDD:442889" gene 1562813..1563970 /locus_tag="PA1435" /db_xref="GeneID:881806" CDS 1562813..1563970 /locus_tag="PA1435" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux membrane fusion protein" /protein_id="NP_250126.1" /db_xref="GeneID:881806" /translation="MQALRSGGGRVLVGVLAAGLVAFGGWAWLGGDAGAKAAPAPARV PVIVARVERRDVEQQVSGIGTVTSLHNVVIRTQIDGQLTRLLVSEGQMVEAGELLATI DDRAVVAALEQAQASRASNQAQLKSAEQDLQRYRSLYAERAVSRQLLDQQQATVDQLR ATLKANDATINAERVRLSYTRITSPVSGKVGIRNVDVGNLVRVGDSLGLFSVTQIAPI SVVFSLQQEQLLQLQALLGGEAAVRAYSRDGGSALGEGRLLTIDNQIDSSTGTIRVRA SFDNRQARLWPGQFVAVSLHTGVRRDQLVLSSKAVRRGLEGNFVYRVADDRVEAVPVR VLQDIDGLSVVEGLASGDQVVVDGHSRLMPGALVDIQEPRPSLAQATERRP" misc_feature 1562945..1563952 /locus_tag="PA1435" /note="MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit; Region: PRK11556" /db_xref="CDD:183194" gene 1563967..1567077 /locus_tag="PA1436" /db_xref="GeneID:881815" CDS 1563967..1567077 /locus_tag="PA1436" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux transporter" /protein_id="NP_250127.1" /db_xref="GeneID:881815" /translation="MTPRAGISGWCVRHPIATALLTLASLLLGLLAFLRLGVAPLPEA DFPTIQINALLPGGSPETMASSVATPLEVQFSAIPGITEMTSSSALGTTTLTLQFSLD KSIDVAAQEVQAAINAAAGRLPVDMPNLPTWRKVNPADSPIMILRVNSEMMPLIELSD YAETILARQLSQVNGVGQIFVVGQQRPAIRIQAQPEKLAAYQLTLADLRQSLQSASVN LAKGALYGEGRVSTLAANDQLFNASDYDDLVVAYRQGAPVFLKDVARIVSAPEDDYVQ AWPNGVPGVALVILRQPGANIVDTADAIQAALPRLREMLPATIEVDVLNDRTRTIRSS LHEVELTLLLTIGLVVLVMGLFLRQLSATLIVATVLAVSLSASFAAMYVLGFTLNNLT LVALIIAVGFIVDDAIVVVENIHRHLEAGASKVEAALKGAAEIGFTVISISFSLIAAF IPLLFMGGIVGRLFREFAVSVTVAILISVVASLTLAPMLASRFMPALRHAEAPRKGFA EWLTGGYERGLRWALGHQRLMLVGFAFTVLVAVAGYVGIPKGFFPLQDTAFVFGTSQA AEDISYDDMVAKHRQLAEIIASDPAVQSYNHAVGVTGGSQSLANGRFWIVLKDRGERD VSVGEFIDRLRPQLAKVPGIMLYLRAAQDINLSSGPSRTQYQYALRSSDSTQLALWAQ RLTERLKQVPGLMDVSNDLQVGASVTALDIDRVAAARFGLSAEDVSQTLYDAFGQRQV GEYQTEVNQYKVVLELDARQRGRAESLDWFYLRSPLSGEMVPLSAIAKVAAPRSGPLQ INHNGMFPAVNLSFNLAAGVSLGEAVQAVQRAQEEIGMPSTIIGVFQGAAQAFQSSLA SQPLLILAALIAVYIILGVLYESFVHPLTILSTLPSAGIGAVFLLWAWGQDFSIMALI GIVLLIGIVKKNGILMVDFAIVAQREQGMSAEQAIYQACLTRFRPIMMTTLAALLGAI PLMIGFGTGSELRQPLGIAVVGGLLVSQVLTLFSTPVVYLALERLFHRRGTTTSDGGT AGATAT" misc_feature 1563988..1567014 /locus_tag="PA1436" /note="multidrug efflux RND transporter permease subunit; Region: RND_permease_2; NF033617" /db_xref="CDD:411236" gene 1567181..1567870 /locus_tag="PA1437" /db_xref="GeneID:881849" CDS 1567181..1567870 /locus_tag="PA1437" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_250128.1" /db_xref="GeneID:881849" /translation="MRVLIVEDEAKTADYLNRGLSEQGFTVDLADNGIDGRHLALHGE YDVIVLDVMLPGVDGYGVLRALRERRQTPVIMLTARERVEDRVRGLREGADDYLIKPF SFLELVARLQALTRRGGNHESHSQMRIADLSIDLLSRKVFRGNTRLELTAKEYALLCV LAQRSGEILSKTAIAELVWDINFDTDTNVVEVAIKRLRAKLDGPFENKLLHTIRGMGY VLENRALAESG" misc_feature 1567187..1567840 /locus_tag="PA1437" /note="heavy metal response regulator; Region: cztR_silR_copR; TIGR01387" /db_xref="CDD:130454" gene 1567848..1569293 /locus_tag="PA1438" /db_xref="GeneID:881858" CDS 1567848..1569293 /locus_tag="PA1438" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_250129.1" /db_xref="GeneID:881858" /translation="MRWRSRAEVGMSLSTRLAGMFAGAAVVIFALIGTMLYCILDRQT ERLQQGEVDVRFNMVSRMLDHPDLAERWPHLQGKLDNLSQEYELIRFWIDSDDPRYHY GRFSEPVQRLIADGAGRYELELPEHRYALTARVGVLPAREGRPRLTYVTAIDSAAFHE ARTSTLKWLLGLSALGVLLASLLGHWIARLGLWPVHRLSEEARRISPRQLSQRLQLSP LPAELRELVGAFNGALDRLEQAYVRLESFNADVAHELRTPLTNLIGQTQVALSRERSG EHYEEVLQSNLEELERLRAIVNDMLFLARADQGRLACEREETSLAGEIATTVDFLEVI FDEAGVGIEVRGEARALVERALFQRAVTNLLYNAAQHTAAGGTLRVGVERRGDEVRVA VSNPGVPIADEHRRHLFERFYRVDAARSNSEANHGLGLSIVKAVASMHGGSVFVDSAD GWNTFGFTVLSPERRGPGDRLPLGEGDPALS" misc_feature 1567875..1569227 /locus_tag="PA1438" /note="heavy metal sensor kinase; Region: cztS_silS_copS; TIGR01386" /db_xref="CDD:273593" gene complement(1569302..1569709) /locus_tag="PA1439" /db_xref="GeneID:881838" CDS complement(1569302..1569709) /locus_tag="PA1439" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250130.1" /db_xref="GeneID:881838" /translation="MAQREIRPSARAWVRYSLQAVGFLSVALGVIGIFLPVLPTTPFL LLAAACFMRSSPRFYHWLVGHPRLGPWIRDYLDGEGIPLKGKVYAIGLMWASIALSCY LVRRPWAQGFMLTSAVLVSIYILRQKTRPPHDA" misc_feature complement(1569308..1569679) /locus_tag="PA1439" /note="Uncharacterized membrane protein YbaN, DUF454 family [Function unknown]; Region: YbaN; COG2832" /db_xref="CDD:442080" gene complement(1569721..1570308) /locus_tag="PA1440" /db_xref="GeneID:881829" CDS complement(1569721..1570308) /locus_tag="PA1440" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250131.1" /db_xref="GeneID:881829" /translation="MSFAEKLSRLQAFLDADDLHEEALDYVATHGYLTALSICPEQVP EREWIDALFAEPPHYRSDEERQEIETSLEQLKAHITRVLASDEDLELPCDLDLGDEPD DSDLRGWCIGFMEGVFLREEVWFEQAEEEVSELLLPIMVGSGLFDEQPEFDEIARDRH LVDDMVAQIPDLLTNLFLLCQAPEEKPALLKPRTH" misc_feature complement(1569853..1570290) /locus_tag="PA1440" /note="Uncharacterized protein family (UPF0149); Region: UPF0149; cl01173" /db_xref="CDD:445302" gene 1570496..1571779 /locus_tag="PA1441" /db_xref="GeneID:881825" CDS 1570496..1571779 /locus_tag="PA1441" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250132.1" /db_xref="GeneID:881825" /translation="MAVAPGVLLPPTPDVKPKAAAPKSQQKTPEPSNDKTSSFSDMYA KETAKKPAERADGPAKGSRDKPRDAGKDAAEAQPTDAVRQPAVAEDGKPLPADGQAKA DGEDKVETPVDPLQLLGLGGAVPLLDENTQATLLPPAVPTASSAPASLTEASSDPTLV KLNGVPAVNMALEQGAQDAAQTAKGGPAKSADPRQANLGDALAGLTSDSLTKAVDGKA LEAQLQQTAEPAVASAASESLLESKAEPRGEPFAAKLNGLTQAMAQQALTNRPVNGTV PGQPVAMQQNGWSEAVVDRVMWMSSQNLKSAEIQLDPAELGRLDVRIHMTADQTQVTF ASPNAGVRDALESQMHRLRDMFSQQGMNQLDVNVSDQSLARGWQGQQQGEGGSARGRG LAGEASGDEETLAGVSEIRSRPGASAARGLVDYYA" misc_feature <1570499..1571182 /locus_tag="PA1441" /note="translocon at the inner envelope of chloroplast subunit 62; Provisional; Region: PLN03209" /db_xref="CDD:178748" misc_feature 1571063..1571776 /locus_tag="PA1441" /note="Flagellar hook-length control protein FliK [Cell motility]; Region: FliK; COG3144" /db_xref="CDD:442378" gene 1572023..1572544 /locus_tag="PA1442" /db_xref="GeneID:881856" CDS 1572023..1572544 /locus_tag="PA1442" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="flagellar basal body protein FliL" /protein_id="NP_250133.1" /db_xref="GeneID:881856" /translation="MAKKEATPADAGAPSGGKSKLKLILLIVVGLLLAIGLSVGGTWF FLSKSLKAEKTEEVASEAAKPGKQPALYEILAPAFVVNFNQNGRQRYMQVGVALMGRD KAQMDALREHMPLVRNKLVMLFSSQSFDSLVTPVGKEMLRQQATAGLQELAKKETGQL AIEQVLFTNFVLQ" misc_feature 1572023..1572541 /locus_tag="PA1442" /note="flagellar basal body-associated protein FliL; Reviewed; Region: fliL; PRK05696" /db_xref="CDD:180207" gene 1572552..1573523 /gene="fliM" /locus_tag="PA1443" /db_xref="GeneID:881860" CDS 1572552..1573523 /gene="fliM" /locus_tag="PA1443" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliM" /protein_id="NP_250134.1" /db_xref="GeneID:881860" /translation="MAVQDLLSQDEIDALLHGVDDGLVETEVEATPGSVKSYDLTSQD RIVRGRMPTLEMINERFARYTRISMFNLLRRSADVAVGGVQVMKFGEYVHSLYVPTSL NLVKMKPLRGTALFILDAKLVFKLVDNFFGGDGRHAKIEGREFTPTELRVVRMVLEQA FVDLKEAWQAVLEMNFEYVNSEVNPAMANIVSPSEVVVVSTFHIELDGGGGDLHITMP YSMIEPIREMLDAGFQSDHDDQDERWIKALREDVLDVQVPLGATVVRRQLKLRDILHM QPGDVIPVEMPEHMVMRANGVPAFKVKLGAHKGNLALQILEAVERSR" misc_feature 1572555..1573517 /gene="fliM" /locus_tag="PA1443" /note="flagellar motor switch protein FliM; Validated; Region: fliM; PRK06666" /db_xref="CDD:235849" gene 1573551..1574024 /gene="fliN" /locus_tag="PA1444" /db_xref="GeneID:881851" CDS 1573551..1574024 /gene="fliN" /locus_tag="PA1444" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliN" /protein_id="NP_250135.1" /db_xref="GeneID:881851" /translation="MADEEKVTTEEQALADEWAAALAEAGDASQDDIDALMAQGGATP VAEPSTPRAPMEEFGASPKAPTISGLEGPNLDVILDIPVTISMEVGHTDISIRNLLQL NQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR" misc_feature 1573551..1574021 /gene="fliN" /locus_tag="PA1444" /note="flagellar motor switch protein FliN; Region: fliN; PRK05698" /db_xref="CDD:168189" gene 1574026..1574478 /gene="fliO" /locus_tag="PA1445" /db_xref="GeneID:881854" CDS 1574026..1574478 /gene="fliO" /locus_tag="PA1445" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="flagellar protein FliO" /protein_id="NP_250136.1" /db_xref="GeneID:881854" /translation="MRRYLFAGFLPALASLSAPLCAAEGTTGAAAPTVGAASGAAAQL AQLVLGLGLVIGLIFLLAWLVRRVQQAGPRGNRLIRTLASQPLGPRDRLVLVQVGEEQ ILLGLTPGRITPLHVLKEPVHLPDGEPATPEFAQRLLELLNKDPKGKP" misc_feature 1574164..1574466 /gene="fliO" /locus_tag="PA1445" /note="Flagellar biogenesis protein FliO [Cell motility]; Region: FliO; COG3190" /db_xref="CDD:442423" gene 1574475..1575242 /gene="fliP" /locus_tag="PA1446" /db_xref="GeneID:881863" CDS 1574475..1575242 /gene="fliP" /locus_tag="PA1446" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FliP" /protein_id="NP_250137.1" /db_xref="GeneID:881863" /translation="MTPRISLAGALAALCLLLLAPWPALAADPTSISAITVTTNGQGQ QEYSVSLQILLIMTALSFIPAFVMLMTSFTRIIIVFSILRQALGLQSTPSNQVLVGLA LFLTMFVMAPVFDKINSQALQPYLNEQIPAQEALQKAEVPLKAFMLAQTRTSDLELFV RLSKRTDIGSPEATPLTILVPAFVTSELKTAFQIGFMIFIPFLIIDLVVSSVLMAMGM MMLSPLIISLPFKIMLFVLVDGWALIIGTLAGSFGTV" misc_feature 1574562..1575233 /gene="fliP" /locus_tag="PA1446" /note="Flagellar biosynthesis protein FliP [Cell motility]; Region: FliP; COG1338" /db_xref="CDD:440949" gene 1575290..1575559 /gene="fliQ" /locus_tag="PA1447" /db_xref="GeneID:881853" CDS 1575290..1575559 /gene="fliQ" /locus_tag="PA1447" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FliQ" /protein_id="NP_250138.1" /db_xref="GeneID:881853" /translation="MTPEVALDLFREALWLTAMIVGVLVVPSLLVGLVVAMFQAATQI NEQTLSFLPRLMVILLTLIVLGPWLLRQLMEYTQTLIGNIPLLIG" misc_feature 1575290..1575556 /gene="fliQ" /locus_tag="PA1447" /note="flagellar type III secretion system protein FliQ; Region: fliQ; PRK05700" /db_xref="CDD:235567" gene 1575559..1576335 /gene="fliR" /locus_tag="PA1448" /db_xref="GeneID:881861" CDS 1575559..1576335 /gene="fliR" /locus_tag="PA1448" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FliR" /protein_id="NP_250139.1" /db_xref="GeneID:881861" /translation="MLELTNAQIGGWIASFVLPLFRVAALLMTMPVIGTQLVPVRVRL YLALGVCVVLVPNLPSMPQVDALSMKAMLLIGEQILVGALLGFSLQLLFHAFVIAGQI ISMQMGLGFASMVDPANGVSVPVLGQFFTMLVTLLFLAMNGHLVVFEVIAESFVTLPV GEGLSGNHFWIIAGKLGWVMGAALLLALPAITALLVVNLAFGAMTRAAPQLNIFSIGF PLTLVLGLVILWIGTADLLSQYQVLAGEALQFLRELVRAK" misc_feature 1575583..1576308 /gene="fliR" /locus_tag="PA1448" /note="flagellar type III secretion system protein FliR; Region: fliR; PRK05701" /db_xref="CDD:235568" gene 1576338..1577474 /gene="flhB" /locus_tag="PA1449" /db_xref="GeneID:881855" CDS 1576338..1577474 /gene="flhB" /locus_tag="PA1449" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FlhB" /protein_id="NP_250140.1" /db_xref="GeneID:881855" /translation="MAESESGQDKTEEPTEKRRREAREKGQLPRSRELNTLAILMAGA GGLLIYGADLAGALLRLMRSNFELSRETAMNTESMLQLLGASAYLAAQGLWPILLMLL VAAIVGPIALGGWLFSMDALQPKFSRLNPLSGLKRMFSAKSLLELSKALIKFLVVLAV ALLVLSADRDALLALAHQPLEQAILHSVRVVGWSAFWMACSLLLIAAVDVPYQIWDNR QKLLMTKQEVRDEYKDSEGKPEVKSKIRQMQREMAQRRMMAAVPEADVVITNPTHFAV ALKYDPAGGGAPLLLAKGNDFLALKIREVAQEHKVMVMESPALARAVYYSTELDQEIP AGLYLAVAQVLAYVYQLKQYQAGKGKRPSPLKDLPIPPDLRRDE" misc_feature 1576341..1577417 /gene="flhB" /locus_tag="PA1449" /note="flagellar type III secretion system protein FlhB; Region: flhB; PRK05702" /db_xref="CDD:235569" gene 1577547..1578806 /locus_tag="PA1450" /db_xref="GeneID:881870" CDS 1577547..1578806 /locus_tag="PA1450" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250141.1" /db_xref="GeneID:881870" /translation="MDRTLSDRIFPPVLLLLALAWLLPWMPAHAEAPAEWVALPLSER VVDATHTLDEATRQRLVEKLEALERRRGAQIAVVMLPTTGTLDIEAFSDKLFQAWKLG RKAVDDGLLLVVAKDDRRMRIEVGYGLEGAVPDVVAGRIIRERMAPAFREGDYAGGIE AAVDELIRLVDGETLPAAASSGAPKVSLGQLPAEAWALLVAFIYGSLAGVLLSARALR WPWLLGGALLCWLLGTLAGASGEWMSVLLVAPLCMLVGGATFGALWTVRPAFYLVIGV LVYVALLGLAAHWFSAVSFIYGLLWPAGVLMLAVLCWSNYRLMRSLWRERRKSFHRRL WALLAAYLLLGLLSGGLDAPLVWLALLPFQLMLGLLVFGQVRLSGGGGGSSGSSGGGS SSSSSSSSGGFSGGGGSSGGGGASDSW" misc_feature 1577622..1578329 /locus_tag="PA1450" /note="Uncharacterized membrane protein YgcG, contains a TPM-fold domain [Function unknown]; Region: YgcG; COG1512" /db_xref="CDD:441121" gene 1578839..1580182 /locus_tag="PA1451" /db_xref="GeneID:881862" CDS 1578839..1580182 /locus_tag="PA1451" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250142.1" /db_xref="GeneID:881862" /translation="MSAITRYLAMLRLFGMLLCAAAIPSVATATVPVTVAVAASDVEE EAVEASAVGAEAEAARDAGYESAEVPALARRVTDLTATLDAAERARLEASLAALEARK GAQVAILMVPSTYPDSIEAYATRVFEAWKLGRKGIDDGVLVLVAKDDRRMRIEVGYGL EGTITDIDAGRIIREYMTPAFRQQDYAGGLEAAAQRLVRLIDGEALPPPPRDPLEPGA VRQTLAIAFLLGALGGVALLVRPRAWYWTLGAVVALAAALALGRHWPAGAMVALAEMV AVLGVGFGALLKYSRGARWFFAILVLYALGLFWAYRRYGLPVLHYGLAVPLSLGLSLL MLAGAWQGLRRGRRWAYLPGLLGLLLTLALECLLLLVDDPLNSIEALIILPAACLPLL IGCNFSAGGSGGGRRRGGDYASSSGSSSSSSSSSSSDSFSGGGGSSGGGGASGSW" misc_feature 1579037..1579729 /locus_tag="PA1451" /note="Uncharacterized membrane protein YgcG, contains a TPM-fold domain [Function unknown]; Region: YgcG; COG1512" /db_xref="CDD:441121" gene 1580321..1582444 /gene="flhA" /locus_tag="PA1452" /db_xref="GeneID:881867" CDS 1580321..1582444 /gene="flhA" /locus_tag="PA1452" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FlhA" /protein_id="NP_250143.1" /db_xref="GeneID:881867" /translation="MDRTQLISNVRSNLAGLGRGSLGVPVLLLAMLAMMTLPIPPFLL DVLFTFNIALSIVVLLVCVYALRPLDFAVFPTILLVATLLRLALNVASTRVVLLHGHD GHGAAGKVIQAFGEVVIGGNYVVGVVVFAILMIINFVVVTKGAGRISEVSARFTLDAM PGKQMAIDADLNAGLIEQEEAKKRRSEVAQEADFYGSMDGASKFVRGDAIAGLLILFI NLIGGVAIGMIQHSMSFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRVSSSED MGQQVNRQMFASPKALAISAAILIAMGAVPGMPHVSFIGLGALAGAAAYWIWHRQNKA KQVAEQEVQRQQELLPAQRAQEVKELGWDDVTPVDMVGLEVGYRLIPLVDRNQGGQLL ARIKGVRKKLSQELGFLMPSVHIRDNLDLLPNAYRLTLMGVSVAEAEIYPDRELAINP GQVFGSLNGIAGKDPAFGLEAVWIEPGQRDQAQSLGYTVVDASTVVATHLNQVLHKHA HELLGHEEVQQLLQLLARSSPKLAEELVPGLISLSTLLKVLQALLQEQVPVRDIRTIA EAIANVAPRSQDPGAMVAAVRVALSRAIVQSIVGLEPELPVITLEPRLEQILLNSMQK AGQGSEDGMLLEPGMAEKLQRSLIESAQRQEMLGKPAILLVAGPIRSMMSRFARMAVP SMHVLAYQEIPDNKQVTIVATVGQN" misc_feature 1580384..1582435 /gene="flhA" /locus_tag="PA1452" /note="Flagellar biosynthesis protein FlhA [Cell motility]; Region: FlhA; COG1298" /db_xref="CDD:440909" gene 1582528..1583817 /gene="flhF" /locus_tag="PA1453" /db_xref="GeneID:881865" CDS 1582528..1583817 /gene="flhF" /locus_tag="PA1453" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis regulator FlhF" /protein_id="NP_250144.1" /db_xref="GeneID:881865" /translation="MQVKRFFAADMRQAMKLVRDELGPDAAILGNRRVAGGIELTAAL DYQAPPAPSKPNPALEVELRKTQARIAEARAELTARPAETQRKDRQLFAEEKPARPTL AESMTAAHAKPQVGGQTLEAMRFELNGLRELIEVQLGSIAWGQLQHQRPQQANLWRRL QRMGLPAELSKPLLERVAAVGDTRQAWRMLLAHLSRAVQTPEQDPLDAGGVLALVGPA GAGKTTTLAKMAARYVLKYGAQSLALVSMDSYRIGAQEQIKTLGRILNVPVTLVDPGQ SLIQALAPLARKRMVLIDTAGLPASDPALRMQLEALASPSLNVKNYLVMATTSQSQVL KSAYQTYRHCGLAGCILTKLDEAGSLGESMALAIAQRLPVAYLADGPRIPDDLQVARS HQLVSRAVSLQAPEEPSEDAMAEMFAGLYQQPARRAG" misc_feature 1582528..1583760 /gene="flhF" /locus_tag="PA1453" /note="flagellar biosynthesis protein FlhF; Region: flhF; PRK05703" /db_xref="CDD:235570" gene 1583956..1584798 /gene="fleN" /locus_tag="PA1454" /db_xref="GeneID:881866" CDS 1583956..1584798 /gene="fleN" /locus_tag="PA1454" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="flagellar synthesis regulator FleN" /protein_id="NP_250145.1" /db_xref="GeneID:881866" /translation="MKQMGSMHPVQVIAVTGGKGGVGKTNVSVNLALALADLGRRVML LDADLGLANVDVLLGLTPKRTLADVIEGRCELRDVLLLGPGGVRIVPAASGTQSMVHL SPMQHAGLIQAFSDISDNLDVLVVDTAAGIGDSVVSFVRAAQEVLLVVCDEPTSITDA YALIKLLNRDHGMTRFRVLANMAHSPQEGRNLFAKLTKVTDRFLDVALQYVGVIPYDE SVRKAVQKQRAVYEAFPRSKASLAFKAVAQKVDSWPLPANPRGHLEFFVERLVQHPAT GSAV" misc_feature 1584025..1584675 /gene="fleN" /locus_tag="PA1454" /note="MinD-like ATPase FlhG; Region: FlhG-like; cd02038" /db_xref="CDD:349758" gene 1584795..1585538 /gene="fliA" /locus_tag="PA1455" /db_xref="GeneID:881996" CDS 1584795..1585538 /gene="fliA" /locus_tag="PA1455" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis sigma factor FliA" /protein_id="NP_250146.1" /db_xref="GeneID:881996" /translation="MTAASGVRMYSKAQAQNSQEQLIQRYAPLVKRIAYHLLGRLPAS VQVEDLMQAGMIGLLEAAKKYDAGKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRN TRMVTDAIRAIEARTGRDAKDHEVAAELQLSLEDYYGILSDTQGSRLYSFDDLLQDGE HGLPEDTSLSHNEPIHGLLDERFQAALADAIAKLPERERLVLALYYDEELNLKEIGEV LGVSESRVSQLHSQCAARLRARLADWRSA" misc_feature 1584819..1585529 /gene="fliA" /locus_tag="PA1455" /note="flagellar biosynthesis sigma factor; Validated; Region: fliA; PRK06986" /db_xref="CDD:235901" gene 1585640..1586014 /gene="cheY" /locus_tag="PA1456" /db_xref="GeneID:882097" CDS 1585640..1586014 /gene="cheY" /locus_tag="PA1456" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="chemotaxis protein CheY" /protein_id="NP_250147.1" /db_xref="GeneID:882097" /translation="MKILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTTALPMLHSG NFDFLVTDWNMPGMTGIDLLRAVRADERLKHLPVLMVTAEAKRDQIIEAAQAGVNGYV VKPFTAQVLKEKIEKIFERVNG" misc_feature 1585640..1585996 /gene="cheY" /locus_tag="PA1456" /note="phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY3 and similar CheY family proteins; Region: REC_CheY_CheY3; cd19923" /db_xref="CDD:381150" gene 1586034..1586822 /gene="cheZ" /locus_tag="PA1457" /db_xref="GeneID:880861" CDS 1586034..1586822 /gene="cheZ" /locus_tag="PA1457" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="protein phosphatase CheZ" /protein_id="NP_250148.1" /db_xref="GeneID:880861" /translation="MVLGNDSTGDEFESTLKKHARELVDCLERGHFQQAVQLIQELSQ ARDRGLYQEVGKLTRELHNAIVDFQIDPHSPHAQEMSQIADATDRLSYVVEMTEKAAN RTMDLVEQSAPLVNQLGDDSRELHQEWQRFMRREIDADGFRELAKRIEQFLVRSGENA GQLSSQLNDILLAQDYQDLTGQVIKRVTKLVTEVESNLVKLVWMAGQVDRYAGIEHDH VSMRHQAALERSAKGEGPQVAAEKREDVVSGQDDVDDLLSSLGF" misc_feature 1586181..1586819 /gene="cheZ" /locus_tag="PA1457" /note="Chemotaxis phosphatase, CheZ; Region: CheZ; pfam04344" /db_xref="CDD:427881" gene 1587023..1589284 /locus_tag="PA1458" /db_xref="GeneID:882057" CDS 1587023..1589284 /locus_tag="PA1458" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_250149.1" /db_xref="GeneID:882057" /translation="MSFDADEEILQDFLVEAGEILEQLSEQLVELESRPDDMDLLNAI FRGFHTVKGGAGFLQLNALVECCHIAENVFDILRKGERRVSSELMDVVLQALDTVNAM FDQVREQSEPTPATPELLAALARLAEPEGAEPAEPVQAPPAAVPPAEPAAPPEAPAQS ASSDITDDEFEQLLDALQGDEAPASAVAEAPAAPAGDEISDAEFEALLDQLHGKGKFV PPAVSAEPAQVPAEAVEPAAAAAGDDISDDEFEALLDELHGKGKFGDVPEAAGTPAAP AAAAPAAAPAEQGKAPAAAGGDEISDDEFESLLDELHGKGKFNGASEAVAAAAAVAKN IAAKSPAAKPVAPAKAAAARPAAPDRPAASEAETTVRVDTARLDEIMNMVGELVLVRN RLVRLGLNSGDEAMAKAVANLDVVTGDLQMSVMKTRMQPIKKVFGRFPRLVRDLARNM KKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGIESPEEREAAGKPRVGQVVL SAEQEGDHILLMITDDGKGMDAEVLRNKAVEKGLLERDAADRLTDLECYNLIFAPGFS TKTEISDVSGRGVGMDVVKTKISQLNGTVNVFSQKGSGSKIVIKVPLTLAIMPTLMVM LGSQAFAFPLVNVNEIFHLDLSRTNVVDGQEVVIVRDKALPLFYLKRWLVPSAAHEEQ GEGHVVILSVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPGMAGATITGDGRIALIL DVPSMLKRYARRI" misc_feature 1587038..1589278 /locus_tag="PA1458" /note="Chemotaxis protein histidine kinase CheA [Signal transduction mechanisms]; Region: CheA; COG0643" /db_xref="CDD:440408" gene 1589338..1590444 /locus_tag="PA1459" /db_xref="GeneID:882084" CDS 1589338..1590444 /locus_tag="PA1459" /EC_number="3.1.1.61" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis-specific methylesterase" /protein_id="NP_250150.1" /db_xref="GeneID:882084" /translation="MAVKVLVVDDSGFFRRRVSEILSADGQIQVVGTGTNGREAIEQA LALRPDVITMDYEMPLMDGITAVRNIMQRCPTPVLMFSSLTHEGARVTLDALDAGAVD YLPKNFEDISRNPDKVRQLLCEKVLTIARSNRRSISLPPLPSATSSSHAPASSSSVGA SARVGAGASPAPASTSAAPKRKAYRLVAIGTSTGGPVALQRVLTQLPANFPAPLVLIQ HMPAAFTKAFAERLDKLCRINVKEAEDGDILRPGLALLAPGGKQMMVDGRGTVRILPG DERLNYKPCVDVTFGSAAKAYNDKVLAVVLTGMGADGREGARLLKQGGSQVWAQDEAS CVIYGMPMAVVKANLADAVYGLDDIGRHLVEACQ" misc_feature 1589338..1590438 /locus_tag="PA1459" /note="chemotaxis-specific protein-glutamate methyltransferase CheB; Region: PRK00742" /db_xref="CDD:234828" gene 1590533..1591273 /gene="motC" /locus_tag="PA1460" /db_xref="GeneID:882162" CDS 1590533..1591273 /gene="motC" /locus_tag="PA1460" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="flagellar motor protein" /protein_id="NP_250151.1" /db_xref="GeneID:882162" /translation="MDVLSLVGIILAFVAIVGGNFLEGGHAGALLNGPAALIVIGGTL AAALLQTPVNVLKRGLGMLGWVFFPPREDLSGGIDRIVSWSMTARKEGLLGLESIADA EPDPYARKGLQLLVDGAEPEVIRSILEVDLFTQESRDLQAAKVFESMGGYAPTIGIIG AVMGLIHVMGNLANPAQLGSGIAVAFVATIYGVGFANLLLLPIGNKLKTLVLRQSRYR EMLLEGLLSIAEGENPRSIELKLQGFMD" misc_feature 1590533..1591270 /gene="motC" /locus_tag="PA1460" /note="flagellar motor protein; Reviewed; Region: motC; PRK09109" /db_xref="CDD:181654" gene 1591286..1592176 /gene="motD" /locus_tag="PA1461" /db_xref="GeneID:880913" CDS 1591286..1592176 /gene="motD" /locus_tag="PA1461" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="flagellar motor protein MotD" /protein_id="NP_250152.1" /db_xref="GeneID:880913" /translation="MQRRRRHQEEHENHERWLVSYADFITLLFAFFVVMYSISSINEG KYKILSETLTGVFNQPDRSLKPIPIGDERPRTTEPERTSVEEQPSDNAASADSLERIA DSVRDAFGDLIASDQLSVRGNELWIEITLNSSLLFPSGDALPNDAAFDIVEKVAKILA PYKNPIHVEGFTDDVPIHSPRYPTNWELSAARAASIVRLLGNDGVEPSRMAAVGYGEF QPVADNASAEGRAKNRRVVLVISRNLEVRRSVSGVGSGKAQPDSALRHAGSAAGTQAA DTGGTPAPAPATVNSPSPSP" misc_feature 1591286..1592128 /gene="motD" /locus_tag="PA1461" /note="flagellar motor protein MotD; Reviewed; Region: PRK09038" /db_xref="CDD:181618" gene 1592271..1593059 /locus_tag="PA1462" /db_xref="GeneID:882058" CDS 1592271..1593059 /locus_tag="PA1462" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="plasmid partitioning protein" /protein_id="NP_250153.1" /db_xref="GeneID:882058" /translation="MKVWAVANQKGGVGKTTSSIALAGLLADAGKRVVVVDLDPHGSM TSYFGYDPDTLEHSAFDLFLHQGNVPEGLPASLLRSTSNERISLLPSSTALATLERQS PGKSGLGLVVSKSLAQLWQDFDHAIIDSPPLLGVLMVNALAASQHLVIPVQTEFLAVK GLERMVNTLAMINRSRKQALPYTIVPTLFDRRTQASLSTLRILNENYPDNLWQAFIPI DTRLRDASRAGVTPSQHDGKSRGVIAYRALLKHLLAQQPATRVA" misc_feature 1592271..1593035 /locus_tag="PA1462" /note="ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ [Cell cycle control, cell division, chromosome partitioning, Cell motility]; Region: ParA; COG1192" /db_xref="CDD:440805" gene 1593151..1594041 /locus_tag="PA1463" /db_xref="GeneID:882046" CDS 1593151..1594041 /locus_tag="PA1463" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250154.1" /db_xref="GeneID:882046" /translation="MSAATATRSQLALQSYLDALLQEATFEDLEPLVETPPAPAPAPL KPVALAVAEVATPAPALETLPVDHGFDEFEAAVLEEQVRDARLVPPAPAALLDEPTTL RELPVEPRPHEVIELRVPSAPASVGEPPLLDLPLLDDGRPAWAAEPFECLLFDVAGLT LAVPLVCLGSIYPLENQELTPLFGQPDWFLGILPSQAGNLKVLDTARWVMPERYRDDY RDGLKYVISVQGYEWGLAVHQVSRSIRLDPAEVKWRSQRSQRPWLAGTVIEHMCALLD VAALAELIASGAVKRLHGDH" misc_feature 1593604..1593990 /locus_tag="PA1463" /note="CheW-like domain. CheW proteins are part of the chemotaxis signalling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and...; Region: CheW_like; cd00588" /db_xref="CDD:238331" gene 1594087..1594566 /locus_tag="PA1464" /db_xref="GeneID:882080" CDS 1594087..1594566 /locus_tag="PA1464" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="purine-binding chemotaxis protein" /protein_id="NP_250155.1" /db_xref="GeneID:882080" /translation="MSKATAQSAEDPILQWVTFRLDNESYGINVMQVQEVLRYTEIAP VPGAPSYVLGIINLRGNVVTVIDTRQRFGLDPAPVSDNTRIVIIEADKQVVGILVDSV AEVVYLKQSEIETAPNVGNEESAKFIQGVCNKNGELLILVELDKMMTEEEWSELGSI" misc_feature 1594123..1594542 /locus_tag="PA1464" /note="a small regulator protein, unique to the chemotaxis signalling in prokaryotes and archea. CheW interacts with the histidine kinase CheA, most likely with the related regulatory domain of CheA. CheW is proposed to form signalling arrays together with CheA...; Region: CheW; cd00732" /db_xref="CDD:238374" misc_feature order(1594255..1594272,1594354..1594356,1594360..1594362, 1594519..1594542) /locus_tag="PA1464" /note="putative CheA interaction surface [active]" /db_xref="CDD:238374" gene 1594597..1595004 /locus_tag="PA1465" /db_xref="GeneID:880524" CDS 1594597..1595004 /locus_tag="PA1465" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250156.1" /db_xref="GeneID:880524" /translation="MEVVALALALAACLGLAAACLWLRRELRRLQAALAQQAEEGAAR ERRLKELSKRIESYQQVNVRMGEALQDLGKQLAPLPDRVARLEQRDPTTLSFSQAARL VGLGASAEDLTQACGLSQAEAELVARLHEAKGK" misc_feature 1594801..1594986 /locus_tag="PA1465" /note="Protein of unknown function (DUF2802); Region: DUF2802; pfam10975" /db_xref="CDD:431570" gene complement(1595032..1595718) /locus_tag="PA1466" /db_xref="GeneID:881541" CDS complement(1595032..1595718) /locus_tag="PA1466" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250157.1" /db_xref="GeneID:881541" /translation="MEPVLFYGVPHGCSFGSIVALEWLGRPYRLCRIEMPLDTGERTY VRLNPARQTPTLLLEDGRALSESLAILQHLAARDLCRKLGYPQGSAEFDELNFALALL HTECHSAWGALFYLEDADATTTARALTRAARAYGRIDKLLGDRKWLAGEGPSVADAYL AGTARWGRELGYFDLQHDFPRLHRHLEKLEQDPAVRFAHAIEDRLPAQSCGEFRGEVT LAEVASRLLA" misc_feature complement(1595104..1595706) /locus_tag="PA1466" /note="Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]; Region: GstA; COG0625" /db_xref="CDD:440390" gene 1595827..1596798 /locus_tag="PA1467" /db_xref="GeneID:880970" CDS 1595827..1596798 /locus_tag="PA1467" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250158.1" /db_xref="GeneID:880970" /translation="MSKPTVRVLALLELLQSHGQLSGSELARRLEVDGRTLRRYIVAL EELGIPISAERGRHGGYRLVAGFKLPPLMFSAEETLAVSLGLLAVRSLGLGESELALE SAQAKLSRVMPVALRRRLVALRETASLDLARARAGTSVAALATLAEAAQVRARVEFRY RDPQGAETLRQLDPYGLAYRNGCWYVSGFCHLRQALRSFRLDRLDAPRMLAERFERPA DFDTLRHLRESFARMPRAYPVEILMRAAREQVVAVLGEPLGLLAEVDGGTLLRASTDD LDWFARRLCGLPFDFEVRQPLELREPLRRQAERVLRNLGQEEASDHR" misc_feature 1595833..1596771 /locus_tag="PA1467" /note="Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains [Transcription]; Region: YobV; COG2378" /db_xref="CDD:441945" gene 1596889..1597305 /locus_tag="PA1468" /db_xref="GeneID:880967" CDS 1596889..1597305 /locus_tag="PA1468" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250159.1" /db_xref="GeneID:880967" /translation="MPAIPLRAMVLCANPGRLLRYGALFNRCGYFHLSLCLDRRELRR SLDQGYPYDYCLYDGFRLDQGCKGTLAMLGRSGSIRRFLLVGELDCREKRLLFEWSRG HGLSIGAVSDRPLGQVALAALIKRDRGCPDLLRGIA" gene 1597365..1598087 /locus_tag="PA1469" /db_xref="GeneID:879261" CDS 1597365..1598087 /locus_tag="PA1469" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250160.1" /db_xref="GeneID:879261" /translation="MTVQADILKAIEGIEHGFQQAGQALSERIFHCRQVHGAEIVDAR SLSESGRHAADGVFSEGPLAVAVVTADCLPILMSSRDGRVVAALHGGWQGLVAGIVGA AVARFNARGVASADIRVAIGPGIKACCYEVSAGFIEALQVGHGRLWEGAAPPWSQRRP LPERPPRFAPPEPRQAEQGAWLDLVAFCRQLFQAAGVGPAQIEASAVCTYCSGDAFAS HRRRQRLGEEKRQQYAWIARKP" misc_feature 1597446..1598033 /locus_tag="PA1469" /note="protein of unknown function YfiH; Region: YfiH; cd16833" /db_xref="CDD:319354" misc_feature order(1597578..1597580,1597629..1597631) /locus_tag="PA1469" /note="putative catalytic site [active]" /db_xref="CDD:319354" gene 1598221..1598958 /locus_tag="PA1470" /db_xref="GeneID:880940" CDS 1598221..1598958 /locus_tag="PA1470" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_250161.1" /db_xref="GeneID:880940" /translation="MPDITQAAIVTGASRGIGRAIARRLAADGFAVAVNYASNQAMAD EVVAEIVAAGGAAIAVQGDVASAEDMDKLFEATRGAFGRIDVVVNSAGTMPYLKIADG DLEGFDRVIRTNLRGAFIVLGLAARHVERGGRIIALSTSVIARALPSYGPYIASKSGV EGLVHVLANELRGQDIRVNAVAPGPVATELFFNGKSAEQIDQIARLAPLERLGEPDEI AAAVSFLAGPDGAWVNSQVLRVNGGFA" misc_feature 1598221..1598955 /locus_tag="PA1470" /note="short chain dehydrogenase; Provisional; Region: PRK12937" /db_xref="CDD:171821" gene complement(1599024..1599320) /locus_tag="PA1471" /db_xref="GeneID:881086" CDS complement(1599024..1599320) /locus_tag="PA1471" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250162.1" /db_xref="GeneID:881086" /translation="MKKHTLFAVAALGLLFAGSTLLPGELSPVGSAYAKGGNGGGNLG GHSSKGHGSATSGIASSRDSRGLSQASAISATTPGDHNSKGLSNAIGSSTKNDR" gene complement(1599428..1599982) /locus_tag="PA1472" /db_xref="GeneID:880987" CDS complement(1599428..1599982) /locus_tag="PA1472" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250163.1" /db_xref="GeneID:880987" /translation="MNFVFPHPLDTPRLRLRTFREEDAAPLFAMMSDPEVMRYWNTPP WTTPAQAREAILRDSQALVDGEYLNLAIERREDGQLLGSCILFHFEKGSRRAELGYCL ARAAQGRGYMGEALRRLLAFAFDEIDLNRLEAEIDPRNRPSAASLERLGFRQEGLLAQ RWIVSGEVSDSALYGLLAEHWRNR" misc_feature complement(1599446..1599961) /locus_tag="PA1472" /note="Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: RimL; COG1670" /db_xref="CDD:441276" gene complement(1600083..1600418) /locus_tag="PA1473" /db_xref="GeneID:880972" CDS complement(1600083..1600418) /locus_tag="PA1473" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250164.1" /db_xref="GeneID:880972" /translation="MNRKQSPAPRQAIALSYDGQAAPTLSAKGDAELAEAILAIARDY EVPIYENAELVRLLARLELGDAIPEALYRTIAEIIAFAWHLKGKCPEGFAPDAADGNQ MLLLGGPGD" misc_feature complement(1600140..1600418) /locus_tag="PA1473" /note="Type III secretion system substrate exporter, FlhB-like [Intracellular trafficking, secretion, and vesicular transport]; Region: YlqH; COG2257" /db_xref="CDD:441858" gene complement(1600415..1601893) /locus_tag="PA1474" /db_xref="GeneID:881069" CDS complement(1600415..1601893) /locus_tag="PA1474" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250165.1" /db_xref="GeneID:881069" /translation="MTLKLVQTLAGLLGEGESGKAEVLAVKEGLANNFQVLLKLTLAN SGQSLVEVQSNRPLVPGNLLNVSATSNTSVVATLLDSMAGAGPLSSLDLEQLPPGTLL QGKVLSSTALPADKAQQVVYRVLLNLLNTPLAGSKLSLDSPQALPVGSLLTALVKNSQ QIDFLPLSGRLDQLALGQQLAGQSARQASLEGLFAALQGLNGRNDLPDSLRQAVERLF AGLPEAQKMGDSKLLGQALQQSGLFLEARLMQGATDHLGHDLKANLLRLFAQLSPLPP TGAQAPGMFAGNTANLAQALPAFVRNALGNLGQSANKTQALNFPLPSKVLQLFDEDME LESLLRLAAAAISRLQTHQLSSLAQTSTLPDGTQLATWQMEVPMRHQHSVVPLQVKFQ EEQRKTGEEARESLWRVELAFDLEPLGPLHAQATLLRGSLSSQLWAERDATARLVEHE LGHLRQRLRDAGLTVGEITCQRGRPPQGPRATIEQRWVDETA" misc_feature complement(1600460..1600693) /locus_tag="PA1474" /note="Flagellar hook-length control protein FliK; Region: Flg_hook; pfam02120" /db_xref="CDD:460451" protein_bind complement(1600752..1600764) /locus_tag="PA1474" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1473" /bound_moiety="AmrZ" gene 1602179..1602880 /gene="ccmA" /locus_tag="PA1475" /db_xref="GeneID:880978" CDS 1602179..1602880 /gene="ccmA" /locus_tag="PA1475" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome c biogenesis ATP-binding export protein CcmA" /protein_id="NP_250166.1" /db_xref="GeneID:880978" /translation="MSDPAEVPTASPLLETVGLACERDWRMLFERLDLRLAAGEMLQV VGPNGSGKTSLLRLLSGLMQPTAGEVRLNGRPLAEQRGELARSLLWIGHAAGIKGLLS AEENLTWLCALHQPASREAIWQALADVGLRGFEDVPCHTLSAGQQRRVALARLYLDAP PLWILDEPFTALDKQGVAQLETHLAGHCQRGGMVVLTTHHSLQQVPAGYRELDLGALK AASGATVEPALGDPA" misc_feature 1602215..1602826 /gene="ccmA" /locus_tag="PA1475" /note="cytochrome c biogenesis heme-transporting ATPase CcmA; Region: PRK13538" /db_xref="CDD:184125" gene 1602877..1603548 /gene="ccmB" /locus_tag="PA1476" /db_xref="GeneID:880948" CDS 1602877..1603548 /gene="ccmB" /locus_tag="PA1476" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="heme exporter protein CcmB" /protein_id="NP_250167.1" /db_xref="GeneID:880948" /translation="MSNVFSLLLAREARLLFRRPAELANPLVFFAIVIALFPLAVGPE SQLLQTLSPGLVWVAALLAVLLSLEGLFRSDFEDGSMEQWVLSPHPLALLVLAKVLAH WLFSGLALVLMSPLFALMLGLPARCIPVLLLSLLLGTPVLSLLGAVGAALTVGLKRGG LLLALLILPLYIPVLILGSGALQASLQGLPSSGHLLWLASLTALALTLTPFAIAAGLK ISVGE" misc_feature 1602925..1603530 /gene="ccmB" /locus_tag="PA1476" /note="heme exporter protein CcmB; Region: ccmB; TIGR01190" /db_xref="CDD:200083" protein_bind complement(1603172..1603184) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1603671..1604429 /gene="ccmC" /locus_tag="PA1477" /db_xref="GeneID:881087" CDS 1603671..1604429 /gene="ccmC" /locus_tag="PA1477" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="heme exporter protein CcmC" /protein_id="NP_250168.1" /db_xref="GeneID:881087" /translation="MMNWTWFHKLGSPKWFYEISGRWLPWFAVAAALLIVTGCVWGLA FAPPDYQQGNSFRIIYIHVPAAFLAQSCYVMLAVAGAVGLIWKMKIADVAVQCAAPIG AWMTFVALLTGAVWGKPTWGAWWVWDARLTAMLILLFLYFGIIALGQAISNRDSAAKA CAVLAIVGVVNIPIIKYSVEWWNTLHQPATFTITEKPAMPVEMWLPLLIMVLGFYCFF AAMLLVRMRLEVLKRESRTAWAKAEVKALVEKAR" misc_feature 1603809..1604360 /gene="ccmC" /locus_tag="PA1477" /note="heme exporter protein CcmC; Region: ccmC; TIGR01191" /db_xref="CDD:273492" gene 1604426..1604602 /locus_tag="PA1478" /db_xref="GeneID:880954" CDS 1604426..1604602 /locus_tag="PA1478" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="heme exporter protein CcmD" /protein_id="NP_250169.1" /db_xref="GeneID:880954" /translation="MSFESFGDFLAMGHHGPYVWSAYGISLLVLAINVAEPLLARRRY LQEEARRLRREAQQ" misc_feature 1604426..1604599 /locus_tag="PA1478" /note="Heme exporter protein D [Intracellular trafficking, secretion, and vesicular transport]; Region: CcmD; COG3114" /db_xref="CDD:442348" protein_bind complement(1604511..1604523) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1604599..1605087 /gene="ccmE" /locus_tag="PA1479" /db_xref="GeneID:881024" CDS 1604599..1605087 /gene="ccmE" /locus_tag="PA1479" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome c-type biogenesis protein CcmE" /protein_id="NP_250170.1" /db_xref="GeneID:881024" /translation="MNPVRKKRLIIVLAIVAGVGAAVGLALSALQQNINLFYTPTQIA NGEAPTDTRIRAGGLVEKGSLQRSEDSLNVRFVVTDGAKEVTIAYHGILPDLFREGQG IVALGKLGGDGVLVADEVLAKHDENYMPPEVTKALKDSGQLKHYENGKAAGETSYNQE GK" misc_feature 1604599..1605045 /gene="ccmE" /locus_tag="PA1479" /note="cytochrome c maturation protein CcmE; Region: PRK13254" /db_xref="CDD:237317" gene 1605088..1607061 /gene="ccmF" /locus_tag="PA1480" /db_xref="GeneID:881004" CDS 1605088..1607061 /gene="ccmF" /locus_tag="PA1480" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome c-type biogenesis protein CcmF" /protein_id="NP_250171.1" /db_xref="GeneID:881004" /translation="MIPELGHLALILALCLALVQSSLPLVGAWRGDRQWMSLARPAAW GQFAFLAFAFGCLTWAFLRDDFSVAYVAGNSNSALPWYYKFSAVWGAHEGSLLLWALI LGGWTFAVSIFSRQLPEVMLARVLAVMGMISTGFLLFLIITSNPFSRLLPQTPMDGND LNPLLQDVGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTLVAWAF LGIGIVLGSWWAYYELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWT VLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPERGVFILAFLLLVVGGSLTLFALRA PVVKSQVGFALWSRETLLLLNNLVLVVAASMILLGTLYPLLLDALSGAKLSVGPPYFN AMFLPLMAALMAALAVGVLVRWKDTPSRWLLGMLTPVLAASAVLAAAGSMYFGDFNWA VLAVFLLSAWVVLAGFRDFLDKTRHKGVLAGARSLTRSYWGMQLAHLGIAVCAIGIVL SSQYSAQRDLRMSPGDTVELGGYHFLFDGAKHHEGPNYTSDKGSIHVSRDGKEIATLH PEKRLYTVQSSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRVHVKPFVRWIWFGGLL MGLGGALAALDRRYRVKVKTRVREALGLAGQGA" misc_feature 1605091..1607034 /gene="ccmF" /locus_tag="PA1480" /note="Cytochrome c biogenesis protein CcmF [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]; Region: CcmF; COG1138" /db_xref="CDD:440753" gene 1607065..1607607 /gene="ccmG" /locus_tag="PA1481" /db_xref="GeneID:881065" CDS 1607065..1607607 /gene="ccmG" /locus_tag="PA1481" /note="Thiol:disulfide interchange protein DsbE" /codon_start=1 /transl_table=11 /product="cytochrome c-type biogenesis protein CcmG" /protein_id="NP_250172.1" /db_xref="GeneID:881065" /translation="MKRAILLLPLGIFLIVAVFLFRGLWLDPSELPSALIGKPFPAFD LPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQGVVIYGINYKDD NAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQK VWREQLAPLYQQLLDEPEAR" misc_feature 1607065..1607592 /gene="ccmG" /locus_tag="PA1481" /note="The thioredoxin (TRX)-like superfamily is a large, diverse group of proteins containing a TRX fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox...; Region: Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; cl00388" /db_xref="CDD:469754" misc_feature order(1607284..1607286,1607293..1607295) /gene="ccmG" /locus_tag="PA1481" /note="catalytic residues [active]" /db_xref="CDD:239308" misc_feature 1607365..1607433 /gene="ccmG" /locus_tag="PA1481" /note="central insert [active]" /db_xref="CDD:239308" gene 1607604..1608071 /gene="ccmH" /locus_tag="PA1482" /db_xref="GeneID:881029" CDS 1607604..1608071 /gene="ccmH" /locus_tag="PA1482" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome c-type biogenesis protein CcmH" /protein_id="NP_250173.1" /db_xref="GeneID:881029" /translation="MKRFLATALLGLALCGVARAAIDTYEFASDAERERFRNLTQELR CPKCQNQDIADSNAPIAADLRKQIYGQLQQGKSDGEIVDYMVARYGDFVRYKPPVNER TWLLWFGPGALLLFGVLVIGVIVLRRRRTAAKVQTTLSAEEQARLANLLKNDK" misc_feature 1607646..1608056 /gene="ccmH" /locus_tag="PA1482" /note="Cytochrome C biogenesis protein; Region: CcmH; pfam03918" /db_xref="CDD:461092" misc_feature order(1607736..1607738,1607745..1607747) /gene="ccmH" /locus_tag="PA1482" /note="putative catalytic site [active]" /db_xref="CDD:319866" gene 1608068..1609291 /gene="cycH" /locus_tag="PA1483" /db_xref="GeneID:881742" CDS 1608068..1609291 /gene="cycH" /locus_tag="PA1483" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome c-type biogenesis protein CycH" /protein_id="NP_250174.1" /db_xref="GeneID:881742" /translation="MIDFWLAAGLLLLAALAFLLIPLLRGRRAQAEEDRTALNVALYQ ERIAELAGQQAAGTLTAEQLENGRAEAARELLADTEGSGEERSSRLGRAVPLVAALLV PLVALGLYLHWGASDKVELAREFAQAPHSMEEMTARLERAVQAQPDSAQGWYFLGRTY MTQERGADAARAFERAAELSGRQPEVLGQWAQALYFSGGKKMTAQIKALADEALKGDP AEVTTLGLLGIAAFEEQRYADAIGFWERLVSVLPNEDPARSAIQGGIQRARERMTEAG QTPPAPAAPAAAGVTLTVKVDISDAVKGQVKADDSVFVFARAVGGPPMPLAVKRLTVA DLPAEVSLSDADAMMPQLKLSGFPQVELVARVSRAGNAISGEWIGRGKPLSTAQSSAQ ALTIDGPDQPQAARP" misc_feature 1608128..1608412 /gene="cycH" /locus_tag="PA1483" /note="cytochrome c-type biogenesis protein CcmI; Region: cytochro_ccmI; TIGR03142" /db_xref="CDD:274446" misc_feature 1608467..1608871 /gene="cycH" /locus_tag="PA1483" /note="Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]; Region: NrfG; COG4235" /db_xref="CDD:443378" gene 1609318..1609734 /locus_tag="PA1483a" /db_xref="GeneID:17373352" CDS 1609318..1609734 /locus_tag="PA1483a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719744.1" /db_xref="GeneID:17373352" /translation="MKAKYLGLAILLGGLGGCVVHPPQTSEPPASLPPQSQPQPGPSS APGATPPRITPQPQTPAQPSRSRPQFAPPPGGKGVWDGSLGVYVIRGERDLYYRQRTY YRWDGGWFWSTSPQGPWTETDARGIPPGLSRRYANP" gene complement(1609738..1610544) /locus_tag="PA1484" /db_xref="GeneID:881626" CDS complement(1609738..1610544) /locus_tag="PA1484" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250175.1" /db_xref="GeneID:881626" /translation="MHTLFRDIGMHASLGRAIEQIGGNRFWKQLILLLRQHLPFDNAL AIFYPANGVPVALEEYDAEPHAGPASMLAYLNGLYLLDPFYQACREGLASGLYRLEEI APDHFRQSEYYLSYFHDNVLEDEVQFILQVPGQGALSLSLGMQRMFADEECGMLGLLS SWVLALMQQHWQQRSQRLLPAAPQEEMATQIRDALSHFGASVLSERELEIARLILRGY SSKAMAERLAISPETIKVHRRHLYAKLDISSQPELFSLFIQSLGHDPENP" misc_feature complement(1609765..1610313) /locus_tag="PA1484" /note="DNA-binding transcriptional regulator, CsgD family [Transcription]; Region: CsgD; COG2771" /db_xref="CDD:442052" misc_feature complement(1609774..1609947) /locus_tag="PA1484" /note="helix_turn_helix, Lux Regulon; Region: HTH_LUXR; smart00421" /db_xref="CDD:197715" gene 1610745..1612112 /locus_tag="PA1485" /db_xref="GeneID:881737" CDS 1610745..1612112 /locus_tag="PA1485" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_250176.1" /db_xref="GeneID:881737" /translation="MSSSPAPESALKPTLGVFDVVAITVSAVTPASSVFVIAPFAIQQ AGTGAFWAFALAGVLALMFAWCYAELGRAHSTAGGEYVYAKRVFGGLAGYATFLTVLA MLLFIPPVLATGAATYLNAALGTHFDAQTVALAIVAFSYLLGILNIRVNAWVTGTCLL LEVAALLVIVGLGFGHAQQPASVLLQPQVVGDGGLLAIAPWALVIGAVGTALFSYNGF GGAVLLAEDMKDGGHSVHRAVLWSLALVVLIEIVPLAALLIGAPSLPAMLASPDPIGY LLNSHGNETLSRLVSAGIFLSVFNAIVAIVIQSARVIFSSGRDALWMPALNRAFTRIH PRWESPWLATLFLAIPSAALSFSSNLAELTSFTVLLIVMVYLIVALCALFSRVLRRDR EHPYRMPLWPLPALLAVSGAGYLLLNLFLAASARDVMIIVGLLAVSVILYCTYGKLSP AFQKL" misc_feature 1610754..1612085 /locus_tag="PA1485" /note="Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; Region: PotE; COG0531" /db_xref="CDD:440297" gene 1612126..1613226 /locus_tag="PA1486" /db_xref="GeneID:881720" CDS 1612126..1613226 /locus_tag="PA1486" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250177.1" /db_xref="GeneID:881720" /translation="MRARQLGITLGLGTPGPFNAITDVPGVRVGHSTLNQRIDGRQVR TGVTLVQPRAGAARLQPCFAGCHVLNGNGDATGLEWIREAGLLTTPIAITNTHSVGAV RDALIAEERAELGDSGLYWCMPVVMETFDGLLNDIWGQHVGARQVGEALACAESGPVR EGSVGGGTGMICHEFKGGIGSASRRLPAEQGGWTVGALVQANHGQRRELRVDGYPVGR RLGDIPSPFSEEGTPGMGSIVVILATDAPLLPHQCQRLAQRASIGIARTGGGTEDSSG DVFLAFATGNQDLPPADYARKDLPQSTPLRMLNNDHISPLFAAAAEAVEEAIVNVLLA GEDMRTEDGRLVPALKGERLLAALRETGWPGR" misc_feature 1612150..1613172 /locus_tag="PA1486" /note="L-Aminopeptidase D-amidase/D-esterase (DmpA) family; DmpA catalyzes the release of N-terminal D and L amino acids from peptide susbtrates. DmpA is synthesized as a single polypeptide precursor, which is autocatalytically cleaved to the active...; Region: DmpA; cd02253" /db_xref="CDD:239071" misc_feature order(1612312..1612314,1612372..1612377,1612876..1612878, 1612888..1612890,1612897..1612899,1613020..1613025, 1613044..1613052,1613056..1613058) /locus_tag="PA1486" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:239071" misc_feature order(1612327..1612338,1612342..1612350,1612354..1612356, 1612360..1612365,1612372..1612374,1612414..1612416, 1612423..1612425,1612447..1612449,1612513..1612515, 1612897..1612902,1612933..1612947,1613053..1613055, 1613065..1613067,1613074..1613076) /locus_tag="PA1486" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:239071" misc_feature order(1612513..1612515,1612729..1612731,1612834..1612836, 1612948..1612953) /locus_tag="PA1486" /note="active site pocket [active]" /db_xref="CDD:239071" misc_feature 1612831..1612836 /locus_tag="PA1486" /note="cleavage site [active]" /db_xref="CDD:239071" gene complement(1613234..1614649) /locus_tag="PA1487" /db_xref="GeneID:881649" CDS complement(1613234..1614649) /locus_tag="PA1487" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="carbohydrate kinase" /protein_id="NP_250178.1" /db_xref="GeneID:881649" /translation="MRIAALDQGTTSTRVLVASQDGSADIQLALRHQQHHPQSGWVEH DPLELLANLQRCLEASGRVDAIGLANQGESCMAWDARSGEPLSPLIVWQDNRTTPHIE RLRASGAEALVLERSGLPLDAYFSASKLGWIVEHLPAARRALKAGRLRLGTSDAWFLD RLCGTFATDVTTASRTALMNLAEGRWDPDLCALFGVPIECLPEIRDTVGHFGVIGNTP LTASVVDQQASLYGHGCRQPGDAKITFGTGAFALTLSGERIIRSPETGLLATIAWQID GKPVYAMDGGVYDASAAVEWAGRLGLFSDFSELAGFDRPPAIERGLAFVPALSGLACP HWDRSAGAMWLGMDAGTRREDLCQALLEGVVLRSAEVIQAMDGYLKVTDRLSIDGGLA RSPYFAQFLADSLQRRIVTQRFDELTAFGCAALAARGLGHELAEPRNTRTEFQPRVDA GTARRWQVRFSEAVARTRGWR" misc_feature complement(1613258..1614643) /locus_tag="PA1487" /note="ATPase-like domain of the ASKHA (Acetate and Sugar Kinases/Hsc70/Actin) superfamily; Region: ASKHA_ATPase-like; cl49607" /db_xref="CDD:483947" protein_bind 1613813..1613825 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(1613839..1613851) /locus_tag="PA1487" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(1614670..1615908) /locus_tag="PA1488" /db_xref="GeneID:881669" CDS complement(1614670..1615908) /locus_tag="PA1488" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250179.1" /db_xref="GeneID:881669" /translation="MSITEQVDVAIVGSGPAGLAAAIELRRQGVARVCVLERDGEAGG IPRHCAHPPFGLREHGRLLTGPAYAQRNVEQAERAGVDIRLRHSVVALAAAGLLQLAT PEGPRSLRATRVLLATGARETPRSARLLGGDRPLGVINTGALQAYLYLQGLKPFERPL IVGTELVSLSAVMSCRRAGIRPVAMLERNARATARWPLSLFPRLCGVPMHFSSELLEI EGRGRVEAARVRLGDGRVERIACDGILLSGRFVPESSLVRLSHLELDPASGGPRIDQF GRCSDPAYFAAGNLLRPIETAGWSFREGRRIAGLLAADLRAELPSAAPGIAIDCSGPL KLCVPQRLLADPTPGLAHLQLRVSEAASGRLRILADGRPVWERALSCLPERRLLVPLA ALRLPPDTRRLEVAFLTSGH" misc_feature complement(1614970..1615887) /locus_tag="PA1488" /note="Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; Region: TrxB; COG0492" /db_xref="CDD:440258" gene complement(1615895..1617085) /locus_tag="PA1489" /db_xref="GeneID:881656" CDS complement(1615895..1617085) /locus_tag="PA1489" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250180.1" /db_xref="GeneID:881656" /translation="MQEGYREYRDIHARLNLPLLETGALVAAWSDEDLARLPAIVEQA HGNGVDDVRQVGRDEVLALEPQLAGNVLGAVRVPGEHLVDPWSAPLAYLQQALAHGAE ACFDVEVLDGAFDGGEWLLHTRRGDLRASQVINCAGLFGDQLEQRLLGAASFAIHPRK GQFVVFDKAAAALLRHILLPVPNERTKGVVFTRTVFGNLLAGPTAEEQDDREQARVDS DTLQRLIDAAVERIPGLRGMPVTATYAGLRPASEKKEYRIRQVDGRNWISVGGIRSTG LTAALGIARHVYRLYQGERFHEAVREPLWPQVPNLAEHLPRDWQRPGYDEIVCHCEMV TRREILAALEGPLPAGDFGGLKRRTRACMGRCQGFYCNARVAELSAGRLAQPLATGSC HEHH" misc_feature complement(1616171..1617079) /locus_tag="PA1489" /note="L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; Region: LhgO; COG0579" /db_xref="CDD:440344" misc_feature complement(1615946..1616110) /locus_tag="PA1489" /note="bacterioferritin-associated ferredoxin (BFD)-like [2Fe-2S]-binding domain of anaerobic glycerol 3-phosphate dehydrogenase subunit A, hydrogen cyanide synthase subunit B, and similar proteins; Region: GlpA-like_Fer2_BFD-like; cd19946" /db_xref="CDD:381079" gene complement(1617489..1618265) /locus_tag="PA1490" /db_xref="GeneID:881678" CDS complement(1617489..1618265) /locus_tag="PA1490" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250181.1" /db_xref="GeneID:881678" /translation="MRPEERRRHILELLRQRERISVDELARTLSTSQETIRRDLAALA EQGLVSKFHGGAALPPSGEHENAFQTRMNEHAQEKRAVARYAAGLFGPGDSIFIDTGT TTLLFARELARQSHLTVITNSLLIAGSVGASGNRAFMIGGEYRPESEQNVGALAIEQI ARFNAEHAVITVGALNGDGAMDFSIEEAEIARAMIAQARQLTVIADSSKLGRRALFQV FPLSRINRLVVDRKPTGELWEALQQARVEVHEAPLRTPQA" misc_feature complement(1617510..1618265) /locus_tag="PA1490" /note="DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family [Transcription, Carbohydrate transport and metabolism]; Region: GlpR; COG1349" /db_xref="CDD:440960" gene 1618612..1619847 /locus_tag="PA1491" /db_xref="GeneID:881692" CDS 1618612..1619847 /locus_tag="PA1491" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_250182.1" /db_xref="GeneID:881692" /translation="MAEFGNYVIYLIMLGAVLGALASILRPESGLGREFVNGIHAIGP VFLAQAGIMVAIPYLSKAISHALGPFFQTLGSDVSIAALSIIAVDMGGYQLADALTAN RDMWITAMLVGYTSGATIVYLIPVGLTMLERKDHKYLALGAMAGLISIPFAVLAALLL ITLNHIPVRELVSTGSPALHYLSLDFLDMLRLLAPLFVFCFLLAAGLKYRATAMVTGF LVFGKVMDAFIKMALALSIVQHFTGVFTKVFGGWGFDPMFADEKELFRAIEIAGYIGI MLAGTFPICYLFQRYCKRPMAVLGRYLGLSQPGATAFVMVLANIIATYHLFKYMNARD KVLCVALGVCAQATIGDHLAFTANFQPTLILPILLGKLFGGLLAVFIAIRISVPAAER YARQEQEHDEAEKSALHAA" misc_feature 1618615..1619811 /locus_tag="PA1491" /note="ethanolamine utilization protein EutH; Provisional; Region: PRK15086" /db_xref="CDD:237906" gene 1619907..1620263 /locus_tag="PA1492" /db_xref="GeneID:881689" CDS 1619907..1620263 /locus_tag="PA1492" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250183.1" /db_xref="GeneID:881689" /translation="MRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVS MSHPINLCLAELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEA GGQRVSLWSEVEHEFR" misc_feature 1619910..1620242 /locus_tag="PA1492" /note="Domain of unknown function (DUF1937); Region: DUF1937; pfam09152" /db_xref="CDD:430436" gene complement(1620345..1621343) /gene="cysP" /locus_tag="PA1493" /db_xref="GeneID:881623" CDS complement(1620345..1621343) /gene="cysP" /locus_tag="PA1493" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="sulfate ABC transporter substrate-binding protein" /protein_id="NP_250184.1" /db_xref="GeneID:881623" /translation="MKRLFSASLLAAGLALGGAAHAAQPLLNVSYDVMRDFYKEYNPA FQKYWKAEKGENITIQMSHGGSSKQARSVIDGLPADVITMNQATDIDALADNGGLVPK DWATRLPNNSAPFTSATVFIVRKGNPKALKDWPDLLKDGVQVVVPNPKTSGNGRYTYL SAWGYVLKNGGDENKAKEFVGKLFKQVPVLDTGGRAATTTFMQNQIGDVLVTFENEAE MIAREFGRGGFEVVYPSVSAEAEPPVAVVDKVVEKKGSRAQAEAYLKYLWSDEGQTIA ANNYLRPRNPEILAKFADRFPKVDFFSVEKTFGDWRSVQKTHFIDGGVFDQIYSPN" misc_feature complement(1620351..1621268) /gene="cysP" /locus_tag="PA1493" /note="ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: Sbp; COG1613" /db_xref="CDD:441221" gene complement(1621472..1623127) /locus_tag="PA1494" /db_xref="GeneID:881859" CDS complement(1621472..1623127) /locus_tag="PA1494" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250185.1" /db_xref="GeneID:881859" /translation="MNRLAASPLLFAGLFASAPLLAAPQAVDSRISAVTVYADRAVVT RTARLQLPKGQHEIALEQLPFQLDDASLRASLGASAAATLLDVSSAAQRVERPDDNRV QQLDQQLREIDRQLREIHDRGSVLEAQKKFLADIQSGSTQPGKDRPMPGIDELKSLLQ LTEGNLERLLAEQRQLDDRAAELEQRKQQLQEQRGTLNGDGKRFKRAVLRVALEQPAQ VEVKLDYTLRDASWQPTYDARLRDGAKTIELTYQGLVRQSSGEDWTDVDLTLSTARPA LGGNVPRLNPWIVDIDAPNAYYGAEMAMQDVPAPMPQAAPIARTSAKMAMPAPAPKLA EARLATAEVSSGAASASFHIPVPATLNSDGSAQKVTIARLEMPAKLRYLAAPALRETA YLEAETRNDSDYPLLPGTLNTFLGNSFVASGHLRGVMPGESFELALGADEGIGIERKL VKRYTDSSGLIGNRTRVNYEFRIDVRNNHKNAERVQFEDQLPVSRNEQIQVTLLEPKA QEVKREDDGKLKWDWTLQPGEKRSATLKFSVEYPKDLAVSGLD" misc_feature complement(1621484..1623040) /locus_tag="PA1494" /note="conserved hypothetical protein; Region: TIGR02231" /db_xref="CDD:274045" gene complement(1623251..1623877) /locus_tag="PA1495" /db_xref="GeneID:881646" CDS complement(1623251..1623877) /locus_tag="PA1495" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250186.1" /db_xref="GeneID:881646" /translation="MGSLDRQRWDALWQRLGGNPPADAFDALLAAYGGADRHYHSDRH ILACLEHFDRWRQLARRPDLVELALWTHDLVYDTQRQDNEAASAASTERWLDQAGLAA LRPALRELIMATCHQAPPGDADAALVVDLDLAILAAPAPVYARYEADVRAEYAWVPEP LFRAGRGKLLRQLLEQPALYHCEPLRQRWEAAARANLRGALERLEQPA" misc_feature complement(1623257..1623862) /locus_tag="PA1495" /note="Predicted metal-dependent phosphohydrolase, HD superfamily [General function prediction only]; Region: COG4339" /db_xref="CDD:443480" gene complement(1623864..1624715) /locus_tag="PA1496" /db_xref="GeneID:881708" CDS complement(1623864..1624715) /locus_tag="PA1496" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="potassium channel" /protein_id="NP_250187.1" /db_xref="GeneID:881708" /translation="MSAPDSWRERLYIVIFQTDTRDGRRFDSALLLVILASLLVVMID SIDEIHQDYGDLLAYIEWGFTGIFLVEYLLRLYCSPKPLRYAFSFYGLVDLLAILPGF LALLYPDAQYLLIVRVIRMLRIFRVLKLRQYLSQANFLLTALRGSKQKIIVFFLTVMT LVTVFGALMYVVEGPEHGFTSIPRGIYWAIVTLTTVGFGDITPKTPLGQAIASLVMLT GYSIIAVPTGIFTAELATAMRQDPANLLQRDCPVCRKATHEVQAAFCCRCGNPLFPRE EGSHGKS" misc_feature complement(1623996..1624592) /locus_tag="PA1496" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" gene complement(1624781..1625695) /locus_tag="PA1497" /db_xref="GeneID:881639" CDS complement(1624781..1625695) /locus_tag="PA1497" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_250188.1" /db_xref="GeneID:881639" /translation="MPLQSLLNASRILLRGISQVFLQGDPRLGLACLLAIAVGAPPLL AGALLGGALGPLLARLLHCADSDIEAGLYGYNAVLIGMLLAFRFAWSPGLVSLVALGC LASVALQRLFLHGLRRRRWLPPYTLGFVLNGWWLVPLGAWLGLAPAAHGGCFSCAWSG TAELAALTLGIGEIIFLGEPLAGLLVWLGLLLVSRPSAAWALAGAAASLPLAWLLGYD WASALAGFYGLNAALAGLALALRYRSVWPPLLGMVLAVALQPLFGLLGLPALTAPFIL ACLLCIGGERLYLRLAGSLGARLGRRRS" misc_feature complement(1624835..1625686) /locus_tag="PA1497" /note="Urea transporter [Amino acid transport and metabolism]; Region: Utp; COG4413" /db_xref="CDD:443533" gene complement(1626062..1627495) /gene="pykF" /locus_tag="PA1498" /db_xref="GeneID:881682" CDS complement(1626062..1627495) /gene="pykF" /locus_tag="PA1498" /EC_number="2.7.1.40" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="pyruvate kinase" /protein_id="NP_250189.1" /db_xref="GeneID:881682" /translation="MTADKKAKILATLGPATRSRDDIRALVEAGANLLRLNFSHGDYA DHAQRFAWVREVEAELNYPIGVLMDLQGPKLRVGRFAAGAVQLQRGQTFTLDLSDAPG DERRVNLPHPEIIHALEPGMSLLLDDGKIRLEVVNCHSDAIETRVAVGGELSDRKGVN VPEAVLQLSPLTDKDRRDLAFGLELGVDWVALSFVQRPEDIDEARGLIGDKAFLMAKI EKPSAVSAIEAIAERADAIMVARGDLGVEVPAESVPGIQKRIVQVCRQLGKPVVVATQ MLESMRFSPAPTRAEVTDVATAVGAGADAVMLSAETASGQYPREAVEMMAKIVRQVEA EPDYHVQLEVNRPQPDATVSDAISCAIRRVSRILPVAVLVNYTESGNSTLRAARERPK APILSLTPNLRTARRLTVAWGVYSVVNEQLAHVDEICSTALDIALAQRMARRGDTVVV TAGVPFGRPGSTNMLRIETVAPPLGDL" misc_feature complement(1626068..1627495) /gene="pykF" /locus_tag="PA1498" /note="pyruvate kinase; Provisional; Region: PRK06247" /db_xref="CDD:180487" misc_feature complement(order(1626257..1626265,1626269..1626271, 1626275..1626280,1626287..1626289,1626320..1626322, 1626326..1626328,1626332..1626334,1626488..1626493, 1626497..1626499,1626584..1626586,1626590..1626592, 1626686..1626688,1626698..1626703,1626755..1626757, 1626887..1626889,1626908..1626910,1626932..1626934, 1626977..1626991,1626998..1627000,1627016..1627021, 1627268..1627279,1627301..1627303,1627307..1627309, 1627475..1627480)) /gene="pykF" /locus_tag="PA1498" /note="domain interfaces [active]" /db_xref="CDD:238178" misc_feature complement(order(1626671..1626673,1626767..1626769, 1626839..1626841,1626845..1626847,1626914..1626916, 1627289..1627291,1627385..1627387,1627391..1627393)) /gene="pykF" /locus_tag="PA1498" /note="active site" /db_xref="CDD:238178" gene complement(1627497..1628762) /locus_tag="PA1499" /db_xref="GeneID:881633" CDS complement(1627497..1628762) /locus_tag="PA1499" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250190.1" /db_xref="GeneID:881633" /translation="MSTDPRAFLTELFNTAVAAGHPYQVLADHLPEDRSGRAIVIGAG KAAGAMAEVVEKHWQGEIQGLVVAPYRYGAQCSRIEVVEASHPVPDDAGERVARRVLE LISGLNESDRVIFLLSGGGSALLSLPAEGIGLADKQAVNKALLKSGAAIGEMNCVRKH LSAIKGGRLAKACWPASVYTYAISDVPGDEATVIASGPSVGDPTTSADALAILKRYAI DVPQNVLDWLADPRSETVKPDDPCLARSHFQLIATPQNALDAAAVKCRAAGFSTLILG DLEGEAREVAKVHAGIARQIRKHGQPLAAPCVILSGGETTVTVRGNGRGGRNAEFLLS LTAELKGEPNIWALAGDTDGIDGSEDNAGALMTPCSHARGEKAGLKIRDELYDNNGYG YFQALGDLLVTGPTRTNVNDFRAILILES" misc_feature complement(1627509..1628759) /locus_tag="PA1499" /note="Glycerate-2-kinase [Carbohydrate transport and metabolism]; Region: GckA; COG2379" /db_xref="CDD:441946" gene complement(1629059..1629949) /locus_tag="PA1500" /db_xref="GeneID:879491" CDS complement(1629059..1629949) /locus_tag="PA1500" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="2-hydroxy-3-oxopropionate reductase" /protein_id="NP_250191.1" /db_xref="GeneID:879491" /translation="MAKIGFIGTGIMGKPMAQNLQKAGHSLFLSTHHDAAPADLLEAG AIALANPKEVAQEAEFIIVMVPDTPQVEDVLFRKDGIAEGAGPNKVVIDMSSISPTAT KGFAEKIKATGAQYLDAPVSGGEVGAKAATLSIMVGGCPNTFERALPLFQAMGKNITR VGGNGDGQTAKVANQIIVALNIQAVAEALLFAARNGADPAKVREALMGGFASSRILEV HGERMVKGTFDPGFRISLHQKDLNLALAGARELNLNLPNTANAQQVFSTCAAIGGSNW DHSALIKGLEHMANFSIRDE" misc_feature complement(1629071..1629943) /locus_tag="PA1500" /note="tartronate semialdehyde reductase; Provisional; Region: garR; cl42929" /db_xref="CDD:456274" gene complement(1630024..1630806) /locus_tag="PA1501" /db_xref="GeneID:879362" CDS complement(1630024..1630806) /locus_tag="PA1501" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250192.1" /db_xref="GeneID:879362" /translation="MPRFCANLSMLFTEVDFLERFDAAAKAGFAGVEYLFPYDVEAEA IKARLEANGLEQVLFNLPAGDWAKGERGIACHPDRVQEFREGVDKAIAYARVLGNRQV NCLAGIRPQGHDCASVEKTFVDNLRYAADKLEAAGIRLVMEMINTLDIPGFYLQNTRQ ALEIRDKVGSANLFLQYDIYHMQIMEGDLARTLENQLAAINHVQLADNPGRHEPGTGE INYRFLFEHLDRIGYQGWIGCEYKPATTTEAGLGWMKTHNVV" misc_feature complement(1630042..1630803) /locus_tag="PA1501" /note="hydroxypyruvate isomerase; Region: OH-pyruv-isom; TIGR03234" /db_xref="CDD:163190" gene complement(1630902..1632677) /gene="gcl" /locus_tag="PA1502" /db_xref="GeneID:879454" CDS complement(1630902..1632677) /gene="gcl" /locus_tag="PA1502" /EC_number="4.1.1.47" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glyoxylate carboligase" /protein_id="NP_250193.1" /db_xref="GeneID:879454" /translation="MARMRAIEAAVLVMRREGVDTAFGVPGAAINPMYAALKKIGGID HVLARHVEGASHMAEGYTRTKAGNIGVCIGTSGPAGTDMITGLYSASADSIPILCITG QAPRARLHKEDFQAVDISSIAAPVAKWATTVLEPAQVPYVFQKAFQLMRSDRPGPVLI DLPFDVQMAEIEFDIDAYEPLPVSKPKATRVQAEKVLAMLDEAERPLLVAGGGIFNAD AAERFREFAELTGIPVIPTLMGWGVIPDDHPQMAGMVGLQTSHRYGNATLLESDLVLG IGNRWANRHTGSVEVYTEGRRFIHVDIEPTQIGRVFMPDLGIVSDAGAALDAFLEVAR EWKAAGKLKSRAAWLESCQQRKRTLQRKTHFDNVPVKPQRVYEEMNEFFGKDACYVST IGLSQIAGAQFLHVYQPRHWINCGQAGPLGWTIPAALGVVKADPSRQVVALSGDYDFQ FMIEELAVGAQFKLPYIHVLVNNSYLGLIRQAQRGFDMDYCVQLAFDNINAPELEGYG VDHVAVVEGLGCKAIRVFDPNEIGAALAKARELMQQHQVPVVVEVILERITNISMGTE INAINEFEELAEKGADAPTAISLLD" misc_feature complement(1630911..1632674) /gene="gcl" /locus_tag="PA1502" /note="Glyoxylate carboligase [Secondary metabolites biosynthesis, transport and catabolism]; Region: Gcl; COG3960" /db_xref="CDD:443160" gene 1633006..1633437 /locus_tag="PA1503" /db_xref="GeneID:879315" CDS 1633006..1633437 /locus_tag="PA1503" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250194.1" /db_xref="GeneID:879315" /translation="MTTISLETALGITRQALAVGRELSTAPLTIAVLDAGGHLVALQR EDGASMLRPQIAIGKAWGAVALGKSSRLLAADAQQRPSFISAVNTLAHGNLVPAPGGV LIRNDKAEVVGAVGISGDTSDIDEQCAIQGVLAVGLVPDAG" misc_feature 1633006..1633416 /locus_tag="PA1503" /note="Heme-binding protein HbpS, GlcG/HbpS family [Signal transduction mechanisms]; Region: GlcG; COG3193" /db_xref="CDD:442426" gene complement(1633842..1634492) /locus_tag="PA1504" /db_xref="GeneID:883051" CDS complement(1633842..1634492) /locus_tag="PA1504" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250195.1" /db_xref="GeneID:883051" /translation="MTSIRERNKRLILRAASEEFADKGFAATKTSDIAARAGLPKPNV YYYFQSKENLYRCVLESIVEPLLQASAPFRVEDDPLLALPAYIRSKIRISRELPHASK VFASEIMHGAPHLPKEYLDELNAQAQRNVTCLQTWIDRGQLAPVDPHHLLFAIWAATQ TYADFDWQISIVTGKEQLSDADYDAAVETITRLVLKGCTPDGQSGKSAGRLRPLPL" misc_feature complement(1634325..1634459) /locus_tag="PA1504" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:425684" misc_feature complement(1633890..1634318) /locus_tag="PA1504" /note="YcdC-like protein, C-terminal region; Region: TetR_C_3; pfam08362" /db_xref="CDD:429946" gene 1634728..1635723 /gene="moaA2" /locus_tag="PA1505" /db_xref="GeneID:883031" CDS 1634728..1635723 /gene="moaA2" /locus_tag="PA1505" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cyclic pyranopterin monophosphate synthase" /protein_id="NP_250196.1" /db_xref="GeneID:883031" /translation="MSDSRLVDPFGRRITYLRLSVTDRCDFRCTYCMSEDMQFLPRDQ VLSLEELYAVADAFIGLGVRRIRITGGEPLVRKGITGLLARLGQRAELEDLAITTNGS QLRERAAELKAAGVRRLNVSLDSLQRERFAAFTRSDRLEQVLDGIQAAREAGFERIKL NCVVQKGRNDDEILDLVEYALANQLDISFIEEMPLGSITSHRRELTLCTSDEVRAIIE RRWPLTPSLARSGGPSRYYQIGDEPSRIGFISPHSNNFCGDCNRVRVTAEGKLVLCLG HEGALDLRELLRSHPGDRERLSAALVAALNLKPERHHFDAQEQVQVLRFMSMTGG" misc_feature 1634737..1635720 /gene="moaA2" /locus_tag="PA1505" /note="GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA) [Coenzyme transport and metabolism]; Region: MoaA; COG2896" /db_xref="CDD:442141" gene 1635908..1636237 /locus_tag="PA1506" /db_xref="GeneID:883047" CDS 1635908..1636237 /locus_tag="PA1506" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250197.1" /db_xref="GeneID:883047" /translation="MHRVLFICSRNRLRSPSAERLFADWPGVETDSAGLAADAETPLE REQLEWATLVVVMERRHRQALLRRHAAAMKGKRLVCLDIPDDYAYMQAELLHLLERKA GPFLRRD" misc_feature 1635908..1636234 /locus_tag="PA1506" /note="Predicted protein tyrosine phosphatase [General function prediction only]; Region: COG4551" /db_xref="CDD:443615" gene complement(1636329..1637696) /locus_tag="PA1507" /db_xref="GeneID:879470" CDS complement(1636329..1637696) /locus_tag="PA1507" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_250198.1" /db_xref="GeneID:879470" /translation="MSVVTDRRIPDSPVDQRLPLTQLLLVGFQHVLLMYGGAVAVPLI VGQAAGLSREEIAFLINADLLVAGIATLVQSLGIGPMGIRMPVMMGASFAAVGSMVAM AGMPGVGITGIFGATIAAGFFGMLIAPFMSRIVRFFPPLVTGTVITSIGMCLFPVAIN WAGGGKGAEDFGSLHFLFLSSLVLCTILLINRFMRGFWVNISVLMGMGLGYAIAGGMG MVDLGGLAERPWFDIVTPLHFGAPTFDLAPILSMCLVVVIIFVESTGMFLALGKITGR EITPTELRRGLLCDAGASFFAGFLNTFTHSSFAQNIGLVQMTGVRSRYVTVAAAGFLI LLSMLPKAAFLVASIPPAVLGGAGIAMFGMVAASGIQILHEANITDRRNQLLVAVSIG MGMVPVVRPDFFARLPVWMEPITHSGIAMTAIWAVVLNLLFNILSRNDRSHLCGSHAP APKHS" misc_feature complement(1636395..1637618) /locus_tag="PA1507" /note="xanthine permease; Region: pbuX; TIGR03173" /db_xref="CDD:274468" gene complement(1638379..1638639) /locus_tag="PA1508" /db_xref="GeneID:883107" CDS complement(1638379..1638639) /locus_tag="PA1508" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250199.1" /db_xref="GeneID:883107" /translation="MDIIRLGDTTSHGGTVIEAFGQTDLNGKPMAGVGHQVVCPLCKG TFPITEGSALLDVNGVPVALHGMKTACGASLIASGPLGAAEN" misc_feature complement(1638406..1638633) /locus_tag="PA1508" /note="proline-alanine-alanine-arginine (PAAR) domain with uncharacterized C-terminal extension; Region: PAAR_CT_2; cd14744" /db_xref="CDD:269829" misc_feature complement(order(1638448..1638459,1638544..1638555, 1638628..1638633)) /locus_tag="PA1508" /note="PAAR motifs; other site" /db_xref="CDD:269829" gene complement(1638652..1639794) /locus_tag="PA1509" /db_xref="GeneID:879385" CDS complement(1638652..1639794) /locus_tag="PA1509" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250200.1" /db_xref="GeneID:879385" /translation="MMHPRRLLAVLGVVVLTSMTSCTSFSSSRSSSMDKTGWITHCFG RFLIDLPPDAVINAGYYLWGDRIEYLDDKPTELAARVDRLEQEWRTQRHKSKGNMFLR KIDFGNESVGLLSWSSEVASKTYLLDTYVTSKPTWHVYRWKGKVSVDREQHAVEISRA LARNLRSRAPKEIPSEPGFCIDHAYIAGDSFQVERFGVGVTFPEHPGARFEFRSSTGA ELNSLLERVDGFVQNMLSTFAGMETLRKGKHPVGSLPGEEYLVAGSDKGQRGYTFMWE VQGKEESLTEPNLTAGLAVLERSNENGKPPPPAFKSDKEALELWDTIVDSIRVRPTSS SPRGGNAGPSPAPKPATPGGQTLGDHYVYEEFLSSLKPKDSWLDDL" misc_feature complement(<1639402..1639677) /locus_tag="PA1509" /note="Tle cognate immunity protein 4 N-terminal domain; Region: Tli4_N; pfam18443" /db_xref="CDD:436506" misc_feature complement(1638799..1639281) /locus_tag="PA1509" /note="Tle cognate immunity protein 4 C-terminal domain; Region: Tli4_C; pfam18426" /db_xref="CDD:436493" gene complement(1639791..1641500) /locus_tag="PA1510" /db_xref="GeneID:879265" CDS complement(1639791..1641500) /locus_tag="PA1510" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250201.1" /db_xref="GeneID:879265" /translation="MSSEPLEPNQDVIIPRSRDSLGRPVYKAQLTRTDNQSEKVALIR QTAPLPVIFIPGIMGTNLRNKADKSEVWRPPNGLWPMDDLFASIGALWTWAWRGPKAR QELLKAEQVEVDDQGTIDVGQSGLSEEAARLRGWGKVMRSAYNPVMGLMERRLDNIVS RRELQAWWNDEALSPPGDQGEEQGKVGPIDEEELLRASRYQFDVWCAGYNWLQSNRQS ALDVRDYIENTVLPFYQKECGLDPEQMRRMKVILVTHSMGGLVARALTQLHGYERVLG VVHGVQPATGSSTIYHHMRCGYEGIAQVVLGRNAGEVTAIVANSAGALELAPSAEYRE GRPWLFLCDAQGQVLKDIDGKPRAYPQNQDPYEEIYKNTTWYGLVPEQNSQYLDMSDK KEGLRVGPRDNFEDLIDSIANFHGELSAAGYHSETYAHYGADDSRHSWRDLIWKGDPT PLETPGATLNDDENGTYNSWFRRGLPTIVQGPLETGNPLDASGSGGDETVPTDSGQAP ALAGVKASFRHGSKGKGQANTKRGYEHQESYNDARAQWAALYGVIKITQLADWHPNDK GGT" misc_feature complement(1640667..>1640927) /locus_tag="PA1510" /note="Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and metabolism]; Region: EstA; COG1075" /db_xref="CDD:440693" protein_bind complement(1639813..1639825) /locus_tag="PA1510" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="'Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1509, PA1510'" /bound_moiety="AmrZ" gene complement(1641497..1644025) /locus_tag="PA1511" /db_xref="GeneID:883127" CDS complement(1641497..1644025) /locus_tag="PA1511" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250202.1" /db_xref="GeneID:883127" /translation="MRQRDLKFTFVVGEGKLAFDVVEFELEEALCEPFRLNLKLASDK NAIDFRQVLDQPGTFTLWQDGRPARYVHGIVSHFTQGSSGFRRTRYELLLEPQLARLE LCCNWRIFQEKSVPEILQALLKEHRVLDYEQRIYHEHLPREYCVQAGDSDHYLHDRLA FEEGLVYYFRFDEHRHTLVCSDRLYVQERIAGGPVLFSAQPEGDNPQPVLHSFRYSEN VRTARQTQRDYSFKRPTYDQEHHLAGEALEHQGSSYERYDYPGRYKRSGAGRPFSESR LRGHRRDARVASVSGDDPRLIPGHAFALEGHPRADFNAWWRPVRVVHRGTQYAGQEEE SADAPLGVSYDLRAELVPEDVEWRPAPLPRPRIDGPQIATVVGPAGEEIHCDEWGRVK VQFPWDREGRHDEFSTCWIRVAQNWAGADWGHMAIPRIGQEVIVDYLDGDCDQPIVTG RTYRATNRPPYALPDHKILSTIKSKEYKGSRANELRIDDTTAQISAALMSDHGASALH LGYLTHPRPEGGKPRGEGFELRTDEHGAVRAAKGLLLSTEEQLRAGAGHLDRGVVVQV LEAALKLARELGDYAGEHQGVGHDAAPQQTLQEAVRDLGHGANDESGKSNGGKPAIAL SGPAGIAAATPASLTLAAGEHVDSVARQNQQVTAGQKVVINAGSDIGLFAQGGELRQI THQGPMLLQAQKNDIRLEAEQSVEVSASQQHVLVTAKEHITLMCGGAYLTLKGGNIEL GMPGNFVVKAAKHSHVGPAHASTSFNAWDSTPFDDRYVLRDEATLEPLPNIAVEVIRG DGGVVKLMTDSQGRLPKQQHLAMDPVQIRILGKGSHNSDTESNT" misc_feature complement(1641866..1644025) /locus_tag="PA1511" /note="Uncharacterized conserved protein VgrG, implicated in type VI secretion and phage assembly [Intracellular trafficking, secretion, and vesicular transport, Mobilome: prophages, transposons, General function prediction only]; Region: VgrG; COG3501" /db_xref="CDD:442724" gene complement(1644207..1644725) /gene="hcpA" /locus_tag="PA1512" /db_xref="GeneID:883081" CDS complement(1644207..1644725) /gene="hcpA" /locus_tag="PA1512" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="secreted protein Hcp" /protein_id="NP_250203.1" /db_xref="GeneID:883081" /translation="MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGF NHEVIIPRDPQSGQPTGQRVHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYRTS AAGTQEHYYTTVLEDAIIVDIKDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGT SGSDDWRSPVAG" misc_feature complement(1644219..1644722) /gene="hcpA" /locus_tag="PA1512" /note="type VI secretion system effector, Hcp1 family; Region: VI_effect_Hcp1; TIGR03344" /db_xref="CDD:213799" gene complement(1645211..1646488) /locus_tag="PA1513" /db_xref="GeneID:879285" CDS complement(1645211..1646488) /locus_tag="PA1513" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250204.1" /db_xref="GeneID:879285" /translation="MEAHLIEWLNLLVRWIHMIVGIAWIGASFYFVWLENNLNRSNPR EGLSGDLWAIHGGGIYHLEKYKLAPPKMPENLHWFKWEAYSTWMSGVVLLTIVFYLNP TLYLIAPGSDLAPAAAIAIGIGSLVCGWFVYTILCDSALGKTPALLGLVLFVLLVAAA YGLTQVFSGRGAYLHVGAIIGTIMVGNVFRVIMPAQRALVKAIEENREPDPVLPAKGL LRSRHNNYFTLPVLFIMISNHFPSTYGSQYNWLILAAIAVLAVLVRHYFNTRHESNRF AWALPAGALGMIALAFVTTPNYQQASAPLASTPAAAPAQPATGGDAPAAPAATQASNA GAASGADFDKVHHVIQERCTVCHSAKPTSQLFSTAPGGIMLDTPQQIQQLAPKIQAQA VASQIMPLGNITQMTQEERNLIGSWIAKGAQIN" misc_feature complement(1645217..1646488) /locus_tag="PA1513" /note="Uncharacterized membrane protein [Function unknown]; Region: COG3748" /db_xref="CDD:442962" gene complement(1646537..1647046) /locus_tag="PA1514" /db_xref="GeneID:879403" CDS complement(1646537..1647046) /locus_tag="PA1514" /EC_number="3.5.1.116" /note="'class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene'" /codon_start=1 /transl_table=11 /product="ureidoglycolate hydrolase" /protein_id="NP_250205.1" /db_xref="GeneID:879403" /translation="MRTLKIEPLTKEAFAPFGDVIETAGSDYFMINNGSTRRYHKLAT VETAQPEDNAIISIFSAEKLEMPLRIRMLERHPLGSQAFIPLLGNPFLVVVAPLGDVP VPGLVRAFLTNGRQGVNYHRGVWHHPVLTIEKRDDFLVVDRSGSGNNCDEHFFTEDEQ LLLDPQSNQ" misc_feature complement(1646558..1647046) /locus_tag="PA1514" /note="ureidoglycolate lyase; Region: PRK03606" /db_xref="CDD:179606" gene complement(1647101..1648099) /gene="alc" /locus_tag="PA1515" /db_xref="GeneID:883130" CDS complement(1647101..1648099) /gene="alc" /locus_tag="PA1515" /EC_number="3.5.3.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="allantoicase" /protein_id="NP_250206.1" /db_xref="GeneID:883130" /translation="MNAEHSPFRHYLDLADARLGSQVVAVSDEWFAPASRMLQAGEPV WKEGVFDDSGKWMDGWETRRKRFEGHDQAVIRLGVPGVLKGVDIDTRFFTGNHPPAAS LDGCFCAEGDPDDSTSWSEVLAAVGLQGDSHHYHPIDDERPWTHLRLNIYPDGGIARL RLYGVPYRDWSNQPPGTALDLAAAVNGGRALACSDQHFGRMGNLLNPGRAINMGDGWE TGRRRTPGHDWVIVALGHPGSIEAAVVDTLHFKGNYPESCSIQAAFVEGGNEARIEAQ SLFWRELLPAQKLEMHQEHRFERHLNALGPITHVRLNIFPDGGVSRLRLFGRPQLP" misc_feature complement(1647116..1648069) /gene="alc" /locus_tag="PA1515" /note="Region: allantoicase; TIGR02961" /db_xref="CDD:274363" gene complement(1648117..1648632) /locus_tag="PA1516" /db_xref="GeneID:877966" CDS complement(1648117..1648632) /locus_tag="PA1516" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250207.1" /db_xref="GeneID:877966" /translation="MSRFQTLTPASLSREAFIEAFADIYEHSPWVAEKAYDLGIDDSL NDIEGLHQRMADILLSASREAQLALINAHPDLAGKAAIRGELTASSTSEQAGAGIHEC SAEEFARFTELNDAYKARFGFPFIKAVKGSNRHQILAAFEERIQHSADEEFATALAEI NKIALFRLQQL" misc_feature complement(1648120..1648599) /locus_tag="PA1516" /note="putative OHCU decarboxylase; Provisional; Region: PRK13798; cl01251" /db_xref="CDD:470134" gene complement(1648629..1649555) /locus_tag="PA1517" /db_xref="GeneID:877650" CDS complement(1648629..1649555) /locus_tag="PA1517" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250208.1" /db_xref="GeneID:877650" /translation="MSADYPRDLIGYGNNPPHPHWPGDARIALSFVLNYEEGGERCVL HGDKESEAFLSEMVAAQPLQGVRHMSMESLYEYGSRAGVWRLLKLFKRRNVPLTVFAV AMAAQRNPEVIRAMVADGHEICSHGYRWIDYQYMDEAQEREHMLEAIRILTELTGQRP VGWYTGRTGPNTRRLVMEEGGFLYDSDTYDDDLPYWDPASTAEKPHLVIPYTLDTNDM RFTQVQGFNNGEQFFQYLKDAFDVLYEEGATAPKMLSIGLHCRLIGRPARMAALERFI QYAQSHDKVWFARREDIARHWHREHPFQETEA" misc_feature complement(1648647..1649543) /locus_tag="PA1517" /note="putative urate catabolism protein; Region: uraD_N-term-dom; TIGR03212" /db_xref="CDD:211797" gene 1649928..1650308 /locus_tag="PA1518" /db_xref="GeneID:879293" CDS 1649928..1650308 /locus_tag="PA1518" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="5-hydroxyisourate hydrolase" /protein_id="NP_250209.1" /db_xref="GeneID:879293" /translation="MSASGRPQPMGRLTTHVLDSAHGCPGHGIKIELYRVEGQQLELI ATTLTNHDGRCDQPVLQGEDFRPGVYQLVFNAGDYYRARGVQLPEPAFLDQVVLRFGI ASADDHYHVPLLISPYSYSTYRGS" misc_feature 1649955..1650305 /locus_tag="PA1518" /note="5-hydroxyisourate hydrolase (purine catabolism), transthyretin-related family [Nucleotide transport and metabolism]; Region: HiuH; COG2351" /db_xref="CDD:441918" gene complement(1650549..1651898) /locus_tag="PA1519" /db_xref="GeneID:883016" CDS complement(1650549..1651898) /locus_tag="PA1519" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_250210.1" /db_xref="GeneID:883016" /translation="MESTKQEEQGIYAATPPATGLLERLFKLRQHGTTVRTELAAGLT TFITMAYIIFVNPNIMADAGIDHGAAFVATCLAAALGCFLMGLYANWPVGLAPGMGLN AFFTYTVVGTMGYSWQIALGAVFISGVMFMLLTFSRVREWLLNSIPRSLRFAMGAGVG LFLGLIGLKTAGIVVASPATLIKLGHLTSPGPLLAALCFLMIAVLEYRRVFGGILISI LSVTLVGWALGLVQYGGVFSAPPSLAPTFLAMDIAGAFNVTMISVILAFLFVHMFDTA GTLMGVAQRAHLVKEDGRIENLSKAMKADSASSVFGGMLGVPPVTSYVESAAGVAAGG RTGLTAVVVGVLFVAAMFFAPLAGMIPAFATAGALIYVAMLMMGGMAHIDWDEHTETI PAIVTVIMMPLTFSVADGIALGFITYVAMKVLTGKHREVSASLYALFVIFVAKFIFL" misc_feature complement(1650552..1651844) /locus_tag="PA1519" /note="Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 (NCS2) family [Nucleotide transport and metabolism]; Region: NCS2; COG2252" /db_xref="CDD:441853" gene 1652273..1653052 /locus_tag="PA1520" /db_xref="GeneID:883099" CDS 1652273..1653052 /locus_tag="PA1520" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250211.1" /db_xref="GeneID:883099" /translation="MTDQLQHIRKPPRTGKAARSGTQDEIVYAHIFDAILEQRLAPGT KLSEEALGEIFGVSRTIIRRALSRLAHEQVVLLRPNRGAVVASPSIDEARQILFARRT VERAITELATDNATAERLAELREMVVQEQSSFARGDRGAGIRLSGEFHLKLAEMARNA PLVSFQRSLVSQTSLIIAQYESGGRSHCSFDEHNEILDAIEKGDKERAVTLMMHHMEH IDSKLNLESDNASGDLHAVFSHLLGGKKKPRRAKADSDSAA" misc_feature 1652318..1652929 /locus_tag="PA1520" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: GntR; COG1802" /db_xref="CDD:441407" gene complement(1653106..1654410) /locus_tag="PA1521" /db_xref="GeneID:883114" CDS complement(1653106..1654410) /locus_tag="PA1521" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="guanine deaminase" /protein_id="NP_250212.1" /db_xref="GeneID:883114" /translation="MTRNAKAYRAAILHSIADPAEVGVERSYEYFEDGLLLVEDGKVA RLGDAETLLGEIGEVEVFEYRDALITPGFIDTHIHFPQTGMIASYGEQLLDWLNTYTF PTERQFGDQAHADQVAEIFLQELLRNGTTTALVFGSVHRQSVESLFEAARRLDLRLIA GKVMMDRNAPDYLTDTAESSYRDSKALIERWHGQGRLLYAVTPRFAPTSTAEQLDMAA RLLREHPGVYLHTHLSENLKEIEWVKELFPERSGYLDVYDHHGLLGPRSVFAHGVHLC DGECQRLAETGSAVAFCPTSNLFLGSGLFDLPKLERYKVKVGLGTDVGAGTSFSQLQS LNEAYKVMQLQGARLDPFKSLYLATLGGARALELDDRIGSFATSNEADFVVLDYHATP LLSYRLSQAGSLAERLFALTILGDDRTVKETFAAGRSVHRRD" misc_feature complement(1653109..1654395) /locus_tag="PA1521" /note="guanine deaminase; Provisional; Region: PRK09228" /db_xref="CDD:236419" gene complement(1654480..1655319) /locus_tag="PA1522" /db_xref="GeneID:883006" CDS complement(1654480..1655319) /locus_tag="PA1522" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250213.1" /db_xref="GeneID:883006" /translation="MNWISALAELQRSGEPCVLVTIIEERGSTPRNAGSKMVVSAERL YDTIGGGHLEYRAQAIAREMLAARTQDTRLERFSLGASLGQCCGGATVLLFEPMGQPQ AHIAVFGAGHVGRALVPLLASLPCRVRWIDSREHEFPALLPDGVEKVVNDEVLDEVER MPPGSHFIVMTHNHPLDLELTAAILARNDFAYFGLIGSKTKRVKFEHRLRERGVDAER LQRMRCPMGLEQVKGKLPAEIAISIAGEVIATYNAAFGLERKQGPSSVTRLTPESRRA HES" misc_feature complement(1654576..1655268) /locus_tag="PA1522" /note="xanthine dehydrogenase accessory protein XdhC; Region: xanthine_xdhC; TIGR02964" /db_xref="CDD:274366" gene complement(1655346..1657745) /gene="xdhB" /locus_tag="PA1523" /db_xref="GeneID:879250" CDS complement(1655346..1657745) /gene="xdhB" /locus_tag="PA1523" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="xanthine dehydrogenase" /protein_id="NP_250214.1" /db_xref="GeneID:879250" /translation="MSNHRKPHKSQEELADLFRAELTTGVGRSVKHESAPKHVSGEAI YIDDRLEFPNQLHVYARLSERAHARITRLDVTPCYQFPGVAIALTAADVPGQLDIGPV VAGDPLLADGKVEYVGQMVLAVAADSLETARKAAMAAIVEYEDLEPVLDVVEALRKRH FVLDSHQHRIGDSAAALAGAPHRLQGTLHIGGQEHFYLETQISSVMPSEDGGMIVYCS TQNPTEVQKLVAEVLGVSFNRIVIDMRRMGGGFGGKETQAAAPACLCAVVAYHTGRPA KMRLPRMEDMQITGKRHPFYVEYDVGFDDDGRLHGIQIDLAGNCGYSPDLSGSIVDRA MFHSDNAYFLGNATINGHRCKTNTASNTAYRGFGGPQGMVAIEEIMDAVARSLGKDPL EVRKLNYYGKDERNVTHYHQTVEHNLLAEMTAELEASSEYARRREEIRAFNAASPVLK KGLALTPVKFGISFTATFLNQAGALIHIYTDGSIHLNHGGTEMGQGLNTKVAQVVAEV FQVDVERIQITATNTDKVPNTSPTAASSGTDLNGKAAQNAAETIKRRLVEFAARHWKV SEEDIEFRNNQVRIRELILPFEELIQQAYFGQVSLSSTGFYRTPKIFYDREQARGRPF YYFAYGAACSEVIVDTLTGEYRMLRTDILHDVGDSLNPAIDIGQVEGGFVQGMGWLTM EELVWNAKGKLMTSGPASYKIPAVADMPLDLRVKLLENRKNPEQTVFHSKAVGEPPFM LGISVWCAIKDAVASLADYRAQPAIDAPATPERVLWGVEQMRRLKAAQAQAADAAVEP A" misc_feature complement(1655400..1657703) /gene="xdhB" /locus_tag="PA1523" /note="Xanthine dehydrogenase, molybdopterin-binding subunit XdhB [Nucleotide transport and metabolism]; Region: XdhB; COG4631" /db_xref="CDD:443669" gene complement(1657738..1659192) /gene="xdhA" /locus_tag="PA1524" /db_xref="GeneID:879268" CDS complement(1657738..1659192) /gene="xdhA" /locus_tag="PA1524" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="xanthine dehydrogenase" /protein_id="NP_250215.1" /db_xref="GeneID:879268" /translation="MIRFLLNREIRVEERLDPNLTVLDYLRRHLGKTGTKEGCASGDC GACTVVVGELVTGEDGAERIRYRSLNSCLTFVSALHGKQLITVEDLKHQDRLHDVQQA MVDCHGSQCGFCTPGFVMSLFALQKNSAGADPAKAHEALAGNLCRCTGYRPILDAAEQ ACCHKRADQFDAREAATIEQLRAIAPRETAELNSGDRRCLLPLTVADLADLYGANPQA RLLAGGTDLALEVTQFHRELPVMIYVGHIREMKRIEVGANCLEIGAATPLTDCYQALA ADYPDFGELLQRFASLQIRNQGTLGGNIGNASPIGDAPPLLIALGAKIVLRRGERRRE LPLEEYFLDYKVTAREEGEFIEKILVPRARPSQAFKAYKVSKRIDDDISAVCAAISLD LEDGRIARARVAFGGMAAIPKRAAACEAALQGARLEAASFERAAAALANDFTPLSDFR ASKEYRLLTAQNLLRKCFLELHAPAVETRVTAYV" misc_feature complement(1657750..1659189) /gene="xdhA" /locus_tag="PA1524" /note="Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and metabolism]; Region: XdhA; COG4630" /db_xref="CDD:443668" gene complement(1659413..1660546) /gene="alkB2" /locus_tag="PA1525" /db_xref="GeneID:879517" CDS complement(1659413..1660546) /gene="alkB2" /locus_tag="PA1525" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alkane-1 monooxygenase" /protein_id="NP_250216.1" /db_xref="GeneID:879517" /translation="MFASLSSAWMLRLKKYGYWIWLIAVLGIPLSYWWSLGSDYPNAW PWLVISVVFGLIPILDAIVGRDPANPEEASEVPEMEAQGYYRVLSLATVPLLLGMLVW SGWILAHETRWDWVGQLGWILSVGTVMGAIGITVSHELIHKDPQLEQNAGGLLLAAVC YAGFKVEHVRGHHVHVSTPEDASSSRYGQSLYSFLPHAYKHNFLNAWRLEAERLKRKG LPALHWRNELIWWYAISALFLLGFSLAFGWLGAIFFLGQSVMAFTLLEIVNYVEHYGL HRRRLDNGRYERTTPEHSWNSNFLLTNLFLFHLQRHSDHHAYAKRRYQVLRHYDSSPQ LPNGYAGMIVLALFPPLWRAVMDPKVRAYYAGEEYQLTDTQRI" misc_feature complement(1659467..1660420) /gene="alkB2" /locus_tag="PA1525" /note="Alkane hydroxylase is a bacterial, integral-membrane di-iron enzyme that shares a requirement for iron and oxygen for activity similar to that of the non-heme integral-membrane acyl coenzyme A (CoA) desaturases and acyl lipid desaturases. The alk genes...; Region: Alkane-hydroxylase; cd03512" /db_xref="CDD:239589" misc_feature complement(order(1659599..1659604,1659611..1659613, 1660028..1660033,1660043..1660045,1660121..1660123, 1660133..1660135)) /gene="alkB2" /locus_tag="PA1525" /note="Di-iron ligands [ion binding]; other site" /db_xref="CDD:239589" gene 1660727..1661386 /locus_tag="PA1526" /db_xref="GeneID:883115" CDS 1660727..1661386 /locus_tag="PA1526" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250217.1" /db_xref="GeneID:883115" /translation="MTFKAPDSLAEQIAHHLAERIIRGELKERERIQEQKVTQTLNVS RGSVREALLILERRHLVNILPRRGAQVSELSPQHVESLYALIVQLYILLAESVARRWR SEAELAPFLVIQQRLLNNLAQSDIDGFVEASFDIMRAAFPFANNPYLQETVENLLPAV SRAYHLALERRKAEMNQFLGSFAQLLQAVIARDEARIREVLLEYGRHNCQLVLAALAE R" misc_feature 1660739..1661383 /locus_tag="PA1526" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: GntR; COG1802" /db_xref="CDD:441407" gene 1661412..1664900 /locus_tag="PA1527" /db_xref="GeneID:879466" CDS 1661412..1664900 /locus_tag="PA1527" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250218.1" /db_xref="GeneID:879466" /translation="MRLKSIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAV RWVMGESSAKNLRGESMTDVIFNGSNTRKPVSQASIELIFDNAETTLVGEYAQYAEIS IRRRVSRDGQNTYFLNGTKCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEARPEDL RNFIEEAAGISKYKERRRETESRIRRTQENLARLTDLREELGRQLERLHRQAQSAEKY QEHKAEERQLKAQLGAVRWRDLNEQVGQRERVIGDQEIAFEALVAEQRGADAGIERLR DGHHELSERFNQVQARFYSVGGDIARVEQSIQHGQQRQRQLQDDLREAERTRQETESH LGHDRTLLATLAEEMAMLAPEQELSAAAAEEAGIALEQAEQGMQAWQQQWDAFNQQSA EPRRQAEVQQSRIQHLEQSLERLQDRERRLQEERGQLAADPEDAAILELNEQVAIAEL ALEELQLQEQGQAERLEQLRQELQQLAAEQHQAQGELQRLNGRIASLEALQQAALDPG QGALEWLREQGLEQRPRLAEGLRVEPGWELAVETVLGADLQAVLLDGFDGLALAGFGK GELRLLSPARGAATAAGSLLDKVRADADLSPWLARVKPVETLEQALAQRGALDDGESL ISRDGYWVGRHFLRVRRSDEAQGGMLARAQELEALQERREALETRVAEGEERLAAARD EQRELEGAREQVRRQVQEEGRRHGELKAQLSAQQAKVEQLVLRRRRLDEEVAELAEQR ALEQEQLSEARLTLQEALDSMALDTERRESLLAERDALRERLDRIRQDARTHKDHAHQ LAVRVGSLKAQHNSTQQALERLDQQSARLNERCEQLNLNLEEGAAPLEELRMKLEELL ERRMAVEDELKQARLALEDADRELREVEKRRGQAEQQSQLLRGQLEQQRLEWQGLVVR RKALQEQLAEDGYDLHTVLANLPLDASERDWEERLESLAARIQRLGPINLAAIEEYQQ QSERKRYLDSQNDDLAEALETLENVIRKIDRETRNRFKETFDQINAGLQALFPKVFGG GTAYLELTGEDLLDTGVAIMARPPGKKNSTIHLLSGGEKALTALALVFAIFQLNPAPF CMLDEVDAPLDDANVGRYARLVKEMSEKVQFIYITHNKIAMEMADQLMGVTMHEPGCS RLVAVDVEEAVALAEA" misc_feature 1661415..1664870 /locus_tag="PA1527" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" protein_bind complement(1664462..1664474) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1528" /bound_moiety="AmrZ" gene 1665065..1665934 /gene="zipA" /locus_tag="PA1528" /db_xref="GeneID:879535" CDS 1665065..1665934 /gene="zipA" /locus_tag="PA1528" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cell division protein ZipA" /protein_id="NP_250219.1" /db_xref="GeneID:879535" /translation="MDIGLREWLIVIGLIVIAGILFDGWRRMRGGKGKLKFKLDRSFA NLPDDDGDSAELLGPARVVEHREPSFDEQDLPSVSAREAKERKGGKRQEEPRQGDLDL DEGLALEADPSDAAETVEPRKGKSKGRKEKEREKAPAVAAEPAPVDEVLIINVIARDE SGFKGPALLQNILESGLRFGDMDIFHRHESMAGNGEILFSMANAVKPGTFDLDDIDNF STRAVSFFLGLPGPRHPKQAFDVMVAAARKLAHELNGELKDEQRSVLTAQTIEHYRQR IIDHERRSLMQKR" misc_feature 1665074..1665895 /gene="zipA" /locus_tag="PA1528" /note="cell division protein ZipA; Region: septum_zipA; TIGR02205" /db_xref="CDD:274030" gene 1666025..1668409 /gene="lig" /locus_tag="PA1529" /db_xref="GeneID:879269" CDS 1666025..1668409 /gene="lig" /locus_tag="PA1529" /EC_number="6.5.1.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NAD-dependent DNA ligase LigA" /protein_id="NP_250220.1" /db_xref="GeneID:879269" /translation="MTDTQAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRE LQALEAEYPQLLTPDSPTQRVSGTPASAFGEVRHEIPMLSLGNAFEEQDLLDFDRRVR EGLADLLPGGDLLGGGAEVEYSCEPKLDGLAVSLLYERGQLVRGATRGDGSTGEDITS NVRTIRNVPLKLHGEGWPEILEVRGEVFMSKAGFEALNAKAVETGGKTFANPRNAAAG SLRQLDSKITASRPLEFCAYGFGQVSGTLPDTQVGILEAFRGWGIPISRELRLVKGAQ ACRDYYDDIGRRRDALAYEIDGVVFKVNRIAFQRELGFRAREPRWAIAHKFPAREELT ELLGVEFQVGRTGAVTPVARLKPVQVAGVTVSNATLHNMDEVARLGLRIGDTVVIRRA GDVIPQVMQVVLERRPADAQAIEVPEHCPVCGSAVERTQLVKRSKGKESISEGAIYRC VGRLSCQAQLKQAIIHFVSRRAMDIDGLGDKIVEQLVDRGLVASPADLYTLTYEQVFE LEGFAELSTNNLLTAIADSRKPSLARFIFALGIPDVGEETAKLLARSLGSLERIGKAL PEVLTYLPDVGAEVAYEIHNFFADEHNRQVIAQLRDAEHGVQLQEEGEVAAEFAACAS LAGFIDKLNIPFIAATGAEKLASRFGSLDGIIRADWLDLRQVERLPERAAKSLRDFFD EPANVQRALAIEAQLREFGMHWQSERKAVEGLPLAGQTWVLTGTLEAMSRDVAKDKLE GLGAKVAGSVSAKTHCVVAGPGAGSKLAKANELGVKVLDEDGLLKLFDEHGVAR" misc_feature 1666025..1668382 /gene="lig" /locus_tag="PA1529" /note="NAD-dependent DNA ligase [Replication, recombination and repair]; Region: Lig; COG0272" /db_xref="CDD:440042" misc_feature 1667906..1668082 /gene="lig" /locus_tag="PA1529" /note="Helix-hairpin-helix domain; Region: HHH_5; cl22429" /db_xref="CDD:473956" gene 1668455..1668832 /locus_tag="PA1530" /db_xref="GeneID:879277" CDS 1668455..1668832 /locus_tag="PA1530" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250221.1" /db_xref="GeneID:879277" /translation="MDKARKQRLLGVLALVVLFGAYVGWSERPRILLHYSGQASAPIA YSYKEQGVETFSGEIRPGQVREFPVKLFGGSDYRIAFSFHRGEEKYASFSTKPGWGTL DLYVDTELSVSTQPPPEGLIQQQ" gene 1668840..1669799 /gene="ffs" /locus_tag="PA1530.1" /db_xref="GeneID:4179188" rRNA 1668840..1669799 /gene="ffs" /locus_tag="PA1530.1" /product="4.5S ribosomal RNA" /db_xref="GeneID:4179188" gene complement(1669086..1669952) /locus_tag="PA1531" /db_xref="GeneID:883076" CDS complement(1669086..1669952) /locus_tag="PA1531" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250222.1" /db_xref="GeneID:883076" /translation="MLAQFTPSALADLANCVLRIPLALQQPSSVAMTLPSLTSFMPHF GAPALLLLQLLAALPATAAETDATPLRFSVMESWSMPLVRLQRGQPIDGIVYDITRSL ARQVGRKALYHPYPRGRIEQAMNAGEIDVRCYISPAWLSHDFPGYRWSVALLVQRDIL VAREGFAPIPEALPAQRIGTVLGYSYPRLQALFDIGRLRRDDARTQDLVLEKLRAGRY RYAVSHQLSLHWSNRQAPGQPPLQEAAQLEETAVSCMVRDSAEVPVEAILKTFEEMKR SGEIEEILQRYR" misc_feature complement(1669092..1669745) /locus_tag="PA1531" /note="ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:440596" gene 1669989..1672034 /gene="dnaX" /locus_tag="PA1532" /db_xref="GeneID:883094" CDS 1669989..1672034 /gene="dnaX" /locus_tag="PA1532" /EC_number="2.7.7.7" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunits gamma/tau" /protein_id="NP_250223.1" /db_xref="GeneID:883094" /translation="MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFT GTRGVGKTTIARILAKCLNCETGVSSTPCGECSVCREIDEGRFVDLIEVDAASRTKVE DTRELLDNVQYSPTRGRYKVYLIDEVHMLSSHSFNALLKTLEEPPPHVKFLLATTDPQ KLPVTILSRCLQFSLKNMPPERVVEHLTHVLGAENVPFEDDALWLLGRAADGSMRDAM SLTDQAIAFGEGKVLAADVRAMLGTLDHGQVYGVLQALLEGDARALLEAVRHLAEQGP DWGGVLAEILNVLHRVAIAQALPEAIDNGQGDRERVLALAQALPAEDVQFYYQMGLIG RRDLPLAPDPRSGFEMVLLRMLAFRPADADGVPRTPLKDLGISKATTDPANSPVAGAA SPAPVATVAPAPVVAAPVEAPAAPPAAPSAPPAAVEARVTEAVVEEPAAAAEVVDLPW EEPAPSLAAEPEPEPEPEPLAVEAPSVPPAVAVEAVVETVLEALPAALPVAPDEQDEQ DDEPPPADDYYEVDMDTLAYLDATPEPDVVVVEEPLPAAKPATGLAAEWLELFPRLGL GGLTASIGANCTLVAADDDHWHLHLDPGQSALFNATQQRRLNDALNQHLGRTLKLEVT LQKPEQETPAQAAARRRAERQRAAEASIDADPLVRQLREQFAAVVRDGTIEPLEAKA" misc_feature 1669989..1672019 /gene="dnaX" /locus_tag="PA1532" /note="DNA polymerase III subunits gamma and tau; Validated; Region: PRK07994" /db_xref="CDD:236138" gene 1672080..1672406 /locus_tag="PA1533" /db_xref="GeneID:882998" CDS 1672080..1672406 /locus_tag="PA1533" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="nucleoid-associated protein" /protein_id="NP_250224.1" /db_xref="GeneID:882998" /translation="MMKGGMAGLMKQAQQMQEKMQKMQEELANAEVTGQSGAGLVSVV MTGRHDVKRVSLDDSLMQEDKEILEDLIAAAVNDAVRKIEQNNQEKMSGFTSGMQLPP GFKMPF" misc_feature 1672092..1672382 /locus_tag="PA1533" /note="DNA-binding nucleoid-associated protein YbaB/EfbC [Transcription]; Region: YbaB; COG0718" /db_xref="CDD:440482" gene 1672485..1673081 /gene="recR" /locus_tag="PA1534" /db_xref="GeneID:879372" CDS 1672485..1673081 /gene="recR" /locus_tag="PA1534" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="recombination protein RecR" /protein_id="NP_250225.1" /db_xref="GeneID:879372" /translation="MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLA QALTAAMEGVGHCRQCRTLSEEELCPQCADPRRDDSLLCVVEGPLDVFAVEQTGYRGR YFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS" misc_feature 1672488..1673069 /gene="recR" /locus_tag="PA1534" /note="Recombinational DNA repair protein RecR [Replication, recombination and repair]; Region: RecR; COG0353" /db_xref="CDD:440122" gene 1673204..1674352 /locus_tag="PA1535" /db_xref="GeneID:879302" CDS 1673204..1674352 /locus_tag="PA1535" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_250226.1" /db_xref="GeneID:879302" /translation="MTDFQQYFDESHQLIRDSVRRFVEREVLPYIDEWEEAEEFPREL YLKAGAAGILGIGYPEAYGGSCEGDLFAKVAASEELMRCGSGGLVAGLGSLDIGLPPV VKWARPEVRERVVPAVLRGEKIMALAVTEPSGGSDVANLKTRAVRDGDHYRVSGSKTF ITSGVRADYYTVAVRTGGEGFAGISLLLVEKGTAGFSVGRKLKKMGWWASDTAELFFD DCRVPAENLIGVENAGFACIMANFQSERLALAVMANMTAQLALEESLRWAREREAFGK PIGKFQVLRHRLAEMATQLEVSREFTYRQAAKMAAGKSVIKEISMAKNFATDVADRLT YDAVQVLGGMGYMRESLVERLYRDNRILSIGGGSREIMNEIIGKQMGL" misc_feature 1673231..1674346 /locus_tag="PA1535" /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933" /db_xref="CDD:447864" misc_feature order(1673492..1673494,1673582..1673584,1673588..1673590, 1673681..1673683,1673687..1673689,1674290..1674298, 1674302..1674304,1674308..1674310) /locus_tag="PA1535" /note="active site" /db_xref="CDD:173838" gene complement(1674365..1674904) /locus_tag="PA1536" /db_xref="GeneID:883002" CDS complement(1674365..1674904) /locus_tag="PA1536" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250227.1" /db_xref="GeneID:883002" /translation="MNPPLPHFRYHPEPLASGSIEASATTCQCCGKARGYVYTGSPYS RHELPPGSLCPWCIADGSAAARYEASFSDDYPLLDAGVAADIVTEVCERTPGYTSWQQ ERWLVCCEDACAFRGDAGREEIGQLGAEGLAQRFADFAWPAITWQRLVDAYTPGGNPA IYRFDCLHCGQAHYDLDFT" misc_feature complement(1674368..1674904) /locus_tag="PA1536" /note="Colicin E2 tolerance protein CbrC, UPF0167 family [General function prediction only]; Region: CbrC; COG3196" /db_xref="CDD:442429" gene complement(1674978..1675865) /locus_tag="PA1537" /db_xref="GeneID:879400" CDS complement(1674978..1675865) /locus_tag="PA1537" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="Baeyer-Villiger monooxygenase" /protein_id="NP_250228.1" /db_xref="GeneID:879400" /translation="MKSFENKVAAITGAGSGIGRALAVELGRQGCHLALADVNAAALE ETRQLLASSGVRVSTAVVDVADREQVQAWADKAASEHGRVNLIFNNAGVAHAGTVEGS DYSEYEWIMNINFWGVVNGTKAFLPHLKASGNGHVVNVSSVFGLFAQPGMSAYNATKY AVRGFTESLRQELDMEDSGVSASCVHPGGIKTNIAKTARMNESMAKVTGQAPDKAREQ FNDQLLRTTPEKAAQVILRGVQRDSRRILIGTDAHAIDVMLRLAPVLYQRLVTASMRL AARFAPRPKSPQGAREASE" misc_feature complement(1675044..1675859) /locus_tag="PA1537" /note="Short-chain dehydrogenase [General function prediction only]; Region: YqjQ; COG0300" /db_xref="CDD:440069" gene complement(1675862..1677445) /locus_tag="PA1538" /db_xref="GeneID:880860" CDS complement(1675862..1677445) /locus_tag="PA1538" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="flavin-containing monooxygenase" /protein_id="NP_250229.1" /db_xref="GeneID:880860" /translation="MYTPANNHNRSLAMSTQPTPAAARHCKVAIIGTGFSGLGMAIRL RQEGEDDFLIFEKDAGVGGTWRVNNYPGCACDVQSHVYSFSFEANPEWTRMFARQPEI RAYLEKCWEKYRLQEKTLLNTEIGKLAWDERQSLWHLHDAQGNHYTANAVVSGMGGLS TPAYPRLDGLENFQGKVFHSQQWDHDYDLKGKRVAVIGTGASAIQFVPEIQPLVAALD LYQRTPPWILPKPDRAISETERRRFRRFPLVQKLWRGGLYSLLEGRVLGFTFAPQVMK LVQRLAIRHIHKQIKDPELRRKVTPDYTIGCKRILMSHNYYPALAAANSTVITEGIRA VTANGIVDGNGREREVDAIIFGTGFTANDPIPRGVVFGRDGRDLLDSWSKGPEAYKGT TTAGFPNLFFLMGPNTGLGHNSMVYMIESQIAYVLDALKLMKRRELLSLEVKAPVQER YNEYLQRKLDRSVWSVGGCKSWYLHPVSGRNCTLWPGFTWRFRALTRQFDASAYHLTT TPLAALSNEARQQAEGVPA" misc_feature complement(1676057..1677388) /locus_tag="PA1538" /note="Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism]; Region: CzcO; COG2072" /db_xref="CDD:441675" gene 1677559..1678407 /locus_tag="PA1539" /db_xref="GeneID:883041" CDS 1677559..1678407 /locus_tag="PA1539" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250230.1" /db_xref="GeneID:883041" /translation="MSDMNETKDRVADAPGKRALLEAALRLGSSSRSLGAIGLRELAR EAGLNPNTFYRHFRDIDDLGLTMIRDISTQLRQPLRQLRREAATRAAPGARAQTTPFG LDLERGRRVCRETVRLFFDFVESNPAAFIVGVRELHGASPVLRGALRQIMDEFAEDMS EDIIEFRLLPAVSEATIRRLSSLIGRQLFQLSLDYIGQPERRREICALGEEQILLLFT GAAVLQMMGVSLDAEASGQLEQAHAGQQQQQAEPAAPGQALAEQRPAHGDGGEDAEAA PDRIGE" misc_feature 1677607..>1678053 /locus_tag="PA1539" /note="HTH-type transcriptional repressor FabR; Region: PRK11202" /db_xref="CDD:236881" gene complement(1678261..1678590) /locus_tag="PA1540" /db_xref="GeneID:883069" CDS complement(1678261..1678590) /locus_tag="PA1540" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="multidrug efflux system protein MdtI" /protein_id="NP_250231.1" /db_xref="GeneID:883069" /translation="MLTLNWIPFAWLGLAIALEVVANLLLKYSDGFRRRGLGIASILC VMAAFTALAQAVKDIELSLAYAIWGGFGILATVAMGWALFGQRLAWRGWLGLLLLLAG MSLLKLA" misc_feature complement(1678318..1678590) /locus_tag="PA1540" /note="multidrug/spermidine efflux SMR transporter subunit MdtI; Region: PRK10650" /db_xref="CDD:182618" gene complement(1678584..1678952) /locus_tag="PA1541" /db_xref="GeneID:883058" CDS complement(1678584..1678952) /locus_tag="PA1541" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="drug efflux transporter" /protein_id="NP_250232.1" /db_xref="GeneID:883058" /translation="MRSWIYLLLAIGAEVIGTTSMKLAATHAPVAGMLLMYGMIGLSY FFLALAVKRVPVGVAYALWEGIGIVLITAVSVAWLGESIGLYKAVGLGVMIAGILLIK SGTRNASGTPAQSRGEAVTC" misc_feature complement(1678629..1678952) /locus_tag="PA1541" /note="EamA-like transporter family; Region: EamA; cl23754" /db_xref="CDD:474045" gene complement(1679361..1680197) /locus_tag="PA1542" /db_xref="GeneID:883060" CDS complement(1679361..1680197) /locus_tag="PA1542" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250233.1" /db_xref="GeneID:883060" /translation="MTATGTASPVRANFPVRRMDFSFSETPKYWWDGQPFMTQFMNNL SSLFPYGEKFFVDSVRAVRDRLEDPQLKKDVSAFIGQEAMHSKEHAAYNEYAEEHGVD LECLELRIKVLLENVSKVTTRKHQLAITCALEHFTATMAAQLLKREDLTIQMQSPKMY KLWMWHAIEENEHKNVAYDVYQKVYGGYFTRVLVMMLTTLMFFGVIGWFQLDLLRKDG QLFNWRSWKHGLGTLFGLRKGFFTRLLLPYLDYYRPGFHPSDHDTAKLEKYWKDKLAF AD" misc_feature complement(1679373..1680197) /locus_tag="PA1542" /note="Predicted metal-dependent hydrolase [General function prediction only]; Region: COG3687" /db_xref="CDD:442903" gene complement(1680437..1680985) /gene="apt" /locus_tag="PA1543" /db_xref="GeneID:879394" CDS complement(1680437..1680985) /gene="apt" /locus_tag="PA1543" /EC_number="2.4.2.7" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="adenine phosphoribosyltransferase" /protein_id="NP_250234.1" /db_xref="GeneID:879394" /translation="MIFDEFTLKSQIRAVPDFPKPGVVFRDITPLFQSPRALRMTVDS FVQRYIEADFSHIGAMDARGFLIGSAVAYALNKPLVLFRKQGKLPADVLAEGYQTEYG EAFLEVHADSLCEGDSVLIFDDLIATGGTLLAAASLVRRLGARVFEAAAIIDLPELGG STRLQDAGISTFSLTAFALDER" misc_feature complement(1680455..1680964) /gene="apt" /locus_tag="PA1543" /note="adenine phosphoribosyltransferase; Provisional; Region: PRK02304" /db_xref="CDD:235028" misc_feature complement(order(1680521..1680523,1680593..1680607, 1680611..1680619,1680797..1680799,1680803..1680805)) /gene="apt" /locus_tag="PA1543" /note="active site" /db_xref="CDD:206754" gene complement(1681071..1681805) /gene="anr" /locus_tag="PA1544" /db_xref="GeneID:883009" CDS complement(1681071..1681805) /gene="anr" /locus_tag="PA1544" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator Anr" /protein_id="NP_250235.1" /db_xref="GeneID:883009" /translation="MAETIKVRALPQAHCKDCSLAPLCLPLSLTVEDMDSLDEIVKRG RPLKKGEFLFRQGDPFGSVFAVRSGALKTFSITDAGEEQITGFHLPSELVGLSGMDTE TYPVSAQALETTSVCEIPFERLDELSEQLPQLRRQLMRLMSREIRDDQQMMLLLSKKT ADERIATFLVNLSARFRARGFSAQQFRLAMSRNEIGNYLGLAVETVSRVFTRFQQNGL ISAEGKEVHILDSIELCALAGGQLEG" misc_feature complement(1681089..1681766) /gene="anr" /locus_tag="PA1544" /note="fumarate/nitrate reduction transcriptional regulator Fnr; Region: PRK11161" /db_xref="CDD:183004" gene 1682051..1682518 /locus_tag="PA1545" /db_xref="GeneID:883044" CDS 1682051..1682518 /locus_tag="PA1545" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250236.1" /db_xref="GeneID:883044" /translation="MLTLSGWITTQVPPSSRAAADAKAARTGTAEQAEDPAAGTDAAD QHVQLSQAGRELAATMGVPVEEEDEDIPQELRPMVKMIRELKKKIEEKLRELQEAMRS SDPGAKEARVPELQKELQQLNSALQTATAAMASAIKEMGISDPALIMKVMGSR" misc_feature <1682300..1682458 /locus_tag="PA1545" /note="ATPase-like domain of the ASKHA (Acetate and Sugar Kinases/Hsc70/Actin) superfamily; Region: ASKHA_ATPase-like; cl49607" /db_xref="CDD:483947" gene complement(1682567..1683949) /gene="hemN" /locus_tag="PA1546" /db_xref="GeneID:883053" CDS complement(1682567..1683949) /gene="hemN" /locus_tag="PA1546" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="oxygen-independent coproporphyrinogen-III oxidase" /protein_id="NP_250237.1" /db_xref="GeneID:883053" /translation="MLDTIRWDADLIRRYDLSGPRYTSYPTAVQFHEGIGPFDQLHAL RDSRKAGHPLSLYVHIPFCANICYYCACNKVITKDRGRSAPYLARLVREIEIVSRHLS REQVVEQLHFGGGTPTFLSPGQLRELMSQLRTHLNLLDDDSGDYGIEIDPREADWSTM GLLRELGFNRVSLGVQDFDMEVQKAVNRMQTPEETRTIVEAARTLQYRSINLDLIYGL PKQTPDSFARTVDEVIALQPDRLSVFNYAHLPERFMPQRRINADDLPSPGQKLEMLQR TTEQLAAAGYRYIGMDHFALPDDELASAQEDGTLQRNFQGYTTHGHCDLVGLGVSAIS QIGDLYSQNSSDINDYQTSLDNGQLAIRRGLHCNSDDRVRRAVIQQLICHFELAFEDI ETEFGIDFRSYFAELWPDLERFAADGLIRLDAKGIDITSSGRLLVRSICMLFDRYLPS LNRQRFSRVI" misc_feature complement(1682570..1683940) /gene="hemN" /locus_tag="PA1546" /note="coproporphyrinogen III oxidase; Provisional; Region: PRK13347" /db_xref="CDD:237356" gene complement(1684077..1684760) /locus_tag="PA1547" /db_xref="GeneID:883020" CDS complement(1684077..1684760) /locus_tag="PA1547" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250238.1" /db_xref="GeneID:883020" /translation="MAELAPLLVSALILGLLGGGHCLGMCGGLMGALTLAIPAEQRGR RLRLLLAYNLGRILSYACAGLLLGLAGWAVARTPLAGALRVVAGLLLIAMGLYLAGWW SGLTRVEALGRGLWRHLEPFARRLLPVSSLPRALLLGAIWGWLPCGLVYSTLLWATSQ GSALDSALLMLAFGLGTWPVLLATGMAAERVTALLRRRGVRIVGGLMVILFGLWTLPG PHQAWLMGH" misc_feature complement(1684113..1684688) /locus_tag="PA1547" /note="Uncharacterized membrane protein, DsbD domain [Function unknown]; Region: DsbD; COG2836" /db_xref="CDD:442084" gene complement(1684753..1684962) /locus_tag="PA1548" /db_xref="GeneID:883072" CDS complement(1684753..1684962) /locus_tag="PA1548" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250239.1" /db_xref="GeneID:883072" /translation="MAALYILIPVAIVIVAIAIYVFFWAVDSGQYDDLDGPAHSILFD DEDPKHQAGVDEAEKPSKPEDRPRG" misc_feature complement(1684783..1684962) /locus_tag="PA1548" /note="Cytochrome oxidase maturation protein, CcoS/FixS family [Posttranslational modification, protein turnover, chaperones]; Region: FixS; COG3197" /db_xref="CDD:442430" gene complement(1684941..1687376) /locus_tag="PA1549" /db_xref="GeneID:883015" CDS complement(1684941..1687376) /locus_tag="PA1549" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cation-transporting P-type ATPase" /protein_id="NP_250240.1" /db_xref="GeneID:883015" /translation="MSAPLPCYHCGLPVPAGSRFEARVLGETRAMCCPGCQAVAEAIV AGGLESYYRHRSENAANPEALPKALSEELQLYDRPDVQGGFVRHEGELAETSLMIEGI SCAACGWLIEKHLRQLPGVAEARLNLSNHRLHVRWQDSQLPLSQLLGELRQIGYAGHP YQPDRATERLAMENRRALRQLGVAGLLWIQVMMAVMATWPEFNLDLSAGMDRILRWVS LILTTPIVFYCCGQFFRGALRDLRTRHLTMDVSVSLAIGGAYVAGIWSTITGQGELYF DAVGMFALFLLAGRYLERRARERTAASTAQLVNLLPASCLRLDAANQGERILLSELRV GDRVLVPPGAVLPADGVILDGQSSVDESLLTGEYLPHPRQAGDTVTGGTLNVEGPLTV EVGALGDDSRLSAIVRLLERAQADKPRLAELADKVAQWFLLIVLLVAAAVGALWWQVD HQRAFWVVLSLLVATCPCALSLATPTALTAATGSLHKLGLLITRGHVLEGLNHIDTVI FDKTGTLTEGRLTLKQVLPLRDLDADRCLALAAALENRSEHPIARAFGRAPEAADSVA SHPGLGLEGLVEGRRLRIGQAAFVSNLGGSATPAMPGDSGQWLLLGDEQGPLAWFGLD DRLRSDAPALLAACKARGWRTLLLSGDASPMVASVAAELGIDEARGGLTPDDKLAMLE RLHGEGRRVLMLGDGVNDVPVLAGADISVAMGSATDLAKTSADAVLLSNRLDSLVQTF RLARRTRHIIIENLAWASLYNGLVLPFAALGWITPGWAAIGMSVSSLLVVVNALRLTR TPSPRSVWPRSTS" misc_feature complement(1687107..1687361) /locus_tag="PA1549" /note="Putative metal-binding domain of cation transport ATPase; Region: ATPase-cat_bd; pfam12156" /db_xref="CDD:463475" misc_feature complement(1684983..1687100) /locus_tag="PA1549" /note="Cation-transporting P-type ATPase [Inorganic ion transport and metabolism]; Region: ZntA; COG2217" /db_xref="CDD:441819" gene complement(1687373..1687912) /locus_tag="PA1550" /db_xref="GeneID:883057" CDS complement(1687373..1687912) /locus_tag="PA1550" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250241.1" /db_xref="GeneID:883057" /translation="MQSETHPQPWYKHFWAWFIVALLATSVVLGLSLVTIAVRNQDTL VTDNYYEAGKGINRSLERENLAVRLQVHAKVKVDDLTGEVEVRLTGNSRPDRLTLNLI SPTQPEKDRRVELLRSNSDRERYVGQLTDAVEGRRFVELLGQEGSGQWRLFEEEVVSP TVVMELGDEPLQGAEAKRP" misc_feature complement(1687403..1687909) /locus_tag="PA1550" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3198" /db_xref="CDD:442431" gene complement(1687924..1689339) /locus_tag="PA1551" /db_xref="GeneID:883008" CDS complement(1687924..1689339) /locus_tag="PA1551" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ferredoxin" /protein_id="NP_250242.1" /db_xref="GeneID:883008" /translation="MSKQIPVQDVTPPAKGDTNNNDLYAKREKIYTRAFTGIFRRLRM VGGAALFLLYFGTVWLNWSGRQAVWWDLPERKFYIFGATFWPQDFMLLSWLLIVCAFG LFFITVFAGRVWCGYTCPQSVWTWIYMWCEKVTEGDRNQRIKLDKAPMSGNKLLRKTA KHSLWLLIGLVTGLTFVGYFSPIRELIPELLTGQADGWAYFWVGFFTLATYGNAGWLR EQVCIYMCPYARFQSVMFDKDTLIVSYDPRRGEKRGPRKKSLDYKAQGLGDCIDCTMC VQVCPTGIDIRDGLQIECIGCAACIDACDSIMEKMNYPKGLISYTTEHNLNGQKTHLA RPRLIGYAIALVLMISALITAVVLRPLVGFDVSKDRVLYRENELGRIENVYSLKIMNK DQQDHTYILGAKGLEGLTLEGRRELKVAAGDILNLPMELSIEPEKLPSTTNEIVFTIE SADDPSIHKEAKSRFIGPRTR" misc_feature complement(1687939..1689225) /locus_tag="PA1551" /note="cytochrome c oxidase accessory protein FixG; Region: ccoG_rdxA_fixG; TIGR02745" /db_xref="CDD:274278" gene complement(1689557..1690513) /gene="ccoP1" /locus_tag="PA1552" /db_xref="GeneID:883043" CDS complement(1689557..1690513) /gene="ccoP1" /locus_tag="PA1552" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="cytochrome C oxidase cbb3-type subunit CcoP" /protein_id="NP_250243.1" /db_xref="GeneID:883043" /translation="MTTFWSLYITALTLGTLLALTWLIFATRKGQRSSTTDETVGHSY DGIEEYDNPLPKWWFMLFVGTLVFAVGYLALYPGLGTWKGLMPGYQSADEFADKEKGW TGVHQWEKEMAKADEKYGPIFAKFAAMPIEEVAKDPQAVKMGGRLFASNCSICHGSDA KGAYGFPNLTDADWRWGGEPETIKTTIMAGRHAAMPAWGEVIGEEGVKNVAAFVLTQM DGRKLPEGAKADIEAGKQVFATTCVACHGPEGKGTPAMGAPDLTHPGAFIYGSSFAQL QQTIRYGRQGVMPAQQEHLGNDKVHLLAAYVYSLSHGEKSAE" misc_feature complement(1689572..1690429) /gene="ccoP1" /locus_tag="PA1552" /note="Di-haem oxidoreductase, putative peroxidase; Region: DHOR; cl21467" /db_xref="CDD:473872" gene complement(1690510..1690695) /gene="ccoQ1" /locus_tag="PA1552.1" /db_xref="GeneID:9793392" CDS complement(1690510..1690695) /gene="ccoQ1" /locus_tag="PA1552.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="cytochrome C oxidase cbb3-type subunit CcoQ" /protein_id="YP_003933610.1" /db_xref="GeneID:9793392" /translation="MDIGTLRGLGTVVIMVAFIGLVIWAYSGKRKKSFDEATMLPFAD DPEAKKHVEQASRSNKE" misc_feature complement(1690558..1690695) /gene="ccoQ1" /locus_tag="PA1552.1" /note="Cbb3-type cytochrome oxidase, subunit 3 [Energy production and conversion]; Region: CcoQ; COG4736" /db_xref="CDD:443770" gene complement(1690701..1691312) /gene="ccoO1" /locus_tag="PA1553" /db_xref="GeneID:883010" CDS complement(1690701..1691312) /gene="ccoO1" /locus_tag="PA1553" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="cbb3-type cytochrome C oxidase subunit II" /protein_id="NP_250244.1" /db_xref="GeneID:883010" /translation="MKNHEILEKNVGLLAIFMVIAVSIGGLTQIVPLFFQDVTNTPVE GMKPRTALELEGRDIYIREGCVGCHSQMVRPFRAETERYGHYSVAGESVWDHPFLWGS KRTGPDLARVGGRYSDDWHRAHLYNPRNVVPESKMPAYPWLVENKLDGKDTATKMEVL RKLGVPYTDEDIAGAREAVKGKTEMDALVAFLQGLGTSIKSKR" misc_feature complement(1690704..1691309) /gene="ccoO1" /locus_tag="PA1553" /note="Cbb3-type cytochrome oxidase, cytochrome c subunit FixO [Energy production and conversion]; Region: CcoO; COG2993" /db_xref="CDD:442232" gene complement(1691327..1692754) /gene="ccoN1" /locus_tag="PA1554" /db_xref="GeneID:883001" CDS complement(1691327..1692754) /gene="ccoN1" /locus_tag="PA1554" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="cbb3-type cytochrome C oxidase subunit I" /protein_id="NP_250245.1" /db_xref="GeneID:883001" /translation="MSTAISQTAYNYKVVRQFAVMTVVWGVIGMGLGVLIAAQLVWPE LNFDLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYVVQRTSQARLISDTLAAFTFWG WQAVIVGAVLTLPQGFTTSKEYAELEWPLAILLAIVWITYAIVFFGTIVKRKVKHIYV GNWFYGAFILVTAMLHIVNHMSLPVSWFKSYSAYSGATDAMVQWWYGHNAVGFFLTTG FLGMMYYFVPKQAERPVYSYRLSIVHFWALISLYIWAGPHHLHYTALPDWAQSLGMVM SLILLAPSWGGMINGMMTLSGAWHKLRTDPILRFLVVSLAFYGMSTFEGPMMAIKTVN ALSHYTDWTIGHVHAGALGWVAMISIGSLYHLIPKVFGRPQMHSIGLINAHFWLATIG TVLYIASMWVNGITQGLMWRAVNEDGTLTYSFVEALVASHPGFIVRMIGGGFFLTGML LMAYNTWRTVRAAKPAEYEAAAQIA" misc_feature complement(1691330..1692748) /gene="ccoN1" /locus_tag="PA1554" /note="cbb3-type cytochrome c oxidase subunit I; Provisional; Region: PRK14488" /db_xref="CDD:237726" misc_feature complement(order(1691435..1691437,1691519..1691524, 1691699..1691704,1691711..1691713,1691732..1691734, 1692524..1692526,1692677..1692679,1692689..1692694, 1692704..1692706,1692725..1692727)) /gene="ccoN1" /locus_tag="PA1554" /note="Low-spin heme binding site [chemical binding]; other site" /db_xref="CDD:238461" misc_feature complement(order(1692395..1692397,1692407..1692409, 1692425..1692430,1692605..1692607,1692614..1692616, 1692638..1692640,1692647..1692649)) /gene="ccoN1" /locus_tag="PA1554" /note="D-pathway [active]" /db_xref="CDD:238461" misc_feature complement(order(1691522..1691524,1691738..1691743, 1691753..1691755,1692152..1692157,1692170..1692172)) /gene="ccoN1" /locus_tag="PA1554" /note="Putative water exit pathway; other site" /db_xref="CDD:238461" misc_feature complement(order(1691717..1691719,1691978..1691983, 1692131..1692133)) /gene="ccoN1" /locus_tag="PA1554" /note="Binuclear center (active site) [active]" /db_xref="CDD:238461" misc_feature complement(order(1691894..1691896,1691903..1691905, 1691978..1691983,1692086..1692088,1692119..1692121, 1692131..1692133)) /gene="ccoN1" /locus_tag="PA1554" /note="K-pathway [active]" /db_xref="CDD:238461" misc_feature complement(order(1691519..1691524,1691738..1691743, 1691978..1691980)) /gene="ccoN1" /locus_tag="PA1554" /note="Putative proton exit pathway; other site" /db_xref="CDD:238461" gene complement(1693119..1694045) /gene="ccoP2" /locus_tag="PA1555" /db_xref="GeneID:883066" CDS complement(1693119..1694045) /gene="ccoP2" /locus_tag="PA1555" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="cytochrome C oxidase cbb3-type subunit CcoP" /protein_id="NP_250246.1" /db_xref="GeneID:883066" /translation="MTTFWSLYITALTVGTLIALLWLVFATRKGEAKGTTEKTMGHSY DGIEEYDNPLPKWWFMLYIGTIVFSVGYLVLYPGLGNWKGVLPGYEGGWTQDKQWERE MNIAQEKYGPIFAKYAAMPIEEVAKDEHAMKMGSRMFATYCSICHGSDAKGALGFPNL ADNEWRWGGDPQSIETTILGGRHAIMAAWGDILGEDGVKNVAAYVRTELAGLKLPEGT KADVEAGKQIFSVNCVACHGPEGKGTALVGAPNLTNPGAFIYGSSYAQLQQTIRHGRQ GQMPAQEPYLGKEKVHILAAYIYNLSHNQGSN" misc_feature complement(1693131..1693961) /gene="ccoP2" /locus_tag="PA1555" /note="Di-haem oxidoreductase, putative peroxidase; Region: DHOR; cl21467" /db_xref="CDD:473872" gene complement(1694042..1694227) /gene="ccoQ2" /locus_tag="PA1555.1" /db_xref="GeneID:9793391" CDS complement(1694042..1694227) /gene="ccoQ2" /locus_tag="PA1555.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="cytochrome C oxidase cbb3-type subunit CcoQ" /protein_id="YP_003933611.1" /db_xref="GeneID:9793391" /translation="MDIGTLRGLGTLLIMVAFIGLVIWAYSGKRKKSFDEATMLPFAD DPEAKKHVEQASRSNKE" misc_feature complement(1694090..1694227) /gene="ccoQ2" /locus_tag="PA1555.1" /note="Cbb3-type cytochrome oxidase, subunit 3 [Energy production and conversion]; Region: CcoQ; COG4736" /db_xref="CDD:443770" gene complement(1694233..1694841) /gene="ccoO2" /locus_tag="PA1556" /db_xref="GeneID:883049" CDS complement(1694233..1694841) /gene="ccoO2" /locus_tag="PA1556" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="cbb3-type cytochrome C oxidase subunit II" /protein_id="NP_250247.1" /db_xref="GeneID:883049" /translation="MKHEILEKNVGLLALCMAVAVSIGGLTQIVPLFFQDVTNTPVEG MKPYTALQLEGRDIYIREGCVGCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWGSK RTGPDLARVGSRYSDDWHRAHLFNPRNVVPESKMPAYPWLVENKLDGKDIEKKLEVMR TLGVPYTDEDIKGAKDSLKGKTEMDAVVAYLQVLGTSIKNKR" misc_feature complement(1694236..1694841) /gene="ccoO2" /locus_tag="PA1556" /note="Cbb3-type cytochrome oxidase, cytochrome c subunit FixO [Energy production and conversion]; Region: CcoO; COG2993" /db_xref="CDD:442232" gene complement(1694852..1696279) /gene="ccoN2" /locus_tag="PA1557" /db_xref="GeneID:879347" CDS complement(1694852..1696279) /gene="ccoN2" /locus_tag="PA1557" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="cbb3-type cytochrome C oxidase subunit I" /protein_id="NP_250248.1" /db_xref="GeneID:879347" /translation="MSTTNPESAYNYKVVRQFAIMTVVWGIVGMTVGVLIAAQLVWPD LNFGLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYAVQRTCQVRLFSDTLASFTFWG WQLVILLAAISLPLGYTSSKEYAELEWPIDILITVVWVAYAVVFFGTLVKRKVKHIYV GNWFFGGFILTVAMLHVVNNLELPVTFTKSYSLYAGATDAMVQWWYGHNAVGFFLTAG FLGMMYYFVPKQAERPVYSYRLSIVHFWALIAVYIWAGPHHLHYTALPDWAQSLGMVM SLILLAPSWGGMINGMMTLSGAWHKLRSDPILRFLVVSLAFYGMSTFEGPMMAIKTVN ALSHYTDWTIGHVHAGALGWVAMVSIGSLYHLIPKVFGREKMYSLGLINAHFWLATIG TVLYIASMWVNGITQGLMWRAVNEDGTLTYSFVEALAAGHPGFIVRMLGGFIFLLGMF LMAYNTWRTVSAAKPAEYEAAAQIA" misc_feature complement(1694855..1696273) /gene="ccoN2" /locus_tag="PA1557" /note="cbb3-type cytochrome c oxidase subunit I; Provisional; Region: PRK14488" /db_xref="CDD:237726" misc_feature complement(order(1694981..1694983,1695092..1695094, 1695224..1695226,1695236..1695238,1696229..1696231)) /gene="ccoN2" /locus_tag="PA1557" /note="Low-spin heme binding site [chemical binding]; other site" /db_xref="CDD:238831" misc_feature complement(order(1695047..1695049,1695263..1695268, 1695278..1695280,1695677..1695682,1695695..1695697)) /gene="ccoN2" /locus_tag="PA1557" /note="Putative water exit pathway; other site" /db_xref="CDD:238831" misc_feature complement(order(1695242..1695244,1695503..1695508, 1695656..1695658)) /gene="ccoN2" /locus_tag="PA1557" /note="Binuclear center (active site) [active]" /db_xref="CDD:238831" misc_feature complement(order(1695044..1695049,1695263..1695268, 1695503..1695505)) /gene="ccoN2" /locus_tag="PA1557" /note="Putative proton exit pathway; other site" /db_xref="CDD:238831" gene 1696467..1697099 /locus_tag="PA1558" /db_xref="GeneID:879463" CDS 1696467..1697099 /locus_tag="PA1558" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250249.1" /db_xref="GeneID:879463" /translation="MSLKWNRPAGSLSATLILAHGAGAPMDSPFMERIAELLAAQGIA VARFEFPYMAQRREDGRKRPPNPQAQLLDCWRRVHAQVRETLDGPLALGGKSMGGRMA SLLADELGADALVCLGYPFYAAGKPEKPRVAHLAGLRTPTLIVQGERDALGNREAVAG YALAPTIRLHWLAAADHDLKPLKASGLTHEQHLAATAREVAGFLRGLQGH" misc_feature 1696506..1697075 /locus_tag="PA1558" /note="Alpha/beta hydrolase domain; Region: Abhydrolase_11; pfam20408" /db_xref="CDD:466557" gene 1697188..1698344 /locus_tag="PA1559" /pseudogene="unknown" /db_xref="GeneID:883111" gene complement(1698382..1699947) /gene="aer" /locus_tag="PA1561" /db_xref="GeneID:879271" CDS complement(1698382..1699947) /gene="aer" /locus_tag="PA1561" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aerotaxis receptor Aer" /protein_id="NP_250252.1" /db_xref="GeneID:879271" /translation="MRNNQPITQHERVYPAEQRLITTTNLKGIITYCNEAFIDISGFS REELMSAPHNLIRHPDVPPAVFAHMWTTLKAGRPWMGIVKNRCKNGDHYWVSAYVTPI YDQGAVVGYESVRVKPTAEQIQRAEALYRRLGAGKPAIPRRDRWLPVLLDWLPFILIS QIGFLIGIWLNSWWGFILAGLLAVPLGLAGLRWQKRGLKRLMRLAEQTTSDPLIAQMY TDSRGDQARLEMAILSQDARLKTCLTRLQDTAEYLTEQARQADTLAHHSSAGLEQQRA ETEQVATAVNEMAATTQEVANNVQLTADATQKANELTSRGRDIAAETRNAIQRLSESV GETGAAVSRLAQDSNEIGGVVDVIKGIADQTNLLALNAAIEAARAGDQGRGFAVVADE VRSLAQRTAASTEQIHHLIAKLQNTANDAVHTMESGLQQAEAGVQRVLEADSALVGIS EAVSNITEMTTQIAAAAEEQSAVAEEINRNISTIAALAEQTSDEALRTAKLSEELTTT AQSQYSLVERFNR" misc_feature complement(<1699549..1699887) /gene="aer" /locus_tag="PA1561" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature complement(1698388..>1699467) /gene="aer" /locus_tag="PA1561" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" protein_bind complement(1699017..1699029) /gene="aer" /locus_tag="PA1561" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1561" /bound_moiety="AmrZ" gene complement(1700320..1703052) /gene="acnA" /locus_tag="PA1562" /db_xref="GeneID:879412" CDS complement(1700320..1703052) /gene="acnA" /locus_tag="PA1562" /EC_number="4.2.1.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aconitate hydratase" /protein_id="NP_250253.1" /db_xref="GeneID:879412" /translation="MPALDSLKTLRSLAVDGKTYHYYSLPEAARTLGDLGKLPMSLKV LLENLLRWEDGSTVTGDDLKALAGWLRERRSDREIQYRPARVLMQDFTGVPAVVDLAA MRAAMAKAGGDPQKINPLSPVDLVIDHSVMVDKFASESAFEQNVEIEMQRNGERYAFL RWGQNAFDNFSVVPPGTGICHQVNLEYLGRTVWTKDEDGRTYAFPDTLVGTDSHTTMI NGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTQMLR KKGVVGKFVEFYGDGLADLPLADRATIANMAPEYGATCGFFPVDEITLGYLRLSGRPE STVKLVEAYSKEQGLWREKGHEPVFTDTLHLDMGEVEASLAGPKRPQDRVALQNVASA FNEFLGLQLHPSSTEEGRLLSEGGGGTAVGANAAFGEIDYQHDGQTHRLKNGAVVIAA ITSCTNTSNPSVMMAAGLLAKKAVEKGLQRKPWVKSSLAPGSKVVTDYFKAAGLTRYL DELGFDLVGYGCTTCIGNSGPLLEPIEKAIQQADLTVASVLSGNRNFEGRVHPLVKTN WLASPPLVVAYALAGSVRINLSEEPLGTGKDGQPVYLKDIWPSQKEIAEAIQKVDTEM FHKEYAEVFAGDEKWQAIQVPQSDTYEWQADSTYIQHPPFFEHIAEAPPAIADVEQAR VLAVLGDSVTTDHISPAGNIKADSPAGRYLREHGVEPKDFNSYGSRRGNHEVMMRGTF ANIRIKNEMLGGEEGGNTLYVPSGEKLAIYDAAMRYQEDGTPLVIVAGKEYGTGSSRD WAAKGTNLLGVKAVIAESFERIHRSNLVGMGVLPLQFENGQDRKSLKLTGKEVLNIRG LGGELKPHMPLSVEVTREDGSQDSFKVLCRIDTLNEVEYFKAGGILHYVLRSML" misc_feature complement(1700323..1703052) /gene="acnA" /locus_tag="PA1562" /note="aconitate hydratase AcnA; Region: PRK09277" /db_xref="CDD:236445" gene 1703379..1704437 /locus_tag="PA1563" /db_xref="GeneID:879379" CDS 1703379..1704437 /locus_tag="PA1563" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM" /protein_id="NP_250254.1" /db_xref="GeneID:879379" /translation="MNTLLMHCRPGFEGEVCAEIAEHAATLEIPGYAKSKPASAHVEF VCQDADGAERLMRRLRFADLIFPRQWARGPGFIELPESQRIEVLLAELASYPVCGSLW LEVLDTNAGKEVSTFCRKFEKPLRAALVKAGRLQEDPALPRLLLTFRSGREVFVGLAE PRNSALWPMGIPRLKFPREAPSRSTLKLEEAWHQFIPRSEWDKRLAPDMLAVDLGAAP GGWTWQLVNREMRVTAVDNGPMAENLMYSGLVDHQKVDGYQYRPRQRVDWMVCDIVEK PARTGALIETWIGEGLCREAVVNLKLPMKQRYAEVRKILQRLRESFDARGLKVAIGCK QLYHDREEVTCHLRRLER" misc_feature 1703379..1704434 /locus_tag="PA1563" /note="putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional; Region: PRK11760" /db_xref="CDD:236971" gene 1704522..1704761 /locus_tag="PA1564" /db_xref="GeneID:879520" CDS 1704522..1704761 /locus_tag="PA1564" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="sulfurtransferase TusA" /protein_id="NP_250255.1" /db_xref="GeneID:879520" /translation="MTHSVDAILDATGLNCPEPVMMLHNKVRDLAPGGLLKVIATDPS TRRDIPKFCVFLGHELVEQQEEAGTYLYWIRKKAD" misc_feature 1704522..1704755 /locus_tag="PA1564" /note="sulfurtransferase TusA; Region: PRK00299" /db_xref="CDD:178967" misc_feature order(1704546..1704551,1704558..1704560,1704567..1704578, 1704582..1704584) /locus_tag="PA1564" /note="CPxP motif; other site" /db_xref="CDD:239515" gene complement(1704793..1706103) /locus_tag="PA1565" /db_xref="GeneID:879325" CDS complement(1704793..1706103) /locus_tag="PA1565" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_250256.1" /db_xref="GeneID:879325" /translation="MNAAIHPRPAAERAPSYYAATLNEETDYPTLLGAVTVDIAIIGG GFTGVATAVELAERGYKVALVETHRIGWGASGRNGGQVTGSLSGDAAMHKQMRQWLGA EVEDFIWHLRWRGHEIIRQRVEKYGIACDLRHGHLHAAMKASHMGELQASYEEAVRRG MGDQVVLLDKAGVQAHLETELYCGALKNTRNMHLHPLNLCIGEARAAAGLGALIFEHS EVLDIVHGPRPAVITREGRIEAQQILLAGDVYHKLERRQLKGMIFPAMGGIVTTRPLG ELAREINPQGLAVYDCRFVLDYYRPTADGRLLFGGGANYSGRDSRDITAELRPCIERT FPRLKGVEIEFQWSCAMGIVMNRIPQLGKLSDNVWYCQGYSGHGVATSHIMGEIMAKA MSGSLEQFDTFARCKHLRVPLGDLFGNPMLAAGMWYYQLMEKLR" misc_feature complement(1704919..1706001) /locus_tag="PA1565" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" gene complement(1706172..1707536) /locus_tag="PA1566" /db_xref="GeneID:883083" CDS complement(1706172..1707536) /locus_tag="PA1566" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250257.1" /db_xref="GeneID:883083" /translation="MNFACEQEAQDFLAANPDIELFELFILDANGVPRGKLLHRDELL AVYRSGRPLPSTILGLTMNGEDVEDSGLVWDVGDIDCRAYPLSGSLVRLPWRQIPTAA VQVSMHPSEGLPASVADPRHLLVRTIDALKSEGYHPVMAAELEFYLLDRERDANGRPQ PARDADGGRPRATQVYGLRELEQIEPFLADLYAACKAQGLPARTAISEYAPGQVEITL DHGDALAAMDQAIRYKRLVKGIAHKHGMLACFMAKPFDDLAGTGMHLHVSLADEQGHN LFASDDPAGTPLLRQAVGGMLASLLDSLLLFCPNANSYRRFQANSYAPLAQTWGVDNR TVSLRVPGGPASSRHIEHRICGADANPYLAAAALLAGVHRGIREGIDPGAPVEGNGYA QAGKRLPTDWLTALDTLQGSEWAREAFGEPFLGVYLAVKRAEYRQFMGEVGEQDWRWY LTQA" misc_feature complement(1706184..1707536) /locus_tag="PA1566" /note="Glutamine synthetase [Amino acid transport and metabolism]; Region: GlnA; COG0174" /db_xref="CDD:439944" gene complement(1708004..1709401) /locus_tag="PA1567" /db_xref="GeneID:879493" CDS complement(1708004..1709401) /locus_tag="PA1567" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250258.1" /db_xref="GeneID:879493" /translation="MTFRPFWLDQALRSEHAAPCPPLAGDTRADVCIVGGGYTGLWTA IMLKEHDPGLDVVLVEADLCGAGASGRNGGCALSWSAKFFTLERLFGLTEAIRLVKAS EDSIRAIGAFCQRYDVEADYRLDGTLYTATNPAQVGSTDSVIAALERHGINSFAKRPL ADVQRLAGSRRHLEGWFSPAAATVQPGKLVRGLRRVALQLGVRLYEGTPMRGLEHGRP AEVVTPHGRVVAGRVVLALNAWMARAFPQFERSVAIVSSDMLITEPRPDLLQEIGLTS GVSVLDSRIFVHYYHNTPDGRLMLGKGGNTFAYGGRMLPVFDRPSPYLGQLRGSLREF FPEFAEVAIEASWNGPSDRSVTGLPFFGRLDGRDNVFYGFGYSGSGVGPCHMGGQILS SLALGLDNPWTRSPLTQGPLGRFPPEPIRYVGSLMVRNAIRRKEHAEDAGRRPRHLDV RLARFAAAAGKADKG" misc_feature complement(1708046..1709389) /locus_tag="PA1567" /note="putative aminophosphonate oxidoreductase; Region: Phn_aa_oxid; TIGR03329" /db_xref="CDD:274522" gene complement(1709412..1709765) /locus_tag="PA1568" /db_xref="GeneID:879376" CDS complement(1709412..1709765) /locus_tag="PA1568" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250259.1" /db_xref="GeneID:879376" /translation="MHIERFEVVKRRAEMALHGNTVYIGGQVADDPSGDIQDQTRQIL ENIDRLLQSVGSDRGQVLSVRILLAHREDYAGLNQVWDQWFPEGRAPTRACSLAELID PRWRVEMIVVAARPQ" misc_feature complement(1709424..1709738) /locus_tag="PA1568" /note="This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence...; Region: YjgF_YER057c_UK114_like_2; cd06150" /db_xref="CDD:100007" misc_feature complement(order(1709430..1709432,1709436..1709438, 1709442..1709444,1709472..1709498,1709511..1709513, 1709523..1709525,1709532..1709534,1709565..1709567, 1709571..1709573,1709577..1709582,1709586..1709588, 1709688..1709693,1709697..1709699,1709703..1709705, 1709712..1709714,1709718..1709720,1709727..1709732)) /locus_tag="PA1568" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100007" misc_feature complement(order(1709442..1709444,1709487..1709489, 1709532..1709534,1709544..1709546,1709730..1709732)) /locus_tag="PA1568" /note="putative active site [active]" /db_xref="CDD:100007" gene complement(1709821..1711191) /locus_tag="PA1569" /db_xref="GeneID:877922" CDS complement(1709821..1711191) /locus_tag="PA1569" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_250260.1" /db_xref="GeneID:877922" /translation="MNQRPGTALPSSPVSSFQRWRLQIFAITWLAYAAFYFTRKAFSV AKLGIAEDPGFQLDKMAMADLDAIYLAAYAVGQFTWGVLADRFGPRIVVFGGLLISAL AALVMGTFATLPIFATCMVVQGLAQSTGWSGLCKNIGSFFATHERGRVLGLWSTCYAF GGLVASPFAGWWAYSVFGTWHAAFYFSAAVVGGVALLFLLLQRNRPEDVGHPPVEPQA ASEAVRYAGFRPEGGNGGNGGSLQVLAKVVRNRTVLCLGLAYFLLKPARYAILLWGPV IVYERMPALGKVGAAIVPTAFEVAGLLGPILIGFASDKLFGARRMPACVISLLALTVC LALFVPAMTTGSIPIVVGLLFMMGLTLYGPDSMICGSAAIDFGTSEAAGTASGFVNGC GSVGAILGGLLPGYFDTYTVFIGFTIAALIATAVLLPHWNSRPGGARESLRNIPSLAD FRPIRS" misc_feature complement(1709899..1711131) /locus_tag="PA1569" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" misc_feature complement(order(1710001..1710003,1710010..1710015, 1710022..1710027,1710034..1710036,1710085..1710087, 1710097..1710099,1710109..1710114,1710277..1710279, 1710289..1710291,1710376..1710378,1710385..1710393, 1710400..1710405,1710412..1710414,1710706..1710708, 1710715..1710720,1710727..1710729,1710787..1710789, 1710796..1710804,1710808..1710813,1710961..1710963, 1711063..1711065,1711072..1711077,1711084..1711089)) /locus_tag="PA1569" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:349949" gene 1711569..1712450 /locus_tag="PA1570" /db_xref="GeneID:880833" CDS 1711569..1712450 /locus_tag="PA1570" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250261.1" /db_xref="GeneID:880833" /translation="MSVSHAQLKAFHAVAVYGSFTRAAERLFLTQPAVSDQVRKLEER YGVLLFHRNKRSVRLSELGERLLAVTQRLFAIEAEAEELLSASSALQTGTLTLAVDAP VHVLPQIARFCERYPGIAVRVETGNTDESLQRLFSYQADLALLGRDVSDERLLSLTLR NDPIVAFVSLSHPWAGRESIRLADLDDMPLVLREQGSVTRQTLEEEMSRAGLRICPAI QVEGREASREAVVAGIGVGVVSAAEFGADTRVHALPIVDCQRRLTETLVCLREQRSRR IVETFLDLVGEDLPAPS" misc_feature 1711587..1712423 /locus_tag="PA1570" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" misc_feature order(1711887..1711892,1711893..1711898,1711905..1711907, 1711917..1711919,1711923..1711943,1712217..1712234, 1712250..1712255,1712259..1712264) /locus_tag="PA1570" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene complement(1712519..1712698) /locus_tag="PA1571" /db_xref="GeneID:877740" CDS complement(1712519..1712698) /locus_tag="PA1571" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250262.1" /db_xref="GeneID:877740" /translation="MNSQHTDTAKRRVIPFNTQQHTGGAIIDAQGREIPITEVMIQRA CRELDRSLEQEQKQA" gene 1712908..1714053 /locus_tag="PA1572" /db_xref="GeneID:880903" CDS 1712908..1714053 /locus_tag="PA1572" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250263.1" /db_xref="GeneID:880903" /translation="MDMFRLGLVVNPLAGLGGPVALKGSDGVAAEALARGAEPRALER TRIAVECLLPLVEKIEFLTFPGAMGGELLERMGFRHRLLGEWQGAVSSAADTRLAIER LQEAGVALILFAGGDGTARDVAGVVREQQPVLGIPAGVKIHSGVYAISPRAAGELARR LVEGGLVRLASGEVRDLDEEALRAGRVAARWYGEMTVPEEGHFMQHVKQAGMESEELV LVDLADWLAENWEDGVRYVLGPGSTLHGLARNLGLETTLLGVDVLENGAVIARDVDEA RLFELVDGHPAYLLVTAIGGQGHVIGRGNQQISPRVLRAIGLERMRVVATKRKLGTLG GRPLLVDSGDPVLDDSFPDTIRVWAGYKEELLYPLGYAKDQDAPAGA" misc_feature 1712914..1714017 /locus_tag="PA1572" /note="NAD kinase [Nucleotide transport and metabolism]; Region: COG3199" /db_xref="CDD:442432" gene 1714064..1714660 /locus_tag="PA1573" /db_xref="GeneID:877898" CDS 1714064..1714660 /locus_tag="PA1573" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250264.1" /db_xref="GeneID:877898" /translation="MDKDVSGALRRLLLLAMLGLPLVAAAAVEPQRLVDAARAQVGVT LGYDPAYRQLDYPGGDVPLQTGVCTDVVVRALRGQGLDLQKAVHEDMRRHFAAYPQQW GMKGTDRNIDHRRVPNLMTWFSRQGLALAPSRDASAYRAGDIVAWRLDNGLLHIGVLS DRRLEGRPLVLHNIGAGVREEDLLFRYQVIGHYRFPQG" misc_feature 1714130..1714654 /locus_tag="PA1573" /note="Uncharacterized conserved protein YijF, DUF1287 family [Function unknown]; Region: YiijF; COG3738" /db_xref="CDD:442952" gene complement(1714778..1715059) /locus_tag="PA1574" /db_xref="GeneID:878174" CDS complement(1714778..1715059) /locus_tag="PA1574" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250265.1" /db_xref="GeneID:878174" /translation="MFKVNEYFDGTVKSIAFDMTAGPATIGVMAAGEYEFGTSQLEIM HVVAGALTVKLPGSDEWQEYASGSQFTVPANSKFQLKVAQDTAYLCEYR" misc_feature complement(1714787..1715059) /locus_tag="PA1574" /note="Pyrimidine/purine nucleoside phosphorylase YaiE/PpnP, UPF0345/DUF1255 family [Nucleotide transport and metabolism]; Region: PpnP; COG3123" /db_xref="CDD:442357" gene complement(1715154..1715705) /locus_tag="PA1575" /db_xref="GeneID:880887" CDS complement(1715154..1715705) /locus_tag="PA1575" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250266.1" /db_xref="GeneID:880887" /translation="MPHWLVIDLEATTAEGGWPLEEMEIIEIGATLVAAADARELDHF QRFVRPVRRPLLTHFCRDLTHISQANVDGAAHLNTVWEAFERWLAQHRPRLAGWASWG DYDRRQLEQEWRQHGLTSQLSEVPHVNLKQRFGEVRQLPRPVGLNAALQLAGMSFQGQ QHRALEDARNTARLLPLVLPVEH" misc_feature complement(1715166..1715705) /locus_tag="PA1575" /note="3'-5' exonuclease KapD, inhibitor of KinA-controlled sporulation [Signal transduction mechanisms]; Region: KapD; COG5018" /db_xref="CDD:444042" gene 1715809..1716675 /locus_tag="PA1576" /db_xref="GeneID:881949" CDS 1715809..1716675 /locus_tag="PA1576" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="3-hydroxyisobutyrate dehydrogenase" /protein_id="NP_250267.1" /db_xref="GeneID:881949" /translation="MTAVAFLGLGTMGYPMAGHLQREGYDVCVYNRSSAKALRWVEEY AGRRADTPREACAGAELVFCCVGNDDDLRAVALGEQGAFAGMAPGSLFVDHTTASAEV ARELSLLAAERELGFLDAPVSGGQAGAVNGALTVMVGGEEAFYRRAEPLLRSYARMVR RMGDVGSGQLTKMVNQICVAGLLQGLAEALHFARCAGLDGEAAMQVIGKGAAQSWQLE NRHQSMLAGEFDFGFAVDWMRKDLSILLAEARRNGAQLPVTALVDQFYAEVQAMGGGR WDTSSLIARLRS" misc_feature 1715809..1716666 /locus_tag="PA1576" /note="3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase [Lipid transport and metabolism]; Region: MmsB; COG2084" /db_xref="CDD:441687" gene complement(1716682..1717023) /locus_tag="PA1577" /db_xref="GeneID:880905" CDS complement(1716682..1717023) /locus_tag="PA1577" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250268.1" /db_xref="GeneID:880905" /translation="MPVWLQTALLLACSNLFMTFAWYGHLKTLNSKPWIIAALISWGI ALFEYLLQVPANRIGYTELSVGQLKIMQEVITLAIFVPFSVYFMQQPLKLDYLWAGLC LLGAVYFIFRA" misc_feature complement(1716688..1717020) /locus_tag="PA1577" /note="Uncharacterized membrane protein, DMT/DUF486 family [Function unknown]; Region: COG3169" /db_xref="CDD:442402" gene 1717139..1717894 /locus_tag="PA1578" /db_xref="GeneID:881876" CDS 1717139..1717894 /locus_tag="PA1578" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250269.1" /db_xref="GeneID:881876" /translation="MRLHKRSLVWGLALSGLAVVLAAAWWASQASREPALWSELRVPP AFAIPRDFDLGEHRLSWGGKSLALSVAGSARPPLWESEGGFLGAGRESAGRLQLRCQE QSLESFELVGRRLSLKGHLRCADGRLSAYELSFEPRQGGMEVRVALADSELNRVALSW RRGAGERLSGIVDDEVEGRSWVLPAGVAGYWSSAGNAFLGHSTAAQSLDLREPGRVQW RAATESARAWLFAAGNREQWQLRSARLEAETRR" gene 1717998..1718252 /locus_tag="PA1578a" /db_xref="GeneID:17373353" CDS 1717998..1718252 /locus_tag="PA1578a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719745.1" /db_xref="GeneID:17373353" /translation="MQCRAGCGACCIAPSISSPLPGMPAGKPAGVRCLHLDENHLCGL FGRPERPAVCGQFGADPEICGDSREQALALIAEWEVITAA" misc_feature 1718013..1718192 /locus_tag="PA1578a" /note="Putative zinc- or iron-chelating domain; Region: CxxCxxCC; pfam03692" /db_xref="CDD:308985" gene 1718386..1718994 /locus_tag="PA1579" /db_xref="GeneID:880926" CDS 1718386..1718994 /locus_tag="PA1579" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250270.1" /db_xref="GeneID:880926" /translation="MRGILRMTVLAAAVFGVAGNALAEDWKLAKDEDGVKVYLSSVQG SKYKAYRGVTDIKADVATIEALQEDVKGSCKWIHACAEMKLLKQEGADAWTYSKIDMP WPVTGRDVVIHVTTEKTADGTVIRHLKADPTYIPEEKGQIRVPKLVGEWKLQPKGQGV TEVTYQVETEPGGSIPSWLANSFVVDAPLNTLKGLRSAAEKR" misc_feature 1718422..1718985 /locus_tag="PA1579" /note="Uncharacterized subgroup of the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domain family; Region: START_1; cd08876" /db_xref="CDD:176885" misc_feature order(1718470..1718475,1718494..1718496,1718533..1718535, 1718539..1718541,1718572..1718574,1718584..1718586, 1718602..1718604,1718611..1718616,1718620..1718625, 1718677..1718679,1718683..1718694,1718698..1718700, 1718707..1718709,1718713..1718715,1718719..1718721, 1718767..1718769,1718815..1718817,1718821..1718832, 1718836..1718838,1718872..1718874,1718878..1718880, 1718884..1718886,1718890..1718892,1718896..1718898, 1718902..1718904,1718923..1718925,1718929..1718937, 1718941..1718949,1718956..1718961,1718968..1718970) /locus_tag="PA1579" /note="putative lipid binding site [chemical binding]; other site" /db_xref="CDD:176885" protein_bind complement(1718388..1718400) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(1719109..1720395) /gene="gltA" /locus_tag="PA1580" /db_xref="GeneID:882117" CDS complement(1719109..1720395) /gene="gltA" /locus_tag="PA1580" /EC_number="2.3.3.1" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="citrate synthase" /protein_id="NP_250271.1" /db_xref="GeneID:882117" /translation="MADKKAQLIIEGSAPVELPVLSGTMGPDVVDVRGLTATGHFTFD PGFMSTASCESKITYIDGDKGVLLHRGYPIEQLAEKSDYLETCYLLLNGELPTAAQKE QFVGTIKNHTMVHEQLKTFFNGFRRDAHPMAVMCGVIGALSAFYHDSLDINNPKHREV SAHRLIAKMPTIAAMVYKYSKGEPMMYPRNDLNYAENFLHMMFNTPCETKPISPVLAK AMDRIFILHADHEQNASTSTVRLAGSSGANPFACIASGIAALWGPAHGGANEAVLRML DEIGDVSNIDKFVEKAKDKNDPFKLMGFGHRVYKNFDPRAKVMKQTCDEVLQELGIND PQLELAMKLEEIARHDPYFVERNLYPNVDFYSGIILKAIGIPTSMFTVIFALARTVGW ISHWQEMLSGPYKIGRPRQLYTGHTQRDFTALKDRG" misc_feature complement(1719148..1720395) /gene="gltA" /locus_tag="PA1580" /note="citrate synthase; Region: gltA; PRK05614" /db_xref="CDD:180164" gene 1720744..1721130 /gene="sdhC" /locus_tag="PA1581" /db_xref="GeneID:881880" CDS 1720744..1721130 /gene="sdhC" /locus_tag="PA1581" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase subunit C" /protein_id="NP_250272.1" /db_xref="GeneID:881880" /translation="MKKAVNSKRPVNLDLRTIKLPVTAYTSILHRISGVILFLGIAVL LFALDKSLSSEEGFEQVKACLTSPLAKLVIWGLLSALLYHLVAGVRHLVMDAGVGETL EGGKRGSKIVIAIAVVLIVLAGVWVW" misc_feature 1720756..1721127 /gene="sdhC" /locus_tag="PA1581" /note="Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Energy production and conversion]; Region: SdhC; COG2009" /db_xref="CDD:441612" gene 1721124..1721492 /gene="sdhD" /locus_tag="PA1582" /db_xref="GeneID:881923" CDS 1721124..1721492 /gene="sdhD" /locus_tag="PA1582" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase subunit D" /protein_id="NP_250273.1" /db_xref="GeneID:881923" /translation="MVTNVTNFSRSGLYDWMAQRVSAVVLAAYVIFLLGYLIAHPNIS YADWHGLFSQGWMRIFSLLTLVALSVHAWVGMWTISTDYLTSMALGKAATVVRFLFQA VCGMAMFAFFVWGVQILWGM" misc_feature 1721166..1721483 /gene="sdhD" /locus_tag="PA1582" /note="Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase D (SdhD) subunit; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. E. coli SQR, a member of this subfamily, reduces the...; Region: SQR_TypeC_SdhD; cd03494" /db_xref="CDD:239574" misc_feature order(1721181..1721183,1721256..1721258,1721265..1721267, 1721367..1721369,1721454..1721456,1721463..1721465) /gene="sdhD" /locus_tag="PA1582" /note="SdhC subunit interface [polypeptide binding]; other site" /db_xref="CDD:239574" misc_feature order(1721190..1721192,1721202..1721204,1721325..1721327, 1721334..1721336,1721346..1721348) /gene="sdhD" /locus_tag="PA1582" /note="proximal heme binding site [chemical binding]; other site" /db_xref="CDD:239574" misc_feature order(1721232..1721234,1721244..1721246,1721250..1721252) /gene="sdhD" /locus_tag="PA1582" /note="cardiolipin binding site [active]" /db_xref="CDD:239574" misc_feature order(1721355..1721357,1721364..1721369,1721376..1721378) /gene="sdhD" /locus_tag="PA1582" /note="Iron-sulfur protein interface [active]" /db_xref="CDD:239574" misc_feature 1721370..1721372 /gene="sdhD" /locus_tag="PA1582" /note="proximal quinone binding site [chemical binding]; other site" /db_xref="CDD:239574" gene 1721496..1723268 /gene="sdhA" /locus_tag="PA1583" /db_xref="GeneID:881934" CDS 1721496..1723268 /gene="sdhA" /locus_tag="PA1583" /EC_number="1.3.5.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase flavoprotein subunit" /protein_id="NP_250274.1" /db_xref="GeneID:881934" /translation="MASIRTLSFDAIIVGGGGAGMRAALQLAQGGHKTAVVTKVFPTR SHTVSAQGGITCAIASADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELE HMGLPFSRTETGRIYQRPFGGQSKDFGKGGQAARTCAAADRTGHALLHTLYQANLKNG TSFLNEWYAVDLVKNQDGAVVGIIAICIETGETVYIRSKAVVLATGGAGRIYASTTNA LINTGDGVGMALRAGVPVQDIEMWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFM ERYAPNAKDLAGRDVVARSMVKEVLAGNGVGPNKDHVLLKLDHLGEEVLHSRLPGICE LSKTFAHVDPVVAPIPVIPTCHYMMGGVATNIHGQAITQDANGNDQIVEGLFAVGEVA CVSVHGANRLGGNSLLDLVVFGRAAGLHLEKALKEGIDARGASESDLEASFKRLNGVN ERTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIAQLADLRERIANVKINDKSQAF NTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDENWLCHTLYFPGEK RVSKRSVNFAPKTVPAFEPKVRTY" misc_feature 1721574..1723265 /gene="sdhA" /locus_tag="PA1583" /note="succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Region: sdhA_forward; TIGR01816" /db_xref="CDD:130875" gene 1723280..1723987 /gene="sdhB" /locus_tag="PA1584" /db_xref="GeneID:882034" CDS 1723280..1723987 /gene="sdhB" /locus_tag="PA1584" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase iron-sulfur subunit" /protein_id="NP_250275.1" /db_xref="GeneID:882034" /translation="MLQVSVYRYNPDKDAAPYMQDFQVDTNGKDVMVLDVLALIKEQD EGFSYRRSCREGVCGSDGMNINGKNGLACITPLSAAGLKGGKLVIRPLPGLPVIRDLV VDMSIFYKQYEKVKPFLQNDTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFW WNPDKFLGPAALLQAYRFLADSRDTKTEERLASLDDPFSVFRCRGIMNCVNVCPKGLN PTKAIGHVRNMLLQSGT" misc_feature 1723286..1723984 /gene="sdhB" /locus_tag="PA1584" /note="succinate dehydrogenase iron-sulfur subunit; Reviewed; Region: sdhB; PRK05950" /db_xref="CDD:235652" gene 1724244..1727075 /gene="sucA" /locus_tag="PA1585" /db_xref="GeneID:881879" CDS 1724244..1727075 /gene="sucA" /locus_tag="PA1585" /EC_number="1.2.4.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-oxoglutarate dehydrogenase subunit E1" /protein_id="NP_250276.1" /db_xref="GeneID:881879" /translation="MHESVMQRMWNSAHLSGGNAAYVEELYELYLHDPNAVPEEWRTY FQKLPADGNPAPDVSHSTVRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIHA YRLRGHQASTLDPLGLWQRPAPADLSIDHYGLTGADLDTTFRTGELYIGKEEATLREI VDSLKSTYCGTFGAEFMHIVDSEQRKWFLQRLESVRGRPGFSAEARAHLLERLTAAEG LEKYLGTKYPGTKRFGLEGGESLIPMVDEIIQRCGSYGAKEIVIGMAHRGRLNVLVNT LGKNPRDLFDEFEGKKIVELGSGDVKYHQGFSSNVMTSGGEVHLALAFNPSHLEIVSP VVEGSVRARQDRRKDSSGDKVVPISIHGDAAFAGQGVVMETFQMSQTRAYKTGGTIHL VINNQVGFTTSRQDDARSTEYATDVAKMIQAPIFHVNGDDPEAVLFVTQLAVDYRMQF KRDVVIDLVCYRRRGHNEADEPSGTQPLMYQQIAKQRTTRELYADALVNAGVLSAEQV QSKIDDYRDALDNGLHVVKSLVKEPNKELFVDWRPYLGHAWTARHDTRFDLKTLQELS SKMLEVPEGFVVQRQVSKIYEDRQKMAAGGLPINWGFAETLAYATLLFEGHPVRMTGQ DVGRGTFSHRHAVLHNQKDDSVYVPLANLFDGQPRLDIYDSFLSEEAVLAFEYGFATT TPNSLVIWEAQFGDFANGAQVVIDQFITSGESKWGRLCGLTMLLPHGYEGQGPEHSSA RLERYLQLCAEQNIQVCVPTTPAQVYHMLRRQVIRPLRKPLVVMTPKSLLRHKLAIST LEDLANGSFQTVIPEIDSLDPKKVDRVVLCSGKVYYDLLEKRRAEGREDTAIVRIEQL YPFPEDDLAEVLAPYKNLKHIVWCQEEPMNQGAWFCSQHHMRRVIAAHKKGLNLEYAG REGSAAPACGYASMHAEQQEKLLQDAFTV" misc_feature 1724256..1727072 /gene="sucA" /locus_tag="PA1585" /note="2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]; Region: SucA; COG0567" /db_xref="CDD:440333" protein_bind complement(1724393..1724405) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 1724428..1724440 /gene="sucA" /locus_tag="PA1585" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(1726258..1726270) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(1726300..1726312) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1727118..1728347 /gene="sucB" /locus_tag="PA1586" /db_xref="GeneID:881930" CDS 1727118..1728347 /gene="sucB" /locus_tag="PA1586" /EC_number="2.3.1.61" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase" /protein_id="NP_250277.1" /db_xref="GeneID:881930" /translation="MAIEIKAPTFPESVADGTVATWHKKPGEAVKRDELIVDIETDKV VIEVLAEADGVLAEIIKNEGDTVLSNELLGKLNEGGAAAPAAPAAAAPAAAPAAQAAA PAAAGGDDAILSPAARKLAEEAGIDPNSIAGTGKGGRVTKEDVVAAVEAKKNAPAAPA KPAAPAAEAPIFAAGDRVEKRVPMTRLRAKVAERLVEAQSAMAMLTTFNEVNMKPIMD LRSKYKDLFEKKHNGVRLGFMSFFVKAATEALKRFPGVNASIDGNDIVYHGYQDIGVA VSSDRGLVVPVLRNAEFMSLAEIEGGIANFGKKAKEGKLTIEDMTGGTFTISNGGVFG SLLSTPIVNPPQTAILGMHKIQERPMAVNGQVVILPMMYLALSYDHRLIDGKEAVSFL VAIKDLLEDPARLLLDV" misc_feature 1727118..1728344 /gene="sucB" /locus_tag="PA1586" /note="2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase; Region: PRK05704" /db_xref="CDD:235571" gene 1728416..1729852 /gene="lpdG" /locus_tag="PA1587" /db_xref="GeneID:882090" CDS 1728416..1729852 /gene="lpdG" /locus_tag="PA1587" /EC_number="1.8.1.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-oxoglutarate dehydrogenase complex dihydrolipoyl dehydrogenase" /protein_id="NP_250278.1" /db_xref="GeneID:882090" /translation="MSQKFDVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVA LGGTCLNVGCIPSKALLDSSYKYHEAKEAFKVHGIEAKGVTIDVPAMVARKANIVKNL TGGIATLFKANGVTSFEGHGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPP APLTDDIIVDSTGALEFQAVPKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLP AADEQIAKEALKVLTKQGLNIRLGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVA VGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEG VMVAERIAGHKAQMNYDLIPSVIYTHPEIAWVGKTEQTLKAEGVEVNVGTFPFAASGR AMAANDTTGLVKVIADAKTDRVLGVHVIGPSAAELVQQGAIGMEFGTSAEDLGMMVFS HPTLSEALHEAALAVNGHAIHIANRKKR" misc_feature 1728416..1729831 /gene="lpdG" /locus_tag="PA1587" /note="dihydrolipoamide dehydrogenase; Validated; Region: PRK06327" /db_xref="CDD:235779" gene 1730181..1731347 /gene="sucC" /locus_tag="PA1588" /db_xref="GeneID:882016" CDS 1730181..1731347 /gene="sucC" /locus_tag="PA1588" /EC_number="6.2.1.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="succinyl-CoA ligase subunit beta" /protein_id="NP_250279.1" /db_xref="GeneID:882016" /translation="MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKIGGSEWV VKAQVHAGGRGKAGGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCT DIDKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQG RELAFQLGLKGDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINI DSNALYRQPKLRAMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIV NLHGGKPANFLDVGGGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIG AVKEVGVKVPVVVRLEGNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEGK" misc_feature 1730181..1731344 /gene="sucC" /locus_tag="PA1588" /note="ADP-forming succinate--CoA ligase subunit beta; Region: sucC; PRK00696" /db_xref="CDD:234813" gene 1731347..1732234 /gene="sucD" /locus_tag="PA1589" /db_xref="GeneID:882039" CDS 1731347..1732234 /gene="sucD" /locus_tag="PA1589" /EC_number="6.2.1.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="succinyl-CoA ligase subunit alpha" /protein_id="NP_250280.1" /db_xref="GeneID:882039" /translation="MSVLINKDTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG GTTHLGLPVFNTVKEAVEATGAEASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPT LDMLDAKVKCDELGVRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYE AVKQTTDAGFGQSTCVGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEA AAFIKANVTKPVVSYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRS LADIGKALAELTGWEVKKA" misc_feature 1731350..1732207 /gene="sucD" /locus_tag="PA1589" /note="Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]; Region: SucD; COG0074" /db_xref="CDD:439844" gene 1732545..1733858 /gene="braB" /locus_tag="PA1590" /db_xref="GeneID:882083" CDS 1732545..1733858 /gene="braB" /locus_tag="PA1590" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="branched-chain amino acid transporter" /protein_id="NP_250281.1" /db_xref="GeneID:882083" /translation="MTHLKGFDLLALGFMTFALFLGAGNIIFPPSAGMAAGEHVWSAA FGFLLTGVGLPLLTVVALARVGGGIGRLTQPIGRRAGVAFAIAVYLAIGPLFATPRTA VVSFEMGVAPFTGDGGVPLLIYTVAYFSVVLFLVLNPGRLVDRVGKVITPVLLSALLV LGGAAIFAPAGEIGSSSGEYQSAPLVQGFLQGYLTMDTLGALVFGIVIATAIRDRGIS DSRLVTRYSMIAGVIAATGLSLVYLALFYLGATSQGIAGDAQNGVQILTAYVQQTFGV SGSLLLAVVITLACLTTAVGLITACGEFFSDLLPVSYKTVVIVFSLFSLLVANQGLTQ LISLSVPVLVGLYPLAIVLIALSLFDRLWVSAPRVFVPVMIVALLFGIVDGLGAAKLN GWVPDVFAKLPLADQSLGWLLPVSIALVLAVVCDRLLGKPREAVA" misc_feature 1732545..1733837 /gene="braB" /locus_tag="PA1590" /note="Branched-chain amino acid permease [Amino acid transport and metabolism]; Region: BrnQ; COG1114" /db_xref="CDD:440731" gene 1734004..1734768 /locus_tag="PA1591" /db_xref="GeneID:881994" CDS 1734004..1734768 /locus_tag="PA1591" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250282.1" /db_xref="GeneID:881994" /translation="MTAELGIFNGHLLQHLLAALWFLFCWVGYTRYATWKGRDTACLA SVLHLYREDWMRRLLLRDNRIADASVIGNLERNASFFASSTLIILAGILTLLGSTDRA VSVLADLPFVEEASRGLSELKLLCLAVVFVYAFFTFSWCMRQYNFAAILVGSAPMIGE RNVGELERKSFAERAARVISLAANQFNFGLRSYYFGLAMLAWFINSWFFMLVTAGVVL VLYRREFHSDVLEVMVYTETAIAESPREGEGEVPRG" misc_feature 1734064..1734702 /locus_tag="PA1591" /note="Uncharacterized membrane protein [Function unknown]; Region: COG3821" /db_xref="CDD:443033" gene complement(1734827..1735063) /locus_tag="PA1592" /db_xref="GeneID:882056" CDS complement(1734827..1735063) /locus_tag="PA1592" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250283.1" /db_xref="GeneID:882056" /translation="MKKTVTLALLLAASLGLAACDKKEEDKAAAPAAPATETQPSAPA TPPAEPSAPAPSSDTPATPQTPAPTPEQPQQNQQ" gene 1735236..1735709 /locus_tag="PA1593" /db_xref="GeneID:882008" CDS 1735236..1735709 /locus_tag="PA1593" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250284.1" /db_xref="GeneID:882008" /translation="MSENPLLERARRFLSALRHCQVLGLTVEAADEKGLTLRLPYSQA IIGNPESGVVHGGAITTLMDTTCGISTVCVLPDFEICPTLDLRIDYMHPAEPHKDVYG FAECYRVTPNVIFTRGFAYQDDPGQPIAHVVGAFMRMGGSARAGAARPAAQGGAA" misc_feature 1735236..1735658 /locus_tag="PA1593" /note="Acyl-CoA thioesterase PaaI, contains HGG motif [Secondary metabolites biosynthesis, transport and catabolism]; Region: PaaI; COG2050" /db_xref="CDD:441653" gene 1735706..1736152 /locus_tag="PA1594" /db_xref="GeneID:882160" CDS 1735706..1736152 /locus_tag="PA1594" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250285.1" /db_xref="GeneID:882160" /translation="MSPTSLEQLVRDARRNNDYSPLVELIPYAKLLGIECLRLGDDMV FRLPANKDNIGNPTLPAIHGGVIAGFMEHAAMLHLLTFMSIPHLPKIIDFSIDYLRAG HFRDTYAQCQVWRQGRRVANVAINAWQTTQGEPIATARAHFKVDEP" misc_feature 1735769..1736140 /locus_tag="PA1594" /note="Acyl-CoA thioesterase PaaI, contains HGG motif [Secondary metabolites biosynthesis, transport and catabolism]; Region: PaaI; COG2050" /db_xref="CDD:441653" gene 1736189..1737418 /locus_tag="PA1595" /db_xref="GeneID:881902" CDS 1736189..1737418 /locus_tag="PA1595" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250286.1" /db_xref="GeneID:881902" /translation="MDALLILGGLLLMVAGYIWVIVLAFGTGLLWGYGSLFPPVALAY IGVHWRTARKGVGLAALGCIPLVVGLALLASHDAARLEAILSLRWLKPEARPPAELAI ALSGEFNGKPFAPQSGELIGGVLSLRQGHDFYAQRELQIRLPAQPLGALRLDVLPEDG GALPEVELSWLQPDQDLPEARRLLRGYTLHLDLRPKAPNRLEGEFHLSLPSDYRTTLS GHVELYTDRLRYRHGKVDLGYDSDDTLALVLRDYLQRRFASRDVSLVRAPSWRAASHA RPLRIEALVAGQAQVLELTLEKNARREWTVRGDAFPALPAEPATVAAAAPPEPQALPA PGNATLDLELVQVEPQRYSQRLVKATTVRGRIAEGRFTGLDSEGRLVIRREMPGAGEA SYLLRPAEIARLELLER" gene 1737536..1739440 /gene="htpG" /locus_tag="PA1596" /db_xref="GeneID:881933" CDS 1737536..1739440 /gene="htpG" /locus_tag="PA1596" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="chaperone protein HtpG" /protein_id="NP_250287.1" /db_xref="GeneID:881933" /translation="MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASD AADKLRFEALANPELLEGGAELKIRVSFDKEANTVTLEDNGIGMSREDVVTHLGTIAK SGTADFLKNLSGDQKKDSHLIGQFGVGFYSAFIVADKVDVYSRRAGQPASEGVHWSSK GEGEFDVATIDKPERGTRIVLHLKKGEEEFADGWRLRNVIKKYSDHIALPIELPKEFH GEEADKPAEPEWETVNRASALWTRPRAEVKDEEYQEFYKHVAHDFENPLSWSHNKVEG KLEYTSLLYVPGRAPFDLYHREAPRGLKLYVQRVFIMDQADEFLPLYLRFIKGVVDSN DLSLNVSREILQKDPVIDSMKSALTKRVLDMLEKLAKNEPEQYKTFWKNFGQVLKEGP AEDFGNKEKIAGLLRFASTGDDSGEQSVALADYIGRMKEGQDKIYYLTGESYSQVKNS PHLEVFRKKGIEVLLLTDRIDEWLMSYLPEFDGKQFVDVARGDLDLGSLDSEEDKKAQ EEVAKSKEGLIERLKKVLDEQVSEVRVSHRLTDSPAILAIGEQDLGLQMRQILEASGQ KVPDSKPIFEINPQHPLIEKLDAEPDEDRFGELSHILFDQAALAAGDSLKDPGAYVRR LNKLLVELSA" misc_feature 1737548..1739437 /gene="htpG" /locus_tag="PA1596" /note="heat shock protein 90; Provisional; Region: PRK05218" /db_xref="CDD:235366" gene 1739508..1740233 /locus_tag="PA1597" /db_xref="GeneID:879572" CDS 1739508..1740233 /locus_tag="PA1597" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250288.1" /db_xref="GeneID:879572" /translation="MSEIRVEPVAYDIDGQPYEGQLVYDASHAGPRPGLLMAPNWMGV SAAALDIARQVAGRGHVVLVADLYGRDVRPQNGDEAGAAMMPLKNDRALLRKRMQAAL AALRGQALAAVDTTRQAAFGFCFGGCCALELARDGAELKAFVSFHGTLDTPDPAHARN IKGAVLVLDGASDPLVPREQLPAFAREMTDAGVDWQLTSYGGAVHSFTDPNAKLPGKM HYDARTSRRAFQAMDDLLAEVFA" misc_feature 1739517..1740218 /locus_tag="PA1597" /note="Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism]; Region: DLH; COG0412" /db_xref="CDD:440181" gene complement(1740244..1741065) /locus_tag="PA1598" /db_xref="GeneID:882137" CDS complement(1740244..1741065) /locus_tag="PA1598" /EC_number="2.1.2.11" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="3-methyl-2-oxobutanoate hydroxymethyltransferase" /protein_id="NP_250289.1" /db_xref="GeneID:882137" /translation="MSSHRPQHRLSVPDIQRRKGAGSLVALTAYSTPMARLLDPHADL LLVGDSLGMVLYGMPSTLGVSLEMMVAHTLAVMRGSRRACVVADLPFASYQESPRQAF RNAARLLADSGAQAVKLEGGEEMEETVDFLVRRGIPVLAHIGLMPQQVNAMGGFKAQG RDPESAERVRRDGLAMQRGGAFAVVIEGVGEPLARRLSEELAIPCIGIGASPACDGQV LVSEDLLGLSGEQVPRFVERYARLDREIDEAARRFAEDVRERRFPEARHCFAMRE" misc_feature complement(1740256..1741041) /locus_tag="PA1598" /note="3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed; Region: panB; PRK00311" /db_xref="CDD:234723" gene 1741146..1741928 /locus_tag="PA1599" /db_xref="GeneID:881946" CDS 1741146..1741928 /locus_tag="PA1599" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250290.1" /db_xref="GeneID:881946" /translation="MPQTGQERDLPRFRSLPCAVYLRAFEMPAGHRVEMHDHPWGQLM YAASGTLRASTERHSYLVPAQRALWIPPGVRHAAEACNPVLFRSLYLDRSLPGGCRVL EVSGLLRELLLRAAEFPREYPPGGEAERLMQVVADEVGRLREAPLNLPLPGDPRLRRI TDALQADPADPRGISDWAGLVGASRRTLARLFREQTQLSFREWRQRLRLLNAVAALEE GASVTRVASDLGYDSTSAFISLFQRHFGQTPGCFARSLRLPN" misc_feature 1741203..1741460 /locus_tag="PA1599" /note="AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain; Region: cupin_NimR-like_N; cd06124" /db_xref="CDD:380379" misc_feature 1741656..1741895 /locus_tag="PA1599" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene complement(1741939..1743240) /locus_tag="PA1600" /db_xref="GeneID:881945" CDS complement(1741939..1743240) /locus_tag="PA1600" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cytochrome C" /protein_id="NP_250291.1" /db_xref="GeneID:881945" /translation="MKKATRIGLWASGSLVALAAIALGYAWQPAIAPLEGTPGPFSAE QIARGERLAALGDCAVCHTREGGPRNAGGRALPTPFGTIYSSNLTPDRASGIGGWSYP AFERAMRHGVARDGSYLYPAFPYTAFTRTRDEDLKALYAYLMSQPAVHSETPANQLPF PFDQRQLMAGWNLLFLDPGAYRDEPTRNQQWNRGAYLAEGLGHCSACHSPRNALGAEK SGSAHFAGGEAEGWTAPALNASSPAPIAWSEEALYAYLRHGYSAYHGVASGPMAPVVG EGLAKQPDEDLRALAHYLASYAAAPAGETDQQQAQRLDRQGYGRVQPPSGSGARLFAG ACLACHHDGDGPRFFGVRPSLALNSNVHADSPDNLLRIILDGIHSPATGDLGYMPGFR HSLDDRQVATLANYLRERFAGKPAWPDLAAKAASLRRQAAP" misc_feature complement(1742806..1743102) /locus_tag="PA1600" /note="Cytochrome c; Region: Cytochrom_C; pfam00034" /db_xref="CDD:459641" misc_feature complement(1742002..1742550) /locus_tag="PA1600" /note="Cytochrome c, mono- and diheme variants [Energy production and conversion]; Region: CccA; COG2010" /db_xref="CDD:441613" gene complement(1743290..1745536) /locus_tag="PA1601" /db_xref="GeneID:881921" CDS complement(1743290..1745536) /locus_tag="PA1601" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase" /protein_id="NP_250292.1" /db_xref="GeneID:881921" /translation="MSLANPSRRGFLKAGGLLLVTVNLPAPLLALAEQGATDLPLDQV DSFIAIAADGKVTAFCGHVDLGTGIRTALAQIVAEELDVAFEQVEMILGDTRRTPDQG PTIASASIQVSAVPLRQAAAEARRFLLRQAGSHFPVHPDSLRSENGQVFAAANPQRRI GYGELLRGQRFNLNIDGKAPLKPRSEYRLVGKPVRRVDIPAKLTGQLTYVHDMRLPGM LHGRVVRPPYTGADVSAPLGSGLLAVDESSVAGLPGLVKVVVIGDFVGVVCEREEQAI RAARQLKVRWKDWQGLPPLEPDRLEDTLRRHPKKPRTLHDSPGLEQHLAGIARPLSAT YVWPYQLHASIGPSCALAEVDAQRARVWSGTQNPHDLRNDLARLLQRETGDIEVIRME AAGCYGRNGADDVSADAVLLAQTVGRPVRVQLMREQEHGWEPKGTAQLIEVRGGLDEQ GRVAAYDFATCYPSNGAPTLALLLTGRIPATPQVADMGDRTAIPQYRYPRMRVVANDA APIVRASWMRGVSALPNVFAHESYVDELAHLAGIDPIAFRRRYLDDQRALALIDALVA RAGWQPRTSPNPEARRDGVLKGRGFAYARYFHSKFPGFGAAWAAWIVDVEVNPENGAV RVAKVWVAHDCGQMVNPDGVRHQVHGNVIQSTSRVLKEFATFDRRGVTSLEWGGYPIL GFPELPEIDVLLLDRPEQPPMGAGESASVPSAAAIANAIFDATGARLRQVPFTPERVL AALRSARA" misc_feature complement(<1745042..1745395) /locus_tag="PA1601" /note="Molybdopterin cofactor-binding domain; Region: MoCoBD_2; pfam20256" /db_xref="CDD:466407" misc_feature complement(1743305..1744993) /locus_tag="PA1601" /note="Aldehyde, CO or xanthine dehydrogenase, Mo-binding subunit [Energy production and conversion]; Region: CoxL; COG1529" /db_xref="CDD:441138" gene complement(1745533..1746024) /locus_tag="PA1602" /db_xref="GeneID:881916" CDS complement(1745533..1746024) /locus_tag="PA1602" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_250293.1" /db_xref="GeneID:881916" /translation="MSDALALTVNGQSLRLDVAPDTPLLYVLRNDLQLNGPKFGCGLG ECGACTVLMDGVATRSCITPVEAAVGRRVVTLEGLGDAAHPHPLQQAFIDEQAAQCGY CINGMVMTAKALLDRNPNPSDGEIRQELAYNLCRCGTHVEILKAVRRAAESLKEHQEE HPA" misc_feature complement(1745557..1746006) /locus_tag="PA1602" /note="Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and conversion]; Region: CutS; COG2080" /db_xref="CDD:441683" gene complement(1746231..1746653) /locus_tag="PA1603" /db_xref="GeneID:881931" CDS complement(1746231..1746653) /locus_tag="PA1603" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250294.1" /db_xref="GeneID:881931" /translation="MSRTTPYRLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAAL VRLGETGPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAG RAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI" misc_feature complement(1746234..1746653) /locus_tag="PA1603" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" protein_bind complement(1746653..1746665) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(1746666..1746678) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(1746692..1747597) /locus_tag="PA1604" /db_xref="GeneID:881924" CDS complement(1746692..1747597) /locus_tag="PA1604" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250295.1" /db_xref="GeneID:881924" /translation="MAFLLIGLSEHRPLPLGQGSPLRWLALLFGLLAWHAGAGERVIY PRHSEGRNPEPYVVELLQLALARSGGDYRLEPSAQPMPQSRAQLRLEQDDPGLQVMWA QSRDDLEETLLPIRIPIYRGLIGWRIPLVSAANKDILASARTLDDLRRLRFGQRQDWA DTPILRANGLEVKTSQNYESLFRMLDAGRFEVFPREVVVIDGELEDASRAGLHLAIDQ HLALHYPAAFYFFVSRQRPELAEAIRQGLEKAIADGSFERLFERHFKTRLEKLALRQR RIIELKNPYLPGKTPFQREALWYRP" misc_feature complement(1746800..1747432) /locus_tag="PA1604" /note="ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:440596" gene 1747596..1748630 /locus_tag="PA1605" /db_xref="GeneID:881963" CDS 1747596..1748630 /locus_tag="PA1605" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250296.1" /db_xref="GeneID:881963" /translation="MAGPRTRALFSTLFALSLVTSLTHARDYRYSDAHVHYVDFFQES EGMPRLLEAMDKGRVDHVMLSGVAVAKKWHEDEPKRPRYYAGDDAGAYWYSATDVIVA AAVKSLPAEQRRRVHPFLTGFNPTDKNADAHIRRMLELDPGLWQGIGEIFTRHDDLTA LTYGDVPRANNEALARVYHLAAEFDLPVLLHANVTSKRERNPLYLAEIEEPLRNHPHV RFIWAHAGTSMEIHRHQKKLDFLLPTLRRLLQRYPNLYIDLSWSVLRPYLLDEQGKPD PQWLALVERFPQRFMLGSDVVGQFDSLPELMASFDPFLDALPEQVARQVARDNFLAVL PRQPADPRGE" misc_feature 1747689..1748597 /locus_tag="PA1605" /note="5-carboxyvanillate decarboxylase LigW (lignin degradation), amidohydro domain [Carbohydrate transport and metabolism]; Region: LigW; COG2159" /db_xref="CDD:441762" gene 1748699..1749175 /locus_tag="PA1606" /db_xref="GeneID:881958" CDS 1748699..1749175 /locus_tag="PA1606" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250297.1" /db_xref="GeneID:881958" /translation="MSFIRSCISRSVFLLGAGVAVAAQAEVRIDGPIEYGVFESRYQD FQPGERVLTRSEQNIQQTTEVPAKLGTKFGMRYQLSGKQEGDTPLTLLYLTPGVVTPD GQRHDKFEVVQKLVPGAPTDVMAYEFTEPHEVVKGEWRLMVFQGDRLLAEKSFDVR" misc_feature 1748777..1749169 /locus_tag="PA1606" /note="Domain of unknown function (DUF3859); Region: DUF3859; pfam12975" /db_xref="CDD:432912" gene complement(1749349..1749789) /locus_tag="PA1607" /db_xref="GeneID:881971" CDS complement(1749349..1749789) /locus_tag="PA1607" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250298.1" /db_xref="GeneID:881971" /translation="MVKRTSHKQASCPVARPLDVIGDGWSMLIVRDAFEGLTRFGEFQ KSLGLAKNILAARLRNLVEHGVMVAVPAESGSHQEYRLTDKGRALFPLLVAIRQWGED YFFAPDESHVRLVERDSGQPVPRLQVRAGDGSPLAAEDTRVSRD" misc_feature complement(1749466..1749783) /locus_tag="PA1607" /note="DNA-binding transcriptional regulator, HxlR family [Transcription]; Region: HxlR; COG1733" /db_xref="CDD:441339" gene complement(1749895..1751520) /locus_tag="PA1608" /db_xref="GeneID:881919" CDS complement(1749895..1751520) /locus_tag="PA1608" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_250299.1" /db_xref="GeneID:881919" /translation="MSLRSMPIATRAALSFALITALLVITGIFSLNRMGSLNEASSDI SDNWLPSVRESAELNVLLAELRQVQLAHVLAADDSSKRFLESRMTEIGKELTDREGAY QRLISGADERSIYERYLATRQTLLQSQQTLVQMSRSKPLEETRQYTESTLLDQYRATQ QQLQALIDFNVKGASQASHTADEVYHSAFAAVIGVLLVAGLATVVLAWLFTRSITQPL GEALRVAEVIASGDLTSRIDTSGRDEPAKLLVALQGMQAQLRQTIQQIGSSATQLASA AEELSAVTEQGNRSLTQQNDEIQMAATAVNEMTAAVEEVARNASSTSDASSASEQSAQ NGRQRVLETVQAIRLMSEEVDNTSALVGGLAEKAQDISKVLDVIRGIAEQTNLLALNA AIEAARAGEQGRGFAVVADEVRALAHRTQESTREIEQMIANIQEGTGAAVGAMDSSSV RARNMLEIAEAAGLALNEIAERVGQINERTLVIASASEQQAQVAREVDRNLVNIRDIS LQTSAGSNQTAAASQELSQLAIDLNNMVTRFVV" misc_feature complement(1749898..1751484) /locus_tag="PA1608" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene complement(1751674..1752891) /gene="fabB" /locus_tag="PA1609" /db_xref="GeneID:881925" CDS complement(1751674..1752891) /gene="fabB" /locus_tag="PA1609" /EC_number="2.3.1.41" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="3-oxoacyl-ACP synthase" /protein_id="NP_250300.1" /db_xref="GeneID:881925" /translation="MRRVVITGLGIVSCLGNDKDTVSANLRAGRPGIRFNPSYAEMGL RSHVSGSVDLNLEELIDRKVFRFMGDAAAYAYLAMEQAIKDSGLTPEQISNPRTGLIA GSGGASTLNQMEAIDTLREKGVKRIGPYRVTRTMGSTVSACLATPFQIKGVNYSISSA CATSAHCIGQAMEQIQLGKQDVVFAGGGEEEHWSQSCLFDAMGALSTQYNETPEKASR AYDAKRDGFVIAGGGGMVVVEGLEHALKRGAKIYAEIVGYGATSDGYDMVAPSGEGAI RCMQQALATVDAPIDYLNTHGTSTPVGDVAEIRGVREVFGDKAPAISSTKSLSGHSLG AAGVHEAIYCLLMMEGGFIAGSANIDELDPEVADLPILRETRENAKLDTVMSNSFGFG GTNATLVLKRWQG" misc_feature complement(1751677..1752891) /gene="fabB" /locus_tag="PA1609" /note="beta-ketoacyl-ACP synthase I; Region: PRK07967" /db_xref="CDD:181184" misc_feature complement(order(1751710..1751712,1751716..1751718, 1752061..1752063,1752097..1752111,1752286..1752291, 1752298..1752300,1752361..1752363,1752370..1752375, 1752382..1752384,1752418..1752426,1752430..1752432, 1752436..1752438,1752454..1752456,1752466..1752468, 1752478..1752480,1752496..1752498,1752532..1752537, 1752541..1752543,1752553..1752558,1752577..1752579)) /gene="fabB" /locus_tag="PA1609" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238430" misc_feature complement(order(1751899..1751901,1752004..1752006, 1752409..1752411)) /gene="fabB" /locus_tag="PA1609" /note="active site" /db_xref="CDD:238430" gene complement(1752903..1753418) /gene="fabA" /locus_tag="PA1610" /db_xref="GeneID:881984" CDS complement(1752903..1753418) /gene="fabA" /locus_tag="PA1610" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="3-hydroxydecanoyl-ACP dehydratase" /protein_id="NP_250301.1" /db_xref="GeneID:881984" /translation="MTKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISD VGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGR GRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGL RVGLFTSTDSF" misc_feature complement(1752906..1753418) /gene="fabA" /locus_tag="PA1610" /note="bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase; Region: PRK05174" /db_xref="CDD:179953" misc_feature complement(order(1753101..1753112,1753143..1753148, 1753155..1753160,1753167..1753169,1753335..1753343)) /gene="fabA" /locus_tag="PA1610" /note="active site 1 [active]" /db_xref="CDD:238614" misc_feature complement(order(1753071..1753076,1753080..1753082, 1753086..1753112,1753167..1753169,1753179..1753181, 1753332..1753334,1753338..1753340)) /gene="fabA" /locus_tag="PA1610" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238614" misc_feature complement(order(1753071..1753082,1753182..1753190)) /gene="fabA" /locus_tag="PA1610" /note="active site 2 [active]" /db_xref="CDD:238614" gene complement(1753607..1755562) /locus_tag="PA1611" /db_xref="GeneID:881906" CDS complement(1753607..1755562) /locus_tag="PA1611" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sensor/response regulator hybrid protein" /protein_id="NP_250302.1" /db_xref="GeneID:881906" /translation="MSQRHGWDIRTRMLAISLGPALLLTLLLTAYFTYSRLQDLRQEL THTGQLIADQLAPAAEYGVIAGNTPVLQKLLQATLDTPHVRFIEVRDRNDNILVYVEQ LSGALQNAAPIDIFHSTIQRQRIALASDPLLDGASEGDGQSGEDYLGRVVVGMSNDAF SQRQQEILLKAALLAAFALILTFLVARRLAQRLSAPISTMGQAVEAIQSGDYKTSLPI LDDGEIGDLARHINNLASGLDRASREQEQAIGQLISAREEAEQANRAKSDFLAMMSHE LRTPMNGVLGMLQLLETTEQTREQAEYTALATESTEHLLKVINDILDFSRIERGALEL ECIPFNLLELVQGSALVFQHSAQQRGLALELQIQAGLENIEVCGDPTRIRQILVNLLG NALKFTEEGAIHLSLEWQALDHDVLWLTCAVHDSGIGISPERLEHMFDAFQQADSSIS RRYGGTGLGLAIARTLAERMGGTLQAESKEGSGSTFTLEIPLPFQQSPAHRQQAAGDA APVAAGQEILLVEDNPVNQTVIEAMLRSLGYRVTLVADGIQAVRSAERQRYDAILMDC RLPVLDGYSATREIRAQENGRRVPIIALTANALQGDRENCLQAGMNDYLAKPFKRAEL QRILQRWIGSQPELPVTSNETGRGEPE" misc_feature complement(1753631..1755535) /locus_tag="PA1611" /note="hybrid sensory histidine kinase BarA; Provisional; Region: PRK11107" /db_xref="CDD:236848" gene complement(1755559..1756317) /locus_tag="PA1612" /db_xref="GeneID:881979" CDS complement(1755559..1756317) /locus_tag="PA1612" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250303.1" /db_xref="GeneID:881979" /translation="MELRTPAALAEGTVFNDDTRLLLLGPEALAWRLRQHRAPPTLAL LLNRVDGQRLLPGANGHGGHGVGGLCVLWSDPPAARQLRLARLILPGIQRIGVLYGKD SEFLLDELRREARSQGLELFVASSSGNDDPRPLQFLLGNSDLLLGIDDKQLYNSQSIK SLLLGSYAKNRALLGPTAAFVKAGSLASSYSDQEDWLDTLDELLGQAPRHWPLSLYPG HFKVLGNRQVARSLGIDLASDADLGRRLAEGEEP" misc_feature complement(1755610..>1756095) /locus_tag="PA1612" /note="ABC-type uncharacterized transport system, periplasmic component [General function prediction only]; Region: COG2984" /db_xref="CDD:442223" gene complement(1756489..1758597) /locus_tag="PA1613" /db_xref="GeneID:881897" CDS complement(1756489..1758597) /locus_tag="PA1613" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250304.1" /db_xref="GeneID:881897" /translation="MPIASRAPVSLTLLALLFGSKLAAADLFNDPSGVPEVLTATRLK QSPAEVPGSISVLDRELIVASGARDIPELMRLVPGMMVGYLSGNQPTVNYHGTSMSGA RRLQVLIDGRSVYRPGLASVDWSDLPLALEDVERIEVFRGPNTVSYGANALMGVINII TRAPGESPGTRLKYTAGQRGIRDWYASQSIALEDSDFRLSLSGQEDDGFDHDLDGHAL RDGRRLSRFNLNASHSLAPNQSLEWQLAAKEGSNQHPYAYRSPFPQVPDDVDNSDTLA HDYAGSLRWNVDLDPRHSFYIQGYAQHWERRQEWNACEAGIAFSPQLAQLWELNPDYL RRFADDPTRLPPGSPQELQLATQVLDQLRNSGLRPVCGRVDRNIRESRYDLEMQDTLS LGDNLRLLNGLSYRYDQANSETFYGGRVSSQIWRLFSQLEWHAGEHWLLQGGGMLEDV EGSGSSFSPRLAVNYLFNPQHSLRAVYSEAVRSPGMYENDVDWRYRVRHLTPAPYGQS EAYYFASAHGPGDLGKEHTRSREIGYNGFFRETGLAMDVRLFHEEITGLISDPLSVVD FSPDNGDRIRFSGAEGQLDWRLGLRDRLRATYAYLDYDATSRYDRRLTARHGGSAGWM HDWGQGWSSALFYYGDDSLNGHRFERVDLRLAKRIPLGKAALELAGVLQQRLDDQPLT FPDNRYDSRHLLYFSAEVTF" misc_feature complement(1756684..1758573) /locus_tag="PA1613" /note="Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism]; Region: FepA; COG4771" /db_xref="CDD:443803" gene 1758748..1759770 /gene="gpsA" /locus_tag="PA1614" /db_xref="GeneID:881904" CDS 1758748..1759770 /gene="gpsA" /locus_tag="PA1614" /EC_number="1.1.1.94" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate dehydrogenase" /protein_id="NP_250305.1" /db_xref="GeneID:881904" /translation="MTEQQPIAVLGGGSFGTAIANLLAENGQAVRQWMRDPEQAEAIR TRRENPRYLKGVKVHPGVDPVTDLERTLADCQLIFVALPSSALRKVLQPHQAALTDKL LVSLTKGIEAHTFKLMSEILEEIAPQARIGVISGPNLAREIAEHELTATVVASEDDEL CARVQAALHGRTFRVYASRDRFGVELGGALKNVYAIMAGLAAAMDMGENTRSMLITRA LAEMTRFAVKLGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGHALGEGLSLEEAVSRM GETAEGVNTLKVLKEKSDEMQVYMPLVAGLHAILFEGRTLAQVIQLLMRGEPKTDVDF IPTTGF" misc_feature 1758757..1759722 /gene="gpsA" /locus_tag="PA1614" /note="NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Region: gpsA; PRK00094" /db_xref="CDD:234629" gene 1759784..1760125 /locus_tag="PA1615" /db_xref="GeneID:881975" CDS 1759784..1760125 /locus_tag="PA1615" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="lipase" /protein_id="NP_250306.1" /db_xref="GeneID:881975" /translation="MSADPQARESIAIRILWMLLFVLVWQVAELLLGAVVVIQLVYRL IYGAPNGSLMAFGDSLSQYLAQIGRFGTFHSDEKPWPFADWPTARAAEGEAAHSVPPA AHPARDEEPKL" misc_feature 1759805..1760032 /locus_tag="PA1615" /note="Domain of unknown function (DUF4389); Region: DUF4389; pfam14333" /db_xref="CDD:433875" gene 1760122..1760586 /locus_tag="PA1616" /db_xref="GeneID:881886" CDS 1760122..1760586 /locus_tag="PA1616" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250307.1" /db_xref="GeneID:881886" /translation="MKLWLLRHGEAESHASRDSERRLTAHGRKEVLQSAARLAGLPLD GILASPYVRAQQTAELVREALGLVEPVGTAPWLTPDDDPREVLGFLDERSERNLLLVS HQPLVGALGGLLVHGNRRDPLPMSTASLAELEGDFAAAGLMTLVSLYHPRHG" misc_feature 1760128..1760574 /locus_tag="PA1616" /note="Phosphohistidine phosphatase SixA [Signal transduction mechanisms]; Region: SixA; COG2062" /db_xref="CDD:441665" gene 1760713..1762380 /locus_tag="PA1617" /db_xref="GeneID:881885" CDS 1760713..1762380 /locus_tag="PA1617" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="AMP-binding protein" /protein_id="NP_250308.1" /db_xref="GeneID:881885" /translation="MVTANRLPLEVFFEREKRHPQRRYLVQPIGGGRVEELSWGEVGD QARRAAAWLRTLDLPAGSRIAIISKNCAHWIVTDLAIWMAGHVSVPLYPNLTAESARQ VLEHSESAVVFVGKLDDWPAMAPGVPEGIPTVAMPLHPEGRFDRQWSDLQACAPLEGD TPTAAEQLATLIYTSGTTGVPKGVMHNFSSFAFAASRGVELFGTREDDRMLSYLPLCH VAERMFVEMGSLYGGTTVFFAESLDTFVEDMKRARPTLLFGVPRIWTKFQMGVYSKMP AQKLDRLLKLPILGRIVGRKVLAGLGLDAVRYALCGAAPVPEALLLWYRRLGLDVLEV YGMTENSGYSHVCRPGRQKTGWIGQNSPGVEVRISDEGEVQVRSGATMVGYYKEPEKT AEVLTADGFLRTGDKGEQDADGNLRLTGRMKEIFKTSKGKYVAPAPIENRLAVHDRIE QVCVVGEGLSAPLGLCVLSEVGRREALNGTRGALESSLRAHLEQVNGALDKHERLVGL VLVQETWAVDNGFLTPTLKIKRNMVEGAYGSRFHEWVERREAVLWHE" misc_feature 1760803..1762323 /locus_tag="PA1617" /note="Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase; Region: LC_FACS_bac; cd05932" /db_xref="CDD:341255" misc_feature order(1761223..1761225,1761232..1761249,1761253..1761258) /locus_tag="PA1617" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341255" misc_feature order(1761232..1761234,1761568..1761573,1761709..1761726, 1761928..1761930,1761964..1761966,1761973..1761975, 1762009..1762011,1762291..1762293) /locus_tag="PA1617" /note="putative AMP binding site [chemical binding]; other site" /db_xref="CDD:341255" misc_feature order(1761232..1761234,1761352..1761357,1761490..1761492, 1761496..1761501,1761508..1761510,1761568..1761573, 1761709..1761726,1761928..1761930,1761964..1761966, 1761973..1761975,1762000..1762011,1762216..1762218) /locus_tag="PA1617" /note="putative active site [active]" /db_xref="CDD:341255" misc_feature order(1761352..1761354,1761496..1761501,1761508..1761510, 1761568..1761570,1762000..1762008,1762177..1762179, 1762216..1762218) /locus_tag="PA1617" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:341255" gene 1762433..1762870 /locus_tag="PA1618" /db_xref="GeneID:881899" CDS 1762433..1762870 /locus_tag="PA1618" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="esterase" /protein_id="NP_250309.1" /db_xref="GeneID:881899" /translation="MSLWRQTPDLEQLNASQKNSIGDLLGIRFEAFDDESLTASMPVD SRTHQPFGLLHGGASVVLAESLGSMASYLCVDTSQYYCVGLEVNANHLRGLRSGRVTA VARAIHLGRTTHVWDIRLSGDDGKPSCIARLTMAVVPLAGRAG" misc_feature 1762439..1762846 /locus_tag="PA1618" /note="The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated...; Region: hot_dog; cl00509" /db_xref="CDD:469797" misc_feature order(1762592..1762594,1762682..1762684,1762703..1762714) /locus_tag="PA1618" /note="CoenzymeA binding site [chemical binding]; other site" /db_xref="CDD:239527" misc_feature order(1762595..1762597,1762601..1762603,1762610..1762612, 1762685..1762699,1762703..1762705) /locus_tag="PA1618" /note="subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:239527" misc_feature order(1762598..1762600,1762622..1762627,1762634..1762639, 1762682..1762684) /locus_tag="PA1618" /note="PHB binding site [active]" /db_xref="CDD:239527" gene 1762928..1763752 /locus_tag="PA1619" /db_xref="GeneID:881976" CDS 1762928..1763752 /locus_tag="PA1619" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250310.1" /db_xref="GeneID:881976" /translation="MEQITHLSSGIPGIRLIDAEHNRFSFPRHFHLEYHIGLLLQGRH RYAAGGERRLAGAGDALLMAPESIHDGSSAGEEGYRIRVLALDADWLERASRDFSDGR RGAPRLTSSLVRDERLQQRLRQLHLGMLGGAAALENRLALEEHLWQALACLLSLGSSL RLEEGDREGFGQRDWTRLRDWLESRLEYPPNLEELAAFCGLSPWQVLRRFRRHCGLPP HQWLTQLRLERALPLVLRGEQPLSQVAQQFGFYDQAHFTRLFRRTYGLPPARLRQR" misc_feature 1762961..1763374 /locus_tag="PA1619" /note="AraC-like ligand binding domain; Region: AraC_binding; pfam02311" /db_xref="CDD:396749" misc_feature <1763456..1763749 /locus_tag="PA1619" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene 1763793..1764434 /locus_tag="PA1620" /db_xref="GeneID:881943" CDS 1763793..1764434 /locus_tag="PA1620" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250311.1" /db_xref="GeneID:881943" /translation="MQELSVLLTLAAVFAVALVSPGPDVALVVRTSLHQGRRAGLASA LGLACGILLHTTLVLTGVSLLLSRTPVLFAILQALGALYLAWLGVGALRAWLRRGDGQ PGRLDGALPPSPLGPWLRGVATNLFNPKALVFFIALLGSLIPAQMSLGGKLAVAALLF GMGACWFGLLSLTLTRPALQARLLRAVPWLDAACGVVFLLVAAAILEHLVRSA" misc_feature 1763799..1764410 /locus_tag="PA1620" /note="Threonine/homoserine/homoserine lactone efflux protein [Amino acid transport and metabolism]; Region: RhtB; COG1280" /db_xref="CDD:440891" gene 1764536..1765348 /locus_tag="PA1621" /db_xref="GeneID:881893" CDS 1764536..1765348 /locus_tag="PA1621" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_250312.1" /db_xref="GeneID:881893" /translation="MSQSVFFAHANGFPSATYAKLFEALAPEYRVDHLEMHGHDPRFP VNDNWDNLVDELLHHLASLEQPVWGVGHSLGGVLHYHAALRRPELYRGVVMLDSPVLT LADRLVIRAAKRFGFIDRITPAGRTLGRREAFPDLEEARAYFSGKALFRRFDPDCLEA YVRHGLADSGGGSGLRLRFDPATEISIYRSVPHSSPGRARQLQVPLAMVRGRHSKVVL PHHTRLIRAMPRGEFMSLPGGHMFPLERPRETAELLKGVFDRWSRATEERSA" misc_feature 1764548..1765315 /locus_tag="PA1621" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene 1765345..1766205 /locus_tag="PA1622" /db_xref="GeneID:881887" CDS 1765345..1766205 /locus_tag="PA1622" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_250313.1" /db_xref="GeneID:881887" /translation="MSLQVEEVRISLPHIELAAHLFGPPDGKPVIALHGWLDNAMSFS RLAPKLAGLRIVALDFAGHGHSAHRAEGASYLLWDYALDVLMVAEQLGWERFSLLGHS MGAIVSVLLAGALPERIERLALIDGLIPYTGEADKAPQKLGEALKAQLALRHKRKPVY AELEKAVEARMRGVGEISREAAELLAQRGLEPVPGGYTWRTDARLTLPSPLRLTQAHA LNFVRSVECPVSLVLAEQGMLAVEPRMRALLETLPFERHHLPGGHHLHLDDEAGAQAV ARVFAAFFAR" misc_feature 1765369..>1765797 /locus_tag="PA1622" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene 1766285..1766947 /locus_tag="PA1623" /db_xref="GeneID:881883" CDS 1766285..1766947 /locus_tag="PA1623" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250314.1" /db_xref="GeneID:881883" /translation="MIDLYTAATPNGHKVSIALEEMGLPYRVHALSFDKKEQKAPEFL RINPNGRIPAIVDRDNDDFAVFESGAILIYLAEKTGQLMPTDVKGRSRVIQWLMFQMG GVGPMQGQANVFFRYFPEKLQGAIDRYQHETRRLYEVLDGRLGEAEYLAGDYSIADIA TYPWVRIHDWSGVAVDGLDNLQRWIAAIEARPAVQRGLLVPRREKEGDDAIRTAQSML TR" misc_feature 1766285..1766896 /locus_tag="PA1623" /note="Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]; Region: GstA; COG0625" /db_xref="CDD:440390" gene 1766956..1767762 /locus_tag="PA1624" /db_xref="GeneID:881888" CDS 1766956..1767762 /locus_tag="PA1624" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250315.1" /db_xref="GeneID:881888" /translation="MRGFLLLSLGVFSFSALAADLPGSHDLDILPRFPRAEIVDFRQA PSEERIYPLGAISRISGRLRMEGEVRAEGELTALTYRLPPEHSSQEAFAAARTALLKA DATPLFWCERRDCGSSSLLANAVFGNAKLYGPDEQQAYLLVRLAAPQENSLVAVYSIT RGNRRAYLQAEELKADAPLAELLPSPATLLRLLKANGELTLSHVPAEPAGSWLELLVR TLRLDTGVRVELSGKHAQEWRDALRGQGVLNSRMELGQSEVEGLHLNWLR" misc_feature 1767013..1767558 /locus_tag="PA1624" /note="Domain of unknown function (DUF4892); Region: DUF4892; pfam16234" /db_xref="CDD:435232" gene 1767928..1768995 /locus_tag="PA1625" /db_xref="GeneID:878498" CDS 1767928..1768995 /locus_tag="PA1625" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250316.1" /db_xref="GeneID:878498" /translation="MFDNDRLLLRVLLFGLLGASLWVLAPFWSALFWAAVLAFASWPL MRMLTRLLGGRESLAAGLLTLGWIVLVALPLIWLGFGLADNVRSLMELLKNLQVEGLP PPPSWMAGVPLIGDRLIGWWDSIDQQGVAFFYVLKPYVGEVGNWLLARSAKIGGGILE LVLSLILIFFFYRDGPRLESIVHRALERLIGNRAEHYRDLVAGTVQRVVNGVIGTAAA QALLAWIGFMIAGVPGAMLLGLLTFACSLLMVPPLVWGPATAWLFFKGDYGHGVFLGL WGFFIISGVDNILKPYLISRGGNLPLVVVLLGVFGGLLAFGFMGLFLGPILLAVAYNL LSDWIASTPRTPPGEGRGPDA" misc_feature 1767982..1768956 /locus_tag="PA1625" /note="AI-2E family transporter; Region: AI-2E_transport; cl00465" /db_xref="CDD:444921" gene complement(1769047..1770321) /locus_tag="PA1626" /db_xref="GeneID:879305" CDS complement(1769047..1770321) /locus_tag="PA1626" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_250317.1" /db_xref="GeneID:879305" /translation="MTHALNARPGAHPGHPPEELLIDAEVDDEPVPPAPPLRPWLLLL GLVLVALNLRPALSSLAPLLNQVRDDTGLSAAAAGLLTTAPVLCLGLFAPLAPRLARR IGAERSVLLILFCLAGGIVLRSLFPVFGLFAGSVLAGASIGIIGVLLPGIVKRDFPRQ AGVMTGVYTMALCLGAALAAGATAPLEKLFGNWELALAFWSLPAILAAAFWLPQTRQG QHAHRQAFRVIGLWRDPLAWQVTLYMGLQSSLAYIVFGWLPSILIDRGMTAVEAGLVL SGSVMLQLITALLAPWLAARARDQRLAVVLVMATTLAGLLGFLYAPLQTIWGWAVLLG LGQGGTFSIALALIVLRSRDAHVASHLSGMAQGVGYTLAAMGPFMVGVVHDLTGGWNA VGYIFIGVAIAATLFGLGAGRSQYVGARSEHL" misc_feature complement(1769083..1770162) /locus_tag="PA1626" /note="2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters; Region: MFS_NIMT_CynX_like; cd17339" /db_xref="CDD:340897" misc_feature complement(order(1769203..1769205,1769212..1769217, 1769224..1769229,1769236..1769238,1769287..1769289, 1769299..1769301,1769311..1769316,1769461..1769463, 1769473..1769475,1769554..1769556,1769563..1769571, 1769578..1769583,1769590..1769592,1769794..1769796, 1769803..1769808,1769815..1769817,1769872..1769874, 1769881..1769889,1769893..1769898,1770043..1770045, 1770139..1770141,1770148..1770153,1770160..1770162)) /locus_tag="PA1626" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340897" gene complement(1770337..1770984) /locus_tag="PA1627" /db_xref="GeneID:883125" CDS complement(1770337..1770984) /locus_tag="PA1627" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250318.1" /db_xref="GeneID:883125" /translation="MTIPLKRSLVDIALEQIRQRIDAGHWPLGQRLPPEPELAELLGM SRNTVREAVRVLTFSGVLEVRQGDGTYVRACADPLETMLVLARSAVQHSLEARGMIEI EAARLAAVRRDDSDLSALREHLDASRQRYGSADLQDYIEHDVRFHQRMVDAAHNPVLS ELYRYFSQVIRTSLERTMADPQRAQPCFELHQQLLDAIERGDPDAAAAANRALLI" misc_feature complement(1770373..1770969) /locus_tag="PA1627" /note="DNA-binding transcriptional regulator, FadR family [Transcription]; Region: FadR; COG2186" /db_xref="CDD:441789" gene complement(1771122..1772651) /locus_tag="PA1628" /db_xref="GeneID:883106" CDS complement(1771122..1772651) /locus_tag="PA1628" /EC_number="1.1.1.157" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="3-hydroxyacyl-CoA dehydrogenase" /protein_id="NP_250319.1" /db_xref="GeneID:883106" /translation="MPDIRCIAVVGTGAMGTGIAQIAAQAGLTVWLFDSRAEAAAEAR QRLRQTFESLCGKGKLSAADAEAAQNRLRVAERLEQLGDCELVVEAIVERLEAKQELL RRLEAIVAPESILASNTSSLSITAIAAACERPQRVAGFHFFNPVPLMRVVEVVDGLAS APEVGDALLALAARLGHRGVRTKDSPGFIVNHAGRAYGTEALRILGEGVAECAEIDRV LRECAGFRMGPFELLDLTGLDVSHPVMESIYQQYYQEPRYRPHPLTRQLLAAGRLGRK SGQGFYRYVDGQPQDKPGPQPVPQAAARPPVWLGCENEDDRRTLAELLHRLGVEPETG ERPSAAALCLLAAWGEDLSSAVQRFACPAERSVGIDLLCDLERRRCLMLSPLTAPAMR DAAHALLAGDGVGVTVLRDSPGFVVQRVLAMIVNLACDIAQQGIASVEDIDQAVHLGL GYPHGPLEWGDRLGPRRLLSILQRLQALTGDPRYRPSPWLRRRAQLGMSLRAGETAAV D" misc_feature complement(1771137..1772651) /locus_tag="PA1628" /note="3-hydroxy-acyl-CoA dehydrogenase; Validated; Region: PRK08268" /db_xref="CDD:236211" gene complement(1772655..1773440) /locus_tag="PA1629" /db_xref="GeneID:879291" CDS complement(1772655..1773440) /locus_tag="PA1629" /EC_number="4.2.1.17" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="NP_250320.1" /db_xref="GeneID:879291" /translation="MSADPSPVVLLEFPAADIALLRLNRPQARNALNDEVRQRLASHF QTLGADPAIRVIVLTGDSRCFAAGADLRDLSTSTAIGLYGRHGERYWEAIARCPKPVI AAVNGFALGGGCELAMHCDLIVAGESAQFAQPEIKVGVMPGAGGTQRLVRAVGKFQAL RMLFTGCLVKAPQALAMGLVSEVVADESTLARALELAMEIARLPPLALAQIKEVVLAG ADLPLDSALALERKAFQLLFDSQDQKEGMHAFLEKRPPNYQGK" misc_feature complement(1772658..1773440) /locus_tag="PA1629" /note="enoyl-CoA hydratase; Provisional; Region: PRK08138" /db_xref="CDD:236162" misc_feature complement(order(1773027..1773029,1773036..1773041, 1773105..1773113,1773117..1773119,1773228..1773242, 1773252..1773254,1773348..1773350,1773354..1773356)) /locus_tag="PA1629" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(1773105..1773107,1773234..1773236)) /locus_tag="PA1629" /note="oxyanion hole (OAH) forming residues [active]" /db_xref="CDD:119339" misc_feature complement(order(1772841..1772846,1772853..1772855, 1772898..1772900,1772907..1772909,1772940..1772942, 1772949..1772954,1772958..1772963,1772967..1772972, 1772985..1772990,1772994..1773002,1773006..1773008, 1773024..1773035,1773069..1773080,1773141..1773143, 1773165..1773167)) /locus_tag="PA1629" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene 1773682..1774548 /locus_tag="PA1630" /db_xref="GeneID:879279" CDS 1773682..1774548 /locus_tag="PA1630" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250321.1" /db_xref="GeneID:879279" /translation="MRGNDERRSPAEGASTEAEVSAFEAVLIDPMQEKDEELKDRQFV TALARGLELLRCFTPRESLLGNQELAKKTGLPKPTVSRLTHTLTRLGYLRHLPHSGKY QLEVGVMSFGYAMLSNLSIRALARPLMEEMAGYAKAAVAMAARDRLSMVYLDVVHGEA NLTMRRQVGSHLSLHRSAIGRACLAAMPEDEREFILGHIRKRHPEDWPEVRKGLERAF RDYADYGFCLSLGEWQRDVNAVGVALHHESHGLLAFNCGGPSFHLKREKLEDDIGPRL LHMVHNIEAATR" misc_feature 1773799..1774539 /locus_tag="PA1630" /note="DNA-binding transcriptional regulator, IclR family [Transcription]; Region: IclR; COG1414" /db_xref="CDD:441024" gene 1774603..1775757 /locus_tag="PA1631" /db_xref="GeneID:883087" CDS 1774603..1775757 /locus_tag="PA1631" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_250322.1" /db_xref="GeneID:883087" /translation="MIRDPETLNLLLDSIRQFVRESLVPHEQEVAETDRIPEAIIARM REMGLFGLSIPEAYGGLGVTMEEEVSIAFELGRTSPAFRSLLGTNNGIGSQGIVIDGT EEQKRRYLPRLASGELLSSFCLTEPDSGSDAASLKTTAVRDGEHYVLNGTKRFITNAP QAGIYTVMARTDPAIRGAGGISAFVVERGTPGLSLGKPDRKMGQKGAHTCDVIFDDCR VPASQLIGGVEGVGFKTAMKVLDKGRLHIAAVCVGVAERMLEDALRYALERKQFGQPI AEFQLIQAMLADSKAEAYAARCMVIDAARQRDEGRDVGTEASCAKLFASEMCGRVADR AVQIFGGAGYIGDYGIERFYRDVRLFRIYEGTTQIQQLLIARNMIRAAQG" misc_feature 1774615..1775748 /locus_tag="PA1631" /note="Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]; Region: CaiA; COG1960" /db_xref="CDD:441563" gene 1775849..1776034 /gene="kdpF" /locus_tag="PA1632" /db_xref="GeneID:883027" CDS 1775849..1776034 /gene="kdpF" /locus_tag="PA1632" /EC_number="3.6.3.12" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="potassium-transporting ATPase subunit F" /protein_id="NP_250323.2" /db_xref="GeneID:883027" /translation="MPSDAALNRFFTPPLRRLSLKRQRPLEGEIAHMTVLDWLSLALA TGLFVYLLVALLRADRA" misc_feature 1775945..1776031 /gene="kdpF" /locus_tag="PA1632" /note="K(+)-transporting ATPase subunit F; Region: kdbF; PRK14740" /db_xref="CDD:173201" gene 1776045..1777739 /gene="kdpA" /locus_tag="PA1633" /db_xref="GeneID:883055" CDS 1776045..1777739 /gene="kdpA" /locus_tag="PA1633" /EC_number="3.6.3.12" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="potassium-transporting ATPase subunit A" /protein_id="NP_250324.1" /db_xref="GeneID:883055" /translation="MNSHEILLILAFFALVLVPAPFLGRYCFKVMEGQRNLLSAPLAP LERVCYRLFGVDPASEQDWKTYTLALLAFNLAGLVLLFSILMLQGSLPLNPQHLPGLE WTLAFNTAVSFVTNTNWQAYSGEASLSYFSQMVGLTVQNFVSAAVGLCVLVALARGIS RRSTRQLGNFWVDLTRGTLYVLLPLCLLLALLLVWQGVPQTFFDYVHATTLQGAEQTI PLGPAASQIAIKQLGTNGGGFFGVNSTHPFENPSAWSNLFEVASIILIPAALVFTFGH YVKDLRQSRAILGCMLLLFCLGLGLSLWAEYQPNPALAQLPIEQGAPMEGKESRFGTA ASMLWAITTTAASNGSVNAMHDSLSPLGGMLPLLNMMLGEVIFGGVGAGLYGMLLFVL IAVFLAGLMVGRTPEYLGKKLEAKEVRLLVFTLLVMPVGVLVLGAIAASLPGPASAVT NPGPHGFSQLLYAYTSGSANNGSAFAGFGANTPFHNLMIGLAMLIGRFGYILPILAIA GSLAAKKASPVGPNSFPTHGPLFVSLLTVTILLVGGLTFLPTLALGPIAEQLSLGF" misc_feature 1776045..1777730 /gene="kdpA" /locus_tag="PA1633" /note="K+-transporting ATPase, KdpA subunit [Inorganic ion transport and metabolism]; Region: KdpA; COG2060" /db_xref="CDD:441663" gene 1777751..1779823 /gene="kdpB" /locus_tag="PA1634" /db_xref="GeneID:883011" CDS 1777751..1779823 /gene="kdpB" /locus_tag="PA1634" /EC_number="3.6.3.12" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="potassium-transporting ATPase subunit B" /protein_id="NP_250325.1" /db_xref="GeneID:883011" /translation="MNAQTQASKNALHKSLERRHNASTSLAALWRPALLQAFVKLDPR QLLRSPVMLVVELTAVLTTLLCFVPDQAVPTSVALQIALWLWFTVLFANFAEALAEGR GKARADSLKAGSQGLSANKRRADGSFESVVASSLRKGDVVRVQAGEMIPGDGEVIEGV AAVNEAAITGESAPVIRESGGDRSAVTGNTQVVSDWLLVRIGANPGESTLDRMIALVE GAKRQKTPNEVALDILLIGLTLIFLLVVVTLKPFALFAGGNLPLVFLVALLVTLIPTT IGGLLSAIGIAGMDRLVRLNVIAKSGRAVEAAGDVHVLLLDKTGTITFGNRRCSALYA APGVSGKELAEGALLASLADDTPEGKSIVEYLRILHPIEEPRREELTPIAFSAETRLS GVDWNGQVYRKGAVDAALRFIDLPREKMPEVLSREVDKIAQSGGTPLLVVANGRLLGA IHLKDVVKPGIRERFAELRRLGIRTVMVTGDNPLTAAAIAAEAGVDDVIAEATPEKKL ARIRQEQGEGRLVAMCGDGANDAPALAQADVGMAMNDGTQAAREAANLVDLDSDPTKL LDVVQVGKELLVTRGALTTFSIANDVAKYFAILPALFVGIYPQLDVLNVMRLQSPQSA ILSAIVFNALIIVALIPLALRGVRVQAADASQLLQRNLLIYGVGGLVAPFLGIKAIDL LLTAVGLA" misc_feature 1777799..1779820 /gene="kdpB" /locus_tag="PA1634" /note="K+ transport ATPase, ATPase subunit KdpB [Inorganic ion transport and metabolism]; Region: KdpB; COG2216" /db_xref="CDD:441818" gene 1779877..1780428 /gene="kdpC" /locus_tag="PA1635" /db_xref="GeneID:883003" CDS 1779877..1780428 /gene="kdpC" /locus_tag="PA1635" /EC_number="3.6.3.12" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="potassium-transporting ATPase subunit C" /protein_id="NP_250326.1" /db_xref="GeneID:883003" /translation="MFKQLRPALASLLVLSLVTGVAYPLLVTGIAQLAFPEQANGSLL RDAEGKVLGSRLIAQKFDGEEWFHSRPSAGDYATVSSAASNLAPSNPALAERIARDAA QERIADQGPVPLALVTTSGSGLDPQLPPQAARYQALRVATARGLPLRLVEDLVESHTE RPLVGPAVVNVLALNMALAGLKR" misc_feature 1779877..1780425 /gene="kdpC" /locus_tag="PA1635" /note="potassium-transporting ATPase subunit KdpC; Region: PRK00315" /db_xref="CDD:234724" gene 1780536..1783193 /gene="kdpD" /locus_tag="PA1636" /db_xref="GeneID:883029" CDS 1780536..1783193 /gene="kdpD" /locus_tag="PA1636" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="two-component sensor KdpD" /protein_id="NP_250327.1" /db_xref="GeneID:883029" /translation="MTDTARADALLADLPADGRGRLKVFLGAAPGVGKTFAMLQAAQA QLRQGVKLRAGVVETHSRAETESLLAGVPQQPLRSLEYRGMKLQEMDLDGLLADPPAL ALVDELAHSNVPGSRHAKRWQDIQELLAAGIDVYTTVNVQHLESLNDQVRDITGVQVR ETVPDWVLQEAYEIVLIDLPPRELLERLREGKVYVPEQARAAIDAFFSQTNLTALREL AMQTAAARVDADLNHRYRQRGEEAPALRGRLLVGIDGDEQAERLVRHACRVAERRHLP WSVVHVDTGGLRGEQARMRLQGAQQLAERLGGEIVVLRAGEVARTLLQHARERRASLV LVGQSRRRWYRRAFGGGLAGRLLRDGQGLEISALDSEADLRPAEPRPRYPVVWNDYLL ALLATALASGLAWIVAHLLELPNISLVFLMAVLLVAVRSSLMPALLCAVASFLAYDFL FIPPHFSFAIHRHEDLLSLAFFLFMAGLTGNLAARQRRQLEALRDTQEETSLLLELSR KLTAATDRQAVLAAAAQQFDDWKDVEVCLLGQVNGEWKTEAGVQRQLADQERVAADWA WAHDQPAGLGTGTLPGGRWWWWPLSAEEGPLALLGVAPLDGQPLSPQRRRLLAALGQP LAQALARARLAEDLEAARLHGETEQLRSALLASVSHDLRTPLTAMRGSIDSLLALGEA IPPADRRELLESTRDEAERLDRYIQNLLDMTRLGHGGLKLARDWVAPGDIVGSALNRL RAVLAPYRVQAIVANDLPLLYVHAALIEQALINVLENAARFSPNHGRLRIEVSQDAAE LRFAVSDEGPGIPEAEREKIFDMFYTAARGDRGGQGTGLGLAICQGMIGAHGGRISVG EGLDGRGTTLVLHLPLHPQPDLGQLEGDE" misc_feature 1780557..1783190 /gene="kdpD" /locus_tag="PA1636" /note="sensor protein KdpD; Provisional; Region: PRK10490" /db_xref="CDD:236701" gene 1783294..1783986 /gene="kdpE" /locus_tag="PA1637" /db_xref="GeneID:883014" CDS 1783294..1783986 /gene="kdpE" /locus_tag="PA1637" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="two-component response regulator KdpE" /protein_id="NP_250328.1" /db_xref="GeneID:883014" /translation="MTQLQNSILLIDDEPQIRKFLRISLNAQGYRVLEAGTGEEGLAQ AALNRPDLVVLDLGLPDRDGQDILRDLREWSQVPVLVLSVRASEGEKVLALDGGANDY VTKPFGIQEFLARVRVLLRQAAQGESPEASVAVGPLQVDFAYRRVTLEGAEVALTRKE YAVLAALARHLGRVVTQQQLLKDIWGPTHVEDTHYLRVVVGHLRQKLGDDPASPRFLV TEAGVGYRLRDS" misc_feature 1783306..1783971 /gene="kdpE" /locus_tag="PA1637" /note="DNA-binding transcriptional activator KdpE; Provisional; Region: PRK10529" /db_xref="CDD:182522" gene 1784108..1785016 /locus_tag="PA1638" /db_xref="GeneID:883013" CDS 1784108..1785016 /locus_tag="PA1638" /EC_number="3.5.1.2" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="glutaminase" /protein_id="NP_250329.1" /db_xref="GeneID:883013" /translation="MQQLLNEILDEVRPLIGRGKVADYIPALAGVEPNQLGIAVYSRD GELFHAGDALRPFSIQSISKVFSLVQAIQHSGEDIWQRLGHEPSGQPFNSLVQLEFER GKPRNPFINAGALVICDINQSRFAAPAQSMRDFVRRLCGNPEVVSDSVVARSEYQHRS RNAAAAYLMKSFGNFHNDVEAVLFSYFHHCALRMSCVDLARAFCFLADKGFCKHSGEQ VLNERQTKQVNAIMATSGLYDEAGNFAYRVGLPGKSGVGGGIIAVVPGRFTVCVWSPE LNAAGNSLAGIAALEKLSERIGWSIF" misc_feature 1784108..1785013 /locus_tag="PA1638" /note="glutaminase; Provisional; Region: PRK00971" /db_xref="CDD:234880" gene 1785127..1785732 /locus_tag="PA1639" /db_xref="GeneID:882995" CDS 1785127..1785732 /locus_tag="PA1639" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250330.1" /db_xref="GeneID:882995" /translation="MSRPIPVSRVFACLTVLAACAHAGAAEPDWRGYTSEQQQRSVLA VEQDAEAINKRYYDSAFEEFLPELEQLELSLAQPVVAVDEKGLLGDWKCRSTQADQYG IYRYPNFQCRIRRTDRGLFLEKTSGSQRVSGYLFREGTQRYVFLGGATVNDEPQVAFS GLAHGAPAESDVVALLRPHAGGFLLLFPERRGGYEVLEFSR" misc_feature <1785346..1785720 /locus_tag="PA1639" /note="Domain of unknown function (DUF4893); Region: DUF4893; pfam16233" /db_xref="CDD:406607" gene complement(1785736..1786773) /locus_tag="PA1640" /db_xref="GeneID:878644" CDS complement(1785736..1786773) /locus_tag="PA1640" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250331.1" /db_xref="GeneID:878644" /translation="MSKQVALVLGSGGARGYAHIGVIEELEARGYEITCIAGCSMGSV IGGIYAAGKLREYREWVESLDYLDVLRLLDVSFRLGAIRGERVFGKIHEILGEVNIED LSIPYTAVATDLTNQQEIWFQEGCLHQAMRASAAIPSLFTPVMQGSRMLVDGGLLNPL PIVPVVSAHSDLIIAVNLNATNQKQYHLPVIERPAALKGRFDSMIESLGHKLSFFRRH GDDNTPPELSADALLHPVPAESEEPAEPQLQQPAAAPQGKDSPKSASGTTVVESSGPA SLLELVNQSFEVMQTSLAQYKIAGYPPDILINVPKRVCRFFEFYKAPELIALGRQIAS DTLDRYEEDNA" misc_feature complement(1786240..1786761) /locus_tag="PA1640" /note="Patatins and Phospholipases; Region: Patatin_and_cPLA2; cl11396" /db_xref="CDD:416256" misc_feature complement(order(1786315..1786317,1786654..1786656, 1786729..1786731,1786735..1786740)) /locus_tag="PA1640" /note="active site" /db_xref="CDD:132836" misc_feature complement(1786648..1786662) /locus_tag="PA1640" /note="nucleophile elbow; other site" /db_xref="CDD:132836" gene 1786888..1787166 /locus_tag="PA1641" /db_xref="GeneID:882111" CDS 1786888..1787166 /locus_tag="PA1641" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250332.1" /db_xref="GeneID:882111" /translation="MKTWIVLPVLALTLAGCAGKTAYRENCADQLDAAWKELDLAKAE GFAGTVSYSKALTLLTGAKTQQQFEAYEGCTSKAEKARFYIRESRAGR" gene 1787250..1788284 /gene="selD" /locus_tag="PA1642" /db_xref="GeneID:877775" CDS 1787250..1788284 /gene="selD" /locus_tag="PA1642" /EC_number="2.7.9.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="selenide, water dikinase" /protein_id="NP_250333.1" /db_xref="GeneID:877775" /translation="MSEAIRLTQYSHGAGCGCKISPKVLEVILAGSGAQNLDPKLWVG NASRDDAAVYALDEERGVVSTTDFFMPIVDDPFDFGRIAATNAISDIYAMGGDPLMAI AILGWPVNVLAAEVAREVIAGGRKVCEEAGIPLAGGHSIDAPEPIFGLAVTGVVEKRF MKRNDTAEAGCRLYLTKPLGIGILTTAEKKARLRAEDVGVARDWMCTLNRPGARFGRL AGVKAMTDVTGFGLLGHLVEMADGSKLTARVEYAAVPRLASAEYYLEQGCVPGGTLRN FDSYGERIAPLPEVQKLLLCDPQTSGGLLVAVAPEGEAEFLAVAAELGLQLAPIGELV ERQSLAVQVL" misc_feature 1787250..1788278 /gene="selD" /locus_tag="PA1642" /note="selenide, water dikinase SelD; Region: PRK00943" /db_xref="CDD:234870" gene 1788284..1789393 /locus_tag="PA1643" /db_xref="GeneID:878548" CDS 1788284..1789393 /locus_tag="PA1643" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="tRNA 2-selenouridine synthase" /protein_id="NP_250334.1" /db_xref="GeneID:878548" /translation="MRDNTQHYRELFLDDIPLMDVRAPVEYHKGAFPNTVNRPLMNDI ERQKVGTSYKQHGQQAAIALGHELVCGALKAERLAAWKAFAEANPNGYLYCFRGGLRS QIVQQWLKQDAGIDYPRVIGGYKALRNFLFETTRAAVDECDFVLVGGLTGCGKTEVIA ALDNSLDLEGHANHRGSSFGRRATPQPAQIDFENRLAIDILKKRHRGVGQFVLEDEGR IVGSCSLPLELYQGMQGYPLVWLEDAFEQRVERILRDYVIDLRSEFERVVGVEEGFAA FSAYLQKSLAGIVKRLGGERYQRLAAILVQALEEQGRDGSVDTHRGWIEGLLKEYYDP MYAFQRQSKEDRVEFRGNQAEVIGYLRQRQALRPS" misc_feature 1788284..1789372 /locus_tag="PA1643" /note="tRNA 2-selenouridine synthase; Provisional; Region: PRK11784" /db_xref="CDD:236982" gene complement(1789372..1789719) /locus_tag="PA1643a" /db_xref="GeneID:17373354" CDS complement(1789372..1789719) /locus_tag="PA1643a" /codon_start=1 /transl_table=11 /product="aldehyde-activating protein" /protein_id="YP_008719746.1" /db_xref="GeneID:17373354" /translation="MNYRGSCHCGTIAYEVEGDLDQVIQCNCSLCSRRGWLLWFVPRD RLALKTPASAMHTYTFNTHRLQHHFCPTCGCAPFSEGIGPDGQAMAAVNARCLEDIDA NALPVQHYDGRNA" misc_feature complement(<1789414..1789719) /locus_tag="PA1643a" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3791" /db_xref="CDD:443005" gene 1789857..1790465 /locus_tag="PA1644" /db_xref="GeneID:878453" CDS 1789857..1790465 /locus_tag="PA1644" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250335.1" /db_xref="GeneID:878453" /translation="MQLDFTTIAPAEAYRWLASTVTPRPIAWVSTLSAEGASNLAPFS FFQVISDEPPTLMVNVSLRDDGSLKDTLRNVQATGQLVIHLVGAAQAETMNATSAWLP HGVSEIETVGIPTVSSVRVAPPRIAAAAVAFECEVAEIKPYPAENPNCHLIFARVLLA HVDDAVLADERHVDSARLDLVGRLGGSHYSHTRDTFSMIRPR" misc_feature 1789884..1790354 /locus_tag="PA1644" /note="FMN reductase RutF, DIM6/NTAB family [Energy production and conversion]; Region: RutF; COG1853" /db_xref="CDD:441458" gene complement(1790472..1790879) /locus_tag="PA1645" /db_xref="GeneID:878657" CDS complement(1790472..1790879) /locus_tag="PA1645" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250336.1" /db_xref="GeneID:878657" /translation="MRPVLPLLLSLSLCAPALADWSGPIEQPLWSLPAAPGLSRWLIV HNLSSAAADGLYHVEVLERRQGQQPWQFQRLAAHLALTEQALRASIVAPLKRGGVYPE SYQFAYRQWQERQAAGQAPVCRRTVDECLRAPD" misc_feature complement(1790478..1790822) /locus_tag="PA1645" /note="Domain of unknown function (DUF5086); Region: DUF5086; pfam16985" /db_xref="CDD:435693" protein_bind 1790969..1790981 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1791080..1793038 /locus_tag="PA1646" /db_xref="GeneID:877903" CDS 1791080..1793038 /locus_tag="PA1646" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_250337.1" /db_xref="GeneID:877903" /translation="MLGLLRRRLADLGTAKKLAIGFTLVLLLTALVAALAVLSLHALG QRFARLQEMSAINRDVLEVRQAEKDFALHGEKSDAERLRQRLAATLERVGRLKADGDA DQALGMAEVEQVLAAYLEAFGRFEQSIQGRQLAWESASWSLNGAANSLDILQSSLAED GAYALKESQGHDGEPLLQQAAQVAQVNRLVLQGLDEARSRLEARAADAQEGPPKSLRE ALELAARLEQAITDDAYVSVVKDVLTNIRGFADKLAEYRASQLQERQMYAAMGERAGQ VMARVDRSWEAQQQAMLHSLRTNSLLIVGAAVLALLVGLGAAFGISLLIVRPLRQAMG VAQRIAEGDLAVRVDSERRDEVGQLMAAMRAMTGSLRGIVSQLQDGVGRIAGASEALS GVTTRTRLGIDSQRAETEQVATAMNQMAATVHEVAHNAEEAAGAAESADGKVSVGQEV VRQTLERIERLAEAVRAATASVEALSADSQRIGSVLDVIKSVAEQTNLLALNAAIEAA RAGDQGRGFAVVADEVRALARRTQQSTAEIETLIGALQNGTQQAVQRMQRSHQLVDQS VDDALQTEAALGNIATAVALIQQMNQQIAAASEQQSAVAEEINRSVTAIREVADQSAQ AMQSTASSSEQLAELGRELQGMVRHFRL" misc_feature 1791458..1793035 /locus_tag="PA1646" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene complement(1793019..1794740) /locus_tag="PA1647" /db_xref="GeneID:879622" CDS complement(1793019..1794740) /locus_tag="PA1647" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sulfate transporter" /protein_id="NP_250338.1" /db_xref="GeneID:879622" /translation="MPLARWVPGLDSLLHYRRAWFRPDVQAGLSVAAIQIPTAIAYAQ IAGFPPQVGLYACILPMLIYALIGSSRQLMVGPDAATAAMVAAAITPLAAGDPQRLVD LSMIIAIMVGLFSIVAGLARAGFIASFLSRPILVGYLNGIGLSLLVGQLGKLFGYEAA TSGFVAGILALLENLLHIHWPTLILGSLSLLLMVLLPRRFPQLPGALCGVLLASLAAA LLGLDRYGVELLGEVPAGLPQLSWPQTSLEELKSLLRDATGITVVSFCSAMLTARSFA ARHGYSINANHEFVALGLANIGAGVSQGFAISGADSRTAVNDMVGGKTQLVGVVAALV IAATLLLLNKPLGWVPMPALGAVLLLAGWGLIDVQALKGFWKLSRFEFSLCLLTTVGV LSVGVLPGIFVAVSIAVLRLLYYTYRPSDAVLGWMHGIDGQVELAKYPQATTLPGLVI YRFDAPLLFFNADYFKQRVLAVVDGSERPNAVLLNAEAMTNLDISGLATLHEVQQILK AQGVHLSLARVTGQTLDLLQRSSMLGEIKPPLVFSSVRSGVSAYRYWLRQQERLAAQA AATSGNA" misc_feature complement(1793082..1794698) /locus_tag="PA1647" /note="Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism]; Region: SUL1; COG0659" /db_xref="CDD:440424" protein_bind complement(1794599..1794611) /locus_tag="PA1647" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(1794883..1795887) /locus_tag="PA1648" /db_xref="GeneID:882158" CDS complement(1794883..1795887) /locus_tag="PA1648" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_250339.1" /db_xref="GeneID:882158" /translation="MTSQINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNE YLSLDPAMRGWMNDARSYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGALGVQD YFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAV GSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGID VFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGM VVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV " misc_feature complement(1794886..1795884) /locus_tag="PA1648" /note="NADPH-dependent curcumin reductase CurA [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]; Region: CurA; COG2130" /db_xref="CDD:441733" gene 1796138..1796899 /locus_tag="PA1649" /db_xref="GeneID:878266" CDS 1796138..1796899 /locus_tag="PA1649" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_250340.1" /db_xref="GeneID:878266" /translation="MSKLLSGQVALVTGGAAGIGRATALAFAAAGVKVVVADLDSAGG EGTVEAIRQAGGEALFIRCDVTRDAEVKALVEGCAAAYGRLDYAFNNAGIEIEQGKLA DGNEAEFDAIMAVNVKGVWLCMKHQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAAS KHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPLGRV GRVEEIAAAVLYLCCDNAGFTTGIALPVDGGATAI" misc_feature 1796138..1796896 /locus_tag="PA1649" /note="SDR family oxidoreductase; Region: PRK06172" /db_xref="CDD:180440" misc_feature order(1796177..1796179,1796183..1796194,1796249..1796257, 1796324..1796332,1796408..1796416,1796480..1796482, 1796561..1796569,1796606..1796608,1796618..1796620, 1796696..1796707,1796711..1796716) /locus_tag="PA1649" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:212491" misc_feature order(1796483..1796485,1796567..1796569,1796606..1796608, 1796618..1796620) /locus_tag="PA1649" /note="active site" /db_xref="CDD:212491" gene 1797058..1797951 /locus_tag="PA1650" /db_xref="GeneID:879683" CDS 1797058..1797951 /locus_tag="PA1650" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_250341.1" /db_xref="GeneID:879683" /translation="MTADPILTLFLPIALGIIMLGLGLSLTPADFLRVVRYPKPVLVG LVCQIVLLPLACFLIVQGFALEAALAVGMMLLAASPGGTTANLYSHLAHGDVALNITL TAVNSVIAILTMPLIVNLSLQYFMGDGQAIPLQFGKVVQVFVIVLGPVAIGMLVRNRL PAVADRLQKPVKILSALLLLVIILLALAKDWQTFVTYAPVVGLAALAFNLLSLAVGYW VPRLLRLPKAQAVAIGMEIGIHNGTLAIALALSPSLLNNSTMAIPPAIYGVLMFFTAA AFGWWVSRGHQATPAPVTAPD" misc_feature 1797073..1797909 /locus_tag="PA1650" /note="Predicted Na+-dependent transporter YfeH [General function prediction only]; Region: YfeH; COG0385" /db_xref="CDD:440154" gene complement(1797958..1799154) /locus_tag="PA1651" /db_xref="GeneID:878166" CDS complement(1797958..1799154) /locus_tag="PA1651" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_250342.1" /db_xref="GeneID:878166" /translation="MTETTQPQPRLRPFADSSPAAVVAGFVAMLTGYTSSLVLMFQAG QNAGLSSAQISSWIWALSIGMGLATIGLTLRYRVPIVIAWSTPGAALLISSLPGVPYS EAIGAFIVCALLITLCGVTGSFERLMRQVPSSLASALLAGVLFRIGIEICNAAEQQTL LVLAMFFSYLLCKRFSPRYAVFAALLVGVLLAGILGQLDFSRFRLELAVPEWTTPSFS LAATISIGIPLFIVAMASQNMPGIAVLRADGYQVPASPLISSTGIASILLAPFGSHGI NLAAISAAICTGPSAHEDPHKRYTAALWCGFFNCVAGTFGATLAALFAAFPKALVLSI AAIALLGSIMNGLANSMADERQREAALVTFMVTASGFTLLSIGSAFWGLVAGLLTQFV LNWRRG" misc_feature complement(1797964..1799127) /locus_tag="PA1651" /note="Predicted benzoate:H+ symporter BenE [Secondary metabolites biosynthesis, transport and catabolism]; Region: BenE; COG3135" /db_xref="CDD:442369" gene 1799385..1800020 /locus_tag="PA1652" /db_xref="GeneID:877950" CDS 1799385..1800020 /locus_tag="PA1652" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250343.1" /db_xref="GeneID:877950" /translation="MDANPYATPRVELVEQGIPDAFRRRWTPAQLRILAWLCLASIAG GVVLMVLSLLEVFGDGAAFRVYADWLGLLLSLLGAYLLLRLKHLVESRFRGPSLAWPV WLSILLTLLGEGWSLLAVTDDALQGWNWQALVYFALLALIGATTLWLGLRLLKQENLY PSLRIMAWLDIAGGAMLASVLLLVLAVLPLLAATVAMALACWRAARELERS" gene complement(1800071..1800547) /locus_tag="PA1653" /db_xref="GeneID:880610" CDS complement(1800071..1800547) /locus_tag="PA1653" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250344.1" /db_xref="GeneID:880610" /translation="MPDLKNHAVQQQAMMEAFFFAYQAFTTKPDEMLARRGLGRVHHR VLFFIARYPGLSVKELLALLGVTKQALNIPLRQLLEMNLIGSATADDDKRKRLLGLTA EGVRLEKALRREQSRLLQRCFEEAGGEAVSGWLAVNRTLARAHAGSRGEAATEAAD" misc_feature complement(1800173..1800535) /locus_tag="PA1653" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" gene 1800629..1801795 /locus_tag="PA1654" /db_xref="GeneID:881937" CDS 1800629..1801795 /locus_tag="PA1654" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_250345.1" /db_xref="GeneID:881937" /translation="MPFSERISRLKSSLIREILAAAQRPEVMSFAGGLPAEPMLPKVQ WEQMPASMGQYGMSEGEPALREAIAAEARALGVPCEASQVLIVSGSQQTLDLASKLFI DPGTEVLLEAPTYLAALQAFQLFGADCVTVPLGAEGPDLVALRQRLERHKPAFAYLIP TFQNPSGVRYSEERRDAVAALLDEFGVTLIEDEPYRELVFDEGRATPLVSRLRKSSWI YTGTVSKTLLPGLRVGFLIATPDLFPHLLRLKQSADLHTNRVGQWQALQWFGSEAYRQ HLAELREFYRVRRDAMQEALLEHFGELAEWNIPEGGLFFWLTLRQPLDTRTLLQPALA ADVAFMPGEPFFAEPEQNLGRLRLNFSHVAPERLHEGLRRLAKVVRDAQAAEAA" misc_feature 1800641..1801774 /locus_tag="PA1654" /note="DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; Region: ARO8; COG1167" /db_xref="CDD:440781" gene 1801851..1802453 /locus_tag="PA1655" /db_xref="GeneID:882280" CDS 1801851..1802453 /locus_tag="PA1655" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutathione S-transferase" /protein_id="NP_250346.1" /db_xref="GeneID:882280" /translation="MYKVYGDYRSGNCYKIKLAMSLLGIDYQWVPVDILKGETQTPEF LAKNPNGKIPVLELEDGSCLWESNAILNFLADGSALLPSEPRLRTQVLQWQFFEQYSH EPYVAVARFIKLYLGLPEARRAEFEEKKIGGYKALDVMEKQLSRTPFLVGEQFSIADI TLYAYTHVAHEGGFDLTAYPAIRAWIKRVGEVPGYVGMLD" misc_feature 1801851..1802447 /locus_tag="PA1655" /note="Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]; Region: GstA; COG0625" /db_xref="CDD:440390" protein_bind 1803325..1803340 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA1659, PA1658, PA1657, PA1656'" /bound_moiety="LasR" gene 1803626..1805182 /locus_tag="PA1656" /db_xref="GeneID:882166" CDS 1803626..1805182 /locus_tag="PA1656" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250347.1" /db_xref="GeneID:882166" /translation="MTYSSKLSSHYLELAEQPISKDVFAGEDVRFSSEYEALENELGK ALSLHENGQTDWLKILENSEALLRAQSKDLRVAAWLTWALYQRESFPGLLAGLGLLER LCSRHWVEIHPLKARTRAAAIAWLVPRLEQALNENVPIKEQLPLFRRLAEHLEKLDTA LTAQLGDDAPLLLPISRRLSGMLQRAADNQPEPGVVGAVVAQVKQAASQLLAPGAPID NERDAHKAMRAQQEAARPLCAWWLKQKATDLRALRLNRTMLWLPIESMPERNAEQVTA LRGVPADKLKSYQERFAQGLYADLLVELEASLARAPFWFDGQRLVWECLQGLNAEQAM REVEMHFALLLQRLPGLVELRFHDGSAFADAATRGWISAHVMPHLQNDSAPRKVETVA LQAEWDVALDEVQPVLRKDGLKAAVQVLKQGMKRAHGGRARFFWQLSLARLCFLAKKY ELAKTQLESLDHQLHESGLHAWEPDLALDVLHLLHSCCELLPQNHAVRERKEDIYRRL CHLDLEVVLE" misc_feature 1803674..1804405 /locus_tag="PA1656" /note="Type VI protein secretion system component TssA1/VasJ/EvfE, contains ImpA_N domain [Intracellular trafficking, secretion, and vesicular transport]; Region: TssA1; COG3515" /db_xref="CDD:442737" misc_feature 1804295..1805077 /locus_tag="PA1656" /note="Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ; Region: T6SS_VasJ; pfam16989" /db_xref="CDD:435696" gene 1805218..1805724 /locus_tag="PA1657" /db_xref="GeneID:879559" CDS 1805218..1805724 /locus_tag="PA1657" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250348.1" /db_xref="GeneID:879559" /translation="MAKEGSVAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTQRA DERKVEDRKPIGIDKMTFDEVLAKQELGLTLSVPNRLQEEGGSDELAVGLQINSMKDF NPASIVEQVPELKKLMELRDALVALKGPLGNAPAFRKAIESVLADDESRSRVLGELGL SAAPSQDA" misc_feature 1805224..1805718 /locus_tag="PA1657" /note="Predicted component TssA of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]; Region: TssB; COG3516" /db_xref="CDD:442738" protein_bind complement(1805318..1805330) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1657" /bound_moiety="AmrZ" gene 1805753..1807228 /locus_tag="PA1658" /db_xref="GeneID:879592" CDS 1805753..1807228 /locus_tag="PA1658" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250349.1" /db_xref="GeneID:879592" /translation="MSTSAAQQGRNQNGEYNILDSIIAETRLSPDDEAYDIAKRGVSA FIEELLKPQNDGEPVKKAMVDRMIAEIDAKLSTQMDEILHHPDFQALESAWRGLQLLV DRTNFRENIKIEILSVSKQDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIA NYYMSPSSPDVKLMQYVSSVACMAHAPFVAAAGPKFFGLESFTGLPDLKDLKDHFEGP QFAKWQSFRQSEDSRYVALTVPRFLLRTPYDPEENPVKSFAYKETVANSHEHYLWGNT AYAFGTKLTDSFAKYRWCPNIIGPQSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRR EYELAEEGFISLTMRKGSDNAAFFSASSVQKPKFFGISAEGKAAELNYKLGTQLPYMM IVNRLAHYLKVLQREQLGSWKERTDLELELNKWIRQYVADQENPSAEVRGRRPLRAAQ IIVSDVEGEPGWYRVSLNVRPHFKYMGADFTLSLVGKLDKE" misc_feature 1805795..1807222 /locus_tag="PA1658" /note="Predicted component TssB of the type VI protein secretion system, VipA/VipB/TssB family [Intracellular trafficking, secretion, and vesicular transport]; Region: COG3517" /db_xref="CDD:442739" gene 1807241..1807648 /locus_tag="PA1659" /db_xref="GeneID:880734" CDS 1807241..1807648 /locus_tag="PA1659" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250350.1" /db_xref="GeneID:880734" /translation="MTGYGSLFERLNGDADKRVGWSREVSAMASVAAHLGKMLSTRAG SVQTLSDYGLPDLNDMRLSLHDSLSQARSAIEGFIEAYEPRLSDVRVVSLPRDNDQLR LAFSIEGLLEVEGFKRQVSFSACLDGSGQVKVS" misc_feature 1807253..1807642 /locus_tag="PA1659" /note="type VI secretion system lysozyme-like protein; Region: VI_zyme; TIGR03357" /db_xref="CDD:274540" gene 1808193..1809773 /locus_tag="PA1660" /db_xref="GeneID:880603" CDS 1808193..1809773 /locus_tag="PA1660" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250351.1" /db_xref="GeneID:880603" /translation="MMHLLWPNYMRPLPAFSILQFDPLTRPGGALRVERDTPVESRPV GEVACRFRTCYATEVLPLVLEALNYSVTGEGALLGLRLAMNCDGHLGELGLSRLRLHL AGERYISQMLYLCLLRNLESIQLIPLDAHGRPLDGVAGKPMSFRLTGERVQPVGFAED EALIPYPLNTFRGYRYLQEYFAFQDKFLFVDVDGLDLLGALPEETLKQVRGLELRFDI RKSGIQRLHPTLENVKLYCTPVANLFRHDALPIRLDGKQDEYLLMPAEYSLEDCGVFS VEGVTGWRPGGLGYQAYVPFESFEHDPSFDVPEARPHYSVRQRTSLLHDGLDTYLSFG IRHPEQIETLSVELTCTNQNLPQRLRLGDICVACEGTPEFLGFRNITPATPSYAPPLN RDFLWKLISNMSLNYLSLANVDALKVILETYDLPRYYDQHAAKVSKRLLGGLKAVRHE HVDRLHRGLPLRGLRTELTIDPEGYIGEGDLFVFASVLNEFFALYASINSYHELRVRS TQGDVYQWKPRMGLQPLL" misc_feature 1808193..1809770 /locus_tag="PA1660" /note="Type VI secretion system, TssF; Region: T6SS_TssF; cl15462" /db_xref="CDD:472810" gene 1809737..1810744 /locus_tag="PA1661" /db_xref="GeneID:880788" CDS 1809737..1810744 /locus_tag="PA1661" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250352.1" /db_xref="GeneID:880788" /translation="METAHGFAAPAVSALARGIREYSLFQAVLLVMDRLRQEHPGLGD EALYDQLEFQANPSLGFPGSDVDRVEFFEERGMLRARLRFNLIGLFGASSPLPAFYSE QALGDSEEGNPTRNFLDLFHHRLHRLLLPIWRKYRYRVSFQSGASDAFSAQLFALVGL GGEEIRKARELNWKRLMPYLGLLSLRAHSAALIESVLRYYFKHAELVAEQCIERRVAI LEEQRNRLGLFNSQLGEDAVLGERVRDRSGKFRIHIRQLDWQRFHEFLPIGPGYQPLC ALVRFTLRDPLDYDIRLVLRHEEIREFRIGAQNACRLGWTSWLGRERADGVVTLGSKI H" misc_feature 1809737..1810714 /locus_tag="PA1661" /note="Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]; Region: COG3520" /db_xref="CDD:442742" gene 1810751..1813384 /locus_tag="PA1662" /db_xref="GeneID:878010" CDS 1810751..1813384 /locus_tag="PA1662" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ClpA/B-type protease" /protein_id="NP_250353.1" /db_xref="GeneID:878010" /translation="MSMINVDLQQLIQALDADTRRDLEGSAERCVARGGSKVLVEDLL LGLLERPQGLLARALQDAAVDAGELNAALQARGEHSASRNPVFAPELVQWLQDALLLA NLELGRSQIDQAALILALLRNPLRYAGSRYQPLLARLDIERLKDFALSQPLEGAPSGK PGGGESLLQRFTHNLTQQARDGKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVG KTAIVEGLASRIAAGEVPPALRDVELLSLDMGLLQAGASVKGEFERRLKGVIDEVKAA PRPTILFIDEAHTLIGAGGQAGGSDAANLLKPALARGELRTIAATTWAEYKKYFEKDP ALARRFQPVQLHEPSVAEAVTILRGLARVYEESHGIYLRDDAVVAAAELSARYLAGRQ LPDKAVDVLDTACARVRISLAAAPESLERLRGELAEGERQRQALRRDAEAGLPIDHDA LQALEERLAQAESERHVQEDQWSRQRELAERLLALRQQLARAREANREEQGSEADAEA FPADEHGGVEALEKALHETRQALADAQAQGRLVSFEVCPRLVAEVIGAWTGVPVEQLA REHNAKVMGFADDLRTRIRGQEQAVSALDRAMRATAAGLNKPDAPVGVFLLVGPSGVG KTETALALADLLYGGERFITTINMSEFQEKHTVSRLIGAPPGYVGYGEGGMLTEAVRQ KPYSVILLDEVEKADPDVLNLFYQIFDKGVANDGEGREIDFRNTLILMTSNLASEHIA ALCQDGARPSAELLEETIRPALSRHFKPALLARMRVVPYYPVGGPVLRELIEIKLQRL GERLARRQLAFDYSQALVGHLAERCTQSDSGARLIDHLLDTHLLPLVADRLLEAMARD ERLERVHATLGEHGRVLCEFA" misc_feature 1810793..1813348 /locus_tag="PA1662" /note="type VI secretion ATPase, ClpV1 family; Region: VI_ClpV1; TIGR03345" /db_xref="CDD:274528" gene 1813395..1814906 /locus_tag="PA1663" /db_xref="GeneID:880608" CDS 1813395..1814906 /locus_tag="PA1663" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250354.1" /db_xref="GeneID:880608" /translation="MFSRVPQPLAFAEALLAQFGALSRETDITALLGGFARAVGELSG CELSQLYLLDQTHTALTLNAECRDGLLQALEPSSLPADYTGEQLLQFALCQNRVVSLV DLPSRLHETGFLPAGEQPWLSLLCVPLVSPEKTVEGMVVCATRRPLDLQGFAHPLGQL GSFVLAQLHLLQRLSQPSGEPQGPSSAPVVSGYGLIGRSAAMRETCRLISKVLHNPYT VLLQGETGTGKEVVARAIHEYGPRRAQAFVVQNCAAFPENLLESELFGYRKGAFTGAE RDRPGLFDAADGGTLLLDEIGDMPLSLQAKLLRVLQEGEIRPLGGNDTHKVDVRIIAA THRDLALLVRDGKFREDLYYRLAQFPIELPPLRQREGDALELARHFAERACVFLRRAP LGWSAEALELLDGYGFPGNVRELKGLVECAVLLCEGEMLLAEHFSLRAPPEAEAPLKL REHLEQIERDLLLACLRRNAGNQTLAARELGLPRRTLIYRMGRLNIHFGDPRT" misc_feature <1813974..1814882 /locus_tag="PA1663" /note="RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:443041" protein_bind complement(1814426..1814438) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1664" /bound_moiety="AmrZ" protein_bind 1814466..1814478 /locus_tag="PA1663" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1664" /bound_moiety="AmrZ" gene 1814995..1815135 /locus_tag="PA1664" /db_xref="GeneID:880635" CDS 1814995..1815135 /locus_tag="PA1664" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250355.1" /db_xref="GeneID:880635" /translation="MPVRHWPAVLLALAVLCGLAGCSGNYKFNDGDYRPLGDPQAVNR GK" gene 1815153..1816346 /locus_tag="PA1665" /db_xref="GeneID:881944" CDS 1815153..1816346 /locus_tag="PA1665" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250356.1" /db_xref="GeneID:881944" /translation="MELVLEMLSAKQFVPTELCSKTFGRNGGLIGRGGECDWAIPDRK RHLSKQHARVSYRNGAFYLTDTSSNGIRAGNGSRLPHGEPQRIEQDSVFLLGDFEIRA RLLREPDELAMDVGRPQPAGSIIPDDAFLALDPLQALDQDGADAYELDDLSAIAQPSH EAGARADYARIDMESLVVPELVPAPAAPQEPVESPPPERDEAFWQRFGQALGVDLEGL DGAAREALAIDAAGLLRQCIGGLQQSLRTRSELKNELRLSLSTLRDTGKNPLRFSADA GEALGHLLRDGKPGQLSGEQAVARSFRDLQAHQVALLGASRAAVRATLEHFSPQQLAL RFERDGRRPLLATSGSRWRAYGRYHQSLCQDDDWSERLLARDFAQAYEEQVRLISTLY TEHQG" misc_feature 1815159..1816310 /locus_tag="PA1665" /note="type VI secretion system FHA domain protein; Region: VI_FHA; TIGR03354" /db_xref="CDD:274537" gene 1816352..1816858 /locus_tag="PA1666" /db_xref="GeneID:882020" CDS 1816352..1816858 /locus_tag="PA1666" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250357.1" /db_xref="GeneID:882020" /translation="MSRRPIPPARALAMLAVLALLAGCSTLSPYSRLTKLDLALSAGE RVNPDLNGRPSPVVVRLFELKHPVAFENADFFSLYERPKETLDPDLVTSEELELRPGE RVELKLSVEEGSRYVGVLAAYRDLGEASWRYVVPVTAKELTRVELKLGQKGILNAGEL LGKAGDAR" misc_feature 1816424..1816813 /locus_tag="PA1666" /note="type VI secretion lipoprotein, VC_A0113 family; Region: VI_chp_3; TIGR03352" /db_xref="CDD:274535" gene 1816855..1818186 /locus_tag="PA1667" /db_xref="GeneID:881962" CDS 1816855..1818186 /locus_tag="PA1667" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250358.1" /db_xref="GeneID:881962" /translation="MNVHKIVWQEGMLLRPQHLQHNDRYYDNQMKARTQLLGSYNWGF LALELDRQFLNMGKLVISQASGVLPDGSLFELGGNTEPLALDVPPNTSNVPIYLALPL VTGNHIEARRPEQAEVLARYTAYDLEVADSNAGEDSMVQVSCARPDFRLLLGEQQSDQ AYVKLKVAVVLDSTPDGVISLDPDFVPSYLHAHASAYLLSCLKEVISMLGHRGDTIAE RIRSNGKVGGAEVGDFMMLQLINRTELLLRHYLGLEQVHPEQLYRVLLTMLGDLATFG SESKRPRLDSRYQHSDQGASFRRLMEAIRQVLSMVLEQHAIELPLQARQYGILVSPLH DHKLLGSASFVLAASANCESEELRQRLPAHLKVGAVEHIRQLVNLHLPGIRVKPLPVA PRQIPFHSNKTYFILEPNAEDMAQLERSGGFAFHVSGEFSELELKFWAIRN" misc_feature 1816864..1818183 /locus_tag="PA1667" /note="Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]; Region: COG3522" /db_xref="CDD:442744" protein_bind complement(1817756..1817768) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1668" /bound_moiety="AmrZ" protein_bind 1817794..1817806 /locus_tag="PA1667" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="'Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1668, PA1669'" /bound_moiety="AmrZ" protein_bind 1817827..1817839 /locus_tag="PA1667" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1669" /bound_moiety="AmrZ" gene 1818189..1819058 /locus_tag="PA1668" /db_xref="GeneID:882100" CDS 1818189..1819058 /locus_tag="PA1668" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250359.1" /db_xref="GeneID:882100" /translation="MIKEREYHEDEKTVLLDHQGQVPAQGPLTDFAEPPRFEQLEERM IYAARLRPGEAFNVSLNPLVAAASELLSEVVRLKHSTVLENLAALKERLTSAMKLFEF RAVQDGVENSQVMAARYVLCTVVDEAVVTTPWGNESEWSKISLLSSFHNETFGGEKFF QLLDRLSKNPVKHLPMLELMYLCLALGFEGKYRVMARGVLDLDGISDALYRQIRQLRG DVPRELSPHWQGLSDQRRGLVRIVPWWMVALFTLVCLVVMYSGFAWVLGEQRDTVLQP YQSLDAAAGQPGS" misc_feature 1818363..1819031 /locus_tag="PA1668" /note="Type VI protein secretion system component TssL/VasF/DotU [Intracellular trafficking, secretion, and vesicular transport]; Region: DotU; COG3455" /db_xref="CDD:442678" gene 1819074..1822601 /locus_tag="PA1669" /db_xref="GeneID:882077" CDS 1819074..1822601 /locus_tag="PA1669" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250360.1" /db_xref="GeneID:882077" /translation="MKNFFKKVGAFLRKTWVWTLLLVLLAALLVWFVGPLLAVADYKF WESPTSRLLSISLMFLVWGLAMVFVSWRAGVRRKAVEDSDEGQERLRRDGLIEDEQKE LRSRFKDALRTLKTSSLYRGRSERWRNELPWYLLIGPQGSGKTSLLDFSGLEFPINRI DRKLTRDTAGTRYCDWYFADHGVLIDTAGRYLTQADGEVDGGAWATLLGLLRKRRRAR PLNGVMVSIPVETLLSDDEMALDTLARQVRARLQEIQQTLHLDLPVYLVLSKADQLLG FDEFFDQLSREESDQVLGTSFGKEQNGTDVTVLRQAFEDLLRRLNSQVIMRIHQERDT LRRGRILDFPHQLGQIGERLCLFVELAFTGNRYQRASRLRGFYLTSAPHLAQQLDEDT AGIGANLGIASGLLPTLRNGRSRFIHHLLSQVIFPEANLAGLDRRERTRIHWGQRALY VGSLALLLLFGLLWAGGFSANHERLERLRELAQQWTQQRQALGERDDAMAALKTLDSS YAATTVFPPKGEVSLHERAGLYQGNEVNPPLAAAYRRELETQLLPRVARMLEAQIRGN MQNRERLLNSLRAYLMLNLRERRENGWLKDWVATDWSQRYAGNGTVQNGLNTHFARLL EQPFSYPLNETLVAQARQVLRSESLANVVYRVLREQARSLPEYRFGQHLGPQAGLFVG TDYVIPGFYTQQGYQQYFVVQGASLVNDILRDNWVLGEGSGISDMDLRRLMVELEQLY FRDYANFWSEAVGRLGLLPFNDAGEGADQVSGLLAANSPILQLLLEVRENTRFPVLAE SAEALAEASDKAAEKGGKLGKAAAAAAGKARDALAKNLPDTAKKSLQRRFEPLHRLLD DNNGPAADLTPLLQALNELQLQLAGLARASQPEQAAFDMAKSRMGGQRDALSNLRNAS ARLPRPLGGWFSVLAEDAWRLVLGDAYLYLNQRYQSELYGFYSKAINKRYPFNAHSAS DVAVSDFREFFKAQGVAERFFETYMRPFVSGDPGSYRLRSVDGYSLPMSKVYLDQMGT AQLIRQSFFAENPAEPQVRFRLEPYTLDPGVSRAEFRFDGQSMEYRHGPIVPMSFKWP SDADGGRTSLVLEKMAGRPVGIERNTGPWSLFRLFDLMQTEYLSGRDVMVLKADLGGL RANYLLLAQRTPNPFDLAVLRSFRMPVQL" misc_feature 1819167..1822589 /locus_tag="PA1669" /note="type VI secretion protein IcmF; Region: VI_IcmF; TIGR03348" /db_xref="CDD:274531" gene 1822601..1823329 /gene="stp1" /locus_tag="PA1670" /db_xref="GeneID:882277" CDS 1822601..1823329 /gene="stp1" /locus_tag="PA1670" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="serine/threonine phosphoprotein phosphatase Stp1" /protein_id="NP_250361.1" /db_xref="GeneID:882277" /translation="MQRTEPWRSAARTDRGKVRARNEDAFLDCPDRGLWAVADGMGGH QAGDLASRMIVTSLAELPARAGFDERLNAMRQCLHWLNRRLGEELTLSAERGDRIIGS TVVALVVEGSRAACVWVGDSRCYLWRGQRLYQLSRDHSLLQRLVDERRMDIEQARAYP SARALTRAVGASEQLVLDVLELEVHPGDVFLLCSDGLYEELSADALGRALSLASPQVA VERLFDGALSGAARDNLTAVVIRQ" misc_feature 1822619..1823323 /gene="stp1" /locus_tag="PA1670" /note="Serine/threonine protein phosphatase PrpC [Signal transduction mechanisms]; Region: PTC1; COG0631" /db_xref="CDD:440396" gene 1823326..1824315 /gene="stk1" /locus_tag="PA1671" /db_xref="GeneID:883070" CDS 1823326..1824315 /gene="stk1" /locus_tag="PA1671" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="serine-threonine kinase Stk1" /protein_id="NP_250362.1" /db_xref="GeneID:883070" /translation="MNEPLSSLELLPEEEGGANLTYFAFAAPTASAPDLPAVLPGPLP DVLSGRYRLERMLGAGGMGTVYRARDLLHEQFGDPAPLVALKLLNESVAESPDASALL YSEFALTRRLRHPNVVRLFTFDVDTACQRAYIVMELMPGLPLDRLLCERPEGLPWSEL SAIARPLLDVLAYVHEQGVLHGDLKPSNVMLGEEGVRLFDFGLGQAQAGILDGLPQLS RGRIDAWTPGYAAPELLEGAPLSPAADLYALACVLYELADGRHPFRRLPSNQAREQGL ERQLRAPRHLPRRCWPALRTALSLDPERRCIGVRELQEALGARRSWLAGVLAR" misc_feature 1823473..1824273 /gene="stk1" /locus_tag="PA1671" /note="Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; Region: STKc_PknB_like; cd14014" /db_xref="CDD:270916" misc_feature order(1823473..1823475,1823545..1823550,1823653..1823655, 1823668..1823670,1823683..1823694,1823734..1823736) /gene="stk1" /locus_tag="PA1671" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:270916" misc_feature order(1823494..1823499,1823503..1823514,1823518..1823520, 1823575..1823577,1823581..1823583,1823677..1823679, 1823731..1823742,1823752..1823754,1823758..1823760, 1823872..1823874,1823878..1823880,1823884..1823889, 1823893..1823895,1823920..1823925,1823932..1823934, 1823983..1823985,1824001..1824009) /gene="stk1" /locus_tag="PA1671" /note="active site" /db_xref="CDD:270916" misc_feature order(1823494..1823499,1823503..1823514,1823518..1823520, 1823575..1823577,1823581..1823583,1823677..1823679, 1823731..1823742,1823752..1823754,1823878..1823880, 1823884..1823889,1823893..1823895,1823920..1823925) /gene="stk1" /locus_tag="PA1671" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270916" misc_feature order(1823506..1823508,1823752..1823754,1823758..1823760, 1823872..1823874,1823878..1823880,1823884..1823886, 1823932..1823934,1823983..1823985,1824001..1824009) /gene="stk1" /locus_tag="PA1671" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270916" misc_feature order(1823920..1823946,1823971..1823985,1824001..1824009) /gene="stk1" /locus_tag="PA1671" /note="activation loop (A-loop); other site" /db_xref="CDD:270916" gene complement(1824343..1824723) /locus_tag="PA1672" /db_xref="GeneID:883025" CDS complement(1824343..1824723) /locus_tag="PA1672" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250363.1" /db_xref="GeneID:883025" /translation="MNLIAHVEIPVSDLERAMRFYASVFGVAFGEVATLHGSRMAHFP FEEGRDGASGALAEGDVYVPTLHGAIIYLNVADLDAVIARALGEGSEILFPKTPLGDG VFIAEIRDSEGNRIALQSACGERP" misc_feature complement(1824364..1824714) /locus_tag="PA1672" /note="N-terminal domain of Streptomyces griseus SgaA and similar domains; Region: SgaA_N_like; cd07247" /db_xref="CDD:319911" gene 1824969..1825430 /locus_tag="PA1673" /db_xref="GeneID:879280" CDS 1824969..1825430 /locus_tag="PA1673" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="bacteriohemerythrin" /protein_id="NP_250364.1" /db_xref="GeneID:879280" /translation="MAHLVWQDDLNTGIQVIDNQHKRIVEMINHLHDAQQGKEHAAIA EVIEELVDYTLSHFAFEETLMEDAGYQFSRAHKKIHELFIRRVSEYRVRFQAGEDVGD ELKGLLSRWLFNHIRNDDAGYVDAVRHSMSELVKDKSEGGWLSRSMKRFFG" misc_feature 1824969..1825418 /locus_tag="PA1673" /note="bacteriohemerythrin; Region: PRK00808" /db_xref="CDD:179132" gene complement(1825495..1826040) /gene="folE2" /locus_tag="PA1674" /db_xref="GeneID:879308" CDS complement(1825495..1826040) /gene="folE2" /locus_tag="PA1674" /EC_number="3.5.4.16" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase I" /protein_id="NP_250365.1" /db_xref="GeneID:879308" /translation="MSLEQHYSSILTQLGEDVNREGLLDTPKRAAKAMKYLCRGYQQS LEEVVNGALFSSDNSEMVLVKDIELYSLCEHHLLPFIGKAHVAYIPNGKVLGLSKVAR IVDMYARRLQIQENMSRQIAEAVQQVTGALGVAVVIQAQHMCMMMRGVEKQNSSMVTS VMLGEFRDNAATRSEFLSLIR" misc_feature complement(1825498..1826034) /gene="folE2" /locus_tag="PA1674" /note="GTP cyclohydrolase I [Coenzyme transport and metabolism]; Region: FolE; COG0302" /db_xref="CDD:440071" gene complement(1826118..1826675) /locus_tag="PA1675" /db_xref="GeneID:883104" CDS complement(1826118..1826675) /locus_tag="PA1675" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250366.1" /db_xref="GeneID:883104" /translation="MQDDDFSLFKSEMRGVKRISVDRADTGKPRNDRQQLKQRQLNAS VRNDEIRVDGLSDQFVIDVGPEDELSWARDGVQESQLRKLKQGLVPFDGSLDLHGMSV EKARQTLWDFLAEATRLEIRCVRVTHGKAARKDGRSPLVKSHVNTWLRQHPQVLGFTS CLPRHGGTGSVYVMLRRTMLEGRDE" misc_feature complement(1826142..1826675) /locus_tag="PA1675" /note="DNA-nicking endonuclease, Smr domain [Replication, recombination and repair]; Region: SmrA; COG2840" /db_xref="CDD:442088" gene complement(1826732..1827052) /locus_tag="PA1676" /db_xref="GeneID:883063" CDS complement(1826732..1827052) /locus_tag="PA1676" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250367.1" /db_xref="GeneID:883063" /translation="MKLSDSFDARRLRPRRPRVWRWRLAAAFAALVASLGVLLSLAGT SALIGRQPAVGMLHIEPAAGGVLLALGLLSLCLGVFFWRFSRRRSRRNSDLSLSPNLM KKRD" protein_bind 1826826..1826838 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 1826841..1826853 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 1826852..1826864 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(1827225..1827821) /locus_tag="PA1677" /db_xref="GeneID:878547" CDS complement(1827225..1827821) /locus_tag="PA1677" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250368.1" /db_xref="GeneID:878547" /translation="MPHPLTLLQISGRGYPPAPLRQSTLLIIDAQEEYRSGALRLPGL DAAAAEIGVLVQAARASGTPIVHVRHLGIQGGLFDPQGPRGQFLPELQPEAGEKVVEK RLPNAFSGTELHDLLQNHGRLDLIVCGFMTHSSVSTTVRAAKDYGYRCTLADSACATR DIPTLNGGVLSAADLQRAEIAALGDNFAAIVAQARELL" misc_feature complement(1827288..1827752) /locus_tag="PA1677" /note="Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia; Region: nicotinamidase_related; cd01014" /db_xref="CDD:238496" misc_feature complement(order(1827417..1827419,1827516..1827518, 1827735..1827737)) /locus_tag="PA1677" /note="catalytic triad [active]" /db_xref="CDD:238496" misc_feature complement(1827429..1827434) /locus_tag="PA1677" /note="conserved cis-peptide bond [active]" /db_xref="CDD:238496" gene 1827992..1828906 /locus_tag="PA1678" /db_xref="GeneID:878096" CDS 1827992..1828906 /locus_tag="PA1678" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L3 glutamine methyltransferase" /protein_id="NP_250369.1" /db_xref="GeneID:878096" /translation="MSESRLLTLRDYIRWAVSRFHAAGLFFGHGTDNAWDEARHLVLG SLHLPWEISDSYLDCRLEDDERAELAEILRRRIEERIPAAYLLGEAWFCGIPFSVDER VLVPRSPIAELIEQRFAPWLPAEPARILDLCTGSGCIGIACAYAFEQAEVVLADLSFD ALEVANVNIERHDLGERVYTVQGDGFAGLPGQRFDLIVSNPPYVDAEDFADMPAEFHH EPELGLACGDDGLDLVRRMLAEAADHLSEKGLLIVEVGNSEVHVQALYPEVDFTWLEF EHGGHGVFMLSAAQCREHRELFRSRLEK" misc_feature 1828007..1828855 /locus_tag="PA1678" /note="protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; Region: L3_gln_methyl; TIGR03533" /db_xref="CDD:274633" gene complement(1828931..1829710) /locus_tag="PA1679" /db_xref="GeneID:883102" CDS complement(1828931..1829710) /locus_tag="PA1679" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250370.1" /db_xref="GeneID:883102" /translation="MIDSDTQPAAEEAEKKPPHPWAELAPEHFRLLRLAPLPTDRATG ARPLRFVQLGRVERHSADQSLLRLSIQVPGLMLRKEQNLLEVWADHRNKEVRFGSDAG LSLEPLNRGLGRFLLAQAIAWAQRRWAHYKVEGGALALKDGLTEDARLRRDHFIRAQG FDVSYEDQRLLKARYSAGRVSELHSDWHKDKVQIVPLLDAAAMLEQAEQTLQAQDAEI RQLEQRINHYRRDDTSLRFTIACLTAFAVFQAGLLIWIATH" gene complement(1829788..1830771) /locus_tag="PA1680" /db_xref="GeneID:883028" CDS complement(1829788..1830771) /locus_tag="PA1680" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250371.1" /db_xref="GeneID:883028" /translation="MKTSMPRALLALFCLLASLAHAAPNSILHRPYDLDTGHGVLRGS LLLPRSAVPPPVVLLVAGSGPTDRDGNNPFGGNNRYLLRLAEALAERGIASVRYDKRG VARSLAAAPREEDLSVGVYVDDVVAWSERLARDPRFSRLILVGHSEGALIASLAAPRT PAEELIAIAGSGQPIDRVLREQLRGRLPPAQLRQADSVLASLKAGETRGDIPPALANL LRPSVQPYLISLFREDPARAFGRLRIPTLIVQGRNDIQVGVADAEALQRAKPDSQLVL IDGMNHILRIAPSTGLQQLSAYNDPNLPLARQLVEAVSRFILRGAEAEKGR" misc_feature complement(1829920..1830687) /locus_tag="PA1680" /note="Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism]; Region: PldB; COG2267" /db_xref="CDD:441868" protein_bind complement(1830779..1830791) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="'Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1679, PA1680'" /bound_moiety="AmrZ" gene 1830879..1831970 /gene="aroC" /locus_tag="PA1681" /db_xref="GeneID:879481" CDS 1830879..1831970 /gene="aroC" /locus_tag="PA1681" /EC_number="4.2.3.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="chorismate synthase" /protein_id="NP_250372.1" /db_xref="GeneID:879481" /translation="MSGNTYGKLFTVTTAGESHGPALVAIVDGCPPGLELSARDLQRD LDRRKPGTSRHTTQRQEADEVEILSGVFEGKTTGTPIGLLIRNTDQKSKDYSAIKDLF RPAHADYTYHHKYGVRDYRGGGRSSARETAMRVAAGAIAKKYLAGLGIQVRGYMSQLG PIEIPFRSWDSVEQNAFFSPDPDKVPELEAYMDQLRRDQDSVGAKITVVAEGVPPGLG EPIFDRLDAELAHALMSINAVKGVEIGAGFASIAQRGTEHRDELTPQGFLSNNAGGIL GGISSGQPIVAHLALKPTSSITTPGRSIDTAGEPVDMITKGRHDPCVGIRATPIAEAM MAIVLLDQLLRQRGQNADVRVDTPVLPQL" misc_feature 1830900..1831952 /gene="aroC" /locus_tag="PA1681" /note="chorismate synthase; Validated; Region: PRK05382" /db_xref="CDD:235438" misc_feature order(1830909..1830929,1830948..1830950,1830954..1830956, 1830960..1830962,1830972..1830977,1831074..1831079, 1831083..1831088,1831107..1831112,1831116..1831118, 1831122..1831124,1831128..1831130,1831209..1831223, 1831251..1831256,1831278..1831280,1831461..1831463, 1831476..1831493,1831524..1831526,1831530..1831538, 1831548..1831550,1831554..1831559,1831566..1831574, 1831578..1831583,1831587..1831589,1831596..1831610, 1831617..1831622,1831626..1831631,1831641..1831646, 1831692..1831694,1831701..1831709,1831713..1831721, 1831740..1831742,1831746..1831757,1831764..1831766, 1831878..1831880) /gene="aroC" /locus_tag="PA1681" /note="Tetramer interface [polypeptide binding]; other site" /db_xref="CDD:143612" misc_feature order(1830933..1830935,1831020..1831022,1831191..1831196, 1831254..1831265,1831272..1831274,1831587..1831592, 1831749..1831754,1831758..1831766,1831845..1831847, 1831857..1831859) /gene="aroC" /locus_tag="PA1681" /note="active site" /db_xref="CDD:143612" misc_feature order(1831191..1831199,1831251..1831253,1831257..1831259, 1831584..1831592,1831752..1831754,1831758..1831766, 1831836..1831838,1831845..1831847,1831854..1831856) /gene="aroC" /locus_tag="PA1681" /note="FMN-binding site [chemical binding]; other site" /db_xref="CDD:143612" gene 1832014..1833165 /locus_tag="PA1682" /db_xref="GeneID:879440" CDS 1832014..1833165 /locus_tag="PA1682" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="MFS metabolite transporter" /protein_id="NP_250373.1" /db_xref="GeneID:879440" /translation="MTSAVPYWRLSSFYFFYFSLLGATAPFLALYFHHLGFPSPRIGE LVAIPMLMRCVAPNLWGWLGDRSGQRLAIVRFGAVCTALGFSLIFVSHSYAWLALVMA LHAFFWHAVLPQFEVITLAHLRERSASYSRIRLWGSIGFICTVVGLGALFERLSLDVY PATLLGIMLGIVLCSWWVPNAQPAHREPREGEGGFLAQLRQPGVLAFYLCVCLMQLSH GPYYTFLTLHLESLGYSRALIGLLWALGVVAEVMLFLAMPRLLQRFSLRQVLAASFLL ASLRWLLLGNLADSLALLVFAQTLHAATFGSFHAAAIHFVQRSFGLRQQGQGQALYAA LAGTGGALGALYSGYSWNSLGPAWTFAIASLAALLAAAIISTRLQEVRA" misc_feature 1832038..1833093 /locus_tag="PA1682" /note="Major facilitator superfamily domain-containing protein 6; Region: MFS_MFSD6; cd17335" /db_xref="CDD:340893" misc_feature order(1832062..1832067,1832074..1832079,1832086..1832088, 1832182..1832184,1832335..1832340,1832344..1832352, 1832359..1832361,1832413..1832415,1832422..1832427, 1832434..1832436,1832644..1832646,1832653..1832658, 1832665..1832673,1832680..1832682,1832761..1832763, 1832773..1832775,1832923..1832928,1832938..1832940, 1832950..1832952,1833013..1833015,1833019..1833024, 1833031..1833036,1833043..1833045) /locus_tag="PA1682" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340893" gene 1833162..1833779 /locus_tag="PA1683" /db_xref="GeneID:877627" CDS 1833162..1833779 /locus_tag="PA1683" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="methylthioribulose-1-phosphate dehydratase" /protein_id="NP_250374.1" /db_xref="GeneID:877627" /translation="MNDNREQLTQQIIDAGRFLYGRGWSPATSSNYSARLDEQRALLT VSGKHKGQLGFDDVLATDLAGNSLEPGKKPSAETLLHTQLYAWNPAIGAVLHTHSVNA TVLSRLVRGDRLVLQDYELQKAFAGVTTHEGQVEVPIFDNDQDIARLASRVQPWLEAH PHCPGYLIRGHGLYTWGARMSDALRQVEAFEFLFECELKVLSLSR" misc_feature 1833168..1833776 /locus_tag="PA1683" /note="methylthioribulose 1-phosphate dehydratase; Region: PRK09220" /db_xref="CDD:236415" misc_feature order(1833201..1833203,1833213..1833215,1833237..1833239, 1833306..1833308,1833312..1833317,1833453..1833455, 1833459..1833464,1833477..1833485,1833507..1833509, 1833513..1833518,1833558..1833560,1833669..1833671, 1833702..1833704,1833723..1833725,1833735..1833737, 1833756..1833758) /locus_tag="PA1683" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:238232" misc_feature order(1833252..1833254,1833297..1833302,1833384..1833392, 1833447..1833449,1833453..1833455,1833672..1833674) /locus_tag="PA1683" /note="active site" /db_xref="CDD:238232" misc_feature order(1833447..1833449,1833453..1833455,1833672..1833674) /locus_tag="PA1683" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:238232" gene 1833776..1834321 /locus_tag="PA1684" /db_xref="GeneID:877764" CDS 1833776..1834321 /locus_tag="PA1684" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="acireductone dioxygenase" /protein_id="NP_250375.1" /db_xref="GeneID:877764" /translation="MSSLTVYHENQPEQPLKLLTHAEDIASTLAEVGVRFERWEAAAP IAAGASQDEVIAAYAHEIERLKRERGYITVDVVSLNSDHPQKAELRAKFLDEHRHGED EVRFFVAGRGLFVLHIEEHVYAVLCERNDLISVPAGTRHWFDMGEHPHFVAVRLFNNP EGWVAQFTGDDIASRFPLLED" misc_feature 1833776..1834318 /locus_tag="PA1684" /note="Acireductone dioxygenase (methionine salvage), cupin superfamily [Amino acid transport and metabolism]; Region: Adi1; COG1791" /db_xref="CDD:441396" gene 1834393..1835142 /gene="masA" /locus_tag="PA1685" /db_xref="GeneID:878111" CDS 1834393..1835142 /gene="masA" /locus_tag="PA1685" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="enolase-phosphatase" /protein_id="NP_250376.1" /db_xref="GeneID:878111" /translation="MTIKAILTDIEGTTSAVSFVFDVLFPYAARHLPDFVREHAGETE VAAQLAAVRAESGEADADVERVIAILLQWIAEDRKATPLKALQGMVWAQGYRDGQLKG HVYPDAVQALREWKARGLDLYVYSSGSIQAQKLIFGCSEAGDLGSLFSGYFDTTSGPK RESASYARIAGAIGLPAAEILFLSDVVQELDAARDAGMRTLGLAREGGSLDGHPTVAS SPTSSWSERAGYPEGTLLLGSIAPWVPPSAG" misc_feature 1834393..1835046 /gene="masA" /locus_tag="PA1685" /note="Enolase-phosphatase E1 involved in merthionine salvage [Amino acid transport and metabolism]; Region: Utr4; COG4229" /db_xref="CDD:443373" gene complement(1835325..1836218) /gene="alkA" /locus_tag="PA1686" /db_xref="GeneID:878163" CDS complement(1835325..1836218) /gene="alkA" /locus_tag="PA1686" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA-3-methyladenine glycosidase II" /protein_id="NP_250377.1" /db_xref="GeneID:878163" /translation="MSQPTSPLVLHLPYQSPWEWRQFHQHFALRLLAGVESLGDDHYA RSFRANGRPAWFEVRPLAERQVLALSLSPSAHALAAELEARVRRMFDLDSDPAAIARH FAGDPLLGPLVAANPGLRLPVAFDPFEQAVRAIVGQQVTVKAAVTITGRLIQRLGEPL EDLGYDGISHLFPTPAALAQANLDGIGMPGKRVQTLQRFAAAIASGELSLDLADGPEA LVERLCALPGIGPWTAEYIALRAMGEADAFPAADLGLLKSTVWGPQGIDARSLKARAE AWRPWRAYAAIHLWHHYAAGG" misc_feature complement(1835343..1836107) /gene="alkA" /locus_tag="PA1686" /note="3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [Replication, recombination and repair]; Region: AlkA; COG0122" /db_xref="CDD:439892" gene 1836367..1837227 /gene="speE" /locus_tag="PA1687" /db_xref="GeneID:883061" CDS 1836367..1837227 /gene="speE" /locus_tag="PA1687" /EC_number="2.5.1.16" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="polyamine aminopropyltransferase" /protein_id="NP_250378.1" /db_xref="GeneID:883061" /translation="MSDYQETLYQGYGQRFSIDNMLHEVRTEHQHLVIFENARMGRVM ALDGVIQTTEADEFIYHEMLTHVPILAHGAARRVLIIGGGDGGMLREVAKHKSVERIT MVEIDGTVVDMCKEFLPNHSQGAFDDPRLNLVIDDGMRFVATTEERFDVIISDSTDPI GPGEVLFSENFYQACRRCLNEGGILVTQNGTPFMQLEEVRTTAARTDGLFADWHFYQA AVPTYIGGAMTFAWGSTHEGLRRLPLETLRQRFRDSGIATRYYNADIHLGAFALPQYV LQAIGKQDND" misc_feature 1836376..1837209 /gene="speE" /locus_tag="PA1687" /note="polyamine aminopropyltransferase; Region: PRK00811" /db_xref="CDD:234843" misc_feature order(1836607..1836627,1836679..1836684,1836772..1836780, 1836829..1836831) /gene="speE" /locus_tag="PA1687" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 1837388..1838257 /locus_tag="PA1688" /db_xref="GeneID:877831" CDS 1837388..1838257 /locus_tag="PA1688" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250379.1" /db_xref="GeneID:877831" /translation="MLTKRLRQSGVVVSCLLGSVLFIALAFLGWQRFAPAATVSGWTY RVVLEDIPHVSALARDPDGLLYVSQELQDGKGLVFRIAADGSRDTVLDGLSKPDGMAS FRDGIAISQEQGASPVFWWHAQQARPLFDGIQVEGVASDGRYLYAAEDRDLDGRILRY DPETGGLTVLREGLQRSEGVAACPDGSVFYTEKKRGHVMRLHEGAEDEVVLNGLNAPS FLLCDSEGLWITEDSTHNARALLLPPDGPLQVIVRRLRSAQSLLPIGPGRYLLAEQGR DRILEIERQKSEL" misc_feature 1837481..1838107 /locus_tag="PA1688" /note="Streptogramin lyase [Defense mechanisms]; Region: Vgb; COG4257" /db_xref="CDD:443399" gene 1838260..1840362 /locus_tag="PA1689" /db_xref="GeneID:879257" CDS 1838260..1840362 /locus_tag="PA1689" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250380.1" /db_xref="GeneID:879257" /translation="MDQTEVRTTQSPPRLFQPTIRSHLAFTALSALVLLVMFSLLRLA LLIYNRELIGATPASTFLEAFGNGVRFDLRVVVYAVAPLVLSLFAVRAMAARGLFRTW LTLFASITLFLGVLELDFYREFHQRLNSLVFQYMSEDPKTVMSMLWYGFPVVRYLLAW AFATWVLYRVFKAIDLVTRPSQRKPREDSVIARPSAAAPWYVRGVVLFLCVLVCVLAA RGTLRQGPPLRWGDAFTTESMFANQLGLNGTLTLVKAAKERFSEDRANIWKATLDDKV ALETTRQMLLTPNDKLVDADEAAVRREFTPPAANTLPIRNVVVVLLESFAGHYVGALG APGNITPYFDKLSKEGLLFTQFFSNGTHTHQGMFATMACFPNLPGFEYLMQTPEGGHK FSGLPQLLSARQYEDVYVYNGDFAWDNQSGFFSNQGMTTFIGRNDYVDPVFSDPTWGV SDQDMFARGNEELDKLASTGKPFYALLQSLSNHVPYALPKDLPVERVTGYGSLDEHLT AMRYSDWALGQFFEKAKKSPYYKDTLFVVVGDHGFGSPEQLTEMDLHRFNVPLLLIAP GIQEKFGTHLPTVGTQVDIVPTIMGLLGGETVHQCWGRDLLNLPEGDTGFGVIKPSGS EQNVAIVSGNRILVRPKDGDVRVYDYQLGGDAKAVITKEVPDQAELQKKLESFIQTAT KSLLENTAGVVHGIPDKD" misc_feature 1838353..1840308 /locus_tag="PA1689" /note="Phosphoglycerol transferase MdoB/OpgB, AlkP superfamily [Cell wall/membrane/envelope biogenesis]; Region: MdoB; COG1368" /db_xref="CDD:440979" gene complement(1840468..1841517) /gene="pscU" /locus_tag="PA1690" /db_xref="GeneID:879536" CDS complement(1840468..1841517) /gene="pscU" /locus_tag="PA1690" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="translocation protein in type III secretion" /protein_id="NP_250381.1" /db_xref="GeneID:879536" /translation="MSAEKTEQPTAKKLRDARRQGQVVKSKEIVSSALILSLVALLMG FSDYYLEHLGKLLLLPAEYIDLPFRQALETILENLLQELLYLLAPVLLVAALVVVLSH VGQYGFLLSLDSVKPDLKKINPVEGAKKIFSIRSLVEFLKSTLKVALLSLLVWLTLQG NLASLLRIPACGLDCVAPVSGLMLRQLMLVCAVGFLAIAVADYAFERHQHYKQLRMSK DEVKREYKEMEGSPEIKSKRRQFHQELQSSNLRADVRRSSVIVANPTHVAIGIRYRRG ETPLPLVTLKHTDALALRVRRIAEEEGIPVLQRIPLARALLRDGNVDQYIPADLIQAT AEVLRWLESQQTDTP" misc_feature complement(1840489..1841517) /gene="pscU" /locus_tag="PA1690" /note="Type III secretory pathway, EscU/YscU component [Intracellular trafficking, secretion, and vesicular transport]; Region: EscU; COG4792" /db_xref="CDD:443821" gene complement(1841514..1842302) /gene="pscT" /locus_tag="PA1691" /db_xref="GeneID:877821" CDS complement(1841514..1842302) /gene="pscT" /locus_tag="PA1691" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="translocation protein in type III secretion" /protein_id="NP_250382.1" /db_xref="GeneID:877821" /translation="MSVQDLQQLLLTYSLLLPRIISCFVVLPVLAKQTLGGGLVRNGV ACSLALFAYPIVAGSLPPALGALDIALLIGKEVLLGLLIGFVATIPFWAMEATGFIID NQRGAALASTFNPSLGSQTSPTGLLLTQTLITLFFSGGAFLALVGSLFRSYASWPVSS FFPQLGSQWVAFFYAQFSQMLMLCALFAAPLLIAMFLAEFGLALVSRFAPSLNVFILA MPIKSLVASLLLVLYLGILMEHAYDALLLAVDPLRLLRPVLETP" misc_feature complement(1841532..1842251) /gene="pscT" /locus_tag="PA1691" /note="flagellar type III secretion system protein FliR; Region: fliR; cl00734" /db_xref="CDD:469896" gene complement(1842299..1842565) /locus_tag="PA1692" /db_xref="GeneID:878528" CDS complement(1842299..1842565) /locus_tag="PA1692" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="translocation protein in type III secretion" /protein_id="NP_250383.1" /db_xref="GeneID:878528" /translation="MSSADILHFTNQTLWLVLVLSLPPVLVAALIGTLVSLVQALTQI QEQTLGFVAKLVAVVVVLFATSGWLGGELYRFAEMTLLKVPLVR" misc_feature complement(1842302..1842565) /locus_tag="PA1692" /note="Type III secretory pathway, EscS/YscS component [Intracellular trafficking, secretion, and vesicular transport]; Region: EscS; COG4794" /db_xref="CDD:443822" gene complement(1842568..1843221) /gene="pscR" /locus_tag="PA1693" /db_xref="GeneID:879755" CDS complement(1842568..1843221) /gene="pscR" /locus_tag="PA1693" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="type III secretion system protein" /protein_id="NP_250384.1" /db_xref="GeneID:879755" /translation="MIQLPDELGLILGLALLALVPFIAVMATSFIKMTVVFSLLRNAL GVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLRNHDVSLSDSASVERFLDEGMAPY RNFLKRQIQEREHTFFMESTRQVWPSEYAERLDPDSLLILLPAFTVSELTRAFEIGFL IYLPFIAIDLIISNILLAMGMMMVSPMTISLPFKLLLFVLLDGWARLTHGLVISYGG" misc_feature complement(1842577..1843221) /gene="pscR" /locus_tag="PA1693" /note="Type III secretory pathway, EscR/YscR component [Intracellular trafficking, secretion, and vesicular transport]; Region: EscR; COG4790" /db_xref="CDD:443819" gene complement(1843218..1844147) /gene="pscQ" /locus_tag="PA1694" /db_xref="GeneID:883123" CDS complement(1843218..1844147) /gene="pscQ" /locus_tag="PA1694" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="type III secretion system protein" /protein_id="NP_250385.1" /db_xref="GeneID:883123" /translation="MNGADLDLPLASRAELDLQRRLARCRRHYVGNALQARLDIAQAA PDVDLELSLAWDGLPLRFLCQAPALARWLAPNLQEAAFASLPAALQLALLEREGNVFP GLVWYGLSPAQPRAAMGLRLSLERDDQRLALWLDGDPATLLARLPPRPSAQRLAIPLR LSLQWPGLPLDASELRTLEPGDLLLLPAGHRPDAALLGVLEGRPWARCQLHSTQLELL DMHDTPSLADGEDLHELDQLPIPVSFEVGRRTLDLHTLSTLQPGSLLDLDSALDGEVR ILANQRCLGIGELVRLQDRLGVRVTRLFGHDEA" misc_feature complement(1843221..1844141) /gene="pscQ" /locus_tag="PA1694" /note="YscQ/HrcQ family type III secretion apparatus protein; Region: PRK06933" /db_xref="CDD:235891" gene complement(1844144..1845253) /gene="pscP" /locus_tag="PA1695" /db_xref="GeneID:883100" CDS complement(1844144..1845253) /gene="pscP" /locus_tag="PA1695" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="translocation protein in type III secretion" /protein_id="NP_250386.1" /db_xref="GeneID:883100" /translation="MLKLNAVDTAPLVSSDTLAPLPPLRAQQIAFEQALPAHRPPAPR PPFDKGDETTEAAATADAPTSTPLADQPAAPAADRPPTIRQPPMPVAADATPTPTPTP TPTPTPTPTPTPTPTVSPSGSVARQAPAVSARVAASTQAREPASVSAPPVDEPPLVPV SSHPQIAGRTHERPQPGPGFPAKTAAEVAPTAQASVQASPPAPTAGGEGRGEERRQPG ETDPSALPPDDQAPVPLPAMQTPGDRLLARLLASSGSRPLPLADLARLLDAVQGRIQV ASAAESHAARLQVRLPQLGAVEVQVLHGHGQLQIEISASPGSLALLQQARGELLERLQ RLHPEQPVQLTFNQQQDSGQRSRQRRYLHEEWQAE" misc_feature complement(<1844540..>1844857) /gene="pscP" /locus_tag="PA1695" /note="variable surface protein Vir28; Provisional; Region: PTZ00249" /db_xref="CDD:140276" misc_feature complement(1844147..1844536) /gene="pscP" /locus_tag="PA1695" /note="type III secretion system needle length determinant; Region: type_III_yscP; TIGR02514" /db_xref="CDD:274172" gene complement(1845241..1845717) /gene="pscO" /locus_tag="PA1696" /db_xref="GeneID:878091" CDS complement(1845241..1845717) /gene="pscO" /locus_tag="PA1696" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="translocation protein in type III secretion" /protein_id="NP_250387.1" /db_xref="GeneID:878091" /translation="MSLALLLRVRRLRLDRAERAQGRQLLRVRAAAQEHTERQAAQRD YRDWRLAEEQRLFLACQAAMLDRRRLEAWQQQVGLLREKEAGLEQDCAEAAQRLEGER ERLRQCRRELLERQRQLEKFAELERHVDAERQGLRERSEEGELEEFTRHETWPCSS" misc_feature complement(1845268..1845669) /gene="pscO" /locus_tag="PA1696" /note="Type III secretion protein YscO; Region: YscO; pfam07321" /db_xref="CDD:399954" gene complement(1845714..1847036) /locus_tag="PA1697" /db_xref="GeneID:879763" CDS complement(1845714..1847036) /locus_tag="PA1697" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="type III secretion system ATPase" /protein_id="NP_250388.1" /db_xref="GeneID:879763" /translation="MPAPLSPLIVRMRHAIEGCRPIQIRGRVTQVTGTLLKAVVPGVR IGELCQLRNPDQSLALLAEVIGFQQHQALLTPLGEMLGVSSNTEVSPTGGMHRVAVGE HLLGQVLDGLGRPFDGSPPAEPAAWYPVYRDAPQPMSRRLIERPLSLGVRAIDGLLTC GEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGREVREFIESDLGEQGLR RSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREIGLAA GEPPTRRGYPPSVFAALPRLMERAGQSERGSITALYTVLVEGDDMSEPVADETRSILD GHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELLLK IGEYQKGQDSEADRAIEKIGAIRQWLRQGTHETSDYAQACAQLRSLCA" misc_feature complement(1845717..1847033) /locus_tag="PA1697" /note="EscN/YscN/HrcN family type III secretion system ATPase; Region: PRK06936" /db_xref="CDD:180762" gene 1847227..1848093 /gene="popN" /locus_tag="PA1698" /db_xref="GeneID:879266" CDS 1847227..1848093 /gene="popN" /locus_tag="PA1698" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type III secretion outer membrane protein PopN" /protein_id="NP_250389.1" /db_xref="GeneID:879266" /translation="MDILQSSSAAPLAPREAANAPAQQAGGSFQGERVHYVSVSQSLA DAAEELTFAFSERAEKSLAKRRLSDAHARLSEVQAMLQEYWKRIPDLESQQKLEALIA HLGSGQLSSLAQLSAYLEGFSSEISQRFLALSRARDVLAGRPEARAMLALVDQALLRM ADEQGLEIELGLRIEPLAAEASAAGVGDIQALRDTYRDAVLDYRGLSAAWQDIQARFA ATPLERVVAFLQKALSADLDSQSSRLDPVKLERVMSDMHKLRVLGGLAEQVGALWQVL VTGERGHGIRAF" misc_feature 1847314..1848054 /gene="popN" /locus_tag="PA1698" /note="type III secretion regulator YopN/LcrE/InvE/MxiC; Region: LcrE; TIGR02568" /db_xref="CDD:274206" gene 1848074..1848352 /locus_tag="PA1699" /db_xref="GeneID:877934" CDS 1848074..1848352 /locus_tag="PA1699" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250390.1" /db_xref="GeneID:877934" /translation="MAYGPSELTGAVIALLEKRWVGVAEVQALLEPLPLADVARQIHF FRELKRLYRLLPVEVFGDDEQRQNLLNACQMALDLAIEREEEQQHGLG" misc_feature 1848089..1848331 /locus_tag="PA1699" /note="Region: TyeA; pfam09059" /db_xref="CDD:401121" gene 1848339..1848710 /locus_tag="PA1700" /db_xref="GeneID:878424" CDS 1848339..1848710 /locus_tag="PA1700" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250391.1" /db_xref="GeneID:878424" /translation="MDWVELAVAQFCQDLRVSVPAPLARVVQLDFEDSGTLQLERHGE QLSLWLACDLAWHQAYRGTLRALRLCHARAAGSLPLRCAWSGESRLLLCITLEARQVG MPTLHQALQALRSARSEVLAA" misc_feature 1848348..1848704 /locus_tag="PA1700" /note="type III secretion chaperone SycN; Region: type_III_SycN; TIGR02503" /db_xref="CDD:131555" gene 1848707..1849072 /locus_tag="PA1701" /db_xref="GeneID:878430" CDS 1848707..1849072 /locus_tag="PA1701" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250392.1" /db_xref="GeneID:878430" /translation="MSRVGAWHIGIERLDLAHAEPFAPPLPERHLLAPDGRPVETHVA SLYPAQQAQQRLFDYARPQLEFHGLLRPGDFRQALRDLRLALTLPRQPALQAAACLLG ERDEDERLLQMALNLLHKV" misc_feature 1848707..1849069 /locus_tag="PA1701" /note="type III secretion protein, YscX family; Region: type_III_YscX; TIGR02502" /db_xref="CDD:131554" gene 1849077..1849406 /locus_tag="PA1702" /db_xref="GeneID:877803" CDS 1849077..1849406 /locus_tag="PA1702" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250393.1" /db_xref="GeneID:877803" /translation="MTLKPTQQRLLLMLGWLHLQCGQPRRAQVLLEALLSVAPERRDG RRALLLALLQQGLGEPAVRLCRQLQEDGEEEPGLWRCLSRAEQLAGRLDAARAAHARA LELEARE" gene 1849403..1851523 /gene="pcrD" /locus_tag="PA1703" /db_xref="GeneID:878081" CDS 1849403..1851523 /gene="pcrD" /locus_tag="PA1703" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type III secretory apparatus protein PcrD" /protein_id="NP_250394.1" /db_xref="GeneID:878081" /translation="MNDLSGLLGRVGERKDILLVVLLLAVVFMMVLPLPPLLLDILIA VNITISVVLLMMSVYIGSPLQFSVFPAVLLITTLFRLALSVSTTRMILLQADAGQIVN TFGSFVVGGNLVVGIIIFLIITIVQFLVITKGAERVAEVSARFSLDAMPGKQMSIDGD MRAGVIDVNEARARRAVIEKESQMFGSMDGAMKFVKGDAIAGLIIIVVNILGGIAIGV TQKGLSTADALQLYAVLTVGDGMVSQVPALLIAITAGIIVTRVSSDESADLGSDIGEQ VVAQPKALLIGGLLLVLFGLIPGFPTLTFLALALLVGGGGYFMLWRQRAQASAGSRDL PALLAQGAGAPSAKARGKAGGGKPKAGRLAEQEEFALTVPLLIDVDASLQERLEAMSL NEELVRVRRALYLDFGVPFPGIHLRFNEAMGDGEYLVQLQEVPVARGCLRPGWLLVRE RAAQLELLAVPHEPAELQVPGEEASWVEQAHQDRLERSGCACLGLEQVLTWHLSHVLR EYAEDFIGIQETRYLLEQMEQGYGELVKEAQRIVPLQRMTEILQRLVGEDISIRNMRA ILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKYSSGNNILPAYLLDQAVEEQIRGGI RQTSAGSYLALDPAITQAFLERVRQTVGDLAQMQNRPVLIVSMDIRRYVRKLVESDYA GLPVLSYQELTQQINIQPLGRIVL" misc_feature 1849421..1851520 /gene="pcrD" /locus_tag="PA1703" /note="Type III secretory pathway, component EscV [Intracellular trafficking, secretion, and vesicular transport]; Region: EscV; COG4789" /db_xref="CDD:443818" gene 1851520..1851954 /gene="pcrR" /locus_tag="PA1704" /db_xref="GeneID:879260" CDS 1851520..1851954 /gene="pcrR" /locus_tag="PA1704" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator PcrR" /protein_id="NP_250395.1" /db_xref="GeneID:879260" /translation="MSADPLIPWFLARGLAVRPHCLRDTSIALGWQVLAHGCELAWRC DGERVWIVMLRRRQARSGLANPFAALYLLAEATLDTLGPRQRLYGKVLALAGSPLPGE RMARFYRRWTGAAEPADGWFELEAGRVVTQRSLRKRQKPDRA" misc_feature 1851523..1851939 /gene="pcrR" /locus_tag="PA1704" /note="type III secretion system regulator LcrR; Region: LcrR; TIGR02572" /db_xref="CDD:131623" gene 1851982..1852278 /gene="pcrG" /locus_tag="PA1705" /db_xref="GeneID:879383" CDS 1851982..1852278 /gene="pcrG" /locus_tag="PA1705" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type III secretion regulator" /protein_id="NP_250396.1" /db_xref="GeneID:879383" /translation="MGDMNEYTEDTLRATVQAAELAIRDSEERGRLLAEMWQGLGLAA DAGELLFQAPERELARAAEEELLAELRRMRSSQPTQGEQGTRPRRPTPMRGLLI" misc_feature 1852003..1852275 /gene="pcrG" /locus_tag="PA1705" /note="LcrG protein; Region: LcrG; cl23895" /db_xref="CDD:305052" gene 1852288..1853172 /gene="pcrV" /locus_tag="PA1706" /db_xref="GeneID:882997" CDS 1852288..1853172 /gene="pcrV" /locus_tag="PA1706" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type III secretion protein PcrV" /protein_id="NP_250397.1" /db_xref="GeneID:882997" /translation="MEVRNLNAARELFLDELLAASAAPASAEQEELLALLRSERIVLA HAGQPLSEAQVLKALAWLLAANPSAPPGQGLEVLREVLQARRQPGAQWDLREFLVSAY FSLHGRLDEDVIGVYKDVLQTQDGKRKALLDELKALTAELKVYSVIQSQINAALSAKQ GIRIDAGGIDLVDPTLYGYAVGDPRWKDSPEYALLSNLDTFSGKLSIKDFLSGSPKQS GELKGLSDEYPFEKDNNPVGNFATTVSDRSRPLNDKVNEKTTLLNDTSSRYNSAVEAL NRFIQKYDSVLRDILSAI" misc_feature <1852507..1853166 /gene="pcrV" /locus_tag="PA1706" /note="V antigen (LcrV) protein; Region: LcrV; pfam04792" /db_xref="CDD:398456" gene 1853181..1853684 /gene="pcrH" /locus_tag="PA1707" /db_xref="GeneID:879267" CDS 1853181..1853684 /gene="pcrH" /locus_tag="PA1707" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="regulatory protein PcrH" /protein_id="NP_250398.1" /db_xref="GeneID:879267" /translation="MNQPTPSDTDQQQALEAFLRDGGTLAMLRGLSEDTLEQLYALGF NQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN EPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVTARKDR AYESDNA" misc_feature 1853238..1853639 /gene="pcrH" /locus_tag="PA1707" /note="type III secretion low calcium response chaperone LcrH/SycD; Region: LcrH_SycD; TIGR02552" /db_xref="CDD:274197" misc_feature order(1853289..1853291,1853298..1853303,1853310..1853315, 1853319..1853321,1853391..1853393,1853400..1853405, 1853412..1853417,1853421..1853426,1853493..1853495, 1853502..1853507,1853514..1853519,1853526..1853528) /gene="pcrH" /locus_tag="PA1707" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature 1853289..1853372 /gene="pcrH" /locus_tag="PA1707" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 1853385..1853477 /gene="pcrH" /locus_tag="PA1707" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 1853490..1853561 /gene="pcrH" /locus_tag="PA1707" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" gene 1853665..1854837 /gene="popB" /locus_tag="PA1708" /db_xref="GeneID:880867" CDS 1853665..1854837 /gene="popB" /locus_tag="PA1708" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="translocator protein PopB" /protein_id="NP_250399.1" /db_xref="GeneID:880867" /translation="MNPITLERAGLPYGVADAGDIPALGRPVARDVESLRVERLAAPA AASASGTGVALTPPSAASQQRLEVANRAEIASLVQAVGEDVGLARQVVLAGASTLLSA GLMSPQAFEIELAKITGEVENQQKKLKLTEIEQARKQNLQKMEDNQQKIRESEEAAKE AQKSGLAAKIFGWISAIASIIVGAIMVATGVGAAAGALMIAGGVMGVVSQSVQQAAAD GLISKEVMEKLGPALMGIEMAVALLAAVVSFGGSAVGGLARLGAKIGGKAAEMTASLA SKVADLGGKFGSLAGQSLSHSLKLGVQVSDLTLDVANGAAQATHSGFQAKAANRQADV QESRADLTTLQGVIERLKEELSRMLEAFQEIMERIFAMLQAKGETLHNLSSRPAAI" misc_feature 1853743..1854816 /gene="popB" /locus_tag="PA1708" /note="Type III secretion system effector SseC (host membrane pore formation) [Intracellular trafficking, secretion, and vesicular transport]; Region: SseC; COG5613" /db_xref="CDD:444344" gene 1854849..1855736 /gene="popD" /locus_tag="PA1709" /db_xref="GeneID:879358" CDS 1854849..1855736 /gene="popD" /locus_tag="PA1709" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="translocator outer membrane protein PopD" /protein_id="NP_250400.1" /db_xref="GeneID:879358" /translation="MIDTQYSLAATQAAIPSEPIAPGAAGRSVGTPQAAADLPQVPAA RADRVELNAPRQVLDPVRMEAAGSELDSSVELLLILFRIAQKARELGVLQRDNENQSI IHAQKAQVDEMRSGATLMIAMAVIAGVGALASAVVGSLGALKNGKAISQEKTLQKNID GRNELIDAKMQALGKTSDEDRKIVGKVWAADQVQDSVALRAAGRAFESRNGALQVANT VIQSFVQMANASVQVRQGESQASAREGEVNATIGQSQKQKVEDQMSFDAGFMKDVLQL IQQYTQSHNQAWRAAAGVV" misc_feature 1854867..1855733 /gene="popD" /locus_tag="PA1709" /note="YopD protein; Region: YopD; pfam05844" /db_xref="CDD:283498" protein_bind 1855783..1855809 /experiment="'EMSA [PMID: 22408165, 18373522]'" /experiment="Beta-gal reporter assay [PMID: 22408165]" /experiment="DNAse footprinting [PMID: 18373522]" /experiment="Site directed mutagenesis [PMID: 22408165]" /note="Transcription factor binding site for NP_250404.; Evidence of regulation for: PA1710" /bound_moiety="ExsA" gene 1855862..1856299 /gene="exsC" /locus_tag="PA1710" /db_xref="GeneID:878452" CDS 1855862..1856299 /gene="exsC" /locus_tag="PA1710" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="exoenzyme S synthesis protein ExsC" /protein_id="NP_250401.1" /db_xref="GeneID:878452" /translation="MDLTSKVNRLLAEFAGRIGLPSLSLDEEGMASLLFDEQVGVTLL LLAERERLLLEADVAGIDVLGEGIFRQLASFNRHWHRFDLHFGFDELTGKVQLYAQIL AAQLTLECFEATLANLLDHAEFWQRLLPCDSDREAVAAVGMRV" misc_feature 1855883..1856260 /gene="exsC" /locus_tag="PA1710" /note="Class IA type III secretion system chaperone protein, similar to Pseudomonas aeruginosa exoenzyme S synthesis protein C (ExsC); Region: T3SC_IA_ExsC-like; cd17018" /db_xref="CDD:409302" misc_feature order(1855886..1855888,1855895..1855903,1855910..1855924, 1855928..1855933,1855949..1855972,1855991..1855993, 1856006..1856008,1856024..1856026,1856084..1856086, 1856093..1856095,1856099..1856104,1856105..1856107, 1856132..1856137,1856195..1856197,1856207..1856209, 1856216..1856224,1856228..1856236,1856240..1856245, 1856249..1856260) /gene="exsC" /locus_tag="PA1710" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:409302" misc_feature order(1855997..1855999,1856006..1856008,1856012..1856014, 1856018..1856020,1856024..1856026,1856042..1856044, 1856066..1856071,1856078..1856083,1856087..1856092, 1856096..1856104,1856108..1856110,1856114..1856131, 1856147..1856149,1856153..1856161,1856165..1856167, 1856174..1856176) /gene="exsC" /locus_tag="PA1710" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:409302" gene 1856308..1856553 /locus_tag="PA1711" /db_xref="GeneID:880941" CDS 1856308..1856553 /locus_tag="PA1711" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250402.1" /db_xref="GeneID:880941" /translation="MKIESISPVQPSQDAGAEAVGHFEGRSVTRAAVRGEDRSSVAGL ARWLARNVAGDPRSEQALQRLADGDGTPLEARTVRRR" misc_feature 1856308..1856547 /locus_tag="PA1711" /note="T3SS regulon translocated regulator ExsE family protein; Region: ExsE_fam; NF033906" /db_xref="CDD:411467" gene 1856562..1856975 /gene="exsB" /locus_tag="PA1712" /db_xref="GeneID:878557" CDS 1856562..1856975 /gene="exsB" /locus_tag="PA1712" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="exoenzyme S synthesis protein ExsB" /protein_id="NP_250403.1" /db_xref="GeneID:878557" /translation="MLLPLALLLGGCVSQPAPMSPKVTVGGSVGGVSLQARQAQLRLR LYAVVQGRMQTIAERRYRVSGLPLRYAFDLEVDRLEGEALYLRTELSWVGVAAVQASA WQQVAAGVDERVRLVRRDCFPNCTAARPEERSGND" misc_feature 1856589..1856936 /gene="exsB" /locus_tag="PA1712" /note="Type III secretion system lipoprotein chaperone (YscW); Region: YscW; cl15825" /db_xref="CDD:449594" gene 1857273..1858109 /gene="exsA" /locus_tag="PA1713" /db_xref="GeneID:879712" CDS 1857273..1858109 /gene="exsA" /locus_tag="PA1713" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="exoenzyme S transcriptional regulator ExsA" /protein_id="NP_250404.1" /db_xref="GeneID:879712" /translation="MQGAKSLGRKQITSCHWNIPTFEYRVNKEEGVYVLLEGELTVQD IDSTFCLAPGELLFVRRGSYVVSTKGKDSRILWIPLSAQFLQGFVQRFGALLSEVERC DEPVPGIIAFAATPLLAGCVKGLKELLVHEHPPMLACLKIEELLMLFAFSPQGPLLMS VLRQLSNRHVERLQLFMEKHYLNEWKLSDFSREFGMGLTTFKELFGSVYGVSPRAWIS ERRILYAHQLLLNSDMSIVDIAMEAGFSSQSYFTQSYRRRFGCTPSRSRQGKDECRAK NN" misc_feature <1857333..1857506 /gene="exsA" /locus_tag="PA1713" /note="Ethanolamine utilization protein EutQ, cupin superfamily (function unknown) [Amino acid transport and metabolism]; Region: EutQ; COG4766" /db_xref="CDD:443798" misc_feature <1857486..1858079 /gene="exsA" /locus_tag="PA1713" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" misc_feature 1857822..1858073 /gene="exsA" /locus_tag="PA1713" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" protein_bind 1858096..1858122 /experiment="DNAse footprinting [PMID: 18373522]" /experiment="EMSA [PMID: 18373522]" /note="Transcription factor binding site for NP_250404." /bound_moiety="ExsA" gene 1858207..1859037 /gene="exsD" /locus_tag="PA1714" /db_xref="GeneID:880880" CDS 1858207..1859037 /gene="exsD" /locus_tag="PA1714" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250405.1" /db_xref="GeneID:880880" /translation="MEQEDDKQYSREAVFAGRRVSVVGSDARSRGRVPGYASSSLYRE SGIISARQLALLQRMLPRLRLEQLFRCEWLQQRLARGLALGREEVRQILLCAAQDDDG WCSELGDRVNLAVPQSMIDWVLLPVYGWWESLLDQAIPGWRLSLVELETQSRQLRVKS EFWSRVAELEPEQAREELARVAKCQARTQEQVAELAGKLETASALAKSAWPNWQRGMA TLLASGGLAGFEPIPEVLECLWQPLCRLDDDVGAADAVQAWLHERNLCQAQDHFYWQS " misc_feature 1858330..1859028 /gene="exsD" /locus_tag="PA1714" /note="Antiactivator protein ExsD; Region: ExsD; pfam16806" /db_xref="CDD:435593" gene 1859071..1859493 /gene="pscB" /locus_tag="PA1715" /db_xref="GeneID:879568" CDS 1859071..1859493 /gene="pscB" /locus_tag="PA1715" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type III export apparatus protein" /protein_id="NP_250406.1" /db_xref="GeneID:879568" /translation="MDHLLSGLATRLGQGPFVADRTGSYHLRIDGQSVLLLRQGDDLL LESPLEHAPLDPQRDQQGLLRALLSRVASWSRRYPQAIVLDADGRLLLQARLGLDGLD PERLERALAAQVGLLEALAPELEPLPRGLPPQAPVWRP" misc_feature 1859074..1859487 /gene="pscB" /locus_tag="PA1715" /note="type III secretion system chaperone, YscB family; Region: type_III_yscB; TIGR02513" /db_xref="CDD:131565" gene 1859493..1861295 /gene="pscC" /locus_tag="PA1716" /db_xref="GeneID:881978" CDS 1859493..1861295 /gene="pscC" /locus_tag="PA1716" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type III secretion outer membrane protein PscC" /protein_id="NP_250407.1" /db_xref="GeneID:881978" /translation="MRRLLIGGLLALLPGAVLRAQPLDWPSLPYDYVAQGESLRDVLA NFGANYDASVIVSDKVNDQVSGRFDLESPQAFLQLMASLYNLGWYYDGTVLYVFKTTE MQSRLVRLEQVGEAELKRALTAAGIWEARFGWRADPSGRLVHVSGPGRYLELVEQTAQ VLEQQYTLRSEKTGDLSVEIFPLRYAVAEDRKIEYRDDEIEAPGIASILSRVLSDANV VAVGDEPGKLRPGPQSSHAVVQAEPSLNAVVVRDHKDRLPMYRRLIEALDRPSARIEV GLSIIDINAENLAQLGVDWSAGIRLGNNKSIQIRTTGQDSEEGGGAGNGAVGSLVDSR GLDFLLAKVTLLQSQGQAQIGSRPTLLTQENTQAVLDQSETYYVRVTGERVAELKAIT YGTMLKMTPRVVTLGDTPEISLSLHIEDGSQKPNSAGLDKIPTINRTVIDTIARVGHG QSLLIGGIYRDELSQSQRKVPWLGDIPYLGALFRTTADTVRRSVRLFLIEPRLIDDGV GHYLALNNRRDLRGGLLEIDELSNQSLSLRKLLGSARCQALAPARAEQERLRQAGQGS FLTPCRMGAQEGWRVTDGACPKDGAWCVGAERGN" misc_feature 1859577..1861010 /gene="pscC" /locus_tag="PA1716" /note="type III secretion outer membrane pore, YscC/HrcC family; Region: type_III_yscC; TIGR02516" /db_xref="CDD:274174" gene 1861297..1862595 /gene="pscD" /locus_tag="PA1717" /db_xref="GeneID:877924" CDS 1861297..1862595 /gene="pscD" /locus_tag="PA1717" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type III export protein PscD" /protein_id="NP_250408.1" /db_xref="GeneID:877924" /translation="MAWKIRFYSGLNQGAEVSLGEGRVALGSDPLQADLVLLDEGIAA VHLVLEVDAQGVRLLEWAEGCEPRQDGQAQVAGAILQALAGQTCGPLRWAFCDPQRSF PERFPEAEVQTAPVRRKSSARAGGAWLLGVSLALALCLLGMLVEPWSARQHGMAGEEP LAKVRAYLREQGMSEVDVQRQGDSLLLGGYLEDNARRLALQRYLDGSGVDYRLEARSM EDIRQGVDFILQKFGYRQILSSNADKPGWVRLNGELAEQDERWARIDALLESEVPGLL GVENQVRVAGSHLRRLERLLADAGLDRQLSFRERGERIELSGTLDEVQLSAFYRLQRE FQQEFGNRPSLVLLSRGKRASGDELEFTIRSVSLGRVPYVVLGDGQKYPVGASTSRGV RILAIEPESILVARGKQRFIINLKGEVLHDDSLGNATVGR" misc_feature 1861306..1861584 /gene="pscD" /locus_tag="PA1717" /note="forkhead associated (FHA) domain superfamily; Region: FHA; cl00062" /db_xref="CDD:469597" misc_feature order(1861375..1861380,1861423..1861428,1861432..1861434, 1861483..1861485,1861492..1861494) /gene="pscD" /locus_tag="PA1717" /note="phosphopeptide binding site [polypeptide binding]; other site" /db_xref="CDD:438714" misc_feature 1861786..1862541 /gene="pscD" /locus_tag="PA1717" /note="Inner membrane component of T3SS, periplasmic domain; Region: Yop-YscD_ppl; cl27782" /db_xref="CDD:355678" gene 1862558..1862761 /gene="pscE" /locus_tag="PA1718" /db_xref="GeneID:881908" CDS 1862558..1862761 /gene="pscE" /locus_tag="PA1718" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type III export protein PscE" /protein_id="NP_250409.1" /db_xref="GeneID:881908" /translation="MMTALETRLSVADGTHAAALRQRLQAALAECRRELARGACPEHF QFLQQQARALEGGLGILSQLTED" misc_feature 1862561..1862758 /gene="pscE" /locus_tag="PA1718" /note="type III secretion system protein, YseE family; Region: type_III_yscE; TIGR02501" /db_xref="CDD:274167" gene 1862764..1863021 /gene="pscF" /locus_tag="PA1719" /db_xref="GeneID:879634" CDS 1862764..1863021 /gene="pscF" /locus_tag="PA1719" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type III export protein PscF" /protein_id="NP_250410.1" /db_xref="GeneID:879634" /translation="MAQIFNPNPGNTLDTVANALKEQANAANKDVNDAIKALQGTDNA DNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQKI" misc_feature 1862809..1863015 /gene="pscF" /locus_tag="PA1719" /note="Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF; Region: T3SS_needle_F; pfam09392" /db_xref="CDD:430579" gene 1863024..1863371 /gene="pscG" /locus_tag="PA1720" /db_xref="GeneID:881982" CDS 1863024..1863371 /gene="pscG" /locus_tag="PA1720" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="type III export protein PscG" /protein_id="NP_250411.1" /db_xref="GeneID:881982" /translation="MDTSLIRELAELALAGSGQHCHEEALCIAEWLERLGQDEAARLI RISSLANQGRYQEALAFAHGNPWPALEPWFALCEWHLGLGAALDRRLAGLGGSSDPAL ADFAAGMRAQVRT" misc_feature 1863024..1863368 /gene="pscG" /locus_tag="PA1720" /note="Bacterial type II secretion system chaperone protein (type_III_yscG); Region: Type_III_YscG; pfam09477" /db_xref="CDD:401433" gene 1863368..1863799 /gene="pscH" /locus_tag="PA1721" /db_xref="GeneID:880612" CDS 1863368..1863799 /gene="pscH" /locus_tag="PA1721" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type III export protein PscH" /protein_id="NP_250412.1" /db_xref="GeneID:880612" /translation="MSRIDTPPGFAVYPSASPKAANLPAVDQVLAFEQALGGEPPAAG RRLAGLENGALGERLLQRFAQPLQGLEADRLELKAMLRAELPLGRQQQTFLLQLLGAV EHAPGGEYLAQLARRELQVLIPLNGMLDNLVRNSHKLDLES" misc_feature 1863410..1863790 /gene="pscH" /locus_tag="PA1721" /note="YopR, type III needle-polymerization regulator; Region: T3SS_needle_reg; cl07585" /db_xref="CDD:298396" gene 1863799..1864137 /gene="pscI" /locus_tag="PA1722" /db_xref="GeneID:879567" CDS 1863799..1864137 /gene="pscI" /locus_tag="PA1722" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type III export protein PscI" /protein_id="NP_250413.1" /db_xref="GeneID:879567" /translation="MDISRMGAQAQITSLEELSGGPAGAAHVAEFERAMGGAGSLGGD LLSELGQIRERFSQAKQELQMELSTPGDDPNSLMQMQWSLMRITMQEELIAKTVGRMS QNVETLMKTQ" misc_feature 1863874..1864134 /gene="pscI" /locus_tag="PA1722" /note="Type III secretion basal body protein I, YscI, HrpB, PscI; Region: T3SS_basalb_I; pfam17001" /db_xref="CDD:407204" gene 1864134..1864880 /gene="pscJ" /locus_tag="PA1723" /db_xref="GeneID:881901" CDS 1864134..1864880 /gene="pscJ" /locus_tag="PA1723" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type III export protein PscJ" /protein_id="NP_250414.1" /db_xref="GeneID:881901" /translation="MRRTVKGLSRMALLALVLALGGCKVELYTGISQKEGNEMLALLR SEGVSADKQADKDGTVRLLVEESDIAEAVEVLKRKGYPRENFSTLKDVFPKDGLISSP IEERARLNYAKAQEISHTLSEIDGVLVARVHVVLPEERDGLGRKSSPASASVFIKHAA DVQLDAYVPQIKQLVNNGIEGLSYDRISVVLVPSAGVRQVPLAPRFESVFSIQVAEHS RGRLLGLFGLLLALLLASNLAQFFWHRQRG" misc_feature 1864197..1864760 /gene="pscJ" /locus_tag="PA1723" /note="Type III secretory pathway, lipoprotein EscJ [Intracellular trafficking, secretion, and vesicular transport]; Region: EscJ; COG4669" /db_xref="CDD:443706" gene 1864889..1865515 /gene="pscK" /locus_tag="PA1724" /db_xref="GeneID:880809" CDS 1864889..1865515 /gene="pscK" /locus_tag="PA1724" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type III export protein PscK" /protein_id="NP_250415.1" /db_xref="GeneID:880809" /translation="MPLTAYQLRFCPARYIHESHLPAVLLRLLPALPDWRRQSVLNAW LLEQLELDCAFRMPAQLGGLALYPQAALERTLGWLGALLHGQALRQVLDGARVRRIRA QIGEQGQRFCLEQLDLLIGRWPPGWQRALPENPEEGYFRRCGLAFWLAACSDADCGFS RRLRLRLRLEAMPAPADWTFDEQRRSLARTLCLKVARQASDECFHLLN" misc_feature 1864892..1865512 /gene="pscK" /locus_tag="PA1724" /note="YOP proteins translocation protein K (YscK); Region: YscK; pfam06578" /db_xref="CDD:461951" gene 1865494..1866138 /gene="pscL" /locus_tag="PA1725" /db_xref="GeneID:880738" CDS 1865494..1866138 /gene="pscL" /locus_tag="PA1725" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type III secretion system protein" /protein_id="NP_250416.1" /db_xref="GeneID:880738" /translation="MLPFVELDASRVRLAPGQALLRARDYQDYLSANRLVEAARERAA EIEREAHEVYQEQKRLGWEAGLEEARLRQAGLIQETLLRCNRYYRQVDRQLGEVVLQA VRKVLRHYDAVELTLAATREALALVSNQKQVILHVQPEQLAAVREQVARVLKDFPEVG YLEVVGDARLDQGGCILETEIGIIDASLDSQLAALQAALTESVARSGEEEGDAG" misc_feature 1865494..1866105 /gene="pscL" /locus_tag="PA1725" /note="HrpE/YscL family type III secretion apparatus protein; Region: PRK06937" /db_xref="CDD:180763" protein_bind complement(1865826..1865838) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1725" /bound_moiety="AmrZ" gene complement(1866241..1868535) /gene="bglX" /locus_tag="PA1726" /db_xref="GeneID:877660" CDS complement(1866241..1868535) /gene="bglX" /locus_tag="PA1726" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="beta-glucosidase" /protein_id="NP_250417.1" /db_xref="GeneID:877660" /translation="MNRLCVLGLLIGLSGSPALAAGQGESGNPPATDKERFIASLMAR MSNAEKIGQLRLVSVGADHPKEALMADIRAGKVGAIFNTVTRPDIRAMQDQVRHSRLK IPLFHAYDVAHGHRTIFPISLGLAASWDPEVVARSARISALEASADGLDMSFSPMVDI TRDARWGRVSEGFGEDTYLTSLLSGVMVRAYQGSNLAAPDSIMAAVKHFALYGAAEGG RDYNTVDMSLPRMFQDYLPPYKAAVDAGAGAVMVSLNTINGVPATANRWLLTDLLRQQ WGFKGLTISDHGAVKELIKHGLAGNERDATRLAIQAGVDMNMNDDLYSTWLPKLLAAG EIDQADIDRACRDVLAAKYDLGLFADPYRRLGKPDDPPFDTNAESRLHRQAAREVARE GLVLLKNRDGLLPLKKQGRIAVIGPLAKSQRDVIGSWSAAGVPRQAVTVYQGLANAVG ERATLLYAKGANVSGDQAILDYLNSYNPEVEVDPRSAEAMLEEALRTARDADLVVAVV GESQGMAHEASSRTDLRIPASQRRLLKALKATGKPLVLVLMNGRPLSLGWEQENADAI LETWFSGTEGGNAIADVLFGEHNPSGKLTMSFPRSVGQVPVYYNHLNTGRPMDHDNPG KYTSRYFDEANGPLYPFGYGLSYTEFSLSPLRLSSERLARGATLEARVTLSNSGKRAG ATVVQLYLQDPVASLSRPVKELRGFRKVMLEPGESREIVFRLGEADLKFYDSQLRHTA EPGEFKVFVGLDSAQTESRSFTLL" misc_feature complement(1866244..1868535) /gene="bglX" /locus_tag="PA1726" /note="beta-glucosidase BglX; Region: PRK15098" /db_xref="CDD:185053" gene complement(1868706..1870763) /gene="mucR" /locus_tag="PA1727" /db_xref="GeneID:881914" /db_xref="PseudoCap:PA1727" CDS complement(1868706..1870763) /gene="mucR" /locus_tag="PA1727" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="signaling protein" /protein_id="NP_250418.1" /db_xref="GeneID:881914" /db_xref="PseudoCap:PA1727" /translation="MLISSYNQVLVAFSLIVAILASYTALDMAGRVTLAKGREALSWL IGGAFAMGFGIWSMHFVGMLAFSLPIPLGYDLGLTLLSLLLAVGSSAFALWLVCQAEL PWQRLALGALLMGSGIAAMHYTGMAALLMMPGIVYDPLWLGLSILIAVIASGAALWIA FRLRHGSRRIVLVRAGAALVMGCAIVGMHYTGMAAAQFPLGSFCGAAGRGIDNGWLAV LVIVITLAVIAIALIVSVLDSRLEARTSVLATSLARANRELIQLALHDNLTKLPNRML LDDRLEQAIQQAIRDDRRFAVLFMDLDGFKAVNDAYGHHLGDLLLIEVAERIRANVRA QDTIARLGGDEFVLLIEAREPADAATLAEKLVKRISQPYQISRHEVRISASIGIALYP GDGQTRHELMINADAAMYHAKDQGRNGYCFFESSMNANAQEQLQLLHDLRQALERRQL VLHYQPKVLAPNGPMIGVEALLRWEHPQHGLITPGQFLPLAEKTGLIVQIGEWVLDEA CRQMRLWLDGGHADWNIAVNLSALQFAHAGLVDSVRNALLRHSLEPSHLILEVTESTA MRDADASLVILEQLSAMGVGISIDDFGTGYSSLLYLKRLPASELKIDRGFINELAHDS DDAAIVSAIVALGRTLNLKIVAEGVETEAQQEFLTRLGCNSLQGFLLGRPMPAEQLLA SVA" misc_feature complement(1868718..1870748) /gene="mucR" /locus_tag="PA1727" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" gene 1871116..1871457 /locus_tag="PA1728" /db_xref="GeneID:879468" CDS 1871116..1871457 /locus_tag="PA1728" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250419.1" /db_xref="GeneID:879468" /translation="MEKPFSDDVSVNVLRRMKEGGFDFARIHPIDFFAIFPSEREARQ AAGQFRGESLRAQVVARDDGSWNLQVSKVMYATHAAIGAFEHDLEEVVVPLGGVLDGW GVTQEVTSLRP" misc_feature 1871134..1871421 /locus_tag="PA1728" /note="Regulator of ribonuclease activity B; Region: RraB; pfam06877" /db_xref="CDD:429168" gene 1871555..1872202 /locus_tag="PA1729" /db_xref="GeneID:877965" CDS 1871555..1872202 /locus_tag="PA1729" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250420.1" /db_xref="GeneID:877965" /translation="MSDILILTHAEFCPPGHLGAVLAERGLDFRVIRADLGELAGLDA ERPRAVAIMGGPMSVNDDLPWLRDELALLRRFIERRIPLIGHCLGGQLLARALGATVR HQPYTEMGWQPMQRESRDSPWLAGLPERFSIFQWHGDAFDLPQGAERLLSSPWCENQG FSWGGHVLGLQGHPEMTEELVRRWIAGWPHLLDPSQPSQQSARTCWPGCLPGLPG" misc_feature 1871564..1872163 /locus_tag="PA1729" /note="GMP synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism]; Region: GuaA1; COG0518" /db_xref="CDD:440284" gene 1872602..1874014 /locus_tag="PA1730" /db_xref="GeneID:880906" CDS 1872602..1874014 /locus_tag="PA1730" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250421.1" /db_xref="GeneID:880906" /translation="MARMFYDEMHDAGGECRSHYREFARWLADTPEEQLLQRRREADL LFHRAGITFTLYGDEQGTERLIPFDTIPRSIPAAEWAHIEAGCIQRVQALNLFLADLY HEQRILKAGVIPAEQVLANDQYQLAMQGLDLPGNVYAHIAGVDLVRDGSGNYYVLEDN LRTPSGVSYMLENRKMMMRLFPELFVRQRVAPIDHYPDLLLDTLKRASDVESPSVVVL TPGRFNSAYFEHAFLAREMGVELVEGADLFVRDERVYMRTTAGPQPVDVIYRRIDDAF LDPLAFNPDSLLGVPGLLAAYRAGNLVLANAIGTGVADDKSIYPYVPDMIRFYLGEDP LLHNVPTWQCRKPKELAHVLAHLPELVVKETQGSGGYGMLVGPAASREEIELFRERLK ARPEAYIAQPTLSLSTCPTFVESGVAPRHIDLRPFVLSAPDRVRLVPGGLTRVALREG SLVVNSSQGGGTKDTWVVEE" misc_feature 1872614..>1874011 /locus_tag="PA1730" /note="Circularly permuted ATP-grasp protein [General function prediction only]; Region: COG2308" /db_xref="CDD:441882" gene 1874017..1874970 /locus_tag="PA1731" /db_xref="GeneID:877719" CDS 1874017..1874970 /locus_tag="PA1731" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250422.1" /db_xref="GeneID:877719" /translation="MLSRTASDLYWMSRYLERAENLARMLDVSYSLSLLPQDRNGGGL DELAMPLLITGTLDAYLERHGELAAERLLSFFALDPDNPASIYSCLAAARASAHAVRG RITLDMWENINATWLEMRGIAAEGILRYGISRFCEWVKDRSHLFRGATFATSMRNDAF RFIRLGTFIERADNTLRLLDARYQTQGEAALAGADEGTARGYYQWSALLRALSAFEGY TELYRASPNARNIAELLLLREDVPRSLLSCIEELSEILSGLPGVNGRPAQRLAAELEA RVRYTGIDEVLEQGLHTWITDYILLVRQLANAIHSSYLEAA" misc_feature 1874017..1874967 /locus_tag="PA1731" /note="Uncharacterized conserved protein, Alpha-E superfamily [Function unknown]; Region: Alpha-E; COG2307" /db_xref="CDD:441881" gene 1874967..1875767 /locus_tag="PA1732" /db_xref="GeneID:878043" CDS 1874967..1875767 /locus_tag="PA1732" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250423.1" /db_xref="GeneID:878043" /translation="MRLSITHDTTYRYEDRVRASIQYLRLTPQDSERQHVVDWRLDLP RPARPLRDPYGNILHVLTLDEPHESVLIAAHGLVEIDEEREVEHDRQSPLPFLRSTRL TGADAEMRAFAERAMGGRKDRGGLLDLMHALHEHILYQPGATRVDSTAIEAFGARAGV CQDHAHAFLACVRSQGVPGRYVSGYLYTEDDTHLASHAWAEAWLGDGWYSFDVTNRLG RPERHLKLAVGLDYLDACPVRGLRRGGGCEQMHARVLVSVPLLQVQQQ" misc_feature 1874973..1875203 /locus_tag="PA1732" /note="Bacterial transglutaminase-like N-terminal region; Region: Bact_transglu_N; pfam08379" /db_xref="CDD:462455" misc_feature <1875231..1875608 /locus_tag="PA1732" /note="Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]; Region: YebA; COG1305" /db_xref="CDD:440916" gene 1875849..1876580 /locus_tag="PA1733" /db_xref="GeneID:878193" CDS 1875849..1876580 /locus_tag="PA1733" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250424.1" /db_xref="GeneID:878193" /translation="MTYCVAMHLADGLVFASDSRTNAGIDHIATFRKLFTFGTPGERL LVVQTAGNLATSQSVINLLQQRIRRDGASLLNVPSVYDATALVAETTREVLARDSGNL AGNTDLSCSFLVGGQIAGGPPALYSIYPQGNFIQATPDTPFLQLGESKYGKPILDRNL TFDTPLEQALRCALVSFDSTIRSNLSVGMPLDLLVYHRDSLILPEGYRVTEDDAYFSA IRRQWSAGLHDLLERLPSPPSAYNI" misc_feature 1875852..1876553 /locus_tag="PA1733" /note="Predicted proteasome-type protease [Posttranslational modification, protein turnover, chaperones]; Region: COG3484" /db_xref="CDD:442707" gene complement(1876588..1877409) /locus_tag="PA1734" /db_xref="GeneID:877587" CDS complement(1876588..1877409) /locus_tag="PA1734" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250425.1" /db_xref="GeneID:877587" /translation="MPVTLPRLALLGALLFPVAAAWAAELRLELPGGTQTWSSEELLR HPQARDLDIPADVAYRRNMRYRAVPLAALLKGVHPEDHLQAVASDGFAAELPAAPLLA EQGSQAWLAIEDPQRPWPPLGAGKPSAGPFYLVWSKPEEKRIGPEQWPFQVVRIRYQS PLAERFPALLPAADASAEVRAGFAVFQKNCLACHRLNGAGDAQFGPDLNLPYNPTEYF QPQFLARYIRDPQALRQWPQAKMPAFPERVIDDQELRQLIGYLRHMAGRKAGAAG" misc_feature complement(1876609..1877142) /locus_tag="PA1734" /note="Cytochrome c, mono- and diheme variants [Energy production and conversion]; Region: CccA; COG2010" /db_xref="CDD:441613" misc_feature complement(1876618..1876869) /locus_tag="PA1734" /note="Cytochrome c; Region: Cytochrom_C; pfam00034" /db_xref="CDD:459641" gene 1877522..1878409 /locus_tag="PA1735" /db_xref="GeneID:879718" CDS 1877522..1878409 /locus_tag="PA1735" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250426.1" /db_xref="GeneID:879718" /translation="MLAELFAVMAPVLFGAGVGYVWVRLGHAYPTEFVSRIVFNIGSP CLILATLAHTRVDLHSFGRMALASALICVCMAALGWAAARLGRQEWQVLVPAYSFPNV GNMGLPVCLYAFGEAGMTLAVAFYLIMSIGNFSLGVFWMSGERSWRSLLGNPILLSVL LALLLMGLDLQLPRWMANTVDLMAGLTIPLMLITLGVSLASIRPRQLGNGFFYGGLRL LLGALVGWSVALALQLPPLAQGVLVVQSSMPVAVFNYLYALRGNRSPDQVASLVLCST LLSFAFIPLLLTWWLPALR" misc_feature 1877525..1878397 /locus_tag="PA1735" /note="Predicted permease, AEC (auxin efflux carrier) family [General function prediction only]; Region: YfdV; COG0679" /db_xref="CDD:440443" protein_bind complement(1878832..1878844) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1736" /bound_moiety="AmrZ" gene 1878980..1880185 /locus_tag="PA1736" /db_xref="GeneID:879646" CDS 1878980..1880185 /locus_tag="PA1736" /EC_number="2.3.1.9" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyl-CoA acetyltransferase" /protein_id="NP_250427.1" /db_xref="GeneID:879646" /translation="MTDAFIYDAVRTPRGKGKKDGALHSVKPVNLMAGLLRAVQRRND LDTAQVDDIVLGCVTPVGDQGADIAKTAALVADWDEQVAGVQINRFCASGLEAVNLGA MKVRSGFEDLVLVGGVESMSRVPMGSDGGAWALDPETNLHTSFVPQGIGADLIATLEG FSRADVDAFALRSQQKAAKARAEGLFGKSLVPVADQNGIVLLDHDEFIRADSTLEGLA ALKPSFEMMGQMGFDATALRKYSQVERIEHVHTPGNSSGIVDGASAMLIGSEAKGREL GLKARARIVATAVTSTDPTIMLTGPAPATRKALAKAGLKVEDIDLFEVNEAFASVVMK FMKDMGVAESKVNVNGGAIAMGHPLGATGCIILGTLLDELERRNLRYGLATLCVGGGM GIATIIERV" misc_feature 1878980..1880182 /locus_tag="PA1736" /note="acetyl-CoA C-acetyltransferase; Region: PRK08242" /db_xref="CDD:236197" gene 1880199..1882343 /locus_tag="PA1737" /db_xref="GeneID:878600" CDS 1880199..1882343 /locus_tag="PA1737" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="3-hydroxyacyl-CoA dehydrogenase" /protein_id="NP_250428.1" /db_xref="GeneID:878600" /translation="MTDAIRYEKGQDNVVVLTMDMPGQSANTMNGVYREAMAKTIARL EAEKEGIAGVVLTSAKKTFFAGGDLNELIKVTKADAPAFYQGILELKGQLRRLETLGK PVVAAINGAALGGGWEICLACHHRIALDNPGVQLGLPEVTLGLLPGGGGIVRMVRLLG LEKALPYLAEGKKVRPAEALKAGLIHELADSPEEMLEKARAWILANPAAKQPWDSAGY KIPGGTPASPNVAQMLAIAPSVLRDKTKGCFPAPEKIMCAAVEGAQVDFDTAQLIEAR YFTELTTGQVAKNMIGTFWFQLNEINAGKSRPQGYPVRATKKVGVLGAGMMGAGIAYV SAAAGIEVVLKDVSLEAAEKGKAYSARLLDKKVARGHLSAEKRDAFLARIVPSVSEAD FEGCDLIIEAVFEDRALKGKVTAEAEKHALADAVVASNTSTLPITGLAQAVARPEKFI GLHFFSPVDKMPLVEIIRGEKTSDETLARGFDYVLQIKKTPIVVNDSRGFFTSRVFGT FTNEGIAMLGEGVSAAMIDNQARQAGMPVGPLAISDEVSLSLMTHIRNQTARDLEAEG KALPTHPAFAVIDLMVNEYKRPGKAAGAGFYDYPANGRKHLWAELKSRFEKPDAQISA EDVRDRLLFIQAIETVRCVEEGVLHSTADANIGSIFGIGFAAWSGGALQFINQYGLKD FIARAQYLVEQYGERFEPPALLLEKAAKGELF" misc_feature 1880199..1882340 /locus_tag="PA1737" /note="fatty acid oxidation complex subunit alpha FadJ; Region: fadJ; PRK11154" /db_xref="CDD:236864" gene complement(1882595..1883509) /locus_tag="PA1738" /db_xref="GeneID:882035" CDS complement(1882595..1883509) /locus_tag="PA1738" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250429.1" /db_xref="GeneID:882035" /translation="MKKPDLAGLAAFVAIARERSFRRAAATLGVTPPTLSHTLRELET QLGIRLLNRTTRNVSPTEAGEHLLAHLDPAFEDIAAALDSLNRFRETPHGLVRINAPR NAIGLVLAPRFGELARDYPGITLEVVADEGFANIVEAGFDAGIRLGEDLQHGMRAVRV GPDLRLAIVATPAYFRRQGRPGSPEELLGHRCIGWRKVSSGELYKWQFSKGTKALSVA MSGPLVLDDPRLMLQAALADVGIAFAIEEEVAEHLAAGRLERVLADWCAPFPGFHLYY PNRRNHPAALSAVINLLRYPGEEHPGPA" misc_feature complement(1883315..1883485) /locus_tag="PA1738" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(1882631..1883236) /locus_tag="PA1738" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold; Region: PBP2_CrgA_like_5; cd08474" /db_xref="CDD:176163" misc_feature complement(order(1882694..1882696,1882775..1882777, 1882826..1882828,1883018..1883020,1883027..1883029, 1883069..1883071,1883186..1883188,1883198..1883200)) /locus_tag="PA1738" /note="putative effector binding pocket [active]" /db_xref="CDD:176163" misc_feature complement(order(1882799..1882801,1882808..1882813, 1882832..1882846,1882937..1882939,1883123..1883143, 1883147..1883149,1883159..1883161,1883168..1883173, 1883177..1883182,1883192..1883197)) /locus_tag="PA1738" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176163" protein_bind 1883562..1883574 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1738" /bound_moiety="AmrZ" gene 1883661..1884632 /locus_tag="PA1739" /db_xref="GeneID:882050" CDS 1883661..1884632 /locus_tag="PA1739" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_250430.1" /db_xref="GeneID:882050" /translation="MQHVRLGNSGLKVSRLCLGCMTYGDPAWRPWVLDEERARPFIRE ALEAGIDFFDSADIYSTGESERILGRALRDFAQREDLVIATKAFFPMSDRPNACGLSR KHLLASVDASLRRLGTDYLDLFVIHRFDPDTPIEETCETLDSLVRVGKVRYLGASSMP AWRFMKMLAFQRHHGLAQFISMQSQYNLIVREDEEDLVPLCREEGIALTPWSPLARGL LAGARSAGTLRTRTDEQAPRWYGGREEVESTLGALEKLAAARGLPPAQLALAWLLGRN GVAAPIVGLSRPHHLEDALAALTLDLAEEECATLEAPLTARARTPRW" misc_feature 1883664..1884593 /locus_tag="PA1739" /note="Escherichia coli YajO and similar proteins; Region: AKR_EcYajO-like; cd19079" /db_xref="CDD:381305" misc_feature order(1883715..1883723,1883820..1883822,1883835..1883837, 1883916..1883918,1884039..1884044,1884129..1884134, 1884207..1884209,1884291..1884311,1884453..1884455, 1884504..1884521,1884528..1884530,1884537..1884542) /locus_tag="PA1739" /note="putative active site [active]" /db_xref="CDD:381305" misc_feature order(1883820..1883822,1883835..1883837,1883916..1883918, 1884039..1884041) /locus_tag="PA1739" /note="catalytic tetrad [active]" /db_xref="CDD:381305" gene 1884655..1885653 /locus_tag="PA1740" /db_xref="GeneID:878535" CDS 1884655..1885653 /locus_tag="PA1740" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250431.1" /db_xref="GeneID:878535" /translation="MMRRQASVLLLVSMVSATVLPVFARAPGEREPSCAATSIVLPAG ARYPNGIAHAADGTLYVGLVTSGRILRKPPGGEWETFFAGSPAIFAATALRLDEPRGL LWGNSPDFLPAGRRRPHGVFALDLASGAVRRYLTLPGDGMGNDLAVAPDGTVYLSETR DGSLMRLRPGEPAFQVLLRDSRLAGPGGLGAAGIVRVDDDTLLVGNFGSGAIHVVEGV ATRPRLREMELPRTLENPDGMALAPDGSLIVLENAIRSGAGKVLRIAEPLAPGRRGIE VIREGLESPVNLTVTGQGCAYVSESRIRHRLLPGREGEVPARFLIHRLPLDAAGGR" misc_feature 1884763..1885557 /locus_tag="PA1740" /note="Streptogramin lyase [Defense mechanisms]; Region: Vgb; COG4257" /db_xref="CDD:443399" gene complement(1885662..1886033) /locus_tag="PA1741" /db_xref="GeneID:880692" CDS complement(1885662..1886033) /locus_tag="PA1741" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250432.1" /db_xref="GeneID:880692" /translation="MLLKAVRNGLGQAIILADFVSRPRKLQRSAEAQAEVERALRNLS LYQFRACPFCVKTRRAMHRLNLPMQLKDAMNDPQARQALLEGGGKVKVPCLRIEENGQ VRWMYESSEIIAYLEGRFANA" misc_feature complement(1885683..1885901) /locus_tag="PA1741" /note="Glutaredoxin [Posttranslational modification, protein turnover, chaperones]; Region: GrxC; COG0695" /db_xref="CDD:440459" gene 1886278..1887000 /locus_tag="PA1742" /db_xref="GeneID:882018" CDS 1886278..1887000 /locus_tag="PA1742" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amidotransferase" /protein_id="NP_250433.1" /db_xref="GeneID:882018" /translation="MSLRICILETDILRPELIERYEGYGRMFQQLFAKQPIAAEFVIY NVVEGRYPADDECFDAYLVTGSKADSFGPDPWIQTLKTFLLDRYERGDKLLGVCFGHQ LLALLLGGKAERASQGWGMGIHQYQLNERADWMSPALPDLTLLISHQDQVTRLPENAR VIASSDFCPYAAYAIGDQVLCFQGHPEFVHDYSRELLELRQQHLGEELYRKGVDSLAR DHQGTVVAEWMMRFVARQPTGA" misc_feature 1886278..1886997 /locus_tag="PA1742" /note="amidotransferase; Provisional; Region: PRK05665" /db_xref="CDD:168162" misc_feature order(1886569..1886571,1886830..1886832,1886836..1886838) /locus_tag="PA1742" /note="catalytic triad [active]" /db_xref="CDD:153212" gene complement(1887058..1887297) /locus_tag="PA1743" /db_xref="GeneID:881953" CDS complement(1887058..1887297) /locus_tag="PA1743" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250434.1" /db_xref="GeneID:881953" /translation="MRRQTRKFWIVAALAILTNGYSLLGLAQGSAGALARTIECNQAM VRALAANLALKLQSGTPPARPQRWIPERFILDCPA" gene complement(1887325..1887543) /locus_tag="PA1744" /db_xref="GeneID:881964" CDS complement(1887325..1887543) /locus_tag="PA1744" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250435.1" /db_xref="GeneID:881964" /translation="MKRRSPRHYARNTALATLGLYAILMLVVLSLVAGAESARNATPD NDTATTFSNQIGQALPGLLSGLNSRRAG" gene complement(1887698..1888186) /locus_tag="PA1745" /db_xref="GeneID:881939" CDS complement(1887698..1888186) /locus_tag="PA1745" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250436.1" /db_xref="GeneID:881939" /translation="MPKWIALCLIPLLASCATCRQDSDREKLLYENDMLQAKLIIVAN DRDRLPLAQALLERAARDDRSGEADFYQAVLIARRDGQASDCERITRLLERSAERRYP LANAMLYKIYAEPFLLPRADIPKAETYRQAYAELPVARSGYPSFERARQVVDRLLAPT SS" gene 1888407..1888913 /locus_tag="PA1746" /db_xref="GeneID:880666" CDS 1888407..1888913 /locus_tag="PA1746" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250437.1" /db_xref="GeneID:880666" /translation="MIREVEGDILLSGAQVIAHGIAPQDHFDSGLALALRERWPSMVR DYRHAAHARAPEPGGIWVWAGVDEQGKTQCIVNLITQGMLHSGRSAKPGKASLEDVGH ALRELARYVRSEGVSSLALPCVATGVGGLDWSEVKPLVVRHLGDLEIPVILYEVYRKG VAAEEKLA" misc_feature 1888407..1888847 /locus_tag="PA1746" /note="macrodomain, Poa1p-like family; Region: Macro_Poa1p-like; cd02901" /db_xref="CDD:394873" misc_feature order(1888425..1888436,1888461..1888472,1888482..1888502, 1888506..1888508,1888644..1888649,1888770..1888793) /locus_tag="PA1746" /note="ADP-ribose binding site [chemical binding]; other site" /db_xref="CDD:394873" gene complement(1888985..1889173) /locus_tag="PA1747" /db_xref="GeneID:882082" CDS complement(1888985..1889173) /locus_tag="PA1747" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250438.1" /db_xref="GeneID:882082" /translation="MKRNVFAAILLGMATTLAVQASFADESSLMENRMVQLNQHAIEQ AQQQQATAPTASDTDAQG" gene complement(1889323..1890012) /locus_tag="PA1748" /db_xref="GeneID:882129" CDS complement(1889323..1890012) /locus_tag="PA1748" /EC_number="4.2.1.17" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="NP_250439.1" /db_xref="GeneID:882129" /translation="MSELISYQFEDGIATLTLNNGKVNAISPAVIDAFNQALDQALQD KAVVIVTGQPGILSGGYDLKVMTSGPENAVNLVAAGSTLARRLLSHPYPVIVACPGHA VAKGAFLLLSADYRIGVDGPFQIGLNEVAIGMTMHHVGIELARDRLRKSAFTRSVINA EMFSPAAAVDAGFLDTLVSADQLQESARAAAQQLKKLNMTAHRNTKLKVRKALLETLD QAIELDKKHLG" misc_feature complement(1889326..1890012) /locus_tag="PA1748" /note="crotonase/enoyl-CoA hydratase family protein; Region: PRK06213" /db_xref="CDD:235744" misc_feature complement(order(1889617..1889619,1889626..1889631, 1889698..1889706,1889710..1889712,1889824..1889838, 1889848..1889850,1889938..1889940,1889944..1889946)) /locus_tag="PA1748" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(1889698..1889700,1889830..1889832)) /locus_tag="PA1748" /note="oxyanion hole (OAH) forming residues [active]" /db_xref="CDD:119339" misc_feature complement(order(1889431..1889436,1889443..1889445, 1889488..1889490,1889497..1889499,1889530..1889532, 1889539..1889544,1889548..1889553,1889557..1889562, 1889575..1889580,1889584..1889592,1889596..1889598, 1889614..1889625,1889662..1889673,1889734..1889736, 1889758..1889760)) /locus_tag="PA1748" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene 1890196..1890681 /locus_tag="PA1749" /db_xref="GeneID:882108" CDS 1890196..1890681 /locus_tag="PA1749" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250440.1" /db_xref="GeneID:882108" /translation="MGPIVSPALHAVQASRFEDVRQARSATGTRTDEGLRRSAGGRYA GASSRGTYQSGAGRVTNPLRRSKVSESLSIHHDVGGHQFETTVDGHRAYLAYMDLGKQ TLDIYRTFVPDSLRGRGIAAALTEHALQYADRMGYSVIPSCSYVERYIERRQRQADPA A" misc_feature 1890409..1890669 /locus_tag="PA1749" /note="Predicted acetyltransferase, GNAT superfamily [General function prediction only]; Region: YidJ; COG2388" /db_xref="CDD:441953" gene complement(1890739..1891815) /locus_tag="PA1750" /db_xref="GeneID:882053" CDS complement(1890739..1891815) /locus_tag="PA1750" /EC_number="2.5.1.54" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phospho-2-dehydro-3-deoxyheptonate aldolase" /protein_id="NP_250441.1" /db_xref="GeneID:882053" /translation="MADLQIDDLNVASNETLITPEQLKREIPLTDKALQTVAQGRQVV RDILDGKDHRLFVVIGPCSIHDIKAAHEYADRLKALAAEVADTLFLVMRVYFEKPRTT VGWKGLINDPYLDDSFKIQDGLHIGRQLLRDLAEKGLPTATEALDPISPQYLQDLISW SAIGARTTESQTHREMASGLSSAVGFKNGTDGSLTVAINALQSVSSPHRFLGINQQGG VSIVTTKGNRYGHVVLRGGNGKPNYDSVSVALCEQDLNKAKIPLNIMVDCSHANSNKD PALQPLVMDNVSNQIVEGNNSIVGLMVESHLGWGSQPIPKDLDQLQYGVSITDACIDW ATTEKSIRSMHAKLKDVLPKRQRG" misc_feature complement(1890757..1891803) /locus_tag="PA1750" /note="3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]; Region: AroG1; COG0722" /db_xref="CDD:440486" protein_bind complement(1890746..1890758) /locus_tag="PA1750" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 1890752..1890764 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1892133..1892510 /locus_tag="PA1751" /db_xref="GeneID:883073" CDS 1892133..1892510 /locus_tag="PA1751" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250442.1" /db_xref="GeneID:883073" /translation="MAGIHFFLSIEVSSVPSLELTDLDADRQLLALEGVSLLVFTSEG CASCRWARRHLPAMELPIERLCWVDAGRNGGLVERYGVFHLPALFMVRDGRFHGALNV PLHQEALRGAVLAGSTALPEELP" misc_feature 1892184..1892432 /locus_tag="PA1751" /note="Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family [Posttranslational modification, protein turnover, chaperones]; Region: CnoX; COG3118" /db_xref="CDD:442352" gene 1892510..1893457 /locus_tag="PA1752" /db_xref="GeneID:883128" CDS 1892510..1893457 /locus_tag="PA1752" /EC_number="1.1.1.169" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="2-dehydropantoate 2-reductase" /protein_id="NP_250443.1" /db_xref="GeneID:883128" /translation="MDSKQQRIGVIGTGAIGGFYGLMLAHAGHDVHFLLRSEFEAVNR AGLSLNSAVHGFRRLAPVQAYHSAQDMPPCDWLLVGAKTTGNDELAPLIRAAAAPGAK VLLLQNGLGVEERLRPLLPESLHLLGGLCFICVHRGEPGVIEHQAYGGVNLGYHSGPA DERRRREIVEEGAALFRESGLESTAMPDLEQARWQKLVWNIPYNGLSVLLKSSTAPLM ANADSRSLIEAIMEEVIGAAGACGFILPEGYADQLLAATERMPDYRPSMYHDFAHGRP LELAAIYAAPLARAAAAGYRMPRVEALHQALRFLEAQPR" misc_feature 1892510..1893454 /locus_tag="PA1752" /note="putative 2-dehydropantoate 2-reductase; Region: PRK06249" /db_xref="CDD:180488" gene 1893620..1894117 /locus_tag="PA1753" /db_xref="GeneID:883131" CDS 1893620..1894117 /locus_tag="PA1753" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250444.1" /db_xref="GeneID:883131" /translation="MIRSILYATDLGLYAPYVLQHALSLTRAYNAELYVVHVVEPLGL FAESVLQTYLDTERLQDLRAQGLDNVMESIEKRVLEGFRDELGELPQDAALVKSVRVV QGDPPQMILDEAEKLAVDLIVAGSHSHGTQLDTPLGRTAARLVQLAEVPVYLVPMLQH RSRDL" misc_feature 1893620..1894084 /locus_tag="PA1753" /note="Nucleotide-binding universal stress protein, UspA family [Signal transduction mechanisms]; Region: UspA; COG0589" /db_xref="CDD:440354" gene 1894249..1895223 /gene="cysB" /locus_tag="PA1754" /db_xref="GeneID:883007" CDS 1894249..1895223 /gene="cysB" /locus_tag="PA1754" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator CysB" /protein_id="NP_250445.1" /db_xref="GeneID:883007" /translation="MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDEL GVEVFARSGKHLTRVTPAGERIIHTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHT QARYALPNVISGFIKQYPDVSLHMHQGTPMQIAEMAADGTVDFAIATEALELFGDLIM MPCYRWNRCVIVPHGHPLTKLPKLTLEALAEQPIVTYVFGFTGRSKLDEAFSQRGLVP KVVFTAADADVIKTYVRLGLGVGIVAHMAVDPKLDNDLVILDASHLFESSVTKIGFRR GTFLRGFMCDFIEKFAPHLTRELLAKAVQCHNKAELDELFDGIELPVY" misc_feature 1894249..1895220 /gene="cysB" /locus_tag="PA1754" /note="HTH-type transcriptional regulator CysB; Region: cysB; PRK12681" /db_xref="CDD:183678" gene complement(1895280..1895627) /locus_tag="PA1755" /db_xref="GeneID:879771" CDS complement(1895280..1895627) /locus_tag="PA1755" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250446.1" /db_xref="GeneID:879771" /translation="MRITMVKKVLANGEDCRKCKEVRQRLEQGGYLPRIHRTLVADER DPNSAGWMVAAQYGVETAPFFVVRHDDGREQVYTVFMSFLHEVLEPRAEQAADADREA LARLAGRDNLDML" gene complement(1895692..1896495) /gene="cysH" /locus_tag="PA1756" /db_xref="GeneID:878560" CDS complement(1895692..1896495) /gene="cysH" /locus_tag="PA1756" /EC_number="1.8.4.8" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphoadenosine phosphosulfate reductase" /protein_id="NP_250447.1" /db_xref="GeneID:878560" /translation="MLPFATIPATERNSAAQHQDPSPMSQPFDLPALASSLADKSPQD ILKAAFEHFGDELWISFSGAEDVVLVDMAWKLNRNVKVFSLDTGRLHPETYRFIDQVR EHYGIAIDVLSPDPRLLEPLVKEKGLFSFYRDGHGECCGIRKIEPLKRKLAGVRAWAT GQRRDQSPGTRSQVAVLEIDGAFSTPEKPLYKFNPLSSMTSEEVWGYIRMLELPYNSL HERGYISIGCEPCTRPVLPNQHEREGRWWWEEATHKECGLHAGNLISKA" misc_feature complement(<1895707..1896495) /gene="cysH" /locus_tag="PA1756" /note="5'-adenylylsulfate reductase; Region: PLN02309" /db_xref="CDD:215175" gene 1896630..1897247 /gene="thrH" /locus_tag="PA1757" /db_xref="GeneID:877969" CDS 1896630..1897247 /gene="thrH" /locus_tag="PA1757" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phosphoserine phosphatase" /protein_id="NP_250448.1" /db_xref="GeneID:877969" /translation="MEIACLDLEGVLVPEIWIAFAEKTGIDALKATTRDIPDYDVLMK QRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMR QLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTML SEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSRSLSL" misc_feature 1896630..1897244 /gene="thrH" /locus_tag="PA1757" /note="bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH; Region: thrH; PRK13582" /db_xref="CDD:237437" misc_feature order(1896630..1896632,1896870..1896875,1896882..1896890, 1896909..1896911,1896921..1896923,1896933..1896935, 1896942..1896968,1897005..1897007,1897011..1897016, 1897032..1897037,1897044..1897046,1897053..1897064) /gene="thrH" /locus_tag="PA1757" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:319793" misc_feature order(1896648..1896662,1896897..1896902,1897026..1897028, 1897080..1897085,1897092..1897097) /gene="thrH" /locus_tag="PA1757" /note="active site" /db_xref="CDD:319793" misc_feature 1896648..1896662 /gene="thrH" /locus_tag="PA1757" /note="HAD signature motif I; other site" /db_xref="CDD:319793" gene complement(1897290..1898651) /gene="pabB" /locus_tag="PA1758" /db_xref="GeneID:879428" CDS complement(1897290..1898651) /gene="pabB" /locus_tag="PA1758" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="para-aminobenzoate synthase component I" /protein_id="NP_250449.1" /db_xref="GeneID:879428" /translation="MPSCHVHPLPYHSDPSCLFAIIHEAPGAVMLDSGRPIATRGRYD LMSAWPLAELAPLPDESANRFFARLREAAGSLGPAQLPAPYELPFAGGLLGYLSYDLG RRIERIGEHARDDLGLPLASVGLYAWALISDHQAGTSQLVFHPRLDERERQRLIALFS EEAQGTAGNFKLLGKFRRSISASDYRQAIRRIQDYIQAGDCYQVNYSQRFQAACSGSP WPAYRALREACPTPFSGYLRLADGAILSLSPERFLKLGKGKVETRPIKGTRPRGKTPE EDMALAASLLASPKDRAENLMIVDLLRNDIGRSCQPGSVRVPELFALESYPNVHHLVS SVTGELAPGKDALDLLEGSFPGGSITGAPKIRAMQIIDELEPSRRGIYCGSLFYLDVR GEMDSSIAIRTLLVRDGQVSCWGGGGIVADSHWEDEYQETLDKVRVLLETLEGMAGTA SPE" misc_feature complement(1897320..1898639) /gene="pabB" /locus_tag="PA1758" /note="Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism, Coenzyme transport and metabolism]; Region: TrpE; COG0147" /db_xref="CDD:439917" protein_bind complement(1898588..1898600) /gene="pabB" /locus_tag="PA1758" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1898816..1901521 /locus_tag="PA1759" /db_xref="GeneID:878000" CDS 1898816..1901521 /locus_tag="PA1759" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250450.1" /db_xref="GeneID:878000" /translation="MDAVQDPAAGSLSRSRIVPPQVPAEYSLRPAIRNLLDRNPHSRV LMFSAPAGFGKTCALAALARERTVADQAVAWLSLAEEDDDPARFCRQLIEALGEAVPQ LGDDAQTYLQNTMRVPVVAVIESLLGDLDRYARPLLLVLDDLHLVSNPDIFTGLNRLV QYAPPGLVLALGTRSQPALSLATWRAKGLLLEIGLEELRLGFEETREYLERSGLYLDE PCLKALYGQTEGWVVGVHLVSLWLRQQPQVQEMALLDGDKQAVSAYLLAAVFERLPGD LQEALLALGVASQLSGDLANALTGRQDGQALLERLESMQLFLLPLDRERQWYRFHLLF ADFLRNRLRDSDPDRFKQLHFNASLWFTNHHMPTFAIEHACAAEDPEMIAALVDGCGL ELINRGQLSLIYRWRKHVPDEIAERYPILVLTDVWSRASDLSLGEANRIIDELLARWG ESRGDGPMGDQYLSALAVKAVVALQKDDLELCIALARRVEVQLGQNAAFLEVAVLITA ALAQVVRGQGDQARRLLGLAQQRNHFLEGRYLDMQLANVEVILALEQGQVKQAQLLIE RLRQRARPLFEKSRSALALPTITEALTAYYRIELDGLEERLGWALGHVDVINPIDFYA QGQICLARTQRLLGRPKEALASLAAMQALASRNQSWRFFAQAMAEEINLILQDSGPDR LKRAEQRLKSVDWNKMAAHYRNMAFNPVNWSLGVSRVRLLQGRGHFSEALHEITQLRG TLQPGWHGLQRLRLDILAALSYQRLGYQERANSLLGECLINAEREGVRSLFIEEGDGI RQLLQQLESTERQPALQTFIRGLLGIWPGQGVRKPQDALEEGLTEREREVVCLAAQGL SNEEIGQRLSLALGTVKWHLHNIYEKLKVRNRTQAIRRARELSLL" misc_feature 1898858..1901512 /locus_tag="PA1759" /note="HTH-type transcriptional regulator MalT; Region: PRK04841" /db_xref="CDD:235315" gene 1901524..1904247 /locus_tag="PA1760" /db_xref="GeneID:880934" CDS 1901524..1904247 /locus_tag="PA1760" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250451.1" /db_xref="GeneID:880934" /translation="MGHRDGVPASTIPLLQTKLFPPGAGGLPLLPRQALIDRLYEARG RRAMVLSAPAGFGKSTILCQLRLRLLEQGAAVAWLSCDETDSEPQRLIQYLLASIQRV VPAFGGNTANLLGTDVAVPLEGILDAFLADLRRLEGPLYLFLDDFHRIRHAALPHGVR YLIENLPDHVRVVASTRFRPRFLVDEPTLKPWTFCLSAEDLRLSREESDAFLLDLKGL ELGERELKLLFKRTEGWITALHLAALALSRNTDREGFLLGLSGTERNIADYLAEDVLA SLPADLQLFLDQTSVLDEFNAELCNALTGRRDGLDMLMRLQNEQLFVIALDDQREWFR YHHLFAEFLQGRLSRHADPTPLLHAAARWCEGRDLADRAIKYALRARDYLFAAELLER QGARLIAGNRVYGILGMLNGIPAEVIREHPVFQIFYAWQLAFEQRFAEAEALIEEVSH RLLQGRGKVMHFGLGELLAAAQVLKALVLLYQDKLEACLKVARHWLSMVPSNQPVFRA SLLCVQASAHALLGDYAEAAGAIGSAREDLKVADSEYLQVVTSLIESLICKESGDLER GRAIAESARNRVEQVFGRRSRVGGPLSLAYADLLYEQDRHAGVLAELPLATVWRDVAT PVELLSRGQLVMAKARFFSGAAEQGLAQLDEWLSGLLSPGYERVYAHAMSCKVQFLLW LRRPNEAERVCLQLERHLAGLSGERHADAQTALVLAEARLALSERHAERAQSKLESCL AGYSSAYQRDRRLRLSLLLSVAYWQKGNSEKAIGLFLATLEEAWNLGYRRLFQDDALW LLPMWESWREAEPKRAAAWQGLADLLREQCRKLSVDPESFDENQDVSHREREILRLVA AGLSNRDIAQAVHLSEATIKWHLHNLFAKLGVKSRTQAVLKGKSLGLLSEA" misc_feature 1901560..1904226 /locus_tag="PA1760" /note="HTH-type transcriptional regulator MalT; Region: PRK04841" /db_xref="CDD:235315" gene 1904479..1904916 /locus_tag="PA1761" /db_xref="GeneID:880932" CDS 1904479..1904916 /locus_tag="PA1761" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250452.1" /db_xref="GeneID:880932" /translation="MKKHLFLATAVLAAPLLAHADLKAMDDGALSDVTGQAGISISGT FQGSVGAVTYTDTDTNGGSLRLENISLPALTIDDTKPLTIDVVTTDIGGKSTQQLAIG LPAITGDVTVGAIKVGDTSAASIGSLTVSGLNMAGSTIKVWGH" misc_feature 1904485..>1904655 /locus_tag="PA1761" /note="Family of unknown function (DUF6160); Region: DUF6160; pfam19657" /db_xref="CDD:437489" gene 1904995..1905756 /locus_tag="PA1762" /db_xref="GeneID:877925" CDS 1904995..1905756 /locus_tag="PA1762" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250453.1" /db_xref="GeneID:877925" /translation="MFEILLGSLIGLFGFTQTVDTKPQPQGTVNLSQPLTPNGPYRES VQLEPMSQLQFRNVIRQAYDYSCGSAALTTLLDYYLGRNLEERQVMEGLLRYGEADKI VQRRGFSLLDMKRYAAALGYKSGGFRAEFSDLDALEHPALVPIHYAGFKHFVVVRDVY NDHVFVADPALGNISFTRTRFEEIWDQNVLFVIFPSGQEPRNALALNDRDMRLVDDRT VSLLAFREFPQINKITENQVRELGTGGDVIHLRTK" misc_feature 1905088..1905582 /locus_tag="PA1762" /note="Predicted double-glycine leader peptidase, C39-like (CLD) domain [Intracellular trafficking, secretion, and vesicular transport]; Region: C39G; COG3271" /db_xref="CDD:442502" gene 1905797..1906822 /locus_tag="PA1763" /db_xref="GeneID:878031" CDS 1905797..1906822 /locus_tag="PA1763" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250454.1" /db_xref="GeneID:878031" /translation="MRIRGYTCAAALMLSISGLSVAEEASVDQARDALAKKNDDADSA KALEEVFQAAEKSYTLLKKGERTLTYGFDYALVRDQRLTLVPLTKTSGGTQIYGLAGR QSQSQHTFTNSFTFDYGIWDNLTFSFRLPLVAKYDTEMDTHAYSLGDVSATLRWQPWA AVRGRPVTTLYTTIGLPTGDSPYKTNLDKDISTGNGYYSLGFGANMSYVIDPVVLYGS LGYTWNLPVDDVHQTLADNSQLEKVSPGNTINFNMGMAYALSYDVSLATSYQMAYTLK NRYHTTAGTFESSEQTSSIMNFSLGLRTSPDYIVNVNAGFGLTEDSPDVLLGLSVPLD IKGLKAQ" misc_feature 1906061..1906789 /locus_tag="PA1763" /note="Putative MetA-pathway of phenol degradation; Region: Phenol_MetA_deg; pfam13557" /db_xref="CDD:463920" protein_bind 1906604..1906616 /locus_tag="PA1763" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 1906842..1908440 /locus_tag="PA1764" /db_xref="GeneID:877939" CDS 1906842..1908440 /locus_tag="PA1764" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250455.1" /db_xref="GeneID:877939" /translation="MKMRIAPLWLALAGVCLAWIPPAGAQMANDLTIGNPKAMALGNA VTADETGIDSVHYNPAALTRMKGRQATVKLLTGVMDIRAGFKAPPNYGEGTFGLRDDP VANSHSRTLTPTMYLPGLGGMTDVPLLVAPLAGISINPPGSKFTFATNVYTPQALGYS RDSDSDPARYQGREVSLQRLTYFSPTLAYQVNDELSVGLSVGFSHQAVALNEDFRAPN QLLGLLQQTKEIGCLPGMQEILEVFFNVCGGNIGPFQNLANIDLDMQQSLSPSFNLGV LWEPTDWFAWGATYQSESRMRLKGKYRVDYGQGWQGFWTGVHKSLGGAILGQMFPYGN VDEEHGNATMNMVYPDAFSTGVKLRPFKKWQFNFDLKWNGYSDWNEFKIEFDRELDLL RIAKYLDSKDATSHSITLDRGYRDTWSWAMGVQYDVNDRLQLRAGYEYRPSAIPKGQA DILVPIGDANLYGLGLGYQWDKDTVIDVGFNYFVTKQSVKADNSCNLNCTGLDNLVYN PYAGLDVDTTVKAYIFAMTYRTTF" misc_feature 1906914..1908437 /locus_tag="PA1764" /note="Outer membrane protein transport protein (OMPP1/FadL/TodX); Region: Toluene_X; pfam03349" /db_xref="CDD:427255" gene 1908454..1909641 /locus_tag="PA1765" /db_xref="GeneID:878293" CDS 1908454..1909641 /locus_tag="PA1765" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250456.1" /db_xref="GeneID:878293" /translation="MRASIVLCVFSLALPASSPGWASGGRYLTWVDDNGGVHNTFVDG QFDRQQRQARQRIGQSDQARVLNKADNATQWPGNSSGGESKRRYYTWIDANGNVQNSF YAGAQVAGQRADYVLPNGEHSAEYIDAEAFEGKGFVRSENGSPYYTWVDEKGRMHNSQ IPPEERAARFKREAAPSSQIAFTEGRQIEFKQRPAALPGLDGAGQQSDALKALLKGTE MTIDDLYQDLQRRCCEQIAESDFTELDADEPRYEELNRFSPSFDFPMGRSFYAAIRLP RSQGVYGLRIRSFANRQVVYPSLLFLDEHKRPTRLVSDAVYKLNPETWYRYAFIEGTV PVRANRGERYVLLLTTDEDRSLQTLDNKPFKRPLQDLAVNEAGMQVHEHARQGGFELA VVR" misc_feature <1908889..1908996 /locus_tag="PA1765" /note="Domain of unknown function (DUF4124); Region: DUF4124; pfam13511" /db_xref="CDD:433269" misc_feature 1909246..1909626 /locus_tag="PA1765" /note="Maltose operon periplasmic protein precursor (MalM); Region: MalM; pfam07148" /db_xref="CDD:429318" gene complement(1909698..1910681) /locus_tag="PA1766" /db_xref="GeneID:877800" CDS complement(1909698..1910681) /locus_tag="PA1766" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250457.1" /db_xref="GeneID:877800" /translation="MSIWKTWKDLTAKGVMGINRRNADYVLKYNKRHLYPVVDDKIIT KERALEAGIHVPEMYGIIETEKGIDKLNEIIGEHNDFVIKPAQGAGGDGIMVIADRFE GRYKTVSGKIVSHEEIEHHISSILSGLYSLGGHRDRVLIEYRVTPDQIFKSISYEGVP DIRIIVLMGYPVMAMLRLPTRQSGGKANLHQGAIGVGVDLATGVTLRGTWLNNKIAKH PDTTNAVDGVQLPNWDGFMKLAAGCYELSGLGYIGVDMVLDQEKGPLILELNARPGLN IQIANDSGLVHRCHAVEARLEELKAKGIEESAEERVRFSQQLFGHVQQHQG" misc_feature complement(1909713..1910672) /locus_tag="PA1766" /note="Carbamoyl-phosphate synthase L chain, ATP binding domain; Region: CPSase_L_D2; cl17255" /db_xref="CDD:473076" gene complement(1910685..1912211) /locus_tag="PA1767" /db_xref="GeneID:880717" CDS complement(1910685..1912211) /locus_tag="PA1767" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250458.1" /db_xref="GeneID:880717" /translation="MRSLNLHLKVLIAILLTLGVAITAYQIFVQGIPVTEAETDDLWN IDAKVDFVATPKTPVKVQMFVPPLSQDYVSLNESFVSNNYGVSINRADGNRKVTWSAR RANGKQTLYYRLVLTKRYTGEKTKEKGPIFRDSLPLEGPEKIAAEALLAPIRQHSADV ETFVSEAIKRANNGNDDNVKLLMAGDTSLEKKAHIVETLLSIAHVPMERVHTIRLVAD LQQSPELWLRSFNGENWLYFNVVTGEQGLPSDRLIWWLGDEPLMTIDGGKKAQVSFSL NSSEMNAIRLAKLSDENTEAAFLEYSLYGLPLSTQQTFQIMIMIPIGVLVILILRNLI GLQTLGTFTPVLIALAFRETGLQWGIALFTVITALGLSLRSYLEHLKLQMLPRLSVVL TFVVVMIAVISLFSHKLGFESGLSIALFPMVILTMTIERLSITWEERGGGHAMKVAIG TLFAASLAHILMRIPELVYFIFTFPAVLLILVAFMLAMGRYRGYRLTELFRFKALLKD " misc_feature complement(1911654..1912136) /locus_tag="PA1767" /note="Inactive transglutaminase fused to 7 transmembrane helices; Region: Transglut_i_TM; pfam14400" /db_xref="CDD:433934" misc_feature complement(1910694..1911437) /locus_tag="PA1767" /note="7 transmembrane helices usually fused to an inactive transglutaminase; Region: 7TM_transglut; pfam14402" /db_xref="CDD:433936" gene complement(1912217..1912756) /locus_tag="PA1768" /db_xref="GeneID:880715" CDS complement(1912217..1912756) /locus_tag="PA1768" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250459.1" /db_xref="GeneID:880715" /translation="MKLKPLAPLLCLFIAVPGLSVAAEKTVYGLNEYARINDPDIQLA AKLDTGAKTASLSARDIKRFKRDGETWVRFYLATDNADDTPIEKPLARISKIKRRHGD FNPDEGKAYTARPVIELQVCMGKAIRTIEVNLTDRSAFQYPLLIGSEALKKFDALVDP SLKYSAGKPGCKPDAKPAE" misc_feature complement(1912250..1912678) /locus_tag="PA1768" /note="Putative ATP-dependant zinc protease; Region: Zn_protease; pfam05618" /db_xref="CDD:283308" gene complement(1913047..1913871) /locus_tag="PA1769" /db_xref="GeneID:880724" CDS complement(1913047..1913871) /locus_tag="PA1769" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate synthase regulatory protein" /protein_id="NP_250460.1" /db_xref="GeneID:880724" /translation="MQMKRTAFFISDGTGITAETLGQSLLAQFENISFVKLTRPYIDT EEKARAMVQQINNAAESDGARPIIFDTIVNRDIRAVLAQSNGFMIDIFATFLSPLEQE LSADSSYSVGKSHSIGHNSNYMDRIEAVNFALDNDDGARTHYYDKADLILVGVSRCGK TPTCLYMALQYGIRAANYPLTEEDMERLQLPNALKQYKHKLFGLTIDPDRLTAIRNER KPNSRYASFAQCEFEVREVESLFRRENIAYINSTHFSVEEISAKILVEKGVERRFK" misc_feature complement(1913050..1913871) /locus_tag="PA1769" /note="pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator; Region: PRK05339" /db_xref="CDD:235419" gene 1914037..1916412 /gene="ppsA" /locus_tag="PA1770" /db_xref="GeneID:878597" CDS 1914037..1916412 /gene="ppsA" /locus_tag="PA1770" /EC_number="2.7.9.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate synthase" /protein_id="NP_250461.1" /db_xref="GeneID:878597" /translation="MVEYVVSLDKLGVHDVEHVGGKNASLGEMISNLAGAGVSVPGGF ATTAQAYRDFLEQSGLNDRIHAALDALDVDDVNALAKTGAQIRQWVMEAEFPARLDSE IRQAFAALANGNDNLAVAVRSSATAEDLPDASFAGQQETFLNIRGVDNVIRAAKEVFA SLFNDRAIAYRVHQGFDHKLVALSAGVQRMVRSETGTAGVMFTLDTESGFRDVVFITG AYGLGETVVQGAVNPDEFYVHKPTLEAGRPAILRRNLGSKAIKMIYGDEAKAGRSVKV VDVDRADRARFALSDAEVTELAKQAMIIEKHYGRPMDIEWAKDGDDGKLYIVQARPET VKSRASATVMERYLLKEKGTVLVEGRAIGQRIGAGPVKVINDVSEMDKVQPGDVLVSD MTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATQILQDGQGVTVS CAEGDTGFIFEGELGFDVRKNSVDAMPDLPFKIMMNVGNPDRAFDFAQLPNEGVGLAR LEFIINRMIGVHPKALLNFAGLPADIKESVEKRIAGYPDPVGFYVEKLVEGISTLAAA FWPKKVIVRLSDFKSNEYANLIGGKLYEPEEENPMLGFRGASRYISESFRDCFELECR ALKKVRNEMGLTNVEIMVPFVRTLGEASQVVELLAGNGLKRGENGLKVIMMCELPSNA LLADEFLEFFDGFSIGSNDLTQLTLGLDRDSGIVAHLFDERNPAVKKLLANAIAACNK AGKYIGICGQGPSDHPDLARWLMEQGIESVSLNPDSVLDTWFFLAEGQDQA" misc_feature 1914037..1916394 /gene="ppsA" /locus_tag="PA1770" /note="phosphoenolpyruvate synthase; Validated; Region: PRK06464" /db_xref="CDD:235809" gene 1916482..1917492 /gene="estX" /locus_tag="PA1771" /db_xref="GeneID:878175" CDS 1916482..1917492 /gene="estX" /locus_tag="PA1771" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_250462.1" /db_xref="GeneID:878175" /translation="MQSSSRLFPVALVSAELRADLTEDIYRLKPGNSPDASVELVVTR LGQQAAGERRGPPVILLHGSFSNRRFWYSPRALGLGPYLARAGFDVWLPEMRGHGLSI RNDGYRDNRVADYARYDLPALASFIHEQCGQPAHWIGHSLGGVVLAAGLGGGYLDQAR IASVALFGSQVSTAHWLFRLPMAGILARLLLRRVDALSGSRWRQGPEDEPVGLALEVL RWHGLFGRFGEPGNDWWKGLAAVDVPLLAVAGAGDRQDPSWACRKLFEQFASSEREYL LLGHEAGYAEDYGHIEMLIGKAAQLEVWPLVERWLRQRSPAGDESAWSEALDVSEAGI SG" misc_feature 1916593..1917426 /gene="estX" /locus_tag="PA1771" /note="Predicted alpha/beta hydrolase [General function prediction only]; Region: COG4757" /db_xref="CDD:443790" gene 1917599..1918087 /locus_tag="PA1772" /db_xref="GeneID:880779" CDS 1917599..1918087 /locus_tag="PA1772" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ribonuclease activity regulator protein RraA" /protein_id="NP_250463.1" /db_xref="GeneID:880779" /translation="MHYVTPDLCDAYPELVQVVEPMFSNFGGRDSFGGEIVTIKCFED NSLVKEQVDKDGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVI AQTDLGVQALASHPLKTDKRGIGDLNVAVTFGGVTFRPGEFVYADNNGIIVSPQALKM PE" misc_feature 1917599..1918075 /locus_tag="PA1772" /note="ribonuclease E inhibitor RraA; Region: PRK09372" /db_xref="CDD:236487" gene 1918275..1919273 /gene="cmaX" /locus_tag="PA1773" /db_xref="GeneID:880766" CDS 1918275..1919273 /gene="cmaX" /locus_tag="PA1773" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_250464.1" /db_xref="GeneID:880766" /translation="MQAYESGDERGLIYGYVLNGRGGGRRVGRNQIAVLDLLPEESLW LHWDRGVPEAQAWLRDSAGLSEFACDLLLEEATRPRLLDLGAESLLVFLRGVNLNPGA EPEDMVSLRVFADARRVISLRLRPLKAVADLLEDLEAGKGPKTASEVVYYLAHYLTDR VDTLISGIADQLDAVEELVEADERASPDQHQLRTLRRRSAGLRRYLAPQRDIYSQLAR YKLSWFVEDDADYWNELNNRLTRNLEELELIRERISVLQEAESRRITERMNRTMYLLG IITGFFLPMSFVTGLLGINVGGIPGADAPHGFWLACLLIGGVATFQWWVFRRLRWL" misc_feature 1918401..1919270 /gene="cmaX" /locus_tag="PA1773" /note="Salmonella typhimurium Zn2+ transporter ZntB-like subgroup; Region: ZntB-like_1; cd12833" /db_xref="CDD:213367" misc_feature order(1918410..1918412,1918419..1918421,1918503..1918511, 1918548..1918550,1918554..1918556,1918596..1918601, 1918641..1918652,1918656..1918661,1918743..1918745, 1918752..1918754,1918902..1918907,1918914..1918916, 1918980..1918982) /gene="cmaX" /locus_tag="PA1773" /note="Cl binding site [ion binding]; other site" /db_xref="CDD:213367" misc_feature order(1918470..1918472,1918479..1918484,1918512..1918514, 1918518..1918520,1918668..1918670,1918680..1918682, 1918716..1918718,1918725..1918727,1918737..1918739, 1918749..1918751,1918758..1918763,1918770..1918772, 1918779..1918784,1918788..1918793,1918800..1918802, 1918839..1918844,1918848..1918853,1918860..1918865, 1918872..1918877,1918881..1918886,1918896..1918898, 1918902..1918907,1918914..1918919,1918926..1918931, 1918962..1918967,1918971..1918976,1918983..1918988, 1918992..1918997,1919004..1919009,1919013..1919018, 1919022..1919030,1919037..1919060,1919064..1919102, 1919106..1919114,1919118..1919135,1919139..1919162, 1919196..1919201,1919208..1919213,1919247..1919249, 1919256..1919258) /gene="cmaX" /locus_tag="PA1773" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:213367" gene 1919322..1919576 /gene="crfX" /locus_tag="PA1774" /db_xref="GeneID:878580" CDS 1919322..1919576 /gene="crfX" /locus_tag="PA1774" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250465.1" /db_xref="GeneID:878580" /translation="MRMHDPFEESLRDLLKASAPQPDDDARLGRVLKTANRQVGAGDL FSLMGHWLQALMIGINNGSPHLAPVSRISAKNASSADKAE" gene 1919579..1920403 /gene="cmpX" /locus_tag="PA1775" /db_xref="GeneID:877590" CDS 1919579..1920403 /gene="cmpX" /locus_tag="PA1775" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250466.1" /db_xref="GeneID:877590" /translation="MQFDIWTQSLLTAMNTLWGKLAGFIPNLLGALVVVLLGFVIAKL LDALLSKLLAKLGLDRLMGGTGLTKLLARVGIQVPVSTLVGKIVYWFVLLVFLVSAAE SLGLQRVSATLDVLALYLPKVFGAALVLIVGVLLAQLVNSVVRGAADGVGLEYANGLG RIAQWLVIIISISVAVGQLEVKTDLLNYIIAIVLITVGLAAALALGLGSREVAGQIIA GIYVRELYQVGQQVKVGDVEGTIEEIGTVKTILLTEEGELVSLANRLLLDQRVTSR" misc_feature 1919603..>1920013 /gene="cmpX" /locus_tag="PA1775" /note="mechanosensitive ion channel; Region: msc; NF033912" /db_xref="CDD:468242" misc_feature 1919882..>1920394 /gene="cmpX" /locus_tag="PA1775" /note="Small-conductance mechanosensitive channel MscK [Cell wall/membrane/envelope biogenesis]; Region: MscK; COG3264" /db_xref="CDD:442495" gene 1920568..1921065 /gene="sigX" /locus_tag="PA1776" /db_xref="GeneID:878527" CDS 1920568..1921065 /gene="sigX" /locus_tag="PA1776" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor SigX" /protein_id="NP_250467.1" /db_xref="GeneID:878527" /translation="MTRAYEELMRRYQRTLFNVCARYLGNDRDADDVCQEVMLKVLYG LKNFEGKSKFKTWLYSITYNECITQYRKERRKRRLMDALSLDPLEEASEEKSPKVEER GGLDRWLVHVNPIDREILVLRFVAELEFQEIADIMHMGLSATKMRYKRALDRLREKFS DATET" misc_feature 1920571..1921062 /gene="sigX" /locus_tag="PA1776" /note="RNA polymerase sigma factor SigX; Reviewed; Region: PRK09640" /db_xref="CDD:236603" protein_bind 1921029..1921042 /gene="sigX" /locus_tag="PA1776" /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" protein_bind complement(1921039..1921052) /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" protein_bind complement(1921094..1921107) /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" protein_bind complement(1921104..1921117) /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" gene 1921174..1922226 /gene="oprF" /locus_tag="PA1777" /db_xref="GeneID:878442" CDS 1921174..1922226 /gene="oprF" /locus_tag="PA1777" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="outer membrane porin F" /protein_id="NP_250468.1" /db_xref="GeneID:878442" /translation="MKLKNTLGVVIGSLVAASAMNAFAQGQNSVEIEAFGKRYFTDSV RNMKNADLYGGSIGYFLTDDVELALSYGEYHDVRGTYETGNKKVHGNLTSLDAIYHFG TPGVGLRPYVSAGLAHQNITNINSDSQGRQQMTMANIGAGLKYYFTENFFAKASLDGQ YGLEKRDNGHQGEWMAGLGVGFNFGGSKAAPAPEPVADVCSDSDNDGVCDNVDKCPDT PANVTVDANGCPAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQYPSTSTTV EGHTDSVGTDAYNQKLSERRANAVRDVLVNEYGVEGGRVNAVGYGESRPVADNATAEG RAINRRVEAEVEAEAK" misc_feature 1921246..1921725 /gene="oprF" /locus_tag="PA1777" /note="OprF membrane domain; Region: OprF; pfam05736" /db_xref="CDD:399036" misc_feature 1921888..1922208 /gene="oprF" /locus_tag="PA1777" /note="Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; Region: OmpA_C-like; cd07185" /db_xref="CDD:143586" misc_feature order(1921909..1921914,1922011..1922016,1922023..1922025, 1922035..1922040,1922047..1922049,1922176..1922178, 1922188..1922190) /gene="oprF" /locus_tag="PA1777" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene complement(1922295..1923032) /gene="cobA" /locus_tag="PA1778" /db_xref="GeneID:877770" CDS complement(1922295..1923032) /gene="cobA" /locus_tag="PA1778" /EC_number="2.1.1.107" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="uroporphyrin-III C-methyltransferase" /protein_id="NP_250469.1" /db_xref="GeneID:877770" /translation="MSGKVWLVGAGPGDPELLTLKAVRALQDADVVMVDDLVNPSILE HCPSARLVRVGKRGGCRSTPQDFIQRLMLRHARQGRSVVRLKGGDPCIFGRAGEEAEW LARHGIDSEIVNGITAGLAGATACGIPLTYRGISRGVTLVTAHTQDDSPLAWEALARS GTTLVVYMGVARLAEIQAGLLAGGMAEDTPLAMIENATLGNQRECRSNLGELLRDAGR FALKSPAILVIGEVTRDIVSQPISLSA" misc_feature complement(1922298..1923032) /gene="cobA" /locus_tag="PA1778" /note="uroporphyrinogen-III C-methyltransferase; Region: PRK06136" /db_xref="CDD:235711" misc_feature complement(order(1922355..1922366,1922436..1922438, 1922442..1922447,1922451..1922453,1922520..1922537, 1922592..1922600,1922604..1922606,1922667..1922669, 1922679..1922684,1922748..1922759,1922766..1922774, 1922922..1922930,1922997..1922999)) /gene="cobA" /locus_tag="PA1778" /note="active site" /db_xref="CDD:381169" misc_feature complement(order(1922355..1922363,1922436..1922438, 1922442..1922447,1922451..1922453,1922529..1922537, 1922667..1922669,1922679..1922684,1922751..1922759, 1922766..1922774,1922922..1922924,1922997..1922999)) /gene="cobA" /locus_tag="PA1778" /note="SAM binding site [chemical binding]; other site" /db_xref="CDD:381169" misc_feature complement(order(1922433..1922435,1922547..1922549, 1922604..1922624,1922634..1922648,1922661..1922663, 1922673..1922675,1922682..1922693,1922697..1922705, 1922721..1922723,1922730..1922735,1922739..1922744, 1922757..1922762,1922766..1922768,1922883..1922885, 1922889..1922891,1922949..1922954,1922961..1922966, 1922970..1922987)) /gene="cobA" /locus_tag="PA1778" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:381169" misc_feature complement(order(1922364..1922366,1922520..1922531, 1922592..1922600,1922604..1922606,1922748..1922756, 1922922..1922930)) /gene="cobA" /locus_tag="PA1778" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:381169" gene complement(1923044..1925770) /locus_tag="PA1779" /db_xref="GeneID:878151" CDS complement(1923044..1925770) /locus_tag="PA1779" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="assimilatory nitrate reductase" /protein_id="NP_250470.1" /db_xref="GeneID:878151" /translation="MSTDSPLRTTASTCCYCGVGCGVLIEHDGERILGVQGDPRHPAN FGRLCSKGASLHLTGDLQARALYPQLRLGKQLARARSDWESALEHAAGRFAETIREHG PDSVAFYISGQLLTEDYYAFNKLARALVGTNNIDSNSRLCMSSAVVGYKRSLGADAPP CSYEDLDCADCVLIAGSNMAFAHPVLFRRLEAAKAARPEMRIVVIDPRRTDTCELADL HLALLPGTDVALFHGILHILLWEDWIDRSFIAEHTEGFADLKELVRDYTPAAVADICG IDRADLQRCAEWIGRSPRFLSLWCMGLNQSSAGSAKNSALINLHLATGKIGRAGCGPF SLTGQPNAMGGRETGSLANLLPGHREAADPGHRAEVAHYWGVEQLPTSPGLSAIELFD AVHDGRIKALWIACTNPAQSLPDQRKIHEALARCPFVVVQEAFAGTETCQYADLLLPA ASWGEKEGSVTNSERRISHVRRAVPPPGEARQDWNIVCDFARRLEGHLRPAKPGLFAF ADSRSLFDEYKLLTAGRDLDLSGLSYALLDRLGPQQWPFPTGAEQGTARLYADGRFPT ASGRAQLVAEPYRAAQEKRDARYPLTLNTGRLRDQWHGMSRTGTCARLFGHEEEALVH LHPEELRRRQLLDGQLVRLKSRRGALVLPVSADDSVRPGQAFLPMHWGDRFLKGLGCN VLTLPAFDPLSKQPELKHAGVQVESVELPWRLFALVETDIQARFEALRALCEVFDHAS FSLAGRERPALLVSAAHHEAPGADLLERIDRQLELLDGPILAYDDPRRAIGKRVRLED GRIVAVRLAGETLARDWLKELWLTGRADSELRRWLLAPLGAAPGRPSQGAGGKTLCSC QNVSQQTVLGGIARGLDLDGLKREFGCGTGCGSCVPEIKRLLAAPRPMAANA" misc_feature complement(1923644..1925758) /locus_tag="PA1779" /note="Predicted molibdopterin-dependent oxidoreductase YjgC [General function prediction only]; Region: YjgC; COG3383" /db_xref="CDD:442610" misc_feature complement(<1923071..>1923424) /locus_tag="PA1779" /note="nitrite reductase [NAD(P)H], large subunit; Region: nitri_red_nirB; TIGR02374" /db_xref="CDD:162827" misc_feature complement(1923071..1923211) /locus_tag="PA1779" /note="Bacterioferritin-associated ferredoxin [Inorganic ion transport and metabolism]; Region: Bfd; COG2906" /db_xref="CDD:442150" gene complement(1925797..1926123) /gene="nirD" /locus_tag="PA1780" /db_xref="GeneID:878289" CDS complement(1925797..1926123) /gene="nirD" /locus_tag="PA1780" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="assimilatory nitrite reductase small subunit" /protein_id="NP_250471.1" /db_xref="GeneID:878289" /translation="MNWLDICSLDEINPLGSRVVAGPKGDIAIFRAADDQVFALDDRC PHKGGPLSQGLIYGKRVACPLHNWQIELESGEAVAPDQGCAHRHPVRVENGRVLLGLD SVALCA" misc_feature complement(1925824..1926117) /gene="nirD" /locus_tag="PA1780" /note="Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain. The Rieske domain is a [2Fe-2S] cluster binding domain...; Region: Rieske_NirD_small_Bacillus; cd03530" /db_xref="CDD:239606" misc_feature complement(order(1925920..1925922,1925926..1925928, 1925935..1925937,1925983..1925988,1925992..1925994)) /gene="nirD" /locus_tag="PA1780" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:239606" gene complement(1926176..1928626) /gene="nirB" /locus_tag="PA1781" /db_xref="GeneID:877714" CDS complement(1926176..1928626) /gene="nirB" /locus_tag="PA1781" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="assimilatory nitrite reductase large subunit" /protein_id="NP_250472.1" /db_xref="GeneID:877714" /translation="MKKIKLVMVGNGMAGVRTLEELLKLNSDFYDITVFGAEPHPNYN RILLSPVLAGEQTFEEIVLNDLNWYAENGIKLLLDRKVVQIDRLRRRVVAADGSEAEY DRLLLATGSLPFILPIPGNRLQGVIGYRDIADTQAMIDCARTHSHAVVIGGGLLGLEA ANGLKQRGMDVTVVHLSDWLLERQLDRTAGKLLQGALEARGIRFRLNTQTQELMDNGS GRVCAVQFNDGDVIPADLVVMAAGIRPNTELAESAGIPCNRGILVNDTLQTYDPRIYA VGECANHRGIAYGLVAPLFEQAKVCANHLAHLGYARYQGSVTSTKLKVTGIDLFSAGD FIGGEGSETITLSDPIGGVYKKLVIKDDVLVGACLYGDTADGGWYFRQIRENHNVAQI RDHLMFGENALGDVGHQGQNSAASMPDTAEVCGCNGVCKGTIVKAIQEHGLFSVDEVK KHTKAASSCGSCAGLVEQILISTVGGAADVKPKSEKAICGCSDLNHGQIRKAIREHRL TSLDAAMRFMDWKTPNGCATCRPALNYYLISTWPGEAKDDPQSRLINERAHANIQKDG TYSVVPRMWGGVTNAAELRRIADVADKYQVPMVKVTGGQRIDLLGVKKDDLPAIWKDL DMPSGHAYGKSIRTVKTCVGSEFCRFGTQNSTQLGIDLEHDLFNMWSPHKVKLAVSGC PRNCAEAGIKDVGIIGVDSGWEMYIGGNGGIKTEVAEFFVKLKTAEEVREYNGAFLQL YREEAFYLERTVHYLQRVGMEHIRKAVVEDAENRKALNDRLQFALSFEQDPWKQRIEQ PQLKKEFERISLKQLENV" misc_feature complement(1926230..1928611) /gene="nirB" /locus_tag="PA1781" /note="nitrite reductase [NAD(P)H], large subunit; Region: nitri_red_nirB; TIGR02374" /db_xref="CDD:162827" gene complement(1928666..1928886) /locus_tag="PA1781.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965624" ncRNA complement(1928666..1928886) /ncRNA_class="other" /locus_tag="PA1781.1" /product="P11" /db_xref="GeneID:6965624" gene complement(1928894..1930489) /locus_tag="PA1782" /db_xref="GeneID:878606" CDS complement(1928894..1930489) /locus_tag="PA1782" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="serine/threonine-protein kinase" /protein_id="NP_250473.1" /db_xref="GeneID:878606" /translation="MVTPAPALAASKGHLLAIADGVSQCADGGLAARSSLQALALDYY ATPETWAIVQSLDRLLLAQNRWLQANGGGQPLLTTLTALVLRGTRYTLAHVGDCRAYL WRDGELLRQTSDHVWEQPHMQHVLTRALGLDQHLVVDYLEGDLEPGSQWLLVSDGVWA TLGDSGIRSILRNAEEPQRSAEALVRAAHLAGSQDNASALLVRVEAVPAGSLGDALAQ LGHWPLPPPLKPDQLFEGWRVRQLLGESRQSLLYRVEDGQGQPWLLKTLPAARADDPL ATQALLLEEWFLRRVQGRHFPELHGLAQRQHLYYLMREHPGETLAERLRNHGPLSLPE WLGLANQLLRGLGQLHRRNLLHRDLKPENLHLGRDGELRLLDFGLAWCPGLSREDPHL LPGTPSYLAPECFSGTSPSVRQDLYATGVCLYQALTGRYPYGEIEAFQHPRFGRPVPP SRYRPDLPAWIDDLLLRAVACDPAQRFETAEEWLLSLQQGEALPAAATRPLLEREPLQ TWRAIALLSLAANLALLLVWLKG" misc_feature complement(1929857..1930471) /locus_tag="PA1782" /note="Serine/threonine protein phosphatase PrpC [Signal transduction mechanisms]; Region: PTC1; COG0631" /db_xref="CDD:440396" misc_feature complement(<1928972..1929799) /locus_tag="PA1782" /note="Serine/threonine protein kinase [Signal transduction mechanisms]; Region: SPS1; COG0515" /db_xref="CDD:440281" gene complement(1930564..1931775) /gene="nasA" /locus_tag="PA1783" /db_xref="GeneID:877748" CDS complement(1930564..1931775) /gene="nasA" /locus_tag="PA1783" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nitrate transporter" /protein_id="NP_250474.1" /db_xref="GeneID:877748" /translation="MNNSFWKAGHAPTLFAAFLYFDLSFMVWYVLGPLGVQIAGDLQL STQQRAMMVATPILAGAVLRFLLGLLADRWSPKSAGILAQVIVIAALAAAWLLGVNSY AQALLLGLFLGFAGASFAVALPLASQWYPPQHQGKAMGIAGAGNSGTVLAALFAPGLA AAFGWNNVFGFALLPLVLTLLVFAMVARNAPQRPAPKAMGDYLKALGDRDSWWFMFFY SVTFGGFLGLASTLPGYFHDQYGLNPVTAGYYTAACVFAGSLMRPLGGALADRIGGIR SLLMVYTLAAICIAAVGFHLPSAMAALGLFVVAMLSLGAGNGAVFQLVPQRFHKEIGV MTGLIGMAGGIGGFCLTAGLGAIKQSTGDYQLGLWLFASLGVLAWFGLHGVKRRWRTT WGSAAVTAARV" misc_feature complement(1930735..1931742) /gene="nasA" /locus_tag="PA1783" /note="nitrite extrusion protein (nitrite facilitator); Region: 2A0108; TIGR00886" /db_xref="CDD:273322" protein_bind 1930816..1930828 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1782" /bound_moiety="AmrZ" gene complement(1932129..1932824) /locus_tag="PA1784" /db_xref="GeneID:880007" CDS complement(1932129..1932824) /locus_tag="PA1784" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250475.1" /db_xref="GeneID:880007" /translation="MIDLSTWNLTIPTEPTPQVITTQQLNNGYQSRYFQQGNDGGLVF WVPIDGSHTEDSTYPRTELRETQADGSLDNWYYWQADNELRVTMSVEKVPSKNKVIIG QIHSKSPQTDDGEPLVKLQYYYKPEEGLGRVEALVRNHPDDSYSRNVSILEQVRLGER FNYSLRVTSSGELAVRARSQDGEEDAYYQTLGSAWNDQLLYFKAGAYVNDNAGDSGEG SRVTIYHLNTAHR" misc_feature complement(1932135..1932821) /locus_tag="PA1784" /note="Alginate lyase; Region: Alginate_lyase2; pfam08787" /db_xref="CDD:400923" protein_bind complement(1933019..1933031) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1784" /bound_moiety="AmrZ" protein_bind complement(1933030..1933042) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1784" /bound_moiety="AmrZ" gene complement(1933054..1933632) /locus_tag="PA1785" /db_xref="GeneID:879976" CDS complement(1933054..1933632) /locus_tag="PA1785" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250476.1" /db_xref="GeneID:879976" /translation="MLRILLIDDTPKKVGRLRAALLESGFEVVDESGLTIDLPARVEA LRPDVILIDTESPGRDVMEQVCLVSRDQPRPIVMFTDEHDPGVMRRAIQSGVSAYIVE GIQASRLQPILDVAMARFESDQALRAQLQAREAQLAERKRIELAKGLLMKMKHCGEEE AYTLMRRQAMSRQQRLIQVAEQIIAMHDMLGG" misc_feature complement(1933057..1933632) /locus_tag="PA1785" /note="Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains [Signal transduction mechanisms, Transcription]; Region: AmiR; COG3707" /db_xref="CDD:442921" gene complement(1933649..1934857) /locus_tag="PA1786" /db_xref="GeneID:879971" CDS complement(1933649..1934857) /locus_tag="PA1786" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250477.1" /db_xref="GeneID:879971" /translation="MTDRAIRSQAWAGGSDAPEKSALDIGFMALTDSASLIVAATQGF AQPYGLTLNLRRQPSWATLRDKLLSGELDAAQCLYGLVYGVQLGLGGSAASEMAVLMG LCQNGQAINLSEPLKQAGVTSAEALLRHRRQNGARLTLAQTFPTGTHALWLNYWLASL GLHPLHDVHSVVVPPAQMVGHLQAGRIDGFCAGGPWGALAVDQGQGFTIATSQAIWPD HPEKVLGTTRAFVDAYPNTARALVMAVLDASRFIEQNAENRLGTAQLISGRDYVDAPL GAIQPRFFGRYQDGLGNAWQDPHPLRFYADGEVNRPWLSDGMWFMTQFRRWGLLREDP DYLGIARRVQQTALYRDAATALGLCLDGADMRRSTLIDGRTWDGSDPAGYARSFPIHA LAETGQGIDL" misc_feature complement(1934057..1934812) /locus_tag="PA1786" /note="NMT1-like family; Region: NMT1_2; pfam13379" /db_xref="CDD:463863" gene complement(1935035..1937644) /gene="acnB" /locus_tag="PA1787" /db_xref="GeneID:879984" CDS complement(1935035..1937644) /gene="acnB" /locus_tag="PA1787" /EC_number="4.2.1.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aconitate hydratase B" /protein_id="NP_250478.1" /db_xref="GeneID:879984" /translation="MLEAYRKHVEERAAQGVVPQPLNAEQTAGLVELLKNPPAGEEEF LLDLITNRVPPGVDEAAYVKAGFLSAIVKGEATSPLIDKQRAAELLGTMQGGYNIATL VELLDDAELANTAAEQLKHTLLMFDAFHDVAERAKKGNAAAKSVLQSWADGEWFKAKP EVPEKLTLTVFKVPGETNTDDLSPAPDAWSRPDIPLHALAMLKMARDGIEPVQPGSVG PLKQIEAVKAKGFPVAYVGDVVGTGSSRKSATNSVLWFFGDDIPFVPNKRAGGFCFGT KIAPIFYNTMEDAGALPIEFDCTNLAMGDVIDVYPYEGKVVRHDSGEVVTTFELKTPV LLDEVRAGGRIPLIVGRGLTEKARAELGLGASDLFRKPEAPADSGKGFTLAQKMVGRA CGLPEGQGVRPGTYCEPKMTTVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAA YPKPIDVKTHHTLPDFIMTRGGVSLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPIG ISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKLQPGITLRDLVHAIPYYAIQQGLL TVEKKGKKNIFSGRILEIEGLNDLTVEQAFELSDASAERSAAGCTIKLPEQAIAEYLK SNITLLRWMIGEGYGDPRTLERRAQAMEAWLAKPELLEADKDAEYAAVIEIDLADVKE PVLCAPNDPDDARLLSSVQGRKIDEVFIGSCMTNIGHFRAAGKLLDKVKGGIPTRLWL APPTKMDAHQLTEEGYYGIYGKAGARMEMPGCSLCMGNQARVQTGSTVVSTSTRNFPN RLGDATDVFLASAELAAVSSILGKLPTVEEYMAYAKDIDSMAADVYRYLSFDQIAEFR EAAANAKIPVVQA" misc_feature complement(1935041..1937644) /gene="acnB" /locus_tag="PA1787" /note="Aconitase B [Energy production and conversion]; Region: AcnB; COG1049" /db_xref="CDD:440670" gene 1938026..1938493 /locus_tag="PA1788" /db_xref="GeneID:879746" CDS 1938026..1938493 /locus_tag="PA1788" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250479.1" /db_xref="GeneID:879746" /translation="MSSQRIKTPCVGLCSTVYGDLVCRGCKRFHHEVVNWNLYDAEEK RAVWSRLEQLLAQVMAVKLEVFDAARLRLQLEQRQIRFVPEQSPYCWAYQLIARGSRL INQIEAYGVALLPEFRDWSLPDLRDAIDREFFLLSEAHYQRYIAPSFLQAIDR" misc_feature 1938026..1938199 /locus_tag="PA1788" /note="Predicted Fe-S protein YdhL, DUF1289 family [General function prediction only]; Region: YdhL; COG3313" /db_xref="CDD:442542" gene complement(1938549..1939412) /locus_tag="PA1789" /db_xref="GeneID:878755" CDS complement(1938549..1939412) /locus_tag="PA1789" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250480.1" /db_xref="GeneID:878755" /translation="MQAIRSILVVIEPDQLEGLALKRAQLIAGVTQSHLHLLVCEKRR DHSAALNDLAQELREEGYSVSTNQAWKDSLHQTIIAEQQAEGCGLIIKQHFPDNPLKK AILTPDDWKLLRFAPCPVLMTKTARPWTGGKILAAVDVGNNDGEHRSLHAGIISHAYD IAGLAKATLHVISAHPSPMLSSADPTFQLSETIEARYREACRTFQAEYGFSDEQLHIE EGPADVLIPRTAQKLDAVVTVIGTVARTGLSGALIGNTAEVVLDTLESDVLVLKPDDI IAHLEELASKE" misc_feature complement(1938582..1939400) /locus_tag="PA1789" /note="universal stress protein UspE; Provisional; Region: PRK11175" /db_xref="CDD:236871" gene 1939583..1940206 /locus_tag="PA1790" /db_xref="GeneID:879935" CDS 1939583..1940206 /locus_tag="PA1790" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250481.1" /db_xref="GeneID:879935" /translation="MTCTMLPEIDQFLACSTPAAWVEAALERQDVMLLDHKACEMKAA ATAMQLIGKYSGRLDLVNKMSRLAREELRHFEQVLAILKKRGIRVVNVSASRYASALR DLVRKQEPQRLTDTLVVGAFIEARSCERFAALVPHLDAELAKFYGGLLKSESRHFQDY LKLAYQYGDEADVERTIEVVRAKEAELISSPDNEFRFHSGLPVDLVA" misc_feature 1939592..1940179 /locus_tag="PA1790" /note="tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE); Region: MiaE; pfam06175" /db_xref="CDD:114868" misc_feature order(1939700..1939702,1939793..1939795,1939802..1939804, 1939886..1939888,1939928..1939930,1939937..1939939, 1939952..1939954,1940039..1940041,1940048..1940050, 1940060..1940062) /locus_tag="PA1790" /note="active site" /db_xref="CDD:153119" misc_feature order(1939700..1939702,1939793..1939795,1939802..1939804, 1939952..1939954,1940039..1940041,1940048..1940050) /locus_tag="PA1790" /note="dinuclear metal binding site [ion binding]; other site" /db_xref="CDD:153119" misc_feature order(1939703..1939705,1939724..1939726,1939733..1939735, 1939766..1939768,1939775..1939780,1939787..1939789, 1939796..1939798,1939805..1939810) /locus_tag="PA1790" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:153119" gene complement(1940255..1941586) /locus_tag="PA1791" /db_xref="GeneID:879958" CDS complement(1940255..1941586) /locus_tag="PA1791" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250482.1" /db_xref="GeneID:879958" /translation="MIISKGNLIKFVAAPLGVLALGFGLFNGVFFYNEAGFMTHVRTI FGDEKIVDDVGYATKWFGRATTWKKAISVQSVLVMDDNDTNPDNDGLGATIEAFPIVF LGNVDAKVESSARFRLPGGEPFLKMAQEYRNPDNFIRTALVPAIKETLQATASLMSAD DYYAGARSEFAAEFENQLNDGLYLIKRKEVRGPRGAIPHQTAILQAGTEQGAFGDNNA SQFVTEKVTDAKGIPVRKQQQFRKFGVEVVEARITNVDPNPQYKQRMVKVQQALAELA VARQNRLKEEEEKLLVTARGEKEVEAKRQETLRDQIERTTQAETDKQLAVINAEREKQ RAEIEKQTAELLRDKATVTAQATKITADAEAYAREAVIKADGALQPKLDALIAINKVW AEAAAQAPVPSVMMGAGANGAASRQDEIGQLMGVLATKAARDLALDLKVKD" misc_feature complement(1940726..>1941307) /locus_tag="PA1791" /note="core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; Region: SPFH_like; cl19107" /db_xref="CDD:473137" misc_feature complement(1940267..>1940788) /locus_tag="PA1791" /note="Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]; Region: YqiK; COG2268" /db_xref="CDD:441869" gene complement(1941720..1942442) /locus_tag="PA1792" /db_xref="GeneID:878790" CDS complement(1941720..1942442) /locus_tag="PA1792" /EC_number="3.6.1.-" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="UDP-2,3-diacylglucosamine hydrolase" /protein_id="NP_250483.1" /db_xref="GeneID:878790" /translation="MSVLFISDLHLEAERPDITRAFLSFLDERARRAEALYILGDFFE AWIGDDGMDAFQRSIAQSLRQVADGGTRIYLMHGNRDFLIGKAFCREAGCTLLPDPSV IDLYGEPVLLMHGDSLCTRDEAYMRLRRWLRNPLTLWVLRHLPLATRHKLARKLRKES RAQTRMKAVDIIDVTPEEVPRVMRGHGVRTLIHGHTHRPAEHPLDIDGQPARRIVLGD WDRQGWALEIDANGHRQAPFPL" misc_feature complement(1941723..1942442) /locus_tag="PA1792" /note="UDP-2,3-diacylglucosamine hydrolase; Provisional; Region: PRK05340" /db_xref="CDD:235420" misc_feature complement(order(1941852..1941854,1941858..1941860, 1942101..1942103,1942203..1942208,1942320..1942322, 1942413..1942415,1942419..1942421)) /locus_tag="PA1792" /note="putative active site [active]" /db_xref="CDD:277343" misc_feature complement(order(1941852..1941854,1941858..1941860, 1942101..1942103,1942206..1942208,1942320..1942322, 1942413..1942415,1942419..1942421)) /locus_tag="PA1792" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:277343" gene complement(1942447..1942944) /gene="ppiB" /locus_tag="PA1793" /db_xref="GeneID:880667" CDS complement(1942447..1942944) /gene="ppiB" /locus_tag="PA1793" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase B" /protein_id="NP_250484.1" /db_xref="GeneID:880667" /translation="MIKLHTNHGVITLKLDEEKAPETAANFKEYVKSGHYDNTVFHRV INNFMIQGGGFEPGMKQKPTRAPIKNEANNGLTNKVGSIAMARTMDPHSASAQFFINV ADNDFLNHTAPTTQGWGYAVFGEVVEGMDVVNKIKGVATTMRSGHQDVPAEDVIIEKA EIVEE" misc_feature complement(1942465..1942935) /gene="ppiB" /locus_tag="PA1793" /note="cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E. coli cyclophilin A and Streptomyces antibioticus SanCyp18. Compared to the archetypal cyclophilin Human cyclophilin A, these have reduced affinity for...; Region: cyclophilin_EcCYP_like; cd01920" /db_xref="CDD:238901" misc_feature complement(order(1942585..1942587,1942621..1942626, 1942648..1942650,1942672..1942689,1942792..1942794, 1942798..1942803,1942810..1942812,1942816..1942818)) /gene="ppiB" /locus_tag="PA1793" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238901" gene 1943067..1944737 /gene="glnS" /locus_tag="PA1794" /db_xref="GeneID:878828" CDS 1943067..1944737 /gene="glnS" /locus_tag="PA1794" /EC_number="6.1.1.18" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutamine--tRNA ligase" /protein_id="NP_250485.1" /db_xref="GeneID:878828" /translation="MSKPETTAAPNFLRQIVQADLDAGKHAKIVTRFPPEPNGYLHIG HAKSICLNFGLAQEFAGDCHLRFDDTNPAKEDQEYIDAIEADIKWLGFQWSGEVCYAS NYFDQLHAWAVELIKAGKAFVCDLGPEEMREYRGTLTEPGRNSPYRDRSVEENLDLFA RMKAGEFPDGARSLRAKIDMGSPNMNLRDPILYRIRHAHHHQTGDKWCIYPSYDFTHG QSDAIEGITHSICTLEFEDHRPLYEWFLANLPVPAQPRQYEFSRLNLNYTVTSKRKLK QLVDEGHVSGWDDPRMSTLSGYRRRGYTPESIRNFCEMIGVNRASGVVDIGMLEFSIR DHLDATAPRAMCVLKPLKVVITNYPEGQVENLELPRHPKEDMGVRVLPFGRELFIDAG DFEEVPPAGYKRLIPGGEVRLRGSYVIRADEAIKDADGNIVELRCSYDPDTLGKNPEG RKVKGVIHWVPAEGSVECEVRLYDRLFRSANPEKAEEGGSFLDNINADSLQVLAGCRA EPSLGQANPEDRFQFEREGYFVADLKDSRPGKPVFNRTVTLRDSWGQG" misc_feature 1943067..1944728 /gene="glnS" /locus_tag="PA1794" /note="glutaminyl-tRNA synthetase; Provisional; Region: PRK05347" /db_xref="CDD:235424" gene 1944747..1946129 /gene="cysS" /locus_tag="PA1795" /db_xref="GeneID:880609" CDS 1944747..1946129 /gene="cysS" /locus_tag="PA1795" /EC_number="6.1.1.16" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cysteine--tRNA ligase" /protein_id="NP_250486.1" /db_xref="GeneID:880609" /translation="MLQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSM VAFDVITRWLRHRGYDLTYVRNITDIDDKIINRANENGEPFDVLTERMIAAMHEDEAR LNILKPDQEPRATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRV EDLRIGARIEPGEAKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLG DSFDIHGGGNDLEFPHHENEIAQSEAATGKPYAKSWLHCGMITINGEKMSKSLGNFFT IREVLEKYHPEVVRYLLIASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEA AEYVERFAAAMDDDFNTAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGV LQLEPEAFLQAGAEGKVDAAEVEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDG KGGTTWRLAD" misc_feature 1944747..1946123 /gene="cysS" /locus_tag="PA1795" /note="Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: CysS; COG0215" /db_xref="CDD:439985" protein_bind complement(1945378..1945390) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(1946187..1947041) /gene="folD" /locus_tag="PA1796" /db_xref="GeneID:880636" CDS complement(1946187..1947041) /gene="folD" /locus_tag="PA1796" /EC_number="1.5.1.5" /EC_number="3.5.4.9" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase" /protein_id="NP_250487.1" /db_xref="GeneID:880636" /translation="MTAQLIDGKAIAANLRQQIAQRVTERRQQGLRVPGLAVILVGTD PASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLP AHLDASLLLERIHPDKDVDGFHPYNIGRLAQRMPLLRPCTPKGIMTLLASTGADLYGM DAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKG EWIKEGAIVIDVGINRQADGRLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTL HAAEHLHD" misc_feature complement(1946190..1947041) /gene="folD" /locus_tag="PA1796" /note="bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD; Region: PRK10792" /db_xref="CDD:236760" gene 1947320..1947396 /locus_tag="PA1796.1" /db_xref="GeneID:3240275" tRNA 1947320..1947396 /locus_tag="PA1796.1" /product="tRNA-Arg" /db_xref="GeneID:3240275" gene 1947448..1947523 /locus_tag="PA1796.2" /db_xref="GeneID:3240268" tRNA 1947448..1947523 /locus_tag="PA1796.2" /product="tRNA-His" /db_xref="GeneID:3240268" gene 1947578..1947662 /locus_tag="PA1796.3" /db_xref="GeneID:3240279" tRNA 1947578..1947662 /locus_tag="PA1796.3" /product="tRNA-Leu" /db_xref="GeneID:3240279" gene 1947729..1947804 /locus_tag="PA1796.4" /db_xref="GeneID:3240271" tRNA 1947729..1947804 /locus_tag="PA1796.4" /product="tRNA-His" /db_xref="GeneID:3240271" gene 1947994..1948215 /locus_tag="PA1797a" /db_xref="GeneID:17373355" CDS 1947994..1948215 /locus_tag="PA1797a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719747.1" /db_xref="GeneID:17373355" /translation="MSMKWTEQRLRKALKQMANNHESAAVEVMRAVERANDPKLAQRL LEVIEQMHQDADALRSIDDEIASGVIRCQ" gene complement(1948502..1950334) /locus_tag="PA1797" /db_xref="GeneID:878296" CDS complement(1948502..1950334) /locus_tag="PA1797" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250488.1" /db_xref="GeneID:878296" /translation="MFRAMHLSLLGCLLGTSGCHGLPPAPPAPSAAVGNYGEVIDYLQ RHIRREMERQDVPGLALALVDDQQLVWARGFGYADRQHRINASEHTAFHAGDLSKLLI ASATLQLAERGQLSLDAPLQDTLREFYVRSRFHADQSEADRAITFRRLLSHQSGLPGE HLPPLFGERPNSLGQLPAKVSGVWLSNPPGTQVAHSNLGYELVGAAIERNTGKHFEQH MREHLLDPLQMTRSSFARNALPQAQRAHGYSGGGRPGSASDLPVNDLWSSPVDLSRFV RMLFANGRHKERQLLRKHSVEEMFRQQNAGNALDFDCQVGLAWFLSPCGSAPLEGGIR HYEYASATPGFSAHLILLPEQRLAAIVMSNADDSGSLTASLARQAASLMLQVKQGARR PAVQPTPARAPALEVPSPEDRRQLYGRYATRQGQIRLYERRGRLYADFGEQRVELLRD TSGWLQMRKRLLGFWPVGVDSAGQLQLDVVSYGQRRILVSRRHDQTAYLGERIEPTSL PQAWTEAVGTYRVASTGRHSYLNGLSIRIEDGFLLVRGQAGGTRSGEFILQPIDSAHA VLAGSGQGLGDTFSRDFDGLNALGYRFAQQDTKARPWLQRKESP" misc_feature complement(1949198..1950217) /locus_tag="PA1797" /note="CubicO group peptidase, beta-lactamase class C family [Defense mechanisms]; Region: AmpC; COG1680" /db_xref="CDD:441286" gene complement(1950439..1951725) /gene="parS" /locus_tag="PA1798" /db_xref="GeneID:878335" CDS complement(1950439..1951725) /gene="parS" /locus_tag="PA1798" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="two-component sensor ParS" /protein_id="NP_250489.1" /db_xref="GeneID:878335" /translation="MLRLFLRLYLLLALGFAAAIFVVDHVIDAFYDSIVENYHRDAVR GQAYSLVEKLAPLDQAGRQRQLEDWRPHYGLELSLTDARQAKLTQEEQALLDKNLLVV REDFTEFISRIDAGPQLLDIKLPPEPSLTPLFTVLAYILLGVLVGIALLVWVRPHWRD LETLRLAAQRFGDGDLSSRTRIFRRSDIRTLAQHFNQMADRIESLISNQRELTNAVSH ELRTPISRLSFELEQLNKQVDAEVRHDLIEDMRADLGELEEMVSELLTYARLEHGNVG SHREIVDAASWLDSVVADVALEAEAAGVTCEISACQVEQIRIEPRFMARAVINLLRNA IRHAHSRVEIALLDQGDSCQIRVNDDGPGIPADARQKIFEPFSRLDDSRDRSTGGFGL GLAIVHRVAQWHGGYAEALETPQGGASFRLTWERPR" misc_feature complement(1950454..1951470) /gene="parS" /locus_tag="PA1798" /note="sensor protein RstB; Provisional; Region: PRK10604" /db_xref="CDD:236724" gene complement(1951726..1952433) /gene="parR" /locus_tag="PA1799" /db_xref="GeneID:878354" CDS complement(1951726..1952433) /gene="parR" /locus_tag="PA1799" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="two-component response regulator ParR" /protein_id="NP_250490.1" /db_xref="GeneID:878354" /translation="MDCPTLSKVLLVEDDQKLARLIASFLSQHGFEVRQVHRGDAAFA AFLDFKPQVVVLDLMLPGQNGLQVCREIRRVANLPILILTAQEDDLDHILGLESGADD YVIKPIEPPVLLARLRALMRRHAPLPASPESLTFGKLNIDRRRREAELEGLGIELTTM EFELLWLLASQAGEILSRDEILNQIRGIGFDGLNRSVDVCISKLRNKLKDNPREPVRI KTVWGKGYLFNPLGWEL" misc_feature complement(1951732..1952418) /gene="parR" /locus_tag="PA1799" /note="DNA-binding transcriptional regulator RstA; Provisional; Region: PRK10701" /db_xref="CDD:236738" gene 1952665..1953975 /gene="tig" /locus_tag="PA1800" /db_xref="GeneID:877637" CDS 1952665..1953975 /gene="tig" /locus_tag="PA1800" /EC_number="5.2.1.8" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="trigger factor" /protein_id="NP_250491.1" /db_xref="GeneID:877637" /translation="MQVSVESTSALERRMTVGVPAERIETEVNKRLQQTARRAKIPGF RPGKVPMSVIRQRYEASARQEAMGDLIQETFYEAVVEQKLNPAGSPSVEPKSFEKGKD LEYIATFEVFPEFTVSGLEDIKVERLQAEVSDADVDNMLDVLRKQNTRFEVVERAAQN DDQLNIDFVGKIDGEAFAGGSAKGTLLVLGSGRMIAGFEEGLVGAKAGEERVLNLTFP EDYQNLDLANKAAEFTVTVNSVAEPKLPELNEEFFALFGVKETGLDGFRAEVQKNMER ELRQAIKSKVKNQVMEGLLQANPIEVPKALIGNEVNRLRVQAVQQFGGNIKPDQLPAE LFEEQAKRRVVLGLIVAEVVKQHELKADEGRVREMIEEMASAYQEPEQVVAWYFKNEP QLNEVRSVVLEEQVVDTVLQKATVTDKQVSYEEAVKPAEAPQAA" misc_feature 1952665..1953921 /gene="tig" /locus_tag="PA1800" /note="FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]; Region: Tig; COG0544" /db_xref="CDD:440310" gene 1954069..1954710 /gene="clpP" /locus_tag="PA1801" /db_xref="GeneID:878359" CDS 1954069..1954710 /gene="clpP" /locus_tag="PA1801" /EC_number="3.4.21.92" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease proteolytic subunit" /protein_id="NP_250492.1" /db_xref="GeneID:878359" /translation="MSRNSFIPHVPDIQAAGGLVPMVVEQSARGERAYDIYSRLLKER IIFLVGQVEDYMANLVVAQLLFLEAENPEKDIHLYINSPGGSVTAGMSIYDTMQFIKP NVSTTCIGQACSMGALLLAGGAAGKRYCLPHSRMMIHQPLGGFQGQASDIEIHAKEIL FIKERLNQILAHHTGQPLDVIARDTDRDRFMSGDEAVKYGLIDKVMTQRDLAV" misc_feature 1954120..1954704 /gene="clpP" /locus_tag="PA1801" /note="ATP-dependent Clp protease proteolytic subunit; Reviewed; Region: clpP; PRK00277" /db_xref="CDD:178955" misc_feature order(1954207..1954209,1954213..1954215,1954240..1954245, 1954252..1954257,1954264..1954266,1954309..1954311, 1954330..1954332,1954342..1954344,1954351..1954353, 1954360..1954365,1954375..1954377,1954399..1954401, 1954465..1954467,1954471..1954473,1954489..1954500, 1954540..1954542,1954549..1954551,1954555..1954557, 1954561..1954563,1954630..1954632,1954636..1954638) /gene="clpP" /locus_tag="PA1801" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:132928" misc_feature order(1954408..1954410,1954483..1954485,1954630..1954632) /gene="clpP" /locus_tag="PA1801" /note="active site residues [active]" /db_xref="CDD:132928" protein_bind 1954751..1954764 /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" gene 1954815..1956095 /gene="clpX" /locus_tag="PA1802" /db_xref="GeneID:878307" CDS 1954815..1956095 /gene="clpX" /locus_tag="PA1802" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP-dependent protease ATP-binding subunit ClpX" /protein_id="NP_250493.1" /db_xref="GeneID:878307" /translation="MTDTRNGEDNGKLLYCSFCGKSQHEVRKLIAGPSVFICDECVDL CNDIIREEVQEAQAESSGHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRLNQ RDKKDDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVE NIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEG TVASVPPQGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRS QEMGKKVGEAFKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALT KQYAKLFEMEGVDLEFRPDALKAVARKALERKTGARGLRSILEGILLDTMYEIPSQQD VSKVVIDESVIDGSSQPLMIYENSEKPAKAAPEA" misc_feature 1954836..1956056 /gene="clpX" /locus_tag="PA1802" /note="ATP-dependent protease Clp, ATPase subunit ClpX [Posttranslational modification, protein turnover, chaperones]; Region: ClpX; COG1219" /db_xref="CDD:440832" gene 1956227..1958623 /gene="lon" /locus_tag="PA1803" /db_xref="GeneID:877926" CDS 1956227..1958623 /gene="lon" /locus_tag="PA1803" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="Lon protease" /protein_id="NP_250494.1" /db_xref="GeneID:877926" /translation="MKTLVELPLLPLRDVVVYPHMVIPLFVGREKSIEALEAAMTGDK QILLLAQKNPADDDPGEDGLYRMGTVATVLQLLKLPDGTVKVLVEGEQRGQVERFIEE EGHIRAAVQAIDDANVGEREAEVFTRSLLSQFEQYVQLGKKVPAEVLSSLNSIDEPSR LVDTMAAHMALKIEQKQDILEITDLSSRVEHVLALLDAEIDLLQVEKRIRGRVKKQME RSQREYYLNEQMKAIQKELGDIDEGHNEVEELKKRIDAAGLTKEAHTKATAELNKLKQ MSPMSAEATVVRSYIDWLLNVPWKAESKVRHDLAKAEDILDADHYGLEEVKERILEYL AVQKRVKKLKGPVLCLVGPPGVGKTSLAESIARATNRKFVRMALGGVRDEAEIRGHRR TYIGSMPGRLIQKMTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFND HYLEVDYDLSDVMFLCTANSMNIPAPLLDRMEVIRLPGYTEDEKVNIAAKYLIPKQVQ ANGLKKGELTFEEGALRDIIRYYTREAGVRSLERQIAKVCRKAVKEHAKLKRIQAVVS SETLENYLGVRKFRYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAVVPGKGQLTKTGS LGDVMAESITAALTVVRSRAQSLGIAADFHEKRDIHIHVPEGATPKDGPSAGIGMCTA LVSAITQIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKTVIIPEENVRDLK EIPDNIKSDLVIKPVKWIDEVLQIALQYAPEPLPDAAPEMVAKDEKREPDSKERISTH " misc_feature 1956242..1958557 /gene="lon" /locus_tag="PA1803" /note="ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]; Region: Lon; COG0466" /db_xref="CDD:440234" gene 1958759..1959031 /gene="hupB" /locus_tag="PA1804" /db_xref="GeneID:878308" CDS 1958759..1959031 /gene="hupB" /locus_tag="PA1804" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="DNA-binding protein HU" /protein_id="NP_250495.1" /db_xref="GeneID:878308" /translation="MNKSELIDAIAASADIPKAVAGRALDAVIESVTGALKAGDSVVL VGFGTFAVKERAARTGRNPQTGKPIKIAAAKIPGFKAGKALKDAVN" misc_feature 1958762..1959019 /gene="hupB" /locus_tag="PA1804" /note="histone-like DNA-binding protein HU; Region: HU; cd13831" /db_xref="CDD:259853" misc_feature order(1958774..1958776,1958783..1958788,1958795..1958797, 1958822..1958833,1958837..1958845,1958849..1958857, 1958861..1958866,1958876..1958890,1958897..1958899, 1958981..1958989,1958993..1958995,1958999..1959001, 1959011..1959016) /gene="hupB" /locus_tag="PA1804" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:259853" misc_feature order(1958915..1958917,1958921..1958926,1958930..1958932, 1958936..1958947,1958960..1958965,1958969..1958971) /gene="hupB" /locus_tag="PA1804" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:259853" gene 1959083..1959159 /locus_tag="PA1804.1" /db_xref="GeneID:3240258" tRNA 1959083..1959159 /locus_tag="PA1804.1" /product="tRNA-Asp" /db_xref="GeneID:3240258" gene 1959263..1961128 /gene="ppiD" /locus_tag="PA1805" /db_xref="GeneID:878369" CDS 1959263..1961128 /gene="ppiD" /locus_tag="PA1805" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase D" /protein_id="NP_250496.1" /db_xref="GeneID:878369" /translation="MLQNIRDNSQGWIAKTIIGVIIVLLSLTGFDAIIRATDHSNVAA KVNGDDISLNEVQQAVDMQRRQLLQRLGKDFDPSMLDDKLLKEAALKGLIERTLLLQA AKDDKFAFSDQALDQLILQTPEFQVDGKFNADRFDQVIRQMNYSRMQFRQMLGQEMLI GQLRAGLAGTGFVTDNELQSFARLEKQTRDFATLAIKADASKSSVSDDEVKAFYEGHK SEFMTPEQVVVEYVELKKSSFFDQVKVKQEDLEALYQKEIANLSEQRDAAHILIEVND KVGDEQAKAKIDEIKARLAKGEDFAALAKEFSQDIGSAATGGDLGYAGRGVYDPAFEE ALYALKQGEVSAPVKTPYGYHLIKLLGVQAPEVPSLESLKPKLEDELKKQMVEQRFVE ATKDLESSAYEAADLSQPAQEMGLKVQTSQPFGRSGGDGIAANRQIVQTAFSAEVLEE AANSGAIELDPDTVVVLRVKEHNKPKEQPLEQVAANIRERLAAEKAAEEAQKRGEALI AELREGRTSSAAGESWKVVEAASRGHEGVDPKLLQAVFRMQRPEAKDKPSFSGVTLAN GDYVVIRLNGVSEPEEAISDDEKAMYRRFLASRSGQADFAAFRRQLQDKAEVEKY" misc_feature 1959263..1961119 /gene="ppiD" /locus_tag="PA1805" /note="periplasmic folding chaperone; Provisional; Region: PRK10788" /db_xref="CDD:182731" gene complement(1961227..1962024) /gene="fabI" /locus_tag="PA1806" /db_xref="GeneID:878311" CDS complement(1961227..1962024) /gene="fabI" /locus_tag="PA1806" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="NADH-dependent enoyl-ACP reductase" /protein_id="NP_250497.1" /db_xref="GeneID:878311" /translation="MGFLTGKRALIVGVASKLSIASGIAAAMHREGAELAFTYQNDKL RGRVEEFASGWGSRPELCFPCDVADDSQIEAVFAALGKHWDGLDIIVHSVGFAPGDQL DGDFTAVTTREGFRIAHDISAYSFIALAKAGREMMKGRNGSLLTLSYLGAERTMPNYN VMGMAKASLEAGVRYLAGSLGAEGTRVNAVSAGPIRTLAASGIKSFRKMLAANERQTP LRRNVTIEEVGNAGAFLCSDLASGISGEILYVDGGFNTTAMGPLDDD" misc_feature complement(1961248..1962021) /gene="fabI" /locus_tag="PA1806" /note="Enoyl-[acyl-carrier-protein] reductase FabI [Lipid transport and metabolism]; Region: FabI; COG0623" /db_xref="CDD:440388" gene complement(1962046..1963656) /locus_tag="PA1807" /db_xref="GeneID:878351" CDS complement(1962046..1963656) /locus_tag="PA1807" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_250498.1" /db_xref="GeneID:878351" /translation="MSENILEIRDLAVEFLSGEQRQRVVEGVSFDIRQGETLALVGES GSGKSVTAHSILRLLPYSVASHPAGSIHYQGEDLLKLPERRLRGIRGNRIAMVFQEPM TSLNPLHTIEKQLAEVLALHKGLGGAKASARILELLELVGIPEPAKRLKAYPHELSGG QRQRVMIAMALACEPQLLIADEPTTALDVTVQLKILDLLKDLQARLGMSLLLITHDLN LVRRIAHRVCVMQQGRIVEQASCQELFAAPRHPYTRELLNAEPSGAPASNPPGETLLA VDDLRVWFPIRKGVFRRTVDHVKAVDGVNFELPRGQTLGIVGESGSGKSTLGLAILRL LESQGGIRFEGTRLDGLAQHDVRPLRREMQVVFQDPYGSLSPRMCVGEIVGEGLRIHR IGSEAEQEQAIIDALVEVGLDPQTRYRYPHEFSGGQRQRIAIARALVLKPALILLDEP TSALDRTVQRQVVELLRQLQGKYNLTYLFISHDLAVVKALSHQLMVVRHGKVVEQGSA EAVFASPQHPYTQQLLEAAFMAPASAEN" misc_feature complement(1962064..1963656) /locus_tag="PA1807" /note="ABC-type microcin C transport system, duplicated ATPase component YejF [Secondary metabolites biosynthesis, transport and catabolism]; Region: YejF; COG4172" /db_xref="CDD:443332" gene complement(1963658..1964677) /locus_tag="PA1808" /db_xref="GeneID:881977" CDS complement(1963658..1964677) /locus_tag="PA1808" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_250499.1" /db_xref="GeneID:881977" /translation="MRLSPINQRRWARFKSNKRGWWSLWLFLILFVGSLGAELIANDK PLVVHYDGGWYFPVFKRYPETTFGGEFPLEANYKSPYISQLIAEKDGWVLWPPIPYSY DTINYELKVPAPAPPSAENWLGTDDQARDVLARVIYGFRVSILFALTLTVLSSLIGVT VGALQGYYGGWVDLLGQRFLEVWSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSL VDVVRAEFLRGRNLEYVRAARALGMRNSAIMFRHILPNAMISTLTFMPFILTGAIGTL TSLDFLGFGLPPGAPSLGELVAQGKSNLQAPWLGISAFVVLAVMLSLLVFIGEAARDA FDPRK" misc_feature complement(1963661..1964677) /locus_tag="PA1808" /note="ABC-type microcin C transport system, permease component YejE [Secondary metabolites biosynthesis, transport and catabolism]; Region: YejE; COG4239" /db_xref="CDD:443381" gene complement(1964682..1965764) /locus_tag="PA1809" /db_xref="GeneID:878361" CDS complement(1964682..1965764) /locus_tag="PA1809" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_250500.1" /db_xref="GeneID:878361" /translation="MLSYILRRLLLIVPTLFGILLINFIIIQAAPGGPVEQMIAKLEG FDAASGGATGRISGGGGEVAVAGSQYRGAQGLDPELVKEIERMYGFDKSAPERFMIML KNYLHLDFGQSFFRDAKVTDLIIEKLPVSISLGLWSTLIMYLVSIPLGIAKAVRHGSV FDIWTSSAIIVGYAIPAFLFAILLVVLFAGGSYWDWFPLRGLTSNNFDQLSLGGKVLD YFWHLALPVTALVIGNFATITLLTKNSFLDEIGKQYVVTARAKGLTERRVLYGHVFRN AMLLVIAGLPAALLGIFFTGSLLIEVIFSLDGLGLLSFEAAMNRDYPVVFGTLFIFTL FGLVMKLISDIVYTLVDPRIDFENRE" misc_feature complement(1964685..1965764) /locus_tag="PA1809" /note="ABC-type microcin C transport system, permease component YejB [Secondary metabolites biosynthesis, transport and catabolism]; Region: YejB; COG4174" /db_xref="CDD:443333" gene complement(1965771..1967618) /locus_tag="PA1810" /db_xref="GeneID:880658" CDS complement(1965771..1967618) /locus_tag="PA1810" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_250501.1" /db_xref="GeneID:880658" /translation="MIRPRFTPLLAALLLGCCGPLLAAPKHALTLYDEPPKYPADFKH FDYVNPDAPKGGILRQADFGGFDSLNPFIGKGVSAPSLGLIYDTLAFQSQDEPFTEYG LLAEKIEKAPDNSYVRFYLRPQARFSDGTPVTAEDVVFTFETLVSKGDPMYRNYYADV DKVVAEDKLRVRFDFKHAGNRELPLILGQIAILPKHWWADRDFSKTGMEIPVGSGPYR IAKVDPGRSISYERVKDWWAKDLPVSRGLYNFDTITIDSYRDMSVALEAFKAGQYDVN LEYSAKDWATGYESPALRDGRFIKASIHNHNPVGMQGFAFNIRRPVFQDRRVRQAISL LFDFEWSNKQLFFSSYKRTNSYFENSEMAAHQLPSEAELKILEPLRGKIPDEAFDQVF QNPVNDGSGVIREQRRKAYQLLTEAGYRIENNRMVGPDGQPLSFEFMLFQANMERVIL PFKRNLAELGIDMQIRRVDVSQFVNRLRSRDFDMTSATWPQSNSPGNEQREFWHSSSA DKAGSRNFIGLKDPAIDSLVESLIQSDSRQSLIDHTRALDRVLSWGYYVVPNYYVDTW RVAYWNRFGRPKVTPLYDWGLMTWWQTSDKALPSKAQAEATQDAEPERE" misc_feature complement(1965888..1967498) /locus_tag="PA1810" /note="Methanobactin MbnE, a periplasmic binding protein of the TonB-dependent transport system, and similar proteins; Region: MbnE-like; cd08497" /db_xref="CDD:173862" gene complement(1967615..1969444) /locus_tag="PA1811" /db_xref="GeneID:878407" CDS complement(1967615..1969444) /locus_tag="PA1811" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="solute-binding protein" /protein_id="NP_250502.1" /db_xref="GeneID:878407" /translation="MRRLSFLILGLAVSLPSFAAITQSHGYAQFGTLKYPANFQHFDW TNPDAPKGGTLRLMASGSFDTLNPYTLKGTSPIGTGDFLQYGVNELNEPLMVGTGLYD PSGDEPASSYGLIAKSVEYAENRSWVVFNLRPEARFHDGRPITASDVAFSYRTLVKQG HPMYRTYLQEVKRVDILTPHRVRFVLRRSGNPLLILRLGELPVLPQHYWKDRDFRATT FTAPLGSGPYRIVEVDPGRRLVFERVKGWWGEKLPVNRGKYNFDRVVVDFYRDNGVAF EAFKAGEFDFYIEHQAKNWLNNYRFPAVLRGDVIRTEIPHQIPSQTQALFMNTRRAVF KERALRQALGEMFDFEWTNRALFSNSYLRSRSYYPNSEFAASGVPEGQEWLYLSPYRK QLPAQLFKQPFSLPTTEGRGIPRETLRHALGLLADAGWKLSGDRLLNKKGEPLRFEIL LVNPSLERILQPYRENLASIGIDARLRTVDRAQYKQRLDQFDYDMILMTLPQTLSPGL EQWQYFHSSQVKVKGSKNYAGIANPVVDAMLNRLLGAHSRDEQVAAARALDRTLLWQY YSIPNWYLNSHRLAYRNRFAFVATPPYTLGLRAWWQKNLETSR" misc_feature complement(1967684..1969333) /locus_tag="PA1811" /note="Methanobactin MbnE, a periplasmic binding protein of the TonB-dependent transport system, and similar proteins; Region: MbnE-like; cd08497" /db_xref="CDD:173862" gene complement(1969635..1971239) /gene="mltD" /locus_tag="PA1812" /db_xref="GeneID:878304" CDS complement(1969635..1971239) /gene="mltD" /locus_tag="PA1812" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="membrane-bound lytic murein transglycosylase D" /protein_id="NP_250503.1" /db_xref="GeneID:878304" /translation="MPPQTRKTPDLDALARAVRVSILLIAGALAGCQGSGQIKGEAQA KAARPGARAVDVQFNPSWLHTQPGQNAAYNDIWDRMRDGFQLQDAISTNPRIERQRLW FLSNQSFLEQSSARGSLYMHYVVERLEERNMPLELALLPVIESAYNPFALSRSNAAGL WQFIPATGQHFNLRQTNFYDGRRDITASTNAALTYLERLHDMFNGDWMLALAAYNAGE GTVSRAIERNEKLGLPTDYWNLPLPQETQDYVPKLLALSQIVMAPDSYGISLNPINNE PYFQAVRVKRGIDLSSVAALANLDEDELYQLNPAYKRRVTMDGPQQLLVPMEKAAFLT ASLDTLKPKEVTAWQQYRVRSGDSLHSIANRYRITVAELKSANRLSSNHLRKGQQLSI PGQIAGGAVKPVYQQLARQASTPARTRSYKVKNGDSLWQIARNNGVDVNDLKRWNGLD KHALKVGQTLKLQGGTQALAARKGNAAGKRDSATYYKVKQGDSMYLIAKRFNVEMKHL QRWNPRSKQALKPGQTLTLYLDTASR" misc_feature complement(1971138..1971239) /gene="mltD" /locus_tag="PA1812" /note="MltD lipid attachment motif; Region: MLTD_N; pfam06474" /db_xref="CDD:428963" misc_feature complement(1969653..1971176) /gene="mltD" /locus_tag="PA1812" /note="membrane-bound lytic murein transglycosylase D; Provisional; Region: mltD; PRK10783" /db_xref="CDD:182727" gene complement(1971317..1972093) /locus_tag="PA1813" /db_xref="GeneID:878377" CDS complement(1971317..1972093) /locus_tag="PA1813" /EC_number="3.1.2.6" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydroxyacylglutathione hydrolase" /protein_id="NP_250504.1" /db_xref="GeneID:878377" /translation="MIQIDALPAFNDNYIWLLQDATSRRCAVVDPGDAKPVEAWLAAH PDWRLSDILVTHHHHDHVGGVAALKELTGARVLGPANEKIPARDLALEDGERVEVLGL VFEIFHVPGHTLGHIAYYHPAETPLLFCGDTLFAAGCGRLFEGTPAQMHHSLARLAAL PANTRVYCTHEYTLSNLRFALAVEPDNAALRERFEEATRLRERDRITLPSEISLELST NPFLRVSENSVKKKADQRSGQQNRTPEEVFAVLRAWKDQF" misc_feature complement(1971320..1972084) /locus_tag="PA1813" /note="hydroxyacylglutathione hydrolase; Region: GSH_gloB; TIGR03413" /db_xref="CDD:274569" gene 1972195..1972956 /locus_tag="PA1814" /db_xref="GeneID:880626" CDS 1972195..1972956 /locus_tag="PA1814" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250505.1" /db_xref="GeneID:880626" /translation="MNEPQAFAQTDAEWLASINRARDWFQGPLGSLMLAEERRLLCDE LTRYFGGYLVHYGPHAELPPSTGQIQRGVRLGPPLPGVDIACEEGAWPLSEHAADVVL LQHGLDFCLSPHRLLREAARTVRPGGHLLLIGINPWSLWGIRHYFAGDALRQARCIPP SRACDWLNLLGFALEKRRFGCYRPPLASAAWQSRLARLERWGDAWQSSGAGFYLLVAR KLVVGLRPLRQSKREPRGQLVPMPVAKVSRRDSEI" misc_feature <1972384..1972638 /locus_tag="PA1814" /note="Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Region: UbiE; COG2226" /db_xref="CDD:441828" misc_feature <1972468..1972590 /locus_tag="PA1814" /note="Methyltransferase domain; Region: Methyltransf_11; pfam08241" /db_xref="CDD:462406" gene 1972959..1973405 /gene="rnhA" /locus_tag="PA1815" /db_xref="GeneID:878252" CDS 1972959..1973405 /gene="rnhA" /locus_tag="PA1815" /EC_number="3.1.26.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribonuclease HI" /protein_id="NP_250506.1" /db_xref="GeneID:878252" /translation="MTDKEQVVIYTDGACKGNPGRGGWGALLLYKGAERELWGGEPDT TNNRMELMAAIQALAALKRSCPIRLITDSEYVMRGITEWLPNWKKRGWKTASKQPVKN ADLWQALDEQVARHQVEWQWVRGHTGDPGNERADQLANRGVAELPR" misc_feature 1972974..1973402 /gene="rnhA" /locus_tag="PA1815" /note="ribonuclease H; Reviewed; Region: rnhA; PRK00203" /db_xref="CDD:178927" misc_feature order(1972992..1973003,1973091..1973099,1973106..1973108, 1973172..1973174,1973322..1973324,1973376..1973378) /gene="rnhA" /locus_tag="PA1815" /note="RNA/DNA hybrid binding site [nucleotide binding]; other site" /db_xref="CDD:260010" gene 1973470..1974210 /gene="dnaQ" /locus_tag="PA1816" /db_xref="GeneID:877654" CDS 1973470..1974210 /gene="dnaQ" /locus_tag="PA1816" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit epsilon" /protein_id="NP_250507.1" /db_xref="GeneID:877654" /translation="MRSVVLDTETTGMPVTDGHRIIEIGCVELEGRRLTGRHFHVYLQ PDREVDEGAIAVHGITNEYLKDKPRFREVANDFFEFIRGAQLIIHNAAFDIGFINNEF ALLGQQDRSDVTEYCSVLDTLLMARERHPGQRNNLDALCKRYGVDNSGRDLHGALLDA EILADVYLAMTGGQTSLSLAGSGAEGDGSGRPMVSPIRRLDPARVATPVLRANAEELA AHAARLAVIEKSAGGPSLWAQLEAPVGE" misc_feature 1973470..1974195 /gene="dnaQ" /locus_tag="PA1816" /note="DNA polymerase III subunit epsilon; Provisional; Region: PRK05711" /db_xref="CDD:235574" misc_feature order(1973488..1973499,1973503..1973508,1973623..1973628, 1973635..1973640,1973734..1973739,1973743..1973751, 1973875..1973880,1973920..1973922,1973929..1973931, 1973944..1973946) /gene="dnaQ" /locus_tag="PA1816" /note="active site" /db_xref="CDD:99835" misc_feature order(1973488..1973499,1973503..1973508,1973623..1973628, 1973635..1973640,1973734..1973739,1973743..1973748, 1973875..1973880,1973920..1973922,1973929..1973931, 1973944..1973946) /gene="dnaQ" /locus_tag="PA1816" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:99835" misc_feature order(1973488..1973490,1973494..1973496,1973749..1973751, 1973929..1973931,1973944..1973946) /gene="dnaQ" /locus_tag="PA1816" /note="catalytic site [active]" /db_xref="CDD:99835" gene complement(1974238..1974627) /locus_tag="PA1817" /db_xref="GeneID:877725" CDS complement(1974238..1974627) /locus_tag="PA1817" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250508.1" /db_xref="GeneID:877725" /translation="MRSAYRIVSDHYAASSRGDLAGMLADMDERTEWTEMAGFPLAGT YVGAAAIGAGVFQALQRDWEGFRVEIERLIDGGDSVIAVGRYAATHRRSGKSFEARVA HVWTVEDGRIRRFEQFCDTLLVDRATR" misc_feature complement(1974241..1974612) /locus_tag="PA1817" /note="Ketosteroid isomerase-related protein [General function prediction only]; Region: YesE; COG3631" /db_xref="CDD:442849" gene 1974821..1977076 /gene="ldcA" /locus_tag="PA1818" /db_xref="GeneID:878596" CDS 1974821..1977076 /gene="ldcA" /locus_tag="PA1818" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="lysine-specific pyridoxal 5'-phosphate-dependent carboxylase LdcA" /protein_id="NP_250509.1" /db_xref="GeneID:878596" /translation="MYKDLKFPVLIVHRDIKADTVAGERVRGIAHELEQDGFSILSTA SSAEGRIVASTHHGLACILVAAEGAGENQRLLQDVVELIRVARVRAPQLPIFALGEQV TIENAPAESMADLHQLRGILYLFEDTVPFLARQVARAARNYLAGLLPPFFRALVEHTA QSNYSWHTPGHGGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAE AEDRAARNFGADHTFFVINGTSTANKIVWHSMVGREDLVLVDRNCHKSILHSIIMTGA IPLYLTPERNELGIIGPIPLSEFSKQSIAAKIAASPLARGREPKVKLAVVTNSTYDGL CYNAELIKQTLGDSVEVLHFDEAWYAYAAFHEFYDGRYGMGTSRSEEGPLVFATHSTH KMLAAFSQASMIHVQDGGTRKLDVARFNEAFMMHISTSPQYGIIASLDVASAMMEGPA GRSLIQETFDEALSFRRALANVRQNLDRNDWWFGVWQPEQVEGTDQVGTHDWVLEPSA DWHGFGDIAEDYVLLDPIKVTLTTPGLSAGGKLSEQGIPAAIVSRFLWERGLVVEKTG LYSFLVLFSMGITKGKWSTLVTELLEFKRCYDANLPLLDVLPSVAQAGGKRYNGVGLR DLSDAMHASYRDNATAKAMKRMYTVLPEVAMRPSEAYDKLVRGEVEAVPIARLEGRIA AVMLVPYPPGIPLIMPGERFTEATRSILDYLEFARTFERAFPGFDSDVHGLQHQDGPS GRCYTVECIKE" misc_feature 1974884..1975249 /gene="ldcA" /locus_tag="PA1818" /note="Orn/Lys/Arg decarboxylase, N-terminal domain; Region: OKR_DC_1_N; pfam03709" /db_xref="CDD:427454" misc_feature 1975097..1977070 /gene="ldcA" /locus_tag="PA1818" /note="lysine decarboxylase; Region: PRK15399" /db_xref="CDD:185297" gene 1977100..1978455 /locus_tag="PA1819" /db_xref="GeneID:879555" CDS 1977100..1978455 /locus_tag="PA1819" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_250510.1" /db_xref="GeneID:879555" /translation="MAGGEKAGKRGMGFWTCSALVIGNMVGSGVFLLPSSLAAFGGLS LFGWLVSSTGAVLLALTFARLARVNPGAGGPYAYTRDGFGSFAGYLCAWTYWKAAWIG NAAIAVTLVGYLRVFIPALADPLLMVSVAIAAIWLCTLINLRGIGTFSVVQNLLTILK LLPLLLVGILGWFHFNPEHLAIPARSELPNMGYAQAIATTAALTLWSFIGLESATVPA DDVEDPRRTIPRATLFGTLAAAALYILSITAVQGLMPPEVLARSTSPFADAARILMGD WGYYLVAAGAVIACLGALNGWVLLQGQIPVAPARDGLFPESLGQLNKNGAPAHGLLAS GLLVTALVMVDGHGDLVDVFNVIILLGTMTGVVPYAFCTAALLQLLAVRPDEFSPRSR RQLLVIGSLGFAYSLWALYGTGQQAIFWGFLVLMAGIPMYTWRQWRNQVNGVPTLKAN D" misc_feature 1977157..1978437 /locus_tag="PA1819" /note="arginine/agmatine antiporter; Region: PRK10644" /db_xref="CDD:182613" gene complement(1978439..1979941) /gene="nhaB" /locus_tag="PA1820" /db_xref="GeneID:877826" CDS complement(1978439..1979941) /gene="nhaB" /locus_tag="PA1820" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="Na(+)/H(+) antiporter NhaB" /protein_id="NP_250511.1" /db_xref="GeneID:877826" /translation="MSSPLSQAFAQNFLGHSPRWYKLTVLAFLLLNPLLLWLAGPVTS AWVLVGEFIFTLAMALKCYPLQPGGLLVLEALLLGLATPEALYAELQHNFPVLLLLMF MVAGIYFMKDLLLLLFSRLLLGVRSKTLLSLLFCLLAALLSAFLDALTVTAVVISVAV AFFAVYHRVASGQRASEDYDPATDRQVPELHRAHLEEFRAFLRSLLMHAAVGTALGGV CTLVGEPQNLLIGHEAGWHFVEFFRQVAPVSMPVLAAGLLTCVLLEKSRRFGYGAQLP AAVRQVLAEYAASESRKRGAQQKAALLVQALAALVLIVGLALHVAEVGLIGLLVIVLI TAFTGVTDEHQIGRAFQEALPFTALLVVFFAVVAVIHQQHLFTPIIQAVLALPAERQP GMLFIANGLLSAISDNVFVATIYITEVKQALDAGHMSREHFDTLAVAINTGTNLPSVA TPNGQAAFLFLLTSSIAPLVRLSYGRMVWMALPYTLVMGGLGWWAVSHWL" misc_feature complement(1978442..1979935) /gene="nhaB" /locus_tag="PA1820" /note="Na+/H+ antiporter NhaB [Energy production and conversion, Inorganic ion transport and metabolism]; Region: NhaB; COG3067" /db_xref="CDD:442301" gene 1980165..1980977 /locus_tag="PA1821" /db_xref="GeneID:877747" CDS 1980165..1980977 /locus_tag="PA1821" /EC_number="4.2.1.17" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="NP_250512.1" /db_xref="GeneID:877747" /translation="MTEYNAFRVELADKIAHVQINRPDKINAMNQDFWREIIEIFRWV DDTDEVRVVVLSGAGKHFSSGIDLMLLAQVGSQLGKDVGRNADALRRKILELQASFNA VDNCRKPVLAAIQGYCLGGAIDLVSACDMRYSTADAQFSIKEIDIGMAADVGTLQRLP RIIGDGMMRELAYTGRMVDGEEARSIGLVNRTYADQAALMDGVFELARQIAAKSPIAI RGTKEMIRYMRDHRVDDGLEYVATWNAAMLQSADLRVAMAAHMAKQKPEFAD" misc_feature 1980165..1980974 /locus_tag="PA1821" /note="crotonase/enoyl-CoA hydratase family protein; Region: PRK06142" /db_xref="CDD:235714" misc_feature order(1980240..1980242,1980246..1980248,1980342..1980344, 1980354..1980368,1980513..1980515,1980519..1980527, 1980591..1980596,1980603..1980605) /locus_tag="PA1821" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature order(1980360..1980362,1980525..1980527) /locus_tag="PA1821" /note="oxyanion hole (OAH) forming residues [active]" /db_xref="CDD:119339" misc_feature order(1980465..1980467,1980489..1980491,1980552..1980563, 1980597..1980608,1980624..1980626,1980630..1980638, 1980642..1980647,1980660..1980665,1980669..1980674, 1980678..1980683,1980690..1980692,1980723..1980725, 1980732..1980734,1980780..1980782,1980789..1980794) /locus_tag="PA1821" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene 1981017..1982705 /gene="fimL" /locus_tag="PA1822" /db_xref="GeneID:881776" CDS 1981017..1982705 /gene="fimL" /locus_tag="PA1822" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250513.1" /db_xref="GeneID:881776" /translation="MVTGATSLSLVRDELFATMEQAEQGLEQFIAERQNGSLLQHAVE CLQQIRGTLNLIELAGAELLAQEALQLATDIPTGVSEERDGQLAALGNALYVLRRYLE NVEANRQEIPELLLPAINEVRCAAGQPALPESFFFSARLDIPRPPSTAIDHLPSEAEL GEESRRMRHMYQIGLLGLIREQNLYPSLKLMGRALARLDSLHGGVARSRLCWIGAAAI ESIVDGQLLPRKSRKQLFSRIDRELKQLLIGPAYEAPRHLLKELLYLVALSDGQGPRS REVRELHGLAPLPFTDHLLEEESQRLSGPGQSVMRSLSTAIREELAGVKDMLDLIERG VAQPDSLTNLHAQLGKLSKTLGMVGLNSAGTALQTQLPTVAAWAASGVADSPPALLRL ADAVLYVESMVGNLERGERRIIRPTPAEPGQEADAFAVHQLAEARIVVIEEAKAGLAL AKRAITAYLESNGDKLNLANVPASLQAVRGGLWFLGQERAALLVGGCADYIQQRMIET AQMPSEQMLETLADALTSLEYYLEGGAVLRPQGQPDVLDLASASVKALGLPVAA" gene 1982705..1983541 /locus_tag="PA1823" /db_xref="GeneID:880282" CDS 1982705..1983541 /locus_tag="PA1823" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="NADH pyrophosphatase" /protein_id="NP_250514.1" /db_xref="GeneID:880282" /translation="MAGEFRWQAGRPATAQVGGWVLAHCQQRFLQDDNGLLFPREWLK RQELPLLAEHGVGHWQGEPVYVLELDEPIELPGMAWAPLRQFMLHGDFDQFCMLGYAS QIGIWARHNRFCGNCGTRMQAQDHERVMQCPQCGLHQYPRLSPSMIVLVTRGDEVLLA RSPRFVPGVYSTLAGFVEAGESVEQCVVREVREEVGVEVANLEYIGSQNWPFPHSLML GFHAEYVSGEIVPQEDEIEDAQWFSLDALPPLPAQRSIARHLIDLYLARRSGAAEPVL PG" misc_feature 1982720..1983508 /locus_tag="PA1823" /note="NAD(+) diphosphatase; Region: nudC; PRK00241" /db_xref="CDD:234699" gene complement(1983509..1984288) /locus_tag="PA1824" /db_xref="GeneID:880290" CDS complement(1983509..1984288) /locus_tag="PA1824" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250515.1" /db_xref="GeneID:880290" /translation="MPFELAIDPSTLIILAVVAFLAGFIDAIAGGGGLLTIPALLTAG VPPHLALGTNKLSSTFGAATASYTFYRRKLFHPGKWRNGLLATAIGAAIGAWAAHLLP AEWLNRMLPVVVFTCGLYMLFGGTPKAPLDADAPLGRKRQWPQGLALGFYDGVAGPGT GAFWTVSSLLMYPLDLVRASGVARSMNFVSNIVALAVFIASGQVIWLLGLCMGASLMV GAYFGARTAIGGGAKFIRPVFILVVLALTARLAWQHWFSGA" misc_feature complement(1983539..1984276) /locus_tag="PA1824" /note="Cytochrome C biogenesis protein transmembrane region; Region: DsbD; cl21514" /db_xref="CDD:473893" gene 1984389..1985033 /locus_tag="PA1825" /db_xref="GeneID:881802" CDS 1984389..1985033 /locus_tag="PA1825" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250516.1" /db_xref="GeneID:881802" /translation="MQYDGLAWAFALLALLAALVAGRILFERTWFLGWLRGTCGLAFV AVAALLLVLAWDLRSYSLLKPEQPMATLSFQAEGPQRYRVLIQEGANERSVVLDGELW QLDARIFRWKGLAALIGLAPGYRLDALSGRFLALEQQSRGRRLGLSQSPLGVDLWRWL RAGEHDLFLFEPLAGRVTFLPMADKAVFAVNYGVAGLLAEPMNLAAEEALRDWR" gene complement(1985030..1985935) /locus_tag="PA1826" /db_xref="GeneID:881785" CDS complement(1985030..1985935) /locus_tag="PA1826" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250517.1" /db_xref="GeneID:881785" /translation="MADLRQFRQFVAVAEELSFRRAAERLHMAQPPLTTAIRRLEEEV GASLLERDNRIHRLTPAGRAFLDEARRTLAQAERTLAAARSAASGRRTLRLAFVDSTI NILLPRILQAFRHQHGALDFQLQEDTTAGQLEALREDRIDAGLIVLPVDRQPGLYTHL LVDGDMRVALPEGHRLARHARLRLEQLAGEPWLLFPRHYGPGMHDLIVAACAAAGFVP EVVQEARQMQTIAGLVAGGIGVALVPSLLQPLRPPGVTFRPLQGRRARIPYRLALAYR TPSELIERFRETAQALAAAPAFRMA" misc_feature complement(1985747..1985926) /locus_tag="PA1826" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(1985072..1985662) /locus_tag="PA1826" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold; Region: PBP2_LTTR_aromatics_like; cd08414" /db_xref="CDD:176106" misc_feature complement(order(1985174..1985176,1985228..1985233, 1985237..1985242,1985258..1985263,1985318..1985323, 1985423..1985425,1985558..1985560,1985564..1985566, 1985570..1985572,1985594..1985596,1985603..1985608, 1985612..1985617,1985624..1985626,1985645..1985647)) /locus_tag="PA1826" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176106" misc_feature complement(order(1985327..1985329,1985348..1985353, 1985495..1985497,1985642..1985644)) /locus_tag="PA1826" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176106" gene 1986067..1986828 /locus_tag="PA1827" /db_xref="GeneID:881733" CDS 1986067..1986828 /locus_tag="PA1827" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_250518.1" /db_xref="GeneID:881733" /translation="MHTHSPIPRTALVTGGSSGIGLAIARRLRQQGYRIALVARDSQR LQRAAAELGGVPWMAADLSRREAVEAVAAWVGDTFQGLDVLVNNAGFTRKIAATTPLA EAEREWDALLDGNLKSAFLMSLAVLPHFAEEGGRIIHIGSIAAQTGSGSPGALGYAAA KAGLHGFGVALARELGSRGITVNSVAPGYIADTRFFPGGLDPQRVAAIVGETPLGRTG RVEDIAAAVAWLASPEAGFVTGTVVSVNGGWRVGN" misc_feature 1986091..1986819 /locus_tag="PA1827" /note="NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Lipid transport and metabolism]; Region: FabG; COG1028" /db_xref="CDD:440651" gene complement(1986989..1987756) /locus_tag="PA1828" /db_xref="GeneID:881724" CDS complement(1986989..1987756) /locus_tag="PA1828" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_250519.1" /db_xref="GeneID:881724" /translation="MSKTHLFDLDGKIAFVSGASRGIGEAIAKLLAQQGAHVIVSSRK IDGCQAVADAITAEGGKATAIACHIGEMEQIQNVFAQIREQFGRLDILVNNAATNPQF CNVLETDLGAFQKTVDVNIRGYYFMSIEGGKLMKEHGGGSIINVASINGVSPGEFQGI YSVTKAAVISMTKVFAKECAQFGIRCNALLPGLTDTKFASALVKNDAIRNLALQRIPL KRVAEPSEMAGAVLYLASEASSYTTGVALNVDGGFLS" misc_feature complement(1986992..1987747) /locus_tag="PA1828" /note="SDR family oxidoreductase; Region: PRK07035" /db_xref="CDD:180802" misc_feature complement(order(1987166..1987171,1987175..1987186, 1987262..1987264,1987274..1987276,1987313..1987321, 1987400..1987402,1987466..1987474,1987550..1987558, 1987625..1987633,1987688..1987699,1987703..1987705)) /locus_tag="PA1828" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:212491" misc_feature complement(order(1987262..1987264,1987274..1987276, 1987313..1987315,1987397..1987399)) /locus_tag="PA1828" /note="active site" /db_xref="CDD:212491" gene complement(1987781..1988851) /locus_tag="PA1829" /db_xref="GeneID:881524" CDS complement(1987781..1988851) /locus_tag="PA1829" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250520.1" /db_xref="GeneID:881524" /translation="MSLTDQSTRIRAGEELDAAVIDPYLKAHIPGLEGTPKISQFPGG ASNLTYLIEYPRQEFVLRRPPFGHKAKSAHDMGREYRILNQLNAGFPYCPKAYLYCTD ESVIGAEFYVMERVKGIILRAELPPELNLDEQQTRSLCKSFIDKFVELHNVDYAACGL ADLGRPDGYVQRQIAGWTDRYEKALTPDAPLWEPVKAWLKDKQPADHHKPGIVHNDYR FDNVILDPENPMQIIGVLDWELATLGDPLMDLGNTLAYWVEAGDPAPVQLTRRQPSHL PGMLTRREFADYYAERAGIPPIDNLDFYYTYGLFRLAGIVQQIYYRYYHGQTQDKRFA QFVQMNKLLEQMSLQAIERSRL" misc_feature complement(1987973..1988740) /locus_tag="PA1829" /note="N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins; Region: ACAD10_11_N-like; cd05154" /db_xref="CDD:270703" misc_feature complement(order(1988075..1988077,1988084..1988089, 1988132..1988134,1988141..1988146,1988183..1988185, 1988189..1988194,1988198..1988200,1988204..1988206, 1988504..1988515,1988570..1988572,1988666..1988668, 1988672..1988674,1988705..1988707,1988714..1988722, 1988729..1988731)) /locus_tag="PA1829" /note="putative active site [active]" /db_xref="CDD:270703" misc_feature complement(order(1988141..1988146,1988183..1988185, 1988189..1988194,1988204..1988206,1988504..1988515, 1988570..1988572,1988666..1988668,1988672..1988674, 1988705..1988707,1988717..1988719,1988729..1988731)) /locus_tag="PA1829" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270703" misc_feature complement(order(1988075..1988077,1988084..1988089, 1988132..1988134,1988141..1988143,1988189..1988191, 1988198..1988200,1988204..1988206,1988714..1988722)) /locus_tag="PA1829" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:270703" gene complement(1989109..1989423) /locus_tag="PA1830" /db_xref="GeneID:881929" CDS complement(1989109..1989423) /locus_tag="PA1830" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250521.1" /db_xref="GeneID:881929" /translation="MTTVADIVSTMKSKFNASAAAGLDLVFQFNIEDGDNHYLVVKDG TCEVVQGDAENPNVTLIMDSETLKGITSGETDGMQAFMAGKLRAEGDMMLAMKLGELF PV" misc_feature complement(1989115..1989411) /locus_tag="PA1830" /note="Putative sterol carrier protein, contains SCP2 domain [Lipid transport and metabolism]; Region: SCP2; COG3255" /db_xref="CDD:442486" gene complement(1989484..1990194) /locus_tag="PA1831" /db_xref="GeneID:877598" CDS complement(1989484..1990194) /locus_tag="PA1831" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250522.1" /db_xref="GeneID:877598" /translation="MGSIYLIRHGQASFGADDYDVLSPTGIRQAEILGDHLLNLGVRF DRVLSGGLRRQQHTARAALERLESSGLATPELEVDPAFNEFEADAVIRAHLPDLLDEQ PEALHILRHAAEHRAEFQRLFSTIIARWVSGNHEKDGLESWQEFLDKVHDGLRRLLAQ ASGKDRVAVFTSGGTITALLQLIVGVPPLKAFELNWQIVNTSLTRLRFRGEEVSLASF NSHVHLELLKAPELITYR" misc_feature complement(1989538..1990194) /locus_tag="PA1831" /note="Broad specificity phosphatase PhoE [Carbohydrate transport and metabolism]; Region: PhoE; COG0406" /db_xref="CDD:440175" gene 1990428..1991453 /locus_tag="PA1832" /db_xref="GeneID:880624" CDS 1990428..1991453 /locus_tag="PA1832" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="protease" /protein_id="NP_250523.1" /db_xref="GeneID:880624" /translation="MEFIAEYAGFLARTVTVLAAIIVVLVVIVALRGRGRRGAGGHLD VQKLNDFYKDLRERVRHSVLDKASLKALRKEESKAAKQAKKHPEQKSRVYVLDFDGDI KASATEQLRHEVTAVLSMAGKDDEVVLRLESGGGMVHGYGLAASQLARIRQAGVPLTV CVDKVAASGGYMMACIGDRILSAPFAILGSIGVVAQLPNVHRLLKKHDIDFEVLTAGE YKRTLTVFGENTEKGREKFQEDLEVTHELFKNFVAHYRPQLNMDEIATGEVWLGQAAL GKLLVDELKTSDEYLAEQARERDVYQVQFVERKSLQERVGLAASVVIDRVLVTWWGRL NQQKFWQ" misc_feature 1990434..1991420 /locus_tag="PA1832" /note="putative inner membrane peptidase; Provisional; Region: PRK11778" /db_xref="CDD:236978" gene 1991512..1992504 /locus_tag="PA1833" /db_xref="GeneID:882003" CDS 1991512..1992504 /locus_tag="PA1833" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_250524.1" /db_xref="GeneID:882003" /translation="MAVFKALWVTEAPHGVYETQVVERDTGDLPAGDVLIRVQYSSLN YKDALSASGNRGVTRKYPHTPGIDAAGVVAESSVAEFAAGDEVIVTGYDLGMNTAGGF GQYIRVPAAWVIKRPQGLSLREAMILGTAGLTAALCVEKLERSGLRPDHGSVLVTGAS GGVGSIAVELLAKLGYTVAAATGKLEQAEFLNRLGAKQILDRATVADGVDKPLLKEQW AGAVDTVGGDILFNVVKSLQYGGSVACCGLTAGAGFKASVLPFILRGVNLLGVDSVEL PLVVKASMWDKLSLQWKLDNLEEVAREIALEELPGAINQILAGKLVGRVLVNLG" misc_feature 1991521..1992498 /locus_tag="PA1833" /note="Yhdh and yhfp-like putative quinone oxidoreductases; Region: MDR_yhdh_yhfp; cd05280" /db_xref="CDD:176183" misc_feature order(1991641..1991646,1991899..1991904,1991911..1991913, 1991983..1991985,1991989..1992000,1992055..1992063, 1992115..1992117,1992181..1992186,1992247..1992261, 1992322..1992333,1992457..1992459,1992472..1992474) /locus_tag="PA1833" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:176183" misc_feature order(1992145..1992147,1992226..1992228,1992244..1992255, 1992271..1992273,1992277..1992288,1992292..1992300, 1992307..1992327,1992334..1992339) /locus_tag="PA1833" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:176183" gene complement(1992491..1993366) /locus_tag="PA1833a" /db_xref="GeneID:17373356" CDS complement(1992491..1993366) /locus_tag="PA1833a" /codon_start=1 /transl_table=11 /product="alpha/beta hydrolase" /protein_id="YP_008719748.1" /db_xref="GeneID:17373356" /translation="MNPPQPRLIDNGNGHPLASHWYRPAGEPRGYLLIVPAMGVEQRF YAPFAAWLAERGYLAITFDYLGMGQSRNGSLRGLEVDVLGWARHDCSAMLAAALAESG SKPLYWIGHSLGGQILPFVEGRERIERVFSIASGSGYWKENSPRLRNKVWLFWYLVAP LLTPLLGYFPGRRLGMVGDLPRGVIEQWRRWCLHPQYALADGEAIRRAFSAVRTPIVS LSFTDDEMMSRRSIESLLGFYREAPKTAWRIAPEEIGARHIGHFGFFRPQFAESLWAG YLLPELGSGNALSRG" misc_feature complement(1992542..1993360) /locus_tag="PA1833a" /note="Predicted alpha/beta hydrolase [General function prediction only]; Region: COG4757" /db_xref="CDD:443790" protein_bind complement(1993186..1993198) /locus_tag="PA1833a" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(1993461..1993898) /locus_tag="PA1835" /db_xref="GeneID:878061" CDS complement(1993461..1993898) /locus_tag="PA1835" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250526.1" /db_xref="GeneID:878061" /translation="MSQMMQMYQQVGPAQFSAMIGQFAPYFASIAPQFVELRPGYAEV TFPKRREVLNHIGTVHAIALCNAAELAAGTMTDASIPAGHRWIPRGMTVEYLAKATGD VRAVADGSQIDWQATGNLVVPVVAYVDDKPVFRAEITMYVSQA" misc_feature complement(1993473..1993859) /locus_tag="PA1835" /note="Domain of unknown function (DUF4442); Region: DUF4442; pfam14539" /db_xref="CDD:434027" misc_feature complement(order(1993605..1993616,1993635..1993637, 1993722..1993724)) /locus_tag="PA1835" /note="CoenzymeA binding site [chemical binding]; other site" /db_xref="CDD:239527" misc_feature complement(order(1993614..1993616,1993620..1993634, 1993704..1993706,1993713..1993715,1993719..1993721)) /locus_tag="PA1835" /note="subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:239527" misc_feature complement(order(1993635..1993637,1993677..1993682, 1993689..1993694,1993716..1993718)) /locus_tag="PA1835" /note="PHB binding site [active]" /db_xref="CDD:239527" gene 1994021..1994602 /locus_tag="PA1836" /db_xref="GeneID:880628" CDS 1994021..1994602 /locus_tag="PA1836" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250527.1" /db_xref="GeneID:880628" /translation="MGRSSRKDEILQAALACFSEHGVDATTIEMIRDRSGASIGSLYH HFGNKERIHGELYLAGIGQYAALLEAGFARARSAEETVRLLVTSYIDWVVANPDWARF ILHSRGRVEAGELGERLRADNQAHFARIHAALAGYRAEGLFREMPDDCFASVVIGPAH DLARQWLAGRTRVALADCRELLAQVAWDSVRAA" misc_feature 1994027..1994464 /locus_tag="PA1836" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene complement(1994667..1995164) /locus_tag="PA1837" /db_xref="GeneID:880640" CDS complement(1994667..1995164) /locus_tag="PA1837" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250528.1" /db_xref="GeneID:880640" /translation="MQRIIKDRQVVDDRWHLLPKDATLESVPNSDDVIIPLALWLEHG PALRGRDGGLGVWLDADEEPESIAGDLDRFQVIAVNFPAFTDGRGFSSARLLRERYGY KGEIRAIGDVLRDQLFFMRRCGFDAYAIRADRSPEDALASLDDFSEVYQTSVEQPLPL FRRRG" misc_feature complement(1994673..1995164) /locus_tag="PA1837" /note="Uncharacterized conserved protein, DUF934 family [Function unknown]; Region: COG3749" /db_xref="CDD:442963" gene complement(1995148..1996806) /gene="cysI" /locus_tag="PA1838" /db_xref="GeneID:878581" CDS complement(1995148..1996806) /gene="cysI" /locus_tag="PA1838" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="sulfite reductase" /protein_id="NP_250529.1" /db_xref="GeneID:878581" /translation="MYVYDEYDQRIVEDRVKQFRDQTRRYLAGELTGEEFRPLRLQNG LYIQRYAPMLRIAVPYGLLSSRQLRKLAQIARDYDKGYAHISTRQNVQFNWPELEDVP EILAELATVQMHAIQTSGNCIRNTTTDQFAGVARDELVDPRPWCEIIRQWSTFHPEFA HLPRKFKIAVNGAVSDRAAIEVHDIGLEAVKNEAGELGFRVSVGGGLGRTPIVGSFIN EFLPWQHLLGYLDAILRVYNRYGRRDNKYKARIKILVKALTPEVFAERVEAEWANLKD GPSTLTEAEVQRVAAHFVDPAYKALDDLDESLARLDAEHPGFARWRARNTFAHKKPGY VAVTLSLKPTGTAPGDVTDKQLEAIADLADRYSFGEVRNSHNQNIILADVEQGELFAL WGELRELGFATPNVGLLTDIICCPGGDFCSLANAKSIPIAEAIQRRFDNLDYLFDIGD IDLNISGCMNACGHHHVGHIGILGVDKKGAEFYQVSLGGSSARDASLGQILGPSFAQE QMADVIDKIIQVYVERRTEEEPFIDTFRRIGIDPFKERVYAANH" misc_feature complement(1995157..1996806) /gene="cysI" /locus_tag="PA1838" /note="Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism]; Region: CysI; COG0155" /db_xref="CDD:439925" gene complement(1997217..1997444) /locus_tag="PA1837a" /db_xref="GeneID:17373357" CDS complement(1997217..1997444) /locus_tag="PA1837a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719749.1" /db_xref="GeneID:17373357" /translation="MGIETEEPNQKPPTFWQMLHSVMAAAFGVQSGRNRARDFTHGKP VHFIMLGLLFTLVFVLLLAGIVKLVLSLSGL" misc_feature complement(1997235..1997402) /locus_tag="PA1837a" /note="Protein of unknown function (DUF2970); Region: DUF2970; pfam11174" /db_xref="CDD:463234" gene complement(1997509..1998549) /locus_tag="PA1839" /db_xref="GeneID:880671" CDS complement(1997509..1998549) /locus_tag="PA1839" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="RNA methyltransferase" /protein_id="NP_250530.1" /db_xref="GeneID:880671" /translation="MRSQDLHQRLADLGAKPLHCGRIVRAWLQGRALDACTARQRAED FLPLGVRHGLPQVAAELEGIARLHSEHPASDGSSRLLVELADRQMVESVLLPRGGLCV STQVGCAVGCVFCMTGRSGLLRQVGSLEMVAQVVLARRRRAVKKVVFMGMGEPAHNLD NVLEAIDLLGTDGGIGHKNLVFSTVGDPRVFERLPRQRVKPALALSLHSTRAELRRQL LPKAPPLSPEELVEAGEAYARRVDYPIQYQWTLLEGINDSLEEMDGILRLLKGRFAVM NLIPYNSMDGDAYRRPSGERIVELVRYLHSRGVLTKVRNSAGQDIDGGCGQLRARATQ GTAERRIPARQA" misc_feature complement(1997512..1998549) /locus_tag="PA1839" /note="RNA methyltransferase; Region: PRK14464" /db_xref="CDD:184691" misc_feature complement(order(1997707..1997712,1997800..1997802, 1997932..1997934,1997995..1998003,1998088..1998093, 1998097..1998099,1998205..1998210,1998214..1998216, 1998220..1998222,1998226..1998228)) /locus_tag="PA1839" /note="FeS/SAM binding site [active]" /db_xref="CDD:100105" gene 1998587..1998949 /locus_tag="PA1840" /db_xref="GeneID:880616" CDS 1998587..1998949 /locus_tag="PA1840" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250531.1" /db_xref="GeneID:880616" /translation="MAGADVLSLRSAPPQQRNRSMKFVHQREHLNEDDIVVIECSQQC NIRLMNDANFRSFKNGGRHSYHGGAFDRFPAKIKVPSTGFWNITIDTVTRRPISVTRK PNFKWSIKFVRRSGSQFT" misc_feature 1998647..1998871 /locus_tag="PA1840" /note="Domain of unknown function (DUF1883); Region: DUF1883; pfam08980" /db_xref="CDD:430353" gene 1998963..1999460 /locus_tag="PA1841" /db_xref="GeneID:880753" CDS 1998963..1999460 /locus_tag="PA1841" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250532.1" /db_xref="GeneID:880753" /translation="MSAKMDEQALLALLRELAIDSQRVEHPAIASIEEYYAQGIELPD QGIKNLFLRNRKGTRHYLVLLDERKEADLPGIAEQIGESRLSFASVERLREYLGVELG CVTPFALVNDPQHRVEVLLDDAIRQDQLLGFHPLVNTATECIRYADLLAFLAHTGHEP RLIRA" misc_feature 1999017..1999454 /locus_tag="PA1841" /note="Predicted aminoacyl-tRNA deacylase, YbaK-like aminoacyl-tRNA editing domain [General function prediction only]; Region: ProX; COG3760" /db_xref="CDD:442974" gene complement(1999512..1999874) /locus_tag="PA1842" /db_xref="GeneID:880647" CDS complement(1999512..1999874) /locus_tag="PA1842" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250533.1" /db_xref="GeneID:880647" /translation="MKFLTPEQMEKPRKRRLRKKLRLGEFQEFGFSFELTYDRNALSH DDALDHLIDFVEAQGWVFGGGGSPEQAEISGYLCLARVGSLDEADRESARLWLEAQPW CKTFEVGPLSDCWHNFFE" misc_feature complement(1999521..1999805) /locus_tag="PA1842" /note="Uncharacterized conserved protein YggL, DUF469 family [Function unknown]; Region: YggL; COG3171" /db_xref="CDD:442404" gene complement(1999889..2003593) /gene="metH" /locus_tag="PA1843" /db_xref="GeneID:880631" CDS complement(1999889..2003593) /gene="metH" /locus_tag="PA1843" /EC_number="2.1.1.13" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="B12-dependent methionine synthase" /protein_id="NP_250534.1" /db_xref="GeneID:880631" /translation="MSSPLTDRSARLQALQHALRERILILDGGMGTMIQSYKLEEADY RGERFADWPSDVKGNNDLLLLSRPDVIQAIEKAYLDAGADILETNTFNATQVSQADYG MQSLAYELNVEGARLARQVADAKTAETPDKPRFVAGVLGPTSRTCSISPDVNNPGYRN VTFDELVENYVEATRGLIEGGADLILIETIFDTLNAKAAIFAVQGVFEELGVELPIMI SGTITDASGRTLSGQTTEAFWNSVRHARPISVGLNCALGAKELRPYIEELSTKADTHV SAHPNAGLPNAFGEYDESPAEMAVVVEEFAAAGFLNIVGGCCGTTPAHIEAIAKAVAK YPPRAIPEIPRACRLSGLEPFTIDRSSLFVNVGERTNITGSAKFARLIREENYAEALE VAQQQVEAGAQVIDINMDEGMLDSKAAMVTFLNLIASEPDISRVPIMIDSSKWEVIEA GLKCIQGKGIVNSISMKEGVEAFKHHARLCKRYGAAVVVMAFDEDGQADTQARKEEIC KRSYDILVDEVGFPPEDIIFDANIFAIATGIEEHNNYAVDFINACAYIRDNLPYALSS GGVSNVSFSFRGNNPVREAIHSVFLYYAIRNGLTMGIVNAGQLEIYDEIPKALRDRVE DVVLNRTPEATEALLAIADDYKGGGAVKEAEDEEWRSYSVEKRLEHALVKGITTWIVE DTEECRQQCARPIEVIEGPLMSGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPF IEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDVVDLGVMVPAEKILQT AIAEKCDIIGLSGLITPSLDEMVHVAKEMQRQNFQLPLMIGGATTSKAHTAVKIDPQY SNDAVVYVTDASRAVGVATSLLSKELKADYVARTRADYAVVRERTANRSARTERLSYE QAIANKPAFDWAGYQAPTPSFTGVRVLDEIDLAVLAEYIDWTPFFISWDLAGKYPRIL TDEVVGEAATSLFNDAQAMLKKLIDEKLIKARAVFGFWPANQVEHDDLEVYGADGETL ATLHHLRQQTIKPDGKPNLSLADFVAPKESGVRDYIGGFITTAGIGAEEVAKAYEAKG DDYNSIMVKALADRLAEACAEWLHERVRKEYWGYARDEHLDNEALIKEQYVGIRPAPG YPACPDHTEKGTLFELLDPQGLSGVSLTEHYAMFPAAAVSGWYFAHPQAQYFAVGKID KDQVERYSQRKGQEASVSERWLAPNLGYDD" misc_feature complement(1999901..2003578) /gene="metH" /locus_tag="PA1843" /note="B12-dependent methionine synthase; Provisional; Region: metH; PRK09490" /db_xref="CDD:236539" gene complement(2003868..2004332) /locus_tag="PA1844" /db_xref="GeneID:880830" CDS complement(2003868..2004332) /locus_tag="PA1844" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250535.1" /db_xref="GeneID:880830" /translation="MDSLDQCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVP MPRGNANAMVDGLEQSWTKLASGAEAAQKAAQGFLVIAGLKGRTYGHVAVVISGPLYR QKYPMCWCGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSLASCSLPRAS" misc_feature complement(2004045..>2004245) /locus_tag="PA1844" /note="Cell wall-associated hydrolase, NlpC_P60 family [Cell wall/membrane/envelope biogenesis]; Region: NlpC; COG0791" /db_xref="CDD:440554" gene complement(2004374..2004892) /locus_tag="PA1845" /db_xref="GeneID:880643" CDS complement(2004374..2004892) /locus_tag="PA1845" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250536.1" /db_xref="GeneID:880643" /translation="MKLLAGSFAALFLSLSAQAADCTFTQLEIVPQFGSPNMFGGEDE HVRVMFSNEDPNDDNPDAFPEPPVYLADRDSGNDCRIEDGGIWSRGGVFLSQDGRRVL MHEFSGSSAELVSYDSATCKVVHREDISGQRWAVDKDGLRLGQKCSGESVDSCAKIVK RSLAPFCQTAKK" gene 2005254..2007542 /gene="cti" /locus_tag="PA1846" /db_xref="GeneID:880800" CDS 2005254..2007542 /gene="cti" /locus_tag="PA1846" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cis/trans isomerase" /protein_id="NP_250537.1" /db_xref="GeneID:880800" /translation="MLPRPLVGLAFVLSSFIQSVSAAEISYSRDVQPIFTAKCVACHA CYDSPCQLNLSSAEGAQRGANQLPVYDGTRTKAQETTRLYLDAHGADAWRRKDFWSVL EPQDGQAALMARMLELGHSQPLQPNAKIPEGLDISINRANQCPTPASIDAFIRKNPGS GMPFAVAGLSDDEYATLQKWLAAGAPVDQQPLRPTAAEARQVASWERFLNQPGAKQSL VSRWLYEHLFLAHLYFPEQGAPGHFFQLVRSRTPSGQPIDPIPTRRPNDDPGNSFYYR LWPIQGVIVHKTHITYPLTAKKLERVQELFFGTQWNTDKVPGYGVQSRANPFATFAAI PPRARYQFMLDNAEYFTRTFIRGPVCRGQIATDVIRDNFWVVFQDPEQDLFVTDANFR AQSEPLLALPGQIDELKNLLGLWSAYRDKRNEYEDLRQDVYADAPPPTWNTIWHGNDN ALLSIFRQFDSASVRKGLLGEVPQTLWLMDYPLFERTYYGLVVNFDVFGNVSHQAQTR LYFDLIRNGAEQNFLRLMPVDARQPLLDDWYQNSGKLKMWMDYQAFDDDTPSALGLPE KQPKKAFAEELLRRYGDLNARPDPINRCLDGNCYRPGIDRELQDAEQAFSRLVSRPAA GLKVIERFPEASMLRIRTSSGKREVYTVLRNRAHSNVAFMLGESLRYQPGLDTLTIYP GVLSSYPNFMFDLPATDAEAFVGALEAAKSGEDFDKVVERWGVRRSNPQFWSYFHDLE AYIRETEPVEAGALDMNRYENL" misc_feature 2005485..2007533 /gene="cti" /locus_tag="PA1846" /note="Fatty acid cis/trans isomerase (CTI); Region: CTI; pfam06934" /db_xref="CDD:429196" gene 2007665..2008249 /locus_tag="PA1847" /db_xref="GeneID:880675" CDS 2007665..2008249 /locus_tag="PA1847" /codon_start=1 /transl_table=11 /product="Fe/S biogenesis protein NfuA" /protein_id="NP_250538.1" /db_xref="GeneID:880675" /translation="MSAITITEAAQAYLAELLEKQSTPGIGIRIFITQPGTQYAETCI AYCKPGEEKVEDTAIALKDFTAWIDAVSEPFLEDAVVDYATDRMGGQLTIKAPNAKVP MVNEDSPITERINYYLQTEINPGLASHGGQVSLVDVVEDNIAVLRFGGGCQGCGMVDM TLKDGVEKTLIERIPELKGVRDVTDHSNKENAYY" misc_feature 2007674..2008246 /locus_tag="PA1847" /note="IscR-regulated protein YhgI; Region: YhgI_GntY; TIGR03341" /db_xref="CDD:132384" gene complement(2008308..2009477) /locus_tag="PA1848" /db_xref="GeneID:880819" CDS complement(2008308..2009477) /locus_tag="PA1848" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_250539.1" /db_xref="GeneID:880819" /translation="MLLRNPTLLLLFCGQALYWSCSLIGITLTALVGVQLAPLNSLAT LPLALLVLGNLLAVQPLSHFMQRHGRRPGLMLGAGGGVLGGLVCAAGVWTGDFLWFCL GALGIGVYQASAMYYRFAALEAVDAGRKGRASAYVLAGGVLAALLAPSLALWSRNALA QPFVGAYLLIAVLALAGLLLMALLREGQAPRPARLAWRDIGGLLRRPVVRAAIACTAT GHGLMILIMNATPLAMSFCGLPLEQSSRVIQWHVLGMFLPAFFAGPLVDRIGNRRVAL LGAFLLAASAGIALDGQSVTHFLLSSLALGSGWNLMLIAGTTLLGEGHAESERGAAQG LMEQGNSLVAALMSFGSGALITSLGWNAVNLLVWPALLVALALLWPVRRTRTLSR" misc_feature complement(2008440..>2008910) /locus_tag="PA1848" /note="Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism]; Region: AraJ; COG2814" /db_xref="CDD:442063" gene complement(2009482..2009724) /locus_tag="PA1849" /db_xref="GeneID:880644" CDS complement(2009482..2009724) /locus_tag="PA1849" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250540.1" /db_xref="GeneID:880644" /translation="MLELRPNCECCDRDLPGDSGDALICTFECTFCRDCATVRLGGQC PNCGGELLARPRRPRDALARHPASSRRVVRPGGCPE" misc_feature complement(2009485..2009724) /locus_tag="PA1849" /note="Uncharacterized conserved protein, DUF1272 domain [Function unknown]; Region: COG3813" /db_xref="CDD:443025" gene complement(2009747..2010751) /locus_tag="PA1850" /db_xref="GeneID:882070" CDS complement(2009747..2010751) /locus_tag="PA1850" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250541.1" /db_xref="GeneID:882070" /translation="MPEPRLIACLIYPDVMSLDVTGPLQVFASANVERQRQGLPPFYR IQVLGERSEAVPSSAGIRICADLAWRDCPPESLDTLLVPGGLGVEAQTRNADLLAWLK AAEPCIRRLGSVCSGALILAAAGVLDGRPATTHWADVATLRQGFPGVHVQGDRLHTYD PRCRDGDAHIFTSAGVTAGIDLALALVEADLGRSLALSVARRLVMFLKRPGGQAQFSA WLTPEPSRTPRLAALLEWIPANLAGDLSLEALADQACMSPRTLSRVFLQELGVAPGRY VERVRLEAARALLQDAQASIATVSRLCGFGHPENLRRTFHKHLSVSPQEYAERFGMLA " misc_feature complement(2009759..2010739) /locus_tag="PA1850" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" protein_bind complement(2010911..2010923) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 2011000..2012205 /locus_tag="PA1851" /db_xref="GeneID:882094" CDS 2011000..2012205 /locus_tag="PA1851" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250542.1" /db_xref="GeneID:882094" /translation="MLARDSLVQAGLPDNPYARQLRNGFRWLRFEKELENEFREFLSW NSLMQRRAAIGVAFLIWALFIVADWMMVDIRLHPSLFEQLLGVRLGMIGLLLVVWPAA FLPSLRKVGDAIAPYCLLLINLAVLACDVLFEWHGVPRFTQLGATLGILAVFFPLGLA FWACVRLALLCLALNLAVFLLFGGEENLRTNLLNTLYNGLVVLICSFALYLQDYAQRE QFLGRRLLGMMAEQDSLTGLVNRRYYELLAQRALEQGAREEKGVALILVDVDDFKAYN DHYGHPAGDAALRQLGVVLRQGARRPLDIAARLGGEEFAVLLYDSEEGNTLAIAERLR QAVEALGIEHLGSSAGPCLTISLGVAYSTSGMGLDALYREADRALYEAKDAGRNAVRV AFRQHDRLE" misc_feature 2011000..>2012175 /locus_tag="PA1851" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" misc_feature 2011696..2012172 /locus_tag="PA1851" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(2011801..2011803,2011933..2011935) /locus_tag="PA1851" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(2011816..2011818,2011825..2011830,2011840..2011842, 2011852..2011854,2011921..2011923,2011927..2011938) /locus_tag="PA1851" /note="active site" /db_xref="CDD:143635" misc_feature order(2011909..2011911,2011993..2011995) /locus_tag="PA1851" /note="I-site [active]" /db_xref="CDD:143635" gene complement(2012255..2012530) /locus_tag="PA1852" /db_xref="GeneID:882101" CDS complement(2012255..2012530) /locus_tag="PA1852" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250543.1" /db_xref="GeneID:882101" /translation="MNATLRFNEALLITGRAFQPYQCVAWSELGSDGGLSLSVVDRTG TRLLGRARIPSSAYSDPEQLAGLLQQAREELSHNGYNLQDWSMPSQG" gene 2012815..2013678 /locus_tag="PA1853" /db_xref="GeneID:880719" CDS 2012815..2013678 /locus_tag="PA1853" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250544.1" /db_xref="GeneID:880719" /translation="MDIDLARTFLEIARSGSFVAAAERLHLTQTAVTARIQNLEGQLG CRLFVRNRAGARLTADGEHFLGYASQLVQTWDAARRDLPLPDGFRNLLNLGGEVSLCN PLLLNWMRRLREAIPGHAVRVEIGQGADLLKQLEQGALDAALVYQPEYWPGLQVEQLL EEKLVMVRSVLSAEPYLYVDWGPDFRSQHDAALPDRAKAALACNLGPLALQYIMQNGG SGYFRTRVVSSYLDGGTLQRVEQAPEFAYPTYLVYSRERLSPTLRHAFQLLREVVRED SDWSQRWDYVI" misc_feature 2012815..2013639 /locus_tag="PA1853" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene complement(2013666..2014823) /locus_tag="PA1854" /db_xref="GeneID:882032" CDS complement(2013666..2014823) /locus_tag="PA1854" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250545.1" /db_xref="GeneID:882032" /translation="MNDSPSTAVRTWLKGFRPLTLNARPRDCLRAGLGACIGALAAVF ACQALFGSELALRLAAPLGASAVLLFALASSPLAQPWSMLGGNLVAALAGGLSAYWFG HDLAPALVGMALGMLLMFALRCLHPPSCALALSVALNPSLSELGIDVVWPILLSTLVL IGCALLYNNLMRSPYPRPYQSPRANLHGTRDLAPSARTDFSARDLDQALQDFGEYVDI TRDDLERLIHHTERYALRRRMGELTAARIMSRDVQTASTETFIDDAWKQLQEHRLKAL PVLDEHRRLAGIVTQSDLLKHFRPDGSPFKRLRFLRGTKLKTIMTTPVVCVQADTHAV ELVSLLSDEGLHCLPVLNEAGYLVGIVSQTDLIAALYRNWLQHLGQADQIT" misc_feature complement(2014296..2014652) /locus_tag="PA1854" /note="HPP family; Region: HPP; pfam04982" /db_xref="CDD:461506" misc_feature complement(2013708..2014082) /locus_tag="PA1854" /note="Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the HPP motif domain; Region: CBS_pair_HPP_assoc; cd04600" /db_xref="CDD:341375" misc_feature complement(order(2013720..2013722,2013729..2013734, 2013738..2013740,2013744..2013746,2013783..2013785, 2013993..2014001,2014065..2014073,2014077..2014079)) /locus_tag="PA1854" /note="putative ligand binding site II [chemical binding]; other site" /db_xref="CDD:341375" misc_feature complement(2013864..2014079) /locus_tag="PA1854" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341375" misc_feature complement(order(2013732..2013734,2013777..2013785, 2013849..2013851,2013936..2013938,2013945..2013950, 2013960..2013962,2013999..2014001)) /locus_tag="PA1854" /note="putative ligand binding site I [chemical binding]; other site" /db_xref="CDD:341375" misc_feature complement(2013720..2013851) /locus_tag="PA1854" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341375" gene complement(2014915..2015136) /locus_tag="PA1855" /db_xref="GeneID:880682" CDS complement(2014915..2015136) /locus_tag="PA1855" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250546.1" /db_xref="GeneID:880682" /translation="MLLSLLCLSTLALGLALSLAGSTREEREQAALLPFADDPEAARR VARDTGKICRQVVRPLEESREAAGPPFLA" gene complement(2015139..2016581) /locus_tag="PA1856" /db_xref="GeneID:882109" CDS complement(2015139..2016581) /locus_tag="PA1856" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cbb3-type cytochrome C oxidase subunit I" /protein_id="NP_250547.1" /db_xref="GeneID:882109" /translation="MNDTDSRKDPDGYNYDVVRQFTLMTLVWGILGMGLGVFIAAQLV WPALNLDLPWTSFGRIRPIHTSLVIFAFGGSALFATSFYVVQRTSGVRLISDALARFV FWGWQAAIVGMIVSYPLGYTTSKEYAEMEWPLALWMAIVWVVYACLFFGTIARRKVKH IYVGNWFYGAFIIVTAMVHMVNHALLPVSLGKSYSAYSGATDAMIQWWYGHSVVGFIL SVGFLGMMYYFVPKQAGRPIYSYRLSIVHFWAIISIYIWAGPHHLHYTALPDWAQSLG MVMSLILLAPSWGGMINGMMTLSGAWHKLRDDPILRFLVVSLAFYGMSTFEGPMMAIK TVNSLSHYTDWTIGHVHAGALGWVAMISIGTLYHMIPKLWGRERMHSVGLINAHFWLA TIGTVLYIASMWVNGITQGLMWRAVNEDGTLTYSFVEALVASHPGYVVRLLGGATFAS GMLLMAYNTWRTLRSAQDQRQPVLAAGQGA" misc_feature complement(2015151..2016557) /locus_tag="PA1856" /note="cbb3-type cytochrome c oxidase subunit I; Provisional; Region: PRK14488" /db_xref="CDD:237726" misc_feature complement(order(2015253..2015255,2015337..2015342, 2015517..2015522,2015529..2015531,2015550..2015552, 2016342..2016344,2016495..2016497,2016507..2016512, 2016522..2016524,2016543..2016545)) /locus_tag="PA1856" /note="Low-spin heme binding site [chemical binding]; other site" /db_xref="CDD:238461" misc_feature complement(order(2016213..2016215,2016225..2016227, 2016243..2016248,2016423..2016425,2016432..2016434, 2016456..2016458,2016465..2016467)) /locus_tag="PA1856" /note="D-pathway [active]" /db_xref="CDD:238461" misc_feature complement(order(2015340..2015342,2015556..2015561, 2015571..2015573,2015970..2015975,2015988..2015990)) /locus_tag="PA1856" /note="Putative water exit pathway; other site" /db_xref="CDD:238461" misc_feature complement(order(2015535..2015537,2015796..2015801, 2015949..2015951)) /locus_tag="PA1856" /note="Binuclear center (active site) [active]" /db_xref="CDD:238461" misc_feature complement(order(2015712..2015714,2015721..2015723, 2015796..2015801,2015904..2015906,2015937..2015939, 2015949..2015951)) /locus_tag="PA1856" /note="K-pathway [active]" /db_xref="CDD:238461" misc_feature complement(order(2015337..2015342,2015556..2015561, 2015796..2015798)) /locus_tag="PA1856" /note="Putative proton exit pathway; other site" /db_xref="CDD:238461" gene complement(2016928..2017851) /locus_tag="PA1857" /db_xref="GeneID:879188" CDS complement(2016928..2017851) /locus_tag="PA1857" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250548.1" /db_xref="GeneID:879188" /translation="MAGASLLTLLDDIAAVLDDVSLMTKVAAKKTAGVLGDDLALNAQ QVTGVNADRELPVVWAVAKGSLRNKAILVPAALLISAFAPWAVIPLLMLGGAYLCFEG FEKIAHKYLPHDDEHADEAALAANVDVAALEKQKIGGAIRTDFILSAEIIAITLGTVA ESSFTTQVLVLVGIALVMTIGVYGLVAGIVKLDDAGLYLSRRDSGFAQGLGGAILRTA PYLMKGLSVVGMAAMFMVGGGILTHGIPVVHHAIEQAAQSVAGIATLGPLLAAITPTL LNFLFGIVAGAVVLAGVLLVKRLLPKKKKTG" misc_feature complement(2016937..2017848) /locus_tag="PA1857" /note="Membrane protein MutK/YedI, may be involved in DNA repair [Replication, recombination and repair]; Region: MutK; COG2354" /db_xref="CDD:441921" gene complement(2017967..2018794) /gene="str" /locus_tag="PA1858" /db_xref="GeneID:882015" CDS complement(2017967..2018794) /gene="str" /locus_tag="PA1858" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="streptomycin 3''-phosphotransferase" /protein_id="NP_250549.1" /db_xref="GeneID:882015" /translation="MSESLDFSPYLERWALQPDGEPFATHSSRLLPVRHRGAAAMLKI SSAEEERFGHVLLNWWDGQGAARVLAYDHQALLMERATGGRSLLEMVRRGDDDEATRI LCQAIERIHAPRPGPLPELTPLERWFDSLYAAERRYGGLYVDCANAARYLLETAREQR PLHGDIHHGNVLDFGERGWQVIDPKRLYGERGYDYANLFTNPDAKTAQAPGRFERQLE IVIAASGLQRRRLLQWILAWTGLSAAWFDEDGSREETEAELAIARLALANLARTPAQ" misc_feature complement(2018051..2018758) /gene="str" /locus_tag="PA1858" /note="Aminoglycoside/hydroxyurea antibiotic resistance kinase; Region: APH_6_hur; pfam04655" /db_xref="CDD:398368" gene complement(2018803..2019690) /locus_tag="PA1859" /db_xref="GeneID:882037" CDS complement(2018803..2019690) /locus_tag="PA1859" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250550.1" /db_xref="GeneID:882037" /translation="MKANSDELQSFVSVVDSGSISAAAEQMGLTASAVSRTLSRLEHK LGTTLLNRTTRRMELTEEGRYFLDQARQILQQMEALEERLALRRQSPAGRLRINAASP FMLHAVVPHIGEFRRLYPDIQLELNTNDLIIDLLEQRTDVAIRIGALSDSTLHARPLG ASRLHILASPEYLARHGTPASIEGLRGHTLLGFTQPEHLNRWPVVHADGDRLEIQPDI SASSGETLRQLALSHQGIACLASFMTDRDIQDGRLVPLFAEQMSEYRQPIHAVYYRNS QLALRIQCFLDFIQQRLGA" misc_feature complement(2018812..2019690) /locus_tag="PA1859" /note="DNA-binding transcriptional regulator YafC; Region: trans_reg_YafC; NF040888" /db_xref="CDD:468824" gene 2019776..2020603 /locus_tag="PA1860" /db_xref="GeneID:882068" CDS 2019776..2020603 /locus_tag="PA1860" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250551.1" /db_xref="GeneID:882068" /translation="MPGHRITLTGEKQTLLITLYAKALDSRLDDSILHDRFAEEAVRQ IDFDFSRVALGKGNERALAMRSHYFDQACREFLGRHPEGQVLNLGCGLDSRIYRVDPP AELPWFDLDYPEVMDLRERLYPPRAGAYRALRHSVDDDGWLQGVPRERPALVLAEGLM PYLRESQVRRLVERLVDHLGSGELLFDGYGRLGIMLLRLYPPLRETGAQVHWSIDDPR ELERWHPALRFIEEVTDYDPQDVAKLPQSSRLMLPIYNGFAFLRRMGRLIRYRWPRV" misc_feature 2019848..2020486 /locus_tag="PA1860" /note="O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport and catabolism]; Region: YktD; COG3315" /db_xref="CDD:442544" gene complement(2020625..2021710) /gene="modC" /locus_tag="PA1861" /db_xref="GeneID:882019" CDS complement(2020625..2021710) /gene="modC" /locus_tag="PA1861" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="molybdenum ABC transporter ATP-binding protein ModC" /protein_id="NP_250552.1" /db_xref="GeneID:882019" /translation="MDGLRLRFRRAYPGFELDIDLALPGRGVTALFGHSGSGKSTCLR CIAGLEKAAEGEVTINGETWQDSRRNLFVAPHRRALGYVFQDANLFRHLTVRRNLAFG LKRIAAAERRVELEQACALLGIEHLLERMPERLSGGEQQRVGIARALLTSPRLLLMDE PLASLDLKRKGEILPYLERLHEELDIPVLYVSHSPDEVARLADHLVLLENGKVRASGP IGETLARVDLPLALDDDAGVVIEGTVSDHDPAYGLLTLVLPGSALQMRVAHAPLAPGK RLRFKVQARDVSLNLRDDAQSSILNRLPVRVLELVDTDTAAHVLVRLDAGGNPLLARI TRYSRDQLQLRPGQLLWAQIKSVAVLA" misc_feature complement(2020628..2021704) /gene="modC" /locus_tag="PA1861" /note="ABC-type molybdate transport system, ATPase component ModC [Inorganic ion transport and metabolism]; Region: ModC; COG4148" /db_xref="CDD:443319" gene complement(2021712..2022398) /gene="modB" /locus_tag="PA1862" /db_xref="GeneID:882065" CDS complement(2021712..2022398) /gene="modB" /locus_tag="PA1862" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="molybdenum ABC transporter permease ModB" /protein_id="NP_250553.1" /db_xref="GeneID:882065" /translation="MALPLDSTDLAAIWLTIELASLTTLLLLLIGTPIAWWLARTRSW LKGPIGAVVALPLVLPPTVIGFYLLVSMGPNGFIGQLTQSLGLGTLPFTFAGLVVGSV FYSLPFVVQPLQNAFEAIGEKPLEAAATLRASPVDRFFSVVLPLARPGFVTAAILGFA HTVGEFGVVLMIGGNIPEKTRVVSVQIFDHVEAMEYAQAHWLAGGMVAFSFVVLLALY SGRRRRPGWA" misc_feature complement(2021727..2022386) /gene="modB" /locus_tag="PA1862" /note="ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; Region: ModB; COG4149" /db_xref="CDD:443320" gene complement(2022411..2023166) /gene="modA" /locus_tag="PA1863" /db_xref="GeneID:877661" CDS complement(2022411..2023166) /gene="modA" /locus_tag="PA1863" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="molybdenum ABC transporter substrate-binding protein ModA" /protein_id="NP_250554.1" /db_xref="GeneID:877661" /translation="MTTRLPQLLLALLASAVSLAASADEVQVAVAANFTAPIQAIAKE FEKDTGHRLVAAYGATGQFYTQIKNGAPFQVFLSADDSTPAKLEQEGEVVPGSRFTYA IGTLALWSPKAGYVDAEGEVLKSGSFRHLSIANPKTAPYGLAATQAMDKLGLAATLGP KLVEGQNISQAYQFVSSGNAELGFVALSQIYKDGKVATGSAWIVPTELHDPIRQDAVI LNKGKDNAAAKALVDYLKGAKAAALIKSYGYEL" misc_feature complement(2022417..2023094) /gene="modA" /locus_tag="PA1863" /note="Substrate binding domain of ModA/WtpA from Azotobacter vinelandii and its closest homologs;the type 2 periplasmic binding protein fold; Region: PBP2_AvModA; cd13539" /db_xref="CDD:270257" misc_feature complement(order(2022609..2022611,2022663..2022668, 2022744..2022749,2022930..2022932,2022987..2022989, 2023071..2023076)) /gene="modA" /locus_tag="PA1863" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270257" protein_bind 2022841..2022853 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(2023281..2023931) /locus_tag="PA1864" /db_xref="GeneID:882107" CDS complement(2023281..2023931) /locus_tag="PA1864" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250555.1" /db_xref="GeneID:882107" /translation="MKKIRQRNLQLILDAACEVFADCGFSAARLSDVAERAGVAKANV LYYYRSKAQLYEAVLDSIVEPLLEASRPFAGDQPPAEALRAYVDNKMRIGAERPYAAR VFSCEIMRGAPRMPAPLLERLDAQAERNAERIRQWIDEGLLAPLDPYHLLLNLWAMTE SYALGGWQLARLTGQAGLDASDYRQAAENIVRLVCAGCLALPGEAAPRRRFRALAG" misc_feature complement(<2023668..2023913) /locus_tag="PA1864" /note="ScbR family autoregulator-binding transcription factor; Region: ScbR_bind_reg; NF041196" /db_xref="CDD:469100" misc_feature complement(2023332..2023757) /locus_tag="PA1864" /note="YcdC-like protein, C-terminal region; Region: TetR_C_3; pfam08362" /db_xref="CDD:429946" gene 2024065..2025744 /locus_tag="PA1865" /db_xref="GeneID:877940" CDS 2024065..2025744 /locus_tag="PA1865" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="Fanconi-associated nuclease" /protein_id="NP_250556.1" /db_xref="GeneID:877940" /translation="MHEQYQAPLPVNSPALPEPFYYLHNFRAVLAWIGERYADLLDDQ ERAFIAAFAELPEASQALLVRMVMRKGTLFREGKLAYAEIGDTRAAVQPLLALGWVDA QPTLELAQLFGLLKKDELSQLFRDHLGRANLRKDALLERLQPLFPEARRLAEWQADFA EPVYELRCMALCDRLRLMYFGNLWQDWSEFVLADLGIYRYESVEFSADSRGFRLRADV DAYLHLFDCRQRFDLGEPLEELLAGLPGEPYANPWLEGRRVKLLFQFAQHCEKQRDFD LAQRLYRQSSHPGARLRAIRSLERGERFAEAHALAREASCAPESDAERQGLARLLPRL QGKLGLPRQARAAAPEIDRLDLCLAFPSEPCSVEWAVREHLEEPGCAVHYVENGLINS LFGLLCWEAIFAAIPGAFFHPFHSAPADLHSADFRQRRAALFEACLGRLEDGSYRDAI RCRYRDKFGLQSPFVYWELLGEELLEQALDCLPAAHLRAWFERLLEDIPGNRAGLPDL IQFWPAQRRYRMVEVKGPGDRLQDNQLRWLQFCREREMPVAVCYVRWHVDD" misc_feature 2024125..2025726 /locus_tag="PA1865" /note="PDDEXK family nucleases; Region: PDDEXK_nuclease-like; cl40440" /db_xref="CDD:477358" gene 2025737..2028013 /locus_tag="PA1866" /db_xref="GeneID:882110" CDS 2025737..2028013 /locus_tag="PA1866" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250557.1" /db_xref="GeneID:882110" /translation="MTEQGGEALYQVAVRALCEFSAKRGDLDLRFTPSPSALEGIAGH TLVTSRRPAHYQREVALDGRYRHLQVRGRADGYDPQANCLEEIKTHRGDLALQPANHR HLHWAQARVYGWLLCAERKLEEVELALVYLEVGSQKETRFVERVRADELRLFFESQCQ AFLAWAEQELAHRQRRDRELAALRFPHAEFRHGQRQLAEAVYKAASAGCCLMAQAPTG IGKTIGTLFPQLKAMPGQRLDRLFFLAAKTPGRALALHALRSLEGETGGLPVRVLELV ARDKACEHPDKACHGESCPLAQGFYERLPAARAAAVEARWLDQARLREVALAHRVCPY YLGQELARWCDLAVGDYNYYFDLGAMLHGLAQVNQWRVAVLVDEAHNLVERGRRMYSA ELDQGDFLGVRKTAPEALRKPLERIQRAWNELGKTQADDYQAYDEPPQKLLLALQNAV AAINDLLAEQPQALEPALQEFYFAILQFGRLAELFGEHSLFDIEKRPGRNGRSLARLC LRNVVPAAFLAERFAASRSTVLFSATLGPRDYYADLLGLPAGTPWLEVDSPFSAEQLE VHIQRRVSTRYAQRQASLAPIAAILGEQFRQRPGNYLAFFSSFDYLQQALDVFRQAYP WVPCWSQTPRMDEAERRVFLERFVAGGEGIGFAVLGGAFGEGIDLPGERLIGAFIATL GLPQVNPVNEQIRLRMQRLFGDGYDYTYLYPGLQKVVQAAGRVIRSRSDRGVVHLIDD RFAQAKVRRLLPGWWQLR" misc_feature 2026265..2028010 /locus_tag="PA1866" /note="Rad3-related DNA helicase DinG [Replication, recombination and repair]; Region: DinG; COG1199" /db_xref="CDD:440812" protein_bind 2026248..2026260 /locus_tag="PA1866" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 2028103..2028312 /locus_tag="PA1866a" /db_xref="GeneID:17373358" CDS 2028103..2028312 /locus_tag="PA1866a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719750.1" /db_xref="GeneID:17373358" /translation="MASAPDALPQALSSDDAPAQAAPSDASALLKAALAKKNQAQLYP QRKIHDKGQRPGMAPRGTRRSMGKR" gene 2028454..2028981 /gene="xphA" /locus_tag="PA1867" /db_xref="GeneID:878024" CDS 2028454..2028981 /gene="xphA" /locus_tag="PA1867" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="type VI pilus biosynthesis protein" /protein_id="NP_250558.1" /db_xref="GeneID:878024" /translation="MQRARLPESACCMSRHLPSSFVSLRSLAGHAPAVLCVLLLALLS ASLASQTRSLRRELAELPAAAAPAPPANPSAAPRAALAGLFGGAPSPRGATAGERLQL RLLACFLARREDRSAALIAVAGRSQRFLPGAEVRPGTVLLAVHRDHVVLRDQGYEERL YFPKAEGAETTHATL" misc_feature 2028748..>2028957 /gene="xphA" /locus_tag="PA1867" /note="Type II secretory pathway, component PulC [Intracellular trafficking, secretion, and vesicular transport]; Region: PulC; COG3031" /db_xref="CDD:442267" gene 2028968..2031298 /gene="xqhA" /locus_tag="PA1868" /db_xref="GeneID:878598" CDS 2028968..2031298 /gene="xqhA" /locus_tag="PA1868" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="secretion protein XqhA" /protein_id="NP_250559.1" /db_xref="GeneID:878598" /translation="MPRCSTRSAQRLSPLFLVLSLAVLGLAPPVHPAPAETAAAQEEE QWTINMKDAEIGDFIEQVSSISGQTFVVDPRVKGRVTVVSQARLSLAEVYQLFLSVLA THGYAVLPQGDQARIVPNMEARQDAAQKTVRDGPGSLETRVVQAQQTSVAELIPMIRP LVPAHGHLAAVPSANALIVSDRRSNIERIEAIVRSLDRAGEHDYSIYDMRHAWVAEIA EVLDRSVTPAAGKSAATVQVLADSRSNRLVLLGPPQARARLLRLAQSLDVPSSRSANS RVIRLRHGDAKTLAATLGEIGESLHGERGQDGRGSGKRGLLVRADESLNALVILADPE DVGLLEDIVRQLDVPRAQLLVEAAIVELSGEIGDALGVQWALRSGHVAGGAGFADSGL SIGTLLGALQAGKPPAELPDGAIVGLGSRDFGALVTALSRNSRSNLLSTPSLLTLDNQ KAEILVGQNVPFQTGSYTTSASGSSNPFTTVERKDIGVTLKVTPHIGEDRMLRLEIEQ EISSIAPTATLAAKAVDLVTNKRSIKSTVLADDGQVIVLGGLIQDDLQRSDSRVPLLG DIPGVGRLFRSSRETRVKRNLMVFLRPSIVRDAAGLERISHGRYRSIQLLRGAAGEPA RPLFEDAGAIDLRPAAQVAPAPIGSPRSYPAPAPVLMEKPRLADPASLGDGRGGEVLE VRQGTHAPQPPSPQRYAVRLVEGSSEAFMRALIERHPGLSLRLRRELRDGQELFAVER GDYLDPEQARRALAELPESLPRGKARVIAHTPGSAL" misc_feature 2029109..2030785 /gene="xqhA" /locus_tag="PA1868" /note="type II secretion system protein D; Region: type_II_gspD; TIGR02517" /db_xref="CDD:274175" protein_bind 2031377..2031396 /experiment="Beta-gal reporter assay [PMID: 11544214]" /experiment="Site directed mutagenesis [PMID: 11544214]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA1869" /bound_moiety="LasR" gene 2031466..2031705 /locus_tag="PA1869" /db_xref="GeneID:881955" CDS 2031466..2031705 /locus_tag="PA1869" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl carrier protein" /protein_id="NP_250560.1" /db_xref="GeneID:881955" /translation="MDDIETRVRKLVAARFGVEECDIRLDSDFRNDFGAESLEVVELV MALEAEFGVEIADDDAERIETVRQAIDYLEEAVPT" misc_feature 2031466..2031696 /locus_tag="PA1869" /note="acyl carrier protein; Provisional; Region: acpP; PRK00982" /db_xref="CDD:179197" gene 2031988..2032413 /locus_tag="PA1870" /db_xref="GeneID:877596" CDS 2031988..2032413 /locus_tag="PA1870" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250561.1" /db_xref="GeneID:877596" /translation="MATRRKTTPQEIDDIQDRMGSMRELDFDERRQARKARIGDERPE AEVEAEFSSRRVREAGHAGGQPDEDDGYQDNVGMDDLAPETLIDESGARSPAERGGES PADKRLRVVHGNEIGAGHGLDEAELARRDPLDGSSDEER" gene 2032695..2033951 /gene="lasA" /locus_tag="PA1871" /db_xref="GeneID:878260" CDS 2032695..2033951 /gene="lasA" /locus_tag="PA1871" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="protease LasA" /protein_id="NP_250562.1" /db_xref="GeneID:878260" /translation="MQHKRSRAMASPRSPFLFVLLALAVGGTANAHDDGLPAFRYSAE LLGQLQLPSVALPLNDDLFLYGRDAEAFDLEAYLALNAPALRDKSEYLEHWSGYYSIN PKVLLTLMVMQSGPLGAPDERALAAPLGRLSAKRGFDAQVRDVLQQLSRRYYGFEEYQ LRQAAARKAVGEDGLNAASAALLGLLREGAKVSAVQGGNPLGAYAQTFQRLFGTPAAE LLQPSNRVARQLQAKAALAPPSNLMQLPWRQGYSWQPNGAHSNTGSGYPYSSFDASYD WPRWGSATYSVVAAHAGTVRVLSRCQVRVTHPSGWATNYYHMDQIQVSNGQQVSADTK LGVYAGNINTALCEGGSSTGPHLHFSLLYNGAFVSLQGASFGPYRINVGTSNYDNDCR RYYFYNQSAGTTHCAFRPLYNPGLAL" misc_feature 2033262..2033798 /gene="lasA" /locus_tag="PA1871" /note="Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain [Cell wall/membrane/envelope biogenesis]; Region: NlpD; COG0739" /db_xref="CDD:440502" gene complement(2034066..2034857) /locus_tag="PA1872" /db_xref="GeneID:881968" CDS complement(2034066..2034857) /locus_tag="PA1872" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250563.1" /db_xref="GeneID:881968" /translation="MSLSPADLKQLQAAKNLLENPGLTAQLTSLLGTPIEYGLKKLPR KVNEKLGSVIEGALLKVARSATATLQENASGQPANRLHTLGAAVSGGVGGFFGPLAML VEVPVTTGIIFRSIADIARSEGESIRDMDTLMACIEVFALGGKSASDDASESGYYAVR TALAQQVKAAADFLGKDAGSKKAAPMLLALVRKVAERLGVQYSEKLAAQIVPIVGALG GAAINTVFMNHFQAMARGHFVVRRLERHYGKDVVRDAYALLPRRG" misc_feature complement(2034129..2034836) /locus_tag="PA1872" /note="EcsC protein family; Region: EcsC; pfam12787" /db_xref="CDD:463705" gene complement(2034918..2035940) /locus_tag="PA1873" /db_xref="GeneID:878412" CDS complement(2034918..2035940) /locus_tag="PA1873" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250564.1" /db_xref="GeneID:878412" /translation="MHHGISPPQDADLFGLIYGFRFRPGEAGREIDSVTALACLRQAR EEAPDEFLWLHLNLAHAACERWMKKHLELPDYFFESLREGSRSTRIEHVDSALLAVVN DVVFNFGLVSSDVATLWVCARGRLLVSARAQPLRSVDKLRSSVKHGEPFRSPLQLLIH LLRDQGDVLTQIVRETSVAVDRIEDQLLALRLSANRADLGAMRRVLVRLQRLLALEPG SLLRLLNRPPEWLQDADLRELREATEEFSLVISDLTALGERIKLLQEEIAAKLNEQNN RILFTLTMVTVLALPINIVAGFFGMNVGGIPFADDPEGFWIMLVLVASFTFLAGRWAF RKRGDY" misc_feature complement(2034924..2035790) /locus_tag="PA1873" /note="Uncharacterized bacterial subgroup of the Salmonella typhimurium Zn2+ transporter ZntB-like subfamily; Region: ZntB_u1; cd12834" /db_xref="CDD:213368" misc_feature complement(order(2035212..2035214,2035278..2035280, 2035287..2035292,2035437..2035439,2035446..2035448, 2035530..2035535,2035539..2035550,2035590..2035595, 2035635..2035637,2035641..2035643,2035677..2035685, 2035767..2035769,2035776..2035778)) /locus_tag="PA1873" /note="Cl binding site [ion binding]; other site" /db_xref="CDD:213368" misc_feature complement(order(2034936..2034938,2034945..2034947, 2034981..2034986,2034993..2034998,2035032..2035055, 2035059..2035076,2035080..2035088,2035092..2035130, 2035134..2035157,2035164..2035172,2035176..2035181, 2035185..2035190,2035197..2035202,2035206..2035211, 2035218..2035223,2035227..2035232,2035263..2035268, 2035275..2035280,2035287..2035292,2035296..2035298, 2035308..2035313,2035317..2035322,2035329..2035334, 2035341..2035346,2035350..2035355,2035389..2035391, 2035398..2035403,2035407..2035412,2035419..2035421, 2035428..2035433,2035440..2035442,2035452..2035454, 2035464..2035466,2035473..2035475,2035509..2035511, 2035521..2035523,2035668..2035670,2035674..2035676, 2035704..2035709,2035716..2035718)) /locus_tag="PA1873" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:213368" protein_bind complement(2035985..2035997) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1873" /bound_moiety="AmrZ" gene 2036441..2043847 /locus_tag="PA1874" /db_xref="GeneID:882263" CDS 2036441..2043847 /locus_tag="PA1874" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250565.1" /db_xref="GeneID:882263" /translation="MSIQAKVTPIDQSISSAAAVEVPENGILKLSQSSNVALDVAPES VAGYSKSGSDLIVQLKTGESVRIANFYAEGQPSSQLFLADKDKLVAVDLPPVAADGPL MAGYIPQESLAGFESLTGAGVLGGMSAGTALLVGAAAIGAGVAISNSSGGGGGGGSSV PPDTTPPKAASGLKIAPDGSSISGQAEAGASVGIDTNGDGKPDLTVIADANGNFTAPL NPPLTNGQTVTVVVTDPAGNASPPAQVTAPDTTAPAPATDVQVAPDGSSVTGKAEPGS TVGVDTDGDGQPDTTVVVGPGGSFEVPLNPPLTNGETVTVIVTDPAGNNSTPVTVEAP DTTAPAPATDVQVAPDGSSVTGNAEPGATVGVDTDGDGQPDTTVVVGPGGSFEVPLNP PLTNGETVTVIVTDPAGNSSTPVTAEAPDFPDAPQVNASNGSVLSGTAEAGVTIVITD GNGNPIGQTSADANGNWSFTPGSQLPDGTVVNVVARDAAGNSSPATSITVDGVAPNAP VVEPSNGSELSGTAEPGSSVTLTDGNGNPIGQTTADANGNWSFTPSTPLPDGTVVNVV ARDAAGNSSPPASVTVDAVAPATPTVDPSNGTTLSGTAEPGSSVTLTDGNGNPIGQVT ADGSGNWTFTPSTPLPNGTVVNATATDPSGNASSPASVTVDAVAPATPVVNPSNGTTL SGTAEPGATVTLTDGNGNPIGQVTADGSGNWSFTPTTPLPNGTVVNATATDASGNTSA GSSVTVDSVAPATPVINPSNGTTLSGTAEPGSSVTLTDGNGNPIGQVTADGSGNWSFT PSTPLADGTVVNATATDPAGNTSGQGSTTVDGVAPTTPTVNLSNGSSLSGTAEPGSTV ILTDGNGNPIAEVTADGSGNWTYTPSTPIANGTVVNVVAQDAAGNSSPGASVTVDSQA PAAPVVNPSNGTTLSGTAEPGATVTLTDGNGNPIGQVTADGSGNWSFTPGTPLANGTV VNATASDPTGNTSAPASTTVDSVAPAAPVVNPSNGAEISGTAEPGATVTLTDGSGNPI GQVTADGSGNWSFTPSTPLADGTVVNATATDPAGNTGGQGSTTVDAIAPATPTVNLSN GSSLSGTAEPGSTVILTDGNGNPIAEVTADGSGNWTYTPSTPIANGTVVNVVAQDASG NSSPPATVTVDSSAPPAPVINPSNGVVISGTAEAGATVTLTDAGGNPIGQVTADGSGN WSFTPGTPLANGTVIVATATDPTGNTGPQAATTVDAVAPPAPVIDPSNGTTISGTAEA GAKVILTDGNGNPIGETTADGSGNWSFTPGTPLANGTVVNAVAQDPAGNTGPQGSTTV DAVAPNTPVVNPSNGNLLNGTAEPGSTVTLTDGNGNPIGQTTADGSGNWSFTPGSQLP NGTVVNVTASDAAGNTSLPATTTVDSSLPSIPQVDPSNGSVISGTADAGNTIIITDGN GNPIGQVTADGSGNWSFTPGIPLPDGTVVNVVARSPSNVDSAPAVITVDGVAPAAPVI DPSNGTEISGTAEAGATVILTDGGGNPIGQATADGSGNWTFTPSTPLANGTVINAVAQ DPAGNTSGPASVTVDAIAPPAPVINPSNGVVISGTAEAGATVILTDGNGNPIGQVTAD GSGNWSFTPGTPLANGSVINALAQDAAGNNSSPTSATVDSLAPAAPVIDPSNGSVIAG TAEAGATVILTDGNGNPIGQVTADGSGNWSFTPGTPLSNGTVVNAVAQDAAGNTSGPV STTVDAVAPATPVIDPSNGVELSGTAEPGVRVILTDGNGNPIGQTLADGSGNWSFTPG TPLANGTVVNAVAQDPAGNTSGPASTTVDTVAPATPVINPSNGSVITGTAEVGAKVIL TDGNGNPIGETTADGSGNWTFTPGTPLANGTVINAVAEDAAGNASGPASTTVDSVAPS APLLSISADGALLTGTAEPNSQVRIVVNGDTANPITVTVDGAGNFSLPFAPPLITGEL IAGVAVDAAGNVSGPATINAPDLAPPTISVPEAADTWINAAEIGDGIQVDVTVRPTMQ VGQVVTVKFAGQNGYEAEVSHTLTAGDIAAGNLTLTLTPPGGMGPFPEGASTVTADIN GGTASTPVPFTIDTIPPATPVLSLVGNILTISAEPGTELTVTVDVGGVTATATVTADN SGLASLNLLTDLDIDFSWDQLLNAQVSVVGRDPAGNPSNTASIGVGTSIEQPVTIGNF GLDVSLNPLNPRFGFSGTTEPDSSVVIRVITPALNVELLPIQADSSGNFSLNLLSPTI LTQLGLNITDILNLGSQISFNLVSTDSNGNDSAAYGITLTPNGLSLNIGQIDVNGTSG DDVLSGANGSSEHINGGDGSDLIFNVGTGDHVVAGNGNDTIQITATDFVSIDGGAGFD TLVLANGIDLDYNAVGVGTLSNLERIDLGKGDSGSVLTLTAAEVDAITDANNTLQITG ENNDTLNVVGAVNTGTTQLINGITYDVYTFGSTTLLIEDNTVQVVV" misc_feature 2036498..2036656 /locus_tag="PA1874" /note="BapA prefix-like domain; Region: biofilm_BapA_N; NF033677" /db_xref="CDD:411274" misc_feature <2036921..2038258 /locus_tag="PA1874" /note="Ig-like repeat protein Blp2; Region: Ig_like_BLP2; NF040520" /db_xref="CDD:468522" misc_feature <2038136..2039488 /locus_tag="PA1874" /note="Ig-like repeat protein Blp2; Region: Ig_like_BLP2; NF040520" /db_xref="CDD:468522" misc_feature <2038913..2040226 /locus_tag="PA1874" /note="Ig-like repeat protein Blp2; Region: Ig_like_BLP2; NF040520" /db_xref="CDD:468522" misc_feature <2040152..2041456 /locus_tag="PA1874" /note="Ig-like repeat protein Blp2; Region: Ig_like_BLP2; NF040520" /db_xref="CDD:468522" misc_feature <2040890..2042167 /locus_tag="PA1874" /note="Ig-like repeat protein Blp2; Region: Ig_like_BLP2; NF040520" /db_xref="CDD:468522" misc_feature 2042132..2042380 /locus_tag="PA1874" /note="Bacterial Ig domain; Region: Big_6; pfam17936" /db_xref="CDD:465576" misc_feature 2043002..2043757 /locus_tag="PA1874" /note="Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism]; Region: COG2931" /db_xref="CDD:442175" gene 2043847..2045124 /locus_tag="PA1875" /db_xref="GeneID:882209" CDS 2043847..2045124 /locus_tag="PA1875" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250566.1" /db_xref="GeneID:882209" /translation="MRGRRQYARKGRRHGKGAIWLLSLGLPMFASAMPLDQAVRAGLA IHPEVRSAMAEADRAGTEVEMAKGGYYPSVTMSGGPQEFDFGEIVYDLTASQMLYDWG RVTSKVDSASATQRKLSEAVLVARDDAALDIVETYLDVLASERRVEAVREHIQRLDGI REMTQARGGDGYADRSELDRANLELSRAQEQLSLEKGNLQDARNQYAILVGQEPADLV EPEPMSLQRYLAASDMARVIRESPLQRKALEDANVAEAEVREAKASLLPQLNLEASAL RREIGGHPESDSVVSLRFRMDTFQGLSNFRRPTAAQQRLESAKWSADAMQRDIRRQLQ NLFDNGDTLRWREQSLTQQVTESEQVGELYREQFEVGRRDVIDLLNVQRERFEAERQL INLRIERKRIEYRAAAQVGLLGPLLENRLNHGS" misc_feature 2043949..2045085 /locus_tag="PA1875" /note="Outer membrane protein TolC [Cell wall/membrane/envelope biogenesis]; Region: TolC; COG1538" /db_xref="CDD:441147" gene 2045114..2047285 /locus_tag="PA1876" /db_xref="GeneID:882231" CDS 2045114..2047285 /locus_tag="PA1876" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein/permease" /protein_id="NP_250567.1" /db_xref="GeneID:882231" /translation="MEAEKTPDNVVILNHDPIVDPLRQGLLLLCRQLGRPLGDAELVD GMPLEHGRLPLHLVARALRRADITAQVTRQPLRRIDRYLLPALLLLDDGRALVLVGND GEHAEVLVPQSDGGSQRMPLAELEALYSGTAVFAKCRYRPDGRVGDYASALPEHWFFG PLKRLWRSYAEVTAAALVANVLAVASALFAMQVYDRVVPNAAFDTLWILASGVALAIV LDGVLRIMRGHLLNVLGKRLDLQLSTLLFSRVLSTRVAAKPASMGAFSTQVREFESVR EFFTSSSAALISDLPFVAIFLLIIAVIGGHVVWVPLVACVLMILPGLLTQRLLGHLSR QNLREGAMKNGVLLEAFEHLETVKATRAEGRCLHQWETLTGELAGTAMKTHTLASTLS YSASIVQQLCYVGVVVFGVYRISEGAMTVGGLVACSILASRAIAPLSQAAGILGRWQH TKVAMEGLDQLMSAEQERPQGKRFVHKERLQGHYRLEGVRLAHGDSPPVVDVQALNIR AGERVALLGGNGAGKSTLLRLLSGLLDAQAGRLLLDDVSLTQIDPADRQRGIGYLPQD VALFHGSLRDNLNLENAALGDEELLETLDGVGLGAFVRGHPLGLDMPIQGNASLSGGQ RQAVGLARVLLQDPPILLLDEPTAAFDQGSEKQVIDYLQQWLGKRTLVITTHKKSMLA LVERAVVLRQGRVIMDGPLEQVVQGNQVQAPQAAEGGNHGL" misc_feature 2045177..2047240 /locus_tag="PA1876" /note="type I secretion system ATPase, LssB family; Region: type_I_sec_LssB; TIGR03375" /db_xref="CDD:274550" gene 2047275..2048462 /locus_tag="PA1877" /db_xref="GeneID:883045" CDS 2047275..2048462 /locus_tag="PA1877" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="secretion protein" /protein_id="NP_250568.1" /db_xref="GeneID:883045" /translation="MDSDRDAAALRRQLADPLLAATHPVYRPLLWTLLGCVLLFIGWA AWAQLDEVTRGDGRVVPFSRIQKIQSLEGGILDRLLVKEGDLVEVGQPLVRLDETRFL TNFQESANQASVLRAAIARLDAEVLGKKSIEFPPDVDPEGPLARSERELFKSRRDKLV EGTQAIQRQIHLAQSQLDLVRPLVAKRAVSQMEALKLSQDIATLSGKLTELKSTYFQD AYTERAQRKADLSALEPIVQQRQDQLRRTEILSPVRGRVNTVLINTRGGVIQPGEPIM EVIPVEERLLVEAKIKPRDVAFLVPGMPAKVKITAYDYTIYGDLKGTLEQISADTIEE DTPHGKESYYQVLIKTDGSQLKRGEEVLPIIPGMVAEVDILSGKRSVLNYLLRPLIKA RLY" misc_feature 2047365..2048450 /locus_tag="PA1877" /note="Cation efflux system protein CusB domain 1; Region: CusB_dom_1; cl46872" /db_xref="CDD:481212" gene complement(2048570..2049148) /locus_tag="PA1878" /db_xref="GeneID:877972" CDS complement(2048570..2049148) /locus_tag="PA1878" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250569.1" /db_xref="GeneID:877972" /translation="MSLELLSNRLEFLREAERLKDVLRSAHTSSGRPESTAEHSWRLC LMALAFEDQLAGLDLGKVLRMCVVHDLGEAIHGDIPAVEQAAHPDKGEQERADLLQLT RHLDAPLRDRLLALWDEYERGESAEALAVKALDKLETLLQHTQGDNPADFDYAFNLDY GRRYTDRAPLFKTLRELLDARTRQRLAVRRDA" misc_feature complement(2048627..2049103) /locus_tag="PA1878" /note="HD domain; Region: HD_3; pfam13023" /db_xref="CDD:432939" gene complement(2049237..2049791) /locus_tag="PA1879" /db_xref="GeneID:879624" CDS complement(2049237..2049791) /locus_tag="PA1879" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250570.1" /db_xref="GeneID:879624" /translation="MTEPLPSSSLGPALRRWRLLHRVKQTHAAELLGVAQSTISRWES GTQALLVEERARLERLLGARLEAAADQALARLVEANPQPVHLICDLTHRLLACSPARA AQFGVPLGELLDRSLWPYCSEEILRQEATLEELGWRELLAPPALEFASGANASAIVPI RRSRCRWTRMTLSDGRAVRLVETL" misc_feature complement(2049594..2049761) /locus_tag="PA1879" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cd00093" /db_xref="CDD:238045" misc_feature complement(order(2049660..2049662,2049735..2049737, 2049747..2049749)) /locus_tag="PA1879" /note="non-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" misc_feature complement(order(2049663..2049665,2049738..2049740)) /locus_tag="PA1879" /note="salt bridge [active]" /db_xref="CDD:238045" misc_feature complement(order(2049657..2049662,2049672..2049674, 2049681..2049683,2049714..2049719)) /locus_tag="PA1879" /note="sequence-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" gene complement(2049949..2052144) /locus_tag="PA1880" /db_xref="GeneID:877679" CDS complement(2049949..2052144) /locus_tag="PA1880" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_250571.1" /db_xref="GeneID:877679" /translation="MNSKIDLSNALPGSRRGFLKGAAVVGLTIGFQWSGARRALAAAL PDAGFAPNAFLRIAPDDSVTVIAKHVEMGQGAYTGIATIVAEELDADWSKVRVESAPA DAKRYANLAFGTMQGTGGSSAMANSWMQLREAGAKARAMLVEAAARQWQVPAAELRTR DGFVEHPTSQRKASYGSLAAAAAELPVPEKVQLKDPKDFRLIGHQAPRVDVPGKTDGS AQFTLDVSLPGMLVALLQRPPLFGATVKSFDATATRAIPGVVEVVQVPHGVAVVAKGF WAAKQGRDALKVEWDESKAEKRGSEALMAEYRKLAEQPGKPARRDGDAAKAVAGATRR IAASYEFPFLAHAPMEPLDAVVRLTADSCEIWAGDQFQTVDQGNAARTAGLKPEQVKI NTLYAGGSFGRRANAWSDYIVEAVSIAKALGANGVPVKLQWTREDDIHGGFYRPMYYH RLEAGLDADGKLVGWQHRIVGQSILEGTPFAAVMVKDGIDATSVEGAANLPYAVPNVS VELSTTQVGVPVLWWRVVGSSHTVYAVEAFIDEAAQAAGKDPYLFRRDLLAEQPRLRG VLELAAEKAGWDPSRPLPAGRGRGIAVTEAFKTFVAQVVEVSVDKDGKLKVERVVCAV DCGIPINPDVIAAQMEGGIGFGLGAILHSAITLKDGKVEQNNFDGYQVLRIAEMPKVE VHIVPSGEAPTGVGEPGVAPIGPALANAIFAATGQRLYNLPFPTSFAKA" misc_feature complement(<2051581..2052072) /locus_tag="PA1880" /note="Molybdopterin cofactor-binding domain; Region: MoCoBD_2; pfam20256" /db_xref="CDD:466407" misc_feature complement(2049973..2051565) /locus_tag="PA1880" /note="Aldehyde, CO or xanthine dehydrogenase, Mo-binding subunit [Energy production and conversion]; Region: CoxL; COG1529" /db_xref="CDD:441138" gene complement(2052149..2052610) /locus_tag="PA1881" /db_xref="GeneID:880922" CDS complement(2052149..2052610) /locus_tag="PA1881" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_250572.1" /db_xref="GeneID:880922" /translation="MPTSLVLNGKNVTLDVDPNMPLLWAIRESAGLHGTKFGCGMAQC GACTVQLDGTAVRSCVLPVSAVAGKRVTTIEGIQSKPGKAVQDAWVKLQVPQCGYCQS GQIMSATALLEQNASPSDADIDAAMNGNICRCAAYVRIRAAIHEAADTLKA" misc_feature complement(2052152..2052610) /locus_tag="PA1881" /note="Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and conversion]; Region: CutS; COG2080" /db_xref="CDD:441683" gene 2052941..2053264 /locus_tag="PA1882" /db_xref="GeneID:880936" CDS 2052941..2053264 /locus_tag="PA1882" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_250573.1" /db_xref="GeneID:880936" /translation="MAWIYLLLAGVFEIVWATAMKESAGFTRLWPSLVTLLFMILSFG LLAVSMKTLPLGTAYTIWVGIGAVGAFALGILLFGESPSPLRLLAVGLIVAGIVILKL ATRQG" misc_feature 2052944..2053255 /locus_tag="PA1882" /note="Multidrug transporter EmrE and related cation transporters [Defense mechanisms]; Region: EmrE; COG2076" /db_xref="CDD:441679" gene 2053277..2053675 /locus_tag="PA1883" /db_xref="GeneID:881501" CDS 2053277..2053675 /locus_tag="PA1883" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit A" /protein_id="NP_250574.1" /db_xref="GeneID:881501" /translation="MYASFAPATWALLAYLFGALALCLLMLGLGRVLGGRSHGRAKNL PFESGVDSTGSSRLRFSVKYALVAMLFVIFGIEMPFLYLWAVSLRENGWAGFVEATLF VSLLLVGLFYLHRVGALDWSPERRRKKPHD" misc_feature 2053304..2053642 /locus_tag="PA1883" /note="NADH:ubiquinone oxidoreductase subunit A; Validated; Region: PRK06602; cl00535" /db_xref="CDD:469809" gene complement(2053672..2054223) /locus_tag="PA1884" /db_xref="GeneID:879933" CDS complement(2053672..2054223) /locus_tag="PA1884" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250575.1" /db_xref="GeneID:879933" /translation="MDIDELIARRLAALRKERELTLAQLAERCAVSKAMISRIERNQS SPTASVLGRLAGGLGVALSELLGDAQAPAEPLCRRAQQEVWEDPASGYRRRQVGARDP RSGCEMVEVEIPANARLDYPRWGGRPYRQRLWLVEGALRVDYGEQSFHLQRGDRLDFG VDRAVTFATAGQACRYLLVILHD" misc_feature complement(2053978..2054220) /locus_tag="PA1884" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" misc_feature complement(2053684..2053953) /locus_tag="PA1884" /note="XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain; Region: cupin_XRE_C; cd02209" /db_xref="CDD:380339" misc_feature complement(order(2053690..2053692,2053723..2053725, 2053729..2053731,2053831..2053833,2053855..2053857, 2053891..2053893,2053897..2053899,2053942..2053944)) /locus_tag="PA1884" /note="putative active site [active]" /db_xref="CDD:380339" gene 2054309..2054842 /locus_tag="PA1885" /db_xref="GeneID:878761" CDS 2054309..2054842 /locus_tag="PA1885" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250576.1" /db_xref="GeneID:878761" /translation="MTEPTIRRLAGEEILARLDELAEVLLDCVEGGASVSFMWPLPRE RALAFWRGVGESVAGDERLLLVAEAEGRIVGTVQLLLDQPPNQPHRADVAKMLVHRRA RRRGIGEALMGELDRLARACGKSLLVLDTVSGSAAERLYLKTGWTRVGEIPDYALMPD GTPCPTTYFYKRLAAAG" misc_feature 2054360..2054827 /locus_tag="PA1885" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" gene 2054911..2057274 /gene="polB" /locus_tag="PA1886" /db_xref="GeneID:878669" CDS 2054911..2057274 /gene="polB" /locus_tag="PA1886" /EC_number="2.7.7.7" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA polymerase II" /protein_id="NP_250577.1" /db_xref="GeneID:878669" /translation="MELLQGFVLTRHWRDTPAGTEVAFWLATEQGPRQVRLPPQPSVA FVLAEQRGRVESLLAGETGAELRPLALRDFQQRPVLGLYCQQHRQLMNLEKRLRQAGV EVFEADIRPPERYLMERFITAPVSLEASVEADGSLLARRLKPAPDYRPRLRLVSLDIE TNARGDLYSIALEGCDQRQVYMLGPANGDAAAVDFRLDYCDSRAGLLERLNQWLAEHD PDAIIGWNLVQFDLRVLHEHAQRLKVPLRLGRGGDEMGWREHGSRNNHFFAAAAGRLI IDGIEALRSATWSFPSFSLENVARTLLGEGKAIDNPYQRMDEIDRMFAEDKPALAHYN LKDCELVTRIFARTELLDFLLERATVTGLPADRSGGSVAAFTHLYMPLMHRAGFVAPN LGEKRPEASPGGFVMDSRPGLYESVLVLDYKSLYPSIIRTFLIDPVGLVEGLRQPDDE HSVEGFRGARFSRTRHCLPAIVARVWEGREAAKRERNQPLSQALKIIMNAFYGVLGSS GCRFFDPRLASSITLRGHRIMRRTRELIEAEGYTVIYGDTDSTFVWLGSPRAEEEAAA IGRALVARVNDWWREHLKEEFGLDSALELQFETHYRRFLMPTVRGAEEGSKKRYAGLV RRADGGEEMVFKGLETVRTDWSPLAQRFQQELYLRIFNRQPYQDYVRDYVRRTLAGEL DDLLVYRKRLRRRLDDYQRNVPPHVRAARIADDYNLERGRPRQYQSGGWISYVISVAG PEPLEARRSAIDYEHYVGKQLQPVADAILPFVGDDFATLVDRQMALF" misc_feature 2054911..2057271 /gene="polB" /locus_tag="PA1886" /note="DNA polymerase II; Reviewed; Region: PRK05762" /db_xref="CDD:235595" gene complement(2057278..2057946) /locus_tag="PA1887" /db_xref="GeneID:879131" CDS complement(2057278..2057946) /locus_tag="PA1887" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250578.1" /db_xref="GeneID:879131" /translation="MKTLSSLLLIGFAVVLLAPRMAPAASAAEDKATYCGSGFTQYLV PDDVAGCSLSEACRLHDICYGRCDKDGDLYGSAYCAQSEKSEARNMSKQQCDARLQAD IAAQNGNSRLCRAVGGVYRVFVKHLGQGPFNGREALDIYLKVMQSAPSAADADARLEA IHQLQKQGLTNTKEIRYDAERIVIPLNRPVESPLTNGSDTLVLPRNLDRERLRQLDQR LIRQ" gene complement(2057930..2059339) /locus_tag="PA1888" /db_xref="GeneID:880436" CDS complement(2057930..2059339) /locus_tag="PA1888" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250579.1" /db_xref="GeneID:880436" /translation="MKILALLAACLLAGCAANAPLRDDSESTCADMRPCSDSYYERHP NYEIGFVEYSERGNDFAPARTQRLIDQLKRYSAGGDIAMVVFIHGWKHNAGRDDGNVA SFNKALANLASSGVLGKRRLVGLYVGWRGKSMHGLYSENLTYWDRKAVAEEVGRGGVA ELFAQLERIDRKDRNYLVIVGHSFGGAITLGALHDPLLERLLALQDGQRIRAFGDAVI MLNPAIEANQGLLLKENSLKVGALGTQPPPLLYVISSHGDSATHFAFPLGQWVGVNLT WSQVDLDRTYNGTRYRLREEDLDTTALGNYSLYRTALLIDRECPLPDGSDNCAPRPPE PRVIDDTDIGKWRFRSFCSADGGNADPALPRMPCYSNEPVNFIYTSQSFIADHNDIFN DQVIAFMATAVSKAIYERTAGASYYRECHDPVRKNFSFGKCFDFHYLKATAMHRRLQR QLSEPGTRSEQDVLYENPL" misc_feature complement(<2058662..2059090) /locus_tag="PA1888" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene 2059569..2060552 /locus_tag="PA1889" /db_xref="GeneID:879177" CDS 2059569..2060552 /locus_tag="PA1889" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250580.1" /db_xref="GeneID:879177" /translation="MGRTVEDVDMLNHHFRVCSATVYRPPGDGCQSATSQPSAWWMAA KESRSGQLRRVEHVAFEGHPAAVLAGRAVEDRAVVGEADGQAEADVGSVLRGVQLAFE VQLEHARLDAFQADGDVRVVHGLAFAAALLGADGEGHGVSVHVLLQLAWGRRRQRGGQ TTGRRAGWPVLAAVGAARGLGIIRRRRSPTAHHQPTPEGMMKLPVLAVLGAALLLSAC AKKEAEACASPDVKDQLMRIFLQGAITERSPEFKDSALRDVAILEKDPDSGVLSCVGT LSVPAGQQVVEGVLQYRIAPVAKSDYDYLLLDTAGANTTALAQRLNKALGQ" gene complement(2060566..2061189) /locus_tag="PA1890" /db_xref="GeneID:880567" CDS complement(2060566..2061189) /locus_tag="PA1890" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutathione S-transferase" /protein_id="NP_250581.1" /db_xref="GeneID:880567" /translation="MLEILGKASSINVRKVLWTCAELDLPYRREDWGSGFRDTHAAEF LALNPNAMVPVLRDGELVLWESNSIIRYLANRYAGERLYPQQAAPRARVDQWLDWQAS DLNRSWSYAFMSLVRQSPAHRDAAQVEASLRGWTGFMEILEGQLLRTGAYVAGETFSL ADIAIGLSVNRWYETPFEHPSLPAVRAYYERLGARPGFLAHGRNGVP" misc_feature complement(2060590..2061189) /locus_tag="PA1890" /note="Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]; Region: GstA; COG0625" /db_xref="CDD:440390" gene complement(2061278..2061667) /locus_tag="PA1891" /db_xref="GeneID:878094" CDS complement(2061278..2061667) /locus_tag="PA1891" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250582.1" /db_xref="GeneID:878094" /translation="MSGLAQRSDDPWLAALPAAVLYGAWAAYANQDGGLAGMGVAALL QGAASLLATRFGLYLLQCLGRRHGLAQRQAPLLVVLLLTAPMAALHWLSGTPHPLASV APSFVIGWLYFALWARRRPGRRQASGA" gene complement(2061664..2062401) /locus_tag="PA1892" /db_xref="GeneID:882161" CDS complement(2061664..2062401) /locus_tag="PA1892" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250583.1" /db_xref="GeneID:882161" /translation="MTSDPQKNAFDLDYSSRERQFPEGFKRKIVADLQEGMPQFDVLQ YFGNQPDIFETYDHLVLATDPEGERIIGILGAKDFVRGSTRFLYLWTAMVVDRYHRTS LFKRINQFFLRQVSERNGGLPPLIVAKTYNPVVYNMFRALSARIPGATLYPDLEAPRQ SPDMVDLALDVVGTLSANLRLDAETGLIPGGQRSVAPDFFPRMAMSSHARTNDHFVAH VGSSDQILCMVRLAPGAEPYVQQRIIR" gene complement(2062398..2064827) /locus_tag="PA1893" /db_xref="GeneID:878539" CDS complement(2062398..2064827) /locus_tag="PA1893" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250584.1" /db_xref="GeneID:878539" /translation="MSKNARYAWRLSLGGLLLGLLACAVYLLAVPLGFKYGEIQVGHG LEHEGRIAWDAAGVPHIRAQSLEDGYFLLGYSHARDRLWQMEFARRYAGGTLSEVFGA KTLPMDRFARTLGFRRTAEGIYANLDAPTRVLLQRYSDGINAYLELAPAALPLEFSLV RHERPGPWGPVDSLSLHLLYSWTLSANLGMQLQRLALAEHLDLARINEVFAPYPGERP PATRDYASLYRSLHGTPDAGKLLGQLPGSNVEGIGSNNWVVSASRSATGKPLLANDPH LRLTNPAAFYLASLKIPGLSLTGANFAGAPLFVIGHNQRIAWGYTNTGSHIQDAYLER VDPQDPRRYLTPDGYRPFETRLERIAVRDGETVSLEVRSTRHGPVISDIYEPARLPQA QRDRLVIALAWTGLDRHDKTFPSLLAINRAEGWEQFLDAAANFGVPPQNMVYADVEGN IGYVSAGRVPLRGADDDLHGLAPSPGWESRYDWVGYVPESAKPRSLNPREGFIATANQ RIVPPDNAFDFGHDWVLPYRYDRIREWLGGPGQRTLEDSLELQNDEFSSVMASLLPKM LEQVSDPELRASEAFALLQGWNHQAAADLAAPLIAGYWVRAFTRELLQPRIGTQLLAS GWNQRNYDGFLRLILDGQADLRFWCGQEQGCDLKLNQSLRRALDELRAAHGSAPSGWK WGEAHAALAEHVPFHKTPLRALFDLKNNKGGDNFSVNVGRFDYSDPANPFNTRIAATL RMVIDLADFDNSRYALSTRNSGLPFDGATDLNELWARGAYIRIADDAPDATDRQLVLR PSASSSGEPRP" misc_feature complement(2062431..2064719) /locus_tag="PA1893" /note="Acyl-homoserine lactone (AHL) acylase PvdQ [Secondary metabolites biosynthesis, transport and catabolism]; Region: PvdQ; COG2366" /db_xref="CDD:441933" gene complement(2064853..2065545) /locus_tag="PA1894" /db_xref="GeneID:878929" CDS complement(2064853..2065545) /locus_tag="PA1894" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250585.1" /db_xref="GeneID:878929" /translation="MPPTSPTPTNPHPRLPPDHTGNPMNTQIAQITQSLAANGCAYIT PSDALYDEQDWELMNQVLANSTLPWEKILIGDADEENDLYVARFMTDRDRPTVVNHAL SELIIPRVCNDNVMSLFRKLMGDDAFYVRRMQVNRMKAGSFIGRHLDTDSNPDYQYSI VLQLGTYFSGGQFVVYDRDGNLRNDIKPEPRSVIISDCSYPHEVQQVTAGERVSLVFF VSRHADRNRRVY" misc_feature complement(2064889..2065149) /locus_tag="PA1894" /note="2OG-Fe(II) oxygenase superfamily; Region: 2OG-FeII_Oxy_3; pfam13640" /db_xref="CDD:463943" gene complement(2065493..2066767) /locus_tag="PA1895" /db_xref="GeneID:878075" CDS complement(2065493..2066767) /locus_tag="PA1895" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250586.1" /db_xref="GeneID:878075" /translation="MQDELFKTRYSKYGYGIDVRRTYKDLPCQPFWTWVTGKSLNDRP PRRPKDTLLKPWQLYLHISWGYAVFFLAVIYGQQLLASQQPLWLKCLLGALIMCLVVN RQRGFLHTFHYTTHGASLENKALARFTCKWILSIPILHTPRDEYVKLHVNEHHSVRTF NTEHDVDLVFMKQHGFYKGMSESAFWTRLVLAPFHPARILEHLKFRFDVSFVSAPRHE RVSRALYWAALLGLVYASGYLEAFALFYLFPIFILTQYSSWIQHVSEHLWFARNEHGL PRFLHYGSLSWGRFLGRPYPADKQGLAFALAFVRWSLGVLLIDIPLRVFSFMQDLPSH DFHHRKPGVNFWRIAPERAANEARPSKFGPMTETWGMWENFLILRDHLCRGQSDPFGI VDWYRENHARLAPETDAANQPHTNQPASQATA" gene complement(2066786..2067955) /locus_tag="PA1896" /db_xref="GeneID:878630" CDS complement(2066786..2067955) /locus_tag="PA1896" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250587.1" /db_xref="GeneID:878630" /translation="MIPDIDSRLSRNILKSISYGLPLAEVVPDHTYAQLETRLGELKR RYLELRISHGARELPFSNYLFYLILQSRHQEFDFKLRQGNSVVTNIHRFKSKGRIPSL TTLLLADAVNAKSELELKHPDIPQLDRHARDIERWLAAGNVMPPSERALRGLVEALER AAGEGRPLHLVSAVCPDYSHSSDAEGKPRYTFERVGDQPGLAGAKLVSAGQAVAELAR ARQVEIRHAILGGEFEYLSFNRNPATGETREGFLGKVERQLERIAGALPCPAATCSFF EMCGGEDGWHQAHGEIVQRLEQGDYGQTGLDYPALESIFLSRLPLYEKWFASQSREQI WASFVSQAAEYALMGKLFGERFDNFVVLAVDHYRMEPFYSFFATVPTLYIRTDYL" gene complement(2067961..2068728) /locus_tag="PA1897" /db_xref="GeneID:880632" CDS complement(2067961..2068728) /locus_tag="PA1897" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250588.1" /db_xref="GeneID:880632" /translation="MIYYLIGVALFIFMLEQLVPGWKLPKVSTWVARVIFLNIVQVSI ALLAGITWNKWMMGHSLLHTSDALPPLLAGFAAYFVNTFVTYWWHRARHANDTLWRLF HQLHHAPQRIEVFTSFYKHPTEMVFNSLLGSFVAYVVMGISIEAGAYYIMFAALGEMF YHSNLRTPHVLGYLFQRPEMHRIHHQRDRHECNYSDFPIWDMLFGTYENPRRIDEPQG FAGDKEQQFVDMLLFRDVHSLPGKTQPAPVLVKPDVR" misc_feature complement(2068051..2068512) /locus_tag="PA1897" /note="Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]; Region: ERG3; COG3000" /db_xref="CDD:442238" protein_bind complement(2068990..2069015) /experiment="Beta-gal reporter assay [PMID: 16390453]" /experiment="DNAse footprinting [PMID: 16390453]" /experiment="EMSA [PMID: 16390453]" /experiment="Site directed mutagenesis [PMID: 16390453]" /note="Transcription factor binding site for NP_250589.; Evidence of regulation for: PA1897" /bound_moiety="QscR" protein_bind complement(2068996..2069015) /experiment="Beta-gal reporter assay [PMID: 11544214]" /experiment="Site directed mutagenesis [PMID: 11544214]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA1898" /bound_moiety="LasR" gene 2069490..2070203 /gene="qscR" /locus_tag="PA1898" /db_xref="GeneID:880650" CDS 2069490..2070203 /gene="qscR" /locus_tag="PA1898" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="quorum-sensing control repressor" /protein_id="NP_250589.1" /db_xref="GeneID:880650" /translation="MHDEREGYLEILSRITTEEEFFSLVLEICGNYGFEFFSFGARAP FPLTAPKYHFLSNYPGEWKSRYISEDYTSIDPIVRHGLLEYTPLIWNGEDFQENRFFW EEALHHGIRHGWSIPVRGKYGLISMLSLVRSSESIAATEILEKESFLLWITSMLQATF GDLLAPRIVPESNVRLTARETEMLKWTAVGKTYGEIGLILSIDQRTVKFHIVNAMRKL NSSNKAEATMKAYAIGLLN" misc_feature 2069538..2069969 /gene="qscR" /locus_tag="PA1898" /note="Autoinducer binding domain; Region: Autoind_bind; pfam03472" /db_xref="CDD:427319" misc_feature 2070009..2070179 /gene="qscR" /locus_tag="PA1898" /note="helix_turn_helix, Lux Regulon; Region: HTH_LUXR; smart00421" /db_xref="CDD:197715" protein_bind complement(2070529..2070541) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 2070535..2070547 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 2070685..2071173 /gene="phzA2" /locus_tag="PA1899" /db_xref="GeneID:878477" CDS 2070685..2071173 /gene="phzA2" /locus_tag="PA1899" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phenazine biosynthesis protein PhzA" /protein_id="NP_250590.1" /db_xref="GeneID:878477" /translation="MREYQRLKGFTDNLELRRRNRATVEHYMRMKGAERLQRHSLFVE DGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDWEWHNVRIFETEDPNHFWVECD GRGKALVPGYPQGYCENHYIHSFELENGRIKRNREFMNPMQKLRALGIAVPQIKRDGI PT" misc_feature 2070688..2071170 /gene="phzA2" /locus_tag="PA1899" /note="Phenazine biosynthesis protein A/B; Region: PHZA_PHZB; pfam03284" /db_xref="CDD:397400" gene 2071209..2071697 /gene="phzB2" /locus_tag="PA1900" /db_xref="GeneID:878211" CDS 2071209..2071697 /gene="phzB2" /locus_tag="PA1900" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phenazine biosynthesis protein PhzB" /protein_id="NP_250591.1" /db_xref="GeneID:878211" /translation="MLDNAIPQGFEDAVELRRKNRETVVKYMNTKGQDRLRRHELFVE DGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNIKVFETDDPNHFWVECD GHGKILFPGYPEGYYENHFLHSFELDDGKIKRNREFMNVFQQLRALSIPVPQIKREGI PT" misc_feature 2071212..2071694 /gene="phzB2" /locus_tag="PA1900" /note="Phenazine biosynthesis protein A/B; Region: PHZA_PHZB; pfam03284" /db_xref="CDD:397400" gene 2071721..2072938 /gene="phzC2" /locus_tag="PA1901" /db_xref="GeneID:882061" CDS 2071721..2072938 /gene="phzC2" /locus_tag="PA1901" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phenazine biosynthesis protein PhzC" /protein_id="NP_250592.1" /db_xref="GeneID:882061" /translation="MDDLLQRVRRCEALQQPEWGDPSRLRDVQAYLRGSPALIRAGDI LALRATLARVARGEALVVQCGDCAEDMDDHHAENVARKAAVLELLAGALRLAGRRPVI RVGRIAGQYAKPRSKPHEQVGEQTLPVYRGDMVNGREAHAEQRRADPQRILKGYAAAR NIMRHLGWDAASGQEANASPVWTSHEMLLLDYELSMLREDEQRRVYLGSTHWPWIGER TRQVDGAHVALLAEVLNPVACKVGPEIGRDQLLALCERLDPRREPGRLTLIARMGAQK VGERLPPLVEAVRAAGHPVIWLSDPMHGNTIVAPCGNKTRLVRSIAEEVAAFRLAVSG SGGVAAGLHLETTPDDVTECVADSSGLHQVSRHYTSLCDPRLNPWQALSAVMAWSGAE AIPSATFPLETVA" misc_feature 2071757..2072866 /gene="phzC2" /locus_tag="PA1901" /note="Class-II DAHP synthetase family; Region: DAHP_synth_2; cl03230" /db_xref="CDD:470763" gene 2072935..2073558 /gene="phzD2" /locus_tag="PA1902" /db_xref="GeneID:881873" CDS 2072935..2073558 /gene="phzD2" /locus_tag="PA1902" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phenazine biosynthesis protein PhzD" /protein_id="NP_250593.1" /db_xref="GeneID:881873" /translation="MSGIPEITAYPLPTAQQLPANLARWSLEPRRAVLLVHDMQRYFL RPLPESLRAGLVANAARLRRWCVEQGVQIAYTAQPGSMTEEQRGLLKDFWGPGMRASP ADREVVEELAPGPDDWLLTKWRYSAFFHSDLLQRMRAAGRDQLVLCGVYAHVGVLIST VDAYSNDIQPFLVADAIADFSEAHHRMALEYAASRCAMVVTTDEVLE" misc_feature 2072941..2073543 /gene="phzD2" /locus_tag="PA1902" /note="Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of a vinyl ether, an uncommon reaction in biological...; Region: isochorismatase; cd01013" /db_xref="CDD:238495" misc_feature order(2072944..2072946,2073061..2073063,2073214..2073216, 2073307..2073309,2073385..2073387,2073394..2073396, 2073472..2073474) /gene="phzD2" /locus_tag="PA1902" /note="hydrophobic substrate binding pocket [active]" /db_xref="CDD:238495" misc_feature order(2073046..2073048,2073166..2073168,2073193..2073195, 2073298..2073300,2073385..2073387,2073397..2073399) /gene="phzD2" /locus_tag="PA1902" /note="active site" /db_xref="CDD:238495" misc_feature 2073382..2073387 /gene="phzD2" /locus_tag="PA1902" /note="conserved cis-peptide bond [active]" /db_xref="CDD:238495" gene 2073555..2075438 /gene="phzE2" /locus_tag="PA1903" /db_xref="GeneID:882029" CDS 2073555..2075438 /gene="phzE2" /locus_tag="PA1903" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phenazine biosynthesis protein PhzE" /protein_id="NP_250594.1" /db_xref="GeneID:882029" /translation="MNALPTSLLQRLLERPAPFALLYRPESNGPGLLDVIRGEALELH GLADLPLDEPGPGLPRHDLLALIPYRQIAERGFEALDDGTPLLALKVLEQELLPLEQA LALLPNQALELSEEGFDLDDEAYAEVVGRVIADEIGRGEGANFVIKRRFQARIDGYAT ASALSFFRQLLLREKGAYWTFIVHTGERTLVGASPERHISVRDGLAVMNPISGTYRYP PAGPNLAEVMEFLDNRKEADELYMVVDEELKMMARICEDGGRVLGPYLKEMAHLAHTE YFIEGQTSRDVREVLRETLFAPTVTGSPLESACRVIRRYEPQGRGYYSGVAALIGGDG QGGRTLDSAILIRTAEIEGDGRLRIGVGSTIVRHSDPLGEAAESRAKASGLIAALKSQ APQRLGSHPHVVAALASRNAPIADFWLRGASERQQLQADLSGREVLIVDAEDTFTSMI AKQLKSLGLTVTVRGFQEPYSFDGYDLVIMGPGPGNPTEIGQPKIGHLHLAIRSLLSE RRPFLAVCLSHQVLSLCLGLDLQRRQEPNQGVQKQIDLFGAAERVGFYNTFAARALQD RIEIPEVGPIEISRDRETGEVHALRGPRFASMQFHPESVLTREGPRIIADLLRHALVE RRP" misc_feature 2073921..2074697 /gene="phzE2" /locus_tag="PA1903" /note="chorismate binding enzyme; Region: Chorismate_bind; pfam00425" /db_xref="CDD:425674" misc_feature 2074863..2075408 /gene="phzE2" /locus_tag="PA1903" /note="Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase; Region: GATase1_Anthranilate_Synthase; cd01743" /db_xref="CDD:153214" misc_feature order(2074998..2075003,2075007..2075009,2075100..2075105, 2075112..2075114,2075220..2075231) /gene="phzE2" /locus_tag="PA1903" /note="glutamine binding [chemical binding]; other site" /db_xref="CDD:153214" misc_feature order(2075100..2075102,2075355..2075357,2075361..2075363) /gene="phzE2" /locus_tag="PA1903" /note="catalytic triad [active]" /db_xref="CDD:153214" gene 2075452..2076288 /gene="phzF2" /locus_tag="PA1904" /db_xref="GeneID:879183" CDS 2075452..2076288 /gene="phzF2" /locus_tag="PA1904" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="trans-2,3-dihydro-3-hydroxyanthranilate isomerase" /protein_id="NP_250595.1" /db_xref="GeneID:879183" /translation="MHRYVVIDAFASEPLQGNPVAVFFDCDDLSGERMQRMAREMNLS ESTFVLRPQQDGDARIRIFTPVNELPFAGHPLLGTAIALGAETDKDRLFLETRMGTVP FALERQDGKVVACSMQQPIPTWEHFSRPAELLAALGLKGSTFPIEVYRNGPRHVFVGL ESVAALSALHPDHRALCDFPDLAVNCFAGAGRHWRSRMFSPAYGVVEDAATGSAAGPL AIHLARHRQIPYGQQIEILQGVEIGRPSRMYARAEGAGERVSAVEVSGNGAAFAEGRA YL" misc_feature 2075470..2076273 /gene="phzF2" /locus_tag="PA1904" /note="Phenazine biosynthesis-like protein; Region: PhzC-PhzF; pfam02567" /db_xref="CDD:396907" gene 2076311..2076958 /gene="phzG2" /locus_tag="PA1905" /db_xref="GeneID:880482" CDS 2076311..2076958 /gene="phzG2" /locus_tag="PA1905" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyridoxamine 5'-phosphate oxidase" /protein_id="NP_252905.1" /db_xref="GeneID:880482" /translation="MMGVNANISESLTGTIEAPFPEFEAPPANPMEVLRNWLERARRY GVREPRALALATVDGQGRPSTRIVVIAELGERGVVFATHADSQKGRELAQNPWASGVL YWRESSQQIILNGRAERLPDERADAQWLSRPYQTHPMSIASRQSETLADIHALRAEAR RLAETDGPLPRPPGYCLFELCLESVEFWGNGTERLHERLRYDRDEGGWKHRYLQP" misc_feature 2076341..2076955 /gene="phzG2" /locus_tag="PA1905" /note="phenazine biosynthesis FMN-dependent oxidase PhzG; Region: phena_PhzG; NF038138" /db_xref="CDD:468380" gene complement(2077047..2077583) /locus_tag="PA1906" /db_xref="GeneID:881995" CDS complement(2077047..2077583) /locus_tag="PA1906" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250596.1" /db_xref="GeneID:881995" /translation="MHIPPELIIHQTRHWTLNQRIDSALPGYCMLGSRQPATAFHQLP EQALAEFGPLLARVEREMDALLRPRRIYVGRYGHMPGLPVHFHLIPLYDWVEELFWED TRYRTLQQFGVPTAEPLTDGAELTLFVWREFCERADPPAGRGMDRQQAIAGLRRTFGY GVQPRTSSGPDSESAQDA" misc_feature complement(2077284..2077571) /locus_tag="PA1906" /note="Purine nucleoside phosphoramidase/Ap4A hydrolase, histidine triade (HIT) family [Nucleotide transport and metabolism, General function prediction only]; Region: HinT; COG0537" /db_xref="CDD:440303" gene complement(2077626..2079266) /locus_tag="PA1907" /db_xref="GeneID:879184" CDS complement(2077626..2079266) /locus_tag="PA1907" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250597.1" /db_xref="GeneID:879184" /translation="MTAVDLLLVATLLAALLAWWIPALPGRRGLLALASTLALGAGLY AAWDDRWQAGVGAFAGFSLLLGACLRRKPERGLPFRTGSLYGLLVLLAIAALYLFPVA PLPAPSGPYAVGVRDFELDDPSRPGLLGTPAGQPRRLLVRAWYPARPIAGAAPRHYFD PGEARSTARGFGEILGFPPLLTYLKHLRTNSYPDAPLRDDSARLPVVFYSHGYSAFAG GNWTLMEELASHGYAVYAIQHSGDASPTRLPDGTLLPMDPGLVEHLRRAAHDGLPQAM RQGYVSDDLDQRLDGQLHTALDLPAPANRAVNLSAPVWLADRLFVHDRLQAGEVPDRV ADLVAASDFAHTGEMGMSFGGSTTGAVCMVDRRCAAAVNLDGGDFDFAPFDSDFPAPL LMLHADLGNFYRLFGIEPPARPRSFNDFSYERFEHAGQRQDIHRLVLRDSAHAGLTDN PLFIRRPLRDGLLGSAPTEVLIQAPNALVLGFFDHYLRGRANDFPQAQMARFPAWLTR YDNSAVRDWWLAKPEAQRLALRQRIDEMKRRKTGLDLP" misc_feature complement(2077779..2078963) /locus_tag="PA1907" /note="Predicted dienelactone hydrolase [General function prediction only]; Region: COG4188" /db_xref="CDD:443342" gene complement(2079263..2080474) /locus_tag="PA1908" /db_xref="GeneID:877833" CDS complement(2079263..2080474) /locus_tag="PA1908" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_250598.1" /db_xref="GeneID:877833" /translation="MTTPPPSANTLDLRPLMFETFVCTLAVMSFVALVGPLARKLGLA PWQAGAAVTVGGIAWMLAARPWGIASDRHGRRRILLGGLAGFALSYGSLCLFIVLALH WTLPTLFAFAGIVLLRGLAGGFYAAVPACTAALVADHVEAQRRAAALAGLGAASAIGM VIGPGLAGLLATHGLVLPLLVTGALPLVALLALWRWLPREERRQPNRGAALAIGDRRL RRPLAVGFVAMFSVTVAQITVGFFALDRLRLDSADAARVAGIALTAVGVALILAQLLV RRLDWPPPRLIRFGGLVAAIGFAAVCFADSPPLLWLAFFVAAAGMGWVFPAVSALNAN AVRAEEQGAAAGTLVAVHGFGLISGPLLGALLHQLDSRAPYALVGLLLALAAFWPSQP TRPVETRSEAP" misc_feature complement(2079368..2080438) /locus_tag="PA1908" /note="Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; Region: MFS_SLC46_TetA_like; cd17330" /db_xref="CDD:340888" misc_feature complement(order(2079407..2079409,2079416..2079421, 2079428..2079433,2079440..2079442,2079488..2079490, 2079500..2079502,2079512..2079517,2079656..2079658, 2079668..2079670,2079764..2079766,2079773..2079781, 2079788..2079793,2079800..2079802,2079995..2079997, 2080004..2080009,2080016..2080018,2080076..2080078, 2080085..2080093,2080097..2080102,2080286..2080288, 2080391..2080393,2080400..2080405,2080412..2080417)) /locus_tag="PA1908" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340888" gene complement(2080661..2081812) /locus_tag="PA1909" /db_xref="GeneID:877697" CDS complement(2080661..2081812) /locus_tag="PA1909" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250599.1" /db_xref="GeneID:877697" /translation="MTAKTLRTWYLVHKWTSLISTIFLLMLCLTGLPLIFHEEIEHYF EPHPQLEPLTAESPRIDYDDVIARALAARPGEVVRFLVFEKDDPLGLVISAPSLVPPP ENGHMQPFDARTGEFFDALPPPGGFMYLMLKLHTDLFLGLPGYLFLGLMGLLLVASLV SGVVVYTPFMRKLDFATVRAERSRRLKWLDLHNLLGIVTLSWVLVVGVTGVINTLALP ILMLWQGGQLAEMTAPYKDAPPLQRLGSLDAALATARRAAPDMEVSFVGFPGTQFSSQ HHYAVFMRGNTPLTERLLKPALIDAQSGELTDMREMPLYVKTLLLSQPLHFGDYGGMP LKIVWALLDLVSIVILASGLYLWLGRRKTPLEKRLAELPDGSLATEGKA" misc_feature complement(2080679..2081806) /locus_tag="PA1909" /note="PepSY-associated TM region [Function unknown]; Region: PiuB; COG3182" /db_xref="CDD:442415" gene complement(2081853..2084267) /gene="femA" /locus_tag="PA1910" /db_xref="GeneID:880720" CDS complement(2081853..2084267) /gene="femA" /locus_tag="PA1910" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="ferric-mycobactin receptor FemA" /protein_id="NP_250600.1" /db_xref="GeneID:880720" /translation="MPVRTLRPRSLSLAIHAAAMTLALAGAAPALLAAEAPAASSARS YDIAPGPLGRTLSAFASDNGVSLAFDPALTEGRRSAALRGRYAPVEALHRLLLGSGLE LQQRSDGSYTLVPAATDGALELQSSLITAQAAGAETLPAEYAGGQVARGARLGMLGNA DVMDAPFSITSYTARTIEQQQARSVADLLQANDPSVRVVGGRGDLVDSYTIRGFSVQN ADVAFNGLYGLLPFWRVPIEFAERVEVLKGPNALLGGISPGGSVGGTINLVPKRADDQ PLTRVSVDWTQRGQLGTHLDIGRRFGENNAFGVRFNGVYRNGDTAVDHQSREFPMLSL GLDFRGERLRLSSDLLYQKESLEGVVRPLLTGPGTTHIPHAPDSKTRFGLRDSYLDQE DYSMVNRGEYDLADNLTAFASIGGRQSNYETIAANSILVGNQGDIVNSLARQRGDRRT YSAEVGLRGNFDTGPLRHDWTLSANRLHERLGMVYAFTGMQSGNLYQTSPHTPLPDFS SLDGSIPKTNETDLGGVALADRLSFLEDRVQVTLGVRRQQIESRNYDQTSGARTSHDK RHVWTPMASVLVKPLQDLSLYANYIQGLSQGEAAPMTAANAGQVLAPYKAEQYEIGAK YDLGGFTTTLALFEIRKPNAYTDASNVFRADGEQRNRGVELSLYGEPLDGVRVMAGAT YIKPEQNKTGDPASEGKDAPGVARRQANLGVSWDTPFVDGLTLDSRWIYTGSAYVDSA NALAVPHWNRVDLGAAYAFQVAGKPLVARANLENALGKDYWTAANGYLSISSPRTLSL SLTADF" misc_feature complement(2083920..2084075) /gene="femA" /locus_tag="PA1910" /note="Secretin and TonB N terminus short domain; Region: STN; smart00965" /db_xref="CDD:198033" misc_feature complement(2081856..2083799) /gene="femA" /locus_tag="PA1910" /note="Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; Region: Fiu; COG4774" /db_xref="CDD:443806" gene complement(2084476..2085426) /gene="femR" /locus_tag="PA1911" /db_xref="GeneID:878132" CDS complement(2084476..2085426) /gene="femR" /locus_tag="PA1911" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="sigma factor regulator FemR" /protein_id="NP_250601.1" /db_xref="GeneID:878132" /translation="MNAADEGRIPSPILDEAAEWLVRLQDSGCTDDTRQACAQWRQRS PQHAHAWERAERLLQCLGRLPPALALPTLGRERGLDRRRAIKHLALVLGGASLGLATW QAEPLRDWLADQRTGVGEQRRLTLPDGSLLTLNTDSAVDLAFDASQRLVRLLRGEIFV DSRADPRPFRVATAEARLHAGAARFNVRQEMAATRVAVLAGRVELSPLHGRGRWLESG ESVRLGADGEARRLAFDGLPDAWTRGMLMADRMPLAEVLAELARYRRGVLRCDPQLAR LAVSGAYPLLDLRRTLGMLQATYPLKVRGVTDYWISLVPA" misc_feature complement(2084479..2085387) /gene="femR" /locus_tag="PA1911" /note="fec operon regulator FecR; Reviewed; Region: PRK09774" /db_xref="CDD:236622" gene complement(2085423..2085929) /gene="femI" /locus_tag="PA1912" /db_xref="GeneID:878255" CDS complement(2085423..2085929) /gene="femI" /locus_tag="PA1912" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="ECF sigma factor FemI" /protein_id="NP_250602.1" /db_xref="GeneID:878255" /translation="MPPADASLHDAVSHLYQDHHGWLQGWLRRRLGCAENAADLAQDT FARLLASRRVLDAREPRAYLTTVAKGLMINWFQRQSLERAYLDALANLPEDLAPPPEQ RLMVLETLHEVDALLGSLPDRVRQAFLLAQIEGLKYEAIAERLGVSLGSVKRYMQQAF RQCLELME" misc_feature complement(2085441..2085899) /gene="femI" /locus_tag="PA1912" /note="RNA polymerase sigma factor; Provisional; Region: PRK12528" /db_xref="CDD:171561" gene complement(2086021..2086701) /locus_tag="PA1913" /db_xref="GeneID:880930" CDS complement(2086021..2086701) /locus_tag="PA1913" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250603.1" /db_xref="GeneID:880930" /translation="MAFDAARYVHRYYASLAPAPGNEYPRLRAWEYLWEYVWDPSRSW DDLTAPEQLDTTALHLGFYLANWGMFRGSSGLLQNSNLDLMKALARQLFSGAGPELFE LSLVDFAGNGARLAHNRKLLETVLGSMDALSSRVSWTDTLKSKILLGVWGEFPALDRH YVAACRALYPRRGLTSVNGGTLTALHRLIGEERLSFPRLETARKGLLYPTGRLADMAF FQYGLENA" gene complement(2086808..2088034) /locus_tag="PA1914" /db_xref="GeneID:878271" CDS complement(2086808..2088034) /locus_tag="PA1914" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250604.1" /db_xref="GeneID:878271" /translation="MNGSRSTFLYLLAAAGLALTPAAQADRGNDVVARLNQLYNDTRQ DCGGPSKPAFLCSGVLFRATWPSTDYMFYSISPKSQKSGGVSASYLRKDAKYRKLAYG LKSGFIFDTIFGNPKDHQDYAVLCSFPIDAATDDRAQQGCTDSRRTPNSVEKSCQDIN VSTAEQWAANYRQNRGDHSRQCSFDVRDERNTAAGPAFYQSIRAMAQIADESFTTQNE LRLAKWEENPPKSPSILAAFYTEDAGLEGARLNQIQWYQSVQAFLPIINMRLPQTRQQ DAQFAYDGRKQAIYPTSEKNACERYVESATWVERDDPGFRKKIMTLEVVPTDCGRKIQ DNQTNNFFNELVVDHYLDSEWKDNPDNRDSNIGSMRRQLVCHFNVARNKPEWNLEPSR PYTSNEDSIAKGCNNT" misc_feature complement(2086811..2087131) /locus_tag="PA1914" /note="Protein of unknown function (DUF2599); Region: DUF2599; pfam10783" /db_xref="CDD:431493" protein_bind complement(2088303..2088318) /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA1914" /bound_moiety="LasR" protein_bind complement(2088308..2088323) /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA1914" /bound_moiety="LasR" gene complement(2088602..2090149) /locus_tag="PA1915" /db_xref="GeneID:878593" CDS complement(2088602..2090149) /locus_tag="PA1915" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250605.1" /db_xref="GeneID:878593" /translation="MPQSIRHLIALPELRSRLLSGAGGLDRPVRWAHVCELDDPTEWL GEGDLLMTTGLGIPSDAERQRRYVRRLAEAGLAGMMIGENMEAPSDLDALRETAEALG FPLILTHYGVPFAAVTRAIVDAGQKDEYERRNALARIYESARLSMQGLGLPALLQRLG KDVRSSLYLIVPDTLAAWQPGLPGLPVELADALRNRRREQAEPQPMVLRHPLAEGEAL SIGIPSDRNCLLIALGERLPDYSLLHHLTAVLGIEIERLRVESERHLRLGSELLDDLL QRRLYREQAEERLEELLPGLDLDDAVVSVASSEGLATDPFGLFRGHDSRLLVRAQGQE IILLHQAGLASTLQEALDSSLGVSAPLRRAERCAEALREARLALAHSHSRRPLCRYAE LDDEAPWLPRSLAEAERAFRLVLGALHDYDAANGSALLHTLQVFLEENRSWLNAAQRL HIHKQSLVYRIRRIEEISGRSLDSTADVATLWFALQATRLSPEARGRTAKGSLLEQSA HHGGDMD" misc_feature complement(2089778..2090128) /locus_tag="PA1915" /note="Purine catabolism regulatory protein-like family; Region: PucR; pfam07905" /db_xref="CDD:462312" misc_feature complement(2088680..2089417) /locus_tag="PA1915" /note="Sugar diacid utilization regulator CdaR [Transcription, Signal transduction mechanisms]; Region: CdaR; COG3835" /db_xref="CDD:443046" gene complement(2090213..2091445) /locus_tag="PA1916" /db_xref="GeneID:877986" CDS complement(2090213..2091445) /locus_tag="PA1916" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_250606.1" /db_xref="GeneID:877986" /translation="MGMREANDNASGLKAHPLGSLETIAIIIGTNIGAGVLSMAYAAR KVGYVPLLVCLALTCLFCIVTMLYVTEACLRTRGNNQLSGLSRRYLGPLGGWLIFIAV AANSYGALVAYMTGSGNIMLEFFGQYGLTRQVGSLIFFVPSALVLYLGLKALGVGEKL ISAGMVAIVCILIGATLMHDDARLAHLWQSQWQYVVPVFNLAVFVFGAQFLVPELVRG NLATPGRVPRLIVVGMLLTFLLVAAIPASVIALVGPDNLSEVATLSWGRSLGQWAYYV ANTFALLAMLTSYWGLGGCLFTNIFDHFRLGSETNRRKRLAVLAAVSVPPFLLAYAGL GGFVNALYFAGTFGGVLMGIIPILLLNAARRHGDQLPAFSCGWYAHPLIQGLIVLVFA SSGVYAIASALGMLPASW" misc_feature complement(2090333..2091370) /locus_tag="PA1916" /note="Solute carrier families 5 and 6-like; solute binding domain; Region: SLC5-6-like_sbd; cl00456" /db_xref="CDD:444915" gene complement(2091490..2091837) /locus_tag="PA1917" /db_xref="GeneID:877823" CDS complement(2091490..2091837) /locus_tag="PA1917" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250607.1" /db_xref="GeneID:877823" /translation="MNPSLIRLDDESPFTSPTPVGQPLGEPVALTRTAAHRPLADGNG VTGIWECTPGRFRRQVEQAEYSYIVSGEGRFTPDEGQAVEFRAGDALYFAAATQGTWD IRQTVRKTYLIFD" misc_feature complement(2091496..2091813) /locus_tag="PA1917" /note="Predicted enzyme of the cupin superfamily [General function prediction only]; Region: COG3450" /db_xref="CDD:442673" gene complement(2091850..2093250) /locus_tag="PA1918" /db_xref="GeneID:878625" CDS complement(2091850..2093250) /locus_tag="PA1918" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250608.1" /db_xref="GeneID:878625" /translation="MKLTLTPPLTPSHWMRSTDLADATSAPLVGTHSADVAIVGGGFV GLWTAITLKQLEPDARVLLLEQDVCGGGASGRNGGFVMSWWPKIGTLLGFCSEAQARF LGESAERAIQELGEFCARHDIDAHFQQKGWLWTATTAHHLDAWNDTLAACERLGVSPF ERLDASEVARRTGSPVHLAGVFERSNATVQPALLVQGMRRVALALGVEIHERCGVSQI VPGQPAQLLSAGARVQAKAVVLATNAWSAALPRLSRLIVPVNSSIAVTEAIPQRLERI GWTGGEAITDSQLMVDYYRTTRDGRIAFGKGTGALSYGSRIGRVFDVDRESLALTEAD FRRTYPSLGDIPLVDGWSGPIDRTYDSLPVFGRLHENIHYGIGWSGNGVGPSRLGGRI LASLALGRDDPWSRCPLVERRCRSFPPEPLRYLGGSLVRNAVLRKERAELAGTAPSAT DRFLARFAPAGLEDKS" misc_feature complement(2092012..2093157) /locus_tag="PA1918" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" gene complement(2093444..2094142) /gene="nrdG" /locus_tag="PA1919" /db_xref="GeneID:880910" CDS complement(2093444..2094142) /gene="nrdG" /locus_tag="PA1919" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="class III (anaerobic) ribonucleoside-triphosphate reductase activating protein NrdG" /protein_id="NP_250609.1" /db_xref="GeneID:880910" /translation="MSATLRVGGLVPLTTLDYPGLLACVLFCQGCAWRCRYCHNPELI APRGAEEIPWPRLLDFLRRRQGLLQAVVFSGGEATLQAALGDAMRTVRELGFRVGLHS AGINPRAFARVLAQSDWVGFDVKAPAEDVAAITGVDGSGAANWRSLECLLVSGVAYEC RTTVHWRLFDSERLWRLATRLREMGVERFAVQLARPARQLDPQLLAKPAPQGAAQLWR ELEELFPAFELRDA" misc_feature complement(2093558..2094127) /gene="nrdG" /locus_tag="PA1919" /note="anaerobic ribonucleoside-triphosphate reductase activating protein; Region: NrdG2; TIGR02495" /db_xref="CDD:274164" gene complement(2094329..2096356) /gene="nrdD" /locus_tag="PA1920" /db_xref="GeneID:882172" CDS complement(2094329..2096356) /gene="nrdD" /locus_tag="PA1920" /EC_number="1.17.4.2" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="anaerobic ribonucleoside triphosphate reductase" /protein_id="NP_250610.1" /db_xref="GeneID:882172" /translation="MTQPRKATWPATLLKRNGREVPFDPGKIERAIAAAGQATGEFDP QQAQALAERVVERLPERACLDIERVQDLVERVLMEAGHYPTARAYVVYRERHGRLRRE RKTLVDVAASMNEYLSREDWRVRANANQGYSLGGLILNVSGKVTANYWLDEVYDADIA AAHRDADLHIHDLDMLAGYCAGWSLRTLLNEGLNGVPGRVEAGPPKHLGSALGQMVNF LGTLQNEWAGAQAFSSFDTYLAPYVRKDRLDYASVRQALQEFIYNLNVPSRWGTQTPF TNLTFDWVCPDDLRDQVPRIGGEEMPFAYGELQAEMDLINRAYIEVMQAGDAHGRVFT FPIPTYNITHDFPWDSDNATRLFEMTARYGLPYFQNFLNSDMQPNQVRSMCCRLQLDV RELLKRGNGLFGSAEQTGSLGVVTINCARLGYRHRGDAAGLYRQLDHLLELAFASLEL KRKVIQQHMDAGLYPYTRRYLGTLRNHFSTIGVNGLHEMVRNFSDDREGLHSEAGREM ALALLDHVRARLVGFQEDSGHLYNLEATPAEGTTYRFAREDRKRYPRILQAGTPEAPY YTNSSQLPVGFTDDPFEALELQDALQCKYTGGTVLHLYMAERISSAEACKTLVRTALG RFRLPYLTVTPTFSICPRHGYLAGEHEFCPKCDEELLQRSTPKSCCGGCGG" misc_feature complement(2094368..2096329) /gene="nrdD" /locus_tag="PA1920" /note="ribonucleoside triphosphate reductase; Region: PRK08270" /db_xref="CDD:236212" gene complement(2096514..2097323) /locus_tag="PA1921" /db_xref="GeneID:882274" CDS complement(2096514..2097323) /locus_tag="PA1921" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250611.1" /db_xref="GeneID:882274" /translation="MTATEQIMALLERWDRQQEGYIRQREERYEAMFQLLEDLFGRDG RFTAIDAACGPGSLGRRLLERFPAARVVALDADVMLLEIARTALAGFAERVRVVECDL TDPGWTERVAEARESLAGERPAALLSSTALHWLSPAELAGFYAQAGELLAPGGVLLNA DHMRYDRRWPGLAELSRKHRERVLQASVASGADSWEDWWQRAAQIPRLAPLKAQRDAH FARRPLRRASEDEDCSLDFHLAALRQAGFAEAATVWQQLDNYVVFARLAQA" misc_feature complement(2096850..2097185) /locus_tag="PA1921" /note="Trans-aconitate methyltransferase [Energy production and conversion]; Region: Tam; COG4106" /db_xref="CDD:443282" gene 2097491..2099452 /locus_tag="PA1922" /db_xref="GeneID:882181" CDS 2097491..2099452 /locus_tag="PA1922" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="TonB-dependent receptor" /protein_id="NP_250612.1" /db_xref="GeneID:882181" /translation="MTPHSSPHRLPPLRLARAVPFLYLLPCLALAAPVDLEPTVVSAT TTERKLRDAPASVSLIAAEDLRRRPVRDLQEALRGSESLQFNGVGMSRRGISVRGMSS EHTLVLVDGQRISTSSGAIAHSDFDLGWVPVESIERIEVVRGPMSSLYGSEALGGVVN VITRRATDTWTGSGLLDGGVREDGLGGQSHQLGAYLAGPLVPGKLGLALNGESRRQQE TPDADERRLSELEGGNADSGGLNLSWTPDDAQRIDLGHQRGRERRWRNSETGGPRSRY YESRDVIERERWSLAHNGQWDWGSSQLRTYRNRLERHNARSDGQPPSNPQRLTDSVVD GHLSVPAFERHLFTLGGEWRKEELEDRSVNTAGDASARHKALFLQDEIAFGPDWSLTL GSRFDKHEAFGWESSPRLYLLHHLSDVLTLRAGVGRGYKAPSLKQLSPEYAAVGGGGR FTIYGNPDLKPETNTSYELGADYQGDGWSLKGTVFENDVRDLIQTVCVARCGVRGGEI RNYENVDRARIRGLELGGGVDLPADLRWELNYTYLDARNRTAGQRLGDRSRHLANSQL RWSPNVRFSAQLRTEYVGSQVAYSSNVGYALPAYSLWHLELSQKLSENLTLRGGIENL GDQRLADDDTHFTYAEPGRTFHLGLVASF" misc_feature 2097575..2099449 /locus_tag="PA1922" /note="catecholate siderophore receptor CirA; Provisional; Region: PRK10064" /db_xref="CDD:236646" gene 2099452..2103297 /locus_tag="PA1923" /db_xref="GeneID:882138" CDS 2099452..2103297 /locus_tag="PA1923" /EC_number="6.6.1.2" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="cobaltochelatase subunit CobN" /protein_id="NP_250613.1" /db_xref="GeneID:882138" /translation="MRRSLLFCGALLASLCAWAEPAQVRLLSSDFVLPGKHQRLAGWA REAGVELRGLRLGIGEAPPGEWLDGGNLLILDTPRPTDRAQVEEALGERLQGGTQPWI RVGGGPPGFGNLPAALGGRLVGYYANGGEANLRRLFEAVRRWHAGLTVDALPAPQPLA QAGFYHPDAPAPFAVLADYLAWGASRWASDAPRIAFLIPRGAIADAQTGAIDELLRRS ERHGQAPLAVWFDDSDPEALRKSFAGADVQALVNLQHLQNGPARRAEFLALDVPVLQT LGYRDGNEADWLAAASGVAPRTAAAFLGMPETWGMSDPLVISALENGEPKLMAGQAEA LLDKLDRLLRLRRLPAADKHLALMFWNHPEGEKNVAASHLNVPASLARLGEALRAAGY RVATSDESALIDTAQRLLGGYYRPQTLDALYRDGLAASLPLDAYLHWFEALPADLREE MRARWGDPRRHWALRDIDGQRRFVFPAARLGNLLLLPQPPRAGRPGEAYHDSAVPPDH LYLAVYQFVREGFGADALIHFGTHGTQEWLPGKDRGLAVGDYPLRALGDLPVFYPYIQ DNVGEAIQARRRGRAVTVSHQTPSFAPAGLYDELRDLHQLIHEYQQLDEGAVRERSAE QIRAAVRAAHMNDDLGWSEAAMHEDFPAFLGVLHDHLHRLAGSAMPLGLHTFGVAASP ELRLGTVMQQLGEPYYRALGLDPDELFAADFRALREGRAYRTLQRYLRDGGEIAKVAD PRLREQLLRARELDRQLADTGELEALLAGLAGRFVAPGPGGDPIRNPQVPSGRNLFAF EADKVPTRAAYEAGAEAFGQLLESYRAEHQGRAPEKLAFSLWSSETMRHLGIVESQAL HALGLRPRWDAGGRLLALDIVPAAELGRPRVDVVLQVTSVYRDQFDGFMRLLAEAIER LAALDEPGNPLARNSQALERRLRERGVEAPLAQRLSRLRLFGNAPGDYGTGVTQLTLD STRWDDDSALAEQFLGRLQYAYGSRDWGVKLDGGNLFAEQLKGVQAAILSRSSTLNGV LSTDHPFEYLGGLSLAVRHLDGASPALYIADLRQRQPRTTAAAQFLASELRGRYLSPQ WIAAMQREGYAGSLEMLDLANNLWGWQAADRIMVRADQWQALHDTFVMDRRELGLAEW FETHNPTAQAQIIARMAEAIRKGYWDASEQTRRELAERWRQLAAAGAGEVGAATTREF IERMAGGFGEAAAQAEGAAASGAGETVSGRVLEEVAPPPSGEPQPWLRLAAAVLLALF AAGAVRQSVVNRRPMENRS" misc_feature 2099452..2103012 /locus_tag="PA1923" /note="cobaltochelatase subunit CobN; Reviewed; Region: cobN; PRK05989" /db_xref="CDD:235663" gene 2103294..2103770 /locus_tag="PA1924" /db_xref="GeneID:878418" CDS 2103294..2103770 /locus_tag="PA1924" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250614.1" /db_xref="GeneID:878418" /translation="MNGLETSLYELTRLFLLPVLLLILAALAYAFVALGGFAMEAWQR RRGRYRSRLAAWQALHGGNSDDLELWIMQRLEWLRITSRSAPMLGLVATMIPMGPALL ALTRNDAQGIGENLVVAFSAVILALVAASITFFILTVRRRWLLQELRAVERAREAG" gene 2103770..2104096 /locus_tag="PA1925" /db_xref="GeneID:882119" CDS 2103770..2104096 /locus_tag="PA1925" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250615.1" /db_xref="GeneID:882119" /translation="MRFLEHDEADDPILSMVNLIDLFLVVIGILLIVIVQNPLNPFSQ DKVVVVENPGEADMRMLVKDGKELKRYQASGEIGEGQGSRAGVTYRLADGRMIYVPES GGEAGK" misc_feature 2103773..2104078 /locus_tag="PA1925" /note="Uncharacterized conserved protein, DUF2149 domain [Function unknown]; Region: COG4744" /db_xref="CDD:443778" gene 2104597..2106447 /locus_tag="PA1926" /db_xref="GeneID:882130" CDS 2104597..2106447 /locus_tag="PA1926" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250616.1" /db_xref="GeneID:882130" /translation="MPGTDAAGCTRIPGKDLPLEQTIANLSAILAGLGMKIEIASWRN IVPNVWSLHIRDAQSPMCFTNGKGASKESALASALGEFIERLNCNFFYNDQYWGEEIA NAAFVHYPDERWFKPGRDDALPLGLLDGHCLAIYDPDGELRGSHLYDTNSGNVQRGIC ALPFVRQSDGQVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKRQILEG ELALPDVPPEVLAKYPGILAGIRGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGV FASFGAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFESHALTEPNNFVEHFIDSSG VVSWRFFSAKADFPFVEWDFTRQGEAANAEEAATLFGILEAMGKQVYMAVYEHLGATA CRILVPGYSEIYPVEDLIWDNTNKALAFREDILNLHRLDDAALGALLERLEDCEVDDY TDITTLIGVEFDDNTVWGQLTILELKVLIGLALKRFEDAKEGVEAFLQYNDNSVERGL FYQALNVVLEVVLDDELEIADYEANFRRMFGDARMDAALGSVDGSVRFFGLTPTSMKL EGLDRHLRLIDSYKKLHAARARMQPVVDGEAGAAAAGGLKPRRMAIRKRK" misc_feature 2104597..2106345 /locus_tag="PA1926" /note="YcaO cyclodehydratase, ATP-ad Mg2+-binding; Region: YcaO; cl19253" /db_xref="CDD:473156" gene 2106580..2108880 /gene="metE" /locus_tag="PA1927" /db_xref="GeneID:877662" CDS 2106580..2108880 /gene="metE" /locus_tag="PA1927" /EC_number="2.1.1.14" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase" /protein_id="NP_250617.1" /db_xref="GeneID:877662" /translation="MALAHTLGFPRIGRDRELKKAQEAFWKGELDEAGLRAVGRQLRA AHWQVQKDAGIQLLPVGDFAWYDQVLTHSLTFGVIPERFRAHGEAGPTLHTLFGMARG VSDDSCCGGAHAQEMTKWFDTNYHYLVPEFSADQQFQLSWEQLFEEVDEARALGHQVK PVLIGPLTYLWLGKAKGAEFDRLDLLDRLLPLYGQIFRRLAGQGVEWVQIDEPILVLD LPQAWKNAFERAYNLLQSEPLKKLVATYFGGLEDNLGLAANLPVDGLHIDLVRAPEQY PSILDRLPAYKVVSLGLVNGRNVWRCDLEKALEVVRHARERLGERLWVAPSCSLLHSP VDLEREDGLDAELKSWLAFAVQKCREVAVLARAATEPEAAEVLAALEESRAVQASRAS SPRIHKPAVQARLAAIKASDAQRRSPFAERIARQRAGLDLPAFPTTTIGSFPQTSSIR LARQSFKQGKLSEAEYIEAMHSEIRHAVQIQEQLGLDVLVHGEAERNDMVEYFAEQLD GYVFTRFGWVQSYGSRCVKPAVIYGDLSRPRAMTVEWIRYAQSLTDKVMKGMLTGPVT MLMWSFPREDVSREVQARQLALAIRDEVVDLEAAGIRIVQIDEAAFREGLPLRRNAWP HYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMEL LEAFEQFDYPNEIGPGVYDIHSPRVPSREEIVALLRKAARRIPAERLWVNPDCGLKTR AWPETEAALVNMVAAARELRGDLARG" misc_feature 2106580..2108874 /gene="metE" /locus_tag="PA1927" /note="5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional; Region: PRK05222" /db_xref="CDD:235367" gene complement(2108942..2109511) /gene="rimJ" /locus_tag="PA1928" /db_xref="GeneID:882063" CDS complement(2108942..2109511) /gene="rimJ" /locus_tag="PA1928" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribosomal protein alanine acetyltransferase" /protein_id="NP_250618.1" /db_xref="GeneID:882063" /translation="MPGNRRQVPILHRDADFLLRALQPDDFVRTSRYENANREHLAPW EPLRDPGYFSVDNARARTLLQVASMDEGEALLLLLLDPDDGEVLGRCSYTNIVRGVFQ ACHLGFSLAAAAQGRGLMARALRVANRYCFEQLGLHRIMASHLPRNARSERLLESLGF EKEGYARAYLKIAGVWEDHVLRALVDAPR" misc_feature complement(2108954..2109511) /gene="rimJ" /locus_tag="PA1928" /note="NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, from bacterial antibiotic resistance to circadian rhythms in mammals. Members...; Region: N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate; cl17182" /db_xref="CDD:473072" gene complement(2109558..2109854) /locus_tag="PA1929" /db_xref="GeneID:882042" CDS complement(2109558..2109854) /locus_tag="PA1929" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250619.1" /db_xref="GeneID:882042" /translation="MATDLYALAEQVEDEAGFLRFLAALAADWEEDRRLAAANPPKPF GPSPLGWENGSIGGFLDAAATWGEDSRDGLPGYSRPENAWRRAAQLMLAGKFYE" gene 2110226..2111521 /locus_tag="PA1930" /db_xref="GeneID:881912" CDS 2110226..2111521 /locus_tag="PA1930" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_250620.1" /db_xref="GeneID:881912" /translation="MLFGRKSRAVESAAKDEDLAWRLDAIGQNVATIRFTPDGQILSA NPLFLAVVGYSADELVGKHHRIFCEEDFQASAAYVRFWKELASGTPQRGVFKRLRRDG TPVWLEATYFPVKNAEGAVVEVLKIAADVTRNHSELLLLNAINDAIRQSMAVIEFTPD GEILDANENFLRLFGYSLKSLKGQHHRMLCFDEFYRENPDFWARLRHGEFSRGHFERR SAAGERVHIEATYNPVKDSSGRIIKVIKFAIDVTEQVNRNEEVRRAAELSFSTAEETA QISTRGIDSLDQSVALSAKTLSMVNTAVGLISQLTHQTKDIENIVTTIQSVAEQTNLL ALNAAIEAARAGDMGRGFAVVADEVRQLAARTSGATVEIKNVVTENVKLTQQINHNMQ TIESSAQENNNQITTVAGIMQEISKGAEHVARVVSSLFK" misc_feature 2110256..2111005 /locus_tag="PA1930" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature <2111000..2111509 /locus_tag="PA1930" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene 2111691..2112203 /locus_tag="PA1931" /db_xref="GeneID:879192" CDS 2111691..2112203 /locus_tag="PA1931" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ferredoxin" /protein_id="NP_250621.1" /db_xref="GeneID:879192" /translation="MTNPEPADLPISLLINGQRRELRVPPWLTLLDLLRERLDLVGSK KGCDHGQCGACTVLRNGRRINACLTLAVMCDGDALTTIEGLAEGDRLHPLQQAFIRHD AFQCGYCTPGQICSALGLASEGRARSRAEIREGMSGNLCRCGAYGNILDAVEDALPLL DRDGQGGQRA" misc_feature 2111718..2112158 /locus_tag="PA1931" /note="Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and conversion]; Region: CutS; COG2080" /db_xref="CDD:441683" gene 2112200..2113189 /locus_tag="PA1932" /db_xref="GeneID:878269" CDS 2112200..2113189 /locus_tag="PA1932" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydroxylase molybdopterin-containing subunit" /protein_id="NP_250622.1" /db_xref="GeneID:878269" /translation="MTPFAYAKPADIEQALGLAGPESRYIAGGTNLLDLMKENVARPR RLIDITGLPLRDIRRTPTGGLLVGALVSNAELAWNPAVEADYPLLAQAILAGASPQLR NMASTGGNLLQRTRCQYFYDTGTPCNKREPGSGCPARSGLNRNHAILGASEHCVAVHP SDLCVALAALEAQVLVRGRAGERRVAFADFHRLPADTPERDNCLAVDELVTAIELPAP RFARHCHYLKVRDRASYAFALVSVAAALEPDGERIGELRLALGGVAHKPWRVAELEER FRGHPANRDSYVRFAEALLRDARPLAHNAFKIGLARNAIVRALEEAHSGGIGQ" misc_feature 2112200..2113165 /locus_tag="PA1932" /note="Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit [Energy production and conversion]; Region: CutB; COG1319" /db_xref="CDD:440930" gene 2113186..2115390 /locus_tag="PA1933" /db_xref="GeneID:877845" CDS 2113186..2115390 /locus_tag="PA1933" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydroxylase large subunit" /protein_id="NP_250623.1" /db_xref="GeneID:877845" /translation="MSSLPHSTGQALDRVDGPAKVTGQARYAAEYPAADLLHGSVVSS DVARGRVRGIDCAAALAVPGVVAVLHHLNRPPMAGDDEPYKDADAAEGEPFRPLFDDR VLYSGQPLALVLARSLELARYAGSLLRIDIEPEPHQTDLLAALDQAHEAPAQLPAERG DFYTAYGAAPIRVEASYSTPIEHHNPMEPHASTVIVQPDGSLLVHDKTQGTQNSQAYL QKVFGLPADKVRVCAAYVGGAFGSGLRPQYQLALAVMAALQLRRSVRVVLTRQQMFTF GYRPRTLQRLQLGADAEGRLLALGHQATAQTSRFEDFTEHVVEWSGMLYRCENFSLAY RLVPLDVYTPLDMRAPGAALGLIGLECAMDELAVRLGMDPIALRRFNFAERNGNEDKP YSSKALLACYEEGARRFGWQARDPRPRSMSEGRQLLGWGMAGGVWEAMQSKASARARL EADGLLRVASATTDIGTGTYTVMTQIAADAAGMAPEEVRFQLGDSALPKAPLQGGSFT VSSVGSAVRLACLRLRQALVAHARARHPELAGTAEERFRICRGHLEAGDTRYALADLL QGLPEDALQVEVEAEPSARRKGYATATHSAVFVEVRIDEALGTLRVSRVVSAVAAGRV INPKTARSQILGGVVWGLGMALQEETQVDHALGRCMNHNLAEYHIPVNADIGDIEVIF VDEPDDIVNELGSKGVGEIGIVGVAAAVANAVYHATGRRLRDFPLTVDKLLG" misc_feature 2113210..2115384 /locus_tag="PA1933" /note="Aldehyde, CO or xanthine dehydrogenase, Mo-binding subunit [Energy production and conversion]; Region: CoxL; COG1529" /db_xref="CDD:441138" gene 2115885..2116265 /locus_tag="PA1934" /db_xref="GeneID:879221" CDS 2115885..2116265 /locus_tag="PA1934" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250624.1" /db_xref="GeneID:879221" /translation="MKNAMALTLAGLLAAPSLGFAAAPDAVMVFARQGDKGSVSVGDK HFRTQAFKVRLVNAAKSEISLKNSCLVAQSAAGQSFRLDTVDEELTADTLKPGASVEG DAIFASEDDAVYGASLVRLSDRCK" misc_feature 2115930..2116253 /locus_tag="PA1934" /note="Domain of unknown function (DUF4354); Region: DUF4354; pfam14263" /db_xref="CDD:433820" gene 2118585..2118893 /locus_tag="PA1937" /db_xref="GeneID:883096" CDS 2118585..2118893 /locus_tag="PA1937" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250627.1" /db_xref="GeneID:883096" /translation="MSKQRRTFSAEFKREAAALVLDQGYSYIDACRSLGGVDSALRRW VKQLEAERQGVTPKSKALTPEQQKIQELEARINRLEREKAILKKATALLMSDELDRTR " misc_feature 2118585..2118863 /locus_tag="PA1937" /note="Transposase InsE and inactivated derivatives [Mobilome: prophages, transposons]; Region: InsE; COG2963" /db_xref="CDD:442203" gene 2118926..2119747 /locus_tag="PA1938" /db_xref="GeneID:879740" CDS 2118926..2119747 /locus_tag="PA1938" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250628.1" /db_xref="GeneID:879740" /translation="MVCSAFDVARSCYYVHRLRRRRVDARRVALRSQVNQLFSQSRGS AGSRSILGMLREEGVTIGRFRVRRLMRELGLVSKQPGSHAYKQATVERPDIPNRLNRE FATEHPNQVWCGDITYVWAQGRWHYLAAVLDLHTRRVIGWAFSAKPDAELVIKALDMA YEQRGKPQQVLFHSDQGSQYASRLFRQRLWRYRMQQSMSRRGNCWDNSAMERLFRSLK SEWVPSTGYLTAQEAQRDISHYLMHRYNWIRPHQFNDGLPPAVAEEKLNPLSGMG" misc_feature <2118926..2119714 /locus_tag="PA1938" /note="IS3 family transposase; Region: transpos_IS3; NF033516" /db_xref="CDD:468052" gene complement(2120225..2122222) /locus_tag="PA1939" /db_xref="GeneID:877670" CDS complement(2120225..2122222) /locus_tag="PA1939" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250629.1" /db_xref="GeneID:877670" /translation="MLALRIFLLSPTRLNLRDVTIANWTKIDLLGSEWEAGAEPTVDL DSLLPSLDVWLDVPLREIQHVVDILPTLDWSGGLLGVRLAFRIKNLDKLKSEYIAQRT AARDAAIVGPNGESIKIAVWPRNLTDFLERRLRAHLELLAYPLDPAAVVPPGRSGLAT PQRLPASALAFEHPPFKKLIKIDEIAAQRDFADASSSDGGEDKGEANNRRFKRRLSDQ LRSYYDRHLDPTKTPSDKDYEALGAIQAAERSFDARLEEGFSAAFQELEDLGYPGMSN PKLKISTLLRGTDGLKHGSSVQYQVADPSGDGSNTLQLPEDYSGLGYQNLIAMVFMLM GFRDEWMRVEKAGILEGADVSHEIQPLHLVLVEEPEAHLHAQVQQVFINKAYTLLRKH ADLGVAENYCTQLIVSTHSSHVAHEADFANLRYFRRRPAASMGETPTTTVANLSYIFG DGDETKRFVKRYLKATHCDLFFADGVIFVEGQAERILVPHFIRHHFPELSRRYVTLLE LGGSHVHSFRNLVDALGIATLIIGDLDATTAVKIIDKNMRETTRWKSARPEQGKAQQT ANSVLKDWHPGKKLIDELVALPPDGHISTAGGDYELYVAYQKPVNVKGASEDSDLIIP RTFEDALILENLAVAGKIEGSITSAKVRGIVAQDLSGDEGR" misc_feature complement(2120588..>2121595) /locus_tag="PA1939" /note="Predicted ATP-dependent endonuclease of the OLD family, contains P-loop ATPase and TOPRIM domains [Replication, recombination and repair]; Region: YbjD; COG3593" /db_xref="CDD:442812" gene complement(2122579..2123718) /locus_tag="PA1940" /db_xref="GeneID:879429" CDS complement(2122579..2123718) /locus_tag="PA1940" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250630.1" /db_xref="GeneID:879429" /translation="MRAPLTHAWLFLGKWLGRLLLLLLAVGLGGWAIGSLYYAWKFSG PVSAEEQIAPDEARITQAIIQDAIRVVEQHRDNTRVLRDAHAKAHGCVKAEFKVRADL DPTLRRGVFAEPGKSWNAWVRFSNGNAYPQFDSKNDARGMAIKLLDVPGEKLLPGRGH DGEQDFVMFNQPVFFIRDIAEYRQNFAAQADGKKALAFFPNWNPASWELRHLLIALRT LAPAPDSPLHAGYNGISPYKLGEHNIKFRVVPAPEKCPAYQLPKQNQDLPNFLRAALY QQLSIDRTPACYAFQVQRQDPAKYMPIEDTSVEWKESDAPFATIADIIVPAQDFDSRE QNLFCDNLSFNPWHALPEHRPIGGINRLRKAVYEAVSGYRLGRNG" misc_feature complement(2122591..2123484) /locus_tag="PA1940" /note="Catalase-like heme-binding proteins similar to the uncharacterized y4iL; Region: y4iL_like; cd08152" /db_xref="CDD:163708" misc_feature complement(order(2122618..2122620,2122630..2122632, 2123197..2123199,2123212..2123214,2123344..2123346, 2123464..2123466)) /locus_tag="PA1940" /note="putative heme binding pocket [chemical binding]; other site" /db_xref="CDD:163708" protein_bind complement(2122761..2122773) /locus_tag="PA1940" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1939" /bound_moiety="AmrZ" gene complement(2123897..2125792) /locus_tag="PA1941" /db_xref="GeneID:881869" CDS complement(2123897..2125792) /locus_tag="PA1941" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250631.1" /db_xref="GeneID:881869" /translation="MRTVKKALLVVGVIVLAVVGVVVYYVANPNLPHYQAPSEVRYLP QWQDEARQRFYYTPQGTLVKGLHYDWFTALELPFSEEPFAAPEYLARFGFLVDPQQKA SDLNPGNLPVGFSQHRDEKTGTRYLDITCAACHTGELRYQGKSLRIDGGAAMHSIAAT VPTLRGGAFGQALGASMAATYYNPFKFNRFARKVLGERYEQDKSQLRADFKAVLDTLL RTAWNDTRRHLYPTEEGPGRTDAFGRIANSVFGDAIDPSNYRVANAPVSYPQVWDIWK FDWVQWNGSAMQPMARNIGEALGVGARLQIFDEHGQPLRGEQRYASSVRLHDLHALEE TLQQLKPPTWPEDLFGRIDLQRASQGRALFEANCAFCHAPKVQPAEYAAPGRNPEWRM HMVPTEVIGTDPTTADNIADHRYDLRKLGWSVDELARMNVQLIGADPQQLDLSQLSSA KGLAYITAFVEQRAYRDAGIPPEQQKTMNGFDLPIGVQELRAYKARPLDGVWATPPFL HNGSVPNLFQLLSPAAERSPQFYVGTFEFDPKFVGFRTEKFPGGFLLDTRLTGNRNSG HEFRDGCRQNGVIGRALSPEERWALVEYLKVLGNPEFERRLVPAQTPPWTPGPKCPAP EQRTAQR" misc_feature complement(2124002..2125657) /locus_tag="PA1941" /note="di-heme-cytochrome C peroxidase; Region: CytoC_perox; NF040606" /db_xref="CDD:468579" protein_bind complement(2125838..2125850) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1941" /bound_moiety="AmrZ" protein_bind complement(2125846..2125858) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1941" /bound_moiety="AmrZ" protein_bind 2125852..2125864 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA1941" /bound_moiety="AmrZ" gene complement(2126104..2126334) /locus_tag="PA1942" /db_xref="GeneID:881774" CDS complement(2126104..2126334) /locus_tag="PA1942" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250632.1" /db_xref="GeneID:881774" /translation="MASETIHFSFANADVYIVARSPNNQNGTGDDTMSYSAKSFSALI NAMRADGITRLEQLARQPFRNAQGFWSAEVKK" gene complement(2126396..2127493) /locus_tag="PA1943" /db_xref="GeneID:880691" CDS complement(2126396..2127493) /locus_tag="PA1943" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250633.1" /db_xref="GeneID:880691" /translation="MNLTLRPAGVDDLSALVELENRCFDYDRLSRRNFQWMLTRAHAS LTVAEGDGGVLGYALVLFHEGTSLARLYSIAIDPRARGIGLGQKLLEAAEQAARDNDR AYMRLEVRPDNRGAIALYERNGYRPFATVRDYYEDHSEALRFEKRIRNPGHDQRRHVP FYRQTTDFTCGPACLLMAMGALQPERQLTRREELRLWREATTIYMTAGHGGCSPQGLA LAAWRRGFRVKLVLSAGGPLFLDGVRNEDKKAVMRLVHEDFCEELDASGVEQKRSARL DIPRQLARGGQPLVLISSYRLTRSKAPHWVLVTHYDEDFVYLHDPDVDHSQHRQPLDC QHIPVSHAEFDKMSRFGRSKLRAAVILFNPE" misc_feature complement(2127203..>2127478) /locus_tag="PA1943" /note="amino-acid N-acetyltransferase; Region: PLN02825" /db_xref="CDD:215441" misc_feature complement(2127047..2127328) /locus_tag="PA1943" /note="Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]; Region: RimI; COG0456" /db_xref="CDD:440224" misc_feature complement(2126408..2127019) /locus_tag="PA1943" /note="Peptidase_C39 like family; Region: DUF3335; pfam11814" /db_xref="CDD:432095" gene 2127684..2129171 /locus_tag="PA1944" /db_xref="GeneID:879995" CDS 2127684..2129171 /locus_tag="PA1944" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250634.1" /db_xref="GeneID:879995" /translation="MSKLFIIVERKEDWTSYYPSEDVVTAQEYLELPIDDDTGKRVQV INLCRHYKYLRHGYYCSLLAEARGHKVIPSVRTISELARKSLYSLVLEDLDRTLDKAL AAHPYGSTDGFTLTLYFGRTDIEPLQDLARQLFEAFPCPLLLVEFKRNRTWHIEGIKP GAIHKLREDQEDLFANALDSFSRQIWRKPRSRKPFRYDLAILHDPGEAFPPSDAKALK NFVRVGRSLGIDVDLIERKDYSRIAEYDALFIRETTNVADHTYRFAKKAESEGLVVMD DPVSILRCTNKVYLADLLRSHKLGMPATEILYKENPQELEKVGERLGFPLVLKIPDGS FSRGVIKVEDQEQLLAASAELFERSVLILAQEFFYTEYDWRIGVLNRKPIFACQYFMS KGHWQIYDHSPDAEEVSGDFRTMPVHEAPRKVVELAVKTANLIGDGLYGVDLKQAGDK VVVIEVNDNPNIDCGVEDVYLGDDLYKLVLEEFVRRLEVKRRGYD" misc_feature 2127759..2128214 /locus_tag="PA1944" /note="RimK-like ATPgrasp N-terminal domain; Region: RLAN; pfam14401" /db_xref="CDD:433935" misc_feature 2128272..2129144 /locus_tag="PA1944" /note="Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily [Amino acid transport and metabolism, Coenzyme transport and metabolism, Translation, ribosomal structure and biogenesis, Secondary metabolites biosynthesis, transport and catabolism]; Region: LysX; COG0189" /db_xref="CDD:439959" gene 2129307..2130635 /locus_tag="PA1945" /db_xref="GeneID:878926" CDS 2129307..2130635 /locus_tag="PA1945" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250635.1" /db_xref="GeneID:878926" /translation="MPDASNLRRLLVVDPCDDCRRLLPGLREAGWAVDSCALETARER ACDVGLLRLRPFHLERPETVKDLISRSGTEWIAVLSPDTLPLNGVGDFVCEWFFDFHT LPFDMARVQVTLGRAFGMARLRGRGTVPGDAEGEHELLGESLAVRDLRRLLAKLAPTD SPVLIRGESGTGKELVARTLHRQSRRVDKPFVAINCGAIPEHLIQSELFGHEKGAFTG AHQRKVGRIEAADGGTLFLDEIGDLPLELQANLLRFLQEQQIERVGGNRPVEVDVRVL AATHVDLEAAIDAGTFREDLYYRLNVLQVGTAPLRERSEDLPLLANHFSRLYSLETGR RPRRFSEDALAAMAMHAWPGNVRELANRVRRGLVLAEGRQIEAQDLGLECARGDGPPL SSLEVYKLCAERQAMCDALARYGDNLSVAARMLGVSRPTFYRLLHKHRLR" misc_feature 2129316..2129651 /locus_tag="PA1945" /note="VpsR domain; Region: VpsR; pfam20161" /db_xref="CDD:437993" misc_feature <2129715..2130632 /locus_tag="PA1945" /note="RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:443041" gene 2130854..2131813 /gene="rbsB" /locus_tag="PA1946" /db_xref="GeneID:878276" CDS 2130854..2131813 /gene="rbsB" /locus_tag="PA1946" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribose ABC transporter substrate-binding protein" /protein_id="NP_250636.1" /db_xref="GeneID:878276" /translation="MKRVASRRLLAAVVLTACSSFLPLSAVHAETPEKPRIALVMKSL ANEFFLTMEDGAKAYQKEHADRFELVSNGIKDETDTSSQIRIVEQMIVSGVDALVIAP ADSKALVPVVKKALDAGIVVVNIDNRFDPQVLQAKKIGVPFVGPDNRKGARLVGEYLA KRLKVGDEVGIIEGVSTTTNAQQRTAGFKDAMDAAGMKIVSLQSGNWEIEKGNAVASA MLNEHPDLKALLAGNDSMALGAVSAVRAAGRAGQVKVVGYDNIQAIKPMLKDGRVLAT ADQFAAKQAVFGIQTALKLLAGQTPEHEKDGVVETPVELVTAP" misc_feature 2130959..2131798 /gene="rbsB" /locus_tag="PA1946" /note="monosaccharide ABC transporter substrate-binding protein; Region: PBP1_ABC_sugar_binding-like; cd19970" /db_xref="CDD:380625" misc_feature order(2130977..2130979,2130989..2130991,2130995..2131000, 2131229..2131231,2131391..2131393,2131403..2131405, 2131472..2131474,2131550..2131552,2131625..2131630, 2131688..2131690) /gene="rbsB" /locus_tag="PA1946" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:380625" protein_bind complement(2131660..2131672) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 2131835..2133367 /gene="rbsA" /locus_tag="PA1947" /db_xref="GeneID:880680" CDS 2131835..2133367 /gene="rbsA" /locus_tag="PA1947" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribose transporter RbsA" /protein_id="NP_250637.1" /db_xref="GeneID:880680" /translation="MSSDALPLLSIRGVGKTYAQPVLAEIDLQLFGGEVLALTGENGA GKSTLSKIVGGLERPGAGSLELLGRPYAPASRREAEALGVRMVMQELNLLPTLSVAEN LFLHDLPRRAGWIDRRRLRAAAREAMAQVGLEAIDPDTLVGDLGIGHQQMVEIARNLI GDCRLLILDEPTAMLTAREVDMLFEQVERLRERGVAIVYISHRLEELARISQRIAVLR DGRLVCVEPIERYDADQLVTLMVGRDLGERFDLGPRQTGAPLLRVERLSRRGKVHEVS FEVRAGEIFGISGLIGSGRTELLRLIYGADRADGGQVLLGDPPQRLSLRSPADSVRQG VALITEDRKGEGLLLDQSISANLALGNLPALARHGVIDRRREEALARRQVEALRVRCA DTAQAVGELSGGNQQKVVIGRWLERDCQVLLFDEPTRGIDVGAKFDIYALLAELTRRG KALVVVSSDLRELMLICDRIGVLSAGRMVDTFERDAWTQDALLAAAFAGYKKRDALLA TS" misc_feature 2131853..2133331 /gene="rbsA" /locus_tag="PA1947" /note="ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]; Region: MglA; COG1129" /db_xref="CDD:440745" gene 2133391..2134389 /gene="rbsC" /locus_tag="PA1948" /db_xref="GeneID:880795" CDS 2133391..2134389 /gene="rbsC" /locus_tag="PA1948" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribose ABC transporter permease" /protein_id="NP_250638.1" /db_xref="GeneID:880795" /translation="MSDPTSSATAAAAPTLRRGNYFGLGTYLGLAGALLAMIALFSAL SSHFLSYGTFLAIANQIPDLVVLAVGMTFILIVGGIDLSVGSVLALAASAVSLATLGW GWGVLPAAMLGMACATLAGCVTGSITVAWRIPSFIVSLGVLEMARGLAYQMTDSRTAY IGDAYAWLSNPLAFGISPAFVIALLVMFAAQAVLTRTVFGRYLIGIGTNEEAVRLAGV NPKPYKIAVFALMGLLAGLAALFQISRLEAADPNAGVGLELQVIAAVVIGGTSLMGGR GSVVSTFFGVLIISVLAAGLAQIGASEPTKRIITGAVIVVAVVLDTYRSHRARRQG" misc_feature 2133472..2134380 /gene="rbsC" /locus_tag="PA1948" /note="Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component [Carbohydrate transport and metabolism]; Region: AraH; COG1172" /db_xref="CDD:440785" gene 2134393..2135406 /gene="rbsR" /locus_tag="PA1949" /db_xref="GeneID:877981" CDS 2134393..2135406 /gene="rbsR" /locus_tag="PA1949" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribose operon repressor RbsR" /protein_id="NP_250639.1" /db_xref="GeneID:877981" /translation="MATMKDVAAMAGVSFTTVSHVVNRTRPVSDAVRKKVEDAIAQLH YVPSAVARSLKVRTTSIIGLLVPNSTNPYFAELSRGIEDCCERNGYCVILCNSDDNPQ KQANYLRVLQEKRIDGLVLASAGGDGALAKGLANMRTPTVIVDREVEGVEADRVQIDH EMGAYLATRHLLELGHRDIACIGGPLSTKVSTLRVEGYRRAMAKAGLEVRPQWLLESE FSSPGGYHAALGLLGGEGERPTAIVAGNDMIGIGVLRAAAELNIRVPHELSVIGFDDI ELSRFVFPALTTVGQSIRLLGEIAAQLLLQRIAEREEPMQRRVVAPALVLRESTAPPL VRV" misc_feature 2134393..2135391 /gene="rbsR" /locus_tag="PA1949" /note="DNA-binding transcriptional regulator, LacI/PurR family [Transcription]; Region: PurR; COG1609" /db_xref="CDD:441217" gene 2135460..2136386 /gene="rbsK" /locus_tag="PA1950" /db_xref="GeneID:880829" CDS 2135460..2136386 /gene="rbsK" /locus_tag="PA1950" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribokinase" /protein_id="NP_250640.1" /db_xref="GeneID:880829" /translation="MQAKVLVVGSLNMDLVVRAPRLPRGGETLAGQSFITVPGGKGAN QAVAAARLGAEVAMIGCLGDDAYGDQLYRALQAEGIDCQGVERVAGESSGVALIVVDD SSQNAIVIVAGGNGHLSPAVLARHEHLLEQAQVVVCQLESPLETVGHVLRRAHALGKT VILNPAPATRDVPAEWLPLVDYLVPNETESELLCRLPVDSLESAGRAAERLREMGAGR VIVTLGAQGALLVGEGRVEHFPVARVKALDTTAAGDTFVGGFAAALARGLDEAAAIRF GQAAAAISVTRLGAQTSIPSREEVERALVGEA" misc_feature 2135484..2136362 /gene="rbsK" /locus_tag="PA1950" /note="ribokinase; Region: D_ribokin_bact; TIGR02152" /db_xref="CDD:274000" misc_feature order(2135493..2135495,2135499..2135501,2135574..2135582, 2135589..2135591,2135745..2135747,2135751..2135753, 2135781..2135783,2135787..2135789,2135880..2135882, 2136207..2136212,2136219..2136221,2136327..2136329) /gene="rbsK" /locus_tag="PA1950" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238579" misc_feature order(2135502..2135504,2135508..2135510,2135523..2135543, 2135580..2135582,2135742..2135744,2135748..2135756, 2135772..2135795,2135958..2135960) /gene="rbsK" /locus_tag="PA1950" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238579" misc_feature order(2136015..2136017,2136123..2136131,2136138..2136140, 2136177..2136179,2136195..2136197,2136204..2136206, 2136213..2136218,2136225..2136227,2136291..2136293, 2136300..2136305,2136312..2136314) /gene="rbsK" /locus_tag="PA1950" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:238579" gene complement(2136520..2137785) /locus_tag="PA1951" /db_xref="GeneID:880745" CDS complement(2136520..2137785) /locus_tag="PA1951" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250641.1" /db_xref="GeneID:880745" /translation="MTQTLSLRAVLCATTLVSPFLAQAATESEVEALKKELLELRQRY EAQQNALMVLEQRVRQVEAQPQAPQPQRLVKSIQPPAQARNDANAVAGTYGASLKDDG APAPSVENIYQDASGFFGGGTFSLETGLTYSHYDTRQLFLNGFLALDSIFLGNIGVDQ IDADIWTLDLTGRYNWNQRWQVDINAPVVYRESTYQSAGAGGSTSQITEKSVTGDPRL GDVSFGVAYKFLDESESTPDAVVSLRVKAPTGKDPYGIKLKQVPGNNNLNVPDDLPTG NGVWSITPGISLVKTVDPAVLFGSLSYTYNFEESFDDINPQQGVKTGGKVKLGNWFQL GVGVAFALNEKMSMSFSFSELISQKSKVKQDGQSWQTVSGSDANAGYFGLGMTYAVSN RFSIVPSLSIGITPDAPDFTFGVKFPYYF" misc_feature complement(2137600..>2137722) /locus_tag="PA1951" /note="leucine zipper found in the TSC22 domain leucine zipper transcription factors, c-Myc-binding protein, and similar proteins; Region: ZIP_TSC22D-like; cl40461" /db_xref="CDD:424092" misc_feature complement(order(2137600..2137605,2137612..2137617, 2137621..2137626,2137639..2137644,2137654..2137659, 2137663..2137668,2137672..2137689,2137693..2137698, 2137708..2137710)) /locus_tag="PA1951" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:409277" misc_feature complement(2136535..2137326) /locus_tag="PA1951" /note="Putative MetA-pathway of phenol degradation; Region: Phenol_MetA_deg; pfam13557" /db_xref="CDD:463920" protein_bind complement(2137802..2137814) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(2137813..2137825) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(2137846..2138598) /locus_tag="PA1952" /db_xref="GeneID:880731" CDS complement(2137846..2138598) /locus_tag="PA1952" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250642.1" /db_xref="GeneID:880731" /translation="MLREHAMYTHHCFVLACCLGAALPAPASDLFAPAELSDQELSQL RGRYVLPGRIVSFGVTMSSTWQNASGQVLGARVDLQVRQNLARPVLNVTLVDRPGDAP PPVAGNGQVLGGAGLAQTQGVSQSIRTAGDHNSASNGVSIEVRHGEAPPPLSGGTPLE GALALSGETGTVKVTPNGGALQLAIQASGQGASLQSLGAGGLVQSVALSGNRNLVQNL AALEVMLKDRPGADPALNCAWEQLRALRPSGY" gene complement(2138612..2139292) /locus_tag="PA1953" /db_xref="GeneID:880801" CDS complement(2138612..2139292) /locus_tag="PA1953" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250643.1" /db_xref="GeneID:880801" /translation="MRTLILSLLLLVDLTTQAATLGFPALPGGGLVYKQVQSIRERRF ADLVEQKTDFSCGAAALATILEKAYGAPLDEQAVIQGMLAHADPEIVRTQGFSMLDMK RYVESMGMRARGYRIEAAQLEQLKIPAIVLMEIRGYKHFVVLQRTQGEYVYVGDPALG HKRYALTEFAKGWNGIVFAVIGQGYDRGNPLLTPPEPLTARNRLDRFKPVRDAELMEF GFIQSDFF" misc_feature complement(2138750..2139241) /locus_tag="PA1953" /note="Predicted double-glycine leader peptidase, C39-like (CLD) domain [Intracellular trafficking, secretion, and vesicular transport]; Region: C39G; COG3271" /db_xref="CDD:442502" gene complement(2139354..2140376) /locus_tag="PA1954" /db_xref="GeneID:880832" CDS complement(2139354..2140376) /locus_tag="PA1954" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250644.1" /db_xref="GeneID:880832" /translation="MKATMVLTPLALAMAAVLSVSAYAGNEGGWHPPKPNPQSNNKGG ATALVVDTQQNYNNKVSNFGTLNNASVSGSIKDASGNVGVNVAAGDNNQQANAAALAS ADASFVFGTATASTSVLQSGYGNTLNNYSNPNTASLSNSANNVSGNLGVNVAAGNFNQ QKNDLAAAVSNGQYSTAGSAASQTSTGNTTVNSANYAYGGTYVSLKLNADGSYKGTSD QIGDVYLDTWEGQTHPGGSNTGHIDVDSQAQGAKDLNHDGGAFAFKEKGDVDLKGTVS GFIPAIVGFKTPVTNNASLSNSLQNVSGNVGVNIAAGGGNQQSNSLSIAAGCSSCPAG GESLGF" gene complement(2140433..2141002) /locus_tag="PA1955" /db_xref="GeneID:880634" CDS complement(2140433..2141002) /locus_tag="PA1955" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250645.1" /db_xref="GeneID:880634" /translation="MKRLSALLLAFACIASLQADPLASRNRASIDDSGTYRGNFALNQ AAGDAQQQSNVRVVAVGSAALVGSDQRQHLQLDASQPIAASASISGAALRGSGILGVN QGAGLGNQQINAFRLSLSNGPESLDDSVLAQSVALTKVSGSATPVPGGRSVSTDDRAF AGSSGVVQVNQSAGVGNQSMNTLSVRVME" gene complement(2140999..2141487) /locus_tag="PA1956" /db_xref="GeneID:880791" CDS complement(2140999..2141487) /locus_tag="PA1956" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250646.1" /db_xref="GeneID:880791" /translation="MSGSSLRIVVPALLVIVGSVPVSLPAHAADGTIVVQRQVQPRVA YRPSMVPDPHPTVVDTNVSAEVNALANGAASGNTVSRELGDADFAIVTSGSGIRSMIL TGSALPGFASQPANPATVQAVGNLGTTHGAGGGAGAGLAGQINGSLKQGLAPLQMLGG GQ" gene complement(2141790..2142317) /locus_tag="PA1957" /db_xref="GeneID:879739" CDS complement(2141790..2142317) /locus_tag="PA1957" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250647.1" /db_xref="GeneID:879739" /translation="MKVLVLTGPESSGKSWLAEQLQARFGGRVVGEYVRHFIDEQRRD TCYADIPAIARGQLAWEDAARAERPALLILDTHLLSNILWSRILFGDCPDWLEPALLR RRYDLHLLLSPEGVAWSADGQRCQPELAQRQAFHRECQAWLERHRQPYRAIAGDWAER RRQAFAAVQGLLQDG" misc_feature complement(2141796..2142317) /locus_tag="PA1957" /note="Nicotinamide riboside kinase [Coenzyme transport and metabolism]; Region: NadR3; COG3172" /db_xref="CDD:442405" gene complement(2142314..2142889) /locus_tag="PA1958" /db_xref="GeneID:880769" CDS complement(2142314..2142889) /locus_tag="PA1958" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_250648.1" /db_xref="GeneID:880769" /translation="MSPLELFAASLGAIAVYLTVRQNPWCWPIGLVMVALYAWIFFEV KLYSDMLLQMVYAALQLYGWWQWTRGGQDHDGRSVSRLNAAQRLYGLGAGLVGSVALG YLMANHTDAASPWWDAGLTAFSLVAQCWMAQKRLECWALWIAVDVLFVALFASKALYL TAALYALFTLLAIHGWRTWRRDPALREGVAA" misc_feature complement(2142344..2142889) /locus_tag="PA1958" /note="Nicotinamide riboside transporter PnuC [Coenzyme transport and metabolism]; Region: PnuC; COG3201" /db_xref="CDD:442434" gene 2143173..2144006 /gene="bacA" /locus_tag="PA1959" /db_xref="GeneID:877690" CDS 2143173..2144006 /gene="bacA" /locus_tag="PA1959" /EC_number="3.6.1.27" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="undecaprenyl-diphosphatase" /protein_id="NP_250649.1" /db_xref="GeneID:877690" /translation="MEWWTAFQAFILGVVEGLTEFLPISSTGHQIIVADLIGFGGERA KAFNIIIQLAAILAVVWEFRGKIFQVVRDLPSQRQAQRFTANLLIAFFPAVVLGVLFA DLIHEWLFNPITVALALVVGGVVMLWAERRKHVIRAEHVDDMTWKDALKIGCAQCLAM IPGTSRSGATIIGGLLFGLSRKAATEFSFFLAMPTMVGAAVYSGYVYRDLFRPEDLPV FAVGFVTSFVFAMLAVRALLKFIGNHSYAAFAWYRIAFGLLILATWQFHLIDWSTAGE V" misc_feature 2143176..2143970 /gene="bacA" /locus_tag="PA1959" /note="undecaprenyl-diphosphate phosphatase; Region: PRK00281" /db_xref="CDD:234712" gene 2144077..2144799 /locus_tag="PA1960" /db_xref="GeneID:878582" CDS 2144077..2144799 /locus_tag="PA1960" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250650.1" /db_xref="GeneID:878582" /translation="MQRETGSERVDVDMEKPGMISRWYDDKGFGFILPKTGGEEVFLH ISAFRGDRRPRQGDQVWFLASQDAQGRLRAERARLDALTIDPPTVRRGAQAPVTRAQA RPAPTPPSALQRPLAKLLVLLILCVLPAAGAWRMYLDGQALWPLLAYPLASLLAFALY WRDKRSAARGDWRTPEVRLHLFELLGGWPGALVAQQVFRHKTRKLSFQLVFWGIVLLH QLFWLDSLLGGRLSAALLQWIG" misc_feature 2144128..2144313 /locus_tag="PA1960" /note="Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein; Region: CSP_CDS; cd04458" /db_xref="CDD:239905" misc_feature order(2144140..2144142,2144167..2144169,2144200..2144202, 2144284..2144286) /locus_tag="PA1960" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:239905" misc_feature order(2144158..2144178,2144197..2144208) /locus_tag="PA1960" /note="RNA-binding motif [active]" /db_xref="CDD:239905" misc_feature 2144500..2144745 /locus_tag="PA1960" /note="Uncharacterized membrane protein YsdA, DUF1294 family [Function unknown]; Region: YsdA; COG3326" /db_xref="CDD:442555" gene complement(2144810..2145745) /locus_tag="PA1961" /db_xref="GeneID:880728" CDS complement(2144810..2145745) /locus_tag="PA1961" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250651.1" /db_xref="GeneID:880728" /translation="MPHDLNDLYYFAKVVECGGFAAAGRETGIPKSRLSRRIAELEER LQVRLLHRTTRKLALTEVGERYLQHCRNLLLEAEMADQVIAELSVEPRGRLRLSAPVA MASSNLADLLPRFLERHPQVQLEILLTNRRVDLLNEGVDVALRVRELGDEDPALVCRR LAPATTQILAAPSLIAGRRLEHPEDLEDLPFLGAIHNDRKVHATLIGPDGSRYQLERE PRLGVDDFVLRKKAAVAGLGVTLLPEGYCDRELADGSLVRILPQWTLPKSTMQAAYLP RSSQIPAIRALIDFLVEALQRPSGETGPAYRRARE" misc_feature complement(2144855..2145736) /locus_tag="PA1961" /note="LysR family transcriptional regulator; Provisional; Region: PRK14997" /db_xref="CDD:184959" gene 2145894..2146502 /gene="azoR2" /locus_tag="PA1962" /db_xref="GeneID:877936" CDS 2145894..2146502 /gene="azoR2" /locus_tag="PA1962" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="FMN-dependent NADH-azoreductase" /protein_id="NP_250652.1" /db_xref="GeneID:877936" /translation="MKLLHIDSSILGDASASRQLSAELVQAWRQNEDGLDVTYRDLAA DAVAHFSALTLAAGSTPAELRDAALKHEVAVGEEVLEEFLAADVVVIGAPMYNFTISS QLKAWIDRIAVAGKTFRYTENGPVGLAGDKKVVIVSTAGGVHAGQPTGAAHEGYLRTV LGFFGITDIEVVRAEGLAYGEEPRTQAIAAARRQIAGQFAAA" misc_feature 2145894..2146448 /gene="azoR2" /locus_tag="PA1962" /note="azoreductase; Reviewed; Region: PRK00170" /db_xref="CDD:234675" gene 2146609..2146875 /locus_tag="PA1963" /db_xref="GeneID:882041" CDS 2146609..2146875 /locus_tag="PA1963" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250653.1" /db_xref="GeneID:882041" /translation="MSACYCRNCGARATRLVENGICEACKRRSDINPKNVLIAAALIV YIGVNVAAYIKDHPPRELTAEQREKIAEGQRLATRAAMMAGYVD" gene complement(2146961..2148526) /locus_tag="PA1964" /db_xref="GeneID:880663" CDS complement(2146961..2148526) /locus_tag="PA1964" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC-F family ATPase" /protein_id="NP_250654.1" /db_xref="GeneID:880663" /translation="MQFGAKPLFENVSVKFGNGNRYGLIGANGCGKSTFMKILGNDLE PSAGQVMLEPNVRLGKLRQDQFAYEDFSVIDTVIMGHEELWAVKAERDRIYSLPEMSE ADGMAVAELEVQFAEFDGYTAESRAGELLLGLGIPLEQHFGPMSAVAPGWKLRVLLAQ ALFSDPDVLLLDEPTNHLDINTIRWLEGVLTARNSTMIIISHDRHFLNSVCTHMADLD YGELRLFPGNYDEYMTAAEQARERLLSDNAKKKAQIAELQSFVSRFSANASKAKQATS RARQIDKIQLEEVKPSSRVSPFIRFEQYKKLHRQAVTVENISKGYDGKPLFKGLSLQV EAGERVAIIGPNGIGKTTLLRCLVGDLPVDGGEVKWTDSADVGYFAQDHADDFADDMS LFDWMAQWTQGGEQLVRGTLGRMLFSNDEIKKSVKVISGGEQGRMLFGRLILKRPNVL VMDEPTNHLDMESIEALNLALDNYPGTLIFVSHDREFVSSLATRIIELGENGVTDFSG SYDDYLRSQGVIV" misc_feature complement(2146970..2148526) /locus_tag="PA1964" /note="ABC transporter ATP-binding protein; Provisional; Region: PRK15064" /db_xref="CDD:237894" gene 2148854..2149189 /locus_tag="PA1965" /db_xref="GeneID:882148" CDS 2148854..2149189 /locus_tag="PA1965" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250655.1" /db_xref="GeneID:882148" /translation="MKPAVLPALLVLSLLGGCGDSSTDGKAASGPLALHCGDFGKLEV IDGFASLKLPDGSSVQSLGGDVRSLADGQALSAISYSDGSVLYRQAGDTPGYLYTPAK GQRQACETR" gene 2149472..2149843 /locus_tag="PA1966" /db_xref="GeneID:877672" CDS 2149472..2149843 /locus_tag="PA1966" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250656.1" /db_xref="GeneID:877672" /translation="MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRF VTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQV SVEVREMERASYAKRVVARQR" misc_feature 2149475..2149837 /locus_tag="PA1966" /note="5-carboxymethyl-2-hydroxymuconate isomerase [Amino acid transport and metabolism]; Region: HpaF; COG3232" /db_xref="CDD:442464" gene complement(2149864..2150364) /locus_tag="PA1967" /db_xref="GeneID:877791" CDS complement(2149864..2150364) /locus_tag="PA1967" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250657.1" /db_xref="GeneID:877791" /translation="MNSIGPASLSGWSARYLNNQRQANTEIGNGDLRKPRPALGTPLR NEAVDPAAESARQAMDEGFAKLNLTLKQNQANAPAGASEGKSAYEEFKEYMQKSPAER MREQVLKSLGLTEEELDAMPPEKREQVEKGIGERMREMIAMQNGQAPGRQEDPTQARA TLNAWI" gene 2150524..2150781 /locus_tag="PA1968" /db_xref="GeneID:878371" CDS 2150524..2150781 /locus_tag="PA1968" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250658.1" /db_xref="GeneID:878371" /translation="MQQVAKRAMTDTPDDRTGEASGLSKRQAFHRQHRQRAEEEARRL LDARAEQGGRWLDWVAGQLYLLRPPEYAAMVRRELQRLSGD" gene 2150828..2151220 /locus_tag="PA1969" /db_xref="GeneID:878387" CDS 2150828..2151220 /locus_tag="PA1969" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250659.1" /db_xref="GeneID:878387" /translation="MPLVRWRSQKIRGGGMPLKQFSSALVLAALLAGCSSNGDGPSTE GASVATGSASAPAATPAADGRCDANAVQAYVGKQASAAIVEEARRAAGAEVARALRPH DAVTMDYNPRRLNIDVDDTLVIKRLSCG" misc_feature 2151023..2151217 /locus_tag="PA1969" /note="Peptidase inhibitor I78 family; Region: Inhibitor_I78; cl46679" /db_xref="CDD:481019" gene complement(2151287..2151526) /locus_tag="PA1970" /db_xref="GeneID:880614" CDS complement(2151287..2151526) /locus_tag="PA1970" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250660.1" /db_xref="GeneID:880614" /translation="MAKALISVLLFSLALAGCASDYNPSRPYSSDEVRQLALEDLARR SLSFEEYQAKRQAILEEKPQTAVSQSNAALRSTAI" misc_feature complement(<2151422..2151526) /locus_tag="PA1970" /note="Outer membrane lipoprotein SlyB [Cell wall/membrane/envelope biogenesis]; Region: SlyB; cl42744" /db_xref="CDD:478445" gene complement(2151755..2153068) /gene="braZ" /locus_tag="PA1971" /db_xref="GeneID:879216" CDS complement(2151755..2153068) /gene="braZ" /locus_tag="PA1971" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="branched-chain amino acid transport system 3 carrier protein" /protein_id="NP_250661.1" /db_xref="GeneID:879216" /translation="MNALKGRDILALGFMTFALFVGAGNIIFPPIVGLQSGPHVWLAA LGFLITAVGLPVITVIALAKVGGSVDALSHPIGRYAGGLLAAVCYLAVGPLFAIPRTA TVSFEVGVVPLLGESGTALFVYSLAYFLLALAISLYPGRLLDTVGRFLAPLKILALAI LGVAAFLWPAGPIGTAQPEYTQAAFSQGFVNGYLTMDTLAALVFGIVIVNAIRSRGVQ SPRLITRYAIVAGLIAGVGLVLVYVSLFRLGAGSHAIAADASNGAAVLHAYVQHTFGS LGSSFLAGLIALACLVTAVGLTCACAEYFCQRLPLSYRSLVIILAGFSFIVSNLGLTK LIQVSIPVLTAIYPPCIVLVALSFCIGLWHSATRILAPVMLVSLAFGVLDALKAAGLG QDFPQWLLHLPLAEQGLAWLIPSVATLAACSLVDRLLGKPAQVAA" misc_feature complement(2151758..2153059) /gene="braZ" /locus_tag="PA1971" /note="Branched-chain amino acid transport protein; Region: Branch_AA_trans; cl00547" /db_xref="CDD:469814" protein_bind 2153249..2153290 /experiment="Beta-gal reporter assay [PMID: 15175299]" /experiment="DNA-array expression analysis [PMID: 15175299]" /experiment="EMSA [PMID: 15175299]" /note="Transcription factor binding site for NP_249584.; Evidence of regulation for: PA1971" /bound_moiety="ArgR" gene 2153594..2155297 /locus_tag="PA1972" /db_xref="GeneID:881487" CDS 2153594..2155297 /locus_tag="PA1972" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250662.1" /db_xref="GeneID:881487" /translation="MSKARAVRPELLTLLVSLAFLLFYNLPLWQRLLAITPGGWQGLG MMLAVGLMIAAIFNLALTLLAFRWLLKPALTLLILAAAGTTYFMTQYGVLMDVGMLRN VMQTNPAEVADLLSPKLAVYLALLGALPVWLLWRTPVRYRPWPRELLSKLLVALACLA LLAGVALANYQGLSSLFRNNKELRLQVTPSNLVGAAIGYAKGQAQAASQPLRPIAVDA RRAALWQGHARKSLTVLVVGESARAQNFGLNGYARETNPRLKAEEGLINFSNVHSCGT ETAVSVPCMFSNLGRADYSDARARTQEGLLDVLQRAGLRVLWRDNQSGCKGTCDRVAF QDLSESKDPALCAGGECHDEILLRDLQAFIDGLQQDTVLVLHQMGSHGPAYFKRYPRE YEKFTPVCASNDFSACSRDSIINGYDNTLLYTDHVLASLIDLLRKNEERIDTGMLYLS DHGESLGEYNLYLHGTPYLLAPDQQKHVGMLAWFSPGYQSAFGLDSGCLRQRSNEELS QDNLFHSMLGLLEVRTGAYDPGLDLFAPCRAPEVLQALKADGGRALYSEEASGQEPPA S" misc_feature 2153597..2155213 /locus_tag="PA1972" /note="Phosphoethanolamine transferase for periplasmic glucans OpgE, AlkP superfamily [Cell wall/membrane/envelope biogenesis]; Region: OpgE; COG2194" /db_xref="CDD:441797" protein_bind complement(2153730..2153742) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(2153781..2153793) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 2155374..2157701 /gene="pqqF" /locus_tag="PA1973" /db_xref="GeneID:878011" CDS 2155374..2157701 /gene="pqqF" /locus_tag="PA1973" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="coenzyme PQQ synthesis protein F" /protein_id="NP_250663.1" /db_xref="GeneID:878011" /translation="MDHHAQHHPRSHACVLPNGLRLHLAHDPAASRAAAWLRVAAGSH DEPSAHPGLAHFLEHLSFLGGAAFPGDERLMPWLQVRGGQVNASTLGKTTDYFFEVTA EHLGAGLARLIDMLARPLLDIDAQRREREVLEAEYLARSADEQTLIDAALALGLPAGH PLRRFAAGRRDSLALESDAFQRALREFHAAHYHAGNCQLWLQGPQTLDELERLAQRAC ADLPGRAPGASPPPPPLLPFACEALALRLPGPPRLVLGFALDALRGADEQTLLAFAEL LGDRSPGGLLAALGEQGLGESVALRVVHRDARQALLALTFELFDGSAAAALEAAFFDW LGALRDDAASLLAARRPLLAEPTAPLERLRQRVLGLPAEIRPACLDALRADRCLRLHL DSELDGAEARWSAGFRLSVAPVAAAPPLAAQRHAWRFELPLPPSAAAEGALFLRWRFP GVPARSRFLALRQALRPLCGQARLGGVEMGLEALGEDWSLSLLGPRDRLEAAVRPALA RLLAAPPDWRANGERLSSAERRRSATGLPIRQLLDALPGLLGEPLAEVDDWRRTRWDA LVMQAAMPDPRWMPGQAAGERLEPLPPRPGRHRRELAVDGESALLLFCPLPTQEVPME AAWRLLARLHEPAFQRRLRDELQLGYALFCGFREVGARRGLLFAAQSPRACPARLLEH METFLQRSAEALAQLPARRLAGLRKALADDLRRAPGSFAERARRAWAEHLGGGAGRSR LLAEAALGLSGDDLLAAQARLLEARGGWWVLSSRR" misc_feature 2155407..2157437 /gene="pqqF" /locus_tag="PA1973" /note="coenzyme PQQ biosynthesis probable peptidase PqqF; Region: PQQ_syn_pqqF; TIGR02110" /db_xref="CDD:273978" gene 2157968..2159167 /locus_tag="PA1974" /db_xref="GeneID:880884" CDS 2157968..2159167 /locus_tag="PA1974" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250664.1" /db_xref="GeneID:880884" /translation="MNKNNTAVRRILPLTLASLGALGGLQPAAADILLYDKDETTFST DGYFNAFYVNSDVDRQGETYDRRQSRVKMGFLPNYIGFNFGRKVDELSLGGRASFWVT INDSETDGTDTAIDVRQFYGTVAGDWGEVLIGKDFGLFSRSNIFLDELLAGFGNPSDT LGLVDGKGVSFGNIGTGYPYPFPTSQITYRNNNLLPGLRIAVGILDPIDSNQIDKDAS DGLDDKAYQDNPRYESEVSYQFDLAGAQVYSWINGGYQTSKNTSDSVDSVTSKGVGYG LQVKMGGFSVTGSGFTAKGINPFFTNNAGEAALREVDSRGALLQGSYSWGKNRLALSY GKTVDDGNGLGSAADYESRGIAYFRTINDNLKLVAELNRYRIDGRDGAALDEDTDTVA LGAVLNW" misc_feature 2158082..2159101 /locus_tag="PA1974" /note="Gram-negative porin; Region: Porin_4; pfam13609" /db_xref="CDD:433346" gene 2159270..2160433 /locus_tag="PA1975" /db_xref="GeneID:877962" CDS 2159270..2160433 /locus_tag="PA1975" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250665.1" /db_xref="GeneID:877962" /translation="MYEGQGEGVCRGMSSARDVEVVAQDLARQLIHPHLGFVLFFCSA EYDLPALAEMLERYFGGIDLVGCTTAGEITPAGYGRGCVSAVGFDVRSFAISSALIDE MERFSLLDAQQMVETLVAGCRRGGLAPIKDHSFALTLLDGLSSREEVVLAALGAALGA IPHFGGSAGDDRHLTHTHVYHQGQFHTGAAVVVLVNTWLDFEVFTTHHVVPRAEKLVV TRADSGSRRVHELNAEPAALEYARLVGVAPQALDFALFSAHPLAVRVDERYYVRSIQQ ANEDLSLTFYCAVENGIVLTAMSTGPLLPNLEAQFRRLHERLGPPLLTIGCDCFLRRL ELEVGGDTQATAAFLRSQQVIGFNTYGEQFNGMHINQTFTGVAIGRPRGGVRR" misc_feature 2159303..2160406 /locus_tag="PA1975" /note="nitric oxide-sensing protein NosP; Region: NosP; NF041558" /db_xref="CDD:469443" gene 2160363..2163008 /gene="ercS'" /locus_tag="PA1976" /db_xref="GeneID:880111" CDS 2160363..2163008 /gene="ercS'" /locus_tag="PA1976" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="sensor histidine kinase" /protein_id="NP_250666.1" /db_xref="GeneID:880111" /translation="MACISTRPSPGSPLADPAEVSVAELQARVVALEEERHKLQRINQ ALIGRIESSAAQSDEAYGAFQYSVVLAEQVRERTDALSQTMLELKASNQLLSDARLRA ETAHQHLLDAIESISDAFVLFDPQQRIVLFNERFRALWIDSRARIGPGMRRAELHRLA RSGGLIVEEQRGGDQQTLYRLRDERWLRMSERPTRDGGLAVLYSDVTEIKLSETARRE QALAQKSHLLQRAVDNLSQGVAMVGADGVLELWNRRFLELCGLAPIAGHRAFAEVMAE SELPLLTPRSQDSQGSPLSAREQRLFDGRVLEIRTHALPTGGFVNTFTDITERYRHAE ALRASERWIRLITDQVPALIAYLSDELVYEFTNKVYEEWYRWPSGSMLGRCLRDVHGA EHCRRLEPYFERALAGESVTFEIAETALSGEERYMQRSYVPNRQADGRVAGLFVLIRD ITERRRTAEALHQAYQNLEQRVRERTAELTTLNDQFKREIHERSQVEARLREAKREAE QANLSKTKFLAAVSHDLLQPLNAARLFTSALQERGSATRDNEALVNNISHSLEDVENL LGTLVDISKLDAGVITPDIAPFELGELLGNLAAEYRQVAASEGLRLDFVACGALVRSD QQLLARILRNLLSNAIRYTPRGRVLLGCRRHRQRLSIEVWDTGVGIAADKLGEIFQEF KRGESQRCHQDRGLGLGLAIVDKIARMLGHRVRVGSLPGKGSCFAIEVPLARHAPRSR AEPLASADDLRERLRGSRVWVLDNDAAICAGMRTLLEAWGCRVVTALSEEDLARQVDN YHAEADLLIVDYHLDDQRNGVDAVAAINARRGSPLPALMITANYSNELKQQVRELGHT LMHKPVRPMKLKTALCHLLEREASV" misc_feature 2160699..2161001 /gene="ercS'" /locus_tag="PA1976" /note="PAS fold; Region: PAS_7; pfam12860" /db_xref="CDD:432837" misc_feature 2161008..2161745 /gene="ercS'" /locus_tag="PA1976" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature 2161404..2161730 /gene="ercS'" /locus_tag="PA1976" /note="PAS fold; Region: PAS_4; pfam08448" /db_xref="CDD:312075" misc_feature 2161599..2162561 /gene="ercS'" /locus_tag="PA1976" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: BaeS; COG0642" /db_xref="CDD:440407" misc_feature 2162619..2163002 /gene="ercS'" /locus_tag="PA1976" /note="CheY-like REC (receiver) domain, includes chemotaxis protein CheY and sporulation regulator Spo0F [Signal transduction mechanisms]; Region: CheY; COG0784" /db_xref="CDD:440547" gene complement(2163010..2163873) /locus_tag="PA1977" /db_xref="GeneID:878077" CDS complement(2163010..2163873) /locus_tag="PA1977" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250667.1" /db_xref="GeneID:878077" /translation="MPDRRTLLLTVLAMLAFAGNSLLCRAALKDTAIDAVSFTALRLF SGALMLAVLLHLRRRPATPARGGWRGAAALFVYAAAFSYAYVQLDAGTGALLLFGAVQ VTLLLAGLLRGERLGGQALLGFLLALGGLLFLLLPGASAPPLGGALLMLLSGLAWGLY TLLGRGGGDPLAVSAGNFLRALAFAALLLLAFHGQLRLDGAGLAYALLSGALASGLGY AVWYSALPGLTAIQGASVQLSVPVLAALCGALLLGEPLAPRLPPATLAVLGGIALILA PRLGRAAREGA" misc_feature complement(2163025..2163864) /locus_tag="PA1977" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene complement(2163883..2164548) /locus_tag="PA1978" /db_xref="GeneID:880879" CDS complement(2163883..2164548) /locus_tag="PA1978" /note="'Product name confidence: class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene'" /codon_start=1 /transl_table=11 /product="glycerol metabolism activator" /protein_id="NP_250668.1" /db_xref="GeneID:880879" /translation="MYKILIADDHPLFREAIHNVIADGFPGSEVMETADLDSALGLTQ EHDDLDLILLDLNMPGMHGLNGLMNLRNEAPTIPVVIVSAEQDKQVVLQAITYGAVGF ITKSSPRAQMTEAIEQILNGNVYLPSDVIRTQKSSPRRSGHEEHGISPELLQALTRKQ LLVLERMTKGESNKQIAYNLDIAETTVKAHVSAILRKLKVHNRVQAILSAGDIDFAAY LRR" misc_feature complement(2164186..2164539) /locus_tag="PA1978" /note="phosphoacceptor receiver (REC) domain of NarL (Nitrate/Nitrite response regulator L) family response regulators; Region: REC_NarL-like; cd17535" /db_xref="CDD:381090" misc_feature complement(2163928..>2164377) /locus_tag="PA1978" /note="DNA-binding response regulator, FixJ family, consists of REC and HTH domains [Signal transduction mechanisms, Transcription]; Region: FixJ; COG4566" /db_xref="CDD:443623" gene 2165213..2165863 /gene="eraS" /locus_tag="PA1979" /db_xref="GeneID:880447" CDS 2165213..2165863 /gene="eraS" /locus_tag="PA1979" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="sensor kinase EraS" /protein_id="NP_250669.1" /db_xref="GeneID:880447" /translation="MDDLRPAGPAEYRWLLAVQERERRLLAQAVHDDIGQYLTGIRTQ LLLLRCTAGDGQPALARLERYCQGLDDSFRALLRGLPPPALQRQSLDEALRACVADWQ EGQGIACELRLGGPLPPLDAAAGTHLYRLLQEALNNVARHAGASRVRIRLQCRGGFLY LSVRDDGRGCAADPAPGFGLDSMRQRARCLGAELSLRSRPGQGLALRLRMPLERDD" misc_feature 2165255..2165857 /gene="eraS" /locus_tag="PA1979" /note="Signal transduction histidine kinase ComP [Signal transduction mechanisms]; Region: ComP; COG4585" /db_xref="CDD:443642" gene 2165876..2166553 /gene="eraR" /locus_tag="PA1980" /db_xref="GeneID:880513" CDS 2165876..2166553 /gene="eraR" /locus_tag="PA1980" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="response regulator EraR" /protein_id="NP_250670.1" /db_xref="GeneID:880513" /translation="MKVLLVDDHFVVREGLAALLRGLLPDVEVNEAGDGEEALQAVQR EIPSLVIVDLGLPGISGLELTRRLRQRLPQLRVLFFSLHDELALVRQALDAGARGYVT KRAAPTVLLEAIRRVLAGQLYLEQPLATRLACQSWEEQGGAALRGLTRREFEIFRLLA RGLALREVAEHLGVSAKTVSNHVSLLKQKLQVSTQAELVHRAIDSGVLRLGLPLPLAE EARGSLG" misc_feature 2165876..2166490 /gene="eraR" /locus_tag="PA1980" /note="transcriptional regulator UhpA; Region: PRK10360" /db_xref="CDD:182408" gene complement(2166580..2167227) /locus_tag="PA1981" /db_xref="GeneID:880196" CDS complement(2166580..2167227) /locus_tag="PA1981" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250671.1" /db_xref="GeneID:880196" /translation="MKTFLLCAALLGAGLAQAADDIDDVRVIAGCRLEPGARCAKADL RGADLRNLDLGRIDLAGADLSGADLRHARLDLANLEKANLRGADLTRASLQQANLRGA DLSGARAVAIQAWGLFAQGAQWQGADLTAAYLEFARLSGGRLHQATLRAADLEMTWLS RADLKGADLRDANLQEVKLAEANLEDADLRGSKVRFGNFQGSNMQGCKDCPAGWQ" misc_feature complement(2166631..2167122) /locus_tag="PA1981" /note="Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; Region: YjbI; COG1357" /db_xref="CDD:440968" gene complement(2167281..2169152) /gene="exaA" /locus_tag="PA1982" /db_xref="GeneID:880475" CDS complement(2167281..2169152) /gene="exaA" /locus_tag="PA1982" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="quinoprotein ethanol dehydrogenase" /protein_id="NP_250672.1" /db_xref="GeneID:880475" /translation="MTTRTSPAPAGLLRPSLHCLAFAVALGSAGAALAKDVTWEDIAN DDKTTGDVLQYGMGTHAQRWSPLKQVNADNVFKLTPAWSYSFGDEKQRGQESQAIVSD GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD ASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVG RLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSH GGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSS GEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKL QNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNP MAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPV SGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSP PITWEQDGEQYLGVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLPSWDNRTASR" misc_feature complement(2167395..2169047) /gene="exaA" /locus_tag="PA1982" /note="PQQ-dependent dehydrogenase, methanol/ethanol family; Region: PQQ_enz_alc_DH; TIGR03075" /db_xref="CDD:274419" gene 2169464..2169901 /gene="exaB" /locus_tag="PA1983" /db_xref="GeneID:880387" CDS 2169464..2169901 /gene="exaB" /locus_tag="PA1983" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="cytochrome C550" /protein_id="NP_250673.1" /db_xref="GeneID:880387" /translation="MNKNNVLRGLLVLAGLSLSSLALAHGDVTPQAVDTKGLEPLGKE WRDTNPYRKPYAKHDLAVEIGASAYNQNCARCHGLEAKSGGIAPDLRLLETGAEGDEW FKERVINGAVRDGAVYMPKMADFISQEGLWAIRSYLESVHVDE" misc_feature 2169488..2169895 /gene="exaB" /locus_tag="PA1983" /note="cytochrome c-550 PedF; Region: c550_PedF; TIGR04494" /db_xref="CDD:275287" gene 2169988..2171508 /gene="exaC" /locus_tag="PA1984" /db_xref="GeneID:880413" CDS 2169988..2171508 /gene="exaC" /locus_tag="PA1984" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="NAD+ dependent aldehyde dehydrogenase ExaC" /protein_id="NP_250674.1" /db_xref="GeneID:880413" /translation="MIYAAPGTPGAVVTFKPRYGNYIGGEFVPPVKGQYFTNTSPVNG QPIAEFPRSTAEDIDKALDAAHAAAEAWGRTSVQERSNILLKIADRIEQNLELLAVTE TWDNGKAVRETLNADIPLAADHFRYFAGCIRAQEGSAAEINDSTVAYHIHEPLGVVGQ IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLGICVLLELIGDLLPPGVLNVVQG FGREAGEALATSKRIAKIAFTGSTPVGSHILKCAAENIIPSTVELGGKSPNIYFEDIM QAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALVQESIYPAFMEEVLKKVRAIKRGDPL DTETMVGAQASQQQYEKILSYLDIAQQEGAELLAGGSVEKLEGNLASGYYIQPTLLKG HNGMRVFQEEIFGPVVGVTTFKDEAEALAIANDTEYGLGAGLWTRDINRAYRMGRGIK AGRVWTNCYHLYPAHAAFGGYKKSGVGRETHKMMLDHYQQTKNLLVSYDINPLGFF" misc_feature 2170042..2171481 /gene="exaC" /locus_tag="PA1984" /note="Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like; Region: ALDH_ACDHII_AcoD-like; cd07559" /db_xref="CDD:143471" misc_feature order(2170468..2170482,2170504..2170506,2170549..2170551, 2170555..2170560,2170699..2170710,2170717..2170719, 2170726..2170731,2170771..2170779,2170888..2170890, 2171191..2171193,2171197..2171199,2171275..2171277, 2171389..2171391) /gene="exaC" /locus_tag="PA1984" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:143471" misc_feature order(2170480..2170482,2170771..2170773,2170879..2170881, 2170888..2170890) /gene="exaC" /locus_tag="PA1984" /note="catalytic residues [active]" /db_xref="CDD:143471" gene 2171865..2171936 /gene="pqqA" /locus_tag="PA1985" /db_xref="GeneID:880480" CDS 2171865..2171936 /gene="pqqA" /locus_tag="PA1985" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="coenzyme PQQ synthesis protein A" /protein_id="NP_250675.1" /db_xref="GeneID:880480" /translation="MWTKPSFTDLRLGFEVTLYFANR" misc_feature 2171865..2171933 /gene="pqqA" /locus_tag="PA1985" /note="pyrroloquinoline quinone precursor peptide PqqA; Region: pqqA; PRK00284" /db_xref="CDD:178960" gene 2171989..2172903 /gene="pqqB" /locus_tag="PA1986" /db_xref="GeneID:880354" CDS 2171989..2172903 /gene="pqqB" /locus_tag="PA1986" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="coenzyme PQQ synthesis protein B" /protein_id="NP_250676.1" /db_xref="GeneID:880354" /translation="MHIRILGSAAGGGFPQWNCNCRNCRGVRDGSVAAQPRTQSSIAL SDDGERWILCNASPDIRAQIAAFPALQPARRPRDTAIGAIVLLDSQIDHTTGLLSLRE GCPHEVWCTQMVHQDLSEGFPLFPMLSHWNGGLRHRPIALDGEPFAIPACPRLRFTAI PLRSSAPPYSPHRGDPHPGDNIGLFVEDLDSAGALFYAPGLGEVDEALLEWMRRADCL LVDGTLWRDDEMLVCEVGDKLGRQMGHLAQSGPGGMLEVLAKVPAARKVLIHINNTNP ILDTASAERAELDASGIEVAWDGMHIQL" misc_feature 2171989..2172900 /gene="pqqB" /locus_tag="PA1986" /note="pyrroloquinoline quinone biosynthesis protein PqqB; Provisional; Region: PRK05184" /db_xref="CDD:235361" misc_feature order(2172250..2172252,2172256..2172258,2172262..2172267, 2172517..2172522,2172586..2172588,2172649..2172651) /gene="pqqB" /locus_tag="PA1986" /note="putative active site [active]" /db_xref="CDD:293832" misc_feature order(2172262..2172264,2172649..2172651) /gene="pqqB" /locus_tag="PA1986" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:293832" gene 2172913..2173665 /gene="pqqC" /locus_tag="PA1987" /db_xref="GeneID:879112" CDS 2172913..2173665 /gene="pqqC" /locus_tag="PA1987" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="pyrroloquinoline-quinone synthase" /protein_id="NP_250677.1" /db_xref="GeneID:879112" /translation="MSRAAMDRAEFERALRDKGRYYHIHHPFHVAMYEGRASREQIQG WVANRFYYQVNIPLKDAAILANCPDREVRREWIQRILDHDGAPGEAGGIEAWLRLAEA VGLEREQVLSEERVLPGVRFAVDAYVNFARRASWQEAASSSLTELFAPQIHQSRLDSW PRHYPWIEAAGYEYFRSRLAQARRDVEHGLRITLEHYRTREAQERMLDILQFKLDVLW SMLDAMSMAYELERPPYHTVTRERVWHRGLAS" misc_feature 2172928..2173635 /gene="pqqC" /locus_tag="PA1987" /note="heme oxygenase; Region: HemeO-like; cl15243" /db_xref="CDD:449518" gene 2173662..2173940 /gene="pqqD" /locus_tag="PA1988" /db_xref="GeneID:879085" CDS 2173662..2173940 /gene="pqqD" /locus_tag="PA1988" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="coenzyme PQQ synthesis protein D" /protein_id="NP_250678.1" /db_xref="GeneID:879085" /translation="MSLPSLDSVPMLRRGFRFQFEPAQDCHVLLYPEGMVKLNDSAGE ILKLVDGRRDVAAIVAALRERFPEVPGIDEDILAFLEVAHAQFWIELQ" misc_feature 2173677..2173937 /gene="pqqD" /locus_tag="PA1988" /note="pyrroloquinoline quinone biosynthesis peptide chaperone PqqD; Region: PRK02079" /db_xref="CDD:179362" gene 2173912..2175057 /gene="pqqE" /locus_tag="PA1989" /db_xref="GeneID:880128" CDS 2173912..2175057 /gene="pqqE" /locus_tag="PA1989" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="coenzyme PQQ synthesis protein E" /protein_id="NP_250679.1" /db_xref="GeneID:880128" /translation="MRNSGSSCSESVGPPLWLLAELTYRCPLQCPYCSNPLEFAREGA ELSTAEWIEVFRQARELGAAQLGFSGGEPLLRQDLAELIEAGRGLGFYTNLITSGIGL DEARLARFAEAGLDHVQISFQAADEEVNNLLAGSRKAFAQKLAMARAVKAHGYPMVLN FVTHRHNIDNIERIIQLCIELEADYVELATCQFYGWAALNRAGLLPTRAQLERAERIT AEYRQRLAAEGNPCKLIFVTPDYYEERPKACMGGWASVFLDITPDGTALPCHSARQLP VQFPNVREHSLRHIWYESFGFNRYRGDAWMPEPCRSCEEKERDHGGCRCQAFLLTGDA DATDPVCAKSARHDLILAARRQAEEAPLGLDALTWRNQRASRLICKA" misc_feature 2173939..2175024 /gene="pqqE" /locus_tag="PA1989" /note="coenzyme PQQ biosynthesis enzyme PqqE; Region: PQQ_syn_pqqE; TIGR02109" /db_xref="CDD:162708" gene 2175062..2176888 /gene="pqqH" /locus_tag="PA1990" /db_xref="GeneID:880121" CDS 2175062..2176888 /gene="pqqH" /locus_tag="PA1990" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="peptidase" /protein_id="NP_250680.1" /db_xref="GeneID:880121" /translation="MVDYGDWPSDWSAERAVAAGRDFSELKAAHGGLAWVEFDPASAR SRLYLWRDGVLEEPTAPDGSVRSRVYEYGGGACCVTLDGLAWVDETDQQVRRWRAGRA AQVLGGGAQCRYGDLAYVDAWDALLAVEESHGPTGVMHRIVRLDADGARRVLVEGADF YAAPRAAGQGRRLAWIEWDRPHQPWTETRLGLAENGRTRCLAGAGGGESIQQPRFDPA GRLHWLSDRDGWWRPCAEVALAGRFADADHAGAPWQLGACSYLPLGEGRLLLSRVEAG GGQLFLREADGSERRLAADWNRFAGLAADARAFYCIAAAAGRLPALLAIHRDELRVEV LRGGERPLAEDDLSHPQAFVYGLGNGENGHGFFYPPRNARRRVDPRRPPPLLVWLHGG PTSMHSPAFDAGLQFWTQRGFAVAALNYRGSSGYGRAYRQRLRGQWGRLELRDIEAAL AQLDAEGWIDRARVFVRGASAGGYSALRALACLDGLRGGASLYGVSDPLALARCTHKF EGDYLDWLIGDPQRQRRRYLVRSPVLQVGRIRAPVVFFQGGLDAVVVPEQTEAMVAGL RRSGVRVECHRYPQERHGFRQPANRAHALLAEWRFYLGLLED" misc_feature 2176136..2176867 /gene="pqqH" /locus_tag="PA1990" /note="Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]; Region: DAP2; COG1506" /db_xref="CDD:441115" gene 2176974..2178137 /locus_tag="PA1991" /db_xref="GeneID:878317" CDS 2176974..2178137 /locus_tag="PA1991" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="iron-containing alcohol dehydrogenase" /protein_id="NP_250681.1" /db_xref="GeneID:878317" /translation="MSHDLSQLRKFVSPEIIFGAGCRHSVANYVKTFGARKVLLVSDP GVLAAGWVADIQASLEGQGIDYCLYTDVSPNPRVDEVMLGAEFYRSEGCNVIVAVGGG SPMDCAKGIGIVAAHGRSILEFEGVDRLRVPSPPLILIPTTAGTSADVSQFVIISNQD ERMKFSVVSKAVVPDVSLIDPETTLTMDPFLSACTGIDALVHAIEAFVSTGHGPLTDP HALEAMRLIDGNLVQMIANPGDIALREKIMLGSMQAGLAFSNAILGAVHAMSHSLGGY LDLPHGLCNAALVEHVVAFNYSAAPERFKVIAETFGIDCRGLTQGQVRQRLVDHLIAF KHAVGFHESLALHGVGSSDIPFLSRHAMQDPCILTNPRESSQRDVEVVYGEAL" misc_feature 2177001..2178122 /locus_tag="PA1991" /note="iron-containing alcohol dehydrogenases (Fe-ADH)-like; Region: Fe-ADH-like; cd17814" /db_xref="CDD:341489" misc_feature order(2177100..2177102,2177274..2177282,2177289..2177291, 2177298..2177300,2177397..2177402,2177406..2177408, 2177463..2177468,2177520..2177522,2177544..2177546, 2177565..2177567,2177577..2177579,2177772..2177774, 2177784..2177786,2177814..2177816) /locus_tag="PA1991" /note="putative active site [active]" /db_xref="CDD:341489" misc_feature order(2177565..2177567,2177577..2177579,2177772..2177774, 2177814..2177816) /locus_tag="PA1991" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:341489" protein_bind complement(2177654..2177666) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 2178121..2179815 /gene="ercS" /locus_tag="PA1992" /db_xref="GeneID:880217" CDS 2178121..2179815 /gene="ercS" /locus_tag="PA1992" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="sensor histidine kinase" /protein_id="NP_250682.1" /db_xref="GeneID:880217" /translation="MARPSEQQQEALAGLLGLGSHSARKSHYPELLARLEELEAERNR YKWLFEHAVHGIFQASLGQGLRAANPALAQMLGYDDPQQVLWSLEDMAGQLFVGGEAE MRRIRALLRERGGLFGYETRLWRRDGSHIEVLMNLLLRHDEEELVEGFVADITERVQA QQRLQTMNEELERRVAERTHELEELNRQLRQARDAAEAANHSKDKYLAAASHDLLQPL NAARLLVDTLRERGLPAAELQLVERTHLALEGAETLLTDLLEIARLDQSAIRPDLDDY SLDELLAPLASEFEEVARAAGLALRARIPRLAVRTDARLLSRILRNLLSNACRYTERG SVLLGARRRGGKVRLEVWDTGRGIPADQLQAIFLEFNQLDAGRASERRGVGLGLAIVD RIAGILGYRIEVHSTPGRGSLFAIEVPLVRKPARPAPGEAIARVSAGDPLPGRRLLVV DNETEILFSMSALLGQWGCEVLTATDLEGARKALDGRAPDAILVDYHLDHGATGCQLL GALREDYGAEIAAVMITADRSDDCRRALARLGVPLLNKPLKPGKLRAALSALLGEL" misc_feature 2178250..>2178690 /gene="ercS" /locus_tag="PA1992" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature 2178682..2179380 /gene="ercS" /locus_tag="PA1992" /note="K+-sensing histidine kinase KdpD [Signal transduction mechanisms]; Region: KdpD; COG2205" /db_xref="CDD:441807" misc_feature 2179441..2179806 /gene="ercS" /locus_tag="PA1992" /note="CheY-like REC (receiver) domain, includes chemotaxis protein CheY and sporulation regulator Spo0F [Signal transduction mechanisms]; Region: CheY; COG0784" /db_xref="CDD:440547" gene complement(2179848..2181056) /locus_tag="PA1993" /db_xref="GeneID:880155" CDS complement(2179848..2181056) /locus_tag="PA1993" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250683.1" /db_xref="GeneID:880155" /translation="MSVDIRPTPPAQDSARQNVTLQIVSVVMFTFIGYLTIGIPLAVL PGYVHDDLGYGSVLAGLVISLQYLATLLARPYAGRVIDGLGPKRAVLYGMAGSAASGL FMLLSVAIQGWPALSLASLLVGRLVLGAAESLVGSAAIGWGIGRVGAPHTAKVISWNG IASYGAIALGAPLGVLLVQWLGLWSMGASIVLLGALGFALAWPKLPAPLVHGERLPFH HVLGRVTPHGMGLALGAIGFGTIATFITLYYASRGWANAVLCLSAFGGCFIGARLLFA NSINRLGGFRVAIICLGVESLGLLLLWSAPNPWVGLAGAALTGFGFSLVFPAFGVEAV NLVPASNRGAALGAYSLFVDLSLGITGPLVGFVANLFGFRSMFLFACLASLGGLALAV ALHRRSRRPG" misc_feature complement(2179851..2181035) /locus_tag="PA1993" /note="major facilitator superfamily transporter; Provisional; Region: PRK05122" /db_xref="CDD:235348" gene complement(2181181..2181744) /locus_tag="PA1994" /db_xref="GeneID:880185" CDS complement(2181181..2181744) /locus_tag="PA1994" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250684.1" /db_xref="GeneID:880185" /translation="MSRDRLYTWAGLWRSPSSSWEALRLEDDQAESQLRAPDERSGLP YQLDYRLRWDADWHLREAVFHVESETGVRKLHLLADGRGHWQDGDGEALPAFDGCLDI DIWPSPFTNTFPIRRLGLADGQRAEIRALYIEAPALEPRSMRQAYTRLDASHYLYENL EGSAFKAVLLVDEQGLVIDYPGLFQRL" misc_feature complement(2181184..2181732) /locus_tag="PA1994" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3554" /db_xref="CDD:442775" gene complement(2181741..2182097) /locus_tag="PA1995" /db_xref="GeneID:879816" CDS complement(2181741..2182097) /locus_tag="PA1995" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250685.1" /db_xref="GeneID:879816" /translation="MTTDQIAAFCLQLPGAREDLKWGSNRVFSVAGNKMFAILDFVDK DGGLAFKVGSELFLGYVDRPGIRPAPYLARAHWIVMARPYPMKAAELREALVRSHQLV VARLPKRQRLGLVLDA" misc_feature complement(2181756..2182097) /locus_tag="PA1995" /note="Predicted DNA-binding protein with #double-wing# structural motif, MmcQ/YjbR family [Transcription]; Region: MmcQ; COG2315" /db_xref="CDD:441889" gene complement(2182116..2182394) /gene="ppiC1" /locus_tag="PA1996" /db_xref="GeneID:878481" CDS complement(2182116..2182394) /gene="ppiC1" /locus_tag="PA1996" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase C1" /protein_id="NP_250686.1" /db_xref="GeneID:878481" /translation="MPVAMARHILVKTEAEAAQLKQRLAKGEDFATLAKKHSTCPSGK RGGDLGEVRPGQMVRSIDNAIFRKPVGVLQGPLKSQFGYHLLEVYFRD" misc_feature complement(<2182131..2182379) /gene="ppiC1" /locus_tag="PA1996" /note="Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, chaperones]; Region: SurA; COG0760" /db_xref="CDD:440523" gene complement(2182452..2184407) /locus_tag="PA1997" /db_xref="GeneID:879127" CDS complement(2182452..2184407) /locus_tag="PA1997" /EC_number="6.2.1.16" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetoacetyl-CoA synthetase" /protein_id="NP_250687.1" /db_xref="GeneID:879127" /translation="MPAPLWSPSAERIAASRMEAFRRFVNQRHALGLVDYPALHAWSV QRREAFWQAIVDFFEVRFQQPPRAVLEEGAQMPSARWFPGATLNFAEHLLRRRDDAPA LIAVSEDGRREVLSHAELARHVAGLQKRLAALGIGPGDRVAALMPNTWQTVVGMLATA SLGATWSSCSPDFGTQGVIDRFGQIEPRVLIACAGYRYAGKSLDLTAKLNEVLAGLPG LEQLLVVPYDRPQAQPQDYRCQAQVALWDGFYQAEGEPVFTPVPFEQPLYILYSSGTT GVPKCIVHATGGVLLQHLKEHGLHTDLGDGDRLFYYTTCGWMMWNWLASGLAVGASLV LYDGSPFHPGPERLLDLIDAEDIAVFGASAKYLAALEKAGMRPRHSHRLDSLRTLLST GSPLAHESFDYVYRELKSDLCLSSISGGTDIVSCFAIGNPVLPVWRGELQCKALGMAV EIWDDDGRRLASGKGELVCTRHFPSIPLGFWNDPDGTRFHDAYFASFPGVWAHGDYAE ETVHGGLVIHGRSDAVLNPGGVRIGTAEIYRQVEKVEEVLESIAIGQDWQGDVRVLLF VRLRDGVRLDEPLRERIRQTIRANATPRHVPAKIIQVADIPRTLSGKIVELAVRNVIH GRPVKNTDALANPQALELYRDLAELRD" misc_feature complement(2182455..2184407) /locus_tag="PA1997" /note="acetoacetate--CoA ligase; Region: PRK03584" /db_xref="CDD:235134" misc_feature complement(order(2183568..2183573,2183577..2183594, 2183601..2183603)) /locus_tag="PA1997" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341265" misc_feature complement(order(2182569..2182571,2182815..2182817, 2182848..2182850,2182857..2182859,2182893..2182895, 2183145..2183162,2183229..2183234,2183592..2183594)) /locus_tag="PA1997" /note="putative AMP binding site [chemical binding]; other site" /db_xref="CDD:341265" misc_feature complement(order(2182626..2182628,2182815..2182826, 2182848..2182850,2182857..2182859,2182893..2182895, 2183145..2183162,2183229..2183234,2183310..2183312, 2183319..2183324,2183328..2183330,2183466..2183471, 2183592..2183594)) /locus_tag="PA1997" /note="putative active site [active]" /db_xref="CDD:341265" misc_feature complement(order(2182626..2182628,2182644..2182646, 2182818..2182826,2183232..2183234,2183310..2183312, 2183319..2183324,2183469..2183471)) /locus_tag="PA1997" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:341265" gene complement(2184475..2185395) /gene="dhcR" /locus_tag="PA1998" /db_xref="GeneID:879084" /db_xref="PseudoCap:PA1998" CDS complement(2184475..2185395) /gene="dhcR" /locus_tag="PA1998" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="transcriptional regulator DhcR" /protein_id="NP_250688.1" /db_xref="GeneID:879084" /db_xref="PseudoCap:PA1998" /translation="MTVKQLRAFLAVAQSLSFAQAGERLHLSQPALSLAIKSLEESLG GPLLERTTRSVSLTPEGETLLPLALRLLADWDNTEELLRQHFTLQLGKVSIAAMPSFA GNLLPLVLKTFRERHPRVNVAVHDVINEQVLEMVRNRRVELGIAFEPESLENLEFTPF YSDRFVAVVPTGSSLSGQERISWRELLGEPFITLQRPSAVRLLLEESVAAEHGRLPVA FESHQLVTVGRMVAQGLGVSAVPTLCIQQMQELGARCLPLYAPQVQRRVGLLRLSEHK LSTAAQALSDVLLHGTDWRSLALPQDQSTE" misc_feature complement(2185210..2185386) /gene="dhcR" /locus_tag="PA1998" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(2184532..2185122) /gene="dhcR" /locus_tag="PA1998" /note="TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold; Region: PBP2_LTTR_like_4; cd08440" /db_xref="CDD:176131" misc_feature complement(order(2184697..2184702,2184706..2184711, 2184727..2184744,2185018..2185038,2185042..2185044, 2185054..2185056,2185063..2185068,2185072..2185077)) /gene="dhcR" /locus_tag="PA1998" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176131" gene 2185527..2186225 /gene="dhcA" /locus_tag="PA1999" /db_xref="GeneID:878889" /db_xref="PseudoCap:PA1999" CDS 2185527..2186225 /gene="dhcA" /locus_tag="PA1999" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="dehydrocarnitine CoA transferase subunit A" /protein_id="NP_250689.1" /db_xref="GeneID:878889" /db_xref="PseudoCap:PA1999" /translation="MSGLDKRVGSYEEALEGLTDGMTVLAGGFGLCGIPENLIAEIRR RGVRDLTVVSNNCGVDGFGLGVLLEDRQIRKMIASYVGENALFEQQLLSGELEVELTP QGSLAEKIRAGGAGIPAFFTATGYGTPVAEGKEAREFNGRHYILEPAITGDFAIVKGW KADHFGNVVYRHTAQNFNPLVATAGRITVVEVEEIVEPGELDPTQIHTPGIYVDRIIQ GRFEKRIEKRTLRA" misc_feature 2185539..2186201 /gene="dhcA" /locus_tag="PA1999" /note="Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid transport and metabolism]; Region: AtoD; COG1788" /db_xref="CDD:441394" gene 2186260..2186916 /gene="dhcB" /locus_tag="PA2000" /db_xref="GeneID:878555" /db_xref="PseudoCap:PA2000" CDS 2186260..2186916 /gene="dhcB" /locus_tag="PA2000" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="dehydrocarnitine CoA transferase subunit B" /protein_id="NP_250690.1" /db_xref="GeneID:878555" /db_xref="PseudoCap:PA2000" /translation="MALTREQMAQRVARELKDGYYVNLGIGIPTLVANYVPEGIDVML QSENGLLGMGAFPSEAEVDADMINAGKQTVTARVGASIFDSAQSFAMIRGGHVDLTVL GAFEVDVRGNIASWMIPGKLVKGMGGAMDLVAGAENIIVTMTHASKDGESKLLPYCTL PLTGCGCIRKVLTDLAYLEIEDGAFILRERAPGVSVEEIVAKTAGKLIVPEHVPEMSF " misc_feature 2186266..2186886 /gene="dhcB" /locus_tag="PA2000" /note="3-oxoacid CoA-transferase, B subunit; Region: pcaJ_scoB_fam; TIGR02428" /db_xref="CDD:188219" gene 2187065..2188246 /gene="atoB" /locus_tag="PA2001" /db_xref="GeneID:879046" CDS 2187065..2188246 /gene="atoB" /locus_tag="PA2001" /EC_number="2.3.1.9" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="acetyl-CoA acetyltransferase" /protein_id="NP_250691.1" /db_xref="GeneID:879046" /translation="MQDVVIVAATRTAVGSFQGSLAGIPAPELGAAVIRRLLEQTGLD AGQVDEVILGQVLTAGSGQNPARQAAIKAGLPVGVPAMTLNKVCGSGLKALHLGAQAI RCGDAEVIVAGGQENMSLAPYVMPGARTGLRMGHAKLVDSMIEDGLWDAFNDYHMGIT AENLAEKYGLTREEQDAFAAASQQKAIAAIEGGRFRDEITPIQVPQRKGEPLGFDTDE QPRAGTTVEALAKLKPAFRKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLARI ASYASAGVDPAIMGIGPVSATRRALDKAGWSLEQLDLIEANEAFAAQSLAVGRELGWD AARVNVNGGAIALGHPIGASGCRVLVTLLHEMIRRDAKKGLATLCIGGGQGVALTLAR D" misc_feature 2187065..2188243 /gene="atoB" /locus_tag="PA2001" /note="acetyl-CoA C-acetyltransferase; Region: PRK05656" /db_xref="CDD:168156" gene 2188459..2189883 /locus_tag="PA2002" /db_xref="GeneID:878784" CDS 2188459..2189883 /locus_tag="PA2002" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250692.1" /db_xref="GeneID:878784" /translation="MTAILPIQESRSARFAMRCSNWAERWFPDSWVFAALAILIVSLA ALAMGAGPTATAKAFGDGFWSLIPFTMQMAFVVIGGYVVASSGPASRLIDLLARVPKN GRSAVCWVALVSMLASLLNWGLSLVFGGLLVRALARRSDLRMDYRAAGAAAYLGLGAV WALGLSSSAAQLQANPASLPPSILAITGVIPFTETIFLWQSGVMLLALILVSLVIAYM TAPSAASARDAKDCGVDVSFTAPARLAPTRPGEWLEHSPLLIILLVLLAGGWLVHEFS TKPAILAISGLNTYNLLFLMLGALLHWRPRSFLDAVARAVPTTTGVLIQFPLYGSIAA IMTTVNGSDGETLAHHISTFFVQIASHDTYALLMGVYSAVLGFFIPSGGGKWIIEAPY VMQVANELQYHLGWAVQIYNAAEALPNLINPFYMLPLLGVLGLKARDLIGFSFVQLLV HIPLVLVLLWALGSTLAYIPPVMP" misc_feature 2188495..2189847 /locus_tag="PA2002" /note="Short chain fatty acids transporter [Lipid transport and metabolism]; Region: AtoE; COG2031" /db_xref="CDD:441634" gene complement(2190084..2190854) /gene="bdhA" /locus_tag="PA2003" /db_xref="GeneID:879996" CDS complement(2190084..2190854) /gene="bdhA" /locus_tag="PA2003" /EC_number="1.1.1.30" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-hydroxybutyrate dehydrogenase" /protein_id="NP_250693.1" /db_xref="GeneID:879996" /translation="MTLKGKTALVTGSTSGIGLGIALSLAEAGADLLLNGFGEVDAAL AQVRARGVRAEHHPADLSSPEQIGELMAFAERTFGGVDILVNNAGIQYVAPVQEFPTE RWDAIIAINLSSVFHTTRLALPGMLARGWGRIVNIASTHGLVASAGKSAYVAAKHGVL GLTKSVALETARTPVTCNAICPGWVLTPLVQKQIDARTAEGVSPEQAEHDLLAEKQPS LAFVTPEQLGGLTLFLCSEAADQVRGAAWNMDGGWVAQ" misc_feature complement(2190087..2190845) /gene="bdhA" /locus_tag="PA2003" /note="A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous...; Region: Rossmann-fold NAD(P)(+)-binding proteins; cl21454" /db_xref="CDD:473865" misc_feature complement(order(2190300..2190311,2190387..2190389, 2190399..2190401,2190438..2190446,2190588..2190596, 2190741..2190749,2190804..2190806,2190810..2190815, 2190819..2190821)) /gene="bdhA" /locus_tag="PA2003" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187644" misc_feature complement(order(2190387..2190389,2190399..2190401, 2190438..2190440,2190522..2190524)) /gene="bdhA" /locus_tag="PA2003" /note="active site" /db_xref="CDD:187644" gene complement(2190891..2192282) /locus_tag="PA2004" /db_xref="GeneID:879959" CDS complement(2190891..2192282) /locus_tag="PA2004" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250694.1" /db_xref="GeneID:879959" /translation="MSVIIALAALGLLMLAAYRGYSVILFAPLAALGAVLLTDPSAVA PTFTGVFMEKMVGFIKLYFPVFLLGAVFGKLIELAGFSRSIVAAAIRLLGTRQAMLVI VLVCALLTYGGVSLFVVVFAVYPFAAEMFRQSDIPKRLIPATIALGAFSFTMDALPGT PQIQNIIPSTFFGTHAWAAPWLGTLGALFVFAVGMLYLRRQANKARRNGEGYGSDLRN EPETADDLRLPNPWLALSPLVLVGVANLLFTHWIPQWYGQVHTLQLAGMATPLQTEVG KLTAIWAVQAALLLGILLVLASGFAAIRSRLAEGTRSAVAGSLLAAMNTASEYGFGAV IASLPGFLVLADALKSIPNPLVNEAITVTLLAGITGSASGGMSIALAAMSDTFIAAAN AAQIPLEVLHRVAAMASGGMDTLPHNGAVITLLAVTGLTHREAYKVIFGITLIKTLAV FFVIGLFYATGLV" misc_feature complement(2190906..2192225) /locus_tag="PA2004" /note="H+/gluconate symporter GntT or related permease, GntP/DsdX family [Carbohydrate transport and metabolism]; Region: GntT; COG2610" /db_xref="CDD:442022" gene complement(2192544..2193989) /locus_tag="PA2005" /db_xref="GeneID:879178" CDS complement(2192544..2193989) /locus_tag="PA2005" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250695.1" /db_xref="GeneID:879178" /translation="MNDADSLQDYQRVRQQAIRSLFEIVEGSSEGTVIVDREARIVWI NQRYAQRFGLADPAQAIGRPCESVIPGSLLREVVGSGKPILLDMMDSAKDPLVVMRLP IHDDAGEVIGAIGFALLDELRSLSPLVTRYLSMQRELASTRSQLQARQAKYSFSHFVG TSPVSLEVKRRARRGAASEAPVLLLGETGTGKELLAHAIHSASPRAHKAFVSVNAAAI PESLLEAEFFGTAPGAFTGAERKGRPGKLQVAQGGTLFLDEIGDMPLALQGKLLRVLQ EKEFEAVGSNEVIRSDIRLVAATSIDLQQAMREGRFRADLYYRLNVLPIEIPPLRQRL DDLPALCESILDSLDHGRLHELGGDALALLARHAWPGNVRELRNVLERALLLADQRLL DAAALGAALGPLQPLPELPRAADDRPVGDFQQAREAFERDLIGRALAQSAGNVVEAAK RLGLGRSTLYKKIVALGMRLDSGTRLEIETN" misc_feature complement(2192583..2193947) /locus_tag="PA2005" /note="RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:443041" gene complement(2194058..2195410) /locus_tag="PA2006" /db_xref="GeneID:878919" CDS complement(2194058..2195410) /locus_tag="PA2006" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_250696.1" /db_xref="GeneID:878919" /translation="MHNQIASFRAALDARPVSRYQWLLLLLLALLLVTDGYDAQVLGY VVPTLAQEWGLDKAAFGPVFSANLFGLTVGSLLVTPLADRFGIRRVLLCCVLIYASLT VLMVFAGSLESLMLARFVCGIGMGGAMPSAMALMAEYSPPRLRTLMVTLAACGFSFGG AAGGFVAAAFMDGFGWQAVFLAGGVTPLLLFPFLLLFLPESLPRLLRDAPPYARLRQL SERMAPGWQPPPAEADAEPAASLTVLELFRHGYARPTLLLWATFFVSLILLYFMVSWL PSLLQESGLTRNAANLATSMFLFAGTLGAMLLAWLADRLRSKVRLLAAILAGAALFTL LLGLNHDQPRWLLAFVFAAGFCIIGGQLTLNAFASNFYPAQVRATGTGWALGVGRFGS ILGPLFGSLLLGMHISVENIFMLAAIPAGLAALLILQVRSPAAQAQRESAAALAVEES " misc_feature complement(2194109..2195314) /locus_tag="PA2006" /note="4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; Region: MFS_PcaK_like; cd17365" /db_xref="CDD:340923" misc_feature complement(order(2194235..2194237,2194244..2194249, 2194256..2194261,2194268..2194270,2194316..2194318, 2194328..2194330,2194340..2194345,2194496..2194498, 2194508..2194510,2194589..2194591,2194598..2194606, 2194613..2194618,2194625..2194627,2194931..2194933, 2194940..2194945,2194952..2194954,2195012..2195014, 2195021..2195029,2195033..2195038,2195186..2195188, 2195282..2195284,2195291..2195296,2195303..2195308)) /locus_tag="PA2006" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340923" gene complement(2195494..2196132) /gene="maiA" /locus_tag="PA2007" /db_xref="GeneID:879853" CDS complement(2195494..2196132) /gene="maiA" /locus_tag="PA2007" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="maleylacetoacetate isomerase" /protein_id="NP_250697.1" /db_xref="GeneID:879853" /translation="MKLYTYYRSTSSYRVRIALALKGLDYQSLPVNLIRDGGEHRQPA YLALNPQGRVPALQVDEGELLIQSPAIIEYLEERYPQPALLSSDPLRRARERGVAALV GCDIHPLHNASVLNLLRQWGHDEEQVRQWIGHWVGQGLAAVEQLIGDQGWCFGDRPGL ADVYLVPQLYAAERFGVALDAWPRIRRVADLAAAHPAFRQAHPANQPDTPAA" misc_feature complement(2195503..2196129) /gene="maiA" /locus_tag="PA2007" /note="maleylacetoacetate isomerase; Region: maiA; TIGR01262" /db_xref="CDD:273527" gene complement(2196129..2197427) /gene="fahA" /locus_tag="PA2008" /db_xref="GeneID:878748" CDS complement(2196129..2197427) /gene="fahA" /locus_tag="PA2008" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="fumarylacetoacetase" /protein_id="NP_250698.1" /db_xref="GeneID:878748" /translation="MNQPTPTRSWVASANGHADFPLQNLPLGIFSRAGLSPRCGVAIG DSILDLDAALAAGLFEGAAGEAAEATRGGALNAFFALGKPARVALRQRLLELLGEGAA ERPELLHPAAECQMHLPARIGDYTDFYVGIRHAENVGKLFRPDNPLLPNYKHVPIGYH GRASTVRVSGSEVRRPNGQTLPAGASEPVFGPCARLDYELELGIWIGQGNALGEAIPV SRAAEHIAGFCLLNDWSARDIQAWEYQPLGPFLSKSFITSVSPWVVTAEALEPFRRAQ PARPEGDPRPLPYLYDDNDQAHGAFDIELEVLLLTEGLREKGLPPQRLTLSNSLSMYW TVAQMVAHHSVNGCQLQPGDLFGSGTLSGAEPGQFGSLLEITAGGKQPVQLASGETRR FLEDGDEVILRARCKREGHVSIGFGECRGKVLAALPGARG" misc_feature complement(2196147..2197403) /gene="fahA" /locus_tag="PA2008" /note="fumarylacetoacetase; Region: fum_ac_acetase; TIGR01266" /db_xref="CDD:162276" gene complement(2197432..2198730) /gene="hmgA" /locus_tag="PA2009" /db_xref="GeneID:877745" CDS complement(2197432..2198730) /gene="hmgA" /locus_tag="PA2009" /EC_number="1.13.11.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="homogentisate 1,2-dioxygenase" /protein_id="NP_250699.1" /db_xref="GeneID:877745" /translation="MNLDSTALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYAE LLSGTAFTMARSEARRTWLYRITPSAKHPPFRRLERQIAGAELDAPTPNRLRWDPLAL PEQPTDFLDGLLRMAANAPGDKPAGVSIYQYLANRSMERCFYDADGELLLVPQLGRLR LCTELGALQVEPLEIAVIPRGMKFRVELLDGEARGYIAENHGAPLRLPDLGPIGSNGL ANPRDFLTPVARYEDSRQPLQLVQKYLGELWACELDHSPLDVVAWHGNNVPYKYDLRR FNTIGTVSFDHPDPSIFTVLTSPTSVPGLANIDFVIFPPRWMVAENTFRPPWFHRNLM NEFMGLIQGAYDAKAGGFVPGGASLHSCMSAHGPDAESCDKAIAADLKPHRIDQTMAF MFETSQVLRPSRAALETPALQNDYDACWASLVSTFNPQRR" misc_feature complement(2197450..2198712) /gene="hmgA" /locus_tag="PA2009" /note="RmlC-like cupin superfamily; Region: cupin_RmlC-like; cl40423" /db_xref="CDD:477354" gene 2198891..2199694 /locus_tag="PA2010" /db_xref="GeneID:879546" CDS 2198891..2199694 /locus_tag="PA2010" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250700.1" /db_xref="GeneID:879546" /translation="MEKNSSPAETSGKQKVRSAEVGTDILKALAELSPATSLSRLAEH VGMPASKVHRYLQALIASGFAVQDASTNHYSLGREALRVGLAALDSMDVLKSAAAPLA ELRDVLNETCFLAVWGNRGATVVQVEQAVRAVTVVTQVGSVLPLLGSSTGLVFAAFLP EREVAELREEELAGRADHPLADPAAYAVLLEGIRARGLHAIHGLLMPGVEALSAPVFD ARGRVAAVLTVVGPASIFQAEEQGPAAERLLATTRAISWRMGYDGTQGG" misc_feature 2198924..2199679 /locus_tag="PA2010" /note="DNA-binding transcriptional regulator, IclR family [Transcription]; Region: IclR; COG1414" /db_xref="CDD:441024" gene complement(2199762..2200664) /gene="liuE" /locus_tag="PA2011" /db_xref="GeneID:878857" CDS complement(2199762..2200664) /gene="liuE" /locus_tag="PA2011" /EC_number="4.1.3.4" /EC_number="4.1.3.26" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy- methylglutaryl-CoA lyase" /protein_id="NP_250701.1" /db_xref="GeneID:878857" /translation="MNLPKKVRLVEVGPRDGLQNEKQPIEVADKIRLVDDLSAAGLDY IEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALAPNLKGFEAALESGVKEVAVFA AASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVA WVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALAN IYASLLEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNGLEIHTGVDMHALVDA GQRICAVLGKSNGSRAAKALLAKA" misc_feature complement(2199798..2200658) /gene="liuE" /locus_tag="PA2011" /note="hydroxymethylglutaryl-CoA lyase; Provisional; Region: PRK05692" /db_xref="CDD:180206" misc_feature complement(order(2199918..2199920,2200038..2200040, 2200044..2200046,2200362..2200364,2200512..2200514, 2200518..2200520,2200608..2200610,2200617..2200622)) /gene="liuE" /locus_tag="PA2011" /note="active site" /db_xref="CDD:163676" misc_feature complement(order(2200527..2200529,2200617..2200622)) /gene="liuE" /locus_tag="PA2011" /note="catalytic residues [active]" /db_xref="CDD:163676" misc_feature complement(order(2199918..2199920,2200038..2200040, 2200044..2200046,2200617..2200619)) /gene="liuE" /locus_tag="PA2011" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163676" gene complement(2200685..2202652) /gene="liuD" /locus_tag="PA2012" /db_xref="GeneID:879012" CDS complement(2200685..2202652) /gene="liuD" /locus_tag="PA2012" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="methylcrotonyl-CoA carboxylase subunit alpha" /protein_id="NP_250702.1" /db_xref="GeneID:879012" /translation="MNPDYRSIQRLLVANRGEIACRVMRSARALGIGSVAVHSDIDRH ARHVAEADIAVDLGGAKPADSYLRGDRIIAAALASGAQAIHPGYGFLSENADFARACE EAGLLFLGPPAAAIDAMGSKSAAKALMEEAGVPLVPGYHGEAQDLETFRREAGRIGYP VLLKAAAGGGGKGMKVVEREAELAEALSSAQREAKAAFGDARMLVEKYLLKPRHVEIQ VFADRHGHCLYLNERDCSIQRRHQKVVEEAPAPGLGAELRRAMGEAAVRAAQAIGYVG AGTVEFLLDERGQFFFMEMNTRLQVEHPVTEAITGLDLVAWQIRVARGEALPLTQEQV PLNGHAIEVRLYAEDPEGDFLPASGRLMLYREAAAGPGRRVDSGVREGDEVSPFYDPM LAKLIAWGETREEARQRLLAMLAETSVGGLRTNLAFLRRILGHPAFAAAELDTGFIAR HQDDLLPAPQALPEHFWQAAAEAWLQSEPGHRRDDDPHSPWSRNDGWRSALARESDLM LRCRDERRCVRLRHASPSQYRLDGDDLVSRVDGVTRRSAALRRGRQLFLEWEGELLAI EAVDPIAEAEAAHAHQGGLSAPMNGSIVRVLVEPGQTVEAGATLVVLEAMKMEHSIRA PHAGVVKALYCSEGELVEEGTPLVELDENQA" misc_feature complement(2201240..2202631) /gene="liuD" /locus_tag="PA2012" /note="Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism]; Region: PccA; COG4770" /db_xref="CDD:443802" misc_feature complement(2200703..2200900) /gene="liuD" /locus_tag="PA2012" /note="The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase; Region: biotinyl_domain; cd06850" /db_xref="CDD:133459" misc_feature complement(order(2200778..2200780,2200799..2200807, 2200832..2200834)) /gene="liuD" /locus_tag="PA2012" /note="carboxyltransferase (CT) interaction site [active]" /db_xref="CDD:133459" misc_feature complement(2200802..2200804) /gene="liuD" /locus_tag="PA2012" /note="biotinylation site [posttranslational modification]; other site" /db_xref="CDD:133459" gene complement(2202649..2203446) /gene="liuC" /locus_tag="PA2013" /db_xref="GeneID:879128" CDS complement(2202649..2203446) /gene="liuC" /locus_tag="PA2013" /note="'class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene'" /codon_start=1 /transl_table=11 /product="gamma-carboxygeranoyl-CoA hydratase" /protein_id="NP_250703.1" /db_xref="GeneID:879128" /translation="MSEFQTIQLEIDPRGVATLWLDRAEKNNAFNAVVIDELLQAIDR VGSDPQVRLLVLRGRGRHFCGGADLAWMQQSVDLDYQGNLADAQRIAELMTHLYNLPK PTLAVVQGAVFGGGVGLVSCCDMAIGSDDATFCLSEVRIGLIPATIAPFVVKAIGQRA ARRYSLTAERFDGRRASELGLLSESCPAAELESQAEAWIANLLQNSPRALVACKALYH EVEAAELSPALRRYTEAAIARIRISPEGQEGLRAFLEKRTPAWRNDA" misc_feature complement(2202652..2203446) /gene="liuC" /locus_tag="PA2013" /note="gamma-carboxygeranoyl-CoA hydratase; Validated; Region: PRK05674" /db_xref="CDD:168168" misc_feature complement(order(2203024..2203026,2203033..2203038, 2203102..2203110,2203114..2203116,2203240..2203254, 2203264..2203266,2203360..2203362,2203366..2203368)) /gene="liuC" /locus_tag="PA2013" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(2203102..2203104,2203246..2203248)) /gene="liuC" /locus_tag="PA2013" /note="oxyanion hole (OAH) forming residues [active]" /db_xref="CDD:119339" misc_feature complement(order(2202841..2202846,2202853..2202855, 2202898..2202900,2202907..2202909,2202940..2202942, 2202949..2202954,2202958..2202963,2202967..2202972, 2202985..2202990,2202994..2203002,2203006..2203008, 2203021..2203032,2203066..2203077,2203138..2203140, 2203162..2203164)) /gene="liuC" /locus_tag="PA2013" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene complement(2203460..2205067) /gene="liuB" /locus_tag="PA2014" /db_xref="GeneID:878244" CDS complement(2203460..2205067) /gene="liuB" /locus_tag="PA2014" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="methylcrotonyl-CoA carboxylase subunit beta" /protein_id="NP_250704.1" /db_xref="GeneID:878244" /translation="MAILHTQINPRSAEFAANAATMLEQVNALRTLLGRIHEGGGSAA QARHSARGKLLVRERINRLLDPGSPFLELSALAAHEVYGEEVAAAGIVAGIGRVEGVE CMIVGNDATVKGGTYYPLTVKKHLRAQAIALENRLPCIYLVDSGGANLPRQDEVFPDR EHFGRIFFNQANMSARGIPQIAVVMGSCTAGGAYVPAMSDETVMVREQATIFLAGPPL VKAATGEVVSAEELGGADVHCKVSGVADHYAEDDDHALAIARRCVANLNWRKQGQLQC RAPRAPLYPAEELYGVIPADSKQPYDVREVIARLVDGSEFDEFKALFGTTLVCGFAHL HGYPIAILANNGILFAEAAQKGAHFIELACQRGIPLLFLQNITGFMVGQKYEAGGIAK HGAKLVTAVACARVPKFTVLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGVMGGEQA AGVLAQVKREQAERAGQQLGVEEEAKIKAPILEQYEHQGHPYYSSARLWDDGVIDPAQ TREVLALALSAALNAPIEPTAFGVFRM" misc_feature complement(2203463..2205061) /gene="liuB" /locus_tag="PA2014" /note="Carboxyl transferase domain; Region: Carboxyl_trans; cl47203" /db_xref="CDD:481543" gene complement(2205190..2206353) /gene="liuA" /locus_tag="PA2015" /db_xref="GeneID:879167" CDS complement(2205190..2206353) /gene="liuA" /locus_tag="PA2015" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="isovaleryl-CoA dehydrogenase" /protein_id="NP_250705.1" /db_xref="GeneID:879167" /translation="MTYPSLNFALGETIDMLRDQVRGFVAAELQPRAAQIDQDNQFPM DMWRKFGEMGLLGITVDEEYGGSALGYLAHAVVMEEISRASASVALSYGAHSNLCVNQ IKRNGNAEQKARYLPALVSGEHIGALAMSEPNAGSDVVSMKLRADRVGDRFVLNGSKM WITNGPDAHTYVIYAKTDADKGAHGITAFIVERDWKGFSRGPKLDKLGMRGSNTCELI FQDVEVPEENVLGAVNGGVKVLMSGLDYERVVLSGGPVGIMQACMDVVVPYIHDRRQF GQSIGEFQLVQGKVADMYTALNASRAYLYAVAAACDRGETTRKDAAGVILYSAERATQ MALDAIQILGGNGYINEFPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR" misc_feature complement(2205202..2206329) /gene="liuA" /locus_tag="PA2015" /note="Isovaleryl-CoA dehydrogenase; Region: IVD; cd01156" /db_xref="CDD:173845" misc_feature complement(order(2205247..2205255,2205262..2205267, 2205601..2205603,2205610..2205612,2205619..2205621, 2205640..2205642,2205802..2205804,2205865..2205867, 2205943..2205945,2206060..2206062,2206072..2206074, 2206084..2206086)) /gene="liuA" /locus_tag="PA2015" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:173845" misc_feature complement(order(2205238..2205240,2205244..2205246, 2205865..2205867,2205871..2205873,2205943..2205948, 2205961..2205966,2205970..2205972)) /gene="liuA" /locus_tag="PA2015" /note="FAD binding site [chemical binding]; other site" /db_xref="CDD:173845" misc_feature complement(2205613..2205615) /gene="liuA" /locus_tag="PA2015" /note="catalytic base [active]" /db_xref="CDD:173845" gene complement(2206402..2206806) /gene="liuR" /locus_tag="PA2016" /db_xref="GeneID:878723" CDS complement(2206402..2206806) /gene="liuR" /locus_tag="PA2016" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="liu genes regulator" /protein_id="NP_250706.1" /db_xref="GeneID:878723" /translation="MSITYTISDLARELDITTRAIRFYEEQGLLSPERRGQERIYSPR DKVSLKLILRGKRIGFSLAECRELIELYDPDPSSGNQKQLNTMLEKIAERRAQLEQQL LDIEQMQLELDTAEERCRAALIKSYNKHTVET" misc_feature complement(2206438..2206794) /gene="liuR" /locus_tag="PA2016" /note="Helix-Turn-Helix DNA binding domain of the regulatory protein GnyR; Region: HTH_GnyR; cd04776" /db_xref="CDD:133403" misc_feature complement(order(2206687..2206695,2206741..2206743, 2206783..2206791)) /gene="liuR" /locus_tag="PA2016" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133403" misc_feature complement(order(2206480..2206485,2206492..2206494, 2206504..2206506,2206522..2206524,2206534..2206536, 2206603..2206605,2206630..2206635,2206645..2206647, 2206654..2206656)) /gene="liuR" /locus_tag="PA2016" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:133403" gene 2206999..2207928 /locus_tag="PA2017" /db_xref="GeneID:878787" CDS 2206999..2207928 /locus_tag="PA2017" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250707.1" /db_xref="GeneID:878787" /translation="MSRLMTYRTLLACLLAALLALLVAGQQQRAFERIWFKLEQRYGG DVARENALRLADYRVDIEARVLGAESNVSALSFDPSRRSLVSVTNQDPHFLELSLDGE LLRRIPLRGFQDPEAIEYIRPGVYVVAEERRQRLVEIHVDADTRVIDIDDPRNARKFS LGSANKRNKGFEGLAYDPLRERLFVAREKAPVGIIEVNGFFNDRGEALDLSVGGDPQR DRGLFLTDLSSLYYDKASDHLLVLSDESRVVIELDRAGDPLGSLTLRGGNHGLTDDVP QAEGLAMDDRGSLYVVSEPNLFYRFSRALPAAD" misc_feature 2207143..2207904 /locus_tag="PA2017" /note="Region: SdiA-regulated; pfam06977" /db_xref="CDD:429226" misc_feature order(2207215..2207217,2207263..2207265,2207338..2207340, 2207344..2207346,2207512..2207514,2207680..2207682, 2207833..2207835,2207878..2207880) /locus_tag="PA2017" /note="putative active site [active]" /db_xref="CDD:197380" gene complement(2208169..2211306) /locus_tag="PA2018" /db_xref="GeneID:878882" CDS complement(2208169..2211306) /locus_tag="PA2018" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="multidrug efflux protein" /protein_id="NP_250708.1" /db_xref="GeneID:878882" /translation="MARFFIDRPVFAWVISLLIVLAGVLAIRFLPVAQYPDIAPPVVN VSASYPGASAKVVEEAVTAIIEREMNGAPGLLYTKATSSTGQASLTLTFRQGVNADLA AVEVQNRLKIVESRLPESVRRDGIYVEKAADSIQLIVTLTSSSGRYDAMELGEIASSN VLQALRRVEGVGKVETWGAEYAMRIWPDPAKLTSMNLSASDLVNAVRRHNARLTVGDI GNLGVPDSAPISATVKVDDTLVTPEQFGEIPLRIRADGGAIRLRDVARVEFGQSEYGF VSRVNQMTATGLAVKMAPGSNAVATAKRIRATLDELSRYFPEGVSYNIPYDTSAFVEI SIRKVVSTLLEAMLLVFAVMYLFMQNFRATLIPTLVVPVALLGTFTVMLGLGFSINVL TMFGMVLAIGILVDDAIIVVENVERLMAEEGLSPHDATVKAMRQISGAIVGITVVLVS VFVPMAFFSGAVGNIYRQFAVTLAVSIGFSAFLALSLTPALCATLLRPIDADHHEKRG FFGWFNRAFLRLTGRYRNAVAGILARPIRWMLVYTLVIGVVALLFVRLPQAFLPEEDQ GDFMIMVMQPEGTPMAETMANVGDVERYLAEHEPVAYAYAVGGFSLYGDGTSSAMIFA TLKDWSERREASQHVGAIVERINQRFAGLPNRTVYAMNSPPLPDLGSTSGFDFRLQDR GGVGYEALVKARDQLLARAAEDPRLANVMFAGQGEAPQIRLDIDRRKAETLGVSMDEI NTTLAVMFGSDYIGDFMHGSQVRKVVVQADGAKRLGIDDIGRLHVRNEQGEMVPLATF AKAAWTLGPPQLTRYNGYPSFNLEGQAAPGYSSGEAMQAMEQLMQGLPEGIAHEWSGQ SFEERLSGAQAPALFALSVLIVFLALAALYESWSIPLAVILVVPLGVLGALLGVSLRG LPNDIYFKVGLITIIGLSAKNAILIIEVAKDHYQEGMSLLQATLEAARLRLRPIVMTS LAFGFGVVPLALSSGAGSGAQVAIGTGVLGGIVTATVLAVFLVPLFFLVVGRLFRLRK APRTGNSPQIPTEQA" misc_feature complement(2208211..2211306) /locus_tag="PA2018" /note="multidrug efflux RND transporter permease subunit; Region: PRK09577" /db_xref="CDD:169981" gene complement(2211322..2212512) /locus_tag="PA2019" /db_xref="GeneID:878839" CDS complement(2211322..2212512) /locus_tag="PA2019" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="multidrug efflux lipoprotein" /protein_id="NP_250709.1" /db_xref="GeneID:878839" /translation="MHIQWTGSLRGLLAALVALFLLGCEEAADAGKTAEAPAEVGVIV ARPAPIGITSELPGRLEAYRQAEVRARVAGIVTRRLYEEGQDVRAGTVLFQIDPAPLK AALDISRGALARAEASHAAAADKLKRYADLIKDRAISEREYTEAQTDARQALAQIASA KAELEQARLRLGYATVTAPIDGRARRALVTEGALVGEDSPTPLTRVEQIDPIYVNFSQ PAGEVAAMQRAIREGQVKGVADKDIAVRLVLADGSEYPLAGELLFSDLAVDPGTDTIA MRALFRNPHRELLPGGYVQVRLQRAVNPQAITVPRDALIRTAQSAVVKVVNPKGLVED VEVRADTLQGRDWIISRGLKGGEWVIVENAAQHAAGSSVQAVVRQPASADAPSPLAAS PAGQ" misc_feature complement(2211352..2212506) /locus_tag="PA2019" /note="MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit; Region: PRK09578" /db_xref="CDD:169982" gene 2212677..2213309 /locus_tag="PA2020" /db_xref="GeneID:880025" CDS 2212677..2213309 /locus_tag="PA2020" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250710.1" /db_xref="GeneID:880025" /translation="MARKTKEESQKTRDGILDAAERVFLEKGVGTTAMADLADAAGVS RGAVYGHYKNKIEVCLAMCDRAFGQIEVPDENARVPALDILLRAGMGFLRQCCEPGSV QRVLEILYLKCERSDENEPLLRRRELLEKQGQRFGLRQIRRAVERGELPARLDVELAS IYLQSLWDGICGTLAWTERLRDDPWNRAERMFRAGLDSLRSSPYLLLADA" misc_feature 2212677..2213186 /locus_tag="PA2020" /note="DNA-binding transcriptional regulator EnvR; Provisional; Region: PRK09975" /db_xref="CDD:182177" gene complement(2213315..2213539) /locus_tag="PA2021" /db_xref="GeneID:879997" CDS complement(2213315..2213539) /locus_tag="PA2021" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250711.1" /db_xref="GeneID:879997" /translation="MSIEIDSEQGVCSVEIEGSRHRAPVDSLRIGTDAEARLSVLYID GKRLHISEEDAQRLVVAGAEDQRRHLMADD" misc_feature complement(2213318..2213539) /locus_tag="PA2021" /note="Protein of unknown function (DUF3203); Region: DUF3203; pfam11462" /db_xref="CDD:431896" gene 2213693..2215054 /locus_tag="PA2022" /db_xref="GeneID:879866" CDS 2213693..2215054 /locus_tag="PA2022" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="UDP-glucose 6-dehydrogenase" /protein_id="NP_250712.1" /db_xref="GeneID:879866" /translation="MRLCVIGAGYVGLVTAACFAEMGNQVRCVERDRERVARLRRGEM PIYEPGLESILRDQLDAARLTFTASLAEGLADAEVVFIAVGTPCGEDGSADLSHVLAV AEQLGAQLRQACIVVNKSTVPVGTAERVEEIIRLGLARRRKRFRVAVASNPEFLKEGS AVDDFRRPDRVIIGSAETQAGETLRQLYAPFLRNHERVLLMGRREAEFSKYAANAFLA TKISFMNEMAGLCALTGVDIEDVRRGMGSDKRIGTHFIYAGCGYGGSCFPKDVRALIR SAEQQGYDSQILRAVEARNARQKELLFETLGELFQGRWQGRTVALWGLAFKPGTDDLR EAPSLVLLEALLRHGVRVRAHDPVANAGVAARYPEAVACARLTLHDSPYAAVEGADAL VLVTEWKQFRQPDFQKIRGSMRTPLLVDGRNLYAPARMAELGFIYQGIGRPRAGHCKA SAA" misc_feature 2213693..2215021 /locus_tag="PA2022" /note="UDP-glucose 6-dehydrogenase [Cell wall/membrane/envelope biogenesis]; Region: Ugd; COG1004" /db_xref="CDD:440628" gene 2215102..2215941 /gene="galU" /locus_tag="PA2023" /db_xref="GeneID:879968" CDS 2215102..2215941 /gene="galU" /locus_tag="PA2023" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="UTP-glucose-1-phosphate uridylyltransferase" /protein_id="NP_250713.1" /db_xref="GeneID:879968" /translation="MIKKCLFPAAGYGTRFLPATKAMPKEMLPVVNKPLIQYAVEEAL EAGLSEIGIVTGRGKRSLEDHFDISYELEHQIRNTDKEKYLVGIRRLIDECTFAYTRQ VEMKGLGHAILTGRPLIGDEPFAVVLADDLCLNLEGDSVLKQMVKLYNQFRCSIVAIQ EVPPEETNKYGVIAGEMIRDDIFRVNTMVEKPKPEEAPSNLAIIGRYILTPDIFDLIE QTEPGKGGEIQITDALMKQAQDGCVLAYKFKGKRFDCGSAEGYIEATNFCYENLYKTG KAH" misc_feature 2215102..2215896 /gene="galU" /locus_tag="PA2023" /note="UTP-glucose-1-phosphate uridylyltransferase [Cell wall/membrane/envelope biogenesis]; Region: GalU; COG1210" /db_xref="CDD:440823" gene complement(2216121..2216543) /locus_tag="PA2024" /db_xref="GeneID:878003" CDS complement(2216121..2216543) /locus_tag="PA2024" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ring-cleaving dioxygenase" /protein_id="NP_250714.1" /db_xref="GeneID:878003" /translation="MSPTLTHLALHVPDLDACIAFYETFCGMRVIHRRPGKGSQIVWM AEPGQEQRFIFVIMPGGQPRNLASDDYSHFGFALSSRAAVDDLARRAEAAGCLVWAPR DEPYPVGYYCGLRDPAGNYVEFSYGQPLGPGSEALPIP" misc_feature complement(2216172..2216525) /locus_tag="PA2024" /note="vicinal oxygen chelate (VOC) family; Region: VOC; cd06587" /db_xref="CDD:319898" gene 2216688..2218043 /gene="gor" /locus_tag="PA2025" /db_xref="GeneID:878570" CDS 2216688..2218043 /gene="gor" /locus_tag="PA2025" /EC_number="1.8.1.7" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glutathione reductase" /protein_id="NP_250715.1" /db_xref="GeneID:878570" /translation="MSFDFDLFVIGAGSGGVRAARFAAGFGARVAVAESRYLGGTCVN VGCVPKKLLVYGAHFSEDFEQARAYGWSAGEAQFDWATLIGNKNREIQRLNGIYRNLL VNSGVTLLEGHARLLDAHSVEVDGQRFSAKHILVATGGWPQVPDIPGKEHAITSNEAF FLERLPRRVLVVGGGYIAVEFASIFNGLGAETTLLYRRDLFLRGFDRSVREHLRDELG KKGLDLQFNSDIARIDKQADGSLAATLKDGRVLEADCVFYATGRRPMLDDLGLENTAV KLTDKGFIAVDEHYQTSEPSILALGDVIGRVQLTPVALAEGMAVARRLFKPEEYRPVD YKLIPTAVFSLPNIGTVGLTEEEALSAGHKVKIFESRFRPMKLTLTDDQEKTLMKLVV DAHDDRVLGCHMVGAEAGEILQGIAVAMKAGATKQAFDETIGIHPTAAEEFVTLRTPT R" misc_feature 2216688..2218028 /gene="gor" /locus_tag="PA2025" /note="glutathione reductase; Validated; Region: PRK06116" /db_xref="CDD:235701" gene complement(2218098..2219099) /locus_tag="PA2026" /db_xref="GeneID:877995" CDS complement(2218098..2219099) /locus_tag="PA2026" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250716.1" /db_xref="GeneID:877995" /translation="MSRPRFLPDNFTLALIATVLLATFLPCSGQTAVVFEWVTNIGIG LLFFLHGAKLSRQAIIAGMTHWRLHLLVFACTFVMFPLLGLALKPALSPMVTPELYLG ILFLCALPATVQSSIAFTSLARGNVPAAVCSASVSSLLGVFLTPLLVKLLLGAEGETG NALDAIGKITLQLLVPFIAGQVLRRWIGAWVERNKPVLRYVDQGSILLVVYTAFSAAV IQGLWHEVPWLALLGLTVACCVILALALVLTTVLARRLGFSKEDEITIVFCGSKKSLA TGVPMAKVLFATSAVGPMVLPLMLFHQIQLMVCAVLAQRYARRRDDAAAALAEAPSR" misc_feature complement(2218158..2219075) /locus_tag="PA2026" /note="SBF-like CPA transporter family (DUF4137); Region: SBF_like; pfam13593" /db_xref="CDD:433336" gene complement(2219253..2219645) /locus_tag="PA2027" /db_xref="GeneID:878062" CDS complement(2219253..2219645) /locus_tag="PA2027" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250717.1" /db_xref="GeneID:878062" /translation="MSTLAPLFLAKHPDGEERQVIRPNVWETSCADTETLSIFHIEGM ADPDLLCRVLNLFAVQSFTPERVRADREDHKIRLLLTFPGLSQHRASVIAEKLRSLVT VLAVRLEFSPHAGKVRPSVSEPLLASVV" gene 2219778..2220251 /locus_tag="PA2028" /db_xref="GeneID:878562" CDS 2219778..2220251 /locus_tag="PA2028" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250718.1" /db_xref="GeneID:878562" /translation="MSIPLDIYDQRILALLQEESSLSTAEIAERIGLSQSPCWRRIQR LKEEGVIRKQVTLLDRKKIGLNTQVFAQIKLNAHGRKNLTDFAEAMHQFPEVLECHVL MGAVDFMLRIVTRDIESYERFFFEKLSAVPGIQEVNSIVALSEIKSTTTLPLLAP" misc_feature 2219784..2220206 /locus_tag="PA2028" /note="DNA-binding transcriptional regulator, Lrp family [Transcription]; Region: Lrp; COG1522" /db_xref="CDD:441131" gene 2220275..2220574 /locus_tag="PA2029" /db_xref="GeneID:878543" CDS 2220275..2220574 /locus_tag="PA2029" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250719.1" /db_xref="GeneID:878543" /translation="MTISKTKSSFYRRLYVAYLIDSGTASVPEIMAATGMPRRTAQDT IAALEELDIVCEFEQREGARNHQGGYVIRDWGAVRREWVVEQHRRIAAALEYPAD" misc_feature 2220275..2220565 /locus_tag="PA2029" /note="Uncharacterized conserved protein [Function unknown]; Region: COG4519" /db_xref="CDD:443593" gene complement(2220649..2220906) /locus_tag="PA2030" /db_xref="GeneID:878004" CDS complement(2220649..2220906) /locus_tag="PA2030" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250720.1" /db_xref="GeneID:878004" /translation="MIRCRNCGERPASEGHICMVCKRRSDIDPYKALIAMALLVYCGV SLAAYLKPHMPAPPPTAGSSVQPAEELAQRARQATLEQRGI" gene complement(2220903..2221157) /locus_tag="PA2031" /db_xref="GeneID:878480" CDS complement(2220903..2221157) /locus_tag="PA2031" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250721.1" /db_xref="GeneID:878480" /translation="MTRLSAKSERRQRLDGPFPLAAMDNLAQALRRGYRLARQRQLTR RALLDLEAAELKDIGLSAEQAREEASLAFWQAGKSGGRKA" misc_feature complement(2220930..2221082) /locus_tag="PA2031" /note="Uncharacterized conserved protein YjiS, DUF1127 family [Function unknown]; Region: YjiS; COG5457" /db_xref="CDD:444208" gene 2221337..2222761 /locus_tag="PA2032" /db_xref="GeneID:878564" CDS 2221337..2222761 /locus_tag="PA2032" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250722.1" /db_xref="GeneID:878564" /translation="MTLYLQLAETLGSRIEQGLYRPGDRLPSVRAMSIEHGVSLSTVQ QAYRLLEDRGLAEPRPKSGYFVPAARQMPPLPAIARLAQRPVEISQWEQVLALVSTVP RPDVVQLGRGMPDISSPSLKPLTRSLARLNRHADARALAYDGIHGSPLLREEVARLLV DSGCRATASDVVITTGCHEALSVSIRAVCEPGDIVAVESPSFHGAMQSLKGLGMKALE IPTDPVNGISLEALELALEQWPIKAIQVTPNCNNPLGYIMPESRKRALLALAQRYDVA IIEDDVYGDLAYTYPRPRTIKSYDDDGRVLLCGSFSKVLAPGLRIGWMVPGRYADRVL HMKYISTGASALQPQLAIAEFIGNGHYEPHLRRMRAQYQRGRDLMIDWVARYFPEGTR ASRPQGGFLLWVELDEAFDTLRLDKALRNRGVQVAVGCIFSASGKYRNCLRMNYAALP TPAIEQAVRRVGESACELLEPCEA" misc_feature 2221337..2222743 /locus_tag="PA2032" /note="DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; Region: ARO8; COG1167" /db_xref="CDD:440781" gene 2222896..2223804 /locus_tag="PA2033" /db_xref="GeneID:878556" CDS 2222896..2223804 /locus_tag="PA2033" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250723.1" /db_xref="GeneID:878556" /translation="MSQPAYRLFNVELKRREQLSPALTRFVFGGPEVAEMKTLAADQR IKIFFPDASGQPPSLPGGSEWYQAYRSVEPARRPPMRTYTIRALRAEQEEVDVEFVLH GENGPASAWATHARIGDRLQLAAPNRQYGDDPGGYEWKPPAGVRHILLIADETALPAV AGILEELAGETEPPVVEAFLEVPGEADILDLPAIPAARLHWLPRHQAGIHSRNGERMI EAARQARLPEREVAGGAAQELEDIDIDEEILWELASPESGSFYAWVAGESAAVMAIRR YLVQERGIDKRHLTLMGYWRLGKVFD" misc_feature 2222905..2223792 /locus_tag="PA2033" /note="NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains [Inorganic ion transport and metabolism]; Region: ViuB; COG2375" /db_xref="CDD:441942" gene 2223804..2224478 /locus_tag="PA2034" /db_xref="GeneID:878550" CDS 2223804..2224478 /locus_tag="PA2034" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250724.1" /db_xref="GeneID:878550" /translation="MGRFVGKQADGYETRIGRLLPGYELLHLLSRAQLLARLPERARL LSVGCGAGGELAELAGLRPGWRFVAADLSADMLALARQRCARLGLLERIELHCGDVAG LPPAPPCDAALVLLVLHFLRGDQAKRRFLEAVAERLAPAAPLLLANLMEARDAFERPV QAEACRLAGLSPEDSDGMLQRLREDFDPLSEQRLGELLEDTGFVLPSRYFQAVGYQAW IAFRAG" misc_feature 2223882..>2224214 /locus_tag="PA2034" /note="SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]; Region: SmtA; COG0500" /db_xref="CDD:440266" gene complement(2224486..2226144) /locus_tag="PA2035" /db_xref="GeneID:878145" CDS complement(2224486..2226144) /locus_tag="PA2035" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="thiamine pyrophosphate protein" /protein_id="NP_250725.1" /db_xref="GeneID:878145" /translation="MSDSLPQRNGGQILVEALRRNAVDTVYCIPGESYLPVLDALYDT DGIRTVVTRHEGAASNMADAYGKLTGRPGICFVTRGPGATHAANGVHTAQQDSTPMIL FVGQVESAFKGREAFQEVDYVQMFSGLAKWAVEIDRIERIPEIVGRAFSVATSGRPGP VVVALPEEILFGSAQVADAPEPRVLPGRPGATAMAELRELLANARRPLLVLGGSGWDS AARKRLGAFVEANGLPVATSFRRQDLFDNRDPHYAGQLGFGAAPALLERLRQADLLLV VGARLGETPSAGYSLVRSPAPAQTLIHVHPDSAELNRVYLARLPIQATPCAFAEALAD LAPLPSSTWQDWREAAHADYLAYSTPAASDPAVQGVDLASVVAYLSENLPDDAVIANG AGNYAVWVHRFYRYRQARTQLAPTNGAMGYGLPAAIAASLRDPQRSVVCFAGDGCFMM YPQELATAAQFGATPVVIVVNNGMLGTIRMHQEREYPGRVSATRLDNPDFVALARAFG AHAERVECSADFPAAFRRARESGRPALLELLTDPRQITPQARLA" misc_feature complement(2224489..2226144) /locus_tag="PA2035" /note="thiamine pyrophosphate protein; Validated; Region: PRK08199" /db_xref="CDD:181285" gene 2226879..2227400 /locus_tag="PA2036" /db_xref="GeneID:878533" CDS 2226879..2227400 /locus_tag="PA2036" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250726.1" /db_xref="GeneID:878533" /translation="MWFLGKMGFTYGSSHYRYEGFEGKVLEVGSGPIGFFEKVEGVTV TAQDSLMGLYAENLPFSILGERGSSCYIRDGVADIESAFDFVVCSNVLDHTADWIQFL VDCVGRLRTGGELLLVTDSRGVPAIGHTQIFSHDQLVRVLELLGAKQFKVKAVEREDG VHCDYRHYFRVVF" misc_feature 2226945..2227235 /locus_tag="PA2036" /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase [Coenzyme transport and metabolism]; Region: UbiG; COG2227" /db_xref="CDD:441829" gene 2227541..2229001 /locus_tag="PA2037" /db_xref="GeneID:878475" CDS 2227541..2229001 /locus_tag="PA2037" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250727.1" /db_xref="GeneID:878475" /translation="MKKSMISCLCFVLLLHFLLVSKVAAEVFCESCLQVRVERPLVVR GGSHEPGLDTKFYVIKLSENLFRGYSSGGGDAYAITGPEAWSMGWPANKVLSKGAAGS YSECGVWINSPVKIGDVYVAAVHQEQKCDYINGGQAHKSMGVSFSYDGLSWVNPITVL TSPEAPKMGTQSGEGDCSLVRAPDEGYLYMYCFRPGRWDNIVARAPEASYMFPSSWRK LYKGNWSEPAIGGMADSLGAIGSSVGYWRAGRKVIALDLDPWFGGIKLSLSSDYKNFF TLKDPLVPFVKNDWDRNLIGKSTDLIAYVGVVNLFGGGNRVDNSGWGITYTYIPHGGT LKEKYLVFQGVNMKVVSEPKQASVGLALTRWEHRSGKYRVTTLPVVRQSEYTERNRIA YLLTRPVVGIETLEVEECVNRQDPDDYLVTDAGGCDGSGHDRIATIGWVYKYPQKNTV PIYRCYSPLGENHFLSSNAGCDDLGSLEWKLGYGLK" gene complement(2229126..2229440) /locus_tag="PA2038" /db_xref="GeneID:878534" CDS complement(2229126..2229440) /locus_tag="PA2038" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250728.1" /db_xref="GeneID:878534" /translation="MVWAVIFGMGAIVFLNRYLFLEPRLPIRLGSNLRQFLGFAVPGM LTAICGPIVFMPEGRIDLGYDNPYLVSGAVTVALVLYTRNTLASMLLGMAFFFLFKWW LI" misc_feature complement(2229132..2229437) /locus_tag="PA2038" /note="Branched-chain amino acid transport protein [Amino acid transport and metabolism]; Region: AzlD2; COG4392" /db_xref="CDD:443518" gene complement(2229425..2230183) /locus_tag="PA2039" /db_xref="GeneID:878065" CDS complement(2229425..2230183) /locus_tag="PA2039" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250729.1" /db_xref="GeneID:878065" /translation="MRLLACWTDVHHRHAPMTAHDLPRQAFLRGAVAILPLSLAVAPW GLLAGSMAIEANLTPAEGQGLSAIVFAGAAQLVAIGMLKGGAGFFSIIFTTLLLTSQH LLYGMSLRPVLSPLPGRWRIGLGFLLTDEFFALASQHDRRNFNRWYALGVGLTFYIAW NLFTLAGILLGRSIPGLEHLGLDFSIAATFIALVAPLVRNVPTLVCVATSLFCSVLFS HWQWSSALVLAGLAGMAAGFICNKLYREAPWSGQ" misc_feature complement(2229443..2230105) /locus_tag="PA2039" /note="Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]; Region: AzlC; COG1296" /db_xref="CDD:440907" gene 2230689..2232065 /locus_tag="PA2040" /db_xref="GeneID:878105" CDS 2230689..2232065 /locus_tag="PA2040" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutamine synthetase" /protein_id="NP_250730.1" /db_xref="GeneID:878105" /translation="MSVPLRAVQLTEPSLFLQEHPEVQFVDLLISDMNGVVRGKRIER NSLPKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKR PTAQLLMTMHELEGEPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGR PQPPRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFE VNLHHVADPMKACDYAVLLKRLIKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDK HGNNIFTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWG LDNRTVALRVPTGSPDAVRLEHRVAGADANPYLLLASVLAGVHHGLTNKVEPGAPIEG NSYEQLEPSLPNNLRDALRELDDSEILAKYIDPKYIDIFVACKESELEEFEYSISDLE YNWYLHTV" misc_feature 2230743..2232056 /locus_tag="PA2040" /note="Glutamine synthetase [Amino acid transport and metabolism]; Region: GlnA; COG0174" /db_xref="CDD:439944" gene 2232222..2233592 /locus_tag="PA2041" /db_xref="GeneID:878455" CDS 2232222..2233592 /locus_tag="PA2041" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_250731.1" /db_xref="GeneID:878455" /translation="MSNPPPTAERTQLRKSLKLWQIVMIGLAYLTPMTVFDTFGIVSG ISQGHVPTAYLLALAGVLFTAISYGKLVRQFPTAGSAYTYAQRAINPHVGFMVGWSSL LDYLFLPMINALLAKIYLTALFPEVAPWIWVVMFVLIMTLINIKSVNLVANFNTVFVL VQLAIIVVFIGLVIHGLNNGEGTATVLSTQPFFSEHAHLSAMVAGATILCFSFLGFDA VTTLSEETRDAGRVIPRAIFLTALYGGVIFITVSYFLQSYFPTNVRFKEPDAALPEIA LYVGGKLFQSIFLCATFINTLASGLASQASVSRLLYVMGRDNVLPERIFGFVHPKWRT PSINVLIVGMVALSAISFDLVTATALINFGALVAFTFVNLSVIVHFYVRGGRNRSLKE HFHYLVLPLLGAAIVAVLWLNLESTSLVMGLIWAGLGFGYLFYLTRSFSRPPPRFQES ELSPTQ" misc_feature 2232240..2233547 /locus_tag="PA2041" /note="Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; Region: PotE; COG0531" /db_xref="CDD:440297" protein_bind complement(2233779..2233820) /experiment="Beta-gal reporter assay [PMID: 15175299]" /experiment="DNA-array expression analysis [PMID: 15175299]" /experiment="EMSA [PMID: 15175299]" /note="Transcription factor binding site for NP_249584.; Evidence of regulation for: PA2042" /bound_moiety="ArgR" gene 2234080..2235309 /locus_tag="PA2042" /db_xref="GeneID:878429" CDS 2234080..2235309 /locus_tag="PA2042" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="serine/threonine transporter SstT" /protein_id="NP_250732.1" /db_xref="GeneID:878429" /translation="MTYPERPLLHLLTRTSLVGQIIVGLIAGLLLASFFPAAALKVGF IGKVFVSALKAVAPVLVFVLVMASIANHKQGQQTHIRPILLLYLVGTFSAAVVAVIAS FAFPSSLVLASHPGEMSPPGGIAEVLQSLLLSVVDNPVNALISANFIGILAWAIGLGI AFRHASDTTRNLLSELSNGVSLIVKVVIRFAPLGIFGLVASTFAESGVEALKGYAHLL VVLLGCMLFVAFVVNPLIVFLKIRRNPYPLVLTCLRESGMTAFFTRSSAANIPVNLQL CERLGLHEDTYSVSIPLGATINMAGAAITITVLTLAAVHTLGIAVDVPTAILLSVVAS ICACGASGVAGGSLLLIPLACSLFGIPSEVAMQVVAVGFIIAILQDSAETALNSSTDV LFTAAACEAEERKASAA" misc_feature 2234095..2235297 /locus_tag="PA2042" /note="Na+/serine and Na+/threonine symporter SstT [Amino acid transport and metabolism]; Region: SstT; COG3633" /db_xref="CDD:442850" gene 2235430..2236332 /locus_tag="PA2043" /db_xref="GeneID:878432" CDS 2235430..2236332 /locus_tag="PA2043" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250733.1" /db_xref="GeneID:878432" /translation="MSSPSLPDASLRASTLHLPAGPWSTVLDCLCARFPAIDRDTWLA RMQRGRVLDAEGRALGPQAAYREGLRVHYFRELPVEAPIPFEARILYRDEHLLVADKP HFLPVMPAGGYVEQTLLARLARSTGNRDLVPLHRIDRHTAGLVLFSTNPGSRGRYQAL FRERRIDKCYEAIAPALPQLDFPLLRRTRLVPGEPFFRMREGEGEPNSETRIEVVERN GRWWRYRLYPVTGKKHQLRVHLAALGAGIQNDGFYPELLDAEGSPDDYLRPLKLLARG LCFDDPLSGERRMFESGLRLDWQV" misc_feature 2235574..2236317 /locus_tag="PA2043" /note="Pseudouridine synthase, a subgroup of the RluA family; Region: PSRA_1; cd02558" /db_xref="CDD:211332" misc_feature order(2235832..2235843,2236138..2236140) /locus_tag="PA2043" /note="probable active site [active]" /db_xref="CDD:211332" gene complement(2236492..2238366) /locus_tag="PA2044" /db_xref="GeneID:877614" CDS complement(2236492..2238366) /locus_tag="PA2044" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250734.1" /db_xref="GeneID:877614" /translation="MPRHPFSPSFLAASVFCAATPALAALQPIAEAPLAGETEFRCQF NADNSTDCVSTYSFTILKPSGREMLSRIDRSYAETDSLIVEKAELTQPGGKPVPLDQS QIDTRTAPNPDQGFLRERQTSLAFPNLRVGTRISYTLREHFTAKPLSTQFHYILSRPP MPVRDDRFVAEFKAERPIFVRSELMDAYRIEQSADKKTLKVSLKKPQYTNYINEAGNA YLRHTPRLELGSSLDLQDNFGPFAARYNEILAAELPKGAAAAVAAVKGKPAREQVAGL MQYINDTYRYLGDWRASERGYVPFSLAEIERNGYGDCKDLAILLAAMLKAAGIKAEPT LVSRGDVVWDLLVPGMYAPNHAIVRAEVDGKTWWLDPTNPVFAPGRIMPDIQQRWALV LGADGKVRRDEIPLEAPGDTLRVTRSEHYTHDGEARVESRVELSNAPLMQLSVADRQR GRTSTDQDLCRNFAKEGSDCVLERDDSQFVLPPSYTISARLTDRRALDRLGGEYFYNR QDLASQWDAFAKYRSEGQLAELYLGEPQITSYDISLSGGKTDEPAHSCEIRSPWFDID LQAEPAKDGGYHYRYREVQKTSWLNHDEINSAEFGKLIEQSRGCVEQLRLVVKLDKRP " misc_feature complement(2237845..2238228) /locus_tag="PA2044" /note="Domain of Unknown Function with PDB structure (DUF3857); Region: DUF3857; pfam12969" /db_xref="CDD:432907" misc_feature complement(2237251..>2237565) /locus_tag="PA2044" /note="Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]; Region: YebA; COG1305" /db_xref="CDD:440916" gene complement(2238541..2238801) /locus_tag="PA2045" /db_xref="GeneID:878102" CDS complement(2238541..2238801) /locus_tag="PA2045" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="membrane protein insertion efficiency factor" /protein_id="NP_250735.1" /db_xref="GeneID:878102" /translation="MKFLLIGLIRFYQYAISPLIGPRCRFYPSCSHYTLEAIRVHGAL RGGYLGARRLLRCHPWHPGGYDPVPERQEQACACHRTAKPGK" misc_feature complement(2238598..2238801) /locus_tag="PA2045" /note="Membrane-anchored protein YidD, putatitve component of membrane protein insertase Oxa1/YidC/SpoIIIJ [Cell wall/membrane/envelope biogenesis]; Region: YidD; COG0759" /db_xref="CDD:440522" gene complement(2238860..2240214) /locus_tag="PA2046" /pseudogene="unknown" /db_xref="GeneID:878090" gene complement(2240302..2241291) /locus_tag="PA2047" /db_xref="GeneID:877874" CDS complement(2240302..2241291) /locus_tag="PA2047" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250737.1" /db_xref="GeneID:877874" /translation="MPVAATRASLGKVSPASPRMSENTPLLSVDLPAELRQRQSELAQ SLLRHCPRDGIYGTAVEPLALIRADGPTLPARGMHKPALCIIAQGRKEVQLAEERYIY DPLHYLVVSVTLPLAGQVIDASPDAPYLCVRLDIDPAEITQLISDAGPMEVASRRGDR GLYVDRIDASLLDAVLRLIHLLDSPRDIPMLAPLILREIFYRLLRSGQGQRLHEIAIA DSQAHRITRAIDWINQNYGKPLRIEQLAQVVNLSPSTLHHRFKAVTAMSPLQYQKQLR LQEARRLIFSEGLEVAAAGYRVGYESPSQFSREYSRLFGAPPLRDLARARNTA" misc_feature complement(2240659..2241117) /locus_tag="PA2047" /note="AraC-type transcriptional regulator N-terminus; Region: AraC_N; pfam06719" /db_xref="CDD:461994" misc_feature complement(2240305..>2240679) /locus_tag="PA2047" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene 2241816..2242112 /locus_tag="PA2048" /db_xref="GeneID:878113" CDS 2241816..2242112 /locus_tag="PA2048" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250738.2" /db_xref="GeneID:878113" /translation="MPAFNRASHLVSIRARSGQSHRLGLRLQELAQAGQAAPGCLRYE LRQADGDADLWLLHSEWSDEAAMQAYLSGDAQRVFAEVLWQALAATLDVQERPF" misc_feature 2241843..2242055 /locus_tag="PA2048" /note="Antibiotic biosynthesis monooxygenase; Region: ABM; pfam03992" /db_xref="CDD:427635" gene complement(2242170..2244164) /locus_tag="PA2049" /db_xref="GeneID:878210" CDS complement(2242170..2244164) /locus_tag="PA2049" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250739.2" /db_xref="GeneID:878210" /translation="MSASLPNDTPPDEALPLVLAGPLLRRAEPGRLVFWLATSCPTTI ELILASEGEAERRVRLAEGTHSAIRIGTHAWLHLLDVALDPPLPCARLVDYDLRLAAD GREPAGIAEWAPHLLYPGRQRASLVLKPRLDQLLHGSCRKPHHPAADGLLQVDRLLEE NLLQAESRPALLMMSGDQVYADDVAGPMLVAIHGLIHRLGLYGEHLEGALVNDSEALY AHPATYYRREDLLPAFESNEALRERFFGGVKKPIFTSANAHNHLVGLAEVLAMYLLVW SPAPWRLVRLEPPPGLDARHAQRFAGERRHIEAFRDGLPRVARALAHISSLMIFDDHD ITDDWNLSARWELTAYGHPFSRRIIGNALLAYLLCQGWGNDPQHCGEWLAPVAALMEG AAADGRLPCAEQDRLLDALLDFQHWHYRLPGSPTLIVLDTRTRRWRSERNLGRPSGLM DWEALSEFQQDLLGEKAAIIVSPAPMFGVKLIEGVQKLFSWIGQPLLVDAENWMAHRG AASVMMNIFRHSRTPGNYLILSGDVHYSFVYDIRIRHRERGPRLWQITSSGIKNEFPR RLLDWFDRLNRWLYAPWSPLNWLTQRRSLEIRPRVPQHSQAGERLWNSAGIGQVFIGE DGRPRAVLQVNADGSPATAFERHRDVEDERADQSPVAPGR" misc_feature complement(2242479..2243417) /locus_tag="PA2049" /note="Bacillus subtilis PhoD and related proteins, metallophosphatase domain; Region: MPP_PhoD; cd07389" /db_xref="CDD:277335" misc_feature complement(order(2242563..2242565,2242569..2242571, 2243151..2243156,2243166..2243174,2243397..2243399)) /locus_tag="PA2049" /note="active site" /db_xref="CDD:277335" gene 2244492..2244998 /locus_tag="PA2050" /db_xref="GeneID:877867" CDS 2244492..2244998 /locus_tag="PA2050" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /protein_id="NP_250740.1" /db_xref="GeneID:877867" /translation="MGMDQTRNRLVGLMFQNDYSWLSGRLRRYLGCPHSAEDIASETF LKVLALPDPASIREPRALLTTIARRLMYDGWRRQDLERAYLESLAGLPEALAPSAEEQ AQVVETLLRLERMLAGLSPKARAAFIHSQIGGLTYVEIACLLEVSVSRIHQYMVEGFK QCYQVLAE" misc_feature 2244492..2244995 /locus_tag="PA2050" /note="RNA polymerase sigma factor; Provisional; Region: PRK12525" /db_xref="CDD:139037" gene 2244995..2245948 /locus_tag="PA2051" /db_xref="GeneID:878209" CDS 2244995..2245948 /locus_tag="PA2051" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transmembrane sensor" /protein_id="NP_250741.1" /db_xref="GeneID:878209" /translation="MSQGRRERILDEAAQWMALLQSGHAGAEERLAFQQWRQADAEHG AVFDRLSLGLQSFRNEPLHGLRAEQLIGALEAPSARRRFLQRSLALAAFGVATLALGR IGIVGFPWPGDLYTGTGQRQSFRLEDGSQLVLDARSRVRPEFDGYRRRLRLREGRLLV DVARDPARPFVVDTGRGQVEAQGTRFQVSDDGASSRVVVLESRVRITTADGRQCLLER GQSARFDASAILARGPAEGGESAWLDGRLEVRDRPLGEVLEALRAYRRGIISVADDAA ALRVSGIYPLDDSGVALALLEQSLPIRLDYHGPYWVSIASR" misc_feature 2245025..2245144 /locus_tag="PA2051" /note="Domain of unknown function (DUF4880); Region: DUF4880; pfam16220" /db_xref="CDD:435227" misc_feature 2245211..2245930 /locus_tag="PA2051" /note="Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport [Inorganic ion transport and metabolism, Signal transduction mechanisms]; Region: FecR; COG3712" /db_xref="CDD:442926" gene complement(2245986..2246456) /gene="cynS" /locus_tag="PA2052" /db_xref="GeneID:877801" CDS complement(2245986..2246456) /gene="cynS" /locus_tag="PA2052" /EC_number="4.2.1.104" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cyanate hydratase" /protein_id="NP_250742.1" /db_xref="GeneID:877801" /translation="MQHSQVSPNARQQLAETVVLNKARLGLSWQDLADGTGLALTFVT AALLGQHALPEAAARKVAAQLGLDDDAVLLLQSIPLRGSIPGGIPSDPTIYRFYEMLQ VYGSTLKALVHEQFGDGIISAINFKLDIKKVEDPEGGSRAVITLDGKYLPTKPF" misc_feature complement(2245989..2246429) /gene="cynS" /locus_tag="PA2052" /note="cyanate hydratase; Validated; Region: PRK02866" /db_xref="CDD:235079" misc_feature complement(order(2245989..2245991,2245998..2246000, 2246007..2246015,2246019..2246021,2246025..2246027, 2246031..2246036,2246061..2246063,2246067..2246069, 2246082..2246087,2246094..2246105,2246109..2246120, 2246124..2246126,2246130..2246132,2246145..2246147, 2246154..2246156,2246160..2246165,2246169..2246174, 2246178..2246189)) /gene="cynS" /locus_tag="PA2052" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:238313" misc_feature complement(order(2246088..2246093,2246169..2246171)) /gene="cynS" /locus_tag="PA2052" /note="active site" /db_xref="CDD:238313" gene complement(2246496..2247158) /gene="cynT" /locus_tag="PA2053" /db_xref="GeneID:878074" CDS complement(2246496..2247158) /gene="cynT" /locus_tag="PA2053" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="carbonic anhydrase" /protein_id="NP_250743.1" /db_xref="GeneID:878074" /translation="MRDIIDGFLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRV VPELLTQREPGELFVIRNAGNIVPGYGPQPGGVSASVEYAVAVLGVGDIVVCGHSDCG AMGAIASCACLDQLPAVAGWLHHAEAARAMNSAHEHASEAARLDALVRHNVIAQLANL RTHPCVARALEQGRLNLHGWVYDIESGRIDALDGASRRFVSLAEHPEVRAVGGEPGQA VA" misc_feature complement(2246583..2247140) /gene="cynT" /locus_tag="PA2053" /note="Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an...; Region: beta_CA_cladeB; cd00884" /db_xref="CDD:238449" misc_feature complement(order(2246613..2246615,2246856..2246858, 2246865..2246867,2246895..2246897,2246910..2246912, 2246985..2246987,2246994..2246996,2247030..2247038, 2247042..2247044,2247063..2247065,2247069..2247071)) /gene="cynT" /locus_tag="PA2053" /note="active site clefts [active]" /db_xref="CDD:238449" misc_feature complement(order(2246856..2246858,2246865..2246867, 2247036..2247038,2247042..2247044)) /gene="cynT" /locus_tag="PA2053" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:238449" misc_feature complement(order(2246592..2246594,2246598..2246600, 2246604..2246609,2246613..2246615,2246793..2246795, 2246910..2246915,2246922..2246927,2246976..2246978, 2246982..2246984,2246988..2246996,2247009..2247020, 2247024..2247026,2247030..2247041)) /gene="cynT" /locus_tag="PA2053" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238449" gene 2247273..2248160 /gene="cynR" /locus_tag="PA2054" /db_xref="GeneID:878112" CDS 2247273..2248160 /gene="cynR" /locus_tag="PA2054" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional regulator CynR" /protein_id="NP_250744.1" /db_xref="GeneID:878112" /translation="MLLRHLRYLLAVAEHRNFTRAAEALHVSQPTLSQQVRQLEEQLR VQLLDRSGRSVRPTDAGELYLLHARRALRELEAAQRAIHEVRDLSRGRLRLGMTPTFT CYLVGALVDPFNQRYPGIELSLEELPQDALEAALIDDRLDLGVAFSEPGSVEIDSQPL YLERLGLVLGAEHPAADAPLAAAALAELPLALLRDDFATRRHIDAYLRQQGVTARVAL EANSISAIVDVVRRGRLASILPEAVARQQAGLRCVALRPALPTRQVALFWRQGSHPGA ARLAFQALALELGAELGDA" misc_feature 2247273..2248154 /gene="cynR" /locus_tag="PA2054" /note="DNA-binding transcriptional regulator CynR; Provisional; Region: PRK11242" /db_xref="CDD:183051" gene complement(2248167..2249582) /locus_tag="PA2055" /db_xref="GeneID:877830" CDS complement(2248167..2249582) /locus_tag="PA2055" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_250745.1" /db_xref="GeneID:877830" /translation="MTDRAAPSNWMLALLACAQLIIALDATIVFVALPEISRALDFSA QRLQWVVSAYTVAFGGFLLLGGRATDLLGRRRMYVLGQSLYALASLAGGLAQSELPLI LARAVQGLGGALLFPATLALIGNHFAEGPARNRALAIWSIASAFGLALGSALGGALTE LFGWASIFLVNVPLAGAAALLALRLIPADARRQRGRRFDLAGALTVTAGATLLVFALV QGPESGWDAPSVRFGLYLSVPLLLAFLAIEHYSRDPLMPLRLLGNRNLQVAMLLTAIF MSSYGVQYYFLAIYFQSVYGYSVLQTGLAFLPATLLCTLGIRVAERLLARHGARATLV AGLLLGALGLGLLAACLPLGRGFLALLPAIVILSVGQGMTWTAMWVSAASGVDPAEQG VASGMASMTQQIGGALGLALLVALANAQVRGADAASLLASQARGIEWVTALSALLALF GAALALRLRREEPAALQPSRG" misc_feature complement(2248371..2249540) /locus_tag="PA2055" /note="Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_MMR_MDR_like; cd17321" /db_xref="CDD:340879" misc_feature complement(order(2248374..2248379,2248386..2248391, 2248398..2248400,2248446..2248448,2248458..2248460, 2248470..2248475,2248632..2248634,2248644..2248646, 2248728..2248730,2248737..2248745,2248752..2248757, 2248764..2248766,2249139..2249141,2249148..2249153, 2249160..2249162,2249223..2249225,2249232..2249240, 2249244..2249249,2249397..2249399,2249493..2249495, 2249502..2249507,2249514..2249519)) /locus_tag="PA2055" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340879" gene 2249693..2250595 /locus_tag="PA2056" /db_xref="GeneID:877802" CDS 2249693..2250595 /locus_tag="PA2056" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250746.1" /db_xref="GeneID:877802" /translation="MDLNAVKLLARVAETRSFTQAAVSLGLTQSGLSRAIGRLEAELG VRLLHRTTRSVSLTPDGQLFYERCAPLLAELEEVEKLLVDRQCAPSGPLKITTPQALG RIVIMPVLRELTRCYPQLQIEAAMTDRLVDLTEEGFDAAVRLGRVGDVRLIARPLAAL RWVTVASPEYLRGHGTPERLEQLAGHNCPTVRDLHTGKLLEWQFQRDGQPLSLAVRGD LVLDVADALVDAALVGQGIVQVMGFMAEEAIRRRRLVRILQPFEPPLCPVSLIYPPSR QCSLKIGALYEELKSAHWCGALTY" misc_feature 2249693..>2250142 /locus_tag="PA2056" /note="selenium metabolism-associated LysR family transcriptional regulator; Region: LysR_Sec_metab; NF040786" /db_xref="CDD:468737" misc_feature 2249963..2250559 /locus_tag="PA2056" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(2249993..2249995,2250005..2250007,2250122..2250124, 2250164..2250166,2250170..2250172,2250362..2250364, 2250413..2250415,2250494..2250496) /locus_tag="PA2056" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature order(2249996..2250001,2250011..2250016,2250020..2250025, 2250032..2250034,2250044..2250046,2250050..2250070, 2250251..2250253,2250344..2250358,2250377..2250382, 2250389..2250391) /locus_tag="PA2056" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 2251275..2253815 /locus_tag="PA2057" /db_xref="GeneID:878519" CDS 2251275..2253815 /locus_tag="PA2057" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250747.1" /db_xref="GeneID:878519" /translation="MVTGSRIPRAQQEGPSPVTVISSEEIQNRGYRNVFEALQTQTQN TGMTQGEDYGNTWQPAANALNLRDLGPNHTLVLINGRRVADYPTAYGGSVNFTNLANI PAVMIDRIEILSGGASAIYGSDAIAGVVNIVLKKKFDGVDVNLRAGTTERGGGDNQRL QLVGGGATGDFEGLFGLQVEQRQPVWANQRGFMDSYPDGNNVGYRLNPQSGRYLGDAS CAGLGGLFGGNVAPVPGARGGYRCMTDQYYNNYWTLQTKKENYDGYAGGTWHLSDSGK LFADLLFGFDHLQNNTRGPSFTSPDFINASSGDLERWYRLFSPEEIGGKSSNNSKWRE VSWTGTLGYSDRVANTSWEYELAATRSEYRSDRTTRYTPAAGILDLYLGRKLGERDGY PVYDPDPARLGRPLSEEEWRSLRRNVTQHSESYSQTYSFTGNGELFDLPAGPVAFAGV LEVGKQGYRIRPDSQYNDGSLYNVSKASSSGGSRDRYAAGGEFSIPLHDTLLASAAGR WDQYRFSGRTEEQTTYNLGLEWRPLTSLLLRGSYGTSFRAPDLNYIYQADANGYYPAQ KDYYGCEKGVDGACKNGRVDYVQSGTPDLKSERGRYWSYGFVWSPSSRFDFSADYYHI QIDDLLTTLDPDKLLRDEAACRSGGLDPDSAQCRDTLARVERNAGDASVDPNRLNKVY VNAINAAKERTSGIDLRSNIRWGAGDYGAFSSTLGYTLVLSHDYKQSDDYPSENQRDS LDSHDWRSKLNASLTWDYAQFTSTLFAVRYGSVTNAAGSGRLSPWTVFNASARYRLNE RASVGLTVNNLLDQIKEDDSDGWPYYPTGNYDAMGRQWWLDFSYHFGG" misc_feature 2251278..2253680 /locus_tag="PA2057" /note="Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism]; Region: FepA; COG4771" /db_xref="CDD:443803" gene 2253819..2255627 /locus_tag="PA2058" /db_xref="GeneID:878515" CDS 2253819..2255627 /locus_tag="PA2058" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_250748.1" /db_xref="GeneID:878515" /translation="MPGRILVFACCLLASLARSEPRHAITLYDEPAKYPPGFQHFDFV DPQAPKGGSLRRMESGSFDTLNPFANRGTPISMTQAALIYETLGFQSLDEPFTEYGYL ARYIEKAPDNSWVRFHIDPRARFSDGVAVTAEDVKFSFDSLVEQGSPFWRAYYKEVRE PVVEDRLRIRFDFRHAGNRELPLVLAQLYVLPRHWWQGRDFNRSSMQPPLGSGPYRLE KAEAGRSVSYRRNPDWWARDLPVGRGLYNFERIRFDYYRDSGVALQAFKAGQADINVE TSVKAWSSGYDSPALRDGRLRQESFPYPYPASLQGLVFNLRRPLFEDRRVRQALSLLF DFEWTNRQLFGGRYKRLRSYFDNSEMAARGLPGADELALLEPLRGQIPEEVFGQAYAP PVNDGSGDIHERLVQAYRLLGEAGWHAVDGRLLDTAGRPLRFDLLLQGKSLERALLPF QRNLARIGIDMRLRQVDASQYIERIRARDYDMIVSSFSQSNSPGNEQYSFWHSSSYAD PGGYNRIGLKDPAIDRLVQAVVEADSRAALETAVRALDRVLQWGYYLIPTWYSDEVWI ASWNRFGRPPQAPRYSLGLNTWWEVRERAAPSREAQ" misc_feature 2253927..2255543 /locus_tag="PA2058" /note="Methanobactin MbnE, a periplasmic binding protein of the TonB-dependent transport system, and similar proteins; Region: MbnE-like; cd08497" /db_xref="CDD:173862" gene 2255629..2256702 /locus_tag="PA2059" /db_xref="GeneID:877721" CDS 2255629..2256702 /locus_tag="PA2059" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_250749.1" /db_xref="GeneID:877721" /translation="MGGYLLRRLALILPTLLGILLINFAIVQAAPGGPVDQAIARLQG VDGGGPLGRGGEGGHGALEPQRHGETGIDPQLVAALERQYGFDKPPLQRLWLMLSSYA RLDFGESFYRDARVIDLIAEKLPVSLSLGLWATLITYLVSIPLGVAKAVRHGSAFDLW SSALVVIGYAVPGFLFAIVLIVLFAGGSYLDWFPLRGLASEGAERLGPLARFADYLWH LALPVGSLVVGGFASLTLLTKNSFLDEISRQYVATARAKGLSERRVLYGHVFRNAMLL VVAGLPAALVSVFFTGSLLIEVLFSLDGLGLMGYEAALGRDYPVVFGSLFIFTLLGLL VKLAGDLAYSLVDPRIDFAARRQ" misc_feature 2255629..2256699 /locus_tag="PA2059" /note="ABC-type microcin C transport system, permease component YejB [Secondary metabolites biosynthesis, transport and catabolism]; Region: YejB; COG4174" /db_xref="CDD:443333" gene 2256704..2257720 /locus_tag="PA2060" /db_xref="GeneID:877849" CDS 2256704..2257720 /locus_tag="PA2060" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_250750.1" /db_xref="GeneID:877849" /translation="MAIVLSPLHRRRLAAFRANRRGRLALRLFLALFVTCLFAELIAN DRPLLLEYRGQWFLPVLRDYPETAFGGELPFPPDYRGRFMSERIARDGWALWPPIRFD ARSINYARPAPAPPSAENWLGTDDQGRDVLARVIYGLRLSILFALGLTLASSLLGICA GAVQGYYGGWIDLFGQRFIEVWSGLPMLYLLIILASLVQPGVGWLLAIMLLFSWTSLV DVVRAEFLRGRHLEYVKAARTLGLGDAGVMFRHILPNAMVATLTFLPFLLCGAVTTLT ALDFLGFGLPPGSPSLGELVGQGRDNLQAPWLGLTVFVVLATLLSLLVFIGEAVRDAF DPRT" misc_feature 2256707..2257714 /locus_tag="PA2060" /note="ABC-type microcin C transport system, permease component YejE [Secondary metabolites biosynthesis, transport and catabolism]; Region: YejE; COG4239" /db_xref="CDD:443381" gene 2257722..2259332 /locus_tag="PA2061" /db_xref="GeneID:877832" CDS 2257722..2259332 /locus_tag="PA2061" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_250751.1" /db_xref="GeneID:877832" /translation="MNRELLRVENLSVAYGDTQVVKGIDFSLRAGETLALVGESGSGK SQTAHALLRLLPGAARLGGSVRLDGEELLALSPQALLAIRGQRIGMVFQEPMTSLNPL QRIGRQVGEGLRLHRRLRGAALRGRVLELLELAGLEQPRRLLEAYPHQLSGGQRQRVM LAMALACEPQLLIADEPTTALDVTVQKRLLELLQSLQRRLGMAILLISHDLNLVRRVA DRVCVMRDGQIVEENACETLFRSPRHPYTRLLIEAEPGGLAEPVACRETCLEVRALSL DYPAPGGWLRRRAGLRAVHEVSLRLRRGSTLGIVGESGSGKSSLGQALLRLLPAEGQI LFQGERLDRLHGKRLLPLRRQFQAVFQDPYGSLNPRLSVEQIVGEGLRIHGIGDAGER RARVLEALREVGLDEPCLERYPHEFSGGQRQRIAIARTLVLKPALILLDEPTSALDRS VQCQVVELLRRLQRRHGLSYLFISHDLAVVRALAHDILVLKDGRVVEQGSAAALFSQP RHPYTRELLGAIPALRLEEHLRVAGLGI" misc_feature 2257722..2259293 /locus_tag="PA2061" /note="ABC-type microcin C transport system, duplicated ATPase component YejF [Secondary metabolites biosynthesis, transport and catabolism]; Region: YejF; COG4172" /db_xref="CDD:443332" gene 2259478..2260659 /locus_tag="PA2062" /db_xref="GeneID:877838" CDS 2259478..2260659 /locus_tag="PA2062" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="pyridoxal-phosphate dependent protein" /protein_id="NP_250752.1" /db_xref="GeneID:877838" /translation="MSSLPLYFDYAATTPVDERVIRAMVECLGYQACFGNPASNSHAY GRQARRAVERAREQVAALVGASAGQIVWTSGATESNNLALKGVAQALDAPGHLITSRL EHKAVLDTVQQLADDGWSVTWLAPGTDGLIRPEQVEAAWRADTRLVSLMRVNNELGTL TDIAAIGERVRERGALFHVDAAQASGKVAIDLGRLAVDLMSFSAHKTYGPKGIGALYV GPRAERRLKAQIHGGGHEQGLRSGTLATHQIVGMGEAFALAGELFEEEGRRIAGLQRR LLEGLAQIDGWRLNGSADARIAHTLNLTFDNPAFVPQALESSLAVSSTSACNSARPAP SHVLLALGHDAASAGRSVRLSLGRYTREADVDAAVAALKAAADSGAPAWQPFLGVSRA G" misc_feature 2259487..2260563 /locus_tag="PA2062" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl18945" /db_xref="CDD:450240" misc_feature order(2259703..2259708,2259715..2259717,2259931..2259933, 2260015..2260017,2260024..2260026,2260084..2260086, 2260093..2260095) /locus_tag="PA2062" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99742" misc_feature 2260093..2260095 /locus_tag="PA2062" /note="catalytic residue [active]" /db_xref="CDD:99742" gene 2260862..2262085 /locus_tag="PA2063" /db_xref="GeneID:877894" CDS 2260862..2262085 /locus_tag="PA2063" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250753.1" /db_xref="GeneID:877894" /translation="MDDLSPDSALPPAGSAQDNDAPRQLVVCIDGTSNRFGDQPTNVV RLYRSLSRDPRRVLAYYDQGVGTFGLKETLFEWQKFPSRIAGLAFGWGLKRNVEGAYR FLAEHYRPGDQIFLFGFSRGAYAVRVLAAMLRAVGLIDAHQPHLFDYAWTLLTTRMPP RDEDKRAGTRRRGPDFGLLGRFRKVFGRQVKVHFLGLFDTVTSVGWVYDPLTVPYSSN NEMVDVVRQALAIDECRCFFRQNLWFGEKDRKSDVLQVWFPGMHSDVGGGYAPKDSRL ALVAFTWMLGEALEAGLHVDPARSRDQLRARSKQGPDPTAPILPVMTRPWRLAEWLPL LVWDRRSGNRAWRWSRGRPRSRPLEPVGQETRVKLHRSVQRRLDECPDYRPCNLPALE RCDLIDDSPLLDGYR" misc_feature 2260925..2261947 /locus_tag="PA2063" /note="Uncharacterized conserved protein, PA2063/DUF2235 family [Function unknown]; Region: COG3673" /db_xref="CDD:442890" gene complement(2262105..2263082) /gene="pcoB" /locus_tag="PA2064" /db_xref="GeneID:877759" CDS complement(2262105..2263082) /gene="pcoB" /locus_tag="PA2064" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="copper resistance protein B" /protein_id="NP_250754.1" /db_xref="GeneID:877759" /translation="MSRQPKPARLAGGALALGLLLGLPNPVEAAQDNGMEHSAMDHGA MPGMDHGAASPAPAQPMEHRGMDHGRMPGMSHAARQPPAQAASSQSRTPIPVPTEADR RAAFPPLEGHKVHDSALNSFFLLDQLEYQDADDGSALAWDASGWIGGDINRLWLRSEG ERLDGKTEDAEVQALFGHAIGPWWDLVAGVRQDFKPGSPQTWAAFGVQGLALYDFEAE VTAFLGENGQSALRLEGEYDILLTNRLILQPSAEVNLYGRNDPARGIGSGLADSELGL RLRYEIRREFAPYIGVTWNRSYGNSADLARAEGEDDDEARFVAGIRMWF" misc_feature complement(<2262873..>2262998) /gene="pcoB" /locus_tag="PA2064" /note="multicopper oxidase; Provisional; Region: PRK10965" /db_xref="CDD:236810" misc_feature complement(2262108..2262932) /gene="pcoB" /locus_tag="PA2064" /note="Uncharacterized conserved protein involved in copper resistance [Inorganic ion transport and metabolism]; Region: PcoB; COG3667" /db_xref="CDD:442884" gene complement(2263079..2264977) /gene="pcoA" /locus_tag="PA2065" /db_xref="GeneID:877718" CDS complement(2263079..2264977) /gene="pcoA" /locus_tag="PA2065" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="copper resistance protein A" /protein_id="NP_250755.1" /db_xref="GeneID:877718" /translation="MHRTSRRTFVKGLAATGLLGGLGLWRAPAWALAGPGQQNLLAGD SFDLFIGETPVNLSGSPAAAMTINGSLPGPTLRWREGDNVTLRVRNRLAEDTSIHWHG IILPANMDGVPGLSFEGIAPGGLYEYRFKVRQNGTYWYHSHSGLQEQAGVYGALVIDA REPEPFSYDRDYVVLLSDWSDEKPQRILAKLKKQSDYYNFHKRTVGDFIDDVSANGWA ATLADRKMWAEMKMSPTDLADVSGYTYTYLLNGQPPDGNWTGLFRPGEKLRLRFVNAS AMSYFDVRIPGLKMTVVAADGQHVEPVSVDELRIAVAETYDVIVEPGGERAYTLFAQS MDRSGYARGTLALAEGLSAPVPTPDPRPLIGMDDMGMGGMDHGAMGHGAATRPASEMD HSKMSGMDVNGMDHSKMAGMDMSGMDHSKMAGMDMNGMDHSKMAGMDMNGMDHSRMGM GAMPMQSHPASEDGNPLVDMQTMTPTPKLADPGLGLRDNGRRVLTYADLRSRFADPDG REPGRTIELHLTGHMEKFAWSFDGIKFSDAEPLRLTYGERLRIVLVNDTMMTHPIHLH GMWSDLEDEQGNFLVRKHTIDMPPGTRRSYRVTADALGRWAYHCHLLFHMEMGMFREV RVDEGDNA" misc_feature complement(2263100..2264965) /gene="pcoA" /locus_tag="PA2065" /note="copper-resistance protein, CopA family; Region: copper_res_A; TIGR01480" /db_xref="CDD:273649" gene complement(2265126..2265764) /locus_tag="PA2066" /db_xref="GeneID:877703" CDS complement(2265126..2265764) /locus_tag="PA2066" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250756.1" /db_xref="GeneID:877703" /translation="MSPTLQDARLLWDFLGQGRCHVPCELLVVCGSYDLRVCDHACEL LERGLAERLLFTGNTGHWTRHLWVEPEAELFARHARARGVSDSLIVIEPRATNFAENI AFARELFPDLRRATFVTKPNSIRRVALTLPVRWPGLEGHVDAPDYAFPDGISNLVGVL GVIDEMVGDLDRIMRYPALGFQVACPIPAQVMDAWERLVARGFDRHLVNPPR" misc_feature complement(2265318..2265683) /locus_tag="PA2066" /note="YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The...; Region: YdcF-like; cd06259" /db_xref="CDD:99750" misc_feature complement(order(2265387..2265389,2265396..2265398, 2265408..2265410,2265462..2265464,2265471..2265473)) /locus_tag="PA2066" /note="putative active site [active]" /db_xref="CDD:99750" gene complement(2265761..2266429) /locus_tag="PA2067" /db_xref="GeneID:878262" CDS complement(2265761..2266429) /locus_tag="PA2067" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_250757.1" /db_xref="GeneID:878262" /translation="MDGVLISSREAIAAAWSRVAGEQGVALGPDCLRDHVHGRPGGYT LDYLFGHLPMERRRILKQRVDALEEGADCPLLPGVAAVIRQLRWLDVPLALVTSSWPA RIDHVLRQHDLQAAFRTLVSRDDVVHGKPAPDGYRLAAARLGVAPSRCLVFEDSLSGV QAACAAGATCVAIGEESGLLAAGARWSVRDFRELRIVREDDRLYCQHRHPATTGSERS VGVP" misc_feature complement(2265848..2266429) /locus_tag="PA2067" /note="Beta-phosphoglucomutase, HAD superfamily [Carbohydrate transport and metabolism]; Region: YcjU; COG0637" /db_xref="CDD:440402" gene complement(2266431..2267594) /locus_tag="PA2068" /db_xref="GeneID:877702" CDS complement(2266431..2267594) /locus_tag="PA2068" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_250758.1" /db_xref="GeneID:877702" /translation="MYLIFSGYFAAEGLIYPFWPTWLASLGFGASQIGLLIAAAYWPQ VIAGVALTYVADWRIDQLRLATLLAALAGACALLFQLAEGLPLFIALSVLYGAFWTSV LPLTESYLLKRDKAALQNYGRVRAVGSLAFILTATLGGLLLGRFGQQLVPALVGLTML LTALACLFLRRRSLRRPDSPLPGARRRPDLRGILRQRPLLLAIAAAGMIQLSHSLYFT TASLGWQTLGYSSFSVGAFWGLAVIAEISFFAVSNRILDRHPALQVMLFSSLCAALRW GLLAGSEHLAAILLGQCLHALSFAAYHAAVMRYIRDHAPESARVLTQGIYYSLAVALP MGLASPAAGWLYEGLPQWSYLIMALFALGGAVLVWLALQSARDASTSVFSRSV" misc_feature complement(2266485..2267588) /locus_tag="PA2068" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" misc_feature complement(order(2266578..2266580,2266587..2266592, 2266599..2266604,2266611..2266613,2266674..2266676, 2266686..2266688,2266698..2266703,2266848..2266850, 2266860..2266862,2266941..2266943,2266950..2266958, 2266965..2266970,2266977..2266979,2267199..2267201, 2267208..2267213,2267220..2267222,2267274..2267276, 2267283..2267291,2267295..2267300,2267451..2267453, 2267547..2267549,2267556..2267561,2267568..2267573)) /locus_tag="PA2068" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:349949" gene complement(2267638..2269362) /locus_tag="PA2069" /db_xref="GeneID:877951" CDS complement(2267638..2269362) /locus_tag="PA2069" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="carbamoyl transferase" /protein_id="NP_250759.1" /db_xref="GeneID:877951" /translation="MIILGITNNDLAGACLVRDGGIVAAASEERFTRQKDHKAWPSRS IDYVLGEAGIDLADIDRIAYGWNAGFDAGRHLDLYLDRVLEEARERPEGLPHLRKRIA DEMANDKAKRGEFDAFVRANGLRGKVEYIDHHECHALGAFVCSPFDEALTLTCDGRGD FQSLTVTHYRADGGETVLQRETSVDSLGYFYGRITRLLGFKPNRHEGKITGLAAFGDA EKLLPLMNDMIRLENGRLRARCGELYLPSYDGYSDPLLQRCAAERPADVAAAAQRHSE DLLVAIAREHVARTGCANLCLAGGVFGNVKLNQRLREIPGVRDVYVLPCMGDGGLALA AAVAVAYRENGTRFPAPSMALGPDARSAAQNAELIASQYPQLAYSRPANLIETLVEAL RENQVLGMFKGRMEFGPRALCNRSIVYHPGDASANDWLNQRMERTEFMPFAPVTAVEH AEACYVGWREHQVAADYMTMTYDCHADFRARCPAVVHVDGTARPQIIRPQADPFMHAL LHAWHARSGQPALINTSFNRHEEPIVCAPQDALGALEDGMVDLVVLGESLLVWRKGEN AFARARFE" misc_feature complement(2267674..2269362) /locus_tag="PA2069" /note="Predicted carbamoyl transferase, NodU family [General function prediction only]; Region: COG2192" /db_xref="CDD:441795" gene complement(2269542..2272184) /locus_tag="PA2070" /db_xref="GeneID:877675" CDS complement(2269542..2272184) /locus_tag="PA2070" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250760.1" /db_xref="GeneID:877675" /translation="MHRSLHTDAPLGAALLLALQLAPGSAAAAEEQAPVDPPTVQLQR IEVTGSAIRRVDAETAVPISVLRAEELRQQGVTSTEELIGRLSGNQGVYNSSRSVGSA TGGASFADLRGIGANKTLVLLNGRRLANNAIDGSAVDLNTIPFAAIDRVEVLRDGASA LYGTDAIGGVINFITRKSLNEGRFDSGYASPTHDGGGNQRNVSASWGFGELEEDRFNV FAVANYDKQERLGAKDRGYTYNYQPGRGLDYSSGTAFPGNWSQGANASNPLAAGGCKG ADLIPRNGICRQSLWRYLDLVPETEKTSVFSRATGKLADEHNVSLEYFWSRSDNATQV GPGTLTGLQIDPGTAFYPGNGITPGPGGFVLDPSRPVEVNWRQSVLGPRLQSSQNTGQ RLLLGFDGQFAGWDYDIGASYNQNKVVDHIHSGYVDDRAAALGIANGTLNPFGPQTDA GLAYLGSHALSGDFRTSVGRVKGLDARASREIGDWFGAGPAALALGGEFRKEAFHQDI QDFAGNVQSLGVDPAATVSGERNLKAQYAELNVPVLDSLELSAAIRHDKYSDFGSTSN PKYSFRFQPFRQLVLRGAYSEGFRAPSLYELYNPTFTTYTSANYDDPRLCAGGQPSQG GIANRDCAQQFYNATGGNTDLRPETARNVTLGLVYQPLRDLSVGLDFWWIRIANQIAE FPEAAIFADPQAYAGRIVRKADGSIDHVVTGLANLGKVKTSGVDLSLDYRFPASRYGQ FGLDLQGTYVSRYDFQQQIGGQYLDNVGDFQGVGVIARWKHVANATWSRDAWQATLSN RYTSGYNDYDRASHGKVGSWNLWDLAGSYRLSHALGLTLGVKNLFDREPPFSNQTYTF QSGYDPRYTDPYGRILFGRLSYSF" misc_feature complement(2269545..2272001) /locus_tag="PA2070" /note="TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel; Region: ligand_gated_channel; cd01347" /db_xref="CDD:238657" misc_feature complement(order(2271660..2271686,2271720..2271752, 2271801..2271824,2271843..2271860,2271915..2271944, 2271972..2272001)) /locus_tag="PA2070" /note="N-terminal plug [active]" /db_xref="CDD:238657" misc_feature complement(order(2270784..2270786,2270931..2270933)) /locus_tag="PA2070" /note="ligand-binding site [chemical binding]; other site" /db_xref="CDD:238657" gene 2272460..2274568 /gene="fusA2" /locus_tag="PA2071" /db_xref="GeneID:879566" CDS 2272460..2274568 /gene="fusA2" /locus_tag="PA2071" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="elongation factor G" /protein_id="NP_250761.1" /db_xref="GeneID:879566" /translation="MARTTPIELYRNIGIVAHVDAGKTTTTERILFYTGVNHKMGEVH DGAATMDWMVQEQERGITITSAATTAFWQGSTKQFPHRYRFNIIDTPGHVDFTIEVER SLRVLDGAVVVFSGADGVEPQSETVWRQANKYHVPRLAYVNKMDRQGADFLRVVAQIK QRLGHVPVPIQLAIGSEENFSGQIDLVKMKAIYWNDADQGTSYREEEIPAELRALAEE WRAHMVEAAAEANDELMNKYLEGEELSIEEIKAGLRQRTLANQIVPAVLGSSFKNKGV PLVLDAVIDYLPAPSEIPAIRGTDPDDEEKHDERHADDDEPFSALAFKIATDPFVGTL TFARVYSGVLTSGDAVLNSVKGKKERVGRMVQMHANQRDEIKEVRAGDIAALIGMKDV TTGDTLCAIDKPIILERMDFPDPVISVAVEPKTKADQEKMGIALSKLAQEDPSFRVKT DEETAQTIISGMGELHLDIIVDRMRREFGVEANIGKPQVAYRETIRNTCEIEGKFVRQ SGGRGQFGHCWIRFAPADEGQEGLEFHNEVVGGVIPREFIPAIQKGIEDQMQNGVLAG YPLIGLKATVYDGSYHDVDSSEMAFKIAASMATKQLSQKGGAVLLEPVMKVEVVTPED YMGDVMGDLNRRRGLIQGMEDTPAGKVIRAEVPLGEMFGYATDVRSMSQGRASYSMEF VRYAEVPASVAEGIVARQGR" misc_feature 2272460..2274565 /gene="fusA2" /locus_tag="PA2071" /note="Translation elongation factor EF-G, a GTPase [Translation, ribosomal structure and biogenesis]; Region: FusA; COG0480" /db_xref="CDD:440248" protein_bind complement(2274727..2274739) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2072" /bound_moiety="AmrZ" gene 2274740..2277334 /locus_tag="PA2072" /db_xref="GeneID:878516" CDS 2274740..2277334 /locus_tag="PA2072" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250762.1" /db_xref="GeneID:878516" /translation="MLASAIASGTAVSQVSKHLLMFLAALFLALGACGWAILHIARHQ DDIAIEQSHFYVEKALQNRRENSEQFSTTYSFWTDAYVYLGNRVDADWAFTKNNLGSV LYTTNGYDGVFVIDDRGTRYAMLEGELSERSLADSLNADTGDILRSARRAAVDEAAIS RYVDFDGAPAILVASAIKPTSDHAPIDLAKASVMVFVDRLTPAKLAKLGGDYGIANLH LLAGGAAGDKESLALEGTPHRLAWVSSRPGSAMLRETALPLLGIFVLAAGLLFWLSRS AVLNARAVDRQQKVLKRSNQALLASEERFKSIAEAASDWIWEVDGHFVFTYLSVRFRD VTGYQPEAWIGRRLDELLDSDTVNIVKWLEGLPDAGAPSSLVCAFRDSQGQARVGKLS ASAIRNGVASGYRGTAADITDEVEAHAKIQHLSLHDALTGLPNRNKLFQFLERLLAEK AGKSPVAVLMLDLDRFKPINDQHGHPAGDAVLYAIAERLRASTRDQDMVARLGGDEFV VVSTHVSSKLEIEKFCSRLIDVINREVAYEGHSFHVGASIGVALAPEHGGDPRGLLRC ADVAMYEAKAAGRNTWRFYLEAMDSHLAEKKLRETELRAALQNGEFELYYQPRFLAQE QTIASAEALIRWNHPRRGLIGPDEFIGLAEESDLIVQIGNWVLREACATAASWPGEVM VSVNVSPAQFMTGDIVWQVREALRLARLDARRLELEVTENVMLNDVDGALRTMTALKE LGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFVASMEKTGRDRSIVQAIINLGNAL NLRVTAEGVETEGQMHILRDEQCHELQGFLLSRPLDAQRLRDLLEREAGQTQAPQVSA EGHAARRP" misc_feature 2274914..2275399 /locus_tag="PA2072" /note="CHASE4 domain; Region: CHASE4; pfam05228" /db_xref="CDD:428380" misc_feature 2275265..2277277 /locus_tag="PA2072" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" protein_bind 2274752..2274764 /locus_tag="PA2072" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2072" /bound_moiety="AmrZ" gene 2277552..2278982 /locus_tag="PA2073" /db_xref="GeneID:878119" CDS 2277552..2278982 /locus_tag="PA2073" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter membrane subunit" /protein_id="NP_250763.1" /db_xref="GeneID:878119" /translation="MSNNNEASRPKIEVRSIDYVPRHERHGKVWHQAPFWFTGNFVLT TMVTGFTGPALGLGALYSILAIVLGVCFGTFFMAFHANQGPRMGLPQMIQSRAQFGLR GAIVPFAAVVFVYIGFNVFNVILATDAINTVLPGHRAPWYVLLIGVAVLLAIVGHDLL HTVQRWLTYVMIAVFGVLTVSALRSLEADAALGGTPAFSWSAFLVQLSAAAGYQISYA VYVSDYSRYLPHETPTRKVIFWTYLGAAGSALWLMSLGAFLASALPAPDAIGSVREVG NRLYPGFGTFTVLIAVPALVGIMAVNCYGAMLTSLSAIDAFRKVTPTLNLRVTGIGVI ALVVFGVALSIPESYLGSFNTFVLLMLYFLVPWTAVNLVDFYFVRNGHYAISEIFNPE GIYGHWGRPGLSAYLAGLLAMVPFMSLSFYSGPFAVALGGADVAFVVGLLVAGAVYAF MCRALDLEAERRLATLGERLLEEGGA" misc_feature 2277552..2278937 /locus_tag="PA2073" /note="Purine-cytosine permease or related protein [Nucleotide transport and metabolism]; Region: CodB; COG1457" /db_xref="CDD:441066" gene 2278982..2279794 /locus_tag="PA2074" /db_xref="GeneID:877704" CDS 2278982..2279794 /locus_tag="PA2074" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250764.1" /db_xref="GeneID:877704" /translation="MAKVTVACCQIAPRIGAQEHNLRLAERAIREAARRGANVVVLPE LAASGYVFADRGEALALAETRDGPSLGLWKALAGELDLVIVGGFCERLDPQRVANSAA LVDADGVRAIYRKAHLWNEESGIFEAGEQPPPVVATRFGRIAVMVCYDLEFPEWVRLP ALSGAQLLCAPVNWPAAPRPEGERPAEVVRVQANASVNRLFIAACDRCGQERGVDWVG GSVIVDADGYPLDGPLQGEAGMLLARLDLAEADEKRISAHNHVHRDRRPELY" misc_feature 2278994..2279791 /locus_tag="PA2074" /note="Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases); Region: nitrilase_2; cd07580" /db_xref="CDD:143604" misc_feature order(2279111..2279113,2279324..2279326,2279336..2279338, 2279345..2279347,2279423..2279428,2279432..2279437, 2279498..2279500) /locus_tag="PA2074" /note="putative active site [active]" /db_xref="CDD:143604" misc_feature order(2279111..2279113,2279324..2279326,2279423..2279425) /locus_tag="PA2074" /note="catalytic triad [active]" /db_xref="CDD:143604" misc_feature order(2279327..2279338,2279342..2279344,2279363..2279371, 2279426..2279428,2279432..2279446,2279453..2279458, 2279546..2279551,2279555..2279563,2279567..2279572, 2279633..2279638,2279768..2279782) /locus_tag="PA2074" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:143604" gene complement(2279917..2281578) /locus_tag="PA2075" /db_xref="GeneID:877728" CDS complement(2279917..2281578) /locus_tag="PA2075" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250765.1" /db_xref="GeneID:877728" /translation="MLLRTISVETAEQTELNAALLCGFAIPASDRNFIAYSLNEQVDE NDSRVYIASLFKTDDGFRLGRLDTDEACEAAIQVFRQLVREATTGNRRTSDLAYHLID LQDAAIAPSRREEHRSLVLEREWVMKLVTFESPHGYGPALDGEEPCAEVPPLVQEALF EDAAPDVLAEDDADETTDGPAEPIDEPEAAEDETVTEAGCVEPEPRPEAETAAPEGGA PAEFAAKAEQSAKVADAEAIGAFVDNASHLREELADLAQMLHPALHAADATGSANLPS PDAAEESSMPPSPSPLAAPAPEPVSARVPSLSLRLRVPPARLAGAEGGANAREAPTQA AAVIRQPEDEAHVDTDTALDIGNDTEHLLQDVQGTLADLAGMAQQLSQQKQEALKQQE SLESLQTQLHEKERQLQEKEKQLRQWHKRLQDDRQALERETEQSNRLLAERSAALQQL AESVEARERSSARRAEVLQIEQERLEELRSQQNLRQAELEKREASVQQRSLELGERFK KLESAREKLAQIVKGFNETVQFNTALHAISHTGLKRQEESAAELE" misc_feature complement(2280868..>2281176) /locus_tag="PA2075" /note="Prolipoprotein diacylglyceryl transferase; Region: LGT; cl00478" /db_xref="CDD:469786" misc_feature complement(2280523..>2281164) /locus_tag="PA2075" /note="DNA polymerase III subunits gamma and tau; Validated; Region: PRK07764" /db_xref="CDD:236090" misc_feature complement(<2280013..>2280510) /locus_tag="PA2075" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" protein_bind complement(2281858..2281870) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 2281873..2281885 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(2281901..2281913) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 2282480..2283382 /locus_tag="PA2076" /db_xref="GeneID:878182" CDS 2282480..2283382 /locus_tag="PA2076" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250766.1" /db_xref="GeneID:878182" /translation="MPSLRQLMYFACVAEYGSIGQAAEVLHVSQPSLSRQIQALEVHI GEALFVRGPAGVSLTEVGRVVHCRAVKIIAEAKALTRDIGDGDDRQLHIGFSRYLDPG WSGELARQLKEARVCSAVSPSWAPSLDLLSLVRESSLDAAIIGAPPKVVREYELMEIG SYEHVIALSETLHRRLAPDWSLNDLIGEPLLVPKDSLFPAYSQFMNDAMDAAAFAPRR SVRPNDLSILLAQVASGDGFAFLPLSLTKFAYPGVAFTALPAAVNEGFRLPVGLAVSP TSRLRASDTQFECFVETARRVAAG" misc_feature 2282486..>2283025 /locus_tag="PA2076" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" misc_feature 2282744..2283376 /locus_tag="PA2076" /note="LysR substrate binding domain; Region: LysR_substrate; pfam03466" /db_xref="CDD:460931" gene complement(2283419..2285323) /locus_tag="PA2077" /db_xref="GeneID:877987" CDS complement(2283419..2285323) /locus_tag="PA2077" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250767.1" /db_xref="GeneID:877987" /translation="MTLSRLSLAILSVLAGAPAFADDSGVDLDQGWNQTQKTAWLEAG QGSRMLPLAWLVALEQRASEEPLMSDALIRQYGYVPHTLGGSSVKVVQGYAVDRSDDS DLTFTKLRWKALQGSREPWVGPTCSMCHTSHISYQGTQLTVYGGQTMGDLAGFQLEIL GALQSTRADTAKFERFARKVLGADGLVSGYNDANKARLQAALDATIVRLRDGSHFNLP HDPEFGPGRLDAIGSIFNSVGYELHADEQIYGAEDAPVSYPFLWNVPQLDRVQWTGFN PNHINVVDIDNRKFDVGALARNAGEAVGVFADVKVLSPIQSALHIGYPSSINVDNLIR IEDQLGQLKPPAWPNQLFGAPEPTRVAEGRELYRQHCSSCHTPLDRNDLRTPVKTVLT HLQARGEVAPIGTDPWTACNSIAQLKTGYVRGKPYLSFVGTGQRGFYGKQAYAVDVLQ EVVVQALAARGLSVALGAFQTAALGIFDGQLPPLISPVPDSPDADSAEATAADAPGAL LLAENVAADSDKARRLEQCLAMTSDLMAYKARPLNGIWASPPYLHNGSVATLYDLLLP PDLRPRTFYTGSVEFDPVNVGYITDAGGANRFLFDSGKPGNANGGHDYGNAQFNEQQR RALVEYMKTL" misc_feature complement(2283425..2285230) /locus_tag="PA2077" /note="di-heme-cytochrome C peroxidase; Region: CytoC_perox; NF040606" /db_xref="CDD:468579" gene complement(2285363..2287237) /locus_tag="PA2078" /db_xref="GeneID:877905" CDS complement(2285363..2287237) /locus_tag="PA2078" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250768.1" /db_xref="GeneID:877905" /translation="MHPTFSRVLLAAALAAAGSPAVATEIQLEQGWNAEQRASWYDAS LGSRLLPLAWAQALERPDSEERLFSEDNARRLGFPLRNWQGGELRLPRGFALDQQDDS QFSDTRLRWKARQSSSEPWVGLNCAGCHSTDISYRGSELTVDAGATLANVQAIFDEVL AALRRTSDDGDKFARFAGNVLGSEDSPANRELLKAALVKRAALIDTLLSMSATDLQPG PGRLDATGQSLNRAAINSGARHLQANPTDAPTSFPALWHTLQMDKLQSSGFVPNVKVL DLNGQVFDLGYLAGDIGVVQGDYGDVVSHPLSGLEGYISSIRVDNLTRVEGLIHKLKA PAWPSQLFGAPDSARLAQGKRLYEENCAACHASIGRDDLQTPIKVRQVRLKAHGDDAP IGTDPWMACNTFTFSSPSGNYFGLFRPSLGTPSGVGIVGRTSKIADMQVPEVFQIMLG KKGQLADGIAEIIHAIVTGQQTLPGSDSLQAVPAGQLLLAGAAPADSQAQSLAAGEVP TDKSARKDYCLNTEHPFLGYIARPLNGIWATAPYLHNGSVPSLYDLLLPQEQRPATFY TGSHEFDPSRVGYLTAPGPDNAFLFDTHLEGNSNAGHDFAREYDESQRLALLEYLKTL " misc_feature complement(2285369..2287144) /locus_tag="PA2078" /note="di-heme-cytochrome C peroxidase; Region: CytoC_perox; NF040606" /db_xref="CDD:468579" gene complement(2287523..2288929) /locus_tag="PA2079" /db_xref="GeneID:878467" CDS complement(2287523..2288929) /locus_tag="PA2079" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_250769.1" /db_xref="GeneID:878467" /translation="MNDPQGFEAISRREQGLQRRLSAAQMSMIAIGGAIGTGLFMGSA FAIGFAGPSVLLSYAIGALITLLLMGCLAEMTVAHATPGSFGAFAEHYVGPLAGFLVR YAYWAAIVLAVGTEVTAVAMYMKYWFAGIPEWVWIISFSTLLIGLNASSVKAFGNFEY CFSTLKIAAIVAFILLGAYLVFGSANPAYGVHNYSAHGGFFPHGLKGMWIAVVVSIFS YLSVEMIAVAAAEAEHPEQAVRSAFRSTIVRLVVFYLLTLALMLAIVPWDQAGQSQSP FVTVMQAIGLPGATGVMNFVVLVAALSAMNSQLYITTRMMFSLSRAGHAPKGLGELSR QGVPLNALLLSSVGIALATLLNLVYPEQSFTLMMAVSMFGALFTWLMIFFTHLCFRRH RARHGGAPLAFRMRLAPWSTLLGLALMAAILVTTFFTEAFRMTLVFGVPFLALLSALY LVFVRKPGRDCPIERATP" misc_feature complement(2287556..2288905) /locus_tag="PA2079" /note="L-asparagine transporter or related permease [Amino acid transport and metabolism]; Region: AnsP; COG1113" /db_xref="CDD:440730" protein_bind complement(2288479..2288491) /locus_tag="PA2079" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(2289085..2290335) /gene="kynU" /locus_tag="PA2080" /db_xref="GeneID:877856" CDS complement(2289085..2290335) /gene="kynU" /locus_tag="PA2080" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="kynureninase KynU" /protein_id="NP_250770.1" /db_xref="GeneID:877856" /translation="MTTRDDCLALDAGDPLADLRQLFALPDGVIYLDGNSLGARPRAA VERAAEVVAAEWGEGLIRSWNSADWRGLPERLGDKLAPLIGARAGEVVITDTTSINLF KVLSAALRIQEEDAPGRKVIVSESSNFPTDLYIAEGLTDMLQRGYRLRLVDDPEQLPA AIDADTAVVMLSHVNYKTGYLHDMREVTRLVHENGALAIWDLAHSAGALPLDLHAADA DYAIGCTYKYLNGGPGSPAYVWVAPRLRERVWQPLSGWFGHSRQFAMEPRYQPGEGIT RFLCGTQPITSLALVECGLDIFARTDMQRLRDKSLALADLFIELVESRCERFGLTLVT PREHARRGSHVSFEHAQGYAIVQALIDRGVIGDYREPGILRFGFTPLYTRFVEVWDAV QALLEILQSEAWKEPRYQVRHKVT" misc_feature complement(2289088..2290335) /gene="kynU" /locus_tag="PA2080" /note="Kynureninase [Amino acid transport and metabolism]; Region: Bna5; COG3844" /db_xref="CDD:443054" gene complement(2290339..2290980) /gene="kynB" /locus_tag="PA2081" /db_xref="GeneID:878591" CDS complement(2290339..2290980) /gene="kynB" /locus_tag="PA2081" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="kynurenine formamidase KynB" /protein_id="NP_250771.1" /db_xref="GeneID:878591" /translation="MTSLRYWDISPALDPNTPTWPGDTPFQQEWAARLDEQCPVNVGR ITLSPHTGAHVDGPLHYRADGLPIGQVPLDIYMGPCRVIHCIGANPLVTPEHLAGQLD DLPSRVLLRTFERVPANWPEGFCAIAPATIECLAERGVRLVGIDTPSLDPQHSKTLDA HHAVGRHGMAILEGVVLDDVPAGDYELLALPLKFTHLDASPVRAVLRALPTAE" misc_feature complement(2290354..2290968) /gene="kynB" /locus_tag="PA2081" /note="arylformamidase; Region: trp_arylform; TIGR03035" /db_xref="CDD:132080" protein_bind complement(2291088..2291103) /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA2081, PA2080'" /bound_moiety="LasR" gene 2291113..2291589 /locus_tag="PA2082" /db_xref="GeneID:878476" CDS 2291113..2291589 /locus_tag="PA2082" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250772.1" /db_xref="GeneID:878476" /translation="MSLDAIDLRILRHLQQDGRMSNQDLAEKVSLSPSACLRRLRLLE SEGIIRGYSVELDAERLGVELEAIVHVSLRQDVEGWHEAFIARVRDWPEVVTAYVVTG ATNYVLRVRARNLKHYSDFIVNKLNRAAGVTDIRSEIVLQEIKAGADLLDLVNLKS" misc_feature 2291113..2291535 /locus_tag="PA2082" /note="DNA-binding transcriptional regulator, Lrp family [Transcription]; Region: Lrp; COG1522" /db_xref="CDD:441131" gene 2291791..2293065 /locus_tag="PA2083" /db_xref="GeneID:879745" CDS 2291791..2293065 /locus_tag="PA2083" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ring-hydroxylating dioxygenase subunit" /protein_id="NP_250773.1" /db_xref="GeneID:879745" /translation="MSEYIETDDASYFRVRRQAYVSAELHRRELHEIFDDSWLYAAHL SELREPGDFITRDVGGRNLIIQRRADGEPAVYLNACAHRGAKVCAERQGNSQRFTCPY HGWTYDSHGSLIGLPDKAAYQHAGQCHPELSLTQVKHAVYRNFLFIHYGARQASLETY LGQAKDYIDLICDQSEAELEIIPGGFEHSIKANWKLLAENGVDAYHLPFAHKRYLEYL NTLGTDPESHKRHGRGEALGNGHALIISGPPSTGRPIAYWSPLFPEALKPSIAAKFER LVERFGQARAEDIAHTNKSLFIFPNLVINDILGLNIRSFFPTAADEVSVTVWGAGFAD ETREERAARINGLISFIGPGGFGTPDDVEILESCQRAYAHAALGYSDFSRGMGPATRR HVDEEQNRGFWREWSRRLGQQPAALRRLAVAV" misc_feature 2291827..2293017 /locus_tag="PA2083" /note="Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit [Inorganic ion transport and metabolism, General function prediction only]; Region: HcaE; COG4638" /db_xref="CDD:443676" misc_feature 2292358..>2292702 /locus_tag="PA2083" /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily; Region: SRPBCC; cl14643" /db_xref="CDD:472699" gene 2293153..2294985 /locus_tag="PA2084" /db_xref="GeneID:877958" CDS 2293153..2294985 /locus_tag="PA2084" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="asparagine synthetase" /protein_id="NP_250774.1" /db_xref="GeneID:877958" /translation="MCGITGWTDWSRDLGEQRSILERMTRTLAPRGPDAEGLWLSRHA LLGHRRLAIIDLENGAQPMLAEAGGRVALTYSGEVYNFRELRAELETLGQVFRTRSDT EVVLRAYLQWGEASFVRLRGIYGFALWDEREQSLWLVRDRFGVKPLYYYPTAGGVLFA SEPKAIFANPEANPVLDASGIAELFALTTAPTPGHGLYKGLRQVRPGQALRFDRNGVR ELVYWALRAERHEEGAEDSAERAGQLLREAVAEQLVADVPLGSLLSGGLDSSAISAFA VAALDGDARRLPTFSVDFPGEGRGFVPTPWQSSWDEPYAQLAANFLGTPHRTVLVAPE EVLEQDEAVLQARDLPGWGELDASLYLLFRQVREHTTVALSGESADEVFGGYPFFHDP SALAHDGFPWLAGKSGPWQLLRREVAERVAAPEYIRARYREALAEVPRLDGEDAAQRR QREVAYLALSRWLPAMLERKDRMSMAVGLEVRVPFCDHRLVEYVWNLPWALKSVAGES KSLLRRALRGHLPQAILERRKSGFPANPDPRYLALLRERVGRLLDDGRSPLFELVDAG RVRQALEQGTPLPSPRASASPTAGLAYLLNLDRWLTRHGVDISL" misc_feature 2293153..2294964 /locus_tag="PA2084" /note="Asparagine synthetase B (glutamine-hydrolyzing) [Amino acid transport and metabolism]; Region: AsnB; COG0367" /db_xref="CDD:440136" gene 2295013..2295522 /locus_tag="PA2085" /db_xref="GeneID:878489" CDS 2295013..2295522 /locus_tag="PA2085" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ring-hydroxylating dioxygenase small subunit" /protein_id="NP_250775.1" /db_xref="GeneID:878489" /translation="MSLALSRPDSDLLARVSDFLVAEAELLDDRLLDTWFALFERAAR YRVLPLQEQLAGQAPEDSLYIIDDDHVRLRERVDSILGGHTWMEQPRSRTRRLVGNVR LKRVEGELVSSRSNFVVHQFRNREAWSFVGEASHVLRDGPGGLRIVSREIRLDHETIS AQRRISIIL" misc_feature 2295043..2295489 /locus_tag="PA2085" /note="Ring hydroxylating dioxygenase beta subunit. This subunit has a similar structure to NTF-2, Ketosteroid isomerase and scytalone dehydratase.The degradation of aromatic compounds by aerobic bacteria frequently begins with the dihydroxylation of the...; Region: ring_hydroxylating_dioxygenases_beta; cd00667" /db_xref="CDD:238357" gene 2295533..2296435 /locus_tag="PA2086" /db_xref="GeneID:882121" CDS 2295533..2296435 /locus_tag="PA2086" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="epoxide hydrolase" /protein_id="NP_250776.1" /db_xref="GeneID:882121" /translation="MNTDPLLPGFDYLTLHTSAARLRVAVKGSGPPLLLLHGYPQTHL AWHRIAPRLAEDYSVVLADLRGYGESRALDEEGADYSKAALARDQLETMGQLGFERFA VIGHDRGARVGYRLALDHPQAVAAFVSLTVVPILDNWAAVNKVFALNAYHWFLLAQPY DLPERLIGADPEHFLDYTLRRMAQGRDIYHPQALESYRRAFRDPAVRHAMCEDYRAAV GVDADADQADRDAGRRLQCPVQVLWQERPYAAGQHPLEIWKTWAGQVEGAAIGASHML PEDAPDAVLEHLLGFLASHREALR" misc_feature 2295572..2296417 /locus_tag="PA2086" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene 2296432..2297088 /locus_tag="PA2087" /db_xref="GeneID:883012" CDS 2296432..2297088 /locus_tag="PA2087" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250777.1" /db_xref="GeneID:883012" /translation="MSAVERDPAAQATLWRQRVFEVHAAMSAYVAERHRREDLGDWVA TSARIFADLPATDDLRAEAWQAVFFRAQALIEQFIVARPADYRLDDWARATARIYRAL EPAGRGDPASAADRLARQAALYGSRFEVQAEADGRAVFHNRHCAIWDYRERARARGVP ITLESACTYCTKLLSAFVTASDCRADWRLYEEPQGHGCVWTITADSLNQGAGVHERDH " gene 2297072..2297920 /locus_tag="PA2088" /db_xref="GeneID:878147" CDS 2297072..2297920 /locus_tag="PA2088" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250778.1" /db_xref="GeneID:878147" /translation="MNAIIEQARSLDGYQDSSELLQRRDQDWVLDRAGIEPRSLLDLG CGIGSLLLGGARRWPGLQRLWGIERSPLRLEQARAQLRGAGVEARLLEGDLLDLPPLA ERFELISMTAVLHWLYPDEERLFRWVARHLEAQGVFLFTSHHPFAEDGLGGEDDLVAQ ALVEMGLAAPERVAALYAEAGLLPMGTRTRGREALRERVERHFRVDSIVSRPAVLRVA DSAEYQRFHAATFGTYFAPLVPATRLEEFFVRLGRIAERRMQADGQVSEIPVSVWRCR AREGEA" misc_feature 2297177..2297494 /locus_tag="PA2088" /note="Trans-aconitate methyltransferase [Energy production and conversion]; Region: Tam; COG4106" /db_xref="CDD:443282" gene 2298012..2300663 /locus_tag="PA2089" /db_xref="GeneID:883129" CDS 2298012..2300663 /locus_tag="PA2089" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250779.1" /db_xref="GeneID:883129" /translation="MSNPRSPRLRLVPVLCAVGLACLGQPGESAAEEVRATSSAEIQR FDIPAGELAQVLLSIVRQSRTPIAFDQHLVEGLPAPAIQGSYSVEQALQRALQGSGLE YSRSAAGVLSLQRATAPDAALPAAKPAGTLATVVVTGTRKADVKAGESLAPIDVVSAE QLRDSGSGDLRDALVRLLPSLSRQAQAYNASALTNAQSLRGLSPNHVLVLVNGKRRHE TANINVSGGLQSGSTGVDLDTIPLAAIERIEVLRDGASAQYGSDAIAGVINVILKSAD HGGRLAYDNGRYGDGDGLTQNGGVNGGLRFGESGFLNLSAQFREQARTIRAGIDQRTG HYGNPSIGDPSLHRQALAYNAGVALDDNVELYSFATYTHRSVSSAQIYQLPSLAPRLY PNGFTPRITSDEDDYSLTLGARGGELFGAWDWDLSSTYGADRPEIGMDHSINLALYGE TGDSPRSFDLARYKATQWTNNLDLRRDFDLAWLPAPLNFSWGLEQRRELYEVEAGDPW SYYNGGSKALPGQAPATAGQWSRDVLGAYLDLSIALDERWQLETAARYEHYSDFGSTT NGKLASRYRFSPEVSARASLSSGFRAPSLAQENYTSLGVSPTIASGLLAVNSPAARLL GAEDLEPEKSISYNLGLVLDPLPDLNLAIDAYRIEIRDRIVDGATYSGQPAIDALRAG GISIPAGLTQVSTHYMTNGADTRTHGLDLTASYLTRLGEWGRIDWRLGANVNRTKLVR NHRGRNGQPLLNDQQQAWITSSTPRSQVSLQADWSYRRWGLTLRETRYSKTVSELDYY TGEHAYSTTVFNRFENSPKYITDVALRYAASRNLTLSAGANNLFDVKPDKLPAESAYL GFNQYDTYASQISFNGAFYYLGAAYTF" misc_feature 2298210..2298359 /locus_tag="PA2089" /note="Secretin and TonB N terminus short domain; Region: STN; smart00965" /db_xref="CDD:198033" misc_feature 2298342..2300516 /locus_tag="PA2089" /note="Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism]; Region: FepA; COG4771" /db_xref="CDD:443803" gene 2300676..2301755 /locus_tag="PA2090" /db_xref="GeneID:880856" CDS 2300676..2301755 /locus_tag="PA2090" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250780.1" /db_xref="GeneID:880856" /translation="MSIELRGGVRASAVIGDSAFARQAARFLPDTRSRAVSAFDIQQK ARLEEADGLDGALFTVSAAWPDPWLVAGWALAAAPRLRATVAHRPGSAQPTVAARALA TLDGLSNGRAGVHLVIGSSDADVRRDGDFADKDERYRRAVEYLEVFTRALESREPFDY HGEFYRLEDAGSGFLPIQRPRPPLSVGGSSAQAQRLAVRFADVYAGHFASPTQTAELK RRLNEEAAEQGRRLKFWKHFQVILGDSPAAALDIAEHYRQAAFELLLARPLDELAASP QVARDGERDRLARLEPEALREWVANTVQRSFAGVLVGSVGEVAEQILAFHRAGIEIVQ LEATTENAEDIRLRRQLIERLRRVA" misc_feature 2300769..2301440 /locus_tag="PA2090" /note="Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the conversion of alkanesulfonates to the corresponding aldehyde and sulfite. Alkanesulfonate monoxygenase (SsuD) has an absolute requirement for reduced flavin...; Region: Alkanesulfonate_monoxygenase; cd01094" /db_xref="CDD:238527" misc_feature order(2300856..2300873,2300880..2300882,2300889..2300894, 2300901..2300903,2300952..2300954,2300958..2300963, 2300970..2300975,2300982..2300984,2300991..2300993, 2301042..2301044,2301051..2301056,2301171..2301173, 2301177..2301188,2301192..2301197) /locus_tag="PA2090" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238527" misc_feature order(2300865..2300867,2301024..2301026,2301084..2301086, 2301243..2301248,2301288..2301290,2301384..2301386, 2301390..2301392) /locus_tag="PA2090" /note="active site" /db_xref="CDD:238527" misc_feature 2300931..2300936 /locus_tag="PA2090" /note="non-prolyl cis peptide bond [active]" /db_xref="CDD:238527" misc_feature order(2301030..2301056,2301075..2301083,2301171..2301212, 2301393..2301404,2301423..2301440) /locus_tag="PA2090" /note="insertion regions; other site" /db_xref="CDD:238527" gene 2301752..2303035 /locus_tag="PA2091" /db_xref="GeneID:879678" CDS 2301752..2303035 /locus_tag="PA2091" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250781.1" /db_xref="GeneID:879678" /translation="MSGVAREAMEDVAPAAPGVGEFGVASCGVLLASVVGVIFGPTGL VISSFSLFIEPIAADLDWDRGQSALPVTLLGLAVALSSPLKGWLVDRWGARALVLPLT AALALCLASLALARSGWQLYLLFALLGLLTPGNIPYARILGGWFERRRGAAYGILGLG FGVGGPLALYLGSACIDAFGWRATFLVYGLLEGLLALPLLYALFRERPGDLPQARRTP ADALPGATPGQAWRSADFWLIVGNLILGVFAVTGVMVHGVPLLQERGLSREVATDVLA ALWVGMIVSQPALGYLLDRYDTPRIALPFALLAALGLLLLLLGGPPALLWGAVFLIGL GAGGETGTTQYFVSRYFGLRHFSVIYGSIQPFTFAIAISLGSWLLGYFYDRAGSYAGS TLVLLGAFGVAAGLLVMLGRYRYAIDGEARSHGRD" misc_feature 2301833..2302981 /locus_tag="PA2091" /note="MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; Region: MFS_YcxA_like; cd17355" /db_xref="CDD:340913" misc_feature order(2301866..2301871,2301878..2301883,2301890..2301892, 2301995..2301997,2302136..2302141,2302145..2302153, 2302160..2302162,2302223..2302225,2302232..2302237, 2302244..2302246,2302469..2302471,2302478..2302483, 2302490..2302498,2302505..2302507,2302595..2302597, 2302607..2302609,2302754..2302759,2302769..2302771, 2302781..2302783,2302829..2302831,2302841..2302846, 2302853..2302858,2302865..2302867) /locus_tag="PA2091" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340913" protein_bind 2302991..2303003 /locus_tag="PA2091" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 2303022..2304215 /locus_tag="PA2092" /db_xref="GeneID:879668" CDS 2303022..2304215 /locus_tag="PA2092" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_250782.1" /db_xref="GeneID:879668" /translation="MGETERSRAEVGVWLLAGLAFVVGTVELVVAGVLDELAASFAVS QGRAGLLMSLYALVYALLGPLLVYLSAGIERRRLLAGALLVFVGANLASAAAPSFALL LASRLLVAASASVIVVVAITLAVAIVAPERRGRAIGLVFAGIVASLVLGVPLGTLIGE FWGWRSLFLLLAGVALLGLPLLLRLLPAIPGAPGIAPAEQLRALARGRVPFAHLASLL QMTGQFTVYTYIVPFLVGSMALDKPTISLVLLVYGGGGILGALLGGRAADRWPGPATF VAFLLLHALALVLLPFATGGLPLLLGAVVFWCVFNMAPGPAIQKYLVELSPDTAAIQI SLNTSAIQLGVALGAFIGAILVDQVAVRALPWWGAALILGAAACGWLSAQRPAGTADC RERLD" misc_feature 2303058..2304119 /locus_tag="PA2092" /note="Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; Region: MFS_NepI_like; cd17324" /db_xref="CDD:340882" misc_feature order(2303088..2303093,2303100..2303105,2303112..2303114, 2303208..2303210,2303358..2303363,2303367..2303375, 2303382..2303384,2303442..2303444,2303451..2303456, 2303463..2303465,2303667..2303669,2303676..2303681, 2303688..2303696,2303703..2303705,2303787..2303789, 2303799..2303801,2303949..2303954,2303964..2303966, 2303976..2303978,2304021..2304023,2304030..2304035, 2304042..2304047,2304054..2304056) /locus_tag="PA2092" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340882" gene 2304318..2304827 /locus_tag="PA2093" /db_xref="GeneID:877960" CDS 2304318..2304827 /locus_tag="PA2093" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /protein_id="NP_250783.1" /db_xref="GeneID:877960" /translation="MDSQGSIKNTLIAQLFQQNYDWLCKKLSYQTGCSHSAEDLAAEA FLQVWMLPDPASIRSPRAFLATIAQRLMYESWRRKDLERAYLQILAEAPEAVQPSPHE QWMLIESLQAIDRLLDGLSGQARAVFLMSQLEGLTYVQIGERLGLSLGRIHQLMKDAL HCCYRGFQE" misc_feature 2304321..2304824 /locus_tag="PA2093" /note="RNA polymerase sigma factor; Provisional; Region: PRK12525" /db_xref="CDD:139037" gene 2304824..2305780 /locus_tag="PA2094" /db_xref="GeneID:878540" CDS 2304824..2305780 /locus_tag="PA2094" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transmembrane sensor" /protein_id="NP_250784.1" /db_xref="GeneID:878540" /translation="MSEKPERQRIVEEAIEWMVRLQSGDFSAAEGDALERWKALSSEH AEVFRQLLGSLAPLQDSPWRGQPSATVLRALEQPSSRRRFVGGALGLFVLLAGGAGLE RWVQAGMGLPGELATGTGERRDWLLADGSRLRLNARSKVRPLLDGAQRRLELRRGAMR LEVKEDPRGAFALDCAAGRVDCASGSLLLAEERGAIRLVTLRGSARLTTGEGRQLAVA ARRSLLFDAGGLLEQGPMQAGEDAWASGWLEVHDRSLAWVAEAFRPYLPGILQLDAEI AGNRVSGLFPLDDMHTSLDMLGRSLPIRVLRYSDYWISLRPA" misc_feature 2304857..2304976 /locus_tag="PA2094" /note="Domain of unknown function (DUF4880); Region: DUF4880; pfam16220" /db_xref="CDD:435227" misc_feature 2305010..2305762 /locus_tag="PA2094" /note="Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport [Inorganic ion transport and metabolism, Signal transduction mechanisms]; Region: FecR; COG3712" /db_xref="CDD:442926" gene complement(2305782..2306627) /locus_tag="PA2095" /db_xref="GeneID:878168" CDS complement(2305782..2306627) /locus_tag="PA2095" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250785.1" /db_xref="GeneID:878168" /translation="MGCQQHAWPAHAPEQVEAEVNYIRDNGQRPVAYTYPAPAGTPQR SALLQPTRVAIRNARLLAQPASLEREGFQLVREASAVGDFEDEAQVRERYYPESIALL RRLTGAAEAVIFDHTLRVDQAGREERGLREPVRYVHNDQTLRSAPRRVRDHLPAERAE RRLAGRFQIVNLWRPFGHPAQRAPLALLDARSLAFDDLVASDLVYRDKVGETYSVKPN PEHRWYYYPHLLPEEALLLKIYDSREDAQARLGAHTAFDDPCTPADAPPRQSIELRCL LFFDE" misc_feature complement(2305791..2306579) /locus_tag="PA2095" /note="CmcJ/NvfI family oxidoreductase; Region: CmcJ_NvfI_EfuI; NF041278" /db_xref="CDD:469175" gene complement(2306776..2307810) /locus_tag="PA2096" /db_xref="GeneID:878454" CDS complement(2306776..2307810) /locus_tag="PA2096" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250786.1" /db_xref="GeneID:878454" /translation="MPTPPWSPRRSAISAHLLIQFGIDRGLGLEQCLAGSGLDIRLLG DPSGEIDAAQELSVVRNLVRHLGDACAPGLAAGLRYHLNAYGIWGFALLSSPTFLSAA QLGLRYLDLTFAFHGIRLEVHDDEAHLVLDDAGIPEDLRIFLLERDAGGVLRIQRDLT GQRLPILRAGFRRPPPADPAPYVRELGLCPAFGQADNRVVFERRFLDLPLPGANPEVA RACEEQCRALLARRQVRGGLAGRIRDRLLRTPGHLPDMQTLAMELHLTVRTLRRRLDD EGSSYRLLLDEVRQALAEELLATGAIRLEEIAERLGYGEVSNFSHAFRRWKGMTPRQY RQRRRLDAMS" misc_feature complement(2307181..2307735) /locus_tag="PA2096" /note="Arabinose-binding domain of AraC transcription regulator, N-term; Region: Arabinose_bd; pfam12625" /db_xref="CDD:432679" misc_feature complement(2306794..2307543) /locus_tag="PA2096" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" gene 2307957..2309432 /locus_tag="PA2097" /db_xref="GeneID:877933" CDS 2307957..2309432 /locus_tag="PA2097" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="flavin-binding monooxygenase" /protein_id="NP_250787.1" /db_xref="GeneID:877933" /translation="MHNESRPEAPLRVLVVGAGFAGLGLAIRLRQAGIDDYLVLEKAA DVGGCWRENRYPGAACDVPSHLYSFSFEPKADWSRKFAPQAEILDYLRHCADKYRLRE KIRFHCEVEEARFDAGSGEWQVRCADGQTLRARALVCATGQLSRPLLPRLPGLERFQG PAFHSANWDAEVELAGKRVAVIGTGASAIQFVPRIAPQVQRLSLFQRSAPYVIAKPDR TYADWERRLKARWPWLQRLDRGLKYLHHESRMLAFATFPALMKVMRLSFHRHLHRQIA DPQLRARLVPDYPLGCKRILISNDYYPALARSNVELVDTGIREVTEDAVVGRDGRRHE VDAIIFGTGFAATEFLAPMRILGLDGRDLRQAWADGAEAYKGISVSGFPNLFILYGPN TNLGHNSIVYMLESQFPYVLGCLRQLQEQGLRYLDVKPEVQRRFNLEVQQGLRHTVWE RGCDSWYKTAAGKNTNNWPGYTFVYRWRTRRPELADYDLAR" misc_feature 2307969..2309300 /locus_tag="PA2097" /note="Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism]; Region: CzcO; COG2072" /db_xref="CDD:441675" gene 2309443..2310372 /locus_tag="PA2098" /db_xref="GeneID:878517" CDS 2309443..2310372 /locus_tag="PA2098" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="esterase" /protein_id="NP_250788.1" /db_xref="GeneID:878517" /translation="MSPPQRLRAGLLRGCLRLLFRGLVRPPMPVALQRGVLRGLSLAT LGAGGVVRERRSLAGVPCEWLRPRGVEARRRVLYLHGGAYLIGSPATHRAITTHLARR CAAEVCAVDYRRAPEHPFPAARDDALAVYLALLEAGHSPRRLLLAGDSAGGHLALSLA LELKARGLPLPAGLLLFSPWTDLGCQRLHTPAAGDPLLSRAWLESAVRLLLPADAEPG SAALSPLHADLAGLPPLLVQVGEDELLRDDSLRLAQRAGEQGVAVRLQRYAGCWHVFQ AHAGVLASADRALDEAAAFVVECSAEGDRCRTS" misc_feature 2309668..2310270 /locus_tag="PA2098" /note="alpha/beta hydrolase fold; Region: Abhydrolase_3; pfam07859" /db_xref="CDD:400284" gene 2310357..2311112 /locus_tag="PA2099" /db_xref="GeneID:877776" CDS 2310357..2311112 /locus_tag="PA2099" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_250789.1" /db_xref="GeneID:877776" /translation="MQNILISGAASGIGAASARLFHRRGWRVGLLDIDAEALRGLAAQ LPGAWHRAVDVSEPDAVGEALAQFCADGRLRLLFNCAGVLRFGRFEEVALEDHARLLA INLHGVLNCCHAAFPFLRATPQAQVLNMGSASGLYGVPEMAVYSASKFAVRGLTEALE LEWRRHGIRVADLMPPFVRTPMVAGQAYQPPVLRRLGLRLDAEDIAEAAWRHAHSRRV HRPVGGLFTALYWAGQLSPPWVNRAVMAWLSRG" misc_feature 2310411..2311106 /locus_tag="PA2099" /note="SDR family oxidoreductase; Region: PRK08267" /db_xref="CDD:236210" gene complement(2311333..2312766) /locus_tag="PA2100" /db_xref="GeneID:877769" CDS complement(2311333..2312766) /locus_tag="PA2100" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250790.1" /db_xref="GeneID:877769" /translation="MPVKANIDTDSIFRFFLPEGPGLKYKRLAQGIEESIRNGVLRQG VKLPPHRILADKLGVTAGTVSRAYGELERMGLVEARVGDGTFVRNRGRERAREAGFRN FVDSTEMCNDMSRNMHIPGNETELLSRSLQQLSAAPELLQELMLYTPDTGLLRHRQAG ATWLSHGEFQAEHQQILCVNGSQHGLLVVLMAMLRAGDTLVTEQLSYPGLISAAQLLG IKVLGLEMDEEGLLPDALEEACRTNRITALYCTPTIQNPTTAVMSGARRKEIAKICRE HGLIVIEDETHAVLMAERPTPLCHLLPERGILIGGMSKAVAAGLRVGYVHAPASMVSR MAAALRNSCWMATPLVLEIASRWVEDGTASALLEYQRGEIARRQALVVDLLQGLTYRS HLCCPHFWVEVPAPWRAIEIEQGMRGQQHLVTTAEAFSTGRGTLPQAIRISVSNSPGG GNTLSDGFAVLAALLREGPQEMLTMRA" misc_feature complement(2311360..2312715) /locus_tag="PA2100" /note="DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; Region: ARO8; COG1167" /db_xref="CDD:440781" protein_bind 2311886..2311898 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 2312899..2313789 /locus_tag="PA2101" /db_xref="GeneID:879640" CDS 2312899..2313789 /locus_tag="PA2101" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250791.1" /db_xref="GeneID:879640" /translation="MASLVTAVLFLVVCISWGTTWLGIKIAVESVPPLTAAGLRFLIA FPLFLLFARLRHETIFFPRRLLAFFVFVTLGYFSVPYYLLNYGEQYVASGLTALLFSS MPVFILIFSAIFLRERIYLSQILGIAIGFGSLFMIIRSQGLHLDYTELLGVLAILLAA IMHALSYVITKRQGADIGVITFNTLPIGIAGLGLFMAGLVMEHPNLSAVTSRSWAALI YLGLVASVGGFIVYFFLLKRLSPVVLSFVFIIFPVFAVIIGAWYEGVAISRELIGFTV LLLAGFAITKLPIEKLLGRR" misc_feature 2312917..2313762 /locus_tag="PA2101" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene 2313791..2314249 /locus_tag="PA2102" /db_xref="GeneID:880022" CDS 2313791..2314249 /locus_tag="PA2102" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250792.1" /db_xref="GeneID:880022" /translation="MNTNVLTEHALSVIYRHACRTYPRECCGFVLADAKVKEGTNIQD ELHMADPRRYPRTAANGYTFSVTDTVFLNSSFKTCSPVSVIYHSHPDVGAYFSREDID KALYAGEPMLPVDYLVVDVAAGNVRGAKLFAWRNGRFECTREFGPSSQDE" misc_feature 2313803..2314207 /locus_tag="PA2102" /note="Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif [Posttranslational modification, protein turnover, chaperones]; Region: Rri1; COG1310" /db_xref="CDD:440921" gene 2314512..2315690 /locus_tag="PA2103" /db_xref="GeneID:877899" CDS 2314512..2315690 /locus_tag="PA2103" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein MoeB" /protein_id="NP_250793.1" /db_xref="GeneID:877899" /translation="MLATSGGSGVEALSDEEVQRYVRHITLPGVGREGQQRLKQARVL IIGTGGLGSPACLYLAAAGVGTIGLVDFDVVESSNLQRQVVHGYSTLGMPKVESAQRR MQDLNPYIEVVTHRYAIDADNAQSLIQSYDLVLDGTDNFATRYLVNAVCAKLGKPLVF GAIYRFEGQVSVFNLEGGPCYQCLFPNNPPPEMAPSCNAGGVIGVLPGVIGLLQATEA VKALVGLGKSLSGRLLRFDALLMHFNEVKFNRRDDCPACGKTAAENPRHWREGLLCQA SAAPSQRLDDDRYIDPGCLLQLMKSNSENYALLDVRDAGELEVCQLPGIVHVPLNELA SHFANLDFSKRYILVCYAGTRAERAAIQLMGAGFSNVQVLDGGMKRWAKEIEQHMPMY " misc_feature 2314551..2315288 /locus_tag="PA2103" /note="Molybdopterin or thiamine biosynthesis adenylyltransferase [Coenzyme transport and metabolism]; Region: ThiF; COG0476" /db_xref="CDD:440244" misc_feature 2315373..2315687 /locus_tag="PA2103" /note="Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]; Region: PspE; COG0607" /db_xref="CDD:440372" gene 2315709..2316626 /locus_tag="PA2104" /db_xref="GeneID:877985" CDS 2315709..2316626 /locus_tag="PA2104" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cysteine synthase" /protein_id="NP_250794.1" /db_xref="GeneID:877985" /translation="MIYDSLLDLIGGTPVIRLSKLSARLGVSVFAKLESFNPGGSHKA RIALWMILDAERKGILVRGKGQTILEPSGGNTGIGLAMAGNILGYRVSLVVPDNYSPD KRQLLELYGAHVVLSDSRKGNNSHGELAIQILLEHPEFVMLNQQRNPANPQAHREATA LEILRDFAGQPPPDFFFAGIGTGGHITGVGEVLRNHWPDMAIYGVQPEQCDLLDDRHA SHEIQGLSIGIVPEVCNLGIVTGMVGVSKSACLSMIREVLQNDSVSMGLSSAANLVAV LNMASAMPSGARVLTMIYDGVESYMDAFR" misc_feature 2315739..2316614 /locus_tag="PA2104" /note="This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of...; Region: CBS_like; cd01561" /db_xref="CDD:107204" misc_feature order(2315751..2315759,2315796..2315798,2315814..2315816, 2315820..2315822,2315952..2315954,2315961..2315963, 2316009..2316014,2316021..2316026,2316033..2316038, 2316201..2316206,2316480..2316488,2316492..2316500, 2316570..2316572,2316600..2316602,2316609..2316611) /locus_tag="PA2104" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:107204" misc_feature order(2315835..2315837,2315931..2315933,2316246..2316263, 2316378..2316380,2316510..2316512,2316588..2316593) /locus_tag="PA2104" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:107204" misc_feature 2315835..2315837 /locus_tag="PA2104" /note="catalytic residue [active]" /db_xref="CDD:107204" gene 2316708..2317403 /locus_tag="PA2105" /db_xref="GeneID:878854" CDS 2316708..2317403 /locus_tag="PA2105" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_250795.1" /db_xref="GeneID:878854" /translation="MRAALMECCSPQLVERIVAHSMFEEARRWCEEDLQAFASKDPAA QGRTSDIAFGYSSFKAVLHYRLSHMLCLRSTSEGDPERALEATALLVSSRGKLLSGAE IHPRCKIGSRFILDHGHGTVIGETAVIGDDCYILGGVVLGATGISANPAGKRHPTIGS RVQIGAFTRVLGDIAIGDDVFVGPHCVIKDDIPVGSVVTLRSELQVIRGPHIVQQLQP AATQTQIQPMEAS" misc_feature 2316786..2317304 /locus_tag="PA2105" /note="Serine acetyltransferase [Amino acid transport and metabolism]; Region: CysE; COG1045" /db_xref="CDD:440667" gene 2317400..2318134 /locus_tag="PA2106" /db_xref="GeneID:877733" CDS 2317400..2318134 /locus_tag="PA2106" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250796.1" /db_xref="GeneID:877733" /translation="MTQTASLFLQDSYREECLARITDVVEDGLLLDQTVFYPQGGGQA GDSGWLTLADGTRLRIADTRKGTEAGAGRDAILHIPAEGQATVLRAMKPGEVVLAQID WVRRYRHMRLHTAAHMLCAVLPYPVNGCSITDEHARLDFVTSEPLSREAIDSALAAMV EAAHPVSIDTMSDDALRARPDLVRTMSVQPPMGAGQVRLVSIKDTDLQPCGGTHVANT EEVGVVRVSKMEKKSARTRRVVLVLG" misc_feature 2317400..2318131 /locus_tag="PA2106" /note="Ser-tRNA(Ala) deacylase AlaX (editing enzyme) [Translation, ribosomal structure and biogenesis]; Region: AlaX; COG2872" /db_xref="CDD:442119" gene complement(2318226..2318624) /locus_tag="PA2107" /db_xref="GeneID:880032" CDS complement(2318226..2318624) /locus_tag="PA2107" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250797.1" /db_xref="GeneID:880032" /translation="MTRAINDPGNEDPGSLLETDADALLGGAAAQAPEERCRLAAQAC IRACERYLALCTESSREQRQHAGDCADLCRLAALLLERRSPWAPAACELAARYALACA ERCDGDEPLERECAGACRRFVEACRPLLPA" misc_feature complement(2318238..2318522) /locus_tag="PA2107" /note="Cysteine-rich 4 helical bundle widely conserved in bacteria; Region: DUF326; cd08026" /db_xref="CDD:153434" misc_feature complement(order(2318334..2318339,2318346..2318348, 2318358..2318360,2318367..2318372,2318388..2318393, 2318400..2318402,2318409..2318414,2318421..2318426, 2318430..2318435)) /locus_tag="PA2107" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:153434" gene 2318795..2320567 /locus_tag="PA2108" /db_xref="GeneID:880037" CDS 2318795..2320567 /locus_tag="PA2108" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="thiamine pyrophosphate protein" /protein_id="NP_250798.1" /db_xref="GeneID:880037" /translation="MSSTVADQLLERLSQWGVKRVFGYPGDGINGIMGAMGRRAEAFD YIRVRHEEMAAFMAGAHAKFTGEVGVCLATSGPGAIHLLNGLYDARMDHQPVLAIVGQ QAATALGSDYQQEVDLQSLFKDVSAYVETVVSPAQLLHVLDRALRVAVGERQVATVIV PNDVQQMAAPKRQPHEHGHVMSAVGFVQPRPYARDADLEAAAAILNRGRRVAILAGAG ALGAHRQLEAVAERLAAGVAKALLGKAAVSDDLPYVTGSIGLLGTRASSMLMEHCDTL LIVGSTFPYSEFLPKAGQARAVQIDLYPRNIGIRYPIDQALLGDAGETLERLLPLLEQ KKHGAWRRRVERAVTASREEARRQAEEPADPINPQRVFRSLSEQLPDDAILCGDSGSH TNWYARDIRMRPGMLGSLSGKLATMGSGVPYAIAAKLAYPQRPVVAMVGDGAMQMNGN AELVTVQQYWQRWDSPTFIVLVLNNGDLNQVTWEQRALAGDPEFSPAQEVIDFPYARY ADMLGFKGIRVDRPEDIDAAWAEAFAADRPVLLEVVTDPNVPPLPPHISFEQAKHLLG AMLQDDPKRWGVIRQSARQVLARH" misc_feature 2318795..2320558 /locus_tag="PA2108" /note="thiamine pyrophosphate protein; Provisional; Region: PRK08273" /db_xref="CDD:181344" gene complement(2320586..2321062) /locus_tag="PA2109" /db_xref="GeneID:878701" CDS complement(2320586..2321062) /locus_tag="PA2109" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250799.1" /db_xref="GeneID:878701" /translation="MPSRLSLIAALLLPLAVQAEPADTRALLADSLADSQAQVEAAEQ AMRRSENKAVQLYAKRVLTEQQEFDHQLRALAGEKALALPSPRQTERQAAAPGGFDER GFLDAQIRQQDRLVARFEGIARDSADPDLRRFADEWLARFYHHRELADQLRSGRAD" misc_feature complement(2320607..2320999) /locus_tag="PA2109" /note="Domain of unknown function (DUF4142); Region: DUF4142; pfam13628" /db_xref="CDD:433361" gene complement(2321130..2322071) /locus_tag="PA2110" /db_xref="GeneID:879174" CDS complement(2321130..2322071) /locus_tag="PA2110" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250800.1" /db_xref="GeneID:879174" /translation="MNDSIHGGLRVCQSTPLVQLQDRGRFGCRHLGVTQGGALDWLSM GWANWLLGNPLDAAVIEIALGGFVADCRADGWLALAGGDLGATLDGQPLPAWGAFAVR GGQRLAFAHPRQGARAYLAAPGGFAGERQLGSLATVAREGLGGPRADGKALAAGDSLG WLADGARPRALPLPSERIMDCTGEARLELILGAQIGDFPAMSLFDAFNGDWQVDTRAD RMGVRLLGPRLECRQQSMISEGIALGAVQVPPDGQPIVLLNDRQTIGGYPRLGALAPL ALARLAQCLPGQRVRLLPTVQEAAHREHRRLLAAWDA" misc_feature complement(2321157..2321984) /locus_tag="PA2110" /note="Allophanate hydrolase subunit 2; Region: AHS2; smart00797" /db_xref="CDD:214821" gene complement(2322068..2322781) /locus_tag="PA2111" /db_xref="GeneID:877648" CDS complement(2322068..2322781) /locus_tag="PA2111" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250801.1" /db_xref="GeneID:877648" /translation="MSQPQPRIEVAAIDSFVLRLFERIDEANMPWLLAAEENLRAAFG AALLDLVPSYTTLLLQYDLLQLDPGEARARIAAALSDLRPKRQDGGRLHILPTWYDPR VGPDLAPLARRKQLGVAELIRRHSQREYRVFALGFSPGFAFMGLVEEALAAPRLATPR QRIAAGSVGIAERQTAVYPQASPGGWNLLGRCPVRLFDLTLDGYSLLRAGDRVRFEPI GHAEFVRLGGDDTPLEVQA" misc_feature complement(2322095..2322778) /locus_tag="PA2111" /note="5-oxoprolinase subunit B/Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]; Region: PxpB; COG2049" /db_xref="CDD:441652" gene complement(2322778..2323521) /locus_tag="PA2112" /db_xref="GeneID:879110" CDS complement(2322778..2323521) /locus_tag="PA2112" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250802.1" /db_xref="GeneID:879110" /translation="MNNLLLNCDIGESFGAWRMGLDAEVMPLIDCANIACGFHAGDPG TMRRTVALAVEHGVRIGAHPGYPDLVGFGRRSLACSAQEVEDLLLYQIGALDGLCRAQ GTRVRYVKPHGALYQDMMRDPAILAAVLRALAAYDRTLPLMLMSTRDNTAARALGEAH GIELWFEAFADRAYDGAGYLVSRSQPGAVHHDAETVLAQALLLARGAALRASDGSALA LEAQTLCVHGDNPASLAAVRRIRDALEAA" misc_feature complement(2322781..2323521) /locus_tag="PA2112" /note="5-oxoprolinase subunit PxpA; Region: PRK05406" /db_xref="CDD:235446" misc_feature complement(order(2322841..2322843,2322973..2322975, 2322982..2322984,2323006..2323008,2323015..2323017, 2323171..2323173,2323183..2323188,2323192..2323194, 2323300..2323302,2323333..2323335,2323495..2323497)) /locus_tag="PA2112" /note="putative active site [active]" /db_xref="CDD:212099" gene complement(2323554..2324783) /gene="opdO" /locus_tag="PA2113" /db_xref="GeneID:879972" CDS complement(2323554..2324783) /gene="opdO" /locus_tag="PA2113" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="pyroglutatmate porin OpdO" /protein_id="NP_250803.1" /db_xref="GeneID:879972" /translation="MHPTPRLAAALLAGSGLGWPLLAQADLVEDSHASLELRNFYFNR DFRQSGARDNADEWAQGFLLRLESGFSEGTVGFGVDAIGLLGFKLDSGSGSGGTGLLP ADGSAGGSQDDYAKLGLTAKARVSNSLLKVGALHFKSPLVSANDTRLLPELFRGALLD VQEIDGLTLRGAHLDRNKLNSSSDYQVFSANRIGGRSDAFDFAGGDYRLTPALTASLH QGRLKDIYRQTFAGLVHTLDLGGQRSLKSDLRFARASEDGGFRELDNRAFGALFSLRL GAHAVAAGYQRISGDDPYPYIAGSDPYLVNFIQIGDFGNVDERSWQLRYDYDFGALGL PGLSFMSRYVSGDNVARGAANDGKEWERNTDLGYVVQSGPLKNLGVKWRNATVRSNFA NDLDENRLILSYSLALW" misc_feature complement(2323563..2324711) /gene="opdO" /locus_tag="PA2113" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene complement(2324808..2326079) /locus_tag="PA2114" /db_xref="GeneID:879899" CDS complement(2324808..2326079) /locus_tag="PA2114" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_250804.1" /db_xref="GeneID:879899" /translation="MTLDAGPDASRDGHFGWYRALDKQERRAFWSCKIGYGLDGMDTQ MLSFVIPTLIALWGIGTGEAGFIHTMTLLASAAGGWIAGILSDRIGRVLTLQLTVLWF AFFTFLCGLAQNYEQLLVARTLMGFGFGGEWTAGAVLIGEVIKARDRGKAVGLVQSGW AIGWGLTAILYSLMFSLLPPEEAWRALFMLGLLPALFVLVVRRLVKEPEIYREARQRN QGADKVSFYEIFAPGMLSITLRASLLTTGALGGYYAITAWLPTFLKTERGLTVLGTSG YLAMVILGSYVGYVVSAFLTDLIGRKKNFVLFAVGSFTVVLLYTQLPVSNGAMLWLGF PLGFFASGIFSGMGSFLTELFPTRIRGSGQGFCYNAGRAIAALFPMLIGMLGQKLSLG LGIGAFAAVSYGVVILAALSLPETRGKQLEL" misc_feature complement(2324832..2325995) /locus_tag="PA2114" /note="Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; Region: MFS_MucK; cd17371" /db_xref="CDD:340929" misc_feature complement(order(2324955..2324957,2324964..2324969, 2324976..2324981,2324988..2324990,2325036..2325038, 2325048..2325050,2325060..2325065,2325213..2325215, 2325225..2325227,2325309..2325311,2325318..2325326, 2325333..2325338,2325345..2325347,2325588..2325590, 2325597..2325602,2325609..2325611,2325669..2325671, 2325678..2325686,2325690..2325695,2325843..2325845, 2325939..2325941,2325948..2325953,2325960..2325965)) /locus_tag="PA2114" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340929" gene 2326334..2327287 /locus_tag="PA2115" /db_xref="GeneID:879162" CDS 2326334..2327287 /locus_tag="PA2115" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250805.1" /db_xref="GeneID:879162" /translation="MNLKFLETFVWVARLKSFRLTAEKLFSTQASISSRIAVLEDELG VKLFVRDSRGVTLTPEGDKVLAYAERMMDTMHALKQSLDTGASTQGRIRIGAMDTVIH TWLSPLVARVTETFPAVEIELMADTARNLSEQLQKGYLDLIFQTDSLRHESVLNLELG SYPLRWIVSTGSIYHRDYASLADLARERVVTFSKHSRPHQDVLGLLHANGVAAPRLNC VNSVAAMTRLLRDGFGVGALPPALVSQELERGELTLLRLGPPPPNLPVVVSWRGGTGL ELVDEVVELSKAVLADYAANVGPECMLLAPLKKGVGRLRSR" misc_feature 2326334..2327209 /locus_tag="PA2115" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 2327394..2328191 /locus_tag="PA2116" /db_xref="GeneID:878087" CDS 2327394..2328191 /locus_tag="PA2116" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250806.1" /db_xref="GeneID:878087" /translation="MPEPTFHELAQLPPPVLRQLIRRGDYTGHTSGLGQRHLQANLVI LQKSWADEFLRFCALNPRACPLLDVSEPGSPHFARLGADIDVRSDLPRYRVHRRGQEP VEVSDIGTFWEADFVAFAIGCSFSFEQALLDAGIGLRHLELGRNVTMYRSSIATRPSG RLAGPTVVSMRPLKAAEAIRAIQVTSRFPMTHGAPLHLGDPALIGIRDLARPDYGDPV PLAADEIPLFWACGVTPQAVLAEVQPELYISHAPGHMLVSDRLYDEL" misc_feature 2327406..2328188 /locus_tag="PA2116" /note="Uncharacterized conserved protein YcsI, UPF0317/DUF1446 family [Function unknown]; Region: YcsI; COG4336" /db_xref="CDD:443477" gene complement(2328176..2329156) /locus_tag="PA2117" /db_xref="GeneID:879932" CDS complement(2328176..2329156) /locus_tag="PA2117" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250807.1" /db_xref="GeneID:879932" /translation="MAFKRIALAYCVQLDRVISIASARREYFSQAEPRKRFDFLCSSE GCRAQGIKVSASNYDKLPQDTRKAAHFSKFPHSTHLPNCEWFVEDDEDALRPGESAEE AGQRRIRDKLDAYVEEFDPAIAEEAAPPPADPDAEEQPPASAAVRADAPAAPRQRTQR RRRTRDFEQLVDTFRQARAELPAEEFKQLDIRISGLGRIPLRAYFQHIGYATPGSAGK VFYGGADLVRRYGAPSRPQGFRFKFRDRIDGKPVFLYVAPETLQGYPHRRYLEDILGC AETVRYFTLYALGRLIEAPSGKSYSLEPDALRHLAIIPGPAKDDASQSSS" gene 2329348..2330424 /gene="ada" /locus_tag="PA2118" /db_xref="GeneID:879834" CDS 2329348..2330424 /gene="ada" /locus_tag="PA2118" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="O6-methylguanine-DNA methyltransferase" /protein_id="NP_250808.1" /db_xref="GeneID:879834" /translation="MSQQPDPCNAYHTDEQRWAAVLARDAAADGAFVYAVKTTGVYCR PSSSARRPRRENVEFFATAEAAEAAGYRPSRRAAGDRSLAAEQRAERVAQACRMIETA ETPPALEALAARLGMSPFHFHRLFKAETGLTPKAYASAYRARRLRERLGQASASVTEA IYDSGFNSNSRFYESSSQRLGMRPRDYRDGGAGAAIRFAIGQCSLGAILVAQSQRGIC AILLGEEPEPLLRELQDQFPRAQLLGGDADFERLVAQVVGFVESPQLGLDLPLDVRGT AFQERVWQALREIPPGSTASYAQVAERIGAPRAVRAVAQACAANRIAVAIPCHRVVRR DGDISGYRWGVERKRELLRREERD" misc_feature 2329372..2330418 /gene="ada" /locus_tag="PA2118" /note="bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada; Region: PRK15435" /db_xref="CDD:185333" gene complement(2330591..2330833) /locus_tag="PA2118a" /db_xref="GeneID:17373359" CDS complement(2330591..2330833) /locus_tag="PA2118a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719751.1" /db_xref="GeneID:17373359" /translation="MNRAKLYLCCVALLLVPAIAGAATADYVYGMPLDVARVLSVDEA PSDTCQVVRATLVYLDSHGERQVLHYLKQARACSDE" misc_feature complement(2330600..>2330776) /locus_tag="PA2118a" /note="Protein of unknown function (DUF2790); Region: DUF2790; cl12550" /db_xref="CDD:472325" gene complement(2330959..2332059) /locus_tag="PA2119" /db_xref="GeneID:879863" CDS complement(2330959..2332059) /locus_tag="PA2119" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase" /protein_id="NP_250809.1" /db_xref="GeneID:879863" /translation="MSKMMKAAVFIQPGRIELVDKPIPDVGPNDALVRITTTTLCGTD VHILKGEYPVAPGLTVGHEPVGIIEKLGSAVVGYREGQRVIAGAICPNFNSYAAQDGV PSQDGSYLVESGRCACHGYKATAGWRFGNLIDGTQAEYVLVPDAQANLAPIPDGLSDE QVLMCPDIMSTGFKGAENANIRIGDSVAIFAQGPIGLCATAGARLLGASTIIAIDGNA HRLDIARGMGADVTLNFRECDVIEEILKLTGGRGVDASIEALGTQSTFETALRVLKPG GTLSSLGVYSEDLTIPLSAFAAGLGDHRINTALCPGGKERMRRLLNIVASGRVNLGPL VSHEYRLDDIVAAYDLFANQRDNVLKVAIKPH" misc_feature complement(2330965..2332047) /locus_tag="PA2119" /note="NADP(H)-dependent alcohol dehydrogenases; Region: NADP_ADH; cd08285" /db_xref="CDD:176245" misc_feature complement(order(2331076..2331078,2331082..2331084, 2331091..2331093,2331103..2331105,2331115..2331123, 2331133..2331150,2331154..2331174,2331184..2331195, 2331196..2331198,2331202..2331213,2331217..2331219, 2331232..2331237,2331262..2331264,2331376..2331378, 2331427..2331450,2331508..2331513,2331529..2331531, 2331538..2331543,2331616..2331618,2331733..2331735, 2331745..2331750,2331754..2331756,2331760..2331765, 2331772..2331783,2331973..2331975)) /locus_tag="PA2119" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:176245" misc_feature complement(order(2331559..2331561,2331874..2331876, 2331931..2331933,2331937..2331939)) /locus_tag="PA2119" /note="catalytic Zn binding site [ion binding]; other site" /db_xref="CDD:176245" misc_feature complement(order(2331208..2331216,2331277..2331285, 2331355..2331357,2331409..2331414,2331475..2331489, 2331547..2331549,2331559..2331561,2331931..2331936)) /locus_tag="PA2119" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:176245" gene complement(2332392..2332820) /locus_tag="PA2120" /db_xref="GeneID:879989" CDS complement(2332392..2332820) /locus_tag="PA2120" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250810.1" /db_xref="GeneID:879989" /translation="MTSLPLEANAAATLAEWHGLIARRDLSGLPRLLHPDAVFRSPMA HKPYAGAPVVSMILNTVLTVFEDFAYHRQLASADGRSVVLEFSARVGERELKGIDMIR FDDDGRIVDFEVMVRPMSGLQALGEEMGRRLASYLAASKA" misc_feature complement(2332443..2332796) /locus_tag="PA2120" /note="Ketosteroid isomerase-related protein [General function prediction only]; Region: YesE; COG3631" /db_xref="CDD:442849" gene complement(2332968..2333873) /locus_tag="PA2121" /db_xref="GeneID:878089" CDS complement(2332968..2333873) /locus_tag="PA2121" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250811.1" /db_xref="GeneID:878089" /translation="MKLNLQQLDLNLLLVFDALMRERNLSRAAIRLHRSQPAVSNALA RLREQLDQPLFRRAAKGLEPTAAALALYVPVRQALHLLQAGLGSQETFDPHTARTFRL TMNDYAQLRLLPGLVTRLKTLAPRVTLEVRPDEGASIPAQLASGELDLAIDYLYFDEP ELAYRPVGEERLVVIGRQGHPAFRGGLDRAAYEAAQHVSILPRVGRGSPLEIVLGSAR VQRQVQLLVPHYLTIPAIVASTELLGTVPRRLAERFAGSHGLQLADVPFEMAPVQVNL IWHRQQEATPGLQWLREQIVQIEQG" misc_feature complement(2333670..2333831) /locus_tag="PA2121" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(2332980..2333579) /locus_tag="PA2121" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold; Region: PBP2_Nitroaromatics_like; cd08417" /db_xref="CDD:176109" misc_feature complement(order(2333052..2333054,2333253..2333255, 2333364..2333366,2333538..2333540,2333550..2333555, 2333559..2333561)) /locus_tag="PA2121" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176109" misc_feature complement(order(2333157..2333159,2333166..2333171, 2333178..2333183,2333190..2333204,2333286..2333288, 2333475..2333477,2333481..2333495,2333499..2333504, 2333511..2333516,2333520..2333525,2333532..2333537, 2333544..2333549,2333556..2333558)) /locus_tag="PA2121" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176109" gene 2333999..2335135 /locus_tag="PA2122" /db_xref="GeneID:879644" CDS 2333999..2335135 /locus_tag="PA2122" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250812.1" /db_xref="GeneID:879644" /translation="MPTMSFDPQPFRQQYRAAIRPGYNPWLHAGFVLAYGGAWIVFFL SRLEQPSLLEWLTVPAALVFFNWGEYRIHKSLGHHKHPLGRMFYKRHTGDHHSFFVAG QMRYEQARDWRVILFPAWLVVVFSLGALLAWSLLGLLNDNLAALFAATLLLGYLSYEI FHACEHLPPEHPLSRLPWIRHMRRLHELHHRRELMQTHNFNLVFPLMDWCYGTLHWEA ETAEEHAMTRMQHRIEIARGPEATLAYAASPGLWPEWHPSSLRVDGAAGPLPAGARFE EDIHAGGRAGHLSWTVVEYQPGHLWRANARGDRGLHLRLSYECQPSAAGTRFVRTLEY RFDGWSMRLANLFLLRRRIERESEESMHRLRRVAEARIAAAESV" misc_feature 2334689..2335105 /locus_tag="PA2122" /note="Polyketide cyclase / dehydrase and lipid transport; Region: Polyketide_cyc2; pfam10604" /db_xref="CDD:431388" gene 2335172..2336104 /locus_tag="PA2123" /db_xref="GeneID:877612" CDS 2335172..2336104 /locus_tag="PA2123" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250813.1" /db_xref="GeneID:877612" /translation="MNKFAEMTTFVSVVDAHSFSEAARRLGTTKSQVSQRIQQLERRL GRVLLNRTRPLSLTDPGRTYYEHACRLLQELEQAEASVLDADDDLRGQLRLSAPLAFT PRYLAPLLARFAERHPQLRVDVQADDRFVNLQEPRFDMALRMGRLDDSCLVARPITAN RHLLCASPDYLARHGVPQHPEELQAHDGLVYYNREPGGMLCLPVDGEPASFRIRVRMR TDSGHQLLEGARAGLGLAILPSFLAADALLAGELLPVLPGYSPDGGQVSVVYRKTQRT PRKILVLGQFLEEEIGDPAPWDRALIERGLLPPG" misc_feature 2335199..>2335549 /locus_tag="PA2123" /note="DNA-binding transcriptional regulator CynR; Provisional; Region: PRK11242" /db_xref="CDD:183051" misc_feature 2335442..2336032 /locus_tag="PA2123" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(2335472..2335474,2335484..2335486,2335601..2335603, 2335643..2335645,2335649..2335651,2335835..2335837, 2335886..2335888,2335967..2335969) /locus_tag="PA2123" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature order(2335475..2335480,2335490..2335495,2335499..2335504, 2335511..2335513,2335523..2335525,2335529..2335549, 2335730..2335732,2335817..2335831,2335850..2335855, 2335862..2335864) /locus_tag="PA2123" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 2336209..2337846 /locus_tag="PA2124" /db_xref="GeneID:878161" CDS 2336209..2337846 /locus_tag="PA2124" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="dehydrogenase" /protein_id="NP_250814.1" /db_xref="GeneID:878161" /translation="MHQPENPARRTLLAQTVAGSAALALGSLLGGAPGVASATAETPR KAFDGGRIDVLIVGGGSAGAVLARRLSERGDRRVLLLEAGQAYPAWDYPRIIASSDSV GGDPSSDWGYQSQPGAIGHPIHAIRGKVLGGSSAINGAVAIRARREDFARWNLPGWSY DDLLPAFRRLETRQGGDPALHGGDGPLPVRQLSRADLSLMQRAFVDATLANGFKAIAD FDGADANGVGPYPMNVVNGVRVNTGMAYLDNAVRARANLSIRGDALVDRVLFEGKRAV GVRLASGEEIHAGEVILSAGAYGSPAILLRSGVGPADELKALSIPLLADLPVGRRLKD HPFYYNAYAARPERIGAQSPVIGAKLWTHSSRAQNGELDLHITATHLFPAEMSPTGVG FVLAVALTRPQSLGSVRLASRDPAVAPLIDLNFLAEAEDRARLLEGVKLARRIGRSEP LAGLIHAELGPGPEARSDAQIEAAIRATLDTYHHPTSSAPMGRAGERWAVVDLEGRVH GLQGLRVIDASIFPDAISVATNITTIAVAEHLAQRIA" misc_feature 2336365..2337843 /locus_tag="PA2124" /note="Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Region: BetA; COG2303" /db_xref="CDD:441878" gene 2337868..2339316 /locus_tag="PA2125" /db_xref="GeneID:878590" CDS 2337868..2339316 /locus_tag="PA2125" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase" /protein_id="NP_250815.1" /db_xref="GeneID:878590" /translation="MNGHARHWIDGAWLDSAQRGQSFDPASGQPIGTYADGGRAEADA AIAAAVRAFEDGPWKDDHALRAKALEEIAAAFERHADALIDLLALENGKIKPEAAFEV GMVPGKLRYYAGLARSERGASGTPRPDVVSLVLREPMGVAGIIVPWNSPVVLMIRSLA PALAAGTTTVVKMPGQTAQTNAMVARIIAEAPSLPAGAVNIFSESGSEGARRLIDAAE VPVISFTGSSATGRAISAAGARHLKRFGLELGGKTPHLVFDDADLDAALPVLEKSLTV FAGQFCMTGSRLLVQRGVAERLRERLAQRLENLRVGPAADPRSDMGPLIDKANVERVE RAVRQAIAAGARVVVRGGPVTEGELAAGAFYRPTLLEVDDPDLDIVQQETFGPVLTLQ VFEHEEEGVALANRSEYGLAAGVWTRDVARAFRVARKIRAGTVWINDWAKVYDEFEEG GYRQSGLGRLNGVAALDDFVEYKHISLTTGAA" misc_feature 2337931..2339298 /locus_tag="PA2125" /note="Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like; Region: ALDH_PsfA-ACA09737; cd07120" /db_xref="CDD:143438" misc_feature order(2338300..2338314,2338336..2338338,2338381..2338383, 2338387..2338392,2338537..2338548,2338555..2338557, 2338564..2338569,2338609..2338617,2338711..2338713, 2339014..2339016,2339020..2339022,2339098..2339100, 2339212..2339214) /locus_tag="PA2125" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:143438" misc_feature order(2338312..2338314,2338609..2338611,2338702..2338704, 2338711..2338713) /locus_tag="PA2125" /note="catalytic residues [active]" /db_xref="CDD:143438" gene complement(2339352..2339987) /locus_tag="PA2126" /db_xref="GeneID:878585" CDS complement(2339352..2339987) /locus_tag="PA2126" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250816.1" /db_xref="GeneID:878585" /translation="MAQTKTLTERAEALFGELHGLPLAERIEAINRIRRLLHAHSPFA EEPVDCVQWVRAERVAGNDYNPNTVAPPEMRLLRLSIESDGFTQPIVAYPQADGRYEV VDGFHRLRVGSAKGALRQRLHGYLPIAAIRAGREGDSERIAATIRHNRARGVHGVLPM TAIVVTLLKAGWSEADVARELGMDNDEVLRFKQVSGLPELFREHVYSRSWE" misc_feature complement(2339541..2339849) /locus_tag="PA2126" /note="immunoglobulin-binding regulator IbrB activates eib genes; Region: IbrB_like; cd16397" /db_xref="CDD:319255" gene complement(2340414..2341640) /locus_tag="PA2127" /db_xref="GeneID:878618" CDS complement(2340414..2341640) /locus_tag="PA2127" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250817.1" /db_xref="GeneID:878618" /translation="MAGKHYQDADVHAATLSRLRLVFRNFERVCVAFSGGKDSSVTLQ LALDVARELGRSPVDVLFIDLEGQYQATIDHVSEMLGRPDVRPWWVCLPLNLRNASSL EEPYWCCWEPGAEADWVRPLPKQRGVISDPAFFPFYRYRMEFEEFVAGFNAWLAREEP TAFLVGIRSDESLNRYLAVKRRSRAKQCAWTPPGGSAPLAWSARDRANPQAVSFFPIY DWRFEDLWRCVADHGYAYNRLYDQMYRAGVPFSQMRICQPYGDDQRKGLDLFHRIEPR TWFKVVRRVAGANYGARYCRQRFLGYRGGLGLPPSFGTWREYSQFLLRSMPPPLRGIY QRRIERFILWWKQHDYPLAIWPDAGIPALENRRKQPSWRRIALSLLKQDMARSLSFGF SQADIDRLVPGREKRS" misc_feature complement(2340417..2341634) /locus_tag="PA2127" /note="Predicted phosphoadenosine phosphosulfate sulfurtransferase, contains C-terminal DUF3440 domain [General function prediction only]; Region: YbdN; COG3969" /db_xref="CDD:443169" gene 2342493..2343044 /gene="cupA1" /locus_tag="PA2128" /db_xref="GeneID:880862" CDS 2342493..2343044 /gene="cupA1" /locus_tag="PA2128" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="fimbrial subunit CupA1" /protein_id="NP_250818.1" /db_xref="GeneID:880862" /translation="MTRTSNPCAVVLAFAAIAASGTAMAANTITFSGEVTDQTCQVAV NGFTDPTVILDSVPVSALDGAVGRSAGETAFTLQLTDCVAPTADEHFTTLFQATNPSA AGNLVNTAASGATGVALQLLDSVGGNPVDLAGGAAVPAGDIVLANGATSTSYDYAVQY VSEAATVTPGPVLGVVTYTLRYE" misc_feature 2342517..2343041 /gene="cupA1" /locus_tag="PA2128" /note="Pilin (type 1 fimbrial protein) [Cell motility]; Region: FimA; COG3539" /db_xref="CDD:442760" gene 2343132..2343878 /gene="cupA2" /locus_tag="PA2129" /db_xref="GeneID:877904" CDS 2343132..2343878 /gene="cupA2" /locus_tag="PA2129" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="chaperone CupA2" /protein_id="NP_250819.1" /db_xref="GeneID:877904" /translation="MPRHSYRSGRTSALLLVLLASIAQARASVVVTGTRVIYPGEARE KTVQLSNRDAFPNVVQAWVDIDAPDAPPDQADAPFLVNPAVFRMAPDSGQTLRIVYTG QGLPGDRESLFHLNVLQIPPRNSSHADRNQMLLMLRNRLKLFYRPAGIQGRPEDLPGQ LRFALVRRSAGWAVRVDNPSGYYASFASATLSVGQRRWRLRSGMLEPRSHAEWQAETR EALPPGRVRLHALLINDYGAHMDIRHDLSP" misc_feature 2343189..2343869 /gene="cupA2" /locus_tag="PA2129" /note="P pilus assembly protein, chaperone PapD [Extracellular structures]; Region: FimC; COG3121" /db_xref="CDD:442355" gene 2343862..2346480 /gene="cupA3" /locus_tag="PA2130" /db_xref="GeneID:878212" CDS 2343862..2346480 /gene="cupA3" /locus_tag="PA2130" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="usher CupA3" /protein_id="NP_250820.1" /db_xref="GeneID:878212" /translation="MTYRHERRCRTGTALMAGGMALAASAFGHAQPGYEFDDRLLLGS SLGGGDLSRFNQDGRIDPGRYHVDVYLNERFASRSEVSFRANPASGAVEPCLDEDFLR QRLGAKPGDDPRKSGDGRHCAFLGARLPGSRFSLDVARLRLDLSVPQALLDLKPRGYV SPEEWDAGDSMGFVNYDTNLYRSEYRGGESGRSDYAYVGLNSGINLGLWRLRHQSNYT YSRYNGQARRKWNSIRTYAQRALPAWRSELTAGESYTAGNLLGSIGYRGLSLATDDRM LPESLRRYAPQVRGTAATAARVVISQNGRKIREVNVAPGPFVIDDLYDSAYAGDLDVQ VFEADGSVSSFSVPFASVPESMRPGLSRYSFTLGQARQYGDGDDLFADFTYQRGMSNA LTANLGLRVADDYLAMLGGGVLATRFGAFGLNSTYSSARVEDGARKQGWRIGLDYSRT FQPTGTTLTLAGYRYSTEGYRELGDVLGSRDALRHGDTWDSGSYKQRNQFNLLVSQAL GGYGNLYLSGSSSDFYDGKSRDTQLQFGYSNTWGQLSYNLAWSRQTTTYYQEQGDQDP GVELLRRDRRSGQRNDTLTLSVSMPLGSSSRAPTLSAMATRRSGDSRGGSLQTGLNGT LGDERTWSYALSANRDSEVADTTWNGTLQKQAALATVNAGYAQGDRYRQYSGGIRGAL VAHRDGLTLGPSVGDTFALVEAKGASGAAIRGGQGARIDGNGYALAPSLSPYRYNPIS LDPVGIDPDAELLETERKVAPYAGASVRVTFRTLTGHPLLIQARREDGSVLPLGAVVV DDGGAAIGMVGQGGQVYARAENQRGRLLVQWGTARKERCELPYDLAGVSRDQALIRLR GTCRAATTDSNLENAR" misc_feature 2343880..2346441 /gene="cupA3" /locus_tag="PA2130" /note="Outer membrane usher protein FimD/PapC [Cell motility, Extracellular structures]; Region: FimD; COG3188" /db_xref="CDD:442421" gene 2346477..2347838 /gene="cupA4" /locus_tag="PA2131" /db_xref="GeneID:878544" CDS 2346477..2347838 /gene="cupA4" /locus_tag="PA2131" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="fimbrial subunit CupA4" /protein_id="NP_250821.1" /db_xref="GeneID:878544" /translation="MNRTLPLLPALALGVLLGLPASGQATCYRVTSVGSETTTSNTQI RPGEGTAGSWTGACDTCNGSLGLPSVVNVSDESFQPYPTLIASAVAPLTQYGATGGYD PERVFFRCSAGDAVYEMFSTNGDDLYSGYYTGADTVGNDIGLQDAYRTAWPNVLLRLT NVETGETITPIWKERQLSGLDIDSRGFQLVKAKNLAAVRAELYSAPLEAIRYYSPTIL SQPYSYTQPAAYIAIKGPGLTAPTVGQAHVGGNWGGWYSNWPGAIGLYRYVTLKRYPT CAVMTVTPHVQFPSITLAEIDSGGVREAPFELTFKCQSGMTNGTGAGATALGIRVSSG ALAASPALGLVNASGGLSYLLSDRYGEPGIARGVGIRIYRDGTPMTLLANENSAGGSN AEATGWYPAIGGATQANGGSGGIDLYRETFRARLEKLALGSQPGVTAGRVEATAQVVI RVQ" misc_feature 2346549..2347835 /gene="cupA4" /locus_tag="PA2131" /note="Fimbrial protein; Region: Fimbrial; cl01416" /db_xref="CDD:445401" protein_bind 2347254..2347266 /gene="cupA4" /locus_tag="PA2131" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 2347828..2348541 /gene="cupA5" /locus_tag="PA2132" /db_xref="GeneID:880865" CDS 2347828..2348541 /gene="cupA5" /locus_tag="PA2132" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="chaperone CupA5" /protein_id="NP_250822.1" /db_xref="GeneID:880865" /translation="MSSRRALALLAMLCLAPTSEAGVTAERTRLVFVEGQREASLLLV NQNPYPVLVQAWVDDGALDGEPDTALAPFLPLPPVFRLEPGRQRSLRLLATGQAQARD RESLYWLNIYEIPPQATAEAAGRPRLTVTLRTQMKVLYRPHGLHPHAEDAAAELGFAL RDETLRVDNPTPYFVSLAGLALEIGETRLDLPGTLLAPRSQRRLGLPRRVDGGTRGEV AFDWIDDNGVSRQERKALQ" misc_feature 2347876..2348535 /gene="cupA5" /locus_tag="PA2132" /note="P pilus assembly protein, chaperone PapD [Extracellular structures]; Region: FimC; COG3121" /db_xref="CDD:442355" gene 2348538..2349395 /locus_tag="PA2133" /db_xref="GeneID:877931" CDS 2348538..2349395 /locus_tag="PA2133" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250823.1" /db_xref="GeneID:877931" /translation="MNGSPQARQHEHPPAVAASLAGDLRLARRFQAALARGRVRLDWQ AVRHAGHPEWEPLYRETLLRVTAASGEPPLPTQELILALERLGLVRLLDRCVLGTVLD RLNAEPTLRLACNLSRQSAAMDAWWEAVCRWLAARPQVARRLTLELTETAVGERVATR EFIRRLREHGVRIAIDDFGAAHNNLDFVLDARPDVIKIDCRYTREARRSAKGAEVLRH LLALCRELAPCVVLEGLEEDDAFARLPTGDVYLQGNAIAPPMRVEPPLSVRRPKSRAR IEALASRQG" misc_feature 2348619..2349326 /locus_tag="PA2133" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:238923" gene 2349488..2350060 /locus_tag="PA2134" /db_xref="GeneID:880110" CDS 2349488..2350060 /locus_tag="PA2134" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250824.1" /db_xref="GeneID:880110" /translation="MPKSRHFFPVTPTESTMNRAISLPLKGAAWLLLVLALPFANAQD MNKTAPQTFVSEASAAGVAEIEAGKMALEKSTAADVKVFAKQMIDDHGKVNAELRSLA ERKKLEVEDDASLTDKAKATLLDLRDASFDPAYANNQVAAHEKAVELFTQAADNLTDP ELQAFAKTHLPALKHHLEMARALAKAHPSK" misc_feature 2349632..2350036 /locus_tag="PA2134" /note="Domain of unknown function (DUF4142); Region: DUF4142; pfam13628" /db_xref="CDD:433361" gene 2350089..2351453 /locus_tag="PA2135" /db_xref="GeneID:880120" CDS 2350089..2351453 /locus_tag="PA2135" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_250825.1" /db_xref="GeneID:880120" /translation="MSFSLWLLVLGCILLTLGLASAYLRLLPVSTSFIYLLFGLAIGP AGLHAWRSGLADISGWFEHLSEAALLISLFIGGLKLRLPLRSPAWTAAWLLAGPVLLG CILGLTLGAHFLFGLDWGLALLVAAILAPTDPVLASDIQVNHAGDDDRLRYAVSGEAG LNDGIAFPFVIAALLLIGQGGGLPGEFDRSGLDWLLRDVLWAIPLGLLVGYCLGHGLG RLAIHLRARHTDTSVSANDFLALALIALSYVGADALGGWGFLASFAAGIGLRHAEVAT LGRASAPAEAQAAAADVREAGQASGAIEYGADRSEHPKVAAGAVMLDVLSFGNLLERS LEVLLVTLLGAMLYQHWDWRALPLALLLFCVCRPAMVWLLVGRRLMHPAQRRLLGWFG IRGIGSLYYLSYALNQGLPTALAHTASDLVLSLVALSICVHGLSIQPLLMRHARSVSR RDRE" misc_feature 2350107..>2351450 /locus_tag="PA2135" /note="NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism]; Region: NhaP; COG0025" /db_xref="CDD:439796" gene complement(2351906..2352430) /locus_tag="PA2136" /db_xref="GeneID:880253" CDS complement(2351906..2352430) /locus_tag="PA2136" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250826.1" /db_xref="GeneID:880253" /translation="MRPAPEDAADDAFDQREYPIPERLESQRRAWRFERAGLWVLLGV ILLALTGVFAGGPLSSRTLVSDSGRLTLAYERFERSGAASRLRIDLRGAPGTEVGVRL GGGLLQAHSIQSLQPQPLRSHSWRGGLELEGRLDEDGRLSLFLTLLPNQLGEVASRLE FAGESLAFDQFIYP" gene 2352532..2353068 /locus_tag="PA2137" /db_xref="GeneID:880271" CDS 2352532..2353068 /locus_tag="PA2137" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250827.1" /db_xref="GeneID:880271" /translation="MNRRLPGTLLIALCDQSAPNRRGHAAPAQAGRTARTLQRSLPDN PTGRTMVNGENKIVLVLEEHADQLWRIEEFLLDRGYAVLSAASRDEALDHLASDAVID LFLLSEQLEGPLSGSMLIETSLPVRPRMRVILLSDSARVGIDPAAPYPVLLKPVTLEE LGKAIDMVLHSAPVCPGV" misc_feature 2352703..2352999 /locus_tag="PA2137" /note="phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs); Region: REC; cl19078" /db_xref="CDD:473134" misc_feature order(2352973..2352984,2352988..2352990) /locus_tag="PA2137" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:381085" protein_bind complement(2352560..2352572) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 2352566..2352578 /locus_tag="PA2137" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 2353086..2355608 /locus_tag="PA2138" /db_xref="GeneID:880451" CDS 2353086..2355608 /locus_tag="PA2138" /EC_number="6.5.1.1" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="multifunctional non-homologous end joining protein LigD" /protein_id="NP_250828.1" /db_xref="GeneID:880451" /translation="MPSSKPLAEYARKRDFRQTPEPSGRKPRKDSTGLLRYCVQKHDA SRLHYDFRLELDGTLKSWAVPKGPCLDPAVKRLAVQVEDHPLDYADFEGSIPQGHYGA GDVIVWDRGAWTPLDDPREGLEKGHLSFALDGEKLSGRWHLIRTNLRGKQSQWFLVKA KDGEARSLDRFDVLKERPDSVLSERTLLPRHGEAATPAARPARRGKSGGKTPMPEWIA PELASLVEQPPRGEWAYELKLDGYRLMSRIEDGHVRLLTRNGHDWTERLPHLEKALAG LGLQRSWLDGELVVLDEEGRPDFQALQNAFEEGRGENILYVLFDLPYHEGEDLRDVAL EERRARLEALLEGRDEDPLRFSATLAEDPRDLLASACKLGLEGVIGKRLGSAYRSRRS NDWIKLKCQLRQEFVIVGYTEPKGSRRHIGALLLGLYSPDEERRLRYAGKVGSGFTAA SLKKVRERLEPLAVRSSPLAKVPPARETGSVQWVRPQQLCEVSYAQMTRGGIIRQAVF HGLREDKPAREVTGERPAGPPPLRGARKASAGASRAATAGVRISHPQRLIDPSIQASK LELAEFHARYADLLLRDLRERPVSLVRGPDGIGGELFFQKHAARLKIPGIVQLDPALD PGHPPLLQIRSAEALVGAVQMGSIEFHTWNASLANLERPDRFVLDLDPDPALPWKRML EATQLSLTLLDELGLRAFLKTSGGKGMHLLVPLERRHGWDEVKDFAQAISQHLARLMP ERFSAVSGPRNRVGKIFVDYLRNSRGASTVAAYSVRAREGLPVSVPVFREELDSLQGA NQWNLRSLPQRLDELAGDDPWADYAGTRQRISAAMRRQLGRG" misc_feature 2353089..2355602 /locus_tag="PA2138" /note="ATP-dependent DNA ligase; Reviewed; Region: ligD; PRK05972" /db_xref="CDD:235658" gene 2355684..2355898 /locus_tag="PA2139" /pseudogene="unknown" /db_xref="GeneID:880420" gene 2355918..2356157 /locus_tag="PA2140" /db_xref="GeneID:880550" CDS 2355918..2356157 /locus_tag="PA2140" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="metallothionein" /protein_id="NP_250830.1" /db_xref="GeneID:880550" /translation="MNSETCACPKCTCQPGADAVERDGQHYCCAACASGHPQGEPCRD ADCPCGGTTRPQVAEDRQLDDALKETFPASDPISP" misc_feature 2355933..2356064 /locus_tag="PA2140" /note="Prokaryotic metallothionein; Region: Metallothio_Pro; pfam02069" /db_xref="CDD:426585" gene 2356168..2356716 /locus_tag="PA2141" /db_xref="GeneID:881837" CDS 2356168..2356716 /locus_tag="PA2141" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250831.1" /db_xref="GeneID:881837" /translation="MPDLQLADEASRLVAYLRSADLSLITAESCTAGQISAELSAVAG SGKVMEGGFVVYSPAAKLALLGLDPNWLERFNLTSVEVAEAMARAALQRSPASAALAV TGLLGSEAKDGIPPGTVCFAWAFRLPAGLALFSRRERFHGDPARMRREATRWALRRLP EFHQRALRGERALRRPTERKPP" misc_feature 2356183..2356644 /locus_tag="PA2141" /note="Nicotinamide mononucleotide (NMN) deamidase PncC [Coenzyme transport and metabolism]; Region: PncC; COG1546" /db_xref="CDD:441155" gene 2356713..2357573 /locus_tag="PA2142" /db_xref="GeneID:881828" CDS 2356713..2357573 /locus_tag="PA2142" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_250832.1" /db_xref="GeneID:881828" /translation="MSEQRQTLPAQHQDQRPGHESQMQPKPEFVSADYRPAAKLEGKV ALVTGGDSGIGRAVAVAFAREKADVVLVYLDENEDAAKTREIIESLGRQCLAFAGDVA DAGFCRQVVDTLRQKWGRLDVLVNNAGEQHPQARLEDISEEQWEKTFRTNIFGMFQLT KAALPLMGKGGAIINTTSITAYKGNPQLIDYSSTKGAITSFTRSLSMNLVNRGIRVNA VAPGPIWTPLIPSTFSAEKVAHFGADTPMGRPGQPEELAASYVYLACNDSSYVSGQVL HVNGGTVVNG" misc_feature 2356713..2357570 /locus_tag="PA2142" /note="A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous...; Region: Rossmann-fold NAD(P)(+)-binding proteins; cl21454" /db_xref="CDD:473865" misc_feature order(2356761..2356763,2356857..2356859,2356863..2356874, 2356929..2356934,2356938..2356940,2357007..2357015, 2357091..2357102,2357163..2357165,2357178..2357180, 2357238..2357246,2357283..2357285,2357295..2357297, 2357373..2357384,2357388..2357399,2357433..2357435) /locus_tag="PA2142" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:187613" misc_feature order(2356863..2356868,2356938..2356940) /locus_tag="PA2142" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:187613" misc_feature order(2357166..2357168,2357244..2357246,2357283..2357285, 2357295..2357297) /locus_tag="PA2142" /note="active site" /db_xref="CDD:187613" gene complement(2357593..2357781) /locus_tag="PA2142a" /db_xref="GeneID:17373360" CDS complement(2357593..2357781) /locus_tag="PA2142a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719752.1" /db_xref="GeneID:17373360" /translation="MQAFMVHFSDAGQPGRTVLTTFAPTLSTSEAHVRLQLCYPLLFP QRLSAVRVYPLLPAAARE" gene 2358024..2358311 /locus_tag="PA2143" /db_xref="GeneID:881819" CDS 2358024..2358311 /locus_tag="PA2143" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250833.1" /db_xref="GeneID:881819" /translation="MKRDWGLIRDLLEHLESLGFGQHWEARELPGHCREAVAYHLQLL NQAQLLCGSVQHSWTGQEQWVVHHLTLAGHDLLDRLRQESAAAAVPVRKSA" misc_feature 2358027..2358275 /locus_tag="PA2143" /note="Hypothetical protein (DUF2513); Region: DUF2513; pfam10711" /db_xref="CDD:431452" gene 2358364..2360802 /gene="glgP" /locus_tag="PA2144" /db_xref="GeneID:881812" CDS 2358364..2360802 /gene="glgP" /locus_tag="PA2144" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycogen phosphorylase" /protein_id="NP_250834.1" /db_xref="GeneID:881812" /translation="MPDSQDQTPSAVQTLKASILAKLRYSVGRDPSTACPHDWFEAVA LAVRDHIIDHWEEATPQGEAPARKRVYYLSLEFLIGRLLLDNLGNLGLLEETRQALAE LGVDLQRIVALEPDAALGNGGLGRLAACFMESMASLDIPAHGYGIRYEHGLFRQVLTD GWQQEQTETWLDFGNPWEFERPEVSYYIDFGGSVQVDSEHSGRAIWRPDERIRAIAYD TPIVGWRRASVNTLRLWRARAEEDLQLDRFNAGDHIGAVVDVVKAESISRVLYPADST EAGQELRLRQEYFFVSASLQDLLDRHLRHHHDLRSLPEQVAIQLNDTHPAIAVAELMR QLVDVHQLAWPDAWALSVATLSYTNHTLLPEALESWPVALMERLLPRHMQIIYLINAF HIDALRAQDIHDFDLLRSVSLIEEGHGRRVRMGNLAFLGSHQINGVSALHTELMRETV FHDLHRLYPQRISNKTNGVSFRRWLFQANPGLTELLVETLGADLLDTPERRLPDLEEH VEDARLRARFAEQRRQNKTALARLVLDSLGVAIEPEALFDVHIKRIHEYKRQLLNLLH TVALYQEIRNDPTADRVPRVKIFAGKAAASYHQAKLIIKLANDIARTINDDPTVRGLL KLVFLPNYNVSLAEAIIPAADLSEQISTAGLEASGTSNMKFALNGALTIGTLDGANVE MSQRIGLEHMFIFGLSAQQVEQRRQAGELEMGGVIAASPRLEEALEAIRSGLFSADDR SRYEGLVDGLVHDDRFMLCADFEAYWHAQCRVEEVWREPDRWWRSALLNVARIGWFSA DRTISEYARDIWKL" misc_feature 2358661..2360799 /gene="glgP" /locus_tag="PA2144" /note="Carbohydrate phosphorylase; Region: Phosphorylase; pfam00343" /db_xref="CDD:459770" gene complement(2360809..2361207) /locus_tag="PA2145" /db_xref="GeneID:881698" CDS complement(2360809..2361207) /locus_tag="PA2145" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250835.1" /db_xref="GeneID:881698" /translation="MENSDEVRFQHYFISLVEQVAKPLFVDSCEEARSYGLDCNVDLD LDEDGHPRLRLEVGEPGGEKSHYSLLAIPGERVIHRQYLAGAQEWHSLPAELASINPM VLDSELAVFFRRAFDLRLEGPERRHPAGFW" gene 2361706..2361873 /locus_tag="PA2146" /db_xref="GeneID:881691" CDS 2361706..2361873 /locus_tag="PA2146" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250836.1" /db_xref="GeneID:881691" /translation="MAQHQGGKGNFAEDPKRASEAGKKGGQASGGNFKNDPQRASEAG KKGGQRSHGGN" misc_feature <2361727..2361870 /locus_tag="PA2146" /note="General stress protein YciG, contains tandem KGG domains [General function prediction only]; Region: GsiB; COG3729" /db_xref="CDD:442943" gene 2361954..2364083 /gene="katE" /locus_tag="PA2147" /db_xref="GeneID:881554" CDS 2361954..2364083 /gene="katE" /locus_tag="PA2147" /EC_number="1.11.1.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="catalase HPII" /protein_id="NP_250837.1" /db_xref="GeneID:881554" /translation="MSEQNNEQRSQAAGTDTVDRGNSNAKLEQLEAYREDATGEALST NTGTRIADNQNTLKAGERGPSLLEDFIMREKITHFDHERIPERVVHARGSAAHGYFEA YEDLSDLTKAGFLAEAGKRTPVFVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNFDL VGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGASAHDTFWDFVSLTPESAHMVMWL MSDRAIPIAYRNMQGFGVHTFRLVNAAGESVLVKFHWRPKSGTCSLVWDEAQKLAGKD PDFNRRTLWEDIEKGDYPEWELGLQVIPENQQDSFDFDLLDPTKLVPEELVPVRVVGR MVLNRNPDNFFAETEQVAFHVGHVVPGIDFTNDPLLQGRLFSYTDTQLLRLSGPNFNE IPINRPLCPFHNNQRDAPHRQTINRGRASYEPNSIDGGWPKETPPAARNGGFSTYHEP VSGSKLRKRADSFADHFSQAALFWHSMSEAEQAHIVAAYSFELSKVERQSIREREVNQ ILLNIDPQLAARVAANVGVQLAAPANPTPQPKPSPALSQMNLLSGDIRSRKVAILIAD GVAESDVSDLRDALRQEGADAKLIAPSASPVQAENGAELSPEGTWDGLPSVAFDAVFV PGGAASSQAIGADGRGLHYLLEAYKHLKPVAFAGDAQALASQLSLPGDPGVVLGATAT DVFPGLRQALMQHRIWQREAATKAIPA" misc_feature 2361954..2364080 /gene="katE" /locus_tag="PA2147" /note="hydroperoxidase II; Provisional; Region: katE; PRK11249" /db_xref="CDD:236886" gene 2364311..2364802 /locus_tag="PA2148" /db_xref="GeneID:881403" CDS 2364311..2364802 /locus_tag="PA2148" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250838.1" /db_xref="GeneID:881403" /translation="MSAWETLWKILGEEFADLADFEQTARAALRLLLAAALGAVLGYE REQSGKAAGLRTHMLVTLGAALFVMPLQLQSGGADALSRVIQGTVAGIGFLCAGTILK AGRESRVRGLTTAAGLWASTAIGVAVGLGHQGTAVLGTVLALLVLHVLACLNRSPPSS DSH" misc_feature 2364437..>2364730 /locus_tag="PA2148" /note="Magnesium uptake protein YhiD/SapB, involved in acid resistance [Inorganic ion transport and metabolism]; Region: SapB; COG1285" /db_xref="CDD:440896" gene 2364816..2365058 /locus_tag="PA2149" /db_xref="GeneID:881390" CDS 2364816..2365058 /locus_tag="PA2149" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250839.1" /db_xref="GeneID:881390" /translation="MFKDFDACTAWTDAMQERCQPVGLILYQPKRRGAAVRMLWVVTP GCSCLSDAETAADNLLQRITDIAADGRVRYADGGTL" gene 2365081..2365962 /locus_tag="PA2150" /db_xref="GeneID:881375" CDS 2365081..2365962 /locus_tag="PA2150" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="non-homologous end joining protein Ku" /protein_id="NP_250840.1" /db_xref="GeneID:881375" /translation="MARAIWKGAISFGLVHIPVSLSAATSSQGIDFDWLDQRSMEPVG YKRVNKVTGKEIERENIVKGVEYEKGRYVVLSEEEIRAAHPKSTQTIEIFAFVDSQEI PLQHFDTPYYLVPDRRGGKVYALLRETLERTGKVALANVVLHTRQHLALLRPLQDALV LITLRWPSQVRSLDGLELDESVTEAKLDKRELEMAKRLVEDMASHWEPDEYKDSFSDK IMKLVEEKAAKGQLHAVEEEEEVAGKGADIIDLTDLLKRSLRSRAGGGKDKGSEKAGA DAKGRAKSGASRSRRKA" misc_feature 2365081..2365932 /locus_tag="PA2150" /note="Non-homologous end joining protein Ku, dsDNA break repair [Replication, recombination and repair]; Region: YkoV; COG1273" /db_xref="CDD:440884" gene 2366106..2368100 /locus_tag="PA2151" /db_xref="GeneID:881366" CDS 2366106..2368100 /locus_tag="PA2151" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase" /protein_id="NP_250841.1" /db_xref="GeneID:881366" /translation="MSSIVRNSDDDPLVIAIQQPRIAIESVSPVVEEGAYPAKTESDR DLRLAARIFADGHEVLGAEVVWRRVGETAERRLPLLPEGNDFWSAQLRTPPCGRLYFR IEAWIDRFAGYRRELRAKHGARLPLDLELREGDELLQRCAERGGPEIAAACAPLAERL QACQSVEERVALWLAAQTGELLRLVGPREHLVRSREYPVEVERPLARFASWYELFPRS ESGDPTRHGTFDDVIRRLPQIAAMGFDVLYFPPIHPIGRTHRKGRNNSLRAEAGDPGS PYAIGSEEGGHEAIHPELGDREDFRRLLVAVREHGMELALDFAIQCSPDHPWLREHPG WFAWRPDGSLRYAENPPKKYEDIVNVDFYAEQALPSLWEALRDVVLGWVEQGVTLFRV DNPHTKPLPFWEWLIAEVRGRHPQVIFLSEAFTRPAMMARLGKVGFSQSYTYFTWRND KQELAEYFAELNQPPWRDCYRPNFFVNTPDINPWFLQRSGRPGFLIRAALATMGSGLW GMYSGFELCEAAALPGKEEYLDSEKYQLRPRDYQAPGNIVAEIARLNRIRRENPALQT HLGFQAYNAWNDRILYFGKRTADLANFVLVAVCLDPHEAQEAHFELPLWEFGLPDDAS LQGEDLMNGHRWVWHGKVQWMRIEPWHLPFGIWRVRRVDA" misc_feature 2366163..2366714 /locus_tag="PA2151" /note="Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S; Region: GlgE_dom_N_S; pfam11896" /db_xref="CDD:463388" misc_feature 2366727..2367791 /locus_tag="PA2151" /note="Alpha amylase catalytic domain found in GlgE-like proteins; Region: AmyAc_GlgE_like; cd11344" /db_xref="CDD:200482" misc_feature order(2366886..2366888,2366898..2366900,2366931..2366933, 2366937..2366939,2367066..2367068,2367162..2367167, 2367171..2367176,2367276..2367278,2367282..2367287, 2367369..2367371,2367543..2367545,2367702..2367707) /locus_tag="PA2151" /note="active site" /db_xref="CDD:200482" misc_feature order(2367120..2367128,2367147..2367155,2367192..2367194, 2367291..2367302,2367306..2367308,2367315..2367317, 2367381..2367383,2367387..2367392,2367399..2367401, 2367411..2367413) /locus_tag="PA2151" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:200482" misc_feature order(2367282..2367284,2367369..2367371,2367543..2367545) /locus_tag="PA2151" /note="catalytic site [active]" /db_xref="CDD:200482" misc_feature order(2367378..2367386,2367435..2367437,2367444..2367449) /locus_tag="PA2151" /note="acceptor binding site [chemical binding]; other site" /db_xref="CDD:200482" gene 2368111..2371413 /locus_tag="PA2152" /db_xref="GeneID:881356" CDS 2368111..2371413 /locus_tag="PA2152" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="trehalose synthase" /protein_id="NP_250842.1" /db_xref="GeneID:881356" /translation="MARREKPVFLNDPQWYKDAVIYQVHVKSFYDANNDGIGDFAGLI EKLDYIADLGVNTLWLLPFYPSPRRDDGYDIAQYRGVHSDYGSLADARRFIAEAHRRG LRVITELVINHTSDQHPWFIRARHAKKGSRARDYYVWSDSDEKYQGTRIIFIDTEQSN WTWDPVAQQYYWHRFYSHQPDLNFDNPQVLREVLGVMRYWLDMGVDGLRLDAIPYLIE RDGTSSENLPETHQVLKRIRAELDAHYPDRMLLAEANQWPEDTRPYFGGEDGGEGDEC HMAFHFPLMPRMYMAIAQEDRYPITDILRQTPDIPANCQWAIFLRNHDELTLEMVTDD ERDYLWNHYAADRRARLNLGIRRRLAPLVERDRRRIELLHSLLLSMPGTPTLYYGDEI GMGDNIYLGDRDGVRTPMQWSVDRNGGFSRADPAKLVLPPILDPLYGYQTINVEAQAR DPHSLLNWMRRLLAVRSQQKAFGRGSLKMLAPSNRRILAYLREYAEGERQDSILCVAN LSRAAQAVELDLASHAGKVPVEMIGGMSFPPIGELTYLLTLPPYGFYWFYLADATQMP SWHVAADERLPELPTLVVKQRLGELLQGASRNILEGETLPAYLPKRRWFAGEKGQPRL CYIVPLDEAEPRCALCEVEIDGLRYQLPLGFLDADQRGDSLPQLLALARLRRGRKVGL LTDAASLPLFARKVLAQLRAEAVIAHGDGEIQFIPAAGLAEMDDIADEDVLPFSVEQS NSSIRFGERMVLKVLRKILPGLHPEIEVGGYLTRHGYPGIAPLLGEVRRVGADGEPHT LMILQGYLNNQGDAWNWTLDNLERAVRDEISAASEALEGQYDSLAELRGFAANLGARL GEMHSVLAGESDDPAFGSRESDEASVQAWALRIAEQLREAGKRLSEPPRPLQGEAAEQ ARRLLERLPALLERLPLLARQAAGGLLIRVHGDLHLGQVLMVQGDARFIDFEGEPARS LEERRQRHSPMKDVGGMLRSFDYAAAMVLRNAQSTDSSEQADSARRKVAMRYRSEARD AFLAGYRAAAAGLMHAWHGREGEGAALALACLEKAAYELLYEADYRPDWLEVPLAGLA ELTEHLLKGKNR" misc_feature 2368150..2369787 /locus_tag="PA2152" /note="trehalose synthase; Region: treS_nterm; TIGR02456" /db_xref="CDD:274140" misc_feature 2369833..2371380 /locus_tag="PA2152" /note="trehalose synthase-fused probable maltokinase; Region: TreS_Cterm; TIGR02457" /db_xref="CDD:274141" gene 2371410..2373608 /gene="glgB" /locus_tag="PA2153" /db_xref="GeneID:881350" CDS 2371410..2373608 /gene="glgB" /locus_tag="PA2153" /EC_number="2.4.1.18" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="1,4-alpha-glucan branching protein GlgB" /protein_id="NP_250843.1" /db_xref="GeneID:881350" /translation="MSEPMSERERWQLELDKLQRGLQGDPFAFLGPQRDPGGEGGVLR AYLPGAQRVELLDEDGATLAELEQSDPGSGLFQRHLERLPPRYRLRVHWPDGVQESED PYAFGPLLGELDLYLFAEGNHRQLASCLGAQLTRHEGVEGVRFAVWAPNAVRVSVVGD FNGWDGRRHPMRRRYPSGVWELFVPRLGEGELYKYELQGHDGLLPLKADPLALACETP PGTASKTCAALRHEWRDQDWLARRAERQGYAAPLSIYEVHAGSWRHRDGRPPHWSELA EELIPYVRQLGFTHIELMPVMEHPFGGSWGYQPLGLFAPTARYGTPEDFAAFVDACHQ AGIGVILDWVPAHFPTDAHGLGRFDGTALYEYEHPFEGFHQDWDTYIYNLGRSEVHGF MLASALHWLRTYHVDGLRVDAVASMLYRDYSRKEGEWLPNRHGGRENLEAIDFLHHLN QVVASETPGALVIAEESTAWPGVSRPVAEGGLGFSHKWNMGWMHDSLAYIGEDPLHRR YHHHQLTFGLLYAFSEHFILPISHDEVVHGKHSLLDKMPGDRWQKFANLRLYLSFMWS HPGKKLLFMGCEFGQWREWNHDGELDWYLLRYPEHQGVQDLVAALNRLYRELPALHAR DGEALGFEWLIGDDQANSVYAWLRHAAGEPSLLAVHNFTPVPRQGYRIGVPQGGDWDV LLNSDAQAFAGSGAGSQGRVSSESCGAHGQAQSLVLDLPPLGTLLLRPAG" misc_feature 2371449..2373605 /gene="glgB" /locus_tag="PA2153" /note="1,4-alpha-glucan branching protein GlgB; Region: PRK05402" /db_xref="CDD:235445" misc_feature order(2372637..2372639,2372643..2372648,2372802..2372804, 2373003..2373008) /gene="glgB" /locus_tag="PA2153" /note="active site" /db_xref="CDD:200461" misc_feature order(2372643..2372645,2372802..2372804,2373006..2373008) /gene="glgB" /locus_tag="PA2153" /note="catalytic site [active]" /db_xref="CDD:200461" gene complement(2373610..2374605) /locus_tag="PA2154" /db_xref="GeneID:881342" CDS complement(2373610..2374605) /locus_tag="PA2154" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250844.1" /db_xref="GeneID:881342" /translation="MNGSGHEATSTPPRRSHWRWLRRLLTLAFFVLVPVLLFLLVKNL DWQEVRHALGEYRPATLFLGLLLAAAGYTVFSSFDLLSRYYIGHSLPKRRVFTVAFVC NAFNLNLSSWVGAVALRYRLYSRLGLDIADITRILTFSLVTNWFGYLLLAGILFSCGL PALPPGWKLGSDGLRLIGALLLALAAGYLLACRFARRRAWGWREHRLTLPSWRLAALQ GLLGASNWSLMALLLYSLLPHSVDYPSVLAILLISSIAGVITHIPAGLGVLEAVFIAL LQGRLSQGVLLAALIGYRVLYFLLPLALACVVYLLLERRAIRLRRKQRRLRQGQA" misc_feature complement(<2373655..2374554) /locus_tag="PA2154" /note="bifunctional lysylphosphatidylglycerol flippase/synthetase MprF; Region: bifunc_MprF; NF033480" /db_xref="CDD:468043" gene complement(2374602..2375807) /locus_tag="PA2155" /db_xref="GeneID:881323" CDS complement(2374602..2375807) /locus_tag="PA2155" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cardiolipin synthase 2" /protein_id="NP_250845.1" /db_xref="GeneID:881323" /translation="MNFPWRDGNRVELLINGEEYFPRLFQCIAEARREILLETFIIFE DEVGRQLQEALSAAAERGVEVQVTVDGYGTASLSPDYLARLTASGVRVHLFDPRPRLL GMRTNLFRRLHRKLVVIDRRQAFVGGINYGEDHLVRRGNMAKQDYAVRVEGPVVRDIR QACLALLEPDADYPPLRPSGAGQPARVRLVIRDNDQSSDDIEREYLQAIRQARRRLLI ANAYFFPGYRLLRELRDAARRGVRVDLVLQGMPDMPLVRLCSRLLYDYLLREGVRIHE YCQRPLHGKVAVIDDDWSTIGSSNLDPLSLSLNLEANLVIRDVAFNGQLYQHLRELAR RHCRRISRRHARRGYWWRAPLIFLGFHFSRHFPAIAGWVPAHLPRLKSLEPRPSRRWQ ERQGQRGNP" misc_feature complement(2374605..2375804) /locus_tag="PA2155" /note="cardiolipin synthase ClsB; Region: PRK11263" /db_xref="CDD:236888" gene complement(2375804..2376541) /locus_tag="PA2156" /db_xref="GeneID:881314" CDS complement(2375804..2376541) /locus_tag="PA2156" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250846.1" /db_xref="GeneID:881314" /translation="MILPRLQVLTVNTHKGFNPFNRRFILPELREAVRSVGADLVFLQ EVLGSHSLHAARLPSWPPAPQYEYLADSMWPQFAYGRNAVYPEGHHGNAVLSKHPILA HRNLDVSVAGNEERGLLHAVIDIGRPLHAVCVHLGLREAQRQRQLQLLCELVAGLPER EPVVVAGDFNDWRQRADRLLAGCGLREVFVGAQGRPARSFPARWPVLPLDRIYLRNAR GRQPRILSRRPWSHLSDHLPLAVEVEP" misc_feature complement(2375810..2376532) /locus_tag="PA2156" /note="Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family [General function prediction only]; Region: ElsH; COG3568" /db_xref="CDD:442789" gene complement(2376538..2377476) /locus_tag="PA2157" /db_xref="GeneID:881303" CDS complement(2376538..2377476) /locus_tag="PA2157" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250847.1" /db_xref="GeneID:881303" /translation="MSAPARLRIGISGWRYAPWRGDFYPEGLRQKDELRFASRAVNSI EINGTFYALQTPERFRGWAEDTPEDFVFSVKAPRYITHVRRLREIDEPLANFFASGPL ALRQRLGPFLWQFPPSMRFDRELFADFLARLPRDGAAAQKLARHSAARLHREGYLDGD PAQRLRHAVEIRHESFVDPTFIELLREYRVALVVADTAGKWPLLGDVCADFLYLRLHG DKELYRSGYSEAALGQWQARIRAWAGGGQADDLRRASQDAPAKATARDLYCYFDNDVK VRAPYDARRLLQLLELDGGLRTVPGQLPDDLRESAA" misc_feature complement(2376595..2377461) /locus_tag="PA2157" /note="Sugar isomerase-related protein YecE, UPF0759/DUF72 family [General function prediction only]; Region: YecE; COG1801" /db_xref="CDD:441406" gene complement(2377480..2378727) /locus_tag="PA2158" /db_xref="GeneID:881293" CDS complement(2377480..2378727) /locus_tag="PA2158" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase" /protein_id="NP_250848.1" /db_xref="GeneID:881293" /translation="MKAVVFHDIGDIRLEDVAEPRLQEPTDAIVRLTASAICGTDLHF VRGSVGGMRPGTILGHEGVGIVEALGDEVRNLQVGDRVVIPSTIACGNCVYCRAGYYA QCDVANPGGSQAGTAFFGGPRANGGFHGLQAEKARIPYANIGLIRLPSSISDDQAILL SDIFPTGYFGAELAGIAPGNTVAVFGCGPVGQFAIASALLLGAARVFAIDRHPDRLHM ARQQGAEVIDFEREDPVQALRWLTAGIGVDRAIDAVGVDAEHSHGTATPAPRQEGTSW SPGNAPAQALEWAVQGLAKAGTLSIIGVYAEDSRQFPIGLAMNRNLTIRMGNCHHRKY IPLLLEHVLSGRIDPAKILTQVKPIGDAIEAFEAFDRRETGWIKVELVPQKRQVEGSE ERLDERAVDELARRPTPESGARG" misc_feature complement(2377579..2378727) /locus_tag="PA2158" /note="Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1; Region: FDH_like_1; cd08283" /db_xref="CDD:176243" misc_feature complement(order(2377621..2377623,2377741..2377749, 2377816..2377824,2377873..2377875,2377963..2377971, 2378041..2378043,2378083..2378085,2378095..2378103, 2378158..2378166,2378170..2378175,2378230..2378232, 2378242..2378244,2378470..2378472,2378599..2378601, 2378608..2378616)) /locus_tag="PA2158" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:176243" misc_feature complement(order(2378242..2378244,2378548..2378550, 2378608..2378610,2378614..2378616)) /locus_tag="PA2158" /note="catalytic Zn binding site [ion binding]; other site" /db_xref="CDD:176243" misc_feature complement(order(2378416..2378418,2378440..2378442, 2378449..2378451,2378455..2378460)) /locus_tag="PA2158" /note="structural Zn binding site [ion binding]; other site" /db_xref="CDD:176243" gene complement(2378794..2379210) /locus_tag="PA2159" /db_xref="GeneID:881284" CDS complement(2378794..2379210) /locus_tag="PA2159" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250849.1" /db_xref="GeneID:881284" /translation="MKISDIMTRNVQVADPQQSIREAAATMARIDSGALLVGEGDRLV GMITDRDIAIRAVAGGLSGDTPLGRIMSGDIHYCFEDEDVQHVARNMADIQMRRLPVL NREKRLVGVVSLGNIASCRDQASSATVLQGVAQAHY" misc_feature complement(2378857..2379192) /locus_tag="PA2159" /note="CBS pair domain found in Hypoxic Response Protein 1 (HRP1) -like proteinds; Region: CBS_pair_HRP1_like; cd04622" /db_xref="CDD:341390" misc_feature complement(order(2378863..2378868,2378872..2378874, 2378878..2378880,2378917..2378919,2379103..2379111, 2379175..2379183,2379187..2379189)) /locus_tag="PA2159" /note="putative ligand binding site II [chemical binding]; other site" /db_xref="CDD:341390" misc_feature complement(2378998..2379189) /locus_tag="PA2159" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341390" misc_feature complement(order(2378866..2378868,2378911..2378919, 2378983..2378985,2379049..2379051,2379058..2379063, 2379073..2379075,2379109..2379111)) /locus_tag="PA2159" /note="putative ligand binding site I [chemical binding]; other site" /db_xref="CDD:341390" misc_feature complement(2378857..2378985) /locus_tag="PA2159" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341390" gene complement(2379310..2381460) /locus_tag="PA2160" /db_xref="GeneID:881269" CDS complement(2379310..2381460) /locus_tag="PA2160" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycosyl hydrolase" /protein_id="NP_250850.1" /db_xref="GeneID:881269" /translation="MSRKRSPAPSRISEGHPFPLGATWDGLGVNFALFSAHATKVELC LFDARGEKEIERIELPEYTDEIWHGYLPDAHPGQIYGYRVHGPYEPDAGHRFNPNKLL LDPYAKQLVGRLRWSEALFGYTIGSADADLSFDERDSAPFVPKSKVIDPAFTWAERPP VRVPWDRTVIYEAHLRGLSMRHPQVPEAVRGTFAGLMNADLLAHIRRLGVTSVELLPI HGFVDDKHLLENGMSNYWGYNSIAFFAPHPAYLASGQVNEFKEMVAHLHDAGLELILD VVYNHTAEGNELGPTLCMRGIDNASYYRLMPDQRRYYINDSGTGNTLDLSHPCVLQMV TDSLRYWATEMRVDGFRFDLATILGRHPDGFDERHGFLVACRQDPVLSKCKLIAEPWD CGPGGYQVGGFPPGWAEWNDRFRDCVRAYWRGDDGMLPELARRLTASGDLYDQRGRRP YASVNFVTAHDGFTLRDVVSYDHKHNEANGENNADGSDHNLSWNHGCEGPTDDPEIRA LRLRQMRNLLSTLLLSQGTPMLVAGDEFSRTQQGNNNVYCQDNELGWIDWRLDDEGRS LLAFTQRLLALRQRYPILRRGRFLVGEYNEALGVKDVTWLAPGGEEMTEEHWHDEHAR CLGVLLDGRAQPTGILRSGEDATLLLILNAYHDAVSFRLPEVAEGSGWTCLLDTQRPE DPLGERYPFASEFLVGGRSFLLFELQPPGAGAEG" misc_feature complement(2379343..2381433) /locus_tag="PA2160" /note="Pullulanase/glycogen debranching enzyme [Carbohydrate transport and metabolism]; Region: PulA; COG1523" /db_xref="CDD:441132" gene complement(2381473..2381778) /locus_tag="PA2161" /db_xref="GeneID:878892" CDS complement(2381473..2381778) /locus_tag="PA2161" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250851.1" /db_xref="GeneID:878892" /translation="MSADEKRIREFAYQIWESEGCPDGQAERHWAMARQLAEAEAAAA APKKTRGRAKAAKETPALLQAPAAKPRKPRAASPARPASEKPAAAKPRSRRKPEAGE" misc_feature complement(2381671..2381772) /locus_tag="PA2161" /note="Protein of unknown function (DUF2934); Region: DUF2934; pfam11154" /db_xref="CDD:463231" misc_feature complement(<2381482..2381625) /locus_tag="PA2161" /note="N-terminal helicase domain of the DEAD-box helicase superfamily; Region: DEAD-like_helicase_N; cl28899" /db_xref="CDD:475120" gene complement(2381775..2384555) /locus_tag="PA2162" /db_xref="GeneID:880963" CDS complement(2381775..2384555) /locus_tag="PA2162" /EC_number="5.4.99.15" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="malto-oligosyltrehalose synthase" /protein_id="NP_250852.1" /db_xref="GeneID:880963" /translation="MIEPRATLRLQFHAGFTLDDALPWLDYFADLGISHLYASPLFRA RPGSSHGYDVVDPTRINPELGGEPALLRLIQGLRQRGMGLLMDIVPNHMGIGGGANPW WQDVLEWGRESPYANFFDIQWESHDAALRGQVLLPFLRSDYGEVLAAGEIGLSLDREA GRLLASHGEQRFPLWPGSYPELLEDSGEPRLSALAGGFRECRQDREALREMQRQLAAA LAESAPRAALQRTLGELQERHEEARQRLHRLLEAQHYRLASWRTAADDINWRRFFDIS ELVGLRVERGEVFEAVHGKVFQLLEDGLLDGLRIDHVDGLADPRGYCRRLRRRSERIR AHRGGAPMLLYVEKILGGEERLPEDWLCDGTTGYDFMNQVSLLQHDPRGERPLRELWQ RVSGRPEAFLDEVYQARQLVLAGSLAGDLENLAQGLLRVARADLASRDLTLGGIRRAL FQLLARFPVYRTYAGACGRSVQDREVFRYAAEAAREDLDEADRAVLDHLERWLGGQPL RELPPGPLRRLRGELLARFQQLSSPTAAKAVEDTACYRSAALLSRNDVGFDPQRFAAS AEEFHAACEARRLASPRALLATASHDHKRGEDARARLAALSELAPWFARNVEHWQSLA TPLRRDLAEGPAPSPGDELILFQALLGSWPLDAPCDGAALDQAFLARMREWQCKALRE AKLRTRWTAPDEDYERACADYLEQLLRAPLAQALRQSLGNAAARLMPAGALNGLAQCL LRLTCPGIPDLYQGREDWDFSLVDPDNRRPVDFARHAAALAAPTPFPELLEHWRDGRI KQTLIARVLGLRRMQPGLFRDGDYLPLEVSGEHAERVLAFARRSRHGCLLVVVPRLAC ALLGHATQPQVPAEAWGDTCLLLPPSLSECTYSGLFSTMPLPSDGHLSLSEVLADFPV NLLYRLAQEDTP" misc_feature complement(2381799..2384555) /locus_tag="PA2162" /note="Maltooligosyltrehalose synthase [Carbohydrate transport and metabolism]; Region: TreY; COG3280" /db_xref="CDD:442511" gene complement(2384548..2386602) /locus_tag="PA2163" /db_xref="GeneID:880953" CDS complement(2384548..2386602) /locus_tag="PA2163" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="4-alpha-glucanotransferase" /protein_id="NP_250853.1" /db_xref="GeneID:880953" /translation="MSDARLAELAAAVGLQLDWQDANGRPQRVDPEVQRGLLEALGYP AQSPQQIEQSLAALARLREDSANLGLLVGECGQPLEQALGPAGTPGELVYEDGTRIAL RLDAEGRLPAQARSGYAQLSLEQREWAVAMAPPSCPSLASLAPGRSRRWGLAAQVYAL RRPGDGGLGDSAALEDLLRSAARHGADALAISPLHALAEANGHAYSPYSPSSRLFFNV LHAAPATILGAAAVEQAIRRAGLAAEMARLESLELIDWTAAADLRMRLLRQLHRDFTE RASPLRHDLAEFRREAGEALLHHCRFETLQAHLGAGPDWRRWPEPLRRPGEPAVAAFC ADHAEEVDFRAFGQWLTQRCLQHAQRQAREAGMAIGLVADLAVGADGGGSQAWSRQEE LLAEVNVGAPPDILNQSGQDWGVSAFNPEGLRRHGYRAFREMLRANLAWPGGLRIDHV MGLQRLWLIPRGQPPHAGAYLRYPQRELLRLLALEASRASALVIGEDLGTVPEGLREE LARRQVLGTRVLLFERRGERFVPPAQWPADAMATTSTHDLPSLSGWWRGRDIHWRGRA GHRSAEECAADLELRAEERRALAASLEPPVDPDPAAEVPLDACIGYVGATPAPLVLLP LEDALGSLEQPNLPGPGDAHPNWRRRWPENAAQMLGTPQVDRRLRLLERSRRDAEEAA HD" misc_feature complement(2384608..2386158) /locus_tag="PA2163" /note="4-alpha-glucanotransferase [Carbohydrate transport and metabolism]; Region: MalQ; COG1640" /db_xref="CDD:441247" protein_bind complement(2384976..2384988) /locus_tag="PA2163" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(2386595..2388346) /locus_tag="PA2164" /db_xref="GeneID:880986" CDS complement(2386595..2388346) /locus_tag="PA2164" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycosyl hydrolase" /protein_id="NP_250854.1" /db_xref="GeneID:880986" /translation="MAIRRRFGAQFQGNGRTCFGLWAPDAREVRVETADGRDWPLEGS DSGWFEATLPCPPGTRYRYRIDGRPGVPDPASQFQPDGVHGHSQVLDHGTYAWRVDEW RGRPWHEAVIYELHVGLFGSYAEVERFLPRLVELGVTAVELMPLGEFPGRRNWGYDGV LPFAPASAYGTPEQLKHLIDSAHGMGLMVFVDVIYNHFGPDGNYLAQYAAAFFRDDRQ TPWGQAIDFRRGEVREFFYENALMWLLDYRVDGLRFDAVHAIPDSAFLVEMARRLRGA AGPERHVHLVLENDDNRASLLRQGYDAQWNDDGHHALHVLLTGENDGYYQDYPEPLRC LARCLAEGFVYQGEANRHGRPRGEPSADLAPDAFVLFLQNHDQVGNRAFGERLSVLAE PQALRLAIALQLLAPMIPLLFMGEECAAREPFLYFTDHQGELADAVREGRRKEFGEFG RFGEGATLASLPDPNAVETFERSRPGLADCDPAWRGFYRQLLEIRHEHLIPRLRGARS LGVTTIAGAALSARWRLGDGSDWRIDFNPSPLEAEVEPPAAATWVLFLDNLACAEYRR GRLSPRSIAVSLEPAHE" misc_feature complement(2386715..2388292) /locus_tag="PA2164" /note="malto-oligosyltrehalose trehalohydrolase; Region: trehalose_TreZ; TIGR02402" /db_xref="CDD:274114" misc_feature complement(order(2387219..2387221,2387483..2387485, 2387582..2387584)) /locus_tag="PA2164" /note="catalytic site [active]" /db_xref="CDD:200464" misc_feature complement(order(2387207..2387209,2387216..2387221, 2387414..2387416,2387426..2387428,2387477..2387479, 2387483..2387485)) /locus_tag="PA2164" /note="active site" /db_xref="CDD:200464" gene complement(2388346..2389887) /locus_tag="PA2165" /db_xref="GeneID:881026" CDS complement(2388346..2389887) /locus_tag="PA2165" /EC_number="2.4.1.21" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycogen synthase" /protein_id="NP_250855.1" /db_xref="GeneID:881026" /translation="MGHSVAGVCLEEPAVLTAFPSLLHPQDPPQQRDRILFVTAELSD FVKVGGLGDFSAALPRVLKREHSVRVLLPGYRQVLERCRDLRIIGSLPGRAAIPPCEI GLVTLDDGLEVMLVLCPLLYEREGTPYMDDQGNDWPDNHLRFARLCLAAAEIAGGRGA QGWQPGLVHANDWPSALTPAYMAWNGVRTPSLFTIHNLAYQGLCDLQCSAELGLPDEA LSHESMEFHGRLSFLKAGIAHAHHITTVSETYAQEITTPEYGCGLHGILKYKVEKRQL SGIVNGIDDSWQPHCDPHLVACFSARQWAGKRANTRYVEERFGLEPGKGPLFAVVSRL VQQKGIDLTLEISDALLQAGGRLVSIGRGEPNLEKAMLELARRHPGQVGVHIGFDETE ARRIYAGSDFLLMPSRYEPCGLSQLYAQCFGSLPIARCTGGLADTIVDGVTGFLFREE TAQSYLDAVMRAINVYHCPSLLNAMRCKAMAAPMFWSDSVEPYNRLYRRLLRNTAPAL RGVRQ" misc_feature complement(2388379..2389788) /locus_tag="PA2165" /note="glycogen synthase GlgA; Region: glgA; PRK00654" /db_xref="CDD:234809" gene 2390255..2390620 /locus_tag="PA2166" /db_xref="GeneID:881051" CDS 2390255..2390620 /locus_tag="PA2166" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250856.1" /db_xref="GeneID:881051" /translation="MLDTDENVVEYLEEHFKDVRVSCEPRPDGALLVTLRNNQGKRLM SRAISGQEQSSPLLLNQVLERIRRDLIIDQGPLQTRDSDYFRKRIDLLTFRDSDNQHL THRKVLVAGGKLRTMSLAR" misc_feature 2390288..2390488 /locus_tag="PA2166" /note="Protein of unknown function (DUF3509); Region: DUF3509; pfam12021" /db_xref="CDD:432267" gene 2390949..2392046 /locus_tag="PA2167" /db_xref="GeneID:881151" CDS 2390949..2392046 /locus_tag="PA2167" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250857.1" /db_xref="GeneID:881151" /translation="MSADPRQRLVVAHSVDPAAAEHEVQGNLALARWLAEVQKLEFGG RYEPELHQRGPLYLVPTRTLVGRETAVRLGVNSDEDLLGGFVEHAFIAGKAIVHPLPR GGVAPEGWNPLFAEKVRDVVLNGVSVFSLADAHRAGARMLAEGPVRAKLAEACGGLGQ YVAHDLDELDAWLGGLEERQLAQGLVLEANLESIVTHSVGQLRVNGFLLSYHGHQHQT RNARGELVYAGSDLLVARGGYAELLALDLAREVRQAIEYARIFDTAAAIFFPGCFASR RNYDIAQGRDGNGRERFGVLEQSWRVGGASSAEIAALEAFRADPGLPAVRAASFEIHE DKRLPDNSRVIYRGPDEHGDFLLKYAMTGEA" misc_feature 2390976..2392028 /locus_tag="PA2167" /note="Protein of unknown function (DUF3182); Region: DUF3182; pfam11379" /db_xref="CDD:431855" gene 2392043..2392819 /locus_tag="PA2168" /db_xref="GeneID:881206" CDS 2392043..2392819 /locus_tag="PA2168" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250858.1" /db_xref="GeneID:881206" /translation="MTANSERIRIGVGDDRIEGTFLSPRAKVPGVLFVHGWGGSQQRD LKRAQGIAGLGCVCLTFDLRGHGAESGRQALVTREDNLQDLLAAYDRLVAHPAIDSEA IAVVGTSYGGYLAAILSQLRAVRWLALRVPAIYRDEDWLTPKLLLDREDLSEYRSSLI PAASNRALQACAGFRGDVLLVESEFDSYVPHSTIMSFRAAFQQTHSLTHRIIDHADHA LSSEAAQDAYTSILVDWITEMVVGERLSITPAYATIHPAF" misc_feature 2392088..2392756 /locus_tag="PA2168" /note="Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]; Region: DAP2; COG1506" /db_xref="CDD:441115" gene 2392945..2393397 /locus_tag="PA2169" /db_xref="GeneID:879772" CDS 2392945..2393397 /locus_tag="PA2169" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250859.1" /db_xref="GeneID:879772" /translation="MNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDLRDPQLKAAML EQSRDCAAAADELERIVLELGGKPKDSTSFAGDLHRRWVDLKSLVTGKDEEAVLNECE RGEDVAKHRYQAALEKSLPAEIHQVIERQYQGVLRHHDRVRALRDARA" misc_feature 2392969..2393382 /locus_tag="PA2169" /note="Ferritin-like superfamily of diiron-containing four-helix-bundle proteins; Region: Ferritin_like; cl00264" /db_xref="CDD:469698" gene 2393424..2393633 /locus_tag="PA2170" /db_xref="GeneID:881197" CDS 2393424..2393633 /locus_tag="PA2170" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250860.1" /db_xref="GeneID:881197" /translation="MSQSLAFLLIGLATLVGFYDLWAFVSVFRSDRSVNSKALWSLLI AVLPVLGVLIWAVAGPRAATARPRD" misc_feature 2393481..2393603 /locus_tag="PA2170" /note="Phospholipase_D-nuclease N-terminal; Region: PLDc_N; pfam13396" /db_xref="CDD:463867" gene 2393708..2394178 /locus_tag="PA2171" /db_xref="GeneID:881230" CDS 2393708..2394178 /locus_tag="PA2171" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250861.1" /db_xref="GeneID:881230" /translation="MNAIELLVHDHETVKKLLNELSETTERALKKRSELLGRLELELV LHTAIEEDIFYPAIRESGGKEELKMYYEAKEEHRTVDSLVLPDLKRTRPDTVQFAGRV KVLKELLEHHIEEEEGELFPRARQLLDAAALKQLGQAMQQHKKELKARLEKRAA" misc_feature 2393708..2394148 /locus_tag="PA2171" /note="Hemerythrin domain-containing protein [General function prediction only]; Region: COG5592" /db_xref="CDD:444331" gene 2394182..2395258 /locus_tag="PA2172" /db_xref="GeneID:881273" CDS 2394182..2395258 /locus_tag="PA2172" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250862.1" /db_xref="GeneID:881273" /translation="MREEDRALLEELLLARGPGGQEDEVRAICQRELEGCCDEVGSDA AGNLVARISPPHLPREQARRAAVRLLAHLDEIAMIVKRVEADGTLRVVALGGAQPVSF GVCPVQILAGEAVLDGVLSYGSMHATGESPQGSDVLSGAVHWRDVHVVTRRSAEELAN LGVRPGTRVVLNRLWRRPLYFQDCVAAHFLDDRAPLLAVLGVAREIARRRDELHGDLY LVLTTMEEESNAGALFAARRLPGDISIAVEVGPTVAEYGTRLCRDPIVNSGDSKGYYS RHVTDRLLRAAERCQYQPQAALLVDFASDASALLSHGEAAQVGCIGIPTENTHGFEIV LEEGIEACRRTLVEFLVQPPDDEA" misc_feature 2394230..2395231 /locus_tag="PA2172" /note="M42 Peptidase, endoglucanase-like subfamily; Region: M42_glucanase_like; cd05657" /db_xref="CDD:349907" misc_feature order(2394236..2394244,2394257..2394259,2394269..2394271, 2394302..2394307,2394317..2394319,2394416..2394424, 2394455..2394457,2394491..2394499,2394527..2394532, 2394536..2394538,2394623..2394625,2394629..2394637, 2394674..2394679,2394716..2394718,2394722..2394724, 2394731..2394733,2394737..2394739,2394872..2394874, 2394881..2394886,2394959..2394967,2394983..2394985, 2395031..2395033,2395073..2395075,2395109..2395111, 2395157..2395162,2395169..2395171,2395178..2395180) /locus_tag="PA2172" /note="putative oligomer interface [polypeptide binding]; other site" /db_xref="CDD:349907" misc_feature order(2394395..2394397,2394752..2394754,2394854..2394859, 2394869..2394871,2394923..2394934,2395076..2395078, 2395085..2395090,2395163..2395168) /locus_tag="PA2172" /note="putative active site [active]" /db_xref="CDD:349907" gene 2395285..2395635 /locus_tag="PA2173" /db_xref="GeneID:881327" CDS 2395285..2395635 /locus_tag="PA2173" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250863.1" /db_xref="GeneID:881327" /translation="MNEYLPTSTANGLPHNLQRGERLASIGAGLVLAGFGLARGGLPG ACKAVAGGLLVSRGLSGHCHVKGLLNEPREELQLLREEVQHLTRRLQRLQERQRDDSR QDAALDAELPPNLP" misc_feature 2395321..2395491 /locus_tag="PA2173" /note="Protein of unknown function (DUF2892); Region: DUF2892; pfam11127" /db_xref="CDD:463227" gene 2395691..2395912 /locus_tag="PA2173a" /db_xref="GeneID:17373361" CDS 2395691..2395912 /locus_tag="PA2173a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719753.1" /db_xref="GeneID:17373361" /translation="MASHLFLISYILDDQPMTCELHSEADTLSREEARRHLEALHRPH DAEAISDIQVSKVERTHEPGTTPGHYQQP" gene complement(2395944..2396252) /locus_tag="PA2174" /db_xref="GeneID:881424" CDS complement(2395944..2396252) /locus_tag="PA2174" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250864.1" /db_xref="GeneID:881424" /translation="MDLFLALRELGRPDQMNLSYLYLKKILEEELRDHDCQCQLNPDF TVTISCRVDGPHGALYIVPNSDFLKSSSFSDLSAFILNLREEIRRFGEFEAELQTGTG " gene complement(2396536..2396883) /locus_tag="PA2175" /db_xref="GeneID:880402" CDS complement(2396536..2396883) /locus_tag="PA2175" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250865.1" /db_xref="GeneID:880402" /translation="MSGPDTLSQAFGTLLLALAFSAFIVFVRGYRPGGVSGAWYDLVL AFVAVWLAFWPEAGVLARSPSLANALGLVLQVGATLLGCLLGYGVARGLRRAMRETRQ KRSASSPTSRRGS" gene complement(2396896..2397486) /locus_tag="PA2176" /db_xref="GeneID:880367" CDS complement(2396896..2397486) /locus_tag="PA2176" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250866.1" /db_xref="GeneID:880367" /translation="MRNLETATLKLGIFHPHDSLSQALIAAALQRQIEVSALQADLNS LQARPGLRCKPASLASSIEVSQAAAGLDLLFAPLSDYAAEALPPICAALIDGALRAEV PRLFLLGHWQWLVAPRDAGEEQLGAGLERSLTVSGLDWTLVEVPSLPAGLRIDDFSRA GDVAEVEAARVFACAEALLDEVRLGLHKRQCLRLAP" misc_feature complement(2396902..2397423) /locus_tag="PA2176" /note="Putative NADH-flavin reductase [General function prediction only]; Region: YwnB; COG2910" /db_xref="CDD:442154" gene 2397569..2399668 /locus_tag="PA2177" /db_xref="GeneID:880261" CDS 2397569..2399668 /locus_tag="PA2177" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sensor/response regulator hybrid protein" /protein_id="NP_250867.1" /db_xref="GeneID:880261" /translation="MEFAGRAGVFRKVGQVPGASQRAAGRRSSYYLAGCALQPGSSSR RVNTSMKTTRKPKVPLNQATRNRLLDEAVDDYAIHTLDSAGHIASWSAGAARLFGHDA SEILGRDYACFHTRKDRDAGVPQQALRQADAEGRFETEGWRVRSNGKRFWAQVVIDAI RDSQGQLLGFAQLIHDLSEGRAAKEALRRSQEQFRLLVQSVTDYAIYMLDHRGRITNW NLGAQRIKGYLPEEVIGRHFSCFYTPEDREAGEPARGLAAAEREGRFEKEGWRVRKDG SRFWANVVIDPIRDSDGRLIGFAKVTRDITHRIEAERELERARQELFQAQKMESLGHL TGGVAHDFNNLLTVIIGSLGLLKKRLPGDQRTADLLQNALEAAQRGANLTQRMLSFAR KQRLDPQPCAIPDLLRGMTDLLIHSLGPSVSIETRFPLDLDLGLTDANQLELSIINLA TNARDAMPNGGRIVFSASNQRVPADNPHRLAPGNYICLSISDTGSGMDEETLRRAVEP FYTTKGIGRGTGLGLSIVDGLAEQLGGRLTLESQPGVGTTANIWIPAVPRTPESARTG NGATPQPPSESERVRLSCRVLVVDDDPLVLNNTAAMLEDLGCSVLKADSGSLALEILT ATPELDILLTDQAMPRMNGSQLVERVMAQGRPLKMALATGFAEKIEGAAAQLPKLAKP FGQEELYLFLTGTLKAG" misc_feature 2397752..2398513 /locus_tag="PA2177" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature 2398238..2399632 /locus_tag="PA2177" /note="histidine kinase; Provisional; Region: PRK13557" /db_xref="CDD:237425" gene complement(2399672..2400280) /locus_tag="PA2178" /db_xref="GeneID:880228" CDS complement(2399672..2400280) /locus_tag="PA2178" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250868.1" /db_xref="GeneID:880228" /translation="MTREMARLLISPSNAWPRLRQDYDHHPFAFLVPLLLLPLLPAAC LFIGTTQVGWSLPGNDSVQHLSSGSALLLATMCYLGFVAGVVIMGLFVRWVLFRTPSR PSVPGSLTFTTAIAVPLMLAGIVALVPWRILLLLAAAAACAYSVRLLFTGLPLFMRMQ ERQTLFYAFCILGVGFLTLLTTAFIFIELWGQSLAGSGEYLR" misc_feature complement(2399741..2400262) /locus_tag="PA2178" /note="Yip1 domain; Region: Yip1; pfam04893" /db_xref="CDD:461468" gene complement(2400655..2401605) /locus_tag="PA2179" /db_xref="GeneID:880102" CDS complement(2400655..2401605) /locus_tag="PA2179" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250869.1" /db_xref="GeneID:880102" /translation="MPSLNDPRLDVLVSLGNWLRGQDYRFVTVTPATHERVNARPENR MARDLAGIFGWSRAFAGESLPADWLTLLAGADLIRREADGWRSQVRVSSLGEQLFVHS AFPTLAADAVFFGPDTYRFDRLIRSHLASSDPARIRRAADIGCGAGPGAIRIAMACPD AEVHGLDINPAALDLARVNAALAGVGNLTLARSDLLSQAPGRFDLIVANPPYLLDASE RAYRHGGGMLGAGLSLAIVDAALERLEAGGSLLLYTGVAMVEGGDPFLARIRERLASR EWDWDYQELDPDVFAEELDSPAYREAERIAVVGLRVTRSA" misc_feature complement(2400850..>2401194) /locus_tag="PA2179" /note="16S rRNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]; Region: RsmC; COG2813" /db_xref="CDD:442062" gene complement(2401589..2402965) /locus_tag="PA2180" /db_xref="GeneID:880081" CDS complement(2401589..2402965) /locus_tag="PA2180" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250870.1" /db_xref="GeneID:880081" /translation="MSLSSPLPASSASPSPRVRDLYHALLDEPREHLEAAGEFLDQQL SLAATHDDDLPEDPADWPAWLDAGARRTAEAHAEYLRARRRGEGPRYFQVPSQAMHFI RSVAPTKLVDGAWLYGLLPHHGEERLRPLLETFLEELGDGVPARNHVLLYRRLLASIG SEEVEGLSDLHYLQGTQQLALGHLAADYLPEVIGYNLGYEQPPLHLLITTQELRELGF DPYYFQLHVTIDNAASGHARKALRALYDNLPQLGGRAAFLERVRNGYRLNEVGLSTTQ VIDGFDLEEELLAMFERKRPYAAGMHSDRCRIGGRTVNQWLAVPGRFPAFLACLEEEG WIRRHADPRGSRFWNLIEGDRAAMFGVFTPYEQQLLYDWIAGDWQAPAPADRDPLAPL AEPATAGGDVDAEQVALRRELLRLSPEQGVARLLELMAPHRHHGPAGLLATRMFSQRW RAAHAQPE" misc_feature complement(2402171..2402671) /locus_tag="PA2180" /note="Iron-containing redox enzyme; Region: Haem_oxygenas_2; pfam14518" /db_xref="CDD:434009" gene 2403151..2404284 /locus_tag="PA2181" /db_xref="GeneID:877967" CDS 2403151..2404284 /locus_tag="PA2181" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="glutamate--cysteine ligase" /protein_id="NP_250871.1" /db_xref="GeneID:877967" /translation="MTHDLAASGLRFGIEEEFFLLDASDLDIVRSAPAGFVAACRDTL GEHFAEEMFECQVEVASPVFSTLAEAARFHGQARQRLAHLAMDFGLRSLCVGTHPFAD WRRARSNPAAHFARLFEDQGRVARRSLVCGLHVHVEIPPSHDRMAVLQRVLPWLPLLL ALSASSPFRGGRRSGLASYRRALCGEWPRMNIPPALPDEDAYRRHLALLRETGCIRED GQVWWMIRPSSHVPTLELRICDACPRLADALSLAGLFRALVGEALGADPRALPVARDA CLEENYWQALRYGCAGRYLVEGRCVGAGDWLEMAWRQCRPQARQGNEWAYQHACGLLE ETSAARQLRRYRRLREAGQERHPALRRLVEELLEENLQPALAG" misc_feature 2403163..2404167 /locus_tag="PA2181" /note="carboxylate-amine ligase; Provisional; Region: PRK13515" /db_xref="CDD:237406" gene complement(2404386..2404655) /locus_tag="PA2182" /db_xref="GeneID:878623" CDS complement(2404386..2404655) /locus_tag="PA2182" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250872.1" /db_xref="GeneID:878623" /translation="MTTPRMIANSFRNYLAGYDCLVSISDTHEVTLQFSSHVNPQENI TIPGVALDLLANDEAVRRMSEVLHDEFALLLAGARRTPRIGRACS" gene complement(2404949..2405233) /locus_tag="PA2183" /db_xref="GeneID:879404" CDS complement(2404949..2405233) /locus_tag="PA2183" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250873.1" /db_xref="GeneID:879404" /translation="MNPRVIGACCGRSDPQAPLLKTLTFAILHFSIAFGVAYTLTGSV LTGGLIALIEPSCNTVAFYFHERVWQRFGARPRRESGHGHGNLVPSERRD" misc_feature complement(2405009..2405179) /locus_tag="PA2183" /note="Uncharacterized membrane protein, DUF2061 family [Function unknown]; Region: COG3205" /db_xref="CDD:442438" gene complement(2405230..2405739) /locus_tag="PA2184" /db_xref="GeneID:883138" CDS complement(2405230..2405739) /locus_tag="PA2184" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250874.1" /db_xref="GeneID:883138" /translation="MTSKQENLLDWLRDAHAMEQQAEQMLKAQAARLEHYPQLKTRIE QHIEETHGQQRLLEECLKRLDSSPSTLKDIGAKLMAFGQAVAGMTVSDEVVKGAMSGY VFENMEIAAYTVLIAAAREVGDAETLAALERILPQEQAMADWLRDHLPELTQAFLARD SQPDTEAKR" misc_feature complement(2405269..2405727) /locus_tag="PA2184" /note="Domain of unknown function (DUF892); Region: DUF892; pfam05974" /db_xref="CDD:428701" misc_feature complement(order(2405326..2405328,2405425..2405427, 2405581..2405583,2405590..2405592,2405683..2405685)) /locus_tag="PA2184" /note="dinuclear metal binding motif [ion binding]; other site" /db_xref="CDD:153097" gene 2405993..2406877 /gene="katN" /locus_tag="PA2185" /db_xref="GeneID:880822" CDS 2405993..2406877 /gene="katN" /locus_tag="PA2185" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="non-heme catalase KatN" /protein_id="NP_250875.1" /db_xref="GeneID:880822" /translation="MFVHDKRLQYTVRVAAPDPGLANLLLEQFGGPQGELAAAMRYFT QGLGECDPGRKDLLMDIATEELSHLEIIGSIVGMLNKGAKGRLAEAVEEEAELYRSLT GGGNDSHITSLLYGGGPALVNSGGVPWSAAYIDTIGEPTADLRSNIAAEARAKIVYER LINLTDDPGIKDALTFLMTRELAHQLSFEKALHSIQPNFPQGKLQGMPEFARRYLNMS RGEGDTRGSWNEGDGWEYVEAPQPALDGGDGTASVNLSETEQEVLQRMADRTRSDPMT DPLTGADLGAGAAADKAP" misc_feature 2405993..2406874 /gene="katN" /locus_tag="PA2185" /note="Manganese containing catalase; Region: Mn_catalase; pfam05067" /db_xref="CDD:252986" misc_feature order(2406095..2406097,2406185..2406187,2406194..2406196, 2406443..2406445,2406542..2406544) /gene="katN" /locus_tag="PA2185" /note="dimanganese center [ion binding]; other site" /db_xref="CDD:153110" gene 2407236..2407661 /locus_tag="PA2187" /db_xref="GeneID:878284" CDS 2407236..2407661 /locus_tag="PA2187" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250877.1" /db_xref="GeneID:878284" /translation="MSFSRFAQRLSNWAGRPPTFVVALGLILLWAISGPLFDFNDTWQ LVINTSTTIVTFLMVFLIQNTQNRDTDALHIKIDELLRSTRRAHNALLGLDDLDADTL RELRQRYQHMGEQDGETPESVAAEEERQCGCGEERRRAD" misc_feature 2407242..2407619 /locus_tag="PA2187" /note="Low affinity Fe/Cu permease [Inorganic ion transport and metabolism]; Region: Fet4; COG5478" /db_xref="CDD:444229" gene complement(2407681..2408847) /locus_tag="PA2188" /db_xref="GeneID:879617" CDS complement(2407681..2408847) /locus_tag="PA2188" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase" /protein_id="NP_250878.1" /db_xref="GeneID:879617" /translation="MRALTFHGSHDVRIDRVAEPRLQEPDDLLLRVTATAICGSDLHL YRGKIPMVEQGDILGHEFMGVVEEVGSAVTAVRPGDRVVVPFVIACGECFFCRLNLHA ACETTNPGRGAILNKKQIPPGAALYGYSHLYGGVPGGQAEYVRVPKANSGPFVIPDVM EDERVLFLSDILSTGYQAVRNAGVRQGSSVAIYGAGPVGLMAAACARMLGAERIFIVD HHPYRLDFAARTYGAIPIDFDQEDDPAAAIIERTDGHRGVDAVIDAVGFEAKGSVTET VLTALKLEASSGKALRQCIAAVRRGGTVSVPGVYAGFIHGFLFGDAFDKGLTFKMGQT HVQALLPALLEHIGNGDLHPEAIISHRLRLDDAPEGYALFDEKREDCRKVVLRP" misc_feature complement(2407684..2408847) /locus_tag="PA2188" /note="Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1; Region: FDH_like_1; cd08283" /db_xref="CDD:176243" misc_feature complement(order(2407726..2407728,2407846..2407854, 2407921..2407929,2407978..2407980,2408050..2408058, 2408134..2408136,2408179..2408181,2408191..2408199, 2408254..2408262,2408266..2408271,2408326..2408328, 2408338..2408340,2408590..2408592,2408719..2408721, 2408728..2408736)) /locus_tag="PA2188" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:176243" misc_feature complement(order(2408338..2408340,2408668..2408670, 2408728..2408730,2408734..2408736)) /locus_tag="PA2188" /note="catalytic Zn binding site [ion binding]; other site" /db_xref="CDD:176243" misc_feature complement(order(2408536..2408538,2408560..2408562, 2408569..2408571,2408575..2408580)) /locus_tag="PA2188" /note="structural Zn binding site [ion binding]; other site" /db_xref="CDD:176243" gene 2409107..2409661 /locus_tag="PA2189" /db_xref="GeneID:881875" CDS 2409107..2409661 /locus_tag="PA2189" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250879.1" /db_xref="GeneID:881875" /translation="MSKQHIIHFTGPINSSTCGNLINTCAKVLQQEAEELRINIATMG GECSYGFTLYNFLRALPVPIHTHNLGTVESMGNILFLAGERRSASAHSKFLFHPFHWT LHGAVDHARMAEYAMSLDYDLELYARIVAENTRDAPERLDIPRYLMAYPRILGPEDAL ACGLIHTVDDSPIPAAACQWSIHS" misc_feature 2409113..2409619 /locus_tag="PA2189" /note="ATP-dependent protease ClpP, protease subunit [Posttranslational modification, protein turnover, chaperones]; Region: ClpP; COG0740" /db_xref="CDD:440503" gene 2409837..2410181 /locus_tag="PA2190" /db_xref="GeneID:882079" CDS 2409837..2410181 /locus_tag="PA2190" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250880.1" /db_xref="GeneID:882079" /translation="MTDKRQGMSTSEAGQKGGAATSRSHGKEFYQEIGHKGGQASGGN FANDPQRAAEAGRKGGQQSGGNFANDPERAAEAGRKGGQQSGGNFANDREKASEAGRK GGQHSHGGGRSS" misc_feature 2409861..2410034 /locus_tag="PA2190" /note="General stress protein YciG, contains tandem KGG domains [General function prediction only]; Region: GsiB; COG3729" /db_xref="CDD:442943" misc_feature 2409990..2410178 /locus_tag="PA2190" /note="General stress protein YciG, contains tandem KGG domains [General function prediction only]; Region: GsiB; COG3729" /db_xref="CDD:442943" gene complement(2410344..2411480) /gene="exoY" /locus_tag="PA2191" /db_xref="GeneID:879421" CDS complement(2410344..2411480) /gene="exoY" /locus_tag="PA2191" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="adenylate cyclase" /protein_id="NP_250881.1" /db_xref="GeneID:879421" /translation="MRIDGHRQVVSNATAQPGPLLRPADMQARALQDLFDAQGVGVPV EHALRMQAVARQTNTVFGIRPVERIVTTLIEEGFPTKGFSVKGKSSNWGPQAGFICVD QHLSKREDRDTAEIRKLNLAVAKGMDGGAYTQTDLRISRQRLAELVRNFGLVADGVGP VRLLTAQGPSGKRYEFEARQEPDGLYRISRLGRSEAVQVLASPACGLAMTADYDLFLV APSIEAHGSGGLDARRNTAVRYTPLGAKDPLSEDGFYGREDMARGNITPRTRQLVDAL NDCLGRGEHREMFHHSDDAGNPGSHMGDNFPATFYLPRAMEHRVGEESVRFDEVCVVA DRKSFSLLVECIKGNGYHFTAHPDWNVPLRPSFQEALDFFQRKV" misc_feature complement(2410875..2411372) /gene="exoY" /locus_tag="PA2191" /note="Anthrax toxin LF subunit; Region: Anthrax_toxA; pfam03497" /db_xref="CDD:397528" gene 2411709..2412122 /locus_tag="PA2192" /db_xref="GeneID:878651" CDS 2411709..2412122 /locus_tag="PA2192" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250882.1" /db_xref="GeneID:878651" /translation="MKVREIMSREVRTVTPQTTLGEAALLMRQADIGALLVNEGERLT GVVTDRDLAVRGLADGLGADRPVREVMSGELRYCFEDEEVDHVTKNMAQLEKRRLPVM DRNKRLVGIVSLANIATCNTDKLSANLLRGVARAH" misc_feature 2411727..2412068 /locus_tag="PA2192" /note="CBS pair domain found in Hypoxic Response Protein 1 (HRP1) -like proteinds; Region: CBS_pair_HRP1_like; cd04622" /db_xref="CDD:341390" misc_feature order(2411730..2411732,2411736..2411744,2411808..2411816, 2412000..2412002,2412039..2412041,2412045..2412047, 2412051..2412056,2412063..2412065) /locus_tag="PA2192" /note="putative ligand binding site II [chemical binding]; other site" /db_xref="CDD:341390" misc_feature 2411730..2411921 /locus_tag="PA2192" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341390" misc_feature order(2411808..2411810,2411844..2411846,2411856..2411861, 2411868..2411870,2411934..2411936,2412000..2412008, 2412051..2412053) /locus_tag="PA2192" /note="putative ligand binding site I [chemical binding]; other site" /db_xref="CDD:341390" misc_feature 2411934..2412065 /locus_tag="PA2192" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341390" protein_bind 2412136..2412144 /experiment="Ad-hoc quantitative phenotype observation [PMID: 15466037]" /experiment="EMSA [PMID: 15466037]" /experiment="S1 nuclease protection [PMID: 15466037]" /note="'Transcription factor binding site for NP_253948.; Evidence of regulation for: PA2193, PA2194'" /bound_moiety="AlgR" protein_bind 2412460..2412474 /experiment="DNA-array expression analysis [PMID: 18045385]" /experiment="EMSA [PMID: 18045385]" /note="Transcription factor binding site for NP_250122.; Evidence of regulation for: PA2193" /bound_moiety="RsaL" gene 2412546..2412860 /gene="hcnA" /locus_tag="PA2193" /db_xref="GeneID:882197" CDS 2412546..2412860 /gene="hcnA" /locus_tag="PA2193" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="hydrogen cyanide synthase subunit HcnA" /protein_id="NP_250883.1" /db_xref="GeneID:882197" /translation="MHLLERQHDIQPLSRADMTIHLNGQPVAAAAGETVLNVLNAVGL RRLARNDHGQASGAFCGMGVCHCCLVAIDGRPKRRACQTVVRPGMRVETESNRFDQEE RP" misc_feature 2412600..2412830 /gene="hcnA" /locus_tag="PA2193" /note="2Fe-2S iron-sulfur cluster binding domain; Region: Fer2_4; pfam13510" /db_xref="CDD:433268" misc_feature order(2412681..2412686,2412723..2412725,2412732..2412734, 2412738..2412749,2412783..2412788) /gene="hcnA" /locus_tag="PA2193" /note="catalytic loop [active]" /db_xref="CDD:238126" misc_feature order(2412723..2412725,2412738..2412740,2412747..2412749, 2412786..2412788) /gene="hcnA" /locus_tag="PA2193" /note="iron binding site [ion binding]; other site" /db_xref="CDD:238126" gene 2412857..2414251 /gene="hcnB" /locus_tag="PA2194" /db_xref="GeneID:882182" CDS 2412857..2414251 /gene="hcnB" /locus_tag="PA2194" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="hydrogen cyanide synthase subunit HcnB" /protein_id="NP_250884.1" /db_xref="GeneID:882182" /translation="MNLRPVIVGGGSAGMAAAIELARRGVPCVLFDEASRPGGVVYRG PLRAGVDPAYLGARYTRMLEKLRRDFSACAGHIDLRLNSRVVGGDGQRLMVLDEAERL HEVEYSHLLLATGCHERSVPFPGWTLPGVMLLGGLQLQIKSGVVKPLGDTLIAGSGPL LPLVACQLHAAGVRVAGVYEACAFGRMARESLALLNKPQLFLDGLSMLGYLKLNGIPL HYGWGVVEASGDGELTEVTVAPYDEEWRPDLENARPVKASTLAVGYGFIPRTQLSQQL GLEHGFSDDGYLRAECNVWQQSSQPHIHLAGDMAGIRGGEAAMIGGRIAALSILLQRE AIAPAEAIERRESHLARLEAIKRFRAGVERYTQRGARQVELARADTVICRCEQVTRGD IERALEQGVQDIAGLKMRTRAGMGDCQGRMCIGYCSDRLRRATGRHDVGWLRPRFPID PIPFSAFQNLGTEA" misc_feature 2412941..2413846 /gene="hcnB" /locus_tag="PA2194" /note="NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism]; Region: FadH2; COG0446" /db_xref="CDD:440215" misc_feature 2413994..2414155 /gene="hcnB" /locus_tag="PA2194" /note="bacterioferritin-associated ferredoxin (BFD)-like [2Fe-2S]-binding domain of anaerobic glycerol 3-phosphate dehydrogenase subunit A, hydrogen cyanide synthase subunit B, and similar proteins; Region: GlpA-like_Fer2_BFD-like; cd19946" /db_xref="CDD:381079" gene 2414254..2415507 /gene="hcnC" /locus_tag="PA2195" /db_xref="GeneID:882196" CDS 2414254..2415507 /gene="hcnC" /locus_tag="PA2195" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="hydrogen cyanide synthase subunit HcnC" /protein_id="NP_250885.1" /db_xref="GeneID:882196" /translation="MNRTYDIVIAGGGVIGASCAYQLSRRGNLRIAVVDDKRPGNATR ASAGGLWAIGESVGLGCGVIFFRMMSSRNRREAQGAAVAVDASTPHILPPAFFDLALQ SNALYPELHRELIERHGMDFKFERTGLKYVIQDDEDRQYAEHIVAQIPHLAEQVRWLD REELRRAEPAVSHAAHGALEFLCDHQVSPFRLADAYLEAARQNGVELLPGTNVTGVLR QGRRISGVRTDNAGVLHCRTLINAAGAWAAELSEMATGRRIPVKPVKGQIVLTERMPR LLNGCLTTSDCYMAQKDNGEILIGSTTEDKGFDVSNTFPEIAGLVQGAVRCVPELQQV NLKRTWAGLRPGSPDELPILGPVAEVEGYLNACGHFRTGILTSAITGVLLDRLVHEET LPLDIAPFLAARFQPEPAAVAVAAC" misc_feature 2414260..2415465 /gene="hcnC" /locus_tag="PA2195" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" gene 2415661..2416245 /locus_tag="PA2196" /db_xref="GeneID:881967" CDS 2415661..2416245 /locus_tag="PA2196" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250886.1" /db_xref="GeneID:881967" /translation="MKTSYDDTRQHLLDTGYRIMAVKGFSGVGLNEILQSAGVPKGSF YHYFKSKEQFGQALLEDYFRVYLADMDQRFSAPGLNARERLMSYWQKWLDNACPPCDE QRCLVVKLSAEVADLSESMRITLRDGSDGIIERLVGCLGQGRDDGSLAPCDARHMASA LYQLWLGASLLSKLHRSPGPLETAMQTTRSLLEI" misc_feature 2415676..2416161 /locus_tag="PA2196" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene 2416376..2417413 /locus_tag="PA2197" /db_xref="GeneID:879292" CDS 2416376..2417413 /locus_tag="PA2197" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250887.1" /db_xref="GeneID:879292" /translation="MSQSTQVNRRIVLASRPHGAPTRDNFRIEQVPLPEPGAGQVLLR TVYLSLDPYMRGRMSDAPSYAPPVELGAVMVGGTVSRVEASNHPGFKVGDWVLSANGW QDYALSDGSGLARLGESPEHPSYALGLLGMPGFTAYMGLLDIGKPQAGETLVVAAATG PVGATVGQIGKLKGCRVVGVAGGAEKCRHAVQVLGFDACLDHHAADFAERLAEACPDG IDIYYENVGGKVFDAVFPLLNAKARIPVCGIVAHYNDTELPPGPDRLPALMGTILRKR IKVQGFIIFDDYGHRYDEFQRDMSKWFADGLIQYREERVDGLENAPEAFFGLLQGRNF GKLVVRVGADA" misc_feature 2416385..2417398 /locus_tag="PA2197" /note="NADPH-dependent curcumin reductase CurA [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]; Region: CurA; COG2130" /db_xref="CDD:441733" gene 2417410..2417754 /locus_tag="PA2198" /db_xref="GeneID:883105" CDS 2417410..2417754 /locus_tag="PA2198" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250888.1" /db_xref="GeneID:883105" /translation="MNQAVRVVALLQAREGRAAEVERLLLACVQPSRAEDGCLSYVLH RSLDEAGRFVFVERWADRDAIERHRRMPHYRAMADAVADLLADRQVFLLEELPAASLS PVDPEPTRPHEE" misc_feature 2417422..2417670 /locus_tag="PA2198" /note="Quinol monooxygenase YgiN [Energy production and conversion]; Region: YgiN; COG1359" /db_xref="CDD:440970" gene 2417760..2418635 /locus_tag="PA2199" /db_xref="GeneID:881677" CDS 2417760..2418635 /locus_tag="PA2199" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="dehydrogenase" /protein_id="NP_250889.1" /db_xref="GeneID:881677" /translation="MKVGFLGLGGMGAAMATRLVQAGLEVTVWNRSAAACEPLVALGA ARAEEVGELFGLDVVISMLADDQAIRGVLLDSGALERARPGLIHLSMSTLSLDCVEAL DQAHQRQGLAFVAAPVFGRTDVAEAGKLNIVVGGPEEAIEQVKALLEIMGQKTWFFGK DPRGAMAVKISGNFMIASAIESMGESVALVKRLGVEPGRFMELMSSTLFDAPVYRNYG PQIVEQRFTPARFRLVLGLKDVDLALSAGKRHNVPLPLASLLHDVLLEAIAHGDGESD WTALAKVALSRSGQI" misc_feature 2417760..2418608 /locus_tag="PA2199" /note="3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase [Lipid transport and metabolism]; Region: MmsB; COG2084" /db_xref="CDD:441687" gene 2418723..2420318 /locus_tag="PA2200" /db_xref="GeneID:881519" CDS 2418723..2420318 /locus_tag="PA2200" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250890.1" /db_xref="GeneID:881519" /translation="MSERGTAAEGRINWRRILPILLTTTLVGGVCGIFVINELDRQHD GAHLRSYTERALERALEISSAADQMLREMNAGSAPACSDRDLEMLRSIVLESRFMSDV GRISGDRVMCTGVRGRLRAPWGLSAPDRVDAAGTRFWSEGMPLPLQALPTGLVSRGNA VVFIAPHAYFDVDHPAPGISAAAVSSGGDYIYHRFAWDDDQPLEALGRPGWPRFIGAR QISLCDPTQDICVVSLLRERGLLGTEPGRAAMAAAIGGGLLFGVMLLLSYLFGFLNDE KLPARLLRALKREALEVHYQPIVRLASGRCAGVEALARWTDSSLGRVSPDVFIGALEE SGDIELLTRFVFRRALKQLGPLLREQRSFYVSVNVTGKDIADPGFIDFAMRQMARESV RPEQVALELTERTTEAQGCLLAGMNRLRELGLKIYVDDFGTGHSNLVYLANLPVDAIK IDKVFTQSIGDSSAVELIFDKLCSMAEHLEIGVVVEGIETQAQADHVLRRSPEALGQG WHFGKALPLEAFLDYYRNQPAGR" misc_feature 2418753..2420309 /locus_tag="PA2200" /note="Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains [Signal transduction mechanisms]; Region: YjcC; COG4943" /db_xref="CDD:443970" gene 2420443..2421327 /locus_tag="PA2201" /db_xref="GeneID:880772" CDS 2420443..2421327 /locus_tag="PA2201" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250891.1" /db_xref="GeneID:880772" /translation="MHAFPLTLDNRLAEALPLWRNLARTDRAPRRNIDLADWKADWRE LIAALDRFSRSHGYRQPFAAQGHAALENAWAWGQAAENASTLLLKAIDRGLAGAELRS IYLETAALWLDYSRLLGAARDSLREQGEVDFETAPALAPRTGQYPFALQLLAMGVLLD AQELIPALVEEVLQFDTDRLLDYLGAAALGLTSASEETFHPRPFGQLRAFFEEADGSD AQALAPYLQSQYREFFQLSPKAQKKTRRLTGPYAWGWWAMEVSALGVLYGWDDGVLRA SPHYLGDLVDYARARGDA" misc_feature 2420971..2421294 /locus_tag="PA2201" /note="Domain of unknown function (DUF1911); Region: DUF1911; pfam08929" /db_xref="CDD:462638" gene complement(2421343..2422020) /locus_tag="PA2202" /db_xref="GeneID:879202" CDS complement(2421343..2422020) /locus_tag="PA2202" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_250892.1" /db_xref="GeneID:879202" /translation="MDFSVISDNLSYLLLGAYPDGPLGGAALTLLLASLSGLASAVLG LVLGVALAVLPGKPRLLLVALLGFFRAIPVLMLIFWTYFLLPIVFHVDVPALATVVCA LSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQVLRLVILPQALPVMLPSFLNQ WVSLIKDTSLAYVIGVGELSFVATQVSNRVMVHPTEIFLFVALLYFLLCTSLDLAAAF LARRRRA" misc_feature complement(2421385..2422020) /locus_tag="PA2202" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" gene complement(2422022..2422738) /locus_tag="PA2203" /db_xref="GeneID:877942" CDS complement(2422022..2422738) /locus_tag="PA2203" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_250893.1" /db_xref="GeneID:877942" /translation="MFGELLAPQYLRWLLDGFLLTLGLALLSCLLATLIGAPLAIARL SRRRLLSWPARAYLALFRNTPLLVQLFFWYFGVPALLPEALVSWLNTPHETPLLDWPS FEFLAGAWGLTLYTSAFVAEEFRAGIASVRPEQRAAGLALGLTQRQVWRVVVLPQALR TALPPLLGQYMNALKNSSLAMAIGLAELSYASRQVETETFKTFQAFGIATLLYIGAIA LIEAFGQALQQTRRYRQGGA" misc_feature complement(2422031..2422723) /locus_tag="PA2203" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" gene complement(2422819..2423625) /locus_tag="PA2204" /db_xref="GeneID:877884" CDS complement(2422819..2423625) /locus_tag="PA2204" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_250894.1" /db_xref="GeneID:877884" /translation="MKKLPAITALALALISGLAQADRLEDIRKAGVLRVASFDSNPPF GFVDAKSKQIEGLDVDYAKALADKLGVRLQVLPTNPANRIPLLTANKVDLVLANFTIT PERAQQVDFSIPYFSSGQQFIVKKGTLTSPEVLNKWRVGVDKGTVNEGVLREKFPGAK VIAYDDTPFAFTALRNGQVQAITQDGPKLIGLLANVPDRDKYEVPPFTISNDLIGVGI PKGEKALTEFVDKSLRELEQDGQAQKIYDTWFGPQTKTPLARLYKIGDKS" misc_feature complement(2422873..2423556) /locus_tag="PA2204" /note="Substrate binding domain of ABC glutamine transporter from Bacillus subtilis; the type 2 periplasmic-bindig protein fold; Region: PBP2_BsGlnH; cd13689" /db_xref="CDD:270407" misc_feature complement(order(2422984..2422986,2423071..2423076, 2423185..2423190,2423311..2423313,2423332..2423334, 2423377..2423379,2423503..2423505,2423512..2423514)) /locus_tag="PA2204" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:270407" misc_feature complement(order(2423119..2423121,2423128..2423130, 2423470..2423472,2423485..2423487)) /locus_tag="PA2204" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:270407" gene complement(2423924..2424400) /locus_tag="PA2205" /db_xref="GeneID:879526" CDS complement(2423924..2424400) /locus_tag="PA2205" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250895.1" /db_xref="GeneID:879526" /translation="MPSIKPFGLALLVLGLSACASLGQSGNRDNEVKVAAQKLIGQPA GKAFELFGKPDQGLGPSSYGSGGFYAWNRVRTHMGPDKVFIQTGTEYVGQRETWVGVG GQGVAGMAPVSSEAVYRKTGYYENETILDYFCSITLYTDSRDIITNASVIDCRDSR" gene complement(2424482..2425429) /locus_tag="PA2206" /db_xref="GeneID:880713" CDS complement(2424482..2425429) /locus_tag="PA2206" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250896.1" /db_xref="GeneID:880713" /translation="MSRIPDASIIHSRLRLRQLRLMLALEELGSLRRAADEIGMTQPA ATKMLHEAEDLLGVELFERLPRGMRATPFGETLIYYSRMIFAELSGMREELVALESGN LGRVTVGAIPALASSLLTRTIATLKQSHPRLSMSIQVDTSDVLVQALQQDQLDVVLGR IPSGARTDDLVFDSLGEEELCVVVGAQNPLSQARKLDWGELQELTWVLQQHPSPMRGI VNQAFHNARIDLPSSIVETTSIMTLLSLLQQTDMIGITPRSVIEDYPGKHLLAILPIQ LEPRLPPYGLITRRNRVHSSAMQTFMASVHAEQARHLAK" misc_feature complement(2425205..2425351) /locus_tag="PA2206" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(2424521..2425117) /locus_tag="PA2206" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" misc_feature complement(order(2424683..2424688,2424692..2424697, 2424713..2424730,2425013..2425033,2425037..2425039, 2425049..2425051,2425058..2425063,2425067..2425072)) /locus_tag="PA2206" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene complement(2425497..2427017) /locus_tag="PA2207" /db_xref="GeneID:877781" CDS complement(2425497..2427017) /locus_tag="PA2207" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250897.1" /db_xref="GeneID:877781" /translation="MSEFDSLMQGMSLVLSAHHLGLMVIGVLLGILVGVLPGLGAPNG VALLLPLTFSMSPVSAIILLSCMYWGALFGGSITSILFNIPGEPSSVATTFDGYPMAR NGQAGEALTAAFTSALLGALVGVLLLTFLSTHIARFALAFSSPEFFAVYLLAFCTFIG MSRNPPLKTLVAMTIGFAMAAVGMDTVSGDLRLTFDQPWLLSGLSFELAVIGLFGIGE ILCTVEEGLVFRGERARITPMVILRTWARLPRYWLTWLRSALVGCWMGVTPGGPTAAS FMSYSLARRFSKNRENFGNGEVEGVIAPETADHSAGTSALLPMLTLGIPGSATAAVML GGLMIWGLHPGPTLFVEQHDFVWGLIASMYLGNVVSLIVVLATVPLFASILRIPFAIV APIIVMVCAIGAYSVHNAMLDVVLMLLFGALGYLFKKLGYPIAPLVLAAVLGDKAEDA FRQSMLFSDGQLSVFWSNPLVAGLTGAALAMLLWPLLARCAGALFRRGRRSLRHAA" misc_feature complement(2425551..2427017) /locus_tag="PA2207" /note="TctA family transporter [General function prediction only]; Region: COG3333" /db_xref="CDD:442562" protein_bind 2426551..2426563 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(2427014..2427544) /locus_tag="PA2208" /db_xref="GeneID:879197" CDS complement(2427014..2427544) /locus_tag="PA2208" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250898.1" /db_xref="GeneID:879197" /translation="MSSSSDAPLVATRWVEIGLALFTAALGAIVMYGSQDIGIGWGDS GPEAGYFPFYIGLLLSAASLGNLLLALCRWRALGTSFVARTAFRRVLAVFLPIAAYVA AMPFAGIYLASALFIAWFMWRDRSRDKPYGVPLIVTLSCGAALASYLVFAVWFKVPLD AGILVDLAAFVGSARP" misc_feature complement(2427068..2427481) /locus_tag="PA2208" /note="Tripartite tricarboxylate transporter TctB family; Region: TctB; pfam07331" /db_xref="CDD:462147" gene complement(2427572..2428669) /locus_tag="PA2209" /db_xref="GeneID:879682" CDS complement(2427572..2428669) /locus_tag="PA2209" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250899.1" /db_xref="GeneID:879682" /translation="MPYFEWTLIGALRTLRSTHNNNDNQRSSMRTAYARSVPSFLAAC ALLCCTALPALAAAWKPEENLEIVVAGGPGGGTDQLARLVQSAISQNKLLDVNTVVLN KGGGNGAEAFLDLKLAKGNAHKLVIGTNNVYLLPLVARLGYQWTDLTPVAAVAEDDFI LWTYQAAPWADAAAFLADLKKDATGMRFGGSQSKDVDQTLSLLLGKQVGGKLTYIPFK SGSEASIQLAGRHIAANLNNPAESLSQWRGGQVRPLCVFSHERMIYTAKVAAEQSWAD IPTCHEQGLGIDQYRFPRTVFLPGGVSDEQRAFYVELMRKVSQTAEFRDYVERSALAP TFLAGEDLVSYIEKDRQRVIPLFQEAGWLRQ" misc_feature complement(2427584..2428549) /locus_tag="PA2209" /note="Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC [Energy production and conversion]; Region: TctC; COG3181" /db_xref="CDD:442414" gene 2428852..2430177 /locus_tag="PA2210" /db_xref="GeneID:881935" CDS 2428852..2430177 /locus_tag="PA2210" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_250900.1" /db_xref="GeneID:881935" /translation="MAQAQTAVLQADPAQDKATAAKPSNVRWRIFAIVFALTVINLVD RVSLSIAMPTIAGEFQLTPSMQGLILSSFFWAYALLQIPGGWLIDRYGPRRVIGWSTG LWGAFQTLAAFASGGLSLMFARVALGAAEAPLFPSGGKLNSLWLGSSERSRGAVLMDC GGPLGVALGGLVIAYLIAVLGSWRSAFFIAGIATLAMAWLAWHYLRDDPAEHPGVNAA ELDRINADRTTPLAEADCQAGGRLGIAGRSLVGIVLGRASWAMVFFGLLTWGPSYLAQ ARGFDIKGIGAATFVIFLCGAVGSLVGGFLCDLLIRKGVRRGLAAKGLLTVSGLAALV AFLLLPSLEDAYAAVTLLALTAFFLMWGSLYWSFPALLATPARVGLVGGVMNMAGSLG GIAVPILVGLLLQHLGGYAAVLGFFALCSAAFIAGTLLISLDKTEAKHG" misc_feature 2428930..2430144 /locus_tag="PA2210" /note="Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; Region: MFS_ExuT_GudP_like; cd17319" /db_xref="CDD:340877" misc_feature order(2428972..2428977,2428984..2428989,2428996..2428998, 2429092..2429094,2429242..2429247,2429251..2429259, 2429266..2429268,2429326..2429328,2429335..2429340, 2429347..2429349,2429617..2429619,2429626..2429631, 2429638..2429646,2429653..2429655,2429737..2429739, 2429749..2429751,2429923..2429928,2429935..2429937, 2429947..2429949,2429995..2429997,2430004..2430009, 2430016..2430021,2430028..2430030) /locus_tag="PA2210" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340877" gene 2430170..2431129 /locus_tag="PA2211" /db_xref="GeneID:880752" CDS 2430170..2431129 /locus_tag="PA2211" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250901.1" /db_xref="GeneID:880752" /translation="MAELYDGPIVDAHHHFWDPQANYHPWLAEDAKIPFRYGDYSAIK RRYLPADYFGDVGAHRVVETVYVETEWDPRDPLGETRFVHHLAERHGAPHAVVAQAWL DAPDAAEVLAAQAGFARVRSVRHKPGGPQRPQQVGELRSLMSDERWRRGYAELARHGL HFDLQTPWWNLAEAACLARDFPDTLIVLNHAGLPSDRSEEGLAAWQRAMARFAECPNV ALKISGIGQAGRRWSVEDNAWIVRESIALFGVERAMFASNFPVDSLCGSFDDIYGGFK RIVADLPYADQERLFHSNARRIYRTVPDTVRLQQASPDPRTSP" misc_feature 2430191..2431069 /locus_tag="PA2211" /note="Predicted metal-dependent hydrolase, TIM-barrel fold [General function prediction only]; Region: COG3618" /db_xref="CDD:442836" gene 2431126..2432139 /locus_tag="PA2212" /db_xref="GeneID:881915" CDS 2431126..2432139 /locus_tag="PA2212" /EC_number="1.1.1.262" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="4-hydroxythreonine-4-phosphate dehydrogenase" /protein_id="NP_250902.1" /db_xref="GeneID:881915" /translation="MNAPSLPRLAMVLGDPAGIGPELIARLLADTEVREKAHIVLIAD EAEMRRGMRIAGCEFPYRRIDALETLDFADATPLLHPWLSQGGDEFPRSEASAVGGRY SLETLALALELTRSGRTDAILFGPLNKTSLHMAGMDHSDELHWFAERLGFGGPFCEFN VLDDLWTSRVTSHVALAEVPGLLSQERVGEAIRLIDDALRRSGLARPRIGVCGLNPHN GDNGSFGREELDIIAPAVQKAREQGIAADGPYPADTIFLKVQGDARAFDAVVTMYHDQ GQIAIKLMGFSRGVTVQGGLPIPIATPAHGTAFDIAGQGRADVGATRQAFEIACRMGR HKA" misc_feature 2431132..2432136 /locus_tag="PA2212" /note="4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed; Region: pdxA; PRK00232" /db_xref="CDD:234696" gene 2432312..2433562 /locus_tag="PA2213" /db_xref="GeneID:881954" CDS 2432312..2433562 /locus_tag="PA2213" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="porin" /protein_id="NP_250903.1" /db_xref="GeneID:881954" /translation="MTRSAPNLLKSASLAPVLLAGLPSLAGAEGFIEDASVSLGLRNL YFNRDFRQPGAAQSKQEEWAQGFLLQAKSGYTQGTLGLGVELIGQLGLKLDSSPDRAG SGLLPRHADGRAADDYARLGVAPKLKLSNTELKLGELLPELPILLRNDGRLLPQTFQG GMLTSREIAGLTLHGGQMRSLSQRNSSDHQDLSVDGRGGAFSDRFDYLGAEYRFNAER SQVGLWQARLQDIYRQDYYSLSHKQSFGGWRLGASVGLFDTRDEGAAKLGELENRALT GFFSATRGGHSLGAGYQRMYGDDGMLYIAGTSTPLVNDIQVRNFTSAGERSWQLRYDY DFVALGIPGLTAMARYASGAHARTKAMDDGRAWERDVDVAYVIQSGPLKNLGLRWRNA MLRSNHAADVDENRLILSYSLPLL" misc_feature 2432396..2433553 /locus_tag="PA2213" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" protein_bind 2433623..2433635 /experiment="Beta-gal reporter assay [PMID: 23382903]" /experiment="DNA-array expression analysis [PMID: 23382903]" /experiment="EMSA [PMID: 23382903]" /experiment="qRT-PCR [RNA] [PMID: 23382903]" /note="'Transcription factor binding site for NP_250896.; Evidence of regulation for: PA2214, PA2215'" /bound_moiety="PA2206" gene 2433748..2435070 /locus_tag="PA2214" /db_xref="GeneID:878579" CDS 2433748..2435070 /locus_tag="PA2214" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_250904.1" /db_xref="GeneID:878579" /translation="MSAMNDHARLLSSAIATSRLRLLPFLVLMYVLAFIDRANVGYAR AFLQADTGLGDAAFAFGASIFFIGYACFEVPSNLMLHRLGARVWLCRIMVTWGLVSAA MMFADDAMTFYVLRFLLGVAEAGFFPGIILYLTYWFPQRSRAQALGLFYFGLPLALVL GGPLSGWLLEFHGIFGLANWQWLFVTEGLLASLVGIAAYFYLVDRPRDAGWLSDEQKR ALEGELAEEDTRKQARGPHGFLSALRSGQVLKFCLVYFTIQMSVYGVVFYLPTRIASF LDGQVGLNVGLITAIPWVCALVVTRLVTRQADRSGQHRQLAVAMLGMAAAGIAASALA GNLGLAVIAFCFAASGFVSVQPLFWTLPTGYLSGAAAASGIALINSLGNLGGFVAPNL KTLMESQFADPRAGMFALAAVGLLGACLLARLKTSGSSSVPLRARQAG" misc_feature 2433802..2435019 /locus_tag="PA2214" /note="Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; Region: MFS_ExuT_GudP_like; cd17319" /db_xref="CDD:340877" misc_feature order(2433844..2433849,2433856..2433861,2433868..2433870, 2433964..2433966,2434114..2434119,2434123..2434131, 2434138..2434140,2434198..2434200,2434207..2434212, 2434219..2434221,2434510..2434512,2434519..2434524, 2434531..2434539,2434546..2434548,2434633..2434635, 2434645..2434647,2434795..2434800,2434810..2434812, 2434822..2434824,2434870..2434872,2434879..2434884, 2434891..2434896,2434903..2434905) /locus_tag="PA2214" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340877" gene 2435101..2436276 /locus_tag="PA2215" /db_xref="GeneID:877774" CDS 2435101..2436276 /locus_tag="PA2215" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250905.1" /db_xref="GeneID:877774" /translation="MKIKSVRTRVFEWKGKVVPPQAHFCTNASDILFEKGDAMGSFRF HGWLVVEIETDDGLVGIGNCALAPRVAKEIVDLYLAPICIGEDPFDNEYIWQKMYRRT HAWGRKGIGMAAISAVDLAIWDIMGKAVNKPVFKLLGGRTKEKIWTYASKLYANDNLD AFLEEAQGYLNQGFTALKMRFGYGPKDGPTGMRRNIEQVRALRELAGPDIDIMLECYM GWTLEYARRMLPKLAEFEPRWLEEPVIADDIEGYVELKKMGIMPISGGEHEFTGHGFK DLLERRAVDVIQYDTNRVGGITAARKINAMAEAWSVPVIPHAGQLHNYHLTMASTASP MAEFFPVFDVEVGNELFYYVFKGEPQPVDGYIQLDDHKPGLGLEISEEHLKDFIIIE" misc_feature 2435230..2436240 /locus_tag="PA2215" /note="Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 2. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic...; Region: MR_like_2; cd03327" /db_xref="CDD:239443" misc_feature order(2435545..2435547,2435632..2435634,2435638..2435640, 2435743..2435745,2435815..2435817,2435821..2435823, 2435899..2435901,2435968..2435970,2436049..2436051, 2436109..2436111) /locus_tag="PA2215" /note="putative active site pocket [active]" /db_xref="CDD:239443" misc_feature order(2435743..2435745,2435821..2435823,2435899..2435901) /locus_tag="PA2215" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:239443" gene 2436304..2437299 /locus_tag="PA2216" /db_xref="GeneID:878287" CDS 2436304..2437299 /locus_tag="PA2216" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250906.1" /db_xref="GeneID:878287" /translation="MRLIQFEDRAGQRRVGVVEGAGIQVLRGVRSTRELGLAAIRAGS GLHDEVLRRGSEPGPDYAGLLEEGRVLPPLDHDDPAHCLVSGTGLTHLGSAATRDRMH QQNQGDETALTDTMRIFRWGLEGGKPPAGQVGAQPEWFYKGDGGIVVRPGADFPLPAF AEDAGEEPELVGLYLIGDDRRPYRLGYALGNEFSDHLMERRNYLYLAHSKLRACCYGP ELRVGELPRHLQGESRILRDGEVLWQQAFLSGEDNMCHSLENLEYHHFKYAQFLRPGD VHVHYFGTATLSFADGIKAAPGDVFEIAMAEFGAPLRNGIAAVETALTPGRVVAL" misc_feature 2436304..2437296 /locus_tag="PA2216" /note="Uncharacterized conserved protein GguC, FAA hydrolase family [Function unknown]; Region: GguC; cl43951" /db_xref="CDD:479436" gene 2437428..2439011 /locus_tag="PA2217" /db_xref="GeneID:880618" CDS 2437428..2439011 /locus_tag="PA2217" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase" /protein_id="NP_250907.1" /db_xref="GeneID:880618" /translation="MTAILGHNFIGGARSAAGTLFLQSLDAASGEALPYRFVQATPEE VDAAAEAAASAYPHYRQLPASRRAEFLDTIAAELDALDDDFVAIVCRETALPATRIQG ERSRTSGQLRLFAEVLRRGDFHGARIDRARPERKPLPRVDLRQCRIGLGPVAVFGASN FPLAFSTAGGDTAAALAAGCPVVFKAHSGHMATAERVAAAILRAAERTGMPAGVFNMI YGGGVGERLVRHPAIQAVGFTGSLKGGRALCDMAAARAQPIPVFAEMSSINPVVLLPA ALKKRGEAVADELSASVVLGCGQFCTNPGLVIGIRSAQFSAFLERFAARMDDQPAQTM LNTGTLASYEKGLAALHAHPRVRHLAGQPQEGRQARPQLFQADVSLLLEGDELLQEEV FGPASVVVEVADHAELKRALHGLHGQLTATLIAEAEDLASFADLVPLLEQKAGRLLLN GYPTGVEVCDAMVHGGPYPATSDARGTSVGTLAIDRFLRPVCYQNYPDAWLPEALKDG NPLGIARLVDGIVTRAAVA" misc_feature 2437602..2438912 /locus_tag="PA2217" /note="Alpha-Ketoglutaric Semialdehyde Dehydrogenase; Region: ALDH_KGSADH; cd07129" /db_xref="CDD:143447" misc_feature order(2437608..2437610,2437812..2437814,2437854..2437856, 2437860..2437862,2438163..2438165,2438172..2438174, 2438664..2438666,2438727..2438729,2438739..2438741, 2438751..2438753,2438757..2438768,2438772..2438774, 2438796..2438798,2438811..2438816,2438826..2438831, 2438889..2438894,2438898..2438909) /locus_tag="PA2217" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143447" misc_feature order(2437902..2437904,2437980..2437982,2437986..2437991, 2438100..2438102,2438139..2438141,2438148..2438150, 2438157..2438159) /locus_tag="PA2217" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:143447" misc_feature order(2437905..2437907,2438217..2438219,2438319..2438321, 2438328..2438330) /locus_tag="PA2217" /note="catalytic residues [active]" /db_xref="CDD:143447" gene complement(2439150..2440253) /locus_tag="PA2218" /db_xref="GeneID:879452" CDS complement(2439150..2440253) /locus_tag="PA2218" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250908.1" /db_xref="GeneID:879452" /translation="METKHSNRARSRKGALRGAVLAGALMALVGCQTSPAATTSSNTG GTNMQLQLTQEWDKTFPLSAKVEHRKVTFANRYGITLAADLYLPKNRGGDRLPAIVIG GPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASPDINTEDFSAAVD FISLLPEVNRERIGVIGICGWGGMALNAVAVDKRVKAVVTSTMYDMTRVMSKGYNDSV TLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPR AVNSGNAWTMTTPLSFMNMPILTYIKEISPRPILLIHGERAHSRYFSETAYAAAAEPK ELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL" misc_feature complement(2439153..2440079) /locus_tag="PA2218" /note="Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; Region: FrsA; COG1073" /db_xref="CDD:440691" gene complement(2440347..2441555) /gene="opdE" /locus_tag="PA2219" /db_xref="GeneID:878599" CDS complement(2440347..2441555) /gene="opdE" /locus_tag="PA2219" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator OpdE" /protein_id="NP_250909.1" /db_xref="GeneID:878599" /translation="MTTRALDTANENPEQSGSWSGVLAIAVCAFALVASEFLPVSLLT PIANDLGTTEGMAGQGIAISGAFAVLTSLFISSVAGSLNRKTLLLGLTAAMGMSGAIV ALAPNYFVYMLGRALIGIVIGGFWSMSAATAMRLVPANDVPRALALVNGGNALATVVA APLGAWLGTLIGWRGAFLCLVPVALVALAWQWTTLPSMRAGARAPGPGNVFTVFALLK RPGVMLGMLASSLFFMGQFSLFTYVRPFLETVTGVHGAHVSLVLLVIGAAGFIGTLLI DRVLQRRFFQTLVAIPLLMALIALVLTVLGGWPAIVVVLLGLWGLTGTSAPVGWWAWI ARVFPEDAEAGGGLFVAVVQLSIALGSTLGGLLFDRTGYQATFFASAAMLLIAAFLTI LTARSKAPAG" misc_feature complement(2440362..2441504) /gene="opdE" /locus_tag="PA2219" /note="purine ribonucleoside efflux pump NepI; Region: nepI; PRK10213" /db_xref="CDD:182309" gene 2441771..2442691 /locus_tag="PA2220" /db_xref="GeneID:879199" CDS 2441771..2442691 /locus_tag="PA2220" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250910.1" /db_xref="GeneID:879199" /translation="MIKRNLNDLLSFVAVAREGTFTRAAAQLGVTQSALSQSISGLEA RLQIRLLTRTTRSVSPTAAGERLLNAIGNRFDEIEAELDELSALRDKPSGTVRITCGD HIQRTLLLPRLTPLLLEYPDIKVEFDINYGFRDIVADRFDAGVRLGDTIDKDMIAVPI GPPVRMAVVAAPAYFAAHPKPRSPRDLVDHNCINMRMQSGGGLYAWDFQRKDRHVNVR VDGQLIFNTSPNIVDAALAGLGIAWLPEEEFAPHIEEGRLLRVLENWCPLFPGYYLYY PNRRQPSPAFSLVVDALRYTRPRGTTIGGG" misc_feature 2441786..2441965 /locus_tag="PA2220" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 2442044..2442649 /locus_tag="PA2220" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold; Region: PBP2_CrgA_like_5; cd08474" /db_xref="CDD:176163" misc_feature order(2442080..2442082,2442092..2442094,2442209..2442211, 2442251..2442253,2442260..2442262,2442452..2442454, 2442503..2442505,2442584..2442586) /locus_tag="PA2220" /note="putative effector binding pocket [active]" /db_xref="CDD:176163" misc_feature order(2442083..2442088,2442098..2442103,2442107..2442112, 2442119..2442121,2442131..2442133,2442137..2442157, 2442341..2442343,2442434..2442448,2442467..2442472, 2442479..2442481) /locus_tag="PA2220" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176163" gene 2443161..2444366 /locus_tag="PA2221" /db_xref="GeneID:880739" CDS 2443161..2444366 /locus_tag="PA2221" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250911.1" /db_xref="GeneID:880739" /translation="MTAATCGWVTMSMRELDRLKVIEAIIEGRLKPAAAAQRLRLTTR QVHRLVLRYREDGPAGLTSRRRGQPSNRQLSPGLENPAISLIRRNYSDFGPTLAQEKL VECHGLKLAKETVRRIMVDAGMWVPRKQRPPKVYQPRNRRACCGELIQIDDGKPLAFY SDKASVFRSNHKAPQGGDGYTQFGRAMYELNIESCANSSQAKGRVERANLTLQDRLVK ELRLRGISNMADANAFAAHFMASYNARFAKPPRSEHDCHRPLHSDEDLELIFAWREAR RVSQRLTVQYDKVLYLLADTPQSRRLAGDHVDDLPLPEWPHRAQGGRHRPPLYHLRQT LRDRPGCHRREQALGSCAASRPARPSAARQSALAIGTGKSAAVNARQDAVEEGAARTD AGRYRRCPG" misc_feature 2443218..2444084 /locus_tag="PA2221" /note="ISNCY family transposase; Region: transpos_ISNCY_2; NF033594" /db_xref="CDD:468103" gene complement(2444886..2445533) /locus_tag="PA2222" /db_xref="GeneID:879580" CDS complement(2444886..2445533) /locus_tag="PA2222" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250912.1" /db_xref="GeneID:879580" /translation="MAEINIYQNPGQSLANIYKGFARQCNPGFVFPEAQTIEAWDIPL RLHPEFIPGGDISKADQQYSTLLAQEIANGVTIGFRMVNEKERVCNVEILPLLTSMAQ NLDRIKARFGSGYLDRFKGSPNVYPTDVGFSTDASGGISQESGLLVSYGVNLRTLTPG TWQAMTLPEDIKALVGPGVGLRLDAPNFSDVFNTIKSGLRYTTAVTLLLAYFAAI" misc_feature complement(2444889..2445527) /locus_tag="PA2222" /note="Protein of unknown function (DUF3218); Region: DUF3218; pfam11508" /db_xref="CDD:402901" protein_bind 2444899..2444911 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(2445545..2446564) /locus_tag="PA2223" /db_xref="GeneID:879227" CDS complement(2445545..2446564) /locus_tag="PA2223" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250913.1" /db_xref="GeneID:879227" /translation="MNRELDQTLQRNLERLYNYLENPEREEAQRVLLAAEPEPIRITH GIPDLYTDWLSSPSYSAQGGLTGQLTQVISQTAGRPVLVFDDYFKVHEVTIRTVAETG GANSISVSDLQVQLNQQINTFIQDRIDGDKADKVSRLQSNISYLIEMGINIDFTARHE LPPGGRGNRATIPTSDPNGESGVTIGYGFDVGQHDESGIQALNIAESTRKKIRPALGL KGANTATFQALAQLIPVLTDEDGLSLFTAKMIKVTDRMKVKFQQWSTLPPAVKTIVTD LYYHYGEYSSFPNFETAISQSDWLAAIRELRNWNGTPNSTDPSDGIARRLNNRADYLQ RSLGL" misc_feature complement(2445566..2446114) /locus_tag="PA2223" /note="lysozyme-like C-terminal domain of pesticin; Region: pesticin_lyz; cd16902" /db_xref="CDD:381621" protein_bind 2446106..2446124 /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /note="Transcription factor binding site for NP_253452." /bound_moiety="Fur" gene complement(2446597..2447325) /locus_tag="PA2224" /db_xref="GeneID:879713" CDS complement(2446597..2447325) /locus_tag="PA2224" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250914.1" /db_xref="GeneID:879713" /translation="MKLKSISIFAILTLYYNITLCVAEEPKSYFPPGDYYRTGNSGLL TISPLFEGLQKFRIRSTGHNAHACGLNGTIESGHVQVDVRGIGDMSCDVVFKLNDDRI TIEKGAASRDCQGFCGAAAGFTGTYWKPSPICEPASIRFNDKQVKKALKNNETEKAYW ISRKLITECRDMFEGFGYLSRVFHTAHLSLSAKNHQCKKILEKGSFFRDLKREYLPEK MQNEYDKYSTEFNRLESECEQSMK" gene complement(2447573..2447989) /locus_tag="PA2225" /db_xref="GeneID:882296" CDS complement(2447573..2447989) /locus_tag="PA2225" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250915.1" /db_xref="GeneID:882296" /translation="MRIVCLLVLLSLIGGCSHSVTLQERAEQEAIFIQEFRQEFAKRL RYPLFAPGDEIPEADVMVFFRFASSSGRISSCRVQYGAGNDKSRSTLDEVFAKRVIAT CREPDLPVAPPALLDGGGGFSFKQRVMFRKEVERLR" gene complement(2448033..2448533) /locus_tag="PA2226" /db_xref="GeneID:878006" CDS complement(2448033..2448533) /locus_tag="PA2226" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250916.1" /db_xref="GeneID:878006" /translation="MNFNNRNNQILSMIAETQFDAYVLGYIAKARTISIADDSLRIEA EGSAMLAGLISDSCRKRRTQKNPFPYLLLQIAHEALDRIRLNLANIRNISSADALYKE LLSQAAWDASVAMDNISEFVEPDQGGVRVIERLVEFAHNSGIAEGQNLALEALAVLGL DVKSHF" gene complement(2448568..2449545) /gene="vqsM" /locus_tag="PA2227" /db_xref="GeneID:882297" CDS complement(2448568..2449545) /gene="vqsM" /locus_tag="PA2227" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="HTH-type transcriptional regulator VqsM" /protein_id="NP_250917.1" /db_xref="GeneID:882297" /translation="MVTEHIFDFEWRPLQNYLRDRDIAIPPFAAEQESRSDALYNWIV SKGYSGKEGLNLGTYYHISDYGVIGLALLCAENVGDILKVIRAYVKLFNRDIANVGVK PRENYEVEIHISVNFKPEWNDASRQFHVNVIASATYKLIMDLLGNDFPISALTVPVHG ADKTIYEGFFSLPVKHEGNDIIFSFPAHQLNRTLATANPAVFQSALTMAGESFNALLE VEMGGLRQRIELFLDSIPDQYPSLVTTAKYLRMNERTVRRRLADEGCTYRQIVDKARK ERAIALLLNSSIPVDRISDILGYSETASFRHAFRRWTGQSTTEFRNSFH" misc_feature complement(2448571..2449227) /gene="vqsM" /locus_tag="PA2227" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" gene complement(2449554..2450765) /locus_tag="PA2228" /db_xref="GeneID:879512" CDS complement(2449554..2450765) /locus_tag="PA2228" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250918.1" /db_xref="GeneID:879512" /translation="MINKRNAIFLSMILIFFSIACIGSAGVRVWNFYTLFDSGKIAEN FRAMPRLFNSVPIKKSGAAHFFEKNLRDMPGSFSFQGHEIGFKDWLASSNTTGLIVLS DDRIAFEEYYLGNSAKSLAIGWSLSKSLMSLLIGMAVDEGSIHSLLDPVNLYAPQLSA GGYAGVSLRDVLEMSSGIAFSEDYGNSDSDINQLGRTIALGGSVNEKVSSLRREDAPG RVHHYVSVDTQVLGMVLLGATGMGPSQFMNQRLWPQLGAECEGAWLTDDRGTELAFGG VNLCLRDFARIGLLFLHGGRSLTGSQIVSAEWVKASTKPRSAHLRPGRYIEDGEPNLG YGYQWWIPEGKEGEFLAIGVYGQFIYVNPLRRVVIAKTSAYVDYNVDGIRMEHEALAA FRAISRTVGVR" misc_feature complement(2449581..>2450363) /locus_tag="PA2228" /note="CubicO group peptidase, beta-lactamase class C family [Defense mechanisms]; Region: AmpC; COG1680" /db_xref="CDD:441286" gene 2451707..2452426 /locus_tag="PA2229" /db_xref="GeneID:880669" CDS 2451707..2452426 /locus_tag="PA2229" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250919.1" /db_xref="GeneID:880669" /translation="MPLPALPLDALLTGRARPFTRPGSRSGIAKSPRDGALRVTPVGL EGDEQGDLRVHGGVEKAIHHYPREHYAAWIAELGEHPLLMQAGAFGENFSTSGWSEAD VCLGDRVRAGTALLEVSQGRMPCWKLNDRFEVAGMSLRVQESGRTGWYYRVLEEGVVA AGDILQLVERCHPDWSLLRLSEVLFDRRADAELLRQCLPLPLTPSWRRTLERRLEKGQ VEDWGPRLEGAPGQAETPRPT" misc_feature 2451773..2452237 /locus_tag="PA2229" /note="N-hydroxylaminopurine reductase YiiM, contains MOSC domain [Nucleotide transport and metabolism, Defense mechanisms]; Region: YiiM; COG2258" /db_xref="CDD:441859" misc_feature 2452229..2452357 /locus_tag="PA2229" /note="3-alpha domain; Region: 3-alpha; pfam03475" /db_xref="CDD:460938" gene 2452469..2453140 /locus_tag="PA2230" /db_xref="GeneID:879728" CDS 2452469..2453140 /locus_tag="PA2230" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250920.1" /db_xref="GeneID:879728" /translation="MHGVPESGYKAPALSDPDVCQRTPFMLRLSMPALLLALAGCATK PPANPDNLCEIFREKPKWHEAALKMQQRWGAPVQVPMAMMYQESSFKHDALPPRYYFL GFIPWGRVSSAYGYAQAKDETWADYKREAGGWGASRDDFADALDFMGWYIQKSQRVNG VSKWDAYGQYLNYHEGWGGYRNRSYDAKPWLKNVSQKVQSRASLFGAQYRSCQQELSR GGWFW" misc_feature 2452586..2453134 /locus_tag="PA2230" /note="Predicted transglycosylase, contains SLT domain [General function prediction only]; Region: SLT; COG4764" /db_xref="CDD:443796" protein_bind 2453398..2453413 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA2242, PA2241, PA2240, PA2236, PA2237, PA2234, PA2235, PA2232, PA2233, PA2231, PA2238, PA2239'" /bound_moiety="LasR" protein_bind 2453505..2453520 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA2242, PA2241, PA2240, PA2236, PA2237, PA2234, PA2235, PA2232, PA2233, PA2231, PA2238, PA2239'" /bound_moiety="LasR" gene 2453667..2455103 /gene="pslA" /locus_tag="PA2231" /db_xref="GeneID:879717" CDS 2453667..2455103 /gene="pslA" /locus_tag="PA2231" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="biofilm formation protein PslA" /protein_id="NP_250921.1" /db_xref="GeneID:879717" /translation="MHSKSVDSLSLTRAGFIEYFLVATKLVHALTAIAPALFLLYYPG LVPVELRSNMLGLLLFFGALTVIMFQALDVYSDDIFSNRLRFRIMFFAWASAFCLLLF MYQGLGLFPYLSSKLVIFWFTGSLLLFGVQRLLVLRLYRAWMKRGMYLQRTVILGFTE SGMHLAEYLVRNHDIRSGIIGFIDDRSERVPENYNSLPLLGNTKDLEKLIRQEQVDQV LVALPWFAEGRIGAIVHRLRQLPVNVLLVPDMAAFRHAHNRIVDVSGIPMFNASELPL RGWSPLIKRCEDLVLASIALVLFAPLMALVALAIRLDSKGPVLFRQKRYGYNNRLIWV FKFRSMYTERTDANAERQTTRDDDRITRVGRFIRKTSIDELPQLFNVLAGSMSMVGPR PHATATKAAGIPFEEAVSEYSSRHRVKPGITGWAQINGYRGETDTLHKIKKRVEYDLE YIAKWSVWFDLYILFRTVPAVLLTKEVY" misc_feature 2453859..2455100 /gene="pslA" /locus_tag="PA2231" /note="Undecaprenyl-phosphate glucose phosphotransferase; Region: WcaJ_sugtrans; TIGR03023" /db_xref="CDD:274396" gene 2455103..2456569 /gene="pslB" /locus_tag="PA2232" /db_xref="GeneID:880925" CDS 2455103..2456569 /gene="pslB" /locus_tag="PA2232" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="biofilm formation protein PslB" /protein_id="NP_250922.1" /db_xref="GeneID:880925" /translation="MNAVAPLIPCIVSGGSGTRLWPVSRESMPKPFMRLADDQSLLQK TFLRIAGLPDVARLLTVTNRDLLFRTLDDYRAVNRSGLAQDLLLEPVGRNTAPAIAAA ALHVQEHFGDQAQLLILPADHLIRDEQAFAAAVAEARGLAAQGYLVTFGITPERAETG FGYIEQGAPLGNGFRVARFVEKPDQATAQSYLDSGKYLWNAGMFCFQAATVLQELERH APEVLIAARAALADGSSLENGQCRQRELAAGAFAEAPDISVDYALMERSDKVAVVPCS IGWSDIGSWQALRELSAADENGNQVRGESVLHDVSNCYIDSPKRLVGAVGVHDLIIVD TPDALLVADAARSQDVKFVAQELKRRGHDAFRLHRTVSRPWGTYTVLEEGRRFKIKRI VVRPKASLSLQMHHHRSEHWIVVSGMALVENGEREFLLNTNESTFIPAGHSHRLSNPG IIDLVMIEVQSGEYLGEDDIVRFNDIYGRAPASDEKKA" misc_feature 2455121..2456539 /gene="pslB" /locus_tag="PA2232" /note="Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Region: Glyco_tranf_GTA_type; cl11394" /db_xref="CDD:472172" misc_feature order(2455136..2455138,2455142..2455144,2455466..2455468) /gene="pslB" /locus_tag="PA2232" /note="Substrate binding site [active]" /db_xref="CDD:133003" gene 2456569..2457480 /gene="pslC" /locus_tag="PA2233" /db_xref="GeneID:878103" CDS 2456569..2457480 /gene="pslC" /locus_tag="PA2233" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="biofilm formation protein PslC" /protein_id="NP_250923.1" /db_xref="GeneID:878103" /translation="MRCALVIPTRNAGAHLDRLLPALAAQRRQPDSILVVDSRSSDDT VERFRAFGARVEVIEPASFNHGGTRRWASQQVEADALIYLTQDAIPASPDSFANLLDE LYAEADIGVAYGRQLPHPGAGLLGAQARRFNYPPESRSKRLADASELGIKTCFSSDSF SAYRSDALAAVGDFPEDVIGSEDAYVAARLLQAGYAVRYAASAEVYHSHDYRLLEEFR RYFDIGVFYGRERWIRAAFGGAGGEGKRYVLAEIQALRAAGALYRVPEIALRSAFKLL GYRLGQLERHLPVALKRRISMFPGYWK" misc_feature 2456569..2457342 /gene="pslC" /locus_tag="PA2233" /note="Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]; Region: WcaE; COG1216" /db_xref="CDD:440829" gene 2457510..2458280 /gene="pslD" /locus_tag="PA2234" /db_xref="GeneID:878051" CDS 2457510..2458280 /gene="pslD" /locus_tag="PA2234" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="biofilm formation protein PslD" /protein_id="NP_250924.1" /db_xref="GeneID:878051" /translation="MKRTLLMLAMLALAACNTPARIPAPDSDTVDSGKRALEELARLP PAMERVRVGDTLRIVRDAGEMPTLSAFNVATIYELTLYTVLNDGSIYYPFIGRIQAAH RTPQEIANELTTKLAPIYREPRVTVNINQAPGNTVFVGGAVRNPSAVPIPAANNMEQA ILGAGGILPVGDARRVALMREDSEGRYHAYFLDFSQLMKIGPEGRKPLAMQRGDIVFV PKSMVGDRIEGVDVYLNQLLPFAKSIGVGVSYTVNNDR" misc_feature 2457654..2458172 /gene="pslD" /locus_tag="PA2234" /note="Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold [Cell wall/membrane/envelope biogenesis]; Region: Wza; COG1596" /db_xref="CDD:441204" gene 2458295..2460283 /gene="pslE" /locus_tag="PA2235" /db_xref="GeneID:878490" CDS 2458295..2460283 /gene="pslE" /locus_tag="PA2235" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="biofilm formation protein PslE" /protein_id="NP_250925.1" /db_xref="GeneID:878490" /translation="MIEIRSLRDLLRLLFIYQREFKLAALSAVVIIVLGAFLLPAKYE SNARLLVKPGRDSTLPIEISNRQALVMPSTQRDPIVDEERLLTGRPIVRQVAERYLEV LANRPPPEGLWKRTKFYVKKAIGAVFDGIRVTLETFGVIEETTAVERLAKDLEKKFEV THAAGSTVMEISFTWSEPEVAQEVVKAWIEIYMEERTQALGRKSLYAFYEAQTADSAA QIKSYKAQILKHLNEIGASSIEDRLQDLSERINVLRGERFNSIRLIASSDSALESTRQ QLKGLPREIVTVRQIALNPAQQDLRRLLNQKRLERADMMRTYTDDAPPVKALDASIRA LEKEVQDEGATVQSSEDRAPNTLTTHLERVLLDETSNNAALRTQLAEQEKQLAELEAQ RREALDIEPTLARLQRELNATERNYALYVDSLEKSRIDRELDKSQISNISVIEEATYN PGRIFPKTLLMLFLAVPFGLAVGLLVVYLCYLLDQRIHDGGLVEEKFGLPLWTTLPEL SNSTAESSNAFTASIYRLYGLLPYARIEEKGLTLGLTSARHGEGVTFIIEQLRRLLEE NGVRVRIGGEPAQPGEVVLLDAPALLDSREAFIALRRADLIALVVEAQKSTVPVVEHA LTILTTAFGKVDGIIINRRRFEVPSKVLQTIARYRSAF" misc_feature 2458340..2460241 /gene="pslE" /locus_tag="PA2235" /note="Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; Region: GumC; COG3206" /db_xref="CDD:442439" gene 2460283..2461470 /gene="pslF" /locus_tag="PA2236" /db_xref="GeneID:878020" CDS 2460283..2461470 /gene="pslF" /locus_tag="PA2236" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="biofilm formation protein PslF" /protein_id="NP_250926.1" /db_xref="GeneID:878020" /translation="MRIALLAPLPPEKNGIADYASHFRNALQGLGIEVATPLAGVAAD SANIASRLDSVDWNAFDLVHAELGGGRLGEFIALRELRKRFPRLPLSATVHDPERMVW RRERLPWPLNLLERLPSPLPQAAVVLADPLTLREERAVAQGLTRLVTLTGLGGECLAR RMRLPPGRVEVINHGNLEIATVPLPSLDTLRLLYFGFIYRGKGIEDLLEALADLFASA PEMRQRVRLTLAGGTAAEMAFGAGGNYLYQLKAQIAELGLADAIDWNLNLAAADIPRT IQAHHVMVLPYRESKKLGLLGQQRGTSGALSWAAACGRGAITSDARAFAEEVASGNGA IYPQGDVAALSEQLLNLAREPRLAQAWAERAGAIGHARTWPRTALRFQALFNDMVGTV HGT" misc_feature 2460286..2461440 /gene="pslF" /locus_tag="PA2236" /note="mannosyltransferases of glycosyltransferase family 4 and similar proteins; Region: GT4_mannosyltransferase-like; cd03822" /db_xref="CDD:340849" gene 2461460..2462788 /gene="pslG" /locus_tag="PA2237" /db_xref="GeneID:879704" CDS 2461460..2462788 /gene="pslG" /locus_tag="PA2237" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="biofilm formation protein PslG" /protein_id="NP_250927.1" /db_xref="GeneID:879704" /translation="MARKGLYLGGSALLLAVVLLLVFWGRPADAEIQVLKAPRAVVWK DFLGVNAQFLWFSPERYNKQIDRLQDLGLEWVRLDLHWDRLETAEDQYQLASLDQLVK DLEARQLKSVFYLVGSARFITTAPFYSPFQDQYPPRDPEVFARRMAMLSQRYPSVAAW QVWNEPNLIGFWRPKADPEGYAKLLQASTIALRMVDPEKPVVSAGMAFFSEMPDGRTM FDALGHLGVESLGTIATYHPYTQLPEGNYPWNLDFVSHANQINRALRNAGVPAIWSTE WGWSAYKGPKELQDIIGVEGQADYVLRRLALMSALDYDRIFLFTLSDLDQRASVRDRD YGLLDLDANPKPVYLALQRFLKVTGPKLRPADPPVTEDLPDGSFSIGWTREDGRNVWL FWSARGGNVRLPKLKEATLHDPLSGKVTPLSGSDGLEVPVKSSLQMLVWE" misc_feature 2461595..2462521 /gene="pslG" /locus_tag="PA2237" /note="Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism]; Region: COG3934" /db_xref="CDD:443135" gene 2462797..2464005 /gene="pslH" /locus_tag="PA2238" /db_xref="GeneID:883079" CDS 2462797..2464005 /gene="pslH" /locus_tag="PA2238" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="biofilm formation protein PslH" /protein_id="NP_250928.1" /db_xref="GeneID:883079" /translation="MRILWILPYSPWPTTSGGKTRQYHLLRSLAARGHRITVLLHSKQ PVSAEDRQALEPFLERLVVLPRRPLRSLSTLLAALFAPYPLLASVNGLSAELQRTATE LLREPWDVVQVEHSYSFQPYERPLRDAGQPFVLTEHNVESSLGAATYDRLPGWALPFV RYDQWRYRRWERRVMSQAAAVVAVTEKDARQLGAMLGRPVPVVVNGVDCEHFATARPT PEAQRVLFLGNYEYAPNVDAVEWMLDEILPRVWAHCPEARMSVCGYALPAEWAQRWSD PRIEWQGFVPDLLQLQSSSSVFLAALRHGGGSKLKVLEALAAGLPLASTAQGVSGLEL RDGEDYLGGESAEQLANAVVRLLQDPAQARALGENGRAYVRRAHDWSVAASQLEQVYA GLAEGAPACA" misc_feature 2462800..2463969 /gene="pslH" /locus_tag="PA2238" /note="phosphatidyl-myo-inositol mannosyltransferase; Region: GT4_PimA-like; cd03801" /db_xref="CDD:340831" gene 2463996..2465099 /gene="pslI" /locus_tag="PA2239" /db_xref="GeneID:882276" CDS 2463996..2465099 /gene="pslI" /locus_tag="PA2239" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="biofilm formation protein PslI" /protein_id="NP_250929.1" /db_xref="GeneID:882276" /translation="MRIGLDYRTVGSSPHSGISRQVYAMEQALESLPGTQVTRFTVAP LDDPLRQRAVCPPWGCPRTAMHQPHQRLRFEAGFLPRALREQDIDLYISTFNMGLPLP PRPPGVRYALLIHDLFQITLKNYHANRLKALVYRVSDYLSIAYALRVADRVWTPSQYS ADEAVRLFPGVAGKVRVLPNQVDGFAGEPADLSARGLPPRYWLLVGTRELRKNVPWFV SAWTRARAQAPGVPPLVLVGSLDHLPEEQRGLPGLHALGGLDDAELHALYRQAERLWQ PSYAEGFGLPVVEALSVGTPVAVASGTSLDEVTPPSAPRFSPSDGAALERLMLRLADA PREASAEELIAWAARFNREAYRQRLAALIEELS" misc_feature 2463999..2465078 /gene="pslI" /locus_tag="PA2239" /note="glycosyltransferases MtfB, WbpX, and similar proteins; Region: GT4_MtfB-like; cd03809" /db_xref="CDD:340838" gene 2465102..2466538 /gene="pslJ" /locus_tag="PA2240" /db_xref="GeneID:882251" CDS 2465102..2466538 /gene="pslJ" /locus_tag="PA2240" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="biofilm formation protein PslJ" /protein_id="NP_250930.1" /db_xref="GeneID:882251" /translation="MSLGNLVAVVFGLAFGGALLMLSPAKAGAAMVGLAAAVTILRFP FWGLLLFALVATFMPYSTVNVGIRSTVSEAILALTWGAVLWHIFLSRLPPAPALRYRS TERMLLWLMLFTVLPFVVGQVSIKAEASGLSNWLRWLLNLSIVFLAGRLLVERKNRET LVIALLLGTLAMLLMSIAVFIRYRSASGMAPILAMFNYANLDTLKFGLEALSSRMGSP WMHPNATGGIMALLLPLAFCYGVANQGWRRGLGLAVAVLGAAAILLASSRGAMLSLAV VLFWMSLRKVPYTGRLLLLGVGLVVVLVLSYPPLQERLATIFSPQNASTEVRFDEYRM FPKAVARYPLGIGFKVDPPVPGTDLLGISNLWLNFMYKVGLGGMLLFIAVTWRWWREA RPEKGPIRLTRDNAIWLGSTGGILAALVSGLFDHYFSFAVVMIGLFWLLVGINLLEAR RLFPERQPQPRAVGYRKLKRQLERGAEA" misc_feature 2465753..2466433 /gene="pslJ" /locus_tag="PA2240" /note="O-antigen ligase [Cell wall/membrane/envelope biogenesis]; Region: RfaL; COG3307" /db_xref="CDD:442536" gene 2466540..2467949 /gene="pslK" /locus_tag="PA2241" /db_xref="GeneID:880828" CDS 2466540..2467949 /gene="pslK" /locus_tag="PA2241" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="biofilm formation protein PslL" /protein_id="NP_250931.1" /db_xref="GeneID:880828" /translation="MLGSAFWLTLATLLGLCLGFAREWLLVASWGAGERSDAFLIALF LPEALRMSLAGGVLSAAALPLFLERQGERRLDWLAAILPALLGIAVALSLLLLAAAPW LVRLLGPGLAETASAQAAANLRVLAWCVPGLMLHALFSIPLQAAERFVLAGLGSLLFN LPPVLYLALHGQASQPEQLALACLLGSLLMPLVLLPSLWIEGWRPWHWRLSGVELGEL GGRIAPLLLSNAASQGLALVERLVASLLGEGAVTWVNLARKLMNLPLIALMSLNQVLL GMMSRRQGGERLALLRRGLETASLLTLPAGVGLVAAAPGLVALLLPRQTAGSPLPALL AWFAVPLVFGAWNALLARYAYAAGDTRLPLRCELLGSALNAALLAVLPLIFGLPGIPL AALGGVLCTALLLMRRQALLGALPWARLWLLNALAMALAAGLLFRIDGIWLQLGLGTV AGCLALLGMALWLRPWRTD" misc_feature 2466567..2467760 /gene="pslK" /locus_tag="PA2241" /note="Multidrug and toxic compound extrusion family and similar proteins; Region: MATE_like; cl09326" /db_xref="CDD:447704" gene 2468032..2469099 /gene="pslL" /locus_tag="PA2242" /db_xref="GeneID:880701" CDS 2468032..2469099 /gene="pslL" /locus_tag="PA2242" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250932.1" /db_xref="GeneID:880701" /translation="MKKRWIQMDVTRGVGILIIVFGHSWFVASSPTVLYPLLSPFILP LFFFISGVFFRTEQPFGEMALRKADALLKPFFVTMLGYVILRDLLRGQPLLPDIGGVL YASVDTLPWQALWYLPHFWVATLFAWFMLRVIQRLGLSLAASCVLLAVQLGLGILFLK TFWQIPVEFGGEQYLLPGLPFSLDITLISSAHFMFGYVLRDVLRRHQSSLLTLCIALA VTTASFLYYPTVVDMAQRRYDHWFWATVQAVSGVYLCWALSGLMMKIDWLGKAMTYIG QSTLILLIFHGEIQHKTFNLLVHLGLSEPAAASVALVISVIVSLLIGEVIKRVALLRA LYFPFPVRKKTAAVQGGGEAR" misc_feature 2468032..2468892 /gene="pslL" /locus_tag="PA2242" /note="Fucose 4-O-acetylase or related acetyltransferase [Carbohydrate transport and metabolism]; Region: NolL; COG3594" /db_xref="CDD:442813" gene 2469286..2471019 /gene="pslM" /locus_tag="PA2243" /db_xref="GeneID:878322" CDS 2469286..2471019 /gene="pslM" /locus_tag="PA2243" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="FAD-binding dehydrogenase" /protein_id="NP_250933.1" /db_xref="GeneID:878322" /translation="MTSAAVETTPLTCDVLVVGSGAAGLAAAVTAAWHGRRVVLVEKD PVFGGASAWSGGWAWLPRNPLARRAGIEEDIEQPRTYLRHELGERYDAARIDAFLEAC PHMVAFFERHTHLRFVDGNGIPDMHGDTPGAAEGGHQLVAAPYDARQLGPLLPRLRKT LRETSFMGMPIMAGADLAAFLDLTRSLPAFLHVARRFSSHLWHLLRYGRAMHLVNGVA LVARLAKSAEALGVRLIESAPARELLLRDGKVVGALVESAEGLLRIEAGAVVLACGGF PHDPQRRAELAPTLDTLLPLPPPGCNGDGLRLGESAGGRVADDLRSPIAWAPVSRVPH GDGETGHFPHIIERGKPGLIGVLANGRRFVNEAHGYHDYVAALLEATPPGQPARSWLV CDRRFLRRYGLGYVRPAPLPIAAHLRSGYLKRGTSLDQLARSCGIDPSGLAATVAEYN RHAREGRDPEFGRGGTAFNRKQGDPAYPGPNPCVAPIERGPYYAVQVEPGCFGTFAGL KTDAQARVLDGGGQPIPGLYAAGADMASLFAGHYPSGGINLGPALTFGYIAGRHIAGA LGYEQEQAQRG" misc_feature 2469286..2471016 /gene="pslM" /locus_tag="PA2243" /note="putative FAD-binding dehydrogenase; Reviewed; Region: PRK06134" /db_xref="CDD:180419" gene 2471075..2472076 /gene="pslN" /locus_tag="PA2244" /db_xref="GeneID:880773" CDS 2471075..2472076 /gene="pslN" /locus_tag="PA2244" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250934.1" /db_xref="GeneID:880773" /translation="MSAAPPDIPALPAGLCYVDDRQPGIRRRRQGKRFVYFDADGQRI GDAEEIRRLDKLAIPPAYREVWICPDPNGHLQATGRDARGRKQYRYHPRWREVRDADK YERLLRFGQALPRLRRHIDAQLRLPGLGRDKVVALAVALLDATLIRVGNHRYARDNRS YGLTTLRTRHVDVNGSRIRFRFKGKSGIEHDVSLEHPRLARVLRRCLELPGQDLLQYL DEDGQPHRIGSHDINEYLRRHTGEDFSAKDYRTWAGSALALERLRRAEADGLGAVVAE VAAELGNSVAICRQCYIHPAIIEAYQAGQLGQLRRARKRRWLSAEEATLLAFLDTPG" misc_feature 2471090..2472061 /gene="pslN" /locus_tag="PA2244" /note="DNA topoisomerase IB [Replication, recombination and repair]; Region: Top1; COG3569" /db_xref="CDD:442790" protein_bind complement(2471925..2471937) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2245" /bound_moiety="AmrZ" gene complement(2472442..2472903) /gene="bkdR" /locus_tag="PA2246" /db_xref="GeneID:879548" CDS complement(2472442..2472903) /gene="bkdR" /locus_tag="PA2246" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="Bkd operon transcriptional regulator BkdR" /protein_id="NP_250936.1" /db_xref="GeneID:879548" /translation="MAELDRIDLKILRALADDGRLSWRDLAQKVGLSLTPTLRRVRRL EEEHYIQGYFARLDEERLSGAMSVFVSVSLEKQTGDYLARFEERIVDAPQVMSCFQMT GDADYMLRVVVKDLAAYQAFLTNTLTCIPGVAGIKSAFALKSVMLRSAPPL" misc_feature complement(2472478..2472900) /gene="bkdR" /locus_tag="PA2246" /note="DNA-binding transcriptional regulator, Lrp family [Transcription]; Region: Lrp; COG1522" /db_xref="CDD:441131" gene 2473213..2474445 /gene="bkdA1" /locus_tag="PA2247" /db_xref="GeneID:877901" CDS 2473213..2474445 /gene="bkdA1" /locus_tag="PA2247" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-oxoisovalerate dehydrogenase subunit alpha" /protein_id="NP_250937.1" /db_xref="GeneID:877901" /translation="MSDYEPLRLHVPEPTGRPGCKTDFSYLHLSPAGEVRKPPVDVEP AETSDLAYSLVRVLDDDGHAVGPWNPQLSNEQLLRGMRAMLKTRLFDARMLTAQRQKK LSFYMQCLGEEAIATAHTLALRDGDMCFPTYRQQGILITREYPLVDMICQLLSNEADP LKGRQLPIMYSSKEAGFFSISGNLATQFIQAVGWGMASAIKGDTRIASAWIGDGATAE SDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGTTFANRGVGCGIASLRVDG NDFLAVYAASEWAAERARRNLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWTNFPLGD PIARLKRHMIGLGIWSEEQHEATHKALEAEVLAAQKQAESHGTLIDGRVPSAASMFED VYAELPEHLRRQRQELGV" misc_feature 2473225..2473347 /gene="bkdA1" /locus_tag="PA2247" /note="2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal; Region: OxoDH_E1alpha_N; pfam12573" /db_xref="CDD:432647" misc_feature 2473372..2474439 /gene="bkdA1" /locus_tag="PA2247" /note="TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha [Energy production and conversion]; Region: AcoA; COG1071" /db_xref="CDD:440689" gene 2474442..2475494 /gene="bkdA2" /locus_tag="PA2248" /db_xref="GeneID:879226" CDS 2474442..2475494 /gene="bkdA2" /locus_tag="PA2248" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-oxoisovalerate dehydrogenase subunit beta" /protein_id="NP_250938.1" /db_xref="GeneID:879226" /translation="MNAMNPQHENAQTVTSMTMIQALRSAMDIMLERDDDVVVFGQDV GYFGGVFRCTEGLQKKYGTSRVFDAPISESGIIGAAVGMGAYGLRPVVEIQFADYVYP ASDQLISEAARLRYRSAGDFIVPMTVRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVM PSNPYDAKGLLIACIENDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPASQVPDGYY KVPLDKAAIVRPGAALTVLTYGTMVYVAQAAADETGLDAEIIDLRSLWPLDLETIVAS VKKTGRCVIAHEATRTCGFGAELMSLVQEHCFHHLEAPIERVTGWDTPYPHAQEWAYF PGPARVGAAFKRVMEV" misc_feature 2474490..2475488 /gene="bkdA2" /locus_tag="PA2248" /note="Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component, beta subunit [Energy production and conversion]; Region: AcoB; COG0022" /db_xref="CDD:439793" protein_bind 2475022..2475034 /gene="bkdA2" /locus_tag="PA2248" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2249" /bound_moiety="AmrZ" gene 2475495..2476781 /gene="bkdB" /locus_tag="PA2249" /db_xref="GeneID:880679" CDS 2475495..2476781 /gene="bkdB" /locus_tag="PA2249" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="branched-chain alpha-keto acid dehydrogenase complex lipoamide acyltransferase" /protein_id="NP_250939.1" /db_xref="GeneID:880679" /translation="MGTHVIKMPDIGEGIAEVELVEWHVQVGDSVNEDQVLAEVMTDK ATVEIPSPVAGRILALGGQPGQVMAVGGELIRLEVEGAGNLAESPAAATPAAPVAATP EKPKEAPVAAPKAAAEAPRALRDSEAPRQRRQPGERPLASPAVRQRARDLGIELQFVQ GSGPAGRVLHEDLDAYLTQDGSVARSGGAAQGYAERHDEQAVPVIGLRRKIAQKMQDA KRRIPHFSYVEEIDVTDLEALRAHLNQKWGGQRGKLTLLPFLVRAMVVALRDFPQLNA RYDDEAEVVTRYGAVHVGIATQSDNGLMVPVLRHAESRDLWGNASEVARLAEAARSGK AQRQELSGSTITLSSLGVLGGIVSTPVINHPEVAIVGVNRIVERPMVVGGNIVVRKMM NLSSSFDHRVVDGMDAAAFIQAVRGLLEHPATLFLE" misc_feature 2475498..2476778 /gene="bkdB" /locus_tag="PA2249" /note="branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed; Region: PRK11856" /db_xref="CDD:237001" gene 2476785..2478179 /gene="lpdV" /locus_tag="PA2250" /db_xref="GeneID:878470" CDS 2476785..2478179 /gene="lpdV" /locus_tag="PA2250" /EC_number="1.8.1.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="branched-chain alpha-keto acid dehydrogenase complex dihydrolipoyl dehydrogenase" /protein_id="NP_250940.1" /db_xref="GeneID:878470" /translation="MSQILKTSLLIVGGGPGGYVAAIRAGQLGIPTVLVEGAALGGTC LNVGCIPSKALIHAAEEYLKARHYASRSALGIQVQAPSIDIARTVEWKDAIVDRLTSG VAALLKKHGVDVVQGWARILDGKSVAVELAGGGSQRIECEHLLLAAGSQSVELPILPL GGKVISSTEALAPGSLPKRLVVVGGGYIGLELGTAYRKLGVEVAVVEAQPRILPGYDE ELTKPVAQALRRLGVELYLGHSLLGPSENGVRVRDGAGEEREIAADQVLVAVGRKPRS EGWNLESLGLDMNGRAVKVDDQCRTSMRNVWAIGDLAGEPMLAHRAMAQGEMVAELIA GKRRQFAPVAIPAVCFTDPEVVVAGLSPEQAKDAGLDCLVASFPFAANGRAMTLEANE GFVRVVARRDNHLVVGWQAVGKAVSELSTAFAQSLEMGARLEDIAGTIHAHPTLGEAV QEAALRALGHALHI" misc_feature 2476809..2478176 /gene="lpdV" /locus_tag="PA2250" /note="dihydrolipoamide dehydrogenase; Reviewed; Region: PRK06416" /db_xref="CDD:235798" gene complement(2478312..2479130) /locus_tag="PA2251" /db_xref="GeneID:879729" CDS complement(2478312..2479130) /locus_tag="PA2251" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250941.1" /db_xref="GeneID:879729" /translation="MSEHLGANLKLLCSHYRSISEVCRQLAINRAQFNKYLSGQSQPT PYNRKRIGDFFGVEDYELGLPPEQFARLIGARTSAQPRQPSNDPLLRLLQPLRAEAGD LGRYCGYYFEYANCMSVPGSILLSLVHLYEEDGVFLFERQERQERTSSTDVQAEEWAR CRYLGAAFQLQDRVFLIDYESLTLNEMSQTILIPSFKSRITRLNGLKMGVSSGDRRTP ACSRVVWDYLGAEINRINAYRQVRLYRPDDPRIDEDIRQRLAAGSLRHGLLETE" gene 2479299..2480744 /locus_tag="PA2252" /db_xref="GeneID:878283" CDS 2479299..2480744 /locus_tag="PA2252" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="AGCS sodium/alanine/glycine symporter" /protein_id="NP_250942.1" /db_xref="GeneID:878283" /translation="MLEMLNDFLSGKVLIVLIVGLGAYFTIRSRFVQFRHFGHMFGVF RESLRGQAGQLSSFQALMLSLAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMSS SFFECTLAQVYKRSDGDGLYRGGPSYYIQHGLKLRSMAVVFAVLLLVTYGFAFNGLQS YTVTHSLQNAFGFAPQHTGIALAVLLGVVFIGGIKRIAAVSDLLVPIKTLAYIGVTLY VIASQIEHVPAMLETIVKSAFGLDPAFGGLLGSAIVMGVKRGVFANEAGLGSAPNVAA VAAVRHPAAQGVVQAFSVFLDTFVICTCTALLILLSGFYTPGFEGDGIVLTQNSLAAV VGDWGRVFVSVALSLFVFTCILYNFYLGENSLQFLSRNRLVLIGYRALVLALVVWGSV QDLSTVFAFADITMTCLAFVNLMALALLFKVGLRVMRDYDVQRRAGIKQPVFDSAQFA DLDLDREAWPAGQRAEPPAQADAEPLPSGNR" misc_feature 2479299..2480612 /locus_tag="PA2252" /note="Na+/alanine symporter [Amino acid transport and metabolism]; Region: AlsT; COG1115" /db_xref="CDD:440732" gene 2480844..2481830 /gene="ansA" /locus_tag="PA2253" /db_xref="GeneID:878133" CDS 2480844..2481830 /gene="ansA" /locus_tag="PA2253" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="L-asparaginase I" /protein_id="NP_250943.1" /db_xref="GeneID:878133" /translation="MLPVKNLFVLYTGGTIGMLQTPQGLAPAGGFEARMRDHLQSLGD APDLRWRFAELQPPLDSANMTQGNWLAMRDAIVAALDAGHDGVLLLHGTDTLAYSAAA LSFLLLDLPIPVLLTGSMLPAGAPGSDAWDNLVGALRVLQEGHARGVQVYFNDALLHG ARVSKLRSDAFDAFAELPRPRHAEHAPVPAALGYRQPRREVNLAVLPLYPGLRAAHLR GLLDSGVEALLLECYGSGTGPSDDEELLALLREAHARGVLLAAVSQCAYGQVEFGVYA AGSRLRDAGLLSAGGMTREAALGKLFGLLGAGLGRDEAQRWFALDLCGENAD" misc_feature 2480856..2481734 /gene="ansA" /locus_tag="PA2253" /note="Type I (cytosolic) bacterial L-asparaginase; Region: L-asparaginase_I; cd08963" /db_xref="CDD:199207" misc_feature order(2480883..2480888,2481024..2481029,2481117..2481125, 2481198..2481200,2481336..2481338) /gene="ansA" /locus_tag="PA2253" /note="active site" /db_xref="CDD:199207" misc_feature order(2480886..2480888,2480913..2480921,2481012..2481014, 2481021..2481041,2481045..2481050,2481123..2481128, 2481135..2481137,2481201..2481206,2481336..2481353, 2481447..2481479,2481483..2481488,2481495..2481497, 2481504..2481509,2481534..2481536,2481540..2481548, 2481558..2481560,2481633..2481635,2481642..2481656, 2481666..2481668,2481723..2481725) /gene="ansA" /locus_tag="PA2253" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:199207" gene 2482045..2483031 /gene="pvcA" /locus_tag="PA2254" /db_xref="GeneID:878099" CDS 2482045..2483031 /gene="pvcA" /locus_tag="PA2254" /experiment="DESCRIPTION:Gene expression[PMID:18689486]" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="paerucumarin biosynthesis protein PvcA" /protein_id="NP_250944.1" /db_xref="GeneID:878099" /translation="MYAIAEDTLPARVLKELLLYRRRYPEHRQSASEADEIRRIEQVQ LPRIAAFIEAGEPIEFVLPAFPAKSPNPGKVLDSRPDMAERLSLSFLNHLCQRIQLFY APGAKITVCSDGRVFGDLVRIGDAHISAYQDALRLMIEEIGATHIGVFNLEDVRAFEA QRDNHEQLRQLLIGGYAEPLESIRETLLASEEGLLLYRAITRFLYEDGLTPDYQGSKT ALQRDAKERAYGVIQRSWAWGALLADQFPRAIRLSIHPQPADSLKFGIHMMPTRDDWL TPWHGVAVNTEDRFVLMKRSEVLELGGELVQINGQPSHYRLPARAARRAAVA" misc_feature 2482045..2482995 /gene="pvcA" /locus_tag="PA2254" /note="Pyoverdine/dityrosine biosynthesis protein Dit1 [Secondary metabolites biosynthesis, transport and catabolism]; Region: Dit1; COG3207" /db_xref="CDD:442440" gene 2483049..2483924 /gene="pvcB" /locus_tag="PA2255" /db_xref="GeneID:878457" CDS 2483049..2483924 /gene="pvcB" /locus_tag="PA2255" /experiment="DESCRIPTION:Gene expression[PMID:18689486]" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="paerucumarin biosynthesis protein PvcB" /protein_id="NP_250945.1" /db_xref="GeneID:878457" /translation="MNAYLSDQPVRLSPLRDEQGNQPRFGLLLEPGRPGMHVGELPAQ WLKGLARSHHLLLLRGFAAFADAESLTRYCHDFGEVMLWPFGAVLELVEQEGAEDHIF ANNYVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLADSSELELWR RASGRYQRSAAHYSSRSAAPIVERHPRREFPILRFCEPPVEGDASFINPSEFHYDGIA PEQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRVH IHAEPALRNPHLQRD" misc_feature 2483088..2483888 /gene="pvcB" /locus_tag="PA2255" /note="Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases...; Region: CAS_like; cd00250" /db_xref="CDD:238154" misc_feature order(2483283..2483288,2483385..2483387,2483391..2483393, 2483406..2483408,2483553..2483555,2483868..2483870, 2483874..2483876) /gene="pvcB" /locus_tag="PA2255" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:238154" misc_feature order(2483376..2483378,2483382..2483384,2483463..2483465, 2483823..2483825,2483856..2483858) /gene="pvcB" /locus_tag="PA2255" /note="active site" /db_xref="CDD:238154" misc_feature order(2483376..2483378,2483382..2483384,2483823..2483825) /gene="pvcB" /locus_tag="PA2255" /note="iron coordination sites [ion binding]; other site" /db_xref="CDD:238154" gene 2483976..2485478 /gene="pvcC" /locus_tag="PA2256" /db_xref="GeneID:878263" CDS 2483976..2485478 /gene="pvcC" /locus_tag="PA2256" /experiment="DESCRIPTION:Gene expression[PMID:18689486]" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="paerucumarin biosynthesis protein PvcC" /protein_id="NP_250946.1" /db_xref="GeneID:878263" /translation="MSHSVPNALMTGADYLDSLRDGRQVYLNGERVADVTRHRAFRNA CRSIAGLYDGLHGEQRDVLTRVDAQGRRSHRFFTPAQNAEDLLGAREAIGCWSRMTYG FMGRTPDYKAAFMSGLEAGAGFYGDYRHNACAWHRAFADRGLFLNHAIINPPLDRSKA IHEMRDVFVHVERETDQGIVVSGAKMLATGSAITNATFVAPVASAQMEAGKAEDFAVV FFARMDNPGLRLMCRPSYEERASSPFDYPLSSRFDENDSVLLFDKALIPWEDVLVYRD LRRATGFYAESGFANLYNFQSGIRLGVKLELMIGLLSLGVRANGTQSFRGIQAALGEL IALQHLLQALTTAMARDPERNAAGSAVPRLEYANALRIQVPQIWKRVRELLESALGGA PLVTVSGAADLRDGEARRLVDSYYRGAELEPEQRLKLFKLIWDATGSEFGARHAVYES HYSGNAEQIRLDSLAWASRRGHLAYCEAMVQRCMADYDIHGWLRGPWQHD" misc_feature 2484000..2485436 /gene="pvcC" /locus_tag="PA2256" /note="Aromatic ring hydroxylase [Secondary metabolites biosynthesis, transport and catabolism]; Region: YoaI; COG2368" /db_xref="CDD:441935" gene 2485471..2486118 /gene="pvcD" /locus_tag="PA2257" /db_xref="GeneID:878068" CDS 2485471..2486118 /gene="pvcD" /locus_tag="PA2257" /experiment="DESCRIPTION:Gene expression[PMID:18689486]" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="paerucumarin biosynthesis protein PvcD" /protein_id="NP_250947.1" /db_xref="GeneID:878068" /translation="MTERKRWLAGCLSALLSLPLAAAVPGPDAPADLARGKAMAQKMC SRCHDDDGNGGPRPNRSYPKLAGLDREYLYKQIYDLKTQRRRNPATNGRGEELSAADV VNVSAWFAAQRMSAGEQTLADPRQRERGRQLFENGLAQRGVPPCVTCHGPAAQGLAAL KAPRLAGQWAEYLATQLHGFRDGKRGNSATMRAVAGGLEDSHIQALAGYLGSLGP" misc_feature 2485540..2485827 /gene="pvcD" /locus_tag="PA2257" /note="Cytochrome c553 [Energy production and conversion]; Region: CytC553; COG2863" /db_xref="CDD:442110" misc_feature 2485888..2486115 /gene="pvcD" /locus_tag="PA2257" /note="Cytochrome c553 [Energy production and conversion]; Region: CytC553; COG2863" /db_xref="CDD:442110" gene complement(2486355..2487293) /gene="ptxR" /locus_tag="PA2258" /db_xref="GeneID:878030" CDS complement(2486355..2487293) /gene="ptxR" /locus_tag="PA2258" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="HTH-type transcriptional regulator PtxR" /protein_id="NP_250948.1" /db_xref="GeneID:878030" /translation="MSAALERLNHLNLNHLYAFVAVAEHNSFTAAAEALGLSKSLLSE QLRRLEADLGIQLLTRTTRRMTLTDRGELLFGVAQRMLGELDGALSDVRDLQGEPSGR LRITAPQDFVKWHISSVSAAFIRQFPKVQVEMLADDQFSDLVGQRIDLAVRIGWPRDS GLHASKLCDFQQVAVATPGYLAGLPPVLQPHDLARCEWIGHTRLSTPWTWTFERQRER ATVQTRGRLLANNTLAVYRLVLDGAGVSVLPSFLVAREIARGRLVRLLPGWRLPQGGI YALYPSARYMPVRVRAFIESLREHLGREPFRLAQSE" misc_feature complement(<2487126..2487257) /gene="ptxR" /locus_tag="PA2258" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(2486403..2486993) /gene="ptxR" /locus_tag="PA2258" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature complement(order(2486466..2486468,2486547..2486549, 2486598..2486600,2486784..2486786,2486790..2486792, 2486832..2486834,2486949..2486951,2486961..2486963)) /gene="ptxR" /locus_tag="PA2258" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature complement(order(2486571..2486573,2486580..2486585, 2486604..2486618,2486703..2486705,2486886..2486906, 2486910..2486912,2486922..2486924,2486931..2486936, 2486940..2486945,2486955..2486960)) /gene="ptxR" /locus_tag="PA2258" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" protein_bind complement(2487483..2487503) /experiment="Beta-gal reporter assay [PMID: 18227247]" /experiment="DNAse footprinting [PMID: 18227247]" /experiment="EMSA [PMID: 18227247]" /note="Transcription factor binding site for NP_249343.; Evidence of regulation for: PA2258" /bound_moiety="Vfr" protein_bind 2487772..2487785 /experiment="Beta-gal reporter assay [PMID: 22844393]" /experiment="DNAse footprinting [PMID: 22844393]" /experiment="EMSA [PMID: 22844393]" /note="'Transcription factor binding site for NP_250949.; Evidence of regulation for: PA2261, PA2260, PA2263, PA2262, PA2259'" /bound_moiety="PtxS" gene 2487856..2488878 /gene="ptxS" /locus_tag="PA2259" /db_xref="GeneID:877811" CDS 2487856..2488878 /gene="ptxS" /locus_tag="PA2259" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator PtxS" /protein_id="NP_250949.1" /db_xref="GeneID:877811" /translation="MNGSVLPSRGRVTINQVAEAAGVSKASVSRYIGGDRQLLADATA RRIERAIDQLDYRPNQMARGLKRGRTRLIGMLVADILNPYSVAVMHGVETACREHGYS LVVCNTDRDDEQERHHLAALQSYNVEGLIVNTLGHHPGELRALHRELPMVLVDRQLAE LDTDLVGLDNADAVEQALDHLQHRGFRDILLVTEPLDGTSSRIERVQAFNASIGRRPA LKGQVLQTDDFFRDGLRAFLSASGPGPKALFTCNGVATLCATRQLRDLGCRLFDEVGL LALDELDWYPLVGSGITALAQPTDEIGRTAFERLLARLEGDREPARRVTFPAQLIVRG STHPRG" misc_feature 2487889..2488101 /gene="ptxS" /locus_tag="PA2259" /note="helix_turn _helix lactose operon repressor; Region: HTH_LACI; smart00354" /db_xref="CDD:197675" misc_feature order(2487922..2487936,2487940..2487945,2487952..2487954, 2487967..2487969,2487973..2487975,2487982..2487984, 2488021..2488023,2488030..2488032,2488039..2488044, 2488048..2488053) /gene="ptxS" /locus_tag="PA2259" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143331" misc_feature 2488021..2488050 /gene="ptxS" /locus_tag="PA2259" /note="domain linker motif [active]" /db_xref="CDD:143331" misc_feature 2488069..2488854 /gene="ptxS" /locus_tag="PA2259" /note="ligand-binding domain of DNA transcription repressor RegR and other putative regulators such as KdgR and EndR; Region: PBP1_RegR_EndR_KdgR-like; cd06283" /db_xref="CDD:380506" misc_feature order(2488069..2488071,2488090..2488092,2488111..2488116, 2488120..2488125,2488132..2488134,2488159..2488176, 2488207..2488209,2488216..2488218,2488228..2488230, 2488627..2488629,2488636..2488641,2488648..2488650) /gene="ptxS" /locus_tag="PA2259" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:380506" misc_feature order(2488105..2488110,2488117..2488119,2488252..2488254, 2488318..2488320,2488357..2488359,2488468..2488470, 2488531..2488533,2488693..2488695,2488744..2488746) /gene="ptxS" /locus_tag="PA2259" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:380506" protein_bind 2488879..2488888 /experiment="Beta-gal reporter assay [PMID: 22844393]" /experiment="DNAse footprinting [PMID: 22844393]" /experiment="EMSA [PMID: 22844393]" /experiment="Isothermal titration calorimetry [PMID: 22844393]" /note="'Transcription factor binding site for NP_250948.; Evidence of regulation for: PA2261, PA2260, PA2263, PA2262'" /bound_moiety="PtxR" gene 2488950..2489732 /locus_tag="PA2260" /db_xref="GeneID:877758" CDS 2488950..2489732 /locus_tag="PA2260" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250950.1" /db_xref="GeneID:877758" /translation="MSLHPVSISLSSYGADLVRSRGQASFLPLLAMAGAQRVELREEL FAGPPDTEALTAAIQLQGLECVFSSPLELWREDGQLNPELEPTLRRAEACGAGWLKVS LGLLPEQPDLAALGRRLARHGLQLLVENDQTPQGGRIEVLERFFRLAERQQLDLAMTF DIGNWRWQEQAADEAALRLGRYVGYVHCKAVIRNRDGKLVAVPPSAADLQYWQRLLQH FPEGVARAIEYPLQGDDLLSLSRRHIAALARLGQPQEERQHG" misc_feature 2488971..>2489516 /locus_tag="PA2260" /note="Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism]; Region: YcjR; COG1082" /db_xref="CDD:440699" gene 2489725..2490675 /locus_tag="PA2261" /db_xref="GeneID:877834" CDS 2489725..2490675 /locus_tag="PA2261" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="2-ketogluconate kinase" /protein_id="NP_250951.1" /db_xref="GeneID:877834" /translation="MADFEILCFGETMAMFVAEQPGELDRVEQFGKRIAGADSNVAIG LARLGFAVAWLSRVGDDSLGRFVLDSLTREGLDCRFVEVDAQAPTGFQMKSREVDGAD PRVEYFRRGSAASRLGLAHIREEMLGARHLHATGIPPALSASACELSHELMRRMRGKG ASLSFDPNLRPSLWPSERRMIAEINALAAHAHWVLPGLEEGRLLSGWQEPADIAAFYL DMGVDAVAIKLGPSGAYYRDAHGEGLVPGVPVATVVDTVGAGDGFAVGVVSALLEGLP LPDAVARGNWIGSRAVQVRGDMEGLPKRSQLLDRERRRSA" misc_feature 2489737..2490618 /locus_tag="PA2261" /note="2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the...; Region: KdgK; cd01166" /db_xref="CDD:238571" misc_feature order(2489830..2489835,2489842..2489844,2489998..2490000, 2490043..2490045,2490049..2490051,2490133..2490135, 2490232..2490234,2490496..2490498,2490505..2490507, 2490613..2490615) /locus_tag="PA2261" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238571" misc_feature order(2490406..2490408,2490421..2490423,2490466..2490468, 2490496..2490504,2490511..2490513,2490577..2490579, 2490589..2490591) /locus_tag="PA2261" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:238571" gene 2490738..2492045 /locus_tag="PA2262" /db_xref="GeneID:877717" CDS 2490738..2492045 /locus_tag="PA2262" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="2-ketogluconate transporter" /protein_id="NP_250952.1" /db_xref="GeneID:877717" /translation="MTMPRLASSRWWYIMPIVFVTYSLAYLDRANYGFAAASGMADDL RITPGLSSLLGALFFLGYFFFQVPGAIYAEKRSVKKLIFVSLILWGGLATLTGMVANV YLLIGIRFLLGVVEAAVMPAMLVYLCHWFTRAERSRANTFLILGNPVTILWMSVVSGY LVEHFSWRWMFIIEGLPAVIWAFIWWRLVDDRPRQAAWLSGSEKRDLEDALAAEQQGI KPVKNYREAFRSPKVIVLSLQYFCWSIGVYGFVLWLPSILKHGANIDIIEAGWLSALP YLAAVIAMLGVSWASDRLQKRKRFVWPPLLIASIAFYGSYALGSEHFWLSYALLVLAG ACMYAPYGPFFAIVPEVLPANVAGGAMALINSMGALGSFSGSWLVGYLNGITGGPGAS YLFMSGALLLSVLLTVFLNPHADKREPDAARAHASRRAAPAHP" misc_feature 2490768..2491967 /locus_tag="PA2262" /note="Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; Region: MFS_ExuT_GudP_like; cd17319" /db_xref="CDD:340877" misc_feature order(2490810..2490815,2490822..2490827,2490834..2490836, 2490933..2490935,2491083..2491088,2491092..2491100, 2491107..2491109,2491167..2491169,2491176..2491181, 2491188..2491190,2491455..2491457,2491464..2491469, 2491476..2491484,2491491..2491493,2491575..2491577, 2491587..2491589,2491743..2491748,2491758..2491760, 2491770..2491772,2491818..2491820,2491827..2491832, 2491839..2491844,2491851..2491853) /locus_tag="PA2262" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340877" gene 2492064..2493050 /locus_tag="PA2263" /db_xref="GeneID:877698" CDS 2492064..2493050 /locus_tag="PA2263" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="2-hydroxyacid dehydrogenase" /protein_id="NP_250953.1" /db_xref="GeneID:877698" /translation="MKKVVLYKRLSAPLMERLRERVEVLLVEEPGRDGLARLRDALPE AHGLLGASLRLDAGLLDLAPRLEAIASVSVGVDNYDIDYLDRRGILLSNTPDVLTETT ADTGFALILATARRVVELAGWVRAGEWKKSVGAAQFGTDVHGKTLGIVGMGRIGEALA RRGHHGFGMRVLYHSHSPKPHVEERYAASYRPLDALLEESDFVCLTLPLTAATEGLIG AAQFARMRPQAIFINISRGRVVDEAALIEALAQRRIRAAGLDVFEREPLSPDSPLLRL PNVVATPHIGSATEETREAMARCAVDNLLAALAGARPLNLVNPSAWARRRGA" misc_feature 2492067..2492993 /locus_tag="PA2263" /note="D-glycerate dehydrogenase/hydroxypyruvate reductase (GDH); Region: GDH; cd05301" /db_xref="CDD:240626" misc_feature order(2492085..2492090,2492094..2492096,2492214..2492219, 2492277..2492279,2492361..2492366,2492373..2492378, 2492382..2492387,2492394..2492396,2492406..2492408, 2492412..2492414,2492436..2492438,2492442..2492444, 2492448..2492450,2492457..2492477,2492478..2492492, 2492544..2492549,2492559..2492564,2492856..2492861, 2492883..2492885,2492901..2492921,2492925..2492936, 2492940..2492942) /locus_tag="PA2263" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:240626" misc_feature order(2492214..2492216,2492280..2492288,2492355..2492357, 2492769..2492771,2492913..2492915,2492922..2492924) /locus_tag="PA2263" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:240626" misc_feature order(2492283..2492288,2492367..2492369,2492514..2492528, 2492583..2492591,2492598..2492600,2492679..2492687, 2492697..2492702,2492763..2492771,2492841..2492846, 2492913..2492915,2492919..2492924) /locus_tag="PA2263" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:240626" protein_bind 2493072..2493081 /experiment="DNAse footprinting [PMID: 22844393]" /experiment="EMSA [PMID: 22844393]" /experiment="Isothermal titration calorimetry [PMID: 22844393]" /note="'Transcription factor binding site for NP_250948.; Evidence of regulation for: PA2265, PA2264, PA2266'" /bound_moiety="PtxR" protein_bind 2493123..2493136 /experiment="DNAse footprinting [PMID: 22844393]" /experiment="EMSA [PMID: 22844393]" /note="'Transcription factor binding site for NP_250949.; Evidence of regulation for: PA2265, PA2264, PA2266'" /bound_moiety="PtxS" gene 2493218..2493934 /locus_tag="PA2264" /db_xref="GeneID:877991" CDS 2493218..2493934 /locus_tag="PA2264" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250954.1" /db_xref="GeneID:877991" /translation="MPDDKAVNGRRDFLRKTLTVIPAVTLAGYGVGHAMQTPAAEQDK PRERYQPRFFTNTEWAFVNAAVARLIPSDDNGPGAIEAGVPEFIDRQMETPYGHGALW YMQGPFVTDAAPEFGHQLKLVPRDIYRVGIAALERWSKANQGKPFAELEPSAQDDILQ RLEAGQIDLQDLPAKLLFGQLLQNTHEGFFSDPQHGGNRGLVGWKLVGFPGARADFMD WADRGEKYPFPPVAISGERG" misc_feature 2493389..2493850 /locus_tag="PA2264" /note="Gluconate 2-dehydrogenase subunit 3; Region: Gluconate_2-dh3; pfam13618" /db_xref="CDD:433352" gene 2493937..2495712 /locus_tag="PA2265" /db_xref="GeneID:879537" CDS 2493937..2495712 /locus_tag="PA2265" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="gluconate dehydrogenase" /protein_id="NP_250955.1" /db_xref="GeneID:879537" /translation="MATTLKPVDAVVVGFGWTGAILAKELTEAGLNVVALERGENRDT YPDGAYPNTLDELTYNTRGKLFQNLSKSTVSIRHGINDTALPYRQLSAFLPGDGVGGA GLHWSGVHFRIMPEELRLRSHYEERYGKKFIPEGMTIQDYGVSYEELEPHFDFAEKVF GTSGTAHTVKGQVVGKGNPFAADRSDDFPLPALRQVYSAQLFRKAAEELGLHPYDLPA ANASGPWTNPYGVQMGPCNFCGFCSGYACYMYSKASPNLNILPALRQTPLFELRANCN VLKVNLDSDGRQATGVTYVDAQGREIVQPAKLVIISAFQFHNVRLLLLSGIGKPYDPR TGEGVVGKNFAYQNMATIKAFFDKDVHTNPFVGTGGGGVAVDDFNADNFDHGPLGFVG GSPMWVNQAGSKPIGGLAVPPGTPSWGSGWKQAVKDAYTHTVSMDAHGSNMTYRDNYL DLDPTYKDAYGQPLLRMTFDWKDNEIRMSRYVTEHMRKIAEAMNPKAISVSVKNFGDH FNTRVYQTTHLLGGAIMGSDPKTSVLNRYLQSWDVHNVFVMGASAFPQGTGYNPTGLV AALAYWSAKAIREQYLKNPGPLVQA" misc_feature 2493946..2495688 /locus_tag="PA2265" /note="Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Region: BetA; COG2303" /db_xref="CDD:441878" gene 2495724..2497043 /locus_tag="PA2266" /db_xref="GeneID:879571" CDS 2495724..2497043 /locus_tag="PA2266" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cytochrome C" /protein_id="NP_250956.1" /db_xref="GeneID:879571" /translation="MKPTAFLALSALACGIAQAAAAPDPALVRQGEYLARAGDCVACH TARDGKPFAGGLPMETPIGAVYSTNITPDRKTGIGDYSFEDFDRAVRHGVARSGDTLY PAMPYPSYARVSEADMRALYAYFMHGVEPVEQPNKASDIPWPLSMRWPLAFWRWTFAP EVKDFQAAAGQDPVLARGAYLVEGLGHCGACHTPRGLGMQEKALAASDGAAYLSGSAP LENWIAKSLRGDHRTGLGSWSEADLVSFLRTGRSERSAVFGGMSDVVVHSMQYMTDAD LTAIARYLKSLPPADPADQPHVYDESVAQALFHGDDSKTGAALYVDNCGACHRTDGKG YARVFPALAGNPVVTGSDPTSLVHIVLKGGTLPATHQAPSSFTMPPFGWRMNDQEIAD VVNFIRTSWGNQAPSVSVDEVRRLRKDTGAAAVGDIPPPGSAAADRG" misc_feature 2495832..2496104 /locus_tag="PA2266" /note="Cytochrome c; Region: Cytochrom_C; pfam00034" /db_xref="CDD:459641" misc_feature 2496015..2496590 /locus_tag="PA2266" /note="Cytochrome c, mono- and diheme variants [Energy production and conversion]; Region: CccA; COG2010" /db_xref="CDD:441613" misc_feature 2496387..2496932 /locus_tag="PA2266" /note="Cytochrome c, mono- and diheme variants [Energy production and conversion]; Region: CccA; COG2010" /db_xref="CDD:441613" gene complement(2497116..2498012) /locus_tag="PA2267" /db_xref="GeneID:877649" CDS complement(2497116..2498012) /locus_tag="PA2267" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250957.1" /db_xref="GeneID:877649" /translation="MQKMNAPLQYRLDHADLALVLALVRGGSLARAAELLRVDVSTVF RAIRRLEKNLGKALFDKSRSGYLANQTARRLAQQAELAEQALEAARIGLELEREVLSG TVRMTCSDAVLHGLLLPALARFMPGYPALQLELATSNDFANLSRRDADIALRMTRTPP EHLVGRNLGEVRYVLCASERYLEGRDATEPAMLHWIAPDDFLPDHPSVVWRRRHYPGV LPAYRCNGVLAVAEMARAGLGLAAIPAYLLRDGDGLRVLDADLEGCASALWLLTRPDC RALRSVVVLFDELGRHVRLGDE" misc_feature complement(2497131..2497979) /locus_tag="PA2267" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 2498099..2499169 /locus_tag="PA2268" /db_xref="GeneID:878537" CDS 2498099..2499169 /locus_tag="PA2268" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250958.1" /db_xref="GeneID:878537" /translation="MSTPPAAPLRIALVGDHDPHITAHRAIPLALRLAGEALGLEIAF DWLASDRLPAEPALERYDGFWCVPGSPYRDADAVLRLIAHARGRRRPFLGTCAGFQHT ILEFARNALGWQAATHGEEHPHSDQAVIAALPCALLEAREDVRLLRGSRLALAYAADW IEADYHCRYAIAPRFAAELTGGALRASAWSADGAIRAVELEQHPFFVATLFQPERAAL AGVLPPLPKAFVEACRTQRRDHPRRGPTPYYAVIFSSHRSAVDDGYAEAAERMLELAS RQPGYLGVESVRGANGFGITVSYWDSEAAIRAWSRHAEHRDAQARGRHDWYAGFSARI ARVEREYAFPAQPDTAQSPASS" misc_feature 2498120..2498806 /locus_tag="PA2268" /note="hypothetical protein; Validated; Region: PRK06186" /db_xref="CDD:180452" misc_feature 2498840..2499070 /locus_tag="PA2268" /note="Heme-degrading monooxygenase HmoA and related ABM domain proteins [Coenzyme transport and metabolism]; Region: HmoA; COG2329" /db_xref="CDD:441901" gene complement(2499133..2500338) /locus_tag="PA2269" /db_xref="GeneID:879733" CDS complement(2499133..2500338) /locus_tag="PA2269" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250959.1" /db_xref="GeneID:879733" /translation="MSNPYLELFAAPGAKGFSAAGLLARMPLSMTGLGIVTMLSQVHA DYWLAGTVAATFVFCNALLAPQVSRLVDRFGQGRVLLPAALASALSMSALLLCTHYRA PNAWLYLFALLAGAMPSMPAMVRARWTELYRGSPKLHTAFSFESVMDEVCYIIGPVLA VSLSVGWFAEAGPLLATLFLVAGVSLFSLQRGTEPPLHAHPRRRAGSALAYPAVRVLA LVLAAIGVIFGAVEVVSVAFAEAHGNKAAASLVLSVYAVGSCLAGLLFGLLRWRLVLS RQLLCMVTLMALSLMPLLGVESILALALTVLVAGFSVAPTMILAMGLVERAVDPARLT EGLTWAITGLGIGMALGSALAGWVVEGYGAASGFLVAVGAGWLAWLLALACFRVLAQD EAGDCAVSG" misc_feature complement(2499190..2500290) /locus_tag="PA2269" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" misc_feature complement(order(2499295..2499297,2499304..2499309, 2499316..2499321,2499328..2499330,2499376..2499378, 2499388..2499390,2499400..2499405,2499562..2499564, 2499574..2499576,2499640..2499642,2499649..2499657, 2499664..2499669,2499676..2499678,2499880..2499882, 2499889..2499894,2499901..2499903,2499961..2499963, 2499970..2499978,2499982..2499987,2500147..2500149, 2500243..2500245,2500252..2500257,2500264..2500269)) /locus_tag="PA2269" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:349949" gene 2500485..2501075 /locus_tag="PA2270" /db_xref="GeneID:879758" CDS 2500485..2501075 /locus_tag="PA2270" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250960.1" /db_xref="GeneID:879758" /translation="MARKPRAEMIEETRAKLIDAARRAFADNGYAGASMDELTASAGL TRGALYHHFGDKKGLLAAVVQQIDDEMNLRLGAILAAGEDLWSGFRAYNRAYLEMALE AEIQRIVLRDAPAILGSPSSEASQLRCLSSMTGQLRELMDSGRVRRTDAEALAWLLNG ALVDAALRIANAEHPPESLARACQALDVLLDGLLME" misc_feature 2500503..2500970 /locus_tag="PA2270" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene 2501083..2501598 /locus_tag="PA2271" /db_xref="GeneID:879779" CDS 2501083..2501598 /locus_tag="PA2271" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_250961.1" /db_xref="GeneID:879779" /translation="MDYRIRTSRDEDAALLPAIERSAGESFRLLPELAWIADAGVAGV DFHRRLIERGSHWLAEDADGQPVGFLAAERCADELHIAELSIAQAHQQQGLGRRLLER AVTYAHASHCRALTLTTFCDVPWNAPFYARLGFQRLTWQEAGERLRAILGHEQEIGFA ADSRCAMRLVL" misc_feature 2501089..2501496 /locus_tag="PA2271" /note="N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2) [Transcription, General function prediction only]; Region: PhnO; COG0454" /db_xref="CDD:440222" gene 2501720..2503417 /gene="pbpC" /locus_tag="PA2272" /db_xref="GeneID:882173" CDS 2501720..2503417 /gene="pbpC" /locus_tag="PA2272" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 3A" /protein_id="NP_250962.1" /db_xref="GeneID:882173" /translation="MSSQRRNYRFILVVTLFVLASLAVSGRLVYLQVHDHEFLADQGD LRSIRDLPIPVTRGMITDRNGEPLAVSTEVASIWCNPREMAAHLDEVPRLAGALHRPA AALLAQLQANPNKRFLYLERGLSPIEASEVMALGITGVHQIKEYKRFYPSSELTAQLI GLVNIDGRGQEGTELGFNDWLSGKDGVREVAINPRGSLVNSIKVLKTPKASQDVALSI DLRLQFIAYKALEKAVLKFGAHSGSAVLVNPKSGQILAMANFPSYNPNNRASFAPAFM RNRTLTDTFEPGSVIKPFSMSAALASGKFDENSQVSVAPGWMTIDGHTIHDVARRDVL TMTGVLINSSNIGMSKVALQIGPKPILEQLGRVGFGAPLSLGFPGENPGYLPFHEKWS NIATASMSFGYSLAVNTAELAQAYSVFANDGKLVPLSLLRDNPQNQVRQAMDPQIARR IRAMLQTVVEDPKGVVRARVPGYHVAGKSGTARKASGRGYADKSYRSLFVGMAPASDP QLVLAVMIDSPTRIGYFGGLVSAPTFSDIMAGSLRALAIPPDNLQDSPAVADRQHHG" misc_feature 2501720..2503363 /gene="pbpC" /locus_tag="PA2272" /note="Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis]; Region: FtsI; COG0768" /db_xref="CDD:440531" gene complement(2503425..2503895) /gene="soxR" /locus_tag="PA2273" /db_xref="GeneID:882298" CDS complement(2503425..2503895) /gene="soxR" /locus_tag="PA2273" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="redox-sensitive transcriptional activator SoxR" /protein_id="NP_250963.1" /db_xref="GeneID:882298" /translation="MKNSCASRELSVGELARRAGVAVSALHFYETKGLISSQRNAGNQ RRFSRETLRRVVVIKVAQRVGIPLAEIARALQTLPAGRSPSAADWARLSAQWKEDLTE RIDKLLLLRDQLDGCIGCGCLSLQACPLRNPGDQLSAEGPGAHWLDAEGREHDG" misc_feature complement(2503446..2503871) /gene="soxR" /locus_tag="PA2273" /note="redox-sensitive transcriptional activator SoxR; Region: SoxR; TIGR01950" /db_xref="CDD:131005" gene 2503973..2504350 /locus_tag="PA2274" /db_xref="GeneID:882293" CDS 2503973..2504350 /locus_tag="PA2274" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250964.1" /db_xref="GeneID:882293" /translation="MLIPSSYCCTDDQCPAASERSPCYAQLIDIEVEPASQLSLALEQ NAHLQRLERCFRNCPGYLSASLHPSEDGQHVLNYTCWRSREDCERAWLAREDAQGPLS AGVWRLGAKSVRFETFLVDAEGC" misc_feature 2504108..2504326 /locus_tag="PA2274" /note="Heme-degrading monooxygenase HmoA and related ABM domain proteins [Coenzyme transport and metabolism]; Region: HmoA; cl46813" /db_xref="CDD:481153" gene complement(2504375..2505436) /locus_tag="PA2275" /db_xref="GeneID:879532" CDS complement(2504375..2505436) /locus_tag="PA2275" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase" /protein_id="NP_250965.1" /db_xref="GeneID:879532" /translation="MTLQIRGYAAQSASTPLTAHRFERRAPRADDLVIDILYCGVCHS DLHQARNEWHNSLYPLVPGHEIIGRVASVGEAVSGFAVGELVGVGCMVDSCRHCAACS EGLEQYCAEYPTLTYNGRDRHDGLPTFGGYSERIVVSARFVLRIPQGLDPKAAAPLLC AGITSYSPLRHWKVGPGSRVAVVGLGGLGHMGLKFARALGAEVALFTRSPGKEEEARR LGADQVILSTDPQRMAAVAGRFDLILDTVPHQHDLNPYLATLKRDGTLVLVGLLEPLE PAVHGAQLVMGRRSIAGSAIGGIAETQEMLDFCAAHGIACDIEMIEIQQINQAYERML ASDVKYRFVIDMASLQKSF" misc_feature complement(2504402..2505421) /locus_tag="PA2275" /note="Cinnamyl alcohol dehydrogenases (CAD); Region: CAD1; cd05283" /db_xref="CDD:176186" misc_feature complement(order(2504549..2504551,2504957..2504959, 2505167..2505169,2505245..2505247,2505305..2505307, 2505311..2505313)) /locus_tag="PA2275" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:176186" misc_feature complement(order(2504957..2504959,2505245..2505247, 2505311..2505313)) /locus_tag="PA2275" /note="catalytic Zn binding site [ion binding]; other site" /db_xref="CDD:176186" misc_feature complement(order(2505110..2505112,2505134..2505136, 2505143..2505145,2505152..2505154)) /locus_tag="PA2275" /note="structural Zn binding site [ion binding]; other site" /db_xref="CDD:176186" misc_feature complement(order(2504552..2504575,2504582..2504587, 2504591..2504593,2504615..2504617,2504627..2504635, 2504648..2504650,2504924..2504926,2504936..2504938, 2505113..2505115)) /locus_tag="PA2275" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:176186" gene 2505645..2506535 /locus_tag="PA2276" /db_xref="GeneID:877653" CDS 2505645..2506535 /locus_tag="PA2276" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250966.1" /db_xref="GeneID:877653" /translation="MSTTSTDMASLIATLQDEPGFDATRIPGVRLMRAEQAYPRSPVF YEPRICILAQGQKIGFLGGETYRYDAERYLVMSVPLPFECETHASAAEPLLGVSVDVD IGTLKELLLQMEEAPGSDDDNELAPSAPMASVPLDAGMADAVMRLLGCLQSPLDSHIL GPQLVREIIFRALRSEQGNALRAVAGRHSGYGRMARALRRIHTDYASALDIDTLAREA NMSVSTFHHNFKAMTFTSPLQYLKSVRLYKAWSLMVQDGLNASTAANQVGYESPSQFS REFKRYFGRTPSEEVQAARR" misc_feature 2505717..2506178 /locus_tag="PA2276" /note="AraC-type transcriptional regulator N-terminus; Region: AraC_N; pfam06719" /db_xref="CDD:461994" misc_feature 2506269..2506511 /locus_tag="PA2276" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene 2506614..2506964 /gene="arsR" /locus_tag="PA2277" /db_xref="GeneID:878629" CDS 2506614..2506964 /gene="arsR" /locus_tag="PA2277" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="ArsR family transcriptional regulator" /protein_id="NP_250967.1" /db_xref="GeneID:878629" /translation="MPSPAEVFKCLADETRVRATLLIVDQGELCVCELMCALADSQPK ISRHLAQLRSAGLLLDRRQGQWVYYRLNPALPAWIHEVLQVTLRANGDWLQADAARLR DMDGRPQRASACCQ" misc_feature 2506614..2506916 /gene="arsR" /locus_tag="PA2277" /note="helix_turn_helix, cAMP Regulatory protein C-terminus; DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family; Region: HTH_CRP; cl46859" /db_xref="CDD:481199" gene 2506978..2508261 /gene="arsB" /locus_tag="PA2278" /db_xref="GeneID:878634" CDS 2506978..2508261 /gene="arsB" /locus_tag="PA2278" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="arsenite-antimonite efflux pump ArsB" /protein_id="NP_250968.1" /db_xref="GeneID:878634" /translation="MLIAFAIFLFTLVLVIWQPRGLGIGWSASIGALLALALGSVAPG DIPTVWNIVWNATATFIAVIVISLLLDEAGFFEWAALHVARWAGGDGRRLFAFCVLLG AAVSALFANDGAALILTPIVMSMLLALRFSPAATLAFVMAAGFIADSASLPLVVSNLV NIVSADYFGLGFGEYAAVMLPVNLVSVATSLLVLFLYFRRDLPPVYALEQLKPPRAAI RDRATFVVGGWMLLVLLAGLFALEPLGVPVSAVAAACAALLLAVAGRGRVISTRRVLR EAPWQIVVFSLGMYLVVYGLKNAGLTDLLAQLLNRLAEHGVWAAALGTGLLSAALSSV MNNMPSMLLGALSIQASDTAGAVREAMIYANVIGCDLGPKITPIGSLATLLWLHVLAR KGMRITWGYYFRVGALLTLPVLLATLSALALRLAI" misc_feature 2506981..2508216 /gene="arsB" /locus_tag="PA2278" /note="arsenical efflux pump membrane protein ArsB; Region: PRK15445" /db_xref="CDD:185342" misc_feature order(2507017..2507028,2507047..2507088,2507137..2507190, 2507260..2507310,2507314..2507367,2507386..2507457, 2507521..2507565,2507653..2507691,2507722..2507766, 2507809..2507865,2507935..2507982,2508061..2508120, 2508196..2508216) /gene="arsB" /locus_tag="PA2278" /note="transmembrane helices; other site" /db_xref="CDD:238538" gene 2508293..2508763 /gene="arsC" /locus_tag="PA2279" /db_xref="GeneID:877604" CDS 2508293..2508763 /gene="arsC" /locus_tag="PA2279" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="low molecular weight phosphatase" /protein_id="NP_250969.1" /db_xref="GeneID:877604" /translation="MRVLFMCTANSCRSILSEAMFNHLAPPGFEACSAGSQPSGRVHP RSLATLEQAGIATHGLYSKGSEAFEGAPPDIVITVCDAAAGEACPLYLGAALKAHWGL ADPSALDGDEALRDAAFHATLARIEQRCRAFLGLPFATLDRDQLKRELERIGSL" misc_feature 2508296..2508697 /gene="arsC" /locus_tag="PA2279" /note="Arsenate reductase of the LMWP family; Region: LMWP_ArsC; cd16345" /db_xref="CDD:319973" misc_feature order(2508311..2508313,2508317..2508334,2508602..2508604, 2508608..2508610) /gene="arsC" /locus_tag="PA2279" /note="active site" /db_xref="CDD:319973" gene 2508775..2509467 /locus_tag="PA2280" /db_xref="GeneID:878504" CDS 2508775..2509467 /locus_tag="PA2280" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250970.1" /db_xref="GeneID:878504" /translation="MSEQLPNLDPALLGDPPPVSGHRPRILLLYGSTRERSFSRLLVL EAARLLERFGAETRIFDPSGLPLPDDAPVEHPKVRELRDLVQWSEGQVWCSPERHGAL SAVFKAQIDWIPLALGAVRPTQGKTLALMQVCGGSQSFNVVNQLRVLGRWMRMFTIPN QSSVPKAYLEFDEAGRMKPSPYYDRVVDVMEELFKFTLLLRERTDFLVDRYSERKESA EQLSARVDQRSL" misc_feature 2508787..2509422 /locus_tag="PA2280" /note="NADPH-dependent FMN reductase; Region: FMN_red; cl00438" /db_xref="CDD:469770" gene complement(2509480..2510334) /locus_tag="PA2281" /db_xref="GeneID:878288" CDS complement(2509480..2510334) /locus_tag="PA2281" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250971.1" /db_xref="GeneID:878288" /translation="MLGSATGHYQARTVRPSMQYFDCDLSFTEPLRTHKVLPEGLCIV QMFDGQWRHSVDGGEPYLYNLGGPSVLGTGEPMEAFDILPAGSRVRLGGLRIAASYLE EELETGDGALRPLARLKGDGASFTQLSRCGAITALFERLYQNPYRGALGRLHEESLTL GLLVELAAYLGGADLRRARTPRAQRDLAHEARRLLEANLGEPPASLELARQLGVGETT LRRIFKNEFGRSMLQYVRDRRLEIGRQMVREGRWQIAQIAYRLGYSSPENFTHAYRAR FGHPPGRE" misc_feature complement(2509486..2510199) /locus_tag="PA2281" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" misc_feature complement(2509489..2509716) /locus_tag="PA2281" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene 2510622..2511050 /locus_tag="PA2282" /db_xref="GeneID:878167" CDS 2510622..2511050 /locus_tag="PA2282" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250972.1" /db_xref="GeneID:878167" /translation="MIAKWTAALLMGALAWGSCTAQAEEARPPVADKVVAYQGQQGLK VWTLRIGEAAAGEALLQVEGLDHDWDRLIHKVKVEKSARDSRYSTELNGSKYVILIVR DGWGELYLPGEQQTRQVAYSESLSSAGEPQAFLTDYLEQK" protein_bind complement(2510623..2510635) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2282" /bound_moiety="AmrZ" gene 2511057..2512514 /locus_tag="PA2283" /db_xref="GeneID:878172" CDS 2511057..2512514 /locus_tag="PA2283" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250973.1" /db_xref="GeneID:878172" /translation="MSHDTLRVRLLAFLFLIPLALYAWSAVQAFRVDSTLRDEQFMRD WSASVRNDPDAAGAIPRHLFRPAYGVEGHLHQFAEDAEAIRRDHPWLALRGWLAAIGK LCALASALVAAALLARLEYDGRRSMRSQAYLLGHLAPAWRRLGRLVPLHAGLLVAALA SQLLYEALWSYSHWHSHGFVALLFSLPLWLLFLGGLLMLRRLRGELLPLEEPVLHLLG RELDRVAAPGLWQWLGQIADRAGAPLPDHVVTGIEHCYFVTQAKVLLAPRGIPLEGRT LYIPLTYASVMSEAESAAIIGHELGHFAAGDTAHGASLSLLQRQVRLRIDRIAAPEVG HVGLLGKPGLWAALYFLDRFERAYLHWNRRQELAADKVGARVAGARVFAIALLRTCAL AGLIERLLASPQTRNLVHALTDHLRGNSLELDEQDSARRLEHPFDSHPPTYQRIADLS LALDDDLLRQARRIVSADDTQWLNRLLDAGHGESR" misc_feature <2511234..2512499 /locus_tag="PA2283" /note="Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]; Region: PksD; COG3321" /db_xref="CDD:442550" misc_feature 2511708..2512394 /locus_tag="PA2283" /note="M48 Ste24 endopeptidase-like, integral membrane metallopeptidase; Region: M48_Ste24p_like; cd07328" /db_xref="CDD:320687" misc_feature order(2511948..2511953,2511960..2511962,2512152..2512154, 2512164..2512166,2512371..2512373) /locus_tag="PA2283" /note="putative active site [active]" /db_xref="CDD:320687" misc_feature order(2511948..2511950,2511960..2511962,2512152..2512154, 2512371..2512373) /locus_tag="PA2283" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:320687" gene 2512511..2513182 /locus_tag="PA2284" /db_xref="GeneID:877762" CDS 2512511..2513182 /locus_tag="PA2284" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250974.1" /db_xref="GeneID:877762" /translation="MIPPGAQTPCPAGTRGDEATQLRRFVASVPNRISIGAARGAAPL SALLGLLLLGGAWTLRDHPGPGHEAAALCLLAAAALLMCLACLQRNARSAPFLVLGQG RLRARSLSAPLDLLEVADLRLEDGVWFSAIVLELHGKALPAPSTRPLDPFAARAVSEC RDGPRVRLLSPGWRLNGRNLSLLEAAEVIDLYLDIARAQARLRQLGEIPPSASSSLPT PRIFP" gene 2513179..2513841 /locus_tag="PA2285" /db_xref="GeneID:878202" CDS 2513179..2513841 /locus_tag="PA2285" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250975.1" /db_xref="GeneID:878202" /translation="MSNQEPRDLVSNLAETLGAEHEELNQAKTAEVIAHLERVIANVP PATEFTNTRKYVVLGPLLSIVPFIMTGMWFSQGKPGVGVVGLLLGLFGLFLGYQHRNS GKTPFMRLTRTQLWADSLSAPVELADVIDFSVKADMLQTTQTLHLRPETPLPTHRAVR QVFASQAMAFKGKDPRITIMSAGLQSDGKKLDCDDMAAILDAYIQAAHAQRYLQQLRS QG" protein_bind 2513704..2513716 /locus_tag="PA2285" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2286" /bound_moiety="AmrZ" protein_bind complement(2513736..2513748) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2286" /bound_moiety="AmrZ" gene 2513842..2515386 /locus_tag="PA2286" /db_xref="GeneID:878023" CDS 2513842..2515386 /locus_tag="PA2286" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250976.1" /db_xref="GeneID:878023" /translation="MKGTVHPRRLLLCLVLVPALLAGLGAWQSWRAEQQAERLGAAQQ RVERALAEARALPPRASVRVDGRAYVRDLALARLDERLADTRSAQRLSRFAAVLADSG ACLAALVAVLGAVSLAGIAGAARSALRSRRCLLLWFELGRRLLPCLLLAQIGLLALAL ACAGTFEILGLWRVGQVPVSEGRTQLSVALILLGLLASAWQMLAKISRLRLRPAPALD VIGRRLGEEDAPELWTLLRELAARLDTPAPQHLLVGLCDGFYVTANRVCLQPSGEHLE GRSLYLSLPLLGLLDRAELSAVIAHELAHFAGRDAHYSLRFLPIYQGAASQLAAIEEQ EANVFERAALEPARLLAGYFLERFGLAVNHWSRLREFAADRRAAQLAGAPAMASALLR SAAAGAPIRAFLEHCLLAPARAPDNLVDAIHVYLGQSGLEAPAPGAEGLQVHPQDTHP PLGLRCTALGESFERTWAGTAGRAVPTRPPSQALGVWFGAPLALSRALSADLLGKTCE NPHARN" misc_feature 2514466..2515224 /locus_tag="PA2286" /note="M48 Ste24 endopeptidase-like, integral membrane metallopeptidase; Region: M48_Ste24p_like; cd07328" /db_xref="CDD:320687" misc_feature <2514712..>2514990 /locus_tag="PA2286" /note="Peptidases M48 (Ste24 endopeptidase or htpX homolog) and M56 (in MecR1 and BlaR1), integral membrane metallopeptidases; Region: Peptidase_M48_M56; cl28898" /db_xref="CDD:333718" misc_feature order(2514742..2514747,2514754..2514756,2514949..2514951, 2514961..2514963,2515186..2515188) /locus_tag="PA2286" /note="putative active site [active]" /db_xref="CDD:320687" misc_feature order(2514742..2514744,2514754..2514756,2514949..2514951, 2515186..2515188) /locus_tag="PA2286" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:320687" misc_feature order(2514742..2514747,2514754..2514756,2514916..2514918, 2514928..2514930) /locus_tag="PA2286" /note="putative active site [active]" /db_xref="CDD:320682" misc_feature order(2514742..2514744,2514754..2514756,2514916..2514918) /locus_tag="PA2286" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:320682" gene 2515373..2516008 /locus_tag="PA2287" /db_xref="GeneID:879688" CDS 2515373..2516008 /locus_tag="PA2287" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250977.1" /db_xref="GeneID:879688" /translation="MQETDETLDELPPLEARCEIREVSRGTACVALLAGLVAGATGLW LASLPNAWRLASGQWLFWLPAALLLGGGLYACLAGVFLYRRHGQVALTLTPESIAFAN APQVPMYTFQSLEIERGRWLELTFATTFDCTAPRFDSHARFDPRAFARPEARAVAGGK RVKLALCGAALNGQKMELEPLARLIYRYILAGHRQRALQHHRAPGSDGSGA" gene complement(2516021..2516308) /locus_tag="PA2288" /db_xref="GeneID:878141" CDS complement(2516021..2516308) /locus_tag="PA2288" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250978.1" /db_xref="GeneID:878141" /translation="MSHNLAELPLSRRHALEREKQACLRLHLSRNRASERLERAVRDE VERLLGARERQGTGWPEWVSAELCVADDPLFVRKVVARLKAAVDWQRQRAA" gene complement(2516429..2518561) /locus_tag="PA2289" /db_xref="GeneID:878189" CDS complement(2516429..2518561) /locus_tag="PA2289" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250979.1" /db_xref="GeneID:878189" /translation="MPSRPRPSFVSHLLPGSLALCGLAIACAVQGEERRSLEPMVVTG SYNPSDTFDLPFSVDSIERRQIADGQLGINLSEVLPRVPGLVVQNRQNYAQDLQISSR GYGARSAFGIRGLKLLADGIPASTPDGQGQAATLNLDVAERIEVLRGPASTIYGSNAG GVIQMFSRDGQGAPRVGAEATVGSDGLSRNHLYTEGEGDGVGFLVDASRMDTDGYRDH SAARRDQTFAKLNFRPDADSRLALIYSSLEQNDIEDPLGQTWDAYKYDPRSVTANAEL YDTRKSIDHQQAGMNYERYFGEATLQVNAYVGKRSVVQYQAIPKQIGCESNPRCQRNG AVIDFDRDFHGGTVRWLQPVSQAPGELNLTVGLDYDQSRDDRRGYQNFNGDQLGVKGK LRRDEVDTATSLDPYLQASWAIDAWTLQAGVRHSTMKMEVDDRYLSNGDASGSRRYRK NTPSFSVMYAFTPDLHGYLSAGKGFETPTQAEMAYAPVAANAPDVFNFGLKPATSSQY EAGLKARLWGNTRVNAAIFQVRTEDEIVVASSLGGRTSYQNAGKTLRRGFELGLESEL SEHWNANLAYTRLSATYDSDFEAGGKTIGKGKHLPGVPESSLFGELVWKPAEGISMGW EGMYRSQVYVEDSNSEKAAPSYAVFNWRTRFEQRLGAWTFHQLVRLDNLFDRQYVGSV IVGDGNRRYYEAAPGLSWYAGAGVEYQF" misc_feature complement(2516438..2518513) /locus_tag="PA2289" /note="Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; Region: FecA; COG4772" /db_xref="CDD:443804" gene complement(2518693..2521104) /gene="gcd" /locus_tag="PA2290" /db_xref="GeneID:877639" CDS complement(2518693..2521104) /gene="gcd" /locus_tag="PA2290" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glucose dehydrogenase" /protein_id="NP_250980.1" /db_xref="GeneID:877639" /translation="MSEGNRSRSRLLPSLLGLLILLSGLALLAGGIKLASLGGSLYYL LAGIGLALSGLLLLLGKRAALGLYALVLFASTVWALWEVGLDWWQLVPRLALWFVFGL LLWLPWFRRPLLADGPAPLGTAALGVAVVLAGAAAVGSQFTNPGQIVGRIDRDSGMTS TAPAMPDGDWQAYGRTEFGDRYSPLKQITPANVGQLEEAWRIRTGDLPTADDPLELTN ENTPLKVNGMLYACTAHSKVLALDPDTGAEIWRFDPQIQSPVGFKGFAHMTCRGVSYY DEEQYARSDVGAPPAALSEAGKAVAASCPRRLFLPTADARLIAINADNGKVCEDFGVK GAVDLTAGIGPFTPGGYYSTSPAAVTRNLVIIGGHVTDNESTNEPSGVIRAFDVHDGK LVWNWDSGNPDETEPLAPGKFYTRNSPNMWSLASVDEKLGQVYLPLGNQMPDQWGGNR TPGAEKFSAGLVALDLNTGKLRWNYQFTHHDLWDMDVGSQPTLLDLKTADGVKPALIA PTKQGSLYVLDRRDGTPIVPIREVPAPQGAVEGDHTAPTQARSDLNLLRPPLTERDMW GSSPFDQMLCRIQFRSLRYEGQYTPPSEQGSLIYPGNVGVFNWGGVSVDPVRQILFTS PNYMAFVSQMVPRDKVPSGSKREGETSGVQPNTGAPYAVIMHPFMSPIGLPCQAPSWG DVAGIDLTTAKVVWQHKNGTSRDNTPVPIGLTVGVPSMGGSITTAGGVAFLSGTLDQY LRAYDVKDGKQLWQARLPAGGQATPMSYTGKDGRQYVLIVAGGHGSFGTRMGDYIIAY ALPRQ" misc_feature complement(2518702..2521008) /gene="gcd" /locus_tag="PA2290" /note="membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; Region: PQQ_membr_DH; TIGR03074" /db_xref="CDD:274418" misc_feature complement(order(2518708..2518710,2518714..2518716, 2518846..2518848,2518855..2518863,2518870..2518872, 2518876..2518878,2519017..2519019,2519026..2519034, 2519041..2519043,2519047..2519049,2519524..2519526, 2519533..2519541,2519548..2519550,2519554..2519556, 2519686..2519688,2519695..2519703,2519710..2519712, 2519716..2519718,2519920..2519922,2519929..2519937, 2519944..2519946,2519950..2519952,2520118..2520120, 2520127..2520135,2520142..2520144,2520148..2520150, 2520355..2520357,2520364..2520372,2520379..2520381, 2520385..2520387,2520505..2520507,2520514..2520522)) /gene="gcd" /locus_tag="PA2290" /note="Trp docking motif [polypeptide binding]; other site" /db_xref="CDD:199838" misc_feature complement(order(2518945..2518947,2519572..2519574, 2519839..2519841,2519995..2520000,2520043..2520045, 2520292..2520294,2520307..2520312,2520448..2520450)) /gene="gcd" /locus_tag="PA2290" /note="putative active site [active]" /db_xref="CDD:199838" gene complement(2521258..2522616) /locus_tag="PA2291" /db_xref="GeneID:880793" CDS complement(2521258..2522616) /locus_tag="PA2291" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glucose-sensitive porin" /protein_id="NP_250981.1" /db_xref="GeneID:880793" /translation="MKSHLLRPALRPVAGGLLSASLLCNAVHAAEAFSPNSKWMLGDW GGKRTELLEKGYDFKLEYVGEAAANLDGGYDDDKTGRYTDQFALGVHMDLEKILGWKA TEFQFTVTERNGKNLSNDRIGDPRAGHISSVQEVWGRGQTWRLTQLWLKQQYFAGALD VKFGRFGEGEDFNSFPCDFQNLAFCGSQVGNWAGSIWYNWPVSQWALRVKYNFAPDWY VQVGAYEQNPSNLETGNGFKMSGSGTKGALLPVELIWQPKVGAEQLPGEYRLGYYYST AKADDVYDDVDGQPQGLTGNDFKSRGSKHGWWVVAQQQVTSHNGDASRGLSLFANLTV HDKATNVVDNYQQLGVVYKGPFDARPKDDIGLGIARIHVNDDVKKRQRLVNQVNGIDD YDNPLYQPLQDTEYNAELYYGVHVTDWLTVRPNLQYIKQPGGVDEVDNALVAGIKIQT VF" misc_feature complement(2521261..2522598) /locus_tag="PA2291" /note="Carbohydrate-selective porin OprB [Cell wall/membrane/envelope biogenesis]; Region: OprB; COG3659" /db_xref="CDD:442876" gene complement(2522958..2523239) /locus_tag="PA2292" /db_xref="GeneID:879527" CDS complement(2522958..2523239) /locus_tag="PA2292" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250982.1" /db_xref="GeneID:879527" /translation="MTQPPLRLRNSARDGWLMLEWADGAVSRIDHARLRAACPCAQCR AQRLRGRIVAAEQGVRLRDIRLQGYGVQLLFDDGHERGIYPWSYLRDEL" misc_feature complement(2522970..2523218) /locus_tag="PA2292" /note="Gamma-butyrobetaine hydroxylase-like, N-terminal; Region: GBBH-like_N; pfam06155" /db_xref="CDD:461840" gene complement(2523236..2524201) /locus_tag="PA2293" /db_xref="GeneID:879599" CDS complement(2523236..2524201) /locus_tag="PA2293" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250983.1" /db_xref="GeneID:879599" /translation="MTCKNATLPEILELSPRLEDADPGVRRLALIELADLELPEALPL LVAALRGDPDPGVRGEAARLLEAWEEDAVVDALCAALADPVPAVADAAAQSLGELKEP AAGRRLLPWLGHADAFVRASVLRALRELRLEESAVPALAALGDPQAAVRREAVAVLGW LRHQPALAELARLASADVDPEVRRAATGALGLSREATVLPALCAALADAQWQVREEAA TTLGKLGREEAGEPLLKALADDYWQVRLRAARALGRLRHRPAREALEALLGHPIGNLR KEAALALGELADPASAQALRVAEGDGDPEVRKAVRIALAQLRMPA" misc_feature complement(2523257..>2524177) /locus_tag="PA2293" /note="FAD binding domain; Region: FAD_binding_2; cl46878" /db_xref="CDD:481218" misc_feature complement(2523899..2523985) /locus_tag="PA2293" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature complement(2523719..2523838) /locus_tag="PA2293" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature complement(2523626..2523703) /locus_tag="PA2293" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature complement(order(2523254..2523259,2523266..2523268, 2523275..2523280,2523347..2523352,2523359..2523361, 2523368..2523373,2523440..2523445,2523452..2523454, 2523461..2523466,2523533..2523538,2523545..2523547, 2523554..2523559,2523626..2523631,2523638..2523640, 2523647..2523652)) /locus_tag="PA2293" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:293787" misc_feature complement(2523527..2523610) /locus_tag="PA2293" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature complement(2523437..2523520) /locus_tag="PA2293" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature complement(2523347..2523427) /locus_tag="PA2293" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature complement(2523251..2523337) /locus_tag="PA2293" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" gene complement(2524198..2525052) /locus_tag="PA2294" /db_xref="GeneID:877955" CDS complement(2524198..2525052) /locus_tag="PA2294" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_250984.1" /db_xref="GeneID:877955" /translation="MTTAGNSLGRIQIRDLSIRLGQGSEAFEAVRDLNLEARPGEFVC LLGPSGCGKSTLLGALAGHLRPSAGSVRVDGRSVEGPSPQRGMVFQQHTLFPWRRVRD NVAFGLKMQGLARAERNRRAMEMLGLVGLADFAGRWPGQLSGGMQQRVEIARVLVNRP RLLLMDEPFGALDAQTRLKMQTLLLDVWARVRTTVLFVTHDIDEALYLADRVLVMSPR PGRIIADLALDFPRPRDTRLVTSADFVRLKRHCLELLDHDDGRQLPRLTPLGLPPGIT PDRLRIAI" misc_feature complement(2524270..2525052) /locus_tag="PA2294" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]; Region: TauB; COG1116" /db_xref="CDD:440733" gene complement(2525049..2525846) /locus_tag="PA2295" /db_xref="GeneID:879766" CDS complement(2525049..2525846) /locus_tag="PA2295" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_250985.1" /db_xref="GeneID:879766" /translation="MSSLPISRPWRWATRAASLAACLAFWQLAAGLQLNLGLVTFANV PTPGAVLLAACNLAQSSVLLAHLGASLARVFAGYLLAAALGIALGLAIGRSAWAEALL LPPLEVLRPIPAVAWIPLAILMFPSSEASMIFITFTGALFPILLNTVHGVEALDPRLL ASARSLGAGRRALLREVLLPGAGPGIFTGLAIGMGTSWFCLVTAEMISGQWGLGYYTW ASYNIQNYDEVVVGMLLIGLFGMGSSGLVKRVGASLTPWYAAGGKVR" misc_feature complement(2525076..2525846) /locus_tag="PA2295" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]; Region: TauC; COG0600" /db_xref="CDD:440365" gene complement(2525871..2527277) /locus_tag="PA2296" /db_xref="GeneID:877583" CDS complement(2525871..2527277) /locus_tag="PA2296" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250986.1" /db_xref="GeneID:877583" /translation="MRLRAILASLALALTSLGAQAETIRVAIGTQDTTINCAAGGLLI RELGLLEKYLPRDGRYKDADYRVEWKNFTSGAPLTNEMVAGKLDFGAMADFPGTFNGV AFAAAGKRSLFISVLSGSTRGSGNGIVVPSGSPVQSLAELKGQTISVPFASTAHGMLL RAVAAQGWDPQRDVTIIAQPPEIAGSALQANKIAAHADFVPFAELFPNRGFARKIYDG SQANAPTFHGALVDAAYAERYPEVVVAYLRASIEANRLLAAEPEKYSELIEKVTGIEA EVNYLFHGPLGLQTRDQAWKPEYRQALATSIDTLKLLKKADRGLDVERFVDDRYIREA YRQAGLDYQAALADYAPSPLRASDARSGRPIEEFERVAQIWVKGEARVRHYASPESAL ADLAELKAQGKAIRAIYAQDRDSGIKLLANQAWFVRDGEGRLNAFLLREQAQDYARRH GGEVRDFAAASQQALALR" misc_feature complement(2526435..2527205) /locus_tag="PA2296" /note="Putative substrate binding domain of sulfonate binding protein-like, the type 2 periplasmic binding protein fold; Region: PBP2_SsuA_like_3; cd13559" /db_xref="CDD:270277" misc_feature complement(order(2526597..2526599,2526672..2526674, 2526681..2526686,2526813..2526815,2526828..2526830, 2526900..2526902,2527053..2527055,2527182..2527184)) /locus_tag="PA2296" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270277" misc_feature complement(2525907..2526167) /locus_tag="PA2296" /note="Region: NosL; cl01769" /db_xref="CDD:470335" gene complement(2527412..2527657) /locus_tag="PA2297" /db_xref="GeneID:877741" CDS complement(2527412..2527657) /locus_tag="PA2297" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ferredoxin" /protein_id="NP_250987.1" /db_xref="GeneID:877741" /translation="MAYRPQDIFFRSSAPVTIDEDRCIADKGCTVCVEVCPMDLLAID PTTRKAYMAYDECWYCMPCEKDCPTGAVKVEIPYLLR" misc_feature complement(2527415..2527615) /locus_tag="PA2297" /note="NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit [Nucleotide transport and metabolism]; Region: PreA; COG1146" /db_xref="CDD:440761" gene complement(2527743..2529467) /locus_tag="PA2298" /db_xref="GeneID:878526" CDS complement(2527743..2529467) /locus_tag="PA2298" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_250988.1" /db_xref="GeneID:878526" /translation="MNTLEQEYDIVVIGGGTAGPMAAIKAKEHDRELRVLLVDKANVK RSGAISMGMDGLNNAIVPGHATAEQYTREITVANDGIVNQAAVYAYASHSFETLRQLD RWGVRFEKDETGDYAVKKVHHMGAYVLPMPEGHDIKKVLYRQLKRARIPIANRLVCTR LLTDAEGAVNGVLGFDCRSGDFHVIRAKAVILCCGAAGRLGLPSSGYLMGTYENPTNA GDGYAMAYHAGAELANLECFQINPLIKDYNGPACAYVTGPLGGYTANARGERFIECDY WSGQMMWEFHQELEGGNGPVFLKLDHLAEETIQTIEDILHGNERPSRGQFHAGRGTDY RQQMVEMHISEIGFCSGHSASGVWVNEKAETSVKGLYAAGDMAAVPHNYMLGAFTYGW FAGRNAAEYVAGRAFSAVDRAQVERERARIEAPLLREHGLPAAQVEYKLRRLVNDYLQ PPKVTRKMELGLQRIQAIAEDLERIKADNPHELMRALEVSVIRDCAEMAARASLFRTE SRWGLYHHRVDYPRRDDAAWFCHAHLKKDEQGRMASFRKPVEPYLFAIDEGEQQAYQR LRLRNDAA" misc_feature complement(2527812..2529467) /locus_tag="PA2298" /note="putative oxidoreductase; Provisional; Region: PRK08275" /db_xref="CDD:181346" gene complement(2529464..2530213) /locus_tag="PA2299" /db_xref="GeneID:879591" CDS complement(2529464..2530213) /locus_tag="PA2299" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_250989.1" /db_xref="GeneID:879591" /translation="MGKLLPLSPVPLYSQLKELLRGRILDGVYPPLSRMPSENELGKA FDVSRITVRQALGDLQKEGLIFKIHGKGTFVARPKAFQNVSTLQGLGESMTQMGYEVI NRLHGLRYVPAGARVAERLRVEEGSPVCEIKRVRLVNREPVSLEVTYLPQALGERLEK ADLVTRDIFLILENDCGIPLGHADLAIDAVLADADLTRALAVEEGAPIMRIERLTHAA DGAPLDFEYLYYRGDAFQYRLRIDRQKGERA" misc_feature complement(2529485..2530192) /locus_tag="PA2299" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: MngR; COG2188" /db_xref="CDD:441791" gene complement(2530389..2531840) /gene="chiC" /locus_tag="PA2300" /db_xref="GeneID:878587" CDS complement(2530389..2531840) /gene="chiC" /locus_tag="PA2300" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="chitinase" /protein_id="NP_250990.1" /db_xref="GeneID:878587" /translation="MIRIDFSQLHQAREDAAAAMPSIAGKKILMGFWHNWPAGAADGY QQGSFANIALEDVPSEYNVVAVAFMKGRGIPTFQPYNLSDAEFRRQVGVLNAQGRAVL ISLGGADAHIELHAGQEQALAAEIVRLVETYGFDGLDIDLEQSAIDLADNQRVLPAAL KLVREHYAGQGKHFIVSMAPEFPYLHKNGKYVPYLQALEGVYDFIAPQYYNQGGDGLW VQEANGGKGAWIAQNNDAMKEDFLYYLTESLATGSRDFVRIPAQRLAIGLPSNVDAAA TGYVIDPAAVSNAFRRLEAAGHAIKGLMTWSVNWDDGLNKRGERYNWEFRKRYASLIH DGEGGDQRPAAPQGLRLLERGETSLVLAWNASSGQRPIDYYSLYRDGAMVGQSAALGS TDSGLTADTRYSYFVTATDTQGNQSLPSEGLEVSTSGGAVDPQFPQWRENQAYRVDDG VTYEGLRYLCLQAHTSNSGWTPPVAFTLWRPLR" misc_feature complement(2530845..2531762) /gene="chiC" /locus_tag="PA2300" /note="GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18...; Region: GH18_chitinase_D-like; cd02871" /db_xref="CDD:119350" misc_feature complement(order(2530923..2530925,2531211..2531213, 2531217..2531219,2531412..2531414,2531418..2531420, 2531637..2531639,2531745..2531747)) /gene="chiC" /locus_tag="PA2300" /note="putative active site [active]" /db_xref="CDD:119350" misc_feature complement(<2530542..2530820) /gene="chiC" /locus_tag="PA2300" /note="Chitodextrinase [Carbohydrate transport and metabolism]; Region: COG3979" /db_xref="CDD:443178" misc_feature complement(2530395..2530526) /gene="chiC" /locus_tag="PA2300" /note="chitin-binding domain of Chi A1-like proteins; Region: ChiA1_BD; cd12214" /db_xref="CDD:213177" gene complement(2532059..2532601) /locus_tag="PA2301" /db_xref="GeneID:878441" CDS complement(2532059..2532601) /locus_tag="PA2301" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250991.1" /db_xref="GeneID:878441" /translation="MVLREYTQRHRLDAVAPADYHRHLPEQVARGLPSAELVVFRVAD EHSDTAAFSARYGFGLEDCANTLVLRYKRDGAEGYAAVVNLGSRRLDVNGAVKALLGA RRLSFAAREVATELTGMQFGGITAFGLPEGMPLLVDAAVFERPLVVMGAGVRETKLLL SPALLKDLPGVVVAELSEAG" misc_feature complement(2532080..2532496) /locus_tag="PA2301" /note="PA2301 is an uncharacterized Pseudomonas aeruginosa protein with a YbaK-like domain of unknown function. The YbaK-like domain family includes the INS amino acid-editing domain of the bacterial class II prolyl tRNA synthetase (ProRS), and it's...; Region: PA2301; cd04939" /db_xref="CDD:240137" misc_feature complement(order(2532152..2532154,2532233..2532238, 2532407..2532409)) /locus_tag="PA2301" /note="putative deacylase active site [active]" /db_xref="CDD:240137" gene complement(2532669..2539043) /gene="ambE" /locus_tag="PA2302" /db_xref="GeneID:878274" CDS complement(2532669..2539043) /gene="ambE" /locus_tag="PA2302" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein AmbE" /protein_id="NP_250992.1" /db_xref="GeneID:878274" /translation="MSASEDLQSAVQPAASEALEGFPLSPLQTRAWRRHAERPENTVV GVRLHAPADPVATLERLRRALDGEAQLRVAYRTMPGMSLPVQVLDGRAADLLVERLPG DGDWAGRFARESARLAASPLGGEGQPVLALGLLLDAAGETLQGLLLAAPAFVVDAASL VALLRRGLGPAGQASADEGDEALLFQHFSEWANEALAGEDGESASGYWREQAAVAAES PLALADDLGEGEWTARRLLPRALLERLAANGLPEAAALLAWTQVAGQFQGDEGLPLEM ARLVSGRLFNEFAELAGPFAGVAPLCLENVRAGSVGERLDALQAAILAQEEAAALRDP FAPDWPLAELGFAWLAGELDGAGVAELDCRQPPLGGFLELQVLPHGEGRLASLRVRRD HDGTLAGRLLDAWVECLESIAADRQLPLAGLPLIGAAERERYQAWQGERVEPAPVESL VAAFDLRAALQPQAPALLDAHGSLDFATLRARSEAVAEALLAAGVRPGQAVAVMTGRN REAIVALLGVMRAAAVYTPVNPEFPAARVERMREAGGIVFALADAECAGRAREAFAGA CLDLSTLPLAGSGMSLPAPGGRDAAYMIFTSGTSGQPKGVVVEHASALNLSQALARTV YANVVGEGLRVTVNAPFSFDSSIKQILQLLSGHCLVLVPQEVRSDPQRMLGFLEERRI DVLDCTPSLFRLLLQAGLDDAHPALPGRILVGGERFDEASWEVAAGWRRCQVFNLYGP TEATVNASLARVAEHARPTIGRALANVDLHVVDGLGRRKTRGASGELWIGGAGVARGY AGDAGEAAGRFVEEGWPGSGRLYRSGDLVRWRADGCLEFLGRIDEQVKINGYRIELGE IRSALLEHPAVGEAAVLTDEADAAEPGADRRIVAFVTAAEETADESWLEVDLPSGHRV AGLNLNETEYVYQEIFVDEVYSRDGIVLPPDAVVLDVGANIGLFSLYIASRAPRARVV AFEPLAPIRRRLEANLGRYAPQVEVFGIGLSDAEREETFTYYPGYSTFSGIAEYADAS GERDVIRRYLSNQGEEGGANLLLDNIDEILDDRLRAEAHRCRLRRLDQVIGELGLERI DLLKIDVQRAEMDVLLGLDDAALAKVRQIVLEVHDKRDGATAGRADALSDLLRRHGFE VSIRQDALLEGTDRYNCYAVRPGYAESLAERIDWRALAPRPAAALGGELSEQALRGFL EARLPAYMLPSRIARVERLPLTAEGKLDRRALLAALAAEAAAQTLEAPANATEAALLE IWKSVLKRPAIGVSDNFFQVGGDSIRLIQMQVMAREAGLAFTLRDVFNHQSIRELARL LAAPASPADALGTSAPQSLEPFALLSAAERKRLPEGLDDAYPMTSLQQGMLLQSEASG DPRLLHNVVLHEVHGRLDGELLARAWAILIGRHAILRTGFDLHGGQVPLQWVHPATAV AAEVPVHDLCGLDGETRRLRLRAWIEEEQATPFDWSRPPLVRLAALALDERRFALGVA EHHSVLDGWSLQSLVDELLAVYADLLAGVVAREAEAPAVGFRDYVALEREAEANAASA LFWLDYLAGARYRPLPGLAEEGPRRMAAVRVDVPADSLSRLRALAERSGLPLRSLLLA AHGRALCRFSDADEVVTGFVSHGRPEEPGADRLLGLFLNTLPCRLSASVDLLDSARRA FDYERASLEHRRHPLAAIRRRNRELRLDSLFNFVDFHQDDAAPAGVRHGGILDQVVVD VDVPLAVDFEVAGERLEVGFQYAAGRFPAERAEALAGAYREALLALLGDPVQPPAAAQ AEDSVELRRVLKVLSRVLGRPLAADQGFASAGGHSLLGVQAIAELRRLTGRQLSLGLL QGDPDAREVVRRCHAADAPPLPPATERARALWLQRSGSAQPRLRLIALPPAGGNAGTF RGWDARLPADVELLAIQYPGRQERQDEPFVTDVEAMLCAIDDALLPLLDRPFALIGAS LGGMLAYELAARLESLHGLRARQLFVISSRAPGPDLEYPRFHAMGDAELLRTLREYDV LPLEVLDDPELREISLATLRADSRLAADYRYRPREPLAIPITAILGEQDPGVSRVAID GWRRHASRYELETLAGGHGLVVTAAEEVCAILRQRLAPDVPGGVPANLAT" misc_feature complement(2535261..2539037) /gene="ambE" /locus_tag="PA2302" /note="seryl-AMP synthase component of non-ribosomal peptide synthetase [Secondary metabolites biosynthesis, transport and catabolism]; Region: EntF; COG1020" /db_xref="CDD:440643" misc_feature complement(2536314..2537660) /gene="ambE" /locus_tag="PA2302" /note="The adenylation domain of nonribosomal peptide synthetases (NRPS); Region: A_NRPS; cd05930" /db_xref="CDD:341253" misc_feature complement(order(2537232..2537237,2537241..2537258, 2537265..2537267)) /gene="ambE" /locus_tag="PA2302" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341253" misc_feature complement(order(2536524..2536526,2536533..2536535, 2536569..2536571,2536764..2536766,2536821..2536838, 2536896..2536901,2537253..2537258)) /gene="ambE" /locus_tag="PA2302" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341253" misc_feature complement(2534928..>2535452) /gene="ambE" /locus_tag="PA2302" /note="peptide synthase; Provisional; Region: PRK12467" /db_xref="CDD:237108" misc_feature complement(2533716..2534966) /gene="ambE" /locus_tag="PA2302" /note="DCL-type Condensation domains of nonribosomal peptide synthetases (NRPSs), such as terminal fungal CT domains and Dual Epimerization/Condensation (E/C) domains; Region: DCL_NRPS-like; cd19536" /db_xref="CDD:380459" misc_feature complement(2533494..2533670) /gene="ambE" /locus_tag="PA2302" /note="Phosphopantetheine attachment site; Region: PP-binding; pfam00550" /db_xref="CDD:425746" misc_feature complement(2532702..2533406) /gene="ambE" /locus_tag="PA2302" /note="Surfactin synthase thioesterase subunit [Secondary metabolites biosynthesis, transport and catabolism]; Region: GrsT; COG3208" /db_xref="CDD:442441" gene complement(2539063..2540082) /gene="ambD" /locus_tag="PA2303" /db_xref="GeneID:879522" CDS complement(2539063..2540082) /gene="ambD" /locus_tag="PA2303" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein AmbD" /protein_id="NP_250993.1" /db_xref="GeneID:879522" /translation="MSASFSAPRLRPRQLSAGDLVEESLLDPANDYLRIVRARQPGMD LRQWIAAAGAGLRDSLLRHGGILFRGFAVDGAEGFSQAVQSFSPNMLDYLERAAARQE VAHRVFTSTEFSPDGWIPPHHEMSYSHNWPSYIHFYCQTPPATQGRTPLADERRVSAR IPEAIRQRFLRHGVCYVRNYGPEIDLTWQEGFQTDSRAEVEAYCRQTGTQWTWLDDQR LNTRQVRQAMVRHPLSGETLWFNHAHMFHVSNMPPALARALLDEVGEQGLPRNAYYGD GSPIEAEVLDTIRAAYREETRAFAWERGDVLMLDNFISVHGREPYTGERKVLVAMTDL HVHQP" misc_feature complement(2539096..2539953) /gene="ambD" /locus_tag="PA2303" /note="Taurine catabolism dioxygenase TauD, TfdA family; Region: TauD; pfam02668" /db_xref="CDD:367137" gene complement(2540079..2541167) /gene="ambC" /locus_tag="PA2304" /db_xref="GeneID:879754" CDS complement(2540079..2541167) /gene="ambC" /locus_tag="PA2304" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein AmbC" /protein_id="NP_250994.1" /db_xref="GeneID:879754" /translation="MERTAPSLTGRGFARPRNLSPRSSEALVRRPAAERDGLPLLIEA QAPGLSLADWIREQGQSLHDDLNLAGGLLLRGFEVDSAERFRAAAAAFAPQLLDYKER SSPRSQVSGEVYTSTEHPVDQPIFLHNEQSYTADWPLYIMFHCQVAPLEGGATPVAAN RLVLRHLPDELLERFGRLGILYVRNYRAGLGLSWREAFQTDSRAEVEAFCAEHRIAHA WIGDEHLRTWQRRAAFQRHPYTGERLWFNHGMFFHATSLEPGLRDALLRSVAEEDLPY QTYYGDGSPIEAQTLATIRSAIDRETRRFDWRVGDVLILDNMLAQHGREPFRGPRRIL TIMSTPYSSLAPADVPPTPPRLALGGAA" misc_feature complement(2540166..2541020) /gene="ambC" /locus_tag="PA2304" /note="Taurine catabolism dioxygenase TauD, TfdA family; Region: TauD; pfam02668" /db_xref="CDD:367137" misc_feature complement(order(2540175..2540177,2540202..2540204, 2540703..2540705,2540778..2540780,2540784..2540786)) /gene="ambC" /locus_tag="PA2304" /note="active site" /db_xref="CDD:238154" misc_feature complement(order(2540202..2540204,2540778..2540780, 2540784..2540786)) /gene="ambC" /locus_tag="PA2304" /note="iron coordination sites [ion binding]; other site" /db_xref="CDD:238154" gene complement(2541197..2544946) /gene="ambB" /locus_tag="PA2305" /db_xref="GeneID:878073" CDS complement(2541197..2544946) /gene="ambB" /locus_tag="PA2305" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein AmbB" /protein_id="NP_250995.1" /db_xref="GeneID:878073" /translation="MQERHGLPLRSFSSGKALTAGRAVRPEVAQERRYLQGAPLGLEL PGRIALRDPHCAWQWFEPEAAAEAFPAAHWLAAFLVLLGRYGNEEITLGFPEPITVRG RQAPALLRSSYRAMESSAERSARLAEELDDARRQLSADGQERAALAGRCAVQVLAARP TASSPGWLALVLAADGSVGLALRDPQYDELRRIAGHLARLARGLVDAQACVGRLPWLD ADEERRLQALRSEPQAAPSRGVLHHLFEAQARRTPQRIAVHAADRSLSYAELERESAA LAVRLRAAGVAPEQRVGVCLRRDSGLLVGLLGVLRAGGCYVPLDPAYPEERVAYMLDD ADCLLVLVDASTRERVAALGRPCLTLEEGGDQANDLALPASEVGADHLAYIIYTSGST GRPKGVAIEHGSAHAFLRWAGQHYAAEEWSGVLAATSVCFDLSVYELFGTLAEGGTLH LVENLFSLPDYPRRDEISLLNTVPSVCAALLALGDLPGGVRTLNLAGEPLRGHLVRQI RGQPQVRRLVNLYGPTEDTTYSTVHELDLHAEALDEPPIGRPLPGTTVEVLDGFEAPL PLGVAGELYLGGIGLARGYFGKPEQTAERFRVDPGSGERRYRTGDRVRMREDGVLEHL GRLDDQVKFNGFRIELGEIASCLASFPGVSEACAMLTEDSAGLRRLVGYLAAPFAPPL QALNEHLGQSLPHYMLPSAFVVLAELPKTLNGKIDRKALPRPQATGAEPQALPSDPLE QALHQAWQAQLGAPPRAGQGFYAAGGDSLRAVHLLATLRQRLSRRVPLQAFAGGPATP EALLELLRQAAPEGDEPEPSAGAAGLSLAERRLWVAQQLAPEDTSYNLLAHLRIVGAT ADAIEQALRQLLERHVALRRRVETGVDGPQPHALAAHAVPLQRLLASDAVHAERLLED GVRREGARVFDLAHEAPARLLLVVTRDSARADLLLSVHHYAFDDVSLAVFAAELKTLL DGGRLGVLASTPEQVAARERAALASGRLDRVAERWAERLLPLAKAPGAAPARPEESGG RAGQRLALPVSAAVHAACRALAERTSVSPFSAALQAFAEVLGAELGVDDLLVGVALAG RSRLEMQGLVGCFVNLLPLAVGLRPEQSVEWRLRQVGHDLLELLEHQDVPLECVTQAL RQRGASGLPIRIACGAHNGRAAPAVDAGVRVEADFIPVPGARLDLTLWLEDQPQGWLA VWTGVSAIFDLHRIERLHQAWERRLLANAGEPISKRMSPEGCNAS" misc_feature complement(<2541239..2544373) /gene="ambB" /locus_tag="PA2305" /note="peptide synthase; Provisional; Region: PRK12467" /db_xref="CDD:237108" misc_feature complement(2542784..2544226) /gene="ambB" /locus_tag="PA2305" /note="The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae; Region: A_NRPS_Sfm_like; cd12115" /db_xref="CDD:341280" misc_feature complement(order(2543759..2543764,2543768..2543785, 2543792..2543794)) /gene="ambB" /locus_tag="PA2305" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341280" misc_feature complement(order(2542802..2542804,2543069..2543071, 2543078..2543080,2543114..2543116,2543306..2543308, 2543375..2543392,2543453..2543458,2543780..2543785)) /gene="ambB" /locus_tag="PA2305" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341280" protein_bind complement(2545014..2545029) /experiment="ChIP-chip [PMID: 19682264]" /experiment="ChIP-PCR [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA2304, PA2305, PA2302, PA2303'" /bound_moiety="LasR" gene complement(2545042..2545659) /gene="ambA" /locus_tag="PA2306" /db_xref="GeneID:878461" CDS complement(2545042..2545659) /gene="ambA" /locus_tag="PA2306" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein AmbA" /protein_id="NP_250996.1" /db_xref="GeneID:878461" /translation="MSLSVDLLLAFSLFAFVTSVTPGPNNTMLLASGVNFGFVRSIPH ILGISCGFFIMVMAVGFGLGTVFEAYPVLYTILRYVGAAYLLYLAWKIATSGPAGNDP EGRGKPLSYWGAAAFQWVNPKAWVMAVGAISTYTPLQGYFTNVVVISTVFALINAPTI GIWAGFGSMLRNVLRDPRWLRVFNVGMALLLVASLYPILAESHSA" misc_feature complement(2545051..2545653) /gene="ambA" /locus_tag="PA2306" /note="Threonine/homoserine/homoserine lactone efflux protein [Amino acid transport and metabolism]; Region: RhtB; COG1280" /db_xref="CDD:440891" gene complement(2545769..2546635) /locus_tag="PA2307" /db_xref="GeneID:880804" CDS complement(2545769..2546635) /locus_tag="PA2307" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_250997.1" /db_xref="GeneID:880804" /translation="MSRVTRVREEYEVQLEPLLEVSLERRLPLSQRLWQQSWLRKGLI LALLALAWELAARVQGNDLLLPGFLQTARALGEGLASGELPAKAGISLLVLFKGYLLG IVLAFVLTSLAVSTQLGRDLLGTLTAMFNPLPAIALLPLALLWFGLGQNSLIFVLVHS VLWALALNTYAGFLGVSETLRMAGRNYGLRGLRFVLLILVPAALPSILAGLKIGWAFA WRTLIAAELVFGASSGKGGLGWYIFQNRNELYTDKVFAGLAVVVLIGLLVENLVFGSI ERLTVKRWGVQR" misc_feature complement(2545784..2546455) /locus_tag="PA2307" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]; Region: TauC; COG0600" /db_xref="CDD:440365" gene complement(2546652..2547500) /locus_tag="PA2308" /db_xref="GeneID:879423" CDS complement(2546652..2547500) /locus_tag="PA2308" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_250998.1" /db_xref="GeneID:879423" /translation="MNAASRQPSTLPADALLAVDGVSLEYRTRSRVVRATQRVSFEVD PADRFVLLGPSGCGKSTLLKAVAGFITPSEGEIRLQGQAVRAPGPDRIVVFQEFDQLP PWKTVRQNVLFPLRVSGQVTRDEAERRADECLEKVGLAGFAEAYPHTLSGGMKARVAI ARALAMQPKILLMDEPFAALDALTRRKMQEELLRLWEEVRFTLLFVTHSIEEALVVGN RILLLSPHPGRVRAEVHGHPFGLHSLGGEPLQAAARRIHRLLFDEGGEPTAAATLDFA DIRLAH" misc_feature complement(2546700..2547467) /locus_tag="PA2308" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]; Region: TauB; COG1116" /db_xref="CDD:440733" gene complement(2547508..2548530) /locus_tag="PA2309" /db_xref="GeneID:881973" CDS complement(2547508..2548530) /locus_tag="PA2309" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_250999.1" /db_xref="GeneID:881973" /translation="MNRIPRFTRLVAALGLGLSLATTLLASRPAQAEGEIRIAEQFGI VYLLLNVVRDQRLIEKHGQAEGLQIKVDWTQLSGGAAVNDALLSGAIDIAGAGVGPLL TIWDRTRGRQNVKAVASLGNFPYYLLSNDPRVRSIADFGAGDRIAVPAVGVSVQSRFL QYAAAKQWGDKQFDRLDKYTVALPHPDATAALVAGGTELTGHFSNPPFQDQALANPKV HVVLDSYELLGPNSPTVLFATEKFRQDNPKTYRAFVEALKEAAAFAQNDKAAAADTYI RVTGAKIDRAALLKIIANPQVEFSVTPKNTYPLAEFLYRVGAIRNKPASWQDYFFQDG APLQGS" misc_feature complement(2547562..2548494) /locus_tag="PA2309" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: TauA; COG0715" /db_xref="CDD:440479" gene complement(2548571..2549458) /locus_tag="PA2310" /db_xref="GeneID:879530" CDS complement(2548571..2549458) /locus_tag="PA2310" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251000.1" /db_xref="GeneID:879530" /translation="MSVSLPAPARADVPLQIRALDAAFGAEVLGLDLGLPLAAEDFRR IHRAHLDHHVLVFREQRITPAQQIAFSRRFGELQIHVLKQFLLPGHPEILIVSNIVEN GQPIGLGDAGKFWHSDLSYKELPSLGSMLHAQELPEEGGDTLFADMHKAWDSLPEALR KAIEGRTAAHSYTARYSEPRFEGNWRPTLSAAQLAEVREVVHPIVRTHPESGRKALFV SEGFTTRIVGLPADESAQLLAELYAHSVRPEHIYRHRWQAHDLVFWDNRSLIHLAGGC PAHLRRKLYRTTIQGDAPF" misc_feature complement(2548577..2549419) /locus_tag="PA2310" /note="Taurine dioxygenase, alpha-ketoglutarate-dependent [Secondary metabolites biosynthesis, transport and catabolism]; Region: TauD; COG2175" /db_xref="CDD:441778" gene 2549748..2549906 /locus_tag="PA2311" /db_xref="GeneID:879714" CDS 2549748..2549906 /locus_tag="PA2311" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251001.1" /db_xref="GeneID:879714" /translation="MDRTDNVIDFARYRSRRQARRLGEMMWAVYAWRAGYAVPQPPAR HDERSRRA" gene 2549961..2550542 /locus_tag="PA2312" /db_xref="GeneID:881991" CDS 2549961..2550542 /locus_tag="PA2312" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251002.1" /db_xref="GeneID:881991" /translation="MHTEPDDLIGQRVAHNLLRLRGKRNLSLDALARISGVSRAMLAQ IESGRSVPSIKVLCKIAQGLKVSVAAFLDDRAFAGVAVLPAQQSKRLVSADGAFTSRA LFPFDVARQVEFYELRLRGLGQEDAEAHAPGTQENLVVAQGVLEVRVNEERFLLATGD SILFYADQPHSYRNPADSEALAYLVMTYPERLD" misc_feature 2549985..2550182 /locus_tag="PA2312" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" misc_feature 2550252..2550521 /locus_tag="PA2312" /note="XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain; Region: cupin_XRE_C; cd02209" /db_xref="CDD:380339" misc_feature order(2550258..2550260,2550303..2550305,2550309..2550311, 2550345..2550347,2550354..2550356,2550366..2550368, 2550468..2550470,2550474..2550476,2550510..2550512) /locus_tag="PA2312" /note="putative active site [active]" /db_xref="CDD:380339" gene complement(2550619..2551122) /locus_tag="PA2312a" /db_xref="GeneID:17373362" CDS complement(2550619..2551122) /locus_tag="PA2312a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719754.1" /db_xref="GeneID:17373362" /translation="MMNAMQMPMNMNAAMPMMPMMGMPMMMATMQCETMDDGMLCKMM PAMGMDMGQFRNSAEMMAMMMNCGMPMMMQCGNLAMMGMSQACMAMMPTMGMGMGMPM MGMAPMKCMMECSMQGDAMHCRMMPMQGMDMEMFKNCCMLMAKMMECGMPMMMSCNGM PMMCCTC" protein_bind 2550932..2550944 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2313" /bound_moiety="AmrZ" protein_bind 2550980..2550992 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2313" /bound_moiety="AmrZ" gene complement(2551422..2552675) /locus_tag="PA2314" /db_xref="GeneID:883017" CDS complement(2551422..2552675) /locus_tag="PA2314" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_251004.1" /db_xref="GeneID:883017" /translation="MGRREAFPENAGAAASAVAPRLPLSALLAMAMSGFVAILSETLP AGLLPQIGAGLAVSEALAGQLVSVYALGSLLAALPAASLTQGWRRRRVLLLALLIFFV CNSFTAVSSDYRLTLLARFGSGVAAGLAWGLLAGYARRLVPPEQQGRALAVAMLGAPL ALSLGVPLGTWLGGLLGWRWAFGLLSLTALLLVGWVLRSVPDFPGQPAGRRLRLLGVL RTPGVRPVLLVIVAWVLAHNILYTYIAPFLAKVGLGASVDLALLVFGSAAVAGIWLVG VLVDRHLRRMVLASLALFAVAALALCLGARWSWLAFAGLALWGLTFGGAATLLQTASA DAAGEGADLAQSMIVVAWNLAIAGGGALGGMVLQRWGSEMLPWTLLPLIGLAAVLVWG NAAHAFRVGPRDFRRASSEHRKAAQ" misc_feature complement(2551503..2552597) /locus_tag="PA2314" /note="Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; Region: MFS_NepI_like; cd17324" /db_xref="CDD:340882" misc_feature complement(order(2551608..2551610,2551617..2551622, 2551629..2551634,2551641..2551643,2551686..2551688, 2551698..2551700,2551710..2551715,2551860..2551862, 2551872..2551874,2551950..2551952,2551959..2551967, 2551974..2551979,2551986..2551988,2552190..2552192, 2552199..2552204,2552211..2552213,2552271..2552273, 2552280..2552288,2552292..2552297,2552445..2552447, 2552541..2552543,2552550..2552555,2552562..2552567)) /locus_tag="PA2314" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340882" gene complement(2552675..2553850) /locus_tag="PA2315" /db_xref="GeneID:883042" CDS complement(2552675..2553850) /locus_tag="PA2315" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251005.1" /db_xref="GeneID:883042" /translation="MSSFEREPGCGLAENVDQVIEAAFADQRLVGAVVLVAHRGQWLY RRAAGLADREAGRIMGEDSLFRLASVSKPIVSVAALSLVDEGRLALDEPIADWLPAFR PRLADGREARITPRQLLSHSAGLGYRFLEADADGPYARAGISDGMDLPGFDLAENLRR LASVPLLYEPGRAWGYSLATDVLGALVERVDGRPLAEALRQRVGIPAGMRDSGFLCAD AQRLAAVYVSDRPRPRRMAERETVTPFEDCVGIRFEPRRAFEPSAYASGGAGMIGSAG DVLRLLEVLRQGGAPLLTPGLVEEMGRDQLPGLELPANPGFGFGLGFSVLRDPAIAQS PESPGTWRWGGAYGHSWFVDRARELSVVALTNTLFEGMSGRFVNDLRDAVYRSAEVR" misc_feature complement(2552684..2553850) /locus_tag="PA2315" /note="CubicO group peptidase, beta-lactamase class C family [Defense mechanisms]; Region: AmpC; COG1680" /db_xref="CDD:441286" gene 2553965..2554858 /locus_tag="PA2316" /db_xref="GeneID:883052" CDS 2553965..2554858 /locus_tag="PA2316" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251006.1" /db_xref="GeneID:883052" /translation="MDSLSGFTVFVRVAETRSIVGAARTLGVSASAVGKRVARLEEKL GVRLFHRSTRSITLTAEGSLFLERSRRILAEIEATELELSQSRETPRGRLRVSLPLVS GLVLPTLADFMQAYPDIELDLDFSDRVVDVVDEGFDVVLRTGQPVDSRLSMRELGEFQ LKLVGSPAYFARHGTPRCPEDLLRHTCLHYRFPNTGRLEEWPLRRADGEAPPQIPVSM VCNNIETRVCFALRDQGIACLPDFSIREALREGRLVSVLDAFCERRAQFFLLWPSGRQ VSPKLRAFIDFVAPRVIATLG" misc_feature 2553989..2554150 /locus_tag="PA2316" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 2554238..2554828 /locus_tag="PA2316" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold; Region: PBP2_CrgA_like_7; cd08476" /db_xref="CDD:176165" misc_feature order(2554262..2554264,2554274..2554276,2554391..2554393, 2554433..2554435,2554439..2554441,2554631..2554633, 2554682..2554684,2554763..2554765) /locus_tag="PA2316" /note="putative effector binding pocket [active]" /db_xref="CDD:176165" misc_feature order(2554265..2554270,2554280..2554285,2554289..2554294, 2554301..2554303,2554313..2554315,2554319..2554339, 2554520..2554522,2554613..2554627,2554646..2554651, 2554658..2554660) /locus_tag="PA2316" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176165" gene 2554962..2556260 /locus_tag="PA2317" /db_xref="GeneID:883103" CDS 2554962..2556260 /locus_tag="PA2317" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_251007.1" /db_xref="GeneID:883103" /translation="MINIETPTYYTATKKYELSFPSLETDLDADVVVIGGGFSGINTA LELAEHGITDIVVLEARHLGFGGTGRNGGQIMAGIGHDLEKIRKDVGEDGLRAIFEIS DLGADIIKGRIEKYAIDADFCHGYGYMGFNARQAKTLQAWEKEFRSLGSPHEIRYLHG AEVRQIIGSDAYGSALLHMGGGHVHSLNLLLGEAKALAGLGARIFEYSPALEVQYGER IRVRTAKGSVTANKLLWACDSFLNRLEPELHRTTINTYAFQMMTEPLPDELIQRISPI RGAYSDIRPVIDYYRVTNENRLLFGAATPFVERIPGDLKAWNRKLMLKIFPYLEHVRI DLAWGGPMACSANLFPQIGSLSGRPNAFFVQGYSGFGVTPSHIVCKVLAEGMSEGSAR YDLLSSVRRIPIHGKDHFRPLLLSAGKTWHQLSGYWNGRR" misc_feature 2555043..2556146 /locus_tag="PA2317" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" gene 2556293..2556658 /locus_tag="PA2318" /db_xref="GeneID:883113" CDS 2556293..2556658 /locus_tag="PA2318" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251008.1" /db_xref="GeneID:883113" /translation="MAITVIRHGITLDELDAWGSVADLGSEILEGEVKAFGKMTAGAP TDPVSAAYFGTTAGKFRMTYPFSEQATVVSGEVRLTDESTGQSTLYKAGDSWFVSKGT PVLWEVADGGFVKHYYAVA" misc_feature 2556350..2556643 /locus_tag="PA2318" /note="Predicted enzyme of the cupin superfamily [General function prediction only]; Region: COG3450" /db_xref="CDD:442673" gene 2556948..2557964 /locus_tag="PA2319" /db_xref="GeneID:881905" CDS 2556948..2557964 /locus_tag="PA2319" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_251009.1" /db_xref="GeneID:881905" /translation="MNLSRIGLDLAKQVFQVHGVDRHEHVVCRRQLKRAQVRDFFRQL PPCLVAMEACGSAHYWARELRELGHTVRLIAPQFVKPYVKGDKHDAHDAEAICEAASR PSMRYVPVKSAEQQAVQSMHRVRSRLVRARTALCNEVRGLLGEFGLIATRRGRAATMA LLETVMATEPAPLPAPMGELLRELKDELQTLEARIARLERQIQAHVRGDARIQRLLAV EGIGPISASAVAASAGDARQFRTGRQFAAWLGLVPRQHSTGGQQRLGNISKRGDTYLR TLLIHGARAVVRCCANKTDARSRWLQGLLQRRPANVVAVALANKNARILWALLSRETC YRPG" misc_feature 2556963..2557946 /locus_tag="PA2319" /note="IS110 family transposase; Region: transpos_IS110; NF033542" /db_xref="CDD:468073" gene complement(2558918..2559949) /gene="gntR" /locus_tag="PA2320" /db_xref="GeneID:883124" CDS complement(2558918..2559949) /gene="gntR" /locus_tag="PA2320" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="NP_251010.1" /db_xref="GeneID:883124" /translation="MSITKNDKNTRTTGRPTLNEVARRAGVSPITASRALRGVASVAE ELAQKVRDAARELGYVANPAARALASAQSHSVAVLVPSLANLLFIETLEAIHAVLRPQ GLEVLIGNFHYSRNEEEDLIRNYLAYQPRGLLLTGFERTESARRMIEASGIPCVYMMD LDSGSGLNCVGFSQLRAGEAAAEHLLARGRRRLAYIGAQLDQRTLLRGEGFRRALQKA GCYDPGLEILTPRPSSVALGGELFVQLLASQPQVDGVFFCNDDLAQGALLEALRRGVK VPEQIAVLGFNDLPGSDCTVPRLSSIRTPREAIGRRAAEQLLALIAGKEVRDSALDMG FELMAREST" misc_feature complement(2559695..2559904) /gene="gntR" /locus_tag="PA2320" /note="helix_turn _helix lactose operon repressor; Region: HTH_LACI; smart00354" /db_xref="CDD:197675" misc_feature complement(order(2559743..2559748,2559752..2559757, 2559764..2559766,2559773..2559775,2559812..2559814, 2559821..2559826,2559839..2559841,2559848..2559853, 2559857..2559871)) /gene="gntR" /locus_tag="PA2320" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143331" misc_feature complement(2559746..2559775) /gene="gntR" /locus_tag="PA2320" /note="domain linker motif [active]" /db_xref="CDD:143331" misc_feature complement(2558924..2559724) /gene="gntR" /locus_tag="PA2320" /note="ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators; Region: PBP1_GntR; cd01575" /db_xref="CDD:380489" misc_feature complement(order(2559146..2559148,2559233..2559235, 2559242..2559244,2559248..2559250,2559566..2559571, 2559575..2559580,2559587..2559589,2559626..2559637, 2559662..2559664,2559674..2559676,2559683..2559685, 2559701..2559703)) /gene="gntR" /locus_tag="PA2320" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:380489" misc_feature complement(order(2559038..2559040,2559089..2559091, 2559251..2559253,2559329..2559331,2559434..2559436, 2559473..2559475,2559542..2559544,2559677..2559679, 2559686..2559691)) /gene="gntR" /locus_tag="PA2320" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:380489" gene 2560144..2560665 /locus_tag="PA2321" /db_xref="GeneID:881898" CDS 2560144..2560665 /locus_tag="PA2321" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="gluconokinase" /protein_id="NP_251011.1" /db_xref="GeneID:881898" /translation="MHPPLQALVIMGVAGCGKSSVSQALCQRSGAHGIEGDSFHPAAN IRKMSAGIPLTDDDRAGWLDTLAEQLRQAVAAGKLPVLTCSALKRAYRDRLRRAVPGL GIVYLELTPAVAAERVAQRPGHFMPATLIDSQFAALEPPLDEPLTLRLDATLPVECLA QAAHAWWLEHAAA" misc_feature 2560165..2560650 /locus_tag="PA2321" /note="carbohydrate kinase, thermoresistant glucokinase family; Region: therm_gnt_kin; TIGR01313" /db_xref="CDD:273551" misc_feature order(2560177..2560200,2560246..2560248,2560252..2560254, 2560492..2560494,2560504..2560506) /locus_tag="PA2321" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:238979" misc_feature order(2560183..2560188,2560504..2560506) /locus_tag="PA2321" /note="Gluconate-6-phosphate binding site [chemical binding]; other site" /db_xref="CDD:238979" gene 2560762..2562114 /locus_tag="PA2322" /db_xref="GeneID:883019" CDS 2560762..2562114 /locus_tag="PA2322" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="gluconate permease" /protein_id="NP_251012.1" /db_xref="GeneID:883019" /translation="MFGMSHDAYLLLDALVTIIGLIVLITRFKVHPFIALIIAAGFLG LTSGMPVEKIVKSFQDGFGGVLGFVGVILALGTMLGKLMADSGGADQIARTLIRAFGK ERVHWSMMLAAFLVGIPLFFEIGFILLIPLVFIVARRSGVSLIKIGIPLLAGLSAVHG LVPPHPGPLLAIGVFGADIGKTILYGLIVALPTAAIAGPLFGALVSRYIPGTPSAELV EQIAHEPETQDLPSFGVTLATVLLPVFLMLLKTFADVAFPDGHAFRAWMDMIGHPISA LLLALLVALYTFGYARGFDSKKILRLLDQSLAPTAAIVMIIGAGGGFKQMLVASGVGD VIGHLAVNAQISPILLAWLVAAVIRIATGSATVATITGAGIVVPVIDLIPGVNRELLV LATGAGSLILSHVNDAGFWLVKQYFNMSVSETFKTWTAMETILSVVGLVFILLLSLVL " misc_feature 2560786..2562108 /locus_tag="PA2322" /note="GntP family permease; Region: GntP_permease; pfam02447" /db_xref="CDD:308194" gene 2562447..2564072 /locus_tag="PA2323" /db_xref="GeneID:883046" CDS 2562447..2564072 /locus_tag="PA2323" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase" /protein_id="NP_251013.1" /db_xref="GeneID:883046" /translation="MTAPLHLDSLFPSLDAIPEQYRPDAPIEQRDYLVDGQLRHWDGP LAPVRSPVFLAEADGERQVILGSTPLLDADAALAALDAAVRAYDHGQGLWPNLRVAER IQHVERFLARMREQREAVVKLLMWEIGKNLKDSEKEFDRTCDYIVDTIEALKELDRHS SRFELEQGTLGQIRRVPLGVALCMGPYNYPLNETFTTLIPALIMGNTVVFKPAKFGVL LIRPLLEAFRDSFPPGVINVIYGRGRETVSALMASGKVDVFAFIGTHSGASDLKKLHP RPHRLRAALGLDAKNPGIVLPQVDLDNAVNEAVTGALSFNGQRCTALKILFVHESVLR PFLDKFSARLASLKPGMPWEPGVALTPLPEPGKVDYLEGLLNDALAKGARVVNAGGGE HRQSFFYPALLSPVSPDMRLYHEEQFGPLVPVVPYRELDEVIDYVLRSDYGQQLSLFG NDPAQIGRLVDAFANQVGRINVNAQCQRGPDSYPFNGRKNSAEGTLSVHDALRVFSIR TLVATRDTEANKTLVSEIIRNRASNFLTTDYIF" misc_feature 2562531..2563988 /locus_tag="PA2323" /note="NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11; Region: ALDH_F11_NP-GAPDH; cd07082" /db_xref="CDD:143401" misc_feature order(2562726..2562731,2562738..2562746,2562888..2562890, 2562897..2562902,2562906..2562911,2562918..2562932, 2562936..2562938,2562966..2562968,2562972..2562974, 2563260..2563262,2563275..2563277,2563305..2563307, 2563797..2563799,2563803..2563811,2563815..2563820, 2563824..2563829,2563833..2563835,2563845..2563862, 2563866..2563868,2563887..2563892,2563896..2563898, 2563902..2563904,2563920..2563922,2563941..2563946, 2563965..2563967,2563971..2563988) /locus_tag="PA2323" /note="tetrameric interface [polypeptide binding]; other site" /db_xref="CDD:143401" misc_feature order(2562729..2562731,2562750..2562752,2562966..2562971) /locus_tag="PA2323" /note="activator binding site [active]" /db_xref="CDD:143401" misc_feature order(2562996..2563007,2563077..2563079,2563083..2563088, 2563173..2563175,2563188..2563190,2563227..2563229, 2563233..2563238,2563245..2563247,2563692..2563694) /locus_tag="PA2323" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:143401" misc_feature order(2563008..2563013,2563401..2563409,2563878..2563883) /locus_tag="PA2323" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:143401" misc_feature order(2563008..2563010,2563302..2563304,2563395..2563397, 2563404..2563406) /locus_tag="PA2323" /note="catalytic residues [active]" /db_xref="CDD:143401" gene 2564290..2565549 /locus_tag="PA2324" /db_xref="GeneID:883048" CDS 2564290..2565549 /locus_tag="PA2324" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251014.1" /db_xref="GeneID:883048" /translation="MNARVHPEATATSLSEGADYELLAQRFRPIFARIAEGAVERERQ RELPHEAIAWLKQAGFGAVRVPREHGGAGASLPQLVQLLIELAEADSNITQALRGHFA FVEDRLNAEPGPGRDRWLRRFVEGDLVGCAWTEVGSVRLGEVLTRVSRKDDGRWVVNG SKYYSTGSLFSDWIDLYAQRDDTGADVIAAIRTDQPGVRQSDDWDGFGQRTTGSGTSL FEDAEVEEENLIDFASRFKYQTAFYQLVLLAVLAGTGRAALRDVAAEVRGRTRIYSHG NAPRVSQDPQVQQVVGRIAARVYAAEAATLCAAEAAQRAYLARFVGDPQAEKEANIAA EIESAKAQAIVAELVLQATSELFDASGASAVGRGKQLDRHWRNARTAASHNPLIYKQR IVGDWEINGSEPPYVWQIGSGPATASR" misc_feature 2564362..2565501 /locus_tag="PA2324" /note="Dibenzothiophene (DBT) desulfurization enzyme C; Region: DszC; cd01163" /db_xref="CDD:173852" misc_feature order(2564779..2564781,2564785..2564787) /locus_tag="PA2324" /note="Flavin binding site [chemical binding]; other site" /db_xref="CDD:173852" gene 2565580..2566815 /locus_tag="PA2325" /db_xref="GeneID:883054" CDS 2565580..2566815 /locus_tag="PA2325" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251015.1" /db_xref="GeneID:883054" /translation="MSALEKNAADPYRQPLPRTPARRIADDAEAIRVARELAGLFAEE ASLRDRQRRLPVAELEAFSQSGLWGISVPRAYGGAEVGYRTLAEVLKTIAAVDPSLAQ LPQNHLAVLDHLRLDGSEEQKRFFYGLVLDGVRFGNAFSERHSRTVAEFQTRVLADGD GFRIDGRKFYSSGALLAHWVPAVGLDAEQRAHLAFIPRDAPGLTVIDDWSGFGQRTTA SGTVILDNVRVPAEHVIPVHRAFDRPTAAGAVSQFIQAAIDAGIARGILAETVQQVRR HARPWIDANQQHAWEDPYTIQQVGDLRIRVRAAEAVLDLAADAIEAALAAPDEESVAA ASIAVAEAKVLTTEAALLAANRLFELAGTRSTLEELNLDRHWRNARTHTLHDPVRWKY HAIGNYQLNGVKPPRHAWL" misc_feature 2565640..2566812 /locus_tag="PA2325" /note="sulfur acquisition oxidoreductase, SfnB family; Region: sulfur_SfnB; TIGR04022" /db_xref="CDD:274924" gene complement(2566875..2568284) /locus_tag="PA2326" /db_xref="GeneID:883056" CDS complement(2566875..2568284) /locus_tag="PA2326" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251016.1" /db_xref="GeneID:883056" /translation="MPREIRLNAFEMNCVGHQSPGLWAHPRDRSSQYKDLEYWTDLAR LLERGRFDGLFIADVLGIYDVLDGNGDAAIRQAAQVPVNDPLALITPMAAVTRHLGFG LTASLSFEHPYPFARRLSTLDHLTKGRIGWNVVTSYLESGARNLGQQAQLDHDRRYDY ADEYLQVLYKLFEGSWEDGAVLRDRRRRIFSDPGKIHEIRHVGEHFQVPGIHLCEPSP QRTPVLYQAGASSRGKRFAAEHAECVFVAAPSKTVLKQAVADIRQRVAEAGRDPRKVL VFNLQTVVLGETDAKARAKFDEYRAFVSYEGALALISGWTGIDFGQYRPDQVLRHIHT NAIQSAVEAFSSADPTRTWTVRELADWVGIGGFGPLFVGSPATVADLLQEWVEDTDVD GFNLAYALAHETFSDVVELLVPELQKRGVYKTEYAPGTLREKLFGDGPRLPDSHPAAG YRDLRALWEKEAGRNALPA" misc_feature complement(2566983..2568266) /locus_tag="PA2326" /note="FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; Region: FMN_nitrolo; TIGR03860" /db_xref="CDD:274819" gene complement(2568929..2569693) /locus_tag="PA2327" /db_xref="GeneID:883075" CDS complement(2568929..2569693) /locus_tag="PA2327" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_251017.1" /db_xref="GeneID:883075" /translation="MRQTLRQGALGVAGLLTLFALWWLGVALFGAADGLSARFSPQAT LLSLGELLERRELYEHVLVSLKRVLLGLFLALLVGVPLGLLVGASRNLEAATTPAFQF LRMISPLSWMPIAVMLMGVGDQPIYFLLAFAALWPILLNTAAGVRQLDPRWLQLSRSL AATPWETLRRVILPGILGHVLTGVRLAIGILWIVLVPCEMLGVSAGLGYYILDTRDRL AYSELMAMVLLIGLLGYLLDAAARGLYRRWAHGALG" misc_feature complement(2568950..2569690) /locus_tag="PA2327" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]; Region: TauC; COG0600" /db_xref="CDD:440365" gene complement(2569690..2570889) /locus_tag="PA2328" /db_xref="GeneID:881900" CDS complement(2569690..2570889) /locus_tag="PA2328" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251018.1" /db_xref="GeneID:881900" /translation="MCLDDPTHSRRDILKLAALLSAAGALPLLSSLQARAAAEPDAPV RIGYLPITDATPLLVAHANGLFEAEGIQAERPVLLRSWAQVIEAFISGQVNVIHLLSP MTVWARYGSKVPAKVVAWNHVGGSGLTVAPEIADVRQLGGKSVAIPFWYSIHNVVLQQ LLRDNGLRAVSRAVGAALAADEVNLVVLPPSDMPPALASKRIHGYIVAEPFNALAENL KVGRVQRFTGDVWRNHACCVVFMHEHDLERRPQWSQKVVNAIVKAQLWTREHRAEAAQ LLSKAGANRYTPHAPEVLGRVLAPGAEEQQAYLASGAIRHADWQERRIDFQPYPYPSY TEELVRRLKDTLIEGNNAFLASLDPRQVASDLVDDRFVRQALAEVGGLQAFGLAEGFQ RSEEISP" misc_feature complement(2570101..2570763) /locus_tag="PA2328" /note="Substrate binding domain of ABC-type nitrate/bicarbonate transporters, a member of the type 2 periplasmic binding fold superfamily; Region: PBP2_NrtA_CpmA_like; cd13553" /db_xref="CDD:270271" misc_feature complement(order(2570179..2570181,2570257..2570259, 2570266..2570271,2570320..2570322,2570428..2570430, 2570446..2570448,2570512..2570514,2570644..2570646, 2570737..2570742)) /locus_tag="PA2328" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270271" gene complement(2570855..2571691) /locus_tag="PA2329" /db_xref="GeneID:883116" CDS complement(2570855..2571691) /locus_tag="PA2329" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_251019.1" /db_xref="GeneID:883116" /translation="MSEALLDARGIALGYPRGAGWQAVLGDFELRLGAGEVVSILGPS GVGKSSLLRVLAGLQEPAAGSVRVLGEPLRGPHPGVAVAFQDPSLLPWLNLEKNVAFG LDFARQPHLDAATRQARVDQAIAAVGLEHARARYPAQLSGGMAQRTALARCLARQPKV LLLDEPFGALDEVTRADMQQLLLRAIHERGTAVVLITHDIDEALLLSERILLLGDSPA RTLGEWRIDLPQPRAELVEELGALRIEILKTLRRASRTHAHPIAQPEASHVPGRPDPF PT" misc_feature complement(2570918..2571691) /locus_tag="PA2329" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]; Region: TauB; COG1116" /db_xref="CDD:440733" gene complement(2571688..2572755) /locus_tag="PA2330" /db_xref="GeneID:883026" CDS complement(2571688..2572755) /locus_tag="PA2330" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251020.1" /db_xref="GeneID:883026" /translation="MLDPTLSDWLDRQADALDRGDADPAALLPRLAAAGVLGVAVEER LGGAGGTLADAVERVAAVAARSLTAAFVFWGQRAFIEYLLQSPNQELRQRLLGDLLAG RLAGATGLSNAMKFLSGIEALQVVAHAEEAGWRLDGRLPWVTNLRSGDFVVAAAIEHG EGGKPFVLAIPEGLAGLQRSADLRLLGLQCSNTAALDLRAVAVGRDWLLHDDARQFLP RVRPAFLGLQCGMAIGLARRALDEVQRHLGGSRSLLDGELAAQRETLDGHVAALHAGL ASGEFASQPARLFRIRIGLAEAAANAVQLELQASGGKAYLSEHGAGFARRWRESAFVP IVTPSLVQLRAELQRQAEAKA" misc_feature complement(2571772..2572653) /locus_tag="PA2330" /note="Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]; Region: CaiA; COG1960" /db_xref="CDD:441563" gene complement(2572805..2573365) /locus_tag="PA2331" /db_xref="GeneID:881926" CDS complement(2572805..2573365) /locus_tag="PA2331" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251021.1" /db_xref="GeneID:881926" /translation="MSRVPVLTLENAPEAARPFLQTALNNSGYIPNLLGVLANAPAAL ETYLTVSGLNAKASLGLPEREVVQLVAATTHGCDFCVAGHTAVARNKARLPEPVIEAL RARGELPDARYEALADFTRAVIASRGAVTDEQFEAFRAAGFDQAQALEVILGVSLATL CNFANVFARTPLNAELEQYRWTNPQA" misc_feature complement(2572838..2573248) /locus_tag="PA2331" /note="Alkylhydroperoxidase family enzyme, contains CxxC motif [Inorganic ion transport and metabolism]; Region: YciW; COG2128" /db_xref="CDD:441731" gene 2573470..2574375 /locus_tag="PA2332" /db_xref="GeneID:881948" CDS 2573470..2574375 /locus_tag="PA2332" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251022.1" /db_xref="GeneID:881948" /translation="MNSSNPLVDWLLDSLEVDTSLFHVGRYCGGWHASTHGLARASFH LVVQGHCWAHVAGSARGWRLDSGDALFFLRDVEFRLSSEATAEAARCQPRGEMQALEW NAADGAGLVCGFFHFHSGLSGLIVDALPDWLILRAGDPALDAARRLFALIVDECRRQP APSPVLLERLSHLLFLYVLRQQVLDNPTLGGLVALARQPQFAGLLEALIEAPEQPWSL EQMAERTGLSRSAFFKRFNELSGQSPGQVLLALRMHRACALLRADASVAEVAAAVGYQ STAAFTRAFHKATGQQPGAYRKASR" misc_feature 2573500..2574018 /locus_tag="PA2332" /note="Region: Cupin_6; pfam12852" /db_xref="CDD:432833" misc_feature 2574112..2574360 /locus_tag="PA2332" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene complement(2574376..2575992) /locus_tag="PA2333" /db_xref="GeneID:883030" CDS complement(2574376..2575992) /locus_tag="PA2333" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sulfatase" /protein_id="NP_251023.1" /db_xref="GeneID:883030" /translation="MSQPKPIRNVLYIMCDQLRRDYLSCYGHPYLHTPNIDRLAAEGV RFARAYTQGTICGPSRMSSYTGRYVSSHQVAWNAVPLPLEELTLGDYLRAAGVRTALV GKTHATANLEGMRRLGIDPASARGAALAEAGFEPYDRNDGVYPDDPAFADKRERAPYT HYLRRLGFTGDNPWHDWANAAAGADGEILSGWRMRHAGLPTRLPEAHSETAYTTRRAM DFIDEQGERPWCLHLSYIKPHWPYIAPAPYHALYRADQVLPALRAAPGEESDHPVYRA FREHRESLNFSREDVRRQVIPTYMGLIRQVDDQLGRLFQHMRASGRWDDTLIVFTSDH GDFLGDHGLGEKEFLLESAVGVPLLIRDPRPEADATRGRVEEALVQSIDVLPSILEAF AVEPASHRIEGRSLLPFVHGAPPADWRRYAIAEYDYAFQAPARERLGRPIDACRMYMV RSERWKYIAYDGFRAQLFDLASDPGELRDLGADPAHAAVREAHAGMLFDWLRGLKRRT TISNAEIDLRGQAFRYGEPEGGRLVPIGLW" misc_feature complement(2574472..2575971) /locus_tag="PA2333" /note="Phosphonate monoester hydrolase/phosphodiesterase; Region: PMH; cd16028" /db_xref="CDD:293752" misc_feature complement(order(2574991..2574996,2575276..2575278, 2575675..2575677,2575681..2575683,2575825..2575827, 2575942..2575947)) /locus_tag="PA2333" /note="putative active site [active]" /db_xref="CDD:293752" misc_feature complement(order(2574991..2574993,2575276..2575278, 2575675..2575677,2575681..2575683,2575825..2575827, 2575942..2575947)) /locus_tag="PA2333" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:293752" misc_feature complement(order(2574484..2574492,2574496..2574504, 2574523..2574525,2574529..2574531,2574616..2574618, 2574622..2574624,2575312..2575314,2575324..2575329, 2575336..2575341,2575345..2575347,2575699..2575716, 2575774..2575776)) /locus_tag="PA2333" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:293752" protein_bind complement(2574723..2574735) /locus_tag="PA2333" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(2576089..2577000) /locus_tag="PA2334" /db_xref="GeneID:883067" CDS complement(2576089..2577000) /locus_tag="PA2334" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251024.1" /db_xref="GeneID:883067" /translation="MHIDLRQLRHFIALHEHRSFVAAALAVNLSQSAFSRSIQALEHS AGCRLVDRAAKDLRPTKQGLIVLEHARRLVSGAHNLANEIALFNGLEAGELRFGAGPA PATWLVPRAVGRFNVRYPKARVSFQVEHWQALNRRLQAEEFEFFVADTRHFEADPQYR TSRLRPRRWHFCCREGHPLAARESVSAEELLSFPLATNISPPNIRKVLVDLSGRPDFR PAIECENGHSLLGVVLASDAIGISSGLGDLAPPGQGGLRPLRVRELPDDLDELHTRYG IVSRAGYSLSPLAEAMIDELKRVDDAT" misc_feature complement(2576107..2576994) /locus_tag="PA2334" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 2577150..2579519 /locus_tag="PA2335" /db_xref="GeneID:881961" CDS 2577150..2579519 /locus_tag="PA2335" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="TonB-dependent receptor" /protein_id="NP_251025.1" /db_xref="GeneID:881961" /translation="MNRRPAYRSIPSSRSAPFRRRLLPLSICLACAGGAQLAGADDTP AGTEEARQAQPATTLQTVTVTSRRRVENSQDVPTAMSVLGGETLESQRIYRVQDLQQL VPSTNVAYVHARQSSVSIRGLGNNPASDGLEGSVGLYLDNVYLGRPGMASFDLLDIEQ LEVLRGPQGTLFGKNTTAGVINIGTRAPSFTPERSVEISGGEDGYFQARGTISGPLGE TLAGRLSAYRTRDDGYVKNLHDGNTLNGGARQGFRGQLLFKPNDDFSLRWIGDYNEED SDNGVLTLFSSGPTVNGVNRYEQRAAAAGATLVDGHRRKVNFDSDQQVTVFQGGTSVE ANWKLANDFTLTSISAYRWWDFTPRNDDGLDVPAAYNAGVSVRDKQWSQEIRLASPSG GFFDYVLGAYYFGQDLDNKSFTDYGPRADIWNGTPAGALSDVSTRGRGHIDTDSYALF AQGTWHLTERLDLTAGVRGTYEEKSAWVERYAPLGGAAVSGAAAAARNGRVGAYDSGD IGLHSVSPSALLSLSYRFSDQVLGYASLSHGEKSGGVNLTVASAPSAGADSLLIGTER ANDAELGLKTTLLDNRLILNGNLFWTVVHGYQANAYDEANRTQYLTNAGDVRSRGLEF EATALPIRGLTLNFNASYNDVRYLSYKNAPCAPEVAFQAGAPASCDLSGHQVVGASKY IANFNGEYRWKLDDGLEPYLTASYAFRSRAVGTIDDSAYGQIPSYALVNASAGLRGDY GDGQWDLSLWLKNAFDKTYFTSLWNSANGGYAGVLGTPRTLGVTARYDF" misc_feature 2577324..2579465 /locus_tag="PA2335" /note="Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; Region: CirA; COG1629" /db_xref="CDD:441236" gene 2579542..2580882 /locus_tag="PA2336" /db_xref="GeneID:883122" CDS 2579542..2580882 /locus_tag="PA2336" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251026.1" /db_xref="GeneID:883122" /translation="MPRFPMLLLSAALLAAGAHAAPSVYPTGVTRYDPQKAFNQYVIF SGADRKTHLIDMNGNEVKRWDYPGFPAAVIDPALNGGKRGHVLLQLADLAAPDKLASP GNGLANQALGELDWDGKEVWRWGDQAPGGAAHQHHDQRRLANGNTLLLANKVHAVKGF AVPRVIDDVIYEVTPQGKLAWSWTASEHLDEFGFTADQLKRVRASENPDYLHINNLAP LGENRWHAAGDRRFAPDNLLLDSRNANFIAIVDKASGKVVWRLGPNLPPIDPKSARKL PRPVDQISGQHDAHLIPEGLPGAGNLLVFDNQGDAGYPSVPRGLVSGSRVLEIDPLKK QIVWQYTAEDSQQPGWAFYSAFISSARRLPNGNTLIDEGQNGRFFQVTPGGEIVWEYV SPYFGKAPRGDARSNWVYRALPVAYDWVPEGTPREEKAVNLAVPGATPQVTARR" misc_feature 2579698..2580660 /locus_tag="PA2336" /note="Arylsulfotransferase (ASST); Region: Arylsulfotrans; cl26042" /db_xref="CDD:421257" gene 2581034..2581939 /gene="mtlR" /locus_tag="PA2337" /db_xref="GeneID:883068" CDS 2581034..2581939 /gene="mtlR" /locus_tag="PA2337" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcriptional regulator MtlR" /protein_id="NP_251027.1" /db_xref="GeneID:883068" /translation="MPRASKVTDPSYELMDDHEGHSLIYRQHGFPSPLVRWHFHKEYE LHLIVASSGKVFIGDYIGNFAPDTLFLTGPNLPHNWISQVEPDEVVARRDMLVNFTDE VLEDGSGVFSELNRLAPLLARARYGIEFRDPALIGESRRLLQRIADSGGMTRLGYFFI LMEQLAECEDYQLLSTVTSSQLADEHNVERINRAVDYIFQHYAQDLTQEQVAAHLGMT PTYFSRFFKQAAGRGFVEFVNRLRISKSCELLARSELPVTEVCFESGFSNLSNFNRRF QQLKGMTPTGYRRLVTQRLTEQNLL" misc_feature 2581094..2581339 /gene="mtlR" /locus_tag="PA2337" /note="AraC/XylS family transcriptional regulators similar to MtlR, N-terminal cupin domain; Region: cupin_MtlR-like_N; cd06976" /db_xref="CDD:380381" misc_feature 2581646..2581897 /gene="mtlR" /locus_tag="PA2337" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene 2582097..2583407 /locus_tag="PA2338" /db_xref="GeneID:883086" CDS 2582097..2583407 /locus_tag="PA2338" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="maltose/mannitol ABC transporter substrate-binding protein" /protein_id="NP_251028.1" /db_xref="GeneID:883086" /translation="MNDSIKACLAAACLALPLLAQGAETLTIATVNNNDMIRMQRLSK VFEESHPDIALKWVVLEENVLRQRLTTDIATQGGQFDLLTIGMYEAALWGAKGWLEPM SGLPADYALDDLLPSVRDGLSVKGTLYALPFYAEASITYYRKDLFQQAGLRMPEQPTW TQLGEFAARLNRPDQGQYGICLRGKAGWGENMALIGTLANAFGARWFDERWQPEFSGG EWKKALDFYVSTLKRYGPPGASSNGFNENLALFNSGKCAIWVDASVAGSFVTDKSQSK VADATGFAFAPREVTDKGASWLYSWALAIPASSRAKDAAKAFATWATSQAYGKLVADR EGVANVPPGTRASTYSEAYLAAAPFARVTLESLKRVDPNHPTLKPVPYVGIQLVTIPE FQAIGTQVGKLFSAALTGQMSSDQALAAAQQSTAREMKRAGYPK" misc_feature 2582169..2583365 /locus_tag="PA2338" /note="The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold; Region: PBP2_TMBP_like; cd13585" /db_xref="CDD:270303" misc_feature order(2582496..2582498,2582502..2582504,2582880..2582882, 2582886..2582888,2582991..2582999,2583144..2583146) /locus_tag="PA2338" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270303" gene 2583483..2584415 /locus_tag="PA2339" /db_xref="GeneID:883071" CDS 2583483..2584415 /locus_tag="PA2339" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="binding-protein-dependent maltose/mannitol transport protein" /protein_id="NP_251029.1" /db_xref="GeneID:883071" /translation="MNTSALDTPLPARPARRRLQRRRRGPGWLLVSPSVALLLLWMIV PLGMTLYFSLIRYNLLYPGENAFVGLENFTFFVTDAGFLPGALNTLLLVGSVLAISVA FGVLIAALLEAGEFFGRGAVRVLLISPFFIMPTVSALLWKNLIFHPVSGILAAVWRLF GAEPVDWLAHYPLLSIILIVSWQWLPFAILILMTAMQSLDQEQKEAARLDGAGPLAIF WHLTLPHLARPIAVVLMIETIFLLSVFAEIFTTTSGGPGYESTNLAYLIYNQALLQFD VGMASAGGLIAVLIANIAAIVLVRMIGKNLTERS" misc_feature 2583561..2584394 /locus_tag="PA2339" /note="ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpA; COG1175" /db_xref="CDD:440788" gene 2584426..2585259 /locus_tag="PA2340" /db_xref="GeneID:880929" CDS 2584426..2585259 /locus_tag="PA2340" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="binding-protein-dependent maltose/mannitol transport protein" /protein_id="NP_251030.1" /db_xref="GeneID:880929" /translation="MLTLKQSRRLRNALLGLLCWGIALLLFFPIFWMLLTSFKSEIDA FATPPQFIFQPTLENYLHINERSDYFAYAWNSLLISSSATLLCMLVAVPAAYSMAFFE TRHTKRTLLWMLSTKMLPPVGVLMPIYLLAKQFGLLDSRLALIIVYTLINLPIVVWMV YTYFKDIPVDILEAARLDGAGTWQEIVRVLLPIARGGLASTLLLSLILCWNEAFWSLN LTSSAAAPLTALVASYSSPEGLFWAKLSAVSTLACAPILVFGWISQKQLVRGLSFGAV K" misc_feature 2584432..2585256 /locus_tag="PA2340" /note="ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpE; COG0395" /db_xref="CDD:440164" gene 2585299..2586411 /locus_tag="PA2341" /db_xref="GeneID:878622" CDS 2585299..2586411 /locus_tag="PA2341" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="maltose ABC transporter ATP-binding protein" /protein_id="NP_251031.1" /db_xref="GeneID:878622" /translation="MADLKIRNLQKGFDGQAIIKGIDLDVRDREFVVFVGPSGCGKST LLRLIAGLEEASGGSIALDGTDITDTPPAKRDLAMVFQTYALYPHMTVRRNLSFALDL AGVDKREVAAKVDAAARILELQALLERKPRQLSGGQRQRVAIGRAIVRNPKIFLFDEP LSNLDAALRVQMRLELARLHQELAATMIYVTHDQVEAMTLADKVVVLNGGRVEQVGSP LELYHHPANLFVAGFLGTPKMGFLRGHLSRNQGERCEVALECGARVGLPLCAGELATG SPVTLGIRPEHLNIARPGHAFQGLLRVAADVSERLGSDSFCHVRADSGEMLTLRVRGD FAPDYGAPLELGFDPEHCHLFDSNGQALDKRLQQAA" misc_feature 2585299..2586384 /locus_tag="PA2341" /note="ABC-type sugar transport system, ATPase component MalK [Carbohydrate transport and metabolism]; Region: MalK; COG3839" /db_xref="CDD:443050" gene 2586434..2587909 /gene="mtlD" /locus_tag="PA2342" /db_xref="GeneID:879998" CDS 2586434..2587909 /gene="mtlD" /locus_tag="PA2342" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="mannitol dehydrogenase" /protein_id="NP_251032.1" /db_xref="GeneID:879998" /translation="MKLNRQHLPLLATAVARPSYDPAQLRQGIVHIGVGGFHRAHQAA YTDALMNRGEALDWAICGAGLRSDDRAMHDALAAQDYLYTLYELGDQPDTEVRVIGAI SGMLLAEDGAEALLEKLAEPAIRIVSLTITEGGYCIDDGSGEFLAELPLVRHDLANPR TPRGVFGFLCEALRRRRDTGVPAFTVMSCDNLPHNGEVARKALLAFAERLDPGLARWI ATHVSFPNAMVDRITPMTSPAHRRQLAQRHDVEDAWPVVCEPFVQWVLEDRFSAGRPA WEKVGVQFTDDVTPYEEMKIGLLNGSHLALTYLGFLRGYRFVHETLGDPLLRRYVRAF MDRDVAPLLAPVPGIDLERYKDSLVERFANRAIADQLERVCSDGSSKFPKFIVPTANR LIAAGRPLERVALVVAAWALYLGGVDEHGERYPIPDPRAAECQALVAERHGLGRRLLG VETVFGPAIPASAAFVEAFERLYDSLRRHGVSETLRQVLGE" misc_feature 2586437..2587903 /gene="mtlD" /locus_tag="PA2342" /note="Mannitol-1-phosphate/altronate dehydrogenases [Carbohydrate transport and metabolism]; Region: MtlD; COG0246" /db_xref="CDD:440016" gene 2587906..2589414 /gene="mtlY" /locus_tag="PA2343" /db_xref="GeneID:880010" CDS 2587906..2589414 /gene="mtlY" /locus_tag="PA2343" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="xylulose kinase" /protein_id="NP_251033.1" /db_xref="GeneID:880010" /translation="MTPEGRMHGLFLGIDCGTQGSKALLLDAGSGRTLGLGSAAQRPP EGRDGRREQDPADWLEAMASAVRMALEEAAVDGREVRALAVSAQQHGLLLLDAEGRAL RPAKLWCDTESAAENRELLEALGGPAGSLERLGLVLAPGYTLSKLLWSRRRFPELFAR VAHILLPHDYLNHWLTGRVCSEAGDASGSGYFDVRRRTWASDVLELVEPGGRLAAALP ELIEPGACIGNLRPEAAAALGLAPHTRVAGGGGDNMLAAIGTGNIRPGLLTASLGTSG TLSAYAERPLVSPHGELATFCASSGGWLPLACTMNLTGACGLVQDLLHLDLDEFSRLA AQAPVGAEGLLMLPFFDGERVPALPHASASLHGMTAANLSRANLCRAVLEGTAFGLRY GLDLLRASGLPGEEIRLVGGAAKNPLWRRTLADLLGLPLVCPRQTEAAALGAALQAAW SLGRESGAGESLEALCRRCVALDESTRTQPQARQQAAYEQAYRRYLEHLPPR" misc_feature 2587933..2589219 /gene="mtlY" /locus_tag="PA2343" /note="nucleotide-binding domain (NBD) of Bifidobacterium adolescentis xylulose kinase (XK) and similar proteins; Region: ASKHA_NBD_FGGY_BaXK-like; cd07809" /db_xref="CDD:466809" gene 2589455..2590387 /gene="mtlZ" /locus_tag="PA2344" /db_xref="GeneID:878614" CDS 2589455..2590387 /gene="mtlZ" /locus_tag="PA2344" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="fructokinase" /protein_id="NP_251034.1" /db_xref="GeneID:878614" /translation="MYLVCGEALFDVFSLESAARSNELGFTAIAGGSPFNVAVGLRRL GVEAALFGGLSSDYLGARLRRVLEEEGVDCGFLVPSDAPTTLAMVGLDASGSAQYQFR GEGCADRQVRLEHLPTLDGRIRGLHVGSYTLVVTPVADTLLALVRRESGRRLVSLDPN VRLDPQPDIDLWRRRVEAFASHAHLIKASEEDLALLYPGRDPGEVARGWLNPRCRLVF VTHGGAGASVHCTHGSWSRPADTALPLRDTVGAGDTFQAATLAYLRRLDADSPAGLAA LSREAIDAMLAFAIRAAAVTCSRVGPDLPFAHEL" misc_feature 2589455..2590363 /gene="mtlZ" /locus_tag="PA2344" /note="Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into...; Region: bac_FRK; cd01167" /db_xref="CDD:238572" misc_feature order(2589560..2589562,2590202..2590204,2590211..2590213) /gene="mtlZ" /locus_tag="PA2344" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:238572" misc_feature order(2590019..2590021,2590112..2590114,2590196..2590198, 2590205..2590210,2590217..2590219) /gene="mtlZ" /locus_tag="PA2344" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:238572" gene complement(2590430..2591665) /locus_tag="PA2345" /db_xref="GeneID:879884" CDS complement(2590430..2591665) /locus_tag="PA2345" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251035.1" /db_xref="GeneID:879884" /translation="MQSANASELTTDIAVIGGGAAGIGVIASLLKRSPGLRISLIEPA DTHYYQPGWTLVGGGAYAQGDTARPMAGLVPPGVEWLRTRVERVDPEARRLLLEGGDS LEYRNLIVCPGLRLAWERIEGLEETLGRNGVTSNYRYDLAPYTWELVRGLRGGKALFT QPAMPIKCAGAPQKAMYLSCDHWLREGVLQDIEVEFDLAGAALFGVADFVPPLMEYVR KYSAELAFNSNLVKVDGAARKAWFEVKDADGNTNLAEKDFDLLHVVPPQLPPTFVAAS GLGDAAGWCEVDPATLQHVRHGEIFALGDVCGTANAKTAAAARKQIVVVAENLLGLRS GRGLPLRYDGYGGCPLTVERGRVVLAEFGYAGKLLPTFPLEPTAASRFAWLLKRHVLP WVYWNAMLKGREWLARPGR" misc_feature complement(2590592..2591575) /locus_tag="PA2345" /note="NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism]; Region: FadH2; COG0446" /db_xref="CDD:440215" gene 2592084..2593319 /locus_tag="PA2346" /db_xref="GeneID:879885" CDS 2592084..2593319 /locus_tag="PA2346" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251036.1" /db_xref="GeneID:879885" /translation="MTDETAPKDLRDQAPRLLPARLIENDAQALQAAHEVAGLARREA ALRDRERRLPWQELELFTRLGLGGIGIPRAHGGAQVSHVTLAEVFRVICAADPALGQI PQNQFGLLSVIDNVASPAQKRKLFRGILDGRRLANAGPERNTRHTLELKARVRRDGDG YRVSGEKFYSTGALFAHWVAVKAIDEEERAVMLFVERGAPGLRIVDDWSGFGQRTTAS GTVLLDEVPVAGDMLIHNGLLAEIPSLQGAVSQLIQAAIDAGIAQAALDDAQAFVRER SRPWIDAQVERASDELYSIAEVGRLQIELHAANALLEKAGQVLDEVAARPVDAESAAR ASIAVAEAKVLSTEISLAASEKLFELAGSRATLAEFNLDRHWRNARTHTLHDPVRWKV HAVGDYYLNGARPARHSWI" misc_feature 2592141..2593316 /locus_tag="PA2346" /note="sulfur acquisition oxidoreductase, SfnB family; Region: sulfur_SfnB; TIGR04022" /db_xref="CDD:274924" gene 2593330..2594547 /locus_tag="PA2347" /db_xref="GeneID:880014" CDS 2593330..2594547 /locus_tag="PA2347" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251037.1" /db_xref="GeneID:880014" /translation="MSLAHATRDNPTAAAHRIGSDDEALETARELAALFARESIQRDR ERRLPLEELELFSRSGLWGIAVPREYGGAGVSRVTLAKVVAIVSAADSSLGQIPQNHF YALEVLRVNGSPAQKGRLFGAALAGERFGNALAEIGTRTASERRTRLRADGDGYRLDG RKFYCTGALYAQRVPTLAVDDEGRQQLAFVPRDSAGLEIVDDWSGFGQRTTGSGSALF DRVAVAAEDVVSFQDAFERPTTVGPLAQILHAAIDAGIARGAFEDTLRFVRERARPWV DSGVDKASDDPLTIHEIGRLAIRLHAAEALLERAGRVLDRATAEPDAESVAAASIAVA EARALTTEVALLAGSKLIELGGSRACLAELGLDRHWRNARVHTLHDPVRWKYHAVGDY YLNGRLPPRRGTL" misc_feature 2593372..2594544 /locus_tag="PA2347" /note="sulfur acquisition oxidoreductase, SfnB family; Region: sulfur_SfnB; TIGR04022" /db_xref="CDD:274924" gene 2594565..2595953 /locus_tag="PA2348" /db_xref="GeneID:879907" CDS 2594565..2595953 /locus_tag="PA2348" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251038.1" /db_xref="GeneID:879907" /translation="MSKKQILLNAFSMNCVGHINHGLWTHPRDRSSDYRKLRHWTELA RLLERGLFDGLFIADILGVYDVYQGGIEVTAREAVQLPVNDPLMLVSAMAGVTEHLGF GVTANLTYEAPYPFARRLSTLDHLSDGRIGWNIVTGYLESAAKAMGQSAQIEHDRRYD RADEYLEVLYKLWEGSWEDDAVLADRQRRVYARPEKIHKIRHHGEFYQVEGYHLAEPS PQRTPVLFQAGSSERGLAFAARHAECVFVSGQTREATRQLVQRIRAAVVGAGRRAEDI RIFMGINVIVAATAAEARDKHAEYRRYASPEAGLAHFASSSGIDLSRYGLDEPIRYEK NNAIESVVKNLTVARTDSTVRKLLDQLALGGRYVTLVGDPRQVADDLEGWIADTGLDG FNLTRTVEPESYADFIDLVVPELQARGSYKTAYAPGTLREKLFGDGRARLQAEHAGAA FRQPPAARQRQA" misc_feature 2594586..2595863 /locus_tag="PA2348" /note="FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; Region: FMN_nitrolo; TIGR03860" /db_xref="CDD:274819" gene 2595985..2596779 /locus_tag="PA2349" /db_xref="GeneID:881889" CDS 2595985..2596779 /locus_tag="PA2349" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251039.1" /db_xref="GeneID:881889" /translation="MLNTLKTLSLAVLLGSGPAQAADAPLKIGTTAAFAPPLEVAVSE AGKQGLKVELVEFSDWNAPNITLAQGDIDANYFQHVPFLENANREGGFQLKPFAPGII NNVGLYSKRYASLAELPEGASVAIANDPINGGRGLQLLQKAGLLKLRDGVGYKATLDD IVDNPKDIRITELEAVQLARALDDFDLAQGYPHYLRLAGTIDPTRALLFDGIDNREYV IQFVTRGDYQDRDGRLARFVDIYQHSPVVRAALDKAHGTLYQPGWE" misc_feature 2596060..2596773 /locus_tag="PA2349" /note="NlpA lipoprotein; Region: Lipoprotein_9; pfam03180" /db_xref="CDD:427184" gene 2596776..2597885 /locus_tag="PA2350" /db_xref="GeneID:878114" CDS 2596776..2597885 /locus_tag="PA2350" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="methionine ABC transporter ATP-binding protein" /protein_id="NP_251040.1" /db_xref="GeneID:878114" /translation="MTAMTVPPSLLPLEPFPTAPDTRASTPHIRLHGLGKRYPGGVQA LREIDLEIRRGEVFGIIGRSGAGKSSLIRTLNRLERPSEGQVLIDDEDIGGYDGQRLV ALRRRIGMIFQHFNLMSAKTVRQNIALPLRVAGVPRARIEERVAGLLQLVGLEEKRDA YPAQLSGGQKQRVGIARALVHQPQILLCDEATSALDPESTQAILALLRDINRRLGLTI VLITHEMAVIREICDRVVVLECGRIVEQGEVWEVFGDPRHAVTRSLLGSLRAALPADL QARLRQAPGAGDPVLLDLQYTGASRRVPDLLAIARAIGQRVDLLHGGIERIQGRALGR LLLQVGAPPGELPGVLAKAALVADKVEVLGHVAHA" misc_feature 2596857..2597867 /locus_tag="PA2350" /note="ABC-type methionine transport system, ATPase component [Amino acid transport and metabolism]; Region: AbcC; COG1135" /db_xref="CDD:440750" gene 2597869..2598522 /locus_tag="PA2351" /db_xref="GeneID:881932" CDS 2597869..2598522 /locus_tag="PA2351" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_251041.1" /db_xref="GeneID:881932" /translation="MSPMLERLWQGFLDTLLMIGASSAIVLLVGIPLALVLVTTGPGG IFEARLLNRILGGLVNVLRSVPFLILMVALIPFTRMIVGTSYGVWAAVVPLTIAATPF FARIAEVSLREVDHGLVEAAQAMGCERRHIICNVLLPEARPGIVGGFTITLVTMINSS AMAGAIGAGGLGDLAYRYGYQRFDTQVMLTVIIVLVLLVTLIQFGGDRLARLLNKRL" misc_feature 2597869..2598516 /locus_tag="PA2351" /note="ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; Region: MetP; COG2011" /db_xref="CDD:441614" gene 2598700..2599827 /locus_tag="PA2352" /db_xref="GeneID:881920" CDS 2598700..2599827 /locus_tag="PA2352" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycerophosphoryl diester phosphodiesterase" /protein_id="NP_251042.1" /db_xref="GeneID:881920" /translation="MRQRFWQGTFKTLGFLGLTAGLAAQAAEPSGKALSAAAGVPWPA VIAHRGASYDAPEETAAAYLLARDLGADYLEADVQRSRDGVLVALHDDTLERTTDVAE VFPERAKDPVSSFTLAELKRLDAGSWFNRAFPQRARPGFVGLRILTLDEMLDIAEGGA NKPGLYLETKVPAQFPGIEDDLRKLLERRGWLQPRERAAAGHVDVAHGNGRVILQTFE KSSLELLQESMPQVPKILLLWLGDGYLEARSPVTFKESGETDKAAFYARQEVKSEAEF GAWLDWAKAHGALGTGPSATLSERGEQSYADLVKPWMNRMTHARGLFIHAYSVDSAED FKALGAAGVDGFFTNRTSELLKFQGRPAAQDMDALLRRHGY" misc_feature 2598826..2599773 /locus_tag="PA2352" /note="Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins; Region: GDPD_SaGlpQ_like; cd08601" /db_xref="CDD:176543" misc_feature order(2598841..2598843,2598922..2598924,2598928..2598930, 2598967..2598969,2599201..2599203,2599342..2599344, 2599678..2599680) /locus_tag="PA2352" /note="active site" /db_xref="CDD:176543" misc_feature order(2598841..2598843,2598967..2598969) /locus_tag="PA2352" /note="catalytic site [active]" /db_xref="CDD:176543" misc_feature order(2598922..2598924,2598928..2598930,2599201..2599203) /locus_tag="PA2352" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:176543" gene complement(2599893..2601047) /locus_tag="PA2353" /db_xref="GeneID:881974" CDS complement(2599893..2601047) /locus_tag="PA2353" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251043.1" /db_xref="GeneID:881974" /translation="MPDTSPDLPAMSPLAVYRQAVEQRGFAPDEAQRRAAEALERCFQ ALHEAHRHGAIQGVYLWGPVGRGKTWLMDHFYQCLRVPARRQHFHHFMQWVHQRQFEL TGTADPLRALARELARDVRVLCFDELFVSDIGDAILLGSLLRIMFEEGVVLVATSNQP PEQLYADGFNRERFLPAIEAIQRHMAVVAVDGGQDHRLHPGRAEQRYWVVEAGQASGF AELFARLSAGEAASTQPIELGHRPLAVHRHSESVLWCSYAQLCEAPLSALDFIGLCDR YRAILMDDLPCLSASQREGRIARGTEDGAQLVEAGDRELPQLSVHDDGVRRFIALVDE CYDRKVPLYLEARVPLEALYTEGYLAFAFRRTLSRLREMQLARFGSDSAG" misc_feature complement(2599926..2600999) /locus_tag="PA2353" /note="cell division protein ZapE; Region: ZapE; NF040713" /db_xref="CDD:468677" gene complement(2601219..2602349) /locus_tag="PA2354" /db_xref="GeneID:882192" CDS complement(2601219..2602349) /locus_tag="PA2354" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251044.1" /db_xref="GeneID:882192" /translation="MNASTHTPDRLLTLPRSPNLATSIRATAQVFEDPKSQALLEHLR QVAPSEASVLVIGETGTGKELVARHIHNLSARRTGPFVAVNCGAFSESLVEAELFGHE KGAFTGALAAKAGWFEEANGGTLFLDEIGDLPMPIQVKLLRVLQEREVVRLGSRKSIP IDVRVLAATNVQLERAINAGHFREDLYYRLNVVSLELSPLRERPGDILPLTRHFIAEY SRRLGYGQSQLSPEAAQKLRAYSWPGNIRELENVIHHTLLICRDGLIRADDLHLSNLR LERGEELARGGPASGAAEHLLQQAFQRLFEEQGENLHGRVEDALLRAAYRFCHGNQVH TANLLGLSRNVTRTRLIAIGELVVNKRGGQRIDGERAVRLSI" misc_feature complement(2601321..>2602262) /locus_tag="PA2354" /note="RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:443041" gene complement(2602346..2603530) /locus_tag="PA2355" /db_xref="GeneID:879208" CDS complement(2602346..2603530) /locus_tag="PA2355" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="FMNH2-dependent monooxygenase" /protein_id="NP_251045.1" /db_xref="GeneID:879208" /translation="MNAKTRPEAQTPLQIARRLAADFAENAAERDVAGGTPKAERDAL RRSGLLSLIIPREYGGLGASWSETLQTVRELARVDSSIAHVYGFQHLMLATVRLFSRP EQWQPWFELTARNRWFWGNALNPLDNRTVARRFDGWREFSGKKSFCSGARDSEMLIAS ALDGEGGALLIAAIPTARSGISLGQDWDNMGQRQTDSGSAIFERVRVEESELLLDPGP LSTPFACLRPLIAQLIFTEVFLGIAEGAFEEARQYTLREARPWFRSEVAEANADPYVL ARYGEFWVGLESTRALVERAAQRLDAAWSKGPALDASERGQLALAIAAAKVAATRNGL DLCNRMFEVTGARSTHAALRLDRYWRNLRTQTLHDPLDYKIRELGDWALNQSPPQPTF YS" misc_feature complement(2602367..2603491) /locus_tag="PA2355" /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933" /db_xref="CDD:447864" misc_feature complement(order(2602400..2602402,2602406..2602408, 2602412..2602420,2603084..2603086,2603090..2603092, 2603162..2603164,2603168..2603170,2603258..2603260)) /locus_tag="PA2355" /note="active site" /db_xref="CDD:173838" gene complement(2603560..2604705) /gene="msuD" /locus_tag="PA2356" /db_xref="GeneID:879651" CDS complement(2603560..2604705) /gene="msuD" /locus_tag="PA2356" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="methanesulfonate monooxygenase" /protein_id="NP_251046.1" /db_xref="GeneID:879651" /translation="MNVFWFLPTHGDGHFLGTSQGARPVSLPYLKQVAQAADSLGYHG VLIPTGRSCEDSWVVASALAPLTERLRFLVAIRPGIVSPTVSARMAATLDRLSGGRLL INVVTGGDPDENRGDGIHLGHAERYEVTDEFLRVWRRVLQGEAVDFHGKHIHVENAKA LYPPLQRPYPPLYFGGSSEAAHELAGEQVDVYLTWGEPLPAVAAKIADVRQRAARHGR TVKFGIRLHVIVRETAEEAWRAADRLIEHISDETIAAAQQSFARFDSEGQRRMAALHG GRRDRLEIQPNLWAGVGLVRGGAGTALVGDPRQVAERIGEYAELGIDSFIFSGYPHLE EAYRFAELVFPLLPEPYASLAGRGLTNLTGPFGEMIANDVLPARAGA" misc_feature complement(2603569..2604705) /gene="msuD" /locus_tag="PA2356" /note="alkanesulfonate monooxygenase; Provisional; Region: PRK00719" /db_xref="CDD:234821" misc_feature complement(order(2604025..2604027,2604031..2604033, 2604127..2604129,2604169..2604174,2604328..2604330, 2604388..2604390,2604547..2604549,2604676..2604678, 2604688..2604690)) /gene="msuD" /locus_tag="PA2356" /note="active site" /db_xref="CDD:238527" misc_feature complement(order(2604220..2604225,2604229..2604240, 2604244..2604246,2604358..2604363,2604370..2604372, 2604421..2604423,2604430..2604432,2604439..2604444, 2604451..2604456,2604460..2604462,2604511..2604513, 2604520..2604525,2604532..2604534,2604541..2604558)) /gene="msuD" /locus_tag="PA2356" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238527" misc_feature complement(2604478..2604483) /gene="msuD" /locus_tag="PA2356" /note="non-prolyl cis peptide bond [active]" /db_xref="CDD:238527" misc_feature complement(order(2603977..2603994,2604013..2604024, 2604205..2604246,2604331..2604339,2604358..2604384)) /gene="msuD" /locus_tag="PA2356" /note="insertion regions; other site" /db_xref="CDD:238527" gene complement(2604715..2605275) /gene="msuE" /locus_tag="PA2357" /db_xref="GeneID:882283" CDS complement(2604715..2605275) /gene="msuE" /locus_tag="PA2357" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="FMN reductase MsuE" /protein_id="NP_251047.1" /db_xref="GeneID:882283" /translation="MTSPFKVVAVSGGTYRPSRTLVLTQALIAELGQSLPIDSRVIEL TDIAAPLGATLARNQAPAELQAVLDEIESADLLLVASPVYRGSYPGLLKHLFDLIDLN ALIDTPVLLAATGGTERHALVLDHQLRPLFSFFQAITLPIGVYASEADFDNYRIVSEP LKARIRLAAERAAPLFGGRSELLKIA" misc_feature complement(2604739..2605260) /gene="msuE" /locus_tag="PA2357" /note="FMN reductase, MsuE subfamily; Region: FMN_reduc_MsuE; TIGR03566" /db_xref="CDD:211840" gene complement(2605435..2605824) /locus_tag="PA2358" /db_xref="GeneID:878242" CDS complement(2605435..2605824) /locus_tag="PA2358" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251048.1" /db_xref="GeneID:878242" /translation="MLRSARLCRSLPVAAFPAAPSPPGPPVTATLVSRPGEEDRCMPY CSPEQLADLGPLLDCLRRWPRIREPRPGVFYLGDQPFCQFHSRNGQRWADVKRRKGRL PPFVLPPGDQHSARAFQIFLLQAYKLN" gene complement(2605937..2607022) /locus_tag="PA2359" /db_xref="GeneID:882226" CDS complement(2605937..2607022) /locus_tag="PA2359" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251049.1" /db_xref="GeneID:882226" /translation="MSVITHPHARELTKSVRATVLVFNDPRSRELLERIERLAPSEAN ALVIGETGTGKELVARHIHALSGRNGGPFVAVNCGAFAESLVESELFGHEKGAFTGAL QSKAGWFEAANGGTLFLDEIGDLPPSIQVKLLRVLQEREVVRLGSRRPIPIDVRLVAA TNVDLADAVVAGHFREDLFYRLHVATIQLPPLRERRGDILPLAEYFIVEHCRRLGYTS ASLSPEAERKLLGHSWAGNIRELENAIHHALLVCRNRLIQPADLHLIDMRARQEPNGL RRAPESAAGSALEAALQALFEENREDLYEHIEETVFRAAYRFCHGNQLQTGRLLGISR NIVRARLEKIGELETSPRHNVVSLVGK" misc_feature complement(2605988..>2606962) /locus_tag="PA2359" /note="RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:443041" gene complement(2607132..2608232) /locus_tag="PA2360" /db_xref="GeneID:882227" CDS complement(2607132..2608232) /locus_tag="PA2360" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251050.1" /db_xref="GeneID:882227" /translation="MTLPLSGNALSLEVLLEPIDPGQACGPSLRYDPDYDRLRELRRE DDSSLPTGVWQAEAKRADWAAVEQLASELLQRRSKDLMLAAWLGEAWLQRGGLGGLQR ALVLLAELCERYPEEVHPQAQDGDQSWRVPPIDWLLRRYAELLHTRLPLMGQGAFAEI TLYAWQRLQRQQVASGDSKSAKAALEAAQLQQKKLDEALRAEPLVQWQRKQASLLACQ QQLLRLEQWCDRCLGELAPSCQPLREVIAQWLALLKEFIAMHPQAPLSEEQPPVAEAD ASEGDTDGEESVPASAPSGPAGAPTSREDAYRQLLLIADYLARTEPHSPVPYLIKRAV EWGNKPLSELLAELINADSEARRVWSLLGVLP" misc_feature complement(2607144..2608205) /locus_tag="PA2360" /note="type VI secretion-associated protein, ImpA family; Region: VI_chp_8; TIGR03363" /db_xref="CDD:274544" gene complement(2608229..2612044) /locus_tag="PA2361" /db_xref="GeneID:882236" CDS complement(2608229..2612044) /locus_tag="PA2361" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251051.1" /db_xref="GeneID:882236" /translation="MSGATLFMLVLLLVLLALLLGALGWWWRTRGGTEIRSFYAAVRQ MEREQGWQGRYEAPWLLMLGNETEGEQLCSTWRLLPVARPAWFGRWWSDGEGAILLVP ESVFLPDEGLRRQSGAWLRLLRLFLRLRGRRALDGVVWNIPLARLQDGEQAANLGLAA RRRYVELTQRLGLSLPVYVVITGMEDLPGFQELLAALPEEARERALGWSSPFAAEAAW QSRWCEQALEEITATLTESIVELGTLRGQVDNELYCLPPRLESLRGSLQALLEPVFQG NARGEAPRFRGLYLSGSEAAGAAADEVLPAVDAPRRRSSFASQLWARRILAEEGLAQA VPRILQLRQRWQRGIGLAALCLCLLWGGLMTWVWRDALRDAGELSQLLHGASERYQPL DDDTRRAAQVRQNVQAWWQLVSQAPRWRFTSLAFPSSWFSSLDARIDNAYRRVSERLL VRPLRSLLEGEASDLRAIRSDGQPGLKEGDDPSQWKDYLAAKDLVARATTLERHNRLF AQAIDNRRTPLDDLLQLSNDALGSSYNAGSLARLAYYNRTLFAERPADLAALDLGRVA ATAADNFHDLMARWLNAYFLTDSLERTGNALTQELAQLGQERDATAAQLLGIGELINH LQQQVNRINLIWGNGVGQDLVPGYQNLLKSAQQSSLLGNRVEELQNLTVQLQQQFRSE WIAPPEAAGDGLLVKQGATLKLADDLLGLKRAIDDLKTKDFVSVALADKTLADHSLLS IDDIGVTQALSFFNDFTGYYESTLPSLNPRYRYSVLHAAASAATEAMWQSLGPRSRSL ASRNASRFDVQVKQVQVLQAALLELQDLQAGARLLLSLNALAVADIGQALRDIDEQAV LREPVDFSRWSGAPNFGLQMFRAQDSAELKQSLNSQFNAMAAVAERHAPALEWLQAQQ SSLATADYNAFVRFSALNAELQKFKADNPASTAAQLAKLVGNDFNQMDIGSCADILNG VLLPSSRSDLATRLVDLRQGALGRCQSLQQQQAAQAWKDLADYFNQYLAGRFPFAYSL EAADAEPGRVRHLLQLMETRLPQVREGLAQVRSPDLPAAEDFVRRLEQAQRWLGPLFE RDKSGLLGVALDIDWRSDRSLERGADQVIAWSLYSGDQESRFPGAQDKGLTWNVGDPL KIMLRWAKNGSQRPADDPRQASLAVADLEAGWSYQGSWALLRMMRAHFSRQRPPNVDY TEFPLVLQLPVYAPYSPENEARMFLRLSLMSLGGKTPLSIQPLPVRAPQSPFATLLPA TVASTGGTP" misc_feature complement(2611001..2611639) /locus_tag="PA2361" /note="IcmF-related N-terminal domain; Region: IcmF-related_N; pfam14331" /db_xref="CDD:433873" gene complement(2612041..2612799) /locus_tag="PA2362" /db_xref="GeneID:882222" CDS complement(2612041..2612799) /locus_tag="PA2362" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251052.1" /db_xref="GeneID:882222" /translation="MPEGSAGPFSQAYQEQPLSTAFRQAWQEWLEAWGALDRDAQDVP RMVERALELSTRITRRLWRSAFASVGDAAGVQVKAMVYAFVALVDETLVFSAWPGQGA WQDKPLESHLYGSRQAGEYLPLAIKRLLDERAPASRDLANVYLQCLILGFRGRLRGPR GEALHEKWRQALFAFAWQREADAADLGRRLEQPAAAPPRRLPVRAALPDGFRLGLAVL GLVLLMSGIGHLFWRDIQHEMAAVTHLADAEQAP" misc_feature complement(2612179..2612766) /locus_tag="PA2362" /note="Type VI protein secretion system component TssL/VasF/DotU [Intracellular trafficking, secretion, and vesicular transport]; Region: DotU; COG3455" /db_xref="CDD:442678" gene complement(2612817..2614148) /locus_tag="PA2363" /db_xref="GeneID:882215" CDS complement(2612817..2614148) /locus_tag="PA2363" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251053.1" /db_xref="GeneID:882215" /translation="MSVLPDAVCWHEGMQLLPQHFQLQGLRAEALAARIGQACNPWFW GVTALELDPSALCAGQVRVLHLEAILPDGLPVSVQAGVDAPLEFDLETALAAAEGPLL NVHLAVSPLWRAGQLLPLKGRLQSRVGAPLPDLASGEHPEPITVWRASLRLVGDDGKA DSVCLPLLRVAKEGGAYVSLPYVPPTPLILPESPLGRRVQSLCARAREKALFLGGRLR LAQQAGNQDDAVEIRRQLAALWTRLPEVEGLLASRAASPLALHGSLLGLAGAWAALDP LAGVPAFEALDFLDLRRGYEPLLDWLERAIESIRAGYRCLPFEQEEQVFSVRLPDPAP RQRLVVGLRMPAGAGEQAAADWLERAIVASDPHLPLLARQRMSGLPRQPMNRQEQVAY SVGDDTRLFVVQGAGDWFDAGQPLRIVAPVSGVASSPWQIVLFVADGSDNT" misc_feature complement(2612913..2614127) /locus_tag="PA2363" /note="Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE; Region: T6SS_VasE; cl01406" /db_xref="CDD:470190" gene complement(2614208..2614684) /locus_tag="PA2364" /db_xref="GeneID:882201" CDS complement(2614208..2614684) /locus_tag="PA2364" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251054.1" /db_xref="GeneID:882201" /translation="MKHGCFTICRKFSLALAILALAGCSYFFAPRVELQRLTLDVAAR ANDDSPIAVDFVAVKDAELFKELAGLPASQWFANREQYRRDYRQQFAVWSLELVPGQF IESESFPLRGDRATGLLVFAGYNTPGAHRLRLDQQQRVWLRLDTREMRLVNDPATR" gene 2614893..2615438 /locus_tag="PA2365" /db_xref="GeneID:882187" CDS 2614893..2615438 /locus_tag="PA2365" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251055.1" /db_xref="GeneID:882187" /translation="MAESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADL SGKPDTPPAKLVERRFVDIDRDNFNEILSSISPRATLQVDNTISGDDSKLNVELRFNH IEDFDPVNLVKQVVPLRRLFEARQRLRDLLTKLDGNDDLDQLLQDVVANTEGLQEIKA ARPEAEAAPAGDSEPPADQPA" misc_feature 2614893..2615369 /locus_tag="PA2365" /note="Predicted component TssA of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]; Region: TssB; COG3516" /db_xref="CDD:442738" gene 2615461..2616945 /locus_tag="PA2366" /db_xref="GeneID:882284" CDS 2615461..2616945 /locus_tag="PA2366" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="uricase" /protein_id="NP_251056.1" /db_xref="GeneID:882284" /translation="MPKSSAAEQSGESSTQTLSLLDEIIAKGRMAHDDSQQDYARDML AEFATQVLDEGMAVDKDTVAMINDRISQIDALISDQLNQIIHHPELQKLEASWRGLHQ LVSNTETSARLKLRLLNVGKNELQNDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLL IGDFTFGRHPQDIGLLEKLSNVAAAAHAPFIAAASPRLFDMNSFTELAVPRDLTKIFE SLELIKWRAFRESEDSRYVSLVLPNFLLRLPYGPETRPVEGMNYVEDVNGTDHSKYLW GNAAWVLAQRITEAFAKYGWCAAIRGAEGGGAVEGLPAHTFRTSSGDLSLKCPTEVAI TDRREKELNDLGFISLCHKKNSDVAVFFGGQTTNKARLYNTNEANANARLSAMLPYVL AASRFAHYLKVIMRDKVGSFMTRDNVQTYLNNWIADYVLINDNAPQEIKAQYPLREAR VDVSEVAGKPGAYRATVFLRPHFQLEELSASIRLVANLPPPVAA" misc_feature 2615509..2616930 /locus_tag="PA2366" /note="Predicted component TssB of the type VI protein secretion system, VipA/VipB/TssB family [Intracellular trafficking, secretion, and vesicular transport]; Region: COG3517" /db_xref="CDD:442739" gene 2617019..2617516 /locus_tag="PA2367" /db_xref="GeneID:881890" CDS 2617019..2617516 /locus_tag="PA2367" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251057.1" /db_xref="GeneID:881890" /translation="MDAIILDFGSDIKGDSLLVGYENKIEIMSYSHNVAMQVTNDVSN SERTSGKPHVGEFTLTKFIDTSTPTLNEYCCAGKPIAEATITIGRNAAEGNGQIMPFI VYTLNNVVLSNVSVSGGAGGKPVETLSLNFTKIKWELTAQKDDGTKEGTAASTWDLAA NQLVK" misc_feature 2617049..2617504 /locus_tag="PA2367" /note="Type VI protein secretion system component Hcp (secreted cytotoxin) [Intracellular trafficking, secretion, and vesicular transport]; Region: Hcp; COG3157" /db_xref="CDD:442391" gene 2617529..2617954 /locus_tag="PA2368" /db_xref="GeneID:881891" CDS 2617529..2617954 /locus_tag="PA2368" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251058.1" /db_xref="GeneID:881891" /translation="MSGALPPLFERLSAEADERPAFDDRALAESVRGELLRLLNTRRP ANARSGILAYGLADWTAVQRLRAEDRRQLAREVRAAVEHFEPRLQLAEVEVEPDPGNP QRLRIQLGGSLRSGSRLTPALFVIEQGCDGLEVRHERFD" misc_feature 2617544..2617900 /locus_tag="PA2368" /note="Baseplate wedge protein gp25; Region: GPW_gp25; cl01403" /db_xref="CDD:470187" gene 2617938..2619731 /locus_tag="PA2369" /db_xref="GeneID:883074" CDS 2617938..2619731 /locus_tag="PA2369" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251059.1" /db_xref="GeneID:883074" /translation="MSDSIDADLLDYYQRELTWLRHAGGAFAERYPKVARRLQLAPGE CPDPHVERLLEGFSLLTARLQRRLDDDYAEFSDALLEQLYPLALRPLPSCAIVQFEPD PTQGNLAEGYRLPRDTALFVTTRGGDSVHFRSSAEATLWPLAIDEATLLGGEEAQALT GVGAARSALRLSLRCLGEYRWDELSIERLRIHLAASPMGCAILYDLLAAHTVQVMAGA PGTPPAALRGLPEIVGFAADEALLPEEDGGHPGLRLLAEYFAFPDKFHFFDLPLSGAL ADGQTLYLYLVFDRAPTARLHLQAEDFQLGCAPAINLFPRTSEPLRPDGTRSEYRLVA DSHRENSVEIHSIRAVRSVAGSTVQPVPAYYGCRHDSHLGTLYWHARRIAGLTPNRLG SDLLLSLVDTGFDPLREAPAFSLTAELLCTNRYLAERLGAGTALGFERPGPVAAARLR NAPSAQSQPRLDGQSRWRLVSQLTLNHLSLVEGPRALEALREILALHNLRDDASARRQ IEGLRQLDCQRVVAHVGEDAWRGWRNGLEIRLRLDPQHFVGASGVLFSAVLAQFFSLY ATANRFVRTVLVEADKEVKTWQPQAGSPLSL" misc_feature 2617953..2619716 /locus_tag="PA2369" /note="Type VI protein secretion system component VasA [Intracellular trafficking, secretion, and vesicular transport]; Region: VasA; COG3519" /db_xref="CDD:442741" gene 2619695..2620711 /locus_tag="PA2370" /db_xref="GeneID:883136" CDS 2619695..2620711 /locus_tag="PA2370" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251060.1" /db_xref="GeneID:883136" /translation="MATPGRLAALPLSQRLRRTPQRFELLQALLLLERERPQALPLGT GNAPRAEALRLRGPLLPLFASSEVESLLDDPQQPVLSTPVFGLGGPDGPLPYAYQEWL QQRARQKDHAPAEFLDLFQHRLLSLLYRVLRKHRVALGFAVPAATPVQAQLRALSGLL PKALQERLALPDSAVLARTALFAGGRRSLAGFAGLVRQHFGVEARLDAYQGAWKEIPA ASRSRLQRGGRNLRLGRDAIAGTRTWDEHAGIALSLGPLDAREAARFFPDGDAHGQLA SLAALYFGPDLDCRLSLLVSGGAPLRLERGAPPRLSWNTGLRRVEDGQRQRIDLDLRQ PEVA" misc_feature 2619695..2620693 /locus_tag="PA2370" /note="Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]; Region: COG3520" /db_xref="CDD:442742" gene 2620713..2623262 /locus_tag="PA2371" /db_xref="GeneID:877948" CDS 2620713..2623262 /locus_tag="PA2371" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ClpA/B-type protease" /protein_id="NP_251061.1" /db_xref="GeneID:877948" /translation="MELAALIGRLNPDCRRALERAAQRCLQRTHHYVEIEHLLLELLD IDGGDFACLLPRFGLERDALVAEINLSLELFKAGNTRTPALSAHTIGLLEDAVVHASV LGQAQIRSGLLLLALLDREERRALLLNSASSLLRIPHEALQANLLEWIQASREQPPAP NRPAAGGDKPESAPDPLLDQYTQDLTAEARAGRIDPIVGRDGEIRQCVDILLRRRQNN PILVGAPGVGKTAVVEGLALRIAAGEVPPSLQEVILRVLDLGLLQAGASMKGEFEQRL KGVIDAVRNSAQPIILFIDEAHTLIGAGGAEGGSDAANLLKPALARGELRTLAATTWL EYKKYFEKDPALTRRFQLVQVEEPDEATAVEMLRGVAGKLELHHGVQIMDAAIVDAVK LSHRYISGRQLPDKAISVLDTACARVALGQHDVPPPLESLRHREQALEEELQRLRREQ ATGLDHSARITALESESGDNRRTIRELETRWDEEREAVRELLDIRRELLALSESADAA KPDEELDGRIDHLAAELARLAAGLEAIRQDDPLVPEQVDSRTVAAVIAGWTGIPVGKM LADEAHAIRSLAQRMGQRVMGQEAALGAIAQRIQAYRAGLSDPAKPVGVFLLPGPTGV GKTETAYALADALYGGERNLISINLSEYQEAHTVSQLKGAPPGYVGYGSGGVLTEAVR RKPYSVVLLDEIEKAHPDVLEAFYNVFDKGVMEDGTGLVVDFRNTVILATSNVGAELL LDSPAEQVATPAFDERLRKVLLQTFRPAFLARMTVVPYRPLEEATLEGIVVAKLEKLR ERYKAATGKQFDFDPAIVKAVLAKCSAAGARDIENVLMAQVTGKLAEWVLE" misc_feature 2620740..2623259 /locus_tag="PA2371" /note="type VI secretion ATPase, ClpV1 family; Region: VI_ClpV1; TIGR03345" /db_xref="CDD:274528" gene 2624204..2626210 /locus_tag="PA2373" /db_xref="GeneID:878107" CDS 2624204..2626210 /locus_tag="PA2373" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251063.1" /db_xref="GeneID:878107" /translation="MPRPTDTNTTLSLSASTLGDLYPQTLSGGEALNELGSLTLGGYS ATALTLSNAVATHLTATLHNDADQRPLDGLVAEIRQLPGDASAERYQVLLRPWLWWLT LASNNRVFQNLATSDIVTQVFDQHGFSDYQLQLSGSYQPREYCVQYGESDLAFVSRLL EEDGIFWFFTHAAGKHTLVLADSNDAFPPIPNGPQVAYLGQGIGVRELQGVRSAQYSL QAVSGTYSATDYEFTTPGTSLYSQAEAVSGAAGVYQHPGGYTAKAQGDSLTKQRIDGL RSQETRLIGESDCRWLVPGHWFTLSGHDDDSLNIDWVLTSVTHDASHAHYRNRFEAIP KATAYRPARVTPKPRMHTQTALVVGKAGEEIWTDQYGRIKIQFPWDRDGKNDETSSCW VRVVLPWSGKGFGMQFVPRIGQEVIVTFIDGDPDRPLVTGCVYNGDNALPYALPDNQT QSGIKTNSSKGGGGFNELRFEDKKDAEEVFLQAQKDLNVNVLNDSTASIGHDETLTVQ NARTRTVKEGDETVTLEKGKRTVTIQTGSDSLDVKDTRTVTVGADQTHSTGGNYSHKV SGNFELTVDGNLTIKVSGTLALQSGGSLTLKSDADLAAQAGTSLTSKAGTSLTNQAGT SLTNKAGTSLTNDAGVSLTNKAGAEQTVDGGGMLTIKGGLVKVN" misc_feature 2624261..2625715 /locus_tag="PA2373" /note="type VI secretion system Vgr family protein; Region: VI_Rhs_Vgr; TIGR03361" /db_xref="CDD:274542" misc_feature <2625590..2625976 /locus_tag="PA2373" /note="baseplate hub subunit and tail lysozyme; Provisional; Region: 5; PHA02596" /db_xref="CDD:222900" gene 2626221..2626757 /locus_tag="PA2374" /db_xref="GeneID:877895" CDS 2626221..2626757 /locus_tag="PA2374" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251064.1" /db_xref="GeneID:877895" /translation="MAASGKLDLVRGDSHLAGNLLDGSLEGPLRIDEHDRPQASLGYR QGQLHGASTLFHPNGKVSAQLAFVDGKLHGPASFHAAEGWLQRKAHYRNGLLHGEAFN YFANGQVAEREHYRDGVRDGVYQRFHGNGQLAFDGRYLNGQLLDGAQPFADDGRPLDS EGKPMARWRWWWTRLAEP" misc_feature <2626368..2626652 /locus_tag="PA2374" /note="Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms]; Region: YwqK; COG2849" /db_xref="CDD:442097" gene complement(2626780..2627175) /locus_tag="PA2375" /db_xref="GeneID:879665" CDS complement(2626780..2627175) /locus_tag="PA2375" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251065.1" /db_xref="GeneID:879665" /translation="MGCPQVCAGATLQCSFGAAPTVLNVLPQNRTLTSGMPAANIMDH IPLLNIPTFGLCQSPANPVVAAATAAALGVLTPMPCIPATASPWIPGGPPTLLLGGMP ALDANGTLICTWGGVIKISVPGQVQMLIP" misc_feature complement(2626801..2627160) /locus_tag="PA2375" /note="Domain of unknown function (DUF4280); Region: DUF4280; pfam14107" /db_xref="CDD:433721" gene 2627452..2628093 /locus_tag="PA2376" /db_xref="GeneID:879666" CDS 2627452..2628093 /locus_tag="PA2376" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251066.1" /db_xref="GeneID:879666" /translation="MPSTRSLPARVIVADDYPLFRDGLRRVVRRYLPQAAVSEAGSFD EVLRLASSVSPEPPALFVLDLLLPGFAASQSIERLRRAYRHSAIVIVSMLDDPRLVDE VLAAGADGYLGKSLEAGEIGTALQTLGSGEPVVRLRGGSSAGSRQRALLDALTPRQQA VLRLIADGLSNKEIGRALSISPFTVRVHVSSLLRALEVNTRTAAAALAVKAGF" misc_feature 2627473..2628054 /locus_tag="PA2376" /note="transcriptional regulator NarL; Provisional; Region: PRK10651" /db_xref="CDD:182619" gene 2628225..2629499 /locus_tag="PA2377" /db_xref="GeneID:879185" CDS 2628225..2629499 /locus_tag="PA2377" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251067.1" /db_xref="GeneID:879185" /translation="MRGAPARRPHRERRRSFSAEERHMIDRVKPLMAAWVLVFASSSF ASETAGKLPRKPALGPETAGATLVIPGETDRLASLYARARGEGGKVVLWAGGDAPNQM DWLKTAFESRFPGVTLDVTVDLSKFHDLRIDQELAAGTLTPDVAMLQTTFDFDRWKAR DVLLRYKPVGFARQKKGYADPDGAYVTAYNNAFVPTYASVRLPAERYPTRFADYLKPA FKGKLVLTYPHDDDAVLYVYDKLERRYGSGFLRALAAQKPNFLRGTAAPAASVGTDSI GSLGNLTGYATDSDTPAGYFIPTDEPFIVWNQRAAIFKAARHPATAKLLLSYLGSAEF QSSYGGWRARADVGEAPGLPPLESLKNVDVHDFTRWMADRQRVASLRRHMAQIFGPVR GESPLRDPALMSLLGLTANDIVALPEPDLPIY" misc_feature 2628537..2629388 /locus_tag="PA2377" /note="ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: AfuA; COG1840" /db_xref="CDD:441445" gene complement(2629916..2632231) /locus_tag="PA2378" /db_xref="GeneID:879694" CDS complement(2629916..2632231) /locus_tag="PA2378" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase" /protein_id="NP_251068.1" /db_xref="GeneID:879694" /translation="MKRSYPDDLVIGNLSRRGFLKGVGATGVLLVAANWGWRDALAAE KKAFGADAMPHGWVDNPKIYVSIDRDGTVGIVCNRSEMGQGVRTSLAMVVADELEADW SRVKVIQAPGDEARYGNQDTDGSRSMRHWFEPMRRCGAAARQMLEQAAANQWKVPLGE CRAEQNKVLHAPSGRSLSFGELAEAAAGLEVPARDKLLLKKPEQFRYIGKDVARAIDG ADIVNGRAGFGFDARFDDMLYAVVARPPVYGGKLKRYDAAAALKVPGVVKVIEIEGRP IPSEFQPLGGVAVVAQNTWAAIKGREALVVEWDAGVNGGYDSVAYRKQLEEAARKPGK VVRDSGDAAALFAKGGDIVEAEYYLPHLAQAPMEPPVSTAWYKDGACEVWAPTQAPQV TRERIAERLKLPFDKVTVNVTLLGGGFGRKSKPDFVLEAAILAKAFPGRHLRVQWTRE DDLHFSYFHTVSVERLQAVLGADGLPQAWLHRSVAPSITALFGPDSKHQGAFELGMGL TNLPFAIPNVRLENPEAPAHTRVGWFRSVSNIPHAFAIQSFVGELAAKAGQDPKDYLL KLLGPARRIDTAELGDSWNYGESPERYPLDVGRLRGVIEEAARQSGWGGELPRGRARG IAAHYSFVTYVAVVIEVEVKDDGALLVHKATIAADCGPQINPERIRSQLEGACVMGLG LAALGEISFKDGKVQQDNFHQYELARMPLAPKAVSVHLLKPDGDLPLGGVGEPGVPPI APALCNAIFAATGKRIRELPIRNQLQGWRKA" misc_feature complement(<2631656..2632039) /locus_tag="PA2378" /note="Molybdopterin cofactor-binding domain; Region: MoCoBD_2; pfam20256" /db_xref="CDD:466407" misc_feature complement(2629940..2631634) /locus_tag="PA2378" /note="Aldehyde, CO or xanthine dehydrogenase, Mo-binding subunit [Energy production and conversion]; Region: CoxL; COG1529" /db_xref="CDD:441138" gene complement(2632228..2632698) /locus_tag="PA2379" /db_xref="GeneID:877669" CDS complement(2632228..2632698) /locus_tag="PA2379" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_251069.1" /db_xref="GeneID:877669" /translation="MITLNLNGKDHQLDVTEDMPLLWAIRDVVGYTGTKFGCGMGLCG SCTIHIDGQATRSCITPVSLAQGRKVTTIDHLHTDKVGEVVQQAWLDIGVAQCGYCQG GQIMSATALLKSNPAPSDEQIEAAMAGNICRCGTYNRIKTAIHNASAKLQEAKA" misc_feature complement(2632240..2632698) /locus_tag="PA2379" /note="Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and conversion]; Region: CutS; COG2080" /db_xref="CDD:441683" gene complement(2632963..2633199) /locus_tag="PA2380" /db_xref="GeneID:880047" CDS complement(2632963..2633199) /locus_tag="PA2380" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251070.1" /db_xref="GeneID:880047" /translation="MALEPSDVLLESVFCQLDADTPRSLHDLKGDPRANLLAIRLLFR QGRITGVLLDDPSGAEDQHGPLIYHAERLRVRRG" gene 2633494..2633736 /locus_tag="PA2381" /db_xref="GeneID:877663" CDS 2633494..2633736 /locus_tag="PA2381" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251071.1" /db_xref="GeneID:877663" /translation="MNHTASIPALPTAYDLLNTRIQRIIHAPAAQQACQACISRLPGE DEGDWAHLLESFDRSNQWLLDPQRDGSIVLRWSSAA" misc_feature 2633527..2633727 /locus_tag="PA2381" /note="Protein of unknown function (DUF1654); Region: DUF1654; pfam07867" /db_xref="CDD:429703" gene complement(2633803..2634954) /gene="lldA" /locus_tag="PA2382" /db_xref="GeneID:880725" CDS complement(2633803..2634954) /gene="lldA" /locus_tag="PA2382" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="L-lactate dehydrogenase" /protein_id="NP_251072.1" /db_xref="GeneID:880725" /translation="MSVITDIEDLRRLARKRVPRMFYDYADSGSWSEGTYRANQDDFA AIKLRQRVARNIENRSLRTRMLGQEMAMPVAIAPTGLAGMQHADGEILAARAAAEFGV RYTLSTMSICSLEDIATEVGQPFWFQLYVMRDRDFIERLIDRAKAAGCDALVLTLDLQ IIGQRHKDLKNGLSAPPRPTLANLLNIATKPRWALGMLGTRRRGFGNIVGHVKGVDDM GSLSEWTARQFDPRLNWGDVEWIKRRWGGKLVLKGILDAEDARLAADSGADALVVSNH GGRQLDGAPSTISALPAIVEAVGERIEVWLDSGIRSGQDVLKAIALGARGTMIGRPYL YGLGALGQAGVTRALEIIARELDLTMAFCGHTDIREVGRDILLPGSYPR" misc_feature complement(2633824..2634954) /gene="lldA" /locus_tag="PA2382" /note="FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase [Energy production and conversion, Lipid transport and metabolism, General function prediction only]; Region: LldD; COG1304" /db_xref="CDD:440915" protein_bind 2633867..2633879 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(2635051..2635971) /locus_tag="PA2383" /db_xref="GeneID:879585" CDS complement(2635051..2635971) /locus_tag="PA2383" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251073.1" /db_xref="GeneID:879585" /translation="MLNPDDFRFPSIEALQAFEAAARLGTFERAAELLSITGSAASKR VSGLEGMLGVSLLQRDGRSLALTSHGREYLEQIAPILAQLAAVPLHRRQVQRQQRLTL RTPPTFARQILIPRLASFAEACPEIELEILLSSPSDGQDLPLADVEVRGDSHGVAAGE RLLEERVLPMAAPGLLLGLPRPWTPAMLAGLPLLRSPLEPWQPWFRVAGLDWPEPCAG PRLLDLGMTLEAAANGQGVALARPSLARAWLAEGRLVVLFPLRSAPTHHYHLRSHQAS PASQRFAAWLAAICREAVVQGREFLPAADD" misc_feature complement(2635114..2635950) /locus_tag="PA2383" /note="DNA-binding transcriptional activator GcvA; Provisional; Region: PRK11139" /db_xref="CDD:182990" protein_bind 2635103..2635115 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(2636013..2636336) /locus_tag="PA2384" /db_xref="GeneID:879586" CDS complement(2636013..2636336) /locus_tag="PA2384" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251074.1" /db_xref="GeneID:879586" /translation="MTHSPVKQMLKEAGLKMSLARLKVIDALWEASGEQGRVPIRTLH RRLSETGTPLSLVSIRQVLGRLVESGLVTLDEQDVYSPGKASWGGAAGSAAPERRAAA NEQRL" misc_feature complement(<2636121..2636321) /locus_tag="PA2384" /note="Fe2+ or Zn2+ uptake regulation protein Fur/Zur [Inorganic ion transport and metabolism]; Region: Fur; COG0735" /db_xref="CDD:440498" gene complement(2636517..2638805) /gene="pvdQ" /locus_tag="PA2385" /db_xref="GeneID:882260" CDS complement(2636517..2638805) /gene="pvdQ" /locus_tag="PA2385" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="acyl-homoserine lactone acylase PvdQ" /protein_id="NP_251075.1" /db_xref="GeneID:882260" /translation="MGMRTVLTGLAGMLLGSMMPVQADMPRPTGLAADIRWTAYGVPH IRAKDERGLGYGIGYAYARDNACLLAEEIVTARGERARYFGSEGKSSAELDNLPSDIF YAWLNQPEALQAFWQAQTPAVRQLLEGYAAGFNRFLREADGKTTSCLGQPWLRAIATD DLLRLTRRLLVEGGVGQFADALVAAAPPGAEKVALSGEQAFQVAEQRRQRFRLERGSN AIAVGSERSADGKGMLLANPHFPWNGAMRFYQMHLTIPGRLDVMGASLPGLPVVNIGF SRHLAWTHTVDTSSHFTLYRLALDPKDPRRYLVDGRSLPLEEKSVAIEVRGADGKLSR VEHKVYQSIYGPLVVWPGKLDWNRSEAYALRDANLENTRVLQQWYSINQASDVADLRR RVEALQGIPWVNTLAADEQGNALYMNQSVVPYLKPELIPACAIPQLVAEGLPALQGQD SRCAWSRDPAAAQAGITPAAQLPVLLRRDFVQNSNDSAWLTNPASPLQGFSPLVSQEK PIGPRARYALSRLQGKQPLEAKTLEEMVTANHVFSADQVLPDLLRLCRDNQGEKSLAR ACAALAQWDRGANLDSGSGFVYFQRFMQRFAELDGAWKEPFDAQRPLDTPQGIALDRP QVATQVRQALADAAAEVEKSGIPDGARWGDLQVSTRGQERIAIPGGDGHFGVYNAIQS VRKGDHLEVVGGTSYIQLVTFPEEGPKARGLLAFSQSSDPRSPHYRDQTELFSRQQWQ TLPFSDRQIDADPQLQRLSIRE" misc_feature complement(2636574..2638703) /gene="pvdQ" /locus_tag="PA2385" /note="Cephalosporin acylase (CA) belongs to a family of beta-lactam acylases that includes penicillin G acylase (PGA) and aculeacin A acylase. PGA and CA are crucial for the production of backbone chemicals like 6-aminopenicillanic acid and...; Region: Ntn_CA; cd01936" /db_xref="CDD:238911" misc_feature complement(order(2637351..2637353,2637948..2637950, 2638089..2638091,2638155..2638157)) /gene="pvdQ" /locus_tag="PA2385" /note="active site" /db_xref="CDD:238911" gene complement(2638928..2640259) /gene="pvdA" /locus_tag="PA2386" /db_xref="GeneID:882167" CDS complement(2638928..2640259) /gene="pvdA" /locus_tag="PA2386" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="L-ornithine N5-oxygenase" /protein_id="NP_251076.1" /db_xref="GeneID:882167" /translation="MTQATATAVVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFL DKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHDRLVDFINLGTF YPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRT TRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQS AAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERL LREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALR DAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYLGDHEIGRDYRLQTDERCKVAI YAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQHLKPGTAARALHEHALAS" misc_feature complement(2638991..2640232) /gene="pvdA" /locus_tag="PA2386" /note="Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport and catabolism]; Region: IucD; COG3486" /db_xref="CDD:442709" gene complement(2640392..2640871) /gene="fpvI" /locus_tag="PA2387" /db_xref="GeneID:882249" /db_xref="PseudoCap:PA2387" CDS complement(2640392..2640871) /gene="fpvI" /locus_tag="PA2387" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /protein_id="NP_251077.1" /db_xref="GeneID:882249" /db_xref="PseudoCap:PA2387" /translation="MENHYRELLRFLSARLGDRHAAADVAHDAYLRVLERSSQAQIEH PKAFLYRTALNLAVDEHRRSRVRRAEPLEVLDDEEGLASPSPQTVVDQGQRLDNLQRA LAELPAICRSSFLLRKLDGLSHSQIAEHLNISRSLVEKHIVNAMKHCRVRMREWEAD" misc_feature complement(2640395..2640871) /gene="fpvI" /locus_tag="PA2387" /note="RNA polymerase sigma factor; Reviewed; Region: PRK12527" /db_xref="CDD:171560" protein_bind 2640955..2640973 /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452." /bound_moiety="Fur" protein_bind complement(2640961..2640979) /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452." /bound_moiety="Fur" gene 2641035..2642030 /gene="fpvR" /locus_tag="PA2388" /db_xref="GeneID:882258" /db_xref="PseudoCap:PA2388" CDS 2641035..2642030 /gene="fpvR" /locus_tag="PA2388" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="protein FpvR" /protein_id="NP_251078.1" /db_xref="GeneID:882258" /db_xref="PseudoCap:PA2388" /translation="MKTPSPADSDTLVQDAAHWCMRLHAEDFSEEERGEFQRWLAADP RHAAEYAEMEEIWALSELLPRTPAPELRNHAATRPLGRRRRGWKSQARAAALALLMLP TAGYLGWLQGWIPSNYQRYEAEGNVRHAVLPDGSEVELDLNTQLSFANFKDIRRVSLD RGEAYFHVTHDSAHPFVVKAGNGSITVTGTRFNVWKYQDNVVVTVTEGSVKVRSEGSG NDSSLTPGMQASYYPGLLQPLVEAVDTRQTLAWREGRLVLDDLPLSKALPLINRYLDA PLVLGDRSAAKLRIGGIYSTRDIRSLVDALPKVLPVDLEHREDGSIRISSRYAQL" misc_feature 2641074..2641202 /gene="fpvR" /locus_tag="PA2388" /note="Domain of unknown function (DUF4880); Region: DUF4880; pfam16220" /db_xref="CDD:435227" misc_feature 2641119..>2641301 /gene="fpvR" /locus_tag="PA2388" /note="Anti-sigma-K factor RskA [Signal transduction mechanisms]; Region: RskA; COG5343" /db_xref="CDD:444127" misc_feature 2641359..2642009 /gene="fpvR" /locus_tag="PA2388" /note="Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport [Inorganic ion transport and metabolism, Signal transduction mechanisms]; Region: FecR; COG3712" /db_xref="CDD:442926" gene 2642131..2643306 /gene="pvdR" /locus_tag="PA2389" /db_xref="GeneID:882270" CDS 2642131..2643306 /gene="pvdR" /locus_tag="PA2389" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="pyoverdine biosynthesis protein PvdR" /protein_id="NP_251079.1" /db_xref="GeneID:882270" /translation="MRRTRSTRRALLVAVCLSPLIALAAWQAYPFRSNNFDTVSVSRG SIESSVSALGTLQPRRYVDVGAQASGQIRKLHVEAGDDVTEGQLLVEIDPSTQQAKVD AGRYSIEMLKAQLAEQRAQYTLARQQYQRQQRLAAGGATRTEDVQSAQAQMLATQARI EMYQAQIRQAQASLRSDEAELGYTRIYAPMSGTVVAVDAREGQTLNAQQQTPLILRIA KLSPMTVWAQVSEADIGRVKPGMPAYFTTLSGEGRRWTGKVRQILPVPPKPLDQSNQG GGSPTSGSGGQSGSGRVVLYTVLVDVDNGDHQLMAEMTAQVFFVAATAENILTAPVAA IHDDGKGGQVAWVVGSNGKPQSRQIRTGISDRLRVQVLAGLEEGDRLLMAAPDGSDS" misc_feature 2642251..2643291 /gene="pvdR" /locus_tag="PA2389" /note="Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms]; Region: AcrA; COG0845" /db_xref="CDD:440606" gene 2643306..2645297 /gene="pvdT" /locus_tag="PA2390" /db_xref="GeneID:882237" CDS 2643306..2645297 /gene="pvdT" /locus_tag="PA2390" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="pyoverdine biosynthesis protein PvdT" /protein_id="NP_251080.1" /db_xref="GeneID:882237" /translation="MENATQPVPLIELRDIRKRYGGNGTPEVEVLKGVSLSIHAGEFV AIVGASGSGKSTLMNILGCLDRPSSGSYHFAGHDVAELDSDEQAWLRREAFGFVFQGY HLIPSASAQENVEMPAIYAGIPASERHTRARALLERLGLAERTANRPHQLSGGQQQRV SIARALMNGGHIILADEPTGALDSHSGAEVMALLDELASQGHVVILITHDRDVAARAK RIIEVRDGEIVSDSANDERPAHPSAGVERHLQADDLSQRLAEGSSEPSGAWRAELLEA VRAAWRVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIYLS GYSPNPRAPMGIVSSDDVAAIATLPQVKKVMPVNGGELVVRYGNIDYHAYVGGNNTDF PEILNWPVAEGSYFTERDEDAATTVAVIGYKVRKKLFGSANPIGRYILIENVPFQVIG VLAEKGSSSGDKDADNRIAIPYSAASIRLFGTRNPEYVIIAAADAQRVHQAERAIDQL MLRLHRGQRDYELTNNAAMIQAEAKTQNTLSLMLGSIAAISLLVGGIGVMNIMLMTVR ERTREIGIRMATGARQGDILRQFLTEAAMLSVVGGLAGIALALCIGGVLLLGQVAVAF SLSAIVGAFSCALVTGLVFGFMPARKAAQLDPVAALASQ" misc_feature 2643330..2645288 /gene="pvdT" /locus_tag="PA2390" /note="macrolide ABC transporter ATP-binding protein/permease MacB; Region: PRK10535" /db_xref="CDD:182528" gene 2645303..2646727 /gene="opmQ" /locus_tag="PA2391" /db_xref="GeneID:882223" CDS 2645303..2646727 /gene="opmQ" /locus_tag="PA2391" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251081.1" /db_xref="GeneID:882223" /translation="MSMKNLSLISACLLLGACGSTPAPLDSGLAAPSQWRYLAAGRSD ASDIRQWWKAFGAPELDSLLQRALLNSQDLGAAVARVRQAQASAVIAGAPLLPELNAT LGASRQKLLRDSGYSGTDATSDNDAVDSFSAGLSASYEVDFWGGRQAAYRSALESLKA SEYDRATVELTLLSGVANSYLQVLALREQQRIARLNLDNAEHVLRLVETRHAAGSATA LEVAQQSSLVASQRKQLPLLEQQAHEALITLATLIGEPVQALQVAERPFDSLRWPETG AGLPSELLSRRPDIANAEAQLAAAQADVQVARAALFPKLTLSASLSSGANRAADTFRN PYYNLGANLLAPIFNHGRLRAERDRSLARQEELLETYRKAILTAFADTERSLNSIDGL DRQLHWQQQELEQAQRAFDLSDSRYQAGAETLLTVLETQRTLYAAQDAAVQLRLARLQ ASVGLYKALGGGWQSDRQGLARKD" misc_feature 2645333..2646688 /gene="opmQ" /locus_tag="PA2391" /note="efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; Region: outer_NodT; TIGR01845" /db_xref="CDD:273830" gene complement(2646776..2648410) /gene="pvdP" /locus_tag="PA2392" /db_xref="GeneID:882224" CDS complement(2646776..2648410) /gene="pvdP" /locus_tag="PA2392" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyoverdine biosynthesis protein PvdP" /protein_id="NP_251082.1" /db_xref="GeneID:882224" /translation="MTVSRRGFMAGLALTGAAALPVAYYTHRHLTREEEPQTPDEASL DLAATDGIRLGDRLRGLWDLRLVGGDAELPGLPREGLQLVLDVAPKGRGLIGYLDTPE RLLAAEPPRFRVLGDLLGASSASIRWRLVDQASGSVAPTHDCSAVFDEVWADYANAGD GTLSGRIQRLERSPLSPNEDFRFVAVKRHFPLAHERIVLNEKLLGWLVSPQHRLFHQL WHASRDKWHRLSEKQRNALRGVGWQPGPLDRERDARGPRKDRNASGIDFFFMHRHMLH TARSMQDLPSWERLPRPVVPLEYDRPGFIRYFDNPDGFSVPPAWVAVDDDEYSEWLHG LKSAEAYHANFLVWESQYQDPAYLAKLTLGQFGSELELGMHDWLHMRWASVTRDPSNG APVMTDRFPADFAPRWFRPENDFLGDPFSSHVNPVFWSFHGWIDDRIEDWYRAHERFH PGEVQRREVEGIQWFAPGRWVEVGDPWLGPATHGCGLSDVQASSNSVELDVETMKLAL RIIFSEEDQLSGWLKRAPRRPWYARNLKLARDQLRR" gene 2648626..2649972 /locus_tag="PA2393" /db_xref="GeneID:882216" CDS 2648626..2649972 /locus_tag="PA2393" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="dipeptidase" /protein_id="NP_251083.1" /db_xref="GeneID:882216" /translation="MTRTRTRKALYLGLPIFLILVGGGLLAWKTFGPSEAGYPRKVMK HAEELHERILSFDSRITIPPDFGTEGNEFDKDGPNQLDLVKAGRGRLSGAALAIFGWP EMWNGPNAPHKPTPGFVDEARHQQEIRYKILTGMVRDFPNQVGIAYSPEDFRRLAMEG KFAIVMSMLNAYPLGDDLSQLDKWAARGVRMFGFNYVGNNDWSDSSRPLPFFNDTADA LGGLSPLGKQAVERLNDLGVIIDVSQMSTKALEQVAALSRAPIVASHSAPRALVDIKR NLSDHEMQLIKDSGGVIQVVGFPAYLRPLSKPTLDKLNALRARFDLPPLEGLDYALMP GDPIITIWPEQRFGEYASALYGILEEEPKAGLKELVDAIDYTVKKVGIDHVGISSDFN DGGGVDGWKDVSEIRNVTAELITRGYSDADIAKLWGGNFLRAWGEVQKRAKPTATP" misc_feature 2648770..2649936 /locus_tag="PA2393" /note="Membrane dipeptidase (Peptidase family M19); Region: Peptidase_M19; pfam01244" /db_xref="CDD:395996" misc_feature order(2648800..2648802,2648806..2648808,2648920..2648922, 2649130..2649132,2649355..2649357,2649418..2649420, 2649451..2649453,2649793..2649795,2649805..2649807) /locus_tag="PA2393" /note="active site" /db_xref="CDD:238626" misc_feature order(2648923..2648925,2648959..2648967,2648971..2648976, 2648983..2648985,2648995..2648997,2649160..2649165, 2649169..2649174,2649181..2649186) /locus_tag="PA2393" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238626" gene 2649995..2651278 /gene="pvdN" /locus_tag="PA2394" /db_xref="GeneID:882202" CDS 2649995..2651278 /gene="pvdN" /locus_tag="PA2394" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyoverdine biosynthesis protein PvdN" /protein_id="NP_251084.1" /db_xref="GeneID:882202" /translation="MNDRRTFLKQAGILAAGLPLLSAAQSLRAEGVPSDAGNKWKALR QQFDLDPQYLHFANFLLTSHPRPVREAIERLRVRFDRNPGEAVDWHREEIWKYEDEAR AWAGRYFAVQPGQVALTGSTTDGLAAIYGGLLVQPGKEILTSSHEHYSTYTTLEYRHK RMGTQVREFPLFKDPHRVSADEILSSIAAQIRPQTRVLGMTWVQSGSGVKLPIREIGK LVRELNQKRDEQDRIIYVVDGVHGFGVEDVSFADFDCDYFIAGTHKWLFGPRGTGVII ARSEQLQEHLVPSIPTFSRADNFGTLMTPGGYHAFEHRLALGTAFELHLQLGKAEVQA RIHQLNAYLKQRLGEHPKVRLVTPTSPELSSGFTFFRVEGRDCEAVAKHLMAHRVISD AVDRDVGPVVRLAPSLLNDEAEIDRVLEILAPQLA" misc_feature 2650115..2651263 /gene="pvdN" /locus_tag="PA2394" /note="Selenocysteine lyase/Cysteine desulfurase [Amino acid transport and metabolism]; Region: CsdA; COG0520" /db_xref="CDD:440286" gene 2651307..2652161 /gene="pvdO" /locus_tag="PA2395" /db_xref="GeneID:882188" CDS 2651307..2652161 /gene="pvdO" /locus_tag="PA2395" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyoverdine biosynthesis protein PvdO" /protein_id="NP_251085.1" /db_xref="GeneID:882188" /translation="MHALSPLALAALIVATAPAFADEAKKPGTVFKDCKDCPEMVVLP AGSFTMGTPDDEVGRQPDEGPLHDVTFAKPFAISRYQVTAGELDAYLKATGVKLADGD TRPGRECIAGKPRYQQGPRQPAVCVDYNDVKNYAAWLSKKTGKRYRMLSEAEREYGAR AGSAGPFPFPFDEGKEYSIAKHANTYGASDGYNFTSPVGSFPPNAFGVYDMHGNVYEW VADCWHDHYNGAPSDGSAWMEEKCELVQIRGNDWGEPPIFSRSGNRNNAAPSDRGDWI GFRVAREL" misc_feature 2651412..2652152 /gene="pvdO" /locus_tag="PA2395" /note="Sulfatase-modifying factor enzyme 1; Region: FGE-sulfatase; pfam03781" /db_xref="CDD:397722" gene complement(2652230..2653057) /gene="pvdF" /locus_tag="PA2396" /db_xref="GeneID:878624" CDS complement(2652230..2653057) /gene="pvdF" /locus_tag="PA2396" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyoverdine synthetase F" /protein_id="NP_251086.1" /db_xref="GeneID:878624" /translation="MTKRKLAYIWSLRNAAADKAGQYVPYKGEQRYMKSVLESLVEAL NQTALGDAYELVGVIYDDDAELPRDQGKIKDYGFAYRPGQQWFYPADLQVQGKTLNDL LLSVPSTYRRYPRGTPEHVAGKSDFERRLHDTLVELGADVVVLDGLLVILDELVRPGA PFARRIMNIHPGVTREDSPYERRGAYATLDALYGARGEKVVDWATMEKVAVEPLYWTG ASFHYVDNGIDSGEVFHDVLKTEISPDDTILELRWNNFNNSLFPALHEGLALLAEKL" misc_feature complement(2652305..>2652694) /gene="pvdF" /locus_tag="PA2396" /note="Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]; Region: PurN; COG0299" /db_xref="CDD:440068" protein_bind complement(2653183..2653193) /experiment="Beta-gal reporter assay [PMID: 11222621]" /experiment="EMSA [PMID: 11222621]" /experiment="In-vitro transcription [PMID: 11222621]" /experiment="Site directed mutagenesis [PMID: 11222621]" /note="Transcription factor binding site for NP_251116.; Evidence of regulation for: PA2397" /bound_moiety="PvdS" protein_bind complement(2653220..2653230) /experiment="Beta-gal reporter assay [PMID: 11222621]" /experiment="EMSA [PMID: 11222621]" /experiment="In-vitro transcription [PMID: 11222621]" /experiment="Site directed mutagenesis [PMID: 11222621]" /note="Transcription factor binding site for NP_251116.; Evidence of regulation for: PA2396" /bound_moiety="PvdS" gene 2653435..2655084 /gene="pvdE" /locus_tag="PA2397" /db_xref="GeneID:877645" CDS 2653435..2655084 /gene="pvdE" /locus_tag="PA2397" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyoverdine biosynthesis protein PvdE" /protein_id="NP_251087.1" /db_xref="GeneID:877645" /translation="MTNPKRGAIRELLALLRPFRAIVAVSIALGMAGGLAITLLLASI NNALHSENGLGQGVLLSFGGLCLLALVSSIVSDIGTSYVGQHIIAKLRKELGEKVLSA PIEQIERYRTHRLIPVLTHDIDTISDFSFSFTPLAIALTITFGCLGYLAYLSVPMFLL TVVAIVIGTAAQYLARSRGFKGFYAARDLEDELQKHYTAIASGAKELRIHRPRRYRMH TGRISETANNIRDLHISSINIFILAKTFGSMLFFVVIGLALTLQAYWPSSNPAAITGF VMVLLYMKGPLEQVVTILPIVSRAQVAFQRVAELSERFSSPEPHLLLSEQEAPDKTVD SLELRDVRYSPPAVEGSEPFHLGPINLRIAQGDIVFIVGENGCGKTTLIKLLLGLYRP QSGEILLNGEPVSAETRDDYRQLFSTIFADYYLFDDLVQGKQASLQNATQYLQRLEIA HKVSVMDGNFSTTDLSTGQRKRLALINAWLEERPVLVFDEWAADQDPAFRRVFYTELL PDLKRQGKTIIVISHDDRYFEMADQLIRLSAGKVVKETETA" misc_feature 2653447..2655081 /gene="pvdE" /locus_tag="PA2397" /note="cyclic peptide transporter; Region: cyc_pep_trnsptr; TIGR01194" /db_xref="CDD:130262" gene 2655187..2657634 /gene="fpvA" /locus_tag="PA2398" /db_xref="GeneID:878605" CDS 2655187..2657634 /gene="fpvA" /locus_tag="PA2398" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="ferripyoverdine receptor" /protein_id="NP_251088.1" /db_xref="GeneID:878605" /translation="MPAPHGLSPLSKAFLMRRAFQRRILPHSLAMALSLPLAGYVQAQ EVEFDIPPQALGSALQEFGRQADIQVLYRPEEVRNKRSSAIKGKLEPNQAITELLRGT GASVDFQGNAITISVAEAADSSVDLGATMITSNQLGTITEDSGSYTPGTIATATRLVL TPRETPQSITVVTRQNMDDFGLNNIDDVMRHTPGITVSAYDTDRNNYYARGFSINNFQ YDGIPSTARNVGYSAGNTLSDMAIYDRVEVLKGATGLLTGAGSLGATINLIRKKPTHE FKGHVELGAGSWDNYRSELDVSGPLTESGNVRGRAVAAYQDKHSFMDHYERKTSVYYG ILEFDLNPDTMLTVGADYQDNDPKGSGWSGSFPLFDSQGNRNDVSRSFNNGAKWSSWE QYTRTVFANLEHNFANGWVGKVQLDHKINGYHAPLGAIMGDWPAPDNSAKIVAQKYTG ETKSNSLDIYLTGPFQFLGREHELVVGTSASFSHWEGKSYWNLRNYDNTTDDFINWDG DIGKPDWGTPSQYIDDKTRQLGSYMTARFNVTDDLNLFLGGRVVDYRVTGLNPTIRES GRFIPYVGAVYDLNDTYSVYASYTDIFMPQDSWYRDSSNKLLEPDEGQNYEIGIKGEY LDGRLNTSLAYFEIHEENRAEEDALYNSKPTNPAITYAYKGIKAKTKGYEAEISGELA PGWQVQAGYTHKIIRDDSGKKVSTWEPQDQLSLYTSYKFKGALDKLTVGGGARWQGKS WQMVYNNPRSRWEKFSQEDYWLVDLMARYQITDKLSASVNVNNVFDKTYYTNIGFYTS ASYGDPRNLMFSTRWDF" misc_feature 2655388..2655540 /gene="fpvA" /locus_tag="PA2398" /note="Secretin and TonB N terminus short domain; Region: STN; smart00965" /db_xref="CDD:198033" misc_feature 2655478..2657631 /gene="fpvA" /locus_tag="PA2398" /note="Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]; Region: FhuE; COG4773" /db_xref="CDD:443805" gene complement(2657798..2665144) /gene="pvdD" /locus_tag="PA2399" /db_xref="GeneID:879750" CDS complement(2657798..2665144) /gene="pvdD" /locus_tag="PA2399" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyoverdine synthetase D" /protein_id="NP_251089.1" /db_xref="GeneID:879750" /translation="MQALIEKVGSLSPQERKALAVLLKQQGVNLFEIAPVFKRQDGEP LRLSYAQERQWFLWQLEPESAAYHIPSVLRLRGRLDLDALQRSFDSLVARHETLRTRF RLDGDEARQEIAASMALPLDIVALGPLEEGALARQVETTIARPFDLERGPLLRVSLLR LAEDDHVLVLVQHHIVSDGWSMQVMVEELVQLYAAYSRGLEVALPALPIQYADYALWQ RSWMEAGEKERQLAYWTGLLGGEQPVLELPFDRPRPVRQSHRGAQFILELDIDLSQAL RRVAQQEGATAFALLLASFQALLYRYSGQADIRVGVPIANRNRVETERLIGFFVNTQV LKADLDGRMGFDELLAQARQRALEAQAHQDLPFEQLVEALQPERSLSHNPLFQVLFNY QSEARGNGQAFRFDELQMESVQFDSRTAQFDLTLDLTDEEQRFCAVFDYATDLFDAST VERLAGHWRNLLRGIVANPRQRLGELPLLDAPERRQTLSEWNPAQRECAVQGTLQQRF EEQARQRPQAVALILDEQRLSYGELNARANRLAHCLIARGVGADVPVGLALERSLDML VGLLAILKAGGAYLPLDPAAPEERLAHILDDSGVRLLLTQGHLLERLPRQAGVEVLAI DGLVLDGYAESDPLPTLSADNLAYVIYTSGSTGKPKGTLLTHRNALRLFSATEAWFGF DERDVWTLFHSYAFDFSVWEIFGALLYGGCLVIVPQWVSRSPEDFYRLLCREGVTVLN QTPSAFKQLMAVACSADMATQQPALRYVIFGGEALDLQSLRPWFQRFGDRQPQLVNMY GITETTVHVTYRPVSEADLEGGLVSPIGGTIPDLSWYILDRDLNPVPRGAVGELYIGR AGLARGYLRRPGLSATRFVPNPFPGGAGERLYRTGDLARFQADGNIEYIGRIDHQVKV RGFRIELGEIEAALAGLAGVRDAVVLAHDGVGGTQLVGYVVADSAEDAERLRESLRES LKRHLPDYMVPAHLMLLERMPLTVNGKLDRQALPQPDASLSQQAYRAPGSELEQRIAA IWSEILGVERVGLDDNFFELGGHSLLATRVISRVRQEQQLDASLKALFERPVLEAFAQ GLERTTDAVSTIPLADRQQPLALSFAQERQWFLWQLEPESAAYHIPSALRLRGRLDVD ALQRSFDSLVARHETLRTRFRLEGGRSYQQVQPAVSVSIEREQFGEEGLIERIQAIVV QPFDLERGPLLRVNLLQLAEDDHVLVLVQHHIVSDGWSMQVMVEELVQLYAAYSQGLD VVLPALPIQYADYALWQRSWMEAGEKERQLAYWTGLLGGEQPVLELPFDRPRPARQSH RGAQLGFELSRELVEAVRALAQREGASSFMLLLASFQALLYRYSGQADIRVGVPIANR NRVETERLIGFFVNTQVLKADLDGRMGFDELLAQARQRALEAQAHQDLPFEQLVEALQ PERNASHNPLFQVLFNHQSEIRSVTPEVQLEDLRLEGLAWDGQTAQFDLTLDIQEDEN GIWASFDYATDLFDASTVERLAGHWRNLLRGIVANPRQRLGELPLLDAPERRQTLSEW NPAQRECAVQGTLQQRFEEQARQRPQAVALILDEQRLSYGELNARANRLAHCLIARGV GADVPVGLALERSLDMLVGLLAILKAGGAYLPLDPAAPEERLAHILDDSGVRLLLTQG HLLERLPRQAGVEVLAIDGLVLDGYAESDPLPTLSADNLAYVIYTSGSTGKPKGTLLT HRNALRLFSATEAWFGFDERDVWTLFHSYAFDFSVWEIFGALLYGGRLVIVPQWVSRS PEDFYRLLCREGVTVLNQTPSAFKQLMAVACSADMATQQPALRYVIFGGEALDLQSLR PWFQRFGDRQPQLVNMYGITETTVHVTYRPVSEADLKGGLVSPIGGTIPDLSWYILDR DLNPVPRGAVGELYIGRAGLARGYLRRPGLSATRFVPNPFPGGAGERLYRTGDLARFQ ADGNIEYIGRIDHQVKVRGFRIELGEIEAALAGLAGVRDAVVLAHDGVGGTQLVGYVV ADSAEDAERLRESLRESLKRHLPDYMVPAHLMLLERMPLTVNGKLDRQALPQPDASLS QQAYRAPGSELEQRIAAIWAEILGVERVGLDDNFFELGGHSLLLLMLKERIGDTCQAT LSISQLMTHASVAEQAACIEGQARESLLVPLNGRREGSPLFMFHPSFGSVHCYKTLAM ALRDRHPVKGVVCRALLGAGREVPEWDDMVAEYAEQLLQEHPEGVFNLAGWSLGGNLA MDVAARLEQRGRQVAFVGWIDAPAPVRVEAFWNEIGPTPEAVPNLSVGEMRVELLGVM FPERAEHIERAWSSICSATTDDEQRWTRMSDWAEAEIGAEFATLRSEIAQSNELEVSW ELKQILDERLKAMDYPRLTAKVSLWWAARSTNAIQRSAVERSMAEAIGAERVEPVRVL DTRHDKIIDHPEFVQSFRAALERAGR" misc_feature complement(<2658668..2665108) /gene="pvdD" /locus_tag="PA2399" /note="peptide synthase; Provisional; Region: PRK12467" /db_xref="CDD:237108" misc_feature complement(2657858..2658634) /gene="pvdD" /locus_tag="PA2399" /note="Thioesterase domain; Region: Thioesterase; pfam00975" /db_xref="CDD:395776" gene complement(2665156..2671629) /gene="pvdJ" /locus_tag="PA2400" /db_xref="GeneID:878178" CDS complement(2665156..2671629) /gene="pvdJ" /locus_tag="PA2400" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyoverdine biosynthesis protein PvdJ" /protein_id="NP_251090.2" /db_xref="GeneID:878178" /translation="MSFARLPIPQTRQEMDNLPLSYAQERQWFLWQLEPESSAYHIPT ALRLRGRLDIASLQRSFAALVERHESLRTRIARMGDEWVQVVSADVSLALEVEVQRGL DEQRLLERVEAEIARPFDLEQGPLLRVTLLEVDADEHVLVMVQHHIVSDGWSMQLMVE ELVQLYAAYSQGLDVVLPALPIQYADYALWQRSWMEAGEKERQLAYWTGLLGGEQPVI ELPLDHPRQPLRSYRGAQLDLELEPHLALALKQLVQRKGVTMFMLLLASFQALLHRYS GQADIRVGVPIANRNRVETERLIGFFVNTQVLKADINGRMGFDELLAQARQRALEAQA HQDLPFEQLVEALQPERSLGHNPLFQVMFNHQADSRSANQGVQLPGLSLERMEWRSSS VAFDLTLDVHEAEDGIWASFGYATDLFEASTVERLARHWQNLLRGIVAEPGRPVAELP LLLDEERDCLSRAWAENADEGGLPPLVQLQIQEQARLRPQAQALALEGQALSYAELNA RANRLAHCLIARGVGPDVLVGIAVERSLDMVVGLLAILKAGGAYVPLDPTYPQDRLRH MLEDSAVGLLLSQEHLLPGLPLHEGLEVLSIDRLERDASVSTDDPVVNLRPENLAYVI YTSGSTGKPKGVAISHAALAQFSRIASGYSALTPEDRILQFATLSFDGFVEQLYPALT RGACVVLRGGDLWDTGELYRQIVEQGVTLADLPTAYWNLFLLDALAEPRRSYGALRQI HIGGEAMPLEGPKLWRQAGMGRVRLLNTYGPTEATVVSSVFDCSAENARVGNASPIGQ ALPGRTLLVLDEHLGLLPVGPVGELYIASRAGLARAYHDRPGLTAERFLPDPFGEPGS RLYRTGDLARRRGDGVIEYMGRADHQVKIRGFRIELGEVEARLLDLEGIREAAALALD GQLVAYLVAEGGEDETRQPALRERIRTALRASLPDYMVPSHLLFLERMPLSPNGKLDR RALPKPDAGLMQRDHMAPASALEKDVAAIWGELLGVERVGLTDNFFELGGHSLLATRL VSRIRQDLGIEVSLKSLFEQPVLQGFVESLGEKPAEVPPITPVTREQPLPLSYAQERQ WFLWQLEPESAAYHIPAALRLRGGLDVVALQRSFERLAQRHESLRTRFRQEGLRTVQV VDADGQLQVSRHNLANVDDASLRAAVEAEMARPFDLRTDALLRISLFEVAPNDHVLVM VQHHIVSDGWSMQLMVEELVQLYAAYSQGREAALPALPIQYPDYAVWQREWMEAGERE RQLAYWIGLLGGEQPVLELPFDRPRPAEQSFRGARLEFELGAERARRLKALAQRQGAS TFMLLLASFQALLYRYSGQSDIRVGVPVANRNRVETERLIGFFVNTQVLKADIDGQMG FDRLLHQVRQRSLEAQAHQDLPFEQLVEALQPERSLSHSPLFQVLFNYQAERGEHGLP EVAGLSIEEQAWESHTAQFDLVLDTCESESDIWAALVYATDLFDASTAERLVRHWQNL LDAILAMPDARLGELDMLDREEREVIGQLWNRSDSGYPATPLVHQRVAERARMAPDAV AVIFDEEKLTYAELDNRANRLAHALIARGVGPEVRVAIAMQRSAEIMVAFLAVLKAGG AYVPLDIEYPRERLLYMMQDSRAHLLLTHSHLLERLPIPEGLSCLSVDREEEWAGFPA HDPEVALHGDNLAYVIYTSGSTGMPKGVAVSHGPLIAHIVATGERYEMTPEDCELHFM SFAFDGSHEGWMHPLINGARVLIRDDSLWLPERTYAEMHRHGVTVGVFPPVYLQQLAE HAERDGNPPPVRVYCFGGDAVAQASYDLAWRALKPKYLFNGYGPTETVVTPLLWKARA GDACGAAYMPIGTLLGNRSGYILDGQLNLLPVGVAGELYLGGEGVARGYLERPALTAE RFVPDPFGAPGSRLYRSGDLTRGRADGVVDYLGRVDHQVKIRGFRIELGEIEARLREH PAVREAVVVAQPGAVGQQLVGYVVAQEPAVADSPEAQAECRAQLKTALRERLPEYMVP SHLLFLARMPLTPNGKLDRKGLPQPDASLLQQVYVAPRSDLEQQVAGIWAEVLQLQQV GLDDNFFELGGHSLLATQVIGRLRERLHLEVPIKSMFTAETLGEFCHGVETLKAESAP VEDALAKSLEALKRLSADELEKLIS" misc_feature complement(<2665333..2671629) /gene="pvdJ" /locus_tag="PA2400" /note="peptide synthase; Provisional; Region: PRK12467" /db_xref="CDD:237108" protein_bind 2669355..2669367 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2400" /bound_moiety="AmrZ" gene complement(2671729..2687178) /locus_tag="PA2402" /db_xref="GeneID:878257" CDS complement(2671729..2687178) /locus_tag="PA2402" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="peptide synthase" /protein_id="NP_251092.1" /db_xref="GeneID:878257" /translation="MNAEDSLKLARRFIELPVEKRRVFLETLRGEGIDFSLFPIPAGV SSAERDRLSYAQQRMWFLWHLEPQSGAYNLPSAVRLNGPLDRQALERAFASLVQRHET LRTVFPRGADDSLAQAPLQRPLEVAFEDCSGLPEDEQEARLREEAQRESLQPFDLCEG PLLRVRLIRLGEERHVLLLTLHHIVSDGWSMNVLIEEFSRFYSAYATGAEPGLPALPI QYADYALWQRSWLEAGEQERQLEYWRGKLGERHPVLELPTDHPRPAVPSYRGSRYEFS IEPALAEALRGTARRQGLTLFMLLLGGFNILLQRYSGQTDLRVGVPIANRNRAEVEGL IGLFVNTQVLRSVFDGRTSVATLLAGLKDTVLGAQAHQDLPFERLVEAFKVERSLSHS PLFQVMYNHQPLVADIEALDSVAGLSFGQLDWKSRTTQFDLSLDTYEKGGRLYAALTY ATDLFEARTVERMARHWQNLLRGMLENPQASVDSLPMLDAEERGQLLEGWNATAAEYP LQRGVHRLFEEQVERTPTAPALAFGEERLDYAELNRRANRLAHALIERGVGADRLVGV AMERSIEMVVALMAILKAGGAYVPVDPEYPEERQAYMLEDSGVQLLLSQSHLKLPLAQ GVQRIDLDQADAWLENHAENNPGVELNGENLAYVIYTSGSTGKPKGAGNRHSALSNRL CWMQQAYGLGVGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKLVELI NREGVDTLHFVPSMLQAFLQDEDVASCTSLKRIVCSGEALPADAQQQVFAKLPQAGLY NLYGPTEAAIDVTHWTCVEEGKDAVPIGRPIANLACYILDGNLEPVPVGVLGELYLAG RGLARGYHQRPGLTAERFVASPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRG LRIELGEIEARLLEHPWVREAAVLAVDGKQLVGYVVLESEGGDWREALAAHLATSLPE YMVPAQWLALERMPLSPNGKLDRKALPAPEVSVAQAGYSAPRNAVERTLAEIWQDLLG VEQVGLDDNFFSLGGDSIVSIQVVSRARQAGLQLSPRDLFQHQNIRSLALAAKAGAAT AEQGPASGEVALAPVQRWFFEQSIPNRQHWNQSLLLQARQPLDGDRLGRALERLQAQH DALRLRFREERGAWHQAYAEQAGEPLWRRQAGSEEVLLALCEEAQRSLDLEQGPLLRA LLVDMADGSQRLLLVIHHLAVDGVSWRILLEDLQRLYADLDADLGPRSSSYQAWSRHL HEQAGARLDELDYWQAQLHDAPHALPCENPHGALENRHERKLVLTLDAERTRQLLQEA PAAYRTQVNDLLLTALARATCRWSGDASVLVQLEGHGREDLGEAIDLSRTVGWFTSLF PLRLTPAADLGESLKAIKEQLRGVPDKGVGYGLLRYLAGEEAATRLAALPQPRITFNY LGRFDRQFDGAALLVPATESAGAAQDPCAPLANWLSIEGQVYGGELSLHWSFSREMFA EATVQRLVDDYARELHALIEHCLDPRHRGVTPSDFPLAGLSQTQLDELSLDPDSVRDI YPLSPMQQGMLFHSLHGTEGDYVNQLRMDIGGLDPDRFRAAWQATLDAHEILRSGFLW KDGWPQPLQVVFEQATLELRLAPPGSDPQRQAEAEREAGFDPARAPLQRLVLVPLANG RMHLIYTYHHILMDGWSNAQLLAEVLQRYAGQEVAATVGRYRDYIGWLQSRDAKATES FWRDRLASLEMPTRLARQARTEQPGQGEHLRELDPQTTRQLASFAQGQKVTLNTLVQA AWALLLQRHCGQETVAFGATVAGRPAELPGIEAQIGLFINTLPVIAAPQPQQSVADYL QGMQALNLALREHEHTPLYDIQRWAGHGGEALFDSILVFENFPVAEALRQAPADLEFS TPSNHEQTNYPLTLGVTLGERLSLQYVYARRDFDAADIAELDRHLLHLLQRMAETPQA ALGELALLDAGERQEALRDWQAPLEALPRGGVAAAFAHQAASAPEAIALVCGDEYLSY AELDMRAERLARGLRARGVAAEALVAIAAERSFDLVVGLLGILKAGAGYLPLDPNYPA ERLAYMLRDSGARWLICQETLAERLPCPAEVERLPLETAAWPASADTRPLPEVAGETL AYVIYTSGSTGQPKGVAVSQAALVAHCQAAARTYGVGPGDCQLQFASISFDAAAEQLF VPLLAGARVLLGDAGQWSAQHLADEVERHAVTILDLPPAYLQQQAEELRHAGRRIAVR ACILGGEAWDASLLTQQAVQAEAWFNAYGPTEAVITPLAWHCRTQEGGAPAIGRALGA RRACILDAALQPCAPGMIGELYIGGQCLARGYLGRPGQTAERFVADPFSGSGERLYRT GDLARYRVDGQVEYLGRADQQIKIRGFRIEIGEIESQLLAHPYVAEAAVVALDGVGGP LLAAYLVGRDAMRGEDLLAELRTWLAGRLPAYMQPTAWQVLSSLPLNANGKLDRKALP KVDAAARRQAGEPPREGLERSVAAIWEALLGVEGIARDEHFFELGGHSLSATRVVSRL RQDLELDVPLRILFERPVLADFAASLESQAASAAPVLQILPRVAELPLSHAQQRMWFL WKLEPESAAYHLPSVLHVRGVLDQAALQQAFDWLVLRHETLRTRFEEVDGQARQTILA NMPLRIVLEDCAGASEATLRQRVAEEIRQPFDLARGPLLRVRLLALAGQEHVLVITQH HIVSDGWSMQVMVDELLQAYAAARRGEQPTLAPLTLQYADYAAWHRAWLDSGEGARQL DYWRERLGAEQPVLELPADRVRPAQASGRGQRLDMALPVSLSEELLACARREGVTPFM LLLASFQVLLKRYSGQSDIRVGVPIANRNRAEVERLIGFFVNTQVLRCQVDAGLAFRD LLGRVREAALGAQAHQDLPFEQLVDALQPERNLSHSPLFQVMYNHQSGERQDAQVDGL HIESFAWDGAAAQFDLALDTWETPDGLGAALTYATDLFEARTVERMARHWQNLLRGML ENPQASVDSLPMLDAEERGQLLEGWNATAAEYPLQRGVHRLFEEQVERTPTAPALAFG EERLDYAELNRRANRLAHALIERGVGADRLVGVAMERSIEMVVALMAILKAGGAYVPV DPEYPEERQAYMLEDSGVQLLLSQSHLKLPLAQGVQRIDLDQADAWLENHAENNPGIE LNGENLAYVIYTSGSTGKPKGAGNRHSALSNRLCWMQQAYGLGVGDTVLQKTPFSFDV SVWEFFWPLMSGARLVVAAPGDHRDPAKLVALINREGVDTLHFVPSMLQAFLQDEDVV SCTSLKRIVCSGEALSADAQQQVFAKLPQAGLYNLYGPTEAAIDVTHWSCVEEGKDAV PIGRPIANLGCYILDGDLEPVPVGVLGELYLAGRGLARGYHQRPGLTAERFVASPFVA GERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLA VDSRQLVGYVVLESEGGDWREALAAHLATSLPEYMVPAQWLALERMPLSPNGKLDRKA LPRPQAAAGQTHVAPQNEMERRIAAVWADVLKLEEVGATDNFFALGGDSIVSIQVVSR CRAAGIQFTPKDLFQQQTVQGLARVARVGAAVQMEQGPVSGETVLLPFQRLFFEQPIP NRQHWNQSLLLKPREALNAKALEAALQALVEHHDALRLRFHETDGTWHAEHAEATLGG ALLWRAEAVDRQALESLCEESQRSLDLADGPLLRSLLVDMADGGQRLLLVIHHLVVDG VSWRILLEDLQRAYQQSLRGEAPRLPGKTSPFKAWAGRVSEHARGESMKAQLQFWREL LEGAPAELPCEHPQGALEQRFATSVQSRFDRSLTERLLKQAPAAYRTQVNDLLLTALA RVVCRWSGASSSLVQLEGHGREELFADIDLSRTVGWFTSLFPVRLSPVADLGESLKAI KEQLRAIPDKGLGYGLLRYLAGEESARVLAGLPQARITFNYLGQFDAQFDEMALLDPA GESAGAEMDPGAPLDNWLSLNGRVFDGELSIDWSFSSQMFGEDQVRRLADDYVAELTA LVDFCCDSPRHGATPSDFPLAGLDQARLDALPVALEEVEDIYPLSPMQQGMLFHSLYE QASSDYINQMRVDVSGLDLPRFRAAWQSALDRHAILRSGFAWQGELQQPLQIVYRQRQ LPFAEEDLSQAANRDAALLALAAAERERGFELQRAPLLRLLLVKTAEGEHHLIYTHHH ILLDGWSNAQLLSEVLESYAGRSPEQLRDGRYSDYIAWLQRQDAAATEAFWREQMAAL DEPTRLVEALAQPGLTSANGVGEHLREVDATATARLRDFARRHQVTLNTLVQAGWALL LQRYTGQHTVVFGATVSGRPADLPGVENQVGLFINTLPVVVTLAPQMTLDELLQGLQR QNLALREQEHTPLFELQRWAGFGGEAVFDNLLVFENYPVDEVLERSSAGGVRFGAVAM HEQTNYPLALALGGGDSLSLQFSYDRGLFPAATIERLGRHLTTLLEAFAEHPQRRLVD LQMLEKAELSAIGAIWNRSDSGYPATPLVHQRVAERARMAPDAVAVIFDEEKLTYAEL DSRANRLAHALIARGVGPEVRVAIAMQRSAEIMVAFLAVLKAGGAYVPLDIEYPRERL LYMMQDSRAHLLLTHSHLLERLPIPEGLSCLSVDREEEWAGFPAHDPEVALHGDNLAY VIYTSGSTGMPKGVAVSHGPLIAHIVATGERYEMTPEDCELHFMSFAFDGSHEGWMHP LINGARVLIRDDSLWLPERTYAEMHRHGVTVGVFPPVYLQQLAEHAERDGNPPPVRVY CFGGDAVAQASYDLAWRALKPKYLFNGYGPTETVVTPLLWKARAGDACGAAYMPIGTL LGNRSGYILDGQLNLLPVGVAGELYLGGEGVARGYLERPALTAERFVPDPFGAPGSRL YRSGDLTRGRADGVVDYLGRVDHQVKIRGFRIELGEIEARLREHPSVREAVVVAQPGA VGQQLVGYVVAQAPAVADSPEAQAECRAQLKTALRERLPEYMVPSHLLFLARMPLTPN GKLDRKGLPQPDASLLQQVYVAPRSDLEQQVAGIWAEVLQLQQVGLDDNFFELGGHSL LAIQVTARMQSEVGVELPLAALFQTESLQAYAELAAAQTSSNDTDFDDLREFMSELEA I" misc_feature complement(2671732..2687178) /locus_tag="PA2402" /note="peptide synthase; Provisional; Region: PRK12316" /db_xref="CDD:237054" gene 2687497..2688708 /locus_tag="PA2403" /db_xref="GeneID:878268" CDS 2687497..2688708 /locus_tag="PA2403" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251093.1" /db_xref="GeneID:878268" /translation="MSKKSRSRLWFLVHSWLALPIWFFVLIVCVTGTLAVVSQEIVWL ANPDVRASKPYEDAEPLSFSQVLKAINEAQPDLLVESIQRPDEEHFALTAEVSYPGGS EATLYINPYTGAIQGESPSFDFRQFTRALHGWWLVPFNNGYSWGWYMVSLLGLPMLAS LITGLVVYKRFWKGFLKPRLRINQGARIFWGDFHRLSGIWSIWFIALISITGTWFLIQ AILADNHVTLTNDGIPPVIARADVPRAAPGQKVPYIELDEAVRLVTGRIPSLEASAVF LPGNAYSPMFVAGRGWYPLMFQSAALNPYTGKIETTRLLSDRTPLQFVTESMRPLHTG DFGGIWVKLIWFVFGLLLSMMVLSGLLIWSKRTAQATAALVKRGKRPARQPKPAKPAP VMANQTAEGQP" misc_feature 2687506..2688642 /locus_tag="PA2403" /note="PepSY-associated TM region [Function unknown]; Region: PiuB; COG3182" /db_xref="CDD:442415" gene 2688705..2689244 /locus_tag="PA2404" /db_xref="GeneID:879521" CDS 2688705..2689244 /locus_tag="PA2404" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251094.1" /db_xref="GeneID:879521" /translation="MSKAAVAQPVSPLRQFWLRWRFHLNVLLILIPLGFMPRYFADMA LFSGSSGLGEREIGEVQVGPWSLKLAEWRIEPPHDEGPAGFMKDFNAALCQACIPQVK ATYLRIGKPRSLRAAGVIFFGSPYRMGTSVPIPPRTRPDAELWITMEGWDGSMHQASI PLAEASPATVAWLNKRGKQ" gene 2689241..2689570 /locus_tag="PA2405" /db_xref="GeneID:878222" CDS 2689241..2689570 /locus_tag="PA2405" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251095.1" /db_xref="GeneID:878222" /translation="MSIHTRPWRLPLAALLLGLSGAALAHNPICECEEVQAGEIRCKG GFSDGSGAPGVTLDVIGYDEQILVPGKLGADSTLTFKRPDGEFYVLFDAGPGHVVEID HADIAAP" gene 2689567..2690127 /locus_tag="PA2406" /db_xref="GeneID:879584" CDS 2689567..2690127 /locus_tag="PA2406" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251096.1" /db_xref="GeneID:879584" /translation="MSVETVRPAGAGHETLYVLLGSVLILALAATVVGLRQQSHEAQA LDAHQVDARLDLNAAEQGIYADLQVAAEDIQARLDDGEAAPSVDELAAEGFPPFVADV AASSRGEHRWSHGETAGRPSYLGVSGKPEVAGSFLLLLGPAEVWLKPAAAAAGAVPGD ARALADAGWRQVVSRFDAGVTRQHRH" misc_feature 2689573..>2689905 /locus_tag="PA2406" /note="Family of unknown function (DUF6162); Region: DUF6162; pfam19659" /db_xref="CDD:437491" gene 2690160..2691113 /locus_tag="PA2407" /db_xref="GeneID:879560" CDS 2690160..2691113 /locus_tag="PA2407" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="adhesion protein" /protein_id="NP_251097.1" /db_xref="GeneID:879560" /translation="MLFSRRSSRPRGLAALLPGRALLAALLLALLAPLAQAEDGKRLR IGITLHPYYSYVSNIVGDKAEVVPLIPAGFNPHAYEPRAEDIKRIGTLDVVVLNGVGH DDFAERMIASSEKPGIPVIEANAKVPLLAATGMAARGAGKVVNPHTFLSISASITQVN TIARELGKLDPANAKAYTRNARAYAKRLRALRADALARLNKAPAADFRVATIHGAYDY LLREFGLEVTAVVEPAHGIEPSPSQLKKTIDQLKALDVKVIFSEIDFPSTYVETIQRE SGVKLYSLSHISYGDYSAGKYEEEMARNLDTVVRAIQESGA" misc_feature 2690277..2691098 /locus_tag="PA2407" /note="Metal binding protein AdcA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AdcA proteins belong to the TroA superfamily of helical backbone metal receptor...; Region: AdcA; cd01017" /db_xref="CDD:238499" misc_feature order(2690388..2690390,2690598..2690600,2690796..2690798, 2691021..2691023) /locus_tag="PA2407" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238499" gene 2691110..2691865 /locus_tag="PA2408" /db_xref="GeneID:879637" CDS 2691110..2691865 /locus_tag="PA2408" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_251098.1" /db_xref="GeneID:879637" /translation="MTVAERLCATPCGPVIEFAGIDLSLGGSRILDGVRLRVEAGSVH ALVGPNGGGKSSLVKTLLGQMPHRGELRLEWPGAPGCIGYVPQALEFDRGLPLTVDDF MAAMCQRRPAFLGLSRSRRPAIDAALERVGMLAKRGRRMGALSGGERQRVLLAQGLVP PPQLLVLDEPMSALDEGGIQVFERLLLDWRQAGVTVLWIEHDLEAVGRLADRVSGLNR HLLFDGPAASSLTPERLLTLFSTQPRKNAEASR" misc_feature 2691149..2691826 /locus_tag="PA2408" /note="ABC-type Mn2+/Zn2+ transport system, ATPase component [Inorganic ion transport and metabolism]; Region: ZnuC; COG1121" /db_xref="CDD:440738" gene 2691862..2692767 /locus_tag="PA2409" /db_xref="GeneID:879638" CDS 2691862..2692767 /locus_tag="PA2409" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_251099.1" /db_xref="GeneID:879638" /translation="MNDAYEQLRQAVQAWAAAGYLPETLAYGFVVNALLAGLLIGPVL GGLGTLVVVKRFAFFSEAVGHAALTGVAIGILLGEPYTGPYGSLFGYCLLFGVLLNYL RNRTGLAPDTLIGVFLSVSLALGASLLLVLAGKINVHILENVLFGSVLTVNGHDLAVL AAVAVLVPCLALPLYNRIMLASFNPQLAAVRGVAVKSLDYLFVALVTLVTVAAVKVIG AILVGALLVIPAAAARLVSQSLKGFFWLAVLIATVSTLAGILLPIMFDLPIPSGAAII LVAGLAFGLAAIARGCLPHLKGTPG" misc_feature 2691940..2692731 /locus_tag="PA2409" /note="ABC-type Mn2+/Zn2+ transport system, permease component [Inorganic ion transport and metabolism]; Region: ZnuB; COG1108" /db_xref="CDD:440725" gene 2692764..2693681 /locus_tag="PA2410" /db_xref="GeneID:879581" CDS 2692764..2693681 /locus_tag="PA2410" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251100.1" /db_xref="GeneID:879581" /translation="MNLKPHCLALALACAGLAGPLPALAATPAAAQSAPVTVLASLPV THALAERLLRDTEVKLQRVAPANLPASRQASFFAGRGAGGLAKAAGQADAVIDLRSIW SDDPLYPLARRSNIRIVEIDAARPVDGALPGIALRPGSDLHAYPWLNPTNLGRMADVL ASDLERLAPGAAATIQANLATLKKQLLEATASNETRLAKADNLSVISLSERLGYLLAG LNLDPLDVEIQADDGWTETNIQAFAEELKSEDIALVLHHRQPPKPLADAIAASGARLI VVDTEAADPVAGLESDMKAIVEGLLAGKG" misc_feature <2693091..2693603 /locus_tag="PA2410" /note="ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA [Inorganic ion transport and metabolism]; Region: ZnuA; COG0803" /db_xref="CDD:440566" gene complement(2693781..2694545) /locus_tag="PA2411" /db_xref="GeneID:879753" CDS complement(2693781..2694545) /locus_tag="PA2411" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="thioesterase" /protein_id="NP_251101.1" /db_xref="GeneID:879753" /translation="MGGTPVRLFCLPYSGASAMTYSRWRRKLPAWLAVRPVELPGRGA RMAEPLQTDLASLAQQLARELHDEVRQGPYAMLGHSLGALLACEVLYALRELGCPTPL GFFACGTAAPSRRAEYDRGFAEPKSDAELIADLRDLQGTPEEVLGNRELMSLTLPILR ADFLLCGSYRHQRRPPLACPIRTLGGREDKASEEQLLAWAEETRSGFELELFDGGHFF IHQREAEVLAVVECQVEAWRAGQGAAALAVESAAIC" misc_feature complement(2693832..2694542) /locus_tag="PA2411" /note="Surfactin synthase thioesterase subunit [Secondary metabolites biosynthesis, transport and catabolism]; Region: GrsT; COG3208" /db_xref="CDD:442441" gene complement(2694546..2694764) /locus_tag="PA2412" /db_xref="GeneID:878774" CDS complement(2694546..2694764) /locus_tag="PA2412" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251102.1" /db_xref="GeneID:878774" /translation="MTSVFDRDDIQFQVVVNHEEQYSIWPEYKEIPQGWRAAGKSGLK KDCLAYIEEVWTDMRPLSLRQHMDKAAG" misc_feature complement(2694552..2694764) /locus_tag="PA2412" /note="MbtH family protein, regulates adenylation domains of NRPSs [Secondary metabolites biosynthesis, transport and catabolism]; Region: MbtH; COG3251" /db_xref="CDD:442482" gene complement(2694842..2696251) /gene="pvdH" /locus_tag="PA2413" /db_xref="GeneID:882857" CDS complement(2694842..2696251) /gene="pvdH" /locus_tag="PA2413" /EC_number="2.6.1.76" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="diaminobutyrate--2-oxoglutarate aminotransferase" /protein_id="NP_251103.1" /db_xref="GeneID:882857" /translation="MHVATSVIEDQPLRATPAEGETLYEFSQSPLLERQSRQESNARS YPRRIPLALKKARGLLVEDVEGRTFIDCLAGAGTLALGHNHPVVIEAIRQVLADELPL HTLDLTTPVKDQFVQDLFGLLPPALAAEAKIQFCGPTGTDAVEAALKLVRTATGRSTI LSFQGGYHGMSQGALGLMGNLGPKKPLGAVLSTGVQFLPYPYDYRCPFGLGGEAGVKA NLHYLENLLNDPEGGVQLPAAVIVEVVQGEGGVVPADLDWLRGLRRITEQAGVALIVD EIQSGFARTGRMFAFEHAGIVPDVVVLSKAIGGSLPLAVVVYREWLDKWQPGAHAGTF RGNQMAMAAGSAVMRYLKEHDLAAHAAAMGERLAEHLRILQRDYPQLGDIRGRGLMLG VEIVDPQGEADALGHPPTDGALASRVQRECLRRGLILELGGRHGSVVRFLPPLIIGAE QIDEVARRFARALGAALAG" misc_feature complement(2694875..2696239) /gene="pvdH" /locus_tag="PA2413" /note="diaminobutyrate--2-oxoglutarate aminotransferase; Provisional; Region: PRK06938" /db_xref="CDD:235892" misc_feature complement(order(2695337..2695339,2695415..2695420, 2695424..2695426,2695523..2695525,2695742..2695744, 2695748..2695753,2695829..2695837)) /gene="pvdH" /locus_tag="PA2413" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99735" misc_feature complement(order(2695337..2695339,2695415..2695417, 2695424..2695426,2695523..2695525,2695748..2695753, 2695829..2695834)) /gene="pvdH" /locus_tag="PA2413" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature complement(2695337..2695339) /gene="pvdH" /locus_tag="PA2413" /note="catalytic residue [active]" /db_xref="CDD:99735" gene complement(2696430..2697749) /locus_tag="PA2414" /db_xref="GeneID:880254" CDS complement(2696430..2697749) /locus_tag="PA2414" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="L-sorbosone dehydrogenase" /protein_id="NP_251104.1" /db_xref="GeneID:880254" /translation="MASLHSLRPVALALGLALAGCNQGSQNDPQQQTGANPALPEPKH FLLPPMKVPEGVGWSGEAKPTVAQGLKIEKIADGLQHPRQLLVLPNGDVLVVEANSPG TAPVTTPKQLIAGMVKGKSGKAGKGGNRITLLRRAGAGGQWQKYVFLEGLDSPFGVQR VGDYLYVANTGNIMRYRYVPGETRVADPGMEFTDLPDTINHHWTKALLASPDGRKLYV GVGSNSNITENGAAIEYRRAAILEVDVASRGSRIYASGLRNPTGLQWEPVSGKLWTIV NERDEIGNDLVPDYLTSVREGGFYGWPYSYFGQHLDSRVKPQRPDLVAKAIVPDYALG SHVAALGLFFYTGNELPERYRNGAFVSEHGSWNRSPVSGFQVVHVPFADGKPAGAPQP VVTGFVSADEKQLFGAPVGLAQAADGALLIADDVGNAIWRVSAAGAD" misc_feature complement(2696448..2697569) /locus_tag="PA2414" /note="Glucose/arabinose dehydrogenase, beta-propeller fold [Carbohydrate transport and metabolism]; Region: YliI; COG2133" /db_xref="CDD:441736" gene complement(2697742..2698167) /locus_tag="PA2415" /db_xref="GeneID:882860" CDS complement(2697742..2698167) /locus_tag="PA2415" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251105.1" /db_xref="GeneID:882860" /translation="MATALRFRPLDAFYNVLNPVPFGFFVAALVFDATYFATAEVMWG KSAAWLISLGLLFAILPCIVDLCRVWLLRRAAVVAAARVSSLLKFAGIVLAIFNAFVH SRDAYAVMPAGLWLSIATVLLLALGEALLAVSAEEVAHG" misc_feature complement(<2697979..2698107) /locus_tag="PA2415" /note="Predicted membrane protein (DUF2231); Region: DUF2231; cl01730" /db_xref="CDD:470316" gene 2698526..2700163 /gene="treA" /locus_tag="PA2416" /db_xref="GeneID:882861" CDS 2698526..2700163 /gene="treA" /locus_tag="PA2416" /EC_number="3.2.1.28" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="trehalase" /protein_id="NP_251106.1" /db_xref="GeneID:882861" /translation="MPDRTALPRAMLAAWVLLLLAACSQGPAPTPPASWGWQDASGER AIAPDEAYPELFQAVQENRLFSDQKHFVDALPLREPARIRADYLRERERPGFDLRAFV GRNFEESGSVETAPPEAGADLASHISDLWPALTRHYEQVPAHSSLLPLPKPYVVPGGR FREVYYWDSYFTMLGLAESGQHQRVRDMLDNFAYLIDTYGHIPNGNRSYYLSRSQPPF FAYMVDLQARREGDAAYRRYLPQLQKEYAYWMEGSAGLRPNEARLHVVKLADGSLLNR YWDNRDTPRQESFLEDRATAARAPQRPAGEVYRDLRAGAESGWDFSSRWLDDGRELAS IRTTAIVPVDLNALLYHLERIIAKACASSALKACEQGYGARAEKRRQAIEDHLWHPAG YYADYDWQRRRPIERINAASLFPLFTGLASAERAGRTADSVAAQLLRPGGLATTTRAS GQQWDEPNGWAPLQWVAVQGLRAYGRDALAEDIGRRFLAQVQQVYDREGKLVEKYDIS GNQGGGGGGEYPLQDGFGWSNGVTLQLLRLYGPGAGR" misc_feature 2698526..2700160 /gene="treA" /locus_tag="PA2416" /note="alpha,alpha-trehalase TreA; Region: treA; PRK13272" /db_xref="CDD:183936" gene complement(2700167..2701105) /locus_tag="PA2417" /db_xref="GeneID:882837" CDS complement(2700167..2701105) /locus_tag="PA2417" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251107.1" /db_xref="GeneID:882837" /translation="MSGELVFDLNALFIYAKVVEHGGFAPAGRVLGIPKSTISRKVAQ LEARLGVRLVQRSTRQFQVTEIGQAYYRHCVAMTVEAEAAEDVIEQNRSEPCGMVRLT CSTPLLHFELAPMLARFMAQYPNVELYVKTFNRRVDVIAEGYDISLSLRFPPLEDSDL VMKVLARSPQVLVASPELLARYRPPELPADLSAMPYVGWERSRLDGSLRLVGADGSSA ALNLRPQLLSDDLGTLRQAVLEGVGIGGLPLCVVSRDLAERRLVRVLPEWTPVEGMVV AMFPSRRGLLPSVRALIDFLAAGFADAAQRQYPEPG" misc_feature complement(2700191..2701084) /locus_tag="PA2417" /note="LysR family transcriptional regulator; Provisional; Region: PRK14997" /db_xref="CDD:184959" gene 2701206..2702066 /locus_tag="PA2418" /db_xref="GeneID:880264" CDS 2701206..2702066 /locus_tag="PA2418" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="quercetin 2,3-dioxygenase" /protein_id="NP_251108.1" /db_xref="GeneID:880264" /translation="MKKVLGIYGNANRHWVGDGFPVRSLFSYNTLGQHISPFLLLDYA GPADFPPAQQRRGVGQHPHRGFETVTIVYQGEVEHHDSTGAGGRIGPGDVQWMTAASG ILHEEYHSERFRSTGGTLEMVQLWVNLPSSDKMNPPRYQTLLDADIPRVGLPDRAGEL RVIAGRYGRHQGPALTHSPLAVWDVQLKAGKHLALDLPKGHTCAVVVLRGTLAVGDEI VREAQVALLDRDDPRLELEANNDVQLLVLSGEPLDEPIIGYGPFVMSSREEIDQAIED FENGRFIRAH" misc_feature 2701242..2702036 /locus_tag="PA2418" /note="Redox-sensitive bicupin YhaK, pirin superfamily [General function prediction only]; Region: YhaK; COG1741" /db_xref="CDD:441347" gene 2702164..2702844 /locus_tag="PA2419" /db_xref="GeneID:880257" CDS 2702164..2702844 /locus_tag="PA2419" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_251109.1" /db_xref="GeneID:880257" /translation="MSAPANFNGQTPKIDPANAAMLLIDHQSGLFQTVKDMPMTELRA NATTLAKVATLAKIPVITTASVPQGPNGPLIPEIHEAAPHAQYVARKGEINAWDNPEF VAAVKATGKKQLIIAGTITSVCMAFPSIAAVHDGYQVFAVIDASGTYSKMAQEITLAR VVQAGVVPMDTAAVCSEIQRTWNRDDAVQFAEAYSAVFPHYQLLIESYAKAQAVVNNH EQLDSQRK" misc_feature 2702221..2702703 /locus_tag="PA2419" /note="YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them; Region: YcaC_related; cd01012" /db_xref="CDD:238494" misc_feature order(2702236..2702238,2702431..2702433,2702533..2702535) /locus_tag="PA2419" /note="catalytic triad [active]" /db_xref="CDD:238494" misc_feature order(2702245..2702247,2702254..2702256,2702392..2702394) /locus_tag="PA2419" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238494" misc_feature 2702518..2702523 /locus_tag="PA2419" /note="conserved cis-peptide bond [active]" /db_xref="CDD:238494" gene 2702926..2704344 /locus_tag="PA2420" /db_xref="GeneID:878474" CDS 2702926..2704344 /locus_tag="PA2420" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="porin" /protein_id="NP_251110.1" /db_xref="GeneID:878474" /translation="MPDSSMKRGATLCLALAIGPGSTLADDSLGHRDNISTGLNQRQK AEMKVPPGFVEGSTLNGFIRNYYFARDNHDTPSRRDQREWAQGLMLSFRSGYTDTPIG IGLDAHAFYGLRLDGGGGSGGAGVLPLDSAGRPADSFSAAGAALKLRGLDSLLKIGDQ LLENPVIASGVSRMVPQSYRGVTLKNYHFRALELDAGFVEATRLRNQSGHSHLTSGYG NGTKGGIAADRESPHIAWLGASYSAPGGSQATLYSGRLEDIWNQHYLGLSQPWRLSSQ LTLTPWLHYYKTRDQGRSQLGRIDNDLYNAGLTLAGGGQSLSLSLQKVDGDTPFDFIA QNDRTFLYESNAMQYADFNGPGERSWKIQYQASLAFLAAPDWQFGAAYGRGQADLTRV DPDSAGYGYLYNPNGKNAQHWERDLSLRYAFPAGPAKGLSVTLRWATHRPGEGYTAPG NTRGNSSSDEYRVVVDYPIRLL" misc_feature 2703076..2704332 /locus_tag="PA2420" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene 2704377..2705297 /locus_tag="PA2421" /db_xref="GeneID:882989" CDS 2704377..2705297 /locus_tag="PA2421" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251111.1" /db_xref="GeneID:882989" /translation="MRAALLPTFGALSAALCLEAHADAVALPPLALGNTSFMDGVSRP GMLFELPLQYVRANNASDAGGHSVPGRQRVRGTTLLPHFAYLSQNTLLGAHYGAEVLL PLVRLDLDIDGGPDGRRTRQGDLIVSPLMLQWGPATLFGRPYWQRLNFVFSLPTGDYD KDAAINTGSNTWIFNPHYAFTWELGERLELSGRLHYAWISRNDDPSPRLGANDVQPGQ ALHANFSISYALDPHWRIGLAGYQLKQISADRIDDHRQADSREQVFGIGPGVMYSQGR QTLFANLYAESGARNRSEGNQLTLRYLLAF" misc_feature 2704377..2705294 /locus_tag="PA2421" /note="Sphingosine uptake channel SphA-related outer membrane channel [Cell wall/membrane/envelope biogenesis]; Region: SphA; COG4313" /db_xref="CDD:443454" gene 2705773..2706087 /locus_tag="PA2422" /db_xref="GeneID:882841" CDS 2705773..2706087 /locus_tag="PA2422" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251112.1" /db_xref="GeneID:882841" /translation="MAKPNDTSNPEVTESSPRFVPLLPTSQADMCPRSATLYVDTHAL PTHLFDNAKVRLRSAINILAMTRLLDEKEEPGGTLAYINGALLSLLSDALSEIEAGHP SL" gene 2706387..2707181 /locus_tag="PA2423" /db_xref="GeneID:882842" CDS 2706387..2707181 /locus_tag="PA2423" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251113.1" /db_xref="GeneID:882842" /translation="MLRERVRLRAVHRHIDSGQEPTLIGLAVQRACAIGDFVQGLAIA VLQALSVGFFRRRLRFPAGHSLLAQHPRAACLPAAPAEARQRTAQRRISPMHGHTQLA PHYFFRQQRLLRALLIDDQAWFVLDDFARLIEHSQPEQMLARLDDDQARRESLRSERG EDQAQWLISESGAYAALIYQQRGDGGELRRWLSGEVVPELRSATDDSGMPRYVKLRWE RQVVHMLDWQGKLWVNFSEMPDLLERQGEPMVQLGWRRWLRKLRPL" misc_feature 2706723..2706980 /locus_tag="PA2423" /note="BRO family, N-terminal domain; Region: Bro-N; smart01040" /db_xref="CDD:214989" gene complement(2707666..2720694) /gene="pvdL" /locus_tag="PA2424" /db_xref="GeneID:882838" CDS complement(2707666..2720694) /gene="pvdL" /locus_tag="PA2424" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="peptide synthase" /protein_id="NP_251114.1" /db_xref="GeneID:882838" /translation="MMDAFELPTTLVQALRRRAVQEPERLALRFLAEDDGEGVVLSYR DLDLRARSIAAALQAHAQLGDRAVLLFPSGPDYVAAFFGCLYAGVIAVPAYPPESARR HHQERLLSIIADAEPRLVLTTADLREPLLQMNAQLSAANAPQLLCVDQLDPAVAEAWD EPQVRPEHIAFLQYTSGSTALPKGVQVSHGNLVANEVLIRRGFGIGADDVIVSWLPLY HDMGLIGGLLQPIFSGVPCVLMSPRYFLERPVRWLEAISQYGGTVSGGPDFAYRLCSE RVAESALQRLDLSGWRVAFSGSEPIRQDSLERFAEKFAASRFDASSFFACYGLAEATL FVTGGQRGQGIPALAVDGEALARNRIAEGEGSVLMCCGRSQPEHAVLIVDAASGEVLG DDNVGEIWAAGPSIAHGYWRNPEASAKAFVERDGRTWLRTGDLGFLRDGELFVTGRLK DMLIVRGHNLYPQDIERTVESEVPSARKGRVAAFAVTVDGEEGIGIAAEIGRGVQKSV PAQELIDSIRQAVAEAYQEAPKVVALLNPGALPKTSSGKLQRSACRLRLEDGSLDSYA LFPGLQAVQEAQPPAGDDELLARIGEIWKARLGVAQVAPRDHFFLLGGNSIGAAQVVA QVRDSLGVALDLRQLFEAPTLQAFSATVARQLAAGLPAEAPMAHLPRGVDLPQSAAQQ RLWLTWQIDPQSAAYNIPGGLRLRGELDEAALRASFQRLVERHEALRTRFLERDGAAL QRIDERGEFAWQFVDLAALAEHERAAAAAQRREAEAQQPFDLEKGPLLRVSLVRLDEQ EHQLWVTLHHIVADGWSLNLLLDEFSRLYAEACGGQPADLAPLELHYAEFAAWQRQWL DAGEGARQLAYWRERLGDTAPVLELATDHPRTARQASPAARYSLRVDEALARAIREAA LDHEASVFMWLLAAFQALLHRHSGQGEIRIGVPSANRQRLETQGLVGFFINTLVLRGT PRARQPFAALLGEAREATLGAQANQDLPFDQVLAACGQGGQLFQVLFNHQQRDLSALR RLPGLLADELPWHSREAKFDLQLQSEEDARGRLTLNFDYAADLFDEASIRRFAAQYLE LLRQVAEDPQRCLGDIALVDAEQAAHLAEWGSAPCEPARAWLPELLERQLAQSAERVA LEWDGGSLGYAELHARANRLAHYLRDKGVGPDVRVAICAERSPQLLVGLLAIVKAGGA YVPLDPDYPSERLAYMLADSGVELLLTQAHLFERLPGAEGVTPICLDSLKLDNWPSQA PGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYTLDGDDVLMQKAPV SFDVSVWECFWPLVTGCRLVLAAPGEHRDPARLVELVRQFGVTTLHFVPPLLQLFIDE PGVAACGSLRRLFSGGEALPAELRNRVLQRLPAVALHNRYGPTETAINVTHWQCRAED GERSPIGRPLGNVVCRVLDAEFNLLPAGVAGELCIGGLGLARGYLGRPALSAERFVAD PFSAAGERLYRTGDRARWNADGVLEYLGRLDQQVKLRGFRIEPEEIQARLLAQPGVAQ AVVVIREGVAGSQLVGYYTGAVGAEAEAEQNQRLRAALQAELPEYMVPTQLMRLAQMP LGPSGKLDTRALPEPVWQQREHVEPRTELQRRIAAIWSEVLGLPRVGLRDDFFELGGH SLLATRIVSRTRQACDVELPLRALFEASELEAFCEQVRAAQAAGRTDSHGAIRRIDRE QPVPLSYSQQRMWFLWQLEPDSPAYNVGGLARLSGPLDVARFEAALQALVQRHETLRT TFPSVDGVPVQRVHGDGGLHMDWQDFSALDRDSRQQHLQTLADSEAHRPFDLESGPLL RVCMVKMAEREHYLVVTLHHIVTEGWAMDIFARELGALYEAFLDDRESPLEPLPVQYL DYSVWQREWLESGERQRQLDYWKAQLGNEHPLLELPGDRPRPPVQSHQGDLYRFDLSP ELAERVRRFNAARGLTMFMTMTATLAALLYRYSGQQDLRIGAPVANRIRPESEGLIGA FLNTQVLRCRLDGQMSVGELLEQVRQTVIDGQSHQDLPFDHLVEALQPPRSAAYNPLF QVMCNVQRWEFQQTRQLAGMTVEYIANDARATKFDLNLEVTDLDQRLGCCLTYSRDLF DEPRIARMAGHWQNLLEALLGDPQRRIAELPLFAAEERKQLLLAGTAGEAGLQDTLHG LFAARVAASPQAPALTFAGQTLSYAELDARSNRLARVLRSHGVGPEVRVGLALERSLE MVVGLLAILKAGGAYVPLDPEYPLERLQYMIEDSGVRLLLSHAALFEALGELPAGVAR WCLEEDGPALDAEDPAPLAALSGPQHQAYLIYTSGSTGKPKGVAVSHGEIAMHCAAVI ECFGMRAEDCELHFYSINFDAASERLLAPLLCGARVVLRAQGQWGAEEICELIRAEGV SILGFTPSYGSQLAQWLESQGRQLPVRMCITGGEALTGEHLQRIRQAFAPASFFNAYG PTETVVMPLACLAPERLEEGAASVPIGSVVGARVAYILDADLALVPQGATGELYVGGA GLARGYHERPALSAERFVPDPFAAEGGRLYRTGDLVRLCDNGQVEYVGRIDHQVKIRG FRIELGEIEARLLEHPQVREALVLALDSPSGKQLAGYVASAVAEQDEDAQAALREALK THLKQQLPDYMVPAHLLLLASLPLTANGKLDRRALPAPDPALNRQAYEAPRSVLEQQL AGVWREVLNVERVGLGDNFFELGGDSILSIQVVSRARQLGIHFSPRDLFQHQTVQSLA AVARHSQASQAEQGPVQGDSALTPIQHWFFDLPLARREHWNQALLLQPRQAIDLGLLR KSLQRLVEQHDALRLAFRQVDGEWLAQHRPLREQELLWHVPVQSFDECAELFAKAQRS LDLEQGPLLRAVLVDGPAGEQRLLLAIHHLVVDGVSWRVLLEDLQQVYRQFAEGAEPA LPAKTSAFRDWAGRLQAYAGSESLREELGWWQARLGGQPVEWPCDRPQGDNREALAES VSLRLDPQRTRQLLQQAPAAYRTQVNDLLLTALARVLCRWSGQPSTLVQLEGHGREAL FDDIDLTRSVGWFTSAYPLRLTPAQSPGESIKAIKEQLRAVPHKGLGYGVLRYLADPA VRQAMAALPTAPITFNYLGQFDQSFADALFQPLDQPTGPIHDEQAPLPNELSVDGQVY GGELVLRWTYSRERYDARTVNELAQAYLAELQALIEHCLEDGAGGLTPSDFPLAQLSQ AQLDALAVPAGEIEDVYPLTPMQEGLLLHTLLEPGTGIYYMQDRYRIDSPLDPERFAA AWQAVVARHEALRASFVWNAGETMLQVIHKPGRTRIEFLDWSELPEDGHEERLQALHK REREAGFDLLEQPPFHLRLIRLGEARYWFMMSNHHILIDAWCRGLLMNDFFEIYSALG ESRPANLPTPPRYRDYIAWLQRQDLEQSRRWWSESLRGFERPTLVPSDRPFLREHAGE SGGMIVGDRYTRLDAADGARLRELAQRYQLTVNTFAQAAWALTLRRFSGERDVLFGVT VAGRPVGMPEMQRTVGLFINSIPLRVQMPAAGQRCTVREWLNRLFERNLELREHEHLP LVAIQESSELPKGQPLFDSLFVFENAPVEVSVLDRAQSLNASSDSGRTHTNFPLTVVC YPGDDLGLHLSYDQRYFEAPTVERLLGEFKRLLLALADGFHGELEALPLLGEDERDFL LDGCNRSARDYPLEQGYVRLFEAQVAAHPQRIAASCLEQRWSYAELNRRANRLGHALR AAGVGIDQPVALLAERGLDLLGMIVGSFKAGAGYLPLDPGHPTQRLTRIVELSRTLVL VCTQACREQALALFDELGCVDRPRLLVWDEIQQGEGAEHDPQVYSGPQNLAYVIYTSG STGLPKGVMVEQAGMLNNQLSKVPYLELDENDVIAQTASQSFDISVWQFLAAPLFGAR VAIVPNAVAHDPQGLLAHVGEQGITVLESVPSLIQGMLAEERQALDGLRWMLPTGEAM PPELARQWLKRYPRIGLVNAYGPAECSDDVAFFRVDLASTESTYLPIGSPTDNNRLYL LGAGADDAFELVPLGAVGELCVAGTGVGRGYVGDPLRTAQAFVPHPFGAPGERLYRTG DLARRRADGVLEYVGRIDHQVKIRGFRIELGEIEARLHERADVREAAVAVQEGANGKY LVGYLVPGETPRSSADSPAGLMVEQGAWFERIKQQLRADLPDYMVPLHWLVLDRMPLN ANGKLDRKALPALDIGQMQNQAYQAPRNELEETLARIWAEVLKVERVGVFDNFFELGG HSLLATQIASRVQKALQRNVPLRAMFECTTVEELASYIESLAPSEISEQKAERLNDLM SKLEML" misc_feature complement(2707669..2720694) /gene="pvdL" /locus_tag="PA2424" /note="peptide synthase; Validated; Region: PRK05691" /db_xref="CDD:235564" gene complement(2720767..2721531) /gene="pvdG" /locus_tag="PA2425" /db_xref="GeneID:882840" CDS complement(2720767..2721531) /gene="pvdG" /locus_tag="PA2425" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyoverdine biosynthesis protein PvdG" /protein_id="NP_251115.1" /db_xref="GeneID:882840" /translation="MSPAVSLQLFCLPYSGASARLFRRWQPSLPGWIRLLPLELPGRG LRFGEALHTDAASLVAQLAGELQGTLDSASPYAFFGHSLGGLLAFELAHAMRRRGLEG PLALFLSGVSPPAENDVSGYRRAKADAELVAALRDYRGTPEAVLNDPSLMQMLLPVVR ADFLVTGSYRYQAHGPLDAALHLFGGREDSLRSAELLGWLHEAGGDFTLDLLDGQHFF IREQQGQLLRLLRRYAGQHLLRWHKDKVRGSMRAAS" misc_feature complement(2720818..2721528) /gene="pvdG" /locus_tag="PA2425" /note="Surfactin synthase thioesterase subunit [Secondary metabolites biosynthesis, transport and catabolism]; Region: GrsT; COG3208" /db_xref="CDD:442441" protein_bind 2721747..2721762 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA2426" /bound_moiety="LasR" protein_bind 2722008..2722020 /experiment="DNA-array expression analysis [PMID: 23382903]" /experiment="EMSA [PMID: 23382903]" /experiment="qRT-PCR [RNA] [PMID: 23382903]" /note="Transcription factor binding site for NP_250896.; Evidence of regulation for: PA2426" /bound_moiety="PA2206" protein_bind 2722073..2722091 /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA2426" /bound_moiety="Fur" gene 2722175..2722738 /gene="pvdS" /locus_tag="PA2426" /db_xref="GeneID:882839" CDS 2722175..2722738 /gene="pvdS" /locus_tag="PA2426" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="extracytoplasmic-function sigma-70 factor" /protein_id="NP_251116.1" /db_xref="GeneID:882839" /translation="MSEQLSTRRCDTPLLQAFVDNRTILVKIAARITGCRSRAEDVVQ DAFFRLQSAPQITSSFKAQLSYLFQIVRNLAIDHYRKQALEQKYSGPEEEGLNVVIQG ASPETSHINYATLEHIADALTELPKRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFM IRDALVHCRKVTAERQGDNVTHLSARR" misc_feature 2722217..2722702 /gene="pvdS" /locus_tag="PA2426" /note="extracytoplasmic-function sigma-70 factor; Validated; Region: PRK07037" /db_xref="CDD:180803" gene complement(2722755..2723222) /locus_tag="PA2427" /db_xref="GeneID:882847" CDS complement(2722755..2723222) /locus_tag="PA2427" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251117.1" /db_xref="GeneID:882847" /translation="MLPSPASSLSFPSPLERREADPYARCDRQRPACNESHEPAQERP EPVATCAFIEEERRRGDPTGLLYALGPRERGEPERVAEWLAALVHHFYLDGPVEPPRT TLGKERCETAPGLCRCCGQPFDFRHKRAALLLLGTHFAARAEAQAASVRRYRR" gene complement(2723309..2724223) /locus_tag="PA2428" /db_xref="GeneID:882843" CDS complement(2723309..2724223) /locus_tag="PA2428" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251118.1" /db_xref="GeneID:882843" /translation="MDSYGDTSGRIGRDWLDRHDEELEQELLDDELNLDELFGPEQED APGELSRRRYFRELFRLQRELVKLQNWVVHTGHKVVILFEGRDAAGKGGVIKRITQRL NPRVCRVAALPAPNDREQTQWYFQRYVSHLPAGGEIVLFDRSWYNRAGVERVMGFCND EQYEEFFRSVPEFEKMLARSGIQLLKYWFSISDAEQHLRFLSRIHDPLKQWKLSPMDL ESRRRWEAYTKAKETMLERTHIPEAPWWVVQADDKKRARLNCIHHLLQQMPYREVPQP PVHLPERLRHADYVRHPTPGEIIVPEVY" misc_feature complement(2723393..2724082) /locus_tag="PA2428" /note="polyphosphate kinase 2, PA0141 family; Region: PPK2_P_aer; TIGR03707" /db_xref="CDD:213852" gene 2724485..2724730 /locus_tag="PA2429" /db_xref="GeneID:882845" CDS 2724485..2724730 /locus_tag="PA2429" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251119.1" /db_xref="GeneID:882845" /translation="MQAFSKQQLIDALNAQSSDLATLQSLVMGLYLWIRDSHGQASVD AAFQRAREEARQFRQQSGNQADERLILHLAEIVREQP" gene complement(2724767..2725771) /locus_tag="PA2430" /db_xref="GeneID:882846" CDS complement(2724767..2725771) /locus_tag="PA2430" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251120.1" /db_xref="GeneID:882846" /translation="MNLLQGKWPRLATLLAVLVAAALVFLAWERYTRTPWTRDARVRA DVVTLSADVSGLITRLPLSDNQPVEKGELLLSIDPARYELAVLRAERAVNVARAALGE SRAAIEASQAQLRQRRSEAQRRSALQKRSMLSVEENEKAQTDVSLAQAELLRNQASLG LAQANVELAEAALQQARLDLERTQVRAPVSGYVTNLQTREGDYAHAGVPLLALVDRDS FYVSGYFEETKLPGIHVGSRARVELMSGERFDGRVQSIAHAITDRENAEGSRLLANIN PSYTWVKLAQRIPVRIAIDPAYRQRNTLRAGVTATIRVLPAEDTAKVDSAAPGTALRP " misc_feature complement(2724788..2725690) /locus_tag="PA2430" /note="p-hydroxybenzoic acid efflux pump subunit AaeA; Region: PRK10559" /db_xref="CDD:182548" gene complement(2725967..2728141) /locus_tag="PA2431" /db_xref="GeneID:882844" CDS complement(2725967..2728141) /locus_tag="PA2431" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251121.1" /db_xref="GeneID:882844" /translation="MEGLKFYARLLWRPPRETLLFALRTVAAGLLTLYLAFLFDLEQP KWALMTVVIVSQPLAGMALKRSFAQVLGTFAGAVVAVLIMALFAQQPLPFFVALGLWL ALCTAGGTLLRYTDSHAFVLSGFTAVIVAVLSIPDPENTFMLAVVRVTETLLGVACVA LVSLLSARPQAVAKGYFAQVDGLIRSTARHAAAVIRGDEGDESFNQRQMQLVASITAL DGLRRHLYFDAPNLRRADGLVQLLGNLLVLMASRLLLLRQHRLLVRAHWVGPLPADIQ ALLDRALRVLDALAEQGRAVPSEVLEEFQAVRQAFDAAATRAESYDEALSPALRPQVA ILRWEYARLFQRLGEVLELNDAIQSGRQASSFYRRGQAQALHLDWALASMNAVRAFVA LSCAAWLWITSAWNGALSSLLLVGVMCSLMATFPRPLLAAQNFLRGLLLAILISAALL FVLLPASADFEWLALWMALLLYVVAVGLSSPLSAGIAMGIGLETLLMVAPQNIAVYYS NASQWFEFVGGFLAAAVLAVLVFALVYPFRADPRLRRLLYLSRQDVAEMSRCEASEAQ RFAFETRMIDRLAVMVGLLPASQEPASAERFQCALGCVVMGVALNRLREPLHDAGVVP LELQPLLGEALREVAAYIAGGADAPRQDLALAALRRFGRGLEALLAQPSKDLGATRQR FIMNVAVLILQQSLQRYRTLLEEDRGAPAVVEEPEEEGGHAR" misc_feature complement(2726045..2728087) /locus_tag="PA2431" /note="Fusaric acid resistance protein family; Region: FUSC; pfam04632" /db_xref="CDD:428044" gene 2728542..2729456 /gene="bexR" /locus_tag="PA2432" /db_xref="GeneID:882852" CDS 2728542..2729456 /gene="bexR" /locus_tag="PA2432" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="bistable expression regulator BexR" /protein_id="NP_251122.1" /db_xref="GeneID:882852" /translation="MSLRFDDIEAFLNVAELNSVTSAAERMSLSKSVISKRVSDLERR LGVRLLYRTTRNVEPTEAGHFFYKAAKASLQELNNAAEIVALRENDLCGELRIVTPMS FGTLWLSPIIADFMSQHPRLEIVLQMDDRLTDFEKEGYDLSIRVTRLDDSSLIARPLA NSQRVVCCSPDYAERHGTLDTLEQLMQHECLGYNNATPSQVWTFEPAFPGAKPRAVSP RGRFSSNNGQAMRDAALRGQGLALLPLFIVAEDLKNGRLVDAAPGLRPLDDVIYAMYS RAAAMSPKVKAFIQHLQQALSIPPWGNG" misc_feature 2728554..2728733 /gene="bexR" /locus_tag="PA2432" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 2728818..2729417 /gene="bexR" /locus_tag="PA2432" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(2728848..2728850,2728860..2728862,2728977..2728979, 2729019..2729021,2729025..2729027,2729220..2729222, 2729271..2729273,2729352..2729354) /gene="bexR" /locus_tag="PA2432" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature order(2728851..2728856,2728866..2728871,2728875..2728880, 2728887..2728889,2728899..2728901,2728905..2728925, 2729106..2729108,2729202..2729216,2729235..2729240, 2729247..2729249) /gene="bexR" /locus_tag="PA2432" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 2729571..2729840 /locus_tag="PA2433" /db_xref="GeneID:882848" CDS 2729571..2729840 /locus_tag="PA2433" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251123.1" /db_xref="GeneID:882848" /translation="MIVRTLLIAAALLGGTAQAAESTDLCGANLQKLDDILAVRGKTS VTGARVTEVKELQAKARQDQASGDTKGCITATTQALQILQNAGKK" gene complement(2729976..2730521) /locus_tag="PA2434" /db_xref="GeneID:882851" CDS complement(2729976..2730521) /locus_tag="PA2434" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251124.1" /db_xref="GeneID:882851" /translation="MRQAQTRRNGWRWLALAVGTLSALSLAEASMARWPAGWQVSDLP AAQPGQAGAGQRQRAVKLQADGSQALVMEVTRMPLQSGQAVNLEKVLGHMRKLVQIEF LRNGLQTACTSPQPSTTGGLAALETTCTIRQRGAVVMKQTLLAAAGKTSAYSLSYAGL AEAYDASQAEIRAVRESLRFE" misc_feature complement(2729982..2730434) /locus_tag="PA2434" /note="Domain of unknown function (DUF4946); Region: DUF4946; pfam16304" /db_xref="CDD:435264" gene complement(2730518..2732503) /locus_tag="PA2435" /db_xref="GeneID:882849" CDS complement(2730518..2732503) /locus_tag="PA2435" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cation-transporting P-type ATPase" /protein_id="NP_251125.1" /db_xref="GeneID:882849" /translation="MSEPTAHGSHGGCAHHHHHLPFGGGLLSRDEQRRAARQLSLAML ALGLLLLGLAWRWLAADQAGVSQILLGVASLLVALPVARSAWDSLRHPSLHGVTDQLI ALAMLGAWASGDLLTAALLPIIMIFGHVLEERSVIGSQEAIAALGELTRSHARRIEAD GSLSEVDNASLRPGDQVEVRAGDRVPADGRVLQGQASLDTAPITGESVPLEVAPGMEV YGGAINLDGLLRIEITRTGEASTLGKVIGLMQQAERAKPPITRLLERYAGQYMLLVLL IAAVTWFVTNDAQAMLAVLVAACPCALVLSAPATAIAGIAVAARHGILIRSSAFLEEL ADLTSLVVDKTGTLTHGSLRLQALRLADAAEEASVLRLAASLGAASSHPVSRALAALA AHDAYHPLSDIRERQGFGVVARTAAGEAALGRPELFQQLGIDASEVPEHEGPIAGIAL DGRFLGWLLLADSVRAEAAEALADLRELGLGRQLLLTGDRRAVADAVAKQVGIRQLVA QALPEDKLRQVGAEIGSGFRPMVVGDGINDSLALKAGVVGVAMGAGGADIALASADIV LIGSDLRRLGTCVRLSRQCRRTLQVNVAIGLGWTLAIVAAAAFGLLGAAGAMVAALLH NLSTLLVLGNAGRLLRFEEPLGQPRPAVEGREEEGTP" misc_feature complement(2730584..2732212) /locus_tag="PA2435" /note="heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; Region: ATPase-IB2_Cd; TIGR01512" /db_xref="CDD:273665" gene complement(2732532..2732966) /locus_tag="PA2436" /db_xref="GeneID:882850" CDS complement(2732532..2732966) /locus_tag="PA2436" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251126.1" /db_xref="GeneID:882850" /translation="MTAGGIPFTGNGARLSPGRALLCGLALLLCGGEALARQLPSDML VGFVASAQYPVITLKKPKQSLLRSVLTLGLGKKTVSYSVAPSVRIRTAQNLFIVYGRM PQLKGSFVGLKSDNNGQVKQIWELTEKEALDYVRRPDARFPQ" gene complement(2733120..2734160) /locus_tag="PA2437" /db_xref="GeneID:882935" CDS complement(2733120..2734160) /locus_tag="PA2437" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251127.1" /db_xref="GeneID:882935" /translation="MSGEAREGLRSPWLQAGRLAFLALFGVTLLAALAWAFSNVRQIG PENRAVVLRLGALERLAGPGLLLAWPQPLEQVVLLPSAEQVIERRVEGLLRSEQARRA DLDVSLSSDALAGSGYLLTGDAGVVQLDVRVFYKVDDPYAYVLQGAHVLPALDRLVAR NAVQVCAARDLDTILVARPELLGNDSAVAERRERLRGDLVQGINHSLAALAAAGSGLG IQVVRVDVQSSLPRNAVSAFNAVLTASQLAEQNVAKARTEAEKLTQAATEGADRTLQL ARAEAGERLAQARRDTASIVGLAPALGATDAGLLWRLYRERVPAILGKAGSVGSVDPR DDGRLILQGGQP" misc_feature complement(2733177..2734085) /locus_tag="PA2437" /note="core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; Region: SPFH_like; cl19107" /db_xref="CDD:473137" gene complement(2734157..2735182) /locus_tag="PA2438" /db_xref="GeneID:882853" CDS complement(2734157..2735182) /locus_tag="PA2438" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251128.1" /db_xref="GeneID:882853" /translation="MSLGHSHSHSHHEHHHDHDHDHDHGHGAQAASPWRRLLVAALLV LFAVAAACLVQVRSGEAMVITRFGNPARVLLEPGLAWRLPLPFESAIPVDLRLRTTSS GLQDVGTRDGLRIIVQAYVAWQVQGDADNVQRFMRAVRNQPDEAARQLRTFVGSALET TASAYDLADLVNTEASRVRIGDFEARLREQIDHQLLATYGVKVVQVGIERLTLPKVTL GATVDRMRAERETIATERTAEGRRQAAEIRSAAERDARVIQAEASVKAAEIEAQARVE AARIYGKAYAGSPQLYNLLRSLDTLGTIVNGDTRLVLRTDAAPFRVLVDGPPALPAEA PANGRRP" misc_feature complement(2734247..2735029) /locus_tag="PA2438" /note="High frequency of lysogenization C (HflC) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; Region: SPFH_HflC; cd03405" /db_xref="CDD:259803" gene complement(2735194..2737194) /locus_tag="PA2439" /db_xref="GeneID:882936" CDS complement(2735194..2737194) /locus_tag="PA2439" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251129.1" /db_xref="GeneID:882936" /translation="MRVDLDAEGVAAESLPRFQQAPRQLRQLWRWAAASVALAAACAV LGFFIGLFAADSLWPPLLYNLGAAWLVLFAGLHAAYRVAAWRCVVLGAEASARPAWLR WQRDEPDATADSAYERLLERLGQAIAHGLAQLGHAALWLAASAALALCLVAAGWRLDL PPASSGQAADLAIGICLLLAFAVLVLERRLASQGPAQWPEAPVLGQLARALIGTLVLA ALCLFLARQGHPWAPRLAVLLGLLPAALALELLGRAILAMFAPQRAGLEPRLVATSLL ADLLRWPPRPLQRLQHELHQRFGIDLRQVWAFGFMRRAFLPVLAVVSLSGWLLSGVRE IGMDARGVYERFGKPVAVLGPGLHLGLPWPLGRVLAVENGVVHELATSVAAGDGGAEP LAPAEGPAPDSANRLWDASHVSEKSQVIASLADHRQSFQIVNMDVRIVYRIALDDASA LAATYRSADVPTLVRSTASRVLVHAFASRTLDEVLGEQRAGLAEQIGQAVQADLDRLG SGVEVLGAAVEAIHPPAGAANAYHAVQAAQITAQALIARERGQAAAQRNEAQLQASVA HDRASAQARETLAAAQAADRRFAAEREGYADAGQAFLLEAYYRQLGRGLGKANLLLID HRIAGAGAPTIDLRSFGLGRLDSPSSSRPSAAPASAAGQSAP" misc_feature complement(2735332..2736243) /locus_tag="PA2439" /note="High frequency of lysogenization K (HflK) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; Region: SPFH_HflK; cd03404" /db_xref="CDD:259802" protein_bind complement(2736618..2736630) /locus_tag="PA2439" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(2736675..2736687) /locus_tag="PA2439" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 2737882..2738844 /locus_tag="PA2440" /db_xref="GeneID:882929" CDS 2737882..2738844 /locus_tag="PA2440" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251130.1" /db_xref="GeneID:882929" /translation="MRSLIGMTFLNSSVGQRRLRQNGIVLRLGPVVADRRRATLPHRQ GHCLDRQDLETLLLWLQRHFLCVPLEHLLEGPAPACLRIALSVDGNPAELAEQVYPLL ERYEMPASAFIGGDPRSWREAVAETLWQADATAAGPLLELLEGYSGAALMAVFERTGD DQRRSRNLDLLLRKLERLDPASQQALHAACPVPAPYSAGDWERVRRLENSGLLRFGLR GQEPHPSAGLCAEDCLGRAHRQLQQHCAAPLPVFCQARTTPAAQPGLRAALGRLGYRF AFGARNGLVDTRCDPLDLPRIEVDAAIAARPGRLAWHIYRGARP" misc_feature 2738128..2738781 /locus_tag="PA2440" /note="Putative catalytic NodB homology domain of PgaB, IcaB, and similar proteins which consist of a deformed (beta/alpha)8 barrel fold with 5- or 6-strands; Region: CE4_NodB_like_5s_6s; cd10918" /db_xref="CDD:213023" gene 2738841..2739716 /locus_tag="PA2441" /db_xref="GeneID:882933" CDS 2738841..2739716 /locus_tag="PA2441" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251131.1" /db_xref="GeneID:882933" /translation="MSMASSPFPRRRDRQSPSAGRPPEPREANAPSPAMPQRRRSQGY GQPSWPGISKDRPMTADTPTSVATINHLLLGAPYTSPLVIPGDWLVDELEGAVEVGGF TDGLFRWPTRKRSGRPSPILCGDLLRAVRTECAESVQFWWGFSPSLVGRWRRALGVTR RNNPGDQAVARARAALARSLDRKAPPKAPAAWSSEEVEFIRRHGSKRSLAWCAYMLGR SYQSVASKAEELSPHSGRDRNNAIWSKSEEDLLRQHYQQRGSLWCAQQTGKTRAAVFH RAKKLGLQRQRPKHP" gene complement(2739762..2740883) /gene="gcvT2" /locus_tag="PA2442" /db_xref="GeneID:882934" CDS complement(2739762..2740883) /gene="gcvT2" /locus_tag="PA2442" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycine cleavage system protein T2" /protein_id="NP_251132.1" /db_xref="GeneID:882934" /translation="MTAETLAKTPLHALHLELGAKMVPFAGYDMPVQYPAGVLKEHLH TREQAGLFDVSHMGQIRLVGADVALALESLVPVDILDLPVGQQRYALFTDEQGGILDD LMVANLGDCLLLVVNAACKHQDLAHLRRHLEGRCSVEPLFEERALLALQGPAAVRVLE RLAPQVAQMTFMQFARVELLGQDCYVSRSGYTGEDGYEISVPAAHAEALARRLLAEPE VAPIGLGARDSLRLEAGLCLYGHDMDSATTPVEASLGWAISKARRADGVRAGGFPGAE RIFAQQAQGVASKRVGFLPQGRMPVREGAEIVDAQGRAIGKVSSGGFGPSLNAPLAMG YVPSELAGLGSEVTAMVRGKPVTLVVSKMPFVAQRYYRG" misc_feature complement(2739768..2740871) /gene="gcvT2" /locus_tag="PA2442" /note="glycine cleavage system aminomethyltransferase GcvT; Region: gcvT; PRK13579" /db_xref="CDD:237435" gene complement(2740977..2742353) /gene="sdaA" /locus_tag="PA2443" /db_xref="GeneID:882930" CDS complement(2740977..2742353) /gene="sdaA" /locus_tag="PA2443" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="L-serine dehydratase" /protein_id="NP_251133.1" /db_xref="GeneID:882930" /translation="MSLSVFDLFKIGIGPSSSHTVGPMRAAARFAEGLRREGLLEATA SIKVELYGSLGATGKGHGSDKAVLLGLEGEQPDTVDTAAIPARLDAIRSSGELRLLGE RPIRFVEKEHLALIRKPLAYHPNGMIFRAFDAAGLQVRSREYYSVGGGFVVDDEAAGL DRIVEDRTPLAFPFKTARQLLDHCAREGLSISQLMAENEKAWRPAEETRTGLLRIWQV MQDCVEAGCRNEGIMPGGLKVRRRAAALHRQLCQRPEAGLRDALSVLDWVNLYALAVN EENASGGRVVTAPTNGAAGIIPAVLHYYARFIPGADDDGVVRFLLTAAAIGILYKENA SISGAEVGCQGEVGVACSMAAGALCEVLGGSVQQVENAAEIGMEHNLGLTCDPVGGLV QVPCIERNAMASVKAINAARMALRGDGQHFISLDKVIRTMRQTGADMKSKYKETARGG LAVNIIEC" misc_feature complement(2740989..2742344) /gene="sdaA" /locus_tag="PA2443" /note="L-serine dehydratase, iron-sulfur-dependent, single chain form; Region: sda_mono; TIGR00720" /db_xref="CDD:273233" gene complement(2742401..2743657) /gene="glyA2" /locus_tag="PA2444" /db_xref="GeneID:882925" CDS complement(2742401..2743657) /gene="glyA2" /locus_tag="PA2444" /EC_number="2.1.2.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="serine hydroxymethyltransferase" /protein_id="NP_251134.1" /db_xref="GeneID:882925" /translation="MFSKHDQLQGYDDELLAAMDAEDRRQEDHIELIASENYASKRVM QAQGGGLTNKYAEGYPGKRYYGGCEHVDKVERLAIDRARQLFGADYANVQPHSGSSAN AAVYLALLNAGDTILGMSLAHGGHLTHGAKVSSSGKLYNAVQYGLDTATGLIDYDEVE RLAVEHKPKMIVAGFSAYSKTLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPI PFADVVTTTTHKTLRGPRGGLILARANEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCF KEALEPGFKDYQAQVIRNAKAMAEVFIGRGYDVVSGGTDNHLMLISLVKQGLTGKAAD AALGAAHITVNKNAVPNDPQSPFVTSGIRIGTPAVTTRGFREGECRELAGWICDILDD IDNPEVGERVRGQVGEFCRHFPVYAD" misc_feature complement(2742404..2743648) /gene="glyA2" /locus_tag="PA2444" /note="serine hydroxymethyltransferase; Reviewed; Region: glyA; PRK00011" /db_xref="CDD:234571" misc_feature complement(order(2742809..2742811,2742863..2742865, 2743241..2743246,2743349..2743351,2743370..2743372, 2743415..2743417,2743439..2743444,2743496..2743498, 2743550..2743552,2743565..2743567,2743592..2743597, 2743616..2743618,2743622..2743624)) /gene="glyA2" /locus_tag="PA2444" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:99733" misc_feature complement(order(2742569..2742571,2742950..2742952, 2742968..2742973,2743046..2743048,2743055..2743057, 2743130..2743132,2743280..2743282,2743361..2743366, 2743463..2743465,2743493..2743495,2743553..2743555)) /gene="glyA2" /locus_tag="PA2444" /note="glycine-pyridoxal phosphate binding site [chemical binding]; other site" /db_xref="CDD:99733" misc_feature complement(order(2742569..2742571,2742968..2742970, 2743280..2743282,2743553..2743555)) /gene="glyA2" /locus_tag="PA2444" /note="active site" /db_xref="CDD:99733" misc_feature complement(order(2742617..2742619,2742887..2742889, 2743277..2743279,2743283..2743285,2743295..2743297, 2743466..2743468,2743487..2743489)) /gene="glyA2" /locus_tag="PA2444" /note="folate binding site [chemical binding]; other site" /db_xref="CDD:99733" gene complement(2743800..2746679) /gene="gcvP2" /locus_tag="PA2445" /db_xref="GeneID:882927" CDS complement(2743800..2746679) /gene="gcvP2" /locus_tag="PA2445" /EC_number="1.4.4.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycine dehydrogenase" /protein_id="NP_251135.1" /db_xref="GeneID:882927" /translation="MTDNLNLGAIDLGTDDEFIARHIGPRAADTQAMLQRLGYDSLDT LIGNVIPDSIKGSSVLDLPAGMGEAEALASLKAIAARNRALRSFIGQGYYNCHTPAPI LRNLLENPAWYTAYTPYQPEISQGRLEALLNFQTLVSDLSGLPIANASMLDEATAAAE AMTFCKRLSKNRTSQAFFASRHCHPQTLDVLRTRAEPLGIEVVVGDESTIEDFSAYFG ALLQYPTCDGEIVDYRELVSRFHAVDALVAVAADLLALTLLTPPGEFGADVAIGSAQR FGVPLGFGGPHAAYFATRDAFKRDMPGRLVGVSIDRHGKPAYRLAMQTREQHIRREKA TSNICTAQVLLANIASMFAVYHGPQGLLRIARRTHRLTAILAAGLERLGVAVEQKHFF DTLSLATGARTAAIHAKARAAGINLREIDAGRLGLSLDETVRQTDVETLWGLLAEEGQ ALPDFAALAASSGDRLPVELLRQSAILSHPIFNRHHSETELMRYLRKLADKDLALDRT MIPLGSCTMKLNAASEMIPVTWAEFGNLHPFAPAEQSEGYRQLTDELEAMLCSATGYD AVSLQPNAGSQGEYAGLLAIRAYHQSRGDSQRDICLIPSSAHGTNPATASMVGMRVVV VACDARGNVDVEDLRNKASEHKERLAALMITYPSTHGVFEEAIREICAIVHDCGGQVY IDGANMNAMVGLCAPGKFGGDVSHLNLHKTFCIPHGGGGPGVGPIGVRAHLAPFLPGH ARGERKEGAVSAAPYGSASILPITWMYIRMMGGEGLKRASEMAILNANYIAHRLEEHY PVLYAGGNGLVAHECILDLRPLKDSSGISVDDVAKRLMDFGFHAPTMSFPVAGTLMIE PTESESKAELDRFCDAMIRIREEIRAVERGELDKEDNPLKNAPHTAAELLGEWNHAYS REQAAYPLASLVEAKYWPPVGRVDNVYGDRNLTCSCPPIEAYSEE" misc_feature complement(2743803..2746634) /gene="gcvP2" /locus_tag="PA2445" /note="glycine dehydrogenase (decarboxylating); Region: PLN02414" /db_xref="CDD:178035" gene complement(2746690..2747073) /gene="gcvH2" /locus_tag="PA2446" /db_xref="GeneID:882928" CDS complement(2746690..2747073) /gene="gcvH2" /locus_tag="PA2446" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycine cleavage system protein H" /protein_id="NP_251136.1" /db_xref="GeneID:882928" /translation="MSKLRFTTDHEWLRQDDDGLLTVGITAYAQDALGDVVFVQLPEL GEHAAGSEVAVLESVKAASNILMPLDGEVVAINDALPDAPELVNQDPLGEAWFFRFRP ADAGAWEKLLDQAAYDRLLNANADA" misc_feature complement(2746693..2747073) /gene="gcvH2" /locus_tag="PA2446" /note="glycine cleavage system protein H; Provisional; Region: PRK13380" /db_xref="CDD:237370" misc_feature complement(2746894..2746896) /gene="gcvH2" /locus_tag="PA2446" /note="lipoyl attachment site [posttranslational modification]; other site" /db_xref="CDD:133457" gene complement(2747332..2748255) /locus_tag="PA2447" /db_xref="GeneID:882926" CDS complement(2747332..2748255) /locus_tag="PA2447" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251137.1" /db_xref="GeneID:882926" /translation="MDKLNALAMFVATAETGSFSRGAERLGKTPSALTKAVAHLEAEL GARLFERTTRSLALTEAGQIYLEAARQSLETLRTAGQEIELLESELRGELRLAAPPSF AAAFLQQACASFLEAHPRISLRVDLDETFLDLSEGGYDLGLRDGPIDLPGLVARPLAP NQIVLCASPAYLARQPAPQGPEDFERHAWLVFQHPSLNQNFWWMERDGARQRIDQPRP RLASDNYDFLLAHLLAGLGLQFCPQWSVAPLLGEGRLVRLLGDYHFDPGPFGPSIHVL YPGHRRNTRKVRAFLEHLRASLQRQGLCHRL" misc_feature complement(2747356..2748255) /locus_tag="PA2447" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 2748378..2750120 /locus_tag="PA2448" /db_xref="GeneID:882921" CDS 2748378..2750120 /locus_tag="PA2448" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251138.1" /db_xref="GeneID:882921" /translation="MKQRIPTLLAGACLAIPLHALGAADLLVVNARIFTANPQQPFAE ALAVEDGRILAVGDEAGLRALADGDSQVVDLGGKRLMPGLIDTHSHAVFGGLELAGAD MGNEQVGLDELERRLRAWRDNGKARHGDMLNVSGMHTAYWSQVKDFRARFDHGEWADQ PLAFIGSDHHTGWANAAMLKRAGIDAARVRALPEEQRNTIGHDADATPNGFLADAGLD AVLAVLPAPSAEQMLEAGRSAVRYSNSLGLTAWMDPAANGSPGDALFSLRPDENTVGV LPVYHRLAKGGELSAHVAALLVANPRSRPTDLEVLDKVRQRFLGSPNLTLPGIKVFAD GVPEYPAQTAALLEPYRNSRKTGELLIDPAHFGELVSAADARGWLVHVHAIGDRAVRE ALNGMQQARRDRDSGIAHSITHLQLVNPKEFERFRPLGVIASMQLYWAAADETTVDLM KPYISAFAYRYQYPAHSLLSKGATIAGASDWPVSSLSPWKAIQQAVTRKGPQGVLNAG ERLDRQTMFYAYTRNAARTIGLEHRIGSLEPGKQADFIVLDRDVFEVPETQLGETKVL KTWFAGKPVYSSEG" misc_feature 2748444..2750114 /locus_tag="PA2448" /note="Predicted amidohydrolase YtcJ [General function prediction only]; Region: YtcJ; COG1574" /db_xref="CDD:441182" gene complement(2750128..2751663) /locus_tag="PA2449" /db_xref="GeneID:882923" CDS complement(2750128..2751663) /locus_tag="PA2449" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251139.1" /db_xref="GeneID:882923" /translation="MRIHVSFIDRVGITQEVLALLGGRNLNLDAVEMVPPNVYIDAPT LSPEVLEELRAALLGIRGVQAMTVVDILPGQRRRLQLDALLAAMADPVLAVDGKGLVL LANPAFSERCGRDPAGERLASLFDDETLEDALVEQGFRLPLREVTFMGQALLLDATPI TEGPGEGERHLAGGLLTLYEPNRIGERLAALHHDHAEGFEMLLGDSQPIRTLKTRAQR VAALDAPLLIHGETGTGKELVARGCHALSARHNSPFLALNCAALPENLAESELFGYAP GAFTGAQRGGKPGLLELAHQGTVFLDEIGEMSPYLQAKLLRFLSDGSFRRVGGDREVR VDVRILSATHRNLEKMVAEGSFREDLFYRLNVLSLEVPPLRERGHDILLLARHFMQQA CAQIQRPVCRLAPGTYPALLSNRWPGNVRQLQNVIFRAAAICESSLVDIGDLEIAGTA VARQNDGEVGSLEEAVEGFEKALLEKLYVSYPSTRQLAARLQTSHTAIAHRLRKYGIG PRA" misc_feature complement(2750140..2751663) /locus_tag="PA2449" /note="Transcriptional regulator TyrR of aromatic amino acids metabolism [Transcription, Amino acid transport and metabolism]; Region: TyrR; COG3283" /db_xref="CDD:442513" gene complement(2751745..2752662) /locus_tag="PA2450" /db_xref="GeneID:882924" CDS complement(2751745..2752662) /locus_tag="PA2450" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251140.1" /db_xref="GeneID:882924" /translation="MRRLLHPVFCAALFCLYPALVQAAAESEILGLFQRWQAAHGQRS GKALEGVYAPRLDYYGRAQTRERTLSAKQAFFARHPDFEQRIVAAPQIVPGDQEGRYE VRFVKQVRLDGRLRNYPGLLLAERAGPGDTWRFVGESDEITRYAVDPRYTPLARGRFA GTEADFAWVVAHAPNSAALCDEYEDCRCDLWSADARVPPKPLGSCTGAVLSVLGGLDD SGRERLQLLRTWWTSTWTKSSLLEIRDGQWVRVLPDISTTWDDAEAELVLYKADPQQP GRVLVTETVMADEGDWSHRTRSEALRPVP" gene complement(2752866..2754445) /locus_tag="PA2451" /pseudogene="unknown" /db_xref="GeneID:882922" gene 2754602..2754823 /locus_tag="PA2453" /db_xref="GeneID:882918" CDS 2754602..2754823 /locus_tag="PA2453" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251143.1" /db_xref="GeneID:882918" /translation="MTSRLLPALLLSSAFAVLAGCSTPTIVTLNDGREIQAVDTPRYD RSSGFYELEQLDGKRTRVNKDQVRSIKDM" misc_feature 2754644..2754820 /locus_tag="PA2453" /note="Bacterial protein of unknown function (DUF903); Region: DUF903; cl05512" /db_xref="CDD:471259" gene 2754877..2755728 /locus_tag="PA2454" /db_xref="GeneID:882951" CDS 2754877..2755728 /locus_tag="PA2454" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251144.1" /db_xref="GeneID:882951" /translation="MRSDLHEANRLSWNAATRAHNSHKADQAAFFRNGGSTLYPEELQ LLGHLDGLRLLHLQCNAGQDSLSLARLGARVTGVDIGDSAIDFARQLSRDSGIAADFQ RDDILRWLPVAATRGERFERVFASYGTLVWLSDLKRWADGIAQVLVPGGRFVLVEFHP FALYFDPHWQPAYDYFSREPIAESGVSDYVAESGASLAPSGYRAGVENFSNPHPSYEF QWGLADVIGALLGAGLQLERLEEYPYANGWAGFDGMRDGGGGRMLPPADRPRLPLMYG LSARKPR" misc_feature 2755021..2755341 /locus_tag="PA2454" /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase [Coenzyme transport and metabolism]; Region: UbiG; COG2227" /db_xref="CDD:441829" gene 2755725..2756252 /locus_tag="PA2455" /db_xref="GeneID:882948" CDS 2755725..2756252 /locus_tag="PA2455" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251145.1" /db_xref="GeneID:882948" /translation="MTEERLLRRDEIPLVWEIDRSEVIGHLYSVEAGQLVLRPEFYDM RGWPEGEAEHYTPILLDCFDRGGWFLGLFDQGRLIGAVVLDPRRLGPERDWLQLKFLH LSHAYRRRGLGAHLFHLAATQARHLGASALYVSATPSQNTVDFYTRLGCRLCMEPDEE LYRLEPEDVHLVFNL" misc_feature <2755944..2756249 /locus_tag="PA2455" /note="Predicted N-acetyltransferase YhbS [General function prediction only]; Region: yhbS; COG3153" /db_xref="CDD:442387" gene 2756918..2757898 /locus_tag="PA2457" /db_xref="GeneID:882963" CDS 2756918..2757898 /locus_tag="PA2457" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251147.1" /db_xref="GeneID:882963" /translation="MWTNTFQEGLKIVGENISLSLPDGRQELFRLTDGAISSDATTGT LSKDQAGWRYDYRDGTSSLFDVQGRLIQRKVRGQVITITYPNLSTTKAKDGFGNTLTV SWNATKQPYLVDYNGSLKVEYLYDGGARLVSKKTTSQGLNRTRKYLYADSGNAGLMVG IIDEQGTRYATWTYDNQGRAISSEHANGAEKVSLAYNDDGSTTVTNEYGKQATYRFQV IQGIKRIVAIEGQPSPNCPSSNSTFTYDDQGLLTSKRDNNGNLTTYQYNARGLETSRT EAAGTAQARTITTDWHPTLFLPVQVSEPGRITRYQYDAEGRKTGETVTTR" misc_feature <2756942..>2757889 /locus_tag="PA2457" /note="RHS element core protein; Region: RHS_core; NF041261" /db_xref="CDD:469161" gene 2758061..2759182 /locus_tag="PA2458" /db_xref="GeneID:882939" CDS 2758061..2759182 /locus_tag="PA2458" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251148.1" /db_xref="GeneID:882939" /translation="MQDVTLYAYDSRGNLTQVTNALGQVTRLGDYDERGKPGSITDAN GVTSSLAYTGVDGWLASVSTAGSTTRFDYDAVGQITRVTRGDGSWLSYEYDDARRLVA IGNNLGERLEYDVDTKGNRTAQRIKDASGSLVRQQQWAYDELGRLLRAVGAGGQTRSF AYDLNDNPVGETNPRQFAHSQAFDALDRLVGQSDPLGGKTRLAYDAQDNLTEVKDPRG VTTRYEYDGLGNLTRLVSPDSGTTTFEHDAAGNVIRRTDARGTVTEYRYDALNRLIER HSPSDPSLDVQYRYDLTADGNKGIGRLGSIEGARDSLVYRYDERGNLVEQVRSIRLDQ QTLLDRVTYRYDAANQLLEIGYPSGLAIREKGTDLFSLL" misc_feature <2758082..>2759050 /locus_tag="PA2458" /note="RHS element core protein; Region: RHS_core; NF041261" /db_xref="CDD:469161" gene complement(2759482..2760087) /locus_tag="PA2459" /db_xref="GeneID:882940" CDS complement(2759482..2760087) /locus_tag="PA2459" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251149.1" /db_xref="GeneID:882940" /translation="MTQWQLLADDLWGGEKNICFFVHSGACFWVVDDKFNFILDAEKD YRAYLDKGHITQEQYASACMTFRGGVLKLTAENFLKYLRAGERWVLSRQDLKDMFVCG LDMSESLHGRIEGYYLSGVELSASYFHDANTVASRLPMFYVNFDRKIYMHMDFNRAHE ELAYSDWLAKCSDFCHLVPDRERYWVLEGMDYWKYRFLQLA" gene complement(2760323..2760619) /locus_tag="PA2460" /db_xref="GeneID:882945" CDS complement(2760323..2760619) /locus_tag="PA2460" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251150.1" /db_xref="GeneID:882945" /translation="MRCLEKKGLLTMSSQLIGLLAASTQGDADAKSLQTGAWVARNAT QHNYLSHWQEEKKRQEVDGCKEKPLCKRNRSQMGNYFGPAGCQTIKGTDLFSLL" misc_feature complement(2760467..2760607) /locus_tag="PA2460" /note="Pre-toxin domain with VENN motif; Region: PT-VENN; pfam04829" /db_xref="CDD:428147" gene complement(2760872..2761351) /locus_tag="PA2461" /db_xref="GeneID:882913" CDS complement(2760872..2761351) /locus_tag="PA2461" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251151.1" /db_xref="GeneID:882913" /translation="MITIFFETGEELDLPLDNFAKSNLSGLELHRAIFDGLDLSEADF TASNLRNASFNHALLGGAVMNSAALMNASFVDAIMKGVKLVDAMAAYADFSGADLSMA SLKNADIGGSNFINSNLRDVNIDVARIDGAVFRGAIYNDRTIWPKGFIPENFGAIKG" misc_feature complement(2760938..2761300) /locus_tag="PA2461" /note="Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; Region: YjbI; COG1357" /db_xref="CDD:440968" gene complement(2761921..2778804) /locus_tag="PA2462" /db_xref="GeneID:882914" CDS complement(2761921..2778804) /locus_tag="PA2462" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251152.1" /db_xref="GeneID:882914" /translation="MDIRSPLNQCIALSLAGILFLNPIVAAAAGLALDKAAGGNTGLG QAGNGVPIVNIATPNGAGLSNNHFRDYNVGANGLILNNATGKTQGTQLGGIILGNPNL KGQAAQVILNQVTGGNRSTLAGYTEVAGQSARVIVANPHGITCQGCGFINTPRATLTT GKPIMDGQRLERFQVDGGDIVVEGAELNVGNLEQFDLITRSAKLNAKLYAKNLNIVTG RNDVQADSLQATPRAADGSEKPQLAIDSSALGGMYAGAIRLVGTEQGVGVKLAGDMAA SGGDIRIDASGKLSLAQASSQGDLKIAAQAVELNGKTYAGGSAEIRSAEELVNRQSLA ARERIALEAAHIDNAGVIEAGVEPDERRNARGDLELRSGTLRNAGSLVASRALEAKAS QALDNQGGSLKGATVRVDGGHLDNRGGKLLAEGELRVEASSLDNRQDGLLQSRDRAVV KTRGDLDNRGGQVVGLNELQVQAAALDNRSAGLLSSKGDMDIEFARLDNSAGGKLVSE RRTLLKADRLDNRSGRIVAGQDLDLSSRLIDNRAGDISSTSRVVASAREQLDNRGGKI VGDSGLDITTPRMLNQDKGVLASRDGLRLSATELFNGAGGLLSSQKGIDVSLAGAFDN QAGSLDSRGFLTVKSAWLDNQGGTLSSAGALAVTSQGALNNQGGRLASDAGLSLSSAS LDNSQAGAISGKGAVEIRTGNLNNSRKASIGSDAGLTLVAARVDNSQAGRIAAKGVID ADLQGLDQHDRGNLVSDTGITLDLNKGSLVNRAQGLIATPGTLLLRQLGVVDNSGGEI SSDRAFTLATSALNNQGGRLLSGGALTLRIAQALDNSLEGIVSGAGGLDIQAFVLDNR SGSIGSKGAIDIGVTRLENDAGTLIAERGLKLVADEANSSKGRIAANGSLHAKVGTLS QKGGELTSQDSLTLDLGILNNNAGRIAGNQGVDITARQVDNSVGEIASQGVVALNLTE QLDNRGGKIVGDSGLGITAPHVLNQDKGVLASRDGLRLSATELFNGAGGLLSSQKGID VSLAGAFDNQAGSLDSRGFLTVKSAWLDNQGGTLSSAGALAVTSQGALNNQGGRLASD AGLSLSSASLDNSQAGAISGKGAVEIRTGNLNNSRKASIGSDAGLTLVAARVDNSQAG RIAAKGAIDAALQGLDQHDRGSLVSDTGITLDLNKGSLVNRAQGLIATPGTLLLRQLG VVDNSGGEISSDRAFTLATSALNNQGGRLLSGGALTLRIAQALDNSLEGIVSGAGGLD IQAFVLDNRSGSIGSKGAIDIGVTRLENDAGTLIAERGLKLAADEANNSKGRIVAKDE LRAKLGALVQNGGELTTQGALALDADKVDNGAGRIAGNRGVVIDARQVDNRAGEIASQ GVATLNLTEQLDNRGGKVVADSGLGITAPRVLNQDKGVIASRDGLRLSGTELFNGNAG LLSSQRHIEVTLDGVLDNQGKGALLSDGTLTVSAGRIHNQDATLSSAGALRLSSQEAV DNRGGKLVTDSSLRLTSASLDNSRSGIISANAAAEIHTGVLNNSQKGNLGSNDGLGLI ATEVDNSQEGRITAKGMIDANIKGLDQQGKGRLVSNAGIILDLNEGTLANGAQGLIAT PGTLLLRQLGMVDNSGGEISSDRAFTLTTSALTNQGGRLRSGGVLTLRIAQALDNSLE GVLSGTGGLDIRALALDNRSGSIGSKGAVDIDVSRLENDDGDLLSEGRLKLTAERANS VRGRIAARGDLHASVTAFNQAGGELSSEGALMLEADSLDNRSGGLVSADGNLTVSARR IDNRAGEIASPGQVTLDVAEQLDNRGGKAIGDSGLRLAAPRVLNQDGGVLASRDGLRL NGAELFNGNGGLLSSQQSIDVILDGVLGNQAGSLSSQGRLSVKSGRLDNQGGAVSSAG TLSLSSQGALNNQGGRVVTDAGAVLRSASLDNSQGGIVSAKGAAEIRTGSLNNSQKGG IGSGAGLALVADLVDNSQNGRITAKGAIDANLKGLDQQGSGRLVSDTAIALDLRGGEL VNRAQGLIATPGALLLRQLGVVDNSGGGEISSDRSFTLAATALSNRGGRVISGDSLTL RIAQALDNSLQGVLSASGGLDVAALVFDNHSGIVASKGDTHIGVNRLENEAGRVVSEG ALDLTAKQVSSAKGRIAAKGDLQVTVGTLEQQGGELASQGTLTLDADSLDNRNGGLVS ADGGVTAEARQIDNRGGEISSVAKVALAVREQLDNRGGKVIGDSELSLTVQRLLNQAK GVLASRDGLHLDGAELLNGDGGLLSSQRLVDVTLSGALDNQGSGALVSEESLTVKADQ VNNQAGTFSSAGSLLVTSRGELNNQGGRLVTDAGATLNSTGFDNSRAGLVSAKGAVAI RTGALNNSQKGSIGGNTGVTLVAGLVDNGREGRISTKGTLDANLKGLLQQGGGSLVGE RGVTLDLNGGTLDNHDLGLVSTPGALLLRQLGMVDNSVGGEISSDRAFTLAANTLNNQ GGRLISSEALTLRIAKTLDNSLKGQVLATDGLAIESQVLDNRAGTIGSKGDARISVTS LDNAEQGSLVSEGRLELVADQVSNGNQGRIAARGVLEAAVGTLLQQGGELVSQGSLDL RADTLDNSQSGLIAANGGIAIEARQVDNRAGEISSTSKVAVNAREQLDNRGGKVIGDS GLRLTVQRLLNQAKGVLAGRDGLSLDGGELFNGDGGRLDSQNSLSVSLGGVLDNQGGA LVSEGSLTARAARLDNRGGTFSSAGALALTSQAVLDNQGGRLLSDAGVTLKGASLDNS RSGVISAKGAVDIRTGVLDNSRNGGIGSNAGITLVAARLDNGQQGRVSAKGLLDANLK GLDQRGGGVLVSETGVTLDLNGGTLVNRDGGLIATPGALLLRQLGAVDNGAGGEISSD RAFTLAAASLDNRGGRLIGADSLTLRIAQALDNSLAGVISGAAGLDIAAARLDNSAKG TLASRAGIDLRVDGALDNHAEGTVSGARLTLASASLDNSGKGLLSGNAGLSVATGALD NAEGGQLISQGVLDVSSADLDNRGGALSGKQSLRLSAANLDNRGGLLTSDGELELTAG RVDSADGGEISARGDLRLTVERLVQRQGRLIGERGVSLDLRGGDLDNQGGLISARGPL SIERLNVLDNRQGGEIYSQQGFELLARRIDNGQQGRIISAGKLRLDADALGNAGAGLL SGWQGLTVTGGSLDNSAGGTLSSKDGELAISLGGALDNHGQGALVSKGAQRIDAASLD NAQGIVSGESDVTLSIAGKLDNGQGGLVSAQRALSFERDDTLLNNAGGRINGGSLLLK GASLDNSDGQLISQGRLDAILGGALVNAGAARLASGGDLLLRSASVDNRGGKLVSQGL LEISAGSLDNSASGTLASQADMSLRLGGGALRNQQDGLIFSQAGALEVQAGSLDNRQG TLQAQGDNRLRIGGALDNQAGRLDSRAGNLDLQSGSLDNGAGGVLNSAKGWLKLVTGL FDNSAGVTQAQSLEIRAGQGVRNQQGHLSALGGDNRIVTADFDNQGGGLYASGLLSLD GQRFLNQGAAAGQGGKVGAGRIDFSLAGALANRFGQLESESELHLRAAAIDNSGGSLR ALGRSGSTRLVAGDLNNAYGVLESANQDLDLQLGSLANAGGRILHTGNGTFGLDSGQV IRAGGELTTNGLLDIRASEWTNSSVLQAGRLNLDIGTFRQTAEGKLLAVQSFTGRGGD WSNDGLLASNGSLRLELSGGYRGNGRATSLGDFALNAASLDLGNAASLAGGANVTLGA GNLLVNRGRITAAGDLVASAASLNNYGTLGGGGNLRLNAPALLNERGLLFSGADMTLR AGDITNLYGDVYSLGRLDIARDDAGGWANRLENISGNLESTGDMRFSVSSLLNRRETL EIEGDLQNSAIGVRCTGCQLSERWGKTRSSSELVWIREYKSTLGDSSAAASITAGRDL LVVGASLQNIASNISAVRDATLSLSNFENKGYALGEYAVRGVYSPPSKFGEELLMRIL AYNAVNDPSYGEGYASTGGRLPNIHYFDKNFNEKVSPLEVIHGNGKNGGPGWHLYFGT LDVEYPDTDRWNKAIGRIPAPNYSSKKTDAIPDLLKGLAPLDELTINKGANSTVGAVV QAGGRVTVNAAESFNNSVLQGFQAVQETQLPHQDIAVSSTTSAVVTLKSQLPADLARQ QINPLTLPGFSLPQGQNGLFRLASQGAQVNQASGALKSASDLTQSGHGVSVSAQTGSG ASGWSTQARRVGDDRVTSLAGSAYQGRVAEAIDALRASAPISGDGGNTGRFQAGEHQA TTGLGGLVEGNASGHSGNGVILADLRGGLPSFSSLPASDHVQGTVPGHDGNGTILANW QGAQATVQASPSTVRVEGVVSSPGGNGSILADLPAEQSSVQALPSAVRAQGSLPRLEE RSALLAEPPVGQPALQTLPSVARVEGVPSNATPSNSHKYLIETNPALTELKQFLNSDY LLGGLGINPDDSKKRLGDGLYEQRLVREAIVQRTGQRFIAGLNSDEAMFRYLMDNAIA SKDVLGLTPGVTLSAAQVAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLGPNGAL IQGRDVNLITGGDLRNAGTLRAQNDLSATAGNIDNSGLIEAGNRLDLLASGSIRNDQG GIIAGREVSLSALTGDVINERTVTQHQSSYRGTGTTEAFADSAARIEAAQKLTVSAGR DVANIGGVIDSKGDLALQGGRDVLVSAAVAERGWTAGSQAYQTQTTQMGAEVVAGRDI SVSAGRDISVVGSRIDARRDVTFEAGRDVGLVAAANEEHAYGKTKKVTFQDDKITQQA TRVDAGGDLAINAGQDLRLVASQASAGDEAYLVAGDKLELLAANDSSYYLYDKKSKGS FGSKKTRRDEITDVTAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGGAVTF EAVKDLHQESHEKSKGDLAWQSSKGKGQTDETVRQSQIVAQGNLAIKAVEGLKIDLKH IDQKTVSQTIDAMVQADPQLAWLKQMEQRGDVDWRRVQELHDSWKYSNSGLGVGAQLA IAIVVAYFTAGAASAALGSMAGVGAGSGSMMAAAGSTAMVQAGTAVGTAAAGWANAAG TAVAMGMASNGAISTINNRGNLGDVVKDVTSSDALRGYVVAGTTAGLTAGVYDKWTST QTGTSTALPNTGAVAPAAGLGTWQGVGQFTSNQLLQNGTSVLLDRALGGKGSLGDALQ NSLANAFAAYGFKLIGDTTHGVLDDGSLGKIGLHALMGGLAAEAVGGDFRTGALAAGV NEALVDSLAKQYASLPIDDKKGLLIMSSQLIGVLAASTQGDADAKSLQTGAWVAGNAT QHNYLSHWQEEKKRQEVDGCKDKQLCKTGIEAKWAIISAQQDVGIVVGVGGGIGLSTA ETAVGVYELVKNWRETYAALEQLATSPEFRQQFGDNYLKGLEERAAFLTQAYEDAGWQ GSVTAGVEGGRFAAELVGVLTAVKGGAQITAKLPTAAKNLVNAIAESPVSGSMSSQLG AVGDLGRLGGGGKGYVDILSHEAKQHILYGDKPGSGGHLWPGQAGKTVFPQNWSADKI VHEVGDIATSPSTKWYAQTGTGGVYTSKGDPAKWVAYEVRDGVRMRVVYQPATGKVIT AFPDNAPIPPYKPIK" misc_feature complement(2777932..2778720) /locus_tag="PA2462" /note="TPS secretion domain; Region: TPS; pfam05860" /db_xref="CDD:461762" misc_feature complement(2777671..2777718) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2777611..2777670) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2777554..2777607) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2777491..2777550) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2777428..2777487) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772925..2777463) /locus_tag="PA2462" /note="Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport]; Region: FhaB; COG3210" /db_xref="CDD:442443" misc_feature complement(2777371..2777424) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2777305..2777361) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2777242..2777301) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2777182..2777238) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2777119..2777178) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776993..2777052) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776930..2776989) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776870..2776926) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776807..2776866) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776744..2776794) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776681..2776740) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776618..2776677) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776558..2776605) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776489..2776551) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776423..2776482) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776363..2776419) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776300..2776359) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776237..2776293) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776177..2776233) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776117..2776173) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2776057..2776113) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775997..2776053) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775937..2775993) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775874..2775933) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775811..2775870) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775748..2775807) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775685..2775744) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775628..2775681) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775562..2775621) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775499..2775558) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775436..2775495) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775373..2775432) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775313..2775360) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775244..2775306) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775178..2775237) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775118..2775174) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2775055..2775114) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2774992..2775048) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2774932..2774988) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2774812..2774928) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2774755..2774808) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2774692..2774748) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2774629..2774688) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2774569..2774625) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2774503..2774562) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2774443..2774490) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2774377..2774433) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2774314..2774373) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2774254..2774310) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769178..2774271) /locus_tag="PA2462" /note="Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport]; Region: FhaB; COG3210" /db_xref="CDD:442443" misc_feature complement(2774191..2774250) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2774125..2774184) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2774065..2774121) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773930..2773989) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773870..2773926) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773807..2773866) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773744..2773800) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773684..2773740) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773624..2773680) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773564..2773620) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773504..2773560) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773441..2773500) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773378..2773437) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773318..2773374) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773252..2773311) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773189..2773248) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773129..2773185) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2773066..2773125) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772943..2772999) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772877..2772939) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772682..2772741) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772619..2772678) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772556..2772615) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772493..2772549) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772436..2772489) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772373..2772429) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772313..2772369) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772253..2772309) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772190..2772246) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772127..2772186) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772067..2772123) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2772004..2772060) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771938..2772000) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771875..2771931) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771812..2771871) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771749..2771793) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771689..2771745) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771623..2771685) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771563..2771619) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771494..2771556) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771428..2771487) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771365..2771421) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771302..2771361) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771239..2771298) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771179..2771235) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771116..2771172) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2771053..2771109) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2770990..2771049) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2770930..2770986) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2770867..2770926) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2770807..2770863) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2770741..2770800) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2770678..2770737) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2770618..2770674) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2770555..2770614) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2770369..2770425) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2770306..2770365) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2770237..2770290) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2770174..2770224) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2770108..2770164) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2770045..2770104) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769979..2770038) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769916..2769975) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769856..2769912) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769790..2769852) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769733..2769786) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769670..2769726) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769607..2769666) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769547..2769603) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769481..2769543) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769418..2769462) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769352..2769411) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769289..2769348) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(<2768221..2769321) /locus_tag="PA2462" /note="Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport]; Region: TamB; COG2911" /db_xref="CDD:442155" misc_feature complement(2769232..2769285) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769097..2769153) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2769031..2769093) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2768968..2769027) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2768908..2768964) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2768845..2768904) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2768785..2768838) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2768722..2768778) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2768653..2768715) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2768587..2768646) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2768524..2768583) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2768395..2768457) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2768335..2768391) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(<2767102..>2768388) /locus_tag="PA2462" /note="fibronectin-binding autotransporter adhesin ShdA; Region: PRK15319" /db_xref="CDD:185219" misc_feature complement(2768272..2768331) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2768212..2768268) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2768134..2768208) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2768077..2768130) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2768005..2768070) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2767942..2768001) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2767876..2767938) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2767762..2767812) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2767642..2767698) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2767582..2767638) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2767519..2767578) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2767405..2767458) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2767342..2767398) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2767261..2767338) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2767201..2767257) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2767045..2767116) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2766985..2767041) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2765053..2765109) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2764996..2765049) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2764933..2764992) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2764867..2764929) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2764801..2764863) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2764738..2764797) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2764690..2764734) /locus_tag="PA2462" /note="FHA beta-helical repeat [structural motif]; Region: FHA beta-helical repeat" /db_xref="CDD:293785" misc_feature complement(2764009..2764416) /locus_tag="PA2462" /note="Hemagglutinin repeat; Region: Fil_haemagg_2; pfam13332" /db_xref="CDD:433123" misc_feature complement(2763019..2763522) /locus_tag="PA2462" /note="Possible hemagglutinin (DUF637); Region: DUF637; pfam04830" /db_xref="CDD:428148" misc_feature complement(2761954..2762259) /locus_tag="PA2462" /note="Bacterial EndoU nuclease; Region: EndoU_bacteria; pfam14436" /db_xref="CDD:433952" protein_bind 2762565..2762577 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2461" /bound_moiety="AmrZ" protein_bind 2773471..2773483 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2462" /bound_moiety="AmrZ" protein_bind 2776165..2776177 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2462" /bound_moiety="AmrZ" gene complement(2778917..2780614) /locus_tag="PA2463" /db_xref="GeneID:882955" CDS complement(2778917..2780614) /locus_tag="PA2463" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251153.1" /db_xref="GeneID:882955" /translation="MLRSSYRAVVAGLVLLPLLASAAPFTSPGDRDLIRDRQQRLLDE QRKRLEELQQLPGKGAPAAADASGDDERCFEIRRIELEGAGHLGESARRQLLAPYQGR CLGVGQLNALLKAVTDHYLDRGYVTTRAYLPQQDLASGTLRIIVVEGRLEGLDSSALA SPRELAMSFPGRTGELLDLRELEQLVDQLSRLPSRQAQLELVPGSEVGGSRVRLKGER DKPWRVSATRNNDGDVSTGEQQMGLGLDWDSPLGLADQLNLRANRDAVTDRWRHSDSQ SLFYSLPWGWWTFTYGYSQSDYRTRNEASGFPFKLDGDSRSHQFRAERVLHRDGVSKT AMSLGLSHQRTNNYLEDTRLEDQSTRITETQLGFNHGRRIGSGFVNLDFGWQQGIGAL GAQGRGHPHAGDPNARYDKYSLTLSYLQPFQLWGERFSFDSLATGQRSEDVLFSPQRI SLGGNSSVRGFKDQTLTGDSGGYWRNQLRWRRAVEWAPLRPWLQEYGVAFAYDVGVIR HDRYNDGASGRMSGNAIELDARGRYFAASVGFARSLERPSAIERREHPIYFRVDAFF" misc_feature complement(2778920..2780593) /locus_tag="PA2463" /note="Hemolysin activation/secretion protein [Intracellular trafficking, secretion, and vesicular transport]; Region: FhaC; COG2831" /db_xref="CDD:442079" gene complement(2780927..2781451) /locus_tag="PA2464" /db_xref="GeneID:882957" CDS complement(2780927..2781451) /locus_tag="PA2464" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251154.1" /db_xref="GeneID:882957" /translation="MNARIAALGLLLPLAAGSAVAAEEGSSVKDAAKAAVSSAIETGK NLLGGVSEGITSGRQSAQGADGAKVVSDNAGFAEIGQVEVLKTEPRDQQLAVTLGFKN DGDATVRLINLTQTGALLVIDNDGYSNALVALANPDDVTVPAKAGIRQTFVFEGGAEG IKAVRLWGKDLPVK" gene complement(2781498..2782646) /locus_tag="PA2465" /db_xref="GeneID:882958" CDS complement(2781498..2782646) /locus_tag="PA2465" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251155.1" /db_xref="GeneID:882958" /translation="MRPVLVLLHRYVGLATALFLFLAGLTGSLLAFHHEIDEWLNPGF YAVGEGGERLSPGSLVQRVESRYPRQLVWYMEYPEAGGHPALLATVPREAGAKVEHDV FYLDPVSGEEVGKRLWAACCFQPANLVPWVLEFHHNLTLPGNWGLYLMGGVAMFWFLD CFVGAWLTLPRGRPFWSKWTTAWKIKRGNAYRFNFDLHRAGGLWLWLLLAPVALSSVA LNLPSQVFKPLVSLFSPIEPSVYEARGRLPREQLGETRLDYDRTFQLASVEAARLGIA EPIGELYYSFEYNFFGAGFGDHDDPMGKSWLFFHGSDGRLLGQEVAGQGSWGERFYRL QYPIHGGRIAGLPGRIAIAALGLAIAGLSLTGVYIWWRKRRARHWNGR" misc_feature complement(2781513..2782646) /locus_tag="PA2465" /note="PepSY-associated TM region [Function unknown]; Region: PiuB; COG3182" /db_xref="CDD:442415" gene complement(2782764..2785226) /gene="foxA" /locus_tag="PA2466" /db_xref="GeneID:882859" CDS complement(2782764..2785226) /gene="foxA" /locus_tag="PA2466" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="ferrioxamine receptor FoxA" /protein_id="NP_251156.1" /db_xref="GeneID:882859" /translation="MTATAVVLRNAPSSLDFPRASRLSRSVRAALLSLAMAAGAAPLC ASAAEAAAEQARPYAIPAGQLGDVLNRFAREAGITLSATPAQTGGYSSQGLRGSFTVQ QGLARLLADTPLEAEDQGDGSFVLREAPAKDGDVLNMQAVEVFALGNNLGSTDGYLAT HSQIATKTSKPLLETSQTVSVITREQIDDTASKTVQQAMRYTPGIFTGQVGASNRYDY VVMRGFADNSVDNIYLDGLKAMGDSGTFSSMQVDPYFLERIDVLKGPSSVLYGRSLPG GLVALTSKKPLYEDYRQITGSIGNMGQKEMGFDFSGPLDEEKRIAYRLIGLGKGSDTQ FDHVKEERYAIAPTLAIDFSDDTTLTLQGYLQHDPNGGYHGGVPADGTLSHHNGRHIS REFFDGEPSKDDFDRTQRMFGYQLEHRIDDVWSARQNFRYLDSDVDLSQVYAYGWSAS EPNKLNRYFSGAREHLQAYIVDNMLQAEFATGAARHTLLTGLDYQRRRTVVDWRSGSA SALDAFNPVYGDDAISYFPDDNHTRRLEQTGVYLQDLIDIDQWRFSLGLRQDWVSVTD KNRSTGSKADDDWEKFTGRIGALYLFDNGLAPYVSYSESFNPNAYSDASGTPLAPTEG KQWELGLKFQAPGSNSFYTASLFHITQENVASKEPQDNFYTSVGEVRSQGLELEAHTQ LSDNLKLLGSYTYTDITYTKSLDGNQGHTPNQAPKHMASLWADYAFDAGPLSGLSIGG GARYVGETWADKENTLRVPDYTLVDARIGYDLGKLGLKGLDVSLNANNLLDKDYVASC YSLDFCYFGEKRNVTATVNYQF" misc_feature complement(2784840..2784995) /gene="foxA" /locus_tag="PA2466" /note="Secretin and TonB N terminus short domain; Region: STN; smart00965" /db_xref="CDD:198033" misc_feature complement(2782767..2784914) /gene="foxA" /locus_tag="PA2466" /note="Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]; Region: FhuE; COG4773" /db_xref="CDD:443805" protein_bind complement(2784728..2784740) /gene="foxA" /locus_tag="PA2466" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2466" /bound_moiety="AmrZ" protein_bind 2784753..2784765 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2466" /bound_moiety="AmrZ" gene complement(2785370..2786356) /gene="foxR" /locus_tag="PA2467" /db_xref="GeneID:882971" CDS complement(2785370..2786356) /gene="foxR" /locus_tag="PA2467" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="anti-sigma factor FoxR" /protein_id="NP_251157.1" /db_xref="GeneID:882971" /translation="MDGTRGRVDEAVVRQAIHWLVRLRSQPADDRLQRACAAWRAEHG EHERAWQQVSALNEELQGRFKALPGGVAYGTLDSSAQRLQRRQALKLLSLLVAGGAVA WVGRDSLPWQRLSADYSTATGERRSIELVDGTRLQLNTDSAVDVRYDAGQRLILLARG EIFLASGADTQSPTHRPLRVRTAQGLFEALGTRFNVRLQDAATCLSVSEGSVRIDAFG ARPLQAPVAEAGQSYRIAADGVRRLERPQMDAVAWADGLIVTRDMRLADFLAEVARYR NGYLGCAAEVADLRLSGVYRLDDTDKLLQVLARTLPVRLQRHTRWWVRVVAA" misc_feature complement(2785373..2786317) /gene="foxR" /locus_tag="PA2467" /note="fec operon regulator FecR; Reviewed; Region: PRK09774" /db_xref="CDD:236622" gene complement(2786365..2786883) /gene="foxI" /locus_tag="PA2468" /db_xref="GeneID:882912" CDS complement(2786365..2786883) /gene="foxI" /locus_tag="PA2468" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="ECF sigma factor FoxI" /protein_id="NP_251158.1" /db_xref="GeneID:882912" /translation="MSAPILLSAHHRAMHALYSEHHGWLQNWLRGKLGCAADAADLAQ DTFLRILLKRELREIGMPRAFLRTIARGLVIDHWRREELQRAYLESIAHLPEAQAPSP EARELVLELLEEISRMLDGLKPKVRTAFLLAQCEDLSHRQIAERMGVSQRSVERYVAE ALYHCYLLRYGE" misc_feature complement(2786377..2786838) /gene="foxI" /locus_tag="PA2468" /note="RNA polymerase sigma factor FecI; Provisional; Region: PRK09651" /db_xref="CDD:182018" gene complement(2786972..2787886) /locus_tag="PA2469" /db_xref="GeneID:882858" CDS complement(2786972..2787886) /locus_tag="PA2469" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251159.1" /db_xref="GeneID:882858" /translation="MDWTRRLRLQHLQLLVSLMETGNLSGTARAAHTTQPGLSKWLKE LEEDVGAPLFERHARGLRPTPYGMTLFNHAQRVLTEMERARQNLEAMRSGSGSRVLLG TSPASAPSLVPRALRAFLGRYPGAQVELLEGTMNGLLERLEKRQLDVVVGRLDNYAPR ASLRCEVLYSEAIVVMARPGHPLAQAAALDWEDVRRYDWIVWPPGSPIRSKLDMALTQ GGRQPPAYRLESSSMLANIELLRGSDMLSIGSARVVEHLAGLGLVARLALEIPGEGAV GMCWRDEPHRDRASEDLLACLREGAAAE" misc_feature complement(2786978..2787841) /locus_tag="PA2469" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 2788011..2789072 /gene="gtdA" /locus_tag="PA2470" /db_xref="GeneID:882920" CDS 2788011..2789072 /gene="gtdA" /locus_tag="PA2470" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="gentisate 1,2-dioxygenase" /protein_id="NP_251160.1" /db_xref="GeneID:882920" /translation="MHNDNSTEKRADFYRRIRQQHLTPLWEALHSLVPAQPAGGCQAA LWRYRELRPFLLEAGDLISAEEAVRRVLVLENPDLPGQSSITPSLYAGLQLILPGEIA PSHRHTQSALRFVVEGYGAYTSVDGERTRMEPGDFIITPSWTWHDHGNRAAAEGGEPV VWLDGLDIPMLRFFGATFAENHDEPVQPLRRGEGDSLARYGSNMLPLRHQPTTPTSPL FSYPYARSREALERLARLERPDPWEGHKLRYVNPATGGWAMPTIATCLQLLPAGFLGQ PARSTDASVYSVVEGSGVAQIGGRRFAFEAKDLFVVPSWAELRLEAGATDCVLFSFSD RPVQQALGILRESRETLAH" misc_feature 2788038..2789054 /gene="gtdA" /locus_tag="PA2470" /note="gentisate 1,2-dioxygenase; Region: gentisate_1_2; TIGR02272" /db_xref="CDD:131325" protein_bind 2788627..2788639 /gene="gtdA" /locus_tag="PA2470" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 2789085..2789783 /locus_tag="PA2471" /db_xref="GeneID:882915" CDS 2789085..2789783 /locus_tag="PA2471" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251161.1" /db_xref="GeneID:882915" /translation="MNHLFAPEAPVSLTIHGSDQTFPVRRVYCVGRNYAAHAREMGFD PEREPPFFFCKPADAVVPVAAGSTLELAYPSQTGNYHYEIELVAAIGKGGCDIPLEQA EEHVWGYAVGLDMTRRDLQMRMREMGRPWEIGKAFDRSAPIGPLYPASQVGHPRHAAI SLQVDGEDRQRSDIDQLIWSVAETVSYLSRFFELRPGDLVFTGTPEGVGAVERGERML GAIDGLGELSVRVV" misc_feature 2789148..2789780 /locus_tag="PA2471" /note="2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport and catabolism]; Region: YcgM; COG0179" /db_xref="CDD:439949" gene 2789861..2791207 /locus_tag="PA2472" /db_xref="GeneID:882916" CDS 2789861..2791207 /locus_tag="PA2472" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_251162.1" /db_xref="GeneID:882916" /translation="MPTPDKNNKIDVQAFIDAQAVSAFQLRVLSLCFLIVAMDGFDTA AIGFIAPALAHDWQLSPAQLSPILGAALAGLALGAFAAGPLADRFGRKSVLLLSVLFF GGWSLASAYAGSVETLALLRFFTGLGLGGAMPNAITLTSEYCPRRHRALMVTAMFCGF TLGSALGGLLAARMVPALGWESVLLLGGGLPLASLPLLWACLPESVRFLARRAPDAAR LRRILERLGRLPDGWAGRLELPADESDGTSPLRQILGAELRGGTLLLWATFFMGLLII YLLTNWLPTLIGGTGFSLGEAATISAMFQLGGTLGALLLGSAMDRFDAHRVLSLAYVG GALFILGIASLYHSFALLALCVAGVGFCISGSQVGANALAADFYPTRSRATGVSWALG LGRIGSIVGSLSGGALLGLGLGFSGILALLVIPALLAAVAVHRLGRRRARPSPTTL" misc_feature 2789945..2791180 /locus_tag="PA2472" /note="4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; Region: MFS_PcaK_like; cd17365" /db_xref="CDD:340923" misc_feature order(2789975..2789980,2789987..2789992,2789999..2790001, 2790095..2790097,2790245..2790250,2790254..2790262, 2790269..2790271,2790329..2790331,2790338..2790343, 2790350..2790352,2790665..2790667,2790674..2790679, 2790686..2790694,2790701..2790703,2790782..2790784, 2790794..2790796,2790944..2790949,2790959..2790961, 2790971..2790973,2791019..2791021,2791028..2791033, 2791040..2791045,2791052..2791054) /locus_tag="PA2472" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340923" gene 2791220..2791864 /locus_tag="PA2473" /db_xref="GeneID:882919" CDS 2791220..2791864 /locus_tag="PA2473" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutathione S-transferase" /protein_id="NP_251163.1" /db_xref="GeneID:882919" /translation="MQLYSFFNSSTSYRVRIALALKGLDYQVVPVNLRQGEQLRPADR QRNPMGALPTLVDADGRRFSQSLAIIDYLDAVQPEPRLIPLDPLHRAQALELALLVAC DIHPLNNVRVLKYLTQVLGIDAEDRQRWYAHWVAEGLAAAETLLNRHRRGAFFAGAAA GIVECCLVPQLANARRMGCDLAPYPALLELEGRCLALEAFQRASPERQPDYLPD" misc_feature 2791223..2791852 /locus_tag="PA2473" /note="maleylacetoacetate isomerase; Region: maiA; TIGR01262" /db_xref="CDD:273527" gene 2791906..2792817 /locus_tag="PA2474" /db_xref="GeneID:882856" CDS 2791906..2792817 /locus_tag="PA2474" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251164.1" /db_xref="GeneID:882856" /translation="MTTRIRASLLALPLLLPSFQAIAALPGMNLGQTSFLDGKALPGT LFQQFVNIYEADDFMDANGHRRPLDNRLRTLLATSHFAHISQHQLFGAYYGAEILVPV LLADPDFEPHAGSANGLGNLIVSPFILQWPQTELFGRPYWQRLNLAFQLPTGRYDRHR AINPGSNHWSFNPHYALTWEFAEGWEASARLQYLLPGKNRDPAPPLADDYLQPGQAFH ANYSVSLALDAHWRLGLSGYSLRQITDERVDGHDRPDSRERVDAIGPALMFGWGKSRL FLNAYHEYGARNRSEGSRLILRYSQVF" misc_feature 2791972..2792814 /locus_tag="PA2474" /note="Sphingosine uptake channel SphA-related outer membrane channel [Cell wall/membrane/envelope biogenesis]; Region: SphA; COG4313" /db_xref="CDD:443454" gene complement(2792799..2794133) /locus_tag="PA2475" /db_xref="GeneID:879833" CDS complement(2792799..2794133) /locus_tag="PA2475" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cytochrome P450" /protein_id="NP_251165.1" /db_xref="GeneID:879833" /translation="MDDAFSEEGSAQPRHDAQRPALAPRSDGFDIHTYHPDFVADPYP LLRLIRSRAPVCRDQASIWWISRYADVSACLRDRRFSADPARLGAAGVRQGGASWFGH QQLQPLARFYDNFMLFNDAPRHTRLRRLFAPAFGPDAVRRWEARIEVLVEELLDSLLE RREPDLLRDFAEPLTIRVAAELFGFPREDTGQLLPWGRDLAAGLDLAASHGDAGQINR SAVAFSDYLQRQARGWSDGSSRPPSGAAPSILDGAAMLEAGLGLEDLVAAYAMVFMAA FETTISMVGNATLALLTHPDQLDLLRRCPELAANAVEELLRFDGAVRGGVRCTLEEVE IGGQRIPPGEKVWLSFLAANRDPEMFAAPDRLQLQRANAKQHVAFAHGPHYCLGAYLA RLELQCALRGLVRRRFALASEPTDLRWRRSSVFRTLERLPIVPEGDAQKTCE" misc_feature complement(2792835..2793977) /locus_tag="PA2475" /note="cytochrome P450 family 164 and similar cytochrome P450s; Region: CYP164-like; cd20625" /db_xref="CDD:410718" misc_feature complement(order(2792859..2792861,2793093..2793095, 2793099..2793101,2793156..2793164,2793168..2793170, 2793297..2793302,2793309..2793314,2793321..2793323, 2793522..2793524,2793531..2793536,2793789..2793794, 2793852..2793854,2793858..2793860,2793882..2793887)) /locus_tag="PA2475" /note="chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:410718" misc_feature complement(order(2792958..2792960,2792970..2792978, 2792982..2792987,2792994..2793002,2793153..2793155, 2793159..2793161,2793168..2793173,2793186..2793188, 2793294..2793299,2793306..2793311,2793318..2793323, 2793729..2793731,2793750..2793752,2793762..2793764, 2793783..2793788)) /locus_tag="PA2475" /note="heme binding site [chemical binding]; other site" /db_xref="CDD:410718" gene complement(2794206..2794976) /gene="dsbG" /locus_tag="PA2476" /db_xref="GeneID:882549" CDS complement(2794206..2794976) /gene="dsbG" /locus_tag="PA2476" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="thiol:disulfide interchange protein DsbG" /protein_id="NP_251166.1" /db_xref="GeneID:882549" /translation="MRLPRNLITLGLGLTLLNAGLATAAEELPAPIRMVQEKGARILG SFDAPDGLRGYAAEYQNQGMALYLTPDGKHVLTGHLFDAQGKDLSREPLERLVYAPLA KEMWQKMEQSAWIADGRADAPRVVYLFSDPNCPYCTMFWEQARPWVDAGKVQLRHIMV GIIREDSEAKSAALLASKDPQKALHDHEQAGKASTLKPLAKIPAAVRKQLAGNMELME SMGAAATPAIFYLNAEGRMQQQQGAPQPDQLAEILGPR" misc_feature complement(2794209..2794913) /gene="dsbG" /locus_tag="PA2476" /note="disulfide isomerase/thiol-disulfide oxidase; Provisional; Region: dsbG; PRK11657" /db_xref="CDD:183262" gene complement(2794973..2795809) /locus_tag="PA2477" /db_xref="GeneID:882174" CDS complement(2794973..2795809) /locus_tag="PA2477" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="thiol:disulfide interchange protein" /protein_id="NP_251167.1" /db_xref="GeneID:882174" /translation="MLSFSLGPLVVSLQHLLLFLALGAALLGGWLAARGGGRNAEPVL FNLLLLGLLVARLAFVVRYWPQYRGDFAQMLDIRDGGFLAWPGLLAAVLGALFWAWRR PALRRSLGVGASLGLAFWLLGSLGLGIYERGTRLPELSLRNAAGESVQLADFRGRPLV INLWASWCPPCRREMPVLQQAQAENPDVVFLFANQGESAETVRHFLQGENLRLDNLLF DNGGQLGQQVGSVALPTTVFYTAEGRLLGSHLGELSRGSLARYLEAFEPAAAAPATRS SE" misc_feature complement(2795024..2795413) /locus_tag="PA2477" /note="Thiol-disulfide isomerase or thioredoxin [Posttranslational modification, protein turnover, chaperones]; Region: TrxA; COG0526" /db_xref="CDD:440292" gene complement(2795809..2797572) /locus_tag="PA2478" /db_xref="GeneID:882175" CDS complement(2795809..2797572) /locus_tag="PA2478" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="thiol:disulfide interchange protein DsbD" /protein_id="NP_251168.1" /db_xref="GeneID:882175" /translation="MRVLILLLMLLLPGLSQAQPGDDLFAPRGATQTDFLPVEKAFRF TWERLDDGQVQLRWQIAPGYYLYQKRLRFDGLDPALQPQLPPGESHSDEFFGESQVYR QSLELTLPAAAAGQLRLGWQGCADAGLCYPPQSQALDLGGTGPAAAGTSGEVAEDQGL AGSLQAGNLAWSLLLFFGLGLLLAFAPCSLPMLPILAGLVVGSGAGPRRGLLLAGSYV LSMALVYAGLGVVAALLGGNLQAWLQQPWLLGSFAALFVFLALPMFGFFELQLPAALR DRLDGLSRGRKGGSLAGAAALGALSGLLVGPCMTAPLAGALLYIAQTGNALHGGLVLF SLGLGIGMPLLLLVTVGSRFLPKPGPWMNLVKGVFGFLFLGTAWILLRPLLGEALWIG LGGALLLVLAYAALHTARGLARHAVLFGAAGCIFGLWGAAMLLGAAAGADDPWRPLQV YAAANRGATPTASAHEAFLTVSQPAELDRQLAAAKAEGQWVLLDYYADWCVSCRIMEK QVFAKPDVLAALQGVRLLRLDVTADNAASRELLHRYQVPGPPSLIWIGPEGEERRARR LTGEVDAGGFLAHWQATRERG" misc_feature complement(2795836..2797521) /locus_tag="PA2478" /note="thiol:disulfide interchange protein precursor; Provisional; Region: dipZ; PRK00293" /db_xref="CDD:234717" gene 2797735..2798415 /locus_tag="PA2479" /db_xref="GeneID:882194" CDS 2797735..2798415 /locus_tag="PA2479" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_251169.1" /db_xref="GeneID:882194" /translation="MHVLLTEDDDLIASGIVAGLNAQGLTVDRVASAADTQALLQVAR FDVLVLDLGLPDEDGLRLLQRLRQQGVDLPVLVLTARDAVTDRVAGLQAGADDYLLKP FDLRELGARLHTLQRRSAGRCVNVIEHGRLSYDPSTRETWLDGRPVELSRREQALLQA LLNNRGRILSGEQLKDSVYGFGDEVESNALNVHIHHLRRKLGNAIVQTVRGLGYRLGP ARGDGDDA" misc_feature 2797735..2798382 /locus_tag="PA2479" /note="two-component system response regulator PmrA; Region: PRK10643" /db_xref="CDD:182612" gene 2798412..2799734 /locus_tag="PA2480" /db_xref="GeneID:882195" CDS 2798412..2799734 /locus_tag="PA2480" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_251170.1" /db_xref="GeneID:882195" /translation="MSLRLRLTLILGSAFILLWSLAAAWMLCDLRGQMMRSFDQRLAA SARMVAGLLQQLPQPQPADGQTTRLSAEQLGIPNGMACQVSSLRGEVLAQSHATPERA LDSTASGFRDQEINGVLWRSFTVQAGDLRVSTADRLEERDVLQRSVVVAAAVPVTVAL LGSLALLWLGAGQGLAPLKRIRDALTRRGADSLEPLELAALPSELKPLVETQNQLFQR IAQAIERERRLTGDAAHELRSPLTAIKTHLQVARMTEGAAAEQALAHAEEGADRLHRT LDQLLLLARVEGSLSFDDGVQCSAEDAARVAMHDAGHGDVRMFELKLADGLSEAPLEV PSVLAIAALRNLLDNALRHTAAGTRVELAVETAQGCARFHVRDHGPGIAETDLPHLTR RFWRHGKSGGSGLGLAIVQAIVQRCQCRLDFDSRADGLRVTLEMPLRE" misc_feature 2798457..2798849 /locus_tag="PA2480" /note="Two-component sensor kinase N-terminal; Region: 2CSK_N; pfam08521" /db_xref="CDD:430051" misc_feature <2798925..2799698 /locus_tag="PA2480" /note="sensor protein QseC; Provisional; Region: PRK10337" /db_xref="CDD:182388" gene complement(2799910..2800785) /locus_tag="PA2481" /db_xref="GeneID:879888" CDS complement(2799910..2800785) /locus_tag="PA2481" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251171.1" /db_xref="GeneID:879888" /translation="MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGE MVRQGQALFVETRKNAPHLVGNQLNCVNCHLDQGRRANSAPQWAAYPVYPAFRAKNNK VNTFAERLQGCFQFSMNGKVPAADSPEIKALTVYAYWLASQAPTGVSLPGRGYPDVAP PEGGYSIERGAKVYAAQCAICHGADGQGQMALGQTVFPPLWGAQSFNWGAGMHRINTA ASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERPQDPRLVDGSVEKTRQKFHANDGVN LYGQKVNGVLLGQGI" misc_feature complement(2799985..2800599) /locus_tag="PA2481" /note="Thiosulfate dehydrogenase TsdA, contains C-terminal cytochrome c domain [Inorganic ion transport and metabolism]; Region: TsdA; COG3258" /db_xref="CDD:442489" gene complement(2800782..2801435) /locus_tag="PA2482" /db_xref="GeneID:879889" CDS complement(2800782..2801435) /locus_tag="PA2482" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cytochrome C" /protein_id="NP_251172.1" /db_xref="GeneID:879889" /translation="MPVAHRLLFSLTALLAATAQAAVDGQKLYTQGGANPAAAACVTC HGADGMGLAAAGFPRLAGLPAAYLSKQLHDLKQGGSREHPVMKGIADALGDDEIQALA NTLAAMPAPKPVELSRVATPRSPGETLAVRGAWERNIPECVTCHGPAGSGVGEAFPPL QGQGEMYLSNQLRAWQLGTRRNDPNDLMGHIAKSLSEEEIRSVSQFFATLGQAGGQP" misc_feature complement(2801094..>2801324) /locus_tag="PA2482" /note="Cytochrome c553 [Energy production and conversion]; Region: CytC553; COG2863" /db_xref="CDD:442110" misc_feature complement(2800785..2801030) /locus_tag="PA2482" /note="Cytochrome c553 [Energy production and conversion]; Region: CytC553; COG2863" /db_xref="CDD:442110" gene complement(2801550..2802551) /locus_tag="PA2483" /db_xref="GeneID:880030" CDS complement(2801550..2802551) /locus_tag="PA2483" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251173.1" /db_xref="GeneID:880030" /translation="MTTLADIPLSMLDLVPVRTGGSVAEALHNSLDLARHVERLGFNR FWLAEHHNMDGIASSATALLIGHIAGGTSRIRVGSGGVMLPNHAPLVVAENFGTLETL YPGRIDLGLGRAPGADQATMRALRRDRLGNGDDFPEQVAELEMLLGPRRSQQSLLAVP GEGTQVPIWLLGSSLFSAHLAAQKGLPYAFASHFAPRYLHEALRIYRSNFQPSAVLDK PYAMIGVPLIAAPTDEEAEFLATTAFQRVLALIRGESLKQKPPVESMAPLWLPHEQDA VGSFFGLAVIGGPEKVRARLEILLEQTGADELIFTSDFYEHAHRLRSCEIVAELKGA" misc_feature complement(2801562..2802527) /locus_tag="PA2483" /note="luciferase family oxidoreductase, group 1; Region: oxido_grp_1; TIGR03558" /db_xref="CDD:274646" gene complement(2802702..2803316) /locus_tag="PA2484" /db_xref="GeneID:880031" CDS complement(2802702..2803316) /locus_tag="PA2484" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251174.1" /db_xref="GeneID:880031" /translation="MAKRGRPCGFDREQALRRALDVFWEAGYEGVTMAALKEAMGGIC APSMYAAYGSKEALFRSAVELYLSQECQLSKGAFALPTARESIAALLESAAVSYTTEG KPRGCLVDLSTTNFSPANKGVEDYLRDHRRRAARLLRERFARGVADGDVPAGADLDAL TSFYSSVLQGLSIQARDGASRQQLLAIGRCAMAAWDSLLAVEAA" misc_feature complement(2802807..2803283) /locus_tag="PA2484" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene 2803345..2803623 /locus_tag="PA2485" /db_xref="GeneID:880511" CDS 2803345..2803623 /locus_tag="PA2485" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251175.1" /db_xref="GeneID:880511" /translation="MVTPANSRKAGGGRLIHHRARYTPCRLFTSAGSPAGQTCSPRAD AHPSPGEPIMSSFSALASYFAASAFYSNAVTPTRPVQASAPAPTSEKK" misc_feature 2803504..2803620 /locus_tag="PA2485" /note="PA2485 family small membrane protein; Region: small_PA2485; NF041598" /db_xref="CDD:469482" gene 2803640..2803834 /locus_tag="PA2486" /db_xref="GeneID:880512" CDS 2803640..2803834 /locus_tag="PA2486" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251176.1" /db_xref="GeneID:880512" /translation="MLSARSRKAPTYGVTYVSLEDCTLHFETEYIIERRDGSLAHMPM RTPVSEREALQRLIESCIDD" misc_feature 2803664..2803813 /locus_tag="PA2486" /note="type III secretion system co-regulatory protein PtrC; Region: T3SS_coreg_PtrC; NF041597" /db_xref="CDD:469481" gene complement(2803860..2804132) /locus_tag="PA2487" /db_xref="GeneID:882890" CDS complement(2803860..2804132) /locus_tag="PA2487" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251177.1" /db_xref="GeneID:882890" /translation="MKAEDILPDRQDRIRLGGVEIRKGSVGAFIANARLLLEEELPAA QRRQAEEDLRALLPAIRALGLLELFELRDARLRTLVADWENAAGRS" gene 2804230..2804994 /locus_tag="PA2488" /db_xref="GeneID:882891" CDS 2804230..2804994 /locus_tag="PA2488" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251178.1" /db_xref="GeneID:882891" /translation="MLPDPLPVPLFALRIDRAASRTASHRHACGQLYCLERGLLVVED EHGRQALPPRQIAWIPPGHPHSAHSHGSLAGWSAYLAAEHCRDLPRHPGVLACSAFVA LIVERATRWPTGSAWSTERENLLRVLLDELRHAVPQRTRLPYPGDSRLRRIAEALLAN PGDPRPAAEWARWAGLSSRSLSRLFGAETGMSFAQWRQLARLHAAVERLAAGQAVGEV AWSLGYESPSSFASAFRTVFGETPSGYSSRANEALA" misc_feature 2804257..2804532 /locus_tag="PA2488" /note="AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain; Region: cupin_NimR-like_N; cd06124" /db_xref="CDD:380379" misc_feature 2804737..2804964 /locus_tag="PA2488" /note="Helix-turn-helix domain; Region: HTH_18; pfam12833" /db_xref="CDD:432818" gene 2805021..2805836 /locus_tag="PA2489" /db_xref="GeneID:880235" CDS 2805021..2805836 /locus_tag="PA2489" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251179.1" /db_xref="GeneID:880235" /translation="MSHANTPRDWVRRAPQHGAVERIEAYFAGHGYDPHRHDTYAIGQ TLAGVQSFRYRRSQRHSLPGGCLVLHPDELHDGEAGSQEGFRYRMLYVEPALIQQALG GRPLPFVRGGLSDDPRLIAASRALLQAMDTPLEPLEEQDALFELAHALDAVAGNRARG RRHFDFVAAERARQYIHAHLERPLGLDELAQVAQRERWSLSRDFRALFGTSPYRYLIQ RRLDIARRLMLGGQTLAEAALAAGFADQSHMTRHFGQSYGLPPARWLRMLGRA" misc_feature 2805069..2805461 /locus_tag="PA2489" /note="AraC-like ligand binding domain; Region: AraC_binding; pfam02311" /db_xref="CDD:396749" misc_feature <2805531..2805833 /locus_tag="PA2489" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene 2805917..2806291 /locus_tag="PA2490" /db_xref="GeneID:880236" CDS 2805917..2806291 /locus_tag="PA2490" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251180.1" /db_xref="GeneID:880236" /translation="MSTSTTQAINFAAKLALFDDRWQPRVIAQMNDYQFKLVKIEGDF VWHTHADTDETFIVLAGRLRIDFRDGAVHLGPGEMYVVPRGVEHKPFAEGEVRMLLVE PRGVRNTGDQGGERTAVNDLWI" misc_feature 2805944..2806225 /locus_tag="PA2490" /note="Bacillus subtilis YdbB and related proteins, cupin domain; Region: cupin_YdbB-like; cd02226" /db_xref="CDD:380355" misc_feature order(2805980..2805982,2805986..2805988,2806028..2806030, 2806046..2806048,2806055..2806057,2806061..2806063, 2806076..2806078,2806082..2806084,2806178..2806180, 2806184..2806186,2806214..2806216) /locus_tag="PA2490" /note="putative active site [active]" /db_xref="CDD:380355" gene complement(2806350..2807369) /locus_tag="PA2491" /db_xref="GeneID:880416" CDS complement(2806350..2807369) /locus_tag="PA2491" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_251181.1" /db_xref="GeneID:880416" /translation="MSRVIRFHQFGPPEVLKCEELPTPAPAAGEVLVRVQAIGVSWKD VLWRQNLAPEQAALPSGLGFELAGEVLAVGAGVGDLPLGSRVASFPAHTPDHYPAYGD VVLMPRAALAVYPEVLTPVEASVYYTGLLVAYFGLVDLAGLKAGQTVLITEAARMYGP VSIQLAKALGARVIASTKSAEEREFLREQGADKVVVTDEQDLVLEVERFTEGKGVNVI LDELGGPQMTLLGDVSATRGKLVLYGCNGGDESAFPACAAFKKHLQFYRHCLMDFTGH PEMGLERNDESVSKALAHIEQLTRDRLLKPVVDRVFEFDQVVEAHRYMETCPKRGRVV IHVAD" misc_feature complement(2806359..2807366) /locus_tag="PA2491" /note="Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family; Region: MDR2; cd08268" /db_xref="CDD:176229" misc_feature complement(order(2806560..2806568,2806638..2806643, 2806698..2806700,2806704..2806709,2806779..2806781, 2806824..2806826,2806836..2806841,2806893..2806898, 2806902..2806913,2806974..2806976,2807004..2807006, 2807232..2807234,2807241..2807249)) /locus_tag="PA2491" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176229" gene 2807469..2808512 /gene="mexT" /locus_tag="PA2492" /db_xref="GeneID:880417" CDS 2807469..2808512 /gene="mexT" /locus_tag="PA2492" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator MexT" /protein_id="NP_251182.1" /db_xref="GeneID:880417" /translation="MPVSDPMPLRHLARPRPVSHARLDGEPPRLQPLAPGNEERHEPK RPAPRRSEPADRVRDPDARTQRDPRRRETVPRPAGQPAISAALSRLRTLFDDPLFVRT GRSMEPTARAQEIFAHLSPALDSISTAMSRASEFDPATSTAVFRIGLSDDVEFGLLPP LLRRLRAEAPGFVLVVRRANYLLMPNLLASGEISVGVSYTDELPANAKRKTVRRSKPK ILRADSAPGQLTLDDYCARPHALVSFAGDLSGFVDEELEKFGRKRKVVLAVPQFNGLG TLLAGTDIIATVPDYAAQALIAAGGLRAEDPPFETRAFELSMAWRGAQDNDPAERWLR SRISMFIGDPDSL" misc_feature 2807706..>2807909 /gene="mexT" /locus_tag="PA2492" /note="leucine transcriptional activator; Reviewed; Region: leuO; PRK09508" /db_xref="CDD:181918" misc_feature 2807898..2808488 /gene="mexT" /locus_tag="PA2492" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to DntR, which is involved in the catabolism of dinitrotoluene; contains the type 2 periplasmic binding fold; Region: PBP2_DntR_like_2; cd08464" /db_xref="CDD:176153" misc_feature order(2807916..2807918,2807922..2807927,2807937..2807939, 2808111..2808113,2808213..2808215,2808414..2808416) /gene="mexT" /locus_tag="PA2492" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176153" misc_feature order(2807919..2807921,2807928..2807933,2807940..2807945, 2807952..2807957,2807961..2807966,2807973..2807978, 2807982..2807996,2808000..2808002,2808180..2808182, 2808264..2808278,2808285..2808290,2808297..2808302, 2808309..2808311,2808351..2808353) /gene="mexT" /locus_tag="PA2492" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176153" protein_bind 2808641..2808655 /experiment="Beta-gal reporter assay [PMID: 20727012]" /experiment="EMSA [PMID: 20727012]" /experiment="Site directed mutagenesis [PMID: 20727012]" /note="'Transcription factor binding site for NP_251182.; Evidence of regulation for: PA2493, PA2494, PA2495'" /bound_moiety="MexT" gene 2808743..2809987 /gene="mexE" /locus_tag="PA2493" /db_xref="GeneID:880212" CDS 2808743..2809987 /gene="mexE" /locus_tag="PA2493" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) multidrug efflux membrane fusion protein MexE" /protein_id="NP_251183.1" /db_xref="GeneID:880212" /translation="MEQSSHFSWRYPLALAAVLVLSACGKAPETTQGMAAPKVSVAEV IEQPLNEWDEFTGRLEAPESVELRPRVSGYIDRVAFHEGALVKKGDLLFQIDPRPFEA EVKRLEAQLQQARAAQARSVNEAQRGERLRASNAISAELADARTTAAQEAKAAVAATQ AQLDAARLNLSFTRITAPIDGRVSRAEVTAGNLVNSGETLLTTLVSTDKVYAYFDADE RVFLKYVELARQAGRDTRSESPVYLGLSSEDGNPHLGRLDFLDNQVNPRTGTIRGRAV FDNAKGEFTPGLYVRLKLVGSKTYAATLIKDEAVGTDLGKKFVLVLDGDNKTVYRTVE MGPKLEGLRIVRSGLSKGDRIVVNGLQRVRPGMQVDPQKVEMASADTLATLARLRQSV GDSEPPKVAASKDNATRNEPRG" misc_feature 2808872..2809873 /gene="mexE" /locus_tag="PA2493" /note="Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms]; Region: AcrA; COG0845" /db_xref="CDD:440606" gene 2810009..2813197 /gene="mexF" /locus_tag="PA2494" /db_xref="GeneID:882884" CDS 2810009..2813197 /gene="mexF" /locus_tag="PA2494" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) multidrug efflux transporter MexF" /protein_id="NP_251184.1" /db_xref="GeneID:882884" /translation="MNFSQFFIQRPIFAAVLSLLILIGGAISLFQLPISEYPEVVPPT VVVRANFPGANPKVIGETVASPLEQAITGVENMLYMSSQSTSDGKLTLTITFALGTDL DNAQVQVQNRVTRTEPKLPEEVTRLGITVDKASPDLTMVVHLTSPDNRYDMLYLSNYA VLNVKDELARLDGVGDVQLFGLGDYSLRVWLDPNKVASRNLTATDVVNAIREQNRQVA AGTLGAPPAPSDTSFQLSINTQGRLVTEEEFENIIIRAGANGEITRLRDIARVELGSN QYALRSLLNNKPAVAIPIFQRPGSNAIEISNLVREKMAELKHSFPQGMDYSIVYDPTI FVRGSIEAVVHTLFEALVLVVLVVILFLQTWRASIIPLAAVPVSLIGTFAVMHMLGFS LNALSLFGLVLAIGIVVDDAIVVVENVERNIGLGLKPVEATKRAMREVTGPIIATALV LCAVFIPTAFISGLTGQFYRQFALTIAISTVISAFNSLTLSPALAAVLLKGHHEPKDR FSVFLDKLLGSWLFRPFNRFFDRASHGYVGTVNRVLRGSSIALLVYGGLMVLTYFGFS STPTGFVPQQDKQYLVAFAQLPDAASLDRTEAVIKQMSEIALAQPGVADSVAFPGLSI NGFTNSPNSGIVFTPLKPFDERKDPSQSAGAIAAALNAKYADIQDAYIAIFPPPPVQG LGTIGGFRLQIEDRGNQGYEELFKQTQNIITKARALPELEPSSVFSSYQVNVPQIDAD IDREKAKTHGVAISDIFDTLQVYLGSLYANDFNRFGRTYQVNVQAEQQFRLEPEQIGQ LKVRNNLGEMVPLASFIKVSDTSGPDRVMHYNGFITAELNGAPAAGYSSGQAQAAIEK LLKEELPNGMTYEWTELTYQQILAGNTALFVFPLCVLLAFLVLAAQYESWSLPLAVIL IVPMTLLSAITGVILAGSDNNIFTQIGLIVLVGLACKNAILIVEFAKDKQEEGMDRVA AVLEACRLRLRPILMTSIAFIMGVVPLVISTGAGAEMRHAMGVAVFSGMIGVTFFGLL LTPVFYVLIRRFVENREARRAANDKGLPEVHA" misc_feature 2810015..2813128 /gene="mexF" /locus_tag="PA2494" /note="AcrB/AcrD/AcrF family; Region: ACR_tran; pfam00873" /db_xref="CDD:395701" gene 2813194..2814612 /gene="oprN" /locus_tag="PA2495" /db_xref="GeneID:882885" CDS 2813194..2814612 /gene="oprN" /locus_tag="PA2495" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="multidrug efflux outer membrane protein OprN" /protein_id="NP_251185.1" /db_xref="GeneID:882885" /translation="MIHAQSIRSGLASALGLFSLLALSACTVGPDYRTPDTAAAKIDA TASKPYDRSRFESLWWKQFDDPTLNQLVEQSLSGNRDLRVAFARLRAARALRDDVAND RFPVVTSRASADIGKGQQPGVTEDRVNSERYDLGLDSAWELDLFGRIRRQLESSDALS EAAEADLQQLQVSLIAELVDAYGQLRGAQLREKIALSNLENQKESRQLTEQLRDAGVG AELDVLRADARLAATAASVPQLQAEAERARHRIATLLGQRPEELTVDLSPRDLPAITK ALPIGDPGELLRRRPDIRAAERRLAASTADVGVATADLFPRVSLSGFLGFTAGRGSQI GSSAARAWSVGPSISWAAFDLGSVRARLRGAKADADAALASYEQQVLLALEESANAFS DYGKRQERLVSLVRQSEASRAAAQQAAIRYREGTTDFLVLLDAEREQLSAEDAQAQAE VELYRGIVAIYRSLGGGWQPSA" misc_feature 2813242..2814594 /gene="oprN" /locus_tag="PA2495" /note="efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; Region: outer_NodT; TIGR01845" /db_xref="CDD:273830" gene complement(2814767..2815282) /locus_tag="PA2496" /db_xref="GeneID:882886" CDS complement(2814767..2815282) /locus_tag="PA2496" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251186.1" /db_xref="GeneID:882886" /translation="MSRPTLQVDLLVESFNYKAWSDRRTLDAIARIDAEAFPASLAFA LQQLNHMAIVEELFRARLLGEPAPHQQTNSEVVPGYDVLRRRLEDSAAWFAGYVAELP LERRGEWLRFRFADGRDGGMTRQEILFHIVNHGTYHRGAIGHALDLAGAPRPADTYTL YIHSAQPERRE" misc_feature complement(2814779..2815246) /locus_tag="PA2496" /note="DinB family; Region: DinB; pfam05163" /db_xref="CDD:398707" gene complement(2815341..2816219) /locus_tag="PA2497" /db_xref="GeneID:882887" CDS complement(2815341..2816219) /locus_tag="PA2497" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251187.1" /db_xref="GeneID:882887" /translation="MLDLVLLRTFVSVVDTGNFTRAGEHLHLTQSTVSQQVIRLEQNL GCRLLDRSQRQVLPTEEGERLLGYARRLLRLSDEASEALSPAHGDGVLRLGVPEDLAG EVLMPVLTRFTEERPRLRLEVESGLSHHLLRLYRSGELDLLLVKQWGADSDCHARWAE PLGWFGSAARPFGEGSPEEPVPLVVFPVGALYRQEMIHALESIGRRWRIGYSSASLAS LVAAVGAGLGVSLLPLGCVGPEHRLLGAQAGFPPIAGLELALYARPELDSAGRTLRDR LRDLCDARLEGLQGER" misc_feature complement(2815416..2816216) /locus_tag="PA2497" /note="DNA-binding transcriptional repressor LrhA; Provisional; Region: PRK15092" /db_xref="CDD:237907" gene 2816347..2816979 /locus_tag="PA2498" /db_xref="GeneID:882808" CDS 2816347..2816979 /locus_tag="PA2498" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251188.1" /db_xref="GeneID:882808" /translation="MLVCAAFSGGAGASDAGALLEAARRGDTAQVASLLERKVEVDAP SADGSTPLLLATANDHLAVARQLIEAGADVNRQNSRLDSPYLLAGAEGRLEILRLTLL HGADLKSTNRYGGTALIPACERGHVEVVKTLLQAGVDPNHVNKLGWTGLLEAILLSDG GPRHQEIVRLLIDAGADVNLADADGVSPLAHARQRGQGGIERLLLAAGAQ" misc_feature 2816359..2816973 /locus_tag="PA2498" /note="Ankyrin repeat [Signal transduction mechanisms]; Region: ANKYR; COG0666" /db_xref="CDD:440430" misc_feature 2816401..2816481 /locus_tag="PA2498" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature 2816485..2816580 /locus_tag="PA2498" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature order(2816590..2816592,2816602..2816607,2816614..2816622, 2816626..2816631,2816641..2816643,2816650..2816652, 2816677..2816679,2816683..2816685,2816689..2816691, 2816701..2816706,2816713..2816721,2816725..2816730, 2816740..2816742,2816749..2816751,2816776..2816778, 2816782..2816784,2816788..2816790,2816800..2816805, 2816812..2816820,2816839..2816844,2816854..2816856, 2816863..2816865,2816890..2816892) /locus_tag="PA2498" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:293786" misc_feature 2816590..2816679 /locus_tag="PA2498" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature 2816683..2816778 /locus_tag="PA2498" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature 2816782..2816892 /locus_tag="PA2498" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature 2816896..2816973 /locus_tag="PA2498" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" gene 2816997..2817452 /locus_tag="PA2499" /db_xref="GeneID:882809" CDS 2816997..2817452 /locus_tag="PA2499" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="deaminase" /protein_id="NP_251189.1" /db_xref="GeneID:882809" /translation="MSDETFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIH ETHDPSAHAELQAIRQASQALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYS NEDGEAFGLSTATLYAEMARPPQRQSLPLRALRPAGEEGLYRQWRQRQA" misc_feature 2816997..2817443 /locus_tag="PA2499" /note="tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]; Region: TadA; COG0590" /db_xref="CDD:440355" gene 2817449..2818675 /locus_tag="PA2500" /db_xref="GeneID:882882" CDS 2817449..2818675 /locus_tag="PA2500" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_251190.1" /db_xref="GeneID:882882" /translation="MSARIPSGGQAATGVGAAEVSWVGLLVIFCLGINLRPILTGIGP LLEEITAGTGLGFQGASLLTVLPVLCMGLVALLLPWLGRWLAEHRGIVCGLLAIAAAC LWRLELDSGLALIASAALAGSGVAIIQALVPGVVKRWFPRRVPAAMGLYSASLMAGGG TAAVLSPRIAEHFSNWQAGLGAWAVPALLALLLWMFARPREVLPSAGEGPVRHFFGNR RGWLLAVYFGLINGGYTSMVAWLPVYYRQLGWSAQDSGGLVGIMTIFQVLAALSVPLL IRRRLDRRPWLLAALLVQLGGFCGLLLMPLQHAALWVALIGYGLGACFALSLTLTLDH LHEPRAAGSLAAFVQGIGFIITGIVPYLTGWLRDATGSFQASWLLLAASVVAMLLVTL RFAPSGYARAMGETRD" misc_feature 2817521..2818636 /locus_tag="PA2500" /note="Cyanate transport protein CynX and similar proteins of the Major Facilitator Superfamily of transporters; Region: MFS_CynX_like; cd17410" /db_xref="CDD:340968" misc_feature order(2817551..2817556,2817563..2817568,2817575..2817577, 2817671..2817673,2817821..2817826,2817830..2817838, 2817845..2817847,2817902..2817904,2817911..2817916, 2817923..2817925,2818127..2818129,2818136..2818141, 2818148..2818156,2818163..2818165,2818244..2818246, 2818256..2818258,2818403..2818408,2818418..2818420, 2818430..2818432,2818481..2818483,2818490..2818495, 2818502..2818507,2818514..2818516) /locus_tag="PA2500" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340968" gene complement(2818719..2818886) /locus_tag="PA2501" /db_xref="GeneID:882883" CDS complement(2818719..2818886) /locus_tag="PA2501" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251191.1" /db_xref="GeneID:882883" /translation="MDSYGVTFAIIVLGMLFIGTGFTKRDTPFGLFLMWVGVICMLAI ISYRIYIATHY" gene complement(2818990..2820489) /locus_tag="PA2502" /db_xref="GeneID:882814" CDS complement(2818990..2820489) /locus_tag="PA2502" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251192.1" /db_xref="GeneID:882814" /translation="MGQQELAFGGGEFHSLWSCRFGAATLARRGCAFRNALAIMRGFP SALAGVRRTMHTLQQLRSGELAGATRLDLSCGLREFPREIFELADSLEVLNLSGNALD SLPDDLGRLHRLKVLFCSANDFDELPAAVGDCPALSMVGFKSNRIERVPAAALPPALR WLILTDNRIATLPEELGRRPLQKLMLAGNRLEALPESMAACEGLELLRIAANRFQRLP AWLATLPRLAWLAYAGNPLCRLPALADSGIAALDWSELSLDGLIGEGASGVIHRAGWH QPDGSTRTVALKLFKGEVTSDGTPASEMAACLAAGRHAQLIEVLGQLAGHPQGRDGLV LELLDDAYRNLAGPPSLESCTRDVYPPGLRFELATALRLAASLAALMAHLHGRGISHG DFYAHNILWREDGACLLGDFGAASFLPDDAVLAGALRRLEVRAFACLLEELLERSEAP PGQASLSAALVELQRRCALPRVSERPDFGEIQAILRDLAARSQAFPQVR" misc_feature complement(<2819755..>2820303) /locus_tag="PA2502" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature complement(2820220..2820285) /locus_tag="PA2502" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(2820151..2820219) /locus_tag="PA2502" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(2820082..2820150) /locus_tag="PA2502" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(2820016..2820081) /locus_tag="PA2502" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(2819956..2820015) /locus_tag="PA2502" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(2819881..2819949) /locus_tag="PA2502" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(2819812..2819880) /locus_tag="PA2502" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(2819740..2819811) /locus_tag="PA2502" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(<2819221..2819718) /locus_tag="PA2502" /note="Serine/threonine protein kinase [Signal transduction mechanisms]; Region: SPS1; COG0515" /db_xref="CDD:440281" misc_feature complement(<2819194..>2819337) /locus_tag="PA2502" /note="tRNA A-37 threonylcarbamoyl transferase component Bud32 [Translation, ribosomal structure and biogenesis]; Region: Bud32; COG3642" /db_xref="CDD:442859" gene 2820448..2821701 /locus_tag="PA2503" /db_xref="GeneID:882815" CDS 2820448..2821701 /locus_tag="PA2503" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251193.1" /db_xref="GeneID:882815" /translation="MELSPAERQLLLAHRLAVFDGCVVYDAQPPVSAEHVQRLAEGLA GPIPEDLLRLWRTCFGGRLGYDLEVDYDGHRHPFSFSELFYPDSDGYHDLWGWIEHER ELAAEAAAEEGRDWNGKLAYLPFGGFEYLERLYVCVEPGPEHGAVIAWSHGLPPAWAG RLHQDSVTRLADDVGGLFRLLSFEQDPFDAENACGVADELLEALDALEAAGEPGKALK GRLEVLLRQRILDWRPALADGSLAAEPRLRQLALAEAAQDGDIDLLQRLRDAGCDFAE TLRGRGGVLEACLARGRLEAARWLLDQGVAVHQDSLQIGAAHLDAVLAERLLRLGAIS DPNTVLLALQYGDADAARIMARPLLEESPARANALRLALASRAERERSDARRVRSGKM GSNRSPDDYLALAERLERFLAELPG" misc_feature 2820535..2820906 /locus_tag="PA2503" /note="SMI1 / KNR4 family (SUKH-1); Region: SMI1_KNR4; cl01747" /db_xref="CDD:445532" misc_feature 2821033..>2821506 /locus_tag="PA2503" /note="Ankyrin repeat [Signal transduction mechanisms]; Region: ANKYR; COG0666" /db_xref="CDD:440430" gene complement(2821705..2822322) /locus_tag="PA2504" /db_xref="GeneID:882987" CDS complement(2821705..2822322) /locus_tag="PA2504" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251194.1" /db_xref="GeneID:882987" /translation="MASWTLVDASAIAVRHPYTFYKPDAETIDRVAAGESVKLIFAFD TDNPDAPRAERLWVTVEGIEADGAFSGRLDNYPQYIRDLSLGERIVFEARHIINTEHD PRETPISRYARRCFVTRRVIDEGKAVGYLYREAPEEENDSGWRLMAGDESDDYMNTAG TTAYVSLGSVLNADDSILPLLDAPPGRAFERLADGSFIEVQGPEG" misc_feature complement(<2822035..>2822217) /locus_tag="PA2504" /note="Uncharacterized protein conserved in bacteria (DUF2314); Region: DUF2314; cl19625" /db_xref="CDD:473197" misc_feature complement(2821726..2821980) /locus_tag="PA2504" /note="Protein of unknown function (DUF2185); Region: DUF2185; pfam09951" /db_xref="CDD:462932" gene complement(2822574..2823920) /gene="opdT" /locus_tag="PA2505" /db_xref="GeneID:882988" CDS complement(2822574..2823920) /gene="opdT" /locus_tag="PA2505" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="tyrosine porin OpdT" /protein_id="NP_251195.1" /db_xref="GeneID:882988" /translation="MQGDGKKRLWTLPLLLGAGLMASAVAEENAERSKEGFIEGSEVN LLLRNFYFNRDFRKGQSSPAGGGYTEEWVQGFMANFSSGFTQGTLGVGIDAFAQLGVR LDSGGGRSGAGGSVDLLPYDDQGRPQDDYSRAGGAVKLRWYGTVLRVGDVFPETPVIQ YGNSRLFPSSFRGFTLVNDSLAKGLTLQAGKLNSMTQPNSTSGSDDFYSFYTGRRIDS PWVAYAGGDYQATEHWSVSLYGSRQKDAWDQYYAGTSFNYPLDDKLSLLGGANYYKVK DQGRQVMGELDNDIWSVRGGFAYGPHQVLLSYQRNNGDDDFDYLRQTDSIYLDNSIQY SDFNSPKERSLMLRYDLDMAAFGVPGLSFMTRYGKGWDADYSNANSVYMRTDANGNPL TNQGRWERDVEVKYVVQGGAAKDLAFRVRQATVRSDSFESDLDEVRLIVEYPLQVL" misc_feature complement(2822583..2823818) /gene="opdT" /locus_tag="PA2505" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene 2824283..2824501 /locus_tag="PA2506" /db_xref="GeneID:879146" CDS 2824283..2824501 /locus_tag="PA2506" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251196.1" /db_xref="GeneID:879146" /translation="MKIIPMLLAALLATGAATAQAQDGSERSWQYNAEFRAAQKELRE KRLQKQQLEAQAQKTDRSKCAERKNGNG" gene complement(2824659..2825591) /gene="catA" /locus_tag="PA2507" /db_xref="GeneID:879147" CDS complement(2824659..2825591) /gene="catA" /locus_tag="PA2507" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="catechol 1,2-dioxygenase" /protein_id="NP_251197.1" /db_xref="GeneID:879147" /translation="MTVKISQTADVQRFFEEASGQLNERGDPRTKALVRRILDDTAKL IEEMQVTPDEFWKAVDYLNRLGSRQEAGLLAAGLGLEHYLDLLLDAQDAEAGLTGGTP RTIEGPLYVAGAPLSDGEARMDDGRDAGTVMFLQGRVSGPDGQPLAGAIVDVWHANTQ GTYSYFDSSQSEYNLRRRIRTDADGRYRARSIVPSGYGCPSDGPTQELLDRLGRHGQR PAHIHFFVSAPGHRHLTTQINLAGDRYLWDDFAYATRDGLIGDLRFNDDPAAARDRGV EGGRFAELDFDFQLQASPAPAAERRSQRPRALQG" misc_feature complement(2824722..2825570) /gene="catA" /locus_tag="PA2507" /note="Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain; Region: Peptidase_M14NE-CP-C_like; cl21470" /db_xref="CDD:473874" misc_feature complement(order(2824842..2824844,2824923..2824925, 2824929..2824931,2824938..2824940,2825001..2825003, 2825103..2825105,2825127..2825129)) /gene="catA" /locus_tag="PA2507" /note="active site" /db_xref="CDD:238241" gene complement(2825636..2825926) /gene="catC" /locus_tag="PA2508" /db_xref="GeneID:882967" CDS complement(2825636..2825926) /gene="catC" /locus_tag="PA2508" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="muconolactone delta-isomerase" /protein_id="NP_251198.1" /db_xref="GeneID:882967" /translation="MLFHVKMTVKLPVDMDPQQAERLKAEEKEMAQRLQREGSWRHLW RIAGHYANYSLFDLPSVEALHDTLTRLPLFPYMDIEIDGLCRHPSSIHADDR" misc_feature complement(2825654..2825923) /gene="catC" /locus_tag="PA2508" /note="Muconolactone delta-isomerase; Region: MIase; cl01992" /db_xref="CDD:470428" gene complement(2825958..2827079) /gene="catB" /locus_tag="PA2509" /db_xref="GeneID:882968" CDS complement(2825958..2827079) /gene="catB" /locus_tag="PA2509" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="muconate cycloisomerase I" /protein_id="NP_251199.1" /db_xref="GeneID:882968" /translation="MSQAVIQSLESIIVDLPTIRPHKLAMHTMNRQTLVILRLRCSDG IEGLGEATTIGGLAYGSESPESIKSNLDAHFAPLLLGQPADNVNAAMQRLDRHIRGNT FARSAVETALLDAHGKRLGLAVSELLGGRLHDSLEVAWTLASGDTGRDIEEAGRMLDL RRHRHFKLKIGAGEVDADVAHAIAIKRALGERASVRVDVNQAWDEGVAQRACATLGDN GIALIEQPIARHNRVGLARLSSRGGAPIMADEAIESVEDAFHLAREGAAPVFALKIAK NGGPRAVLRSAAIAEAAGIGLYGGTMLEGGIGTLAAAHAFVTLDRLAWHSELFGPLLL TEDILLESPRYQDFHLHVPRAPGLGLALDEERLARFRRR" misc_feature complement(2825973..2827064) /gene="catB" /locus_tag="PA2509" /note="Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway. This pathway is used in soil microbes to breakdown lignin-derived...; Region: MLE; cd03318" /db_xref="CDD:239434" misc_feature complement(order(2826126..2826128,2826216..2826218, 2826312..2826314,2826390..2826392,2826687..2826695, 2826702..2826704,2826777..2826779,2826783..2826791, 2826816..2826818,2826822..2826827,2826858..2826860, 2826870..2826872,2826885..2826887,2826891..2826893, 2826897..2826899)) /gene="catB" /locus_tag="PA2509" /note="octamer interface [polypeptide binding]; other site" /db_xref="CDD:239434" misc_feature complement(order(2826099..2826101,2826261..2826263, 2826330..2826335,2826408..2826410,2826480..2826482, 2826486..2826488,2826573..2826575,2826579..2826581)) /gene="catB" /locus_tag="PA2509" /note="active site" /db_xref="CDD:239434" gene 2827241..2828113 /gene="catR" /locus_tag="PA2510" /db_xref="GeneID:882821" CDS 2827241..2828113 /gene="catR" /locus_tag="PA2510" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcriptional regulator CatR" /protein_id="NP_251200.1" /db_xref="GeneID:882821" /translation="MELRHLRYFQALARTLNFTRAAEQLHIAQPPLSRQIQQLEEMLG VALLERGRPLRLTEAGRFFHEQSATLLDQLESICDSTRRIGQGQRQWFGIGFVPSALY GVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGRIDIGFGRIRIDDPAIRQSVLSE EPLVAALPAGHPLLGQPLSLERLSREPFVLYPGQPRPSYADHVLALFATHGLSLRVTQ WANEMQTAIGLVAAGLGATLVPASVQLQHRDDVAYQALADASLTSPIIVSRRQGDGSP HLRRCLALIGREDA" misc_feature 2827247..2827423 /gene="catR" /locus_tag="PA2510" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 2827508..2828095 /gene="catR" /locus_tag="PA2510" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in benzoate catabolism; contains the type 2 periplasmic binding fold; Region: PBP2_BenM_CatM_CatR; cd08445" /db_xref="CDD:176136" misc_feature order(2827526..2827528,2827541..2827546,2827556..2827561, 2827565..2827570,2827577..2827579,2827598..2827600, 2827604..2827606,2827610..2827612,2827742..2827744, 2827901..2827906,2827910..2827915,2827922..2827927, 2827931..2827936) /gene="catR" /locus_tag="PA2510" /note="dimerizarion interface [polypeptide binding]; other site" /db_xref="CDD:176136" misc_feature order(2827529..2827531,2827535..2827537,2827619..2827621, 2827673..2827678,2827811..2827816,2827829..2827831, 2827835..2827837,2827907..2827909) /gene="catR" /locus_tag="PA2510" /note="CrgA pocket [active]" /db_xref="CDD:176136" misc_feature order(2827529..2827531,2827619..2827621,2827673..2827678, 2827811..2827816,2827832..2827837,2827907..2827909) /gene="catR" /locus_tag="PA2510" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176136" gene complement(2828122..2829123) /locus_tag="PA2511" /db_xref="GeneID:882822" CDS complement(2828122..2829123) /locus_tag="PA2511" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251201.1" /db_xref="GeneID:882822" /translation="MMRTHPVADRGDLHADHLDLAAARSWMSKVCGPHRLEAASPGLV QFQHHGNVLKSMCTTLGYIGYGTDVTITVEDAAAFNAYSLSLPLSGEQELCRGGLRLL SDVRRGVIIAPNERQELSIAGDCRKLQVVIGRTAMRKVLEEMLQRPIDTPLRFDPEMD ALDGASASWWRTVRHISEEMARSELYAQAFFSSDLERALIKGLILAQPNNYSEALQQG LGGRPPHYLLRAREFLQANARETLSLEDVERAAGVSRFKLFEGFRRYFGVSPMSYLKH YRLAAVREEILASGGARSISTIALGWGFSHLGRFSVDYRKRFEETPSMTQRRAARRS" misc_feature complement(2828524..2829057) /locus_tag="PA2511" /note="AraC-binding-like domain; Region: AraC_binding_2; pfam14525" /db_xref="CDD:434015" misc_feature complement(2828140..2828379) /locus_tag="PA2511" /note="Helix-turn-helix domain; Region: HTH_18; pfam12833" /db_xref="CDD:432818" gene 2829440..2830834 /gene="antA" /locus_tag="PA2512" /db_xref="GeneID:882892" CDS 2829440..2830834 /gene="antA" /locus_tag="PA2512" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="anthranilate dioxygenase large subunit" /protein_id="NP_251202.1" /db_xref="GeneID:882892" /translation="MNATRRSLEQWRDYVGGCLDFRPEEGIFRIARDMFTEPELFDLE MELIFEKNWIYACHESELARPHDFVTLRAGRQPLIVTRDGNGQLHALVNACQHRGATL VRVGKGNQSTFTCPFHAWCYKNDGRLVKVKAPGEYPEGFDKATRGLKKARIQSYRGFV FVSLDVAGEDDLVDFLGDARVFLDMLVAQSPSGELEVLPGTSTYTYEGNWKLQNENGL DGYHVSTVHYNYVATVQHRQQVEAERGGVAATLDYSKLGAGDAATDDGWFSFANGHSV LFSEMPNPAVRPGYASVMPRLVAEYGQARAEWMMHRLRNLNLYPSLFVIDQISSQLRI VRPLAWNRTEIVSQCIGVKGESDADRENRIRQFEDFFNVSGMGTPDDLVEFREAQRGF QARLERWSDISRGHGKWLEGATPNSQALGIAPLLTGTEITHEGLYVNQHAHWRRFLLD GLERLALRAKEVTP" misc_feature 2829482..2830795 /gene="antA" /locus_tag="PA2512" /note="anthranilate 1,2-dioxygenase, large subunit; Region: anthran_1_2_A; TIGR03228" /db_xref="CDD:132272" gene 2830831..2831322 /gene="antB" /locus_tag="PA2513" /db_xref="GeneID:882978" CDS 2830831..2831322 /gene="antB" /locus_tag="PA2513" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="anthranilate dioxygenase small subunit" /protein_id="NP_251203.1" /db_xref="GeneID:882978" /translation="MNAGLQYRVEQFLYRHAELCDAQDWDGYLAQFDEQCEFHLPQWE SEQRYTRDPKRETSLIYYPSRAGLEDRVFRIRTGKAASTVPMPRTLHQIGNVRIAEEG DGLLRVRVNWQTLFQRLDQTGSFFGHATYRLKPHGEAWLIARKHIVLLNDRIDSVLDF YHL" misc_feature 2830855..2831319 /gene="antB" /locus_tag="PA2513" /note="anthranilate 1,2-dioxygenase, small subunit; Region: anthran_1_2_B; TIGR03231" /db_xref="CDD:132275" misc_feature order(2830963..2830968,2831002..2831010,2831014..2831019, 2831041..2831043,2831050..2831052,2831059..2831061, 2831182..2831187,2831284..2831286,2831290..2831292, 2831299..2831310) /gene="antB" /locus_tag="PA2513" /note="inter-subunit interface [active]" /db_xref="CDD:238357" gene 2831341..2832363 /gene="antC" /locus_tag="PA2514" /db_xref="GeneID:882979" CDS 2831341..2832363 /gene="antC" /locus_tag="PA2514" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="anthranilate dioxygenase reductase" /protein_id="NP_251204.1" /db_xref="GeneID:882979" /translation="MNHKVALSFADGKTLFLPVGHDDLLLDAALRHGINLPLDCREGV CGTCMGRCEAGSYSLDYADEDTLSAADLEQRKVLACQTRVRSDAAFYFDFASTLCHAA AAQAHSGLVRELRLLSEDTALLRLDAGAAGRQLDFLPGQYARLQVPGSDCRRAYSFAN RPNPQNHLQFLIRLLPGGAMSDYLRQGCRVGDEIRFEAPLGTFYLRQVERPLLLVAGG TGLSAFLGMLDELAERGCEWPVHLYYGVRRAADLCELQRIAGYAERLPGFRFVPVLSE ADADWDGRRGYLHEHFDAARLRDEAFDLYLCGPPPMVEAVRQWLRERSLEHLRLYLEK FTESGD" misc_feature 2831341..2832360 /gene="antC" /locus_tag="PA2514" /note="anthranilate 1,2-dioxygenase electron transfer component AntC; Region: antC; PRK11872" /db_xref="CDD:183350" gene complement(2832369..2833130) /gene="xylL" /locus_tag="PA2515" /db_xref="GeneID:880342" CDS complement(2832369..2833130) /gene="xylL" /locus_tag="PA2515" /EC_number="1.3.1.25" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase" /protein_id="NP_251205.1" /db_xref="GeneID:880342" /translation="MNDRFRDKVALVSGAAQGIGLGVARRLLEEGARVVAVDRSELVH ELAGDACLCLTADLERYAECQRVLERTLERFGRLDILVNNVGGTLWAKPYQHYAEDEI EAELRRSLLPTLWCCRAALPAMLGQGSGAIVNVSSVATRGVNRVPYGAAKGGVNALTA CLAFETADQGIRVNAVAPGGTDAPPRRIPRNAAAQSEEERRWYRQIVEQTLDSSLMKR YGSIDEQVAAILFLASDEASYITGVTLPVAGGDLG" misc_feature complement(2832372..2833130) /gene="xylL" /locus_tag="PA2515" /note="1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional; Region: benD; PRK12823" /db_xref="CDD:183772" gene complement(2833155..2834168) /gene="xylZ" /locus_tag="PA2516" /db_xref="GeneID:880343" CDS complement(2833155..2834168) /gene="xylZ" /locus_tag="PA2516" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="toluate 1,2-dioxygenase electron transfer subunit" /protein_id="NP_251206.1" /db_xref="GeneID:880343" /translation="MNHRIALNFEDGVTRFIHAAPGETVADAAYRQGINIPLDCRDGA CGTCKCLAEAGRYALGQDYIDDALSAEEAARGYVLTCQMRAESDCVLRVPASSTLCRT GQARYEARISEVRQLSPSTIGLSLRGEALASLAFLPGQYVNLQVPGSEQRRAYSFSSL AKDGEVSFLIRNVPGGLMSGFLSGTARAGDSLAMDGPLGSFYLREIHRPLLMLAGGTG LAPFTAMLERIAEQGSAHPLHLVYGVTHDVDLVGLERLEAFAERIPGFTWSACVASAD SDYPRKGYVTEHIAAQHLHEGDVDIYLCGPPPMVEAVERYLREQGVRPANFYYEKFAA SAA" misc_feature complement(2833164..2834162) /gene="xylZ" /locus_tag="PA2516" /note="benzoate 1,2-dioxygenase electron transfer component BenC; Region: BenC; NF040810" /db_xref="CDD:468751" gene complement(2834202..2834690) /gene="xylY" /locus_tag="PA2517" /db_xref="GeneID:882902" CDS complement(2834202..2834690) /gene="xylY" /locus_tag="PA2517" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="toluate 1,2-dioxygenase subunit beta" /protein_id="NP_251207.1" /db_xref="GeneID:882902" /translation="MSLGYDALRDFLYREARYLDDKDWDAWLALYAADASFWMPSWDD RDQLTEDPQREISLIWYGNRGGLEDRVFRIRTERSSATLPDTRTSHNLSNIELLGEDD GICRVRCNWHTLSYRYKTVDSYFGTTFYDLDVRGESPLIKAKKVILKNDYVRQLIDVY HV" misc_feature complement(2834205..2834669) /gene="xylY" /locus_tag="PA2517" /note="Nuclear transport factor 2 (NTF2-like) superfamily. This family includes members of the NTF2 family, Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases, and the beta subunit of Ring hydroxylating dioxygenases. This family is a classic example of...; Region: NTF2_like; cl09109" /db_xref="CDD:471850" misc_feature complement(order(2834214..2834225,2834232..2834234, 2834238..2834240,2834337..2834342,2834463..2834465, 2834472..2834474,2834481..2834483,2834505..2834510, 2834514..2834522,2834556..2834561)) /gene="xylY" /locus_tag="PA2517" /note="inter-subunit interface [active]" /db_xref="CDD:238357" gene complement(2834687..2836054) /gene="xylX" /locus_tag="PA2518" /db_xref="GeneID:882903" CDS complement(2834687..2836054) /gene="xylX" /locus_tag="PA2518" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="toluate 1,2-dioxygenase subunit alpha" /protein_id="NP_251208.1" /db_xref="GeneID:882903" /translation="MSLGSDYLRSLLEEDPERGVYRCKREMFTDPRLFELEMKHIFEG NWVYLAHESQVAGVNDYLTTQIGRQSIVIARNRDGQLNAFINACSHRGAMLCRHKSGN RSSYTCPFHGWTFNNSGKLLKVKDPAEAGYPQGFNCEGSHDLTRVARFESYRGFLFGS LNPDVRPLAEHLGESAKIIDMIVDQSPEGLEVLRGSSSYVYEGNWKLTAENGADGYHV SSVHWNYAATQSQRQQRDAADPLRTMSAAGWARQGGGFYSFEHGHMLLWSRWANPEDR PAFERRAELARDFGEARADWMIENSRNLCLYPNVYLMDQFSSQIRIARPLSVDRTEIT IYCIAPKGESAEARARRIRQYEDFFNVSGMATPDDLEEFRSCQQGYQGSVVGWNDLSR GAEHWIEGADAAAAAIDLRPRLSGVRTEDEGLFVLQHRYWQEALLAALERERTQRVAL REVAS" misc_feature complement(2834735..2836033) /gene="xylX" /locus_tag="PA2518" /note="benzoate 1,2-dioxygenase, large subunit; Region: benzo_1_2_benA; TIGR03229" /db_xref="CDD:132273" gene complement(2836171..2837127) /gene="xylS" /locus_tag="PA2519" /db_xref="GeneID:882893" CDS complement(2836171..2837127) /gene="xylS" /locus_tag="PA2519" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcriptional regulator XylS" /protein_id="NP_251209.1" /db_xref="GeneID:882893" /translation="MNASLLSERSRVFERADPYAVSGYVNRHVGTHCIRLPAAGRPQA SLDHRTFASLDLCRISYGAAVRVTSPALESIFHLQILLRGHCLWRGGGQEHALAPGEL LLINPDDPVDLTYSADCEKFIVKLPCALLEAICAEQRWSHPARGVRFLEHRYRLDQLE GFVGLLALVCREAESGERLARVDSHFEQILGSKLLTLLKTNVSREDPGDAQVVFARLD AYIRRHLQSEIEVAALAEQAHMSTRSLYALFERQLGESPRQYIRRLRLERIRACLEDP GCRVRNLTELALDFGFAHLGRFAEQYRRQFGELPSETLRRRA" misc_feature complement(2836543..2837055) /gene="xylS" /locus_tag="PA2519" /note="AraC-binding-like domain; Region: AraC_binding_2; pfam14525" /db_xref="CDD:434015" misc_feature complement(2836180..2836428) /gene="xylS" /locus_tag="PA2519" /note="Helix-turn-helix domain; Region: HTH_18; pfam12833" /db_xref="CDD:432818" gene complement(2837334..2840489) /gene="czcA" /locus_tag="PA2520" /db_xref="GeneID:880332" CDS complement(2837334..2840489) /gene="czcA" /locus_tag="PA2520" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) divalent metal cation efflux transporter CzcA" /protein_id="NP_251210.1" /db_xref="GeneID:880332" /translation="MFERIIQFAIEQRWLVLLAVLGMAGVGIGSYQKLSIDAVPDITN VQVQINTAAPGYSPLEVEQRITYPVETVMAGLPGLQETRSLSRPGISQVTVIFEEGTD IYFARQQVNERLSTAREQLPEDISPTLGPISTGLGEIYLWTVEAEEGATKEDGSAYTP TDLRTIQDWIIRPQLRNVKGVAEINTIGGYAKQFLIAPDPKKLAAYKLTLGDLQNAVL RNNENVGAGYIERRGEQLLIRAPGQVKDMDDIRGIIVSNVDGVPIRIRDVAEVGLGKE LRTGAATENGREVVLGTVFMLIGENSREVAQAVGQRLEEINRTLPKGVKAITVYDRTT LVDKAVATVKKNLVEGAALVIAVLFLFLGNIRAALITATIIPLSMLFTFTGMVGNRVS ANLMSLGALDFGIIVDGAVVIVENAIRRLAHAQAHHGRQLTRAERFHEVFAASREARR ALVFGQIIIMVVYLPIFALTGVEGKMFHPMAFTVVTALLGAMILSVTFVPAAIALFIT GKVKEEENFVMRRARLAYEPALRWVLGHRALVVGGALGAILLTGLVASRMGSEFIPSL SEGDFAMQGLRVPGTSLTQSVEMQQTLERKLMGKFPEIERVFARTGTAEIASDLMPPN ASDSYVMLKPQSQWPDPKKSREALLEELQAAALEVPGSVYEFSQPIQLRFNELISGVR SDVAVKVFGDDMQVLNDTAEKISKVLQGIDGASEVKVEQTTGLPVLTVDIDRDKAARF GLNVGDIQDTVATALGGRNAGTLFEGDRRFDIVIRLPETLRADLPALSNLLIPLPPNN LARIDFIPLSDVARLDLSPGPNQISRENGKRRIVVSANVRGRDIGSFVLEAQQKLQDG VKIPAGYWTTWGGQFEQLQSAAKRLQVVVPVALLLVFTLLFAMFNNVKDGLLVFTGIP FALTGGVLALWLRGIPLSISAAVGFIALSGVAVLNGLVMISFIRNLLQEGRSLDQAVW EGAITRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTMLTLLVLP VLYRWTHGRDAGPREETPAAG" misc_feature complement(2837337..2840489) /gene="czcA" /locus_tag="PA2520" /note="heavy metal efflux pump, CzcA family; Region: 2A0601; TIGR00914" /db_xref="CDD:129992" gene complement(2840512..2841966) /gene="czcB" /locus_tag="PA2521" /db_xref="GeneID:880333" CDS complement(2840512..2841966) /gene="czcB" /locus_tag="PA2521" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) divalent metal cation efflux membrane fusion protein CzcB" /protein_id="NP_251211.1" /db_xref="GeneID:880333" /translation="MGKKTIIAVTALALLGLGGGAYLELGGKAPAGAGEAAAEGEGSG PRGGMLLRQGDLTLELLVPEDGSPLKAWVERGGKALAPQEVVLGADVERATGEVEDLL FKASGDGLVANAGIAEPHAFTARLKLMAGKQGYDFAFTREEGKLELDAEQIEAAGITL DTARTISLAQVVSLPGEIRFNEDRTAHIVPRLPGIVDSVPANLGQAVKQGELLAVISS PQLSDQRSEFAAAQRRLSLAQSTYKREQQLWKEGISAEQEFLLARQGLQEAEIALNNA RAKIAALGGNPSLQGGNRYELRAPFAGVLVEKHLTQGEPVDGTANVFTLSDLSSVWAT FNVPAQLLGQVRVGSKVKVLAQALDSEVEGTVSYIGDLLGEQTRAATARVTLSNPEST WRPGLFVSVQVAEATRKEVLTVADGAVQNVDGEDVVFVRVADGFVVQPVKLGISDGQR VEVLEGLRAGSQVAASGSFILKSELGKGSAEHGH" misc_feature complement(2840545..2841468) /gene="czcB" /locus_tag="PA2521" /note="Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms]; Region: AcrA; COG0845" /db_xref="CDD:440606" gene complement(2842019..2843305) /gene="czcC" /locus_tag="PA2522" /db_xref="GeneID:882894" CDS complement(2842019..2843305) /gene="czcC" /locus_tag="PA2522" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="outer membrane protein CzcC" /protein_id="NP_251212.1" /db_xref="GeneID:882894" /translation="MPILRPLASAGKRACWLLMGLCLGLPALANEAPVSFNGTSISLE QALERALRSNPELAAVGRETEIASGARQQAGLIPNPDLSWSVEDTRQGNRQTSVSIAQ PLELGGKRGARVEVAKRGSEIAWTQLEVRRAELRAQVRGAYYAALTAQERVRLAKTSL DLARRALQAADRRVKAGSISSVERVRAQVLADNAQLDLSQAELEQQRTYVQLSSTWDE PQPGFARVGGALDAVPASITRGALLRHLDESPTLRLAAQEVARGEAQVDLEKRQRIPN LTVSIGSKYDQTARDGRGERVNLIGLSMPLPLFDRNQGNIYAAQSRADQARDLQRATL LRLRSEAVQAYDQLRTSEQELALVRRDLLPGAQSALDSMTRGFEMGKFNFLDVLDAQR TLVGVRAQYVRALDAAAQARVSMERLLGEDIGHLGQ" misc_feature complement(2842040..2843182) /gene="czcC" /locus_tag="PA2522" /note="Outer membrane protein TolC [Cell wall/membrane/envelope biogenesis]; Region: TolC; COG1538" /db_xref="CDD:441147" gene 2843818..2844492 /locus_tag="PA2523" /db_xref="GeneID:882895" CDS 2843818..2844492 /locus_tag="PA2523" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_251213.1" /db_xref="GeneID:882895" /translation="MRILIIEDEVKTADYLHQGLTESGYIVDRANDGIDGLHMALQHP YELVILDVNLPGIDGWDLLRRLRERSSARVMMLTGHGRLTDKVRGLDLGADDFMVKPF QFPELLARVRSLLRRHDQAPMQDVLRVADLELDASRHRAFRGRVRINLTTKEFALLHL LMRRNGDVITRTQIISLIWDMNFDNDSNVVEVAICRLRAKIDDGFDLKLIHTIRGVGY VLEARR" misc_feature 2843824..2844477 /locus_tag="PA2523" /note="heavy metal response regulator; Region: cztR_silR_copR; TIGR01387" /db_xref="CDD:130454" gene 2844489..2845907 /locus_tag="PA2524" /db_xref="GeneID:878718" CDS 2844489..2845907 /locus_tag="PA2524" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_251214.1" /db_xref="GeneID:878718" /translation="MTPPGRLSLRLALLVGALGALLALALGAMAHWNLGRELEARERE NLQLKLEQIRHSLEDDLDLRSDPAVQAHALQDQLVAHSGLHLSILDSRSGQPLMSFGD QAAASVAANRALLARLQADARQPVFQSWSTGNDQRLLSIGASMRMKNGTPVQVLLSSE RNADERLLDGFLRATLLALPFLLPLIALAAWWVVRAGLEPLNRFRRVAAQVSPQDLSY RIPEQNLPRELDSLARSFNHMLGRLEDGVRQLSQFSDDLAHELRAPICNLLVRNQVLL SQHRDGAAYREALESNAEELERLSRIVTDMLFLVQVDNPAIQAQFGCVALHEQAAKVI DLYEMVAEDKGVELRLSGNGFAHGDNLMIQRAISNLVSNAVRHTPQGGRIDVRIGERA GHTEVRVSNDGPGIPPEYLPHLFERFYRRAGRQTGAQAGTGLGLAIVQSIMAYHGGRA EAESVPQQKTHLRLLFPSTGAA" misc_feature 2844498..2845889 /locus_tag="PA2524" /note="heavy metal sensor kinase; Region: cztS_silS_copS; TIGR01386" /db_xref="CDD:273593" gene complement(2846283..2847779) /locus_tag="PA2525" /db_xref="GeneID:878719" CDS complement(2846283..2847779) /locus_tag="PA2525" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251215.1" /db_xref="GeneID:878719" /translation="MKHTPSLLALALVAALGGCAIGPDYQRPDLAVPAEFKEAEGWRR AEPRDVFQRGAWWELYGDQTLNDLQMHLERSNQTLAQSVAQFRQAEALVRGARAAFFP SITGNVGKTRSGQGGGDSTVLLPGGSTVSSGGSGAISTSYSTNLSVSWEVDLWGKLRR QLEANQASLHASAADLAAVRLSQQSQLAQNYLQLRVMDEQIRLLNDTVTAYERSLKVA ENKYRAGIVTRADVAQARTQLKSTQAQAIDLKYQRAQLEHAIAVLVGLPPAQFNLPPV ASVPKLPDLPAVVPSQLLERRPDIASAERKVISANAQIGVAKAAYFPDLTLSAAGGYR SGSLSNWISTPNRFWSIGPQFAMTLFDGGLIGSQVDQAEATYDQTVATYRQTVLDGFR EVEDYLVQLSVLDEESGVQREALESAREALRLAENQYKAGTVDYTDVVTNQATALSNE RTVLTLLGSRLTASVQLIAAMGGGWDSADIERTDERLGRVEEGLPPSP" misc_feature complement(2846358..2847728) /locus_tag="PA2525" /note="efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; Region: outer_NodT; TIGR01845" /db_xref="CDD:273830" gene complement(2847776..2850886) /locus_tag="PA2526" /db_xref="GeneID:882888" CDS complement(2847776..2850886) /locus_tag="PA2526" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux transporter" /protein_id="NP_251216.1" /db_xref="GeneID:882888" /translation="MSLSTPFIRRPVATTLLTLALLLAGTLSFGLLPVAPLPNVDFPA IVVSASLPGASPETMASSVATPLERSLGRIAGISEMTSSSSLGSTTVVLVFDLEKDID GAAREVQAAINGAMSLLPSGMPNNPSYRKANPSDMPIMVLTLTSETQSRGEMYDLAST VLAPKLSQVQGVGQVSIGGSSLPAVRVDLNPDAMSQYGLSLDSVRTAIAAANSNGPKG AVEKDDKHWQVDANDQLRKAREYEPLVIHYNADNGAAVRLGDVAKVSDSVEDVRNAGF SDDLPAVLLIVTRQPGANIIEATDAIHAQLPVLQELLGPQVKLNVMDDRSPSIRASLE EAELTLLISVALVILVVFLFLRNGRATLIPSLAVPVSLIGTFAVMYLCDFSLNNLSLM ALIIATGFVVDDAIVVVENIARRIEEGDPPIQAAITGARQVGFTVLSMTLSLVAVFIP LLLMGGLTGRLFREFAVTLSAAILVSLVVSLTLTPMLCARLLRPLKRPEGASLARRSD RFFAAFMLRYRASLGWALEHSRLMVVIMLACIAMNLWLFVVVPKGFLPQQDSGRLRGY AVADQSISFQSLSAKMGEYRKILSSDPAVENVVGFIGGGRWQSSNTGSFFVTLKPIGE RDPVEKVLTRLRERIAKVPGAALYLNAGQDVRLGGRDSNAQYEFTLRSDDLTLLREWA PKVEAAMRKLPQLVDVNSDSQDKGVQTRLVIDRDRAATLGINVEMVDAVLNDSFGQRQ VSTIFNPLNQYRVVMEVDQQYQQSPEILRQVQVIGNDGQRVPLSAFSHYEPSRAPLEV NHQGQFAATTLSFNLAPGAQIGPTREAIMQALEPLHIPVDVQTSFEGNAGAVQDTQNQ MPWLILLALLAVYIVLGILYESYVHPLTILSTLPSAGVGALLALILCRSELSLIALIG IILLIGIVKKNAIMMIDFALEAERNHGLSPREAILEACMMRFRPIMMTTLAALLGALP LIFGIGGDAALRRPLGITIVGGLIGSQLLTLYTTPVVYLYLDRLRHWVNQKRGVRTDG ALETPL" misc_feature complement(2847842..2850877) /locus_tag="PA2526" /note="multidrug efflux RND transporter permease subunit; Region: RND_permease_2; NF033617" /db_xref="CDD:411236" gene complement(2850883..2854014) /locus_tag="PA2527" /db_xref="GeneID:882889" CDS complement(2850883..2854014) /locus_tag="PA2527" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux transporter" /protein_id="NP_251217.1" /db_xref="GeneID:882889" /translation="MNPSRPFILRPVATTLLMVAILLSGLIAYRFLPISALPEVDYPT IQVVTLYPGASPEIMTSSITAPLENQLGQIPGLNEMSSSSSGGASVITLQFSLQSNLD VAEQEVQAAINAAQSLLPNDLPNQPVFSKVNPADAPILTLAVMSDGMPLPQIQDLVDT RLAQKISQISGVGLVSISGGQRPAVRVRANPTALAAAGLSLEDLRSTVTSNNLNGPKG SFDGPTRASTLDANDQLRSADAYRDLIIAYKNGSPLRIRDVASVEDDAENVRLAAWAN NLPAVVLNIQRQPGANVIEVVDRIKALLPQLQSTLPGNLDVQVLTDRTTTIRASVKDV QFELALAVALVVMVTFLFLRNVYATLIPSFAVPLSLIGTFGVMYLSGFSINNLTLMAL TIATGFVVDDAIVMVENIARYLEQGDSPLEAALKGSKQIGFTIISLTFSLIAVLIPLL FMGDVAGRLFREFAITLAVAILISGFVSLTLTPMLSAKLLRHIDEDQQGRFARAAGRV IDGLIAQYAKALRVVLRHQPLTLLVAIATLALTALLYLAMPKGFFPVQDTGVIQGVAE APQSISFQAMSERQRALAEVVLKDPAVASLSSYIGVDGSNPTLNTGRLLINLKPHSER DVTASEVIQRLQPELDHLPGIKLYMQPVQDLTIEDRVARTQYQFTLQDADPDVLAEWV PKLVARLQELPQLADVASDWQDKGLQAYLNIDRDTASRLGVKLSDIDSVLYNAFGQRL ISTIFTQATQYRVVLEVAPQFQLGPQALEQLYVPSSDGTQVRLSSLAKVEERHTLLAI NHIAQFPSATLSFNLAKGYSLGEAVEAIRGVEASLELPLSMQGSFRGAALAFEASLSN TLLLILASVVTMYIVLGILYESFIHPVTILSTLPSAGVGALLALMLAGQEIGIVAIIG IILLIGIVKKNAIMMIDFALDAERNEGKPPHEAIYQACLLRFRPILMTTMAALLGALP LMLAGGAGAELRQPLGITMVGGLLLSQVLTLFTTPVIYLYFDRLARRWAAWRKQRGLD LNTEAGFDGDAGR" misc_feature complement(2850958..2854008) /locus_tag="PA2527" /note="MdtB/MuxB family multidrug efflux RND transporter permease subunit; Region: PRK10503" /db_xref="CDD:182501" gene complement(2854011..2855291) /locus_tag="PA2528" /db_xref="GeneID:882937" CDS complement(2854011..2855291) /locus_tag="PA2528" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux membrane fusion protein" /protein_id="NP_251218.1" /db_xref="GeneID:882937" /translation="MTPTTGKSKFRTLRPWLITALAFAAVIGLVMWLAAPASAPSSDG RPGRGGKPGAALPKANALTVGVARVEQGDLALHFNALGTVTAFNTVNVKPRVNGELVK VLFQEGQEVKAGDLLAVVDPRTYKAALAQAEGTLMQNQAQLKNAEIDLQRYKGLYAED SIAKQTLDTQEAQVRQLQGTIRTNQGQVDDARLNLTFTEVRAPISGRLGLRQVDIGNL VTSGDTTPLVVITQVKPISVVFSLPQQQIGTVVEQMNGPGKLTVTALDRNQDKVLAEG TLTTLDNQIDTTTGTVKLKARFENADGKLFPNQFVNVRLLAQTLKGVLTIPANAVQRG TNGIYVYVVGADNKVSQRSVAIGTSENERVVVESGLKAGEQVVVEGTDRLRDGMEVRV AEASPQVLEGEPQKPQTGRPSGLQGDSVGSGSAE" misc_feature complement(2854035..2855261) /locus_tag="PA2528" /note="MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit; Region: PRK11556" /db_xref="CDD:183194" gene 2855548..2856981 /locus_tag="PA2529" /db_xref="GeneID:882938" CDS 2855548..2856981 /locus_tag="PA2529" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251219.1" /db_xref="GeneID:882938" /translation="MIDPLKHRFAALRSRAEFHSLRYVQRSGEYLSVRRNVSEPPHFS QDRGAMLCVRLNGVEAYAATNDLSAAGLQAALEQAERQAERIARHALFDVRGLPPASG RSQYRSPNQDAPFPSLAECYELLAEESAKVPRDERLVNWSVFLEVSRQEQLYLNSAGA EQYHEQRFVYPGASVTAYDGHDSQTRSFGGHHAGQQGGAEVIERLGLVGAAPRIADQA LQLLAAPNTPSGRCDLLLMPDQMILQIHESIGHPLELDRILGDERNYAGTSFIKTEDF GRYQYGSSLLNVSFDPEIPEELASYRQDDDGSPARKEYLIREGRLLRPLGGALSQHRS GLEGVANSRASSWNRAPIDRMANLNLEPGDKSFAQLVAGIERGVLMSYNRSWSIDDAR NKFQFGCEWGQLIEDGELKGVVKNPNYRGISAQFWRNLSAVGDAGTFEVLGTPYCGKG EPNQVIRVGHASPACVFSDVDVFGGDT" misc_feature 2855575..2856969 /locus_tag="PA2529" /note="Zn-dependent protease PmbA/TldA or its inactivated homolog [General function prediction only]; Region: TldD; COG0312" /db_xref="CDD:440081" gene 2856981..2858306 /locus_tag="PA2530" /db_xref="GeneID:878749" CDS 2856981..2858306 /locus_tag="PA2530" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251220.1" /db_xref="GeneID:878749" /translation="MHQRQHFEALAEDLRRHLAEGEDFTLWYSAEDSEFIRFNRARVR QAGRVRQASALLRLIRDERQASLDLTLSGAPEEDRQRLAEGLRQLRQSLAWIPADPYL LLDTSAWQRENQDLGAAPDSGALLASLERRARDLDLVGIYAAGPLFRGFANSWGAFGW HAGSSFNFDWSLFHGNGQAVKADYAGQRWDDEAFARRFEQAREQLGHLGKPLRQLRPG DYRAYLAPAALEEVMQMLCWGGFSARALATGESPLQRLQNGDALLSPLLNLAERPATS PSPAFSAEGSPRAEVELVGNGRLSGRLVSSRSAREYGLVANGAGANEAPTALDMAGGS LEQARILEALDTGLYIGNLWYLNYSDMPAARLTGMTRFATFWVENGQIRAPVSTMRFD DSLYSFLGAHLEDLSHERELRLSSNTYGERQTDSMHLPGALTGRFTLTL" misc_feature 2856999..2858300 /locus_tag="PA2530" /note="Zn-dependent protease PmbA/TldA or its inactivated homolog [General function prediction only]; Region: TldD; COG0312" /db_xref="CDD:440081" gene 2858503..2859627 /locus_tag="PA2531" /db_xref="GeneID:878750" CDS 2858503..2859627 /locus_tag="PA2531" /EC_number="2.6.1.9" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_251221.1" /db_xref="GeneID:878750" /translation="MPALSRRSFVTLTALASSSILLSPRAFAGSGATSAAGKPQETFL DFNESPYGPSAKARAAMQRAAALCGRYDYDAQDALVGLFAKQNGIPAECVHAYCGSRQ PLQYAVAAFTGKERGLVIADPSYDSVVGAAQAQGAKVAAVPLDAEAAHDIERMLAAAQ RDAGLIYICNPNNPTGTLTPHERIVRAIERKPERSVVLVDEAYIHFSDAPSVVGLAVQ RQDVLVLRTFSKLYGMAGARLGLAIGHPQLLARLERFGGHNVVPSPTAHAGLESLRDD DLVPRRKQQNAEVRERTIAWLRQQGFRCTASQSNCFMVDMRRPAELVIAELEKQRVHV GRPWASWPNWVRVTVGSEEEMQAFRSAFASVSRRHQVAMR" misc_feature 2858503..2859606 /locus_tag="PA2531" /note="pyridoxal phosphate-dependent aminotransferase; Region: PRK09105" /db_xref="CDD:181651" gene complement(2859777..2860274) /gene="tpx" /locus_tag="PA2532" /db_xref="GeneID:880363" CDS complement(2859777..2860274) /gene="tpx" /locus_tag="PA2532" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-Cys peroxiredoxin" /protein_id="NP_251222.1" /db_xref="GeneID:880363" /translation="MAQVTLKGNPVNVDGQLPQKGAQAPAFSLVGGDLADVTLENFAG KRKVLNIFPSVDTPTCATSVRKFNVEAGKLANTVVLCISADLPFAQKRFCGAEGLENV VNLSTLRGREFLENYGVAIASGPLAGLAARAVVVLDEQNKVLHSELVGEIADEPNYAA ALAAL" misc_feature complement(2859780..2860274) /gene="tpx" /locus_tag="PA2532" /note="thiol peroxidase; Region: tpx; PRK00522" /db_xref="CDD:179055" misc_feature complement(order(2859891..2859896,2859951..2859953, 2859999..2860001,2860017..2860022,2860107..2860109, 2860113..2860115)) /gene="tpx" /locus_tag="PA2532" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:239312" misc_feature complement(order(2859879..2859881,2860095..2860097, 2860104..2860106)) /gene="tpx" /locus_tag="PA2532" /note="catalytic triad [active]" /db_xref="CDD:239312" misc_feature complement(order(2859993..2859995,2860095..2860097)) /gene="tpx" /locus_tag="PA2532" /note="peroxidatic and resolving cysteines [active]" /db_xref="CDD:239312" protein_bind complement(2860361..2860386) /experiment="EMSA [PMID: 22609922]" /experiment="Northern blot [PMID: 22609922]" /note="Transcription factor binding site for NP_252504.; Evidence of regulation for: PA2532" /bound_moiety="IscR" gene complement(2860409..2861758) /locus_tag="PA2533" /db_xref="GeneID:880364" CDS complement(2860409..2861758) /locus_tag="PA2533" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sodium:alanine symporter" /protein_id="NP_251223.1" /db_xref="GeneID:880364" /translation="MESLQKWVVDLNGVVWGPLMLVLILGTGLYLMLGLKFMPLVRLG VGFRLLWQGRSKDDESSGEISPFQALMTCLAATVGTGNIAGVATAIFLGGPGALFWMW CTALVGMATKFSEVVLAVHYREKDERNEHVGGPMYAIKNGLGKRWAWLGAAFALFGGL AGFGIGNMVQVNSMADALEVSFGVPDWVTGVATMLVTGLVILGGIRRIGKVAEALVPF MCVGYIVASVIVLVVHAEAIPGAFQLIFTHAFTPIAATGGFAGAAVMAAIRFGVARGI FSNEAGLGTAGIAQAAGTTHSAVRSGLIGMLGTFIDTLIICSLTGLAIITSGVWTSGA SGAALSSAAFEAAMPGVGHYILSLALVVFAYTTILGWSYYGERCWEYLAGTRAILPFR IVWTLAIPFGAMTQLDFAWLVADTLNALMAIPNLIALLLLSPVVFRLTREYFAKARS" misc_feature complement(2860421..2861758) /locus_tag="PA2533" /note="Na+/alanine symporter [Amino acid transport and metabolism]; Region: AlsT; COG1115" /db_xref="CDD:440732" gene complement(2861914..2862825) /locus_tag="PA2534" /db_xref="GeneID:879890" CDS complement(2861914..2862825) /locus_tag="PA2534" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251224.1" /db_xref="GeneID:879890" /translation="MDRFQAMQAFTRIVELGAFGKAADSLELPRASVTQAIQQLEAHL GVQLLQRTTRQVSLTLDGQAYYERCVRLLADLEEAESCFPRVLNNPRGRLRVDLPGAL GRMRVIPFLPEFCERYPELELQLSSNDRLVDLLREGADCVLRVGELHDSSLVGRHLAD LPQVTCASAAYLERHGHPRQLAELGGHLAVNYQSPSSGRTFDFEFSVDGRLRTLPMRS RVSVNNADAYVAACRAGLGLIQAPHYHVAAGLADGSLRQVLGEWLPPSLALHAVYPSQ RQLSPRVRVFVDWLVELFGRQAAGETQ" misc_feature complement(2862637..2862816) /locus_tag="PA2534" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(2861947..2862552) /locus_tag="PA2534" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold; Region: PBP2_CrgA_like_3; cd08472" /db_xref="CDD:176161" misc_feature complement(order(2862019..2862021,2862100..2862102, 2862151..2862153,2862343..2862345,2862349..2862351, 2862391..2862393,2862508..2862510,2862520..2862522)) /locus_tag="PA2534" /note="putative effector binding pocket [active]" /db_xref="CDD:176161" misc_feature complement(order(2862124..2862126,2862133..2862138, 2862157..2862171,2862262..2862264,2862445..2862465, 2862469..2862471,2862481..2862483,2862490..2862495, 2862499..2862504,2862514..2862519)) /locus_tag="PA2534" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176161" gene 2862944..2863939 /locus_tag="PA2535" /db_xref="GeneID:879891" CDS 2862944..2863939 /locus_tag="PA2535" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_251225.1" /db_xref="GeneID:879891" /translation="MKTRQLGHNGPSVSAIGLGCMGMTDFYTTGGDRQEAIATLHRAV ELGLNFFDTADMYGPHSNEELLGEALRGKREQVFLASKFGIVRDPANPRARGVDGSPA YIRRAIEGSLKRLGTDRLDLYYQHRMDPQVPIEDSVGALADLVKAGKIRHIGLSEASA ETLERAHRVHPISALQSEYSLWTRDPEDTGVLAACRRLGIAFVPYSPLGRGFLTGTLK RPEDFAADDYRRFSPRFQGENFAKNLKLVDKVGELAAAKGVKPSQLALAWVLAQGDDL IPIPGTKQRRYLEENVAATELRLSAAELAELDAIFPAEAVAGSRYSEEGMRLVNL" misc_feature 2862947..2863864 /locus_tag="PA2535" /note="AKR13A and AKR13D families of aldo-keto reductase (AKR); Region: AKR_AKR13A_13D; cd19076" /db_xref="CDD:381302" misc_feature order(2863004..2863006,2863559..2863570,2863577..2863579, 2863727..2863729,2863781..2863795,2863802..2863804, 2863811..2863816) /locus_tag="PA2535" /note="active site" /db_xref="CDD:381302" misc_feature order(2863097..2863099,2863112..2863114,2863187..2863189, 2863319..2863321) /locus_tag="PA2535" /note="catalytic tetrad [active]" /db_xref="CDD:381302" gene complement(2864170..2865105) /locus_tag="PA2536" /db_xref="GeneID:878084" CDS complement(2864170..2865105) /locus_tag="PA2536" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phosphatidate cytidylyltransferase" /protein_id="NP_251226.1" /db_xref="GeneID:878084" /translation="MNEQTWMLFGGIGALLLLASLVGFVLKWRAGPGPNAVIDNLNAR INAWWAMVLVIGFAFWLGQAAVILLFYGVSFYALREFITLTPTRRSDYPALVAAFYFV LPMQYLLIYIDWYSMFSIFIPVYVFLLLPILASLGGDTKHFLERASKVQWGLMLAVFC ISFVPALLTLDIPGFEGRNLLLIAYLVIVVQLSDVMQYICGKLFGKRKIAPNLSPSKT VEGFVGGIALATAIGASLWWITPFNLWQAALIALLINLLGFFGGLVMSAIKRDRGVKD WGHMIEGHGGMLDRLDSVCFAAPIFFHVVRYWWTP" misc_feature complement(2864173..2864985) /locus_tag="PA2536" /note="Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]; Region: YnbB; COG4589" /db_xref="CDD:443646" gene complement(2865107..2865736) /locus_tag="PA2537" /db_xref="GeneID:878085" CDS complement(2865107..2865736) /locus_tag="PA2537" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyltransferase" /protein_id="NP_251227.1" /db_xref="GeneID:878085" /translation="MLESVVAYGIIAGARAITGLRSLWLGTTPIPKQRIYYANHSSHG DFVLLWASLPPEVRRRTRPVAGADYWNKAGLRSYVINKVFNGVLVDRQRSEANANPLE PLDRALDGGDSLIIFPEGTRNLDDEVKLLPFKSGIYHLSLAHPDVELVPVWLANLNRV MPKGRMLPLPLLCTLSFGKPLVATAEEGKEAFLERARMALLDLAPEEEA" misc_feature complement(2865110..2865721) /locus_tag="PA2537" /note="1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]; Region: PlsC; COG0204" /db_xref="CDD:439974" gene complement(2865748..2866200) /locus_tag="PA2538" /db_xref="GeneID:882943" CDS complement(2865748..2866200) /locus_tag="PA2538" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251228.1" /db_xref="GeneID:882943" /translation="MPEQTLALVAALLRRGRELDRLSAALTLLAIGLGLYQAVQGIGW RYFAAAMLAIALLGLWQKYWALRVALDAELFERFSRVGDRLEAQTQDLDRALADLGLA RADAAGRTWNQRSRGALRLLRWQALACGAQFLLALSCLLSIPLFNAQT" gene complement(2866193..2867506) /locus_tag="PA2539" /db_xref="GeneID:882944" CDS complement(2866193..2867506) /locus_tag="PA2539" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251229.1" /db_xref="GeneID:882944" /translation="MLWLLFLGPFFFASYGLANWLTSQRGDVGSLVFDWERGMPLWPW TILPYWSIDLLYGLSLLLPRDKRELDTHCLRLLSAQVLSVTCFLLFPLRFTFERPELG GVFGWLFDVLMGFDKPYNQAPSLHIALLVVLWVCYARYASGAWRWLLHGWFALIGLSV LTTWQHHFIDVPTGALAGWLCVWLWPQAQPAPFARASLSRDRQRRRLAACYGLGALAC AAVAFAVGGAALWLCWPALALALVALNYLLFGAAGFQKGSTGRLSAAARWLLAPYLLA ARINAWLWTRRRPQPDEVLPGLWLGRLPSSAELADGRFRALLDATAELSCEPQGLAYR SLPLLDLVAPDVEDCRRAAVLIDELLAQGPLLVACALGYSRSATLVAAWLLLSGRAAD VESAVAVLRRARPQVLLGEAQRRTLAALSGSVPEPSAELGEVRHA" misc_feature complement(2866949..2867404) /locus_tag="PA2539" /note="PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin; Region: PAP2_Aur1_like; cd03386" /db_xref="CDD:239481" misc_feature complement(order(2866997..2866999,2867009..2867011, 2867027..2867029,2867129..2867137,2867213..2867215, 2867237..2867239)) /locus_tag="PA2539" /note="active site" /db_xref="CDD:239481" misc_feature complement(2866241..2866648) /locus_tag="PA2539" /note="unknown subfamily of bacterial and plant dual specificity protein phosphatases; Region: DSP_bac; cd14527" /db_xref="CDD:350376" gene complement(2867542..2869302) /locus_tag="PA2540" /db_xref="GeneID:880577" CDS complement(2867542..2869302) /locus_tag="PA2540" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251230.1" /db_xref="GeneID:880577" /translation="MRDVQELRFTTHDGVELFYRHWPASRPAPDGTRQAVLLFHRGHE HSGRIAHLVDELDLPEHDFFAWDARGHGLSPGARGDSPSFATSVRDVQTFVDHIQAVH GIAEERMAVVAQSVGAVLVSTWAHDYAPKVRALVLASPAFQVKLYVPFARSGLKLMRL WRGNFFVNSYVKARFLSHDPERIASYDSDPLIAKAISVNVLLGLYEAAERVVADAQAI QIPTQLLISGADFVVHRAPQERFFERLGSLRKEKHILPGFFHDTLGERDRHLAVGRAR RFLLEAFATAPERPSLLDADRLGHTCAEAEALAAPLPKNSPRDLYWRATRAGLRLGSL WSDGVKLGFDTGFDSGSTLDYVYRNQPCGSGPLGRLIDRNYLDSIGWRGIRQRKLHVE ELLRLAMQRLREEQREVRIVDIAAGHGRYILEALQGVEPLPESILLRDYSEINVRDGS ALIESKGLAGIARFVKGDAFDRADLAALQPKPSLGVVSGLYELFADNRMVGDSLAGLG EALEEGGYLVYTGQPWHPQLELIARALTSHRQGQAWVMRRRTQAEMDQLVAAAGFRKI TQRVDQWGIFSVSLAQKVAR" misc_feature complement(2868502..2869206) /locus_tag="PA2540" /note="Serine aminopeptidase, S33; Region: Hydrolase_4; pfam12146" /db_xref="CDD:463473" misc_feature complement(2867554..2868480) /locus_tag="PA2540" /note="Putative methyltransferase; Region: Methyltransf_20; pfam12147" /db_xref="CDD:432362" gene complement(2869392..2870027) /locus_tag="PA2541" /db_xref="GeneID:880578" CDS complement(2869392..2870027) /locus_tag="PA2541" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="CDP-alcohol phosphatidyltransferase" /protein_id="NP_251231.1" /db_xref="GeneID:880578" /translation="MISVYQLKPRFQNLLRPGVQRLYQRGITANQVTLAACLLSLLVG ALVAGFASHLWLFALVPLWMFLRMALNAVDGMLAREFGQKSDLGAYLNELTDVIADSG LYLPFALLPGVNPLWVVLVVLLAVISEYAGALGTMVGASRRYDGPMGKSDRALCFGVI GAGVASGLLPLAWIDWLMLLIAALLLLTIGNRVRQGLAELAASRRGSDGQA" misc_feature complement(2869413..2869943) /locus_tag="PA2541" /note="Phosphatidylglycerophosphate synthase [Lipid transport and metabolism]; Region: PgsA; COG0558" /db_xref="CDD:440324" gene complement(2870162..2873827) /locus_tag="PA2542" /db_xref="GeneID:879814" CDS complement(2870162..2873827) /locus_tag="PA2542" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251232.1" /db_xref="GeneID:879814" /translation="MKALKITLLAIVGLLLALLLGLAALLGTQTGSAWLLGRVPGLQV SGFEGRLGGAWQAQRLSWAQDGTQLVVERPELRWSPACLAGLRLCLQRVAAERVALDL PPSGDSADSGPISLPTLKLPLSIELGEVAVGSFLLDGNQQVAELKLAAHWLADGLHID SLTARGFGLDLALQGRLQPSGDWPLQAEATLGLPAPEGKPWKLAVQVGGELQQALTLK GRSSGYLDGSLEGQLQALAENLPARLLIRADGFKGAAGLPDTLTLNAIQLDASGDLKS GYLIRGGASLPGEGGAVALSLDGRVDAQGADIRQLRLDAGGEQRLELVGRLDWRESLA ADATLDWKDFPWLRLYPLAEPPPVTLKTFKAEVHYQDQRYLGNFSAAASGPAGDFTLA SPVSGDLVQLNLPSLQLRAGQGQAEGRVTLRFDNGVAWDTALQLSELNPAYWVAELPG SLAGPLRSQGSVRDERLALGVDLDVKGRLRGQPALFQARAEGEGQRWTLGNLDLRLGD NKVQGSGALDQRLQGRLDIALNRLGQLWPQLFGRLDGRLDLAGSLAAPQGRLNLKGQQ IAYAEQRIAGLDLQANLDARQNGTLALVASGLRSGETDLGLFKANARGDQRRQQLELD LQGALLKLGLAFDGQLERGNWRGRLARGELSSGGQDWKLQQPARLERLADGRVNFGAH CWVSGAASLCGGEQRLLPEPRLRYTLRDFPLDSLKQWFPEDFAWQGKLNGDLQLDVPA RGPSGVVSLDAGSGTLRLRDQGQWVDVGYDSLRLESRLAPNRVDTSLDFRGPKLGELR VQAQIDPRPASKPLSGEFSLAGLDLSLARPFVPMVEKLQGRLNGSGRLSGGLLAPRVD GRVTLSDGNIGGGELPTSFENLSLDARIAGESLELGGGWRSGRYGQGSLSGNLSWGDA LNVALNIRGNRLPVVVDPYAQLEVEPDLKIGMAGQELAISGKVLVPRGDITIRQLPPS TVKVSDDAVIVGSEQPAQRPLKMKMDIDVEVGQDKLAFSGFGLSAELAGHLHIGDNLD TRGELNLNKGRYRAYGQRLTIRRARLFFAGPIDQPYLDIEAIRRVDDVVAGLRLTGSA EQPTSAVFSEPAMSQEQALSYLVLGRPMSTGEDSNMLGEAALALGLAGSAPLTGEIAK QLGIQDFQLDTEGTGNSTSVVASGNITDKLSLRYGVGVFEPANTIALRYQLTKRLYLE AASGLASSLDLFFKRDF" misc_feature complement(2872133..>2873497) /locus_tag="PA2542" /note="Uncharacterized conserved protein YhdP, contains DUF3971 and AsmA2 domains [Function unknown]; Region: YhdR; COG3164" /db_xref="CDD:442397" misc_feature complement(2870165..2872462) /locus_tag="PA2542" /note="Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport]; Region: TamB; COG2911" /db_xref="CDD:442155" gene complement(2873824..2875563) /locus_tag="PA2543" /db_xref="GeneID:879815" CDS complement(2873824..2875563) /locus_tag="PA2543" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251233.1" /db_xref="GeneID:879815" /translation="MRLTQGLFRFPLAGLLCLSTAAFAESQLSVRVTPANAALKANIE AYVGSLGERDEAALQRFRRNAEAQAEKAAQALGYFQAQIDSEVKDGKPPKLTLKVVPG EPVRLRQVNIQVLGEAASLESFRLPSGKQLKPGAKLNQGVYEDAKRLIQNQASRYGFF QGRFSTQRLSIDPRAGIADIDLVYDSGQRYTFGKVSFDGDSIIEEELLRRMVPFKAGQ PYDSELIAELNQNLQSSGYFEGVRVDAAPTQAQADGARQAIPVAVRLEARKPRTMGVG LGFSTDVGARARFNWTRHWVNAEGHSLGFESEISAPRQNVGAWYEIPLDPPLTDKLRF TSGYQFEDLVDTESKLLTLGGEWHSKRPDGWQRVVSLNWMREEYKLGDDSGLSSFLMP GIGYSLLETDNKVDPSHGYRLQFNVKGAKEGLLADADVLHVDAMAKGLTSFAGGHRLL GRLQVGGIATNDYKSIPPSLRFFAGGDQSVRGYDYRTLSPENSDGDKIGGRYMIAGSV EYQYPLAERWRLATFVDQGNAFNSLDFPSIKTGVGFGVRWVSPVGPLRLDLAHALDDD GGFRLHFSMGPEL" misc_feature complement(2873827..2875530) /locus_tag="PA2543" /note="Outer membrane translocation and assembly module TamA [Cell wall/membrane/envelope biogenesis]; Region: TamA; COG0729" /db_xref="CDD:440493" gene complement(2875697..2876410) /locus_tag="PA2544" /db_xref="GeneID:878893" CDS complement(2875697..2876410) /locus_tag="PA2544" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251234.1" /db_xref="GeneID:878893" /translation="MARPSARPIAVAKRACRCAGGRQGMRSMPDQVTDVRLLDDGYSR EVRSLFYHAYRHEPTFAYLMDAQRAGYDQRVRACVREMVERHLGEELPAIGLFIDDRL VAAALITPPQRRLDITESWSWRLRMLFSVGLAATRRYLDYHRAVQACLPVGPHHQLPM LGVHPEYQGRQIGEQLLAAVQRWCAEDSASQGLVLDTGNARYLDFYQRHGYREIGEVT LGAVREHVLLHPGETPAAT" misc_feature complement(2875757..>2875954) /locus_tag="PA2544" /note="N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2) [Transcription, General function prediction only]; Region: PhnO; COG0454" /db_xref="CDD:440222" gene 2876555..2877367 /gene="xthA" /locus_tag="PA2545" /db_xref="GeneID:878894" CDS 2876555..2877367 /gene="xthA" /locus_tag="PA2545" /EC_number="3.1.11.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="exonuclease III" /protein_id="NP_251235.1" /db_xref="GeneID:878894" /translation="MKIVSFNINGLRARPHQLAALIERHQPDVIGLQETKVADDQFPQ AEIEALGYHVHYHGQKGHYGVALLSRQAPLELHRGFPSDGEESQRRFIWGTFSDAQGN PITVMNGYFPQGENREHPTKFPAKQRFYADLQSLLENSFKPEQALVVMGDINISPEDC DIGIGEENRKRWLKTGKCSFLPEEREWLATLKNWGLVDSFRALNPEVNDRFSWFDYRS RGFEDNPKRGLRIDVILASRVLQSRFKDAGIDYDLRGMEKPSDHAPIWLELA" misc_feature 2876555..2877361 /gene="xthA" /locus_tag="PA2545" /note="exonuclease III; Provisional; Region: PRK11756" /db_xref="CDD:236970" misc_feature order(2876573..2876575,2876654..2876656,2876882..2876884, 2876891..2876893,2877008..2877010,2877014..2877016, 2877338..2877340) /gene="xthA" /locus_tag="PA2545" /note="putative phosphate binding site [ion binding]; other site" /db_xref="CDD:197320" misc_feature order(2876573..2876575,2876654..2876656,2876882..2876884, 2877008..2877010,2877014..2877016,2877248..2877250, 2877335..2877340) /gene="xthA" /locus_tag="PA2545" /note="putative catalytic site [active]" /db_xref="CDD:197320" misc_feature order(2876579..2876584,2876588..2876596,2876654..2876656, 2876732..2876737,2876882..2876884,2876891..2876893, 2876897..2876899,2876918..2876920,2877008..2877010, 2877014..2877016,2877191..2877193,2877200..2877205, 2877239..2877241,2877245..2877250,2877326..2877331, 2877338..2877340) /gene="xthA" /locus_tag="PA2545" /note="active site" /db_xref="CDD:197320" misc_feature order(2876579..2876581,2876654..2876656,2877335..2877340) /gene="xthA" /locus_tag="PA2545" /note="metal binding site A [ion binding]; metal-binding site" /db_xref="CDD:197320" misc_feature order(2876579..2876584,2876588..2876596,2876732..2876737, 2876882..2876884,2876891..2876893,2876897..2876899, 2876918..2876920,2877200..2877205,2877326..2877331) /gene="xthA" /locus_tag="PA2545" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:197320" misc_feature order(2876882..2876884,2876891..2876893,2877008..2877010, 2877014..2877016,2877191..2877193,2877239..2877241, 2877245..2877247,2877338..2877340) /gene="xthA" /locus_tag="PA2545" /note="putative AP binding site [nucleotide binding]; other site" /db_xref="CDD:197320" misc_feature order(2876882..2876884,2877008..2877010,2877014..2877016, 2877338..2877340) /gene="xthA" /locus_tag="PA2545" /note="putative metal binding site B [ion binding]; other site" /db_xref="CDD:197320" gene complement(2877477..2877908) /locus_tag="PA2546" /db_xref="GeneID:882898" CDS complement(2877477..2877908) /locus_tag="PA2546" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ring-cleaving dioxygenase" /protein_id="NP_251236.1" /db_xref="GeneID:882898" /translation="MTMQPFVVERLDHIVLRVRDLERSIAFYRDVLGCVVVKWRDDLE LAHLRLGTSMLDLVAVSGALGREGGAAPGGEGRNVDHFCVRIEPFDEAALVAHLEGFG LVPQVPAEIRFGAEGDGWSLYFFDPDGNRVELKGPRVDSPA" misc_feature complement(2877498..2877887) /locus_tag="PA2546" /note="vicinal oxygen chelate (VOC) family; Region: VOC; cl14632" /db_xref="CDD:472697" gene 2877999..2878916 /locus_tag="PA2547" /db_xref="GeneID:882899" CDS 2877999..2878916 /locus_tag="PA2547" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251237.1" /db_xref="GeneID:882899" /translation="MNYPVDHLTALKVFRAVAANGGFAAAARQMNLSPAAVSKNVAEL EAHLKVRLINRTTRSMSLTEAGEVYRQRLERILDDLEAADAALTSMQQGPSGLLRVSA PLTLALTCLTPAIPAFLQRYPELRLELLLQDGRQDLIAEGIDLALRGSDRVADSGLVA RPLLVLEHVLCAAPAYLSQHGQPLRPEALREHECIRFSLSGHADRWTFRKDRECIAVP IAGRYRVSSSLAVRDALLAGFGLSLIPRLYVQAELAEGRLVELLADWKADETAIHAVY PSRQLAGKTRVFLDFLTETMAQGHDSPTL" misc_feature 2878092..>2878451 /locus_tag="PA2547" /note="LysR transcriptional regulator; Provisional; Region: rbcR; CHL00180" /db_xref="CDD:177082" misc_feature 2878284..2878874 /locus_tag="PA2547" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(2878314..2878316,2878326..2878328,2878443..2878445, 2878488..2878490,2878494..2878496,2878680..2878682, 2878731..2878733,2878812..2878814) /locus_tag="PA2547" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature order(2878317..2878322,2878332..2878337,2878341..2878346, 2878353..2878355,2878365..2878367,2878371..2878391, 2878575..2878577,2878662..2878676,2878695..2878700, 2878707..2878709) /locus_tag="PA2547" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 2878976..2880370 /locus_tag="PA2548" /db_xref="GeneID:880491" CDS 2878976..2880370 /locus_tag="PA2548" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251238.1" /db_xref="GeneID:880491" /translation="MPAMPHRQRASDKDLWSRTLSLVFLGFLCYAFPWSVFAAPLPIP TDDTPALRIQGSNTIGAKLLPALVEGLMEEEGLEDIRRTPGERENELHLLGKSRDGRL VRVELSAHGSSTGFTALLERHAELAAASRPVKDSEVRALAGFGDLRSPYAEQVIAIDG LAIILHPDNPLASLDTAQMAAVFAGEVHTWEELGGKGGAIRLYARDEQSGTYDTFKEL VLASHGKSLASDARRFESNDRLAAAVSADPHAIGFVGIASVGRARALAIADGESLPMA PQESLIATEDYPLSRRLFLYLKPGEKNPWAQALVRFAQGPRGQAIVTRSGFVAQKIQA VQIAPRPQMPAEYRKLAEQARRLTVNFRFQEGSALLDNKALLDVQRLLDYLRQNRKLQ ERTVLVGFGDPKSDAERSVLLSRLRAMAVRRELARGGVSFREIAGFGDELPVASNDQE LGRQKNRRVEVWVY" misc_feature 2879126..2879953 /locus_tag="PA2548" /note="Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily; Region: PBP2_phosphate_like_1; cd13653" /db_xref="CDD:270371" misc_feature order(2879141..2879149,2879306..2879311,2879363..2879365, 2879603..2879605) /locus_tag="PA2548" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270371" misc_feature 2880047..2880364 /locus_tag="PA2548" /note="Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; Region: OmpA_C-like; cd07185" /db_xref="CDD:143586" misc_feature order(2880068..2880073,2880176..2880181,2880188..2880190, 2880200..2880205,2880212..2880214,2880332..2880334, 2880344..2880346) /locus_tag="PA2548" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene 2880520..2881563 /locus_tag="PA2549" /db_xref="GeneID:880492" CDS 2880520..2881563 /locus_tag="PA2549" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251239.1" /db_xref="GeneID:880492" /translation="MAALHAFLTEPFLGTATWFWLAFLAIVIVLLVLDLGVLQRDHHE IGVRESLLLSAGYFACGLAFGGWVWYAFGPTSAVEYYTGFLVEQSLSMDNVFVMAMIF SFFGIPRRYQHQVLFWGILGAIVLRAIMIGLGAALVKEFDWIMYVFGAFLLFSGVKML FNKHEEEPDLEHNPVLRFLRKHMRVTKELHEHHFFVRLPDASGKLVRYATPLFFALVL IELADLVFAVDSVPAIFAITQDPFIVYTSNIFAILGLRALYFSLAAMIHRFVYLKYAL ALVLVFIGAKIMLHGVIGKIPAGLSLGVTFGLLAGGILLSLLKTRTPKATVEDKAEPN AEHALDRTSGHPR" misc_feature 2880568..2881482 /locus_tag="PA2549" /note="integral membrane protein, TerC family; Region: R_switched_Alx; TIGR03718" /db_xref="CDD:274743" gene complement(2881754..2882983) /locus_tag="PA2550" /db_xref="GeneID:882904" CDS complement(2881754..2882983) /locus_tag="PA2550" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_251240.1" /db_xref="GeneID:882904" /translation="MDFAYSPKVQELRERVSAFMEAHVYPAEAVFERQVAEGDRWQPT AIMEELKAKAKAEGLWNLFLPESEYGAGLANHEYAPLAEIMGRSLIGPEPFNCAAPDT GNMEVLVRYGSEEQKRTWLEPLLSGEIRSAFAMTEPGVASSDATNMEARAERQGDDWV INGRKWWTSGACDPRCKILIFMGLTNPDAPRHQQHSMILVPVDTPGVKILRPLPVFGY DDAPHGHAEVLFENVRVPYENVILGEGRGFEIAQGRLGPGRIHHCMRSIGMAERALEL MCKRAVSRTAFGKPLARLGGNIDHIADSRMEINMARLLTLQAAYMMDTVGNKIAQSEI AQIKVVAPNVALKVIDRAIQMHGGAGVSNDFPLAYWYAMQRTLRLADGPDEVHRAAIG KFELGKYVPREMLRSSR" misc_feature complement(2881793..2882965) /locus_tag="PA2550" /note="Acyl-CoA dehydrogenases similar to fadE2; Region: ACAD_FadE2; cd01155" /db_xref="CDD:173844" misc_feature complement(order(2882441..2882443,2882447..2882449, 2882546..2882551,2882570..2882572,2882576..2882578)) /locus_tag="PA2550" /note="FAD binding site [chemical binding]; other site" /db_xref="CDD:173844" misc_feature complement(order(2881841..2881846,2882207..2882209, 2882216..2882221,2882240..2882242,2882477..2882479)) /locus_tag="PA2550" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:173844" misc_feature complement(2881841..2881843) /locus_tag="PA2550" /note="catalytic base [active]" /db_xref="CDD:173844" gene 2883157..2884089 /locus_tag="PA2551" /db_xref="GeneID:882905" CDS 2883157..2884089 /locus_tag="PA2551" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251241.1" /db_xref="GeneID:882905" /translation="MNLNKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALSRL RETFNDPLFVRTAQGMVPTPMAQNIIGPVRNALQLLRVSVQESRSFDPQQANKTYRIS MTDLTEAVILPPLFQRLRRLAPNVHIESFLAKRRETTKELAAGRLDFAVDAPLNTDPQ VRHVKLMEDRYVCAMRRGHPLAGKPKLALDDYLGLTHIHISSRRSGLGYIDLALGKMG IQRKIALRSQHYLMASTVVQQTDMAMTVPERFARHHDLHYAVLPVSDVPKLETHLYWH ESTDQDPANRWMREQIIELCQQVTARENKAAQPA" misc_feature 2883178..2883357 /locus_tag="PA2551" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 2883448..2884041 /locus_tag="PA2551" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold; Region: PBP2_Nitroaromatics_like; cd08417" /db_xref="CDD:176109" misc_feature order(2883466..2883468,2883472..2883477,2883487..2883489, 2883661..2883663,2883775..2883777,2883967..2883969) /locus_tag="PA2551" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176109" misc_feature order(2883469..2883471,2883478..2883483,2883490..2883495, 2883502..2883507,2883511..2883516,2883523..2883528, 2883532..2883546,2883550..2883552,2883742..2883744, 2883826..2883840,2883847..2883852,2883859..2883864, 2883871..2883873) /locus_tag="PA2551" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176109" gene complement(2884206..2885333) /locus_tag="PA2552" /db_xref="GeneID:878531" CDS complement(2884206..2885333) /locus_tag="PA2552" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_251242.1" /db_xref="GeneID:878531" /translation="MIPCEEEIQIRDMARQFAQERLKPFAADWDREHRFPAEAIREMA DLGFLGMLVPEEWGGAQTGHLAYAMALEEIAAGDGACSTIMSVHNSVGCMPIHKFGSA EQKERFLRPLAQGSMLGAFALTEPQAGSDASFLKTRARRDGDHYVLNGAKQFITSGSH AGMVIVFAVTDPDAGKRGISAFIVPTDTPGYEVVRIEDKLGQHASDTCQLAFNDLRIP ATLRLGEEGEGYRIALANLEGGRIGIAAQAVGMARAAFEAARDYAHERETFGKPIIEH QAVAFRLADMATRIAVARQMVHHAASLREAGLPCLTEASMAKLFASEMAEEVCSAAIQ TLGGYGYLKDFPVERIYRDVRVCQIYEGTSDVQRLVIARSL" misc_feature complement(2884209..2885321) /locus_tag="PA2552" /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933" /db_xref="CDD:447864" misc_feature complement(order(2884239..2884241,2884245..2884247, 2884251..2884259,2884866..2884868,2884872..2884874, 2884965..2884967,2884971..2884973,2885061..2885063)) /locus_tag="PA2552" /note="active site" /db_xref="CDD:173847" gene complement(2885362..2886552) /locus_tag="PA2553" /db_xref="GeneID:878532" CDS complement(2885362..2886552) /locus_tag="PA2553" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA thiolase" /protein_id="NP_251243.1" /db_xref="GeneID:878532" /translation="MTREDPIVIVSAVRTPMGGFLGDFKDVNAATLGAAAVRAAVERA RLQADEVDEAVLGCVLAAGQGQAPARQAVLGAGLARGTPCSTLNKMCGSGMKALMLAH DTLLAGSAGVALAGGMESMSNAPYLLERARSGYRMGHGKVLDHMFLDGLEDAYDKGRL MGTFAEDCAEAYGFTREAQDEFAVASLTRAQQAMRDGRFQAEIVPLTVTAGKTERLVD SDEQPPKARLDKIPTLKPAFREGGTVTAANSSSISDGAAALVLMRLSEAERRGLAPLA AIRGHASFADAPNLFPTAPVGAVKRLMQRTGWSLGEVDLFEVNEAFAVVGMAAMRDLD LSHERLNVHGGACALGHPIGASGARIVVTLLNALQQYDLERGVAAVCIGGGEATAIAV ERLR" misc_feature complement(2885374..2886549) /locus_tag="PA2553" /note="acetyl-CoA C-acetyltransferase; Region: PRK06954" /db_xref="CDD:180775" gene complement(2886570..2887337) /locus_tag="PA2554" /db_xref="GeneID:882742" CDS complement(2886570..2887337) /locus_tag="PA2554" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_251244.1" /db_xref="GeneID:882742" /translation="MRIENRVFLVTGGSSGLGAATAKMLVEQGGKVVLADINAEAGAA KAAELGAQARFVRADIASEADGRQAVAAALEAFGGLHGLANCAGVAPAEKVLGRNGIH ALESFRRVIDINLVGSFNMLRLAAEAMSQGQPDEGGERGVIVNTASVAAFDGQIGQAA YSASKSGVVGMTLPIARELARFGIRVMTIAPGIFETPMMAGMPQEVRDSLGASVPFPP RLGRPDEYAALVRQIIENSMLNGEVIRLDGAIRMAAR" misc_feature complement(2886576..2887328) /locus_tag="PA2554" /note="17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs; Region: HSD10-like_SDR_c; cd05371" /db_xref="CDD:187629" misc_feature complement(order(2886741..2886752,2886756..2886767, 2886843..2886845,2886855..2886857,2886894..2886902, 2886999..2887001,2887074..2887082,2887158..2887166, 2887227..2887232,2887287..2887295,2887302..2887304)) /locus_tag="PA2554" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:187629" misc_feature complement(order(2886576..2886587,2886591..2886638, 2886642..2886644,2886651..2886656,2886663..2886665, 2886675..2886683,2886687..2886695,2886756..2886758, 2886783..2886785,2886789..2886800,2886804..2886809, 2886813..2886821,2886825..2886830,2886837..2886842, 2886849..2886854,2886861..2886863,2886867..2886887, 2886921..2886929,2886948..2886950,2886957..2886962, 2886969..2886971,2886978..2886983,2886990..2886995, 2887005..2887007,2887014..2887019,2887026..2887028, 2887032..2887034,2887044..2887046,2887050..2887058)) /locus_tag="PA2554" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:187629" misc_feature complement(order(2886576..2886584,2886804..2886809, 2886813..2886818,2886825..2886830,2886837..2886842, 2886849..2886854,2886861..2886863,2886867..2886887, 2886969..2886971,2886978..2886983,2886990..2886992, 2887005..2887007,2887017..2887019,2887026..2887028, 2887032..2887034,2887050..2887058)) /locus_tag="PA2554" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187629" misc_feature complement(order(2886843..2886845,2886855..2886857, 2886894..2886896,2886996..2886998)) /locus_tag="PA2554" /note="active site" /db_xref="CDD:187629" gene complement(2887357..2889024) /locus_tag="PA2555" /db_xref="GeneID:882743" CDS complement(2887357..2889024) /locus_tag="PA2555" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="AMP-binding protein" /protein_id="NP_251245.1" /db_xref="GeneID:882743" /translation="MRDYATTAAGFDLQRTAAATLSGTLQALNACVECCDRHALPGRI ALFWEGKDGSRASYTFSELKALSGRFANFLQAQGVRPGDCVAGLLPRTPELLVTILGA WRLGAVYQPLFTAFGPKAIEHRVATAGSKVLVTDAANRDKLDELADPPLAVTVGGPKG QGIRRGDFSFWAELERYPAEFEPVPRSGEDPFLMMFTSGTTGLAKPVPVPLKAILAFV GYLREAVDLRPEDAFWNLADPGWAYGLYYAVAGPLAMGHPTTFYEGPFSVESTCRIIR DYGITNLAGSPTAYRLLMAAGAAAETALKGRLRAVSSAGEPLTPEVIRWFADRLGTTI HDHYGQTELGMVLCNHHALAHPVRVGAAGFACPGHRVVVLDDDLNELPPGQPGILALD RRRSPLMWFPGYQGLETAAFVGDYYLSGDTVELNEDGSISFVGRADDVITTSGYRVGP FDVESALIEHPAVMEAAVIGKPDPERTELVKAFVVLCAGHRPTPELADALQRYVRQRL SAHAYPREIEFLEELPKTPSGKIQRFLLRNQEIARQREAAPRAAAAN" misc_feature complement(2887411..2888853) /locus_tag="PA2555" /note="Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS); Region: MACS_like_2; cd05973" /db_xref="CDD:341277" misc_feature complement(order(2887480..2887482,2887486..2887488, 2887492..2887497,2887510..2887512,2887597..2887599, 2887684..2887695,2887699..2887701,2887717..2887719, 2887726..2887728,2887762..2887764,2887939..2887941, 2887990..2887995,2888002..2888019,2888074..2888085, 2888149..2888151,2888161..2888163,2888167..2888169, 2888227..2888229,2888296..2888304,2888680..2888682)) /locus_tag="PA2555" /note="active site" /db_xref="CDD:341277" misc_feature complement(order(2888410..2888415,2888419..2888436, 2888443..2888445)) /locus_tag="PA2555" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341277" misc_feature complement(order(2887492..2887494,2887510..2887512, 2887687..2887695,2888083..2888085,2888149..2888151, 2888158..2888163,2888314..2888316)) /locus_tag="PA2555" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:341277" misc_feature complement(order(2887684..2887686,2887699..2887701, 2887717..2887719,2887726..2887728,2887762..2887764, 2887939..2887941,2888002..2888019,2888074..2888085)) /locus_tag="PA2555" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341277" gene complement(2889202..2890287) /locus_tag="PA2556" /db_xref="GeneID:882748" CDS complement(2889202..2890287) /locus_tag="PA2556" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251246.1" /db_xref="GeneID:882748" /translation="MKNDGETQASTKGTISVRLVGEALVEWRRQGGEQGEVLQAAGID PQLLGKPYARVTSHAYSRLWLDLARRMDDEFFGMDSRRLKSGSFAFMSRCAIHEQTLE PALTGILRFLCLQFDDFQPRLQRRGGLAEIVLDEAPGRYGRALSYFTLWMITHGLACW LVGRRIPILAIDLRCPQPDYIEDYRVMFSDNLRFSRPLSRLLFNADCLALPVRRDKRE LRRFLLGAPANILVRYRDPQSLAARIKAYLRSLRPGRWPDADALAGHFFMAPSTLRRK LSLEGQSYQALKDQVRRDLAIARLDAGAANFAELALELGFADGSAFHKAFKKWTGSTP GQYRTQVAAETASAESSGVLSETLGHR" misc_feature complement(2889652..2890197) /locus_tag="PA2556" /note="Arabinose-binding domain of AraC transcription regulator, N-term; Region: Arabinose_bd; pfam12625" /db_xref="CDD:432679" misc_feature complement(2889256..2890029) /locus_tag="PA2556" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" gene complement(2890356..2892050) /locus_tag="PA2557" /db_xref="GeneID:882749" CDS complement(2890356..2892050) /locus_tag="PA2557" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="AMP-binding protein" /protein_id="NP_251247.1" /db_xref="GeneID:882749" /translation="MNQPSYTSGRQDVALLATTVGDAFDATVARHAEREALVVRHQRL RYSWRQLAERVDAYARAFIALGLRPGERLGIWAPNCAEWCITQFASAKVGAVLVNINP AYRSSELEYALKQSGCSWLICADAFKTSDYHAMLGDLLPELARARPGELASERLPELR GVISLAERAPAGFLHWQGLPGLAAAVGAEELRQRQASLQFDEPINIQYTSGTTGFPKG ATLSHYNILNNGYMVGESLGLGAEDRLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAP SFDAEATLLAVAEERATALYGVPTMFIAELDHPRRREFDLSSLRTGIMAGATCPIEVM RRVIGDMHMAEVQIAYGMTETSPVSLQTGPDDGLELRVTTVGRTQPRLESKIVDQTGR VVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTGDLAVMDDDGYVRIVGRS KDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKLHPGHHADDE QLRAFCKARIAHFKIPRHFKFVDEFPMTVTGKIQKFRMREISIEEIRLLALRQGRD" misc_feature complement(2890383..2892044) /locus_tag="PA2557" /note="AMP-binding domain protein; Validated; Region: PRK08315" /db_xref="CDD:236236" gene 2892271..2892963 /locus_tag="PA2558" /db_xref="GeneID:882533" CDS 2892271..2892963 /locus_tag="PA2558" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_251248.1" /db_xref="GeneID:882533" /translation="MTPEIAIGLVTALGLGALVGLERQWRQRSSGMATHAMVALGAAS FSILPLLLDNEVSVTRMAAQVVSGIGFLGAGVIMRDGLSVRGLSTAASIWSTGAIGVL AGSGFILAACMTTALIVIANLFLPALGRVVDRHTSGEAEQERFYQISVSCEARNEALV RMQLLQRMGDNRLNLQSLESHALKGSGNVEVNAVVFTLHKEDSLVEQMVGELCLAPQV TAASWVMNPAAE" misc_feature 2892280..2892813 /locus_tag="PA2558" /note="Magnesium uptake protein YhiD/SapB, involved in acid resistance [Inorganic ion transport and metabolism]; Region: SapB; COG1285" /db_xref="CDD:440896" gene complement(2893286..2893828) /locus_tag="PA2559" /db_xref="GeneID:882534" CDS complement(2893286..2893828) /locus_tag="PA2559" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251249.1" /db_xref="GeneID:882534" /translation="MRSKASGLALVVVAGLVAGCASSGYQPEVDWPAGWQVITESIPP EASDVEQLGSRQLATKLGPGGEKEASIELLSLKMMEEESVEIDGQFQSVFDVVQSGYR KAGLGSRCTTPIRSNLGGLASLETHCRISQGNEVLLTQIVAMALGQRAMYSLVYTASP ANSVVYRQSYLRTRASLVLR" misc_feature complement(2893292..2893753) /locus_tag="PA2559" /note="Domain of unknown function (DUF4946); Region: DUF4946; pfam16304" /db_xref="CDD:435264" gene 2894147..2894377 /locus_tag="PA2559a" /db_xref="GeneID:17373363" CDS 2894147..2894377 /locus_tag="PA2559a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719755.1" /db_xref="GeneID:17373363" /translation="MAEPQDKYTRRTGRTWADDQATYNRLREEADAARQKLRESGYSG AEYDQLRQAAFDLNRKANQYWEQMLSDLRQED" gene complement(2894452..2894739) /locus_tag="PA2560" /db_xref="GeneID:882738" CDS complement(2894452..2894739) /locus_tag="PA2560" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251250.1" /db_xref="GeneID:882738" /translation="MDVPPTVQDEQAVSRQLHSLSVRNLAHLAAALTQLGFELSRSSD PGTRQAANAFIGQLANINQDIDRQIELLSALDADNVGFRLLDEVQYPDAPE" gene 2894908..2896614 /locus_tag="PA2561" /db_xref="GeneID:882739" CDS 2894908..2896614 /locus_tag="PA2561" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein CtpH" /protein_id="NP_251251.1" /db_xref="GeneID:882739" /translation="MPASPGHRDVLGCLVAACVPVQPGNPSRRSMLQQSLRAQILVLL GGSLAALLLIALACFGSLTGDVRAYRELLGGPVRAAQLIDEANLQFRGQVQEWKNVLL RGRQTEAQTKYWSQFEAQERAVQDILGRLGSVAEGELKDRVERLREEHRRLGTAYRQG RQRFLEAGADPIAGDQAVTGIDRATTAQMQTLRDELHQASDLHSSSISAEARRTMLLG SLVLIGASLAVALLSLWLVNRNLVRPVQRLIEHIAQLSHGDFGERIEIRRKDELGKLA LAANTLRDFLVDIFDRLRRSTRDLDSASGSLNAIASLMAAGTREQFSRTDQVATAMQE MSATAQEVARYAGDAARAADEADDSAQRGEDVMEETIRSIGEMRKEIDHTVEVIRQLE SDSGRIGKVLDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRTLAQRTAES IAEIHQIIDTVQNGAVNAARAIESGQSRSEAGAEQVANAGAMLRQITASVESIRDMNR QIATAAEEQTAVAEEISRNLTEIASIASSNQEQVEQTEAASRDLHGLSAQLGDALQRL RA" misc_feature 2895139..2896608 /locus_tag="PA2561" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene complement(2896741..2897253) /locus_tag="PA2562" /db_xref="GeneID:882732" CDS complement(2896741..2897253) /locus_tag="PA2562" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251252.1" /db_xref="GeneID:882732" /translation="MFNTRSVLALVVSLSLIGGTPAVLADPGNGKGNPHGNQMDGGKG NKGNKGNQGGHDNHGGPGNKGGGAGQKGNGGGNWDSGPRIDVGGVRVILGDNRGYWNP GPALPPGIQKNLARGKPLPPGIAKKLDGRLLGRLPHYDGYEWMQAGTDLLLVAVATGL IYEVLDNVLD" misc_feature complement(2896744..2897235) /locus_tag="PA2562" /note="anti-virulence regulator CigR family protein; Region: T3SS_CigR_fam; NF040487" /db_xref="CDD:468512" gene 2897610..2899097 /locus_tag="PA2563" /db_xref="GeneID:882733" CDS 2897610..2899097 /locus_tag="PA2563" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sulfate transporter" /protein_id="NP_251253.1" /db_xref="GeneID:882733" /translation="MLQTLKQNWFSNLRGDLLAGLVVALALIPEAIAFSIIAGVDPKI GLYASFSMAVVIAFAGGRPGMISAATGAMALLMVNLVKDHGLQYLLAATLLCGVLQIL AGYLRLGSLMRFVSRSVVTGFVNALAILIFMAQLPELTDVGWPVYAMTAAGLAIVYGF PHLPRIGRLLPSPLVCILVLTGISIYLGLDIRTVGDMGQLPDSLPLFLWPDVPLNLDT LLIVLPYSAALAVVGLLESLMTATIVDEMTDTGSDKNRECKGQGLANIATGLLGGMAG CAMIGQSVINVKSGGRSRLSTLVAGVALLLMVVFLSDWVGRIPMAALVAVMIMVSIGT FRWESIRNLKRYPLSTNLVMLVTVGVVLATHNLAFGVVAGVLLASLFFANKIGHYLDI DSERSADGTRRHYQVSGQVFFASSGRFVAAFDLKETLEHVLIDLRHAHLWDVTAVAAL DKVVLGFRQRGVQVDVLGLNAASATLVDRFGAYDKPGAVDILSDH" misc_feature 2897637..2899091 /locus_tag="PA2563" /note="Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism]; Region: SUL1; COG0659" /db_xref="CDD:440424" gene complement(2899107..2899934) /locus_tag="PA2564" /db_xref="GeneID:882722" CDS complement(2899107..2899934) /locus_tag="PA2564" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="trans-aconitate 2-methyltransferase" /protein_id="NP_251254.1" /db_xref="GeneID:882722" /translation="MVHDLLRDRADLEARWNPSAYMQFARLRQRPVVELLDHIEPCCP ERIYDLGCGTGIATELLARRWPLAELYGVDSSVEMLEEAARLPIKASWERANLRHWCA ERPASLLFAAAVLHFLEDHGKLLPRLLGQLTPGGCLAAHMPNWRDASWYRLMLDALDS AGPGGASLGSPALRYRLHRRNVLSLDNYYRLLAPLTAELDIWETEYLQVVDGNDPIFD WIKVSALRPVLGELDEEARRRFLDRYLELLHRHYPRELDGRTLFPFRRVFIVASLGR" misc_feature complement(2899122..2899889) /locus_tag="PA2564" /note="trans-aconitate 2-methyltransferase; Provisional; Region: PRK01683" /db_xref="CDD:234970" gene complement(2899924..2900349) /locus_tag="PA2565" /db_xref="GeneID:882723" CDS complement(2899924..2900349) /locus_tag="PA2565" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251255.1" /db_xref="GeneID:882723" /translation="MDSHQQPYASQAQADTTLFPEQTRESLQALAVKLQPLIEGHRLD NLVDLLSLLSDIVDLLDPAMVDRLAQLFEQVTSVGWSVGNAVRVAKAELLREQPPSLK DLLRLLRDADSRRGLALVLGSLRSLGRQLAAEQEVAHGA" gene complement(2900372..2901559) /locus_tag="PA2566" /db_xref="GeneID:882794" CDS complement(2900372..2901559) /locus_tag="PA2566" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251256.1" /db_xref="GeneID:882794" /translation="MQRIVIVGGGVGGTMLANLLVVRLYPEILGGEVQVLLISDSPDH YYKPAFMYVAFEQFFLEDLKRPQRSLLRPEVMFQLDRVDRFDFPRQELQTRSGRRHGY DYLVIATGCVPAPERIEGLKEAGDHFYQYQPARRLAERLASLESGRVFITVSFPRTPN VPHQCGIAPVETTLMLDDYLRRRGVRERVEIVYTYPTTAQLLRNCLFLQRPTCEILPS LFEQRGIRFQRGFTLARVDPERRIAYSEEGDEQPFDLLMATPPIHAVDAVRECGLPQA AADEGWLPTNHETLQVYGVDRVYTLGDTVDLPVSKAGGACHNQAPVVASNIAAEIRLG KPCAIYDGRVQAVAQMGLNAGMPLWYDYRHDVKPTPPTKLGGLLRQGFNRGLYWAVAR GML" misc_feature complement(2900492..2901475) /locus_tag="PA2566" /note="NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; Region: Ndh; COG1252" /db_xref="CDD:440864" protein_bind 2902162..2902174 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2567" /bound_moiety="AmrZ" gene 2902218..2903981 /locus_tag="PA2567" /db_xref="GeneID:882795" CDS 2902218..2903981 /locus_tag="PA2567" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251257.1" /db_xref="GeneID:882795" /translation="MATPPYPEDEHSRQAYVDQLGLLEEGADEVFEEILAAATSYFQT PIALISILDHQRQWFRASIGLDIRQTPRRDSFCAYAILGKGVFEVADATLDPRFRDNP YVQGEPRIRFYAGAPLATAEGLNLGSLCVIDREPRGPLAERDVAMLEHFARLVMARIH TLRSTNYIDEPTGLYNRLRLQEDVSLRLQRDGALTVIAADLLPLALLNTIIRTLGYPF SNDLMLEARDRIRAELPDFTLYKISPTRFGLLLPRQQQEETESVCLRLLRAFESPVVC RGIPIKANVGLGVLPLADDTLDGDQDWLRLVVSAADDARDRGVGWARYNPPLDQAQQR AFTLLTSLSQAIGTEEGFHLVYQPKIDLPTGRCTGVEALLRWRHPQLGFVSPAEFVPL AEKTALMRPLSDWVLRHAMAQLAQWNARNIPLRLAINVSASDMEDSSFLEEAVRLAKT YDIDLSALELEFTESVLIRDASAVGSVLLRARELGMGIAVDDFGTGYSNWTYLRDLPI TAIKLDQSFTRDLAGSPKAQSVTQAVIGLASQLGYRVVAEGIETHDTFHLLQAWGCHE GQGYLIAQPMLPEQLEDWLRR" misc_feature 2902218..2903978 /locus_tag="PA2567" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" gene complement(2904040..2904447) /locus_tag="PA2568" /db_xref="GeneID:880015" CDS complement(2904040..2904447) /locus_tag="PA2568" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251258.1" /db_xref="GeneID:880015" /translation="MEHPYKTPEADLADERLTAGGFLSGGQPLWKAFWLFFAAGFLLL SVAARQAMVAIVDPLMQEAPGEHAVALTLWGMVGVELVRLAYLCLSLVVVWRCGRNSR WVAARHASRAVLLALILLTLYSIYLVWALLASP" gene complement(2904566..2904907) /locus_tag="PA2569" /db_xref="GeneID:880016" CDS complement(2904566..2904907) /locus_tag="PA2569" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251259.1" /db_xref="GeneID:880016" /translation="MPCRLSLVVFPALFSIAAGAAEELKDMAGSTIVVAGRLEAVECP GAGLYDCTGWPANLYRFEGQDVCLSIEAGCDYSCDGILSEKGGTQSILVSGSYRDHIR KVEGTQVSCPR" gene complement(2905182..2905550) /gene="lecA" /locus_tag="PA2570" /db_xref="GeneID:882335" CDS complement(2905182..2905550) /gene="lecA" /locus_tag="PA2570" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="PA-I galactophilic lectin" /protein_id="NP_251260.1" /db_xref="GeneID:882335" /translation="MAWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWG PQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDV PGTYGNNSGSFSVNIGKDQS" misc_feature complement(2905185..2905547) /gene="lecA" /locus_tag="PA2570" /note="PA-IL-like protein; Region: PA-IL; pfam07828" /db_xref="CDD:369543" gene complement(2905965..2906051) /locus_tag="PA2570.1" /db_xref="GeneID:3240264" tRNA complement(2905965..2906051) /locus_tag="PA2570.1" /product="tRNA-Leu" /db_xref="GeneID:3240264" gene complement(2906166..2907578) /locus_tag="PA2571" /db_xref="GeneID:878108" CDS complement(2906166..2907578) /locus_tag="PA2571" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_251261.1" /db_xref="GeneID:878108" /translation="MHAAAGRAEVRIMETLPIRNRRLLVIDERQADRDRVCGLLQGTL GAESPPVAPERGYQVDTAGSAEEALGRIRSALQADAPYAVVFLGMPSVGADIPVLERF WRLDSRLQVVVHAPPADFPLLAPWAAEERLLLLGLPLQGQEVRQMAGNLSAKWNVTAH LQLQMSRMEAAIQEITREVGQAKEALEKEIGERKELESQLVQTEKLASIGHLAAGVAH EINNPISYVSSNYTTLEEHVRRLLEVLEAYEEARPAIRDEALARRLEQLGERVELAFV KEDVAVLLRESREGIGRVRKIVQDLKNFSRVDAEDDWQWTDLHQGIESTLNIVASELK YRADVVREYGDLPEVKCLPSQINQVVMNLVMNAAQAMGPERGRIVIRTGHTVEHAWIE VEDSGQGISPEILPRIFDPFFTTKPVGKGTGLGLSLSYGIVQKHGGTIEVRSQPGVGS AFRIVLPLESPGNLGGAHGN" misc_feature complement(<2907240..2907512) /locus_tag="PA2571" /note="phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs); Region: REC; cl19078" /db_xref="CDD:473134" misc_feature complement(2906205..>2907119) /locus_tag="PA2571" /note="histidine kinase; Region: T2SS_HK; NF038348" /db_xref="CDD:439642" gene 2907656..2908999 /locus_tag="PA2572" /db_xref="GeneID:878109" CDS 2907656..2908999 /locus_tag="PA2572" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_251262.1" /db_xref="GeneID:878109" /translation="MNDSAPPSNETEIRFSVLLVDDEPLILSSLRRLLRNQPYDLLLA ESGEQALQLLESRPVDLVVSDARMPNMDGAALLAEIHRRSPETIRILLTGHADLPTIA KAINEGRIHHYLSKPWNDDELLLTLRQSLEYLHSERERRRLERLTQEQNDRLQQLNAT LEKRVQARTAELQQTADMLDLAYEELKRSYVVGTEVFSLLVNQRLPKDKQTNQQIIEL VRACCASGLVDESDGRDLAMAAALYNIGKLSWNDTLLSSPSDLLYHHDRDRFRGYPEL SESLLMSLEPMQDAARLIRHHQEHWDGSGYPDHLKGEAIPLGSRLLKLAVDFVELQRG LILERRMNRDEALMYIRKYAGRLYDPELIEPFIQVCATTLADVTLADPQVRAHGTRDL VPGMVLARNLTANNGMLLLNAGKVLNLALIEKLIAFEAIEGARYTLFVRLPESTT" misc_feature 2907698..2908051 /locus_tag="PA2572" /note="phosphoacceptor receiver (REC) domain of hydrogen uptake protein regulator (HupR) and similar domains; Region: REC_HupR-like; cd17569" /db_xref="CDD:381113" misc_feature order(2907947..2907949,2907959..2907961,2907968..2907973, 2907980..2907982,2907986..2907994) /locus_tag="PA2572" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:381113" misc_feature <2908340..2908762 /locus_tag="PA2572" /note="HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant) [Signal transduction mechanisms]; Region: HDGYP; COG2206" /db_xref="CDD:441808" gene complement(2909010..2910617) /locus_tag="PA2573" /db_xref="GeneID:878704" CDS complement(2909010..2910617) /locus_tag="PA2573" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_251263.1" /db_xref="GeneID:878704" /translation="MNIRQRILASGAIGIVAVVLLGGVGFWGQLRLGKALSENELSVN ALRNHMEGDMMHDALRADVLAAFVVQPGDGAAAEQVRQDLQEHSQWFRKVVEQNQGLP LNDAIHQALVELRPDLEAYIGAAESIVGKALLDPVAARAELPQFVQAFKELEGRNEAL SSLIEKHVEQTNRAREDSMRYSAWMLAGGILVACLVLGQLCRQLLRAVLQPLRKLVSS ARVIAQGNLQEPIGVDSNDEAGQLQRALGEMQENLRQMITIIRQESEELHDTSQSIGQ TSQSIVHGASQQADSATSMAASMEEMITNISQISDHADNARVISAKSEELASSGGQVI LNVVEGMSRIADVVNQSSTSITALGQSSDEIHSIIQVIKGIAEQTNLLALNAAIEAAR AGEAGRGFAVVADEVRGLAARTTQSTQEITAMIERIRASTGQAINSMEAGVSRVNEGV SFARQAGVSINEILDGTRHAASVVDEISQTIREQSRASDEIAQRVELIAQRSQQNTQA MHEMAATARRLNEVAATMRSSVERFKI" misc_feature complement(2909013..2910611) /locus_tag="PA2573" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene complement(2910729..2911877) /gene="alkB1" /locus_tag="PA2574" /db_xref="GeneID:878705" CDS complement(2910729..2911877) /gene="alkB1" /locus_tag="PA2574" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alkane-1 monooxygenase" /protein_id="NP_251264.1" /db_xref="GeneID:878705" /translation="MFENFSPSTMLAIKKYAYWLWLLLALSMPFNYWMAQDSAHPAFW AFSLVIAVFGIGPLLDMLFGRDPANPDEETQTPQLLGQGYYVLLTLATVPVLIGTLVW AAGVFVAFQEWGWLGRLGWILSMGTVMGAVGIVVAHELIHKDSALEQAAGGILLAAVC YAGFKVEHVRGHHVHVSTPEDASSARFGQSVYQFLPHAYKYNFLNAWRLEAVRLRKKG LPVFGWQNELIWWYLLSLALLVGFGWAFGWLGMVFFLGQAFVAVTLLEIINYVEHYGL HRRKGEDGRYERTNHTHSWNSNFVFTNLVLFHLQRHSDHHAFAKRPYQVLRHYDDSPQ MPSGYAGMVVLALIPPLWRAVMDPKVRAYYAGEEFQLTAEQSERPAAS" misc_feature complement(2910798..2911748) /gene="alkB1" /locus_tag="PA2574" /note="Alkane hydroxylase is a bacterial, integral-membrane di-iron enzyme that shares a requirement for iron and oxygen for activity similar to that of the non-heme integral-membrane acyl coenzyme A (CoA) desaturases and acyl lipid desaturases. The alk genes...; Region: Alkane-hydroxylase; cd03512" /db_xref="CDD:239589" misc_feature complement(order(2910930..2910935,2910942..2910944, 2911359..2911364,2911374..2911376,2911452..2911454, 2911464..2911466)) /gene="alkB1" /locus_tag="PA2574" /note="Di-iron ligands [ion binding]; other site" /db_xref="CDD:239589" gene 2912225..2912827 /locus_tag="PA2575" /db_xref="GeneID:879686" CDS 2912225..2912827 /locus_tag="PA2575" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251265.1" /db_xref="GeneID:879686" /translation="MSDAFLSSIKNRRTIYALDKQLPVSQEKIVELVKEAVSHSPSAF NSQSSRVVVLFGAEHEQFWNIAKDELKKIVPADAFAATETKLNSFAAGAGTVLFFEDQ TVVRQLQEQFALYADNFPVWSEQASGMAQFAVWTALAEHKVGASLQHYNPLVDAQTHK TWNLPESWKLRAQMPFGAIAAPAGEKAFIAESERFKVFGN" misc_feature 2912234..2912821 /locus_tag="PA2575" /note="Fatty acid repression mutant protein (predicted oxidoreductase) [General function prediction only]; Region: FMR2; COG3560" /db_xref="CDD:442781" gene complement(2912890..2913789) /locus_tag="PA2576" /db_xref="GeneID:879687" CDS complement(2912890..2913789) /locus_tag="PA2576" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251266.1" /db_xref="GeneID:879687" /translation="MNDPIRRGTLEMTSAMLICGTIGWLVLLSGQPVLDVVFWRCVFG FATLLVACAALGFLRRGSLGREAFLLALLSGVFIVGNWVLLFASYSRASIAIGTAVYN VQPFMLVGLGAAFLGEKVTARKLGWLGLSFAGMLAIVNAHGDSGAPRGDYLFGILLAL AAALLYAFAALIVKRLQGTPPHLIALIQVGTGVLMLAPLANLAELPRDVAPWASLATL GIVHTGLMYVLLYGAIQKLPTALTGALSFIYPVAAILVDWLVFEHRLSLAQWLGVAAI LLAAAGMQQGWSVRLPRPAVRRG" misc_feature complement(2912947..2913774) /locus_tag="PA2576" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene 2913922..2914359 /locus_tag="PA2577" /db_xref="GeneID:880008" CDS 2913922..2914359 /locus_tag="PA2577" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251267.1" /db_xref="GeneID:880008" /translation="MTDDIDQRLINALMADSRLSLKALAQVSGLSAPSVAERLRKLEE RGVIRGYTLDVDPRCFGYQFQAIVRIRPLPGRLHEVERQIQDIAEFTECDKVTGDDCF IARLQVRSMEQLDTLLDRINGYAETNTAIVKKSPVKRRLPPMT" misc_feature 2913928..2914317 /locus_tag="PA2577" /note="DNA-binding transcriptional regulator, Lrp family [Transcription]; Region: Lrp; COG1522" /db_xref="CDD:441131" gene 2914374..2914934 /locus_tag="PA2578" /db_xref="GeneID:880009" CDS 2914374..2914934 /locus_tag="PA2578" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_251268.1" /db_xref="GeneID:880009" /translation="MPTPGTGSVPELQLVPFQLGHFPILQRWFATEKELVQWAGPALR HPLSLEQMHEDLAESRRRPPLRLLWSACRDDQVIGHCQLLFDRRNGVVRLARIVLAPS ARGQGLGLPMLEALLAEAFADADIERVELNVYDWNAAARHLYRRAGFREEGLRRSATR VGRERWNVVLMGLLRQEWAAGGAGND" misc_feature 2914401..2914904 /locus_tag="PA2578" /note="Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: RimL; COG1670" /db_xref="CDD:441276" gene complement(2914966..2915832) /gene="kynA" /locus_tag="PA2579" /db_xref="GeneID:879140" CDS complement(2914966..2915832) /gene="kynA" /locus_tag="PA2579" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="tryptophan 2,3-dioxygenase" /protein_id="NP_251269.1" /db_xref="GeneID:879140" /translation="MCPCPHSQAQGETDGEAEWHNAALDFTHAMSYGDYLKLDKVLDA QFPLSPDHNEMLFIIQHQTSELWMKLMLHELRAAREHVKSGKLGPALKMLARVSRIFD QLVHAWAVLATMTPTEYNTIRPYLGQSSGFQSYQYREIEFILGNKNATLLKPHAHRAE LLAALEQALHTPSLYDEAIRLMAAQGLPVSQERLARDAAAGTCYEASVEAAWRQVYQA PERYWDLYQLAEKLIDLEDSFRQWRFRHVTTVERIIGFKPGTGGTEGVGYLRSMLDTI LFPELWRLRSNL" misc_feature complement(2914969..2915784) /gene="kynA" /locus_tag="PA2579" /note="Tryptophan 2,3-dioxygenase (vermilion) [Amino acid transport and metabolism]; Region: TDO2; COG3483" /db_xref="CDD:442706" gene complement(2916158..2916748) /locus_tag="PA2580" /db_xref="GeneID:879141" CDS complement(2916158..2916748) /locus_tag="PA2580" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251270.1" /db_xref="GeneID:879141" /translation="MKNILLLNGGKRFAHSDGRLNQTLHETALAHLDRRGFDLRQTFI DGGYDIPTEVDKFLWADVVIYQMPGWWMGAPWTVKRYIDEVFTAGHGSLYANDGRTRS DSTQKYGSGGLVQGKRYMISATWNAPRQAFDDPSDFFEGKGVDAVYFPFHKANQFLGM SGLPTFLAVDVMKRPDVPATVAAYQAHLDRVFGRAG" misc_feature complement(2916185..2916745) /locus_tag="PA2580" /note="Flavodoxin-like fold; Region: Flavodoxin_2; pfam02525" /db_xref="CDD:426816" gene 2917172..2918212 /locus_tag="PA2581" /db_xref="GeneID:880063" CDS 2917172..2918212 /locus_tag="PA2581" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251271.1" /db_xref="GeneID:880063" /translation="MKTIARRLSPFAILLPASLLSACASLGNAGLGGSQQNPTNQLLN MIDEATREGMSVVLVPALMPNKSVTDLSSYSHRVIFKNKDVPGIAYMQAFANNDLEKI KEAVYLWDFLEVNIVPPGTYLLSGGIDYKIDSTLAQIKAPKGQPAASPLGSVNLSAVL YRRFVKENYWRDASYADKTYTQNVCSAVHMASGQCVGWTEQQYSQREMVSDAGWAEGT KIEDVPSIKLQAQIPDAYAPLSFTIQPGQILLSDRFHLKTPAVSYARKTCKAVDTQNI KCALQDIQVFMRPAPMELTKRFIDREQPRLDETGRQVLARIQPMKTEILGEAGMEDLT WGLPVSLKRKAR" gene complement(2918603..2918676) /locus_tag="PA2581.1" /db_xref="GeneID:3240262" tRNA complement(2918603..2918676) /locus_tag="PA2581.1" /product="tRNA-Cys" /db_xref="GeneID:3240262" gene complement(2918967..2919500) /locus_tag="PA2582" /db_xref="GeneID:880077" CDS complement(2918967..2919500) /locus_tag="PA2582" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251272.1" /db_xref="GeneID:880077" /translation="MGFEQLAELRDRLRAQAAQAKPAQTKSSAGRAKKREAVEPGVEA IWRLQRHFPLAFPKSPAAKVPLKQGILQDAQQHLELLGITAEQLKQAIATWCQGSRYW SCMVEDAPRLDLQGQVAGKVTAEQAVYARRQASRRQREQMREKRAKRAQAGGEAPAAT EAPTPEAPATEASPEAN" misc_feature complement(2919051..2919500) /locus_tag="PA2582" /note="FinO bacterial conjugation repressor domain; the basic protein FinO is part of the the two component FinOP system which is responsible for repressing bacterial conjugation; the FinOP system represses the transfer (tra) operon of the F-plasmid which...; Region: FinO_conjug_rep; cd00236" /db_xref="CDD:238145" misc_feature complement(2919465..2919500) /locus_tag="PA2582" /note="putative kissing complex interaction region [active]" /db_xref="CDD:238145" misc_feature complement(order(2919069..2919071,2919084..2919086, 2919168..2919170,2919240..2919245,2919300..2919302, 2919429..2919431,2919441..2919446,2919465..2919467, 2919474..2919476,2919486..2919488)) /locus_tag="PA2582" /note="putative RNA binding sites [nucleotide binding]; other site" /db_xref="CDD:238145" gene complement(2919591..2922569) /locus_tag="PA2583" /db_xref="GeneID:880078" CDS complement(2919591..2922569) /locus_tag="PA2583" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sensor/response regulator hybrid protein" /protein_id="NP_251273.1" /db_xref="GeneID:880078" /translation="MAASLPMYPQAPGRGCAAFCPAGELCHRRLDMLTRSLLSAVFCL LLIALQPLPVEAESILPDGRTTTTMRPWLDKRARQWLDAREPLTVGVVSPDYPPLSIF YAGSYKGFTADYLALVFERPLRVRDFPSRQAAIDALSQGEIDLLGVGSEVEARQHGLL ASAAYLSDRPVLVSSSGAPFDSQAESWLATVKGYLPAERIKAAYPHSRIIWFDSPQLA LEALSMGDVDGVLGDAVSTHYLIQTHYLLNLRIENFAPIDSQGFRFLLRPGDEPLLAL IDRALPHISGRYGDELLRSWSAGRRLRFDEPRVTLSPAEQRWLSAHPVVPVVINHSLG ALGQLDNEGRLSGIGRDYLDLIGKRSGLRFSFTGARNFVETKSRLDAEEALVTPTMPS SERFDSGLEVLTPYLRSATVLMGARQGGRDERVGRVHGLADLAGKRLATTIGYFLNDF IRREHPEIKLQVYPTFLAAMRSVDAGQSEAAISSDYTGRYLSAQHFDNRIQVVGILDD LSIPISIGVARNQPELQGILEKAQLAIAPEEVAEILHRWEPRFAKGGADFWRDHRSKI LQIGGLFGVLISISLIWGFYLMRQVRKTRQAEEQADTANRAKSVFLSTMSHEIRTPLN AVIGLQELVLKKGEKGVLDLDSLSIAQEAAQGLLLLLGNILDLSRIESGRFDSAPEPV LPGELIRGILPLVGGLTRQKNLSLALELDGDLEQWVLVDPLHFKQVLFNLLGNAIKFT ERGGVTVRAVGRREAERLHLLLEVSDTGLGISEEDQARLFRPFSQVGSPALGQASGSG LGLYISRRLVHLMGGQISLRSELGNGSCFSVEFDLPLTEPPPSESSEARSGVAEVEER KEARALSILLAEDHPFNRLTLTMQLESLGHRVTSTEDGEEAFERWQGEDFDVVITDGM MPRMDGYELARRIRSQEALGGRRRCLVIALTASAEKDALERCLAAGMDRVLFKPTTLD ELARALNGGEPLMPTSVDSQ" misc_feature complement(2919633..2922410) /locus_tag="PA2583" /note="acid-sensing system histidine kinase EvgS; Region: PRK09959" /db_xref="CDD:182169" gene complement(2923222..2923297) /locus_tag="PA2583.1" /db_xref="GeneID:3240266" tRNA complement(2923222..2923297) /locus_tag="PA2583.1" /product="tRNA-Gly" /db_xref="GeneID:3240266" gene complement(2923367..2923927) /gene="pgsA" /locus_tag="PA2584" /db_xref="GeneID:880388" CDS complement(2923367..2923927) /gene="pgsA" /locus_tag="PA2584" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase" /protein_id="NP_251274.1" /db_xref="GeneID:880388" /translation="MNIPNLLTLLRVLLIPIFILLFYLPTSWSYLTASAVFALAAATD WLDGYLARRLGQSTPFGAFLDPVADKLMVAVALVLLVEEHANLWLTLPAVIIIGREIV VSALREWMAELGARAQVAVSNLGKWKTAAQMLALVILLANPPLMTFWVILGYVLLIIS AALTLWSMVHYLLAAWPHLSTTPKEK" misc_feature complement(2923391..2923927) /gene="pgsA" /locus_tag="PA2584" /note="CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Region: PRK10832; cl00453" /db_xref="CDD:469774" gene complement(2923961..2925787) /gene="uvrC" /locus_tag="PA2585" /db_xref="GeneID:880581" CDS complement(2923961..2925787) /gene="uvrC" /locus_tag="PA2585" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit C" /protein_id="NP_251275.1" /db_xref="GeneID:880581" /translation="MSAVFDASAFLATCSNRPGVYRMFDAEAKLLYVGKAKSLKKRLA SYFRKSGLAPKTAALVARIAQVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSY PFVFLSSEDEYPRLSLHRGAKKRKGRYFGPYPSAGAIRESLNLLQKAFLVRQCEDSYF RNRTRPCLQYQIKRCKGPCVGLVSPEEYAEDVRHSVMFLEGRSNALADELNVGMEQAA MRLDFEKAAELRDQVAILRRVQDQQSMEGGNGDVDIVAAIVTPGGACVHLISVRGGRV LGSKNFFPQVAIEEEVGEVLLAFLGQYYLSHQERDLPAELIVNVTHEDFPVLVSAIAE ARGRELEISYRVRGTRARWQQLAVTNAEQALGARLANRQHVAARFEALAEALDLAEPP QRLECFDISHSSGEATVASCVVFGPEGPLKSDYRRYNIEGVTAGDDYAAMHQALTRRF SRLKDGEGKMPDILLVDGGKGQLAMAQEVLQELAVAGLILLGVAKGVTRKPGLETLYL NDASHEFTLPADSPALHLIQQIRDEAHRFAITGHRARRGKARRTSTLEDVPGVGPKRR RDLLKHFGGLQELSRASIDELAKAPGISKKLAEQIYAVLHSE" misc_feature complement(2923964..2925757) /gene="uvrC" /locus_tag="PA2585" /note="excinuclease ABC subunit UvrC; Region: uvrC; PRK00558" /db_xref="CDD:234792" gene complement(2925788..2926432) /gene="gacA" /locus_tag="PA2586" /db_xref="GeneID:880582" CDS complement(2925788..2926432) /gene="gacA" /locus_tag="PA2586" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="response regulator GacA" /protein_id="NP_251276.1" /db_xref="GeneID:880582" /translation="MIKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLAR ELKPDVVLMDVKMPGIGGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYM TKGAGLEEMVQAIRQVFAGQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALM IANCHKVQSISDKLCLSPKTVNTYRYRIFEKLSITSDVELALLAVRHGMVDAAS" misc_feature complement(2925791..2926432) /gene="gacA" /locus_tag="PA2586" /note="response regulator; Provisional; Region: PRK09483" /db_xref="CDD:236538" gene complement(2926773..2927921) /gene="pqsH" /locus_tag="PA2587" /db_xref="GeneID:879540" CDS complement(2926773..2927921) /gene="pqsH" /locus_tag="PA2587" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="2-heptyl-3-hydroxy-4(1H)-quinolone synthase" /protein_id="NP_251277.1" /db_xref="GeneID:879540" /translation="MTVLIQGAGIAGLALAREFTKAGIDWLLVERASEIRPIGTGITL ASNALTALSSTLDLDRLFRRGMPLAGINVYAHDGSMLMSMPSSLGGNSRGGLALQRHE LHAALLEGLDESRIRVGVSIVQILDGLDHERVTLSDGTVHDCSLVVGADGIRSSVRRY VWPEATLRHSGETCWRLVVPHRLEDAELAGEVWGHGKRLGFIQISPREMYVYATLKVR REEPEDEEGFVTPQRLAAHYADFDGIGASIARLIPSATTLVHNDLEELAGASWCRGRV VLIGDAAHAMTPNLGQGAAMALEDAFLLARLWCLAPRAETLILFQQQREARIEFIRKQ SWIVGRLGQWESPWSVWLRNTLVRLVPNASRRRLHQRLFTGVGEMAAQ" misc_feature complement(2926821..2927921) /gene="pqsH" /locus_tag="PA2587" /note="hypothetical protein; Provisional; Region: PRK06753" /db_xref="CDD:168661" protein_bind complement(2928029..2928044) /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA2588, PA2587'" /bound_moiety="LasR" gene 2928539..2929567 /locus_tag="PA2588" /db_xref="GeneID:879541" CDS 2928539..2929567 /locus_tag="PA2588" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251278.1" /db_xref="GeneID:879541" /translation="MSPSENIQYDFEWRPLNNYLAVQRITPPDMRQGSAAEPRLPSEA LYEWIVLNGRSPLEGLSLGEHYRLSDYGVAGLALQSAGTVGEALQLIKTNMLLFRKDI RGIAVRRSSCDTVDVDIDLQDKPDWPQSARLYHANVLASAAYAVFRDLLLGELELVRL RLPERNGDVRAYEEYFRVPVYFAGAGITFTLPEELLEAEIATANSAVFQASLALGSKA FNTRVTREMGGYRQRIVALLEVLQDRYPSIAWVARQLKVTERTLRRRLADEGTNYREV LDLVRHDRARQLLRDERLRIEEVAERLGYMDTSSFRHAFRRWTGQCANDYRQARLAGK TARRQGER" misc_feature <2928713..2929132 /locus_tag="PA2588" /note="Arabinose-binding domain of AraC transcription regulator, N-term; Region: Arabinose_bd; pfam12625" /db_xref="CDD:432679" misc_feature <2928932..2929534 /locus_tag="PA2588" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" misc_feature 2929274..2929519 /locus_tag="PA2588" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene complement(2929583..2930797) /locus_tag="PA2589" /db_xref="GeneID:880600" CDS complement(2929583..2930797) /locus_tag="PA2589" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251279.1" /db_xref="GeneID:880600" /translation="MAQREFSATSGGVLLASVVAIMLGPTGILLNTFSLFIAPMSAEY AWDRAEVSLLVTLFGLAVAITSPLKGWLIDRWGARRTMLGLTAALSLPLLGLAAVNAV WQLYALFLLIGLLAPGNLPYGRILGLWFRQRLGVAYGLLGLGFGVGGPLGLLVGHQSL EAWGWRGAFLVYGVLELGLALPLLAWLFREPAPDAGVAAGTAVAETALSGSTAPQAWR SASFWLVLGNQVLAVFVMSGIMTHGVPMLVERGLSRGEAGTALSALWVGMMLSQPLMG WLLDRVATPRVALPFALAAVLGMAWFLVGDTPSGLWLAVFLVGLGGGGESGTTKYLLM RYFGLRSFGVIYGSIQPFTFALSISLGAYLLGWLYDRAEGYGTAEWVLLAAFSLAACS LFAFRPYPQKLP" misc_feature complement(2929607..2930764) /locus_tag="PA2589" /note="MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; Region: MFS_YcxA_like; cd17355" /db_xref="CDD:340913" misc_feature complement(order(2929724..2929726,2929733..2929738, 2929745..2929750,2929760..2929762,2929808..2929810, 2929820..2929822,2929832..2929837,2929982..2929984, 2929994..2929996,2930084..2930086,2930093..2930101, 2930108..2930113,2930120..2930122,2930351..2930353, 2930360..2930365,2930372..2930374,2930435..2930437, 2930444..2930452,2930456..2930461,2930600..2930602, 2930705..2930707,2930714..2930719,2930726..2930731)) /locus_tag="PA2589" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340913" gene complement(2930808..2933462) /locus_tag="PA2590" /db_xref="GeneID:880601" CDS complement(2930808..2933462) /locus_tag="PA2590" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251280.1" /db_xref="GeneID:880601" /translation="MPDVRLSSRSLTPVLCAVGLACALQGEVQAADGGPRDVATAPRV FDIAPGELAEVLLNIVRQGHVPIAFDQRLVAGLRGPDIRGRLSVEDALRRALAGSGLA YAQDESGAFVLRRGQAPVQETRGAAVAPTLSTVVVTGTRKSDVRAQDSLSPIDVVSAT QLRSSGAVDLRDALVKLLPSLTRQAQPFNASALTHTQSLRGLSPNHVLVLVNGKRRHE TANLNISGGLEKGSTGVDLDTIPINAIERVEVLRDGASAQYGSDAIAGVINVILKSAD SGGSAAADVGQTGDGDGFTHGGGGNIGLAFGDSGFVNLTAEYREQERTMRSGIDERTG RRDNISMGDPAFHRQSLALNSGFGLGDDIEVYGFGTYTRRKASSAANYRLASVAPTLY PDGFTPRPNSDEDDYAFLAGVRGERLLDAWHWDLSSGYGADRPDIGMTQSVNAAIYRE TGNSPRSFDLARYRNSQWTSNLDLGREFELDFLAAPLALSLGAEYRRESYRIDAGDPA SYYSGGAESLAGLSPLSEGQWSRHAWASYLDLGTSLTPAWEVDVAVRHEKFSDFGSTT NGKFATRYQFDPRVALRASVSSGFRAPSLVQEHYTGLSVGPTIALGLLAANSPAAKML GADELQPEKSTSFNLGLVLSPWENVGLNIDAYQISIRDRIVDSATYSGQEAIDALAAA GISLPASASTVSTHYLANGADTRTRGVDITGHYLVALGEYGQVDWELSANFNRTTLRK NHRGANGEPLLNAQQVAWITSSTPRSQVSLGGTWSRQDWEVSLRLTRYGRTSSELDYT VGPDAWSTEKFNHFVNDPKYITDIAARYRLSADLTLTAGADNLFDVRPDKLPAQNTTY GDVLRYDTYASQIGFNGAFYYLRAAYRF" misc_feature complement(2933118..2933270) /locus_tag="PA2590" /note="Secretin and TonB N terminus short domain; Region: STN; smart00965" /db_xref="CDD:198033" misc_feature complement(2930958..2933135) /locus_tag="PA2590" /note="Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism]; Region: FepA; COG4771" /db_xref="CDD:443803" gene complement(2933582..2934388) /locus_tag="PA2591" /db_xref="GeneID:878740" CDS complement(2933582..2934388) /locus_tag="PA2591" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251281.1" /db_xref="GeneID:878740" /translation="MDIALHGGAWHESLGKLLEALDRPFFWRILAQTLGQFAPVDNWA ALIFSDSSPLILSFMEEEREEVEPDPLISRYITGLYLQDPFYQVSRNCRRGGLFHLAD IVSEDFETTEYYNTYFAHYVVTDEVQYNVPLDGERTLCLSLGSESRFGAEQIALFELL RPWVIALMKKRIHFEDAVREEAKPIAAAEVEVQPWRGLISPLTARESDVIRLMLDGYS NKEIADRLTLSIATIKVHRRHIYAKLNVKSHSEIFALLINPPAPRLADAR" misc_feature complement(2933618..2934178) /locus_tag="PA2591" /note="DNA-binding transcriptional regulator, CsgD family [Transcription]; Region: CsgD; COG2771" /db_xref="CDD:442052" misc_feature complement(2933618..>2933785) /locus_tag="PA2591" /note="DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains [Signal transduction mechanisms, Transcription]; Region: CitB; COG2197" /db_xref="CDD:441799" protein_bind complement(2934483..2934502) /experiment="'EMSA [PMID: 17449616, 19682264]'" /experiment="Beta-gal reporter assay [PMID: 17449616]" /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="Site directed mutagenesis [PMID: 17449616]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA2592, PA2591'" /bound_moiety="LasR" gene 2934541..2935644 /locus_tag="PA2592" /db_xref="GeneID:878741" CDS 2934541..2935644 /locus_tag="PA2592" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="spermidine/putrescine-binding protein" /protein_id="NP_251282.1" /db_xref="GeneID:878741" /translation="MKKVCALALSILTTIGATAADSAWAAQTSVHLYNWYDFIAPETP KAFQKETGTRVVLDTFDSAETAQGKLMVGRSGYDVVVITSNILPGLIKAGVLQELDRD RLPHWKNLDADILGKLQANDPGNRYAVPYLWGTTGIAYDVDKVRKLLGPDAPVDSWDL VFKEENISRLSQCGVATLDSSTELVSIALNYLGLPHNSQNPEDYQKAQELLLKVRPYI RYFDSSRVDTDLSNGNVCVVVGWQGTAYMAQVNNEQAGNGRHIAYSIPREGSLVWAEN MVLLKDAPHPQQGYALIDYLLRPEVIARTSNYVGYPNGNQAALPLVERKLRENPAVYL SKETMATLFPLETLPLKVERIRTRVWSRVKTGS" misc_feature 2934628..2935620 /locus_tag="PA2592" /note="The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold; Region: PBP2_PotF; cd13659" /db_xref="CDD:270377" misc_feature order(2934643..2934645,2935261..2935263,2935270..2935272, 2935357..2935359,2935363..2935365,2935471..2935473) /locus_tag="PA2592" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270377" misc_feature order(2934676..2934678,2934685..2934690,2935435..2935440) /locus_tag="PA2592" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:270377" gene 2935851..2936423 /gene="qteE" /locus_tag="PA2593" /db_xref="GeneID:882299" CDS 2935851..2936423 /gene="qteE" /locus_tag="PA2593" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="quorum threshold expression protein QteE" /protein_id="NP_251283.1" /db_xref="GeneID:882299" /translation="MLIHFCPRLLTPAGFDLPCELIDIRIKEFDLHLLGGRDVVARHP LPDKRYHVACRKSGCKAVNGLLVDVEKHVPLFTVDTRWSIDAEVVLRHRVEYVVLDAE HDAVSDYMLLWCDEVPNYFLGQSTPAMQVPLMELMRGNALQTERQDVFRLPTLRSERL RQGNADANQHLPSREQAFHVKAEQISYGLA" misc_feature 2935851..2936396 /gene="qteE" /locus_tag="PA2593" /note="Family of unknown function (DUF6012); Region: DUF6012; pfam19475" /db_xref="CDD:437307" gene complement(2936490..2937449) /locus_tag="PA2594" /db_xref="GeneID:882300" CDS complement(2936490..2937449) /locus_tag="PA2594" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251284.1" /db_xref="GeneID:882300" /translation="MSRPFLRRLAIVFAASVVLSGIGGAQAEEVLRIGFQKSSTLLTL IRSQGTFERELARQGIRVSWHEFPSGLPLLESLNVGNVDLSADVADTVPVFAQAAGAR LTYFARETPSPAAQAILVGEHSPLKSLAELKGRRIAVTKAAGSHYLLIAALASAGLEF SDIQPAYLTPADGRAAFENGKVDAWVTWDPYVASAQRQQRARVLADGQGLASYQRYYL ASSDYARKHPEVLQQVFAELQRTGRWLKSHPADAAKVLGPLWGNLDAATVEQANARRS YDVQPVSADGLDEQQRIADAFHAQGLLPKPVDARAVEVWQPRH" misc_feature complement(2936529..2937362) /locus_tag="PA2594" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" gene complement(2937585..2938541) /locus_tag="PA2595" /db_xref="GeneID:882301" CDS complement(2937585..2938541) /locus_tag="PA2595" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251285.1" /db_xref="GeneID:882301" /translation="MRQTLSLFLLLCLLVGQACADERVTLRLADQKGNMRAQLEAAGA LDDLTYDIRWFEFPAAAPLAEALNAGAVDAGIIGDAPLLFALAAGARLKAIAVDKSDP YGTAVLVRGDSPLRSANDLKGQRIATGRGSIGHFVALKALASVGLGEKDVEFRFLGPV DAKMALANGSVDAWATWEPYTAFAETADKARVLVDGRGLWAGNSFLAATDSALADPAK RAVLQDYLQRLASAQRWAYLHLDEYSRSLAQIIGFPEDAARLQFERRRLRWQALDERT LGQQQETADFYQAHGLIPQRLDVRPTFASGFAVRQASDADIR" misc_feature complement(2937669..2938469) /locus_tag="PA2595" /note="Putative substrate binding domain of sulfonate binding protein, the type 2 periplasmic binding protein fold; Region: PBP2_SsuA_like_2; cd13558" /db_xref="CDD:270276" misc_feature complement(order(2937930..2937932,2938002..2938004, 2938011..2938016,2938140..2938142,2938155..2938157, 2938227..2938229,2938362..2938364,2938446..2938448)) /locus_tag="PA2595" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270276" gene complement(2938553..2939539) /locus_tag="PA2596" /db_xref="GeneID:882302" CDS complement(2938553..2939539) /locus_tag="PA2596" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251286.1" /db_xref="GeneID:882302" /translation="MKRPLCVLAGLLAATLLAGAASAADLISLRLGDVKGDRYAALRA SGELDDLPYKLEMSAFPSGAPVLEALNAGALDIGFTGDIPFLFVYAAGAPLKAVGAWH FNPATVALVVGKDSPIRSVAGLKGKRIAVNRGGWGHFLALGALRRAGLGPQDVSFSFL GPVDGRAALVRGSVDAWVPWEPYTSSAVLLDQARVIDNGAGIMTGYSYALASDAAIAR KKAAISDLLTRLARAQAWALRHPEAFAEALAKDLNMPREVTRRWVGEARISPVVFGPE VAATLQTAADFFHAEGVLPKSLEVAPAFDFSLSAGAAEVARQLPADLRVGQR" misc_feature complement(2938610..2939455) /locus_tag="PA2596" /note="ABC transporter, substrate-binding protein, aliphatic sulfonates family; Region: SsuA_fam; TIGR01728" /db_xref="CDD:130789" gene complement(2939646..2940797) /locus_tag="PA2597" /db_xref="GeneID:882303" CDS complement(2939646..2940797) /locus_tag="PA2597" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251287.1" /db_xref="GeneID:882303" /translation="MAVLQTPSAAFDERLPELTRQLAESADAHDRSGDFPHANLALLR HHGLLALALPPALGGPGASLGELRRVIGAVARGEPSTALVLCMQYLHLRRLADNPDWP GALKRRVAREVLEQGALINSLRVEPELGSPSRGGLPGTLARRVGDGWQLSGHKLYTTG IPGLTWLAVWARSDEPIPRVGTWLVRRDSPGIRIVESWDHLGMRASGSHEVLFEEVAV PLENAIGLHPHDQPPAPDQAVLRDFAQASAVLLGALYDGIAGSAREWLAGWLRERVPA SLGAPLASLPRMQEALGEIDGLLLQNRLLLDAACCGQLPASDSGLLKVAVIDNALAVV EKALELSGNHGLSRHNPLQRHYRDVLCGRVHTPQKDSVWSAAGRAALSL" misc_feature complement(2939709..2940497) /locus_tag="PA2597" /note="Acyl-CoA dehydrogenase; Region: ACAD; cd00567" /db_xref="CDD:173838" gene complement(2940802..2941884) /locus_tag="PA2598" /db_xref="GeneID:882304" CDS complement(2940802..2941884) /locus_tag="PA2598" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251288.1" /db_xref="GeneID:882304" /translation="MSIQFLGMIGHRLASETHAPVGPILDKPYIAAFARAHEEAGFDR ILVGYWSDQPDGFLVAAAAGLATSRIGLLLAHRPGFVAPTLAARKLATLEHLLDGRLA VHIISGGSDADQRKDGDYLDHDQRYARSDEFIELLKRTWTSTEPFDFHGAHYRVEHAF SAIRPQQKPHIPVYFGGSSEAALKVAGKQADVFMLWGEPLAQAAETISAVREQARSNG REVEFSLSFRPILGRTEDEAWAKAEAIRASAGARLGEAGFPKGKPQSVGAQRLLKAVE QGERLDERLWTGIARLVGGGHNSTALVGTAEQVADALLAYYDLGVRNILIRGFDPLAD AVEYGRELIPLTRAKVAERERRRATA" misc_feature complement(2941153..2941836) /locus_tag="PA2598" /note="Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the conversion of alkanesulfonates to the corresponding aldehyde and sulfite. Alkanesulfonate monoxygenase (SsuD) has an absolute requirement for reduced flavin...; Region: Alkanesulfonate_monoxygenase; cd01094" /db_xref="CDD:238527" misc_feature complement(order(2941396..2941401,2941405..2941416, 2941420..2941422,2941537..2941542,2941549..2941551, 2941600..2941602,2941609..2941611,2941618..2941623, 2941630..2941635,2941639..2941641,2941690..2941692, 2941699..2941704,2941711..2941713,2941720..2941737)) /locus_tag="PA2598" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238527" misc_feature complement(order(2941201..2941203,2941207..2941209, 2941303..2941305,2941345..2941350,2941507..2941509, 2941567..2941569,2941726..2941728)) /locus_tag="PA2598" /note="active site" /db_xref="CDD:238527" misc_feature complement(2941657..2941662) /locus_tag="PA2598" /note="non-prolyl cis peptide bond [active]" /db_xref="CDD:238527" misc_feature complement(order(2941153..2941170,2941189..2941200, 2941381..2941422,2941510..2941518,2941537..2941563)) /locus_tag="PA2598" /note="insertion regions; other site" /db_xref="CDD:238527" gene complement(2941894..2942838) /locus_tag="PA2599" /db_xref="GeneID:882305" CDS complement(2941894..2942838) /locus_tag="PA2599" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251289.1" /db_xref="GeneID:882305" /translation="MKLKQYLLTSFATLLLGASLAQAADLPTLRVGDQNYYNVRASME ASGVLEGAPYQVEWKHFQSAAPVAEGLQAGALDLGFLGDSGFIFLAAKGAPVKLVGVS RQNPDTIALLVPKDSPVRSIADLKGRKVAYWPGAWSQQLTLRALEKAGLPKDYVEFVK LMPIDAAAALPRGSIDAFPVWEPYISQQIVVSGARPILTARDLMPGLSSIAANAASIE PRRAQIADFLGRLRKARAWVEAHKEQYADLWAQKANLDRAVSRHWIGQAGMSVGPVDA QAATDYQETADFLLQTGALPKPFDTSTVIDTSFNEAFH" misc_feature complement(2941960..2942757) /locus_tag="PA2599" /note="Putative substrate binding domain of sulfonate binding protein, the type 2 periplasmic binding protein fold; Region: PBP2_SsuA_like_2; cd13558" /db_xref="CDD:270276" misc_feature complement(order(2942215..2942217,2942287..2942289, 2942296..2942301,2942425..2942427,2942440..2942442, 2942512..2942514,2942647..2942649,2942734..2942736)) /locus_tag="PA2599" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270276" gene complement(2942848..2943915) /locus_tag="PA2600" /db_xref="GeneID:882306" CDS complement(2942848..2943915) /locus_tag="PA2600" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251290.1" /db_xref="GeneID:882306" /translation="MITATPSSEVDQPLGEAVDAGFVRRFAQAHEDAGFDRVLVGYFS NAAEGAVVSSFVAAATRRLGVLLAYRPGVIAAPLAARQLATLDQFSEGRLALNVVSGG NDEDLARDGDYLDHDRRYARTDEYLQALRAIWTATGPVDFDGEFYRFQGASPAVRPRQ SPHIPIYFSGSSDAAIEVAARHADTYMLWGEPLAAVDGHIRRVRAAAKAQGRDLRFSV SFRPIVADTEEAAWKRAAEVLEQVRENRARLGLPLRDHQPQNVGSQRLLAAAEQGEVL DSRLWTGVARLTGARWNSTALVGTPEQVAAALGEYYRLGVSTFLIRGFDPLGDAVRYG QGLIPAIHDHIARLPLLRHAG" misc_feature complement(2943205..2943879) /locus_tag="PA2600" /note="Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the conversion of alkanesulfonates to the corresponding aldehyde and sulfite. Alkanesulfonate monoxygenase (SsuD) has an absolute requirement for reduced flavin...; Region: Alkanesulfonate_monoxygenase; cd01094" /db_xref="CDD:238527" misc_feature complement(order(2943448..2943453,2943457..2943468, 2943472..2943474,2943589..2943594,2943601..2943603, 2943652..2943654,2943661..2943663,2943670..2943675, 2943682..2943687,2943691..2943693,2943742..2943744, 2943751..2943756,2943763..2943765,2943772..2943789)) /locus_tag="PA2600" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238527" misc_feature complement(order(2943253..2943255,2943259..2943261, 2943355..2943357,2943397..2943402,2943559..2943561, 2943619..2943621,2943778..2943780)) /locus_tag="PA2600" /note="active site" /db_xref="CDD:238527" misc_feature complement(2943709..2943714) /locus_tag="PA2600" /note="non-prolyl cis peptide bond [active]" /db_xref="CDD:238527" misc_feature complement(order(2943205..2943222,2943241..2943252, 2943433..2943474,2943562..2943570,2943589..2943615)) /locus_tag="PA2600" /note="insertion regions; other site" /db_xref="CDD:238527" gene complement(2944255..2945151) /locus_tag="PA2601" /db_xref="GeneID:882307" CDS complement(2944255..2945151) /locus_tag="PA2601" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251291.1" /db_xref="GeneID:882307" /translation="MKIDDIDAFVAVIRNASLSQAAESLGLTQSAITRRVQSLEESLG VALLDRNTKPLKPTASGLRVYEQCRRVLREVDGLRELVAGDATPSGVLRLGVPQSIGE VVLLDALRRLADEYPELRAQVGTGWGSHLLARLENAELDAAVVLFPPSKVFPEELGAT PLGRMELCVVVARDSAIQARRLLDCYHHGWVLNPDGCGFRAGLQRALADQGLGLQLNL ETFGSELQLGLVAADRGLGLVPAPALARSRYRDQLQVLQLEDFQPLIQLWLVRPRLLG NLETPARLFGRAVAEGLDMQAG" misc_feature complement(2944333..2945151) /locus_tag="PA2601" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 2945264..2945869 /locus_tag="PA2602" /db_xref="GeneID:882308" CDS 2945264..2945869 /locus_tag="PA2602" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251292.1" /db_xref="GeneID:882308" /translation="MSSILRLDRLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQ DDWLPEDCARPDPQRYQQYLLHVDSRQRFSVVSFVWGPGQITPVHDHRVWGLIGMLRG AEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYG ANIGAVRRAVFSAEGEEKPFISGYSNSRLPNIWDLSKENPA" misc_feature 2945264..2945803 /locus_tag="PA2602" /note="Predicted metal-dependent enzyme of the double-stranded beta helix superfamily [General function prediction only]; Region: COG5553" /db_xref="CDD:444296" gene 2945866..2947449 /locus_tag="PA2603" /db_xref="GeneID:882309" CDS 2945866..2947449 /locus_tag="PA2603" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="thiosulfate sulfurtransferase" /protein_id="NP_251293.1" /db_xref="GeneID:882309" /translation="MSQIAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANL PLSRLELEIHARVPRRDTPITVYDDGEGLAPVAAQRLLDLGYSDVALLDGGLSGWRNA GGELFRDVNVPSKAFGELVEAERHTPSLAAEEVQALLDARAEAVILDARRFDEYQTMS IPGGISVPGAELVLRVAELAPDPRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRN GTIGWTLAGQQLEHGQTRRFGAISQDTRKAAAQRARAVADRAGVERLDLAGLAQWQDE HDRTTYLLDVRTPEEYEAGHLPGSRSTPGGQLVQETDHVASVRGARLVLVDDDGVRAN MSASWLAQMGWQVAVLDGLSEADFSERGAWSAPLPRQPRADTIDPTTLADWLGEPGTR VLDFTASANYAKRHIPGAAWVLRSQLKQALERLGTAERYVLTCGSSLLARFAVAEVQA LSGKPVFLLDGGTSAWVAAGLPTEDGESLLASPRIDRYRRPYEGTDNPREAMQGYLDW EFGLVEQLGRDGTHGFFVI" misc_feature 2945941..2946168 /locus_tag="PA2603" /note="Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins...; Region: RHOD; cl00125" /db_xref="CDD:444705" misc_feature 2946067..2946069 /locus_tag="PA2603" /note="active site residue [active]" /db_xref="CDD:238089" misc_feature 2946220..2946546 /locus_tag="PA2603" /note="Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic...; Region: 4RHOD_Repeat_2; cd01533" /db_xref="CDD:238791" misc_feature 2946436..2946438 /locus_tag="PA2603" /note="active site residue [active]" /db_xref="CDD:238791" misc_feature 2946658..2946942 /locus_tag="PA2603" /note="Member of the Rhodanese Homology Domain superfamily, repeat 3. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative...; Region: 4RHOD_Repeat_3; cd01534" /db_xref="CDD:238792" misc_feature 2946844..2946846 /locus_tag="PA2603" /note="active site residue [active]" /db_xref="CDD:238792" misc_feature 2947006..2947437 /locus_tag="PA2603" /note="Member of the Rhodanese Homology Domain superfamily, repeat 4. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative...; Region: 4RHOD_Repeat_4; cd01535" /db_xref="CDD:238793" misc_feature 2947168..2947170 /locus_tag="PA2603" /note="active site residue [active]" /db_xref="CDD:238793" gene complement(2947583..2947672) /locus_tag="PA2603.1" /db_xref="GeneID:3240228" tRNA complement(2947583..2947672) /locus_tag="PA2603.1" /product="tRNA-Ser" /db_xref="GeneID:3240228" gene 2947803..2948471 /locus_tag="PA2604" /db_xref="GeneID:882310" CDS 2947803..2948471 /locus_tag="PA2604" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251294.1" /db_xref="GeneID:882310" /translation="MQEQQYQLNSAVAEQREVSGVLRNTYGLLALTLAFSGLVAYVSQ QMRLPYPNVFVVLIGFYGLFFLTVKLRNSAWGLVSTFALTGFMGYTLGPILNMYLGLP NGGSVITSAFAMTALVFFGLSAYVLTTRKDMSFLSGFITAGFFVLLGAVLVSLFFQIS GLQLAISAGFVLFSSAMILYQTSAIIHGGERNYIMATISLYVSIYNLFISLLQIFGIA GGDD" misc_feature 2947851..2948462 /locus_tag="PA2604" /note="YccA-like proteins; Region: YccA_like; cd10433" /db_xref="CDD:198415" gene 2948582..2948977 /locus_tag="PA2605" /db_xref="GeneID:882311" CDS 2948582..2948977 /locus_tag="PA2605" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="sulfurtransferase TusD" /protein_id="NP_251295.1" /db_xref="GeneID:882311" /translation="MKFAIALFDPPHSPAARRALRFSEAALAGGHEIVRLFFYQDGVH SASANVVSGQDEFDLPAAWRELVERNGLDAVVCIAAALRRGVLNAEEAERYGRPGANL GAPWELSGLGQLHEAAQSADRLVCFGGDR" misc_feature 2948582..2948962 /locus_tag="PA2605" /note="sulfurtransferase complex subunit TusD; Region: PRK00207" /db_xref="CDD:178928" gene 2948974..2949333 /locus_tag="PA2606" /db_xref="GeneID:882312" CDS 2948974..2949333 /locus_tag="PA2606" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="sulfur relay protein TusC" /protein_id="NP_251296.1" /db_xref="GeneID:882312" /translation="MSQSLLIISRQSPWSGPSAREALDIALAGGAFDLPVGMLFLDDG AFQLAPGQHPAHLQQKDLQANLQALPMFGVDDLYVSARSLRERGLAEERLALAVEVLD DQALRDLLQRYDQVITL" misc_feature 2948977..2949330 /locus_tag="PA2606" /note="sulfurtransferase complex subunit TusC; Region: PRK00211" /db_xref="CDD:178930" gene 2949333..2949638 /locus_tag="PA2607" /db_xref="GeneID:882313" CDS 2949333..2949638 /locus_tag="PA2607" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251297.1" /db_xref="GeneID:882313" /translation="MATTLHVLSRSPFNDGRLGSCLYLLNPGDGLLLCGDAVHALLAG SHACQALELMPAEIELFALLEDLQARGIEDVPARLVAVDYPGFVELATRFDKVNSWL" misc_feature 2949348..2949632 /locus_tag="PA2607" /note="sulfur relay protein TusB/DsrH; Region: sulf_tusB_dsrH; TIGR03011" /db_xref="CDD:274388" gene 2949635..2949970 /locus_tag="PA2608" /db_xref="GeneID:882314" CDS 2949635..2949970 /locus_tag="PA2608" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251298.1" /db_xref="GeneID:882314" /translation="MTLLMLEGREIRLDKDGYLAALDDWSEPVAEALAAREELALTAE HWEILQLLREFYAEFQLSPANRPLIKYVAQRLGPDKGNSLHLNHLFKGAPAKLGAKLA GLPKPSNCL" misc_feature 2949644..2949967 /locus_tag="PA2608" /note="sulfur relay protein, TusE/DsrC/DsvC family; Region: dsrC_tusE_dsvC; TIGR03342" /db_xref="CDD:213798" gene 2949967..2950950 /locus_tag="PA2609" /db_xref="GeneID:882315" CDS 2949967..2950950 /locus_tag="PA2609" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251299.1" /db_xref="GeneID:882315" /translation="MTLSTPAEHPFAQFVRILGKGKRGARSLTREEAREALGMILDGR VEDTQLGAFLMLLRHKEESSEELAGFTEAVRERLQVPSLRVDLDWPSYAGKKRHLPWY LLAAKCLAGHGVRILMHGGGAHTAGRLYSEQLLAALEIPLCHDWLQVEQALERGHLAF IPLGAWMPVLQRMIDLRNTLGLRSPIHSLVRLLNPLNADCILQSIFHPGYQETHREAS RLLGDRAIVIKGEGGEIEVNPDVVAHLYGCDQGEAWDEEWPALSTHRHMKPEQLDPGF LRAVWDGREGDAYGHLAVLSSMALALRALGKNREEAFKEAAHYWATRNESI" misc_feature 2949988..2950947 /locus_tag="PA2609" /note="glycosyl transferase family protein; Region: PRK09071" /db_xref="CDD:181637" gene 2951038..2952012 /locus_tag="PA2610" /db_xref="GeneID:882316" CDS 2951038..2952012 /locus_tag="PA2610" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251300.1" /db_xref="GeneID:882316" /translation="MGQLIDGRWHDQWYDTQKDGRFQRENAQRRHWLGEPAFPAEGGR YHLYVSLACPWAHRTLIVRKLKGLESLVDVSVVSWLMRENGWTFDPAHGSTGDRLDGL AFLHQRYTRDDPHYSGRVTVPLLWDKQAQKIVNNESADIVRIFNSAFDAIGANALDFY PEPLREEIERLNGRIYPAVNNGVYRAGFATRQDAYEEAFVQLFEELDYLEGLLGERRY LAGEYLTEADIRLFTTLVRFDAVYHGHFKCNLRRIEDYPNLSGWLRELYQRPGIGETV DFEHIKGHYYASHRTINPTGIVPLGPRLDLARAPGRERLPGKGIWGEG" misc_feature 2951038..2951988 /locus_tag="PA2610" /note="Glutathionyl-hydroquinone reductase [Energy production and conversion]; Region: ECM4; COG0435" /db_xref="CDD:440204" gene complement(2952017..2953414) /gene="cysG" /locus_tag="PA2611" /db_xref="GeneID:882317" CDS complement(2952017..2953414) /gene="cysG" /locus_tag="PA2611" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="siroheme synthase" /protein_id="NP_251301.1" /db_xref="GeneID:882317" /translation="MDFLPLFHSLQGRLALVVGGGEVALRKARLLADAGARLRVVAPQ IHIELRHLVEQGGGELLERDYQDGDQPGCALIIAATDDEPLNAEVSRAANARGIPVNV VDAPALCSVIFPAIVDRSPLVVAVSSGGDAPVLARLIRAKLETWIPSTYGQLAGLASR FRHRVKELLPDLQQRRVFWENLFQGEIAERVLAGRPAEAERLLEEHLAGGLAHIATGE VYLVGAGPGDPDLLTFRALRLMQQADVVLYDRLVAPSILELCRRDAERLYVGKRRAEH AVPQDRINRLLVELASQGKRVLRLKGGDPFIFGRGGEEIDELAAHGIPFQVVPGITAA SGCAAYAGIPLTHRDHAQSVRFVTGHLKDGTTDLPWQDLVAPGQTLVFYMGLVGLPVI CEQLVAHGRSAQTPAALIQQGTTAQQRVFTGTLENLPQLVAEHEVHAPTLVIVGEVVQ LRDKLAWFEGAREDA" misc_feature complement(2952041..2953414) /gene="cysG" /locus_tag="PA2611" /note="siroheme synthase CysG; Region: cysG; PRK10637" /db_xref="CDD:182606" gene complement(2953416..2954696) /gene="serS" /locus_tag="PA2612" /db_xref="GeneID:882318" CDS complement(2953416..2954696) /gene="serS" /locus_tag="PA2612" /EC_number="6.1.1.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="serine--tRNA ligase" /protein_id="NP_251302.1" /db_xref="GeneID:882318" /translation="MLDPKLVRTQPQEVAARLATRGFQLDVARIEALEEQRKSVQTRT EQLQAERNARSKAIGQAKQRGEDIAPLLADVDRMGSELEEGKRQLDAIQGELDAMLLG IPNLPHESVPVGADEDANVEVRRWGTPKTFDFEVKDHVALGERHGWLDFETAAKLSGA RFALMRGPIARLHRALAQFMINLHTAEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLF KIGRDGEADLYLIPTAEVSLTNIVSGQILDAKQLPLKFVAHTPCFRSEAGASGRDTRG MIRQHQFDKVEMVQIVDPATSYEALEGLTANAERVLQLLELPYRVLALCTGDMGFGAT KTYDLEVWVPSQDKYREISSCSNCGDFQARRMQARYRNPETGKPELVHTLNGSGLAVG RTLVAVLENYQQADGSIRVPEVLKPYMAGIEVIG" misc_feature complement(2953419..2954696) /gene="serS" /locus_tag="PA2612" /note="Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: SerS; COG0172" /db_xref="CDD:439942" gene complement(2954818..2956143) /locus_tag="PA2613" /db_xref="GeneID:882319" CDS complement(2954818..2956143) /locus_tag="PA2613" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="recombination factor protein RarA" /protein_id="NP_251303.1" /db_xref="GeneID:882319" /translation="MDLFRSEPVAQPLAARLRPANLDEYVGQEHLLARGKPLREALEQ GALHSMIFWGPPGVGKTTLARLLAQVSDAHFETISAVLSGVKEIRQAVEVAKQHAAQY GRRTILFVDEVHRFNKSQQDAFLPYVEDGTLIFIGATTENPSFELNNALLSRARVYVL KSLDEAALRKLVGRALNEDKGLGKRKLRLPEESFQVLLAAADGDGRRLLNLLENAADL AEDGSEISPELLQNLLGDTRRRFDKGGEAFYDQISALHKSVRGSNPDAALYWFARMLD GGCDPLYIARRVVRMASEEVGNADPRALGLCLSAWDVQERLGSPEGELAVAQAIVYLA CAPKSNAVYSAFNAAMRDVAESGSREVPLHLRNAPTKLMKSLGYGEEYRYAHDEPDAY AAGEDYFPEDLEPRRYYQPVPRGLELKIRDKLEHLAELDRTSPRQRRKS" misc_feature complement(2954836..2956143) /locus_tag="PA2613" /note="Replication-associated recombination protein RarA (DNA-dependent ATPase) [Replication, recombination and repair]; Region: RarA; COG2256" /db_xref="CDD:441857" gene complement(2956153..2956779) /gene="lolA" /locus_tag="PA2614" /db_xref="GeneID:882320" CDS complement(2956153..2956779) /gene="lolA" /locus_tag="PA2614" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="outer-membrane lipoprotein carrier protein" /protein_id="NP_251304.1" /db_xref="GeneID:882320" /translation="MRLIRTLFVAALAMGASLAHADDSAAVQRLTGLLNKAQTLTARF SQLTLDGSGTRLQETAGQLSLKRPGLFRWHTDAPNEQLLISNGEKVWLYDPDLEQVTI QKLDQRLTQTPALLLSGDISKISESFAITYKEGGNVVDFVLKPKTKDTLFDTLRLSFR SGKVNDMQMIDGVGQRTNILFFDVKMNEALDAKQFTFDVPPGVDVIQE" misc_feature complement(2956156..2956755) /gene="lolA" /locus_tag="PA2614" /note="outer membrane lipoprotein chaperone LolA; Region: lolA; PRK00031" /db_xref="CDD:178807" misc_feature complement(order(2956216..2956218,2956237..2956239, 2956243..2956245,2956249..2956251,2956273..2956275, 2956279..2956281,2956288..2956290,2956309..2956311, 2956315..2956317,2956351..2956353,2956498..2956500, 2956504..2956506,2956531..2956533,2956537..2956539, 2956555..2956557,2956561..2956563,2956591..2956593, 2956597..2956599,2956603..2956605,2956636..2956638, 2956642..2956644,2956648..2956650,2956654..2956656)) /gene="lolA" /locus_tag="PA2614" /note="hydrophobic core; other site" /db_xref="CDD:319983" gene complement(2956805..2959240) /gene="ftsK" /locus_tag="PA2615" /db_xref="GeneID:882321" CDS complement(2956805..2959240) /gene="ftsK" /locus_tag="PA2615" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA translocase FtsK" /protein_id="NP_251305.1" /db_xref="GeneID:882321" /translation="MRRKNSDLKDSTTASHAAAWRQQLHSRLKEGVLIALGALCLYLW MALLTYDSADPSWSHSSQVDQVQNAAGRLGAVSADILFMTLGYFAYLFPLLLGIKTWQ VFRRRNLPWEWNTWLFSWRLVGLIFLILAGSALAYIHFHASGHMPASASAGGAIGQSL GRVAVDALNVQGSTLVFFALFLFGLTVFADLSWFKVMDVTGKITLDFFELIQNAFNRW MGARAERKQLVAQLREVDERVAEVVAPSVPDRREQSKAKERLLEREEALAKHMSEREK RPPPKIDPPPSPKAPEPSKRVLKEKQAPLFVDTAVEGTLPPLSLLDPAEVKQKSYSPE SLEAMSRLLEIKLKEFGVEVSVDSVHPGPVITRFEIQPAAGVKVSRISNLAKDLARSL AVISVRVVEVIPGKTTVGIEIPNEDRQMVRFSEVLSSPEYDEHKSTVPLALGHDIGGR PIITDLAKMPHLLVAGTTGSGKSVGVNAMLLSILFKSTPSEARLIMIDPKMLELSIYE GIPHLLCPVVTDMKEAANALRWSVAEMERRYRLMAAMGVRNLAGFNRKVKDAEEAGTP LTDPLFRRESPDDEPPQLSTLPTIVVVVDEFADMMMIVGKKVEELIARIAQKARAAGI HLILATQRPSVDVITGLIKANIPTRIAFQVSSKIDSRTILDQGGAEQLLGHGDMLYLP PGTGLPIRVHGAFVSDDEVHRVVEAWKLRGAPDYIEDILAGVDEGGGGGGSFDGGDGS GEGSEDDPLYDEAVRFVTESRRASISAVQRKLKIGYNRAARMIEAMEMAGVVTPMNTN GSREVIAPAPVRD" misc_feature complement(2958638..2959162) /gene="ftsK" /locus_tag="PA2615" /note="4TM region of DNA translocase FtsK/SpoIIIE; Region: FtsK_4TM; pfam13491" /db_xref="CDD:463896" misc_feature complement(2956817..>2958310) /gene="ftsK" /locus_tag="PA2615" /note="DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, chromosome partitioning]; Region: FtsK; COG1674" /db_xref="CDD:441280" gene 2959468..2960418 /gene="trxB1" /locus_tag="PA2616" /db_xref="GeneID:882322" CDS 2959468..2960418 /gene="trxB1" /locus_tag="PA2616" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="thioredoxin reductase" /protein_id="NP_251306.1" /db_xref="GeneID:882322" /translation="MSEVKHSRLIILGSGPAGYTAAVYAARANLKPVVITGIQPGGQL TTTTEVDNWPGDVEGLTGPALMTRMQQHAERFDTEIVYDHIHTAELQQRPFTLKGDSG TYTCDALIIATGASAQYLGMSSEEAFMGKGVSACATCDGFFYRNQVVCVVGGGNTAVE EALYLANIAKEVHLIHRRDKLRSEKILQDKLFDKAENGNVHLHWNTTLDEVLGDASGV TGVRLKSTIDGSTSELSLAGVFIAIGHKPNTDLFQGQLEMRDGYLRIHGGSEGNATQT SIEGVFAAGDVADHVYRQAITSAGAGCMAALDAEKYLDDH" misc_feature 2959468..2960409 /gene="trxB1" /locus_tag="PA2616" /note="thioredoxin reductase; Provisional; Region: PRK10262" /db_xref="CDD:182343" gene 2960456..2961136 /gene="aat" /locus_tag="PA2617" /db_xref="GeneID:882323" CDS 2960456..2961136 /gene="aat" /locus_tag="PA2617" /EC_number="2.3.2.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="leucyl/phenylalanyl-tRNA--protein transferase" /protein_id="NP_251307.1" /db_xref="GeneID:882323" /translation="MLTWLSRTDFDFPPLDKALQEPNGLLAAGGDLNPQRLVAAYRHG CFPWYQDGQPILWWSPDPRTVLFPDELHVSRSLAKCLRQQRFEVTFNRDFRAVIQACA APRNYADGTWITTPMQLAYQELHLRGIAHSVEVWQERQLVGGLYGLAMGRLFFGESMF SRADNASKVGFVTLVRHLRDAGFVLIDCQMPTRHLHSLGARAISRGEFADYLQRYRDQ PPTGDLDF" misc_feature 2960489..2961115 /gene="aat" /locus_tag="PA2617" /note="Leu/Phe-tRNA-protein transferase [Posttranslational modification, protein turnover, chaperones]; Region: Aat; COG2360" /db_xref="CDD:441927" gene 2961191..2961898 /locus_tag="PA2618" /db_xref="GeneID:882324" CDS 2961191..2961898 /locus_tag="PA2618" /EC_number="2.3.2.8" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="arginyl-tRNA--protein transferase" /protein_id="NP_251308.1" /db_xref="GeneID:882324" /translation="MTELARLKFYATQPHPCSYLPEEQATTLFLDPSQPMDTQLYASL SEVGFRRSGDHLYRPHCQHCTACIAARIPVADFSPNRQQRRILKRNAELQVIRKRPSF NEEYYDLYRRYIEQRHADGDMYPPSRDQFATFLVRDLPFCCFFEFRLHGRLLAIAVTD VLPNGLSAVYTFYDPDEEQRSLGRYAILWQIAETERLGLQAVYLGYWIKNCRKMNYKT QYRPIELFVNQRWVALT" misc_feature 2961191..2961895 /locus_tag="PA2618" /note="arginyl-tRNA-protein transferase; Provisional; Region: PRK01305" /db_xref="CDD:234939" gene 2962003..2962221 /gene="infA" /locus_tag="PA2619" /db_xref="GeneID:882325" CDS 2962003..2962221 /gene="infA" /locus_tag="PA2619" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-1" /protein_id="NP_251309.1" /db_xref="GeneID:882325" /translation="MSKEDSFEMEGTVVDTLPNTMFRVELENGHVVTAHISGKMRKNY IRILTGDKVRVELTPYDLSKGRITYRAR" misc_feature 2962003..2962218 /gene="infA" /locus_tag="PA2619" /note="translation initiation factor IF-1; Validated; Region: infA; PRK00276" /db_xref="CDD:178954" misc_feature order(2962045..2962053,2962069..2962071,2962105..2962107, 2962114..2962119,2962132..2962143,2962192..2962194, 2962198..2962200) /gene="infA" /locus_tag="PA2619" /note="rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:239898" misc_feature order(2962105..2962107,2962117..2962119,2962210..2962212) /gene="infA" /locus_tag="PA2619" /note="predicted 30S ribosome binding site [active]" /db_xref="CDD:239898" gene complement(2962303..2964579) /gene="clpA" /locus_tag="PA2620" /db_xref="GeneID:882326" CDS complement(2962303..2964579) /gene="clpA" /locus_tag="PA2620" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP-binding protease component ClpA" /protein_id="NP_251310.1" /db_xref="GeneID:882326" /translation="MLNRELEVTLNLAFKEARAKRHEFMTVEHLLLALLDNEAAATVL RACGANLDKLRRDLQEFIDSTTPLIPQHDDERETQPTLGFQRVLQRAVFHVQSSGKRE VTGANVLVAIFSEQESQAVFLLKQQSIARIDVVNYIAHGISKVPGHAEHPQDGEQDMQ DEEGGESATSNHPLDAYASNLNELARQGRIDPLVGREHEVERVAQILARRRKNNPLLV GEAGVGKTAIAEGLAKRIVDGQVPDLLADSVVYSLDLGALLAGTKYRGDFEKRFKALL NELRKRPHAVLFIDEIHTIIGAGAASGGVMDASNLLKPVLSSGEIRCIGSTTFQEFRG IFEKDRALARRFQKVDVTEPSVEDTYGILKGLKGRFEQHHHIEYSDEALRAAAELAAR YINDRHMPDKAIDVIDEAGAYQRLQPEEKRVKRIEVAQVEDIVAKIARIPPKHVTTSD KELLRNLERDLKLTVFGQDDAIESLSTAIKLSRAGLKAPDKPVGSFLFAGPTGVGKTE VARQLAKALGVELVRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTEAITKTPHCVL LLDEIEKAHPEVFNLLLQVMDHGTLTDNNGRKADFRNIILIMTTNAGAEVAARASIGF NQQDHTTDAMEVIKKSFTPEFRNRLDTIIQFGRLSTETIKSVVDKFLTELQAQLEDKR VQLEVSDAARGWLAEKGYDVQMGARPMARLIQDKIKRPLAEEILFGELAEHGGLVHVD LKGDELAFEFEITAAEPA" misc_feature complement(2962312..2964579) /gene="clpA" /locus_tag="PA2620" /note="ATP-dependent Clp protease ATP-binding subunit; Provisional; Region: clpA; PRK11034" /db_xref="CDD:236828" gene complement(2964607..2964975) /locus_tag="PA2621" /db_xref="GeneID:882327" CDS complement(2964607..2964975) /locus_tag="PA2621" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease adapter protein Clp" /protein_id="NP_251311.4" /db_xref="GeneID:882327" /translation="MHAPSQIRLTFNQDHPEPHEHEDEGAGLAVQESKPVLQPPPLYK VVLFNDDYTPMDFVVEVLEVFFNMDREKATKIMLTVHTQGKAVCGLFTRDVAETKAMQ VNQYARESQHPLLCEIEKDS" misc_feature complement(2964613..2964930) /locus_tag="PA2621" /note="ATP-dependent Clp protease adaptor protein ClpS; Reviewed; Region: clpS; PRK00033" /db_xref="CDD:178809" gene 2965201..2965473 /gene="cspD" /locus_tag="PA2622" /db_xref="GeneID:882328" CDS 2965201..2965473 /gene="cspD" /locus_tag="PA2622" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cold-shock protein CspD" /protein_id="NP_251312.1" /db_xref="GeneID:882328" /translation="MLSGKVKWFNNAKGYGFILAEGRDEDLFAHYSAIQMDGYKTLKA GQPVNFEIIQGPKGLHAINISPATATTAAPSAPAPQEEPQATPIEA" misc_feature 2965201..2965392 /gene="cspD" /locus_tag="PA2622" /note="Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain. Both domains...; Region: S1_like; cl09927" /db_xref="CDD:471952" misc_feature order(2965222..2965224,2965249..2965251,2965282..2965284, 2965369..2965371) /gene="cspD" /locus_tag="PA2622" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:239905" misc_feature order(2965240..2965260,2965279..2965290) /gene="cspD" /locus_tag="PA2622" /note="RNA-binding motif [active]" /db_xref="CDD:239905" gene complement(2965546..2966802) /gene="icd" /locus_tag="PA2623" /db_xref="GeneID:882329" CDS complement(2965546..2966802) /gene="icd" /locus_tag="PA2623" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="isocitrate dehydrogenase" /protein_id="NP_251313.1" /db_xref="GeneID:882329" /translation="MGYQKIQVPATGDKITVNADMSLSVPKNPIIPFIEGDGIGVDIS PVMIKVVDAAVEKAYKGERKIAWMEVYAGEKATQVYDQDTWLPQETLDAVRDYVVSIK GPLTTPVGGGIRSLNVALRQQLDLYVCQRPVRWFEGVPSPVKKPGDVDMVIFRENSED IYAGVEWKAGSPEAEKVIKFLTEEMGVKKIRFTENCGIGIKPVSQEGTKRLVRKALQY AVDNDRSSVTLVHKGNIMKFTEGAFKDWGYEVARDEFGAELLDGGPWMQFKNPKTGKN VVVKDVIADAMLQQILLRPAEYDVIATLNLNGDYLSDALAAEVGGIGIAPGANLSDSV AMFEATHGTAPKYAGQDKVNPGSLILSAEMMLRHMGWTEAADLIIKGTNGAIAAKTVT YDFERLMDGATLLSCSEFGDAMIAKM" misc_feature complement(2965549..2966778) /gene="icd" /locus_tag="PA2623" /note="isocitrate dehydrogenase; Reviewed; Region: PRK07006" /db_xref="CDD:180792" gene 2967161..2969386 /gene="idh" /locus_tag="PA2624" /db_xref="GeneID:882330" CDS 2967161..2969386 /gene="idh" /locus_tag="PA2624" /EC_number="1.1.1.42" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="isocitrate dehydrogenase" /protein_id="NP_251314.1" /db_xref="GeneID:882330" /translation="MSIRSKITYTFTDEAPALATYSLLPIVKAFAASAGIDVETSDIS LAGRILANFADRLEADQRIEDDLARLAVLATSPDANIIKLPNISASVPQLKGAIAELQ GLGYKVPDFPEDPQTDEEKEVRARYAKILGSAVNPVLREGNSDRRAPAAVKAYARKHP HSMGKWSMASRSHADYMRGGDFFSSEQSITMAKAGDVRIEFVGKDGKVEVKKQLSLQE GEVLDSMFMSCGKLRDFFEKTLQDCKETGVMWSLHVKATMMKISHPIVFGHAVSVYYK DVFDKWGQLFEELGVNPNNGISSVYDKIKSLPASQQEEILHDIHEVYSHRPEMAMVDS VKGITNLHIPSDVIVDASMPAMIRNSGQMWGKDGKQKDTKAVMPESTYARIYQEMINF CKTNGAFDPTTMGSVPNVGLMAQKAEEYGSHDKTFEMTADGTMRVVLADGSVLMQHKV ETGDIWRACQTKDAPIRDWVKLAVTRARQSDTPAIFWLDPERAHDRELRKKVELYLKD HDLTGLDISIMGYNEAIRVSMERLIRGKDTISVTGNVLRDYLTDLFPIMELGTSAKML SIVPLMAGGGMYETGAGGSAPKHVQQLVEENYLRWDSLGEFLALAVSLEETGIKTGNA KAKLLGKALDEATGKLLDNNKSPSRKVGDIDNRGSHFYLAMYWAQALAAQNEDAELKA HFAPLAKALTEQEATIVAELNAVQGKPAEIGGYYRSNPELTSKVMRPSATFNAAIDSL A" misc_feature 2967173..2969380 /gene="idh" /locus_tag="PA2624" /note="Monomeric isocitrate dehydrogenase [Energy production and conversion]; Region: IcdM; COG2838" /db_xref="CDD:442086" gene 2969473..2969943 /locus_tag="PA2625" /db_xref="GeneID:882331" CDS 2969473..2969943 /locus_tag="PA2625" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251315.1" /db_xref="GeneID:882331" /translation="MSWHPHVTVATIVEDQGRFLLVEEQADGREVLNQPAGHLEPAES LLEAALRETLEETGWEVELSAVTGIYLYTAPSNGVTYQRVCFAARPVRHHPERALDDG IIGPRWLTRDELAAQPQRWRSHLVLRCIDDYLAGGRYPLALIRDTHVSPSLPQA" misc_feature 2969491..2969904 /locus_tag="PA2625" /note="uncharacterized NUDIX hydrolase subfamily; Region: NUDIX_Hydrolase; cd03675" /db_xref="CDD:467543" gene 2969987..2971114 /gene="trmU" /locus_tag="PA2626" /db_xref="GeneID:882332" CDS 2969987..2971114 /gene="trmU" /locus_tag="PA2626" /EC_number="2.8.1.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tRNA-specific 2-thiouridylase MnmA" /protein_id="NP_251316.1" /db_xref="GeneID:882332" /translation="MSESAPTPRRERVIVGMSGGVDSSVSALLLLQQGYQVEGLFMKN WDEDDGTEYCTAREDLADAQAVCDRIGIKLHTANFAAEYWDNVFEHFLAEYKAGRTPN PDILCNREIKFKAFLDYALMLGADLIATGHYVRRRDRDGRTELLKGLDPNKDQSYFLH AVGGEQIARSLFPVGELEKPEVRAIAEKHGLATAKKKDSTGICFIGERRFTDFLKQYL PAQPGDIETTEGKVIGRHSGLMYHTIGQRQGLGIGGLKEAGDDPWYVLGKDLQRNVLL VGQGNDHPLLFSRALLASRIYWVNPVELERPRRLRAKVRYRQSDQDCVLEKTAEGYRA VFDEPQRAVTPGQSVVFYDGDVCLGGGVIETAEAWDFGGRP" misc_feature 2970020..2971090 /gene="trmU" /locus_tag="PA2626" /note="tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]; Region: MnmA; COG0482" /db_xref="CDD:440250" gene 2971111..2971731 /locus_tag="PA2627" /db_xref="GeneID:882333" CDS 2971111..2971731 /locus_tag="PA2627" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="high frequency lysogenization protein HflD" /protein_id="NP_251317.1" /db_xref="GeneID:882333" /translation="MSDPRQQLIALGAVFESAALVDKLARTGQISEAPLGCMLGSLLA RNPASTLDVYGGDSLNLRDGFKALASALERKPGSLQREPLRYALAMLTLERQLDKRGD MLDLIGQRLDQVEQQVQHFGLVHENVIASFASIYQDTLSTFRQRIQVHGDMRHLQVSS NAARIRALLLAGIRSARLWRQLGGSRWQMVFSRRRLLNELYPLLRG" misc_feature 2971111..2971725 /locus_tag="PA2627" /note="lysogenization regulator HflD; Region: PRK00218" /db_xref="CDD:234690" gene 2971734..2972624 /locus_tag="PA2628" /db_xref="GeneID:882334" CDS 2971734..2972624 /locus_tag="PA2628" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251318.1" /db_xref="GeneID:882334" /translation="MAMAGSQPQRRNSPTQGAAMLALSALFFALMGGLIREASSTVNN ETVVFFRNLVGVLFFLPLALTRGIGPLRTRRPLSHLLRTTYGLGGMYCYFYALAHLPL TDAMLFSYAAPVFTPLIAHLWIKEPLTRRMMVATLVGFLGVLLVARPSGAVVAPIALV GIASSLMAACAFVSIREMSDSEPAYRIVFYFALFGTLFSAVPLAWAWQPLNGQELLLL LGAGLFASLGQLTMSQAYALASPGVIGPIAYMAIVFAGVIAWLRWDELPSHTSLLGAA LIFAASLIPLLGNRPAERPR" misc_feature 2971773..2972615 /locus_tag="PA2628" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene 2972699..2974069 /gene="purB" /locus_tag="PA2629" /db_xref="GeneID:882336" CDS 2972699..2974069 /gene="purB" /locus_tag="PA2629" /EC_number="4.3.2.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="adenylosuccinate lyase" /protein_id="NP_251319.1" /db_xref="GeneID:882336" /translation="MQLSSLTAVSPVDGRYAGKTSSLRPIFSEYGLIRFRVMVEVRWL QRLAAHAGIPEVAPFSAEANALLDSLASDFQLEHAERIKEIERTTNHDVKAVEYLLKE QAAKLPELAAVSEFIHFACTSEDINNLSHALMLREGRDSVLLPLMRQIAEAIRELAVK LADVPMLSRTHGQPASPTTLGKELANVVYRLERQIKQVAGIELLGKINGAVGNYNAHL SAYPEVDWEANARQFIEGDLGLTFNPYTTQIEPHDYIAELFDAIARFNTILIDFDRDV WGYISLGYFKQKTVAGEIGSSTMPHKVNPIDFENSEGNLGIANALFQHLASKLPISRW QRDLTDSTVLRNLGVGIAHSIIAYEASLKGIGKLELNAQRIAEDLDACWEVLAEPVQT VMRRYGVENPYEKLKELTRGKGISAEALQTFIEELAIPAEAKVELKKLTPAGYVGNAA AQAKRI" misc_feature 2972699..2974066 /gene="purB" /locus_tag="PA2629" /note="adenylosuccinate lyase; Provisional; Region: PRK09285" /db_xref="CDD:236452" gene 2974129..2975298 /locus_tag="PA2630" /db_xref="GeneID:882337" CDS 2974129..2975298 /locus_tag="PA2630" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251320.1" /db_xref="GeneID:882337" /translation="MNADTPLQLLGGLTAAEFLRDYWQRKPLLVRQAIPDFESPLSAD ELAGLSLEESVESRIVLEHGKTPWEMRRGPFQEEDYQHLPEQDWTLLVQAVDQFVPEV AQLLEQFRFLPSWRIDDVMISYAAPGGGVGPHFDNYDVFLLQGHGRRRWKVGQMCSSD SPLREHADLRILADFEQSDEWVLEPGDMLYLPPRLAHYGIAEDECMTYSIGFRAPSAA EVLTHFTDFLGQFLSDEERYTDAGLQPVGDDPHQIQRDALERLQGLIQEHMSDERLLL TWFGQFMTEPRYPELVAGEEIPEEELFGALEDGALLVRNPSARLAWSEIDIGLVLFAS GQSVLLPGQLKELLKLVCSADALHLENLGQWLADDDARKLLAELVKQGSLEFADE" misc_feature 2974165..2974989 /locus_tag="PA2630" /note="Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain [Translation, ribosomal structure and biogenesis]; Region: RoxA; COG2850" /db_xref="CDD:442098" misc_feature 2974927..2975283 /locus_tag="PA2630" /note="ROXA-like winged helix; Region: ROXA-like_wH; pfam20514" /db_xref="CDD:466663" gene 2975291..2975716 /locus_tag="PA2631" /db_xref="GeneID:882338" CDS 2975291..2975716 /locus_tag="PA2631" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_251321.1" /db_xref="GeneID:882338" /translation="MNKIRVRVADWQKDNAELRRIREAVFIAEQSVPPELEWDAEDDE AVHFLAYEGEYAIGTARLLGDGHIGRVSVLKDWRGLKVGDALMRAAIEEAERRGLKRQ LLTAQVYAIPFYERLGFKVDSGEFLDAGLPHVDMVRDSD" misc_feature 2975324..2975707 /locus_tag="PA2631" /note="Predicted N-acyltransferase, GNAT family [General function prediction only]; Region: ElaA; COG2153" /db_xref="CDD:441756" gene 2975723..2976343 /locus_tag="PA2632" /db_xref="GeneID:882339" CDS 2975723..2976343 /locus_tag="PA2632" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251322.1" /db_xref="GeneID:882339" /translation="MSDTPETSPADLPAIEFSSPGRFAVRNPASAAPPAERWEPAPFR LGEHEPLERFEHPQEARAHALALLQQARRSLCLHSPDLESWLYHHSSIQEACTRFLLA NPRNRLRILVGDSAQAVRNGHRLISLSRRLSSNCLIRRLNPDYPKEDDAFLLADDQGL LLRPKPAQPAGYACYRAAGRVRQLQARFEQAWDTSLSDPDLRSFLL" gene 2976340..2977161 /locus_tag="PA2633" /db_xref="GeneID:882340" CDS 2976340..2977161 /locus_tag="PA2633" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251323.1" /db_xref="GeneID:882340" /translation="MTLLRTTLLSSLLATVVLGASAAPRTEVIPLNYRTADDVMAVAQ SVIGSEGKVTAYGNQLIVNAEPAKIRELQSVLQQIDSRPHRLLITVDTSENLQQDSRG YSVDGSASAGNIEIQSGRGEVNGKDRVRIIRRSTDSRSGGSQQVQATEGYPALIQVGQ SVPITSTATGPYGQIYSQTEYRNVNRGFYVTATLTGNLVHVTISSSNDRLSQSHPGVI DTQSTDTRVSGKLGEWITLGGVSEQNQADQRGFVRRYSTQGRDDTSLRLKVETLD" misc_feature 2976379..2977086 /locus_tag="PA2633" /note="Type II secretory pathway component GspD/PulD (secretin) [Intracellular trafficking, secretion, and vesicular transport]; Region: PulD; COG1450" /db_xref="CDD:441059" gene 2977756..2979351 /gene="aceA" /locus_tag="PA2634" /db_xref="GeneID:882341" CDS 2977756..2979351 /gene="aceA" /locus_tag="PA2634" /EC_number="4.1.3.1" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="isocitrate lyase" /protein_id="NP_251324.1" /db_xref="GeneID:882341" /translation="MSAYQNEIKAVAALKEKNGSSWSAINPEYAARMRIQNRFKTGLD IAKYTAAIMRKDMAEYDADSSVYTQSLGCWHGFIGQQKLISIKKHLKTTNKRYLYLSG WMVAALRSDFGPLPDQSMHEKTAVSGLIEELYTFLRQADARELDLLFTGLDAARAAGD KAKEAELLAQIDNFETHVVPIIADIDAGFGNAEATYLLAKKMIEAGACCIQIENQVSD EKQCGHQDGKVTVPHIDFLAKINAVRYAFLELGVDDGVIVARTDSLGAGLTKQIAVTN EPGDLGDLYNSFLDCEEISESELGNGDVVIKREGKLLRPKRLASNLFQFRKGTGEDRC VLDCITSLQNGADLLWIETEKPHVGQIKAMVDRIREVIPNAKLVYNNSPSFNWTLNFR QQVFDAFVAEGKDVSAYDRNKLMSVEYDDTELAKVADEKIRTFQRDGSAHAGIFHHLI TLPTYHTAALSTDNLAKGYFADEGMLAYVKGVQRQELRQGIACVKHQNMAGSDIGDNH KEYFAGEAALKASGKDNTMNQFH" misc_feature 2977756..2979348 /gene="aceA" /locus_tag="PA2634" /note="isocitrate lyase; Provisional; Region: PRK06498" /db_xref="CDD:180592" protein_bind complement(2979171..2979183) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 2979530..2981548 /locus_tag="PA2635" /db_xref="GeneID:882342" CDS 2979530..2981548 /locus_tag="PA2635" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251325.1" /db_xref="GeneID:882342" /translation="MSLEKKDAILFGDGDELPSNHSNNPHMNDLIAGLGRRQVLAGGA ALGALAFLGVALPASAAPAEAQVPAAEGLRGLPFKRRNRLPFEAIASGRADTIRVPAG YKATPFIPWGTPISGSYPGFLDDASNSAQDQAEQIGMHHDGMHFFPIDAQFGFGGGHI SNHGLLVLNHEYIDAPLLHTNGPTVVDGKRTVADEVRKEINAHGVSVVEIRRNVRGEW NVVPSQRNRRITAATPMRIAGPARGHELLRTRHSPDGTRTRGTHNNCSNGFTPWGTYL TCEENWVGYFSTQDSELPRELTRYGIRNTSRFGWETLAGDEFERFDATRKGKQAQDDY RNEPNNFGWIVEIDPFDPQSVPVKRTALGRFAHEGLVFAPVKPGRQVVCYSGDDSQNE YIYKYVSRDKFRPGRSNTRLLDEGTLYVARFNADGSGQWLPLDIADGNFRAACRKAGV SFADQGEVLINTRLAADVLGATKMDRPEWGAVNPDNGDVYFTLTNNTSRTVADAANPR VKNAYGHIIRWRERSRDYAGQRFTWDLFMLAGPGEDSRGPDGKPLNQDNILASPDGLW FDPEGRLWIQTDMSGSQLSSGPFGNNQMLVADPRTGELKRFLTGPLGCEVTGIAATPD FRTLFINIQHPGEGSTADNLLSTWPDGPGRRPRSATVVITREDGRRLL" misc_feature 2979701..2981530 /locus_tag="PA2635" /note="Secreted phosphatase, PhoX family [General function prediction only]; Region: PhoX; COG3211" /db_xref="CDD:442444" gene 2981627..2982181 /locus_tag="PA2636" /db_xref="GeneID:882343" CDS 2981627..2982181 /locus_tag="PA2636" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251326.1" /db_xref="GeneID:882343" /translation="MECRLPSLWKDASMPKRNRLSRAVGAINLLPRRLRSRSLTLLLG SQVRFAGTARVRIHELGQERAILSLKNRRPVQNHIKGIHAAAMALLAESASGFLVGMN VPDDKLPLIKTMKIDYLKRAQGNLTAIATLEAGQIEQIRQQDKGEVRVAVLVSDENGN QPIACEMVWAWVGKKPRVATAAPR" misc_feature 2981777..2982142 /locus_tag="PA2636" /note="The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated...; Region: hot_dog; cl00509" /db_xref="CDD:469797" misc_feature order(2981870..2981872,2981957..2981959,2981978..2981989) /locus_tag="PA2636" /note="CoenzymeA binding site [chemical binding]; other site" /db_xref="CDD:239527" misc_feature order(2981873..2981875,2981879..2981881,2981888..2981890, 2981960..2981974,2981978..2981980) /locus_tag="PA2636" /note="subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:239527" misc_feature order(2981876..2981878,2981900..2981905,2981912..2981917, 2981957..2981959) /locus_tag="PA2636" /note="PHB binding site [active]" /db_xref="CDD:239527" protein_bind 2982462..2982480 /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA2637" /bound_moiety="Fur" gene 2982781..2983194 /gene="nuoA" /locus_tag="PA2637" /db_xref="GeneID:882344" CDS 2982781..2983194 /gene="nuoA" /locus_tag="PA2637" /EC_number="1.6.5.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit A" /protein_id="NP_251327.1" /db_xref="GeneID:882344" /translation="MPNPAELAAHHWGFAAFLLGVVGLLAFMLGVSSLLGSKAFGRSK NEPFESGIVPTGGARLRLSAKFYLVAMLFVIFDVEALFLFAWSVSVRESGWAGLIEAT IFIAILLAGLVYLWRIGALDWAPESRRKRQAKLKQ" misc_feature 2982793..2983152 /gene="nuoA" /locus_tag="PA2637" /note="NADH:ubiquinone oxidoreductase subunit A; Validated; Region: PRK06602" /db_xref="CDD:180638" gene 2983205..2983882 /gene="nuoB" /locus_tag="PA2638" /db_xref="GeneID:882345" CDS 2983205..2983882 /gene="nuoB" /locus_tag="PA2638" /EC_number="1.6.5.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit B" /protein_id="NP_251328.1" /db_xref="GeneID:882345" /translation="MQYKLTRIDPDAANDQYPIGERETVADPLVEGQVHKNIFMGKLE DVLNSTVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMV IAGTCFIKMAPVIQRLYEQMLEPKWVISMGSCANSGGMYDIYSVVQGVDKFLPVDVYI PGCPPRPEAFLQGLMLLQESIGQERRPLSWVVGDQGVYRAEMPAQKDLKREQRIQVTN LRSPDEV" misc_feature 2983262..2983777 /gene="nuoB" /locus_tag="PA2638" /note="NADH-quinone oxidoreductase subunit NuoB; Region: PRK06411" /db_xref="CDD:235797" gene 2983963..2985744 /gene="nuoD" /locus_tag="PA2639" /db_xref="GeneID:882346" CDS 2983963..2985744 /gene="nuoD" /locus_tag="PA2639" /EC_number="1.6.5.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NADH:-quinone oxidoreductase subunit C/D" /protein_id="NP_251329.1" /db_xref="GeneID:882346" /translation="MTADSALYIPPYKADDQDIVVELNSRFGAETFTVQPTRTGMPVL WVPRERLIEVLTFLRQVPKPYVMLYDLHGVDERLRTHRRGLPSADFSVFYHLMSLERN SDVMIKVALSERDLNLPTATRIWPNANWYEREVWDMYGITFTGHPHLTRMLMPPTWQG HPLRKDYPARATEFDPYSLSAAKQDLEQEALRFKPEDWGMKRHGENEDYMFLNLGPNH PSAHGAFRIILQLDGEEIIDCVPEIGYHHRGAEKMAERQSWHSFIPYTDRIDYLGGVM NNLPYVLSVEKLAGIKVPQRVDVIRIMMAEFFRILNHLLYLGTYIQDVGAMTPVFFTF TDRQRAYKVVEAITGFRLHPAWYRIGGVAHDLPRGWDKLVREFLDWMPKRLDEYETAA LKNSILRGRTIGVAQYNTKEALEWGTTGAGLRATGCDFDLRKARPYSGYENFEFEVPL AHNGDAYDRCMVKMGEMRQSLRIIEQCLKNMPEGPYKADHPLTTPPPKERTLQHIETL ITHFLQVSWGPVMPANEAFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSFAHLQQIP SVINGSMIADLIAYLGSIDFVMADVDR" misc_feature 2984017..2985741 /gene="nuoD" /locus_tag="PA2639" /note="bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional; Region: PRK11742" /db_xref="CDD:236965" gene 2985746..2986246 /gene="nuoE" /locus_tag="PA2640" /db_xref="GeneID:882347" CDS 2985746..2986246 /gene="nuoE" /locus_tag="PA2640" /EC_number="1.6.5.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit E" /protein_id="NP_251330.1" /db_xref="GeneID:882347" /translation="MSQSNLIQTDRFVLSETERSSIEHEMHHYEDPRAASIEALKIVQ KQRGWVPDGAIPAIGEVLGIPASDVEGVATFYSQIFRQPVGRHIIRVCDSMVCYIGGH ESVVGEIQKQLGIGLGQTTADGRFTLLPVCCLGNCDKAPALMIDDDTHGDVRPDGVAK LLEAYV" misc_feature 2985782..2986240 /gene="nuoE" /locus_tag="PA2640" /note="NADH-quinone oxidoreductase subunit NuoE; Region: PRK07539" /db_xref="CDD:181024" misc_feature order(2986007..2986009,2986013..2986015,2986133..2986141) /gene="nuoE" /locus_tag="PA2640" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:239362" misc_feature order(2986019..2986021,2986034..2986036,2986142..2986144, 2986154..2986156) /gene="nuoE" /locus_tag="PA2640" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:239362" gene 2986243..2987589 /gene="nuoF" /locus_tag="PA2641" /db_xref="GeneID:882348" CDS 2986243..2987589 /gene="nuoF" /locus_tag="PA2641" /EC_number="1.6.5.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase I subunit F" /protein_id="NP_251331.1" /db_xref="GeneID:882348" /translation="MTLTSIGPANRMARSAETHPLTWRLREDAQPVWLEEYQSKDGYA AARKALTQMAQDDIVQTVKDSGLKGRGGAGFPTGVKWGLMPKDESLNIRYLLCNADEM EPNTWKDRMLMEQLPHLLVEGMLISARALKAYRGYIFLRGEYVDAARNLNRAIDEAKA AGLLGKNILGSGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAAVGVW GKPTCVNNVETLCNVPAIVGNGVDWYKTLARPGSEDMGTKLMGFSGKVKNPGLWELPF GVSARELFEDYAGGMRDGFQLKAWQPGGAGTGFLLPEHLDAQMFAGGIAKVGTRMGTG LAMAVDDSINMVSLLRNMEEFFARESCGWCTPCRDGLPWSVKLLRALERGEGQPGDLE TLEQLVNFLGPGKTFCAHAPGAVEPLGSALKYFRAEFEAGISRQPSAAPRPATVGA" misc_feature 2986264..2987562 /gene="nuoF" /locus_tag="PA2641" /note="NADH-quinone oxidoreductase subunit NuoF; Region: PRK11278" /db_xref="CDD:236891" gene 2987721..2990438 /gene="nuoG" /locus_tag="PA2642" /db_xref="GeneID:882349" CDS 2987721..2990438 /gene="nuoG" /locus_tag="PA2642" /EC_number="1.6.5.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit G" /protein_id="NP_251332.1" /db_xref="GeneID:882349" /translation="MATIHVDGKTLEVDGADNLLQACLSLGLDIPYFCWHPALGSVGA CRQCAVKQYTDENDKRGRLVMSCMTPATDNTWISIEDEEAKQFRASVVEWLMTNHPHD CPVCEEGGHCHLQDMTVMTGHNERRYRFTKRTHQNQELGPFIAHEMNRCIACYRCVRY YKDYAGGTDLGVYGAHDNVYFGRVEDGVLESEFSGNLTEVCPTGVFTDKTHSERYNRK WDMQFAPSICHGCSSGCNISPGERYGEIRRIENRYNGSVNHYFLCDRGRFGYGYVNRE DRPRQPLLVLSKQKLSLDGALDQAAALLKERKVVGIGSPRASLESNFALRELVGEGNF YSGINEGELDRLRLILQVMQEGPLPVPSIRDIEDHDAVFVLGEDLTQTAARIALALRQ SVKGKAVEMAADMKVQPWLDAAVKNIAQHAQNPLFIASVSATRLDDVAEETVHAAPDD LARLGFAVAHAIDPSAPSVADLDPQAQAFAQRITDALLAAKRPLVVSGNSLGNKALIE AAANIAKALKQREKNGSISLVVGEANSLGLALFGGDSVEAALERLTSGQADAVVVLEN DLYRRTDAARVDAALAAAKVVIVADHQQTATTAKAHLVLPAASFAEGDGTLVSQEGRA QRFFQVFDPTYYDARNMVREGWRWLHAIHSTLQGKRVDWTQLDHVTEAVAEAKPILAG IRDAAPAASFRIKGLKLAREPHRYSGRTAMRANISVHEPRTPQDIDSAFAFSMEGYSG SQEDRQQIPFAWSPGWNSPQAWNKFQDEVGGHLRAGDPGVRLIEPKGEGLDWFQAVPV PFSAKADSWKVVPLYHLFGSEENSSRAAPIQQRIPETYVALSKEDADRLGVNDGATLG FQLKGQALRLPLRIDEQLGAGLIGLPVGFAGIPAAIAGCSVEGLQEAAQ" misc_feature 2987730..2989676 /gene="nuoG" /locus_tag="PA2642" /note="NADH-quinone oxidoreductase, chain G; Region: NuoG; TIGR01973" /db_xref="CDD:273904" misc_feature 2990139..2990426 /gene="nuoG" /locus_tag="PA2642" /note="C-terminal region of the NuoG-like subunit (of the variant with a [4Fe-4S] cluster, N7) of the NADH-quinone oxidoreductase/NADH dehydrogenase-1 (NDH-1) found in various bacteria. The NDH-1 is the first energy-transducting complex in the respiratory chain...; Region: MopB_CT_NDH-1_NuoG2-N7; cd02788" /db_xref="CDD:239189" gene 2990435..2991430 /gene="nuoH" /locus_tag="PA2643" /db_xref="GeneID:882350" CDS 2990435..2991430 /gene="nuoH" /locus_tag="PA2643" /EC_number="1.6.5.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit H" /protein_id="NP_251333.1" /db_xref="GeneID:882350" /translation="MSWLTPALVTIILTVVKAIVVLLAVVICGALLSWVERRLLGLWQ DRYGPNRVGPFGAFQLGADMVKMFFKEDWTPPFADKMIFTLAPVIAMGALLVAFAIVP ITPTWGVADLNIGILFFFAMAGLTVYAVLFAGWSSNNKFALLGSLRASAQTISYEVFL ALSLMGIVAQVGSFNMRDIVQYQIDNVWFIIPQFFGFCTFIIAGVAVTHRHPFDQPEA EQELADGYHIEYAGMKWGMFFVGEYIGIVLVSALLATLFFGGWHGPFLDTLPWLSFFY FAAKTGFFIMLFILIRASLPRPRYDQVMAFSWKVCLPLTLINLLVTGALVLAAAQ" misc_feature 2990435..2991409 /gene="nuoH" /locus_tag="PA2643" /note="NADH-quinone oxidoreductase subunit NuoH; Region: PRK06076" /db_xref="CDD:235692" gene 2991442..2991990 /gene="nuoI" /locus_tag="PA2644" /db_xref="GeneID:882353" CDS 2991442..2991990 /gene="nuoI" /locus_tag="PA2644" /EC_number="1.6.5.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit I" /protein_id="NP_251334.1" /db_xref="GeneID:882353" /translation="MIKEIINVVHGTFTQLRSLVMIFGHAFRKRDTLQYPEEPVYLPP RYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETEDGRWYPEFFRINFSRCI FCGLCEEACPTTAIQLTPDFEMGEFKRQDLVYEKHDLLISGPGKNPDYNYYRVAGMAI AGKPKGAAQNEAEPINVKSLLP" misc_feature 2991487..2991909 /gene="nuoI" /locus_tag="PA2644" /note="NADH-quinone oxidoreductase subunit NuoI; Region: PRK05888" /db_xref="CDD:235637" gene 2992002..2992502 /gene="nuoJ" /locus_tag="PA2645" /db_xref="GeneID:882354" CDS 2992002..2992502 /gene="nuoJ" /locus_tag="PA2645" /EC_number="1.6.5.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit J" /protein_id="NP_251335.1" /db_xref="GeneID:882354" /translation="MEFAFYFAAGVAVLATLRVITNSNPVHALLYLIISLLAISMTFF SLGAPFAGALEIIVYAGAIMVLFVFVVMMLNLGPAVVEQERKWLTPGIWVGPSALALV LLVELLVVLARTPSGAGIGHTTVDAKAVGISLYGPYLLVVELASMLLLAALVAAYHLG RQDAKQ" misc_feature 2992002..>2992430 /gene="nuoJ" /locus_tag="PA2645" /note="NADH-quinone oxidoreductase subunit J; Region: PRK06638" /db_xref="CDD:235844" gene 2992548..2992856 /gene="nuoK" /locus_tag="PA2646" /db_xref="GeneID:882355" CDS 2992548..2992856 /gene="nuoK" /locus_tag="PA2646" /EC_number="1.6.5.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit K" /protein_id="NP_251336.1" /db_xref="GeneID:882355" /translation="MNAIPLEHGLALASVLFALGLVGLMVRRNILFVLMSLEVMMNAA ALAFVVAGSRWGQPDGQVMFILVLSLAAAEASIGLAILLQLYRRFHTLDIDAASEMRG " misc_feature 2992557..2992853 /gene="nuoK" /locus_tag="PA2646" /note="NADH-quinone oxidoreductase subunit NuoK; Region: PRK05715" /db_xref="CDD:180218" gene 2992853..2994700 /gene="nuoL" /locus_tag="PA2647" /db_xref="GeneID:882356" CDS 2992853..2994700 /gene="nuoL" /locus_tag="PA2647" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit L" /protein_id="NP_251337.1" /db_xref="GeneID:882356" /translation="MNLLPLTFLFPLVGFLLLSFSRGRWSENLSALVGVGSVGLSALS AAWAIFSFHSSPPEGGAYSLVLWQWMAAGDFSTNFTLYLDGLSVTMLGVVTGVGFLIH LFASWYMRGETGYSRFFAYTNLFIASMLFLVLGDNLLFLYFGWEGVGLCSYLLIGFYY SNRNNGNAALKAFIVTRVGDVFMAFGLFILFQQFGTLNIQELLVLAPQKFPEGNLWLT LATLALLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARCHGLFT LAPDILELVGIVGAVTLVLAGFAALVQTDIKRILAYSTMSQIGYMFLALGVGAWDAAI FHLMTHAFFKALLFLASGAVIVACHHEQNIFKMGGLWKKLPLAYASFVVGGAALAALP FLTAGFYSKDEILWEAFASGHRELLIAGLVGAFLTSIYTFRLIFVAFHGEPKTEAHAG HGISHWLPLSVLIVLSTFVGALITPPLAGVLPESVGHAGGEAKHSLELASGAIAIAGI LLAALLFLGQRRFVSALAKSAPGRFFGTWWYHAWGFDWLYDKLFVKPYLLLCQLLGRD PIDRTLGVVPFSVRGGHNLLSLTENGRLRWYAASLVGGAAILLGALLLA" misc_feature 2992889..2994658 /gene="nuoL" /locus_tag="PA2647" /note="NADH:ubiquinone oxidoreductase subunit L; Reviewed; Region: PRK06590" /db_xref="CDD:235836" gene 2994728..2996257 /gene="nuoM" /locus_tag="PA2648" /db_xref="GeneID:882357" CDS 2994728..2996257 /gene="nuoM" /locus_tag="PA2648" /EC_number="1.6.5.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit M" /protein_id="NP_251338.1" /db_xref="GeneID:882357" /translation="MILPWLILIPFIGGFLCWIAEHSSKTLPRWIALLSMTLVLILSL WIWATGDFQLAPAPGGEPEWTLQFKVLWIERLGISIHLAMDGLSLLMVALTGLLGVLS VLCSWNEIQRRIGFFHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGH SSDDGKKTRIYAATKFFIFTQASGLVMLVAILGLVFVNFNATGVITFDYATLLKTQLS PHVEWLLMLGFFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRF ALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYS GSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLF FASASLGLPGTGNFVGEFLILIGAFKVVPVIIVIATFGLVFASVYSLIMIHRAYFGPS QSDEPILGLDARELSMVLGLAVLLVLLGVYPQPVLDISAASMHGVQQWLGAALSTLAG R" misc_feature 2994728..2996248 /gene="nuoM" /locus_tag="PA2648" /note="NADH:ubiquinone oxidoreductase subunit M; Reviewed; Region: PRK05846" /db_xref="CDD:235622" gene 2996265..2997725 /gene="nuoN" /locus_tag="PA2649" /db_xref="GeneID:882358" CDS 2996265..2997725 /gene="nuoN" /locus_tag="PA2649" /EC_number="1.6.5.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase subunit N" /protein_id="NP_251339.1" /db_xref="GeneID:882358" /translation="MTFTIQHFIALLPLLITSATLVVVMLAVAWKRNHSFTATLSVIG LNLALLSLLPVLGVTPIEVTPLVLVDNYACFYMALVLVSALACVTLAHAYMESYPGNR EELYLLLLLATAGGLVLVSAQHLASLFIGLELLSVPVYGMVAYAFFNKRSLEAGIKYT VLSAAGSAFLLFGMALLYAESGTLGFAGLGAKVAEHVLSGPLVSVGVGMMLVGLGFKL SLVPFHLWTPDVYEGAPAPVSAFLATASKVAVFAVLLRLFQIAPAALDNQLLNISLSV IAVASILFGNLLALTQSNIKRLLGYSSIAHLGYLLVALIASKGMAVEAVGVYLATYVL TSLGAFGVITLMSTPYSGRDADALFEYRGLFWRRPVLTAVMTVMMLSLAGIPLTAGFI GKFYVIAVGVESHLWWLIGALVLGSAIGLYYYLRVMVTLFLVEPGIRQHDAPFNWGQR AGGIMLVAIALLAFFLGVYPQPLLEILQHSGLALAG" misc_feature 2996277..2997704 /gene="nuoN" /locus_tag="PA2649" /note="NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; Region: NuoN; COG1007" /db_xref="CDD:440631" gene 2997840..2998649 /locus_tag="PA2650" /db_xref="GeneID:882359" CDS 2997840..2998649 /locus_tag="PA2650" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251340.1" /db_xref="GeneID:882359" /translation="MPTFHEIDVLRHNSASWDAQAARDCEWSRPVSAEEVAAARRGDW AVKLTPGALPAHWLGDVRGREILCLASAGGQQAPILAAAGARVTLFDASAGQLDKDRQ VAARDRLELACVQGDMRDLSTFADASFDLVFNPISNLYVDDVLPVWRECARVLRPGGK LLASFYNPALFIEDRSPELAEQGLIRPRHRLPYSDLESLSAEALAAKREKGEALVFGH SLTQQIAGQLAAGLLLQDFYEDWQPHPRFVIDRFVPTFLATCALKPRSAAG" misc_feature 2998008..2998343 /locus_tag="PA2650" /note="Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Region: UbiE; COG2226" /db_xref="CDD:441828" gene complement(2998856..2999914) /locus_tag="PA2651" /db_xref="GeneID:882360" CDS complement(2998856..2999914) /locus_tag="PA2651" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251341.1" /db_xref="GeneID:882360" /translation="MLDTKLESRTFLLLLAVVTLAFGWLLLPFYGAVFWGTILAIIFA PVQRRLQVRLRDRKNLAALITLLICVLIVIIPVIFIAGSLVQEGASVYQRVKSGELNF AAYLQQAVAALPPSVHQWLERFDLANLSSLQEKLSSVAMQASQVVATKAFSIGQNTLD FVISFGIMLYLLFFLLRDGRVLGRRIKQAVPLSQEHKHHLFAKFTTVIRATVKGNIAV AATQGALGGLIFWLLGIEGALLWGTLMAFLSLLPAIGAALIWAPVAAYFLLTGAIWQG VVLILFCVVVIGLVDNILRPILVGKDTKMPDYVVLISTLGGMALFGLNGFVIGPLIAA LFMASWDLFTGREEEPQA" misc_feature complement(2998859..2999851) /locus_tag="PA2651" /note="Predicted PurR-regulated permease PerM [General function prediction only]; Region: PerM; COG0628" /db_xref="CDD:440393" gene complement(3000074..3001759) /locus_tag="PA2652" /db_xref="GeneID:882361" CDS complement(3000074..3001759) /locus_tag="PA2652" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="NP_251342.1" /db_xref="GeneID:882361" /translation="MMRLTLKSKVLLLAMVPVLLFALVLSGGAVLILKKQADAEVKDT RERLLGDRRAELEHYVQIAMGSIQAEYDRSANGDLNARAEAIARLSKIKYGKDGYIFG YDSQVVRLFRGDSPVDVGKSFRDRRDPSGVYLNRELVEAGRNGSHYVTYTSPLPGNES VMVPKLSYTLYLPKWDMVIGSAINLDGVEAQLVEIKQDIDERIGTLIASIVGIAGVLL VVLLVIGLAVANAMLRPLHQIRQNLDDIAAGEGDLTRRLPVTSYDELGELAGSFNRFV EKIHGLVRQIAGMTGDLKQLVEQMSAQAERSEQAMERQRHETDQVATAINEMSAAAHE VAQSAQRAAEAAQQTDHEGQAAKRVVDGSIERIHALVDEIRDSGTSLDSLQQDVQSIV SVLGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTQEIQGM IDRLQQGTNAAVDAMRRSGEAGEGTSNQANQAGDSLDAIAQLIATINAMNAQIASAAE EQTAVAEEINRSVHQIAGAVDSVADEAQQGAQTARSLAQLGQGLGRLVGQFRI" misc_feature complement(3001172..3001609) /locus_tag="PA2652" /note="Single Cache domain 2; Region: sCache_2; pfam17200" /db_xref="CDD:435780" misc_feature complement(3000077..>3001237) /locus_tag="PA2652" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene complement(3001873..3003198) /locus_tag="PA2653" /db_xref="GeneID:882362" CDS complement(3001873..3003198) /locus_tag="PA2653" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_251343.1" /db_xref="GeneID:882362" /translation="MNAVVLAVGLMLVLSLCRVHVVLALIIGAVVGGLFGGLGLEGTL KAFNGGLGGGATVALSYAMLGAFAVAIARSGVAHALADKVLALLGRHDEQGKGAGAFK WILVGLLLCVAVSSQNILPIHIAFIPLLVPPLLYVLSKLQIDRRLIACVITFGLITPY MFLPVGFGNIFLNEILLANVARNGVDVSGINVTHAMFIPALGMLAGLLIAVLFSYRRK RVYDLQRIEQAERVDVSYNPKSLAVAGVSIVAAFVAQLWLDSMIIGALVGFVVFSLSG VVRWKETDDLFTEGMKMMATIGFIMIAAAGFAEVMKATGEVQSLVDASVAWIGNSKAV GAMLMLLVGLLVTMGIGSSFSTVPIIAAIFVPLAVQLGFSPLAIVSIVGTAGALGDAG SPASDSTLGPTSGLNVDGQHNHIWDTVVPTFLHYNLPLLVFGWAAAMLL" misc_feature complement(3001876..3003198) /locus_tag="PA2653" /note="Predicted histidine transporter YuiF, NhaC family [Amino acid transport and metabolism]; Region: YuiF; COG2056" /db_xref="CDD:441659" gene 3003457..3005601 /locus_tag="PA2654" /db_xref="GeneID:882363" CDS 3003457..3005601 /locus_tag="PA2654" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_251344.1" /db_xref="GeneID:882363" /translation="MFLRRLSIQWKITLLAGLCLLGVVALLVGLSVYRMQHSSVLVKS ASTQMLDESARLRLEARGELQALRIQRYFMDAFQYGKGFSRQILFLRDQAQKRFLDAY DLREDLTRQVRTALAANPEVLGLYVVFEPNALDGKDELFVDQPALGSNDKGRFSLYWA QATPGQLESESMIESELADTSSGPSGAAYNAWYTCPKESGQPCVLDPYFDKVGERQLL MTSIAFPLELDGKVIGVMGLDINLSNLQALSEQGNRELYDGVGQVGILSPAGLFAGNS RDAGLLGKNLAKADPQHAGELLQLLAAGKSRLFNENDDLKVLQPLQPIPGAKPWGVLL EVPKSALLGPALALERQLDDMRREGTWVELGLGLGAAVLGLLVLWLSARGVTRPILGV AHMLRDIASGEGDLTQRLPHTGRDELGELAGWFNRFLDKLQPIIRDVKVSVRDARSTA DQSAAISSQTSAGMQQQFREIDQVATASHEMTATAQDVARSAAQAADAARGADQATRD GLALIDRTTQSIDSLAANLTSAMGQVEQLASSSEEIGSVLEVIRAIAEQTNLLALNAA IEAARAGDAGRGFAVVADEVRNLARRTQDSVEQIRGVIEGLQQGTRDVVDAMHGSHRQ AQGSVEQVDEAVAALQRIGEAVTVINDMNLQIASAAEEQSSVAEEINRNVAAIRDVTE SLSSQAEESAQVSQSLNRLANHQQGLMEQFKA" misc_feature 3003724..3004182 /locus_tag="PA2654" /note="first PDC (PhoQ/DcuS/CitA) domain of methyl-accepting chemotaxis proteins and similar domains; Region: PDC1_MCP_like; cd12913" /db_xref="CDD:350338" misc_feature 3004102..3005595 /locus_tag="PA2654" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene complement(3005606..3005914) /locus_tag="PA2655" /db_xref="GeneID:882364" CDS complement(3005606..3005914) /locus_tag="PA2655" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251345.1" /db_xref="GeneID:882364" /translation="MKRRTSTGRWRWALMLPVLVFLLGESSGQREEGRSPRLPAQARY EQAVENALRSERGEPRQAGTAAAKVAEAGAPARLRGWLRSLARLAIWGTYGPPALFRP " gene complement(3006005..3007342) /locus_tag="PA2656" /db_xref="GeneID:882365" CDS complement(3006005..3007342) /locus_tag="PA2656" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_251346.1" /db_xref="GeneID:882365" /translation="MRSIQRRLSVGLFAVLLVVGLVLAQTGLWLFDQGLRRYFAGNLR EEAENLLVAMVRGPNGMQLDEQRLNPAFQRPYSGRYFVIELEKDTWRSRSLWDSELEV PHKKGLVQGLVDGPEEQRLLVFRGHYKRMGQKLRIVVAQDYTPILESFARVQWMGLGA GALALLLVLLLQRLTVRRSLRPLEEVRLQIAQLQQGQRSQLDNQAPEELEPLVEQINH LLAHTEETLKRSRNALGNLGHALKTPLAVLVSLAEREEMARQPELQQVLREQLEQIQQ RLGRELGKARLVGEALPGAHFDCAEELPSLCDTLRLIHGPHLQVSWSAPPGLRLPWDR EDLLEMLGNLLDNACKWADSEVRLTVAQGEGMVRLKVDDDGPGILPDQRQAVLERGTR LDEQVSGHGLGLGIARDIAEACGGRLSLEDSPLGGLRVSVELPLQKSGRAARA" misc_feature complement(3006032..3006940) /locus_tag="PA2656" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: BaeS; COG0642" /db_xref="CDD:440407" misc_feature complement(3006041..3006442) /locus_tag="PA2656" /note="Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG; Region: HATPase_PhoQ-like; cd16954" /db_xref="CDD:340430" misc_feature complement(order(3006053..3006055,3006059..3006064, 3006077..3006079,3006083..3006085,3006131..3006145, 3006152..3006154,3006167..3006169,3006185..3006187, 3006209..3006214,3006218..3006220,3006224..3006226, 3006230..3006232,3006290..3006295,3006302..3006304, 3006314..3006316)) /locus_tag="PA2656" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:340430" misc_feature complement(order(3006131..3006133,3006182..3006184)) /locus_tag="PA2656" /note="ATP-lid; other site" /db_xref="CDD:340430" gene complement(3007339..3008010) /locus_tag="PA2657" /db_xref="GeneID:882366" CDS complement(3007339..3008010) /locus_tag="PA2657" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_251347.1" /db_xref="GeneID:882366" /translation="MRLLLVEDHVPLADELMASLTRQGYAVDWLADGRDAAVQGASEP YDLIILDLGLPGRPGLEILQEWRGLGLATPVLILTARGSWAERIDGLKAGADDYLTKP FHPEELALRIQALLRRAHGLANQSQLEAAGLRLDEQRQCVCLNGADVDLTAAEFRLLR YFMLHPGQVLSKGHLAEHLYDGETERDSNVIEVHVNHLRRKLGREVIETRRGQGYRYA GVAAG" misc_feature complement(3007384..3008010) /locus_tag="PA2657" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" gene complement(3008010..3008324) /locus_tag="PA2658" /db_xref="GeneID:882367" CDS complement(3008010..3008324) /locus_tag="PA2658" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251348.1" /db_xref="GeneID:882367" /translation="MKWLMRYAGIVALVLAVISLEAMARDLDQDEVLRLRQDGVIQPL ESLMQEALGRYPGARLLEVELEEEDDVYVYEVELLTRDGVVRELELDARNGRILKDEE DD" misc_feature complement(3008013..3008210) /locus_tag="PA2658" /note="PepSY domain containing protein, regulator of zincin peptidase activity [Posttranslational modification, protein turnover, chaperones]; Region: YkoI; COG3212" /db_xref="CDD:442445" gene complement(3008324..3008632) /locus_tag="PA2659" /db_xref="GeneID:882368" CDS complement(3008324..3008632) /locus_tag="PA2659" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251349.1" /db_xref="GeneID:882368" /translation="MKKLTALFAATAIALTAGLAQARDLGPDEALKLRDAGTIKSFEE LNKNAIAKHPGSSVHDTELEEEYGRYIYQVELRDPQGVKWDLELDAATGAVLKDHQDD " misc_feature complement(3008327..3008524) /locus_tag="PA2659" /note="PepSY domain containing protein, regulator of zincin peptidase activity [Posttranslational modification, protein turnover, chaperones]; Region: YkoI; COG3212" /db_xref="CDD:442445" gene 3008847..3009929 /locus_tag="PA2660" /db_xref="GeneID:882369" CDS 3008847..3009929 /locus_tag="PA2660" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251350.1" /db_xref="GeneID:882369" /translation="MPAIQIKSPALTLKAGRRALARIRERGLQPADVGIVPGAAGGPK ALGIQGLDLAIFGEWLPRAPRERSLIGASIGSWRFASACLPDAVAGLTRLGELYTRQR FPKGVSIAEVSRKCAAMLDDLLAGQDARILDNPLYRLNVVVVKSHGRLAHDHKASLGL GLSSVIRDNLIGRRHLHRHFERVILHDARQAPPLAALTDFPSRYLHLDGGNLRQALLA SGSIPMVMEGVRDLPGAGPGTYRDGGLLDYHLDLPYEDRGVVLYPHFTDKVIPGWFDK GLPWRRGDAGRLQDVLLLAPSREYLARLPHAKLPDRKDFTRYLGDDDGRERYWRQAMA ESRRLGDEFLELVDGGRLGERLQALD" misc_feature <3009291..3009761 /locus_tag="PA2660" /note="Patatins and Phospholipases; Region: Patatin_and_cPLA2; cl11396" /db_xref="CDD:416256" gene 3009956..3010849 /locus_tag="PA2661" /db_xref="GeneID:882370" CDS 3009956..3010849 /locus_tag="PA2661" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251351.1" /db_xref="GeneID:882370" /translation="MKLAVALIHGIGDQPDSRDEDGLHSYARELVAALRRRLGAEAGE VAFQSLYWASVLDARELAYLKRIEREPLGWRWLRRAVTLFLGDASGYRKVSAAYDTTY QQVHQHVRSGIMALRAKVGPQTPLVILAHSLGGHIVSNFIWDQQKLNRTPSCSIDPFL GLETLAGLVTFGCNIPLFTFAYEKVCPIRFPGHCLPPAIRQQARWLNVYAPADPLGYP LRPLQNYAAVVHEDLALPVGPWYKRHTPLSHMEYWNDARFHDYLADYLRRLLAAGLEP AGAGRALPAGEPGDRPLAELC" gene complement(3011100..3012293) /locus_tag="PA2662" /db_xref="GeneID:882371" CDS complement(3011100..3012293) /locus_tag="PA2662" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251352.1" /db_xref="GeneID:882371" /translation="MQVLDRSRLMAIPPIWRLGFRPFFLGGALFAVLAIALWLAALAG LWSGWQPVGGWLAWHRHEMLFGFGVAIIAGFLLTAVQTWTGVPGLQGKPLALLAGLWL AARLAWLFDAPLALLLVLQLSFLPLLAWAIGRSLWRVRQKRNYPVVGLLLLLTLADAL VLLGLFEGNDDWQRRASIAALWLIAGMMNLIGGRVIPFFTQRGLGRQQQVPAIAWLDN GILLGCVLVALLTAAGVTTQPTPWLAGLFAALGGAQLWRLWRWRDRGIWQVPLLWSLH LAYFWIAVAPLGMALWSLGLALAPSQALHALAVGGMGGLILAMLARVTLGHTGRALQP PAAMPWAFALLNLGCAARVFLPSLLPANWALPLAGGLWALAFLLFAWFYAPMLCRPRV DGHPG" misc_feature complement(3011103..3012275) /locus_tag="PA2662" /note="Nitric oxide response protein NnrS [Signal transduction mechanisms]; Region: NnrS; COG3213" /db_xref="CDD:442446" gene complement(3012280..3012537) /gene="ppyR" /locus_tag="PA2663" /db_xref="GeneID:882372" CDS complement(3012280..3012537) /gene="ppyR" /locus_tag="PA2663" /experiment="'DESCRIPTION:Gene expression, mutation analysis[PMID:18157527]'" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="psl and pyoverdine operon regulator PpyR" /protein_id="NP_251353.1" /db_xref="GeneID:882372" /translation="MNALFDCPRRVLRIGHGLLAAGLALLVAGVIAAYFLDRYLNMPA LVFSHALVILGPTLLKIGYVMRLSALFRMRRPGWEVCCASA" gene complement(3012592..3013773) /gene="fhp" /locus_tag="PA2664" /db_xref="GeneID:882373" CDS complement(3012592..3013773) /gene="fhp" /locus_tag="PA2664" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flavohemoprotein" /protein_id="NP_251354.1" /db_xref="GeneID:882373" /translation="MLSNAQRALIKATVPLLETGGEALITHFYRTMLGEYPEVRPLFN QAHQASGDQPRALANGVLMYARHIDQLQELGPLVAKVVNKHVSLQVLPEHYPIVGTCL LRAIREVLGEQIATDEVLEAWGAAYQQLADLLIEAEESVYAASAQADGGWRGVRRFRV ARKQAESEEITSFYLEPVDGQPLLAFQPGQYIGLRLDIDGEEVRRNYSLSAASNGREY RISVKREAGGRVSNYLHDRVAEGDELDLFPPAGDFVLRDSDKPLVLITAGVGITPALA MLQEALPQARPIRFIHCARHGGVHAFRDWIEDVSAQHEQVEHFFCYSEPRAGDSADAE GLLSREKLADWLPQERDLDAYFLGPRPFMAQVKRHLADLGVPSQQCHYEFFGPAAALD A" misc_feature complement(3012598..3013773) /gene="fhp" /locus_tag="PA2664" /note="NO-inducible flavohemoprotein; Region: PRK13289" /db_xref="CDD:237337" gene 3013928..3015481 /locus_tag="PA2665" /db_xref="GeneID:882374" CDS 3013928..3015481 /locus_tag="PA2665" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="anaerobic nitric oxide reductase transcriptional regulator" /protein_id="NP_251355.1" /db_xref="GeneID:882374" /translation="MTTNPLLATLIPLVADLSRDLPEDERYRRLLQALRDLLPCDATA LLRLDGEYLIPLAVDGLSPDTLGRRFRVGEHPRLEALLERRGPTRFPADCGLPDPYDG LVEGLHGHLEIHDCLGCPLYLDDQPWGLLTLDTLDPSRFASADLDTLEAFASLAAATV KASERMRDLTRRAEDEHQRAEAYLEAAGERPREMIGQSAAHKALLEEIRLVANSDLSV LITGETGVGKELVAQSIHRHSMRSGKPMISLNCAALPETLVESELFGHVRGAFSGAVN ERRGKFELADGGSLFLDEVGELPLAVQAKLLRVLQSGQLQRVGSDREHRVDVRLIAAT NRDLAEEVRAGRFRADLYHRLSVYPLRVPPLRERGRDILLLAGYFLEENRPRLGLRSL RLDHEAQAALLDYRWPGNVRELEHLVGRASLKALGHNPERSRIVTLHRQDLDLPAETP APPRSVVEPAPAAPTTGHSLRAATDAYQRRLIQDCLARHQGSWASAARELGLDRANLA RLARRLQLR" misc_feature 3013940..3015478 /locus_tag="PA2665" /note="nitric oxide reductase transcriptional regulator NorR; Region: PRK05022" /db_xref="CDD:235331" gene 3015582..3015938 /locus_tag="PA2666" /db_xref="GeneID:882375" CDS 3015582..3015938 /locus_tag="PA2666" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="6-carboxytetrahydropterin synthase QueD" /protein_id="NP_251356.1" /db_xref="GeneID:882375" /translation="MELFKEFTFESAHRLPHVPEGHKCGRLHGHSFRVAIHIEGEVDP HTGWIRDFAEIKAIFKPIYEQLDHNYLNDIPGLENPTSENLCRWIWQQLKPLLPELSK VRVHETCTSGCEYRGD" misc_feature 3015582..3015935 /locus_tag="PA2666" /note="6-pyruvoyl-tetrahydropterin synthase [Coenzyme transport and metabolism]; Region: QueD; COG0720" /db_xref="CDD:440484" gene 3016246..3016599 /locus_tag="PA2667" /db_xref="GeneID:882376" CDS 3016246..3016599 /locus_tag="PA2667" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251357.1" /db_xref="GeneID:882376" /translation="MSKLAEFREAERKLQEQLALLEKLKSDSSLKQELEFKDKLQALM DKYGMTLHNIIAILDPKAPVTVSAAPQRRARALKVYKNPNNGEVVETKGGNHKVLKAW KEQYGSETVESWLQR" misc_feature 3016285..3016560 /locus_tag="PA2667" /note="H-NS histone family; Region: Histone_HNS; pfam00816" /db_xref="CDD:425884" misc_feature 3016468..3016593 /locus_tag="PA2667" /note="DNA-binding domain of the bacterial xenogeneic silencer MvaT; Region: MvaT_DBD; cd16170" /db_xref="CDD:320084" misc_feature order(3016468..3016473,3016477..3016479,3016483..3016485, 3016516..3016530,3016534..3016536,3016540..3016545, 3016552..3016554,3016579..3016581) /locus_tag="PA2667" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:320084" gene complement(3016675..3016970) /locus_tag="PA2668" /pseudogene="unknown" /db_xref="GeneID:882377" gene complement(3017234..3017818) /locus_tag="PA2669" /db_xref="GeneID:882378" CDS complement(3017234..3017818) /locus_tag="PA2669" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251359.1" /db_xref="GeneID:882378" /translation="MSDFQRSLQFQGRNLQRQWQEKPLLRMAIWSLCLLLVVHLVMLS MDWREERGEEYRRLAGEWLKLQDVSRQTAWPERAMQAEQVLNLQRERFWQAPNASQAR ADVQAWLTERVRLAGVPDAEVSVLLPRGFEKQGTIARIEAQVRGQLQPASFSRLLQDI EAEQRQVSVEFLELNNMLSPMLNLQLSFLFVAAY" gene complement(3017818..3018804) /locus_tag="PA2670" /db_xref="GeneID:882379" CDS complement(3017818..3018804) /locus_tag="PA2670" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251360.1" /db_xref="GeneID:882379" /translation="MARRAPAQWIVDRAWCVYRCLDLNHVPRSDRYQALALKLAALAP FRRAGHYVAWRGGHALVWFWDEEVREAVAEDCVDQPRRYRCIPESLLQAPPRSIAEGE TVRLLRVRSGLDLQVWRDDCLVLSHFFPSPPQPEQWVRLLRGLAGIRIPESLVAEPGE SLGRPWAVPAAEATLLRWERWLPHGLIATLLLGCGFNLGEGLSWWWAERALRTQYDQL SGQVSPILSARNQALQTNRMATELGRALQHRSQVALLGQVAELLPKDSRLLAWRYRGS ELELRIGTDSVDPRLYVRRFMESGSFEDVRVEPSQSEGLSLSLVLRTPGEGA" gene complement(3018848..3019927) /locus_tag="PA2671" /db_xref="GeneID:882380" CDS complement(3018848..3019927) /locus_tag="PA2671" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251361.1" /db_xref="GeneID:882380" /translation="MISDGARRHAASARSSGFVLVGVVWFLAIMTLLASAAVLWVGRS LDATENRRKVLLRELEEHALLARVQWLVATQRYTVAGLSVPGNAGAAPSKVDMDTSIL PIGGELPLDGREFCMANGWCVALLDRSARLSLSGIDPRVLSRLLAGLGVPAEQVQVMV AQWFSYLYPGAAPRLGSAAQASDRSSPGQARRRPLRSVMEVFRLEAWRPWEAHLLDAG WRDLVAADEAALNINTADARILSLAWGLPEDAVGRLLQARWQRPFTRMSDLHDVLGGH ARLVPEDGWARLASPVLSIRLYPPGAEQGTEYEVRFNSEHRLLPPWQLLSKRSVKIND RYSNPPLHPDIAPGVLAAPLVARPW" misc_feature complement(3019076..3019903) /locus_tag="PA2671" /note="Type II secretory pathway, component PulK [Intracellular trafficking, secretion, and vesicular transport]; Region: PulK; COG3156" /db_xref="CDD:442390" gene complement(3019917..3020507) /locus_tag="PA2672" /db_xref="GeneID:882381" CDS complement(3019917..3020507) /locus_tag="PA2672" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="type II secretion system protein" /protein_id="NP_251362.1" /db_xref="GeneID:882381" /translation="MIRSRRKQGAFTLLEMIVVLLVVSFIGTLLMQGLSYASKANQSL HQNLGRGQVRALTFDWFRDAVENLVAPEAGEVRWRLRGDELSFEAMSAAALDRRAGIP TPLAFRLERRAGEDRTELIYVRRLEDSRWPLLHLRGEARFRYLDGHGQWHRDWPPSAQ LADTLPEAMALAAPEERLFVLVAVALPRARPAEHDF" misc_feature complement(3020175..3020507) /locus_tag="PA2672" /note="Type II secretory pathway, PulJ/GspJ component [Intracellular trafficking, secretion, and vesicular transport]; Region: PulJ; COG4795" /db_xref="CDD:443823" gene complement(3020504..3020929) /locus_tag="PA2673" /db_xref="GeneID:882382" CDS complement(3020504..3020929) /locus_tag="PA2673" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="type II secretion system protein" /protein_id="NP_251363.1" /db_xref="GeneID:882382" /translation="MPARQEGFTLLEAVVALTLLAVVGGALFAWLNSAFRSMQRVEAA ELRIETARVAMAYLERMNPALEPAGRVRLGHYRLEWRSSPLSASKAAVGRHSGSPGIY DVTLFRVVANIRAGDGTPQTLQLELPGYVVIPARLGDGP" misc_feature complement(<3020750..3020929) /locus_tag="PA2673" /note="Type II secretory pathway, PulJ/GspJ component [Intracellular trafficking, secretion, and vesicular transport]; Region: PulJ; COG4795" /db_xref="CDD:443823" gene complement(3020929..3021339) /locus_tag="PA2674" /db_xref="GeneID:882383" CDS complement(3020929..3021339) /locus_tag="PA2674" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="type II secretion system protein" /protein_id="NP_251364.1" /db_xref="GeneID:882383" /translation="MPMSVTRPNVDQAAFTLLELLVVLVIVGAIAAVALPGLVRMQET WARRTALDDLFNQLQTLGYRVRSDGRELLIDESGAVPEQLLRLPDGWTVTARPPIHYM ANGVCLGGKLQVHHGRATHTLLLQPPLCAPGTIR" gene complement(3021308..3021742) /locus_tag="PA2675" /db_xref="GeneID:882384" CDS complement(3021308..3021742) /locus_tag="PA2675" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="type II secretion system protein" /protein_id="NP_251365.1" /db_xref="GeneID:882384" /translation="MNRAAQQGFTLLEMIVVLVIIGMLMGLVGPRLFNQADKAKAQTA DTQVKMLKGALLTMRLDIGRLPTEEEGLALLNTPPSDERLGAFWHGPYLEGGVPLDPW NRPYLYSDRPSAEQPFTLYSQGADGQPGGKGLDADVGYAPKR" misc_feature complement(3021317..3021724) /locus_tag="PA2675" /note="type II secretion system protein G; Region: typeII_sec_gspG; TIGR01710" /db_xref="CDD:130771" gene complement(3021796..3022983) /locus_tag="PA2676" /db_xref="GeneID:882385" CDS complement(3021796..3022983) /locus_tag="PA2676" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="type II secretion system protein" /protein_id="NP_251366.1" /db_xref="GeneID:882385" /translation="MNFIYQAVDRKGRRVRGELCLPTRQDALRQLQRQGLTPLSLEVK RRNLGSRRRLKAEELNMAIHELATMLAAGVSMADAVEAQERGARHPKLISALQAMANG LRQGQSFPVVLESAGLDLPRYVYQLVAAGEMTGNLAGALRDCATQMEYERRTRAELQG ALIYPAILVLSGVLAVATLFVFVVPKFANLLNETAQLPWLAWAVLSIGVWSNESSGLL AFAVLLLAGGIAVALRNPALRAHALDQLVRLPVVGEWLMQAEIAQWSKVLGTLLGNRV PLVEALALSADGVRIARQRRTLERVTQDVRAGIALSAALEERQAVTSIGSSLVRVGEA SGQLAEMLQSLATLYGEVGQARMKKALVLIEPLAILLIGSVFGLIITGVVLAITSAND MVL" misc_feature complement(3021802..3022983) /locus_tag="PA2676" /note="Type II secretory pathway, component PulF [Cell motility, Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: PulF; COG1459" /db_xref="CDD:441068" gene complement(3022988..3024715) /locus_tag="PA2677" /db_xref="GeneID:882386" CDS complement(3022988..3024715) /locus_tag="PA2677" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="type II secretion protein" /protein_id="NP_251367.1" /db_xref="GeneID:882386" /translation="MSSEAVSPGPQMTAEWIPLGQRLLERGLVSGQELERALDLQRRL GGRLGGILVRSGAISENTLMQVLAEQLRLPLVGDDLRKPSEESIAAFLLSTPINTDWF VEEQLVVWEEGEQLLFAARDPLSPSIRETLGYFYPERSIQAVLCRSQDLDGWLEHSLD LARQGADRHAYGSEDIRYLRELAEEAPVVELVNNVMSQAMEKRSSDIHIEPREFDFRI RFRVDGVLHDQLSLPRERFAAVVSRIKLISAIDIAERRLPQDGRMSIRVSGTELDVRV STLPGVHGESVVMRLLPKEREGLRLDRLGMLPDHLRRMRAWVAEPHGIILVTGPTGSG KSTTLYGALEEINDGVRKLISVEDPVEYQVPNITQVQVHADIGLTFAAALRSILRQDP DVIMIGEIRDLETAEIAVQSSLTGHLVLSTLHTNDAVSAFTRLIDMGVEPFLVASPVR GVQAQRLVRRLCAHCAEPCEPTLAAADLAATEAATARLFPGQAAQWRVARGCGRCEGT GYSGRVGIYELVDLSSEMRDLIVQRASLEQMHRLAASQGQRNLREDGLIKAWLGMTSL DEVHRVTSG" misc_feature complement(3022994..3024685) /locus_tag="PA2677" /note="Type II secretory pathway ATPase GspE/PulE or T4P pilus assembly pathway ATPase PilB [Cell motility, Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: PulE; COG2804" /db_xref="CDD:442055" gene complement(3024705..3025508) /locus_tag="PA2678" /db_xref="GeneID:882387" CDS complement(3024705..3025508) /locus_tag="PA2678" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_251368.1" /db_xref="GeneID:882387" /translation="MSGSLLVPASLASRIRLLLVMTRREVELRYRDAMLGRIWIIVSP FLLLLIYTFVFGFVLKSRWGGSQSTLSFALTLFSGLLLNGILAESLSRAPTIIQANAN YVKKLVFPLEILPLTPLLAAFFNAMLGYLVLCIFLLFSGVEPGWQLVLLPLALLPFLL CVTGLAWFLAGLGVYVRDIGQFVQFLLVLLLFISPVFYPLSSLPPVMQPYLYLNPLTI PVEMVRAILFDAPYPTLGVFSVYCVASLLVCSSGFLWFRRVQEGFADVL" misc_feature complement(3024708..3025484) /locus_tag="PA2678" /note="ABC-type polysaccharide/teichoic acid/polyol phosphate export permease [Carbohydrate transport and metabolism]; Region: TagG; COG1682" /db_xref="CDD:441288" gene complement(3026100..3026852) /locus_tag="PA2679" /db_xref="GeneID:882388" CDS complement(3026100..3026852) /locus_tag="PA2679" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251369.1" /db_xref="GeneID:882388" /translation="MTAPFKDHFSTGSANYAAHRPTYPAQLVDELAALCPGTRLALDC GCGTGQLTVLLAERFERVVGTDASAAQIDKAQARERVEYRVALAEDSGLAAASADLVT VAQAAHWLDLPRFYEEVRRVARADAILALVTYGVLHVDGPMEPLVQHFYHQVVGPYWP AERRHVEEGYRNLPFPFEERRLPDLAIEVAWTLDELLGYVGTWSAVKEAGKALGQDPG AAFVDELREAWGDPQTRYRVSWPLTVRAGVIR" misc_feature complement(3026448..3026828) /locus_tag="PA2679" /note="Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Region: UbiE; COG2226" /db_xref="CDD:441828" gene 3027078..3028052 /locus_tag="PA2680" /db_xref="GeneID:882752" CDS 3027078..3028052 /locus_tag="PA2680" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="quinone oxidoreductase" /protein_id="NP_251370.1" /db_xref="GeneID:882752" /translation="MPSRITLNANGGPEVLRLEQVQAQQPGPGEVWLEQAAIGVNPLD LGQRSGAVPIPLPSGLGLEGAGVVAALGPGVSGLAPGDRVAYATGPLGAYASARLYPA ERLLKLPDTLAFEDAAALLFKGITAHYLLYATYPVGPGTRILLYGAAGAVGQLMAAWA RHLGAWVIGVVSKAESVERARAAGCDEVLVFDAASLAAQVAELTAGRKVDVVYDPIGR ATFEASLNSLRPRGLLVSFGATSGVPPAVEVATLNAKGSLFLTRPSLAAHTANPEEYR LRAQAVLRAHADGVIQPRVWRRYPLAEAAVAHTDLLEGRSQGALVLLP" misc_feature 3027087..3028049 /locus_tag="PA2680" /note="Quinone oxidoreductase (QOR); Region: QOR2; cd05286" /db_xref="CDD:176189" misc_feature order(3027198..3027203,3027213..3027215,3027441..3027443, 3027453..3027455,3027462..3027464,3027516..3027518, 3027525..3027533,3027588..3027593,3027603..3027605, 3027648..3027650,3027720..3027725,3027786..3027800, 3027861..3027872,3028011..3028013,3028017..3028019) /locus_tag="PA2680" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:176189" misc_feature order(3027477..3027479,3027765..3027770,3027807..3027824, 3027846..3027869,3027876..3027881) /locus_tag="PA2680" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:176189" gene 3028075..3029004 /locus_tag="PA2681" /db_xref="GeneID:882753" CDS 3028075..3029004 /locus_tag="PA2681" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251371.1" /db_xref="GeneID:882753" /translation="MQPFDSRQADEVATLLALAEHGSFAAAGRALQRHPSVLSKRLGA LERRLGIRLVERTTRQLRFTDEGERLASRFRQAVDLLDEAEHEASLGAAQLRGRLRIA LPSAMGRLWLGPLLAEFALAHPQVVLETDYSERFVDIIAEGFDLAIRVGELADSRLVA RRLCAHRRILGAAPDYLKRHGVPRIPADLAAHNCLGFSGLHSYPEWKLTRQDEQQPVR VRGSMVSNDNEALLCAARQGLGIFAAGEWLMSRDLEAGRLVRVLPEWKLDADAGVYLV RPSARYATAAASAFRQWVEARFAAGPPWQRQRA" misc_feature 3028102..3028278 /locus_tag="PA2681" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 3028363..3028911 /locus_tag="PA2681" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(3028393..3028395,3028405..3028407,3028522..3028524, 3028564..3028566,3028570..3028572,3028756..3028758, 3028807..3028809,3028891..3028893) /locus_tag="PA2681" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature order(3028396..3028401,3028411..3028416,3028420..3028425, 3028432..3028434,3028444..3028446,3028450..3028470, 3028651..3028653,3028738..3028752,3028771..3028776, 3028783..3028785) /locus_tag="PA2681" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 3029187..3030428 /locus_tag="PA2682" /db_xref="GeneID:882759" CDS 3029187..3030428 /locus_tag="PA2682" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251372.1" /db_xref="GeneID:882759" /translation="MGQYVSIAASDGSGRFDAYLALPASGKGPGVVIGQEIFGVNANM RAVADLYAEEGYVALVPDLFWRLQPGVDLGYDEAAFAKAIELFQRIDLDAAVDDIAAC IEHLRQREEVVHAGIGFVGFCMGGKLAYLAATRTDVSCSVGYYGMGIEALLDEAKQIK GRLVLHFAEQDAYCPQQARDAILPCLRNLPKTELYLYPGVDHAFARVGGMHFDKPAYL MAHERSIAALKREIGPNFDLSALWDEHVRHEFDTRDVAATMATMVAEPYVNHVPTLTG GVGQRELSRFYRHHFIHGNPPDMTLTPISRTVGALQVVDEFVMRFTHSCEIDWLLPGV PPTGRFVEIPMLGVVRFRGDRLYHEHIYWDQAGVLVQIGLLDPQGLPVAGVESARKLL DESLPSNRLMARWAASEGLGL" misc_feature 3029187..3029873 /locus_tag="PA2682" /note="Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism]; Region: DLH; COG0412" /db_xref="CDD:440181" misc_feature 3029916..3030317 /locus_tag="PA2682" /note="Predicted ester cyclase [General function prediction only]; Region: COG5485" /db_xref="CDD:444236" gene complement(3030436..3031398) /locus_tag="PA2683" /db_xref="GeneID:882760" CDS complement(3030436..3031398) /locus_tag="PA2683" /EC_number="4.3.1.19" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="serine/threonine dehydratase" /protein_id="NP_251373.1" /db_xref="GeneID:882760" /translation="MHDLPTYDDVIAAAARIAGHANRTPVMSSRTLDEELGAEVFFKC ENLQRMGAFKFRGAFNALSRFSAEQRAAGVVAFSSGNHAQAIALSARLLGIPATIVMP ADAPAVKIEATRGYGGQVVLYDRYTEDREQIGRDLAQRHGLTLIPPYDHPDVLAGQGT AAKELFEEVGPLDAFFAPLGGGGLLSGCALAIRALAPACRIYGVEPEAGNDGQRSLRS GAIVHIDTPQTLADGAQTQHLGNLTFPLIQRNVDDILTASDAELVDGMRFLAARMKLL VEPTGCLGLAAARQRKDELRGKRVGILLSGGNVDLARFCALLGG" misc_feature complement(3030439..3031398) /locus_tag="PA2683" /note="threo-3-hydroxy-L-aspartate ammonia-lyase; Region: PRK07048" /db_xref="CDD:235918" misc_feature complement(order(3030469..3030480,3030571..3030579, 3030589..3030591,3030598..3030603,3030610..3030612, 3030817..3030822,3031258..3031263,3031354..3031359, 3031366..3031368,3031375..3031380)) /locus_tag="PA2683" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:107205" misc_feature complement(order(3030484..3030486,3030847..3030861, 3031156..3031158,3031237..3031239)) /locus_tag="PA2683" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:107205" misc_feature complement(3031237..3031239) /locus_tag="PA2683" /note="catalytic residue [active]" /db_xref="CDD:107205" gene complement(3031749..3035702) /locus_tag="PA2684" /db_xref="GeneID:879129" CDS complement(3031749..3035702) /locus_tag="PA2684" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251374.1" /db_xref="GeneID:879129" /translation="MSGLPVSHVGEKVSGGVISTGSPTVHVGSSAVGLADRVSACVPL VGKPVNPMLGSKLLPEEVDFALAAPDTFTFARGYLSSNPRIGRLGRGWWLPGESMHLE LSEDACVLVDAQGRRIGFPALAPGAQHYSGSEELWLRRGGSSGGEAQAWRGRWAAVPA ELQTQEGSVLVLSGHSYLHFQRCPDGIWRLQASFGRAGYRTEFRWSGRGLLTGVRDSA GRSYALVYQQACEPSEGDDGLRLFGVILASHDGPPPDYIDPQSPGLDWLVRYQFSDSG DLIAVRDRLGQVVRVFAWREHMLVAHGEPGGLEVRYEWDVHAPHGRVVKQIEAGGLTR TFRYLRDATEVSDSLGRVERYEFAGEGGQRRWTALVRADGSRSEFDYDLFGRLVAMRD PLGRETRRRRDGQGRMLEEESPGKARYRKRVDEETGLLVELEDAMQRRWTFERDERGN ATTVRGPAGSTRYAYEDPRLPDRPTRIVDPRGGERRLEWNRFGLLAALTDCSGQVWRY DYDNEGRLVASSDPLGQLTRRRYDPLGQLIGLELADGSALSYEYDALGRQTRIADAEG HATLFSWGHGDLLARVSDAGGGELSYLHDEAGRLVALTNENGVQAQFRYDLLDRLVEE TGFDGRRQRYRYNAADELIAREDADGRETTYAYDRDGRLASIRVPATEHAPALVERYR WLADGRLASAGGADCEVRYTYDEVGNLRLESQVHADGWVYSVEHSHDALGVRQTSRYG DAPPVAWLTYGPGHLHGALVGAVELAFERDALHREVRRDARRDGQDDALFTQERQHAP LGRLQRSRLRLAGGFDWQRGYRYDGLGQLVGIDDNQYPSVRYEYDLGGRLLASRRAGA AASTYRYDAAGNRLEGVGEHAREDARQAFAENELYRSGFSRSETRASQAGEGPARWAG NRVERIAGNRYRFDALGNLVERIGADGERLRLAYDGAQRLVHLTRDYADGTRLEARYR YDALSRRIAKVVLRDGVEQQVRFGWDGDRQCAEAFARELRTTVHEPGGFVPLLRLEQA CEPDPPELLQLRQAFAAEGQPLPAQCVPALGEARIAFFHTDHLGTPLQLSDERGQLRW QGVPDDWRAVAPERQPGAQPIRFQGQYHDEESGLYYNRYRYYLPEAGRYASQDPLGLG GGPNPYAYALNAPTLAYDPTGLIIPLVVIGAFAARAAIGAALGAGIELGMQTGKQVLG QMKDNWDSDRDLTDIKWKCIDINWKHVGASAAIGTVAPGMLSTGKTVVQSAKAIRTLS GQAANTANRAAKLAARKAAHADTIKKAVATQAAWQTGKQIVKCPLKDEEEECPPQ" misc_feature complement(3032199..3035702) /locus_tag="PA2684" /note="RHS element core protein; Region: RHS_core; NF041261" /db_xref="CDD:469161" gene complement(3035752..3037932) /locus_tag="PA2685" /db_xref="GeneID:879130" CDS complement(3035752..3037932) /locus_tag="PA2685" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251375.1" /db_xref="GeneID:879130" /translation="MAIGQPFATALGCTIIWRAAGALFGPPAAGDYQGRFPMLFSQHT RLVHVDSPLGPEVLQLQRLEGREELGRLFSHELELVSSNPALPLDALLGKPMSLALEL PGGSRRYFHGIVARCSQGAGAGQFASYQVTLRPWLWLLTRTSDCRIFQNQKVPDIIKQ VFRDLGFSDFEDALSRSYREWEYCVQYRETSFDFVSRLMEQEGIYYWFRHEKKRHILV LSDAYGAHHSPAGYTSVPYYPPSLGHRERDHFFDWHMAREVQPGSLSLNDYDFQRPGT RLEVRSNVGRAHAAADYPLYDYPGEYVQSQDGEHYARTRIEAIQTQYERVRLRGCARG IGAGHLFHLSNYPRLDQNREYLVVGAEYRVVQELYETGNGGGGAQFESELDCIDAGQA FRPLPSTPVPVVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDRHDQSNENSSCWMRV SQAWAGKNWGSIQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYELPANATQSG TKSRSSKGGTPANFNEIRMEDKKGAEQLFIHAERNQDIEVENDESHWVGHDRTKTIDH DETVHVKHDRTETVDNNETITVHANRSKTVDRNETVRIGMNKTETILMASLQNVGMGR MENVGLGYSLNVGMMMNTVVGLNQSTQVMKKKTLSVGDSYEVSVGGSDDGSKITLDGQ SITLGSQRIELTADREILLRCGQSTIRLTPGEIEILSPNVDINC" misc_feature complement(3036250..3037791) /locus_tag="PA2685" /note="type VI secretion system Vgr family protein; Region: VI_Rhs_Vgr; TIGR03361" /db_xref="CDD:274542" misc_feature complement(3035872..>3036321) /locus_tag="PA2685" /note="baseplate hub subunit and tail lysozyme; Provisional; Region: 5; PHA02596" /db_xref="CDD:222900" misc_feature complement(3036166..3036237) /locus_tag="PA2685" /note="Gp5 C-terminal repeat (3 copies); Region: Gp5_C; pfam06715" /db_xref="CDD:310962" misc_feature complement(3035773..>3035889) /locus_tag="PA2685" /note="Uncharacterized protein conserved in bacteria (DUF2345); Region: DUF2345; pfam10106" /db_xref="CDD:431059" gene 3037886..3038803 /gene="pfeR" /locus_tag="PA2686" /db_xref="GeneID:882764" CDS 3037886..3038803 /gene="pfeR" /locus_tag="PA2686" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component response regulator PfeR" /protein_id="NP_251376.1" /db_xref="GeneID:882764" /translation="MIVQPSAVAKGWPIATTLLPASCGPADPKPEPKPKQRRLCRKVF PLRARCGALAHCPIPGKNEIFTNVNHSHISIPSPRLLLVEDDPRLREDLDAHFRRRGF RVTVCGDGSHGLEAAGREAFDLVLLDIMLPGLDGLALLESLRREQATPVMLMSALGAE QDRISGFTRGADDYLPKPFSLAELDARTDALLRRVRLDRLPLAQRRDTRLVFDDQAQD VLHQGLPAGLTPSEYRLLATLREHAGEALSKPFLYRSVLHRSYTRLDRGLDVHVCNLR RKLAVVAVRHLQIQAVRGQGYLLVETEHP" misc_feature 3038114..3038725 /gene="pfeR" /locus_tag="PA2686" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" protein_bind complement(3037916..3037928) /locus_tag="PA2685" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2685" /bound_moiety="AmrZ" protein_bind 3038081..3038099 /gene="pfeR" /locus_tag="PA2686" /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /note="Transcription factor binding site for NP_253452." /bound_moiety="Fur" gene 3038803..3040143 /gene="pfeS" /locus_tag="PA2687" /db_xref="GeneID:882765" CDS 3038803..3040143 /gene="pfeS" /locus_tag="PA2687" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component sensor histidine kinase PfeS" /protein_id="NP_251377.1" /db_xref="GeneID:882765" /translation="MRRHPLLWKLALLQVGFCLLLTWLIYTWGLSVERSTYFLAPADR HYLADYARQAEDAWRREGAAGAERFRKELSAKEDTWVALVGPHLESLGSTPLSAEESS HLTFMRKLDWPMSRRLQDELPYVSIEFPGHPEQGRLVIQLPERLLPGGLTPWTHLVTH GIVPTLLAALLGLLLYRHLVVPLNRLRDRADALRADELESTPLAAPLAARRDELGELA QALEHMAERLRLSLAQQRLLLRTLSHELRTPLARLRIAHDSELPPEQLRQRLDREIGD MQRLLEDTLDLAWMDTERPQLPTEPVLALSVWEALRDDACFESGWDPARLPCRLGVDC RVEVHLDSLAQAMENLLRNAIRHSPEDGTVSLDGEREGDFWHLRLQDQGPGVAEDQLE RIFLPYQRLDDSAGEGFGLGLAIARRAIELQGGRLWASNGKPGLCLHLWLPAAA" misc_feature 3038914..3039246 /gene="pfeS" /locus_tag="PA2687" /note="Sensor domain of 2-component histidine kinase; Region: HK_sensor; pfam16750" /db_xref="CDD:435558" misc_feature 3039331..3039501 /gene="pfeS" /locus_tag="PA2687" /note="HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain; Region: HAMP; smart00304" /db_xref="CDD:197640" misc_feature 3039460..3040140 /gene="pfeS" /locus_tag="PA2687" /note="K+-sensing histidine kinase KdpD [Signal transduction mechanisms]; Region: KdpD; COG2205" /db_xref="CDD:441807" protein_bind complement(3040141..3040153) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 3040242..3042482 /gene="pfeA" /locus_tag="PA2688" /db_xref="GeneID:882784" CDS 3040242..3042482 /gene="pfeA" /locus_tag="PA2688" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="ferric enterobactin receptor" /protein_id="NP_251378.1" /db_xref="GeneID:882784" /translation="MSSRALPAVPFLLLSSCLLANAVHAAGQGDGSVIELGEQTVVAT AQEETKQAPGVSIITAEDIAKRPPSNDLSQIIRTMPGVNLTGNSSSGQRGNNRQIDIR GMGPENTLILVDGKPVSSRNSVRYGWRGERDSRGDTNWVPADQVERIEVIRGPAAARY GNGAAGGVVNIITKQAGAETHGNLSVYSNFPQHKAEGASERMSFGLNGPLTENLSYRV YGNIAKTDSDDWDINAGHESNRTGKQAGTLPAGREGVRNKDIDGLLSWRLTPEQTLEF EAGFSRQGNIYTGDTQNTNSNNYVKQMLGHETNRMYRETYSVTHRGEWDFGSSLAYLQ YEKTRNSRINEGLAGGTEGIFDPNNAGFYTATLRDLTAHGEVNLPLHLGYEQTLTLGS EWTEQKLDDPSSNTQNTEEGGSIPGLAGKNRSSSSSARIFSLFAEDNIELMPGTMLTP GLRWDHHDIVGDNWSPSLNLSHALTERVTLKAGIARAYKAPNLYQLNPDYLLYSRGQG CYGQSTSCYLRGNDGLKAETSVNKELGIEYSHDGLVAGLTYFRNDYKNKIESGLSPVD HASGGKGDYANAAIYQWENVPKAVVEGLEGTLTLPLADGLKWSNNLTYMLQSKNKETG DVLSVTPRYTLNSMLDWQATDDLSLQATVTWYGKQKPKKYDYHGDRVTGSANDQLSPY AIAGLGGTYRLSKNLSLGAGVDNLFDKRLFRAGNAQGVVGIDGAGAATYNEPGRTFYT SLTASF" misc_feature 3040242..3042479 /gene="pfeA" /locus_tag="PA2688" /note="FepA family TonB-dependent siderophore receptor; Region: PRK13524" /db_xref="CDD:237410" gene 3042502..3043416 /locus_tag="PA2689" /db_xref="GeneID:882785" CDS 3042502..3043416 /locus_tag="PA2689" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251379.1" /db_xref="GeneID:882785" /translation="MRTSLLVAALGLALAAALPGGAPLAQPDPEATMDRSLLQRQDLP YRFSAVDLDSVDGQRHYRLWLGRPLQAPPAAGYPVVWMLDGNAAVGALDESTLRRLAD GDAPLLVAIGYRTPLRIDRAGRTFDYTPASPGQADQRDPLNGLPSGGADAFLDLLRDG MRPAVAAQAPLDTARQTLWGHSYGGLLVLHALFTRPGEFARYAAASPSLWWRDGAILG ERAGLEQRLRGKRAELLLWRGSAEPASPRGSLKAEPGQAMARLVDDLRRVAGLTLDFQ PLDGLGHGETLGASLRLLLARPAVERQR" misc_feature 3042649..3043377 /locus_tag="PA2689" /note="Predicted hydrolase of the alpha/beta superfamily [General function prediction only]; Region: YbbA; COG2819" /db_xref="CDD:442067" gene complement(3043750..3044766) /locus_tag="PA2690" /db_xref="GeneID:882896" CDS complement(3043750..3044766) /locus_tag="PA2690" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_251380.1" /db_xref="GeneID:882896" /translation="MNLSRIGLDLAKQVFQVHGVDRHEHVVCRRQLKRAQVRDFFRQL PPCLVAMEACGSAHYWARELRELGHTVRLIAPQFVKPYVKGDKHDAHDAEAICEAASR PSMRYVPVKSAEQQAVQSMHRVRSRLVRARTALCNEVRGLLGEFGLIATRRGRAATMA LLETVMATEPAPLPAPMGELLRELKDELQTLEARIARLERQIQAHVRGDARIQRLLAV EGIGPISASAVAASAGDARQFRTGRQFAAWLGLVPRQHSTGGQQRLGNISKRGDTYLR TLLIHGARAVVRCCANKTDARSRWLQGLLQRRPANVVAVALANKNARILWALLSRETC YRPG" misc_feature complement(3043768..3044751) /locus_tag="PA2690" /note="IS110 family transposase; Region: transpos_IS110; NF033542" /db_xref="CDD:468073" gene complement(3044947..3046152) /locus_tag="PA2691" /db_xref="GeneID:882897" CDS complement(3044947..3046152) /locus_tag="PA2691" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251381.1" /db_xref="GeneID:882897" /translation="MKQRILIVGAGFAGMWSALSAVRQLDRQGRDDVEVAVLAPQPEL RIRPRFYEPDVQRMAAPLGELFAAVGVRFVQGSAQRIDVAGKRVEYRDAEGTLAQLDY DRLVLAAGSGVWRPASVAGIDAAFDVDQLEDALRLEAHLHALRDLPDSPARNTVVVAG GGFTGIETATEMPARLRAILGEKAALRVIVVDRGAAIGASMGADLSGLIAEASAELGV EWCLGRSVAAVDAEGVTLDDGQRIEAKTVVWTVGVRASTLTGQIPGERDAQGRLHVDR NLKVLGLDDVYATGDVARAATDDLGNHALMTCQHAIALGRSAGNNVAADLLGVEPIPY SQVKYVTCLDLGGWGAVFTEGWDRQVRFVREEGKKIKTEINGVWIYPPAADRAVALAA ADPLIPVVA" misc_feature complement(3045094..3046149) /locus_tag="PA2691" /note="NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; Region: Ndh; COG1252" /db_xref="CDD:440864" gene 3046421..3046945 /locus_tag="PA2692" /db_xref="GeneID:882825" CDS 3046421..3046945 /locus_tag="PA2692" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251382.1" /db_xref="GeneID:882825" /translation="MALYSAGVEYGIHCLLFLADEKGDSRESSVRTLAELQGVPPELL AKVFTRLAKAGLVAATEGVRGGFRLARPANEISVLDVVRAIDGDKSIFECREVRERCA IFEGNPPSWATRNTCSIHAVMLTAQKRMEEALAQQTILDLVRRVGRIAPPEFGEEVLR WMDASREGRGGSRD" misc_feature 3046433..3046882 /locus_tag="PA2692" /note="DNA-binding transcriptional regulator, IscR family [Transcription]; Region: IscR; COG1959" /db_xref="CDD:441562" gene 3047116..3047616 /locus_tag="PA2693" /db_xref="GeneID:882826" CDS 3047116..3047616 /locus_tag="PA2693" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="acyl-CoA thioesterase" /protein_id="NP_251383.1" /db_xref="GeneID:882826" /translation="MEPGSYQLTMSVLMTPDKANFSGNVHGGALLKLLDEVAFACAKR YAGRYVVTLSVDQVIFREPIHVGELVTFLASVNYTGRTSMEVGVKVMTENIHERTVRH TNSCFFTMVAMDDQRRPVAVRPLEPETAIEKRRYAQALARREQRKLMELRYQEIREQV DHAMPA" misc_feature 3047134..3047556 /locus_tag="PA2693" /note="Acyl-CoA hydrolase [Lipid transport and metabolism]; Region: YciA; COG1607" /db_xref="CDD:441215" gene complement(3047644..3047970) /locus_tag="PA2694" /db_xref="GeneID:882710" CDS complement(3047644..3047970) /locus_tag="PA2694" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="NP_251384.1" /db_xref="GeneID:882710" /translation="MKTRYSAEAPARDELDRLAGPTLVEFGTDWCGHCQAAQPLLAEV FSDYPEVGHLKVEDGPGRRLGRSFQVKLWPTFVFLRDGREVARVVRPGSASVLEEAFE SLVGEG" misc_feature complement(3047665..3047934) /locus_tag="PA2694" /note="TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox...; Region: TRX_family; cd02947" /db_xref="CDD:239245" misc_feature complement(order(3047869..3047871,3047878..3047880)) /locus_tag="PA2694" /note="catalytic residues [active]" /db_xref="CDD:239245" gene complement(3048051..3049154) /locus_tag="PA2695" /db_xref="GeneID:882711" CDS complement(3048051..3049154) /locus_tag="PA2695" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251385.1" /db_xref="GeneID:882711" /translation="MKAVRQGRGVTGLLMLLALAGCSSRSAEPPPPNPDEVRAKIVRL MPATVRDRQGWASDIYAAFSAQQIYPSDENLCAVLAVTEQESTYQVDPPVAGLGRIAT REVERRAGKLHVPAFLVSSALNIKSPDGRTYSQRLAAARTEKELSETFDDFIAIVPMG GKLFGGFNPVHTGGPMQVSIAFAEQHADGYPYPLDGSIRREVFSRRGGMYFGIAHLLG YPADYPAPLYRFADFNAGWYASRNAAFQSAVSRVSGIPLALDGDLIRYGTRTPGSTEL AVRSLGKRLDMSDAAIRRALEQGDSPEFADSALYRKVFALAESATGKTLPRAVLPGIT LESPKITRKLTTAWFAKRVDERYQRCMARVRKR" misc_feature complement(3048066..3049013) /locus_tag="PA2695" /note="Protein of unknown function (DUF1615); Region: DUF1615; pfam07759" /db_xref="CDD:429641" gene complement(3049268..3050161) /locus_tag="PA2696" /db_xref="GeneID:882690" CDS complement(3049268..3050161) /locus_tag="PA2696" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251386.1" /db_xref="GeneID:882690" /translation="MTVAIDRTKGDQSTPGNIIRGEGYALIRNSEATPDPDKVIHIPC ADSFSVIVQLRDFNSHRLWNGNKLVFDGGHPRKSISIAYLGDEIKCQHRTTYDNVRFM LPRASIKEFLYEEGQRASAEPERIIGVDDPVVYHLALALLPSFARAGERNELFIEQVM LALLTHVQDRFASTQVPVCTGKGLAPWQLRRAKELIAGHLAEGVSVARLAEECGLSRS YFTKAFKCSTGVSPHEWLMRMRVDRAKELMLGSDEPLSQIGVACGFSDQPHFSRIFLR LAGASPSTWRRVKRQRTDAAL" misc_feature complement(3049301..>3049597) /locus_tag="PA2696" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene complement(3050331..3050612) /locus_tag="PA2697" /db_xref="GeneID:882691" CDS complement(3050331..3050612) /locus_tag="PA2697" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251387.1" /db_xref="GeneID:882691" /translation="MKLYVFSLGAGLLVGIVYSLLQVRSPAPPLVALVGLLGILLGEQ VIPVGKQLLGGCAFASACDKAGSVGHVLGQLPGRHRLDQAAGPSEQEKG" misc_feature complement(3050358..3050609) /locus_tag="PA2697" /note="Protein of unknown function (DUF1427); Region: DUF1427; pfam07235" /db_xref="CDD:399901" gene complement(3050669..3051349) /locus_tag="PA2698" /db_xref="GeneID:882622" CDS complement(3050669..3051349) /locus_tag="PA2698" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_251388.1" /db_xref="GeneID:882622" /translation="MSHYLEVLTPQNSQIIFIDQQPQMAFGVQSIDRQTLKNNVVGLA KAAKVFDIPVTITTVETDSFSGPTYPELLAVFPEQKILERTSMNSWDDQNVRDSLAAA GRKKVVVAGLWTEVCNTTFALCAMLEGGYEIYMVADASGGTSSDAHKYAMDRMVQAGV VPVTWQQVLLEWQRDWARRDTYDAVMAIAKEHSGAYGMGVDYAYTMVHKAPERVTHGE RIGPNPAK" misc_feature complement(3050828..3051307) /locus_tag="PA2698" /note="YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them; Region: YcaC_related; cd01012" /db_xref="CDD:238494" misc_feature complement(order(3050999..3051001,3051098..3051100, 3051293..3051295)) /locus_tag="PA2698" /note="catalytic triad [active]" /db_xref="CDD:238494" misc_feature complement(order(3051137..3051139,3051275..3051277, 3051284..3051286)) /locus_tag="PA2698" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238494" misc_feature complement(3051011..3051016) /locus_tag="PA2698" /note="conserved cis-peptide bond [active]" /db_xref="CDD:238494" gene 3051957..3053795 /locus_tag="PA2699" /db_xref="GeneID:882623" CDS 3051957..3053795 /locus_tag="PA2699" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251389.1" /db_xref="GeneID:882623" /translation="MTADLILHNGRFHTVDRDNPTATAVAIKDGKFLAVGNDAEAMLH RGSATQVIDLQKRTVIPGLNDSHLHLIRGGLNYNLELRWEGVPSLADALRMLNNQAER TPSPQWVRVVGGWNEFQFAEKRMPTLEELNKAAPDTPVFVLHLYDRALLNRAALRVVG YTKDTPNPPGGEIVRDSSGEPTGMLIARPNAMILYATLAKGPKLPLEYQVNSTRQFMR ELNRLGLTSAIDAGGGFQNYPDDYQVIRELADQGQLTVRIAYNLFTQKPKEELADFKN WTGSVKYGQGSDFFRHNGAGEMLVFSAADFEDFLEPRPDLPQTMEQELEPVVRHLVEQ RWPFRLHATYDESISRMLDVFEKVDRDIPFNGLPWFFDHAETITPRNIERVRALGGGI AIQDRMAFQGEYFVDRYGAKAAEATPPIQRMLAEGVPVGAGTDATRVSSYNPWTSLYW LVSGRTVGGMALYPQGLPRETALQLFTHGSAWFSSEQGKKGQIKVGQLADLAALSADF FGVEEEAIKWIESVLTVVDGKVVYAAAEFDKLGPPAPPVLPDWSPVAKVPGHWRQGAP LTAQVHQCVGACAVHAHEHNRARHSNVPVSDFQGFWGAFGCSCFAF" misc_feature 3052026..3053462 /locus_tag="PA2699" /note="YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for phytochrome A signalling; Region: YtcJ_like; cd01300" /db_xref="CDD:238625" misc_feature order(3052155..3052157,3052161..3052163,3052977..3052979, 3053073..3053075,3053259..3053261) /locus_tag="PA2699" /note="active site" /db_xref="CDD:238625" gene 3053844..3055151 /gene="opdB" /locus_tag="PA2700" /db_xref="GeneID:879077" CDS 3053844..3055151 /gene="opdB" /locus_tag="PA2700" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="OpdB proline porin" /protein_id="NP_251390.1" /db_xref="GeneID:879077" /translation="MIRVRPVGRLALFLALGGTSPCHAATEEAKAPDYLEWRLLNRNY FLYNDYRRADAGRGYRKEWAHGLIVDLESAYTPGRVGFGLDLHGFAGFKLDGGRGHAG TGLLPLDSSGDNASEYSDAGAALKLRLGESLLKVGEMTVETPVFDTSDKRLQPQYARG FFLQSDDLDRVRIQAGRFTAFKEQASSSGHGDFDGYGASTAGSAIGFAGASLAASDNL SGSLFAAQLDNVWRQVYLNMNLQRAAFSLDGNLYRTRDQGRSRAGAIDTLAYSLQLKY RVGAQGFSLAYQRVHGDTPFDFVGGDSIYLANSIKYADFNGPGERSWQARYDLDLAPF GLPGLSFMARYVSGRAIDGSHAPAGGAYNPLGADGRYRPLQGSGGKHWERDLDLRYLF ASGPFKDLSLNVSHLSHRANAAQAGDDIDRLYLIVEYPLKGSL" misc_feature 3053949..3055139 /gene="opdB" /locus_tag="PA2700" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene 3055154..3056743 /locus_tag="PA2701" /db_xref="GeneID:879078" CDS 3055154..3056743 /locus_tag="PA2701" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_251391.1" /db_xref="GeneID:879078" /translation="MTAPAASPWSPLRQTTFRWLWLASIASNIGTWMHEVGAGWLMTS LSASPLNVALVQVAGSLPMFFLALPAGALADIVDKRRYLLGVQLWMALVATLLASLTL LQLTSVWLLLGLTLCMGIGTALMMPAWSATTPELVGKDELPAAVALSSVGVNLARAVG PAIAGVLVSLVGPWLTFALNALSFFAVIAVLLAWKREAVPSVLPAERLFGALRAGWRY SRSSRPLQSVLVRAVAFFLGASAGMSLLPLIVRGELHGNAMDFGLLLGSVGVGAVLGA AFLPRLRERLGSDRLVLLSSVLYALVLVALALLRNLYLLVPVMLLSGAAWIAVLSSLQ VAAQTSVPAWVRARALAVYILVFFGSMAAGGALWGLVASHLSITFALLCASAALLLGL FASLRCRLPVTEAEDLAPSLHWPAPLVDEEVDQERGPVMVTLEYDIDPQDAAAFQAAM VEVRAMRRRNGAVSWGLVQDSGNRRLWLEFFIDESWLEHLRHHQRVTRGELRVEAAAR RFQSAGVEVRIRHYLHGAARP" misc_feature 3055169..3056740 /locus_tag="PA2701" /note="Transmembrane secretion effector; Region: MFS_3; pfam05977" /db_xref="CDD:399164" misc_feature order(3055232..3055237,3055244..3055249,3055256..3055258, 3055352..3055354,3055517..3055522,3055526..3055534, 3055541..3055543,3055601..3055603,3055610..3055615, 3055622..3055624,3055847..3055849,3055856..3055861, 3055868..3055876,3055883..3055885,3055955..3055957, 3055967..3055969,3056126..3056131,3056141..3056143, 3056153..3056155,3056201..3056203,3056210..3056215, 3056222..3056227,3056234..3056236) /locus_tag="PA2701" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340863" gene 3056890..3057366 /locus_tag="PA2702" /db_xref="GeneID:880323" CDS 3056890..3057366 /locus_tag="PA2702" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251392.1" /db_xref="GeneID:880323" /translation="MSYDYEKTSLTLYRAVFKANYDGDVGRYLHPDKELAEAAEVAPL LHPTFDSPNTPGVPARAPDIVAGRDGLYAPDTGGTSVFDRAGVLRRADGDFVIPDGTD IPPDLKVKQDSYNKRLQATHYTIMPAKPMYREVLMGQLDNFVRNAIRRQWEKARGL" misc_feature 3056908..3057345 /locus_tag="PA2702" /note="Tse2 ADP-ribosyltransferase toxins; Region: ADPRTs_Tse2; pfam18648" /db_xref="CDD:408430" gene 3057376..3057609 /locus_tag="PA2703" /db_xref="GeneID:880324" CDS 3057376..3057609 /locus_tag="PA2703" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251393.1" /db_xref="GeneID:880324" /translation="MNLKPQTLMVAIQCVAARTRELDAQLQNDDPQNAAELEQLLVGY DLAADDLKNAYEQALGQYSGLPPYDRLIEEPAS" misc_feature 3057379..3057594 /locus_tag="PA2703" /note="Tse2 immunity protein Tsi2 and similar proteins; Region: Tsi2_like; cd11690" /db_xref="CDD:212589" misc_feature order(3057382..3057387,3057394..3057396,3057403..3057405, 3057415..3057420,3057424..3057429,3057436..3057438, 3057505..3057507,3057514..3057516,3057523..3057528, 3057535..3057537) /locus_tag="PA2703" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:212589" gene complement(3057902..3058921) /locus_tag="PA2704" /db_xref="GeneID:882796" CDS complement(3057902..3058921) /locus_tag="PA2704" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251394.1" /db_xref="GeneID:882796" /translation="MIDSTFSRATWLNSLHMSTLTLSLLEKEGFAREQLLEGSGITPA DLLDLRRLISPWQEQQVFANACRLSDEPALGLRLGLRTRISAYGLLGYALLSAPTLGE ALRIGLSYPVLLGTYFHLSLEVADGRAWLVATGYGEDEALRPFNTELCLGSLKVTCAD LLGQPLPLLEAAFDYAGDEAMARAYAEGFACELHFERERSAIGFAAEWLERPLPLADP VTHREMLEQCRRQNIDLAARRAWLDKVRAILAERLQDPPGLEELARRLNCSSRSLRRH LQQQRTSYQQLLDELRFARAKELLQSGDMPIYRIAEELGFSETASLRHAFQRWSGQPP SHFRA" misc_feature complement(3058283..3058837) /locus_tag="PA2704" /note="Arabinose-binding domain of AraC transcription regulator, N-term; Region: Arabinose_bd; pfam12625" /db_xref="CDD:432679" misc_feature complement(3057905..3058618) /locus_tag="PA2704" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" gene complement(3059035..3060216) /locus_tag="PA2705" /db_xref="GeneID:882797" CDS complement(3059035..3060216) /locus_tag="PA2705" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251395.1" /db_xref="GeneID:882797" /translation="MLLNLFNEMRAAKVPVSVRELLDLIDALKHRVVFADMDEFYYLA RTIMVKDERHFDKFDRAFGAYFKGLEKLDDHLKALIPEEWLRKEFERLLTDEEKAQIQ SLGGLDKLIEEFKKRLEEQKERHAGGNKWIGTGGTSPFGSGGFNPEGIRVGDAGKRQG KAAKVWDQREYKNLDDQVELGTRNIKIALRRLRKFAREGAAEELDIDGTIDHTAKDAG LLNIQMRPERRNTVKLLLLLDIGGSMDAHVKVCEELFSACKTEFKHLEYFYFHNFIYE SVWKNNLRRSSERTATFDLLHKYGPDYKVVFVGDAAMAPYEITQAGGSVEHWNEEAGY VWMQRFMEKYKKLIWINPYPKDTWNYTASTGLVRELVKEQMYPLTLSGLEEGMRFLSR G" misc_feature complement(3059041..3060216) /locus_tag="PA2705" /note="Uncharacterized CoxE-like protein, contains von Willebrand factor type A (vWA) domain [Function unknown]; Region: CoxE2; COG3825" /db_xref="CDD:443037" gene complement(3060265..3060660) /locus_tag="PA2706" /db_xref="GeneID:882656" CDS complement(3060265..3060660) /locus_tag="PA2706" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251396.1" /db_xref="GeneID:882656" /translation="MLSGSCLCGAVSYEIDAPIESASHCHCSQCRKAHGAAFATYGKV RREAFRYVAGADAVAEYHSSPGVTRTFCRHCGSNLQWLGGNEDPTYTSIALGTLDSPL PSVAQRHIYVGSKADWYVIADDLPQEHQY" misc_feature complement(3060280..3060660) /locus_tag="PA2706" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3791" /db_xref="CDD:443005" gene complement(3060725..3061570) /locus_tag="PA2707" /db_xref="GeneID:882657" CDS complement(3060725..3061570) /locus_tag="PA2707" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251397.1" /db_xref="GeneID:882657" /translation="MKFEGTQSYVATDDLKLAVNAAITLQRPLLVKGEPGTGKTMLAE QLAESFGAKLITWHIKSTTKAHQGLYEYDAVSRLRDSQLGVDKVHDVRNYIKKGKLWE AFEAEERVILLIDEIDKADIEFPNDLLQELDKMEFYVYETNETIKAKQRPIIIITSNN EKELPDAFLRRCFFHYIAFPDRETLQKIVDVHYPNIKQSLVSEALDIFFDVRKVPGLK KKPSTSELVDWLKLLMADEIGEAVLRERDPTKAIPPLAGALVKNEQDVQLLERLAFMS RRASR" misc_feature complement(3060785..3061567) /locus_tag="PA2707" /note="MoxR-like ATPase [General function prediction only]; Region: MoxR; COG0714" /db_xref="CDD:440478" gene complement(3061733..3062818) /locus_tag="PA2708" /db_xref="GeneID:882612" CDS complement(3061733..3062818) /locus_tag="PA2708" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251398.1" /db_xref="GeneID:882612" /translation="MKKRYAIPLGSLAALLLLLLALHLALPYLVRDYLNGKLADMGDY RGHIADVDLALWRGAYRIDGLSIVKDNGKVPVPFLDAPSIDLSVSWQALWDDHAVVAR VVFERPQLNFVDAGGDRDASQTGAGTDWREQLDKLLPITLNEVRVVDGTLRFRNFTSK PPVNLHASALNASIYNLTNVADARGERPARLEGTARILGQAPLEVAAHFDPLSDFEDF DLRLRVTRVELKRLNDFASAYGKFDFNAGTGDLVLEAQAKRGQLDGYIKPLLRDVDVF NWRQDVEDGDKNLFRSVWEALVGGGETVLKNQRKDQFATRVSLSGNIHQRDVSAFQAF LGILRNAFVEAFNARFERSPATRDDDG" misc_feature complement(<3062030..3062731) /locus_tag="PA2708" /note="Uncharacterized conserved protein AsmA involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis]; Region: AsmA; COG2982" /db_xref="CDD:442221" gene 3062939..3063913 /gene="cysK" /locus_tag="PA2709" /db_xref="GeneID:882613" CDS 3062939..3063913 /gene="cysK" /locus_tag="PA2709" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cysteine synthase A" /protein_id="NP_251399.1" /db_xref="GeneID:882613" /translation="MSRIFADNAQSIGNTPLVQINRIAPRGVTILAKIEGRNPGYSVK CRIGANMIWDAEASGRLKSGMTLVEPTSGNTGIGLAFVAAARGYKLILTMPASMSLER RKVLKALGAELVLTEPAKGMKGAIQKAEELVAGDPGKYFMPQQFDNPANPAIHEKTTG PEIWNDTEGAVDVLVSGVGTGGTLTGVSRYIKNTRGKPILAVAVEPVTSPVISQTLAG EEVKPAPHKIQGIGAGFVPKNLDLSLVDRVEKIGDDEAKNMALRLMQEEGILCGISSG AAMAAAVRLAEEPNMQGKTIVVILPDSGERYLSSMLFDGLFSEQELTQ" misc_feature 3062960..3063877 /gene="cysK" /locus_tag="PA2709" /note="Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan...; Region: Trp-synth-beta_II; cl00342" /db_xref="CDD:444852" misc_feature order(3062987..3062995,3063029..3063031,3063047..3063049, 3063053..3063055,3063179..3063181,3063188..3063190, 3063236..3063241,3063248..3063253,3063260..3063265, 3063431..3063436,3063728..3063736,3063740..3063748, 3063821..3063823,3063851..3063853,3063860..3063862) /gene="cysK" /locus_tag="PA2709" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:107204" misc_feature order(3063068..3063070,3063158..3063160,3063470..3063487, 3063626..3063628,3063758..3063760,3063839..3063844) /gene="cysK" /locus_tag="PA2709" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:107204" misc_feature 3063068..3063070 /gene="cysK" /locus_tag="PA2709" /note="catalytic residue [active]" /db_xref="CDD:107204" gene 3063972..3064586 /locus_tag="PA2710" /db_xref="GeneID:878932" CDS 3063972..3064586 /locus_tag="PA2710" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251400.1" /db_xref="GeneID:878932" /translation="MLETSLFVATLATLGMLSPGPDFFLIIRNAARYQRSAAMMTSLG VILGVATHMAYCVAGLAVLITTTPWLFNALKYTGAVYLIWIGIQALRSRGGGTLDLAV GGVQRVGHWSAFLQGYLCNLLNPKATLFFLAVFTQVLSLDSSFAEKLWYAGIIVGLAV LWWPLLVVLIQSAVVRRSLARAQGVVDKLLGGLLIALGVKVALS" misc_feature 3063972..3064535 /locus_tag="PA2710" /note="Threonine/homoserine/homoserine lactone efflux protein [Amino acid transport and metabolism]; Region: RhtB; COG1280" /db_xref="CDD:440891" gene 3064785..3065876 /locus_tag="PA2711" /db_xref="GeneID:878933" CDS 3064785..3065876 /locus_tag="PA2711" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="spermidine/putrescine-binding protein" /protein_id="NP_251401.1" /db_xref="GeneID:878933" /translation="MKTRIASLTLLALACGSGATLAADNLKIYNWSEYIAPETVANFA KETGIQATYDVYDSNETLDGKLMTGQSGYDVVFPSNHFMAKQIQAGALKKLDKSRLPN WKNLNPVLLKALEVNDPGNQYGFPYLWGTTGIGYNPAKIKAVLGDDAPLDSWDIFFKP EYMQKLSKCGVAVLDNGPELLPITLNYLGLPHHSQKADDYKQAQAALLKVRPYIRYFH SSKYVSDLANGEICMVVGFSGDILQAATRAKEANNGVEVRYSTPKEGSPLWFDMVSMP VDAPDEKAGYAFMNYLLRPEVMAAISNHVHYANGNLAADPLVDAEIKADPAIYPPQEK MAKLFALESMPQKIDRVRTRTWNTVKTGK" misc_feature 3064860..3065852 /locus_tag="PA2711" /note="The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold; Region: PBP2_PotF; cd13659" /db_xref="CDD:270377" misc_feature order(3064875..3064877,3065493..3065495,3065502..3065504, 3065589..3065591,3065595..3065597,3065703..3065705) /locus_tag="PA2711" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270377" misc_feature order(3064908..3064910,3064917..3064922,3065667..3065672) /locus_tag="PA2711" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:270377" gene 3066296..3067159 /locus_tag="PA2712" /db_xref="GeneID:882563" CDS 3066296..3067159 /locus_tag="PA2712" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251402.1" /db_xref="GeneID:882563" /translation="MFALNKSALAGLASTSLFVLLWSSGAIASKWGLAHSSPFAFLVF RFGIALACLLPLAPLLRLRTPRSARERGKALLTGLVMLGIYPIFYIFSLKLQVTPGMM ATILGVQPILTAVILERRQSPARLFGLLLGLAGLVLVVYQGIGLAGMSTAGILCALLA LAGVTGGSIMQKGIRENPLGTLPLQYLAGLGLCLAFVPFQPFEFEWNAGFLVPALWMG VVVSVGATLLLYRLIAQGNLVNVTSLFYLVPAVTAIMDFMVFGNRLGWLSLLGMGLIV VGLMFVFRKAG" misc_feature 3066320..3067153 /locus_tag="PA2712" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene complement(3067207..3067686) /locus_tag="PA2713" /db_xref="GeneID:882564" CDS complement(3067207..3067686) /locus_tag="PA2713" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251403.1" /db_xref="GeneID:882564" /translation="MKWQEVGETPCSMARSLAILGDRWTLLILRNCFLGMRRFDEFQA SLGVTRQVLADRLSRLVEAGALKKVPYQERPPRYEYRLTEMGHDLHPVLLALANWGDR WLDEGRGAPVEYVHKACGHKFRPTMVCPECGEPVGSRDVTAVPGPGFAAMAGKLAQN" misc_feature complement(3067369..3067674) /locus_tag="PA2713" /note="DNA-binding transcriptional regulator, HxlR family [Transcription]; Region: HxlR; COG1733" /db_xref="CDD:441339" misc_feature complement(<3067234..3067350) /locus_tag="PA2713" /note="Zinc ribbon domain; Region: Zn-ribbon_8; cl00993" /db_xref="CDD:470024" gene 3068040..3070349 /locus_tag="PA2714" /db_xref="GeneID:882610" CDS 3068040..3070349 /locus_tag="PA2714" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="molybdopterin oxidoreductase" /protein_id="NP_251404.1" /db_xref="GeneID:882610" /translation="MTTPSPQWKKTACILCSLNCGLEVQTENGRISKIRGDDDHPASQ GYVCEKSQRMDYYQNGADRLDTPMRRRPDGSYEAIDWDTAIREVAEKFLAIKRRHGGE SILYYGGGAQGNHLGGAYGDSTLKALGVKYRSNALAQEKTGEFWVQGKMFGTGVHGDF EHCEGAILIGKNPWQSHGFARARVLLNAMAKDPARSIIVIDPRLSETAALADFHLQIR PGTDAWCLAALVGIIVQDGLLARDWLAEHTSGYEHIVDELNAIPVAYCAETCGVAEDK LRAAARRIASASSVSALEDLGMQMNLHSTLGSYLQRLVWLLTGHYGRPGTSNAFVPFL SLSKASKGDTSMGKRGAPRVEKRSPVANAKIIIGLIPCNVIPEEILTDHPKRYRAMLV ETGNPLHSLADSQRMREAMRALELSVVIDVAMTETARHADYVLPAASQFEKAEATFFN LEFPRNAFHLRAPLFPARPGTLPEAEIHARLLEAMGVLGEKDYRPLRLALKLGRKAFS AAFLAAAATRPKVMKYAPVLLYRTLGPTLPAGMEAAAAIWGICQLHVLNNRKTAARAG FDGLPPLAADRLFQAMLDNPSGVVFAETTYAESWQAVARPEQRINLHIPELLPELAKL AHSAPPHDPAYPFILAAGERRSDTSNTAVRDTGWHRRGRYGTLRISPQDAEALGCADG EVLRVVTRRGEVEAEVEISDMMQPGNISLPNGQGLDYRNAEGEVVRRGVAPNEVTDCT QRDFLAGTPWHKYVPARLERLATPAATNA" misc_feature 3068067..3069911 /locus_tag="PA2714" /note="The MopB_1 CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. These members belong to...; Region: MopB_1; cd02762" /db_xref="CDD:239163" misc_feature order(3068076..3068078,3068085..3068087,3068097..3068099, 3068181..3068183) /locus_tag="PA2714" /note="putative [Fe4-S4] binding site [ion binding]; other site" /db_xref="CDD:239163" misc_feature order(3068187..3068189,3068433..3068435,3068439..3068447, 3068544..3068549,3068553..3068555,3068562..3068567, 3068637..3068645,3068703..3068705,3068922..3068933, 3069036..3069041,3069219..3069227,3069297..3069305, 3069312..3069314,3069348..3069353,3069366..3069368) /locus_tag="PA2714" /note="putative molybdopterin cofactor binding site [chemical binding]; other site" /db_xref="CDD:239163" misc_feature 3069939..3070322 /locus_tag="PA2714" /note="The MopB_CT_1 CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. This CD is of the...; Region: MopB_CT_1; cd02782" /db_xref="CDD:239183" misc_feature order(3069960..3069974,3069978..3069989,3070176..3070178, 3070239..3070241,3070299..3070304) /locus_tag="PA2714" /note="putative molybdopterin cofactor binding site; other site" /db_xref="CDD:239183" gene 3070366..3070704 /locus_tag="PA2715" /db_xref="GeneID:882611" CDS 3070366..3070704 /locus_tag="PA2715" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ferredoxin" /protein_id="NP_251405.1" /db_xref="GeneID:882611" /translation="MTFVVLEECIRCKHTDCVEVCPVDCFYEGPNFLVIHPDECIDCA LCEPECPVAAIRAEDEVPLGQRQFIALNGELAAHPNWTQITRKKPAPDDHDAWFGLPG KLAELDRNGA" misc_feature 3070366..3070560 /locus_tag="PA2715" /note="NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit [Nucleotide transport and metabolism]; Region: PreA; COG1146" /db_xref="CDD:440761" misc_feature 3070561..3070692 /locus_tag="PA2715" /note="Domain of unknown function (DUF3470); Region: DUF3470; pfam11953" /db_xref="CDD:463410" gene complement(3070719..3071954) /locus_tag="PA2716" /db_xref="GeneID:882668" CDS complement(3070719..3071954) /locus_tag="PA2716" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="FMN oxidoreductase" /protein_id="NP_251406.1" /db_xref="GeneID:882668" /translation="MNLFDTLTLPNGSTIPNRLAKAAMEENMADAAQAPSERLMRLYQ AWADGGAGLLISGNVMVDSRAMTGPGGVVLEDDAQLEKFRRWARIGRSAGAQFWLQIN HPGRQMQANLGQQAWAPSAVPLELGGMSRHFATPKAMDEAMIAEVIQRFARSAGLAER AGFSGVEIHAAHGYLLSQFLSPLSNRRSDAWGGSLENRARLLLEIVRAVRAEVAPGFA VAVKLNSADFQRGGFSADDAREVVRMLDGLGVDLVELSGGSYEAPAMQGEARDGRTLA REAYFVEFARDIRAAARMPVMVTGGIRRRPVAEQVLASGVDMVGIGTALAIEPNLPRD WRAGKDSAPQLRPITWRNKPLASLANMAAVKFQLRKLSRGRATNPRVSPLCALLAQQA GALLQTRRYRRLMRSRAEA" misc_feature complement(3070941..3071948) /locus_tag="PA2716" /note="Old yellow enzyme (OYE)-related FMN binding domain, group 2. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as...; Region: OYE_like_2_FMN; cd04733" /db_xref="CDD:240084" misc_feature complement(order(3070986..3070991,3071277..3071279, 3071433..3071435,3071655..3071657,3071781..3071783, 3071880..3071882,3071886..3071888)) /locus_tag="PA2716" /note="putative active site [active]" /db_xref="CDD:240084" misc_feature complement(order(3070986..3070991,3071277..3071279, 3071655..3071657,3071781..3071783,3071880..3071882, 3071886..3071888)) /locus_tag="PA2716" /note="putative FMN binding site [chemical binding]; other site" /db_xref="CDD:240084" misc_feature complement(order(3071433..3071435,3071439..3071441)) /locus_tag="PA2716" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:240084" misc_feature complement(3071433..3071435) /locus_tag="PA2716" /note="putative catalytic residue [active]" /db_xref="CDD:240084" gene complement(3072081..3072911) /gene="cpo" /locus_tag="PA2717" /db_xref="GeneID:882669" CDS complement(3072081..3072911) /gene="cpo" /locus_tag="PA2717" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="chloroperoxidase" /protein_id="NP_251407.1" /db_xref="GeneID:882669" /translation="MGYVTTKDGVELFYKDWGPRDAQVIYFHHGWPLSSDDWDAQMLF FLAEGFRVVAHDRRGHGRSSQVWDGHDMDHYADDVAAVVERLGVRGAIHVGHSTGGGE VVHYIARYPDDPVPKAAIISAVPPLMVKTEGNPGGLPKSVFDDLQAQLAANRAQFYQD IPAGPFYGYNRPGAQPSEGIVRNWWRQGMMGGAKAHYDGIVAFSQTDFSDDLKRIDIP VLVMHGDDDQIVPYENSGVLSAKLLRNGTLKTYPGFPHGMPTTQAEVINADLLAFIRG " misc_feature complement(3072084..3072911) /gene="cpo" /locus_tag="PA2717" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene 3073144..3073632 /locus_tag="PA2718" /db_xref="GeneID:882714" CDS 3073144..3073632 /locus_tag="PA2718" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251408.1" /db_xref="GeneID:882714" /translation="MKIGELAKLTGLATSRIRFYEASGLIRSQRKANGYRDYAADTVW ILELVTGAQGAGFSLEEIARLLPSGDGAWQHDELLEGLRRKVAEIEALQRRLEQNKAQ LLVAIESIENKPDGLQCTENTQRVLERLREEGPPQTVGRPRQTRSRGASSTPAEQRLS DA" misc_feature 3073144..3073533 /locus_tag="PA2718" /note="Helix-Turn-Helix DNA binding domain of transcription regulators from the MerR superfamily; Region: HTH_MerR-SF; cl02600" /db_xref="CDD:470628" misc_feature order(3073147..3073155,3073195..3073197,3073243..3073251) /locus_tag="PA2718" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133389" gene 3073732..3074418 /locus_tag="PA2719" /db_xref="GeneID:882715" CDS 3073732..3074418 /locus_tag="PA2719" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251409.1" /db_xref="GeneID:882715" /translation="MTKRILHVVTNVAHYADPTQPTGLWLSELTHAYEIFAARGYQQR LVSPRGGESPLEPRALGWPHADASAKAWLADETRLALLADTAAPEQVDAEAFDAIYFT GGHGVMWDFPDDAGLQHLTREIYQRGGIVSSVCHGYCGLLNTRLDDGRLLVAGRRLTG YSWIEEVLAGVARKVPYNVEEEMKRRGALYERSLLPFTSKVVVDGRLVTGQNPQSAKA TAEQVAALLG" misc_feature 3073744..3074412 /locus_tag="PA2719" /note="Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein; Region: GATase1_Hsp31_like; cd03141" /db_xref="CDD:153235" misc_feature order(3074134..3074139,3074227..3074229) /locus_tag="PA2719" /note="potential catalytic triad [active]" /db_xref="CDD:153235" misc_feature 3074134..3074136 /locus_tag="PA2719" /note="conserved cys residue [active]" /db_xref="CDD:153235" gene complement(3074580..3075218) /locus_tag="PA2720" /db_xref="GeneID:878944" CDS complement(3074580..3075218) /locus_tag="PA2720" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251410.1" /db_xref="GeneID:878944" /translation="MEAVSVSQHLAALFESHRIDCVVHGEWVAPAGRLPAIRATWYAG EKTGRLDVDVLLEDERQLQEAFAGIGSAEDGLQDALRNFASNSFHVLLSALWGQAEED QVMVETWEIGERRFEVHIGNLGLRGAEGKAPPLPVGLFPSIERAIRTEPLDARLHWFR HFFCAFGNQRTVEALFDNQPWEAGMQNLAALDWQDSQGYYSVRNFLMLKPLA" misc_feature complement(3074589..3075152) /locus_tag="PA2720" /note="Family of unknown function (DUF6348); Region: DUF6348; pfam19875" /db_xref="CDD:466219" gene 3075411..3075890 /locus_tag="PA2721" /db_xref="GeneID:878945" CDS 3075411..3075890 /locus_tag="PA2721" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251411.1" /db_xref="GeneID:878945" /translation="MNSKNTICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSG KEGDVLTVEFRVMGIPCLGLNGGPAFRHSEAFSFQVATDDQAETDRLWNAIVDNGGEE SACGWCRDKWGISWQITPRVLSEAIASPDRAAARRAFEAMMTMGRIDIATIEKAFKG" misc_feature 3075417..3075884 /locus_tag="PA2721" /note="Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase [General function prediction only]; Region: COG3865" /db_xref="CDD:443074" gene 3075922..3076314 /locus_tag="PA2722" /db_xref="GeneID:882616" CDS 3075922..3076314 /locus_tag="PA2722" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251412.1" /db_xref="GeneID:882616" /translation="MDRFTGGCLCGKVRLVASGRPYRVGLCHCLDCRKHHGALFHASA IFPEEAVSIEGETRDYAGRFFCPQCGSSVFSRSADEIEVSLGALDAPDRFQPTYELWT VRREGWLPAFPLARHYERDREGDGRSEE" misc_feature 3075922..3076284 /locus_tag="PA2722" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3791" /db_xref="CDD:443005" gene 3076344..3076622 /locus_tag="PA2723" /db_xref="GeneID:882617" CDS 3076344..3076622 /locus_tag="PA2723" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251413.1" /db_xref="GeneID:882617" /translation="MDELFEEHLEIAKALFAQRLPYWCDVFLRPADQAFNAYLNARGQ ASTYLVLEGFDPVYVPRGCDLDAVRATARARARLREAGLGEDALPVLL" gene 3076697..3077236 /locus_tag="PA2724" /db_xref="GeneID:882649" CDS 3076697..3077236 /locus_tag="PA2724" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251414.1" /db_xref="GeneID:882649" /translation="MTRPYLLRLAAGLALLLPAACTSPAPPAPNLTALFADALHCRVD FPDGRDRATAERLRAEGVEVLDRAPGETLDLLYRFATPLRIDGSLVNAVRVRGDSGVL VMAYAEGDLEDFARRQGATPHPAERAALDGFGELEVLYSRPLPPRPGLDESPPRLVIG RGIEAAAQAFRWGCRSYDG" gene 3077312..3079195 /locus_tag="PA2725" /db_xref="GeneID:882650" CDS 3077312..3079195 /locus_tag="PA2725" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chaperone" /protein_id="NP_251415.1" /db_xref="GeneID:882650" /translation="MALGAICCGHDTRCERLSMPGTALFEKPRWLRDLLRFLPLKSQF VLSGNIRDLQACEVVPGTVTAQSFNQTLCDALLDAGYAQVLAWDPLAGFRVLGRPGSE AGATPQVLLDLGLTPVDGAAPAGIDLLGATLQRLVNRSGEPIALIVDFASRLAVRNDA LSAAEHQLFTQALVLSHQARSRPAGEQRKPFFNSVLWVVEKEGDLPDWLLVDNPRLRH IPVSKPDQPARRALAPALLRGLGGAGVAEEALQQAAATFVENTEGLLLLDLNAIVQLA RVEGLAMERIADAVRRYKVGVTEDPWLKIDRQRIRQADEIVRRRVKGQQHAVTHMLDI VKRAMTGVGASRKGNRPRGVAFLAGPTGVGKTELAKTVTSLLFGDESAYIRFDMSEFS AEHADQRLIGAPPGYVGYDVGGELTNAIREKPFSVVLFDEIEKAHPRILDKFLQILDD GVLTSGRGDRVYFSEALIVFTSNLGIYRQGENGERVANVLPGEPFEAVQGKVHGEIER YFKLVLNRPEILNRIGENIIVFDFIRADVAEQIFTQMVNGTFADLREQRLVIELAEAP RQALHDLCLGDLSNGGRGIRNQLEARLLNPLSRALFDQDAQPGERFLISALDADGLTL ERR" misc_feature <3078227..3079180 /locus_tag="PA2725" /note="ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]; Region: ClpA; COG0542" /db_xref="CDD:440308" gene 3079197..3079835 /locus_tag="PA2726" /db_xref="GeneID:882575" CDS 3079197..3079835 /locus_tag="PA2726" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="radical activating enzyme" /protein_id="NP_251416.1" /db_xref="GeneID:882575" /translation="MELSLSRVHFPVTTLGPGRRLGIWFQGCSIRCPGCISADTWGPG RRRIALARLLADIQPWLEQAEGITVSGGEPFEQFAALLALLGELRRRSRADILVYSGY PLEHLHAQLEQAAGLIDALISDPYQQHAEQSLALRGSDNQRLSLLTELGRARLGGYQR PLREDDKALDLMFDHDGSVWMAGIPRRDDLLRLQDLLREQGHQLSVSAHRPR" misc_feature 3079242..3079628 /locus_tag="PA2726" /note="4Fe-4S single cluster domain; Region: Fer4_12; pfam13353" /db_xref="CDD:433138" gene 3079850..3086145 /locus_tag="PA2727" /pseudogene="unknown" /db_xref="GeneID:882576" gene 3086142..3087491 /locus_tag="PA2729" /db_xref="GeneID:882570" CDS 3086142..3087491 /locus_tag="PA2729" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251419.1" /db_xref="GeneID:882570" /translation="MSGPKVVRIVTREEAIATCERDLQRLDKALARWENQASRLAQLS DAERAAAHARRASLHALLEQERWLDVQLQVKIESEFLKRDLAEREERAIRQAAETRQQ HRRLQENASALLQALDARPDAASAALRQTLHTLADGALRDDAEALLAQGLAALASAPA EERLSEAQRELAQRLKTGETPMSLEQWRARQQQDAPHEQRLARIDRHIAELQLLQGEA SAQAFLERLARAEAEQRPERRNLLLDSLVLDLAQAAREHQQQRQRLEHLQDLASEVAA LGAAEHAELLQRAAACQPDSDPQQLAELTERCNAILTAHLQQQAALARRQAVLQGLAS LGYEVREGMATAWAQTGRVVLRKPATPGYGLEVGGKADNGRLQLRAVALNANRDSQRD RDIETLWCGEFQRLQALLAAQGGELSVERALGVGEVALKEIGEEEQREMGVARQRGL" misc_feature <3086208..>3087488 /locus_tag="PA2729" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" gene complement(3088660..3089613) /locus_tag="PA2730" /db_xref="GeneID:882628" CDS complement(3088660..3089613) /locus_tag="PA2730" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251420.1" /db_xref="GeneID:882628" /translation="MALNLSKAVVGYLQVRPEEKFTARQIAEWVFATYPAECQEKRAN SRGDYIKSDADLVQQLVAEISSQRPRMQMKHPALKTTEGRPRKYYYSEKSDSAEVAAA EGEGATAAADIGTSMLDEHALYPLLSQYLWEEFGVFSKRINEKRSSNKRGPNGNRWLY PDMVGMQDLGADWHREVRDCVKQYSDKRTKLWSFEVKLLINRSNIRECFFQAVSNSSW SNFGYLVAAEVSGQETLKELRMLFAAHGIGFIRLDVDNPADSQVLIPARERDAIDWDM ANRLATENRDFLNYVKQVKQFYQTGEARFKDWDVPEEYSIQ" misc_feature complement(3088687..3089610) /locus_tag="PA2730" /note="Uncharacterized conserved protein [Function unknown]; Region: COG2958" /db_xref="CDD:442198" gene complement(3090221..3093661) /locus_tag="PA2732" /db_xref="GeneID:882706" CDS complement(3090221..3093661) /locus_tag="PA2732" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251422.1" /db_xref="GeneID:882706" /translation="MKPTDTSEKALEQLIVRHLAGISEHASVPPNAVQSPGAIYALGG YVLGRATDFNRDVALDTVQLLAFLQATQPDAVETLELAHEGIKRTQFLHRLQGEITKR GVVDVLRKGVSHGPVRVDLYRLLPTPGNTNAAEAFGRNIFSITRQVRYSHDSGNELDL VIFVNGLPVLTFELKNSLTKQTVADAIVQYQSTRSPQELLFQPGRCIAHFAVDDAEVY FCTELKGKASWFLPFNQGWNNGAGNPPNPNGLKTDYLWKQVLAKESLANIIESFAQVV EEQETDATTGRKKKKRKPVFPRFHQLRTVRALLRRTRSDGVGKRYLIQHSAGSGKSNT IAWLAHQLVELRSVADPLMPQFDSIIVITDRRALDTQIARTIKGYDHVASIFGHSDNA QELRDYLRRGRKIIVTTVQKFPFILEEIGDLSGRTFALLIDEAHSSQGGKTTARMHEA LSGKTDEEAFEEDATQDAVNTEIEKRIQSRRMLSNASYFAFTATPKNRTLELFGEKTV VDDKVEFRSPEELTYTTKQAIQEGFILDVIAHYTTLDSFYQVAKTVENDPDFDKARAL KKIRHYVESHDKAIRRKAEIMVDHFVAQVMGAKKIGGKARAMIVCNGIARAIDYWREV SDYLEQIKSPYKAIVAYSGEFEIGGEKKTEADLNDFPSKEIPDRLRQDPYRFLIVANK FVTGFDEPLLHTMYVDKKLAGVQAVQTLSRLNRAHPQKHDTFVLDFADNAEAVKKAFQ DYYRATIQTGETDANKLHDLKADLDDKQIYSWPQVEDLVALYLSGADRDKLDPILDHC VEQYQANLDEDNQVEFKGKAKAFVRSYGFLAAILSYGHPAWEKLSIFLNFLIPKLPAP KEEDLSKGVLESIDIDSYRVEARAALKMAMDDTDATVEVAPVGGGGGKGEPDIDKLSN ILKTFNDLFGNIDWKDADKIGKVIAEEIPVRVAQDKAYQNAQVNSDRQNAKLEHDKAL NRVVLELLSDHTELFKQFSDNPNFKRWLTDMVFDVTYQQNPAHGVEDVRMRALDIVRD RFDAAVVWSQAVDMLLDRLAAGGRNSLGIADLALIEETSGLSVSHVLFPVLNLLSAHD VGILNREFVRVGSTDTPQTMSFDEVRLLAQKDPEGDDWAECLSIRWALQDAQRIAHGR " misc_feature complement(3090641..3093652) /locus_tag="PA2732" /note="Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ... [Defense mechanisms]; Region: COG0610" /db_xref="CDD:440375" gene complement(3093658..3094185) /locus_tag="PA2733" /db_xref="GeneID:882707" CDS complement(3093658..3094185) /locus_tag="PA2733" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251423.1" /db_xref="GeneID:882707" /translation="MTAQATKRFFATVQNKLHRAIHGQTAAEVVHTRADANKQHMGLT TWTDASLGKIQKFDVAVAKNYLTEDEMAQLSRLVNAYLDVAESMALRKIPMTMQDWET RLNRFIEATDREVLQDAGRVTAEIARAHAESEFEKYRIVQDRLFESDFDRLLKQIEPP HQLDNKPGKKKGDDA" misc_feature complement(3093745..>3094182) /locus_tag="PA2733" /note="Virulence protein RhuM family; Region: Virulence_RhuM; cl19850" /db_xref="CDD:473228" gene complement(3094757..3096052) /locus_tag="PA2734" /db_xref="GeneID:882624" CDS complement(3094757..3096052) /locus_tag="PA2734" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251424.1" /db_xref="GeneID:882624" /translation="MLRNGRLFGHRVETGFPDLPILEVSLRTGVRVRDMDNLKRKQVM SQKEKYKRAVKGDIAYNMMRMWQGAVGPVPEDGLVSPAYVVVKPYAEANSTYFSYLFR TAAYMQEVNKFSRGIVADRNRLYWESFKQMPSLVPPRPEQDQIVTYLRTQDAHIACFI RAKRDLIALLTEQKLRIIDHAVTRGLDASVKLKPSDIEWLGEVPAHWEVKRLKFLAGN ITSQTTTKADDEIYLALEHVQSWTGVARPLGGEVEFASTVKRFVADDVLFGKLRPYLA KVTRVVCAGVCVSEFLVLRSRQELILPAYLEQLLRCKRVIDLISSSTAGAKMPRADWN FIGNVRLPIPRKDEQEAILSHIGRETKDLDETIARAEDEIKLIREYRDRLIADAVTGQ VDLRGWQPGPDDVVSDDDLAALGDDDAGSSDDEEADAED" misc_feature complement(3095531..3095965) /locus_tag="PA2734" /note="Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR) and similar domains; Region: RMtype1_S_TRD-CR_like; cd16961" /db_xref="CDD:341131" misc_feature complement(order(3095531..3095533,3095606..3095611, 3095618..3095620,3095630..3095632,3095648..3095650, 3095654..3095656,3095744..3095749,3095753..3095758, 3095765..3095767)) /locus_tag="PA2734" /note="TRD-CR/TRD-CR interface [polypeptide binding]; other site" /db_xref="CDD:341131" misc_feature complement(3094898..3095425) /locus_tag="PA2734" /note="Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR) and similar domains; Region: RMtype1_S_TRD-CR_like; cl38903" /db_xref="CDD:365779" misc_feature complement(order(3094913..3094918,3094922..3094924, 3094985..3094990,3094997..3094999,3095009..3095011, 3095027..3095029,3095033..3095035,3095117..3095122, 3095126..3095131,3095138..3095140)) /locus_tag="PA2734" /note="TRD-CR/TRD-CR interface [polypeptide binding]; other site" /db_xref="CDD:341179" misc_feature complement(3094865..3095131) /locus_tag="PA2734" /note="Restriction endonuclease S subunit [Defense mechanisms]; Region: HsdS; COG0732" /db_xref="CDD:440496" gene complement(3096130..3098508) /locus_tag="PA2735" /db_xref="GeneID:882625" CDS complement(3096130..3098508) /locus_tag="PA2735" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="restriction-modification system protein" /protein_id="NP_251425.1" /db_xref="GeneID:882625" /translation="MQKRQQDQSQIKWVADFIWNIADDRLRDVYVRGKYRDVILPFTV LRRIDAVLEPTKQAVLERKKLLDSAKVANQNGALQAAAGQAFYNVSEFTLAKLKASAA GQRLREDFIAYLDGFSPNVQEVLTKFNFRNQIQKLVDAHILGYLIEDFLDPEVNLSPL PVKDADGRTKLPALDNHGMGTVFEELIRRFNEENNEEAGEHFTPRDVVQLMAKLLFLP VADRIESSTYSLYDGSCGTGGMLTVAEEALKELAEQHGKDVSIHLFGQEISDETYAIC KADLLLKGEGAEAENIVGGADKSTLSADQFRSREFDFMISNPPYGKSWKTDLERMGGK KEFSDPRFIVNHGGDAEFKLITRSSDGQLMFQVNKLSKMKHDTALGSRIALVHNGSAL FTGDAGQGESNIRRWVLENDWLEAIIALPLNIFYNTGIATYIWVLANKKAEHRKGRVQ LIDASQWFAPLRRNLGKKNCELAEGDIRRILDLYLGEAQETDSSTDQSKWFDTQDFGY WKITVERPLRLKSQLKTSAIDTLRFASGDEELRTEIYAEHGDKLYTSFAKLKPEIEAW LKGGSEDDDDAEDGDEEGTHAKKAVPEKRRKRLLDATTWQRDKGLLDLALLAQKVLGD AVFDDHNVFRAEFDIAMKAHDKKLTAADKKAIFKAVSWRDDTAPPVVAKRHKLKASDA FIPSFDGRYFIETGKHREVVWYEPDADLRDTEQVPLKELGGIDAFFEREVLPHAPDAW IDGEKTQIGYEISFARYFYKPTPLRPLDDIRADILKLEQQTEGLLHKIVGTA" misc_feature complement(3098059..3098466) /locus_tag="PA2735" /note="HsdM N-terminal domain; Region: HsdM_N; pfam12161" /db_xref="CDD:463478" misc_feature complement(3097141..3097980) /locus_tag="PA2735" /note="Type I restriction-modification system, DNA methylase subunit [Defense mechanisms]; Region: HsdM; COG0286" /db_xref="CDD:440055" protein_bind 3096488..3096500 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(3098626..3098979) /locus_tag="PA2736" /db_xref="GeneID:882659" CDS complement(3098626..3098979) /locus_tag="PA2736" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251426.1" /db_xref="GeneID:882659" /translation="MIVNQRVIGLAIMKRCIVGIRQPEGSPPQRSETPSIWFPSLASL AAVLSDDNRRLLRLIHDKQPKSLTELAELSGRKVPNLSRTLRMMADYGLVSLQRNVRD VQPTALATEFLVVLD" misc_feature complement(3098629..3098943) /locus_tag="PA2736" /note="Predicted transcriptional regulator, contains HTH domain [Transcription]; Region: COG4190" /db_xref="CDD:443344" gene complement(3099306..3099382) /locus_tag="PA2736.1" /db_xref="GeneID:3240267" tRNA complement(3099306..3099382) /locus_tag="PA2736.1" /product="tRNA-Pro" /db_xref="GeneID:3240267" gene complement(3099473..3099829) /locus_tag="PA2737" /db_xref="GeneID:882953" CDS complement(3099473..3099829) /locus_tag="PA2737" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251427.2" /db_xref="GeneID:882953" /translation="MLEPSHNDELPPIPGKRYFTIGEVSDLCAVKPHVLRYWEQEFPQ LNPVKRRGNRRYYQRQDVLMIRQIRALLYDQGFTIGGARQRLSGDEAKDDVTQYKQLI RQMIAELEEVLLVLKK" misc_feature complement(<3099551..3099775) /locus_tag="PA2737" /note="Helix-Turn-Helix DNA binding domain of putative MlrA-like transcription regulators; Region: HTH_MlrA-like_sg2; cd04765" /db_xref="CDD:133393" misc_feature complement(order(3099665..3099673,3099722..3099724, 3099764..3099772)) /locus_tag="PA2737" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133393" gene complement(3099810..3100112) /gene="himA" /locus_tag="PA2738" /db_xref="GeneID:882954" CDS complement(3099810..3100112) /gene="himA" /locus_tag="PA2738" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="integration host factor subunit alpha" /protein_id="NP_251428.1" /db_xref="GeneID:882954" /translation="MGALTKAEIAERLYEELGLNKREAKELVELFFEEIRQALEHNEQ VKLSGFGNFDLRDKRQRPGRNPKTGEEIPITARRVVTFRPGQKLKARVEAYAGTKS" misc_feature complement(3099813..3100106) /gene="himA" /locus_tag="PA2738" /note="integration host factor subunit alpha; Reviewed; Region: ihfA; PRK00285" /db_xref="CDD:178961" misc_feature complement(order(3099846..3099848,3099855..3099857, 3099864..3099866,3099876..3099878,3099882..3099884, 3099891..3099893,3099897..3099899,3099912..3099932, 3099939..3099941,3099945..3099947,3099957..3099959, 3099963..3099971,3099975..3099977,3100038..3100040, 3100095..3100100)) /gene="himA" /locus_tag="PA2738" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:259857" misc_feature complement(order(3099837..3099842,3099867..3099869, 3099873..3099875,3099879..3099884,3099969..3099971, 3099975..3099986,3100002..3100007,3100011..3100016, 3100023..3100025,3100035..3100037,3100077..3100079, 3100086..3100088)) /gene="himA" /locus_tag="PA2738" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:259857" gene complement(3100116..3102494) /gene="pheT" /locus_tag="PA2739" /db_xref="GeneID:882969" CDS complement(3100116..3102494) /gene="pheT" /locus_tag="PA2739" /EC_number="6.1.1.20" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phenylalanine--tRNA ligase subunit beta" /protein_id="NP_251429.1" /db_xref="GeneID:882969" /translation="MKFSEKWLRSWANPQVSHDELVARLSMVGLEVDADLPVAGAFSG VVVGEVLSTEQHPDADKLRVCQVSNGSETFQVVCGAPNVRAGLKIPFAMIGAELPDDF KIKKAKLRGVESFGMLCSAKELQISEENAGLLELPADAPVGQDVRTYLELADYTIEVG LTPNRGDCLSLAGLAREVSAIYDVPLAPVAVDAVAAQHDETRPVELAAPAACPRYLGR VIRNVDLSRPTPLWMVERLRRSDIRSIDPVVDVTNYVMIELGQPMHAFDLAEINGGVR VRMAEDGEKLVLLDGQEITLRADTLVIADHQRALAIAGVMGGEHSGVSDSTRDLFLEA AFFDTIALAGKARSYGLHTDSSHRFERGVDSQLARKAMERATRLILDIVGGEPGPIVE QVSEAHLPKVAPITLRAERVTQMLGMPLDAAEIVRLLQALELTVVADGEGQWSVGVPS HRFDISLEVDLIEELARLYGYNRLPVRYPQARLAPNNKPEARAALPLLRRLLVARGYQ EAITFSFIDPALFELFDPGTQPLTLANPISADMAAMRSSLWPGLVKALQHNLNRQQSR VRLFESGLRFVGQLEGLKQEAMLAGAICGKRLPEGWANGRDGVDFFDAKADVEAVLAS AGALGDFSFVPGEHPALHPGQTARIEREGRLVGYLGALHPELAKKLDLEQPVFLFELL LAEVVDGHLPKFRELSRFPEVRRDLALLVDQDVPAQDILTQIRAAAGEWLTDLRLFDV YHGKGIDPHRKSLAVGLTWQHPSRTLNDDEVNSTTQNIVTSLEERFNATLRK" misc_feature complement(3100119..3102494) /gene="pheT" /locus_tag="PA2739" /note="phenylalanyl-tRNA synthetase subunit beta; Reviewed; Region: pheT; PRK00629" /db_xref="CDD:234804" gene complement(3102529..3103545) /gene="pheS" /locus_tag="PA2740" /db_xref="GeneID:882970" CDS complement(3102529..3103545) /gene="pheS" /locus_tag="PA2740" /EC_number="6.1.1.20" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phenylalanine--tRNA ligase subunit alpha" /protein_id="NP_251430.1" /db_xref="GeneID:882970" /translation="MENLDALVSQALEAVRHTEDVNALEQIRVHYLGKKGELTQVMKT LGDLPAEERPKVGALINVAKEKVQDVLNARKTELEGAALAARLAAERIDVTLPGRGQL SGGLHPVTRTLERIEQCFSRIGYEVAEGPEVEDDYHNFEALNIPGHHPARAMHDTFYF NANMLLRTHTSPVQVRTMESQQPPIRIVCPGRVYRCDSDLTHSPMFHQVEGLLVDEGV SFADLKGTIEEFLRAFFEKQLEVRFRPSFFPFTEPSAEVDIQCVICSGNGCRVCKQTG WLEVMGCGMVHPNVLRMSNIDPEKFQGFAFGMGAERLAMLRYGVNDLRLFFDNDLRFL GQFR" misc_feature complement(3102532..3103545) /gene="pheS" /locus_tag="PA2740" /note="Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis]; Region: PheS; COG0016" /db_xref="CDD:439787" gene complement(3103643..3103999) /gene="rplT" /locus_tag="PA2741" /db_xref="GeneID:882982" CDS complement(3103643..3103999) /gene="rplT" /locus_tag="PA2741" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L20" /protein_id="NP_251431.1" /db_xref="GeneID:882982" /translation="MARVKRGVIARRRHKKILKLAKGYYGARSRVFRVAKQAVIKAGQ YAYRDRRQRKRQFRALWIARINAGARQNGLSYSRLIAGLKKAAIEIDRKVLADLAVNE KAAFTAIVEKAKASLA" misc_feature complement(3103655..3103996) /gene="rplT" /locus_tag="PA2741" /note="50S ribosomal protein L20; Provisional; Region: rplT; PRK05185" /db_xref="CDD:179959" misc_feature complement(order(3103718..3103726,3103748..3103750, 3103757..3103762,3103769..3103774,3103790..3103792, 3103802..3103804,3103811..3103819,3103823..3103867, 3103874..3103879,3103889..3103894,3103901..3103912, 3103916..3103939,3103952..3103963,3103967..3103984)) /gene="rplT" /locus_tag="PA2741" /note="23S rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:197305" misc_feature complement(order(3103673..3103678,3103694..3103699, 3103715..3103717,3103724..3103735,3103850..3103852, 3103859..3103864,3103868..3103873,3103880..3103882, 3103892..3103894)) /gene="rplT" /locus_tag="PA2741" /note="L21 binding site [polypeptide binding]; other site" /db_xref="CDD:197305" misc_feature complement(order(3103700..3103702,3103709..3103711, 3103718..3103720,3103790..3103792,3103796..3103801, 3103808..3103810,3103817..3103822,3103829..3103831)) /gene="rplT" /locus_tag="PA2741" /note="L13 binding site [polypeptide binding]; other site" /db_xref="CDD:197305" gene complement(3104023..3104217) /gene="rpmI" /locus_tag="PA2742" /db_xref="GeneID:879426" CDS complement(3104023..3104217) /gene="rpmI" /locus_tag="PA2742" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L35" /protein_id="NP_251432.1" /db_xref="GeneID:879426" /translation="MPKMKTKSGAAKRFKKTAGGLKHKHAFKSHILTKMTTKRKRQLR GTSMLNKSDVARVERSLRLR" misc_feature complement(3104035..3104217) /gene="rpmI" /locus_tag="PA2742" /note="Ribosomal protein L35 [Translation, ribosomal structure and biogenesis]; Region: RpmI; COG0291" /db_xref="CDD:440060" gene complement(3104279..3104830) /gene="infC" /locus_tag="PA2743" /db_xref="GeneID:879427" CDS complement(3104279..3104830) /gene="infC" /locus_tag="PA2743" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-3" /protein_id="NP_251433.1" /db_xref="GeneID:879427" /translation="MIIKREMRQDKRAQPKPPINENISAREVRLIGADGQQVGVVSID EAIRLAEEAKLDLVEISADAVPPVCRIMDYGKHLFEKKKQAAVAKKNQKQAQVKEIKF RPGTEEGDYQVKLRNLVRFLSEGDKAKVSLRFRGREMAHQELGMELLKRVEADLVEYG TVEQHPKLEGRQLMMVIAPKKKK" misc_feature complement(3104282..3104800) /gene="infC" /locus_tag="PA2743" /note="Translation initiation factor IF-3 [Translation, ribosomal structure and biogenesis]; Region: InfC; COG0290" /db_xref="CDD:440059" gene complement(3104830..3106752) /gene="thrS" /locus_tag="PA2744" /db_xref="GeneID:882972" CDS complement(3104830..3106752) /gene="thrS" /locus_tag="PA2744" /EC_number="6.1.1.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="threonine--tRNA ligase" /protein_id="NP_251434.1" /db_xref="GeneID:882972" /translation="MPIITLPDGSQRSFDHPVSVAEVAQSIGAGLAKATLAGKVDGRL VDACDTIDRDATLQIITPKDEEGLEIIRHSCAHLVGHAVKQLYPTAKMVIGPVIEEGF YYDIFFERPFTPEDMAAIQQRMRELIDKDYDVIKKMTPRAEVIELFKSRGEDYKLRLI DDMPDEKAMGLYFHEEYVDMCRGPHVPNTRFLKAFQLTKISGAYWRGDSKNEQLQRIY GTAWADKKQLAAYIQRIEEAEKRDHRRIGKQLDLFHLQEEAPGMVFWHPNGWSVYQVL EQYMRKVQRDHGYVEVRTPQVVDRILWERSGHWSNYAENMFTTSSESRDYAVKPMNCP CHVQIFNQGLKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQV KKEAADFIKLTLQVYRDFGFTDIAMKLSTRPAKRVGSDELWDRAEGALADALNESGLA WEYQPGEGAFYGPKIEFTLKDCLGRNWQCGTLQYDPNLPERLDASYIAEDNNRKRPVM LHRAILGSFERFIGMLIEHYAGAFPAWLAPTQAVVMNITDKQADFAAEVVRILGESGF RAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREVESKAVAVRTREGEDLGSMPVTQFA ELLAQAVSRRGRQDSE" misc_feature complement(3104839..3106752) /gene="thrS" /locus_tag="PA2744" /note="Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: ThrS; COG0441" /db_xref="CDD:440210" gene complement(3106919..3106994) /locus_tag="PA2744.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /db_xref="GeneID:9793390" ncRNA complement(3106919..3106994) /ncRNA_class="other" /locus_tag="PA2744.1" /note="Not available" /db_xref="GeneID:9793390" gene complement(3107002..3107865) /locus_tag="PA2745" /db_xref="GeneID:882973" CDS complement(3107002..3107865) /locus_tag="PA2745" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_251435.1" /db_xref="GeneID:882973" /translation="MSGELASFEVDGYQLVYQDLGEGTPVLLVHGSLCDYRYWQWQLR SLGERHRLIVPSLRHYYPERWDGQGADFTSARHVADLLALVERLGEPVHLLGHSRGGN LALRLALAAPDALRSLSLADPGGDYAAEVYAHAGLPAPEEPLERNQFRRQALELIRGG EAERGLELFVDTVSGAGVWKRSSATFRRMTLDNAMTLVGQVADQPPALALSELRSIDL PSLILNGERSPLPFPATAEALAAALPRAELQRIQGASHGLNATRPAAFNRSVLEFLAR VDGVAPDVETS" misc_feature complement(3107035..3107844) /locus_tag="PA2745" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene 3108057..3108383 /locus_tag="PA2746" /db_xref="GeneID:882961" CDS 3108057..3108383 /locus_tag="PA2746" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251436.1" /db_xref="GeneID:882961" /translation="MNTPIFYELFRNHPLHAPSARTLASMLALGLALAGVWALLLGWG IGLGIDNFAMYFGWTALLMTILLVALFLGATLLRMEAIWLAFLLALPLLTSLTGCLAL VGAGPE" gene 3108468..3108644 /locus_tag="PA2746a" /db_xref="GeneID:17373364" CDS 3108468..3108644 /locus_tag="PA2746a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719756.1" /db_xref="GeneID:17373364" /translation="MTPESFVTLLIVAWLGLAGVTLWAFLRVPRRRARLQRKARQAEN RHPARPPQPLPQRS" gene complement(3108970..3109257) /locus_tag="PA2747" /db_xref="GeneID:882962" CDS complement(3108970..3109257) /locus_tag="PA2747" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251437.1" /db_xref="GeneID:882962" /translation="MEKSIKMLFDAFQATFAVSTQMRPDGGALLTLRNGEEIVTRRVV SAAQLADEKRMYWFINAVRRDLALEAGSLPVDVVGTLRRLQERGLPSYMAG" misc_feature complement(3108991..3109248) /locus_tag="PA2747" /note="Protein of unknown function (DUF3509); Region: DUF3509; pfam12021" /db_xref="CDD:432267" gene complement(3109456..3109689) /locus_tag="PA2747a" /db_xref="GeneID:17373365" CDS complement(3109456..3109689) /locus_tag="PA2747a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719757.1" /db_xref="GeneID:17373365" /translation="MSGRRFGEFELRATWLREDSGYLAEIEITSIDDGRTEWLVLPGQ PPCESPAAALSLAEAALYRVRGFDARGRPLFSD" gene complement(3109743..3110525) /locus_tag="PA2748" /db_xref="GeneID:882964" CDS complement(3109743..3110525) /locus_tag="PA2748" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="methionine aminopeptidase" /protein_id="NP_251438.1" /db_xref="GeneID:882964" /translation="MIKSAEEIQRMSVAGALTAKVLEALDEVVRPGISTAEIDRFCER YIVDTLAAIPGSKGQYGYPFTVNTSVNEVVCHGWPSAQQILRDGDIVNVDVTVIKDGY FGDSSKMYRVGAIDRQAQKLLDVTRECLYRAIRVVRPDATLGDIGHAIQSHAEANGYS VVREYCGHGIGRKMHEAPQVLHFGRAGAGARLKAGMTFTIEPMINQGGHAVKLHKDGW TVTTRDRRLSAQYEHTVLVTERGCRVLTLRDEEREALADLAG" misc_feature complement(3109773..3110522) /locus_tag="PA2748" /note="Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]; Region: Map; COG0024" /db_xref="CDD:439795" gene 3110901..3111614 /gene="endA" /locus_tag="PA2749" /db_xref="GeneID:882965" CDS 3110901..3111614 /gene="endA" /locus_tag="PA2749" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA-specific endonuclease I" /protein_id="NP_251439.1" /db_xref="GeneID:882965" /translation="MLSRLFVGLFALLLASAGQANAPRTFSEAKKIGWKLYARQSVEF YCGCRYSGNRVDLASCGYKPRKNANRARRIEWEHIVPAWVIGHQRRCWQNGGRSNCAR HDSTYQRAEADLHNLVPSIGEVNGDRSNFGFGWLPQKPQQYGACPMVVDFKARKAMPR PQIRGMIARTYFYMSDRYGLRLSKQDRQLYNAWHKQYPPQTWERQRNHMVGCVMGWGN PYVGPVDLATCSNLSSRRR" misc_feature 3110913..3111563 /gene="endA" /locus_tag="PA2749" /note="HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and...; Region: HNHc; cl00083" /db_xref="CDD:469607" gene 3111633..3112151 /locus_tag="PA2750" /db_xref="GeneID:882941" CDS 3111633..3112151 /locus_tag="PA2750" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251440.1" /db_xref="GeneID:882941" /translation="MIFRTLALLPLCAALAFAADAGERRFDCTVVAIHDDASLGCRLP GANKALRIQLNAVELPAAEPWRRRAREALEDMLLGKSATIREQGRDARFRILGAAWVT PADCPTCGHTLDAGLALLTIGLASWRDAPDSGQTAEARGQYRFAEEEARARKAGQWRP RDAAPRDGSPRT" misc_feature 3111708..3112133 /locus_tag="PA2750" /note="Endonuclease YncB, thermonuclease family [Replication, recombination and repair]; Region: YncB; COG1525" /db_xref="CDD:441134" gene complement(3112126..3112356) /locus_tag="PA2750a" /db_xref="GeneID:17373366" CDS complement(3112126..3112356) /locus_tag="PA2750a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719758.1" /db_xref="GeneID:17373366" /translation="MKREKVRDRQAAGKISATHIIANPTLAREWIVFFKKDGGRSYFL VDESDEVMSFRRLDDAVKELRGLGIKFAEIHL" gene 3112878..3113777 /locus_tag="PA2751" /db_xref="GeneID:882942" CDS 3112878..3113777 /locus_tag="PA2751" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251441.1" /db_xref="GeneID:882942" /translation="MFRTAYREIGLFGLVKRTVNEFLEDDMPTYASALAYQMLFSLFP FLLVLITLVGYLHLPEFFAWLREQAALLLPPEAMDQVNPVIDQLQQQKGGLLSIGIAV ALWTSSAGIRSMMIALNAAYDVKESRPVWKRFSLSILYTLGIALLLLVAAGLMVTGPQ VIAWIAGLVGLEQYLVTLWTWLRWPLAVFLLMLAVALFYYLVPDVEQRFRFITPGSVL SVIAWIAASLAYGFYVKNFANYNAMYGSIGAIIILLLYFYLSAAVVLFGAELNAVIEH HSEDGKDPGERELPDNDDPELKA" misc_feature 3112896..3113738 /locus_tag="PA2751" /note="Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase) [Function unknown]; Region: BrkB; COG1295" /db_xref="CDD:440906" gene complement(3114240..3114683) /locus_tag="PA2752" /db_xref="GeneID:882734" CDS complement(3114240..3114683) /locus_tag="PA2752" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251442.1" /db_xref="GeneID:882734" /translation="MLTDWAAYAGLFLSAFGSATLLPLQSETVLAALLLRGGQSVAWL LALAIVGNVLGSWVNWWLGRYLEHFRGRRWFPVGEVQLLRAQRHYRRYGRWTLLLSWV PVIGDPLTLVAGIMREPCWSFLLIVGLAKTLRYLVLAALVLGWAG" misc_feature complement(3114249..3114665) /locus_tag="PA2752" /note="Uncharacterized membrane protein YqaA, VTT domain [Function unknown]; Region: YqaA; COG1238" /db_xref="CDD:440851" gene 3114819..3115193 /locus_tag="PA2753" /db_xref="GeneID:882735" CDS 3114819..3115193 /locus_tag="PA2753" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251443.1" /db_xref="GeneID:882735" /translation="MFIPGHLHLASASEVDRQAFDIHLRYRVLEAEARPVAVHFDMEG RIDGQPFSESFELPRDAAVHFASRASRLARRHGLRLRQGPIVRQRREYDAMFDDLRRR LKLKSGEAIDLDRYLRGEAGAS" misc_feature 3114819..3115166 /locus_tag="PA2753" /note="Domain of unknown function (DUF5064); Region: DUF5064; pfam16703" /db_xref="CDD:435530" gene 3115304..3115633 /locus_tag="PA2754" /db_xref="GeneID:882724" CDS 3115304..3115633 /locus_tag="PA2754" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251444.1" /db_xref="GeneID:882724" /translation="MTLKTRSARAKQAIQDQAMAELQDLIAEVDQLMSGTGSLAGKEG ANLREQINSVLHRGRDAIERTRRGVVQRSQAAAEATEEYVEDHPWQTIAVSAGAGFLL GLLMGRR" misc_feature 3115313..3115630 /locus_tag="PA2754" /note="Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family [Translation, ribosomal structure and biogenesis]; Region: ElaB; COG4575" /db_xref="CDD:443632" gene complement(3115699..3115896) /locus_tag="PA2754a" /db_xref="GeneID:17373367" CDS complement(3115699..3115896) /locus_tag="PA2754a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719759.1" /db_xref="GeneID:17373367" /translation="MSRIEVAVLVGTSVPESLRSKGLLACWILMVDGAMWAGPFTSRD EAEALKGTWELSWPLEAAISA" gene 3116075..3116305 /locus_tag="PA2755a" /db_xref="GeneID:17373334" CDS 3116075..3116305 /locus_tag="PA2755a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719760.1" /db_xref="GeneID:17373334" /translation="MDTSPHTFSNLFRQLGLPAGRDDIVAFLARHHLEEGTALPDAPF WNPAQASFLREALAEDSDWAEQVDELALQLTR" misc_feature 3116075..3116296 /locus_tag="PA2755a" /note="Protein of unknown function (DUF2789); Region: DUF2789; pfam10982" /db_xref="CDD:431577" gene 3116654..3117124 /gene="eco" /locus_tag="PA2755" /db_xref="GeneID:882725" CDS 3116654..3117124 /gene="eco" /locus_tag="PA2755" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ecotin" /protein_id="NP_251445.1" /db_xref="GeneID:882725" /translation="MKALLIAAGVAALSSTAMAAKLDEKVPYPKADAGFTRQVIHLPK QDAEDAFKVEIIAGKTLEADCNQQRLGGELEEHTLEGWGYSYYRLDKVSGPMSTMMAC PGQKKEQRFIPVVGEGFLLCYNSKLPIVVYAPKDVEVRYRIWSASEKVEKAVSE" misc_feature 3116654..3117115 /gene="eco" /locus_tag="PA2755" /note="ecotin; Provisional; Region: PRK03719" /db_xref="CDD:179637" misc_feature order(3116894..3116908,3117017..3117034) /gene="eco" /locus_tag="PA2755" /note="secondary substrate binding site [active]" /db_xref="CDD:153074" misc_feature 3116942..3116953 /gene="eco" /locus_tag="PA2755" /note="primary substrate binding site [active]" /db_xref="CDD:153074" misc_feature 3116948..3116953 /gene="eco" /locus_tag="PA2755" /note="inhibition loop" /db_xref="CDD:153074" misc_feature 3117083..3117115 /gene="eco" /locus_tag="PA2755" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:153074" gene complement(3117177..3117611) /locus_tag="PA2756" /db_xref="GeneID:882793" CDS complement(3117177..3117611) /locus_tag="PA2756" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251446.1" /db_xref="GeneID:882793" /translation="MRHFDERIGVTMRILGMLLGTVLLAGCSTSTPSLDETDQVPKER LYNYQFRDDGDAFLVVSRDREFLGSVCNTRLIIDSRLAAEIQAGESARFRLPAGLRVV SVQGDGICRGEAPKQVVHVQNGQTTHYRITVDSGLNIGLVPG" gene complement(3117750..3118193) /locus_tag="PA2757" /db_xref="GeneID:882946" CDS complement(3117750..3118193) /locus_tag="PA2757" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251447.1" /db_xref="GeneID:882946" /translation="MQGIKRKLVYVTAYELIGMSISTLGLALLAGSTPTTTGPLAVVI TTVAVTWNFIYNCLFEFWERRQAVRGRSIARRVAHAIGFQLTLVVYLIPLIAWWMGIS LLEAFWLDLALIVLIPCYTFLFNWAFDRLFGLPTSALPAGEAASV" misc_feature complement(3117795..3118187) /locus_tag="PA2757" /note="PACE efflux transporter; Region: PACE_transport; NF033664" /db_xref="CDD:411267" gene 3118296..3119183 /locus_tag="PA2758" /db_xref="GeneID:882947" CDS 3118296..3119183 /locus_tag="PA2758" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251448.1" /db_xref="GeneID:882947" /translation="MNFSSDTIELFLAVLDRGSFSGAARALGRVPSAVSMGIANLEAE LGFALFERTHREARPTALARALAPQARMIAEQLAQLQVHALELSQGLESRLSLGVVAD IDSGRLFGALRTLSERYPLLDVEVLSAAQDDALALLHGGRISLCFGFAGISVNPQERF QYVGAESLVATISPRHPALQKPGQALYLEELVNVRQILVASCDLPLADTRPLIAGACW RTDSLGTALEMVEAGIGWGNFPLSRVAPLLATGRLVRLDFRNTKNELKLPVHAIWLKN QPLRKAAQELVGMLATRPD" misc_feature 3118317..3119174 /locus_tag="PA2758" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene complement(3119394..3119708) /locus_tag="PA2759" /db_xref="GeneID:882718" CDS complement(3119394..3119708) /locus_tag="PA2759" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251449.1" /db_xref="GeneID:882718" /translation="MKILIAVFAALALSACASPPASNAPALAASTSKAPYDYAMCVLP KWQRQAPGVALVEEGRGYRLADAGQWLEVQPARGGSLVRIHDQQPWVTRGAFIDAART CS" gene 3120073..3121350 /locus_tag="PA2760" /db_xref="GeneID:882719" CDS 3120073..3121350 /locus_tag="PA2760" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251450.1" /db_xref="GeneID:882719" /translation="MLKKRICLLALGIATASQAMANDQEAAKGFVEDSHLDLFFRNGY ISRDYKHGRQDKAEWGQAATATFTSGFTQGTVGVGVDAFGLYAVRLDGGKGRSGAAGI DFFKQGDSGSAADDLSKGGAAVKFRISNTVLKYGDQMPSLPVLSYDNSRLLPESYSGT LITSKEIEGLELNAGRFTAESRKSAEGRDSGGLKSINVFGGKYAFTDHFNASLYASDV EDVLKKQYINLNYTIPLQADQSLNFDFNGYRTKLDSDFADQNFNGNRDNKIWSLAASY TIDAHTFMIAHQRNTGDTGYNYGWYQNAGGIGDGGTTIWLANSYWSDFNAEDERSWQV SYALDFAKYGVPGLTYRVAYVRGDNIKTAETSNGKEREIFNQVQYVVQSGPAKDLTLR LRSSFLRVSNDARSYNDDGNEIRAFVEYPFSVF" misc_feature 3120154..3121341 /locus_tag="PA2760" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene 3121462..3121878 /locus_tag="PA2761" /db_xref="GeneID:882730" CDS 3121462..3121878 /locus_tag="PA2761" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251451.1" /db_xref="GeneID:882730" /translation="MIAFALACHCLSISTMPFRKHLLLPLLGLALLLGGCGPSVSYSY IPPTSDAGLHCVSQCNAEKRQCKTLSKLQQRQDEALYQAQSTAYNYCMQNSDKKKRKS CPYPQRNFDFGDDCQEEYRSCYQSCGGTIRRIVHQD" gene complement(3121921..3122265) /locus_tag="PA2762" /db_xref="GeneID:882731" CDS complement(3121921..3122265) /locus_tag="PA2762" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251452.1" /db_xref="GeneID:882731" /translation="MSDFITVLRDTCPVPVLDATKWKRIDGDPHTVNLNAYASADGSK LMGTWICTPGKWEVNYERWEFCHFLDGYCIITPEGEQPVHLRAGDVFVIEPGLRGTWE VVETVRKYFVFA" misc_feature complement(3121927..3122241) /locus_tag="PA2762" /note="Predicted enzyme of the cupin superfamily [General function prediction only]; Region: COG3450" /db_xref="CDD:442673" gene complement(3122377..3122586) /locus_tag="PA2763" /db_xref="GeneID:882726" CDS complement(3122377..3122586) /locus_tag="PA2763" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251453.1" /db_xref="GeneID:882726" /translation="MDDTLRFASRLCKFIVAASFLLVAVASLCLWWTGQAYEYAALAF FPFAVPMLLLIMVCDLLAALNGRRR" protein_bind complement(3122657..3122670) /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" gene 3122856..3123044 /locus_tag="PA2763a" /db_xref="GeneID:17373368" CDS 3122856..3123044 /locus_tag="PA2763a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719761.1" /db_xref="GeneID:17373368" /translation="MPRIALVLGVLLVSACAQPVTPDSIVEESFSRSASERQLEELNR QGLPYEQYRLRRQRILGR" gene 3123599..3124294 /locus_tag="PA2764" /db_xref="GeneID:882727" CDS 3123599..3124294 /locus_tag="PA2764" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251454.1" /db_xref="GeneID:882727" /translation="MSNLPAIILVHGFWGGAAHWSKVILELKRLGHDNLHAVELPLTS LADDAERTRKMIAQQQGPVLLVGHSYGGAVITEAGNQPNVVGLVYIAAFAPDSGESPG GITQEHLPLAAANLATDSDGYLWVKADRFHESFCQDLAADEGLVMGITQKAPLASTFG DAIGSPAWKSKPSWYQISSADRMIAPENQERMAARIAPRKIVTLDASHASLASRAKEV AALIDEAAVATAH" misc_feature 3123617..3124261 /locus_tag="PA2764" /note="Alpha/beta hydrolase family; Region: Abhydrolase_6; pfam12697" /db_xref="CDD:463673" gene complement(3124342..3125241) /locus_tag="PA2765" /db_xref="GeneID:882740" CDS complement(3124342..3125241) /locus_tag="PA2765" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251455.1" /db_xref="GeneID:882740" /translation="MIDGGNMSAAQPGILTPIPVVGRYLFFSISQPEQVAATLASLAA ATDGYQLVVGIGHSLMLSLGKTVEGMKDYPVLAAPGIDLPSTPSALWCWLRGEDRGEV TLRSHALERSLAPAFQRTGAVDAFLYGEDRDLSGYKDGTENPKGDAALEAALVSGRGA GLDGGSFVAVQQWLHDFDRMQAIPGEEMDNIIGRRKSDDEELEDAPAYAHVKRTEQES FEPAAFLLRRGAPWSDEHRAGLLFAAFGRSFEAFEVQWLRMIGVEDGVLDGLFRFTRP ISGSYFWCPPMADGRLDLSALGL" misc_feature complement(3124375..3125211) /locus_tag="PA2765" /note="Dyp-type peroxidase family; Region: Dyp_perox_fam; TIGR01413" /db_xref="CDD:273607" gene complement(3125583..3126164) /locus_tag="PA2766" /db_xref="GeneID:882741" CDS complement(3125583..3126164) /locus_tag="PA2766" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251456.1" /db_xref="GeneID:882741" /translation="MRYKPEQKQATRALLLSKAAPLVKRQGFASTGLDTLMKAAGLTT GAFYSQFSSKAELLEAILQRELSAQHDAFPLDSLEQLAGATRLYLSRGHAQHADMGCP IPALAAEVGRAGPEVRETFERALEQRQRRLAELMGDENRAWVLTCLSVGAVLLARAQA SEVARDKVLDAALEHALGLLSASGAVSPQADRD" misc_feature complement(3125697..3126149) /locus_tag="PA2766" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene 3126252..3127220 /locus_tag="PA2767" /db_xref="GeneID:882772" CDS 3126252..3127220 /locus_tag="PA2767" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="NP_251457.1" /db_xref="GeneID:882772" /translation="MTLAPRHLRIEQRGRVLQVLLDNPPANFLTTAVMQELADLLEDL EQRQDIGAVILSGAADGVFLTHFDVDEIERAVAPITFSMPAWLTRLLLESESLLRHLP GARKLLRRTLLAGVADMNLFHEVTAHMRRMDKVFIAAINGLALGGGCELALACDLRLM AEDDQVERFLGQPEVLIGLIPGGGGTQMLARSLGVARALELCLEGQLLEPRQALALGL VNGLAPAEELLEAADALAQRLSRRSPQAVRLIKRSIYQAASRDWTEGMASEKAGFLSA ASQGNTRRAMREYIERVRTITREERPFRRADFDDLTEGNAIDMAYR" misc_feature 3126273..3127127 /locus_tag="PA2767" /note="Enoyl-CoA hydratase/carnithine racemase [Lipid transport and metabolism]; Region: CaiD; COG1024" /db_xref="CDD:440647" gene 3127226..3127708 /locus_tag="PA2768" /db_xref="GeneID:882773" CDS 3127226..3127708 /locus_tag="PA2768" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251458.1" /db_xref="GeneID:882773" /translation="MTASPSPVSATPWLTLSIRLMAGGFLLFFGLALATLLLRLDQSL LDSDAGRLLLRLVRWGDQQGGGQHYELMISTIYLVWGAFLWRAASQPFRHRLFIDFTV AANAAHFGLMFLQGLLMPGEHIHLAGDVLLGWASLLPLMLFWIPQRKRAAPSLAVERK " misc_feature <3127430..>3127618 /locus_tag="PA2768" /note="Family of unknown function (DUF6632); Region: DUF6632; pfam20337" /db_xref="CDD:466487" gene complement(3127860..3128270) /locus_tag="PA2769" /db_xref="GeneID:878780" CDS complement(3127860..3128270) /locus_tag="PA2769" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251459.1" /db_xref="GeneID:878780" /translation="MPAPQVGVGVLILRDGKVLLGRRKGSHGAGCWSAPGGHLEFGEA VEDCALREALEETDLALSELRHGPFSNDVFEGRHYLTAFILAGCAEDAEARLMEPDKC DGWAWFDWADLPEPLFAPLASLRRRGYSPFDPKR" misc_feature complement(3127893..3128261) /locus_tag="PA2769" /note="MutT homolog 2; Region: NUDIX_MTH2_Nudt15; cd04678" /db_xref="CDD:467561" gene complement(3128292..3129071) /locus_tag="PA2770" /db_xref="GeneID:878781" CDS complement(3128292..3129071) /locus_tag="PA2770" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="isomerase" /protein_id="NP_251460.1" /db_xref="GeneID:878781" /translation="MELTIFQVDAFADSPFQGNPAAVCPLDAWLDDERLQAIAEENNL SETAFVVGRDGDYRLRWFTPQVEVDLCGHATLATAWVLIHKLDDASPVLRFATRSGEL SVRREGDSLAMDFPAKRPEPCATPDGLLEALGIAEAEVLKTDDYLVVVDDEKTIAALA PDFARLKGLPCRGVAVTARSQRFDFVSRWFGPNVGVNEDPVTGSAHTSLAPYWAQRLG KTRLSAEQGGARKGRLECDVRGERVVISGKAALYMSGTLHL" misc_feature complement(3128295..3129071) /locus_tag="PA2770" /note="Predicted epimerase YddE/YHI9, PhzF superfamily [General function prediction only]; Region: YHI9; COG0384" /db_xref="CDD:440153" gene 3129729..3130754 /locus_tag="PA2771" /db_xref="GeneID:882750" CDS 3129729..3130754 /locus_tag="PA2771" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251461.1" /db_xref="GeneID:882750" /translation="MLACPLPPDEALRQQALDDMALVDTPAEHYLDALVELARETFGV KTVLISLIDHDRQWFKARIGLDAEQTPRDLSFCGHAILASEPLMVTDASRDPRFHDNP LVTGPPFIRFYAGEPLHASNGQAIGTLCLIDPSPRLLDLREGRQLNRLSILAEGYLQL RSLTEHTRFLRQEIDREQRKSLLDPLTQLWNRAGFHALHQHELELARASDQRIGIIYS DIDHFKRINDTLGHRAGDSVLREAASRLRAALRPEDLLARFGGEEFVAMVRVRETTEL TMIANRIRELMEATPIDCAGTSVPVTISAGCTLAGSGEEPERALARADAALYDAKRAG RNRVVSV" misc_feature 3129819..3130148 /locus_tag="PA2771" /note="GAF domain; Region: GAF; pfam01590" /db_xref="CDD:460259" misc_feature <3130119..3130745 /locus_tag="PA2771" /note="GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants [Signal transduction mechanisms]; Region: GGDEF; COG2199" /db_xref="CDD:441801" gene complement(3130761..3131159) /locus_tag="PA2772" /db_xref="GeneID:882751" CDS complement(3130761..3131159) /locus_tag="PA2772" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251462.1" /db_xref="GeneID:882751" /translation="MPKRSTWSRAPSDSTVALRRSTASRSESGCNCVCTWVEPLTGAV AAFIRPPHAAGRQSKMSDEDDIHEPEHDHLLDNDYLEDERDEDTFGALDEPDACGTGR RRSCEYCDAVQVPVDSEGFSICADCAGLED" gene 3131246..3131416 /locus_tag="PA2772a" /db_xref="GeneID:17373369" CDS 3131246..3131416 /locus_tag="PA2772a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719762.1" /db_xref="GeneID:17373369" /translation="MSKLQHIGLFLFVLLSAGLALGYRVDCPDGSHVETYLLRGLGAR LLGNDLCEQAAP" gene complement(3131509..3132030) /locus_tag="PA2773" /db_xref="GeneID:882744" CDS complement(3131509..3132030) /locus_tag="PA2773" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251463.1" /db_xref="GeneID:882744" /translation="MSRLIMPGGPLSQESDVRIFCSPKERLDFYRREIHYETGQLSSR TNAYLTAQSFLVIAYASSMANLNPAWGELFTLVVPALLALLGIVNSLHAWPGIQASSE IICHWQFKQSCLLHSDPEIGLAYDDSPLFSEREVNRGSFEKTLLFSRRVPFLFAGFWC ALGVFSLWLQLAG" gene complement(3132229..3132816) /locus_tag="PA2774" /db_xref="GeneID:882745" CDS complement(3132229..3132816) /locus_tag="PA2774" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251464.1" /db_xref="GeneID:882745" /translation="MSQLPIPLPLNESRWRYVTASGGGMTVAFLAGSGGSITLLSPEG ENVSFRYGGVGGGIGLGMRLPRFGKVNLNVKGKSVGGAGALEALPSTGTVLVADGLVG RDLSRGDFTGPCMYVELGAGVIAGGSGTAILFGLDPKLLAAVALASASPLTAALGASM SRQLLQSSRGALLMAGVNVGAQFGGGAAAYLGALF" gene complement(3132821..3133258) /locus_tag="PA2775" /db_xref="GeneID:880541" CDS complement(3132821..3133258) /locus_tag="PA2775" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251465.1" /db_xref="GeneID:880541" /translation="MTTSSGSRIGGLLHASLFSLLGLGLLLAGGFKTVERYHFLRTAQ EAQGTVSALNAGGSHPQIDFTSVSGERISYPQGGFIFGYQVGEPVRVLYEAGRPAASA IVDDAGALWGTGAFLCGFGALFGIVGFRGLLGLRSSQPTSKGH" misc_feature complement(3132857..3133162) /locus_tag="PA2775" /note="Protein of unknown function (DUF3592); Region: DUF3592; pfam12158" /db_xref="CDD:432368" gene complement(3133449..3133525) /locus_tag="PA2775.1" /db_xref="GeneID:3240248" tRNA complement(3133449..3133525) /locus_tag="PA2775.1" /product="tRNA-Val" /db_xref="GeneID:3240248" gene 3133710..3134993 /locus_tag="PA2776" /db_xref="GeneID:880542" CDS 3133710..3134993 /locus_tag="PA2776" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251466.1" /db_xref="GeneID:880542" /translation="MPHTPYPSSYYAASANPAPPRPELQGEVETDVCVIGAGYTGLST ALFLLENGFKVTVLEAAKVGFGASGRNGGQIVNSYSRDIDVIERTVGKREAQLLGEMA FEGGRIIRERVARYGIQCDLKDGGVFAAFTEKQMDHLRAQKQLWERYGHNQLEIMDAK RIREVVATDNYIGGMLDMSGGHIHPLNLALGEAAAVESLGGRIYEQSPATRIERGASP VVHTPQGKVKAKFIVVAGNAYLNGLVPELAAKSMPCGTQVITTEPLNEELAHSLLPQD YCVEDCNYLLDYYRLSGDKRLIYGGGVIYGARDPADIEAIIRPKMLKTFPQLKDVKID FAWTGNFLLTLSRLPQVGRIGDNIYYSQGCSGHGVTYTHVAGKVLAEALRGQAERFDA FAGLPHYPFPGGKLFRVPFTAIGAWYYSLRDKLGV" misc_feature 3133791..3134891 /locus_tag="PA2776" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" gene complement(3135044..3136000) /locus_tag="PA2777" /db_xref="GeneID:882780" CDS complement(3135044..3136000) /locus_tag="PA2777" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251467.1" /db_xref="GeneID:882780" /translation="MANDKRTSPPTPRQPAKGGAAGKRQGHAAEGTRKPRARGEERKE KPADGRSATALTANERREIDDKQPPRAAVLHEVIRVQGEHELQRTLAALWWSAVAAGL TIGLSLMGMGLFRAALPEQEWAIIVSSFGYPMGFLAVILARQQLFTENTLTAVLPVMT EPTLEKAWQLLRLWSVVLFGNIVGTLLFAWAVLHLPIFNEAADAAFLEIGREVMHNDL AQMFAKGIVSGWMIATMVWLIPAAEGAKIWIIAMVTYLMALGSFTHIVVGSAEVGYLA FAGEIGWAEFLLKFALPTLGGNIVGGSLIFALISHAQIRSEG" misc_feature complement(3135050..3135802) /locus_tag="PA2777" /note="Formate/nitrite transporter FocA, FNT family [Inorganic ion transport and metabolism]; Region: FocA; COG2116" /db_xref="CDD:441719" gene complement(3136082..3136963) /locus_tag="PA2778" /db_xref="GeneID:882781" CDS complement(3136082..3136963) /locus_tag="PA2778" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251468.1" /db_xref="GeneID:882781" /translation="MLPARVELREVPFFPQEAYQCGPAALATMLGQRGLALTPGQLKD EVFIPGREGSLQLEMVAAARRHGMLVYPLQGGLESVLEEVAAGNPVLVLQNQAFSWWP RWHFAVVVGFDRERRELVLRSGITRRWVTDFTSFESTWKRSGRWAVLTLPGDRLPATA AAVPWLKAASDSEETGHPKVARRAYEEAVRRWPEDAFAWFALGNSRYAAGDSAAAEQA MLTSVERRVDFAAGWFNLSQLLAERGCAAPARQAQACARALQPGEARFAAALPQAVAP AARCAELPACPVGAPPR" misc_feature complement(3136223..3136945) /locus_tag="PA2778" /note="PA2778 family cysteine peptidase; Region: C39_PA2778_fam; NF033920" /db_xref="CDD:468245" misc_feature complement(3136394..3136480) /locus_tag="PA2778" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(order(3136238..3136240,3136247..3136252, 3136259..3136264,3136271..3136273,3136340..3136345, 3136349..3136354,3136361..3136366,3136373..3136375, 3136445..3136447,3136451..3136456,3136463..3136468, 3136475..3136477)) /locus_tag="PA2778" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature complement(3136289..3136381) /locus_tag="PA2778" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" gene complement(3137044..3137442) /locus_tag="PA2779" /db_xref="GeneID:882762" CDS complement(3137044..3137442) /locus_tag="PA2779" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251469.1" /db_xref="GeneID:882762" /translation="MRTTTSIRRVAAVLAALHLLTFAEVPLAQAAMIGTAEVMQQQQH NLDRQQLLKMLDDQGVQKKLEAMGVPRDQVASRINSLTNAELAQFNQQLDQAPAGGII GIIVLFLVIFIITDMLCATDIFSFIKCINR" misc_feature complement(3137059..3137370) /locus_tag="PA2779" /note="Family of unknown function (DUF6627); Region: DUF6627; cl41525" /db_xref="CDD:477684" gene 3137850..3138194 /locus_tag="PA2780" /db_xref="GeneID:882763" CDS 3137850..3138194 /locus_tag="PA2780" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251470.1" /db_xref="GeneID:882763" /translation="MLGTRLKAARIRAGYSQKQLGMLVGMDEFSASARMNQYERERHS PNMRTSEQLAMVLQVPMAYLYCPEDELAELILKVSSLTPEFKKELTRFIEQLLAAQGS TSRQPVRTRSEL" misc_feature 3137850..3138059 /locus_tag="PA2780" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" gene 3138191..3138532 /locus_tag="PA2781" /db_xref="GeneID:882770" CDS 3138191..3138532 /locus_tag="PA2781" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251471.1" /db_xref="GeneID:882770" /translation="MNKSLDSDSITTAIMALRRLRDTHPEQYRELLPLCASGLVETLV GQSDGDDRRKAETQSETIARWTWLQLLGWAQNNSLSQQQIESLYSIVEGIRSCRPLMQ ERARLLQLARG" gene 3139011..3139670 /locus_tag="PA2782" /db_xref="GeneID:882771" CDS 3139011..3139670 /locus_tag="PA2782" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251472.1" /db_xref="GeneID:882771" /translation="MAKTWIYAASAAAIGGALIGGWLLDPAPPEASPQARQSPAAQAA AAPTAALAAPAADATRMLAPTPVTTPAPRERVTLWQGELRSREGAQGIPEYLAQVEPA LLDTLALGQVLEMSLPGRERPLQARLASTHNSAGLPVWRGGLVDGDEAESLTVVRGSL ETHINVATLDGSYSIIVDNRSGKTRVIDENDIAARSDPHGDHVDAPLAELPPMPPPAQ G" gene 3139748..3141547 /locus_tag="PA2783" /db_xref="GeneID:878794" CDS 3139748..3141547 /locus_tag="PA2783" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251473.1" /db_xref="GeneID:878794" /translation="MKKSLLCSTLALAVASAAQAAPKTVDIMVLYTPAATQTANGRDI DARIASYIEFANTAYEKSGVNLRLRLVHKQRLDWADYPTVTGANLDRFMRDPQVQRLR EQYGADLVSLVNRSQNSGNGYITCGIGYMGSGDKNSGRFHGNAKDIAYNLTGVDCGLN TFAHEAGHNMGLRHSYEQDLESSYYDPRYAHSGTYEWSRGYGVQGRFATVMAYPHAFG TNKQAPFFANPRLVNAECANQPCGREEHADAVRALNSMATQIADFRPTKVPGTVNPGS GGDTPTPPDLPWCTKAKLGGLLGDGEFASMEGWRAWSGNAQLSLVNVAKGCRDNALLV DVRGFDLLVRPIAPLRAGSGYRLSGKVMLKAANTRETVRMALLSERADGALAYNPAQS VELSVSGNEFSRLEKTFDYRPAADQRNLYVAVWSDSGASLLVDEMNLQEAQAAPPSVP PAPKRIAYDFESGIGGWSGVHASARATRVASAGRLALEAYQRRYAGTGASTSLLGNLE AGRTYAFSADVRVGDGRGSQAMTYAYLYLESQGRPGEYLPLGYKVVENGRWASLRGQV QLPKGPIKRAELMILSGNQQESMFIDNVQLLQK" misc_feature 3139883..3140272 /locus_tag="PA2783" /note="Metallo-peptidase family M12B Reprolysin-like; Region: Reprolysin_3; pfam13582" /db_xref="CDD:463926" misc_feature 3141119..3141499 /locus_tag="PA2783" /note="Carbohydrate binding domain; Region: CBM_4_9; cl19911" /db_xref="CDD:418717" protein_bind 3140363..3140375 /locus_tag="PA2783" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(3140376..3140388) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 3141719..3142276 /locus_tag="PA2784" /db_xref="GeneID:878795" CDS 3141719..3142276 /locus_tag="PA2784" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251474.1" /db_xref="GeneID:878795" /translation="MTSDRLAGYSRLMATLTLLLIAGMLLLNAACWIFPDLASEHGLG FALPATGVAGDLGVVARDMPLWQALGGILLSSLPLLVLASGLQALRRLFQHYGRGEYF CEDAAALLGKVGLCLACWVLANFLLEPLLTVWVTFLQPQGQRIVSLSFGSAELVSLFA AASVMVIARIQRKAALLAEENRQFV" misc_feature <3141971..3142261 /locus_tag="PA2784" /note="Protein of unknown function (DUF2975); Region: DUF2975; pfam11188" /db_xref="CDD:463239" gene 3142285..3142503 /locus_tag="PA2785" /db_xref="GeneID:882757" CDS 3142285..3142503 /locus_tag="PA2785" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251475.1" /db_xref="GeneID:882757" /translation="MPIEIRLDVMLALRKARSKDLAQAIGITEQNLSLLKQGKVKGIR LATLEAICAYLACQPGDLLEYLPGPTEE" misc_feature 3142288..3142485 /locus_tag="PA2785" /note="DNA-binding transcriptional regulator, XRE family [Transcription]; Region: YozG; COG3655" /db_xref="CDD:442872" gene 3142618..3143085 /locus_tag="PA2786" /db_xref="GeneID:882758" CDS 3142618..3143085 /locus_tag="PA2786" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251476.1" /db_xref="GeneID:882758" /translation="MAKSSERFESLRRDIDALARRLDVPSVLIMRSLPRHMRVEASAG RLEDTYPIGAEGRKSVHEDGAKPLYCERVVDRDAPLHVRDSRQETEWAGNEDEVEFGL SNYLGYPVHAPDGTPYGTVCVLDSRPRDYSAEERALLEELRRKVEALLAETVS" misc_feature 3142702..3143043 /locus_tag="PA2786" /note="GAF domain; Region: GAF_2; cl21515" /db_xref="CDD:473894" gene 3143152..3144390 /gene="cpg2" /locus_tag="PA2787" /db_xref="GeneID:882782" CDS 3143152..3144390 /gene="cpg2" /locus_tag="PA2787" /EC_number="3.4.17.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutamate carboxypeptidase" /protein_id="NP_251477.1" /db_xref="GeneID:882782" /translation="MHARRLPRLLPLALAFLLSPAAFAADTPAAELLRQAEAERPAYL DTLRQLVAVDSGTGQAEGLGQLSALLAERLQALGAQVRSAPATPSAGDNLVATLDGTG SKRFLLMIHYDTVFAAGSAAKRPFREDAERAYGPGVADAKGGVAMVLHALALLRQQGF RDYGRITVLFNPDEETGSAGSKQLIAELARQQDYVFSYEPPDRDAVTVATNGIDGLLL EVKGRSSHAGSAPEQGRNAILELSHQLLRLKDLGDPAKGTTLNWTLARGGEKRNIIPA EASAEADMRYSDPAESERVLADARKLTGERLVADTEVSLRLDKGRPPLVKNPASQRLA ETAQTLYGRIGKRIEPIAMRFGTDAGYAYVPGSDKPAVLETLGVVGAGLHSEAEYLEL SSIAPRLYLTVALIRELSAD" misc_feature 3143242..3144387 /gene="cpg2" /locus_tag="PA2787" /note="glutamate carboxypeptidase; Reviewed; Region: PRK06133" /db_xref="CDD:235710" gene complement(3144412..3146007) /locus_tag="PA2788" /db_xref="GeneID:882783" CDS complement(3144412..3146007) /locus_tag="PA2788" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_251478.1" /db_xref="GeneID:882783" /translation="MNESVARVFDRILRGLGLKTLNAQFLLSYALMFGLAACASVALY LSMSISPETINVAGAQRMLSQKMAREALQLRLGAGDPKALAATIAQYERSAADLDAGN AERNVSRMGAPEIAAQRQKVAQIWGRYRAMLDQVAQPASQVDLRGFSQYSTELLGELN NLVSLMSARADSVQHTQMWIAFGCLLAILVLVVLGRQFGLAPLMRQLRGLEVALTEVG AANFTHALAAGHADNEIGRIVAGYERMRQDVSGLLANVKRSAAETDKDVAEALEQALG AGDQVARQHQDLDQVATAMNEMSATVAEVARHANHAAHSTRDAAALAHEGRRLVEHAS SQTGALAEELEQTALALNTLHQHAGSVGQVLTVISSIAEQTNLLALNAAIEAARAGEA GRGFAVVADEVRSLANRTQQSTQEIQGLIEQLQDGANDAVAAMRGSASHAQSNLVEAD SAAQALGRIVATVEELDGLNQQIATAAEEQSQVAQDIDRNITNVSGLSEQAHEGTAAV LSANQRVKEHMAGLRVVLGRFRT" misc_feature complement(3144415..3145998) /locus_tag="PA2788" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene 3146251..3147330 /locus_tag="PA2789" /db_xref="GeneID:882774" CDS 3146251..3147330 /locus_tag="PA2789" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251479.1" /db_xref="GeneID:882774" /translation="MIPVAPLPLIVPLIYLSSFVAGIWLLVWLSLLAFSPRARQRLRR RWPSRGLLMLLLLIPLGLRAWLEIGLWQYERERAREEAAHSAVLERPTRLGGIEMPAG TRLKLELKHQPESFREAEFPTPVTIRGVATRHLQRWLQSEQDNPQDPWKTTGVHPTSL RLRGEGVAEIEGWRCDASQEIAFASERDGRPAAFEGCSLAIGNRADDIDFPAGARLFA SDGMVYTDGYRDAERWRVMPETGQRVSVRGIALSGGALAFDRDRRLYGLGGTVLAEAL QLGAWHYPAGTEVSLSPRAAWRAQHPHAWLFSPTREAASHASGERLEHGVSLLQTLDG QELERLDNRAAGVIDFIELEIGDER" gene 3147765..3148250 /locus_tag="PA2790" /db_xref="GeneID:882775" CDS 3147765..3148250 /locus_tag="PA2790" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251480.1" /db_xref="GeneID:882775" /translation="MGRSSSPRVGWAGPLPAHFPPGKERNSFPRFPQRSWMKKSPLLI LSVLLAACGPDKLISDLPSPNGQYHVEVRKCPEKGSITWGEEIQVSLLETGKSEKCHA VVRSLAQFDLRASADQLQLEWLSDTELRAWHPSFEPGNQPNGSRLKHDAPVKMVFAPK R" gene complement(3148339..3148629) /locus_tag="PA2791" /db_xref="GeneID:882786" CDS complement(3148339..3148629) /locus_tag="PA2791" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251481.1" /db_xref="GeneID:882786" /translation="MKWYSRISLGLSLAVASAFLVAYWRSLVSHSYPNMNAPGLIAYL LVFPACALLLHSPALAFVLQQRKLGSARERALQWTINLALWMAPLCFIFASL" gene complement(3148723..3149319) /locus_tag="PA2792" /db_xref="GeneID:882787" CDS complement(3148723..3149319) /locus_tag="PA2792" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251482.1" /db_xref="GeneID:882787" /translation="MNVYRKVSRSAATWLCAALLAASGHAWAEDWWVVHKGDDPAELD VFLADADSLAPVPGIENAWQVQIAMLFDSFHLLSAHQYRCDTREVKVVNAKTFSNNGQ PTNLQFTFAKGWTPLPNESHEAVLQFICAPQERERNGMRSTGRGVPLQAVITAVGMVE MERAQANLAEARRKLEEAKSDRVMGELDRLLGNEPRKP" protein_bind 3149164..3149176 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(3149400..3150434) /locus_tag="PA2793" /db_xref="GeneID:878824" CDS complement(3149400..3150434) /locus_tag="PA2793" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251483.1" /db_xref="GeneID:878824" /translation="MRLPRPRFALSAALLLCLSGCVSELDSGAYGSMDDPRNAQMLDL VDQALKGNMAVVLVADVMPHKSLSDALTMTQWTPTAIWEYEKDPKVTFGRKFQTNALQ RKPDETYLFKAFEVHILPPGKYLLTGGDDYQIHGLLDQVGARSGPPGSGHGANGTAYL SPELYREYYREEVWKDATYGSEIKTEKVCTAVHVASGACVSWGEQQYTQTTQGSQAGY YQQTDSRDVPSIKVQARLPVDKALASFTVQGGQLLLAPRMHLKTPGYKYQQSKCRAID PKKIECPLENLTVYTWPAPMDFSQSLIAQRALSDKHRQLLSRLQPLQITPLRKQGMED PVWGVPLSLK" gene 3152504..3153502 /locus_tag="PA2795" /db_xref="GeneID:882754" CDS 3152504..3153502 /locus_tag="PA2795" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="tRNA-dihydrouridine synthase A" /protein_id="NP_251485.1" /db_xref="GeneID:882754" /translation="MRPEPTNAPAALSRRFSVAPMMDWTDRHCRFFLRQLSRHTLLYT EMVTTGALLHGDRQRFLRYDECEHPLALQLGGSVPAELAACARLAEEAGYDEVNLNVG CPSDRVQHNMIGACLMGHPALVADCVKAMLDAVEIAVTVKHRIGINGRDSYAELCDFV GQVREAGCRSFTVHARIAILEGLSPKENREVPPLRYEVAAQLKKDFPDLEIVLNGGIK TLEACREHLQTFDGVMLGREAYHNPYLLAAVDSQLFGSEAPPLSRSEALLRLRPYIER HQAEGGAMHHVTRHILGLAQGFPGSRRFRQLLSVDVHKAADPLRVFDQALELLAGR" misc_feature 3152516..3153499 /locus_tag="PA2795" /note="tRNA dihydrouridine(20/20a) synthase DusA; Region: PRK11815" /db_xref="CDD:236991" gene 3153582..3154505 /gene="tal" /locus_tag="PA2796" /db_xref="GeneID:882755" CDS 3153582..3154505 /gene="tal" /locus_tag="PA2796" /EC_number="2.2.1.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transaldolase B" /protein_id="NP_251486.1" /db_xref="GeneID:882755" /translation="MTSKLEQLKQYTTVVADTGDFDAIARLKPVDATTNPSLLLKAAA LPRYAEHLRQATAGSGGDAGLACDRFAVAVGKDILGVIPGRISTEVDARLSFDSEATL ARAHRLIELYDEQGIDRERVLIKIASTWEGIRAAEILEREGIQTNLTLLFSFAQAVAC ADAGVFLISPFVGRIYDWYKKSENRDYAGAEDPGVQSVSRIYRYYKANGYKTVVMGAS FRNLGQIEQLAGCDRLTISPDLLQQLADAQGELPRLLLPGEGEPRQVLDESAFRWQMN EDAMATEKLAEGIRLFARDQEKLEYQLATRH" misc_feature 3153582..3154499 /gene="tal" /locus_tag="PA2796" /note="transaldolase B; Provisional; Region: PRK05269" /db_xref="CDD:235381" misc_feature order(3153630..3153632,3153678..3153680,3153684..3153689, 3153840..3153842,3153846..3153848,3153954..3153956, 3154020..3154022,3154026..3154028,3154086..3154088, 3154101..3154103) /gene="tal" /locus_tag="PA2796" /note="active site" /db_xref="CDD:188644" misc_feature order(3153870..3153872,3154386..3154388,3154395..3154397, 3154407..3154412,3154428..3154430,3154437..3154439, 3154449..3154451) /gene="tal" /locus_tag="PA2796" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:188644" misc_feature 3153954..3153956 /gene="tal" /locus_tag="PA2796" /note="catalytic residue [active]" /db_xref="CDD:188644" gene complement(3154593..3155075) /locus_tag="PA2797" /db_xref="GeneID:878722" CDS complement(3154593..3155075) /locus_tag="PA2797" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251487.1" /db_xref="GeneID:878722" /translation="MSTGKIQFAEQNGSFVLKFVGEVRLTLCSALDSTIEKIFAALNF SAIIIDLTETQSIDSTTLGLLAKLSILSRQKIGLLPTLVTTNPDITRLLQSMGFDQVF NIVDRPIPCPECLSDLPPQDQSEDVVRDKVLEAHRILMGLNESNREAFHDLVSALERH " misc_feature complement(3154758..3155060) /locus_tag="PA2797" /note="Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation; Region: STAS_anti-anti-sigma_factors; cd07043" /db_xref="CDD:132914" misc_feature complement(order(3154782..3154784,3154788..3154793, 3154803..3154805,3154872..3154877,3154884..3154892, 3154896..3154904,3154908..3154910,3154980..3154982, 3154998..3155006,3155010..3155012)) /locus_tag="PA2797" /note="anti sigma factor interaction site [active]" /db_xref="CDD:132914" misc_feature complement(3154899..3154901) /locus_tag="PA2797" /note="regulatory phosphorylation site [posttranslational modification]; other site" /db_xref="CDD:132914" gene complement(3155072..3156256) /locus_tag="PA2798" /db_xref="GeneID:878822" CDS complement(3155072..3156256) /locus_tag="PA2798" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_251488.1" /db_xref="GeneID:878822" /translation="MHKVSATLLIIDDDEVVRESLAAYLEDSNFKVLQALNGLQGLQI FESEQPDLVICDLRMPQIDGLELIRRIRQTASETPIIVLSGAGVMSDAVEALRLGAAD YLIKPLEDLAVLEHSVRRALDRAYLRVENQRYRDKLEAANRELQASLNLLQEDQNAGR QVQMNMLPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASS AFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLINTKLGKHVTMLGGVIDL EKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLPVGLFDDATYDDRVMELPPSFSLSLF SDGILDVLPGATLKEKEASLPEQVAAAGGTLDGLRQVFGLANLAEMPDDIALLVLSRN LA" misc_feature complement(3155081..3156247) /locus_tag="PA2798" /note="Phosphoserine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms, Transcription]; Region: RsbU; COG2208" /db_xref="CDD:441810" misc_feature complement(3155894..3156241) /locus_tag="PA2798" /note="phosphoacceptor receiver (REC) domain of Pseudomonas aeruginosa RssB and similar domains; Region: REC_RssB-like; cd17555" /db_xref="CDD:381107" misc_feature complement(order(3155948..3155953,3155966..3155971, 3155978..3155980,3155990..3155992,3155996..3155998)) /locus_tag="PA2798" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:381107" gene 3156503..3156802 /locus_tag="PA2799" /db_xref="GeneID:878823" CDS 3156503..3156802 /locus_tag="PA2799" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251489.1" /db_xref="GeneID:878823" /translation="MQPIEHNYSEKRDFIRMKLDTPVTIRCEGRESVALCRDLSASGL LLEAQSELAPGDHLRVSIPSTHETLTGLELEARVVRCERLGPGRHSLGLSIVAIH" misc_feature 3156530..3156796 /locus_tag="PA2799" /note="PilZ domain; Region: PilZ; pfam07238" /db_xref="CDD:399904" gene complement(3156860..3157564) /locus_tag="PA2800" /db_xref="GeneID:879842" CDS complement(3156860..3157564) /locus_tag="PA2800" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251490.1" /db_xref="GeneID:879842" /translation="MRARGVNWIERSARILACASLALAPTLSLAASEEDPWESINRPI FTFNDTLDTYALKPLAQGYQKVTPNFVQDGVHNFFNNLGDVKNLANNLLQAKFHNAGV DTSRLLFNSTFGLAGLIDVATPMGLQRNDEDFGQTLGYWGVGSGPYVMLPFLGPSTLR DAPAKIPDIYVSPYHYMDDVRARNVMFGINTVDTRANLLKSEKLISGDKYIFIRNAYL QNREFKVKDGEVEDDF" misc_feature complement(3156863..3157564) /locus_tag="PA2800" /note="Lipoprotein subunit MlaA of the ABC-type intermembrane phospholipid transporter Mla [Cell wall/membrane/envelope biogenesis]; Region: MlaA; COG2853" /db_xref="CDD:442101" gene 3157667..3158071 /locus_tag="PA2801" /db_xref="GeneID:879843" CDS 3157667..3158071 /locus_tag="PA2801" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251491.1" /db_xref="GeneID:879843" /translation="MADRQLLHTAHIPVRWGDMDSYGHVNNTLYFQYLEEARVAWFET LGIDLEGAAEGPVVLQSLHTYLKPVVHPATVVVELYAGRLGTSSLVLEHRLHTLEDPQ GTYGEGHCKLVWVRHAENRSTPVPDSIRAAIA" misc_feature 3157688..3158068 /locus_tag="PA2801" /note="Acyl-CoA thioesterase FadM [Lipid transport and metabolism]; Region: FadM; COG0824" /db_xref="CDD:440586" gene complement(3158073..3158792) /locus_tag="PA2802" /db_xref="GeneID:880139" CDS complement(3158073..3158792) /locus_tag="PA2802" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251492.1" /db_xref="GeneID:880139" /translation="MPVDQSRQYLRIRDQLAADIAQGVLQVKLPSERELAERFLCTRI TLREALQQLETEGLVYRENRRGWFVAPPRIRYNPTRTTGFMEYVSAQGRQPRTETLHA ERRAAGAWLAKRMGLEDSAPVYFLQRRRWVDERPVLIELIALDAGWCPGLLDHDLDTS LMSLLRERFGLQPTRCQLAMHPTALNAAQAEPLQLAPGSPALYLERLSYAEGQRVVEF DQEFWRPDALEIVLDAAYPGA" misc_feature complement(3158091..3158771) /locus_tag="PA2802" /note="phosphonate utilization transcriptional regulator PhnR; Region: phnR; TIGR03337" /db_xref="CDD:132380" gene 3158926..3159669 /locus_tag="PA2803" /db_xref="GeneID:880140" CDS 3158926..3159669 /locus_tag="PA2803" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251493.1" /db_xref="GeneID:880140" /translation="MPSSDQLPRFTALLFGLSGGLVDFGARTLSLALLRSHPHSPAEH LRDASLLPFAEAQSFLLRRKPNKSERQRLEQALDEAAGEQAEAIAGAVALLESLDEQR IPYAWQDELPESVCQRLAAPLGRANALIPLAGARPWPAPDGCWQALARLGIERLDGCV LVSAQPRQLQAGLNAGLWTIGLAASGPSCGLSPADWDALGHTERDRLRADATLELYRL GVHSVIDHLGELQPCLHDLAVRRLKGEKP" misc_feature <3159112..3159666 /locus_tag="PA2803" /note="phosphonoacetaldehyde hydrolase; Provisional; Region: PRK13478" /db_xref="CDD:184075" gene 3159666..3160247 /locus_tag="PA2804" /db_xref="GeneID:880389" CDS 3159666..3160247 /locus_tag="PA2804" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251494.1" /db_xref="GeneID:880389" /translation="MSRARHRFLDELAERFASHGAEPYGEAVSQAEHALQCATLAERA GCSDSLVVAALLHDIGHLYEDPAQIDEEDLRHEEFGARLLRELFPESVWQPVRLHVSA KRFLCAVDPSYHASLSPASRHSLVLQGGPFDERAAAAYIKAPYAQDGLTLRRLDDLAK DPAMRTPELTHFFPLLERLLRIDPDRAHLRPTG" misc_feature 3159681..3160205 /locus_tag="PA2804" /note="phosphonate degradation operons associated HDIG domain protein; Region: Phn-HD; TIGR03276" /db_xref="CDD:132319" misc_feature 3159837..3159839 /locus_tag="PA2804" /note="Mg2+ binding site [ion binding]; other site" /db_xref="CDD:238032" gene 3160321..3160584 /locus_tag="PA2805" /db_xref="GeneID:880390" CDS 3160321..3160584 /locus_tag="PA2805" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251495.1" /db_xref="GeneID:880390" /translation="MPKESLLRELSALREQLEQQPPLNEEQRAELELLIRDIELKLAN EDALNEGSLVDGVNLAVERFEVSHPTLAGTLRSIVQSLANMGI" misc_feature 3160336..3160581 /locus_tag="PA2805" /note="Domain of unknown function (DUF4404); Region: DUF4404; pfam14357" /db_xref="CDD:464147" gene complement(3160651..3161481) /locus_tag="PA2806" /db_xref="GeneID:880562" CDS complement(3160651..3161481) /locus_tag="PA2806" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="7-cyano-7-deazaguanine reductase" /protein_id="NP_251496.1" /db_xref="GeneID:880562" /translation="MQHPAEHSPLGKTSEYVSSYTPSLLFPISRTAKWAELGLSAETL PYRGVDIWNCYELSWLTPAGKPVVAIGEFSIPADSPNIIESKSFKLYLNSLNQSAFDS REALRAVLQKDLSAAVGAPVGVRLRSLDEVAEEGIGRLPGRCIDELDIAVDGYEQPRP ELLRCDAGRIVEEQLYSHLLKSNCPVTGQPDWGTLVVDYRGPALDPASLLAYLVSFRQ HQDFHEQCVERIFLDLQRLLQPQALSVYARYVRRGGLDINPYRSLAEVAPDNRRLVRQ " misc_feature complement(3160654..3161472) /locus_tag="PA2806" /note="7-cyano-7-deazaguanine reductase; Provisional; Region: queF; PRK11792" /db_xref="CDD:236986" gene complement(3161599..3162216) /locus_tag="PA2807" /db_xref="GeneID:880563" CDS complement(3161599..3162216) /locus_tag="PA2807" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251497.1" /db_xref="GeneID:880563" /translation="MLPTASRQAQRHRIGDINPMEIPRMFPRRLLPASLIVLGVLFGA SAQASPAHGQAFGKPAQAAQASRSIEVVLGDMYFKPRAIEVKAGETVRFVLKNEGKLL HEFNLGDAAMHAEHQKEMLEMQQSGMLTPTGMASMDHSQMGHGMADMDHGRMMKHDDP NSVLVEPGKSAELTWTFTKATRLEFACNIPGHYQAGMVGQLTVQP" misc_feature complement(3161605..3162135) /locus_tag="PA2807" /note="Uncharacterized copper-binding protein, cupredoxin-like subfamily [General function prediction only]; Region: COG4454" /db_xref="CDD:443552" gene complement(3162388..3162579) /gene="ptrA" /locus_tag="PA2808" /db_xref="GeneID:878671" CDS complement(3162388..3162579) /gene="ptrA" /locus_tag="PA2808" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="repressor PtrA" /protein_id="NP_251498.1" /db_xref="GeneID:878671" /translation="MRTFTASTLAFLLVLAPTVPAMADSGGDIVFERMQAQAAKARAA HQEKLAKQAEATKKDKENC" misc_feature complement(<3162478..3162579) /gene="ptrA" /locus_tag="PA2808" /note="Protein of unknown function (DUF2790); Region: DUF2790; cl12550" /db_xref="CDD:472325" gene 3162705..3163385 /gene="copR" /locus_tag="PA2809" /db_xref="GeneID:878672" CDS 3162705..3163385 /gene="copR" /locus_tag="PA2809" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="two-component response regulator CopR" /protein_id="NP_251499.1" /db_xref="GeneID:878672" /translation="MKLLIVEDEPRIGQYLRQGLAEAGFAVDLSDDGNEGEQLALGGD YDLLILDVMLPGRDGWQILRSVRDAGMTVPVLFLTARDAVEDRVRGLEQGADDYLVKP FAFVELLARVRTLLRRGSQQLQETTLQLADLELDLLRRRVQRQGKRIDLTAKEFALLE LLLRRSGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRAKVDDDYPQRLIHTVRGMG YVLEERDE" misc_feature 3162711..3163367 /gene="copR" /locus_tag="PA2809" /note="heavy metal response regulator; Region: cztR_silR_copR; TIGR01387" /db_xref="CDD:130454" gene 3163382..3164713 /gene="copS" /locus_tag="PA2810" /db_xref="GeneID:880411" CDS 3163382..3164713 /gene="copS" /locus_tag="PA2810" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="two-component sensor CopS" /protein_id="NP_251500.1" /db_xref="GeneID:880411" /translation="MSAGFGSRMSLGVRLSLLFAACTAAVSLIAGLIFSRAIDEHFVE LDHMAMSAKLAVFRDELRGLGSEQQMRRREAELLRELARHPDLGLRLNGPDGNLWFER LPQPAHPGLPANRELGAPLEPGNDASPRLTVILDISHHQHFLQRMRQLIWLTMSLSAL ATALLGAWATGASLAPLRRMREVAARVSANSLTTRLDASRMPEELRGLAGELNAMLAR LEEAFQRLSAFSADIAHELRTPLTSLLTQTQVVLSRPRSLEDYREALHGNLEELERLT AMVNDMLLLAKADHGLLAPSRQALDLGAEVDSLLEFYQPLAEDRDIRLLREGSLSLPG DRGMLRRVLANLLDNALRFTADGGEIRIRLGDRRLSVENQGPAIPPERLPRLFDRFYR ADPARREGQGEHAGLGLAICRSIVQAHGGEIRCESADGWTRFVIDFARPRR" misc_feature 3163403..3164698 /gene="copS" /locus_tag="PA2810" /note="heavy metal sensor kinase; Region: cztS_silS_copS; TIGR01386" /db_xref="CDD:273593" gene complement(3164763..3165542) /locus_tag="PA2811" /db_xref="GeneID:880412" CDS complement(3164763..3165542) /locus_tag="PA2811" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_251501.1" /db_xref="GeneID:880412" /translation="MSSELSANLVALNTIVYREVRRFTRIWPQTLLPPAITMVLYFVI FGNLIGRQIGDMGGFTYMEYIVPGLIMMSVITNAYGNVVSSFFGSKFQRSVEELLVSP VSPHTILLGYTIGGVLRGLAVGVIVTMLSLFFTKLQVHHLGITVLVVVLTATIFSLGG FINAVFARNFDDISIIPTFVLTPLTYLGGVFYSINLLPPFWQTVSLANPILHMVNAFR YGILGVSDIRIGVAIGFMLLATAVLYLGCVRLLVSGRGMRQ" misc_feature complement(3164766..3165536) /locus_tag="PA2811" /note="inner membrane transport permease; Provisional; Region: PRK15066" /db_xref="CDD:237896" gene complement(3165539..3166471) /locus_tag="PA2812" /db_xref="GeneID:880277" CDS complement(3165539..3166471) /locus_tag="PA2812" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_251502.1" /db_xref="GeneID:880277" /translation="MSSALSIRQLTKTYGNGFQALKGIDLDVAEGDFFALLGPNGAGK STTIGILSTLVNKTSGSVSVFGHDLDKDPAGLKRCLGVVPQEFNFNQFEKVFDIVVTQ AGYYGIPAKIAKERAERYLTQLGLWDKRNEASRMLSGGMKRRLMIARALVHQPRLLIL DEPTAGVDIELRRSMWSFLTELNQEGISIILTTHYLEEAEQLCRNIAIIDHGEIVQNT SMRDLLMTLHSETFLLDLKNVQALPPTLDGYPTRLVDDHTLEVQVEKSQGINDLFAQL GAQGIEVLSLRNKTNRLEELFVSLVEKNLTRIAR" misc_feature complement(3165800..3166459) /locus_tag="PA2812" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" gene complement(3166547..3167167) /locus_tag="PA2813" /db_xref="GeneID:880278" CDS complement(3166547..3167167) /locus_tag="PA2813" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutathione S-transferase" /protein_id="NP_251503.1" /db_xref="GeneID:880278" /translation="MLTIWGRKNSSNVRKALWCAEEAGLEYRTVDAGGAFGLVDEPAF RAMNPNGRVPVIEDDGFVLWESNAIVRYLAARYAPGDLYPQDPVRRADADKWMDWTTS TLAGPFRDLFWGTLRTPPEQRDEALIAKALQTCGELLRVPDQTLAGQPWLSGERFGMG DIPLGCFIYAWFEMPIERPPLPHLEAWYLRLRERPAFRTAVMTELT" misc_feature complement(3166556..3167167) /locus_tag="PA2813" /note="Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]; Region: GstA; COG0625" /db_xref="CDD:440390" gene complement(3167282..3167953) /locus_tag="PA2814" /db_xref="GeneID:882804" CDS complement(3167282..3167953) /locus_tag="PA2814" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251504.1" /db_xref="GeneID:882804" /translation="MQSYLQSGRFVDSDHPVVVEFAEKSRGNSAKPRDQAVALYYAVR DGVRYNPYVFSRDPQTLKASHALQQGESYCVPKAILLAACARHCRIPARIGLADVRNH LATPRLLEALRSEVFAMHGYTELYLEGRWVKATPAFNRALCRAFDVAPLEFDGVADSV FHPFNRQGERYMEYLADHGQFADLPEELFFSHLQQHYPHLFSGRPLALDGDFQAEAGQ DEGRR" misc_feature complement(3167543..>3167950) /locus_tag="PA2814" /note="Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]; Region: YebA; COG1305" /db_xref="CDD:440916" gene 3168106..3170553 /locus_tag="PA2815" /db_xref="GeneID:882805" CDS 3168106..3170553 /locus_tag="PA2815" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_251505.1" /db_xref="GeneID:882805" /translation="MLLLWLVVLVLGVAYLAHRRTPPAPALGISAAYLILMGVFSHAP GWLLLVFWLLWLAVALPLALPDLRRRVLSGPLFAWFQKVLPPMSDTEREAIEAGTVWW DGELFSGRPDWQKLLDYPKAQLTEEEQAFVDGPTEELCAMVSDWDIGQRMDLPEEAWA FIKQHGFFGLIIPKEYGGKGFSAFAHSQVVMKLATRSGDLASTVMVPNSLGPAELLLH YGTDEQRQRYLPSLAKGDDIPCFALTGPYAGSDAGGMTDVGIVCKGEWEGREVLGLRL TWEKRYITLGPVATLLGLAFKCHDPDHLLGDEEDLGITLALIPTDTPGVEIGRRHVPL GAAFMNGPNSGKDVFVPLEYIIGGQEMIGKGWMMLMNCLSVGRSISLPAVGTSAGKAS SYVSGRYAQVREQFNVPIAAFEGIQEALARIGGNAWLMDSARILTANAVDLGEKPSVL SAILKYHLTERGRECIAHAMDIHGGKGIIMGPNNYLGRSWQGAPIFITVEGANILSRN LMIFGQGAIRCHPYVLKEMELAQREDKDQAAREFDALLVKHIGFAVGNAASSFLLSLS CGHLGNAPGDRISRPYFRALNRLAASFALLADFSMMLLGGELKRKERLSARLGDVLSY LYLGSAALKRYHDLGNPDYLHPLLRWAMEENLGKAEAALEDLLNNFPSRFFGCALKVL VLPFGRRHKGPGDELDAEIAEILGRPDDDPALQAILAGAFLPKDPQDPVGALAHAFDA VRESAALEKTLHKAIKEGRVQPQAGQNPIDAGAAAGVLSAEQAQALHQAEAARRKVID VDDFAKEELQLADGRIR" misc_feature 3168274..3170538 /locus_tag="PA2815" /note="acyl-CoA dehydrogenase; Reviewed; Region: fadE; PRK09463" /db_xref="CDD:236528" gene 3170682..3171062 /locus_tag="PA2816" /db_xref="GeneID:877872" CDS 3170682..3171062 /locus_tag="PA2816" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251506.1" /db_xref="GeneID:877872" /translation="MLKLFATGLAASFLLLPPAQAAPPAPYGVQPHQQAVQRAGEQRQ RQLQEQRQRFDEQRLQLQQDQLQRQQQNLQRQRQQRQMQDNLIRQQQLDQQRWRLEQD QRRLDSERRQLENRRRQSQSPAIR" misc_feature <3170769..3171059 /locus_tag="PA2816" /note="PA2816 family glutamine-rich protein; Region: PA2816_fam; NF041511" /db_xref="CDD:469397" gene 3171121..3171531 /locus_tag="PA2817" /db_xref="GeneID:877873" CDS 3171121..3171531 /locus_tag="PA2817" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251507.1" /db_xref="GeneID:877873" /translation="MANSYLEHHLALLQHLRNILGALGEAEQVPEENHGLFLERFDEL MDELPRDPEGAQYLGQDLISQVFHRYPQIAHLVPRDLLWFFGGDCLHFMPDEEIDLFQ RLDERRYEAEERGETFDWNREKQLLALPEDSPRH" misc_feature 3171121..3171528 /locus_tag="PA2817" /note="PA2817 family protein; Region: PA2817_fam; NF041512" /db_xref="CDD:469398" gene complement(3171598..3173175) /gene="arr" /locus_tag="PA2818" /db_xref="GeneID:878909" CDS complement(3171598..3173175) /gene="arr" /locus_tag="PA2818" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="aminoglycoside response regulator" /protein_id="NP_251508.1" /db_xref="GeneID:878909" /translation="MQIGRPRRDSLFHFGIVVAALAAVPLLMAPLVYQQARMRAEGEA AVTSVAILRQLDTLLGVVSDSLDKSQEAVGKPCREVLGRLTRMTMLSPYFRSLVLVER ESVYCSSLRGELHDLPLQVAFKALGSLPAGQRITPSNATPQVPERASVIMSRGDENGS GVLAIIDGQYLLDIQQAASYDERFQVQMVLRQSQRQLPGGAPATGDGVAVAASARFPV EVRVAVAPALASAYRADAWRHYAPFILLAALLAGYLAHLFCRRRLSLVGDMYRAMRAR EFHMVYQPIIHLDTGECRGVEALVRWQRPDRSQVRPDIFIPLAEDNGMIGDLTRHIFG LVAADLAQLGLGAGDHLGVNVSGSHLASHGFVDDVRRLLGAIGSEGPQLVLEVTEREA LPHDAQLQHNIQQLRELGVQWALDDFGTGQSSLSHLQKLHADFLKIDRSFVSSVGSGS VNAVVLETIIALAQRLDLAMTAEGIETREQEQYLCGHSIQWGQGYLFSPPLKAAELWA WRNSRRGAEREARVAAS" misc_feature complement(3171616..3173175) /gene="arr" /locus_tag="PA2818" /note="Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains [Signal transduction mechanisms]; Region: YjcC; COG4943" /db_xref="CDD:443970" gene complement(3173599..3173674) /locus_tag="PA2819.1" /db_xref="GeneID:3240210" tRNA complement(3173599..3173674) /locus_tag="PA2819.1" /product="tRNA-Gly" /db_xref="GeneID:3240210" gene complement(3173759..3173834) /locus_tag="PA2819.2" /db_xref="GeneID:3240217" tRNA complement(3173759..3173834) /locus_tag="PA2819.2" /product="tRNA-Gly" /db_xref="GeneID:3240217" gene complement(3173837..3173912) /locus_tag="PA2819.3" /db_xref="GeneID:3240234" tRNA complement(3173837..3173912) /locus_tag="PA2819.3" /product="tRNA-Glu" /db_xref="GeneID:3240234" gene 3174131..3174904 /locus_tag="PA2820" /db_xref="GeneID:879867" CDS 3174131..3174904 /locus_tag="PA2820" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251510.1" /db_xref="GeneID:879867" /translation="MSPLLITALIIGGIALLIAIGYINHVVENSKLEKARLKAELNDR VRRCAQISESLPGQFVSPSLKLLMSQIELSLSEQQLALQKKADAGLKARIEELRALVA KGESIPVRNPPQAILTEDKAKEVRFLFEALHAQLTRFTQDGHLPRSEAQIWVKEIRHL LVRLHIEFFGNLGQQALQQNEPRQARLAFERGAQYLRKQPELARYQAELQQMETQLAR ANAMVLNNSQPASEEPSELNEGLKALDADDLWKKKNVYD" gene 3174966..3175628 /locus_tag="PA2821" /db_xref="GeneID:879868" CDS 3174966..3175628 /locus_tag="PA2821" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutathione S-transferase" /protein_id="NP_251511.1" /db_xref="GeneID:879868" /translation="MSLTLYGAPLSPFVRKVRLLLAEKGLDYQLEAIAPFGQPAWYRE ISPLGRIPALRDGDLALADSSVICQYLEERYPEPPNLQGDAPASRAAVRWLEKYADYE IAPLATLTIFRNRILKPAMGQACEENDVRRALEEKLPAHFDYLENHLDGRAFFVGERL TLADLAIASQLVNLRHAGENLDEQRWPALAAHFARMLERPAMQALLPGERRTLDKLAA KA" misc_feature 3174972..3175607 /locus_tag="PA2821" /note="Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]; Region: GstA; COG0625" /db_xref="CDD:440390" gene complement(3175638..3176120) /locus_tag="PA2822" /db_xref="GeneID:878676" CDS complement(3175638..3176120) /locus_tag="PA2822" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251512.1" /db_xref="GeneID:878676" /translation="MIDLQQSGAGLAGYALLAAQAEALFADERDFIANAAQFSAFLFH ELGDLNWAGFYLNRNEELVLGPFQGKVACVRIPFSKGVCGAAARTRLTQRVDDVHAFP GHIACDSASSSELVVPLIKDGRLVAVLDLDSPSVGRFSAEDQAGIEGLVEIFLRLTDC " misc_feature complement(3175644..3176042) /locus_tag="PA2822" /note="GAF domain-containing protein, putative methionine-R-sulfoxide reductase [Defense mechanisms, Signal transduction mechanisms]; Region: MsrC; COG1956" /db_xref="CDD:441559" gene complement(3176117..3177007) /locus_tag="PA2823" /db_xref="GeneID:878677" CDS complement(3176117..3177007) /locus_tag="PA2823" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251513.1" /db_xref="GeneID:878677" /translation="MDSRLSDFLARAESVLARLEPLLPAVREAVDWERSLAARWHRDG RSGYLQPLEVSLDLRLADLLGVERQREQLERNTRQFVAGQPANHALLWGARGTGKSSL VRALLAELAGAGLRLIEIERDHLADLPRVVEQLQGLPQRFVLFCDDLSFDAGEGDYRV LKSVLDGSLEQAPENVLLYATSNRRHLVSEKQSDNENWKMVDGELHPNEAVEDKIALS DRFGLWLSFYPFTQEHFLSVVHHWVDVLAEKAGLAWSWSEELEKEAIRWALGRGNRNG RCAYQFSRYWVGKQLLERQA" misc_feature complement(3176123..3176998) /locus_tag="PA2823" /note="Predicted ATPase, AAA+ superfamily [General function prediction only]; Region: Atu1564; COG2607" /db_xref="CDD:442019" gene 3177090..3179450 /locus_tag="PA2824" /db_xref="GeneID:878885" CDS 3177090..3179450 /locus_tag="PA2824" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sensor/response regulator hybrid protein" /protein_id="NP_251514.1" /db_xref="GeneID:878885" /translation="MLGGRTSPRLIPAPMDIALTHRLSFKQASLTVLVAFILGTLLSL IQVGVDYASQDASINREVRALLDVSHNPAARIAYNIDAELAQELVLGLLRSPAVVRAE IIDTSGLPLASASREPAESRLRPLSDFLFGHKRVYEDPLHVDHAPGEALGVLHLEIDT FVFGNDFLRRAGITLLSGFVRSLLLSLILLVLFYTLLTKPLVSLIQALSGHDPRSPAR MRLPCPKGHERDEIGVLVEVINRQLGRISVEIEQRREAENRLTQYLEELESIVAARTA ELKAANARLTLSNQELEEARQTALDMAQARASFLANMSHEIRTPLNGLLGMLSLSLDG PLTPEQRQQLSIAHDSGKVLVELLNDVLDLSKFEAGQLVLEQIPFDLGVLVEDTASLL SQNAAAGVELTCLVDPALPAQVSGDPTRIRQIVSNLLSNALKFTRLGRVDVRVEATAE GVRISVRDTGIGIAQEALDRIFQPFTQADAGITRQYGGTGLGLALTRKLCEAMQGELT VESTVGLGSLFSVGLPLAPVSPPLQALPLRGRVIAQCSANSGLAQLLQTWLPRWGLEY KRLETDDSLLGHSLDVLISDCPDCLMGLRPSIGTPILLVTAYGSFLEPELARRLSPLR QLARPLSRNQLYQALKHVLEHTAIAPSSASDTTGEQRNTRVLLVEDNPVNQLVAKGLL HKLGCQVWIAEHGLNALKMLEEHPIDLVLMDCNMPVMDGYEATRQIRDSGRWGGLPII ALTANALPDERERCRAAGMDDYLAKPFHRDELKAILDRWCPLTASD" misc_feature 3177174..>3177812 /locus_tag="PA2824" /note="biofilm formation regulator HmsP; Provisional; Region: PRK11829" /db_xref="CDD:183329" misc_feature <3177867..3179438 /locus_tag="PA2824" /note="hybrid sensory histidine kinase BarA; Provisional; Region: PRK11107" /db_xref="CDD:236848" gene complement(3179469..3179960) /gene="ospR" /locus_tag="PA2825" /db_xref="GeneID:878886" CDS complement(3179469..3179960) /gene="ospR" /locus_tag="PA2825" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251515.1" /db_xref="GeneID:878886" /translation="MSTRGKVARPDGVEESLLLDNQLCFKLYAASRAVIRGYRPLLEQ IGLTYPQYLVMLVLWEWHASPPEQPTVKALGDRLLLDSGTLTPLLKRLEQLGLVDRRR ASHDEREVHLTLTVPGITLRERVIPLRQQLICSTGFDLNEMFDLHQRLGGLLSRFRLV VGG" misc_feature complement(3179562..3179921) /gene="ospR" /locus_tag="PA2825" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" gene complement(3179957..3180442) /locus_tag="PA2826" /db_xref="GeneID:878841" CDS complement(3179957..3180442) /locus_tag="PA2826" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutathione peroxidase" /protein_id="NP_251516.1" /db_xref="GeneID:878841" /translation="MSDSLLSIPCTTIKGEQKTLADFGGKALLVVNTASKCGFTPQYQ GLEALWEKYRERGLVVLGFPCNQFGKQEPGDEGEISQFCELNYGVSFPLFRKIEVNGA GAHPLFVSLKKRAPGLLGSQGIKWNFTKFLIGRDGQVVKRYAPTTKPEELSSAIEALL E" misc_feature complement(3179963..3180433) /locus_tag="PA2826" /note="Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid transport and metabolism]; Region: BtuE; COG0386" /db_xref="CDD:440155" gene complement(3180554..3180952) /locus_tag="PA2827" /db_xref="GeneID:878842" CDS complement(3180554..3180952) /locus_tag="PA2827" /EC_number="1.8.4.12" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="methionine sulfoxide reductase B" /protein_id="NP_251517.1" /db_xref="GeneID:878842" /translation="MSKIDKPLDSWREELTEEQFHICRLGGTERAFSGEYHATKTPGI YHCTCCGTALFDSDAKYDSGSGWPSYFQPVDAEAVRELDDFSHGMHRIEVRCGRCDAH LGHVFPDGPRPTGLRYCINSASLKLVPRES" misc_feature complement(3180560..3180952) /locus_tag="PA2827" /note="Peptide methionine sulfoxide reductase MsrB [Posttranslational modification, protein turnover, chaperones]; Region: MsrB; COG0229" /db_xref="CDD:439999" gene 3181137..3182348 /locus_tag="PA2828" /db_xref="GeneID:878850" CDS 3181137..3182348 /locus_tag="PA2828" /EC_number="2.6.1.2" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_251518.1" /db_xref="GeneID:878850" /translation="MQVSKSNKLANVCYDIRGPVLKHAKRLEEEGHRILKLNIGNPAP FGFEAPEEILQDVIRNLPTAQGYSDSKGLFSARKAVMQYYQQKQVEGVGIEDIYLGNG VSELIVMSMQALLNNGDEVLIPAPDYPLWTAAVSLAGGKPVHYLCDEQANWWPDLEDI KAKITPNTRAMVIINPNNPTGAVYSREVLEGMVELARQHNLVLFSDEIYDKILYDGAV HVSTASLAPDVLCLTFNGLSKSYRVAGFRSGWVAISGPKQRAQSYIEGLDILANMRLC ANVPAQHAIQTALGGYQSINDLVLPPGRLLEQRNRAWELLNDIPGVSCVKPMGALYAF PRIDPKVCPIHNDEKFVLDLLLSEKLLIVQGTAFNWPWPDHFRVVTLPRVDDLEQAIL RIGSFLKGYQQ" misc_feature 3181137..3182345 /locus_tag="PA2828" /note="aminotransferase AlaT; Validated; Region: PRK09265" /db_xref="CDD:181738" gene 3182400..3182852 /locus_tag="PA2829" /db_xref="GeneID:878851" CDS 3182400..3182852 /locus_tag="PA2829" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251519.1" /db_xref="GeneID:878851" /translation="MDLQIDDFHKDAAGGLLLLYQAFPRKTALYVEDLIGREAPDEFG LPSKRHQSCLGALLWLAEEGYLRFANTIHYEALDQAVLSEKAFLRLTRIVPRAAAALA EAPASVRREQASLANQLRQALAQGDGERLAGLTRLLFEGNLGAQGDTV" gene 3182986..3183861 /gene="htpX" /locus_tag="PA2830" /db_xref="GeneID:882810" CDS 3182986..3183861 /gene="htpX" /locus_tag="PA2830" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="protease HtpX" /protein_id="NP_251520.1" /db_xref="GeneID:882810" /translation="MMRILLFLATNLAVLVIASITLKLLGVDRFTGQNYGSLLVFCAV FGFAGSLVSLFISKWMAKMSTGTEVISQPRTRHEQWLLQTVEELSREAGIKMPEVGIF PAYEANAFATGWNKNDALVAVSQGLLERFSPDEVKAVLAHEIGHVANGDMVTLALIQG VVNTFVMFFARIFGNFVDKAILKNEDGPGIGYFVATIFAELVLGILASIIVMWFSRRR EFRADAAGAHLAGTGAMIAALQRLRSEQGVPVQMPDTLNAFGINGGLKHGLAGLLMSH PPLEDRIEALRASAR" misc_feature 3182986..3183852 /gene="htpX" /locus_tag="PA2830" /note="protease HtpX; Region: PRK05457" /db_xref="CDD:235478" gene 3184002..3185129 /locus_tag="PA2831" /db_xref="GeneID:882811" CDS 3184002..3185129 /locus_tag="PA2831" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251521.1" /db_xref="GeneID:882811" /translation="MQIRADFDSGNIQVIDASDPRRIRLAIRPDLASQHFQWFHFKVE GMAPATEHCFTLVNAGQSAYSHAWSGYQAVASYDGERWFRVPSQYDADGLHFQLEPEE SEVRFAYFEPYSRERHARLVERALGIEGVERLAVGTSVQGRDIELLRVRRHPDSHLKL WVIAQQHPGEHMAEWFMEGLIERLQRPDDTEMQRLLEKADLYLVPNMNPDGAFHGNLR TNAAGQDLNRAWLEPSAERSPEVWFVQQEMKRHGVDLFLDIHGDEEIPHVFAAGCEGN PGYTPRLERLEQRFREELMARGEFQIRHGYPRSAPGQANLALACNFVGQTYDCLAFTI EMPFKDHDDNPEPGTGWSGARSKRLGQDVLSTLAVLVDELR" misc_feature 3184008..3184331 /locus_tag="PA2831" /note="Cytosolic carboxypeptidase N-terminal domain; Region: Pepdidase_M14_N; pfam18027" /db_xref="CDD:407865" misc_feature 3184338..3185102 /locus_tag="PA2831" /note="Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases similar to Pseudomonas aerugnosa CCP (PaCCP); Region: M14_PaCCP-like; cd06234" /db_xref="CDD:349453" misc_feature order(3184500..3184502,3184509..3184511,3184653..3184655, 3184680..3184685,3184779..3184781,3184917..3184919, 3185004..3185006) /locus_tag="PA2831" /note="active site" /db_xref="CDD:349453" gene complement(3185161..3185817) /gene="tpm" /locus_tag="PA2832" /db_xref="GeneID:882816" CDS complement(3185161..3185817) /gene="tpm" /locus_tag="PA2832" /EC_number="2.1.1.67" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="thiopurine S-methyltransferase" /protein_id="NP_251522.1" /db_xref="GeneID:882816" /translation="MQADFWHARWANNQIGFHLDEINPYLMRHLSRLRLQAGEQILVP LCGKTLDLAWLAAQGLEVLGVELSEKAVSDFFEEHDLHPEIDQLDGFRRYRVAGITLL QGDFFALQAEHLAQCRAFYDRAALIALPPEMRERYAGHLQAVLPTRSLGLLVTIDYPQ AEMAGPPFAVPDEEVRGYYAGGWRIEELERGDVLGVNWKFLERGVSWLDEAVYLLERG " misc_feature complement(3185164..3185817) /gene="tpm" /locus_tag="PA2832" /note="thiopurine S-methyltransferase; Reviewed; Region: PRK13255" /db_xref="CDD:183921" gene complement(3185873..3186319) /locus_tag="PA2833" /db_xref="GeneID:882817" CDS complement(3185873..3186319) /locus_tag="PA2833" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251523.1" /db_xref="GeneID:882817" /translation="MFHTLLVAIDGGPQTRRIAELARQAAAPGARVHLLCAVDAGYAL PGRPTLLDYPPAAHECEEARQVLDEARALLAGCELEVRAELRAGDPVQVILGEARRLG CELIVIGHRHLGRLERLLDPSVGDRVIREAPCPVLVEVREGDAQGS" misc_feature complement(3185906..3186319) /locus_tag="PA2833" /note="Nucleotide-binding universal stress protein, UspA family [Signal transduction mechanisms]; Region: UspA; COG0589" /db_xref="CDD:440354" gene 3186449..3187408 /locus_tag="PA2834" /db_xref="GeneID:882806" CDS 3186449..3187408 /locus_tag="PA2834" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251524.1" /db_xref="GeneID:882806" /translation="MPACLYFHSMHLPDLNLLVALNVLLEEGSVVGAARRMHLSPPAM SRTLSRIREAVGDPIMVRAGRKLVPTPRALELQEQVRQLVDQARDLFNTRETIQLDKL ERCFTLRSNNTLVGGLSIRLLEIFAEEAPRCTLRFVQESDIDDEALRQNRIDLYIGAS SWMEPEVKTQQLLTTRFVGLARQGHPIFDGEITPQRFVAFPHIAVSRRGLNHGPLDQA LGELGLKRDVKLISPTFHSAIFALPGSDLLLPIAEHSLWRANRLGLGLRQFDIPVPLK TVMVVQAWHPRFDNDPAHRWFRQTIKRICEEVQSDPHPLLGSN" misc_feature 3186524..3186667 /locus_tag="PA2834" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 3186761..3187363 /locus_tag="PA2834" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to DntR, which is involved in the catabolism of dinitrotoluene; contains the type 2 periplasmic binding fold; Region: PBP2_DntR_like_1; cd08460" /db_xref="CDD:176149" misc_feature order(3186779..3186781,3186785..3186790,3186800..3186802, 3186971..3186973,3187082..3187084,3187286..3187288) /locus_tag="PA2834" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176149" misc_feature order(3186782..3186784,3186791..3186796,3186803..3186808, 3186815..3186820,3186824..3186829,3186836..3186841, 3186845..3186859,3186863..3186865,3187049..3187051, 3187133..3187147,3187154..3187159,3187166..3187171, 3187178..3187180,3187220..3187222) /locus_tag="PA2834" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176149" gene 3187546..3189138 /locus_tag="PA2835" /db_xref="GeneID:882807" CDS 3187546..3189138 /locus_tag="PA2835" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_251525.1" /db_xref="GeneID:882807" /translation="MTSLATPLGQPTPTAAPAAQPFGTRIVVGLLGVLLASLTAGLNG HVTEIAMTDVRGALAIGHDEGTWLTVLYEATQVAAMAFAPWCSVTFSLRRFTLFAIGG FALLALLCPFAPNLESLLVLRTLQGLMAGCLPPMLMTVALRFLPPGIKLYGLGAYALT ATFGPNLGLPLAAFWFEYVGWQWVFWQVIPLCLVAMAAVSHGIPQDPVRLERFRQFDG IGLLTGFPAICALVIGLLQGERLDWFESPLICLLLGSGSLLLGLFLVNEWSHPLPFFR LQLLKRRNLTFALITLAGVLVVLGASMGVPTEFLAEIRGYRPLQSVPMVLLVALPQLV ALPLVAALCNIPRVDCRWVLACGLCLCAGACLSFSQLTADWVREDFYLPMLLLVVGQP MAVIPLLMLSTSVIAPIEGPFASAWFNTVRGFSGVVATAVIGALGTAREHYHSNRLVD HLGNAPQAVELRLQQIAGLQPGADSGAHWQHLAEQARQQAQVLGNADVLLAMAGLACA LLILIPILPQRAYPPRPVAPTH" misc_feature 3187642..3188916 /locus_tag="PA2835" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" misc_feature order(3187663..3187668,3187675..3187680,3187687..3187689, 3187783..3187785,3187933..3187938,3187942..3187950, 3187957..3187959,3188017..3188019,3188026..3188031, 3188038..3188040,3188419..3188421,3188428..3188433, 3188440..3188448,3188455..3188457,3188539..3188541, 3188551..3188553,3188713..3188718,3188728..3188730, 3188740..3188742,3188788..3188790,3188797..3188802, 3188809..3188814,3188821..3188823) /locus_tag="PA2835" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:349949" gene 3189150..3190214 /locus_tag="PA2836" /db_xref="GeneID:882819" CDS 3189150..3190214 /locus_tag="PA2836" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="secretion protein" /protein_id="NP_251526.1" /db_xref="GeneID:882819" /translation="MSFITSRKGSLLLAALLVLTLLVYLLFHLLAPRVVQSTDDAYVH ADFTLVAPKVAGFVQDVLVEDNQPVKAGQLLARLDDRDFRTALAAAEADVLGAEANLA NAEANLQRQQALIEQARAKVRAEQAELVFARHEQSRYQTLASKGAGSLQNAQQAQSRI DTASARLAEGQAAVDATRKQVSVLEARVGQARGDLQRMQARRDQARLDLSYCELRAPF DGQVGRRQLRVGAYVTPGSALLAVVPLQQAYVVGNFQETQLTHVSPGQAVEIRVDTFP GEVLRGHVDSIAPATGLSFAPIAPDNATGNFTKVVQRIPVKIVLEPRQAMAGKLRVGM SVEARIDTATGTRSAEVAQQ" misc_feature 3189246..3190175 /locus_tag="PA2836" /note="Multidrug resistance efflux pump EmrA [Defense mechanisms]; Region: EmrA; COG1566" /db_xref="CDD:441174" gene 3190211..3191650 /locus_tag="PA2837" /db_xref="GeneID:882820" CDS 3190211..3191650 /locus_tag="PA2837" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251527.1" /db_xref="GeneID:882820" /translation="MKGTPLLLIASLALGACSLGPDFTRPDRPAPGEWSLQAAAGNPS HLAAAPLAAQWWTLFDDAQLNALLQRVQRANLDLRSAAARLQQSRAIRRSLGGDALPS VDASGNYQRQRTTSAGLFDPSGKAGKGNYNHALAGFDASWELDFWGRVRRELEAADAT VEASENELRDVQVSVLAEAARDYIQLRGEQNRAAIIRDNLETARRSLELTRTRLANGV ATDLEVAQALAQVASMEARLPEVEKNQAHLVNALGYLVGASPGSLLAELGPARAIPRP PGSVPVGLPSELAQRRPDIRRAEARLHAATASIGVAKADFYPRITLNGNFGFESLQLS SLGDWDHRQFAIGPAFSLPIFEGGRLRGRLELREAQQQEAAIDYQRTVLRAWQEVDDA MHDYAANQRRQERLGEAVAQNRRALQSAREQYRAGAVDFLSVLDSQRQLLDNQEQQVA SDEAVSLTLVNLYKALGGGWSPTSDPASG" misc_feature 3190232..3191617 /locus_tag="PA2837" /note="efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; Region: outer_NodT; TIGR01845" /db_xref="CDD:273830" gene 3191687..3192658 /locus_tag="PA2838" /db_xref="GeneID:878977" CDS 3191687..3192658 /locus_tag="PA2838" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251528.1" /db_xref="GeneID:878977" /translation="MDLLQGIRTFVRVVEHGSFTQAAQALGTSPATVSRQVAGLEQAL SARLLQRNTRSVVVTESGLRYYEHCKQILRTVAAAAADVEDSQSHASGRLRLHAVTEL GLEHLMPLLVDYLDGHPDVSVDLTLAQGTPALLEEGLDVLITLGRTLPDSTLVARDLG QVFSVVCAAPEYLARHGVPRTPEDLLRHRCLNVAAPSCPQGWAFVGERGETLLDLDEA LKVNLPEAACAAAAAGLGVCLLPGFVAARALQEGSLLRLLPGHRLHVREVFVLYSSRR YLDAKIRTWVDFLRERLPLAFERDRAILDDRRYWAESPTGVARETAT" misc_feature 3191687..>3192151 /locus_tag="PA2838" /note="selenium metabolism-associated LysR family transcriptional regulator; Region: LysR_Sec_metab; NF040786" /db_xref="CDD:468737" misc_feature 3191960..3192553 /locus_tag="PA2838" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(3191990..3191992,3192002..3192004,3192119..3192121, 3192164..3192166,3192170..3192172,3192356..3192358, 3192407..3192409,3192488..3192490) /locus_tag="PA2838" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature order(3191993..3191998,3192008..3192013,3192017..3192022, 3192029..3192031,3192041..3192043,3192047..3192067, 3192251..3192253,3192338..3192352,3192371..3192376, 3192383..3192385) /locus_tag="PA2838" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 3192749..3193519 /locus_tag="PA2839" /db_xref="GeneID:878978" CDS 3192749..3193519 /locus_tag="PA2839" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251529.1" /db_xref="GeneID:878978" /translation="MLPTLYISHGSPMLALEPGASGVQLRRLATELPRPKAILVVSAH WESDDLRVTGAAVPDIWHDFYGFPPPLYAVRYPAKGEPALAQRTIELLQAAGLPAQAD PQRPFDHGTWVPLSLMYPQADIPVLQLSLPSRLGPALQSRVGQALRQLRGEGVLLIGS GSITHNLGELDWRAGPEAIAPWAREFRDWMVEKLQADDEAALHDYRRQAPWAARNHPS DEHLLPLFFARGAGGGGMRVEHSGFTLGSLGMDIYRFD" misc_feature 3192755..3193513 /locus_tag="PA2839" /note="The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine; Region: 45_DOPA_Dioxygenase; cd07363" /db_xref="CDD:153375" misc_feature order(3192773..3192781,3192878..3192880,3193073..3193075, 3193241..3193243,3193409..3193411,3193487..3193492) /locus_tag="PA2839" /note="putative active site [active]" /db_xref="CDD:153375" misc_feature order(3192773..3192775,3192878..3192880,3193409..3193411) /locus_tag="PA2839" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:153375" gene complement(3193886..3195589) /locus_tag="PA2840" /db_xref="GeneID:882823" CDS complement(3193886..3195589) /locus_tag="PA2840" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase" /protein_id="NP_251530.1" /db_xref="GeneID:882823" /translation="MGLCGCIRGKPMTQETVGFAALGIHPNVLAAIVAVGYEEPSPIQ AQSIPLILEGHDMIGQAQTGTGKTAAFALPLLSRIDPSRREPQMLVLVPTRELALQVA TACETYSKQLPGVGVVAVYGGAPMGPQLKALRQGAQILVATPGRLCDHLRRDEKLLAT VQRLVLDEADEMLKLGFMDDLEVIFEALPESRQTVLFSATLPASIRGIAERHLKQPKH VKIAAKTQTVARIEQVHLMVHADQKAGSIQRLLEVEQFDALIAFVRTKQATLDYAELL ERQGYRAAALNGDMPQAQRERVIESLKDGSLDIVIATDVAARGLDVPRITHVLNIDMP YDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVIERVTGQKVGEVRLPDAETVLE ARLARLAASLTPLLDSAVEQRGAVRDELCRRLGCDAETLAAALLARLTAGKALDLESV RREQPLTPSAPRERADRGERGERPERSGERRPMAPPSEGRARCRTALGARDGVAAKNL LGAILNEGGLSREDIGRIQIRDTFSLIELPEANLERLLTKLKDTRVAGKALRLRRYRE D" misc_feature complement(3194345..3195535) /locus_tag="PA2840" /note="Superfamily II DNA and RNA helicase [Replication, recombination and repair]; Region: SrmB; COG0513" /db_xref="CDD:440279" misc_feature complement(3193901..3194116) /locus_tag="PA2840" /note="DbpA RNA binding domain; Region: DbpA; pfam03880" /db_xref="CDD:461082" gene 3195900..3196691 /locus_tag="PA2841" /db_xref="GeneID:882824" CDS 3195900..3196691 /locus_tag="PA2841" /EC_number="4.2.1.17" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="NP_251531.1" /db_xref="GeneID:882824" /translation="MNDTLPGRISRERRGHLLLLGLDRVAKRNAFDLPMLDDLVAALG EYEADDQLRCALLFAHGEHFTAGLDLANVGETFRQGWKLPEGAVDPWGTFGGRRPSKP LVVAVQGYCYTIGIELMLAADINLCASNARFAQLEVQRGILPFGGATLRMHQVAGWGN AMRWLLTGDEFDAHEAYRLGLVQEVTAPEDLLDHAIALAERVAAQAPLGVRATLGSAR QALLEGEAVAAAALPEAARRLLDSEDAKEGLRALQERRPGRFEGR" misc_feature 3195924..3196688 /locus_tag="PA2841" /note="crotonase/enoyl-CoA hydratase family protein; Region: PRK06563" /db_xref="CDD:180625" misc_feature order(3195981..3195983,3195987..3195989,3196083..3196085, 3196095..3196109,3196227..3196229,3196233..3196241, 3196305..3196310,3196317..3196319) /locus_tag="PA2841" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature order(3196101..3196103,3196239..3196241) /locus_tag="PA2841" /note="oxyanion hole (OAH) forming residues [active]" /db_xref="CDD:119339" misc_feature order(3196173..3196175,3196203..3196205,3196266..3196277, 3196311..3196322,3196338..3196340,3196344..3196352, 3196356..3196361,3196374..3196379,3196383..3196388, 3196392..3196397,3196404..3196406,3196437..3196439, 3196446..3196448,3196491..3196493,3196500..3196505) /locus_tag="PA2841" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene complement(3196717..3197466) /locus_tag="PA2842" /db_xref="GeneID:880258" CDS complement(3196717..3197466) /locus_tag="PA2842" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251532.1" /db_xref="GeneID:880258" /translation="MVSEERLLVEERDEYGVIRVIESGDYRFLEFGDGVEQSCVFMPD PAWLEYDYTRAMLLGGLCHSQPRRALFLGFGAGSLTQACLRHLPLEEAEAIELRPAIP RLAREHLGLRDDPRLRLRIGDALESLGECAEADLIFLDLYTDTGPSAAHLAWNFLGAC QERLAEDGWLVINQWSGTDGKPLGAPLLRGRYHHHYWECPVAEGNVVMLVPANLALEL DQEALRTRAAALEPQLGYSLQGYIDSLRPAQ" misc_feature complement(3196900..3197388) /locus_tag="PA2842" /note="Spermidine synthase (polyamine aminopropyltransferase) [Amino acid transport and metabolism]; Region: SpeE; COG0421" /db_xref="CDD:440190" gene 3197642..3198988 /locus_tag="PA2843" /db_xref="GeneID:880259" CDS 3197642..3198988 /locus_tag="PA2843" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldolase" /protein_id="NP_251533.1" /db_xref="GeneID:880259" /translation="MSQSWSPESWRAKPIQQQPEYPDAAHLARVEQTLAGYPPLVFAG EARELRRQFAEVTAGRAFLLQGGDCAESFAEFSAAKIRDTFKVLLQMAVVMTFAAGCP VVKVGRMAGQFAKPRSSGDETQNGVTLPAYRGDIVNGIGFDEKSRVPDPERLLQAYHQ STASLNLLRAFAQGGFADLHQVHRWNLDFIANSALAERYQQLADRIDETLAFMRACGL DSAPQLRETSFFTAHEALLLNYEEALTRRDSLTGEWYDCSAHMLWIGDRTRQIDGAHV EMLRGVGNPIGVKVGPSMDSEELIRLIDILNPDNDPGRLNLIVRMGADKVGDHLPRLI QAIQREGRQVLWSSDPMHGNTIKASSGYKTRDFARVLAEVRQFFEVHQAEGSYAGGIH IEMTGQNVTECIGGSRPITEDGLSDRYHTHCDPRLNADQSLELAFLIAETLKQVRR" misc_feature 3197642..3198976 /locus_tag="PA2843" /note="3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, class II [Amino acid transport and metabolism]; Region: AroG2; COG3200" /db_xref="CDD:442433" gene complement(3199029..3200237) /locus_tag="PA2844" /db_xref="GeneID:880000" CDS complement(3199029..3200237) /locus_tag="PA2844" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251534.1" /db_xref="GeneID:880000" /translation="MSLSLSLAEARRLALAAQGFDGRRTRRSVQRRHLREMLARLGLL QIDSVNALVRSHYLPLFSRLGPYSMTLLDEAAWSVGRHRQLFEYWGHEASLLPLEHYP LMRWRMRQAADGQGIYQQLARFGREQQPLIRQVLQAVREQGALGAGSLSTRQERAGPW WDWSAEKHALEWLFAAGELTVAGRRGFERLYDLPERVFPAELLARPELSEAQAQRELL RMAASALGVATEKDLRDYYRLSPAQSRARLAELVEAGELLPVRVEGWSQPAYCPGEPQ VPRRLGASALLSPFDSLVWERARAERLFDFRYRLEIYTPKEKRVYGYYVLPFLYNGRL VGRVDLRAERARERLVVHALHAEANGMDDAALHELAEQLRSMAAWLGLATVAIEGRGE LAVRLRGVLL" misc_feature complement(3199035..3200141) /locus_tag="PA2844" /note="DNA glycosylase YcaQ, repair of DNA interstrand crosslinks [Replication, recombination and repair]; Region: YcaQ; COG3214" /db_xref="CDD:442447" gene complement(3200320..3200553) /locus_tag="PA2845" /db_xref="GeneID:880001" CDS complement(3200320..3200553) /locus_tag="PA2845" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251535.1" /db_xref="GeneID:880001" /translation="MKGQQDYFGNHCHAVPHPASTAAPSLWRRWRRWLQLARERRELL RMSDEALKDLGLSRADIFQEGERHFWDDPLRRH" misc_feature complement(3200338..3200514) /locus_tag="PA2845" /note="Uncharacterized conserved protein YjiS, DUF1127 family [Function unknown]; Region: YjiS; COG5457" /db_xref="CDD:444208" gene 3200650..3201504 /locus_tag="PA2846" /db_xref="GeneID:879095" CDS 3200650..3201504 /locus_tag="PA2846" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251536.1" /db_xref="GeneID:879095" /translation="MSYQPGIDTELLRTFVAIAEHGGFTRAAEALNRTQSAVSMQMKR LEEDVLQRSLFERDGRQTRLTAEGQVLLGYARRILKLHGEVFNTLRRPHMVGSVRIGT PDDYVMRFLPAILSRFAEAYPLVQVEVHCDTSLNLLARNDLDLSIVTREPGTEIGQLL RQEPFVWMAAEGFCPHDQRPIPLAMFNTTCFCRAWACNALEAAELDYRIAYSSPSLSA LFAVVSAGLAVTVQLRSLLTGNLRILDESEGLPALPSASIMLMRNPHSQSPVTEKLAE YIGEGFRL" misc_feature 3200668..3201453 /locus_tag="PA2846" /note="DNA-binding transcriptional repressor LrhA; Provisional; Region: PRK15092" /db_xref="CDD:237907" gene complement(3201506..3202255) /locus_tag="PA2847" /db_xref="GeneID:879096" CDS complement(3201506..3202255) /locus_tag="PA2847" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251537.1" /db_xref="GeneID:879096" /translation="MLDVFLDFLLGMVLGCLGGLFGIGGGLLAIPALGVIFGLDQQLA QGTALVMVVPNVVLALWRYHQRNRIDPRQAGVLALTGLLCAFLASSVAARIDAARMRE AFVIFLLALAGYMFWRLFRRPPQGGATPRYGLPWMGVLGLGAGSLGGLFGVGGGVLAT PVLTSVFGLAQVVAQGLALALAAPSTAVALGTYAMHGHVDWRMGIPLALGGLLSISWG VRLAHALPERSLRMAFCAFLALCAVLLLVRG" misc_feature complement(3201545..3202171) /locus_tag="PA2847" /note="Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family [Inorganic ion transport and metabolism]; Region: TauE; COG0730" /db_xref="CDD:440494" protein_bind 3202074..3202086 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 3202293..3203312 /locus_tag="PA2848" /db_xref="GeneID:882620" CDS 3202293..3203312 /locus_tag="PA2848" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251538.1" /db_xref="GeneID:882620" /translation="MAGWETHKKAQWLCQLRKGMSMLPDTLSEQFVLYLDVLDGGSFS AAARKHPLTPSAVARRMDALERAVGSTLLVRTTHAVRATPAGLAFADRARRIVTELRL ARAEAVSLSTAPQGLIRIDAPVPFGRRHLAPAVADFLKANPGLDVQLRLIGSFIDLQG EHLGEVDLVLRAGPLPDSRLVATSLAPMVRVVCASPEYLREHGVPASPGELPEHAGID WDNLSPPYAWRFQHDGKLQHLRPKRARLATNNAEAMVDAALAGLGIAHLPTWLCSEYL LRGELQALFCDDGLPAAEPTCIYALRLEREASSRTRLLLAFLRERFGFPPPWDQALQQ RLGER" misc_feature 3202377..3202550 /locus_tag="PA2848" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 3202638..3203246 /locus_tag="PA2848" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(3202668..3202670,3202680..3202682,3202806..3202808, 3202848..3202850,3202854..3202856,3203043..3203045, 3203094..3203096,3203184..3203186) /locus_tag="PA2848" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature order(3202671..3202676,3202686..3202691,3202695..3202700, 3202707..3202709,3202719..3202721,3202725..3202745, 3202935..3202937,3203025..3203039,3203058..3203063, 3203070..3203072) /locus_tag="PA2848" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" protein_bind 3203360..3203370 /experiment="Beta-gal reporter assay [PMID: 20139188]" /experiment="DNAse footprinting [PMID: 20139188]" /experiment="EMSA [PMID: 20139188]" /note="Transcription factor binding site for NP_251539.; Evidence of regulation for: PA2849" /bound_moiety="OhrR" protein_bind 3203372..3203382 /experiment="Beta-gal reporter assay [PMID: 20139188]" /experiment="DNAse footprinting [PMID: 20139188]" /experiment="EMSA [PMID: 20139188]" /note="Transcription factor binding site for NP_251539.; Evidence of regulation for: PA2849" /bound_moiety="OhrR" gene 3203398..3203853 /gene="ohrR" /locus_tag="PA2849" /db_xref="GeneID:882621" CDS 3203398..3203853 /gene="ohrR" /locus_tag="PA2849" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251539.1" /db_xref="GeneID:882621" /translation="MSRLPTTPCEQLKLDNQLCFALYSTSLQMTKVYKPLLQALGLTY PQYIAMLVLWERDGLTVGEISARMLTDPGSLTPLLKRLEGEGLITRTRSSEDERVVLL RLTDKGRALQRQAESIPACILESTGLDLPQLVALKDELLALRGNLQAPD" misc_feature 3203425..3203835 /gene="ohrR" /locus_tag="PA2849" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" protein_bind 3203939..3203949 /experiment="Beta-gal reporter assay [PMID: 20139188]" /experiment="DNAse footprinting [PMID: 20139188]" /experiment="EMSA [PMID: 20139188]" /experiment="Northern blot [PMID: 20139188]" /experiment="qRT-PCR [RNA] [PMID: 20139188]" /experiment="Site directed mutagenesis [PMID: 20139188]" /note="Transcription factor binding site for NP_251539.; Evidence of regulation for: PA2850" /bound_moiety="OhrR" protein_bind 3203959..3203969 /experiment="Beta-gal reporter assay [PMID: 20139188]" /experiment="DNAse footprinting [PMID: 20139188]" /experiment="EMSA [PMID: 20139188]" /experiment="Northern blot [PMID: 20139188]" /experiment="qRT-PCR [RNA] [PMID: 20139188]" /experiment="Site directed mutagenesis [PMID: 20139188]" /note="Transcription factor binding site for NP_251539.; Evidence of regulation for: PA2850" /bound_moiety="OhrR" gene 3203998..3204426 /gene="ohr" /locus_tag="PA2850" /db_xref="GeneID:882604" CDS 3203998..3204426 /gene="ohr" /locus_tag="PA2850" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="organic hydroperoxide resistance protein" /protein_id="NP_251540.1" /db_xref="GeneID:882604" /translation="MQTIKALYTATATATGGRDGRAVSSDGVLDVKLSTPRELGGQGG AATNPEQLFAAGYSACFIGALKFVAGQRKQTLPADASITGKVGIGQIPGGFGLEVELH INLPGLEREAAEALVAAAHQVCPYSNATRGNIDVRLNVSV" misc_feature 3204016..3204417 /gene="ohr" /locus_tag="PA2850" /note="peroxiredoxin, Ohr subfamily; Region: organ_hyd_perox; TIGR03561" /db_xref="CDD:274649" gene complement(3204514..3205080) /gene="efp" /locus_tag="PA2851" /db_xref="GeneID:882605" CDS complement(3204514..3205080) /gene="efp" /locus_tag="PA2851" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="elongation factor P" /protein_id="NP_251541.1" /db_xref="GeneID:882605" /translation="MKTAQEFRAGQVANINGAPWVIQKAEFNKSGRNAAVVKMKLKNL LTGAGTETVFKADDKLEPIILDRKEVTYSYFADPLYVFMDSEFNQYEIEKDDLEGVLT FIEDGMTDICEAVFYNDKVISVELPTTIVRQIAYTEPAVRGDTSGKVMKTARLNNGAE LQVSAFCEIGDSIEIDTRTGEYKSRVKA" misc_feature complement(3204520..3205080) /gene="efp" /locus_tag="PA2851" /note="elongation factor P; Validated; Region: PRK00529" /db_xref="CDD:234788" gene complement(3205123..3206253) /locus_tag="PA2852" /db_xref="GeneID:882634" CDS complement(3205123..3206253) /locus_tag="PA2852" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251542.1" /db_xref="GeneID:882634" /translation="MASWDIFCSVVDNYGDIGVTWRLARQLAAEHGQAVRLWVDEPQA FARICPRADPVAHVQCLDGVEVRAWGRPWAPVAAADVVIEAFACELPEAHRQAMRERK RPSLWLNLEYLSAEEWIGSCHALPSLQACGLSKYFFFPGFREPSGGLLREAGLLERRR RFQASVSAQDEFLASLGVRRKVGERLISLFAYENPALPGWLEQLRDARQPSLLLVPEG RVLADVADWLRVATLAVGDVHVRDALRVQVLPFMAQDDYDRLLWCCDLNAVRGEDSFV RAQWAGRPLLWHIYRQEEETHLAKLEAFLELYCAGLPADLAENLRTFWLAWNAGGGLA GAWEGLERQLPEWRREAQRWADEQGMRPDLAARLVQFYADWL" misc_feature complement(3205135..3206250) /locus_tag="PA2852" /note="Elongation factor P Arg32-rhamnosyltransferase EarP [Translation, ribosomal structure and biogenesis]; Region: EarP; COG4394" /db_xref="CDD:443520" gene 3206408..3206497 /locus_tag="PA2852.1" /db_xref="GeneID:3240253" tRNA 3206408..3206497 /locus_tag="PA2852.1" /product="tRNA-Ser" /db_xref="GeneID:3240253" protein_bind complement(3206739..3206752) /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" protein_bind 3206882..3206895 /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" gene 3206915..3207166 /gene="oprI" /locus_tag="PA2853" /db_xref="GeneID:879851" CDS 3206915..3207166 /gene="oprI" /locus_tag="PA2853" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein OprI" /protein_id="NP_251543.1" /db_xref="GeneID:879851" /translation="MNNVLKFSALALAAVLATGCSSHSKETEARLTATEDAAARAQAR ADEAYRKADEALGAAQKAQQTADEANERALRMLEKASRK" misc_feature <3206975..3207163 /gene="oprI" /locus_tag="PA2853" /note="Lpp/OprI family alanine-zipper lipoprotein; Region: Ala_zip_lipo; NF040598" /db_xref="CDD:468572" gene complement(3207290..3208261) /locus_tag="PA2854" /db_xref="GeneID:879852" CDS complement(3207290..3208261) /locus_tag="PA2854" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251544.1" /db_xref="GeneID:879852" /translation="MLSRVPVVSLSFAALLSAGSASALELQLPPPGEDVVGQVQVIKA KYEDTFADLGEQYNLGYSEMVAANPGVDPWLPGVGTEVIIPTRFVLPPGPREGVVINL AEYRLYYYPKGQNVVHTYPLGIGREGWGSPIANTRITAKTKDPAWYPPASIRAEHAAD GDPLPTVVPPGPDNPLGPYKLTLGVPGYLIHGSNKKFGIGTRTSHGCFRMYNADVTHL FSMISVGTSVRIINEPYKFGVSNGKVYLEAHTPLNDHGDPSVVDKHTAVINTLLKRDD LAKRIQLNWDVVREVVASEDGVPVEIAQESAPAMTATVDSDPTQLTP" misc_feature complement(3207356..3208231) /locus_tag="PA2854" /note="L,D-transpeptidase; Provisional; Region: PRK10260" /db_xref="CDD:182341" gene complement(3208339..3208617) /locus_tag="PA2855" /db_xref="GeneID:878553" CDS complement(3208339..3208617) /locus_tag="PA2855" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251545.1" /db_xref="GeneID:878553" /translation="MPRPAWTLYAYQLIEPDDQLDLFACREVRVHVVARQLELDTPAD RTLCGKLLPAQPRWQPLERARLRDRLLCPDCRKQLEAEKRGERLSWLV" gene complement(3208673..3209278) /gene="tesA" /locus_tag="PA2856" /db_xref="GeneID:878554" CDS complement(3208673..3209278) /gene="tesA" /locus_tag="PA2856" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="esterase TesA" /protein_id="NP_251546.1" /db_xref="GeneID:878554" /translation="MRALLLSGCLALVLLTQQAAAQTLLVVGDSISAALGLDTSQGWV ALLQKRLADEGYDYRVVNASISGDTSAGGLARLPALLAEEKPALVVIELGGNDGLRGM APAQLQQNLASMAQKARAEGAKVLLLGIQLPPNYGPRYIEAFSRVYGAVAAQEKTALV PFFLEGVGGVQGMMQADGIHPALAAQPRLLENVWPTLKPLL" misc_feature complement(3208685..3209212) /gene="tesA" /locus_tag="PA2856" /note="Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity; Region: Lysophospholipase_L1_like; cd01822" /db_xref="CDD:238860" misc_feature complement(order(3208739..3208741,3208748..3208750, 3208991..3208993,3209078..3209080,3209189..3209191)) /gene="tesA" /locus_tag="PA2856" /note="active site" /db_xref="CDD:238860" misc_feature complement(order(3208739..3208741,3208748..3208750, 3209189..3209191)) /gene="tesA" /locus_tag="PA2856" /note="catalytic triad [active]" /db_xref="CDD:238860" misc_feature complement(order(3208991..3208993,3209078..3209080, 3209189..3209191)) /gene="tesA" /locus_tag="PA2856" /note="oxyanion hole [active]" /db_xref="CDD:238860" misc_feature complement(3208970..3208987) /gene="tesA" /locus_tag="PA2856" /note="switch loop [active]" /db_xref="CDD:238860" gene 3209289..3209972 /locus_tag="PA2857" /db_xref="GeneID:880445" CDS 3209289..3209972 /locus_tag="PA2857" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_251547.1" /db_xref="GeneID:880445" /translation="MSASILNAQNLSKVVGSAEGKLTILHDLSLDLARGDSLAIVGSS GSGKSTLLGLLAGLDQPSGGEVRLAGHALGDLDEDQRARVRAAHVGFVFQSFQLLDSL DALENVMLPLELEGRADARQRARELLERVGLGQRLGHYPRQLSGGEQQRVAIARAFAA EPDVLFADEPTGNLDSATGERISDLLFELNRERGTTLVLVTHDERLAHRCRRLIRLES GRLIDRVEP" misc_feature 3209289..3209957 /locus_tag="PA2857" /note="Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport and catabolism]; Region: YbbA; COG4181" /db_xref="CDD:443338" gene 3209981..3212473 /locus_tag="PA2858" /db_xref="GeneID:880446" CDS 3209981..3212473 /locus_tag="PA2858" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251548.1" /db_xref="GeneID:880446" /translation="MPLSRLLSLAGRQLFRESRSGELRVLFFALLIAVASSTAIGYFS ARLNGAMLARAAEFLGADLVLNGTQPASAEQIERGTRLGLRHADSVEFSSVIATDQGI QLSSIKAVGDRYPLRGQLKSAAAPFAAEQAGGRPQAGEVWVESRLLVSLDLKVGDSIE IGRKPLRIARILTYEPDRAGDFYSLTPRAMMSLADLDATGVVQPGSRVRYRDLWEGPP EALQAYRQQVKGSLAANQRLQDARDGNRQVGDALGRAERYLNLASLAAVLLAGVAVAL SAARFAARRYDASALLRCLGLSRSETLLLYALQLLLLGLLASAIGALLGWLAQLGLFR LLATLLPPDVPAGGLFPAFAGIATGLVALAGFALPPLAALGRVPPLRVLRSDLLPVPM RTWMAYACALLALGLIMWRLSLDLKLTLALLGGGLVATLVLGALLLLGLNGLRRALAR ASLPWRLGLGQLLRHPLAAAGQSLAFGLILLAMALIALLRGELLDTWQAQLPPDAPNH FALNILPTEKDAFERRVQKLSPGAEPLFPMVPGRLVAVNGKPVQALDEDVRSERALQR DLGLTWSERLPSGNQLTAGRWWSAPQPGALPGVSVEEKLAANLRIQVGDRLTFSVAGQ NREVQVQSLRKVKWDNFQPNFFMVFQPGTLTDLPVTYLTSFYLPASQERDLIELARAF PTVTLLPVDALLSQLRSILDQVTLAVEYVLVFVLAAGFVVLFAGLQATLDERVRQGAL LRALGAERELLQRTRRVEFALLGAVSGLLAALGCEAVSLLLYRLVFDLPWQAHPWLLA LPLVGAVLVGGAGLLGTRRALNSSPLRVLREG" misc_feature 3209993..3212470 /locus_tag="PA2858" /note="Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport and catabolism]; Region: YbbP; COG3127" /db_xref="CDD:442361" gene 3212525..3213031 /gene="greB" /locus_tag="PA2859" /db_xref="GeneID:879611" CDS 3212525..3213031 /gene="greB" /locus_tag="PA2859" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcription elongation factor GreB" /protein_id="NP_251549.1" /db_xref="GeneID:879611" /translation="MSRYRPPRTAGTPLITPEGAARLRAELHELWHVRRPQVTQAVSE AAALGDRSENAEYIYGKKMLREIDSRVRFLRKRLENLKVVGERPADPNRVYFGAWVTL EDEDGEQARYRIVGPDELDLRNNQISIDSPLARALVGKELDAEVLVRTPAGEKLWFVV EIEYPPAP" misc_feature 3212549..3213019 /gene="greB" /locus_tag="PA2859" /note="transcription elongation factor GreB; Reviewed; Region: greB; PRK01885" /db_xref="CDD:179345" gene complement(3213044..3213484) /locus_tag="PA2860" /db_xref="GeneID:879612" CDS complement(3213044..3213484) /locus_tag="PA2860" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251550.1" /db_xref="GeneID:879612" /translation="MRRFKQQLAGRPAAAEIPLKRWLGVASHRCPAGPKRRRHDVMTC PSTQLRLAPITTGLVRRNPRILLSGPHQPTLVRYLEGWPKRWNGSRTFLIQFAQDGKD LARFPSDAFDFAVVQAPEAEDLDLVVRQLIRVARQGLITRRILR" gene 3213538..3214086 /gene="ligT" /locus_tag="PA2861" /db_xref="GeneID:882606" CDS 3213538..3214086 /gene="ligT" /locus_tag="PA2861" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2'-5' RNA ligase" /protein_id="NP_251551.1" /db_xref="GeneID:882606" /translation="MPDRSLRLFFALPCPPPLAERIGRWRDDRPLPGRQVATANLHLT LAFLGQVPSARLEALLDMAAAIEAAPFDLYLDRLLRWRNGILLLAPSQPPGALLRLRR ALRSGLAELELPVETRSFSAHLTLARDAAPLEDAPLPPTFVWQVDHFSLFCSQNDAAG VRYRTLRRWALCGEDSNERFAP" misc_feature 3213556..3214050 /gene="ligT" /locus_tag="PA2861" /note="RNA 2',3'-cyclic phosphodiesterase (2'-5' RNA ligase) [Translation, ribosomal structure and biogenesis]; Region: ThpR; COG1514" /db_xref="CDD:441123" gene 3214282..3215217 /gene="lipA" /locus_tag="PA2862" /db_xref="GeneID:882662" CDS 3214282..3215217 /gene="lipA" /locus_tag="PA2862" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="lactonizing lipase" /protein_id="NP_251552.1" /db_xref="GeneID:882662" /translation="MKKKSLLPLGLAIGLASLAASPLIQASTYTQTKYPIVLAHGMLG FDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQLLQQVEEIVALSGQPKV NLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGSDTADFLRQIPPGSAGEAVLSGL VNSLGALISFLSSGSTGTQNSLGSLESLNSEGAARFNAKYPQGIPTSACGEGAYKVNG VSYYSWSGSSPLTNFLDPSDAFLGASSLTFKNGTANDGLVGTCSSHLGMVIRDNYRMN HLDEVNQVFGLTSLFETSPVSVYRQHANRLKNASL" misc_feature 3214366..3214689 /gene="lipA" /locus_tag="PA2862" /note="Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and metabolism]; Region: EstA; COG1075" /db_xref="CDD:440693" misc_feature 3214381..3215121 /gene="lipA" /locus_tag="PA2862" /note="alpha/beta hydrolase fold; Region: Abhydrolase_1; pfam00561" /db_xref="CDD:395444" gene 3215423..3216289 /gene="lipH" /locus_tag="PA2863" /db_xref="GeneID:882663" CDS 3215423..3216289 /gene="lipH" /locus_tag="PA2863" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="lipase chaperone" /protein_id="NP_251553.1" /db_xref="GeneID:882663" /translation="MPAPQVMPAKVAPLPTSFRGTSVDGSFSVDASGNLLITRDIRNL FDYFLSAVGEEPLQQSLDRLRAYIAAELQEPARGQALALMQQYIDYKKELVLLERDLP RLADLDALRQREAAVKALRARIFSNEAHVAFFADEETYNQFTLERLAIRQDGKLSAEE KAAAIDRLRASLPEDQQESVLPQLQSELQQQTAALQAAGAGPEAIRQMRQQLVGAEAT TRLEQLDRQRSAWKGRLDDYFAEKSRIEGNTGLSEADRRAAVERLAEERFSEQERLRL GALEQMRQAEQR" misc_feature 3215423..3216286 /gene="lipH" /locus_tag="PA2863" /note="lipase secretion chaperone; Region: PRK01294" /db_xref="CDD:234937" gene complement(3216456..3216890) /locus_tag="PA2864" /db_xref="GeneID:879945" CDS complement(3216456..3216890) /locus_tag="PA2864" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251554.1" /db_xref="GeneID:879945" /translation="MNPLIKTILSTNAGAGLAILRIVTGLTLMSHGSQKLFGMFGGAG LNGMAQWFESIGLTPGYLLATLAGSAEFFGGLALVIGLLVRPASVVVGFTMIVAIFSV HIGNGFFITDNGYEYALTLLMISVALLIDGAGKFSLDGKLSR" misc_feature complement(3216459..3216872) /locus_tag="PA2864" /note="Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown]; Region: DoxX; COG2259" /db_xref="CDD:441860" gene complement(3216989..3218419) /locus_tag="PA2865" /db_xref="GeneID:879946" CDS complement(3216989..3218419) /locus_tag="PA2865" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycosylase" /protein_id="NP_251555.1" /db_xref="GeneID:879946" /translation="MTRLLLLSLCLLVLAPLPAAARITGQPDNWHREQPETRDLASIR RAGVLKVLVNQSRNSSGEVKGEPIGVEYRRLRAFEQYLNSRSPSARNLTLKLIPKPKD QLLAALQRGEGDLVAPGELLPAHDGLQVSPSAPVRADVPLVLVARKGNRRYTRLEQLS GRTIPLPAGSAAEGAIELVNQRLAQRRMAPIRIEKLDASLAVEDVMEMVQAGILGFTV VEQPIAERWAKVLPKLRVDRHLVLDNRADMAWYVRRDASTLRATIDRFLADYRAPADQ DVAFQRVYRRAYKVRNPLGAADRKRLEAVRPLLQRYARQSSMDWLALAAVAYKESHLN PKARGSGGASGLMQITPAAARSVGVGNVHDKDSNVLAASRYLTKIRKQFFSSKHLDER ERLAFTLAAYNMGPERVQNLRTQARRRGLDPNRWFFQVERVAAEEIGMGVVSYVSSVN KYYLAYERERVRLEPGVRAKTATAQK" misc_feature complement(3217046..3218320) /locus_tag="PA2865" /note="Membrane-bound lytic murein transglycosylase MltF [Cell wall/membrane/envelope biogenesis, Signal transduction mechanisms]; Region: MltF; COG4623" /db_xref="CDD:443662" gene 3218666..3219469 /gene="mttC" /locus_tag="PA2866" /db_xref="GeneID:882594" CDS 3218666..3219469 /gene="mttC" /locus_tag="PA2866" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="secretion protein MttC" /protein_id="NP_251556.1" /db_xref="GeneID:882594" /translation="MQLIDIGVNLTHASFAPEREALLARARAAGVVQMVITGTSLADS EQALQLCGELDEGGRLFTTAGVHPHEASHWNADTARGLRALFDDPRVRAVGECGLDFN RDFSPRPAQEKALEEQLALAVELQRPVFLHERDASERLLAILRDFRERLPAAVVHCFT GERRALYGYLDLDLHIGITGWINDERRGTHLHDLVGEIPVGRLMLESDAPYLLPRSLR PKPKNGRNEPAYLVEVLDCVARHRGESAERLAAHTSAAARAFFGLPTID" misc_feature 3218678..3219454 /gene="mttC" /locus_tag="PA2866" /note="Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a...; Region: metallo-dependent_hydrolases; cl00281" /db_xref="CDD:469705" misc_feature order(3218684..3218686,3218690..3218692,3219059..3219061, 3219134..3219136,3219287..3219289) /gene="mttC" /locus_tag="PA2866" /note="active site" /db_xref="CDD:238635" protein_bind complement(3219563..3219575) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2867" /bound_moiety="AmrZ" protein_bind 3219569..3219581 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2867" /bound_moiety="AmrZ" gene 3219608..3221080 /locus_tag="PA2867" /db_xref="GeneID:882595" CDS 3219608..3221080 /locus_tag="PA2867" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_251557.1" /db_xref="GeneID:882595" /translation="MGTWISDIPLKYKFWAVNAVAFFTTLLLVLFAMQQEAAGRNASA QRAAAAEGELVQSWPAGSALPARSNLLPLEQAASLGGTAAQALGKGQGWIELSGARQG DTPLLGAWVGQTGSGQRFAVLAPASDLWQVFADRAGAYAVAVLVLMLALLAASQLLIR FILTHLHTLKDVMLHVEKSGDLSARVPLQGRDEVGQMASAFNAMQAGYQRIVGTVAAA ATKLDEGAQALARSMGQVRQGMLGQQSETDQTATAINEMSTTVFHIAQHAADTRDQSQ EADRLAGAGQQAVSRVSASIAGLSQGVQDTAEMIQKLAEDSQKISGVVNVIHGIAEQT NLLALNAAIEAARAGEMGRGFAVVADEVRNLARRVQDSTDEITQMILALQSGTRDAVE FMQESSLKADGCVSQAGDAGEALAAIANAVAQMRESNTQIAVAAEQQSQVAEEMTRSV VGIRDVTELTVQQTVESAATSQQLVDLAGDLTRAIGQLRL" misc_feature <3220082..3221077 /locus_tag="PA2867" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene 3221206..3221565 /locus_tag="PA2868" /db_xref="GeneID:882630" CDS 3221206..3221565 /locus_tag="PA2868" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251558.1" /db_xref="GeneID:882630" /translation="MGKRHPNLLAWQWRGYAANHRNPTNLVLHLIAVPLFIVAAILLL GGLFGLDLLQVVLGVIGIGAGLAIQAKGHALEEQAPEPFSDRRDAVSRLLVEQFVTFP RFVLSGAWWRAWRERHK" misc_feature 3221251..>3221328 /locus_tag="PA2868" /note="2-hydroxy-palmitic acid dioxygenase Mpo1-like; Region: Mpo1-like; cl01879" /db_xref="CDD:470381" gene 3221652..3222140 /locus_tag="PA2869" /db_xref="GeneID:882631" CDS 3221652..3222140 /locus_tag="PA2869" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251559.1" /db_xref="GeneID:882631" /translation="MPSTRQLIVFLCCLGLPLAQAAEPVPLGGRPIVTLQRSGDAPVR LTLSDLEALPSETLEAQLPGEANARWQGVRLSLLLRHLDLAAPTRLRVLALNDYSAII PYSDLDSYQPILAYRRNGAYMAIRERGPLFIIYPMARYPELRNQVYYNRTVWQVSSIT LE" misc_feature 3221652..3222137 /locus_tag="PA2869" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3915" /db_xref="CDD:443120" gene 3222150..3223727 /locus_tag="PA2870" /db_xref="GeneID:882598" CDS 3222150..3223727 /locus_tag="PA2870" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251560.1" /db_xref="GeneID:882598" /translation="MTVPLLDPTKLRRQRQIMGLLLGLVLLMALIAGAALWLAVRQAQ QLAQPNLHNELWQTYSLRAELDRTLDAARHTESGEGQADDLAIRLEVLASLIAPLRRQ SLFRHLAEPRPEVQATLQRLIELSDRWSDQAPWGDPVAARRLAAEIVQQVPPLLEPTH QIVVASNIALTNQLDVDRKRLHRAFYALFWALLGIGAGGALLVLRLVADFKRAQQLAG HLIELNATLEKRVGERTRQLSEGKALLHFILEASPSDVVLLSACGASIHYVSPRLLKR LGCQAQDDFNLPRLFASASEYSRLQNALEARGQVDGWEAQLCGETPCWAVICARHLEI DGEPATLIWCYDISRRKAMEQELRLLASTDTLTGLHNRHSFLHQAELMLKAAERFRHP CVALMLDIDHFKNINDSHGHLTGDRALQRVAETLRQGLREVDLLGRLGGEEFAALLPE VSLDQALDVAERLRAGVEALRVSNPDGEPLRMTVSIGVALRRDAGDDLESLLVRADSA LYQAKSGGRNRTEYAPA" misc_feature 3222483..>3223706 /locus_tag="PA2870" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" misc_feature 3223236..3223706 /locus_tag="PA2870" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(3223344..3223346,3223473..3223475) /locus_tag="PA2870" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(3223359..3223361,3223368..3223373,3223383..3223385, 3223395..3223397,3223461..3223463,3223467..3223478) /locus_tag="PA2870" /note="active site" /db_xref="CDD:143635" misc_feature order(3223449..3223451,3223533..3223535) /locus_tag="PA2870" /note="I-site [active]" /db_xref="CDD:143635" gene complement(3223736..3224533) /locus_tag="PA2871" /db_xref="GeneID:882599" CDS complement(3223736..3224533) /locus_tag="PA2871" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251561.1" /db_xref="GeneID:882599" /translation="MNFSELIQAVRRDPSSVVVPASWGQGRATFGGLVVALAYEAMLA VVEAGRPLRSIGVSFVGPLAPEQPASFSARLLREGKAVSQVQVEVRQGEQVVTLVQAS FGVARASAVAVEALPAAGMKGPEESQELPYIRNVTPEFTRYIAMRWAVGGLPFSSNKS RQMGGWMRFRDEPEGEPMEVSHLLALLDSWPPALLPHLGTPAMASSLTWTAEFLQPLP QQGSGDWCRYLAEIEEARDGYGHVAARMWSADGQLLAISRQMVTVFG" misc_feature complement(3223739..3224533) /locus_tag="PA2871" /note="Acyl-CoA thioesterase [Lipid transport and metabolism]; Region: TesB; COG1946" /db_xref="CDD:441549" gene complement(3224614..3225384) /locus_tag="PA2872" /db_xref="GeneID:882643" CDS complement(3224614..3225384) /locus_tag="PA2872" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251562.1" /db_xref="GeneID:882643" /translation="MTGFIDELLAEVIGQQVALMSAVARLEARTDGEALHDLRIALRR LRSLLRPIRGVPGVEELEHAAAEVGRLSGPIRDLEVLLPALAAEGLRDALAVRRPVLE SGYVAVLASQPLHRLQLCLDVWPALLRTAQRHAVLDGLHGRVRKRLRRQWKTLRAELA DTTYEHWHPLRLRIKRVRYGLEAYPHDCSIPGSLLAPLKAAQSALGDWHDLEQWLLRC QREPDLAPVREVWTARFELARERAGRALSTLQQALAGH" misc_feature complement(3224623..3225372) /locus_tag="PA2872" /note="CHAD domain, binds inorganic polyphosphates [Function unknown]; Region: CHAD; COG5607" /db_xref="CDD:444338" gene complement(3225381..3227387) /locus_tag="PA2873" /db_xref="GeneID:882644" CDS complement(3225381..3227387) /locus_tag="PA2873" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="protein-glutamine gamma-glutamyltransferase" /protein_id="NP_251563.1" /db_xref="GeneID:882644" /translation="MNAIPRVALVWLLVAQVLVILPHLAYMPLWIAAMWLGCAAWRVQ VFRMRAGYPRAWVKLALALLAGAGVWLSRGSLVGLDAGAVLLIAAFILKLVEMKTRRD ALVLVFLGFFAVVVGYLFDDGFLAALYSLLPVTALLAALIGLQQSAFASRPWPTLRLA GGLLLQALPLMLLLFLFFPRLGPLWSLPMPGNKGVTGLSESMAPGDIAELGRSAELAF RVRFEGALPPREQLYWRALTMERFDGRRWAQAPQWSGEDALHWQKRGPELRYDVIMQP SSQPWLFALDVAQTDQTDTRLMSDFHLQRRQPVEQRLFYRVSSWPQALRESSIDPRTR WRNLQLPMHGNPRARALADELRQAHAQPQALVAALLQRFNHEPFAYTLKPPATGADGV DDFLFDTRSGFCAHYAGAMAFVLRAAGIPARVVAGYQGGELNPAGNYLLVHQFDAHAW VEYWQPEQGWLSVDPTYQVAPERIEQGLEQALAGDSEYLADAPLSPLRYRGLPWLNDM RLAWDSLNYGWQRWVLAYQGEQQGAFLQRWFGGLDPTRLGLLLGAAAILSVGLLALFL LKPWQGRGDLRSRQLRRFERLLEMHGLRRSPGEGLRSYGERAARVLPAQAPAIAAFVG AFEAQRYGHGGADDPGLRLRALRRALPWRLVRTPTRDGRGEEQA" misc_feature complement(3226410..3227357) /locus_tag="PA2873" /note="TgpA N-terminal domain; Region: TgpA_N; pfam11992" /db_xref="CDD:463423" misc_feature complement(3225990..3226514) /locus_tag="PA2873" /note="Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]; Region: YebA; COG1305" /db_xref="CDD:440916" misc_feature complement(3225474..3225644) /locus_tag="PA2873" /note="Domain of unknown function (DUF4129); Region: DUF4129; pfam13559" /db_xref="CDD:433308" gene complement(3227384..3228337) /locus_tag="PA2874" /db_xref="GeneID:882614" CDS complement(3227384..3228337) /locus_tag="PA2874" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251564.1" /db_xref="GeneID:882614" /translation="MRLRNWPRWQRWLNRRIPPASSVELNQRRVFILPTRQGGAFGLA LLVMLLAAINYQNSLAYGLTFLLLSLGVVTILHTYRNLAGLRLTALGADPVFAGERAG FRVRLESPRRARQAIAVGWPERPLEYADLAGDAAAEVLLFHPTERRGWLRPGRLRVES RFPLGLLVAWSWVDLRQQALVYPRPQAGEPLLAPGAEDAEDQGRALASAGVDDYQGLR AYQPGDSRRRLHWKAFSRGQGLLVKDFAALGGEDLWLEFERLGGDLESRLGRLCHAVL ELSARQQPYGLALPGTRLQPASGEAQREACLRALALFGAAR" misc_feature complement(<3227387..3228022) /locus_tag="PA2874" /note="Uncharacterized conserved protein, DUF58 family, contains vWF domain [Function unknown]; Region: YeaD2; COG1721" /db_xref="CDD:441327" gene complement(3228337..3229254) /locus_tag="PA2875" /db_xref="GeneID:882615" CDS complement(3228337..3229254) /locus_tag="PA2875" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251565.1" /db_xref="GeneID:882615" /translation="MLNTLEACLKAVDEILLGKDRQVRLALACLLARGHLLIEDLPGM GKTTLSHALARVLGLSFQRIQFTSDLLPGDILGTSVFDKDSGQFVFHPGPIFAELVLA DEINRATPKSQSALLEAMEEGQVTIEGATRPLPEPFFVIATQNPASQGGTFSLPESQL DRFLMRLSLGYPGRAAERSLLLGEARRDLLPRLEPLLDHAALAAFQAEVPKIRASDAL VDYVLRLVEATRTQPAFALGLSPRGSLALLAAARAWALLAGRDYVIPEDVQAVLPAVA GHRLRDQADPTGHGGGALVQWLLREVPAL" misc_feature complement(3228415..3229230) /locus_tag="PA2875" /note="MoxR-like ATPase [General function prediction only]; Region: MoxR; COG0714" /db_xref="CDD:440478" gene complement(3229484..3230182) /gene="pyrF" /locus_tag="PA2876" /db_xref="GeneID:882585" CDS complement(3229484..3230182) /gene="pyrF" /locus_tag="PA2876" /EC_number="4.1.1.23" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="orotidine 5'-phosphate decarboxylase" /protein_id="NP_251566.1" /db_xref="GeneID:882585" /translation="MSACQSPIIVALDFPTREAALALADQLDPKLCRVKVGKELFTSC AAGIVETLRGKGFEVFLDLKFHDIPNTTAMAVKAAAEMGVWMVNVHCSGGLRMMAACR ETLEAFSGPRPLLIGVTVLTSMEREDLAGIGLDIEPQEQVLRLAALAQKAGMDGLVCS AQEAPALKAAHPGLQLVTPGIRPAGSAQDDQRRILTPRQALDAGSDYLVIGRPISQAA DPAKALAAIVAELG" misc_feature complement(3229490..3230173) /gene="pyrF" /locus_tag="PA2876" /note="orotidine-5'-phosphate decarboxylase; Region: PRK00230" /db_xref="CDD:234695" misc_feature complement(order(3229547..3229552,3229646..3229648, 3229817..3229822,3229991..3229993,3229997..3229999, 3230072..3230074,3230078..3230080,3230144..3230146, 3230150..3230152)) /gene="pyrF" /locus_tag="PA2876" /note="active site" /db_xref="CDD:240076" misc_feature complement(order(3229547..3229549,3229760..3229762, 3229820..3229822,3229874..3229876,3229907..3229915, 3229958..3229963,3229970..3229975,3229982..3229987, 3229991..3229996,3230063..3230068,3230072..3230074)) /gene="pyrF" /locus_tag="PA2876" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:240076" gene complement(3230279..3231172) /locus_tag="PA2877" /db_xref="GeneID:882586" CDS complement(3230279..3231172) /locus_tag="PA2877" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251567.1" /db_xref="GeneID:882586" /translation="MDRLDSMRVFLRVAETGSFTKAADLLDMPRATVSAAVQQLEAQL GSRLLHRTTRQVQLTHDGSVVLERCRHLLEDMEELESLFHDGSRASGRLKVDVPSRVA RLLIAPALPEFFRQHPDIELELGSSDRSVDLVQEGVDCVLRVGQLGNSSLVARRLGEM QLINCASPAYLEEHGEPRTPADLDRHWAVNYASPSSGRVLPWEYREDGRTLTRALRSR VTVNNAESYIACCLSGLGLIQIPAYDVREHLQRGELREVLPQWRAEAMPAYALYPHRR HLSRRVRAFVDWLEQLLRARL" misc_feature complement(3230987..3231163) /locus_tag="PA2877" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(3230297..3230902) /locus_tag="PA2877" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold; Region: PBP2_CrgA_like_3; cd08472" /db_xref="CDD:176161" misc_feature complement(order(3230369..3230371,3230450..3230452, 3230501..3230503,3230693..3230695,3230699..3230701, 3230741..3230743,3230858..3230860,3230870..3230872)) /locus_tag="PA2877" /note="putative effector binding pocket [active]" /db_xref="CDD:176161" misc_feature complement(order(3230474..3230476,3230483..3230488, 3230507..3230521,3230612..3230614,3230795..3230815, 3230819..3230821,3230831..3230833,3230840..3230845, 3230849..3230854,3230864..3230869)) /locus_tag="PA2877" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176161" gene 3231218..3231859 /locus_tag="PA2878" /db_xref="GeneID:882674" CDS 3231218..3231859 /locus_tag="PA2878" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251568.1" /db_xref="GeneID:882674" /translation="MPPTFIQRTRTNSLESLLYFLDPQMPHAALLLPPSASPLPEVVG FWRDAGPTLWFARNADFDRRFRERFTHLYELACANALRPAADEAEDHLGLLLLLDQYP RNAFRGTPRMYASDAQARRWAERALGQGLDRQVGDALRLFFYLPFAHAENLADQDRSV ALNHGLGQPFLAHAREHREIIRRFGRFPHRNPILGRPSSAEELAFLAAGGFAG" misc_feature 3231338..3231847 /locus_tag="PA2878" /note="Uncharacterized conserved protein, DUF924 family [Function unknown]; Region: COG3803" /db_xref="CDD:443016" gene complement(3231882..3232772) /locus_tag="PA2879" /db_xref="GeneID:882675" CDS complement(3231882..3232772) /locus_tag="PA2879" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251569.1" /db_xref="GeneID:882675" /translation="MHLSPESLEAFVQAVSLGSFSAAARKLGKSQSTVSEAIARLEID LGLELFDRSGRQPQLTEAGRTLLGRVEEVLGASDRLRRVAALLAGGSEPRVTLALSDT YHSARYEARLAELDERYPELEFECLIAEDQDVIAQVSRGRATLGLLAAQPHYPPELGV AAVAERAEFGLFAAVDHPLAGLERVSERDLSEWRLLRLNTYSETGAAINDGLPSSGGR CWSAPNYLLLLEMATHGFGWAELPRWLVSGYANGRLKELPVSGWPRSQAVDVVWSRQR PLGPAANWLLDRLLDRDLPI" misc_feature complement(3231921..3232751) /locus_tag="PA2879" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 3232819..3233334 /locus_tag="PA2880" /db_xref="GeneID:882666" CDS 3232819..3233334 /locus_tag="PA2880" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251570.1" /db_xref="GeneID:882666" /translation="MTIQPDFNDEPGAFAMTHTHTALDKTLKERIFHALAFEGLAVLL TAPVLSLVMNKPLAHMGALTLMFSTVAMLWNMLFNSLFDRAQRRMGFQRTLQVRVLHA MLFELGLIVVLVPLAAWWLSIGLVEAFLLDMGLILFFLPYTMAFNWSYDVLRARLVES RQAKAAGCDAG" misc_feature 3232894..3233283 /locus_tag="PA2880" /note="multidrug/biocide efflux PACE transporter; Region: PACE_efflu_PCE; NF033665" /db_xref="CDD:411268" gene complement(3233343..3234254) /locus_tag="PA2881" /db_xref="GeneID:882667" CDS complement(3233343..3234254) /locus_tag="PA2881" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_251571.1" /db_xref="GeneID:882667" /translation="MSPSPVRILFVDDEERILRSLAMQFRRHYEVLTESDPRRALERL KTERIQVLVSDQRMPQMSGAELLAQARERYPETLRILLTGYSDLDAAVDALNDGGIFR YLTKPWNPQEMAFTLRQAAEIASRQGLPAPPAATLAAPLSVLLLDDDPETLDCVGAFC HAGGHRLLRARNLAEALVWLNTEPVEVLVSDLKLAGEHTAPLLKSLAQAHPRLLSLVV TPFRDTQALLELINQAQIFRYLPKPIRRGLFEKGLKAAAEQALLWRGRSLPEVDRLAE VPRDEREKERVGSLLGMLGRLRERLTA" misc_feature complement(3233889..3234236) /locus_tag="PA2881" /note="phosphoacceptor receiver (REC) domain of hydrogen uptake protein regulator (HupR) and similar domains; Region: REC_HupR-like; cd17569" /db_xref="CDD:381113" misc_feature complement(order(3233946..3233954,3233958..3233960, 3233967..3233972,3233979..3233981,3233991..3233993)) /locus_tag="PA2881" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:381113" misc_feature complement(<3233463..3233831) /locus_tag="PA2881" /note="DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]; Region: AtoC; COG2204" /db_xref="CDD:441806" gene complement(3234256..3235371) /locus_tag="PA2882" /db_xref="GeneID:882559" CDS complement(3234256..3235371) /locus_tag="PA2882" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_251572.1" /db_xref="GeneID:882559" /translation="MQRFGRDLWGRHPVRDVMNRAPLSVSLGASLEEAAQQVTGRLQY PITEDFALVDEEGRYRGLGTVLDLLKAMEARIAQRNRVLRKALVDLKESQAQLVQSEK MASLGQMVAGVAHELNTPLGYVGNNLALLEELSDPLLRLADAQAALVDCLGDPQCDEA RLAQALQAADAVRREAAVEQLREDLRQLFVDTRYGLGQIGELVSGLKDFARLDRAFSE EVDLNDCVRNAVLIARTAIKDKAEISSQLGELPLIACAPSQINQVLLNLLTNAAQAME RFGRILLKSWADERQVFLSVQDNGKGMPAEVLGRIFDPFFTTKPVGQGTGLGLSISYK IIQQHGGTIRVASEPGRGTRFLISLPREQARELKRSA" misc_feature complement(3234289..3235371) /locus_tag="PA2882" /note="Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]; Region: COG4191" /db_xref="CDD:443345" gene 3235794..3235961 /locus_tag="PA2883" /db_xref="GeneID:882560" CDS 3235794..3235961 /locus_tag="PA2883" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251573.1" /db_xref="GeneID:882560" /translation="MPWYAWLIIVLALGSIVGGLLLLRDSAKKLPLSEEQLKRIHERN AELDAQEAKDR" misc_feature 3235800..3235952 /locus_tag="PA2883" /note="Protein of unknown function (DUF2897); Region: DUF2897; pfam11446" /db_xref="CDD:431884" gene 3236194..3236958 /locus_tag="PA2884" /db_xref="GeneID:882712" CDS 3236194..3236958 /locus_tag="PA2884" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251574.1" /db_xref="GeneID:882712" /translation="MLGRLIPLLPILFLLGGFFTGHIALLTAVIVLLYIIWVTYAERW LPTLLWWPVSLAASALIAIHYLPGFIPLRLFPWDLASASPPIQMIWLPWDKALVALTL LAWWLRRPKQPLVSLDITALAFCLTFFVVPLLSIMTNAASWQPKWPDAFWWWLVLNVG VVSLAEEAFFRGLLQSQLIRWFGAWPGIIVATLAYAALHLLVNPVYALLAGIAGLGYG MVLHFSGRLSLAVLLHASINTLHFLLLSYPFRLISE" misc_feature 3236641..3236928 /locus_tag="PA2884" /note="Membrane protease YdiL, CAAX protease family [Posttranslational modification, protein turnover, chaperones]; Region: YdiL; COG1266" /db_xref="CDD:440877" protein_bind complement(3236555..3236567) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(3236959..3237555) /gene="atuR" /locus_tag="PA2885" /db_xref="GeneID:882713" CDS complement(3236959..3237555) /gene="atuR" /locus_tag="PA2885" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="atu genes repressor" /protein_id="NP_251575.1" /db_xref="GeneID:882713" /translation="MLELVATGQLTDPESARGKLLQTAAHLFRSKGYERTTVRDLASA VGIQSGSIFHHFKSKDEILRSVMEETILYNTALMRAALADAEDLRERVLGLIRCELQS IMGGTGEAMAVLVYEWRSLSAEGQAYILGLRDIYEQMWLDVLGEARLAGYCQGDPFIL RRFLTGALSWTTTWFRPEGPMSLDQLAEEALALVIKNA" misc_feature complement(3237358..3237498) /gene="atuR" /locus_tag="PA2885" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:425684" misc_feature complement(3236968..3237291) /gene="atuR" /locus_tag="PA2885" /note="Tetracyclin repressor-like, C-terminal domain; Region: TetR_C_24; pfam17932" /db_xref="CDD:465574" gene 3237836..3239638 /gene="atuA" /locus_tag="PA2886" /db_xref="GeneID:882608" CDS 3237836..3239638 /gene="atuA" /locus_tag="PA2886" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251576.1" /db_xref="GeneID:882608" /translation="MQKTVRIGCASAFWGDTCTAAAQLVRGAPLDYLVFDYLAEITMS IMAGARLKQPDAGYATDFVEVLAPLLGEIAEKKIRVISNAGGINPQACAAALAAACEK AGVQLKIAVLHGDNLQARQAELAKSGIREMFSDAPFPPMCVSLNAYLGAPGIVEALRL GADIVITGRVVDSAVVSAALVHEFGWAWDDYDRLAQAALAGHIVECGAQCTGGNFTDW EQVPDYEHIGFPIVEVEADGRFVVTKAPGTGGLVSELSVGEQMLYEIGDPRAYLLPDV VCDFTEVRLRQAGPDRVAVEGARGLPPTDRYKVSATYPDGFRCTASCLIAGIDALKKA ERVSQAIIARTEEIFAEHGWEPYREVNVELLGSEATYGPHGRRQDSREVVVKLAVRHP RKEALVLFSREIAQAATGMAPGLTGIVGGRPTVYPVIRLFSFLIDKAQCALSVEIDGQ RHPLELPVLEAFDPARLAEARQPPRPEQPASASVPLLKLAVARSGDKGNHSNIGVMAR RPEYLPWIAEALEEGAVVDWMQHVLDPQTGRVGRWYLPGSHSLNFLLENALGGGGVAS LRIDPQGKAFAQQLLEFPVAVPQALADALETQGR" misc_feature 3237854..3238930 /gene="atuA" /locus_tag="PA2886" /note="Acyclic terpene utilization family protein AtuA; Region: AtuA; pfam07287" /db_xref="CDD:462134" gene 3239711..3240589 /gene="atuB" /locus_tag="PA2887" /db_xref="GeneID:882609" CDS 3239711..3240589 /gene="atuB" /locus_tag="PA2887" /note="'class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene'" /codon_start=1 /transl_table=11 /product="citronellol catabolism dehydrogenase" /protein_id="NP_251577.1" /db_xref="GeneID:882609" /translation="MSYDSIFRPGLFDGQTIIVTGGGSGIGRCTAHELAALGAHVVLV GRKAEKLEKTAGEIVEDGGSVSWHACDIREEEAVKTLVANILAERGTIHHLVNNAGGQ YPSPLASISQKGFETVLRTNLVGGFLVAREVFNQSMSKTGGSIVNMLADMWGGMPGMG HSGAARSGMENFTRTAAVEWGHAGVRVNAVAPGWIASSGMDTYEGAFKAVIPTLREHV PLKRIGSESEVAAAIVFLLSPGAAFVSGNTIRIDGAASQGSRAFPLFKGKPGQSRAYN GFHRAYLPDVLKDQED" misc_feature 3239744..3240478 /gene="atuB" /locus_tag="PA2887" /note="Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR; Region: TER_DECR_SDR_a; cd05369" /db_xref="CDD:187627" misc_feature order(3239771..3239773,3239780..3239788,3239843..3239851, 3239918..3239929,3240002..3240010,3240071..3240073, 3240152..3240160,3240206..3240208,3240284..3240295, 3240299..3240301) /gene="atuB" /locus_tag="PA2887" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187627" misc_feature order(3239846..3239848,3239927..3239929,3240008..3240019, 3240041..3240043,3240047..3240052,3240059..3240061, 3240158..3240160,3240164..3240166,3240194..3240196, 3240290..3240292) /gene="atuB" /locus_tag="PA2887" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187627" misc_feature order(3239933..3239935,3240026..3240034,3240038..3240046, 3240053..3240058,3240065..3240067,3240077..3240082, 3240089..3240094,3240101..3240103,3240113..3240115, 3240122..3240124,3240134..3240136,3240164..3240166, 3240173..3240184,3240188..3240190,3240197..3240202, 3240209..3240214,3240221..3240226,3240230..3240253, 3240257..3240259,3240290..3240292,3240362..3240370, 3240374..3240382,3240392..3240394,3240401..3240406, 3240413..3240415,3240428..3240430,3240434..3240451, 3240455..3240478) /gene="atuB" /locus_tag="PA2887" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:187627" misc_feature order(3240014..3240016,3240164..3240166,3240194..3240196, 3240206..3240208) /gene="atuB" /locus_tag="PA2887" /note="active site" /db_xref="CDD:187627" misc_feature order(3240026..3240034,3240038..3240040,3240053..3240058, 3240065..3240067,3240080..3240082,3240089..3240094, 3240173..3240184,3240188..3240190,3240197..3240202, 3240209..3240214,3240221..3240226,3240233..3240235, 3240242..3240247) /gene="atuB" /locus_tag="PA2887" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187627" gene 3240591..3242207 /gene="atuC" /locus_tag="PA2888" /db_xref="GeneID:882701" CDS 3240591..3242207 /gene="atuC" /locus_tag="PA2888" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="geranyl-CoA carboxylase subunit beta" /protein_id="NP_251578.1" /db_xref="GeneID:882701" /translation="MPAIQSELDVNGEDFARNREAMLAAVAGFRELEQKVLDKAAEAR PKFEKRGQLLPRERLALLLDPGAPFLELSSLAGYKLHDDKDGTQAGGGIIAGIGYIAG VRCLVSASNSAIKGGTISPTGLKKTLRLQQIAMENKLPVVTLTESGGANLNYAAEIFV EGARGFANQARISAMGIPQVTVVHGSSTAGGAYQPGLSDYVVVVRGKAKMFLAGPPLL KAATGEIASDEELGGAELHAQVAGTAEYLAENDADGVRLAREIVGMLPWNAQLPARPA RSWREPLYPVEELLGVVPADPKKPYDVREIVARIADGSEFLDFKNEFDGQTVCGHLRI EGHACGLIGNNGPITPQGAAKAAQFIQLCEQSNTPLLFLHNTTGFMVGTESERQGVIK HGSKMIQAVANARVPKLTLVVGGSYGAGNYAMCGRGLDPRFIFAWPNSRTAVMGGAQA GKVLRIVTEEKHAKEGKEADPKMLEMLETVTAQKLDSQSTALYGTASLWDDGLVDPRD SRRLLGYLLDICAEAEARPLKGNSFGVARF" misc_feature 3240651..3242195 /gene="atuC" /locus_tag="PA2888" /note="Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism]; Region: MmdA; COG4799" /db_xref="CDD:443827" gene 3242324..3243484 /gene="atuD" /locus_tag="PA2889" /db_xref="GeneID:882702" CDS 3242324..3243484 /gene="atuD" /locus_tag="PA2889" /note="'class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene'" /codon_start=1 /transl_table=11 /product="citronellyl-CoA dehydrogenase" /protein_id="NP_251579.1" /db_xref="GeneID:882702" /translation="MIFTQEHEELRRTVRSFVEREINPNVDQWEKDGRFPIHEIFRKA GELGLLGISKPEKFGGMGLDYSYSIVAAEEFGSITCGGIPMAIGVQTDMCTPALARFG SDELREEFLRPAIAGEMVGCIGVSEVGAGSDVAGLKTTARKDGDDYVINGSKMWITNS PSADFMCLLANTSDDKPHVNKSLIVVPMKTPGITLSPHLDKLGMRSSETAQVFFDNVR VPQRNRIGAEGAGFMMQMLQFQEERLFGAANMIKGLEHCIDVTIEYCKERRTFGQPLI DNQVIHFRMAEMMTEVEALRALVYQATELYVKGRDVTRLASMAKLKAGRLGREVSDAC LQYWGGMGFMWDNPVSRAYRDTRLVSIGGGADEIMLGIICKLMGILPGKKKG" misc_feature 3242330..3243469 /gene="atuD" /locus_tag="PA2889" /note="Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]; Region: CaiA; COG1960" /db_xref="CDD:441563" gene 3243505..3244299 /gene="atuE" /locus_tag="PA2890" /db_xref="GeneID:882708" CDS 3243505..3244299 /gene="atuE" /locus_tag="PA2890" /note="'class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene'" /codon_start=1 /transl_table=11 /product="isohexenylglutaconyl-CoA hydratase" /protein_id="NP_251580.1" /db_xref="GeneID:882708" /translation="MSLPHCETLLLEPIEGVLRITLNRPQSRNAMSLAMVGELRAVLA AVRDDRSVRALVLRGADGHFCAGGDIKDMAGARAAGAEAYRTLNRAFGSLLEEAQAAP QLLVALVEGAVLGGGFGLACVSDVAIAAADAQFGLPETSLGILPAQIAPFVVRRIGLT QARRLALTAARFDGREALRLGLVHFCEADADALEQRLEETLEQLRRCAPNANAATKAL LLASESGELGALLDDAARQFAEAVGGAEGSEGTLAFVQKRKPVWAQ" misc_feature 3243529..3244281 /gene="atuE" /locus_tag="PA2890" /note="Enoyl-CoA hydratase/carnithine racemase [Lipid transport and metabolism]; Region: CaiD; COG1024" /db_xref="CDD:440647" gene 3244345..3246330 /gene="atuF" /locus_tag="PA2891" /db_xref="GeneID:882709" CDS 3244345..3246330 /gene="atuF" /locus_tag="PA2891" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="geranyl-CoA carboxylase subunit alpha" /protein_id="NP_251581.1" /db_xref="GeneID:882709" /translation="MPSFNKILVANRGEIACRVLRTAHELGYRSVAVYSEADADTRHV QLADEAVCIGPAAVAQSYLNLEAILDAARRSGAEAIHPGYGFLSENAEFARACEAAGI VFIGPDAEAIHLMGSKRLSKIAMLAAGVPCIPGYEGAEQDDATLRREAERIGYPLMIK ASAGGGGRGMRLVEEPGQLLEQLRTARSEALGAFGSAELILERAVLRPRHVEIQVFGD RHGNLLYLGERDCSVQRRHQKVIEEAPCPVLDADLRRAMGEAAVKAAASVNYVGAGTV EFLLGEDGRFYFLEMNTRLQVEHPVTELVTGQDLVAWQIRIAEGHPLPLRQEQVELRG HAIEVRLYAEDAGRGFLPQTGTVLRWDPELLPGVRIDHGLVEGQAVTPFYDPMLAKLI AYGATRDEARRKLIRALERCVLLGVDGNQRFLANLLAHPDFAAGEATTAFIGERFAED PSLQPRQPGAEELALAAALLYQAGAEASAHQPGLAGWRSAAGAPWKIVLKHAEQRLEI GLEVLESGRRPRLLARLERREIAVRLLDCDGRWASAELDGIRRRHAYHLDGGRLWLYG HGGNLELLDVTHAGASAQVGASSGTLKAPMDGAIVEVLVGEGERVGKGQLLLVLEAMK MEHPLKAGVDGVVRRVQVGRGEQVRNRQVLVEVEADA" misc_feature 3244354..3245718 /gene="atuF" /locus_tag="PA2891" /note="Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism]; Region: PccA; COG4770" /db_xref="CDD:443802" misc_feature 3246115..3246315 /gene="atuF" /locus_tag="PA2891" /note="The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase; Region: biotinyl_domain; cd06850" /db_xref="CDD:133459" misc_feature order(3246184..3246186,3246211..3246219,3246238..3246240) /gene="atuF" /locus_tag="PA2891" /note="carboxyltransferase (CT) interaction site [active]" /db_xref="CDD:133459" misc_feature 3246214..3246216 /gene="atuF" /locus_tag="PA2891" /note="biotinylation site [posttranslational modification]; other site" /db_xref="CDD:133459" gene 3246382..3247206 /gene="atuG" /locus_tag="PA2892" /db_xref="GeneID:882587" CDS 3246382..3247206 /gene="atuG" /locus_tag="PA2892" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_251582.1" /db_xref="GeneID:882587" /translation="MSLHGKTLFITGASRGIGREIALRAARDGANLVIAAKSAEPHPK LEGTIFSVAAEVEAAGGQALPLQLDVRDEQAVAAAMARAAERFGGIDALVNNAGAIRL VGVEKLEPKRFDLMYQINTRAVLVCSQAALPYLRRSANGHILSLSPPINLAGRWFAQH GPYTVTKYGMSMLTLGMHEEFGKYAISVNALWPKTMIATAAIEFELGSRDAFRRARTP AIMADAAHAILTSEGRSLSGRLLVDEELLRERGQSDFEQYRYDPEGGALVPDLFLD" misc_feature 3246382..3247200 /gene="atuG" /locus_tag="PA2892" /note="SDR family oxidoreductase; Region: PRK08278" /db_xref="CDD:181349" misc_feature order(3246415..3246417,3246421..3246426,3246430..3246432, 3246487..3246495,3246667..3246675,3246817..3246825, 3246868..3246870,3246880..3246882,3246958..3246969) /gene="atuG" /locus_tag="PA2892" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187663" misc_feature order(3246739..3246741,3246823..3246825,3246868..3246870, 3246880..3246882) /gene="atuG" /locus_tag="PA2892" /note="active site" /db_xref="CDD:187663" gene 3247369..3249195 /gene="atuH" /locus_tag="PA2893" /db_xref="GeneID:882588" CDS 3247369..3249195 /gene="atuH" /locus_tag="PA2893" /note="class 4: Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences." /codon_start=1 /transl_table=11 /product="long-chain-acyl-CoA synthetase" /protein_id="NP_251583.1" /db_xref="GeneID:882588" /translation="MTHADLITFNRFVARLPATFGRVPRMLRGLYYTAIRNREKSLSL GWALERAARLYPDNPAVLDGQRRISYALFNGWANRLARAFKAEGVGHGSVVAVMLENR VELLAILAALAKLGAIGALVNTTQRGKVLVHSLNLVKPGHFVVGEELREVFEEVRHEV LGNAGHCYWVDDGDTLGDPGSPPMGWRNLMRLAQGQTSENLEDTGRVRLKDSCFYIYT SGTTGLPKASIMSHGKWIKAYGGFGHSGLGLGRDDVLYLTLPCYHNNAVTVCWSAALA GGAAMALRRKFSASGFWKDVQHYRATCFGYIGELCRYLLNQPPCAEERGNSLTCMIGN GLRPSIWAEFKQRFEIQRITEFYASSEGNIGFTNVFNFDNTVGFSPATYAIVRYDLEN DRPVRDAKGFMEKVGKGEVGLLISEISAKWPFDGYTDPAKSEAVILRDVFKKGDAWFN TGDLMRDIGFKHTQFVDRLGDTFRWKGENVSTTEVENALGAFDGVEDAVVYGVEIPGT NGRCGMAALRLADGVELDRDALAAHLDRELPAYATPVFLRLLREVETTGTFKYKKTDL KRDAYDPARVSDKLFVRLPGSAGYQPLDAELYQALQEQRYRF" misc_feature 3247387..3249192 /gene="atuH" /locus_tag="PA2893" /note="long-chain-acyl-CoA synthetase; Validated; Region: PRK08279" /db_xref="CDD:236217" misc_feature order(3248011..3248013,3248020..3248037,3248041..3248046) /gene="atuH" /locus_tag="PA2893" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341228" misc_feature order(3248020..3248022,3248368..3248373,3248431..3248448, 3248725..3248727,3248761..3248763,3248770..3248772, 3248803..3248805,3249046..3249048) /gene="atuH" /locus_tag="PA2893" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341228" misc_feature order(3248020..3248022,3248143..3248148,3248314..3248316, 3248320..3248325,3248332..3248334,3248368..3248373, 3248431..3248448,3248725..3248727,3248761..3248763, 3248770..3248772,3248794..3248805,3248989..3248991) /gene="atuH" /locus_tag="PA2893" /note="active site" /db_xref="CDD:341228" misc_feature order(3248143..3248145,3248320..3248325,3248332..3248334, 3248368..3248370,3248794..3248802,3248962..3248964, 3248989..3248991) /gene="atuH" /locus_tag="PA2893" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:341228" gene complement(3249209..3249631) /locus_tag="PA2894" /db_xref="GeneID:882600" CDS complement(3249209..3249631) /locus_tag="PA2894" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251584.1" /db_xref="GeneID:882600" /translation="MPAAPKTASKKVAPAAEQVAEPKPPAKPKPAAAPPKPASRPVAK DKPAPAKRASTARLDPEVRKPLPSAKLDLRLPKELVQKMAPPGTEETHKPKPLLPPMF EEKDDSDFRLNGQLLYRDRELGVSRPLEGAELQFEFRQ" protein_bind complement(3249810..3249822) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2894" /bound_moiety="AmrZ" protein_bind complement(3249832..3249844) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2894" /bound_moiety="AmrZ" protein_bind 3249838..3249850 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2894" /bound_moiety="AmrZ" gene complement(3249977..3250741) /locus_tag="PA2895" /db_xref="GeneID:882601" CDS complement(3249977..3250741) /locus_tag="PA2895" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251585.1" /db_xref="GeneID:882601" /translation="MNPQKHSASVAEEQMLAHFRAHAPQQPAPALDQAILAAARRQAA HVEPARSWWRRWLEASRRPRWQAAFASLLGVALVLGLVSHNVLDDAERQARPEVAFSD VPLRDGVAGAAAAKRAMRAPAAPAPLSGEMSEPPALLASYASSGEAPQLMAEAAPPAP AALADRPPAQAAQQAKVQAALAGDFVAQARGKAVAVKPEVLDEALGAVLALREQGKTE QAATQLAELQKRFPGENLVERLERLATIAASARKRP" gene complement(3250738..3251322) /locus_tag="PA2896" /db_xref="GeneID:882789" CDS complement(3250738..3251322) /locus_tag="PA2896" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /protein_id="NP_251586.1" /db_xref="GeneID:882789" /translation="MHASTSATTAAGSDETLLARYRKGDSAAFEVLYQRHRQGLYRFL CGLAGQTELADEIYQETWLSLIRSESQPQGRASFRTWLYQIARNRLIDHWRKHGQRQP LQDSYDEQLHAQPDQGAGPEQQLSLSRDGERLQSALETLPEEQREVFLMRAHGELELA EIATLTQSPLETVKSRFRYAVQKLRRLLAEEVAV" misc_feature complement(3250744..3251319) /locus_tag="PA2896" /note="RNA polymerase sigma factor; Provisional; Region: PRK12513" /db_xref="CDD:183566" gene complement(3251651..3253090) /locus_tag="PA2897" /db_xref="GeneID:882790" CDS complement(3251651..3253090) /locus_tag="PA2897" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251587.1" /db_xref="GeneID:882790" /translation="MTNLLLYQRIAQQLAEDIRRGVYQPGERVPSVRKLSTQLNVSHA TVLQAYATLEDQGLIRARPQSGFYVHRTPALTAPTPDIARVERPGLVTRSSIINQVLA ESRREGVFPLGAAVPHVDYLPVRALHQQLAKVTRFQSPRAFSYMFSPGFEPLRRQVAI RMRDAGVVVDPSQVTITHGCVDAIHMALRVLTRPGDLIATESPSYYGLLQLADVLGLK VIEIPSDPRTGISLEALQLAANQWSIKALVLTARLSNPFGGTIPEDRQKQLLKLTAEH NIGVVEDDIYGELMFDQGQARSLKSHDRDGRVIYCSSFSKTISPGVRIGWIIAERYQE EIRRLQTFTTHSACTVTQMGVAAYLENGGYDRHLRYIRQEYRKNMTAYQLAVQQYFPE GTQMTRPKGGFILWVSLPAKVNTKELHVRALEQGISIAPGLIFSNTEQFNNCLRLTCG IPWNREAERAIMTLGMLAGQLCQEGLIAA" misc_feature complement(3251678..3253075) /locus_tag="PA2897" /note="DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; Region: ARO8; COG1167" /db_xref="CDD:440781" gene complement(3253312..3253680) /locus_tag="PA2898" /db_xref="GeneID:882567" CDS complement(3253312..3253680) /locus_tag="PA2898" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251588.1" /db_xref="GeneID:882567" /translation="MIRQPRFARFVLPLLLSLCQPSFAAELRAVAEARRQELLLEDSP VACGEVGCTARESLSLVALQVQARVLVTRLGRDDFSPAARQPAAVPDYRLFGDLGLAP SPFAWQALTGESAAADALRF" gene complement(3253766..3254404) /locus_tag="PA2899" /db_xref="GeneID:882568" CDS complement(3253766..3254404) /locus_tag="PA2899" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251589.1" /db_xref="GeneID:882568" /translation="MSSNETLPGLVIADSFPVMQWALQRYLSEECGRQVLAVVGDSDS LVERLADLPPESILITELGLPGQRSRDGIHLVEWLTRHCPQMKVMVYSVFSAPLLAKA VLRSGASAYISKRSPLETLKAALECMALGQTFLDPGLHPQRHTGKPLSPTEVDILRRL ARGDTVSEIAQRTMRSVSTISTHKKNAMVKIGLNSDAELIALGVMNWLHELA" misc_feature complement(3253781..3254377) /locus_tag="PA2899" /note="transcriptional regulator RcsB; Provisional; Region: PRK10840" /db_xref="CDD:182771" gene complement(3254598..3255407) /locus_tag="PA2900" /db_xref="GeneID:882565" CDS complement(3254598..3255407) /locus_tag="PA2900" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251590.1" /db_xref="GeneID:882565" /translation="MPGKATLFATLLACAALAGCADHKLSEQSLAKAQSEFDQVKEDS DVLRAAPKDVIRAGESLARAERLSSYWGSSSDVIQYAYLSQRYSEIARQHALLNLNQE RLTRLQLERERLQLALREAKLLSVQEQGQRLSEEIASLSTEETERGLVLTLGDVLFDF NRAELKPAANRTALKLVQFLQLNPRRVIRIEGYTDSVGDRQANLDLSRERAQAVADVL ADLGVDPARMQVVGYGEAFPVTDNASNRGRAQNRRVEIVFSNDKGQLSAPR" misc_feature complement(3254640..>3255323) /locus_tag="PA2900" /note="peptidoglycan -binding protein; Region: PRK09039" /db_xref="CDD:181619" misc_feature complement(3254634..3254945) /locus_tag="PA2900" /note="Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; Region: OmpA_C-like; cd07185" /db_xref="CDD:143586" misc_feature complement(order(3254652..3254654,3254664..3254666, 3254790..3254792,3254799..3254804,3254814..3254816, 3254823..3254828,3254925..3254930)) /locus_tag="PA2900" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene complement(3255407..3255766) /locus_tag="PA2901" /db_xref="GeneID:882566" CDS complement(3255407..3255766) /locus_tag="PA2901" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251591.1" /db_xref="GeneID:882566" /translation="MSIRWMMAAGLAALTLSGCASNDPAPLEQMRLTEQALEQAKAVG ATDDVAELKLAQDKYAAAQIAMTAESYKKARLLAEQAELDARLAESKVLTQKSKDQLG ELDKSLKRLRKQLGETD" misc_feature complement(3255455..3255685) /locus_tag="PA2901" /note="Domain of unknown function (DUF4398); Region: DUF4398; pfam14346" /db_xref="CDD:464144" gene complement(3255763..3256611) /locus_tag="PA2902" /db_xref="GeneID:882637" CDS complement(3255763..3256611) /locus_tag="PA2902" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251592.1" /db_xref="GeneID:882637" /translation="MSFRCSPCRLAGILLAALFVPGLAAAAGSCERLVATGNPEYPPY LWRDPQDPKRLIGANADLLQRLGKELGVRIDVLYSGSWEKAQEEVTSGRADLLAGAYL TLARLGSMDYMHPPFLMTSGVVWVNKDAAFPFIGRDDLIGHKGSVLAGSSLGEEFDRF AKASLDLKPVPSLTQGLQDLMLKRSEFLLYQALPGQAQVEALGMADDLEALEPVLSSE GLYLTLSHNSACNDPWLRGQLAKKMTELSAAGVPVTLLQDNLERWKAQQLPASGASST TQESDL" misc_feature complement(3255805..3256515) /locus_tag="PA2902" /note="ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:440596" gene complement(3256681..3258360) /gene="cobJ" /locus_tag="PA2903" /db_xref="GeneID:882638" CDS complement(3256681..3258360) /gene="cobJ" /locus_tag="PA2903" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="precorrin-3 methylase CobJ" /protein_id="NP_251593.1" /db_xref="GeneID:882638" /translation="MSDTQQVPAIVILGQGALDTARRVQARYPGALVHGLAGRVEADR SYTDFGDTLRELYCADRPIVALCAAGIVIRSLAPLLQRKGAEPPVLALAEDGSAVVPL LGGLAGVNRLAREIGEVLAVAPAITTSGELRFGTCVLNPPAGYVLADLEQGKRFVADL LGGQPVRVEGAADWLDAARLPRDPEAALAIHVTPSARAPRAEELLIHPRCVLAALEPA DAAADAVRQALVDAGLAAAALGGLLADSARMADPRLQAAADALGVPLRFLPQADPAAR LRQALPAAEQVGDRLAVAAAPLAMDRIGQRRGRLTVIGLGPGCAELMVPAARRALDEA EDILGYQTYVDMAGPFRAGQVLHGSDNREELQRARHAFELAATGRAVVLVSSGDPGVF AMAAAVLEALHGAGEPAWDAVELRIFPGVSAALATAARAGAPLGHDFCVLSLSDNLKP WEVIERRLDLAGAADLAMAFYNPISRARPWQLGRALEIVARHRSPQTLVVLGRDIGRP GERLLRTTLGELRAEQVDMRTLVIIGSSTTRSFPRADGEAWVYTPRWYPSE" misc_feature complement(<3257728..3258336) /gene="cobJ" /locus_tag="PA2903" /note="Cobalamin biosynthesis protein CbiG [Coenzyme transport and metabolism]; Region: CbiG; COG2073" /db_xref="CDD:441676" misc_feature complement(3256684..3257448) /gene="cobJ" /locus_tag="PA2903" /note="Precorrin-3B methylase [Coenzyme transport and metabolism]; Region: CobJ; COG1010" /db_xref="CDD:440634" gene complement(3258353..3259105) /gene="cobI" /locus_tag="PA2904" /db_xref="GeneID:882688" CDS complement(3258353..3259105) /gene="cobI" /locus_tag="PA2904" /EC_number="2.1.1.130" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="precorrin-2 C(20)-methyltransferase" /protein_id="NP_251594.1" /db_xref="GeneID:882688" /translation="MMSVVKGRLLGLGVGPGDPELITLKALRLLRAAPVVGYFVAKGK KGNAFGIIEAHLDQAQVRLPLVYPVTTEKLEPPLCYETIISDFYDTAAEQLAAHLDAG RDVAVICEGDPFFYGSYMYLHDRLATRYESEVVPGVCSMLGGAAVLGAPLVYRNQSLS VLSGVLPEEELRRRLADADAAVVMKLGRNFDKVRRVLVELGLERRALYVERATMANQR IVPLERVEPMASPYFSLIVVPGDKWQGGAGGE" misc_feature complement(3258371..3259093) /gene="cobI" /locus_tag="PA2904" /note="precorrin-2 C(20)-methyltransferase; Reviewed; Region: PRK05990" /db_xref="CDD:180341" misc_feature complement(order(3258401..3258409,3258470..3258481, 3258554..3258559,3258617..3258619,3258674..3258676, 3258686..3258691,3258755..3258763,3258770..3258778, 3258833..3258835,3259058..3259060)) /gene="cobI" /locus_tag="PA2904" /note="putative active site [active]" /db_xref="CDD:381172" misc_feature complement(order(3258401..3258412,3258470..3258475, 3258479..3258481,3258551..3258556,3258674..3258676, 3258686..3258691,3258755..3258763,3258770..3258778, 3259058..3259060)) /gene="cobI" /locus_tag="PA2904" /note="SAM binding site [chemical binding]; other site" /db_xref="CDD:381172" misc_feature complement(order(3258569..3258574,3258596..3258598, 3258617..3258637,3258650..3258661,3258668..3258673, 3258677..3258685,3258689..3258700,3258704..3258706, 3258737..3258739,3258743..3258748,3258758..3258772, 3259025..3259027,3259031..3259051)) /gene="cobI" /locus_tag="PA2904" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:381172" gene complement(3259102..3259728) /gene="cobH" /locus_tag="PA2905" /db_xref="GeneID:882689" CDS complement(3259102..3259728) /gene="cobH" /locus_tag="PA2905" /EC_number="5.4.99.61" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="precorrin-8X methylmutase" /protein_id="NP_251595.1" /db_xref="GeneID:882689" /translation="MIDYIRDGQAIYRQSFATIRAEANLAGIPADLEKLAVRVIHACG MVDVVDDLRFSPGAGAAGRAALAAGAAILCDARMVAEGVTRSRLPAANRVICTLNEAD VPALATELGNTRSAVALEHWREHLEGSVVVIGNAPTALFYLLEMLDAGAPKPALILGF PVGFVGAAESKEMLAADSRGVPYVIVRGRRGGSAMAAAAVNALATERE" misc_feature complement(3259150..3259728) /gene="cobH" /locus_tag="PA2905" /note="precorrin-8X methylmutase; Reviewed; Region: cobH; PRK08285" /db_xref="CDD:181352" protein_bind 3259699..3259711 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(3259725..3261185) /locus_tag="PA2906" /db_xref="GeneID:882651" CDS complement(3259725..3261185) /locus_tag="PA2906" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_251596.1" /db_xref="GeneID:882651" /translation="MPTSGGVYRCRGLSLGDSGAVAATPIRVAFLNDDQTPAPLPVPR PSPCPGLLRIVQALDGGICRIKLDAGRLDAAQARAVAAAARDCASGVIETTNRSNLQL RGVRRGEEERLVRRLLDAGLGPRHGSLAGADDVRNLMLSPAAGLDPHLSLDVRPLAAR LLLRLQADSRYHALSAKFAIQLDGGEDLAMLEHPHDIWLSPMPAAPTATLVFGLAGCP ARDRPLAALPAERGESLVLALLDLFLERAQPQQTRMRHLLQELDGEPLLEALQARLDF PLRRDERVAAWRRSPGRPWSHLGVQPQRQPGLVMVGAAAPLGRLDSACLEGLAELVER HGDGSLRLTPWQGVLLPNLAHAEADQALLGLRGLGLLTEPDAPLARLIACSGSSACAR GLADTKGDALRLAERLGPRSDLPQLHLCGCERSCAAAHRAPLTLLARSGGFYDLYRHD PCHPGFGQLLASRLTFATAADYLAALPSQPTSGKPA" misc_feature complement(3259857..3261056) /locus_tag="PA2906" /note="ferredoxin-nitrite reductase; Reviewed; Region: nirA; cl47135" /db_xref="CDD:481475" gene 3261522..3262769 /gene="cobL" /locus_tag="PA2907" /db_xref="GeneID:882678" CDS 3261522..3262769 /gene="cobL" /locus_tag="PA2907" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="precorrin-6y-dependent methyltransferase CobL" /protein_id="NP_251597.1" /db_xref="GeneID:882678" /translation="MSSADSTPPWLTLVGIGEDGYPGLGKQARRALLQASRIVGAARQ LELLPPCIGAARETWPTPFSLEPLLARRGQPTCVLASGDPMLFGVGASLARQLPATEL RVLPAPSSLSLAAARLGWALQEVACLSLVARPLAALQAQVHDGRRLLVLSNDGDSPAA IARLLNARGFGASRLSVLEHLGGPLERRLDGLAGDWSLPRAADLNLVAVECRAGAGAV RLPLTPGLADEAYRHDGQLTKRDVRAVTLARLAPCPGELLWDVGAGCGSIGIEWMRAH PSCRAIAIEANDERQEHIRHNRDALGVPTLHLVAGSAPEALLELPEPDAIFIGGGVTA EGVLETCWERLRPGGRLLANAVTLQSERVLLDWQQRLGGDLTRLGVAHARPLGGFDTW RQALPITLLELRKPAARKPPRDA" misc_feature 3261543..3262742 /gene="cobL" /locus_tag="PA2907" /note="Precorrin-6B methylase 2 [Coenzyme transport and metabolism]; Region: CobL; COG2242" /db_xref="CDD:441843" gene 3262762..3263862 /gene="cbiD" /locus_tag="PA2908" /db_xref="GeneID:882679" CDS 3262762..3263862 /gene="cbiD" /locus_tag="PA2908" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cobalt-precorrin-5B C(1)-methyltransferase" /protein_id="NP_251598.1" /db_xref="GeneID:882679" /translation="MREETPEQPAPLRSGYTTGSCATATSLAAARLLLGGTISDAVQI VLPKGQQVLMRLEFCRAWENGAEAGTLKDAGDDPDVTHGALVFARVRLSAEPGVRFHA GPGVGTVTRPGLTLAVGEPAINPVPRQMIERHLAQLAAERGYAGGFEVAIGVEGGAEL ALKTMNPRLGILGGLSILGTSGIVRPFSCSAYIASIHQGIDVARANGVRHIAACTGNA SEDAMRRRYALPEIALIEMGDFAGAVLKHLRRAPVEKLSLCGGFGKISKLAGGHLDLH SRHSSIDLPQLAGWAAALGASTALQDSMRAANTSQQALAQAHAEGVALGDAVCAHALR FARGIVPTEVALEVFAIDRQGNLVGQACEERR" misc_feature 3262762..3263844 /gene="cbiD" /locus_tag="PA2908" /note="Cobalamin biosynthesis protein CbiD (cobalt-precorrin-5B C-methyltransferase) [Coenzyme transport and metabolism]; Region: CbiD; COG1903" /db_xref="CDD:441507" gene 3263859..3264587 /locus_tag="PA2909" /db_xref="GeneID:882686" CDS 3263859..3264587 /locus_tag="PA2909" /EC_number="1.3.1.54" /EC_number="1.3.1.-" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="cobalt-precorrin-6x reductase" /protein_id="NP_251599.1" /db_xref="GeneID:882686" /translation="MKRLLLLGGIGEALALARRLGPAHLYSLAGLGKVPGDLACRVRV GGYGGAEGLAAFIDEQGFDLLVDATHPYAARISQNAVRAARLAGVPCWALRRPGWQAG PGDDWREVADWRELIAALTPFRRPLFTLGREPLEHLGQVPPHQHWTVRCLQGQPAAPR AEVIGARGPFSLDGERALFERLACDVLVSKNSGSQATEPKLQVAREMGLPVLVLARPA LPPADREFADGEALLTAIRDWESA" misc_feature 3263859..3264575 /locus_tag="PA2909" /note="cobalt-precorrin-6x reductase; Reviewed; Region: PRK08057" /db_xref="CDD:236144" gene complement(3264642..3265211) /locus_tag="PA2910" /db_xref="GeneID:882687" CDS complement(3264642..3265211) /locus_tag="PA2910" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="manganese efflux pump MntP" /protein_id="NP_251600.1" /db_xref="GeneID:882687" /translation="MNPVSLIFLAFAMSTDAFAAAIGKGSSLDRPRLSEALRTGIIFG VIEAITPLVGWLLGQAASQFVADWDHWIAFVLLVLLGLHMIHNGLRADHATEQEKPGQ HSFWILAVTALATSIDALAVGVGLAFVDVNIFLAAGAIGLATMTMVTLGTMLGRALGA VTGKRAEMVGGVVLILVGATILYEHLSAA" misc_feature complement(3264663..3265211) /locus_tag="PA2910" /note="Putative Mn2+ efflux pump MntP [Inorganic ion transport and metabolism]; Region: MntP; COG1971" /db_xref="CDD:441574" gene 3265848..3268004 /locus_tag="PA2911" /db_xref="GeneID:882591" CDS 3265848..3268004 /locus_tag="PA2911" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="TonB-dependent receptor" /protein_id="NP_251601.1" /db_xref="GeneID:882591" /translation="MPRFSRLRTEPFALGLSTSLLLVPPALAETEEAALALPSQLVSV RQDPAELDHIDLATPVSAGSRLGLSALDTPASTSSISGEEVRRRNNPSVQAAVTRSPG ISFIGTPGDGGTGLSARGFSGHASVMQLFDGTRLYTGMGTVNFPSDPWMVERIDVIRG PASVLYGEGATGAVINVVPKKPFAGEIRNHLRLGYGSYDNRQLALDSGGSLTDSLSYR LNLNQQQSHGWIDRGDSRNLGISAALRWQASDDLAFTLAHDYGDQEPMNDFGTPLVGG KYHKRLREKNYNVRNDVQRYNDQWTRLTSDWSLSDSVTASNQLYYIKARRHWRNAETY EWDVPREELLRRDYLRISHEQEQIGDRQTFAFQHALFGLDSRTLVGAEYNRIRFRLSN NSPYTDVGGDYIDPWHPAPGYFESRSPYRPHSRSQTRTFALFAENRLQLNERLSLVTG VRRDQNHIDRDDLRAGTRSDRSLQGGNWRAGLVFALTPELSLYGQYSTSEDGVSNLIT LNAAQQQMDLTHSKQTEVGLKQLFPDGRGEWTLAAYHIVKKKLLSANPLPPHDAQQVG QQSSDGLEASLELNLAQDWRLSANAALVRAEYDDFDETIDGQTYSRNGNRPRNVPRRT ANLWLDKSFAETLRVGAGLRYVDRRYADAANQASLPGYTVVDANLGWRVRPDLTLGLE LYNLFDRQYALADNNNGQQWIVGQPRSFNVTADFSF" misc_feature 3266040..3268001 /locus_tag="PA2911" /note="Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; Region: Fiu; COG4774" /db_xref="CDD:443806" gene 3268057..3268830 /locus_tag="PA2912" /db_xref="GeneID:882592" CDS 3268057..3268830 /locus_tag="PA2912" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_251602.1" /db_xref="GeneID:882592" /translation="MSSLHLDALHWSPDASTELLRGVHLEVPAGSFVGLIGPNGSGKT SLLRCAFRYARPQRGRVVLDGDDLWRQPPRWAARRIAVVLQEFPEDFGLAVEDVVAMG RTPHKGLFDGHGADDRQRVRQALLQVGLEGRAASPFASLSGGEKQRALLARALVQEPR LLILDEPTNHLDPRYQLELLRLLRSLGLSTLASFHDLNLAAAFCDRLYVLDGGRIVAQ GTPTEVLDADLLWRVFGVRALVDRHPLADHPRLTWITQA" misc_feature 3268066..3268803 /locus_tag="PA2912" /note="ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component [Inorganic ion transport and metabolism, Coenzyme transport and metabolism]; Region: FepC; COG1120" /db_xref="CDD:440737" gene 3268827..3269798 /locus_tag="PA2913" /db_xref="GeneID:882645" CDS 3268827..3269798 /locus_tag="PA2913" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251603.1" /db_xref="GeneID:882645" /translation="MKHPILHHLLLGALLACADAALAERYPLSVRSCEREVTFERAPS RAVSHDINLTEMMVALGLQTRMVGYTGISGWWKNADPGLIAALKPLPELVARYPTAET LLDVDADFFFAGWGYGMRVGGDLTPASLEPLGVKVYELSESCAQIGEPRRASLDELYR DLRNLGRIFDVEPRAERLVASLQARIERARAGIPANAEAPRVFLYDSGEDRPFTSGRL GMPQALIEAAGGRSVTDDVAASWTQVNWESVVARDPQVIVIVDYGETSAAQKQRFLEE NPALRSLTAIRERRFIVLPYNQATPGIGNAAAIETLVAGLHPRAPRP" misc_feature 3268902..3269762 /locus_tag="PA2913" /note="Metal binding protein TroA_a. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and...; Region: TroA_a; cd01148" /db_xref="CDD:238568" misc_feature 3269073..3269075 /locus_tag="PA2913" /note="putative ligand binding residues [chemical binding]; other site" /db_xref="CDD:238568" gene 3269795..3270826 /locus_tag="PA2914" /db_xref="GeneID:882646" CDS 3269795..3270826 /locus_tag="PA2914" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_251604.1" /db_xref="GeneID:882646" /translation="MTLFRSPRAYCLLLGSLVMLLGLSCVVALGFGPARLDSGLVGRI VLQRLFGVAAEPGAWSAGQEHIVWLIRAPRVLLGACVGAGLALVGAALQAVTRNPLAD PHLLGATSGATLGAVLVVLYIGEVIGLLTLPLAAFLGALGSMLLVLGVASRGGRLGSD RLLLAGVAVSFVLLALANLLLFLGDHRAASSVLFWMLGGLGLARWSLIWLPALCVAGG LLVLLGLGRALNALMAGEQTAVTLGLDARRVRLWVFICCSLLTGVLVSVSGAIGFVGL MLPHAARLLVGAEHRRLLPVCALLGALFLVWMDVAARTLIAPQDLPIGIATAAIGGLF FILLLRRRS" misc_feature 3269876..3270820 /locus_tag="PA2914" /note="ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]; Region: FepD; COG0609" /db_xref="CDD:440374" gene complement(3270827..3271693) /locus_tag="PA2915" /db_xref="GeneID:882596" CDS complement(3270827..3271693) /locus_tag="PA2915" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251605.1" /db_xref="GeneID:882596" /translation="MLKPDITAFFDPATSTYSYVVRDPSSRACAIVDPVLDYDPAAGR TSHASAERLIAHVRQHDLQVEWLLETHVHADHLSAAIFLQRELGGCLAIGARITQVQA KFSGLFNLGEAFPVDGRQFEHLFEDGESFRIGALECRALHTPGHTPACMTYLVGDSAF VGDTLFMPDYGTARCDFPGGDARQLYRSIQRLFALPDATRLFMCHDYTAPGRDEHRCE TSVGEQRRHNVHVREGVDEEAFVAMRQQRDATLGMPTLMLPAIQVNMRGGNLPPVEGN GVRYLKIPLDLF" misc_feature complement(3270830..>3271687) /locus_tag="PA2915" /note="bifunctional sulfur transferase/dioxygenase Blh; Region: bifunc_ST_SDO; NF040641" /db_xref="CDD:468609" gene complement(3271813..3272406) /locus_tag="PA2916" /db_xref="GeneID:882597" CDS complement(3271813..3272406) /locus_tag="PA2916" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251606.1" /db_xref="GeneID:882597" /translation="MQSLVPFLLFAVVASITPGPTNILVLSNSQRHGLAAAWPIVLGA CAAVAALILLLGLGLGELLRRHPLLQQGLAWLGVGWLSYLAWSLFRSAGGIDGAEPPR RLGVLGGAALQLVNPKAWMMALAALALFAGEGAGQAGRIGLLALLFFLVSLPCLASWA LLGVGSARLLRSPSLMKRFNQGMALLLLASAWAALLL" misc_feature complement(3271858..3272406) /locus_tag="PA2916" /note="Threonine/homoserine/homoserine lactone efflux protein [Amino acid transport and metabolism]; Region: RhtB; COG1280" /db_xref="CDD:440891" gene complement(3272457..3273293) /locus_tag="PA2917" /db_xref="GeneID:882557" CDS complement(3272457..3273293) /locus_tag="PA2917" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251607.1" /db_xref="GeneID:882557" /translation="MGSRDWIDLARDAETGIETLRAHFEGHAYDPHWHDSYLIGYTEI GVQQFNCRRRRHDSTAGQVFLVEPGEIHDGRAPIAGGFTYSMLYLQPDWLRRELRATF DDAPSDRDPGFHANLTEDPRLTLAIAQAFRVLHGRELRLLRQTALELVLERLRVHLGW REAKPFDPRLPLVAQKARDYLHAHFYQDIGLDELASACGTDRFRLNRAFKAAYGLPPY AYLVQLRLAKARQMLAVGGQPADLASALGFADQSHLGRWFRRAYGMTPAAYRRQCTQL PD" misc_feature complement(3272841..3273248) /locus_tag="PA2917" /note="AraC-like ligand binding domain; Region: AraC_binding; pfam02311" /db_xref="CDD:396749" misc_feature complement(3272484..3272732) /locus_tag="PA2917" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene 3273504..3274277 /locus_tag="PA2918" /db_xref="GeneID:882558" CDS 3273504..3274277 /locus_tag="PA2918" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_251608.1" /db_xref="GeneID:882558" /translation="MVDHSIKGKTVLITGGAKNLGGLIARDLAAHGAKAITIHYNSAA SKADADATVAALQAAGAKAVALQGDLTSAAAMEKLFADAIAAVGKPDIAINTVGKVLK KPITEISETEYDEMSAVNSKSAFFFLREAGKHVNDNGKICTLVTSLLGAYTPYYAAYA GTKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPAEGADAVDYLKNAAALSPF SKTGLTDIDDVVPFIRHLVSEGWWITGQTILINGGFSTK" misc_feature 3273504..3274274 /locus_tag="PA2918" /note="SDR family oxidoreductase; Region: PRK12744" /db_xref="CDD:183716" gene 3274328..3274585 /locus_tag="PA2919" /db_xref="GeneID:882571" CDS 3274328..3274585 /locus_tag="PA2919" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251609.1" /db_xref="GeneID:882571" /translation="MHVTLVIAGGIVLLGLFLLFGKLWDAGPALAAGLFLPTWLAVAL VNLWVGVQHAGYGLREELPILLLVFLVPAALAGVAIWLAPR" gene complement(3274597..3276234) /locus_tag="PA2920" /db_xref="GeneID:882572" CDS complement(3274597..3276234) /locus_tag="PA2920" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_251610.1" /db_xref="GeneID:882572" /translation="MLQWFANLSFRRKIALPILLLAVLLLLVGALGVHGIAQLNESNQ RLGKRFLPGIALLLNADRDLYQAFVAERSLLEGHLSAEQIAGLRNDHAENLQQALDRV RQYAAMQPGEAELAKVAEFERGYALWSATSARVLSLAASDPSAAAQLSYGDSDRQFGA MREVINQLDEMEEAAAAADGEASSALGERHRWQQVALVAFGLLVCLSLVLVFPGLVTR PLQRLLQRLEEIANGDGDLRVRLEVTSRDEPGRLGSAFNAFLDKLQPLIREVGRVTGE VADSAGSLAGMTAANDRLINSEHASVDQVSTAATQMSSAVHEVARNAQSAAQVADDAR RQAREGANVVEATIEVIRQLAQEVESSSESIQQLAQETASIDAVLTVIKGIAEQTNLL ALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTKDIQARIERLQAGVQNAVRAMQ SGSLKARDSVERAAGVDGVLAATGDAVGRINDLAAQIASACEEQSRVIDEIARNISEV RELSAQAAEHSEQGTGASRRLSELSSELARLVGRFRV" misc_feature complement(3274600..3276129) /locus_tag="PA2920" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene complement(3276319..3277308) /locus_tag="PA2921" /db_xref="GeneID:882626" CDS complement(3276319..3277308) /locus_tag="PA2921" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251611.1" /db_xref="GeneID:882626" /translation="MMTTFRCHLGKPVKLHQLQALVASADAGGIRAAARALGISQAAV TRALRELETEQHLPLFVRTPSGLTFTEYGKALLIHARLVLKQLEHAQVELDHLRGQAS GRLCIGVTPWVALTFLSEAVQAFRERMPEVRLELFESLMAVAQPLLRDGSMDFAIGPL HGAQAAQEFACEKLLDYDTAVLVRQGHPLAGCGSIHELLEQDWALNYTGDGHDALMRE LFWRHGALIDERRIVRAHSVAILQTLVEQADMCTWVPAIIGAAPPLLGRVVPLALRET FEPRRLGIITRRGGALSNPAQCFVECLLQAIRRHARSAKKDDRRLFETLRLLV" misc_feature complement(3276382..3277200) /locus_tag="PA2921" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 3277409..3278578 /locus_tag="PA2922" /db_xref="GeneID:882627" CDS 3277409..3278578 /locus_tag="PA2922" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_251612.1" /db_xref="GeneID:882627" /translation="MTEPAVLPAIAALREEMVTLRRHIHAHPELGFEERRTAALVAEC LEAWGYQVSRGVGRTGVVGTLCRGEGPALGLRADMDALPIQEATGLPYASQVDGVMHA CGHDGHTAMLLAAARHLVESPHWRGTLQLIFQPAEEGLGGARAMLDDGLLERFPCDAI FAMHNVPGYPVGHLGFHPGPFMASADTVVIRVIGSGGHGAVPQRTVDPVVVCSAIVLA LQSIVSRNVDPQDTAIVSVGAIHAGTVSNVIPASAEMILSVRALTAETRALLERRIGE LARGQAASFGARAEVDYRHCHPVLVNHPGQTAFAREVARDWLGEECLIDGLRPFTASE DFAFILERCPGSYLVIGNGQGESGCQLHNPGYDFNDDCLAVGASYWVRLAERFLA" misc_feature 3277451..3278566 /locus_tag="PA2922" /note="M20 Peptidase aminoacylase 1 subfamily; Region: M20_Acy1-like; cd05666" /db_xref="CDD:349916" misc_feature order(3277715..3277717,3277721..3277723,3277820..3277822, 3277898..3277900,3278492..3278494) /locus_tag="PA2922" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:349916" misc_feature order(3277967..3277969,3278033..3278038,3278048..3278050, 3278057..3278059,3278066..3278068,3278117..3278137, 3278147..3278152,3278156..3278158,3278174..3278182) /locus_tag="PA2922" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:349916" gene 3278638..3279423 /gene="hisJ" /locus_tag="PA2923" /db_xref="GeneID:882695" CDS 3278638..3279423 /gene="hisJ" /locus_tag="PA2923" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="histidine ABC transporter substrate-binding protein HisJ" /protein_id="NP_251613.1" /db_xref="GeneID:882695" /translation="MTRTLGSIALSLLLAAPAGAADWTGKVLRLGVDPTYPPLEYKQP DGRLAGFGIEIGEALCAELRARCEWVESNWDGIIPALLSRKIDAIVSSMTITPKRAQH IAFTDRVSNAPSRLVVRRGSALLPDAESLRGKRVGVGQGSNQEAYAKAEWAAKGVRVV SYQNQDQVYADLVMGRLDASLQGAVQASYGFLDKPVGKDFELAGAVLDDPRYFGVGDG IGLRKEDVALREDLNKALATIRANGTYARINARYFDFDLYGTP" misc_feature 3278713..3279396 /gene="hisJ" /locus_tag="PA2923" /note="Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold; Region: PBP2_HisJ_LAO; cd13703" /db_xref="CDD:270421" misc_feature order(3278734..3278736,3278743..3278745,3278857..3278859, 3278908..3278910,3278914..3278919,3278932..3278934, 3279052..3279054,3279061..3279069,3279184..3279186) /gene="hisJ" /locus_tag="PA2923" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:270421" gene 3279479..3280168 /gene="hisQ" /locus_tag="PA2924" /db_xref="GeneID:882696" CDS 3279479..3280168 /gene="hisQ" /locus_tag="PA2924" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="histidine ABC transporter permease HisQ" /protein_id="NP_251614.1" /db_xref="GeneID:882696" /translation="MFLDGFGPQILAGTLVTLKLALGSLLGAVLIGLLGASAKLAANR PLRALASGYTTLIRSVPDLVIMLLLFFSLQILLNRVTDALGIGQVDIDPFAAGCVTLA FIYGAYFTETFRGAFQAVPAGQVEAAQAYGMGRWRVFRRVLLPQMLRYALPGIGNNWQ VLVKSTALVSIIGLGDLVKATQDAGKGTLQFFHFTLVCGLIYLAITAISNAALLWLER RSSLGVRRPLP" misc_feature 3279479..3280156 /gene="hisQ" /locus_tag="PA2924" /note="ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; Region: ArtQ; COG4215" /db_xref="CDD:443361" gene 3280165..3280878 /gene="hisM" /locus_tag="PA2925" /db_xref="GeneID:882577" CDS 3280165..3280878 /gene="hisM" /locus_tag="PA2925" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="histidine ABC transporter permease HisM" /protein_id="NP_251615.1" /db_xref="GeneID:882577" /translation="MNAVLDEYWQAYLWTDGLQLTGLAMTLWLLILAVALGFLLAIPL AVARTCGNPLLRYPVWLYTYVFRGTPLYIQLLFFYTGVYSLNAIRAQDFLNAFFRDGF NCTVLAFVLNTCAYMTEIFAGAIRNTPHGEVEAARAYGMGGFTLYRRIVLPSALRRAL PYFSNEVILMLHSTSVAFTATVPDLLKVARDVNSATYAPFLSFGIAGALYAGTAFLLI WLFRRGELRWLAYLRPQTH" misc_feature 3280165..3280866 /gene="hisM" /locus_tag="PA2925" /note="histidine ABC transporter permease HisM; Region: PRK15069" /db_xref="CDD:185029" misc_feature order(3280279..3280284,3280291..3280296,3280309..3280311, 3280339..3280350,3280354..3280383,3280390..3280395, 3280399..3280401,3280495..3280500,3280504..3280506, 3280510..3280512,3280519..3280524,3280528..3280530, 3280540..3280545,3280552..3280554,3280603..3280605, 3280645..3280650,3280657..3280659,3280678..3280689, 3280696..3280701,3280738..3280743,3280771..3280776, 3280783..3280788,3280792..3280797,3280804..3280809, 3280816..3280821) /gene="hisM" /locus_tag="PA2925" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(3280357..3280401,3280678..3280695) /gene="hisM" /locus_tag="PA2925" /note="conserved gate region [active]" /db_xref="CDD:119394" misc_feature order(3280399..3280401,3280480..3280482,3280696..3280698, 3280732..3280734,3280741..3280743,3280771..3280773) /gene="hisM" /locus_tag="PA2925" /note="putative PBP binding loops [active]" /db_xref="CDD:119394" misc_feature order(3280555..3280593,3280609..3280614,3280624..3280626) /gene="hisM" /locus_tag="PA2925" /note="ABC-ATPase subunit interface [active]" /db_xref="CDD:119394" gene 3280899..3281666 /gene="hisP" /locus_tag="PA2926" /db_xref="GeneID:882578" CDS 3280899..3281666 /gene="hisP" /locus_tag="PA2926" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="histidine ABC transporter ATP-binding protein HisP" /protein_id="NP_251616.1" /db_xref="GeneID:882578" /translation="MYSLQVEDIHKRYGSHEVLRGVSLRAGKGDVISIIGSSGSGKST FLRCVNFLEKPCAGHIRVGDEELRTRPGALGELRAADPRQLQRIRSRLAMVFQHFNLW SHLTVLENVVECPVNVLRMNRDDAVARARHYLAKVGLAEKVERQYPCELSGGQQQRVA IARALAMEPQVMLFDEPTSALDPELVGEVLKVMQQLAEEGRTMVLVTHEMAFARQVSS HVIFLHQGVIEEEGTPDQVFGAPRSERLRQFLAGNLK" misc_feature 3280902..3281663 /gene="hisP" /locus_tag="PA2926" /note="ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]; Region: HisP; COG4598" /db_xref="CDD:443652" gene 3281988..3283319 /locus_tag="PA2927" /db_xref="GeneID:882676" CDS 3281988..3283319 /locus_tag="PA2927" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251617.1" /db_xref="GeneID:882676" /translation="MPRSIVIVHGWSDDSKSFRRLAEQLEAWFGSAPTQIRLTDWISL QDDVTYADLAAALDRAWTAQGLSRAPRTVDVVVHSTGTLVLRDWLTRHFDPASAPVKR FLMLAPANFGSPLAHKGRSFIGRVLKGWNRFVGQTGTQVLKGLELGSPYSWQLAERDL FGAEAWYGADRLLATVLVGNVGYSGVEAIANEAGSDGTVRIATANLNACRLSLELDVR QRARPGWRLEESRGEIAFAIVDGENHASVALKDRGPKNPHTLELIRAALEVEDADYRS SGASFPWQRRIDQLDPGIERRSPRYLNLVSHVCDDLDQEVRDYFIQFFRKLNSDRRFE QRFYEQVIADVHPYEDNPAYRSLYLSIESLDDLLAGFAVDTLSLSVSAQPPFDPPRQP VGYTAVGPGDSEGLAIPLAQVPRFLAAHRTLLLRIRLTRLVDSGVFVFRNP" misc_feature 3281988..3282317 /locus_tag="PA2927" /note="Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and metabolism]; Region: EstA; COG1075" /db_xref="CDD:440693" gene complement(3283375..3284598) /locus_tag="PA2928" /db_xref="GeneID:882677" CDS complement(3283375..3284598) /locus_tag="PA2928" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251618.1" /db_xref="GeneID:882677" /translation="MPTTSAATTGGSGELLGQSSRYLFFLRNELYVLDRRDAAPALAF DELERRTGGLPLKSAPWGKDAYRYDEGRGGLLMLALDGRVWFLDGDSLALREAPEVDA ARYFHGDPPPPANAGIDWQAPGLTRLPDGRLLILASDHEARALERGEALPAANQRARR QRLSLGTLDWRSPAENRLRPLLDAAFLQAGLLPDPAAAEEPQRLLERPSERQRQHPSL PPEPQPPEEFDERVERFPSTRAFLAARDAYRQERRRWIAAHDAWRERVADLEAAADAE YRRRRDEQTREEALYRRYASALPGGDSRLARRPWRVDGNWLVLHRRSLAERSELLLSS VSGDGSLLWTLELPIERPERLFRLDAHNLLLSGRGEEGGRLVRVDLRRGSGIVHRLGR GGAPLQRVEWPEGQP" misc_feature complement(3283447..>3284574) /locus_tag="PA2928" /note="PA2928 family protein; Region: PA2928_fam; NF041516" /db_xref="CDD:469402" gene complement(3285007..3285621) /locus_tag="PA2929" /db_xref="GeneID:882798" CDS complement(3285007..3285621) /locus_tag="PA2929" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251619.1" /db_xref="GeneID:882798" /translation="MTELLAFLTITVLAVISPGADFAMVSRNSLLYSRRAGLLTALGI GAGVTVHVGYSILGVGVLVRESLALFTALKLAGAAYLVFLGLRMLLAREDSVAEEAAG GAGVSSWAMLRSGFLTNALNPKTCLFVVSLFMQVIDPHTALPAQLGYGAFIALAHVAW FGLVACFLSSPAVRGRLLRFRRRIDQFFGALLVGFGVLLGAKSP" misc_feature complement(3285025..3285573) /locus_tag="PA2929" /note="LysE type translocator; Region: LysE; cl00565" /db_xref="CDD:444980" gene 3285687..3286613 /locus_tag="PA2930" /db_xref="GeneID:882799" CDS 3285687..3286613 /locus_tag="PA2930" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251620.1" /db_xref="GeneID:882799" /translation="MNTDNHGEENSPFRRRRLPSLNALRCFEAAARLENFSRAAEALC LTHGAISRAVRTLEEELGCALFERRGQRVFLSEAGRRLLAGTGPALDLIERTSETLRA EAGPTALVLSCEPTLLMRWLIPRIAGFMQEQPRLSIQLVAGGGPFAFGHGIDLAIRRN DFLWPPGSHAHWLFDEQVGPVCRASDVERHFHLDAGPPGLRAVAPRLHTATRPQAWNT WTRLAGQAPATTEGQRFEHFYLSLQAAGAGLGVAIGPWQLVRDDLSAGLLAAPLGFLA DGSSYHLLTPRPLQAGEPATLLLEWLRRSAAA" misc_feature 3285747..3285926 /locus_tag="PA2930" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 3286008..3286592 /locus_tag="PA2930" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" misc_feature order(3286053..3286058,3286062..3286067,3286074..3286076, 3286086..3286088,3286092..3286112,3286380..3286397, 3286413..3286418,3286422..3286427) /locus_tag="PA2930" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene complement(3286624..3287214) /gene="cifR" /locus_tag="PA2931" /db_xref="GeneID:878998" /db_xref="PseudoCap:PA2931" CDS complement(3286624..3287214) /gene="cifR" /locus_tag="PA2931" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="CifR protein" /protein_id="NP_251621.1" /db_xref="GeneID:878998" /db_xref="PseudoCap:PA2931" /translation="MATRGRPRAFDRDTALQRAMDVFWVRGYEGASLAALTEAMEIRP PSLYAAFGSKEGLFREALAHYLGQHGRYRRDVLDGAPSAREGVAELLRETVARFCSDE FPRGCLVVLAALTGTPESEAVRDALSAERGESIRLFRERMRRGIADGDLAADTDVEEL ATFYATVLFGLSVQAKDRVPCERLLAVVERALRAWP" misc_feature complement(3286705..3287199) /gene="cifR" /locus_tag="PA2931" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene 3287340..3288449 /gene="morB" /locus_tag="PA2932" /db_xref="GeneID:878999" CDS 3287340..3288449 /gene="morB" /locus_tag="PA2932" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="morphinone reductase" /protein_id="NP_251622.1" /db_xref="GeneID:878999" /translation="MSNLLLSPLAVGNLALRNRIVMAPMTRSRAQQPGDVPTALNALY YAQRAGAGLIVSEGTQISHLGQGYAYTPGIYSEAQLAGWRQVTEAVHAAGGLIAAQLW HVGRMSHRSLQAGGEAPIAPSPIQAKAQVFIADGQGGGSMAPADAPREMTLEDIRRVR DEFVRAARNALDAGFDLVELHGANGYLIDQFLASASNRRSDAYGGSLENRARFLLEIV DALVAAVGAERVGLRLSPWGTINDMHDDEPEAMTLYLAEALQRRGIAYLHLAEWEWSG GPAYPQGFRERLRERFRAPLIVCGNYDAERAEAILQAGLADAVAIGRPFIANPDLVER IRLGAPLAEANQARFYGGDAAGYTDYPTLGQSATA" misc_feature 3287352..3288377 /gene="morB" /locus_tag="PA2932" /note="Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a...; Region: OYE_like_FMN; cd02933" /db_xref="CDD:239243" misc_feature order(3287409..3287411,3287415..3287417,3287511..3287513, 3287637..3287639,3288036..3288038,3288237..3288239, 3288297..3288299,3288303..3288311) /gene="morB" /locus_tag="PA2932" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:239243" misc_feature order(3287409..3287411,3287415..3287417,3287511..3287513, 3287637..3287639,3287643..3287645,3287664..3287666, 3287880..3287882,3287889..3287891,3287895..3287897, 3288036..3288038,3288057..3288059,3288237..3288239, 3288297..3288299,3288303..3288308) /gene="morB" /locus_tag="PA2932" /note="active site" /db_xref="CDD:239243" misc_feature order(3287415..3287417,3287643..3287645,3287880..3287882, 3287889..3287891,3287895..3287897,3288306..3288308) /gene="morB" /locus_tag="PA2932" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:239243" misc_feature 3287895..3287897 /gene="morB" /locus_tag="PA2932" /note="catalytic residue [active]" /db_xref="CDD:239243" gene 3288515..3289693 /locus_tag="PA2933" /db_xref="GeneID:882658" CDS 3288515..3289693 /locus_tag="PA2933" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_251623.1" /db_xref="GeneID:882658" /translation="MLLPILLLAAAGFTILTTEFVIVGLLPALAADLQVSVAQAGLLV SLFAFSVAAFGPFLTAALAGVERKRLFVACLLLFAAANALAAVAGDIWTMAVARFVPA LALPVFWAMASETAAHLAGPSREGRAVALVFFGIVAATVLGIPIGTLIADAWGWRLAF AALAALALAKALLLAAWLPRIPGRPGISLRSQASVLRQPLVLGHLLLSLLVFTGMFTP YTYLADILQRLAGFSGSLVGWTLMGFGAVGLLGNWLGGRLVDRSPLGATLLFVLLMAL GMLALVPTLGNAWLLAATLATWGVAQAALFIVGQVRVMKSAPRAPAFAASLNISACNA GIGIGALAGSRVIDGSGLAPLGEVGALVCLAAMAVALLLMLAPRQAATEPSLGGQIPH " misc_feature 3288548..3289603 /locus_tag="PA2933" /note="Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; Region: MFS_NepI_like; cd17324" /db_xref="CDD:340882" misc_feature order(3288557..3288562,3288569..3288574,3288581..3288583, 3288677..3288679,3288827..3288832,3288836..3288844, 3288851..3288853,3288911..3288913,3288920..3288925, 3288932..3288934,3289136..3289138,3289145..3289150, 3289157..3289165,3289172..3289174,3289256..3289258, 3289268..3289270,3289415..3289420,3289430..3289432, 3289442..3289444,3289487..3289489,3289496..3289501, 3289508..3289513,3289520..3289522) /locus_tag="PA2933" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340882" gene 3289715..3290674 /gene="cif" /locus_tag="PA2934" /db_xref="GeneID:882654" /db_xref="PseudoCap:PA2934" CDS 3289715..3290674 /gene="cif" /locus_tag="PA2934" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="CFTR inhibitory factor" /protein_id="NP_251624.1" /db_xref="GeneID:882654" /db_xref="PseudoCap:PA2934" /translation="MILDRLCRGLLAGIALTFSLGGFAAEEFPVPNGFESAYREVDGV KLHYVKGGQGPLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGYS GEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDAR IYRFPAFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHSSNTEVFSERL LDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTMTLAGGGHGGMGTFQ LEQMKAYADDVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRGR" misc_feature 3289817..3290665 /gene="cif" /locus_tag="PA2934" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene complement(3290694..3291173) /locus_tag="PA2935" /db_xref="GeneID:882655" CDS complement(3290694..3291173) /locus_tag="PA2935" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251625.1" /db_xref="GeneID:882655" /translation="MTLLHRNSAASRFFPKRKLLGGIIPGRDHCKLVFPSPRHSRHAG RAWGGARLTPKHYREIYSVVFPLTFCRQQADTDVIELDRFVSIVFEHFAVHFQGRQVH ILRLFRHDDSRGESMSSEHDGKDQDDLFSPLPYLLVSGAVVLMTLLLRCLFCPGEQF" gene 3291283..3291864 /locus_tag="PA2936" /db_xref="GeneID:882716" CDS 3291283..3291864 /locus_tag="PA2936" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251626.1" /db_xref="GeneID:882716" /translation="MTHPATVYSLSTRLLHWSMAFCFIGAIVLAYFVIWVLGHDHPQR LPVLNLHWVLGLLVGLLLVPRIVSRLRGPRLPAVPGTPLEHRLAHYAHLSLYALMLVM PLTGYVGTRLPTDFGLFVVPSFKDTALFAWISQTLNLSWEAFEKPFDAVHRVVGLWLS TSVVLLHALAAGYHQWVRRDGTLERMLGRRQRR" misc_feature 3291283..3291852 /locus_tag="PA2936" /note="Cytochrome b561 [Energy production and conversion]; Region: CybB; COG3038" /db_xref="CDD:442272" gene 3291960..3292268 /locus_tag="PA2937" /db_xref="GeneID:882717" CDS 3291960..3292268 /locus_tag="PA2937" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251627.1" /db_xref="GeneID:882717" /translation="MATTGVAQVAGSASDREEHAMASLHCQHRSYTITADVVEHPGIP TPWAGGCHITDPEGHTSKRIALPVRFAFLADLENAQRASIAHGKWLVDQRLDRGKALF " gene complement(3292324..3293781) /locus_tag="PA2938" /db_xref="GeneID:882791" CDS complement(3292324..3293781) /locus_tag="PA2938" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_251628.1" /db_xref="GeneID:882791" /translation="MAYGLQHVLTMYGGIVAVPLILGQAAGLAPGDIGLLIAASLFAG GLATLLQTLGVPFFGCQLPLVQGVSFAGVATMVAIIGSGGSGGIPAVLGAVMAASLIG LLITPIFSRITKFFPPLVTGIVITTIGLTLMPVAARWAMGGNSHAPDFGSMANIGLAA ITLVIVLLLSKLGSASISRLSILLAMVIGTVIAVFLGMADFSKVTEGPLVAFPTPFHF GMPTFQVAAIISMCIVIMVTLVETSADILAVGEIIDTKVDSRRLGNGLRADMFSSMLA PIFGSFTQSAFAQNVGLVAVTGIKSRYVVATGGLFLVILGLLPVMGRVIAAVPTAVLG GAGIVLFGTVAASGIRTLSKVDYRNNMNLIIVATSIGFGMIPIAAPTFYDHFPSWFAT IFHSGISSSAIMAILLNLAFNHFTAGNSDQQSVFVAASERTLRYQDIAALHEGDYFLD GKLYDAQGNEVPLAGDDSHGAPPRRRSETAEAGSA" misc_feature complement(3292543..3293772) /locus_tag="PA2938" /note="xanthine permease; Region: pbuX; TIGR03173" /db_xref="CDD:274468" protein_bind 3293938..3293953 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA2939" /bound_moiety="LasR" gene 3294282..3295892 /locus_tag="PA2939" /db_xref="GeneID:882792" CDS 3294282..3295892 /locus_tag="PA2939" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aminopeptidase" /protein_id="NP_251629.1" /db_xref="GeneID:882792" /translation="MSNKNNLRYALGALALSVSAASLAAPSEAQQFTEFWTPGKPNPS ICKSPLLVSTPLGLPRCLQASNVVKRLQKLEDIASLNDGNRAAATPGYQASVDYVKQT LQKAGYKVSVQPFPFTAYYPKGPGSLSATVPQPVTYEWEKDFTYLSQTEAGDVTAKVV PVDLSLGAGNTSTSGCEAEDFANFPAGSIALIQRGTCNFEQKAENAAAAGAAGVIIFN QGNTDDRKGLENVTVGESYEGGIPVIFATYDNGVAWSQTPDLQLHLVVDVVRKKTETY NVVAETRRGNPNNVVMVGAHLDSVFEGPGINDNGSGSAAQLEMAVLLAKALPVNKVRF AWWGAEEAGLVGSTHYVQNLAPEEKKKIKAYLNFDMIGSPNFGNFIYDGDGSDFGLQG PPGSAAIERLFEAYFRLRGQQSEGTEIDFRSDYAEFFNSGIAFGGLFTGAEGLKTEEQ AQKYGGTAGKAYDECYHSKCDGIANINQDALEIHSDAMAFVTSWLSLSTKVVDDEIAA AGQKAQSRSLQMQKSASQIERWGHDFIK" misc_feature 3294462..3295781 /locus_tag="PA2939" /note="M28 Zn-peptidase Streptomyces griseus aminopeptidase and similar proteins; Region: M28_SGAP_like; cd03876" /db_xref="CDD:349873" misc_feature 3294708..3295085 /locus_tag="PA2939" /note="Protease-associated (PA) domain. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At...; Region: PA; cd00538" /db_xref="CDD:238300" misc_feature 3294963..3294971 /locus_tag="PA2939" /note="PA/protease or protease-like domain interface [polypeptide binding]; other site" /db_xref="CDD:238300" misc_feature order(3295167..3295169,3295203..3295208,3295299..3295304, 3295386..3295391,3295536..3295538,3295545..3295550, 3295596..3295598,3295677..3295682) /locus_tag="PA2939" /note="active site" /db_xref="CDD:349873" gene complement(3295979..3297118) /locus_tag="PA2940" /db_xref="GeneID:882664" CDS complement(3295979..3297118) /locus_tag="PA2940" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA thiolase" /protein_id="NP_251630.1" /db_xref="GeneID:882664" /translation="MSPISVVIAGYARSPFHFARKGALVDIRPDDLAAAVLKGLVEKL DLDPALLEDVVMGCAYPEAEQGMNIARIASFRAGFPQSLGGATLNRFCGSSMSAVHYA AGQVLLGAGEAFIAAGVESMTRVPMGGFNLSPNPALLQDYPAVYMSMGQTAENVAERY AVSRVEQEEMAVRSHAKAVAAREAGLLREEIVAIDTPAGRVAEDGCIRPGTNLESLAQ LKPAFGGSVTAATSSPLTDGSAALLVCSEDFARRHGLVILARIKAVAVAGCAPEIMGM GPVQATRKVLQRAGLGIADIDLVEINEAFASQSIACIRELGLDMDRINLDGGALAIGH PLGATGARITGKAAALLRRTGGRYAIATQCIAGGQGVATLLEAVE" misc_feature complement(3295985..3297103) /locus_tag="PA2940" /note="Acetyl-CoA acetyltransferase [Lipid transport and metabolism]; Region: PaaJ; COG0183" /db_xref="CDD:439953" gene complement(3297240..3297884) /locus_tag="PA2941" /db_xref="GeneID:882665" CDS complement(3297240..3297884) /locus_tag="PA2941" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251631.1" /db_xref="GeneID:882665" /translation="MGADARSRPGALRGGLGGALSQGAEGAIQWLPTLLRGRPRQRRD LLRQPRSRRPGELWLVIVDASASTRRYGALAQAKGVLATLFEEAYRQRIRLAVLHATG QQAQWLWQGQKASRELQDWLRQLGAGGGTPLLDALHQAAGWLARRQRQKPAEHQRLLV LTDGRLRDWPALPEAACPSLLVDLESGPLRLGKAERLARELGAEYRHISELNEV" misc_feature complement(3297243..3297881) /locus_tag="PA2941" /note="vWFA (von Willebrand factor type A) domain of Mg and Co chelatases [Coenzyme transport and metabolism]; Region: ChlD; COG1240" /db_xref="CDD:440853" gene complement(3297905..3298921) /locus_tag="PA2942" /db_xref="GeneID:882833" CDS complement(3297905..3298921) /locus_tag="PA2942" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="magnesium chelatase" /protein_id="NP_251632.1" /db_xref="GeneID:882833" /translation="MSATVHYPLSAVVAADELKLALCLAAVDPAIGGVLIEGPRGMAK STLARGVAELLPAGEFVTLPLGASEERIVGSLDLDAALGEGRARFSPGVLAKADGGVL YVDEVNLLPDHLVDLLLDVAASGVNLVERDGISHRHPARFVLIGTMNPEEGELRPQLL DRFGLNVRLDTQPPPAERAEIIRRRLAFDADPQAFVERWEGQQDTLRRRCAEARRRLA RIPLDDAALDSIARRCFEAAVDGLRADLVWLRAARAHAAWRGGERIEAEDIDAVEHFA LLHRRRQSNPPPSAANPPPPPAAAPVALPERTGDGEGQWGELPARPVAMGTARELPRW PKKP" misc_feature complement(3298076..3298912) /locus_tag="PA2942" /note="Mg-chelatase subunit ChlI [Coenzyme transport and metabolism]; Region: ChlI; COG1239" /db_xref="CDD:440852" gene 3299022..3299269 /locus_tag="PA2942.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965621" ncRNA 3299022..3299269 /ncRNA_class="other" /locus_tag="PA2942.1" /product="P15" /db_xref="GeneID:6965621" gene 3299492..3300586 /locus_tag="PA2943" /db_xref="GeneID:882834" CDS 3299492..3300586 /locus_tag="PA2943" /EC_number="2.5.1.54" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phospho-2-dehydro-3-deoxyheptonate aldolase" /protein_id="NP_251633.1" /db_xref="GeneID:882834" /translation="MNSSVSALTTLSPNVQAVALPSATARTALERLPSPLELKARQPL PLELASQVAASRDAIRAILDGDDPRLLVVVGPCSIHDPRSALEYAERLAALSDELDGQ LLLVMRAYVEKPRTTVGWKGLAYDPHLDGSDDMAAGLALSRQLMLDMLRLGLPLATEL LQPLAAGYFDDLLSWAAIGARTSESQIHRELVSGLGLPVGFKNGTDGGVGIACDAIRS AAHGHRHFGLDPHGHPALIETRGNPDTHVVLRGGRHGSNYGPEQVQAVRQALESQGIA TRMMVDCSHANSGKNPLNQPGVLASVLDQRLAGASDLVGVMLESHLFDGCQALGGELR YGVSITDGCLGWEGTERILRDAARRLAERR" misc_feature 3299570..3300583 /locus_tag="PA2943" /note="phospho-2-dehydro-3-deoxyheptonate aldolase; Provisional; Region: PRK12755" /db_xref="CDD:237190" gene complement(3300615..3304361) /gene="cobN" /locus_tag="PA2944" /db_xref="GeneID:882831" CDS complement(3300615..3304361) /gene="cobN" /locus_tag="PA2944" /EC_number="6.6.1.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cobaltochelatase subunit CobN" /protein_id="NP_251634.1" /db_xref="GeneID:882831" /translation="MHLLRTQPGGFVPDDGIAHLAQTPAELVILCSGDSHLALLAEAA RALPDDYPSLRLANPMQLQNHASVDLYVEEVLRHARVILLSLHGGIGYWRYGVEQLVA LAERGALLIPVPGDDRPDPELSALGNLPAEQAERFWQYLRQGGLENAGQFYRCLASQC LGRDYAWREPQALPRVALFHPRHAEATLEHWRADWQAGRPVVALLFYRTHLQAANTAF IARFCERLAAQGLNPLPIALASLKESACLAQVEDWLERSDAALIVNTTGFAQSNPEAP ELRPFRRDVPVLQAICSLDNRPLWLDNPQGLGPRDLAMHVALPELDGRIVTRPISFKG LAWRSERSESDVVCYLADDERMDFVAELARRWAELARKPNAEKRVALVLANYPTRDGR IGNGVGLDTPAAALNILRALRQQGYPVDGLPASGTELIRQLLGGVSNDLEHLDLRPCA QSLALDDYLACFARLPERNRQAVLARWGEPQQDPMFRDGRMMVAGLRYGLTFVGIQPA RGYQLDPAAVYHDPDLVPPHGYLAFYFWLRHAYRADALLHVGKHGNLEWLPGKGVGLS AECWPDALLGPLPNIYPFIVNDPGEGAQAKRRTQAVIIDHLMPPLTRAESYGPLRDLE RLADEFYDASLLDPRRAEQLRGEILVLLRDNRLDREIGLQLSDDPDSWLPQLDAYLCD LKESQIRDGLHVFGESPSGRLRLDTLLALLRVPRGDGKGANAGLLKSLADDLGLGFDP LACDMGEAWQGARPACLEERGGEPWRTLGDTRERLELLALHWIERCLGGESPPATWRA SGEVLRGLCEQVAPTLDACGGAEIDGLLAALEGRFVPAGPSGAPSRGRLDVLPTGRNF FSVDVRNLPTPTAWRIGFQSANLLLERHLQEHGDHLRQLGLSVWGTATMRTGGDDIAQ ALALLGVRPVWQAGSQRVADFEILPVSLLDRPRVDVTLRVSGFFRDAFANLIRLFDAA VQAVAELDEAEELNPLAARVRLERQRLEAQGTAPAEARRQAGWRIFGAKPGAYGAGVQ GAIEERLWETRADLAEVYLNWGGYAYGAADDGTPARERFAQRLERLQAVLHNQDNREH DLLDSNDYYQFQGGMLAAVETLRGAPVASYHGDHSQPDNPRIRTLKEELNRVVRARAV NPKWIAGMKRHGYKGAFELAATVDYLCAFDATSELIDDHQYALLADAYLLDAETREFV RQHNPQALRDMAERLVEAQRRGLWQEPGAYREALENLLLDVEEE" misc_feature complement(3300618..3304361) /gene="cobN" /locus_tag="PA2944" /note="cobaltochelatase subunit CobN; Reviewed; Region: cobN; PRK05989" /db_xref="CDD:235663" gene complement(3304437..3305564) /locus_tag="PA2945" /db_xref="GeneID:882832" CDS complement(3304437..3305564) /locus_tag="PA2945" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis protein CobW" /protein_id="NP_251635.1" /db_xref="GeneID:882832" /translation="MANPLRGPCVRATRPHARRAEQGLPMKTLAKLPVTIVTGFLGAG KTTLLRHMLDNAEGRRIAVIVNEFGELGIDGEILKQCSIGCSEEEAQGRVFELANGCL CCTVQEEFFPVMRELVARRGDLDQILIETSGLALPKPLVQAFQWPEIRNACTVDAVIT VVDSPAVAAGTFAAHPEQVDQQRRQDPNLDHESPLHELFEDQLASADLVILNKADQLD AEALARVRAEIAGELPAAVKIVEASRGELPLPVLLGLNAEAELHIDGRPTHHDHEGHE DHDHDEFDSFHVDLPEVEEAALLEALGELVERHDILRIKGFAAIPGKPMRLLVQGVGK RFDRHFDRKWLADEARSTRLVVIGQELDQAAIANQLRTALA" misc_feature complement(3304455..3305480) /locus_tag="PA2945" /note="cobalamin biosynthesis protein CobW; Region: CobW; TIGR02475" /db_xref="CDD:274151" gene 3306312..3307013 /locus_tag="PA2946" /db_xref="GeneID:882835" CDS 3306312..3307013 /locus_tag="PA2946" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251636.2" /db_xref="GeneID:882835" /translation="MIKRIAQTAGFAGLLAALLLTLLQILWVTPLILEAETYEKSEPV AAQPHEHAPGVAAHVHDEEAWEPEDGWQRTLSTTGGNLVVAVGFALMLAGLFTLRAPG QTWQGLLWGLAGYAVFCLAPSLGLPPELPGTAAADLVQRQYWWIATAAATAVGLALLV FGGNWPLKLVGAVLLALPHLFGAPQPEVHASLAPEALAQRFVVASLVSNALFWAALGL AAAWLFRRNRGGVDA" misc_feature 3306381..3306938 /locus_tag="PA2946" /note="cobalt transporter subunit CbtA (proposed); Region: CbtA; TIGR02458" /db_xref="CDD:274142" gene 3307085..3307513 /locus_tag="PA2947" /db_xref="GeneID:882836" CDS 3307085..3307513 /locus_tag="PA2947" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251637.1" /db_xref="GeneID:882836" /translation="MPLPIPSLLIAGIGCRRGCSAEHLRALLERTLGEHGRSLAELDA LASIDGKRDEPGLRQLATLLERPVHFLAPAVLHDYEPRLLSPSAVALRETGCSSVAEA AALALAERLGGGRADLLGAKRSDDRASIALARLLTERELP" misc_feature 3307109..3307483 /locus_tag="PA2947" /note="Cobalamin synthesis G C-terminus; Region: CbiG_C; pfam01890" /db_xref="CDD:460374" gene 3307510..3308262 /gene="cobM" /locus_tag="PA2948" /db_xref="GeneID:882854" CDS 3307510..3308262 /gene="cobM" /locus_tag="PA2948" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="precorrin-4 C(11)-methyltransferase" /protein_id="NP_251638.1" /db_xref="GeneID:882854" /translation="MTVYFIGAGPGDPDLITVKGQRLIRQCPVILYAGSLVPQALLEG HQAGQVVNTAELDLEQIVELLAQAHRRGLDVARVHSGDPSLYGAIGEQIRHLRELGIP YEIVPGVTATAACAALLGCELTLPEVSQTLILTRYAARTKMPEGESLGDLARHRATLA IHLGVAHLAKIVEELLPHYGADCPVAVIHRASWPDQEQVRGTLGDILPKVAARNFRRT ALILVGEVLAAEGFADSSLYRAEHRHLYRPGE" misc_feature 3307510..3308259 /gene="cobM" /locus_tag="PA2948" /note="Precorrin-4 methylase [Coenzyme transport and metabolism]; Region: CobM; COG2875" /db_xref="CDD:442122" gene 3308391..3309338 /locus_tag="PA2949" /db_xref="GeneID:882855" CDS 3308391..3309338 /locus_tag="PA2949" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="lipase" /protein_id="NP_251639.1" /db_xref="GeneID:882855" /translation="MKRFLLGLVLLLAVAAGVLYFVPATLLASVRTVERGLAGLSEHS VQVDNLEIAYLEGGSEKNPTLLLIHGFGADKDNWLRFARPLTERYHVVALDLPGFGDS SKPQQASYDVGTQAERVANFAAAIGVRRLHLAGNSMGGHIAALYAARHPEQVLSLALI DNAGVMPARKSELFEDLERGENPLVVRQPEDFQKLLDFVFVQQPPLPAPLKRYLGERA VAASAFNAQIFEQLRQRYIPLEPELPKIEAPTLLLWGDRDRVLDVSSIEVMRPLLKRP SVVIMENCGHVPMVERPEETAQHYQAFLDGVRNAQVAGR" misc_feature 3308511..3309311 /locus_tag="PA2949" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene complement(3309411..3310607) /locus_tag="PA2950" /db_xref="GeneID:882931" CDS complement(3309411..3310607) /locus_tag="PA2950" /EC_number="1.3.1.-" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="reductase" /protein_id="NP_251640.1" /db_xref="GeneID:882931" /translation="MIIKPRVRGFICVTTHPAGCEANVKQQIDYVEAKGPVVNGPKKV LVIGSSTGYGLAARITAAFGSGADTLGVFFERPGSESKPGTAGWYNSAAFEKFAHEKG LYARSINGDAFSDEVKRLTIETIKRDLGKVDLVVYSLAAPRRTHPKSGEVFSSTLKPI GKSVSFRGLDTDKEVIKDVVLEAASDQEVADTVAVMGGEDWQMWIDALLEADVLADGA KTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLGIRDKLAPLGGDARVSVLKAVVTQ ASSAIPMMPLYLSLLFKVMKEQGTHEGCIEQVDGLYRESLYGAEPRLDEEGRLRADYK ELQPEVQSRVEELWDKVTNENLYELTDFAGYKSEFLNLFGFEVAGVDYEQDVNPDVQI ANLIQA" misc_feature complement(3309426..3310607) /locus_tag="PA2950" /note="Trans-2-enoyl-CoA reductase [Lipid transport and metabolism]; Region: COG3007" /db_xref="CDD:442244" gene complement(3310792..3311721) /gene="etfA" /locus_tag="PA2951" /db_xref="GeneID:882932" CDS complement(3310792..3311721) /gene="etfA" /locus_tag="PA2951" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="electron transfer flavoprotein subunit alpha" /protein_id="NP_251641.1" /db_xref="GeneID:882932" /translation="MAILVIAEHNNAALAAATLNTVAAAKAIGGDIHVLVAGQNVAAV AEAAAKVEGVSKVLVADNAAYAHQLPENVAPLIAELGKNYSHVLAPATTNGKNFLPRV AALLDVDQISEIVEVVSPDTFKRPIYAGNAIATVQSSAAVKVITVRTTGFDAVAAEGG SAAVEQVSGPADAGKSAFVGEELAKSDRPELTAAKIVVSGGRGMQNGDNFKILYALAD KLGAAVGASRAAVDAGFVPNDMQVGQTGKIVAPQLYIAVGISGAIQHLAGMKDSKVIV AINKDEEAPIFQVADYGLVADLFDAVPELEKAV" misc_feature complement(3310795..3311715) /gene="etfA" /locus_tag="PA2951" /note="Electron transfer flavoprotein, alpha subunit FixB [Energy production and conversion]; Region: FixB; COG2025" /db_xref="CDD:441628" gene complement(3311721..3312470) /gene="etfB" /locus_tag="PA2952" /db_xref="GeneID:880158" CDS complement(3311721..3312470) /gene="etfB" /locus_tag="PA2952" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="electron transfer flavoprotein subunit beta" /protein_id="NP_251642.1" /db_xref="GeneID:880158" /translation="MKVLVAVKRVVDYNVKVRVKADNSGVDLANVKMSMNPFCEIAVE EAVRLKEKGVATEIVAVSVGPTAAQEQLRTALALGADRAILVESNDELNSLAVAKLLK AVVDKEQPQLVILGKQAIDSDNNQTGQMLAALTGYAQGTFASKVEVAGDKVNVTREID GGLQTVALNLPAIVTTDLRLNEPRYASLPNIMKAKKKPLDVVTPDALGVSTASTVKTL KVEAPAARSAGIKVKSVAELVEKLKNEAKVI" misc_feature complement(3311727..3312470) /gene="etfB" /locus_tag="PA2952" /note="Electron transfer flavoprotein, alpha and beta subunits [Energy production and conversion]; Region: FixA; COG2086" /db_xref="CDD:441689" gene 3312791..3314446 /locus_tag="PA2953" /db_xref="GeneID:880159" CDS 3312791..3314446 /locus_tag="PA2953" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="electron transfer flavoprotein-ubiquinone oxidoreductase" /protein_id="NP_251643.1" /db_xref="GeneID:880159" /translation="MEREYMEFDVVIVGAGPAGLSAACRLKQKAAEAGQEISVCVVEK GSEVGAHILSGAVFEPRALNELFPDWKELGAPLNTPVTGDDIYVLKSAESATKVPNFF VPKTMHNEGNYIISLGNLCRWLAQQAEGLGVEIYPGFAAQEALIDENGVVRGIVTGDL GVDREGNPKEGYYTPGMELRAKYTLFAEGCRGHIGKQLIKKYNLDSEADAQHYGIGIK EIWDIDPSKHKPGLVVHTAGWPLNDENTGGSFLYHLENNQVFVGLIIDLSYSNPHLSP FDEFQRYKHHPVVKQYLEGGKRVAYGARAICKGGLNSLPKMVFPGGALIGCDLGTLNF AKIKGSHTAMKSGMLAADAIAEALAAGREGGDELSSYVDAFKASWLYDELFRSRNFGA AIHKFGAIGGGAFNFIDQNIFGGKIPVTLHDDKPDYACLKKASEAPKIDYPKPDGKLS FDKLSSVFLSNTNHEEDQPIHLKLADASIPIEKNLPLYDEPAQRYCPAGVYEVVANDD GSKRFQINAQNCVHCKTCDIKDPAQNITWVAPEGTGGPNYPNM" misc_feature 3312833..3313921 /locus_tag="PA2953" /note="Dehydrogenase (flavoprotein) [Energy production and conversion]; Region: FixC; COG0644" /db_xref="CDD:440409" misc_feature 3314129..3314437 /locus_tag="PA2953" /note="Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Region: ETF_QO; pfam05187" /db_xref="CDD:461576" gene complement(3314495..3315064) /locus_tag="PA2954" /db_xref="GeneID:878766" CDS complement(3314495..3315064) /locus_tag="PA2954" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251644.1" /db_xref="GeneID:878766" /translation="MSDTGKANDLLAQIPRGEKKGLPPVHLWNPPFCGDIDMRIARDG TWFYLGTPIGRKPMVKLFSSIIRRDGDDYFLVTPVEKVGIRVDDAPFVAVTLQVQGEG GAQVLRFATNVEDEVEADAGHPLRVEIDPRSQEPTPYLRVRDNLEALVHRNVFYQLVE LAVPRRIDGIEWLGVWSHGEFFPLGPQPD" misc_feature complement(3314513..3315064) /locus_tag="PA2954" /note="Uncharacterized conserved protein, DUF1285 family [Function unknown]; Region: COG3816" /db_xref="CDD:443028" gene complement(3315057..3315689) /locus_tag="PA2955" /db_xref="GeneID:878767" CDS complement(3315057..3315689) /locus_tag="PA2955" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251645.1" /db_xref="GeneID:878767" /translation="MLHLFRIALAMLLLGSLSACMKPSDLADGADYYLRDAGVLDHSA SQRSNNRRIQADSFIYIGQGPFVPPGYRYARPNVVAEQAFEGFVEYFPLVRRAKAPLG LDDAMREARAAGAHYLLYCRFARGDNRIGNWEEWEDEEELGRVGRDRSVIQVMLIETS TRFLVDSATIRSRGGFLTFYDATPEDLLRPPLEQYAQELLGLNSRGTGYE" misc_feature complement(3315093..3315539) /locus_tag="PA2955" /note="Domain of unknown function (DUF4823); Region: DUF4823; pfam16105" /db_xref="CDD:435138" gene complement(3315754..3316650) /locus_tag="PA2956" /db_xref="GeneID:880199" CDS complement(3315754..3316650) /locus_tag="PA2956" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251646.1" /db_xref="GeneID:880199" /translation="MSVREFPIHYIEPVFRPPSEAHSLILPVTNGCSWNKCGFCEMYT QPQKKFRARDENEVLEEIRRCGERLIVKRVFLADGDALVLPTRRLLAVLQAIREHLPE VERVSSYCLPRNLRRKSVDELRELADAGLRMAYVGAESGDDEVLARVNKGETYSSTLD ALEKLGEAGISRSVMILNGLGGMTLSAQHADNSARLMNAAQPEYLSTLVVSFPTGEQR FRAGFADFEALDRRALFVEVERLLQGLELEDTVFRSDHASNYLVLKGELGADKARLLA EVRQAIEQPQHAALRQEWQRGL" misc_feature complement(3316033..3316587) /locus_tag="PA2956" /note="Elongator protein 3, MiaB family, Radical SAM; Region: Elp3; smart00729" /db_xref="CDD:214792" gene complement(3316800..3317438) /locus_tag="PA2957" /db_xref="GeneID:880200" CDS complement(3316800..3317438) /locus_tag="PA2957" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251647.1" /db_xref="GeneID:880200" /translation="MQKEPRKVREFRRREQEILDTALKLFLEQGEDSVTVEMIADAVG IGKGTIYKHFKSKAEIYLRLMLDYERDLAALFHSEDVARDKEALSRAYFEFRMRDPQR YRLFDRLEEKVVKTSQVPEMVEELHKIRASNFERLTQLIKERIADGKLENVPPYFHYC AAWALVHGAVALYHSPFWREVLEDQEGFFHFLMDIGVRMGNKRKREGDAPSA" misc_feature complement(3316935..3317414) /locus_tag="PA2957" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene 3317524..3318657 /locus_tag="PA2958" /db_xref="GeneID:879115" CDS 3317524..3318657 /locus_tag="PA2958" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251648.1" /db_xref="GeneID:879115" /translation="MNCYQDEFDQTNGLRYLNHAAVAPWPRRAADAVSAFARENVAHG ASDYPEWLKIEHRLRERLARLLNARAGSDLALVKNTSEALSFVAFGLDWREGDQVVIG NEEFPSNRVVWEALRPRGVEVVEVGLAGDDPESALLAACGPRTRLLSISAVQYASGLR LDLERIGAGCRRRGVLFCIDAIQQLGALPFDVQAYDCAFAMADGYKWMLGPEGLGVFY CHPEQRERLALHEYGWHMLEHALDYERRDWRPARSARRFECGSPNMLGAMALEASLGL LEEVGMERVGRDIAERVQWLQDGLSGIPGVRLHSPRNPSRRAGILTFSLDGQDNRTLF ETLRQERVICAQRGGGIRFSPHFYTSSTVIDDTLAILRQVAGT" misc_feature 3317569..3318648 /locus_tag="PA2958" /note="Selenocysteine lyase/Cysteine desulfurase [Amino acid transport and metabolism]; Region: CsdA; COG0520" /db_xref="CDD:440286" gene 3318663..3318859 /gene="rgsA" /locus_tag="PA2958.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /db_xref="GeneID:6965620" ncRNA 3318663..3318859 /ncRNA_class="other" /gene="rgsA" /locus_tag="PA2958.1" /product="RgsA" /db_xref="GeneID:6965620" gene complement(3318883..3319659) /locus_tag="PA2959" /db_xref="GeneID:879116" CDS complement(3318883..3319659) /locus_tag="PA2959" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251649.1" /db_xref="GeneID:879116" /translation="MLVDSHCHLDRLDLAAHGGSLDAALDAARARGVGQFLCIGVSAD NAQAVKALAERYADVHCSVGVHPLDLEPGSAPALDWLLGELAHPRVVAIGETGLDYHY EPEAAELQQEAFRLHLEAARITAKPVIVHTREARADTLALLREAALPQAGVLHCFTED WEMARSALDLGFYISLSGIVTFRNADALREVARQVPADRLLVETDSPYLAPIPHRGKP NLPEYVRDVAEFLATLRGVSLETLAEQTTANFHRLFPLAR" misc_feature complement(3318892..3319656) /locus_tag="PA2959" /note="3'->5' ssDNA/RNA exonuclease TatD [Cell motility]; Region: TatD; COG0084" /db_xref="CDD:439854" gene complement(3319674..3320030) /gene="pilZ" /locus_tag="PA2960" /db_xref="GeneID:880378" CDS complement(3319674..3320030) /gene="pilZ" /locus_tag="PA2960" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein PilZ" /protein_id="NP_251650.1" /db_xref="GeneID:880378" /translation="MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKN YKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQGNRAAGIGVQFNDGDNTARNKIE TYLAGALKSDRPTHTM" misc_feature complement(3319677..3320030) /gene="pilZ" /locus_tag="PA2960" /note="Type IV pilus assembly protein PilZ [Cell motility, Extracellular structures]; Region: PilZ; COG3215" /db_xref="CDD:442448" gene complement(3320064..3321050) /gene="holB" /locus_tag="PA2961" /db_xref="GeneID:880379" CDS complement(3320064..3321050) /gene="holB" /locus_tag="PA2961" /EC_number="2.7.7.7" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit delta'" /protein_id="NP_251651.1" /db_xref="GeneID:880379" /translation="MADIYPWQQALWSQLGGRAQHAHAYLLYGPAGIGKRALAEHWAA QLLCQRPAAAGACGECKACQLLAAGTHPDYFVLEPEEAEKPIRVDQVRDLVGFVVQTA QLGGRKVVLLEPAEAMNVNAANALLKSLEEPSGDTVLLLISHQPSRLLPTIKSRCVQQ ACPLPGAAASLEWLARALPDEPAEALEELLALSGGSPLTAQRLHGQGVREQRAQVVEG VKKLLKQQIAASPLAESWNSVPLPLLFDWFCDWTLGILRYQLTHDEEGLGLADMRKVI QYLGDKSGQAKVLAMQDWLLQQRQKVLNKANLNRVLLLEALLVQWASLPGPG" misc_feature complement(3320067..3321050) /gene="holB" /locus_tag="PA2961" /note="DNA polymerase III subunit delta'; Validated; Region: PRK05707" /db_xref="CDD:180215" gene complement(3321043..3321675) /gene="tmk" /locus_tag="PA2962" /db_xref="GeneID:878730" CDS complement(3321043..3321675) /gene="tmk" /locus_tag="PA2962" /EC_number="2.7.4.9" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="thymidylate kinase" /protein_id="NP_251652.1" /db_xref="GeneID:878730" /translation="MTGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTP LAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATY AYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIGLARAAARGRLDRFEQEDR RFFEAVRQTYLQRAAQAPERYQVLDAGLPLAEVQAGLDRLLPNLLERLNG" misc_feature complement(3321058..3321675) /gene="tmk" /locus_tag="PA2962" /note="Thymidylate kinase [Nucleotide transport and metabolism]; Region: Tmk; COG0125" /db_xref="CDD:439895" gene complement(3321704..3322753) /locus_tag="PA2963" /db_xref="GeneID:880487" CDS complement(3321704..3322753) /locus_tag="PA2963" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251653.1" /db_xref="GeneID:880487" /translation="MRKLLVLLESGLLFVGLCVGLAAWQQQRALEQPLQLTEERLLDV SSGSTPGGMLARLEQEKVLHGAFWLRLYWRFNLPGQALHSGEYRLLPGMKGADLLELW REGEVVQYSLTLVEGWSFRQVREALARQGKLEQTLAGLSDGEIMQRLGKPDEVAEGRF FPDTYRYTRGMRDIDILRKAYQRMQTILAKEWDGRSQDLPYRDAYQALIMASLVEKET GVPEERSQIAGVFVRRLQRGMLLQTDPTVIYGMGERYNGKITRADLREPTPYNTYVVP GMPPTPIALAGREAIRAALHPAEGETLYFVARGDGSHVFSSSLDEHNKAVREYQLKRR SDYRSSPAPITPPPQ" misc_feature complement(3321746..3322714) /locus_tag="PA2963" /note="Endolytic transglycosylase MltG, terminates peptidoglycan polymerization [Cell wall/membrane/envelope biogenesis]; Region: MltG; COG1559" /db_xref="CDD:441167" gene complement(3322759..3323574) /gene="pabC" /locus_tag="PA2964" /db_xref="GeneID:880488" CDS complement(3322759..3323574) /gene="pabC" /locus_tag="PA2964" /EC_number="4.1.3.38" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="4-amino-4-deoxychorismate lyase" /protein_id="NP_251654.1" /db_xref="GeneID:880488" /translation="MLDWVDGRPAAELSVRDRGLAYGDGLFETLAVRAGTPRLLERHL ARLEEGCRRLAIPLDTAALRQELLAFCAALGDGVAKLIVTRGEGLRGYAPPAEASPRR ILSGSPRPAYPERHWQQGVRLFACRTRLAEQPLLAGLKHLNRLEQVLARAEWSDAGHA EGLMLDVHERVVEGVFSNLLLVLDGTLVAPDLRRCGVAGVMRAELLERAEGIGVPLAI RDVSMAELATADEVFLCNSQFGIWPVRALDEHVWPVGELTRKLQDQLRDDLDF" misc_feature complement(3322774..3323565) /gene="pabC" /locus_tag="PA2964" /note="4-amino-4-deoxychorismate lyase; Reviewed; Region: PRK06092" /db_xref="CDD:235696" misc_feature complement(order(3323056..3323058,3323155..3323157, 3323437..3323439)) /gene="pabC" /locus_tag="PA2964" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:238800" misc_feature complement(3323155..3323157) /gene="pabC" /locus_tag="PA2964" /note="catalytic residue [active]" /db_xref="CDD:238800" gene complement(3323574..3324818) /gene="fabF1" /locus_tag="PA2965" /db_xref="GeneID:879894" CDS complement(3323574..3324818) /gene="fabF1" /locus_tag="PA2965" /EC_number="2.3.1.179" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-oxoacyl-ACP synthase" /protein_id="NP_251655.1" /db_xref="GeneID:879894" /translation="MSRRRVVITGMGMLSPLGLDVPSSWEGILAGRSGIAPIEHMDLS AYSTRFGGSVKGFNVEEYLSAKEARKLDLFIQYGLAASFQAVRDSGLEVTDANRERIG VSMGSGIGGLTNIENNCRSLFEQGPRRISPFFVPGSIINMVSGFLSIHLGLQGPNYAL TTACTTGTHSIGMAARNIAYGEADVMVAGGSEMAACGLGLGGFGAARALSTRNDEPTR ASRPWDRDRDGFVLSDGSGALVLEELEHARARGARIYAELVGFGMSGDAFHMTAPPED GAGAARCMKNALRDAGLDPRQVDYINAHGTSTPAGDIAEIAAVKSVFGEHAHALSMSS TKSMTGHLLGAAGAVEAIFSVLALRDQVAPPTINLDNPDEGCDLDLVAHEAKPRKIDV ALSNSFGFGGTNGTLVFRRFAD" misc_feature complement(3323580..3324812) /gene="fabF1" /locus_tag="PA2965" /note="beta-ketoacyl-ACP synthase II; Region: PRK07314" /db_xref="CDD:235987" misc_feature complement(order(3323610..3323612,3323616..3323618, 3323973..3323975,3324015..3324029,3324201..3324206, 3324213..3324218,3324279..3324281,3324288..3324293, 3324300..3324302,3324336..3324344,3324348..3324350, 3324354..3324356,3324372..3324374,3324384..3324386, 3324396..3324398,3324414..3324416,3324450..3324455, 3324459..3324461,3324471..3324476,3324495..3324497)) /gene="fabF1" /locus_tag="PA2965" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238430" misc_feature complement(order(3323796..3323798,3323907..3323909, 3324327..3324329)) /gene="fabF1" /locus_tag="PA2965" /note="active site" /db_xref="CDD:238430" gene complement(3324947..3325183) /gene="acpP" /locus_tag="PA2966" /db_xref="GeneID:879895" CDS complement(3324947..3325183) /gene="acpP" /locus_tag="PA2966" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="acyl carrier protein" /protein_id="NP_251656.1" /db_xref="GeneID:879895" /translation="MSTIEERVKKIVAEQLGVKEEEVTNSASFVEDLGADSLDTVELV MALEEEFETEIPDEKAEKITTVQEAIDYIVAHQQ" misc_feature complement(3324953..3325183) /gene="acpP" /locus_tag="PA2966" /note="acyl carrier protein; Provisional; Region: acpP; PRK00982" /db_xref="CDD:179197" gene complement(3325379..3326122) /gene="fabG" /locus_tag="PA2967" /db_xref="GeneID:880433" CDS complement(3325379..3326122) /gene="fabG" /locus_tag="PA2967" /EC_number="1.1.1.100" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-oxoacyl-[acyl-carrier-protein] reductase FabG" /protein_id="NP_251657.1" /db_xref="GeneID:880433" /translation="MSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEK IAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMK DDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAG LEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEI AKVVGFLASDGAAYVTGATVPVNGGMYMS" misc_feature complement(3325388..3326101) /gene="fabG" /locus_tag="PA2967" /note="3-oxoacyl-(acyl-carrier-protein) reductase; Region: 3oxo_ACP_reduc; TIGR01830" /db_xref="CDD:273824" misc_feature complement(order(3325550..3325558,3325562..3325564, 3325568..3325573,3325649..3325651,3325661..3325663, 3325700..3325708,3325787..3325789,3325847..3325858, 3325934..3325942,3326012..3326017,3326072..3326083, 3326087..3326089)) /gene="fabG" /locus_tag="PA2967" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187594" misc_feature complement(order(3325388..3325390,3325394..3325432, 3325439..3325441,3325451..3325456,3325460..3325465, 3325472..3325474,3325481..3325492,3325496..3325504, 3325565..3325567,3325601..3325606,3325610..3325627, 3325631..3325636,3325643..3325648,3325655..3325660, 3325667..3325690,3325736..3325738,3325745..3325750, 3325757..3325762,3325766..3325771,3325778..3325783, 3325793..3325795,3325802..3325807,3325814..3325822, 3325826..3325837,3325913..3325915,3326039..3326041, 3326051..3326053)) /gene="fabG" /locus_tag="PA2967" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:187594" misc_feature complement(order(3325610..3325615,3325619..3325627, 3325631..3325636,3325643..3325648,3325655..3325660, 3325667..3325693,3325736..3325738,3325745..3325750, 3325757..3325759,3325766..3325771,3325778..3325783, 3325793..3325795,3325802..3325807,3325814..3325816, 3325820..3325822,3325826..3325834)) /gene="fabG" /locus_tag="PA2967" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187594" misc_feature complement(order(3325649..3325651,3325661..3325663, 3325700..3325702,3325784..3325786)) /gene="fabG" /locus_tag="PA2967" /note="active site" /db_xref="CDD:187594" gene complement(3326145..3327083) /gene="fabD" /locus_tag="PA2968" /db_xref="GeneID:880434" CDS complement(3326145..3327083) /gene="fabD" /locus_tag="PA2968" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="malonyl CoA-ACP transacylase" /protein_id="NP_251658.1" /db_xref="GeneID:880434" /translation="MSASLAFVFPGQGSQSLGMLAELGAQQALVRDTFAEASEALGYD LWALVQNGPEERLNQTDKTQPAILTVSIALWRLWLAEGGARPAFVAGHSLGEYSALVA AESLAFADAVKLVERRGQLMQQAVPAGQGGMAAILGLEDADVLAACAEAAQGEVVSAV NFNAPGQVVIAGAAAAVERAIEACKARGAKRAVALPVSVPSHCELMRPAAEQFAASVE SLQWQAPKISLVQNVSAAVPADLDTLRRDLLAQLYSPVRWVESIQLLAEKGVTELVEC GPGKVLAGLNRRCAKGINTHGLDGVEAFAATRAALA" misc_feature complement(3326178..3327077) /gene="fabD" /locus_tag="PA2968" /note="Malonyl CoA-acyl carrier protein transacylase [Lipid transport and metabolism]; Region: FabD; COG0331" /db_xref="CDD:440100" gene complement(3327189..3328169) /gene="plsX" /locus_tag="PA2969" /db_xref="GeneID:880143" CDS complement(3327189..3328169) /gene="plsX" /locus_tag="PA2969" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphate acyltransferase" /protein_id="NP_251659.1" /db_xref="GeneID:880143" /translation="MGGDFGPHCVVPASIAFLAENSSSQLILVGQPALLEELLSRYPS LDRQRLRVHAASEVIGSDERPSQALRGKPDASMRVALELVRDGRAHACVSAGNTGALM ALSRHLLKTLPGIDRPAMVTAVPTEKGHCHLLDLGANVDCSAEHLYQFAVMGAVAAEA LGCVSPRVALLNVGTEEIKGNQQVKLAASLLQKAQGLNFSGYIEGDGLYRGEADVVVC DGFVGNILLKASEGLAAMVSARIEQRFRDGLAAKLVGALALPLLRRLRGDIAPARYNG ASFLGLQGIVVKSHGSAAEEGFQSALRRAALEVRENLPQRLHGRLEHLLL" misc_feature complement(3327198..3328169) /gene="plsX" /locus_tag="PA2969" /note="Acyl-ACP:phosphate acyltransferase (fatty acid/phospholipid biosynthesis) [Lipid transport and metabolism]; Region: PlsX; COG0416" /db_xref="CDD:440185" gene complement(3328203..3328385) /gene="rpmF" /locus_tag="PA2970" /db_xref="GeneID:880144" CDS complement(3328203..3328385) /gene="rpmF" /locus_tag="PA2970" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L32" /protein_id="NP_251660.1" /db_xref="GeneID:880144" /translation="MAVQQNKKSRSARDMRRSHDALESNALSVEKSTGEVHLRHHVSP DGFYRGRKVVDKGSDE" misc_feature complement(3328218..3328382) /gene="rpmF" /locus_tag="PA2970" /note="Ribosomal protein L32 [Translation, ribosomal structure and biogenesis]; Region: RpmF; COG0333" /db_xref="CDD:440102" gene complement(3328399..3328935) /locus_tag="PA2971" /db_xref="GeneID:879798" CDS complement(3328399..3328935) /locus_tag="PA2971" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251661.1" /db_xref="GeneID:879798" /translation="MLNGPIPPHIDPRKLVDRGATLEGVYALADMPRVCEQLTSDAGE VRVKVSFERDHQKLAVMHMQLDTEVSMVCQRCLDAAAIPVHGEYTYAILREGQSADGL PKGYDALEVGEEPLDLLALVEDELLLALPIVPAHDPEVCQHPAGFVVEDEPESSEVED KRPNPFSVLAQLKRDPNV" misc_feature complement(3328414..3328920) /locus_tag="PA2971" /note="Large ribosomal RNA subunit accumulation protein YceD; Region: YceD; cl00616" /db_xref="CDD:469845" gene 3329045..3329623 /locus_tag="PA2972" /db_xref="GeneID:879799" CDS 3329045..3329623 /locus_tag="PA2972" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251662.1" /db_xref="GeneID:879799" /translation="MPDLILASSSPYRRELLTRLRLPFESASPDIDESHRAGESAEEL VRRLSASKAEALAGRYPQHLVIGSDQVAVLDGNILGKPHTPERAIQQLRDASGKSVTF LTGLALLNSASRRIQVACVPFTVHFRHLDESRIRRYVEAERPLDCAGSFKAEGLGVSL FRSTEGEDATSLVGLPLIRLVDMLLEEGVEIP" misc_feature 3329048..3329620 /locus_tag="PA2972" /note="7-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamily [Secondary metabolites biosynthesis, transport and catabolism]; Region: Maf; COG0424" /db_xref="CDD:440193" gene complement(3329690..3330670) /locus_tag="PA2973" /db_xref="GeneID:879106" CDS complement(3329690..3330670) /locus_tag="PA2973" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="peptidase" /protein_id="NP_251663.1" /db_xref="GeneID:879106" /translation="MSDEWKSETPKANDDKSWKLLEKAVLAGVQEQRRARRWGIFFKS LTFIYLFVVLLAFSPFGSLEKSASRSGSHTALIEVKGMIADDEPASADNIVTALRAAF KDEGTKGIVLRINSPGGSPVQSGYIYDEIRRLRGEHPNVKVYAVISDLGASGAYYIAS AADQIYADKASLVGSIGVTAASFGFVGTMEKLGVERRVYTSGEHKSFLDPFQPQKPEE TQFWQQVLDTTHKQFIDSVKKGRGDRLKVEGHPELFSGLVWSGEQALQLGLIDGLGNA SYVAREVVKEKKIEDYTVQESPFDRFAKKFGASVAERLALWMGWQGPVLR" misc_feature complement(3329846..3330478) /locus_tag="PA2973" /note="Periplasmic serine protease, ClpP class [Posttranslational modification, protein turnover, chaperones]; Region: SppA; COG0616" /db_xref="CDD:440381" gene complement(3330663..3331355) /locus_tag="PA2974" /db_xref="GeneID:879107" CDS complement(3330663..3331355) /locus_tag="PA2974" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_251664.1" /db_xref="GeneID:879107" /translation="MTDYALLVFDWDGTLVDSIARIVDSMKAAARETALPERGDTRIK GIIGLGLPEAIASLYPEVGDPALVERFRCAYSEHYLAQEAQPSRLFPGVAEAMVHFRE AGFRLAVATGKSRRGLDRVLAGHGWSDFFDITRCADETASKPDPLMLHEILAHCRVEP GRALMIGDSPFDLEMARRAGMDSVAVAYGAQSLEQLRPYAPRLEVEHFTELRAWLGGA RREAVSGVVEHV" misc_feature complement(3330723..3331340) /locus_tag="PA2974" /note="The haloacid dehalogenase (HAD) superfamily includes carbon and phosphorus hydrolases such as 2-haloalkonoate dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, among others. These...; Region: Haloacid Dehalogenase-like Hydrolases; cl21460" /db_xref="CDD:473868" misc_feature complement(order(3330840..3330845,3330852..3330857, 3330927..3330929,3331020..3331025,3331314..3331328)) /locus_tag="PA2974" /note="active site" /db_xref="CDD:319835" gene complement(3331348..3332304) /gene="rluC" /locus_tag="PA2975" /db_xref="GeneID:880474" CDS complement(3331348..3332304) /gene="rluC" /locus_tag="PA2975" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribosomal large subunit pseudouridine synthase C" /protein_id="NP_251665.1" /db_xref="GeneID:880474" /translation="MTTPASPTTGVQLLDVPPELAGQRIDNFLIARLKGAPKTLIYRI LRKGEVRVNKGRIKPDYRLQAGDQVRVPPLRLAERDEPAPLAQGLLERMEAAIVYEDK ALIVVNKPAGIAVHGGSGVSAGVIEVFRQLRPDAKDIELVHRLDRDTSGLLMIAKKRS MLRHLHEALRGEKIVDKRYHALVRGHWPAGKKNVRAPLLKNNLRSGERMVEVNVEGKD ALTEFRVLRRFGDFATLVEARPITGRTHQIRVHAKHAGHAIAGDPKYGDEDFSREIRE LGGKRLFLHAAQLRVPLPDGQVLELEAPVDEMWQRSLERLND" misc_feature complement(3331351..3332283) /gene="rluC" /locus_tag="PA2975" /note="23S rRNA pseudouridine(955/2504/2580) synthase RluC; Region: PRK11025" /db_xref="CDD:182909" gene 3332881..3336054 /gene="rne" /locus_tag="PA2976" /db_xref="GeneID:880516" CDS 3332881..3336054 /gene="rne" /locus_tag="PA2976" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribonuclease E" /protein_id="NP_251666.1" /db_xref="GeneID:880516" /translation="MKRMLINATQPEELRVALVDGQRLFDLDIESGAREQKKANIYKG RITRVEPSLEAAFVDFGAERHGFLPLKEISREYFKKSPEGRINIKEVLSEGQEVIVQV EKEERGNKGAALTTFISLAGRYLVLMPNNPRAGGISRRIEGEERNELREALNGLNAPA DMGLIVRTAGLGRSTEELQWDLDYLLQLWSAIKEASGERGAPFLIYQESNVIIRAIRD YLRQDIGEVLIDSIDAQEEALNFIRQVMPQYASKVKLYQDSVPLFNRFQIESQIETAF QREVKLPSGGSIVIDPTEALVSIDINSARATKGGDIEETALQTNLEAAEEIARQLRLR DIGGLIVIDFIDMTPAKNQRAVEERVREALEADRARVQVGRISRFGLLEMSRQRLRPS LGETSGIVCPRCNGQGIIRDVESLSLAILRLIEEEALKDRTAEVRARVPFQVAAFLLN EKRNAITKIELRTRARIFILPDDHLETPHFEVQRLRDDSPELVAGQTSYEMATVEHEE AQPVSSTRTLVRQEAAVKTVAPQQPAPQHTEAPVEPAKPMPEPSLFQGLVKSLVGLFA GKDQPAAKPAETSKPAAERQTRQDERRNGRQQNRRRDGRDGNRRDEERKPREERAERQ PREERAERPNREERSERRREERAERPAREERQPREGREERAERTPREERQPREGREGR EERSERRREERAERPAREERQPREGREERAERPAREERQPREDRQARDAAALEAEALP NDESLEQDEQDDTDGERPRRRSRGQRRRSNRRERQREVSGELEGSEATDNAAAPLNTV AAAAAAGIAVASEAVEANVEQAPATTSEAASETTASDETDASTSEAVETQGADSEANT GETADIEAPVTVSVVRDEADQSTLLVAQATEEAPFASESVESREDAESAVQPATEAAE EVAAPVPVEVAAPSEPAATEEPTPAIAAVPANATGRALNDPREKRRLQREAERLAREA AAAAEAAAQAAPAVEEIPAVASEEASAQEEPAAPQAEEITQADVPSQADEAQEAVQAE PEASGEGAADTEHAKKTEESETSRPHA" misc_feature 3332884..3334344 /gene="rne" /locus_tag="PA2976" /note="Ribonuclease G or E [Translation, ribosomal structure and biogenesis]; Region: CafA; COG1530" /db_xref="CDD:441139" misc_feature <3334399..>3334638 /gene="rne" /locus_tag="PA2976" /note="cell division protein FtsN; Region: PRK10927" /db_xref="CDD:236797" misc_feature <3335422..>3335982 /gene="rne" /locus_tag="PA2976" /note="DNA polymerase III subunit gamma/tau; Region: PRK12323; cl46901" /db_xref="CDD:481241" gene complement(3336212..3337231) /gene="murB" /locus_tag="PA2977" /db_xref="GeneID:880517" CDS complement(3336212..3337231) /gene="murB" /locus_tag="PA2977" /EC_number="1.3.1.98" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="UDP-N-acetylenolpyruvoylglucosamine reductase" /protein_id="NP_251667.1" /db_xref="GeneID:880517" /translation="MSLELQEHCSLKPYNTFGIDVRARLLAHARDEADVREALALARE RGLPLLVIGGGSNLLLTRDVEALVLRMASQGRRIVSDAADSVLVEAEAGEAWDPFVQW SLERGLAGLENLSLIPGTVGAAPMQNIGAYGVELKDVFDSLTALDRQDGTLREFDRQA CRFGYRDSLFKQEPDRWLILRVRLRLTRRERLHLDYGPVRQRLEEEGIASPTARDVSR VICAIRREKLPDPAVLGNAGSFFKNPLVDATQAERLRQAFPDLVGYPQADGRLKLAAG WLIDKGGWKGFRDGPVGVHAQQALVLVNHGGATGAQVRALAERIQEDVRRRFGVELEP EPNLY" misc_feature complement(3336215..3337225) /gene="murB" /locus_tag="PA2977" /note="UDP-N-acetylmuramate dehydrogenase; Region: murB; PRK00046" /db_xref="CDD:234593" gene complement(3337228..3337692) /gene="ptpA" /locus_tag="PA2978" /db_xref="GeneID:880168" CDS complement(3337228..3337692) /gene="ptpA" /locus_tag="PA2978" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphotyrosine protein phosphatase" /protein_id="NP_251668.1" /db_xref="GeneID:880168" /translation="MRVLFVCLGNICRSPTAEGVFRRKVEEAGLASRIHVDSAGTAGW HVGKAPDQRTRLAAQRRGYDLSALRGRQVGIEDFSRHDLILAMDLSNLADLETLRAGR GAAELDLFLRRYGSERDEVPDPYYGGEEGFEQVLDLIEHACDRLLIEAKGRL" misc_feature complement(3337252..3337692) /gene="ptpA" /locus_tag="PA2978" /note="Low molecular weight protein tyrosine phosphatase; Region: LMWPTP; cd16343" /db_xref="CDD:319971" misc_feature complement(order(3337318..3337320,3337324..3337326, 3337558..3337560,3337651..3337674)) /gene="ptpA" /locus_tag="PA2978" /note="active site" /db_xref="CDD:319971" gene complement(3337692..3338456) /gene="kdsB" /locus_tag="PA2979" /db_xref="GeneID:880169" CDS complement(3337692..3338456) /gene="kdsB" /locus_tag="PA2979" /EC_number="2.7.7.38" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-deoxy-manno-octulosonate cytidylyltransferase" /protein_id="NP_251669.1" /db_xref="GeneID:880169" /translation="MTQAFTVVIPARYASTRLPGKPLQDIAGQPMIQRVWNQARKSAA SRVVVATDDERILAACQGFGAEALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGD EPLIPPALIDQVAANLAAHPEAAIATLAEPIHEVSALFNPNVVKVATDIDGLALTFSR APLPWARDAFARDRDSLPEGVPYRRHIGIYAYRVGFLADFVAWGPCWLENAESLEQLR ALWHGVRIHVADARENMLPGVDTPEDLERVRRVLGG" misc_feature complement(3337701..3338450) /gene="kdsB" /locus_tag="PA2979" /note="3-deoxy-manno-octulosonate cytidylyltransferase; Provisional; Region: PRK05450" /db_xref="CDD:235473" misc_feature complement(order(3338151..3338153,3338157..3338159, 3338226..3338228,3338307..3338309,3338421..3338429)) /gene="kdsB" /locus_tag="PA2979" /note="Ligand binding site [active]" /db_xref="CDD:133010" misc_feature complement(order(3337788..3337799,3337818..3337826, 3337833..3337838,3337911..3337913,3337962..3337982, 3337986..3337991,3338007..3338015,3338031..3338033, 3338082..3338084)) /gene="kdsB" /locus_tag="PA2979" /note="oligomer interface [active]" /db_xref="CDD:133010" gene complement(3338456..3338641) /locus_tag="PA2980" /db_xref="GeneID:880502" CDS complement(3338456..3338641) /locus_tag="PA2980" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251670.1" /db_xref="GeneID:880502" /translation="MDPKLLDILACPLTKGPLVLSEDKTELISKQAGLAYPIRDGIPV MLESEARSLNVDERLDK" misc_feature complement(3338465..3338641) /locus_tag="PA2980" /note="RNA methyltransferase activator Trm112/YbaR [Translation, ribosomal structure and biogenesis]; Region: Trm112; COG2835" /db_xref="CDD:442083" gene complement(3338679..3339677) /gene="lpxK" /locus_tag="PA2981" /db_xref="GeneID:880503" CDS complement(3338679..3339677) /gene="lpxK" /locus_tag="PA2981" /EC_number="2.7.1.130" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tetraacyldisaccharide 4'-kinase" /protein_id="NP_251671.1" /db_xref="GeneID:880503" /translation="MSFSERLLAAWYQGHPALALLRPLEALYRRVANGRRADFLSGRK PAYRAPLPVLVVGNITVGGTGKTPMILWMIEHCRARGLRVGVISRGYGARPPTTPWRV RAEQDAAEAGDEPLMIVRRSGVPLMIDPDRPRALQALLAEEQLDLVLCDDGLQHYRLA RDLELVLIDAARGLGNGRCLPAGPLREPAERLESVDALLYNGADEDPDGGYAFRLQPT ALINLQSGERRPLEHFPAGQEVHALAGIGNPQRFFRTLEALHWRAIPHAFPDHATYTA AELAFSPPLPLLMTEKDAVKCRAFAAADWWYLAVDAVPSPAFVAWFDARLEHLLAR" misc_feature complement(3338694..3339671) /gene="lpxK" /locus_tag="PA2981" /note="tetraacyldisaccharide 4'-kinase; Reviewed; Region: lpxK; PRK00652" /db_xref="CDD:234808" gene complement(3339677..3340117) /locus_tag="PA2982" /db_xref="GeneID:878710" CDS complement(3339677..3340117) /locus_tag="PA2982" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251672.1" /db_xref="GeneID:878710" /translation="MKFRRRRAGAAREDVFINLASLIDVIFVLLLFFVVSTTFTRPEQ LNIELPSAESGETAGTEQKQLELSVDAEGHYALNGQALAKSDLATLMAAMQRESAGDN NLPVVISADAKSTHQSVVTAMDAAGKLGFVHLRITTVENTAAKP" misc_feature complement(3339698..3340069) /locus_tag="PA2982" /note="Biopolymer transport protein ExbD [Intracellular trafficking, secretion, and vesicular transport]; Region: ExbD; COG0848" /db_xref="CDD:440609" gene complement(3340114..3340749) /locus_tag="PA2983" /db_xref="GeneID:878711" CDS complement(3340114..3340749) /locus_tag="PA2983" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="translocation protein TolQ" /protein_id="NP_251673.1" /db_xref="GeneID:878711" /translation="MWELVQAGGWMMLPIILSSIAATAIVAERLWTLRKSRVAPPELL GQVWKQIKGKQLSAQKLKDLRANSPLGEILAAGLANSKHGREIMKECIEEAASGVIHE LERYLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSPMLAAGISKALITTAA GLLVAIPAVFFHRYLLRRVDELVIAMEQEAIKLVEVVQGDREVDYVEEGKA" misc_feature complement(3340162..3340749) /locus_tag="PA2983" /note="Biopolymer transport protein ExbB/TolQ [Intracellular trafficking, secretion, and vesicular transport]; Region: TolQ; COG0811" /db_xref="CDD:440573" gene complement(3340822..3343047) /locus_tag="PA2984" /db_xref="GeneID:880135" CDS complement(3340822..3343047) /locus_tag="PA2984" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251674.1" /db_xref="GeneID:880135" /translation="MRLGLPALAAGLLALRFLAELPSVGWLLGMAAAGLLLLFGRLYW LGLFLLGFAWACGSAQVALDGRLAAELDGRTLWLEGRVVDLPASGEGVTRFRLEEVSA ARGVLLPERLRLSWRGAPPLMGGERWRLAVTLKRPRGLVNAAGFDYEAWLLAQRVGAV GTVKAGQRLQPASGLDAWRDAWRQRLLAVDAQGRGAALAALVLGDGSGLSAAEWRMFQ DTGTVHLMVISGSHISLLAGMLYGLVAALHRLGCWPRRLPWLPCACALGLLGAWSYGL MAGFEVPVRRACLMVSLALVWRLRFRHLGLLTPLLATLVLVLLVEPLASLQAGFWLSF LAVALLLWLFAGRLGRWRWWAAWGRAQWGMALGLAMPLLALGLPLSLSGAPANLLAVP WIELLVVPPALAGSLLLWVPGLGEGLLRAAGVSLDLLFRALGLLAGLAEAWQPPAAAA WSVALGMLGALCWLAPAGLPLRALGAALLLPALLPSSPPVEWGRAEVRVLDVGQGLAV LVRTREHVLLYDSGARQGAFDMGERVVVPVLRSLDLRRLDGLLLSHADNDHAGGAPTV ASRFPPVWLVSGEPARLPSPLFADSCDERSWSWDGVVFEQWAWAQAGDSNDRSCVLRV EADGEVLLLTGDISRAAEHAWLARQADPRVDWLLAPHHGSRSSSGVAFVLRTRPRHVL VSRGWRNAFGHPHGEVMERYARVAAQVHDTARDGALTFLLGSRGGARRERDSAHFWRE K" misc_feature complement(3342541..3342987) /locus_tag="PA2984" /note="Domain of unknown function (DUF4131); Region: DUF4131; pfam13567" /db_xref="CDD:379269" misc_feature complement(3340900..3342717) /locus_tag="PA2984" /note="mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain; Region: metallo-hydrolase-like_MBL-fold; cl23716" /db_xref="CDD:451500" misc_feature complement(3340870..3341562) /locus_tag="PA2984" /note="DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily [Intracellular trafficking, secretion, and vesicular transport]; Region: ComEC; COG2333" /db_xref="CDD:441904" gene 3343178..3343711 /locus_tag="PA2985" /db_xref="GeneID:880136" CDS 3343178..3343711 /locus_tag="PA2985" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251675.1" /db_xref="GeneID:880136" /translation="MPRRLFKRYMPDPESIRSQKSLRFLGKLTHDPNLWHLNRHSVSR AMAAGLFAAFIPMPMQMLLAAGLAVWIRSNLPISVGLVWLTNPITMPPVFYCTYKLGA WLMQVPPRTLPDHLTWEWISQELSSLWQPFLLGSVVCGIIAAILGYALTMLYWRWWVQ RSWSRRCRQRRERVAAK" misc_feature 3343178..3343660 /locus_tag="PA2985" /note="Uncharacterized conserved protein, DUF2062 family [Function unknown]; Region: COG3216" /db_xref="CDD:442449" gene complement(3343799..3345100) /locus_tag="PA2986" /db_xref="GeneID:880596" CDS complement(3343799..3345100) /locus_tag="PA2986" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251676.1" /db_xref="GeneID:880596" /translation="MPAVRSRPANPPSTRCIRDMFRPLPFFIGLRYTRAKRRNHYISF ISLTSMIGLALGVLAMIIVLSVMNGFQKEMRTRILGMVPHATISAAQPLDDWQTVANA ALRHREVVGAAPFAELQGMLSYKGNMLPVLVNGIDPQEERKVSIVGEHIVQGSLDDLK PGEFGIVLGEITARRFHVNVGDKLTLIVPEATSAPGGITPRMQRFTIVALFKVGAELD NSLALIDIADAGQLLRLQPGQVPSVRLELKDLYQSPQVAAKVVKELGQGFRSSDWTRT QGSLFNAMKMEKTMIGLLLLLIIAVAAFNIIATLIMVVADKRTDIAILRTLGATPRQI MAIFMVQGTVIGVIGTVIGGVLGVFAALNITGMIDRIERLVGHKVFSSDVYFINYLPS DLQVLDVVLICSAALLMSFLATLYPSWRAARTQPAESLRYE" misc_feature complement(3343802..3345034) /locus_tag="PA2986" /note="lipoprotein releasing system, transmembrane protein, LolC/E family; Region: lolCE; TIGR02212" /db_xref="CDD:274034" gene complement(3345113..3345796) /locus_tag="PA2987" /db_xref="GeneID:880597" CDS complement(3345113..3345796) /locus_tag="PA2987" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="lipoprotein-releasing system ABC transporter ATP-binding protein" /protein_id="NP_251677.1" /db_xref="GeneID:880597" /translation="MNDKSVLSCRNLSKSYDEGPQSVQVLSGVELNLLPGERVAIVGS SGSGKSTLLNMLGGLDTPSAGSVWLAGEELSALNETARGLLRNRALGFVYQFHHLLPE FTALENVCMPLLIGRTPIAEARQRAAELLERVGLGHRLSHKPAELSGGERQRVAIARA LVNRPQLVLLDEPTGNLDQHTAQGIQELMLELSRSLQTSFLVVTHDLQLAGHMDRILR LEEGRLIAA" misc_feature complement(3345119..3345787) /locus_tag="PA2987" /note="ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]; Region: LolD; COG1136" /db_xref="CDD:440751" gene complement(3345789..3347039) /locus_tag="PA2988" /db_xref="GeneID:880587" CDS complement(3345789..3347039) /locus_tag="PA2988" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251678.1" /db_xref="GeneID:880587" /translation="MFRPLSVFIGTRYTRAKRRSHFVSFISLTSMIGLALGVLVMIVV LSVMNGFDREMRTRILGMVPQATVESYQPIDDWRALAEKVKAHEHVTAVAPFTQMQGM LSANGAVQTVMVDAVDPLEEAKVSIIPDFFKQGSLAELKAGGFGIVIGQLAAQKLGVG IGDKVTLILPEVAVTPAGVFPRMKRFTVVGTFRVGAGELDGGLSLIHLEDAARLQRWK TNQVQGLRLKLDDLFQAPRVAWEIARTLTDNDFYARDWTRSHGNLYQAIRMEKTMIGL LLLLIVAVAAFNIISTLVMVVTDKKSDIAILRTLGATPGQIMATFMVQGTVIGVIGTL VGGVLGVVAALNVSAWISALEKLLGHQFLASDVYFIDYLPSQLMLDDVVLVCGAALVL SFFATLYPAWRAARTQPAEALRYE" misc_feature complement(3345792..3347030) /locus_tag="PA2988" /note="lipoprotein releasing system, transmembrane protein, LolC/E family; Region: lolCE; TIGR02212" /db_xref="CDD:274034" gene 3347142..3347741 /locus_tag="PA2989" /db_xref="GeneID:880588" CDS 3347142..3347741 /locus_tag="PA2989" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251679.2" /db_xref="GeneID:880588" /translation="MSTRDADDRREYYRIEDTLALEFRPAGAVEDGLESEPGATLFSL LSDLHLMDYESQHLLRHISERDRTLANYLKVMNKRIDLLGQVMVQSLLKEIGEPRKVS LSEGGVSFRHDRALPVGQLLVLRMVLLPQGFGLELRARVIHAQPHDDEFEIGTEFEAL SDAQRQLLARHILQKQAQQRRLARAGQGPLGEPGQPSST" misc_feature <3347448..3347690 /locus_tag="PA2989" /note="Cyclic di-GMP-binding flagellar brake protein FlgZ/YcgR, contains PilZNR(YcgR) and PilZ domains [Cell motility]; Region: YcgR; COG5581" /db_xref="CDD:444320" gene 3348073..3348795 /locus_tag="PA2990" /db_xref="GeneID:878678" CDS 3348073..3348795 /locus_tag="PA2990" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phosphodiesterase" /protein_id="NP_251680.1" /db_xref="GeneID:878678" /translation="MTLIYGHRGAKGEAPENTLASFQRCLEHGVNRCELDLHLSRDGE LMVIHDPTLKRTTGRRGKVAEHDAATLATYDARKGGPGWVRPTPIPRLEELFEKCPFE HWQLEVKSASRERAARTVTRIRELTERFGNRDKVTVTSGSRTVLKALNELTPELSRGL VAEYAWLDPLKVAQHYGCALLALNWTLCTPERLLKAQRQGLHVSVWTVNEPALMRRLA DFGVDSLITDFPGLASATLGNR" misc_feature 3348073..3348783 /locus_tag="PA2990" /note="Glycerophosphoryl diester phosphodiesterase [Lipid transport and metabolism]; Region: UgpQ; COG0584" /db_xref="CDD:440349" gene complement(3348838..3350232) /gene="sth" /locus_tag="PA2991" /db_xref="GeneID:878679" CDS complement(3348838..3350232) /gene="sth" /locus_tag="PA2991" /EC_number="1.6.1.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="soluble pyridine nucleotide transhydrogenase" /protein_id="NP_251681.1" /db_xref="GeneID:878679" /translation="MAVYNYDVVILGTGPAGEGAAMNASKYGRKLAVVDSRRVVGGNC THLGTIPSKALRHSVKQIIEFNTNPMFRQIGEPRWFSFPDVLKSADRVISKQVASRTG YYARNRIDMFTGTASFVDERTVEVVTPSGAVERLVADQFVIATGSRPYRPSDINFNHP RVYDSDTILSLSHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDTRDQLLSFLDDEI SDALSYHLRNNNVLIRHNEEYERVEGLDNGVILHLKSGKKIKADALLWCNGRTGNTDK LGLENVGIKVNSRGQIEVDENYRTSVSNIFAAGDVIGWPSLASAAYDQGRSAAGNIVE SDSWRFVNDVPTGIYTIPEISSIGKNESELTAAKIPYEVGKAFFKGMARAQISNEPVG MLKILFHRETLEILGVHCFGDQASEIVHIGQAIMNQPGELNTLKYFVNTTFNYPTMAE AYRVAAFDGLNRLF" misc_feature complement(3348841..3350232) /gene="sth" /locus_tag="PA2991" /note="Si-specific NAD(P)(+) transhydrogenase; Region: PRK05249" /db_xref="CDD:235373" gene complement(3350411..3350638) /locus_tag="PA2992" /db_xref="GeneID:880126" CDS complement(3350411..3350638) /locus_tag="PA2992" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251682.1" /db_xref="GeneID:880126" /translation="MTWLLVFVIMLLVVFGMSIGVIMGRKPIAGSCGGIANLGIEKEC SICGGDRQKCEEANRDESVVPGKLAYDATKR" misc_feature complement(3350456..3350638) /locus_tag="PA2992" /note="Na+-NQR maturation protein NqrM [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]; Region: NqrM; COG2991" /db_xref="CDD:442230" gene complement(3350635..3351663) /locus_tag="PA2993" /db_xref="GeneID:880127" CDS complement(3350635..3351663) /locus_tag="PA2993" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251683.1" /db_xref="GeneID:880127" /translation="MAERFRPLAMAGLAALALVLAGCGDTLESFGGPTMGSTYSIKYV RGASAPDVQTAKAAVEAILAEVDRQMSTYRDDSLVSRFNALPAQSCMELPLPMLELLR YGGELSEQSQGAFDMTVEPLMNLWGFGPQARVEKVPSAEQIAAVRRDVGHRHLRIDGQ RLCKDAAVQLDFDSIAAGYTVDAVGERLKELGVRSYLAEITGELKAEGRKPDGTPWRI AIEAPREGQRVAQQVLALDGYGVSTSGDYRNYFEENGQRYSHTFDPRTGAPIDHHLAS VTVIDPSTRNADGLSTLLMVLGPEEGYRFAEKHRLAALFVSRQGNGFDSRTTPRYEQL FGNQGERP" misc_feature complement(3350695..3351561) /locus_tag="PA2993" /note="FAD:protein FMN transferase ApbE [Coenzyme transport and metabolism, Posttranslational modification, protein turnover, chaperones]; Region: ApbE; COG1477" /db_xref="CDD:441086" protein_bind complement(3351003..3351015) /locus_tag="PA2993" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA2992" /bound_moiety="AmrZ" gene complement(3351656..3352879) /gene="nqrF" /locus_tag="PA2994" /db_xref="GeneID:878840" CDS complement(3351656..3352879) /gene="nqrF" /locus_tag="PA2994" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="Na(+)-translocating NADH-quinone reductase subunit F" /protein_id="NP_251684.1" /db_xref="GeneID:878840" /translation="MIGFEIFLAIGMFTAIVLGLVAIILVARAKLVSSGDVTIQINGE HSLTVPAGGKLLQTLAANNVFLSSACGGGGTCAQCKCVVVEGGGEMLPTEESHFTRRQ AKEGWRLSCQTPVKQDMQIRVPEEVFGVKKWECTVESNPNVATFIKELTLRLPDGESV DFRAGGYVQLECPPHVVEYKDFDIQPEYRGDWDKFNMWRYVSKVDETVIRAYSMANYP EEKGVVKFNIRIASPPPGSDLPPGQMSSWVFNLKPGDKVTVYGPFGEFFAKDTEAEMV FIGGGAGMAPMRSHIFDQLRRLKSNRKISFWYGARSLREAFYTEEYDQLQAENPNFQW HLALSDPQPEDNWTGLTGFIHNVLFENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLTD LGVERENILLDDFGG" misc_feature complement(3351659..3352864) /gene="nqrF" /locus_tag="PA2994" /note="NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; Region: nqrF; TIGR01941" /db_xref="CDD:130996" gene complement(3352890..3353498) /gene="nqrE" /locus_tag="PA2995" /db_xref="GeneID:880456" CDS complement(3352890..3353498) /gene="nqrE" /locus_tag="PA2995" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="Na(+)-translocating NADH-quinone reductase subunit E" /protein_id="NP_251685.1" /db_xref="GeneID:880456" /translation="MEHYISLFVKAVFVENMALAFFLGMCTFIAISKKVETAIGLGIA VIVVQTITVPANNLIYTYLLKDGALAWAGLPEVDLSFLGLLSYIGVIAAIVQILEMLL DKYVPSLYNALGVFLPLITVNCAIMAGSLFMVERDYNLAESTVYGVGSGFSWALAIAA LAGIREKLKYSDVPEGLQGLGITFITIGLMSLGFMSFSGVQL" misc_feature complement(3352893..3353498) /gene="nqrE" /locus_tag="PA2995" /note="Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE [Energy production and conversion]; Region: NqrE; COG2209" /db_xref="CDD:441811" gene complement(3353498..3354172) /gene="nqrD" /locus_tag="PA2996" /db_xref="GeneID:880457" CDS complement(3353498..3354172) /gene="nqrD" /locus_tag="PA2996" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="Na(+)-translocating NADH-quinone reductase subunit D" /protein_id="NP_251686.1" /db_xref="GeneID:880457" /translation="MMAAQPTIREVLFNPVFQNNPIGLQILGICSALAVTSNLKTATV MAIALTLVTGFSNLFISMIRRQIPSSIRMIVQMVIIASLVIVVDQVLKAYAYSLSKQL SVFVGLIITNCIVMGRAEAFAMANPPLVSFFDGIGNGLGYSAMLLVLGFVRELFGAGK LYGISVLPTVNDGGWYQPNGLLLLPPSAFFLIGLIIWALRTWKKDQVEAPTYKMAPQV SSKEAY" misc_feature complement(3353546..3354169) /gene="nqrD" /locus_tag="PA2996" /note="Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD [Energy production and conversion]; Region: NqrD; COG1347" /db_xref="CDD:440958" gene complement(3354169..3354954) /gene="nqrC" /locus_tag="PA2997" /db_xref="GeneID:880204" CDS complement(3354169..3354954) /gene="nqrC" /locus_tag="PA2997" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="Na(+)-translocating NADH-quinone reductase subunit C" /protein_id="NP_251687.1" /db_xref="GeneID:880204" /translation="MANQESTTRTLLVALVVCLVSSVFVAGAAVALKPTQAENRLLDK QRSILAIAGLGEPGMSGKEVKALFDSRITAKVVDLQSGTFSDAQDPLGYDPLKAAKDP ALSDALPAAEDIASIKRRERYTTVYLVETDGKLDTLILPVRGYGLWSTLYGFLALKGD LNTVAGFGFYQHGETPGLGGEVDNPKWKALWVGKTLYDAQGDLAVQIIKGSVDPQSAK ATHQVDGLAGATLTSKGVDNLLHFWLGKDGFDAFLANLRKGEA" misc_feature complement(3354172..3354891) /gene="nqrC" /locus_tag="PA2997" /note="Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC [Energy production and conversion]; Region: NqrC; COG2869" /db_xref="CDD:442116" gene complement(3354947..3356158) /gene="nqrB" /locus_tag="PA2998" /db_xref="GeneID:880205" CDS complement(3354947..3356158) /gene="nqrB" /locus_tag="PA2998" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="Na(+)-translocating NADH-quinone reductase subunit B" /protein_id="NP_251688.1" /db_xref="GeneID:880205" /translation="MGLRNLLDKVEHHFEKGGRYEKWYPLYEAVDTFLYRPGSVTRTT AHVRDGIDLKRMMIIVWLCTFPAMFFGMYNVGHQANLIFAQSPDLLSAQDGWRFALIG ALAGFDPNSLWDCLVQGAAYFLPVYLTTFIVGGFWEVLFASIRRHEVNEGFFVTSVLF ALTLPPSVPLWQVALGISFGVVLGKEVFGGTGKNFLNPALVGRAFLFFAYPAQMSGDA VWTSVDGFAGATSLSLAAAGGVDNILGHGLTWMDAFLGHMQGSMGETSTLAIFIGGAV LLLTRIASWRIVAGVMLGMVAMSYLFNAIGSASNPMFAMPWYWHLVTGGFAFGMIFMA TDPVSASMTDTGKWLFGALIGVMVMLIRVVNPAFPEGMMLAILFANLFAPLIDHFVVQ ANIKRRLARNG" misc_feature complement(3354950..3356158) /gene="nqrB" /locus_tag="PA2998" /note="Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB [Energy production and conversion]; Region: NqrB; COG1805" /db_xref="CDD:441410" gene complement(3356162..3357499) /gene="nqrA" /locus_tag="PA2999" /db_xref="GeneID:880558" CDS complement(3356162..3357499) /gene="nqrA" /locus_tag="PA2999" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="Na(+)-translocating NADH-quinone reductase subunit A" /protein_id="NP_251689.1" /db_xref="GeneID:880558" /translation="MIKIKRGLDLPISGAPEQRIEAARPVRSVALIGFDYHGMKPTMA VQVGDRVKLGQVLFTDKKNPSVSYTAPGAGVVSAIHRGEKRVLQSVVIDLDGDEQLEF ARYPADKLATLSAEQVRDNLLQSGLWTALRTRPFSKVPDPESSPSSIFVTAIDTQPLA ADPQVVIAEQGEAFQAGLTVLGRLARVFLCKAEGVSLPGEALSGVTAQAFSGPHPAGL PGTHIHFLDPVGAGKSVWNLNYQDVIAIGKLFTTGQLWTERVIALAGPVVEKPRLVRT RLGANLDELAAGQLQPGNNRLISGSVLGGRTAHGAYAYLGRYHLQLSCLKEGDQREFL HYLRAGVEKHSLLNVFVSRLLGGKRFAFTTSTNGSPRAMVPVGNYEAVMPLDILPTQL LRYLIVGDTEMAQKLGALELDEEDLALCSYVCAGKYEYGPILRDNLARIEQEG" misc_feature complement(3356168..3357496) /gene="nqrA" /locus_tag="PA2999" /note="Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA [Energy production and conversion]; Region: NqrA; COG1726" /db_xref="CDD:441332" gene complement(3357758..3359167) /gene="aroP1" /locus_tag="PA3000" /db_xref="GeneID:880559" CDS complement(3357758..3359167) /gene="aroP1" /locus_tag="PA3000" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aromatic amino acid transporter AroP" /protein_id="NP_251690.1" /db_xref="GeneID:880559" /translation="MDGQHLHQGELKRGLKNRHIQLIALGGAIGTGLFLGSAGVIKTA GPSMILGYAIGGFIAFLIMRQLGEMIVEEPVAGSFSHFAHKYWGGFAGFLSGWNYWVL YILVGMSELTAVGKYIQYWWPDVPTWATAAAFFVLINAINLANVKAFGETEFWFAIIK VAAIVGMILLGIYLLVGGGGGPQASVSNLWDRGGFFPNGLSGLVMTLAIIMFSFGGLE LVGITAAEASEPRKVIPKAINQVIYRILIFYIGALAVLLSLYPWDQLVETINASGDDY SGSPFVQIFSLIGSGTAANILNFVVLTAALSVYNSGVYCNSRMLYGLAAQGDAPKVLM SVDRRGVPVLSILVSALITFLCVIVNYVLPHKALELLMSLVVAALVINWAMISLSHLK FRAAMKRQGVDTFFKALWSPFSNYLCLAFVLFILGIMLMIPGINISVYAIPFWLLLMW LCYRVKLSLAERRGLGQQA" misc_feature complement(3357800..3359167) /gene="aroP1" /locus_tag="PA3000" /note="Amino acid permease; Region: AA_permease_2; cl45918" /db_xref="CDD:459263" gene complement(3359269..3360654) /locus_tag="PA3001" /db_xref="GeneID:880414" CDS complement(3359269..3360654) /locus_tag="PA3001" /EC_number="1.2.1.12" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase" /protein_id="NP_251691.1" /db_xref="GeneID:880414" /translation="MIPLIGQLYRNNNVVTSIHGRGLINRSVIAIMKAHRFARHRMAD DAELSVHETFPILKAMSELKLGAASVDLGKMVAKFKAEGNGRSIEDFVKAELAEVVGK QNGDAREGTDVVLYGFGRIGRLLARILIEKTGGGDGLRLRAIVVRKGAENDLVKRASL LRRDSVHGPFDGTITIDEENNTLTANGNLIQVIYSNDPASIDYTQYGIKNALLVDNTG KWRDAEGLGQHLKCPGIDRVVLTAPGKGALKNIVHGINHTDIGADDKIISAASCTTNA IVPVLKAVNDQYGIVNGHVETVHSYTNDQNLIDNFHKGSRRGRSAPLNMVITETGAAT AAAKALPVLKGKLTGNAIRVPTPNVSMAILNLNLEKATTREEINEYLRQMAMHSDLQK QIDFVSSQEVVSTDFVGSRHAGVVDAEATICNDNRVVLYVWYDNEFGYSCQVVRVMED MAGVNPPAFPR" misc_feature complement(3359275..3360654) /locus_tag="PA3001" /note="glyceraldehyde-3-phosphate dehydrogenase; Reviewed; Region: PRK08289" /db_xref="CDD:236219" gene 3360875..3364321 /gene="mfd" /locus_tag="PA3002" /db_xref="GeneID:880415" CDS 3360875..3364321 /gene="mfd" /locus_tag="PA3002" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcription-repair coupling factor" /protein_id="NP_251692.1" /db_xref="GeneID:880415" /translation="MSVLRLPSLPASAGKQHWGNLPGAALSLAVAEAASSAKRFTLLL TADSQNAERLEQELRFFAPDLPVLHFPDWETLPYDVFSPHQDIISQRIAALYQLPQLK HGVLVVPISTALHRLAPTRFLLGSSLVLDVGQKLDVERMRLRLEGAGYRCVDTVYEHG EFAVRGALIDLFPMGSELPFRIDLFDDEIETLRTFDPETQRSIDKVESIRLLPAREFP LNKEAVTGFRGRFRERFDVDYRRCPIYQDLASGLTPSGIEYYLPLFFEETATLFDYLP QDTQVFSLPGIEQAAEQFWNDVRSRYEDRRVDPERPLLPPAEVFLPVEDCFARLKNWP RVVASQEDVEPGVGRERFPALPLPNLAIEAKAAEPLAALRRFIEEFPGRVLFCAESAG RREVLLELLARLKLRPEEVDGWPAFLASQARLAISIAPLDEGLLLDHPALALVAESPL FGQRVMQRRRREKTRDGGDAVIKNLTELREGAPVVHIDHGVGRYLGLITLEVDNQQAE FLMLQYAEDAKLYVPVANLHLIARYTGADDALAPLHRLGSETWQKAKRKAAEQVRDVA AELLDIYARRAAREGFAFKDPQADYATFSAGFPFEETPDQQSAIEAVVADMLAPRPMD RLVCGDVGFGKTEVAMRAAFVAVHSGKQVAVLVPTTLLAQQHYNSFRDRFADWPVSVE VMSRFKSAKEVENAARLLAEGKIDILIGTHKLLQEDVKFANLGLVVIDEEHRFGVRQK EQLKALRSEVDILTLTATPIPRTLNMAVSGMRDLSIIATPPARRLSVRTFVMEQQNAV IKEALLRELLRGGQVYYLHNEVKTIEKCARDLAELVPEARIGIGHGQMHERELEQVMS DFYHKRFNVLVASTIIETGIDVPSANTILIERADKFGLAQLHQLRGRVGRSHHQAYAY LLTPPRRQMTPDAEKRLEAIANAQDLGAGFVLATHDLEIRGAGELLGDGQSGQIQAVG FTLYMEMLERAVKAIRKGEQPNLEQPLGGGPEVNLRVPALIPEDYLPDVHARLILYKR IANAPDEEGLRELQVEMIDRFGLLPDPAKNLMRLTLLKLQAEKLGILKVDAGPQGGRI EFAADTQVDPLVLIKLIQGQPNRYKFEGATLFRFQVPMERPEERFNTLEALFERLTPQ TT" misc_feature 3360908..3364309 /gene="mfd" /locus_tag="PA3002" /note="Transcription-repair coupling factor (superfamily II helicase) [Replication, recombination and repair, Transcription]; Region: Mfd; COG1197" /db_xref="CDD:440810" gene 3364332..3364961 /locus_tag="PA3003" /db_xref="GeneID:880520" CDS 3364332..3364961 /locus_tag="PA3003" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251693.1" /db_xref="GeneID:880520" /translation="MRLFRCLALLLSLAAPAAFAGGPYQVELVVFRQAGDAVPSSQPA PDDWATGAQPLASDALRATALDNQLAKLSQDNGYTVLLHKAWRQDIGETPVKIALSEG QEQDHHFPVEGTLTLSQVRFVDMEADFWVNRFGDDGFLAGSQHIRQGTRLKNGELTYL DHPSLGILIKVVPVGARPAAPNPMEMEEQQAPADAPPVEGGFDAAPPAQ" misc_feature 3364401..3364853 /locus_tag="PA3003" /note="Peptidoglycan-binding protein, CsiV; Region: CsiV; pfam10972" /db_xref="CDD:431567" gene complement(3365007..3365744) /locus_tag="PA3004" /db_xref="GeneID:880215" CDS complement(3365007..3365744) /locus_tag="PA3004" /EC_number="2.4.2.28" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="S-methyl-5'-thioinosine phosphorylase" /protein_id="NP_251694.1" /db_xref="GeneID:880215" /translation="MSVYAIIGGTGLTQLEGLTLSESLPIETPYGAPSAPLQRGRYAG REVLFLARHGHPHRFPPHQVNYRANLWALKQAGAEAVIAVNAVGGIHAAMGTGHLCVP HQLIDYTSGREHTYFAGDIEHVTHIDFSHPYDEPLRQRLIEALRALGLAHSSHGVYAC TQGPRLETVAEIARLERDGNDIVGMTGMPEAALARELDLPYACLALVVNPAAGKSAGI ITMAEIEQALHDGIGKVREVLARVLAG" misc_feature complement(3365010..3365738) /locus_tag="PA3004" /note="S-methyl-5'-thioinosine phosphorylase; Region: PRK09136" /db_xref="CDD:236390" misc_feature complement(order(3365073..3365075,3365082..3365084, 3365112..3365114,3365118..3365123,3365187..3365198, 3365247..3365249,3365262..3365264,3365367..3365369, 3365481..3365492,3365562..3365564,3365586..3365591, 3365718..3365720)) /locus_tag="PA3004" /note="active site" /db_xref="CDD:350161" misc_feature complement(order(3365187..3365189,3365487..3365492, 3365586..3365591,3365718..3365720)) /locus_tag="PA3004" /note="phosphate binding site [ion binding]; other site" /db_xref="CDD:350161" misc_feature complement(order(3365082..3365084,3365109..3365111, 3365169..3365171,3365190..3365192,3365208..3365213, 3365223..3365225,3365232..3365255,3365355..3365369, 3365391..3365396,3365400..3365405,3365421..3365435, 3365556..3365570)) /locus_tag="PA3004" /note="homohexamer interface [polypeptide binding]; other site" /db_xref="CDD:350161" gene complement(3365756..3366754) /gene="nagZ" /locus_tag="PA3005" /db_xref="GeneID:880216" CDS complement(3365756..3366754) /gene="nagZ" /locus_tag="PA3005" /EC_number="3.2.1.52" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="beta-hexosaminidase" /protein_id="NP_251695.1" /db_xref="GeneID:880216" /translation="MQGSLMLDIGGTWLTAEDRQILRHPEVGGLIIFARNIEHPAQVR ELCAAIRAIRPDLLLAVDQEGGRVQRLRQGFVRLPAMRAIADNPNAEELAEHCGWLMA TEVQAVGLDLSFAPVLDLDHQRSAVVGSRAFEGDPERAALLAGAFIRGMHAAGMAATG KHFPGHGWAEADSHVAIPEDARSLEEIRRSDLVPFARLAGQLDALMPAHVIYPQVDPQ PAGFSRRWLQEILRGELKFDGVIFSDDLSMAGAHVVGDAASRIEAALAAGCDMGLVCN DRASAELALAALQRLKVTPPSRLQRMRGKGYANTDYRQQPRWLEALSALRAAQLID" misc_feature complement(3365768..3366751) /gene="nagZ" /locus_tag="PA3005" /note="beta-hexosaminidase; Provisional; Region: PRK05337" /db_xref="CDD:235417" gene complement(3366970..3367671) /gene="psrA" /locus_tag="PA3006" /db_xref="GeneID:879874" CDS complement(3366970..3367671) /gene="psrA" /locus_tag="PA3006" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator PsrA" /protein_id="NP_251696.1" /db_xref="GeneID:879874" /translation="MAQSETVERILDAAEQLFAEKGFAETSLRLITSKAGVNLAAVNY HFGSKKALIQAVFSRFLGPFCASLEKELDRRQAKPEAQHATLEDLLHLLVSQAMAVKP RSGNDLSIFMRLLGLAFSQSQGHLRKYLEEVYGKVFRRYMLLVNEAAPKLPPIELFWR VHFMLGAAAFSMSGIKALRAMAETDFGVNTSTEQVMHLMVPFFAAGMRAESGIDDPLL AGAQLRPRNKTPAKA" misc_feature complement(<3367387..3367650) /gene="psrA" /locus_tag="PA3006" /note="forespore capture DNA-binding protein RefZ; Region: septum_RefZ; NF037937" /db_xref="CDD:468281" misc_feature complement(3367054..3367395) /gene="psrA" /locus_tag="PA3006" /note="Tetracyclin repressor-like, C-terminal domain; Region: TetR_C_30; pfam17939" /db_xref="CDD:465577" protein_bind 3367857..3367876 /experiment="EMSA [PMID: 15458417]" /experiment="qRT-PCR [RNA] [PMID: 15458417]" /note="'Transcription factor binding site for NP_251697.; Evidence of regulation for: PA3007, PA3008'" /bound_moiety="LexA" protein_bind 3367876..3367895 /experiment="EMSA [PMID: 15458417]" /experiment="qRT-PCR [RNA] [PMID: 15458417]" /note="'Transcription factor binding site for NP_251697.; Evidence of regulation for: PA3007, PA3008'" /bound_moiety="LexA" gene 3367903..3368517 /gene="lexA" /locus_tag="PA3007" /db_xref="GeneID:879875" CDS 3367903..3368517 /gene="lexA" /locus_tag="PA3007" /EC_number="3.4.21.88" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="LexA repressor" /protein_id="NP_251697.1" /db_xref="GeneID:879875" /translation="MQKLTPRQAEILSFIKRCLEDHGFPPTRAEIAQELGFKSPNAAE EHLKALARKGAIEMTPGASRGIRIPGFEPHAANDDEGLPVIGRVAAGAPILAEQNIEE SCRINPAFFNPRADYLLRVRGMSMKDIGILDGDLLAVHVTREARNGQVVVARIGEEVT VKRFKREGSKVWLLAENPEFAPIEVDLKEQELIIEGLSVGVIRR" misc_feature 3367903..3368511 /gene="lexA" /locus_tag="PA3007" /note="SOS regulatory protein LexA; Region: lexA; TIGR00498" /db_xref="CDD:273106" gene 3368529..3369014 /locus_tag="PA3008" /db_xref="GeneID:880164" CDS 3368529..3369014 /locus_tag="PA3008" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="cell division inhibitor SulA" /protein_id="NP_251698.1" /db_xref="GeneID:880164" /translation="MQTSHSLPSAQLPLFQEAFWASNGAPLLDDVIDSPSSASIEEPA AFSELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERI LLLQAKDNAAALALSCEALRLGRSHTVVSWLEPLSRAARKQLSRAAQLGQAQSLNIRL G" misc_feature 3368529..3369011 /locus_tag="PA3008" /note="SOS-induced cell division inhibitor SulA, Pseudomonas type; Region: SOS_SulA_aeru; NF041583" /db_xref="CDD:469468" gene complement(3369036..3369269) /locus_tag="PA3009" /db_xref="GeneID:880165" CDS complement(3369036..3369269) /locus_tag="PA3009" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251699.1" /db_xref="GeneID:880165" /translation="MPTSFLEIVEMPDGRIVLRRADDEEALVTLEFSGDAKNFLQGQH VEVAKAMFNVGVQMAGRLAEGEMEHDEGPRVLH" gene complement(3369475..3369993) /locus_tag="PA3010" /db_xref="GeneID:880352" CDS complement(3369475..3369993) /locus_tag="PA3010" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251700.1" /db_xref="GeneID:880352" /translation="MAQELYTRTNQKLYFAGLALEAWKRADAERAMNAQAIIQGERES ALFHLYGAVLGVCHEIAGYYRLPQAAAPRVDALLNAEVLAAAPSPELAELVELASQPE TWLGQLLGAYSELFLPPRPTKAAKIDPSTPLIVAVSIDEEAPLLSRETLEEWRQSLKQ LVLRFRESLTEL" misc_feature complement(3369481..3369984) /locus_tag="PA3010" /note="Family of unknown function (DUF6586); Region: DUF6586; pfam20227" /db_xref="CDD:466378" protein_bind 3369835..3369847 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(3370100..3372706) /gene="topA" /locus_tag="PA3011" /db_xref="GeneID:880353" CDS complement(3370100..3372706) /gene="topA" /locus_tag="PA3011" /EC_number="5.99.1.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA topoisomerase I" /protein_id="NP_251701.1" /db_xref="GeneID:880353" /translation="MGKSLVIVESPAKAKTINKYLGSQYVVKSSIGHIRDLPTSGSSS SKEPAAKGRKSASEAPALSPKEKARRQLVSRMGVDPEHGWKAKYEILPGKEKVIDELR RLAKDADTVYLATDLDREGEAIAWHLREAIGGDESRYKRVVFNEITKKAIQEAFSQPG ELDINRVNAQQARRFLDRVVGYMVSPLLWQKIARGLSAGRVQSVAVKLVVEREREIRA FVPEEYWEVHADLGTAKGANVRFEVTREKGEAFKPLNEAQAMAALEKLKASAYSVAKR EDRPTSSRPSAPFITSTLQQAASNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSA DAIGMVRGFIEDEFGQKYLPGKANVYSSKEGAQEAHEAIRPSDVNLKPTQLSGMERDA ERLYDLIWRQFVACQMTPAEYLSTSVSVTAGDFELRAKGRILKFDGYTRVLPQQSKPG EDDVLPEMKEGENLKLIKLDPSQHFTKPPARYSEASLVKELEKRGIGRPSTYAAIIST IQERGYVTTHNRRFYAEKMGDIVTDRLNESFANLMDYGFTAGMEEHLDDVAQGERDWK HLLDEFYGDFKKKLEVAEVSEKGMRANQPTLTNIPCRECGRPMMIRTASTGVFLGCSG YSLPPKERCKATVNLIPGDEIAADDEGESESRVLRGKHRCPICSTAMDAYLLDEKHKL HICGNNPDCPGYEIEEGQYRIKGYEGPSLECDKCGSEMQLKTGRFGKFFGCTNPTCKN TRKLLKNGEAAPPKMDAIRMPELKCEKVDDIYVLRDGASGMFLAASQFPKNRETRAPL VSEIIPHKAELDPKYHYLCDAPQKDPDGRPAVIRFSRKTKEQYVQSEVDGKPTGWRAF YDGGKWKVEDKR" misc_feature complement(3370154..3372703) /gene="topA" /locus_tag="PA3011" /note="DNA topoisomerase I subunit omega; Validated; Region: PRK07561" /db_xref="CDD:236048" gene complement(3372797..3373171) /locus_tag="PA3012" /db_xref="GeneID:880522" CDS complement(3372797..3373171) /locus_tag="PA3012" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251702.1" /db_xref="GeneID:880522" /translation="MTPRERGFAYCAIRAYTGLLYVGIVPLFSDFRDKVRNMDLQAGL YRHYKGQNYRVLGVARHSETEEALVIYQALYGEFGLWVRPLEMFTEAVEVDGEWVPRF VLVSPEADPLGLQKAPGGEDRA" misc_feature complement(3372854..3373054) /locus_tag="PA3012" /note="Uncharacterized conserved protein, DUF1653 family [Function unknown]; Region: COG4728" /db_xref="CDD:443763" gene complement(3373254..3374429) /gene="foaB" /locus_tag="PA3013" /db_xref="GeneID:880523" CDS complement(3373254..3374429) /gene="foaB" /locus_tag="PA3013" /EC_number="2.3.1.16" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-ketoacyl-CoA thiolase" /protein_id="NP_251703.1" /db_xref="GeneID:880523" /translation="MSLNPRDVVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKLLE RNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSAL HTAAQAIQTGNGDVFVIGGVEHMGHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGK MHGISREAQDKFGARSHQLAWKATQEGKFKDEIIPMEGYDENGFLKVFDFDETIRPET TVETLAELKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRSMAV AGVDPAIMGYGPVPSTNKALKRAGLTIADIDFVELNEAFAAQALPVLKDLKLLDKMDE KVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTLGVSTMCVGLGQGITTVFERI" misc_feature complement(3373257..3374417) /gene="foaB" /locus_tag="PA3013" /note="3-ketoacyl-CoA thiolase; Reviewed; Region: fadA; PRK08947" /db_xref="CDD:181592" gene complement(3374460..3376607) /gene="faoA" /locus_tag="PA3014" /db_xref="GeneID:878680" CDS complement(3374460..3376607) /gene="faoA" /locus_tag="PA3014" /EC_number="1.1.1.35" /EC_number="4.2.1.17" /EC_number="5.1.2.3" /EC_number="5.3.3.8" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="fatty acid oxidation complex subunit alpha" /protein_id="NP_251704.1" /db_xref="GeneID:878680" /translation="MIYQGKAITVKPLEGGIVELNFDLKGESVNKFNRLTLSELRAAV DAIKADASVKGVIVTSGKDVFIVGADITEFVDNFQLPDEELMAGNLEANKIFSDFEDL DVPTVAAINGIALGGGLEMCLAADFRVMSATAKVGLPEVKLGIYPGFGGTVRLPRLIG CDNAVEWIASGKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQP KLEKLKLNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAA GFVKLAKTSVAQSLIGLFLNDQELKKKAKKYDEVAKDVKLAAVLGAGIMGGGIAYQSA LKGTPILMKDIREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFG NVDIVVEAVVENPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGM HFFNPVHMMPLVEVIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYF GGFAKLLSFGVDFVRIDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAV EGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKPKKVTDPQAYEVLKPIVVEQREVTD EDIVNFMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAE FVALADKYAELGALYHPTAKLREMAKNGQKFFG" misc_feature complement(3374463..3376607) /gene="faoA" /locus_tag="PA3014" /note="fatty acid oxidation complex subunit alpha FadB; Region: fadB; PRK11730" /db_xref="CDD:183293" protein_bind complement(3376758..3376771) /experiment="Beta-gal reporter assay [PMID: 18524913]" /experiment="DNA-array expression analysis [PMID: 18524913]" /experiment="EMSA [PMID: 18524913]" /experiment="qRT-PCR [RNA] [PMID: 18524913]" /note="'Transcription factor binding site for NP_251696.; Evidence of regulation for: PA3014, PA3013'" /bound_moiety="PsrA" protein_bind complement(3376771..3376784) /experiment="Beta-gal reporter assay [PMID: 18524913]" /experiment="DNA-array expression analysis [PMID: 18524913]" /experiment="EMSA [PMID: 18524913]" /experiment="qRT-PCR [RNA] [PMID: 18524913]" /note="'Transcription factor binding site for NP_251696.; Evidence of regulation for: PA3014, PA3013'" /bound_moiety="PsrA" gene 3377035..3377853 /locus_tag="PA3015" /db_xref="GeneID:878681" CDS 3377035..3377853 /locus_tag="PA3015" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251705.1" /db_xref="GeneID:878681" /translation="MEMEPMICRPFTLCLALLGLLSLPVFAAGTADDLLALHQMRLAT QKSLNAFFMYVGQEGDQRYASLIESSAQTAEARLQRLDGVNGSESRRLLGQLREQWRD YAQDLDKLTGAVRNKGYSDLQPVADLARRNQQLMDLGGQLYRSLQRENAATVPTLTEQ SREQSLLMQDIALDYASRNASVGASFFGGGEERPLDDLASRFSVNLLKLQQAPQNDEE IARALRSVAIKWHYIEKSLRNYNQNSVPFLVNKNADRIIDGLEKVAALYAARNQ" gene complement(3377870..3378304) /locus_tag="PA3016" /db_xref="GeneID:879098" CDS complement(3377870..3378304) /locus_tag="PA3016" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251706.1" /db_xref="GeneID:879098" /translation="MTTWLVILLLAVMLSPLAWLMPSNRQRGKMALRLEARRLGLAMQ LARQDWPHWLESAPPTSCAQFHCPRRRGREAWCYWQNTPGQWLNQWREPCADDELLDA LRSLPGDVYKVEATAQFLALYWGERGDSADLGRIAEFLRQRA" gene 3378512..3378949 /locus_tag="PA3017" /db_xref="GeneID:879099" CDS 3378512..3378949 /locus_tag="PA3017" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251707.1" /db_xref="GeneID:879099" /translation="MPYQHILVAVDLTDECDPVMKRAAALATSNQARLSVVHVVEPMA MAFGGDVPMDLSMLQQQQFDQARERLDAFAVRYPDLGSEQRHLVYGQPRQEIHRLAAE QACDLIVVGSHGRHGLALLLGSTANDVLHGAPCDVLAVHLKKA" misc_feature 3378515..3378931 /locus_tag="PA3017" /note="Nucleotide-binding universal stress protein, UspA family [Signal transduction mechanisms]; Region: UspA; COG0589" /db_xref="CDD:440354" gene complement(3378979..3379665) /locus_tag="PA3018" /db_xref="GeneID:878860" CDS complement(3378979..3379665) /locus_tag="PA3018" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251708.1" /db_xref="GeneID:878860" /translation="MAIEYRITLDDQHQLNYRIELERHYDPQAAAAAPRWTRLEHNRC SNCPLDRERYSHCPAAVDLHGVIEDFRNLPAFRKAGICVRTPEREYIKQAGLEEGLRA LIGLIMASSACPLLAPLRPMAMQHLPFASNQEFVLRVVPLYLMRQYFNFREGRHADWE LKGLVRLFQQLQLVNQAFWQRIHDTCVSDSNLKAFLTFFSLSSSISYSLETQLQKIRP LVMSAEETLG" gene complement(3379815..3381737) /locus_tag="PA3019" /db_xref="GeneID:878861" CDS complement(3379815..3381737) /locus_tag="PA3019" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_251709.1" /db_xref="GeneID:878861" /translation="MTLLKFTDVSLAFGTTPLLDKVSWQIGRGERVCVIGRNGTGKSS LFKVVKGEQQADDGEVWRAPALKIGELPQELPRADERIVFDVVAEGLAEVGKLLAEYH HLSLNIHTDDDLARLSRVQQELEARDGWRLQQLVDSTLSRLQLPADKTLAELSGGWRR RVLLAQALVAEPDLLLLDEPTNHLDIGAIAWLEEALLGFNGAVLFITHDRAFLQSLAT RILELDRGHLIDWNGDYASFLVHKEQQLAAEEAANALFDKRLAQEEVWIRQGIKARRT RNEGRVRALKEMRRERAERRERQGKASFQLESADKSGKQVIVVEHVSFAHPGGQPLVR DFSMVLQRGDRIGLLGANGTGKTTLLKLLLGDLQPTSGKIEVGTKLEVAYFDQLRHQL EPEQTVIDNISEGREFITIDGQNRHVLSYLGDFLFSPQRARTPVKALSGGERARLLLA KLFSKPANLLVLDEPTNDLDVETLELLEEVLLGFQGTVLMVSHDRAFLDNVVTSTLVF EGEGKVREFVGGYQDWLRQGGTPRLLGVSESKSGKAELNTALAPAAEPAPAAAAPSEA PAKKKLSYKLQRELEALPGQIDAVEAELAGVQETIAQQDFYLRPQDEQRETLARLDAL QQELDALLERWAELED" misc_feature complement(3379821..3381737) /locus_tag="PA3019" /note="ABC transporter ATPase component; Reviewed; Region: PRK11147" /db_xref="CDD:236861" protein_bind 3381054..3381066 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3019" /bound_moiety="AmrZ" gene 3381963..3383891 /locus_tag="PA3020" /db_xref="GeneID:878768" CDS 3381963..3383891 /locus_tag="PA3020" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="lytic transglycosylase" /protein_id="NP_251710.1" /db_xref="GeneID:878768" /translation="MRGRLFTLVSCLLLSISFVDAVHAASLTEQRRLYDQAKAALAKG NSAPYMASRSALRDYPLEPYLAYDELTHRLKSASNEEVERFLTEHGDLPQIGWLKLRW LRLLADRGDWKTFVNYYDPKLNFTELDCLYGQYQLGHGQKAEGYATSERLWLVGKSQP AACDTLFGLWQGEGQLTEEKVWKRLKLAAEARNYSLASHLAQRLPTLGNQGALMVSVA QNPAQLSQTGRFSQRDHATADVVGLGLRRLARQDPEKALSLLDYYSSALPFSSDEKVA IAREIGLSLAKRFDPRALPLMTQYDPGLRDNTVTEWRTRLLLRLGRWDEAYALTRKLP QDLAATSRWRYWQARSLQLAQPNSKEPIALYQKLAGERDFYGFLAADRLSVPYKLGNR PAHIDPRVLQRVRNAASTRRAMEFFNRGEVINARREWYHAARLFDRDELIAQARLAYD MQWYFPAIRSISQAQYWDDLDIRFPMAHRATLVREAKNRGLHSSWIFAITRQESAFMS DARSGVGATGLMQLMPGTAKETSRKFGIPLASTQQLIVPDVNIRLGAAYLSQVHSQFN GNRVLASAAYNAGPGRVRQWLKDTRHLAFDVWIETIPFDETRQYVQNVLSYAVIYGQK LNAPQPIVDWHERYFDDF" misc_feature 3381972..3383876 /locus_tag="PA3020" /note="lytic murein transglycosylase; Provisional; Region: PRK11619" /db_xref="CDD:183236" gene 3383948..3384334 /locus_tag="PA3021" /db_xref="GeneID:878769" CDS 3383948..3384334 /locus_tag="PA3021" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251711.1" /db_xref="GeneID:878769" /translation="MNKPLATALLATSSLLLADGALAADACGTPRNAFDSVYCRSGEF SQADRELNQQFGTLRKHLNDGQKTLLKKSQIAWIKERDAACSESKDNGYFVNLDCATE KTRQRLDFLRERERECLSTGCVDAKL" misc_feature 3384026..3384286 /locus_tag="PA3021" /note="Uncharacterized conserved protein YecT, DUF1311 family [Function unknown]; Region: YecT; COG3755" /db_xref="CDD:442969" gene complement(3384378..3385184) /locus_tag="PA3022" /db_xref="GeneID:882985" CDS complement(3384378..3385184) /locus_tag="PA3022" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251712.1" /db_xref="GeneID:882985" /translation="MFRLSALYRYPIKSSAAESLERVALDALGVVGDRRWMAVDTETG RFFTQRLLPQLGRIQARWAAPEVLRLNAPGMSELSLEVPAADANLRGVTVWRDTLQAP DAGDAAADWLTRFLGRPTRLVHIPEARARQVDTGYAEPGQKVHFADGFPLLLIGQASL DDLSQRVGRPLEMLRFRPNLVVEGSAAFAEDGWKRIRIGSVEFVVAKPCSRCILTTLD PATGERNEDREPLTTLKTYREKDGAVLFGQNLIALGQGSLEVGMPVEILD" misc_feature complement(3384381..3385184) /locus_tag="PA3022" /note="N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain [Nucleotide transport and metabolism, Defense mechanisms]; Region: YcbX; COG3217" /db_xref="CDD:442450" gene complement(3385287..3386195) /locus_tag="PA3023" /db_xref="GeneID:882986" CDS complement(3385287..3386195) /locus_tag="PA3023" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="lipid kinase" /protein_id="NP_251713.1" /db_xref="GeneID:882986" /translation="MDKDKVLLVLHGKQAGNEEVRAAVAAQREAGRELAVRVTWEDGD ARRIVEEALAAGYATLVAGGGDGTLREVAEALARGRGEASLAILPLGTANDFARAAGI PLEPAAALALLDQTARPIDLGEVNGKLFLNMATGGFGSKVTANTSEDLKKVLGGAAYL LTGLTRFSEVHAAQGRFSAPDFQWEGEFLALGIGNGRQAGGGHVLCPQARVDDGLLDV SILPTPQDMVGTLGTLLGGGNGVESLFVRARVPWLEVEAAEGLDVNLDGEPLEGRKLR FSVSPGALRVHLPAGSPLLREPPRED" misc_feature complement(3385308..3386195) /locus_tag="PA3023" /note="lipid kinase; Reviewed; Region: PRK13054" /db_xref="CDD:237281" gene complement(3386270..3387829) /locus_tag="PA3024" /db_xref="GeneID:879788" CDS complement(3386270..3387829) /locus_tag="PA3024" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="carbohydrate kinase" /protein_id="NP_251714.1" /db_xref="GeneID:879788" /translation="MNDKNYLLAIDNGTQSVRALLFDLQGNLLGKGKVELEAYYSKHP GWAEQDPEYYWAMLGEACRRLWDQVDIDRGLIRGVSLTTQRGTVIHVDAEGRPLRPAI LWLDQRRAEVRERIRGPWGWLFKLVGAEGAVEHFRAQAEVNWVAQEQPEIAAKTDKVL LLSGFLSHRLTGRFVDSVGCCVAYLPFDYKRLRWAAPRDWKWQALAVRREQLPELFKP GERLGEISAEASRHTGIPQGLPLIAAGADKACEVLGAGALEPTIACLSYGTTATINTT RARYLETVPLIPPYPAAIPDHFNTEVMIYRGYWMVSWFKREFGLREMQQAREQGVEPE QLFDELVNGVPPGSMGLTLQPYWSPGIREPGLEAKGAMIGFGDVHTRAHIYRAILEGL AYALRQGKERIEKRSGTPIVRLRVAGGGSQSDAAMQLTADIFGLPAERPHVYEASGLG AAIDCAVGLGLYPDVASAVAGMTRVGRVFLPQAEARQIYQRLYGEVYLRMYRQLRPLY RSIREITGYPA" misc_feature complement(3386363..3387814) /locus_tag="PA3024" /note="nucleotide-binding domain (NBD) of Escherichia coli sugar kinase YgcE and similar proteins; Region: ASKHA_NBD_FGGY_YgcE-like; cd07779" /db_xref="CDD:466798" gene complement(3387850..3389430) /locus_tag="PA3025" /db_xref="GeneID:879789" CDS complement(3387850..3389430) /locus_tag="PA3025" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="FAD-dependent glycerol-3-phosphate dehydrogenase" /protein_id="NP_251715.1" /db_xref="GeneID:879789" /translation="MTSAWNEEWRRRRLPALAGQEWDLIVVGGGISGAGILREAARRG WRCLLLEQRDFAWGTSSRSSKMVHGGLRYIAKGQWRLTRDSVRERQRLLGEAPGLVEP LSFVMAHYRGGFPGPRLFGGLLSVYDALAGRRNHRFYDAAALRYLAPGLKEQRLLGGT RFFDAVTDDARLVLRVLAEARHDGGEAFNGMRVRELLREGGQVVGLRAEDRESGELFD FRCRALALATGAWADELRQPGGSEHIRPLRGSHLLLPAWRLPVAHAFSFMHATDRRPV FVFPWEGATVVGTTDLDHRDGLGEDARISRAELDYLLAACAQQFPAAAIEARDVLSTW AGVRPVVSSGDDSGKPSDEKREHVLWREPGCVTLAGGKLTTFRPLAVEVLQACAPLLG RTVTDDGAAVFGACEGPLIDGLGSGQRRRLAGRYGRDLVRLKRLVDTLGTDCVGASET LWAELAFAAEAEMVLHLDDLLLRRTRLGLLLPGGGAAYLPRIRALCQARLGWDDPRWE REQQAYLDLWRRHYSLPV" misc_feature complement(3387868..3389319) /locus_tag="PA3025" /note="Glycerol-3-phosphate dehydrogenase [Energy production and conversion]; Region: GlpA; COG0578" /db_xref="CDD:440343" gene complement(3389436..3391031) /locus_tag="PA3026" /db_xref="GeneID:879019" CDS complement(3389436..3391031) /locus_tag="PA3026" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251716.1" /db_xref="GeneID:879019" /translation="MRRWNGWGEESTVVELPDSARGFLAELVGQGARLPDASLEAALA KVPASRLEADPRYSIDPRERLLHARGQSLPDWLAMREGDFGVYPDAVAYPETAEQIRE LLALADSRDLQLIPYGGGTSVAGHINPQASRRPVLTVSLERMNRLIDLDRESLVATFG PGAAGPQVESQLRALGYTLGHFPQSWELSTLGGWVASRSSGQQSLRYGRIEQLFAGGT LETFAGPLEIATFPASAAGPDLRELVLGSEGRFGIISSVKVRVSPLAEDERFYSVFLP NWQQALQATRELAQARVPLSMLRLSNAVETMTQLALAGHPGQIAWLEKYLALRGAGEG KCMLTFGVTGNRRQNGLSLSQAKALLKRFGGVFTGTLLGRKWAQNRFRFPYLREALWQ AGYAVDTLETATDWSNVDGLLQKIEASLRDGLAAEGEKVHVFTHLSHVYGEGSSIYTT YVFRPAASYAATLERWKRLKHAASQAIVDNRGTISHQHGVGKDHAPYLPREKGELGVA ALRAMAGHFDPAGRLNRGTLLQD" misc_feature complement(3389445..3390926) /locus_tag="PA3026" /note="FAD/FMN-containing lactate dehydrogenase/glycolate oxidase [Energy production and conversion]; Region: GlcD; COG0277" /db_xref="CDD:440046" gene 3391208..3392239 /locus_tag="PA3027" /db_xref="GeneID:879020" CDS 3391208..3392239 /locus_tag="PA3027" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251717.1" /db_xref="GeneID:879020" /translation="MQTLGSTSVPALLKYLRHAERLGLDIAPALAAAGLQADQLNDNR QRLPGEAHEHLLGYFCEHSGDPLFGLHSARFVQPGSWSVLGYIAMNCATLGEAMSRIT PYEKLVGDMGTSRIEAAGGQVRLIWNCRHQTPLVRRHMVEHVLASWVLYARWIADLEG SPDEVWLEHDLPDGTRVEDYETFFGCPVRFAQPCSALLVPLDYLALPLRQADATLLRT LEEHALALMAELDDDEPLPLRVKNALRQLLKDGLPRKERVAEKFGMTVRTLQRHLQQA GSSYQQTLDELRRELAEHYLLHSELPIQDIAQYLGFTESRSFHRSFKGWTGQTPGEYR QRRKEPAAQ" misc_feature 3391274..3391831 /locus_tag="PA3027" /note="Arabinose-binding domain of AraC transcription regulator, N-term; Region: Arabinose_bd; pfam12625" /db_xref="CDD:432679" misc_feature 3391595..3392230 /locus_tag="PA3027" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" gene complement(3392268..3393485) /gene="moeA2" /locus_tag="PA3028" /db_xref="GeneID:879359" CDS complement(3392268..3393485) /gene="moeA2" /locus_tag="PA3028" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein A" /protein_id="NP_251718.1" /db_xref="GeneID:879359" /translation="MSGCCEQPGLMPVETALERLLELAAQTPIDTCEQVPLEQAGGRV LAVDLLAGLDLPPWPNSAMDGYALRLADWNGEPLPVSQKIFAGQAPKPLQAGTCARIF TGAPLPEGADLVEMQENAEALDDGRVRFTQPLRVGQHVRPRGQEIRQGDLVLPAGTRL RSIELGLAASLGYAALEVRRKPRVALLSTGDELVEAGQPLQAGQIYNSNRPLLKDWLQ RLGCDVLDAGILPDDLARTRERLAGLAGVDLILSTGGVSVGEADFLGMALREAGELTL WKLAIKPGKPLTVGQFQGIPVIGLPGNPASTLVTFALLARPYLLRRLGVAQVAPLRVE VPAGFAWTKAGQRREYLRGRLEQGRAVLYPNQSSGVLRSASWAEGLVEVREGRTLVEG EGVAFIPLSELLD" misc_feature complement(3392277..3393458) /gene="moeA2" /locus_tag="PA3028" /note="Molybdopterin Mo-transferase (molybdopterin biosynthesis) [Coenzyme transport and metabolism]; Region: MoeA; COG0303" /db_xref="CDD:440072" gene complement(3393482..3394021) /gene="moaB2" /locus_tag="PA3029" /db_xref="GeneID:879360" CDS complement(3393482..3394021) /gene="moaB2" /locus_tag="PA3029" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein B" /protein_id="NP_251719.1" /db_xref="GeneID:879360" /translation="MSHKAETAFVPLNIAVLTVSDTRTLETDTSGQLFVDRLTEAGHN LAARVLLKDDLYRIRAQVATWIAEDSVQVVLITGGTGFTGRDSTPEAVACLLDKQVDG FGELFRQISLADIGTSTIQSRALAGLSNGTLVCCLPGSTNACRTAWEGILVEQLDARH RPCNFVPHLKQAAPCESRG" misc_feature complement(3393512..3394000) /gene="moaB2" /locus_tag="PA3029" /note="molybdenum cofactor biosynthesis protein B, proteobacterial; Region: moaB_proteo; TIGR02667" /db_xref="CDD:131715" misc_feature complement(order(3393584..3393586,3393593..3393595, 3393605..3393610,3393689..3393691,3393779..3393787)) /gene="moaB2" /locus_tag="PA3029" /note="MPT binding site [active]" /db_xref="CDD:238451" misc_feature complement(order(3393653..3393655,3393662..3393664, 3393695..3393700,3393707..3393709,3393722..3393730, 3393752..3393754,3393764..3393766,3393770..3393775, 3393779..3393781)) /gene="moaB2" /locus_tag="PA3029" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:238451" gene 3394088..3394684 /gene="mobA" /locus_tag="PA3030" /db_xref="GeneID:882980" CDS 3394088..3394684 /gene="mobA" /locus_tag="PA3030" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="molybdenum cofactor guanylyltransferase" /protein_id="NP_251720.1" /db_xref="GeneID:882980" /translation="MPDSALPPCSILLLAGGRGQRMGGRDKGLIEWQGLPLIAHLHRL VRPLTDDLIVSCNRNQERYAAYADRVVSDDSRDFPGPLAGIRAGLAVARHPWLLVLPC DAPRIDRALLETLLQAAGRTPARPWMLRCGGQWEPLFSLIPTHLAEEIEHAWRQGDRS PRHVLLPLGAEAIELAAGDPRLANLNTPELLANHRELK" misc_feature 3394103..3394678 /gene="mobA" /locus_tag="PA3030" /note="molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed; Region: mobA; PRK00317" /db_xref="CDD:234725" gene 3394816..3395037 /locus_tag="PA3031" /db_xref="GeneID:882981" CDS 3394816..3395037 /locus_tag="PA3031" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251721.1" /db_xref="GeneID:882981" /translation="MIKRMLPALLLAVGLGALAGCSSPTVITLNDGREIQAVDTPSYD EDSGFYEFEQLDGKRARVNKDQVRTVKEL" misc_feature <3394876..3395034 /locus_tag="PA3031" /note="Bacterial protein of unknown function (DUF903); Region: DUF903; cl05512" /db_xref="CDD:471259" gene 3395190..3395266 /locus_tag="PA3031.1" /db_xref="GeneID:3240238" tRNA 3395190..3395266 /locus_tag="PA3031.1" /product="tRNA-Pro" /db_xref="GeneID:3240238" gene complement(3395325..3396728) /gene="snr1" /locus_tag="PA3032" /db_xref="GeneID:878993" CDS complement(3395325..3396728) /gene="snr1" /locus_tag="PA3032" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="cytochrome C Snr1" /protein_id="NP_251722.1" /db_xref="GeneID:878993" /translation="MKTPAWTRHALWVMPLALGLQSAVVAGDEQPSKTSSYSPVVINE DFATIMKRMTANKPSIEQAHKTLLEQRYDLSDRPAKGASMTRGKPLQEGIRVKLPAGT SWEELARLSPEEIRKQGLFPGGFLPLPHPNHAEGGMVFPKFLIDEIKRQESRDLTRFD LDYDLPDHFLPEFPAPMFLTTRPDLGDVSKGKLVTIDNYFELFNGILNPKQLEGLRLL LTAFPQQQFNLTDDRRSEHPSRGVACFDCHANGHTNAATHLAGDVRPQPFRHRIDTPT LRGVNIQRLFGSQRALKTVEDFTEFEQRAAYFDGDPVIATKKGVNVLERGSQVHFMGE FQALLDFPPAPKLDVEGRLDPGKASEQELRGEKLFYGKAACAGCHAPPYFTDNLMHNL KVERFYDPKLVNGVMASADGPIKTFPLRGIKDSPPYLHDDRLLTLEDTVEFFNLVLER KLSAEEKGDLVAYLRTL" misc_feature complement(3395328..>3395654) /gene="snr1" /locus_tag="PA3032" /note="Cytochrome c peroxidase [Posttranslational modification, protein turnover, chaperones]; Region: MauG; COG1858" /db_xref="CDD:441463" protein_bind 3396971..3396983 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3032" /bound_moiety="AmrZ" gene complement(3397096..3397374) /locus_tag="PA3033" /db_xref="GeneID:882976" CDS complement(3397096..3397374) /locus_tag="PA3033" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251723.1" /db_xref="GeneID:882976" /translation="MLPSPRNTAQVLSMPPECQLFGTLGCHLCEVAEAVLMPFVEHGL LVELVDIADDEAWVEHYGLRIPVLRRCDNGAELNWPFEAEQVAAFLSC" misc_feature complement(3397102..3397323) /locus_tag="PA3033" /note="Glutaredoxin-like domain (DUF836); Region: Glrx-like; pfam05768" /db_xref="CDD:399055" gene complement(3397381..3397938) /locus_tag="PA3034" /db_xref="GeneID:882977" CDS complement(3397381..3397938) /locus_tag="PA3034" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251724.1" /db_xref="GeneID:882977" /translation="MTSRKREQLLSTAVDLFYREGYHATGIDRILAESGVAKMTLYKH FRSKDELIMAALEVRRQRTAERMLEAEARLQPRAAILAVFDGLQEFLQDEAFRGCAFI HAAAEFHERSHPIHRQAAEQKAFVEAYFQRQLERLGVRSAALLARQLQYLMEGALVMA HIHGPADQAREARQAAESLLQVAGI" misc_feature complement(3397474..3397929) /locus_tag="PA3034" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene 3398104..3398700 /locus_tag="PA3035" /db_xref="GeneID:882880" CDS 3398104..3398700 /locus_tag="PA3035" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutathione S-transferase" /protein_id="NP_251725.1" /db_xref="GeneID:882880" /translation="MKLHDLALSGNAYKVRLFLSLIGREATLRPVDFLNREHKTQAFL RMNPRGQIPVLEDGELQLGDSHAILVYLARRHADPVWYPLDPVSQGRIAYWLSYSANE VQNGPASARLITRFNLPLDREQTHQRGLEVLRLVDRHLAEHRWLAQGEQPSIADVALY PYLALAPEGGLALDHYPALNAWIARIRALPGYIPMPGL" misc_feature 3398104..3398688 /locus_tag="PA3035" /note="Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]; Region: GstA; COG0625" /db_xref="CDD:440390" gene 3398717..3399649 /locus_tag="PA3036" /db_xref="GeneID:882881" CDS 3398717..3399649 /locus_tag="PA3036" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251726.1" /db_xref="GeneID:882881" /translation="MSPEQSPFHAGELAIQERAGVREQVAGFGSRAIRTFMPDQHREF FALLSLLLVGSLDADGYPSASVLWGPPGFARSPEPTRLRIDNLPQADDPLAANLEAGT RLGILGLEWPTRRRNRMNGRVLARDGKGFTVGVEQSFGNCPKYIQARSHQPVSRIASP ALQGEGLDPRWLSLVSCSDTLFIASQHADPLRGGVDVSHRGGPPGFLRLGADGRLWLP DYAGNRLFNTLGNLLQDPRCGLLFIDFDNGDLLHLHAEAELFWPGSQPSIPWPAGAER LLALRPAGWRWRRGRLPLAFGEPQPSPFLPAGES" misc_feature 3398825..3399085 /locus_tag="PA3036" /note="Pyridoxamine 5'-phosphate oxidase; Region: Putative_PNPOx; pfam01243" /db_xref="CDD:426149" misc_feature 3399215..>3399493 /locus_tag="PA3036" /note="Predicted flavin-nucleotide-binding protein, pyridoxine 5'-phosphate oxidase superfamily [General function prediction only]; Region: COG3576" /db_xref="CDD:442796" gene 3399649..3400515 /locus_tag="PA3037" /db_xref="GeneID:882876" CDS 3399649..3400515 /locus_tag="PA3037" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251727.1" /db_xref="GeneID:882876" /translation="MPFLYRLASLLIALLVLPVQAAEMRVALLRTSGVETLDALTVDG GSWVRRVPLSHTAVLIEHHAATLLFDTGLGRDIDAQFRADMPWWAAPLFAYQKVVPAR DQLDAAGIRVDRILLSHAHWDHASGLVDFPEVPVWAPYEEIAFSRIATPPAAFPSQFR HGVRWQPYSFDPRPFMGFDESLDLFGDGRLVLVPLPGHTPGSVGLFVTLDSGRRLFFS GDTSWRLEGVEGPRQKFFAGRALVDRDPARTLAQLAKIRLLLRSDPRLSVIPAHDARV QAALGYFPHWLE" misc_feature 3399745..3400467 /locus_tag="PA3037" /note="uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain; Region: metallo-hydrolase-like_MBL-fold; cd07730" /db_xref="CDD:293816" misc_feature order(3400003..3400005,3400009..3400011,3400015..3400020, 3400240..3400245,3400306..3400308,3400462..3400464) /locus_tag="PA3037" /note="putative active site [active]" /db_xref="CDD:293816" gene 3400684..3401949 /locus_tag="PA3038" /db_xref="GeneID:882877" CDS 3400684..3401949 /locus_tag="PA3038" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="porin" /protein_id="NP_251728.1" /db_xref="GeneID:882877" /translation="MSMTPIARAVAFAALGSSITVPTLAHAEFIKDSKASIELRNFYF NRDFRQEGASQSKAEEWAQGFLLRYESGYTEGTIGFGVDAIGLLGVKLDSSPDRSGTG LLKRDRETGRAQDDYGEAGITAKLRASKSTLKIGTLTPKLPVIMPNDSRLLPQTFQGG ALNSMEIDGLTLDAGRLKKVNQRDSSDNEDMTITGGGKRNIVVRSGLTSDKFDFAGGS YKWTDNLSTSYHYGKLDNFYKQHYLGLVHTLPIADKQSLKSDIRWARSTDDGSSNVDN KALNAMFTYSLGYHAFGVGYQKMSGDTGFAYINGADPYLVNFIQIGDFANKDEKSWQA RYDYNFAGVGIPGLTFMTRYVKGDNIDLLTTSGEGKEWERDMDIAYVFQSGPLKNLGV KWRNATMRTNYTNDYDENRLIVSYTLPLW" misc_feature 3400762..3401940 /locus_tag="PA3038" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene complement(3402134..3403516) /locus_tag="PA3039" /db_xref="GeneID:882983" CDS complement(3402134..3403516) /locus_tag="PA3039" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_251729.1" /db_xref="GeneID:882983" /translation="MKIKESPGAFHAASGTLRNVCRRKAAVRTTTTASSWCVEGRAWA FLVLSLYARRLPQSMDNLNSAVQVLIHGSNTLFILLGAVMVLAMHAGFAFLEVGTVRL KNQVNALSKILSDFAISALAYFFVGYWIAYGVTFFHPAAALTVDSGYALVKFFFLLTF AAAIPAIISGGIAERARFGPQLCATALIVAFVYPFFEGLVWNGNFGLQEWLKLEFGAP FHDFAGSVVVHALGGWLALAAVLLLGSRNGRYRDGKLVAMAPSSIPFLALGSWILIIG WFGFNVMSAQTLAGVSGLVAVNSLLAMVGGTMASLLIGRNDPGFLHNGPLAGLVAVCA GSDLMHPIGALATGLVAGALFVWAFTATQVRWKIDDVLGVWPLHGLCGVWGGIACGIF GQQALGGLGGVSLASQALGSLLGVTVAFAGGLLVYGLMKALLGIRLSQEEEYYGADLS IHKIGAISHE" misc_feature complement(3402149..3403324) /locus_tag="PA3039" /note="Ammonia channel protein AmtB [Inorganic ion transport and metabolism]; Region: AmtB; COG0004" /db_xref="CDD:439775" protein_bind 3402741..3402753 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3039" /bound_moiety="AmrZ" protein_bind 3402752..3402764 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3039" /bound_moiety="AmrZ" gene 3403812..3404141 /locus_tag="PA3040" /db_xref="GeneID:882984" CDS 3403812..3404141 /locus_tag="PA3040" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251730.1" /db_xref="GeneID:882984" /translation="MPRKTTANAAKDELLAEFQALVADTEKLLQSTADVAGDQAEEIR GKIHDSLKRARDTLRDTKDSLKDNVRERSQAAVDATEVYVGEHPWQSIGIAAGVGFLL GLLVSRR" misc_feature 3403824..3404138 /locus_tag="PA3040" /note="Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family [Translation, ribosomal structure and biogenesis]; Region: ElaB; COG4575" /db_xref="CDD:443632" gene 3404145..3404525 /locus_tag="PA3041" /db_xref="GeneID:882874" CDS 3404145..3404525 /locus_tag="PA3041" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251731.1" /db_xref="GeneID:882874" /translation="MSEGKDPADGRPSLRRFGAAFLGLLHGHVELFGIELQEQKANTL RLLLFAGLALVFALLLLVGLSLLVLIVFWDTNRLAAALGLCLFYVIGSLFCGWRLYQS INDESSPFSATLEELANDRERLLP" misc_feature 3404145..3404522 /locus_tag="PA3041" /note="Uncharacterized membrane protein YqjE [Function unknown]; Region: YqjE; COG5393" /db_xref="CDD:444153" gene 3404539..3404862 /locus_tag="PA3042" /db_xref="GeneID:882875" CDS 3404539..3404862 /locus_tag="PA3042" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251732.1" /db_xref="GeneID:882875" /translation="MSQLPVNATGLSRRELRKAVIRLRLEMQRQQLRRESQLLVQPFR QAQGLGHNLSQQLFGGGNAALWGAGGAALLGVLLGKGGRWQRLLRLGVALAPLLLGLR KQKGR" gene 3404979..3406310 /locus_tag="PA3043" /db_xref="GeneID:882872" CDS 3404979..3406310 /locus_tag="PA3043" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="deoxyguanosinetriphosphate triphosphohydrolase" /protein_id="NP_251733.1" /db_xref="GeneID:882872" /translation="MDWQTLLTRERLGKPVHSNDELGRSAFHKDHDRIIFSGAFRRLG RKTQVHPVSSNDHIHTRLTHSLEVACVGRSLGMRVGEILREELPEWCDPSDLGVIVQS ACLAHDIGNPPFGHSGEDAIRNWFQQAAGRGWLDEMSDAERSDFLHFEGNAQGFRVLT QLEYHQFDGGTRLTYATLGTYLKYPWTSRHAEALGYKKHKFGCYQSELPLLEQITHKL GMPQLDDERWARHPLVYLMEAADDICYGLIDLEDGLEMELLEYSEVEALLLGLVGDDL PDTYRQLGPRDSRRRKLAILRGKAIEHLTNAAARAFVDQQQALLAGQLAGDLVEHMHG PAKLCVQRAKAIAREKIFQDKRKTLHEIGAYTTLEILLNAFCGAALEQYGGHTPSFKN RRILDLLGRNAPDPQWPLYRAFLQVIDFIAGMTDSYATEMAREMTGRSSPS" misc_feature 3404979..3406298 /locus_tag="PA3043" /note="deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional; Region: PRK01096" /db_xref="CDD:234897" gene complement(3406321..3408546) /locus_tag="PA3044" /db_xref="GeneID:882873" CDS complement(3406321..3408546) /locus_tag="PA3044" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_251734.1" /db_xref="GeneID:882873" /translation="MKFQKRSACMLGLLLIFACMAGYAVPARATAGEYSSMLRIPAPD RPGDADVVDEAPLRQAADGLRSPSPSSLVLGLLVACLVCVGCLGWNTVLQLRLRRWQR TEADLSGRLALKQALVDGIPYPVSIRTLDGRLLACNRNYLESLRMTREQARGTLLTDS DWVEGSKARLMHQQCLAVARGGTASFTDMAVRIGGQLLEIHHWVTPYRDRQGRVLGLM NGWIDITERERLARQLREAMRQADEANRAKSVFLATMSHEIRTPMNAVIGILELVLQR LAPEQRERASLEVAYEAAGSLQLLIGDILDVAKIESGHLTLTPERVRLRHVVESVRRM FEGLARQKGLRLVVELDDAPGRDVLIDPLRFKQVLSNLVSNAIKFTERGQVTIRLQER SLDEGRAIVRVDVEDSGIGIAPADQARLFQPFIQVAKGRTVQGGTGLGLAICRKLVDL MGGDVEMHSEPGKGTRVSLDLLLRQCGPKMPESGQDPLAASMEPSRRLHILIADDYPP NRVLLRQQLEFLGHRVAEAEDGQVALELWADERFEVLISDCNMPRLNGYQLARRIRIQ ERCERRAPILILGYTADAEPDEVQRCRDAGMDDCLFKPLGLETLRNYLATSFGRDAAQ PRGLYDAAALSSLGGDRPERLRELLETLLGSNRQDLQRLAILLREGDRTRLAEHAHRI KGAARMIGARTLLEACEALEDACRRSGDGECLQAPGERLRLALEALQEELQEQLAGAA V" misc_feature complement(<3407764..3408243) /locus_tag="PA3044" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature complement(3406363..>3407844) /locus_tag="PA3044" /note="TMAO reductase sytem sensor TorS; Region: TMAO_torS; TIGR02956" /db_xref="CDD:274362" gene complement(3408560..3409183) /locus_tag="PA3045" /db_xref="GeneID:882868" CDS complement(3408560..3409183) /locus_tag="PA3045" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_251735.1" /db_xref="GeneID:882868" /translation="MSRILIVDDHPVIRMAMKMLLEAEGHQIVGDTDNGVDAISLGRE LKPDLVILDIGIPRLDGLEVISRLMVLALPLKILVLTGQSASLFALRSMQAGAAGFVC KQGGLAELVTAVNAVASGYSYFPSSAMRPVQQGAYSDDVELLGRLSDREVSVLQYLSQ GYSNKQISEQMFISNKTVSTYKARLLLKLNAGSLVDLIEFAKRNTLI" misc_feature complement(3408566..3409171) /locus_tag="PA3045" /note="acid-sensing system DNA-binding response regulator EvgA; Region: PRK09958" /db_xref="CDD:182168" gene complement(3409609..3409953) /locus_tag="PA3046" /db_xref="GeneID:882869" CDS complement(3409609..3409953) /locus_tag="PA3046" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251736.1" /db_xref="GeneID:882869" /translation="MATNRSRRLRKKLCVDEFQELGFELNFHYKEGVDADAVNAFMLR FIDQAIEANELTYGGCDEFGFVCLARRGSVNEEQRALIEAWLKQQPELASVEVGALVD AWYPEQPVLPKL" misc_feature complement(3409633..3409953) /locus_tag="PA3046" /note="Uncharacterized conserved protein YggL, DUF469 family [Function unknown]; Region: YggL; COG3171" /db_xref="CDD:442404" gene 3410264..3411694 /locus_tag="PA3047" /db_xref="GeneID:882878" CDS 3410264..3411694 /locus_tag="PA3047" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase" /protein_id="NP_251737.1" /db_xref="GeneID:882878" /translation="MFKSLRTLAFATLLPFALPTLAQVNATLPANVQKALQTNKLTGN DLSLVLIPLDGPGNPTYYNADVSVNPASTMKLFTTYAALEMLGPTYQWKTEFYTDGQL KNGVLNGNLYLKGGGDPKLNMEKLWLLMRDLRANGVTKVTGDLVLDRSYFNIPQLPVF NDDGGDDTKPFLVGPDSLLVNLKSVRMVVRTDGNKVNVQMDPPLANVRIDNQVKMTAP ATCPAWPKLRFSPVTQFDGTTLLATGQIPQGCSAQTYMSLLDHPGYTAGAVRGIWQEL GGSILGKDRQGSVPRNATLIAKAFSPDLVEIIRDINKYSNNTMARQLFLSIGAQFRNS ADGDDAQAAQRVVRQWLARKGITAPRLVMENGSGLSRQERVSAREMAAMLQAAWHSPY AAEYISSLPLAGLDGTMRKRLRRTALVGEAHVKTGTLNTVRALAGFSRDASGHNWVVV AILNSPRPWGASAILDQVLLSLHARK" misc_feature 3410300..3411691 /locus_tag="PA3047" /note="D-alanyl-D-alanine carboxypeptidase [Cell wall/membrane/envelope biogenesis]; Region: DacB; COG2027" /db_xref="CDD:441630" gene complement(3411763..3413940) /locus_tag="PA3048" /db_xref="GeneID:882879" CDS complement(3411763..3413940) /locus_tag="PA3048" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="ribosomal RNA large subunit methyltransferase K/L" /protein_id="NP_251738.1" /db_xref="GeneID:882879" /translation="MADVYELFLTCPKGLESLLLEEAQGLGLDEARAQVSAVRGQGSL EVAYRLCLWSRLANRVLLVLARFPVENAESMYMAVHAVNWEDHLDAGGTLAVEFSGKG SGIDNTHFGALKVKDAIVDNLRERSGRRPSVDKVNPDVRVHLHLDRGQATLSLDLSGH SLHQRGYRLQQGAAPLKENLAAAVLIRAGWPKIAAEGGALADPMCGVGTFLVEAALMA ADIAPNLKRERWGFSSWLGHVPALWRKLHEEAQQRAAAGLARPPLWIRGYEADPRLIQ PACNNIERAGVADWVKIYQGELATFEPRPDKGQTGLVICNPPYGERLGDEASLLYLYQ NLGERLRQSCIGWSAGVFTGAPELGKRMGIRSHKQYAFWNGALACKLLMIQVEPRQFV TGERGERNDEGLARAPSEPARLSEGGQMFANRLQKNLRQLGKWARRDKIECYRLYDAD MPEYALAVDIYGDWVHVQEYAAPKSIDPAKAQARLFDALAAIPQTLGVAQERVVVKRR ERQAGKKQYERQSSEGKFLEVGEGDVRLLVNLTDYLDTGLFLDHRPMRLRIQKEAAGK RFLNLFCYTATATVHAARGGARSTTSVDLSKTYLDWARRNLSLNGFSDKQRLVHGDVM EWLREDDGQYELIFIDPPTFSNSKRMEGVFDVQRDHVELLDLAMARLAPGGVLYFSNN FRKFELDESVQARYAVEEITGETLDPDFARNPKIHRAWRITVR" misc_feature complement(3411772..3413928) /locus_tag="PA3048" /note="bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL; Region: rlmL; PRK11783" /db_xref="CDD:236981" gene 3414401..3414613 /gene="rmf" /locus_tag="PA3049" /db_xref="GeneID:882866" CDS 3414401..3414613 /gene="rmf" /locus_tag="PA3049" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribosome modulation factor" /protein_id="NP_251739.1" /db_xref="GeneID:882866" /translation="MRRLKRDPLERAFLRGYQNGITGKSRDLCPFTHPTTRQSWLNGW REGRGDNWDGLTGTAGLQRLNQLQHV" misc_feature 3414401..3414571 /gene="rmf" /locus_tag="PA3049" /note="Ribosome modulation factor [Translation, ribosomal structure and biogenesis]; Region: Rmf; COG3130" /db_xref="CDD:442364" gene complement(3414701..3415729) /gene="pyrD" /locus_tag="PA3050" /db_xref="GeneID:882867" CDS complement(3414701..3415729) /gene="pyrD" /locus_tag="PA3050" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="dihydroorotate dehydrogenase" /protein_id="NP_251740.1" /db_xref="GeneID:882867" /translation="MYTLARQLLFKLSPETSHELSIDLIGAGGRLGLNRLLTPKPASL PVSVLGLEFPNPVGLAAGLDKNGDAIDGFGQLGFGFIEIGTVTPRPQPGNPRPRLFRL PQANAIINRMGFNNHGVDHLLARVRAAKYRGVLGINIGKNFDTPVERAVDDYLICLDK VYADASYVTVNVSSPNTPGLRSLQFGDSLKQLLEALRQRQEALALRHGRRVPLAIKIA PDMTDEETALVAAALVEAGMDAVIATNTTLGREGVEGLPHGDEAGGLSGAPVREKSTH TVKVLAGELGGRLPIIAAGGITEGAHAAEKIAAGASLVQIYSGFIYKGPALIREAVDA IAALPRRN" misc_feature complement(3414707..3415729) /gene="pyrD" /locus_tag="PA3050" /note="quinone-dependent dihydroorotate dehydrogenase; Region: PRK05286" /db_xref="CDD:235388" gene complement(3415786..3416067) /locus_tag="PA3051" /db_xref="GeneID:882864" CDS complement(3415786..3416067) /locus_tag="PA3051" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251741.1" /db_xref="GeneID:882864" /translation="MTFNRVVCGKLSWFIQAGGSMPSLIMDIALSGERLQAIYGGRAN RVLLRSRDGRRVNLPAHHLRPFIGHDGVHGTFRLDFSEDGRLLALQRLA" misc_feature complement(3415792..3416004) /locus_tag="PA3051" /note="Protein of unknown function (DUF2835); Region: DUF2835; pfam11197" /db_xref="CDD:431718" gene 3416061..3417041 /locus_tag="PA3052" /db_xref="GeneID:882865" CDS 3416061..3417041 /locus_tag="PA3052" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251742.1" /db_xref="GeneID:882865" /translation="MSRPNLCFNGRTVAVPSHPFPRRSPSPRSPPSIMSSNSRSNSTF TGRLSALANRLRLGAARSDGRELRERAAALELPFQPLRRPEPSVWWQAGPPLHTLVDL PRGALSGPVQEDKAEAHAVLKRLVRVSHSTLESVDLKTIEGVCSREILVQAPCPRLED LATAEVCRGVRIISYKDFVKALSLALPRFTNGDSIRLRQAAWHGERLFWAGERQACAF AAAIVYARRRELELKLPAHLERYELEPGALDELEQRYHMLRIPTEAWSEPTFMSLLLD TGLPYARLALFTPETPECLLLPRNDERADALGEGLRAAGAADVVKYLKQL" misc_feature 3416577..3417038 /locus_tag="PA3052" /note="Family of unknown function (DUF6685); Region: DUF6685; pfam20390" /db_xref="CDD:466539" gene 3417113..3418120 /locus_tag="PA3053" /db_xref="GeneID:882862" CDS 3417113..3418120 /locus_tag="PA3053" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_251743.1" /db_xref="GeneID:882862" /translation="MSLPRLSLSLCLALACGPALASQAPVYGERLEGFDYAYPVHYLD FTSQGQPLSMAYLDVAPKKANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQV GFCKSSKPAHYQYSFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVE RLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRW VQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKD AAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALLEGLQTQ P" misc_feature 3417266..3418108 /locus_tag="PA3053" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene 3418288..3420192 /locus_tag="PA3054" /db_xref="GeneID:882863" CDS 3418288..3420192 /locus_tag="PA3054" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251744.1" /db_xref="GeneID:882863" /translation="MFPCLPRSLLAGVLLASALPAHAELPHAPAYIDDSAYPAAARQR ILPPMFEQRLGSLRYLAKPGDPLITQAESSDFQRTSDYRETRAYLEKLVAASSGRIAL RELPERSAEGHPMLLVTASTEADKSAAGLKRSAKPTLLVEAEIHPGEANGKDAMFMLL RDMSAADRPLAGLLEKINLLFIPVVNVDGDLRRSAYGRINQNGPQETGWRVNGRNLNL NRDFTKLDSAEIRNVAWVFNHYELSFFADTHSTDGAMYPYDSSYCHNGNGWSPASSAW MDQVMRKPVYQALESLGHMVHECISLNDNQDPTQGYYPYRTDLARFSNQYGDIRNVPS ILIEQHALHPYKTQVLGNYVMLKAMFEVIGEQAASLRQAIASDRERLLRQKEVILTWK PGEVAETPFVVGDYRYEQSPVTGARTIVWSNRPKTLKLPVTDNGVPDLVVPRPQRFIV PAQWHEVIARIKAHGIRYSTLERPTEIAVTLYRMDDIKLADGFEPDRVQGNRIPGYEG RLLVSGTPKPFQRLLTFPAGSLSIDTAQPLGVLAIDLLQPQSPDSFWSWGFFNSTLVA AEEPEEYVMEPMARKMLAEDPALKAAFDKRLREDKAFAADPQARLQWFYQRTPFYDVN AFVYPVGVVF" misc_feature 3418510..>3418854 /locus_tag="PA3054" /note="M14 family of metallocarboxypeptidases and related proteins; Region: Peptidase_M14_like; cl11393" /db_xref="CDD:472171" misc_feature 3418693..3419343 /locus_tag="PA3054" /note="Peptidase M14-like domain; uncharacterized subgroup; Region: M14-like; cd06241" /db_xref="CDD:349460" misc_feature order(3418723..3418725,3418732..3418734,3418915..3418917, 3418942..3418947,3419032..3419037,3419050..3419052, 3419299..3419301) /locus_tag="PA3054" /note="active site" /db_xref="CDD:349460" gene complement(3420309..3420785) /locus_tag="PA3055" /db_xref="GeneID:882870" CDS complement(3420309..3420785) /locus_tag="PA3055" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251745.1" /db_xref="GeneID:882870" /translation="MVYVVRKRCLFRAGERLFGLRGLTGLNRPQFSEVVGMDPKRLEN IESGRQRMHDEDFEKVCGTFPEFSDWIAYEGSIEPQSIAWKIAEAAQEAAVYLVERNP ELLELHGLDVPAWREKHREILKKVRKRELSPPPEKPPKPRRKRKPRSNLPTPTDGT" misc_feature complement(3420594..3420746) /locus_tag="PA3055" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cd00093" /db_xref="CDD:238045" misc_feature complement(order(3420645..3420647,3420720..3420722, 3420732..3420734)) /locus_tag="PA3055" /note="non-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" misc_feature complement(order(3420648..3420650,3420723..3420725)) /locus_tag="PA3055" /note="salt bridge [active]" /db_xref="CDD:238045" misc_feature complement(order(3420642..3420647,3420657..3420659, 3420666..3420668,3420699..3420704)) /locus_tag="PA3055" /note="sequence-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" gene complement(3420823..3421299) /locus_tag="PA3056" /db_xref="GeneID:882871" CDS complement(3420823..3421299) /locus_tag="PA3056" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251746.1" /db_xref="GeneID:882871" /translation="MVKNRRLFTAGKRLRALRELMGLSRPQFAELVGMTAKRLENIEN ELQRMHDEDFEKVCGTFPEFSDWIAYEGSIEPQSIAWKVADSAQAAAVYLVERNPVLL EQHGIDMQAWRERHREIREALLAAEQAPEAEPAPLEEPPEPRRQRKRKTPASGKGD" misc_feature complement(3421117..3421269) /locus_tag="PA3056" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cd00093" /db_xref="CDD:238045" misc_feature complement(order(3421168..3421170,3421243..3421245, 3421255..3421257)) /locus_tag="PA3056" /note="non-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" misc_feature complement(order(3421171..3421173,3421246..3421248)) /locus_tag="PA3056" /note="salt bridge [active]" /db_xref="CDD:238045" misc_feature complement(order(3421165..3421170,3421180..3421182, 3421189..3421191,3421222..3421227)) /locus_tag="PA3056" /note="sequence-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" gene 3421425..3421655 /locus_tag="PA3057" /db_xref="GeneID:879928" CDS 3421425..3421655 /locus_tag="PA3057" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251747.1" /db_xref="GeneID:879928" /translation="MKVEELPQEGFAECPRYITLMRFAFLTGLSDRPDLLYAWIESGD LPMRTFGTQRLVDMQKLQKRIEEAKKGADSTG" gene complement(3421696..3423066) /gene="pelG" /locus_tag="PA3058" /db_xref="GeneID:879929" CDS complement(3421696..3423066) /gene="pelG" /locus_tag="PA3058" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="pellicle/biofilm biosynthesis Wzx-like polysaccharide transporter PelG" /protein_id="NP_251748.1" /db_xref="GeneID:879929" /translation="MAGIGFELRKILSRDSYTATLRAYLYAGLISSGPWVLSIVSVML IGVLSLGVVVPDVLVRQFLITVTYLMALSLIFTGGLQLFFTRFISDRLFERKHEAILP NLVGVLLLVTLAAGLLSAILLATLFDEPFAYRLLVMANFVVLCNLWLVIIFLSGMKAY KRILLVMFIGYALMVACAYLLRFMQMDGLLLALLIGHASLLFVFLYDILREYPARRMV AFDFLDRRQVFVSLLLTGLCYNLGIWIDKFIFWFNPSTSDLVIGPLRASILYDLPIFL AYLSIIPGMAVFLVRIETDFAEWYERVYEAIRGGETLQHIGLLKEQMILAIRQGLLEI CKVQGLAVVLLFLLAPQLLGWLGISRYYLPLFYIDLIGVSIQVVFMALLNVFFYLDKR RIVLELCVLFVIVNGALTFVSLLLGPSFFGYGFTLSLLVCVLVGLYRLTTALDDLEYE TFMLNR" misc_feature complement(3421699..3423066) /gene="pelG" /locus_tag="PA3058" /note="Uncharacterized membrane protein [Function unknown]; Region: COG4267" /db_xref="CDD:443408" gene complement(3423068..3424591) /gene="pelF" /locus_tag="PA3059" /db_xref="GeneID:879152" CDS complement(3423068..3424591) /gene="pelF" /locus_tag="PA3059" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="pellicle/biofilm biosynthesis glycosyltransferase PelF" /protein_id="NP_251749.1" /db_xref="GeneID:879152" /translation="MTEHTAPTAPVADVCLLLEGTWPYVRGGVSSWVNQLILGLPDLT FSVFFIGGQKDAYGKRHYPIPDNVLHIEEHFLETAWSSPNPQTRQGSSETEKALRDLH RFFHYPETPDVEEGDALLDLLAEGRIGREDFLHSKASWEAITAGYERYCTDPSFVNYF WTLRSMQAPVFMLAEAARRMPRARMLHSISTGYAGLLGCILQRRWGCRYLLSEHGIYT KERKIDLAQANWIAENPDEQLSTGLDAEVSYIRRLWIRFFERVGLLTYRAANPIVALY EGNRQRQVLDGAEPRRTRVIPNGIDLDAWTGALERRPPGIPPVVGLVGRVVPIKDVKT FIRAMRGVVSAMPEAEGWIVGPEEEDPDYASECRSLVASLGLQDKVKFLGFRRIGEVL PQLGLMVLTSISEAQPLVILEAWAAGAPVVSSDVGSCRELIEGADAEDRALGRAGEVV AIADPQATSRAILALLRNPQRWQAAQAVGLQRVERYYTEALMLGRYRGLYREATEIA" misc_feature complement(3423092..3424555) /gene="pelF" /locus_tag="PA3059" /note="GT4 family glycosyltransferase PelF; Region: PelF; NF038011" /db_xref="CDD:411604" gene complement(3424588..3425577) /gene="pelE" /locus_tag="PA3060" /db_xref="GeneID:879153" CDS complement(3424588..3425577) /gene="pelE" /locus_tag="PA3060" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="pellicle/biofilm biosynthesis protein PelE" /protein_id="NP_251750.1" /db_xref="GeneID:879153" /translation="MISKWLFSGAFLFELSSWASVFADLPIGQALALYLFAHGLGSAL LCVGVWLLLPRRYKFPLPWSPLFLFSLAFFVPLIGAVGVAAAVFPALYLPRQRGEQAW QAMGVPELPFRPKEKRLDMMFSDGGLQDVLRHAPDPNQRLTAIFATRRMPGKEAIPIL KLALRDPADDVRLLAYSMLDQKESRINQRIEAALGRLAGATPARRGALHGTLARWYWE LAYLGLAQGSVLEHILEQAREHTDQALRGTPSADLHLLAGRIALEQGRLEDAGRALQA AEEAGIDSAQLAPFRAEVAFFQRRYRDIPRLLAGMPDDMLQRPPFAALARYWT" misc_feature complement(3424654..>3425118) /gene="pelE" /locus_tag="PA3060" /note="Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis]; Region: LapB; COG2956" /db_xref="CDD:442196" gene complement(3425555..3426922) /gene="pelD" /locus_tag="PA3061" /db_xref="GeneID:880405" CDS complement(3425555..3426922) /gene="pelD" /locus_tag="PA3061" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="pellicle/biofilm biosynthesis protein PelD" /protein_id="NP_251751.1" /db_xref="GeneID:880405" /translation="MSAHKDFTLAPRASGSVSWVETLVISALALGLGWWFSPDDPLQV NATFPWVILAPLLLGMRYGFVRGLASAALLVAALFAFRARGVEAYAQVPAAFIVGVLL CAMLVGEFRDIWERRLERLELANEYRQLRLDEFTRAHHILRISHDRLEQRVAGNDQSL RSSLLGLRQLLRELPGDEAPLDALAETVLALLAQYGSLRIAGLYRVRYDRTPEPQPLA TLGEMPALDADDLLVRTCLERGELVSVRQELLERGEQRAHSALQVCVPLVDTDGRILA LLAVEQMPFFVFNERTFSLLAILAGHIADLLQSDRRALQLADIDAQRFSQYLKRSLLD ARDHGLPACLYAFELTDARYGEEVQRLLEGSQRGLDVQLRLRNDEGRRVLLVLLPLTS AEGSQGYLQRLRILFAERFGQARELESLGVRIRQYELDAGNDRQALGHFLFNECGLND QQVAI" misc_feature complement(3425999..3426391) /gene="pelD" /locus_tag="PA3061" /note="GAF domain; Region: GAF_2; pfam13185" /db_xref="CDD:433019" misc_feature complement(3425591..3425962) /gene="pelD" /locus_tag="PA3061" /note="PelD GGDEF domain; Region: PelD_GGDEF; pfam16963" /db_xref="CDD:435678" gene complement(3426928..3427446) /gene="pelC" /locus_tag="PA3062" /db_xref="GeneID:880406" CDS complement(3426928..3427446) /gene="pelC" /locus_tag="PA3062" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="pellicle/biofilm biosynthesis outer membrane protein PelC" /protein_id="NP_251752.1" /db_xref="GeneID:880406" /translation="MQSIRCLALAAVALFMAGCSSFTSESATPLARGAQWGLVPLLNY SQAPQAGERAEQILLSVLAEEGVRPRLYPAQPQGDLQLVDDRERQQRALDWARQQKLA YVVTGSVEEWQYKNGLDGEPAVGVSLQVLEPASGRVLWSTSGARAGWSRESLAGAAQK VLRELVGDLRLE" misc_feature complement(3426931..>3427191) /gene="pelC" /locus_tag="PA3062" /note="FlgO protein; Region: FlgO; cl41967" /db_xref="CDD:477887" gene complement(3427486..3431067) /gene="pelB" /locus_tag="PA3063" /db_xref="GeneID:878832" CDS complement(3427486..3431067) /gene="pelB" /locus_tag="PA3063" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="pellicle/biofilm biosynthesis protein PelB" /protein_id="NP_251753.1" /db_xref="GeneID:878832" /translation="MANSSAADKHPQARLLNPWALLPVALGVALVLWLTFNSEEVFMP SGDGEPDAVSVNYAELLLQAHPENDALRLTLIDLLVKLGDFEQARHHLARLRGKDRLA TPFYEVELDILGALARPEGMDEEQTRRLLERLRKIEHVSLNDAMLERLARHALALDAP DLAARTFAELAGRDPQGRQRWLDEAARWYLASGEPLPAADIQRQLAEAQTEPAKRLAY LRQAFASLLAGERGEQAALLLDERLDALPEDESTLAWLAQGVRAAEGSQRYDLAERFI RRWRELRPEDHEALAADLRLNMAAGRVERAWEVGQELLALRPEDRTLLADLARLGEWT GNGPRALGFWKQLLAGADDPALREHAWRLSLQMFDFDSAIELLAPIGAQRQMTDEELD ALVYSHETRGTPEEGEAWLRGYVQRYPKQRLAWQRLQQILEHTQQLQEETGVWARMAR HFPLSVKERMQWAETHWNLFDPRQAWKVLAGVDTRAIREPEFWRLRAALAWALEQDDD ARAAYERMLALDIRLNSRDEDQLIALYRDSNPKQALQVLIGSWQRSRDPRRLASALQL AENLHDWPALKSLLAEAEGLPEAQGSPYYWVARARLAEQEGHGDVAERLYREALVRFP GENLVRERLLWFYIDRGRRDSLAPLLAQWHGLALRDSTLWLPFASASLLLERNDQALA WFRLYLKSNPNDWLVQAAYADALDASGYQDKALRLRRLLLRRLDREAVRATPDSFATY LRLLAVAQGPLLAQGEARRAWNGEPAMLQLWFEQFLDQLAATNQEPLKDNWLAWARGR GLKIGRNEEIQAALRSQNRAALQRLLERGELDPAQRVEALVRLGHGGEALGEALGALG DGHSRDNREQLRRQAAEILERTPQGLQLGWNKRDFGGLDFKGPTLRAARHLGDDWYAD LELGSGRYHGDALDSSLLGSERNARLTLRRELADGFAAATLDGSWRDDEDRHGLGVLR NWRLSSRDELEAGLDWHRETDETGLMRALGMRDSLRLGGRHTLSGRDQLSWSLAHNRF STRQGDDLGNGEALSLEWAHTLFFDGPAWQLRGGIDYQRNRLENRVPDDLLAAHGGAL ALDGARSQDLLQDRYGQVYLGSTWRRGFPGALNRSRPQYTWIVDTLAGWQWTEKEFNY GIDLGIGMELLGDDELAFTFGYQSAPQGGGGDAGGTLGVTYSTRFGR" misc_feature complement(3429937..3430704) /gene="pelB" /locus_tag="PA3063" /note="Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis]; Region: LapB; COG2956" /db_xref="CDD:442196" misc_feature complement(3428926..3429729) /gene="pelB" /locus_tag="PA3063" /note="Tetratricopeptide repeat; Region: TPR_15; pfam13429" /db_xref="CDD:433199" misc_feature complement(<3427843..>3428346) /gene="pelB" /locus_tag="PA3063" /note="Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism]; Region: FepA; COG4771" /db_xref="CDD:443803" gene complement(3431045..3433891) /gene="pelA" /locus_tag="PA3064" /db_xref="GeneID:878833" CDS complement(3431045..3433891) /gene="pelA" /locus_tag="PA3064" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251754.1" /db_xref="GeneID:878833" /translation="MRFSKKGIAVLRLPSRRNILRPIECPLAWLAGLALALCAGTAAG AAGGPSSVAFWYAERPPLAELSQFDWVVLEAAHLKPADVGYLKEQGSTPFAYLSVGEF DGDAAAIADSGLARGKSAVRNQAWNSQVMDLAAPSWRAHLLKRAAELRKQGYAGLFLD TLDSFQLQAEERREGQRRALASFLAQLHRQEPGLKLFFNRGFEVLPELPGVASAVAVE SIHAGWDAAAGQYREVPQDDRDWLKGHLDALRAQGMPIVAIDYLPPERRDEARALAAR LRSEGYVPFVSTPALDYLGVSDVEVQPRRIALLYDPREGDLTLSPGHVYLGGLLEYLG YRVDYLPTDQPLPERPLSGLYAGVVTWMTSGPPLASDAFDNWIAARLDEKVPVAFLAG LPTENDGLLQRLGIRRLSQKLKVKPSTETHDQALLGSFEAPLVIRIRDLPALTVLDPA RVTPALKLKGDGKEYVPVATADWGGFALAPYVLEEGSEHRRWILDPFAFLRKALRLVP LPSPDATTENGRRIATVHIDGDGFVSRAEVPGSPYAGQQVLEDFIKPYPFLTSVSVIE GEVGPKGMYPHLARELEPIARRIFADDKVEVASHTFSHPFFWQPQLAEQGENFEAQYG YKMAIPGYDKVDFVREVIGARDYIEQRLTTPRKPVKMIFWSGDALPDAATIKLAYDAG LMNVNGGNTALTRAFPSLTGLYPLIRPTRGGVQYYAPIINENVYTNLWQGPYYGFRGV IDTFALTDSPRRLRGLHLYYHFYSGTKQASIRTMHQIYAAMQAEHPLSLWMSDYIPRL EGLHRASLAKRADGSWQLRGFAALRTVRLDPALGWPDLGRSTGVAGVRDLPQGRYVHL SAANARLVLRDSRDPRPALEEANLPLKHWRYRDDGRVEFAFAGHLPLRLVVRAAGDCR LSAAGKAFPGKAGNGLWTFELPMEQVRDGQLVCR" misc_feature complement(3432974..3433711) /gene="pelA" /locus_tag="PA3064" /note="Predicted glycosyl hydrolase, GH114 family [Carbohydrate transport and metabolism]; Region: COG3868" /db_xref="CDD:443077" misc_feature complement(3431540..3432340) /gene="pelA" /locus_tag="PA3064" /note="C-terminal Putative NodB-like catalytic domain of PelA-like uncharacterized hypothetical proteins found in bacteria; Region: CE4_PelA_like_C; cd10922" /db_xref="CDD:200548" misc_feature complement(order(3431741..3431743,3431924..3431932, 3432080..3432082,3432092..3432094,3432305..3432310)) /gene="pelA" /locus_tag="PA3064" /note="putative active site [active]" /db_xref="CDD:200548" protein_bind 3431450..3431462 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="'Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3064, PA3060, PA3061, PA3062, PA3063, PA3059, PA3058'" /bound_moiety="AmrZ" protein_bind complement(3434011..3434029) /experiment="Beta-gal reporter assay [PMID: 22581773]" /experiment="DNAse footprinting [PMID: 22581773]" /experiment="Site directed mutagenesis [PMID: 22581773]" /note="Transcription factor binding site for NP_249788.; Evidence of regulation for: PA3064" /bound_moiety="FleQ" protein_bind complement(3434064..3434082) /experiment="Beta-gal reporter assay [PMID: 22581773]" /experiment="DNAse footprinting [PMID: 22581773]" /experiment="Site directed mutagenesis [PMID: 22581773]" /note="Transcription factor binding site for NP_249788.; Evidence of regulation for: PA3064" /bound_moiety="FleQ" gene complement(3434373..3435359) /locus_tag="PA3065" /db_xref="GeneID:879844" CDS complement(3434373..3435359) /locus_tag="PA3065" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251755.1" /db_xref="GeneID:879844" /translation="MCASLTRLFDGRAMGRALAVSLPLFVLYSASGDANWLLANIATI SVAVVVERVGSAPLAALGQGVAIILGFLGLSFALAWGAAFAIACAALAAAAVALSGLD TRLRTLGNFVFIPVLYLACEVAATHRAALSLVPYLVVATLPSVALAGVDTLRHAALAR RYGTLLRWRGAHLTGHAAAHDELLQAVLAVTLAVASSATLVAWRHIEYGQWAIWSSAS VVTGNAASAHLKLRDRGLGALLGVPLGLAVGAALPHVLLVHTLATLASVLTLVGFRHY ATGFAARCACIACASWAIQQSPLVASLRVAEVLAGGAIGVASVWLVRFLARN" misc_feature complement(3434409..3434771) /locus_tag="PA3065" /note="Fusaric acid resistance protein-like; Region: FUSC_2; pfam13515" /db_xref="CDD:433273" gene complement(3435372..3435944) /locus_tag="PA3066" /db_xref="GeneID:879845" CDS complement(3435372..3435944) /locus_tag="PA3066" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251756.1" /db_xref="GeneID:879845" /translation="MNTALIGLDYIVDIMHPDGRIARCAEQAALRGVVARFNRALAVA EQRGWLRIAVRVGFEPGYPDLPEHSPIFAAAQALGALDLCGRGCAFHPDLKRDAVQME VLKPRISAFYATRLEAVLRARRIERLVLAGVSTTWAVQAAARDAHDRDYQVLVLEEAC AAASDEEHRRSIEVLGGIARIVTLDQLAAL" misc_feature complement(3435420..3435935) /locus_tag="PA3066" /note="Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It...; Region: cysteine_hydrolases; cd00431" /db_xref="CDD:238245" misc_feature complement(order(3435531..3435533,3435630..3435632, 3435918..3435920)) /locus_tag="PA3066" /note="catalytic triad [active]" /db_xref="CDD:238245" misc_feature complement(3435543..3435548) /locus_tag="PA3066" /note="conserved cis-peptide bond [active]" /db_xref="CDD:238245" gene complement(3435987..3436430) /locus_tag="PA3067" /db_xref="GeneID:878663" CDS complement(3435987..3436430) /locus_tag="PA3067" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251757.1" /db_xref="GeneID:878663" /translation="MPTNQDLQLAAHLRSQVTTLTRRLRREAQADPVQFSQLVVLGAI DRLGGDVTPSELAAAERMRSSNLAALLRELERGGLIVRHADPQDGRRTRVSLSSEGRR NLYGNRAKREEWLVRAMHACLDESERALLAAAGPLLTRLAQFEEP" misc_feature complement(3436047..3436427) /locus_tag="PA3067" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" gene complement(3436578..3441440) /gene="gdhB" /locus_tag="PA3068" /db_xref="GeneID:878664" CDS complement(3436578..3441440) /gene="gdhB" /locus_tag="PA3068" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NAD-specific glutamate dehydrogenase" /protein_id="NP_251758.1" /db_xref="GeneID:878664" /translation="MAFFTAASKADFQHQLQTALAQHLGDKALPQVTLFAEQFFSLIS LDELTQRRLSDLVGCTLSAWRLLERFDRDQPEVRVYNPDYEKHGWQSTHTAVEVLHPD LPFLVDSVRMELNRRGYSIHTLQTNVLSVRRSAKGELKEILPKGSQGKDVSQESLMYL EIDRCAHAGELRALEKAILEVLGEVRVTVADFEPMKAKARELLTWLGKAKLKVPAEEL KEVRSYLEWLLDNHFTFLGYEEFSVADEADGGRMVYDEKSFLGLTRLLRAGLSKDDLH IEDYAVAYLREPVLLSFAKAAHPSRVHRPAYPDYVSIRELDGKGRVIRECRFMGLFTS SVYNESVNDIPFIRGKVAEVMRRSGFDTKAHLGKELAQVLEVLPRDDLFQTPVDELFS TALAIVRIQERNKIRVFLRKDPYGRFCYCLAYVPRDVYSTETRLKIQQVLMERLQASD CEFWTFFSESVLARVQFILRVDPKSRIDIDPARLEEEVIQACRSWQDDYSSLVVENLG EAKGTNVLADFPKGFPAGYRERFAPHFAVVDLQHLLSLSEQRPLVMSFYQPLAQGEQQ LHCKLYHADTPLALSDVLPILENLGLRVLGEFPYRLRHQNGREYWIHDFAFTYAEGLD VDIQQLNEILQDAFVHIVSGDAENDAFNRLVLTANLPWRDVALLRAYARYLKQIRLGF DLGYIASALNAHTDIARELVRLFKTRFYLARKLTAEDLEDKQQKLEQAILGALDEVQV LNEDRILRRYLDLIKATLRTNFYQPDGNGQNKSYFSFKFNPKAIPELPRPVPKYEIFV YSPRVEGVHLRGGKVARGGLRWSDREEDFRTEVLGLVKAQQVKNAVIVPVGAKGGFVP RRLPLGGSRDEIQAEAIACYRIFISGLLDITDNLKEGEVVPPANVVRHDEDDPYLVVA ADKGTATFSDIANGIAAEYGFWLGDAFASGGSAGYDHKGMGITAKGAWVSVQRHFRER GIDVQKDNISVIGIGDMAGDVFGNGLLMSDKLQLVAAFNHMHIFIDPNPDAASSFVER QRLFNLPRSSWADYDAKLISAGGGIFLRSAKSIAITPEMKARFDIQADRLAPTELIHA LLKAPVDLLWNGGIGTYVKSSKETHADVGDKANDGLRVDGRELRAKVVGEGGNLGMTQ LARVEFGLHGGANNTDFIDNAGGVDCSDHEVNIKILLNEVVQAGDMTEKQRNALLVKM TDAVGALVLGNNYKQTQALSLAQRRARERIAEYKRLMGDLEARGKLDRALEFLPSDEE LAERISAGQGLTRAELSVLISYSKIDLKESLLKSLVPDDDYLTRDMETAFPALLAEKF GDAMRRHRLKREIVSTQIANDLVNHMGITFVQRLKESTGMSAANVAGAYVIVRDVFHL PHWFRQIENLDYQVPADIQLTLMDELMRLGRRATRWFLRSRRNELDAARDVAHFGPRI AALGLKLNELLEGPTRELWQARYQTYVDAGVPELLARMVAGTSHLYTLLPIIEASDVT GQDTAEVAKAYFAVGSALDLTWYLQQITNLPVENNWQALAREAFRDDLDWQQRAITVS VLQMQDGPKEVEARVGLWLEQHLPLVERWRAMLVELRAASGTDYAMYAVANRELMDLA QSSQHGVCIP" misc_feature complement(3436611..3441428) /gene="gdhB" /locus_tag="PA3068" /note="NAD-specific glutamate dehydrogenase [Amino acid transport and metabolism]; Region: Gdh2; COG2902" /db_xref="CDD:442147" gene complement(3441713..3442483) /locus_tag="PA3069" /db_xref="GeneID:878738" CDS complement(3441713..3442483) /locus_tag="PA3069" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251759.2" /db_xref="GeneID:878738" /translation="MPGLARRKGEGRARRGWRRWVGGLLLLLGALASGCSNAPRNAAG EDTSQGSMRAGEFLQTDADRMATLAMRDNLQSLYQLLWKLYKRNPAEWKKTGLPSQAD AELAIRRAIEQNRELSDLGGRRDIAALSYSLDPAFKGDRVGAFIYSLASMLITAHGGR TEFYVYQGIDAQYVYNAARNVEVATWMLATRKDDKGAPLLLSNALTDDASNLSYAREF AKIVARLDLLAEVLGERYRRISVNYAQGLLFMHFLPVQ" gene 3442823..3443803 /locus_tag="PA3070" /db_xref="GeneID:878739" CDS 3442823..3443803 /locus_tag="PA3070" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251760.1" /db_xref="GeneID:878739" /translation="MSNEPESTQHKSALQGLKGYLSSQILGQEKLVDRLLIALLADGH LLVEGAPGLAKTKAIKDLAEGLEAEFHRIQFTPDLLPADITGTEIYRPETGTFVFQQG PIFHHLVLADEINRAPAKVQSALLEAMAERQVSVGRSTYDLPQLFLVMATQNPIEQEG TYPLPEAQLDRFLMHVKIGYPEASVERRILQQARGEALNGEARPERRVTQETIFAARQ EILGLYMADAVEEYLVQLIMATRTPAKHDAELAEWISYGASPRGSIALDRCARAHAWL GGRDFVSPEDIQAVLFDVLRHRLILTFEAEAAGIDQDRVVQRILDVVAVA" misc_feature 3442871..3443764 /locus_tag="PA3070" /note="MoxR-like ATPase [General function prediction only]; Region: MoxR; COG0714" /db_xref="CDD:440478" gene 3443814..3444752 /locus_tag="PA3071" /db_xref="GeneID:878808" CDS 3443814..3444752 /locus_tag="PA3071" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251761.1" /db_xref="GeneID:878808" /translation="MLSAAPGVELGLDELLEMRHRLHEARLFSSQNRRSPLVGLHHSR LRGRGVDFDQVRIYQPGDDVRTIDWRVTARTREPHTKLFHEERERPVFVLVEQSQRLF FGSGLCFKAVLAARAAAFIGWSALAHNDRIGGLVFSDRDCHEIKPRRSKHSLLQLFNQ LLRANRELRETPAERPGELFGLALRRAREVLRPGSLILVLCDERTLNDVAEQQLSLIA RHTDLVLLPLSDPLDHALPAAGLLRFREGAADLELDTHADELRQAYRELAEARRARWQ RLAQRLGVPLLPLSTQEDLVEQLRDLLEQHQPGYRA" misc_feature <3443868..3444479 /locus_tag="PA3071" /note="Uncharacterized conserved protein, DUF58 family, contains vWF domain [Function unknown]; Region: YeaD2; COG1721" /db_xref="CDD:441327" misc_feature <3444555..>3444743 /locus_tag="PA3071" /note="Protein adenylyltransferase SelO; Region: SelO; cl19499" /db_xref="CDD:473176" gene 3444749..3445243 /locus_tag="PA3072" /db_xref="GeneID:878809" CDS 3444749..3445243 /locus_tag="PA3072" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251762.1" /db_xref="GeneID:878809" /translation="MNPLDRLEPLIAPLPVGWWPPAPGWWLLAALLPLLGWGLWRLRR HLPRRTIATRGEAPLDPLREAALAELAALAKPYGRASAGPWLQAINGLLKRVCRARWP DSGSHALSGRAWLAFLDNRCPAAGLTRWMILVEGGYRADCTLDDKAVDGLDAAVATWI RKHV" misc_feature 3444761..3445234 /locus_tag="PA3072" /note="Domain of unknown function (DUF4381); Region: DUF4381; pfam14316" /db_xref="CDD:433862" gene 3445236..3446258 /locus_tag="PA3073" /db_xref="GeneID:879108" CDS 3445236..3446258 /locus_tag="PA3073" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251763.1" /db_xref="GeneID:879108" /translation="MFEFAWPWVFAFAPLPWLLRLVLPAADSGEAALKVSFLDELESL AGRRARARLPAWRQQVRFALLWFLLLLAAARPQWVGDPLPLPASGRDLLLAVDVSGSM DYRDMRWQDDEISRLELIKKLFGDFIEDRRGDRVGLILFGSQAYLQAPLTFDRHTVRV WLDEAQIGIAGKNTAIGDAIGLAVKRLRQRPAESRVLVLITDGANTGGQIAPQIAAQL AAEQQVKIYTIGIGADPQQGGVPGLFGFNPGLDLDEPTLRGIAESTGGEYFRARSSAE LESISATLDRLEPVAQQTTRARPALALYSWPLAAALGLSVLLVALELWPRENRTWPRR RSGRQP" misc_feature 3445500..3446066 /locus_tag="PA3073" /note="VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b...; Region: vWA_BatA_type; cd01467" /db_xref="CDD:238744" misc_feature order(3445524..3445526,3445530..3445532,3445536..3445538, 3445755..3445757,3445839..3445841) /locus_tag="PA3073" /note="metal ion-dependent adhesion site (MIDAS); other site" /db_xref="CDD:238744" gene 3446255..3448015 /locus_tag="PA3074" /db_xref="GeneID:879109" CDS 3446255..3448015 /locus_tag="PA3074" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251764.1" /db_xref="GeneID:879109" /translation="MNLLLDAWPHWLRPYWLLLAPLLGWLLWKLLHRQRRAGRWQLLL PTAFQPWLLVGGAGRQNRMPWICLGIAWLLALLALLGPSWQQLEQPSMKRSDPLVAIL QLTPGMLAGDLSPTRLEQARRKLLDLLRTRNDAQTAIVVYAGSAHTLVPLSDDQLTAR NLLDALKPSIMPEPGQRADLAVRQALDLLEQGAQGRGRLLLLTSELSEPERQGIRSAL EHRAARLAVLGVGTPKGAPVQQEDGSFLKDDQGGILLPRLDESGLRRFAAEIGAGYQR LRPNDRDLDSLGLLARGGTLEEDRENALLRLQRWADQGYWLLLPLLLLAACAGRRGWL FCLPLLMLSLPQPAMAFQFEDLWLRPDQQGQRLLQRGQADEAAKRFEDFRWKGLSLYQ ARDYAAAAQAFAQGDQADDHYNRGNALARQGELEAAVDAYEQALERQPQLVAAQRNKA LVEELLRQRQEQAAQQQAGENKEQRQEASQQSPPSGSSQRPPRDAATVDAQKAQAAAP STSLPEDEGEKTAGAPGQAQPQPDAEDERTGDEEADDGLDDERRQALEQWLRQIPDDP AELLRRKFWYQQQQRQEATP" misc_feature 3446576..3446848 /locus_tag="PA3074" /note="von Willebrand factor type A domain; Region: VWA_2; pfam13519" /db_xref="CDD:463909" misc_feature 3447014..>3447610 /locus_tag="PA3074" /note="Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]; Region: Spy; COG3914" /db_xref="CDD:443119" misc_feature <3447488..3447775 /locus_tag="PA3074" /note="Tetratricopeptide (TPR) repeat [General function prediction only]; Region: TPR; COG0457" /db_xref="CDD:440225" misc_feature 3447488..3447565 /locus_tag="PA3074" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" gene 3448012..3449643 /locus_tag="PA3075" /db_xref="GeneID:878347" CDS 3448012..3449643 /locus_tag="PA3075" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251765.1" /db_xref="GeneID:878347" /translation="MIRLFCSLLLALLCVSAHASFSASVDRARLTEGESVELTLESDD PTLFGKPDLSPLDALFEVLGTRQVNRLATQNGRAQATTRWIVTLLPKQSGYVAIPPIS LGASSTQPIRLHVLEARDRAKSSKLAPVFIDASVDQETVYVQAQAILTLRIYHSVSLY DDSSLTPLAMNDAKVEQLGEARTYEKEINGIRHGVIEVRYAIFPQKSGTLEIPAQAFS ATLVDRGSDDYNPFGPRPGRQMRVTSPSIPLQVRPKPADYPADAPWMPARALSISESW SPQPEQAQVGESLTRNVLLKVEGLSGTQLPPLPLPDVQGLRRYPDQPQLADQSTDQGL IGSREEREALVPEQAGRIELPALEVVWWNTREDRLERTSLPPRTLEVAAAPQAEAEPP AAALPLGERLEPTLWPWQLATAVLALTTLLGFGLWWRARQLPAVIRAAANGPSSRSLL DELRRACLANDPQATRQALDAWARQQPDTLADMAARFVPLSDALDGLNGALYSESGHS WQGEDLWRAIRALPTTEQAPAGAVDNGGLPPLYPR" misc_feature 3448078..3448356 /locus_tag="PA3075" /note="BatD DUF11 like domain; Region: BatD; pfam13584" /db_xref="CDD:463927" misc_feature <3448705..3449610 /locus_tag="PA3075" /note="Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]; Region: PksD; COG3321" /db_xref="CDD:442550" misc_feature <3449230..3449508 /locus_tag="PA3075" /note="cysteinyl-tRNA synthetase; Provisional; Region: PRK12418" /db_xref="CDD:183518" gene 3449697..3450776 /locus_tag="PA3076" /db_xref="GeneID:878348" CDS 3449697..3450776 /locus_tag="PA3076" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251766.1" /db_xref="GeneID:878348" /translation="MRFRTLYLVLCGLLLGHAATAAEPPTAPTPPTQPAEGPGGADYR HASVHQWHFGEGAREYWVFTPEQPVPGNAPLVIFLHGWSVMQPDLYRAWIDHIVRRGM VVVYPRYQPDLKTPNAAFLDNAAGALGDALRRLQAGELGVRPRLNQVAYLGHSAGGLL AANLAAASERLKLPAAKALMVVEPGKSQGKRWDGVAQERLSGLAKGTLLLAVCGDEDS HVACTDAKRIYRQSRHIPPSDKNLLLLRSDRHGAPPLLANHAAPTAPVFGPQYPKEED SDWLLDRVEKRLEVQQAEGRYTGHDPLVIDALDWYGTWKLFDGLTDAAFYNRNRQYAL GATPEQTGMGQWSDGTPVKPIKVLK" misc_feature 3449880..>3450161 /locus_tag="PA3076" /note="A functionally diverse superfamily containing proteases, lipases, peroxidases, esterases, epoxide hydrolases and dehalogenases. The catalytic apparatus typically involves three residues (catalytic triad): a serine, a glutamate or aspartate and a...; Region: alpha/beta hydrolases; cl21494" /db_xref="CDD:473884" gene 3450838..3451509 /locus_tag="PA3077" /db_xref="GeneID:882974" CDS 3450838..3451509 /locus_tag="PA3077" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_251767.1" /db_xref="GeneID:882974" /translation="MHIHVLVVEDNFDLAGTVIDYLEAAGVVCDHARDGQAGLNLARA NRYDVILLDIMLPRINGRQVCRQLREAGLQTPVLMLTALDTLQDKLDGFDAGADDYLL KPFELPELLVRLQALSRRRSGQAQRLQVDDLVMDLDSRQASRGGTPLALSPTAWKILE CLMRASPALVTREQLGRSVWGDEPPESNTLNVHMHHLRSTVDKGFATPLIHTLHSVGF QLERK" misc_feature 3450847..3451473 /locus_tag="PA3077" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" gene 3451506..3452801 /locus_tag="PA3078" /db_xref="GeneID:882975" CDS 3451506..3452801 /locus_tag="PA3078" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_251768.1" /db_xref="GeneID:882975" /translation="MKRGLSLIPIVGGGVTLILAGVLLVYTRMLGDYGETGALYLLSM MMEEEGLYFAQRYQEDPATPAPDSYYFKGSVGTAGLPPKLREMLDTPPYKSIGAMQLL GNWDDDDEEEDDDAPSDDAYVVVRQPLADGKTLYLYDNDAAGSIDTPLSDAIIDARVR QTWIVTLSVTLPSLAAVGLLVWFIVAPLRKLTRWSMTLDDLAPDSQRPRFNYRELNVL ADTLWNSVTRIKDFSQREERFLRYASHELRTPLAVIGMNLELLDQPGRAPSPHALQRI RRSALGMQQMTETLLWLSRESGELRDDGHIEVGRLLEELLEEQQALSQRRGLTFHLDV EPHSLPQTRARIIIGNLLRNALQYSDEGVVEIVVRDRSLLISNPIGAAQGTEESMAFG YGLGLDLVQRLCQKSGWRLHYSSDEQRFRCELLFPATPD" misc_feature 3451890..3452792 /locus_tag="PA3078" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: BaeS; COG0642" /db_xref="CDD:440407" gene complement(3452872..3455253) /locus_tag="PA3079" /db_xref="GeneID:882959" CDS complement(3452872..3455253) /locus_tag="PA3079" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251769.1" /db_xref="GeneID:882959" /translation="MSAMNQHQQNKASLLERLIFNNRPVVIFLCVLVSVFLFYQATQV RPSTSFEKMIPLEHPFIQKMLEHRNDLANLGNTVRISVEAVNGDIFTKEYMETLRQIH DEVFYIPGVDRSGLKSLWSPSVRWTEVTEEGFAGGEVIPQTYDGSPRALEELRNNVLK SGQIGRLVANNFKSSIVDVPLLEMYPNPKNQSELIKLDYRQFSHELEEKIRDKYQLQN PNVKVHIVGFAKKVGDLIDGLVMVVGFFGICLLITLVLLYWFTKCIRSTIAVLITTLV AVLWQLGLLNLVGFGLDPYSMLVPFLIFAIGISHGVQKINGIALQSSGADNALMAARL TFRQLFLPGMIAILADAVGFITLLVIDIGVIRELAIGASIGVAVIVFTNLILLPVAIS YIGISKKAVQRSKDDAVREHPFWRLLSNFSSPKVAPVSIAIALLMLGGGLWYGKHLKI GDLDQGAPELRPDSRYNLDNDFIIRNYSTSSDVLVVMVKTSPEGCSTHQALAAMDELA WKLENTEGVQSAISMVTVSKQVIKGMNEGNLKWETLSRNQDVLNNSIARADGLYNTDC SLAPLLVFLNDHKAETLDRAVAAVQAFAAENDKDDLQFQLAAGNAGIEAATNEVIKQS ELIILVLVYICVAAMCMITFRSFAATLCIVLPLILTSVLGNALMAALGIGVKVATLPV IALGVGIGVDYGIYIYTRLESFLRMGLPLQEAYYETLRSTGKAVLFTGLCLAIGVATW IFSAIKFQADMGLMLTFMLLWNMFGALWLLPALARFLINPAKLQARKASLFAH" misc_feature complement(3452923..3455211) /locus_tag="PA3079" /note="Predicted exporter protein, RND superfamily [General function prediction only]; Region: MMPL; COG1033" /db_xref="CDD:440656" gene complement(3455266..3456363) /locus_tag="PA3080" /db_xref="GeneID:882960" CDS complement(3455266..3456363) /locus_tag="PA3080" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251770.1" /db_xref="GeneID:882960" /translation="MREPMTWRTSPGQTADASRHPAIPSRSPLASRALSFLGALSLLT FAATPVLAESTPTAAPPQFAVESPKAASSLLLSVAHAGKRLVAVGDRGHILLSDDDGK TWTQAKVPTRQLLTSVFFVNERKGWAVGHDAQILVSDDAGSTWARQFEDLGREAPLLD IWFADEQHGLAVGAYGALLETRDGGQHWEDVSERLDNEDQFHLNAIAAVKDNGLLVVG EAGSLFRSKDWGATWEKLEGPYEGSLFGAIGTADAGGVLVYGLRGHLFRSADFGDSWE EIPLKAASGDLEFGLSDGALLADGRIVVVGHGGSVLESTDGGRSFSVFNRPDRLSLAG VSATGDGHLILVGQGGVHLAAANGAALEQQQ" misc_feature complement(3455665..3456120) /locus_tag="PA3080" /note="Uncharacterized conserved protein related to plant photosystem II stability/assembly factor [General function prediction only]; Region: COG4447" /db_xref="CDD:443546" misc_feature complement(3455407..3455874) /locus_tag="PA3080" /note="Uncharacterized conserved protein related to plant photosystem II stability/assembly factor [General function prediction only]; Region: COG4447" /db_xref="CDD:443546" gene complement(3456543..3457910) /locus_tag="PA3081" /db_xref="GeneID:882949" CDS complement(3456543..3457910) /locus_tag="PA3081" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251771.1" /db_xref="GeneID:882949" /translation="MLNKHLLIGASLALALGSGGALAGVSAGEAAQLKSSLTPLGAEK AGNAAGSIPAWTGGITQAPAGYKPGQHHPDPFAADKPLFTIDKANLEQYREHLTPGQL ALFKTYPDSFRMPVYPSRRSGSAPQWLYDNTFANATSARLLDGGNGFADAYGGVPFPI PKSGVEALWNHVARYRGTYVVRRASEVAVQRNGSYSLVTSQQEALFKYYLKGGSFADL NNLMFYYLSFTKSPARLAGGAVLVHETLDQVKEPRQAWGYNAGQRRVRRAPNLAYDTP IAAADGLRTADDTDMFNGAPDRYDWKLLGKKEIYIPYNNYKVSSPEVKYEELLKPGHL DPQYTRYELHRVWVVEGTLKPGARHIYSKRTLYLDEDSWSAAVVDQYDGRGELWRVSM AYLKNFYDLPYTWSALDVFHDLQARRYHVQNLDNEEPGTIDFTQAIPDDSYFKPSALR RRGTR" misc_feature complement(3456561..3457661) /locus_tag="PA3081" /note="Protein of unknown function (DUF1329); Region: DUF1329; pfam07044" /db_xref="CDD:429261" gene complement(3457969..3459933) /gene="gbt" /locus_tag="PA3082" /db_xref="GeneID:882950" CDS complement(3457969..3459933) /gene="gbt" /locus_tag="PA3082" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glycine betaine transmethylase" /protein_id="NP_251772.1" /db_xref="GeneID:882950" /translation="MYIPNRQPRLRSAPARAGFAFAGLLPLLGGQAQAVEFSFLDNEV SGSLDTTLSYGTLWRVQGQDKSNNDINTNDGNRNFDTGLVSEVYKITSDLEATWRNYG VFIRGTAFYDTQIMDKRNDYYSHNDPSQPSQSYPHDDRFTSQTRDIAGHKAEILDAYV YGSWDIGNMPLSARFGRQVFNWGEGIFYRGGVNTTNPVDAAKYRLPGSELKEVLMPVE ALSFNIGLTDNLSMETFYQWNWKETRLDPVGTFFSETDLFADGGNTGYSDFTGTALDT PVPGFGNVIGLYQALGNNPLLSGALKNTGLYANGVTPAYGNVMKVSSIGKDINARNDG QFGVAFRYIAEELNSTEFGFYFVNYHSKEPTLYADIGDYAGADLAALANTLRPIAGNL AEALANGLVTADVMGNINARREFAEDIRMYGFSFNTTVGDASVFGELAYRPNLPIGIA ATNDLIGDLAHGAAEAANGGQINVGGQMVGLGGQIHNYERVEAFNTSLGTIYNFGPSL SFDSLTGVAELASEHLRGSSLKYTAYDGSTRYYAGRGNSSYVSGGDRGDQVNRNAYGY TLLLSGTWNDVFAGVNVSPYVVYKDDFEGNSYQTGNFIEGRKAYTLGIKATYLNSLEG ELQYTEFYGGGQNNNIRDRDNIGLTVKYSF" misc_feature complement(3457972..3459891) /gene="gbt" /locus_tag="PA3082" /note="Protein of unknown function (DUF1302); Region: DUF1302; pfam06980" /db_xref="CDD:462059" gene complement(3460380..3463037) /gene="pepN" /locus_tag="PA3083" /db_xref="GeneID:882952" CDS complement(3460380..3463037) /gene="pepN" /locus_tag="PA3083" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aminopeptidase" /protein_id="NP_251773.1" /db_xref="GeneID:882952" /translation="MRTEQPKVIHLKDYQAPDYLIDETHLKFELFEDHSLVHAELKLR RNPERGAGLPPLLLHGQQLELLALELDGQALGADDYQLDDEQLGVQPRQAEFVLRSTV RIHPESNTALEGLYKSGKMFCTQCEAEGFRKITYYLDRPDVMSRFTTTVSAEQQRYPV LLSNGNPVASGSEGNGRHWATWEDPFKKPAYLFALVAGDLWCVEDSFRTMSQRDVALR IYVEPENIDKVQHAMDSLKKSMRWDEEVYGREYDLDIFMIVAVNDFNMGAMENKGLNI FNSSCVLARAETATDAAHQRVEGVVAHEYFHNWSGNRVTCRDWFQLSLKEGFTVFRDS EFSADMNSRTVKRVEDVAFLRTNQFAEDAGPMAHPVRPDSFIEISNFYTLTVYEKGSE VVRMIHTLLGAEGFRKGSDLYFQRHDGQAVTCDDFVKAMEDANGVDLTQFKRWYSQSG TPRLAVEGEYDAAARRYTLTVRQSCPPTPGQPSKEPFVIPLELGLLDGQGHELPLRLE GEAVAQGGNRVLAVTEAEQRFVFVEVPEQPLPSLLRGFSAPVKLSFPYSRDQLLFLMQ HDSDGFNRWEAGQQLSVQVLQELIGQHQRGEQLVLDPRLIEAYRTLLADEALDQAMVA EMLSLPSEAYLTEISEVADVDAIHAAREFARQRIGEALFEPLWQRYQANRKISRDTAY LAEASHIARRSLQNIALSYLSLSGREEILAACLEQYEGCDNMTERLTALAVLVNSGFE AEKGKALAMFADYFKDDPLVMDQWFSVQAGSPLPGGLERVQELMQHPAFTLKNPNKVR ALIGAFANQNLVNFHRPDGAGYRFLADQVIVLNALNPQIASRLLVPLTRWRKYDEARQ ALMRGELERILASGELSSDVYEVVSKSLA" misc_feature complement(3460383..3463037) /gene="pepN" /locus_tag="PA3083" /note="aminopeptidase N; Provisional; Region: pepN; PRK14015" /db_xref="CDD:237585" misc_feature complement(order(3461874..3461879,3461892..3461894, 3461901..3461903,3462060..3462065,3462117..3462119, 3462126..3462131,3462138..3462140,3462228..3462248, 3462657..3462659,3462663..3462665)) /gene="pepN" /locus_tag="PA3083" /note="active site" /db_xref="CDD:341063" gene complement(3463056..3463856) /locus_tag="PA3084" /db_xref="GeneID:882720" CDS complement(3463056..3463856) /locus_tag="PA3084" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251774.1" /db_xref="GeneID:882720" /translation="MTARLESNAPVQYAFRLDDREVAVNPLIGRPLRLEYLGSIFCTH CGRKTKKSFSQGYCYPCFTRLAQCDSCIVSPEKCHYEQGTCREPEWGERFCMTDHVVY LANSSGVKVGITRASQIPTRWIDQGARQALPILRVATRQQSGLVEDLLRSQVADRTNW RAMLKGEAEPVDLAAVREQLFDQCADGLRELQQRFGLQAIQPVIDLDPLEIAYPVEAY PSKVASLDLEKTPIVEGTLRGIKGQYLILDTGVINIRKYTAYQIAVHH" misc_feature complement(3463071..3463772) /locus_tag="PA3084" /note="Protein of unknown function (DUF2797); Region: DUF2797; pfam10977" /db_xref="CDD:431572" gene complement(3463889..3464152) /locus_tag="PA3085" /db_xref="GeneID:882721" CDS complement(3463889..3464152) /locus_tag="PA3085" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251775.1" /db_xref="GeneID:882721" /translation="MSSFNQAIENITPEIYQNLKLAIEIGKWPDGRKLTQEQKELCLQ AVIAWELQNLPEEERTGYMGPQHCSSHSDEPIPNILFKSDSVH" misc_feature complement(<3463952..3464149) /locus_tag="PA3085" /note="Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown]; Region: yeaC; COG3139" /db_xref="CDD:442373" gene complement(3464236..3465096) /locus_tag="PA3086" /db_xref="GeneID:882728" CDS complement(3464236..3465096) /locus_tag="PA3086" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251776.1" /db_xref="GeneID:882728" /translation="MSAVQVLKFPLSVDLAGFVGLLRRLNVPHRVSEESGQQVLWVPD ERLAEQVRELYRRYPEGDPQATLEAAPRPAGQGFVRQLRMSPMTAAVLLLTFVVAAVT YLGDNFATMRWLTFQDFRIQGQYALFTPLAESLAAGQWWRLFTPMLIHFGWLHLAMNA MWFWELGRRIEFRQGRPMLLGLTLLFGLVSNVVQYAVSGASLFGGLSGVLYGLLGHCW IFQYLAPNQAYRLPRGVVAMMLIWLLVCLSGVIDLLGFGSIANGAHVGGLLVGCLSGL LGGLLARRRR" misc_feature complement(3464302..3465045) /locus_tag="PA3086" /note="rhomboid family protease GlpG; Region: rhombo_GlpG; TIGR04239" /db_xref="CDD:275075" gene complement(3465093..3466073) /locus_tag="PA3087" /db_xref="GeneID:882729" CDS complement(3465093..3466073) /locus_tag="PA3087" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251777.1" /db_xref="GeneID:882729" /translation="MQLDPGRGYDLIGDVHGCAHTLDRLLDLLGYRLQGGVWRHPRRQ ALFLGDIVDRGPRIREALHRVHAMVDAGEALCIMGNHEFNALGWSTPAAPGSGRQYVR EHTPRHARLIKETLEQFEGHDADWRDFLGWFQQLPLFLDAGRFRMVHACWDGELIATL RRQFPDGRISEAFLQESAEPGSFADLACNRLLRGTDMRLPHGATLTSSDGYTRAFFRT KFWVEDEAPRTYGDIVFQPDALPEAIAREPLSEEQKSSLLTYGADEPLLFVGHYWRRG TPAPIRPNLACLDYSAVMYGKLAAYRLDEETRLDRHKFVWVEVKRPEADE" misc_feature complement(3465147..3466049) /locus_tag="PA3087" /note="Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain; Region: MPP_PA3087; cd07413" /db_xref="CDD:277358" misc_feature complement(order(3465261..3465263,3465414..3465416, 3465627..3465629,3465831..3465836,3465912..3465914, 3465924..3465926,3466026..3466028,3466032..3466034)) /locus_tag="PA3087" /note="active site" /db_xref="CDD:277358" misc_feature complement(order(3465261..3465263,3465627..3465629, 3465834..3465836,3465924..3465926,3466026..3466028, 3466032..3466034)) /locus_tag="PA3087" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:277358" gene complement(3466073..3466960) /locus_tag="PA3088" /db_xref="GeneID:882736" CDS complement(3466073..3466960) /locus_tag="PA3088" /EC_number="2.7.1.23" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="NAD kinase" /protein_id="NP_251778.1" /db_xref="GeneID:882736" /translation="MEPFRNIGIIGRLGSTQVLDTIRRLKKFLIDRHLHVILEDTIAE VLPGHGLQTCSRKIMGEICDLVVVVGGDGSMLGAARALARHKVPVLGINRGSLGFLTD IRPDELEAKVGEVLDGQYIVESRFLLDAQVRRGIDSMGQGDALNDVVLHPGKSTRMIE FELYIDGQFVCSQKADGLIVATPTGSTAYALSAGGPIMHPKLDAIVIVPMYPHMLSSR PIVVDGNSELKIVVSPNMQIYPQVSCDGQNHFTCAPGDTVTISKKPQKLRLIHPIDHN YYEICRTKLGWGSRLGGGD" misc_feature complement(3466076..3466960) /locus_tag="PA3088" /note="NAD(+) kinase; Region: ppnK; PRK01231" /db_xref="CDD:179257" gene 3467085..3468050 /locus_tag="PA3089" /db_xref="GeneID:882737" CDS 3467085..3468050 /locus_tag="PA3089" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251779.1" /db_xref="GeneID:882737" /translation="MTLLTELLDELRHPAVRDLAWTLLAPPLLRRTPEPQRHPLAASR WRQEPERLAAWLREQERQPQHLAAWLAQWPRQRLGLYYEHLWQFALEQAPDVRLIAAN LPVRDGGHTLGELDLLLRDDDGIHHLELAIKLYLGPQSGPGDWLGPGGQDRLSRKLEH LCRHQLPLAATREGRQVLAAHGAESAVSALWLSGYLFHPWPGPGSLPADIEPRHLRGR WLRQRDWPAYLASLAGPQTGQHWLHLSREHWLAPAMRRQDPLDPPRDGACWNIAFADE ARPQMLVRVVPRDGYWVEAERLFLASDDWPPGLSLWGSARQAADA" misc_feature 3467133..3467984 /locus_tag="PA3089" /note="Domain of unknown function (DUF1853); Region: DUF1853; pfam08907" /db_xref="CDD:430306" gene complement(3468051..3468950) /locus_tag="PA3089a" /db_xref="GeneID:17373370" CDS complement(3468051..3468950) /locus_tag="PA3089a" /codon_start=1 /transl_table=11 /product="1-aminocyclopropane-1-carboxylate deaminase" /protein_id="YP_008719763.1" /db_xref="GeneID:17373370" /translation="MQRLELDWLQRAGVELALLRLDQADPLISGNKGFKLAPHLALAR EQGLDGLISLGGAHSNHLHALAGAGARFGFRCVGLLRGHEVDTPTVRDLRSLGMELHW LGYGGYRQRHAAGFWLPWRERYPGLLPVAEGGGGLLGARGCIGLVERIATQLPTLGWD DYDAIWVAAGTGTTLAGLVLGEAGRHPVVGALAVPEDHGVAAQVAATLAEAGWADTGY RLLDASRGGFARLDGRLARFIVEFETASGVALEPLYTGKLLLALREAVESGAVARGSR LVALHSGGLQGRRALQERLLALL" misc_feature complement(3468072..3468938) /locus_tag="PA3089a" /note="1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family [Amino acid transport and metabolism]; Region: Acd; COG2515" /db_xref="CDD:442005" gene complement(3468988..3470427) /locus_tag="PA3091" /db_xref="GeneID:882747" CDS complement(3468988..3470427) /locus_tag="PA3091" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251781.1" /db_xref="GeneID:882747" /translation="MRAASPGVRGLAMSMQKKPQMAEAVLFFNDSGVCKEMLYPEFEA LLDGLVRMPEYADRQMHLAYVLINPRLQARAAVFFYLDFDEQGGADTGWNLPLRNLAE RAGRGPDMGGGPIRLACRSQCPVSWHQMHLWDPESSAGRNHFVLIRDALRRNQLGLLV DEEPAAVEPQRLQMAAEEQWYAAGPAAPKAPPAEPPRKQEDEQTARLAQLVKQQRQQL AALARQQEQRLAGLARQHEEELARREQDARGQLDILRSEVLSLQQALERQARENAELQ QRLLEQGEQFQRNREELTRQLRFIENQGRNETDLLRSEFADELEARVAAAVAGYKEQV SIRDVELAYRNELDQQLEQELAELRAERDRLAAQGPEQLLERLSGQGVVFVAYHPGAG HLTIPLQDIPRYQDNPLAYAAAKCFVSESQYRQWLDHFQQPRCEALLPGGERCNLPLD RVDNPARFVAGDTNCCARHKTTGRLRTVS" misc_feature complement(<3469288..>3469839) /locus_tag="PA3091" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" gene complement(3470764..3472803) /gene="fadH1" /locus_tag="PA3092" /db_xref="GeneID:879829" CDS complement(3470764..3472803) /gene="fadH1" /locus_tag="PA3092" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2,4-dienoyl-CoA reductase" /protein_id="NP_251782.1" /db_xref="GeneID:879829" /translation="MTAAVPYPHLLAPLDLGFTTLRNRTLMGSMHTGLEEKPQGFERM AAYFAERARGGVGLMVTGGIGPNEEGGVYSGAAKLSTPEEAEKHRIVTQAVHEAGGKI CMQILHAGRYAYSPKQVAPSAIQAPINPFKPKELDEEGIEKQIADFVNCASLAQVAGY DGVEIMGSEGYFINQFLVQHTNQRTDRWGGSYENRMRLPVEIVRRVREAVGPNFIIIY RLSMLDLVEGGSSWDEIVLLAKAVEKAGATLINTGIGWHEARIPTIATKVPRAAFTKV TAKLRGEVGIPLITTNRINTPEVAEKVLAEGDADMVSMARPFLADPDFVNKAAAGHAE RINTCIGCNQACLDHTFGGKLTSCLVNPRACHETELNYIPTTRPKKIAVVGAGPAGLA AATVAAERGHRVSLFDAAGEIGGQFNVAKRVPGKEEFHETLRYFRNKLESTGVELHLN RRVGVDDLVAGGYDEIVLATGIVPRTPAIPGIEHPKVISYLDAILERKPVGGKVAVIG AGGIGFDVSEFITHAGPSTSLEREAFWKEWGIDTRLEARGGIAGIKAEVHPAARQVFL LQRKKSKVGDGLGKTTGWIHRAGLKNKQVQMVNAVEYLRIDDAGLHIRVAEGEPQVLP VDTVIVCAGQDPLRELQDGLLAAGQSVHLIGGADVAAELDAKRAINQGSRLAAEL" misc_feature complement(3471718..3472776) /gene="fadH1" /locus_tag="PA3092" /note="2,4-dienoyl-CoA reductase (DCR) FMN-binding domain. DCR in E. coli is an iron-sulfur flavoenzyme which contains FMN, FAD, and a 4Fe-4S cluster. It is also a monomer, unlike that of its eukaryotic counterparts which form homotetramers and lack the...; Region: DCR_FMN; cd02930" /db_xref="CDD:239240" misc_feature complement(order(3471730..3471732,3471766..3471768, 3471778..3471780,3471787..3471789,3471856..3471861, 3472024..3472026,3472033..3472035,3472147..3472149, 3472264..3472266,3472291..3472293,3472297..3472299, 3472489..3472491,3472615..3472617,3472711..3472713, 3472717..3472719)) /gene="fadH1" /locus_tag="PA3092" /note="active site" /db_xref="CDD:239240" misc_feature complement(order(3471856..3471861,3472147..3472149, 3472489..3472491,3472615..3472617,3472711..3472713, 3472717..3472719)) /gene="fadH1" /locus_tag="PA3092" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:239240" misc_feature complement(order(3472024..3472026,3472033..3472035, 3472264..3472266,3472291..3472293,3472297..3472299)) /gene="fadH1" /locus_tag="PA3092" /note="2,4-decadienoyl-CoA binding site; other site" /db_xref="CDD:239240" misc_feature complement(3472291..3472293) /gene="fadH1" /locus_tag="PA3092" /note="catalytic residue [active]" /db_xref="CDD:239240" misc_feature complement(order(3471730..3471732,3471766..3471768, 3471778..3471780,3471787..3471789)) /gene="fadH1" /locus_tag="PA3092" /note="4Fe-4S cluster binding site [ion binding]; other site" /db_xref="CDD:239240" misc_feature complement(3470872..3471609) /gene="fadH1" /locus_tag="PA3092" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox_2; cl39093" /db_xref="CDD:476868" gene 3473018..3474136 /locus_tag="PA3093" /db_xref="GeneID:879830" CDS 3473018..3474136 /locus_tag="PA3093" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251783.1" /db_xref="GeneID:879830" /translation="MRKLIFLILITLFAAYAGWAERRPVGHYLSDLRSQVSVVQGQPG ERGNLLAVQPELFTPDYQSAERLQLKFHAYLENARRQGLLNERTVVVFPEHVGTWLVA SGEKPEVYAAADWPTAMDWMAASNPLKVARGWITARGDQRLTDTLFRMKAVDMAHDYQ TLFGGLAHDFKVTVVAGSIVLPDPEVEDGELRPGTGQLYNVSLTFGPDGRPLGQPQRK VFPTRHELSYLNNGRGERLQVLDTPAGRLGVLIGTDSWYPDTYATLVEQGVELLAIPA ALNQSGRWQQPWPGFDAELVPGDVRLAPNSLSNAEAWQRLAVGERLLASGARGAAVAF AHSRLWNVTEDGQSLLGSSQGMRQANPGGGAQLVNLWL" misc_feature <3473471..>3473848 /locus_tag="PA3093" /note="Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate [Energy production and conversion]; Region: Nit2; COG0388" /db_xref="CDD:440157" gene 3474133..3475170 /locus_tag="PA3094" /db_xref="GeneID:882761" CDS 3474133..3475170 /locus_tag="PA3094" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251784.1" /db_xref="GeneID:882761" /translation="MSAPRVRLGDLSVGFVQALADALLAAGVEPAPLLEQYGLDQRRL AEPGARLSIPRYMRLGHAAIQLSGDPALGLQMGRLSRLGQMGLAGVSVAQAPNLRAAA RAMIHLEPLYAQNYRGQSSLVEDAGGAWLRFYSISPYNAYNRFVVDSVLAGWISHLGA LARQPLKAERVDIEYPAPPWAERYEAFFGCPVEFGAPTNQLRLSQASLALANAEHCPS TWSQMLELCNRELEQLTRTRSWRERVSRLLGPMLNGREPDLEEVAARLKLPTWTLRRK LAEEGTQFRSILNDTRRDLAMVYIRETDLAFGEIAYLLGFASAEAFQRAFKRWSGQTP GEFRRAQRQSA" misc_feature 3474211..3474762 /locus_tag="PA3094" /note="Arabinose-binding domain of AraC transcription regulator, N-term; Region: Arabinose_bd; pfam12625" /db_xref="CDD:432679" misc_feature 3474898..3475146 /locus_tag="PA3094" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene complement(3475457..3475533) /locus_tag="PA3094.1" /db_xref="GeneID:3240270" tRNA complement(3475457..3475533) /locus_tag="PA3094.1" /product="tRNA-Asp" /db_xref="GeneID:3240270" gene complement(3475648..3475724) /locus_tag="PA3094.2" /db_xref="GeneID:3240257" tRNA complement(3475648..3475724) /locus_tag="PA3094.2" /product="tRNA-Asp" /db_xref="GeneID:3240257" gene complement(3475741..3475816) /locus_tag="PA3094.3" /db_xref="GeneID:3240274" tRNA complement(3475741..3475816) /locus_tag="PA3094.3" /product="tRNA-Val" /db_xref="GeneID:3240274" gene complement(3475956..3476480) /gene="xcpZ" /locus_tag="PA3095" /db_xref="GeneID:882766" CDS complement(3475956..3476480) /gene="xcpZ" /locus_tag="PA3095" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type II secretion system protein M" /protein_id="NP_251785.1" /db_xref="GeneID:882766" /translation="MKVMTQFHERLRAQAETSQLAIRWRGLPARDRLALLWLGAFLLL VVLYLALWRPAERHLQSARQYFTEQRALHAYIQQQAPNVRQADAAAPQAQIDPAALQG MVTASAAQAGLSVERLDNEGEGAVQVALQPAPFAKLLPWLEQLNGQGVQVAEAGLDRQ VDGRVSARLSLRVE" misc_feature complement(3475968..3476429) /gene="xcpZ" /locus_tag="PA3095" /note="Type II secretion system (T2SS), protein M; Region: T2SSM; pfam04612" /db_xref="CDD:428034" gene complement(3476482..3477630) /gene="xcpY" /locus_tag="PA3096" /db_xref="GeneID:882778" CDS complement(3476482..3477630) /gene="xcpY" /locus_tag="PA3096" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type II secretion system protein L" /protein_id="NP_251786.1" /db_xref="GeneID:882778" /translation="MSGVSALFLPPASTAGADGELAVWWVQDGECRRAPFAQALAEIR APWRLYLPVEAVTACAVNLPTQKARWLRQSLPFAVEEQLADDVEQMHLALGPALADGR HRVFAVQRTWLAAWLALAEGAGKAPASLHVDADCLPGEGSCLFWLEERWLLGGSGAVR LACGSEDWPVLRDSCPPPQRAFAAQEVAPLEGVEVQALAGNPHVWLSEQPLGTDLAQA EFAARQQSSQWRRWRPLLGLVGLWLVLQWGFTLVQAWQLQREGDRYAAQSAELYRQLF PEDRKLINLRAQFDQHLADSASSGGEGQLLGLLGQAATVIGGEPTVSVEQLDFSAARG DVALQVRAPGFDVLERLRSRLSESGLAVQLGSASRDGSTVSARLVIGG" misc_feature complement(3476485..3477612) /gene="xcpY" /locus_tag="PA3096" /note="type II secretion system protein L; Region: typeII_sec_gspL; TIGR01709" /db_xref="CDD:273768" gene complement(3477627..3478628) /gene="xcpX" /locus_tag="PA3097" /db_xref="GeneID:882779" CDS complement(3477627..3478628) /gene="xcpX" /locus_tag="PA3097" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type II secretion system protein K" /protein_id="NP_251787.1" /db_xref="GeneID:882779" /translation="MRRGQNGVALITVLLVVAVVTIVCAGLIIRQQLAIRSSANQLHV RQAWHYALGGERLAEAVLRRDLRQGGENTREPVDHLGEAWARPMTPFKLDDGGELRVR IEDPSGRFNLNGLVRKRKVKPDSVKQFRRLLATLGMKEEIVQGLPDRLADWLDADQNP QGEQGAEDNQYLLEAPAYRAANRSFKDVSELRLLKLSEADYRRLLPFVSALPEDAPLN VNTASVPVLAAMFEIDPGQAENIVDARGREGFQSKDDFTKHLTQLGSKTGNVSYAVGT RYFQVISEVSLGDRRQVLVSTLQRGKDGKIRVMARDMGQGGLPIPSTGGDDWKKDER" misc_feature complement(3477705..3478541) /gene="xcpX" /locus_tag="PA3097" /note="Type II secretion system (T2SS), protein K; Region: T2SSK; pfam03934" /db_xref="CDD:427597" gene complement(3478625..3479338) /gene="xcpW" /locus_tag="PA3098" /db_xref="GeneID:882776" CDS complement(3478625..3479338) /gene="xcpW" /locus_tag="PA3098" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type II secretion system protein J" /protein_id="NP_251788.1" /db_xref="GeneID:882776" /translation="MRLQRGFTLLELLIAIAIFALLALATYRMFDSVMQTDQATRVQE QRMRELVRAMGALERDLTQAVERPVRDELGDNRGAFLSEGENDQIVEFTRGGWRNPLG QARSRLQRVRWSLSGETLERRYWLVLDRAQDSKPRVQQVLDGVTALSWRFLDKEHNWQ GHWPTDEGSEEERLESLPLAVEMTLEHRHYGKLVRVWRLLDPPLKQDQPQGQPGGENG ENGEGGVPQPPEGMPGAPE" misc_feature complement(3478739..3479326) /gene="xcpW" /locus_tag="PA3098" /note="Type II secretion system (T2SS), protein J; Region: T2SSJ; cl42010" /db_xref="CDD:455355" gene complement(3479335..3479724) /gene="xcpV" /locus_tag="PA3099" /db_xref="GeneID:882777" CDS complement(3479335..3479724) /gene="xcpV" /locus_tag="PA3099" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type II secretion system protein I" /protein_id="NP_251789.1" /db_xref="GeneID:882777" /translation="MKRARGFTLLEVLVALAIFAMVAASVLSASARSLQNASRLEDKT LAMWIADNRLNELQLEQTPPSSGRNQGELEFAGRRWEWRTQVDSTAEQDMRRVIVWVA AKPLGRERGSIEERAAARLVGFLGSQP" misc_feature complement(3479407..3479709) /gene="xcpV" /locus_tag="PA3099" /note="type II secretion system protein I; Region: gspI; TIGR01707" /db_xref="CDD:273767" gene complement(3479721..3480239) /gene="xcpU" /locus_tag="PA3100" /db_xref="GeneID:882756" CDS complement(3479721..3480239) /gene="xcpU" /locus_tag="PA3100" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type II secretion system protein H" /protein_id="NP_251790.1" /db_xref="GeneID:882756" /translation="MRASRGFTLIELMVVMVIISVLIGLAVLSTGFASTSRELDSEAE RLAGLIGVLTDEAVLDNREYGLRLERDAYQVLRYDEAKARWLPVARDSHRLPEWAELT FELDGQPLVLAGSKGEKEQKKGTDQPQLLILSSGELSPFRLRLAERGPEGRALSLSSD GFRLPRVEVARR" misc_feature complement(3480039..3480239) /gene="xcpU" /locus_tag="PA3100" /note="Type IV pilus assembly protein FimT [Cell motility, Extracellular structures]; Region: FimT; COG4970" /db_xref="CDD:443996" misc_feature complement(3479793..3480236) /gene="xcpU" /locus_tag="PA3100" /note="type II secretion system protein H; Region: typeII_sec_gspH; TIGR01708" /db_xref="CDD:130769" gene complement(3480246..3480692) /gene="xcpT" /locus_tag="PA3101" /db_xref="GeneID:878731" CDS complement(3480246..3480692) /gene="xcpT" /locus_tag="PA3101" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type II secretion system protein G" /protein_id="NP_251791.1" /db_xref="GeneID:878731" /translation="MNQSRPLQRRQQSGFTLIEIMVVVVILGILAALVVPQVMSRPDQ AKVTVAKGDIKAIAAALDMYKLDNFAYPSTQQGLEALVKKPTGNPQPKNWNKDGYLKK LPVDPWGNPYQYLAPGTKGPFDLYSLGADGKEGGSDNDADIGNWDN" misc_feature complement(3480252..3480656) /gene="xcpT" /locus_tag="PA3101" /note="type II secretion system protein G; Region: typeII_sec_gspG; TIGR01710" /db_xref="CDD:130771" gene complement(3480697..3481914) /gene="xcpS" /locus_tag="PA3102" /db_xref="GeneID:878732" CDS complement(3480697..3481914) /gene="xcpS" /locus_tag="PA3102" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type II secretion system protein F" /protein_id="NP_251792.1" /db_xref="GeneID:878732" /translation="MAAFEYLALDPSGRQQKGVLEADSARQVRQLLRERQLAPLDVKP TRTREQSGQGGRLTFARGLSARDLALVTRQLATLVQAALPIEEALRAAAAQSTSQRIQ SMLLAVRAKVLEGHSLAGSLREFPTAFPELYRATVAAGEHAGHLGPVLEQLADYTEQR QQSRQKIQLALLYPVILMVASLAIVGFLLGYVVPDVVRVFIDSGQTLPLLTRVLIGVS DWVKAWGALAFVAAIGGVIGFRYALRKDAFRERWHGFLLRVPLVGRLVRSTDTARFAS TLAILTRSGVPLVEALAIAAEVIANRIIRNEVVKAAQKVREGASLTRSLEATGQFPPM MLHMIASGERSGELDQMLARTARNQENDLAAQIGLMVGLFEPFMLIFMGAVVLVIVLA ILLPILSLNQLVG" misc_feature complement(3480700..3481911) /gene="xcpS" /locus_tag="PA3102" /note="Type II secretory pathway, component PulF [Cell motility, Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: PulF; COG1459" /db_xref="CDD:441068" gene complement(3481914..3483422) /gene="xcpR" /locus_tag="PA3103" /db_xref="GeneID:877804" CDS complement(3481914..3483422) /gene="xcpR" /locus_tag="PA3103" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type II secretion system protein E" /protein_id="NP_251793.1" /db_xref="GeneID:877804" /translation="MMTAPLPDIAAPAAPPRRLPFSFAKRQGLLFLCLEEQYWLACRP QVELAAIAEAQRFAGRRLPLKALGEDAFNQALAASYQHDSSAAMQLAEDLGGSLDLAA LADQVPETEDLMEQEDDAPIIRLINAILGEAIRENASDIHLETFEKRLVVRFRVDGVL REVLEPKRELAALLVSRIKVMARLDIAEKRIPQDGRISLRVGGREVDIRVSTLPSANG ERVVLRLLDKQAGRLNLQHLGMSERDRKLMDETVRKPHGILLVTGPTGSGKTTTLYAS LTTLNDRTRNILTVEDPIEYHLEGIGQTQVNAKVDMTFARGLRAILRQDPDVVMVGEI RDRETAEIAVQASLTGHLVLSTLHTNSAIGAITRLVDMGIEPFLLSSSMLGVLAQRLV RVLCPACKEPYRADEAECALLGVDPAAPPTLHRARGCGECHQHGYRGRTGIYELVVFD DHMRSLIHNESSEQEMTRHARTSGPSIRDDGRRKVLEGVTTVEEVLRVTREE" misc_feature complement(3481920..3483362) /gene="xcpR" /locus_tag="PA3103" /note="Type II secretory pathway ATPase GspE/PulE or T4P pilus assembly pathway ATPase PilB [Cell motility, Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: PulE; COG2804" /db_xref="CDD:442055" protein_bind 3483485..3483500 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA3105, PA3104'" /bound_moiety="LasR" gene 3483642..3484349 /gene="xcpP" /locus_tag="PA3104" /db_xref="GeneID:877805" CDS 3483642..3484349 /gene="xcpP" /locus_tag="PA3104" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type II secretion system protein N" /protein_id="NP_251794.1" /db_xref="GeneID:877805" /translation="MIPRRSSDITIKTRSDVLPFSGASSRWLQRYAPALLAVALIIAM SISLAWQAAGWLRLQRSPVAVAASPVSHESIRSDPTRLARLFGTSAQDPNAPPPATNL DLVLKGSFVQSDPKLSSAIIQRQGDKPHRYAVGGEISDGVKLHAVYRDRVELQRGGRL ESLPFPHRSGGLLASADDITSENDSIEQLQSLQDENAAALRERLDALRQQMEATPIAE PAEEDSSEPTTTPTESD" misc_feature 3483771..3484136 /gene="xcpP" /locus_tag="PA3104" /note="Type II secretion system protein C; Region: T2SSC; pfam11356" /db_xref="CDD:431837" gene 3484354..3486330 /gene="xcpQ" /locus_tag="PA3105" /db_xref="GeneID:880114" CDS 3484354..3486330 /gene="xcpQ" /locus_tag="PA3105" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type II secretion system protein D" /protein_id="NP_251795.1" /db_xref="GeneID:880114" /translation="MSQPLLRALFAPSSRSYVPAVLLSLALGIQAAHAENSGGNAFVP AGNQQEAHWTINLKDADIREFIDQISEITGETFVVDPRVKGQVSVVSKAQLSLSEVYQ LFLSVMSTHGFTVVAQGDQARIVPNAEAKTEAGGGQSAPDRLETRVIQVQQSPVSELI PLIRPLVPQYGHLAAVPSANALIISDRSANIARIEDVIRQLDQKGSHDYSVINLRYGW VMDAAEVLNNAMSRGQAKGAAGAQVIADARTNRLIILGPPQARAKLVQLAQSLDTPTA RSANTRVIRLRHNDAKTLAETLGQISEGMKNNGGQGGEQTGGGRPSNILIRADESTNA LVLLADPDTVNALEDIVRQLDVPRAQVLVEAAIVEISGDIQDAVGVQWAINKGGMGGT KTNFANTGLSIGTLLQSLESNKAPESIPDGAIVGIGSSSFGALVTALSANTKSNLLST PSLLTLDNQKAEILVGQNVPFQTGSYTTNSEGSSNPFTTVERKDIGVSLKVTPHINDG AALRLEIEQEISALLPNAQQRNNTDLITSKRSIKSTILAENGQVIVIGGLIQDDVSQA ESKVPLLGDIPLLGRLFRSTKDTHTKRNLMVFLRPTVVRDSAGLAALSGKKYSDIRVI DGTRGPEGRPSILPTNANQLFDGQAVDLRELMTE" misc_feature 3484516..3486195 /gene="xcpQ" /locus_tag="PA3105" /note="type II secretion system protein D; Region: type_II_gspD; TIGR02517" /db_xref="CDD:274175" gene complement(3486417..3487184) /locus_tag="PA3106" /db_xref="GeneID:880115" CDS complement(3486417..3487184) /locus_tag="PA3106" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_251796.1" /db_xref="GeneID:880115" /translation="MIEPNLRGNGKVALVTGAARGIGLGISAWLIAEGWQVVLADNDR ERGARVAEALGEHAWFVAMDVAQEGQVAMSVAEVLGQFGRLDGLVCNAAIANPRNTPL EALSLGEWTRTLAVNLTGPMLLAKYCTPYLRAHNGAIVNIASTRAHQSEPDSEAYAAS KGGLLALTHALAASLGPDIRVNALSPGWIDTREAAEREAAPLTELDHDQHLVGRVGTV EDVASLVAWLLSEDAGFVTGQEFLVDGGMTRKMIYLD" misc_feature complement(3486420..3487184) /locus_tag="PA3106" /note="SDR family oxidoreductase; Region: PRK05717" /db_xref="CDD:168204" gene complement(3487181..3488392) /gene="metZ" /locus_tag="PA3107" /db_xref="GeneID:880476" CDS complement(3487181..3488392) /gene="metZ" /locus_tag="PA3107" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="O-succinylhomoserine sulfhydrylase" /protein_id="NP_251797.1" /db_xref="GeneID:880476" /translation="MTQDWDAGRLDSDLEGAAFDTLAVRAGQRRTPEGEHGEALFTTS SYVFRTAADAAARFAGEVPGNVYSRYTNPTVRTFEERIAALEGAEQAVATASGMSAIL ALVMSLCSSGDHVLVSRSVFGSTISLFDKYFKRFGIQVDYPPLSDLAAWEAACKPNTK LFFVESPSNPLAELVDIAALAEIAHAKGALLAVDNCFCTPALQQPLKLGADVVIHSAT KYIDGQGRGMGGVVAGRGEQMKEVVGFLRTAGPTLSPFNAWLFLKGLETLRIRMQAHS ASALALAEWLERQPGIERVYYAGLPSHPQHELARRQQSGFGAVVSFDVKGGRDAAWRF IDATRMVSITTNLGDTKTTIAHPATTSHGRLSPEDRARAGIGDSLIRVAVGLEDLDDL KADMARGLAAL" misc_feature complement(3487187..3488356) /gene="metZ" /locus_tag="PA3107" /note="O-succinylhomoserine sulfhydrylase; Validated; Region: PRK08133" /db_xref="CDD:181244" misc_feature complement(order(3487385..3487387,3487622..3487627, 3487631..3487633,3487658..3487660,3487709..3487711, 3487715..3487717,3487739..3487741,3488003..3488005, 3488012..3488014,3488027..3488029,3488096..3488101, 3488105..3488110,3488186..3488188,3488192..3488194, 3488249..3488254,3488258..3488269)) /gene="metZ" /locus_tag="PA3107" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99738" misc_feature complement(order(3487709..3487711,3487736..3487741, 3487745..3487747,3487811..3487813,3487898..3487900, 3488027..3488029,3488099..3488107)) /gene="metZ" /locus_tag="PA3107" /note="substrate-cofactor binding pocket [active]" /db_xref="CDD:99738" misc_feature complement(order(3487736..3487741,3487745..3487747, 3487802..3487804,3487811..3487813,3488027..3488029, 3488099..3488107)) /gene="metZ" /locus_tag="PA3107" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99738" misc_feature complement(3487736..3487738) /gene="metZ" /locus_tag="PA3107" /note="catalytic residue [active]" /db_xref="CDD:99738" gene complement(3488409..3489914) /gene="purF" /locus_tag="PA3108" /db_xref="GeneID:880477" CDS complement(3488409..3489914) /gene="purF" /locus_tag="PA3108" /EC_number="2.4.2.14" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="amidophosphoribosyltransferase" /protein_id="NP_251798.1" /db_xref="GeneID:880477" /translation="MCGIVGIVGKSNVNQALYDALTVLQHRGQDAAGIVTCHDDKLYL RKDNGLVRDVFQQRHMQRLIGSVGIGHVRYPTAGSSSSAEAQPFYVNSPYGITLAHNG NLTNVEQLAKEIYESDLRHVNTNSDSEVLLNVFAHELAVRNKLQPTEEDIFAAVSCVH DRCVGGYAVVAMITGHGIVGFRDPNAIRPIVFGQRHTENGVEYMIASESVALDVLGFT LIRDLAPGEAVYITEEGKLYTRQCAKAPKYAPCIFEHVYLARPDSIMDGISVYKARLR MGEKLADKILRERPDHDIDVVIPIPDTSRTAALELANRLGVKFREGFVKNRYIGRTFI MPGQAARKKSVRQKLNAIELEFRGKNVMLVDDSIVRGTTCKQIIQMAREAGAKNVYFC SAAPAVRYPNVYGIDMPSAHELIAHNRSTEDVSKLIGADWLVYQDLPDLIDAVGGGKI KIDHFDCAVFDGEYVTGDVNEAYLNRIEQARNDATKAKSQAVSAIIDLYND" misc_feature complement(3488472..3489914) /gene="purF" /locus_tag="PA3108" /note="Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]; Region: PurF; COG0034" /db_xref="CDD:439804" gene complement(3490136..3490678) /locus_tag="PA3109" /db_xref="GeneID:879903" CDS complement(3490136..3490678) /locus_tag="PA3109" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251799.1" /db_xref="GeneID:879903" /translation="MAFTWVDWTMVAIIVVSSLISLSRGFVKEALSLLTWIVAGAVAW MFGGALAQHLGEYIQTPSARIIAACALLFIATLLLGALVNYLIGELIRVTGLSGTDRF LGMVFGGARGVLLVVLLVGLLSLAPVQQDPWWQQSVLMPHFLMVADWSKNFILGFAGQ WLPAAPITPPSGIGGLLPSQ" misc_feature complement(3490190..3490672) /locus_tag="PA3109" /note="Colicin V production accessory protein CvpA, regulator of purF expression and biofilm formation [Nucleotide transport and metabolism, Cell wall/membrane/envelope biogenesis]; Region: CvpA; COG1286" /db_xref="CDD:440897" gene complement(3490752..3491411) /locus_tag="PA3110" /db_xref="GeneID:879055" CDS complement(3490752..3491411) /locus_tag="PA3110" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251800.1" /db_xref="GeneID:879055" /translation="MALLERGLKQRIVGALVLIALAVIFLPMLFTREDESRQVVVEAP PRPQSPAMPSVEVQPTEVPELQPGEEGIAPEIVEEGSPAAAGQPSQPIGGLPATPPAT QPPAQAQAPAASLPPSQPQPPAAPPSPPPAEKRLDANNLPQSWSVQLASLSNRARAEE LQKTLRSQGYNAYIRSFDGMNRVFVGPVIQRAEADRLRDQLSKQQKLNGFVVRFQPER G" misc_feature complement(3490773..3491360) /locus_tag="PA3110" /note="Cell division protein FtsN [Cell cycle control, cell division, chromosome partitioning]; Region: FtsN; COG3087" /db_xref="CDD:442321" misc_feature complement(3490767..>3490988) /locus_tag="PA3110" /note="Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning]; Region: DedD; COG3147" /db_xref="CDD:442381" gene complement(3491415..3492704) /gene="folC" /locus_tag="PA3111" /db_xref="GeneID:879056" CDS complement(3491415..3492704) /gene="folC" /locus_tag="PA3111" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="folylpolyglutamate synthetase" /protein_id="NP_251801.1" /db_xref="GeneID:879056" /translation="MTQRSLADWLSYLEQLHPTAIDMGLERSREVARRLGLGRPAKRV VTVTGTNGKGSTCALLAELLREQGLSVGVYSSPHLLRYNERVRIDGIEAGDAQLCDAF SAVEAARGEISLTYFEMGTLAAFWLFERAGLDFAVLEVGLGGRLDAVNLIDADLALIT SIGLDHADWLGDTRESVAFEKAGILRAGKPALCGDLDPPQPLLEQVAALGAPLYLRGR DYDLALADHGWHWRGLAADGQALALHDLPLLGLPMENAALALQAYALLELPWQAERLA EALRRTRVTGRLDRRDLSWNGQPRQLLLDVGHNPQAAQYLAQRLRAAAPRGRYLAVFG LLADKDLDGVLEPLTGLVQDWAVAPLPTPRSRPAAELEAALILRQVPASSHADIAAAL DAQCAKATADDVILLFGSFYSVAEGLEWLARRTDKGE" misc_feature complement(3491436..3492704) /gene="folC" /locus_tag="PA3111" /note="Folylpolyglutamate synthase/Dihydropteroate synthase [Coenzyme transport and metabolism]; Region: FolC; COG0285" /db_xref="CDD:440054" protein_bind 3491487..3491499 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(3492701..3493573) /gene="accD" /locus_tag="PA3112" /db_xref="GeneID:877680" CDS complement(3492701..3493573) /gene="accD" /locus_tag="PA3112" /EC_number="6.4.1.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase carboxyltransferase subunit beta" /protein_id="NP_251802.1" /db_xref="GeneID:877680" /translation="MSNWLVDKLIPSIMRSESQKSSVPEGLWHKCPSCEAVLYRPELE KTLDVCPKCDHHMRINARTRLDIFLDEDGREELGADLEPVDRLKFRDSKKYKDRLAAA QKDTGEKDALIAMSGKLQGMPVVACAFEFSFMGGSMGAIVGERFVRAANVALEKRCPL ICFSASGGARMQEALISLMQMAKTSAVLARLREEGIPFVSVLTDPVYGGVSASLAMLG DVIVGEPKALIGFAGPRVIEQTVREKLPEGFQRSEFLLEHGAIDMIVHRAELRPRLAN LLSAFTHSPSPVSA" misc_feature complement(3492725..3493567) /gene="accD" /locus_tag="PA3112" /note="Acetyl-CoA carboxylase beta subunit [Lipid transport and metabolism]; Region: AccD; COG0777" /db_xref="CDD:440540" gene complement(3493842..3494477) /gene="trpF" /locus_tag="PA3113" /db_xref="GeneID:877681" CDS complement(3493842..3494477) /gene="trpF" /locus_tag="PA3113" /EC_number="5.3.1.24" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="N-(5'-phosphoribosyl)anthranilate isomerase" /protein_id="NP_251803.1" /db_xref="GeneID:877681" /translation="MPAVRIKICGITRVEDALAAAAAGADAIGLVFYAKSPRAVDIHR AREIVRALPPFVTSVGLFVNASRCELGEILDAVPLDLLQFHGDERAEDCEGHRRPYLK ALRMKPGDDIVGRAAAYPGAAGILLDTYVEGVPGGTGAAFDWSLVPTDLGKPLVLAGG LTPDNVGRAVEQVKPYAVDVSGGVEASKGIKDAARVRAFVDAVRSRRRDET" misc_feature complement(3493854..3494474) /gene="trpF" /locus_tag="PA3113" /note="phosphoribosylanthranilate isomerase; Region: PRK01222" /db_xref="CDD:234923" misc_feature complement(order(3493932..3493937,3493941..3493943, 3494094..3494096,3494223..3494225,3494229..3494231, 3494385..3494387,3494451..3494453,3494457..3494459)) /gene="trpF" /locus_tag="PA3113" /note="active site" /db_xref="CDD:238237" gene complement(3494567..3495424) /gene="truA" /locus_tag="PA3114" /db_xref="GeneID:879910" CDS complement(3494567..3495424) /gene="truA" /locus_tag="PA3114" /EC_number="5.4.99.12" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine synthase A" /protein_id="NP_251804.1" /db_xref="GeneID:879910" /translation="MNDVVPPAAAESAAAGVSRIALGIEYKGSRYRGWQRQEAGVPSV QEALERALSKVAAEPVGVICAGRTDAAVHASGQVVHFDTAVERPLKAWVMGTNANLPA DISVTWARVMPAHFHARFSAMARRYRYAIYNDPIRPAHLAEEVTWNHRPLDIGRMREA AQVLVGTHDFTSFRAVQCQAKSPVKTMHHVRLLEHGRLIVLDIRGNAFLHHMVRNIAG VLMTIGAGERPIEWAKEVLEARDRRAGGVTAHPYGLYLVRVEYPGEFELPERYLGPHF LSGLPDIVG" misc_feature complement(3494624..3495370) /gene="truA" /locus_tag="PA3114" /note="tRNA U38,U39,U40 pseudouridine synthase TruA [Translation, ribosomal structure and biogenesis]; Region: TruA; COG0101" /db_xref="CDD:439871" protein_bind complement(3495031..3495043) /gene="truA" /locus_tag="PA3114" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(3495446..3498205) /gene="fimV" /locus_tag="PA3115" /db_xref="GeneID:879911" CDS complement(3495446..3498205) /gene="fimV" /locus_tag="PA3115" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="motility protein FimV" /protein_id="NP_251805.1" /db_xref="GeneID:879911" /translation="MVRLRTLVRAIAAASVLTSGMAHGLGLGEITLKSALNQPLDAEI ELLEVRDLGSGEVIPSLASPEEFSKAGVDRLYYLTDLKFTPVVKPNGKSVIRVTSSKP VQEPYLNFLVQVLWPNGRLLREYTVLLDPPLYSPQAAASAPQAPVSAPRATGAPRAPQ APAPVRTTAPAGSDTYRTVSNDTLWEIAQRNRTDRVSVPQAMLAFQELNPGAFVDGNI NRLKSGQVLRIPTEQQMLERSPREALSQVQAQNQSWRGSRNPAAGSAGARQLDATQRN AAGSAPSKVDATDNLRLVSGEGKASKGADKGGKGDSKAIADTLAVTKESLDSTRRENE ELQSRMQDLQSQLDKLQKLIQLKDAQLAKLQGQLGAEGQGAAQPNAALPDASQPNAAA QAPAQPGTPAAAAPTPAPAGEAPAAPAQPPVAPPPAPAAEKPPAPAVPAPAPVQAAEQ PAPSFLDELLANPLWLAVIGGSALLALLVLLMILSRRNAQKEKEEAQAFAADTGEEQE DALDLGKDGFDDLTLDEPEPQVAAVAPQVEKTTAQTSDALGEADIYIAYGRFNQAAEL LQNAIYDEPQRTDLRLKLMEVYAEMGDREGFARQENELREIGGAQPQVEQLKSRYPAM VAVAAVAGLAGAKLAQDELDSFSLDDLSLDDSGHAAKPDAAGQDLDDAFDLSLDDLGG DDVQADLKSDSGALDDLTLDSDLDLAASTPADKPVDDLDFGLDFAELAETPSQPKHDD LGDFSLDLDAPEDKLSDDDFLLSLNDEVPAAAPADNEFTLDTEAAEEPALSLPDDFDL SLADEPTEPAAPEKGEDSFAAQLDEVSAQLDELASNLDEPKSATPSFSAEDAAVASAL DGDADDDFDFLSGADEAATKLDLARAYIDMGDSEGARDILDEVLAEGNDSQQAEAREL LERLA" misc_feature complement(3496361..3498160) /gene="fimV" /locus_tag="PA3115" /note="Type IV pilus assembly protein FimV [Cell motility, Extracellular structures]; Region: FimV; COG3170" /db_xref="CDD:442403" misc_feature complement(3495452..3495583) /gene="fimV" /locus_tag="PA3115" /note="FimV C-terminal domain; Region: FimV_Cterm; TIGR03504" /db_xref="CDD:274614" gene complement(3498374..3499384) /locus_tag="PA3116" /db_xref="GeneID:882802" CDS complement(3498374..3499384) /locus_tag="PA3116" /EC_number="1.2.1.11" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aspartate-semialdehyde dehydrogenase" /protein_id="NP_251806.1" /db_xref="GeneID:882802" /translation="MSQPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG QRMGFAESSLRVGDVDSFDFSSVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEP SVAPPVMVSVNAERLASQAAPFLLSSPCAVAAELCEVLAPLLATLDCRQLNLTACLSV SSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHSAIERRIFA EVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEPVDLAAVTRVLDATKGIEWVGE GDYPTVVGDALGQDETYVGRVRAGQADPCQVNLWIVSDNVRKGAALNAVLLGELLIKH YL" misc_feature complement(3498377..3499384) /locus_tag="PA3116" /note="aspartate-semialdehyde dehydrogenase; Reviewed; Region: PRK05671" /db_xref="CDD:168165" gene complement(3499486..3500598) /gene="asd" /locus_tag="PA3117" /db_xref="GeneID:882803" CDS complement(3499486..3500598) /gene="asd" /locus_tag="PA3117" /EC_number="1.2.1.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aspartate-semialdehyde dehydrogenase" /protein_id="NP_251807.1" /db_xref="GeneID:882803" /translation="MKRVGLIGWRGMVGSVLMQRMLEERDFDLIEPVFFTTSNVGGQG PEVGKDIAPLKDAYSIDELKTLDVILTCQGGDYTSEVFPKLREAGWQGYWIDAASSLR MEDDAVIVLDPVNRKVIDQALDAGTRNYIGGNCTVSLMLMALGGLFDAGLVEWMSAMT YQAASGAGAQNMRELLKQMGAAHASVADDLANPASAILDIDRKVAETLRSEAFPTEHF GAPLGGSLIPWIDKELPNGQSREEWKAQAETNKILARFKNPIPVDGICVRVGAMRCHS QALTIKLNKDVPLTDIEGLISQHNPWVKLVPNHREVSVRELTPAAVTGTLSVPVGRLR KLNMGSQYLGAFTVGDQLLWGAAEPLRRMLRILLER" misc_feature complement(3499492..3500598) /gene="asd" /locus_tag="PA3117" /note="aspartate-semialdehyde dehydrogenase; Reviewed; Region: PRK06598" /db_xref="CDD:235839" gene complement(3500668..3501750) /gene="leuB" /locus_tag="PA3118" /db_xref="GeneID:882812" CDS complement(3500668..3501750) /gene="leuB" /locus_tag="PA3118" /EC_number="1.1.1.85" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydrogenase" /protein_id="NP_251808.1" /db_xref="GeneID:882812" /translation="MSKQILVLPGDGIGPEIMAEAVKVLELANDRFQLGFELAEDVIG GAAIDKHGVPLADQTLQRARQADAVLLGAVGGPKWDRIERDIRPERGLLKIRSQLGLF ANLRPAILYPQLAAASSLKPEVVAGLDILIVRELTGGIYFGQPREQRVLENGERQAYD TLPYSESEIRRIARVGFDMARVRNNRLCSVDKANVLASSQLWREVVEEVAKDYPDVEL SHMYVDNAAMQLVRAPKQFDVMVTDNMFGDILSDEASMLTGSIGMLPSASLDANNKGM YEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFSQATAADAIEQAVSKVLDQGLRTG DIWSEGCRKVGTREMGDAVVAALKNL" misc_feature complement(3500671..3501750) /gene="leuB" /locus_tag="PA3118" /note="3-isopropylmalate dehydrogenase; Provisional; Region: PRK00772" /db_xref="CDD:234832" gene complement(3501809..3502570) /locus_tag="PA3119" /db_xref="GeneID:882813" CDS complement(3501809..3502570) /locus_tag="PA3119" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251809.2" /db_xref="GeneID:882813" /translation="MSDHDDVVQRQFGAQASAYLSSAVHAQGEEFALLRDALAGRPEA RVLDLGCGAGHVSFQVAALAGEVVAYDLSAEMLAVVAQSAAERGMANIRTEQGKAESL PFADGEFDFVFSRYSTHHWRDVGLALREVRRVLKPGGVAIFVDVAAPGQALPDTFLQT VELLRDTSHVRNYSPAEWARLSGEAGLLVTGSRRQRLRLEFQSWVERMRTPEVFRQAI RSLQLAVGEEVREYFEIADDGSFSTDVLVLWLRRE" misc_feature complement(3502124..3502537) /locus_tag="PA3119" /note="Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Region: UbiE; COG2226" /db_xref="CDD:441828" gene complement(3502642..3503280) /gene="leuD" /locus_tag="PA3120" /db_xref="GeneID:882818" CDS complement(3502642..3503280) /gene="leuD" /locus_tag="PA3120" /EC_number="4.2.1.33" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="isopropylmalate isomerase small subunit" /protein_id="NP_251810.1" /db_xref="GeneID:882818" /translation="MKPYTQTTGLVAPLDRANVDTDQIIPKQFLKSIKRTGFGPNLFD EWRYLDVGQPGQDNSKRPLNPDFVLNQPRYQGASVLLARENFGCGSSREHAPWALDEY GFRTVIAPSYADIFFNNSFKNGLLPIILPEAEVDELFRQVEANEGYQLSIDLAAQTVT RPDGKVLGFEVDPFRKHCLLNGLDDIGLTLQDADAIRAFEDGYRQQQPWLFR" misc_feature complement(3502651..3503280) /gene="leuD" /locus_tag="PA3120" /note="3-isopropylmalate dehydratase small subunit; Region: leuD; PRK01641" /db_xref="CDD:179314" misc_feature complement(3503005..3503013) /gene="leuD" /locus_tag="PA3120" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238809" protein_bind complement(3503046..3503058) /gene="leuD" /locus_tag="PA3120" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(3503292..3504716) /gene="leuC" /locus_tag="PA3121" /db_xref="GeneID:882827" CDS complement(3503292..3504716) /gene="leuC" /locus_tag="PA3121" /EC_number="4.2.1.33" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydratase large subunit" /protein_id="NP_251811.1" /db_xref="GeneID:882827" /translation="MAGKTLYDKLWDMHLVKQRDDGSALIYIDRHILHEVTSPQAFEG LRLAGRKPWRIDANIATPDHNVPTTRTERKGGIAAIADEVSRLQVQTLDENCDDFGIT EFKMNDVRQGIVHVVGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLA TQCLVAKKMKNMLVKVEGRLPAGVTAKDIVLAVIGRIGTAGGNGHAIEFAGSAIRDLS IEGRMTICNMSIEAGARVGLVAVDQKTIDYVKGRPFAPSAEQWDQAVACWQGLVSDAD ARFDTVVELDAAQIKPQVSWGTSPEMVLAVDQNVPDPARESDPIKRGSIERALKYMGL RPNQAITDIQLDRVFIGSCTNSRIEDLRAAAEVARGRKVAATIKQALVVPGSGLVKEQ AEKEGLDRIFIEAGFEWREPGCSMCLAMNPDRLESGEHCASTSNRNFEGRQGAGGRTH LVSPAMAAAAAVNGRFIDVRELLA" misc_feature complement(3503298..3504713) /gene="leuC" /locus_tag="PA3121" /note="3-isopropylmalate dehydratase large subunit; Region: PRK05478" /db_xref="CDD:235490" misc_feature complement(order(3503391..3503393,3503406..3503408, 3503463..3503465,3504312..3504317,3504606..3504608, 3504615..3504617)) /gene="leuC" /locus_tag="PA3121" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:153133" misc_feature complement(order(3503409..3503411,3503463..3503468, 3503475..3503477,3503658..3503660,3504309..3504311)) /gene="leuC" /locus_tag="PA3121" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:153133" gene 3504879..3505772 /locus_tag="PA3122" /db_xref="GeneID:882828" CDS 3504879..3505772 /locus_tag="PA3122" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251812.1" /db_xref="GeneID:882828" /translation="MDLNSLNTFIAIAETGSFSEAGERLHLTQPAVSKRIAALEQQLN ARLFDRVGREVNLTEAGRALLPRAYQLLNVLDDTRRALNNLTGEVSGRLVLATSHHIG LHRLPPLLRAFTRAHPQVALDIQFLDSEVAYEEILHGRAELAVITLAPETAEPVRAVP VWDDPLDFVAAPEHPLARQGTVFLADVAKHPAVFPGGNTFTHHIVRRMFEAEGLTPNI AMSTNYLETIKMMVSIGLAWSVLPRTMLDDQVVRLPLQDIQLSRQLGYILHTERTLSN AARAFMRLLDEQAFGNGTPAA" misc_feature 3504879..3505745 /locus_tag="PA3122" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene complement(3505865..3506242) /locus_tag="PA3123" /db_xref="GeneID:878816" CDS complement(3505865..3506242) /locus_tag="PA3123" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251813.1" /db_xref="GeneID:878816" /translation="MSDDIQRYPSSLPFPFSRAVRAGGFLFLSGQVPMSPSGEVVRGD IQTQTEAVMARIGETLESCGARFDQLVKVTVWLSDMAHFAGFNEVYQRHVQGALPVRS TVTAGLALGVDVEVEVQAWVGEG" misc_feature complement(3505874..3506200) /locus_tag="PA3123" /note="Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family [Defense mechanisms]; Region: RidA; COG0251" /db_xref="CDD:440021" gene complement(3506322..3507233) /locus_tag="PA3124" /db_xref="GeneID:878817" CDS complement(3506322..3507233) /locus_tag="PA3124" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251814.1" /db_xref="GeneID:878817" /translation="MARLEVNRSGELEVFARVVESGGFSAAARRCGMTPSAVSKLITR LEQRLGTRLLNRSTRQLQLTPEGCAFYERGVRILADLEEAERCASENAAPRGRLRVNA NVPFGHHFLLPLVPEFLAQHPEVTLDIVLTDEVVDILEQRTDVAVRAGPLKSSSLVAR KLGSTRMLIVGAPAYLARHGMPATPQALLGHNRLGANYVRTRSGWPLRDAGEELVVPL SGNAQASDGEALRRLAVAGLGLARLAAFQVREDIAAGRLIPVLEAYNPGDLEEVHAVY VGQGGYLPLRVRAFLDFLAERVDMSQG" misc_feature complement(3507033..3507200) /locus_tag="PA3124" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(3506352..3506948) /locus_tag="PA3124" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold; Region: PBP2_CrgA_like_10; cd08480" /db_xref="CDD:176169" misc_feature complement(order(3506418..3506420,3506502..3506504, 3506553..3506555,3506739..3506741,3506745..3506747, 3506787..3506789,3506904..3506906,3506916..3506918)) /locus_tag="PA3124" /note="putative effector binding pocket [active]" /db_xref="CDD:176169" misc_feature complement(order(3506526..3506528,3506535..3506540, 3506559..3506573,3506658..3506660,3506841..3506861, 3506865..3506867,3506877..3506879,3506886..3506891, 3506895..3506900,3506910..3506915)) /locus_tag="PA3124" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176169" gene 3507345..3508673 /locus_tag="PA3125" /db_xref="GeneID:882639" CDS 3507345..3508673 /locus_tag="PA3125" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251815.1" /db_xref="GeneID:882639" /translation="MKRPIERLPAATSSATRAFALTTSLLYACAAPAASWTASWQASP QPVWAEDFLFPSNVPAELHDQTVRQLARISLGGTRVRIVLANTYGRRPIRIGRATLAK PGSERAAVATGSLHDVTFGGRRTATIAPGATLLSDPVAMPVAALSQVLVSLYLPAATP METFHWDGRQTGWIVAGEQTQSHALQLDAADSQSTSARLLLTGILVETETATRTLVTL GDSITDGASASLDRNSRWPDFLAERLVPHGVAVVNAGISGARLLSDGMGASALARLDR DVLAQPGASSMVVMLGINDIAWPGTAFARNAAPPTLEALIAGYRQLIERAHNRGIRVV GATLTPFEGALPGTPLSDYYHPAKEALRRQVNEWIRHAGAFDAVIDFDAALRDPEQPS RLAARYDSGDHLHPSDEGNRAMAAAVDLDVLLDEVPDGTPAEPRADSATK" misc_feature 3507984..3508610 /locus_tag="PA3125" /note="SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases; Region: XynE_like; cd01830" /db_xref="CDD:238868" misc_feature order(3508005..3508007,3508116..3508118,3508224..3508226, 3508548..3508550,3508557..3508559) /locus_tag="PA3125" /note="active site" /db_xref="CDD:238868" misc_feature order(3508005..3508007,3508548..3508550,3508557..3508559) /locus_tag="PA3125" /note="catalytic triad [active]" /db_xref="CDD:238868" misc_feature order(3508005..3508007,3508116..3508118,3508224..3508226) /locus_tag="PA3125" /note="oxyanion hole [active]" /db_xref="CDD:238868" gene complement(3508717..3509166) /gene="ibpA" /locus_tag="PA3126" /db_xref="GeneID:882640" CDS complement(3508717..3509166) /gene="ibpA" /locus_tag="PA3126" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="heat-shock protein IbpA" /protein_id="NP_251816.1" /db_xref="GeneID:882640" /translation="MSNAFSLAPLFRHSVGFDRFNDLFESALRNEAGSTYPPYNVEKH GDDEYRIVIAAAGFQEEDLDLQVERGVLTVSGGKREKSTDNVTYLHQGIAQRAFKLSF RLADHIEVKAASLANGLLNIDLVRLVPEEAKPKRIAINGQRPALDNQ" misc_feature complement(3508789..3509058) /gene="ibpA" /locus_tag="PA3126" /note="Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins. IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation...; Region: ACD_IbpA-B_like; cd06470" /db_xref="CDD:107227" misc_feature complement(order(3508810..3508815,3508867..3508869, 3508996..3509001,3509005..3509007,3509011..3509013, 3509038..3509052)) /gene="ibpA" /locus_tag="PA3126" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:107227" protein_bind complement(3508749..3508761) /gene="ibpA" /locus_tag="PA3126" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3126" /bound_moiety="AmrZ" gene 3509324..3510127 /locus_tag="PA3127" /db_xref="GeneID:882635" CDS 3509324..3510127 /locus_tag="PA3127" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251817.1" /db_xref="GeneID:882635" /translation="MERAIPTFPCRDLDSASAFYQSLGFHLGARYPTYAILQRGALEL HLSLFEALEPKTNCSAAYLRLEDAQALHRQAAALGLGSQGIPRITALEDQPWGMREFA LVDPDGNLLRVGQELDATPEQHRVRLASADDVPAVAALWQANVREAGETLDAGDQQAI QALLLAASRNRLLWLAEAQQHPRGFVLAHLWQIEDGQARVGEIAELYVLPQARRQGLA RELVGSAEEALRSRGAGLIRAQSALDAPLSNLFWQGLGWDADYLTFTRY" misc_feature 3509336..3509668 /locus_tag="PA3127" /note="Bleomycin binding protein (BLMA) and similar proteins; Region: BLMA_like; cd08349" /db_xref="CDD:319937" misc_feature order(3509336..3509344,3509423..3509425,3509444..3509452, 3509456..3509458,3509501..3509518,3509531..3509536, 3509543..3509545,3509660..3509662) /locus_tag="PA3127" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319937" misc_feature order(3509405..3509410,3509423..3509425,3509456..3509458, 3509462..3509467,3509507..3509509,3509606..3509608, 3509627..3509629,3509633..3509635,3509645..3509653, 3509657..3509659) /locus_tag="PA3127" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:319937" misc_feature 3509696..3510094 /locus_tag="PA3127" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" gene 3510144..3510890 /locus_tag="PA3128" /db_xref="GeneID:882636" CDS 3510144..3510890 /locus_tag="PA3128" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_251818.1" /db_xref="GeneID:882636" /translation="MRNVMLITGASRGIGAATALLAAERGYAVVLNYLRNREAAEALR QRIERQGGEALAVAADVAEEGDVERLFASIDERFGRLDVLVNNAGMLEAQTRLENIDA ARLHRVFATNVTGSFLCAREAVKRLSTRHGGRGGSIVNVSSMASRLGSPNEYIDYAAA KGAIDSMTIGLAREVAAEGIRVNAVRPGLIDTEIHASGGEPGRIERLKGGIPLGRGGT AEEVARAILWLASDEASYSTGTFIDVSGGR" misc_feature 3510144..3510887 /locus_tag="PA3128" /note="SDR family oxidoreductase; Region: PRK06123" /db_xref="CDD:180411" misc_feature order(3510168..3510170,3510174..3510185,3510240..3510242, 3510246..3510251,3510318..3510326,3510402..3510410, 3510474..3510476,3510564..3510572,3510612..3510614, 3510624..3510626,3510702..3510713,3510717..3510722) /locus_tag="PA3128" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:212491" misc_feature order(3510477..3510479,3510570..3510572,3510612..3510614, 3510624..3510626) /locus_tag="PA3128" /note="active site" /db_xref="CDD:212491" gene complement(3510905..3511864) /locus_tag="PA3129" /db_xref="GeneID:877973" CDS complement(3510905..3511864) /locus_tag="PA3129" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="tRNA-dihydrouridine synthase C" /protein_id="NP_251819.1" /db_xref="GeneID:877973" /translation="MQIALAPMEGLVDEILRDVLTRVGGIDWCVTEFIRITDRLLPAT AFHKLAPELRDGSRTRAGTPMRVQLLGSDPACLADNAAFACELGAPVIDLNFGCPAKT VNRSRGGAVLLKEPELMHDIVAAVRRAVPSEIAVTSKMRLGYDSPDGALDCARALADG GSAHVVVHARTKVDGYRPPAHWEWVARVAEAVRVPVFANGEVWTLDDYLRCREVSGVE DIMLGRGLVSRPGLARQIAAWRDGGEIREMPWSELLPLLRDFWLQARRKLAPRYAPGR LKQWLGMLTRTYPEAVELFARIRRESDCETIDRLLQVSFSQAA" misc_feature complement(3510932..3511858) /locus_tag="PA3129" /note="tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]; Region: DusA; COG0042" /db_xref="CDD:439812" gene complement(3511957..3512394) /locus_tag="PA3130" /db_xref="GeneID:877974" CDS complement(3511957..3512394) /locus_tag="PA3130" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251820.1" /db_xref="GeneID:877974" /translation="MNWDYADPFVIDLRVLAEDIDGLGHANNAVYVSWLERCAWRHSQ RLGLDLAEYRRLDRAMAVLRHEIDYLAAAYEGDELQLATWIVESDQRLRMNRRFQLVR PADGATLLRAQTTFVCIELSSGKPKRMPAEFIDGYGQALLAGA" misc_feature complement(3511972..3512373) /locus_tag="PA3130" /note="Acyl-CoA thioesterase FadM [Lipid transport and metabolism]; Region: FadM; COG0824" /db_xref="CDD:440586" gene complement(3512394..3513041) /locus_tag="PA3131" /db_xref="GeneID:879952" CDS complement(3512394..3513041) /locus_tag="PA3131" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldolase" /protein_id="NP_251821.1" /db_xref="GeneID:879952" /translation="MTLPLDRVLQQASPVLPVLVIEDVALAPDLARALYAGGVTVLEV TLRTPQALDAIAAIHREVPEVLLGAGTLIHTEQFLEARDAGAQFAVSPGCTPRLAAAA EDAGLPYLPGVMTPSEVLLALEYGYRSLKLFPADGTASVKMLKSLKGPFTGIRFCPTG GVNLDNLLNFLRLPNVACVGGTWLAPPSLIRARAWDQITQLAREARELAGSLEQH" misc_feature complement(3512415..3513026) /locus_tag="PA3131" /note="Entner-Doudoroff aldolase; Region: eda; TIGR01182" /db_xref="CDD:273490" gene complement(3513154..3514011) /locus_tag="PA3132" /db_xref="GeneID:879953" CDS complement(3513154..3514011) /locus_tag="PA3132" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_251822.1" /db_xref="GeneID:879953" /translation="MSSLTWIRGFNGTIGRIAPRWTAERMRRTFMVPGEWPPKDWELP LLASSERVTLRFGLSVLRWGEGPAVLLLHGWAGRPTQFAHLIEQLVGAGYSVYALDAP AHGRSPGREANVVLFAHALLEAAGELPPLRAVVGHSLGGAAALLAAQMGLRSEALVTV SAPSRILEQLRLFARFVGLPALARSHFIRLVERQAGISAACLDVARYRLEMPGLVVHA DDDTRVAVENAERIHAAWPASRLLRLPGGGHHRLLGERRLSESLLALLEERPAMRACR RVEKTASAS" misc_feature complement(3513262..3513840) /locus_tag="PA3132" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene complement(3514023..3514565) /locus_tag="PA3133" /db_xref="GeneID:880097" CDS complement(3514023..3514565) /locus_tag="PA3133" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251823.1" /db_xref="GeneID:880097" /translation="MSDKKTQTRARILGAATQALLERGAVEPSVGEVMGAAGLTVGGF YAHFQSKDALMLEAFEQLLGKRRELLGELDPGLSGKERRALAAAFYLSRKHRDAQVDA GCPLPATLAEVARLPEGFREVLSRHVEIMVTSLAESPEETDVALADLVLMIGGLALAR ALGPGELSDRVLRAAKQAVN" misc_feature complement(3514098..3514556) /locus_tag="PA3133" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene complement(3514723..3514798) /locus_tag="PA3133.1" /db_xref="GeneID:3240227" tRNA complement(3514723..3514798) /locus_tag="PA3133.1" /product="tRNA-Glu" /db_xref="GeneID:3240227" gene complement(3514845..3514920) /locus_tag="PA3133.2" /db_xref="GeneID:3240243" tRNA complement(3514845..3514920) /locus_tag="PA3133.2" /product="tRNA-Ala" /db_xref="GeneID:3240243" gene complement(3515014..3515089) /locus_tag="PA3133.3" /db_xref="GeneID:3240246" tRNA complement(3515014..3515089) /locus_tag="PA3133.3" /product="tRNA-Glu" /db_xref="GeneID:3240246" gene complement(3515138..3515213) /locus_tag="PA3133.4" /db_xref="GeneID:3240219" tRNA complement(3515138..3515213) /locus_tag="PA3133.4" /product="tRNA-Ala" /db_xref="GeneID:3240219" gene complement(3515416..3516900) /gene="gltX" /locus_tag="PA3134" /db_xref="GeneID:882647" CDS complement(3515416..3516900) /gene="gltX" /locus_tag="PA3134" /EC_number="6.1.1.17" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutamate--tRNA ligase" /protein_id="NP_251824.1" /db_xref="GeneID:882647" /translation="MTTVRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIED TDQLRSTRESEQQIYDALRWLGIEWDEGPDVGGPHGPYRQSERGHIYKKYSDELVEKG HAFTCFCTPERLDAVRAEQMARKETPRYDGHCMHLPKDEVQRRLAAGESHVTRMKVPT EGVCVVPDMLRGDVEIPWDRMDMQVLMKADGLPTYFLANVVDDHLMGITHVLRGEEWL PSAPKLIKLYEYFGWEQPQLCYMPLLRNPDKSKLSKRKNPTSITFYERMGYLPQALLN YLGRMGWSMPDEREKFTLAEMIEHFDLSRVSLGGPIFDLEKLSWLNGQWIREQSVEEF AREVQKWALNPEYLMKIAPHVQGRVENFSQIAPLAGFFFSGGVPLDASLFEHKKLDPT QVRQVLQLVLWKLESLRQWEKERITGCIQAVAEHLQLKLRDVMPLMFPAITGHASSVS VLDAMEILGADLSRYRLRQALELLGGASKKETKEWEKIRDAIPG" misc_feature complement(3515476..3516897) /gene="gltX" /locus_tag="PA3134" /note="Glutamyl- or glutaminyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: GlnS; COG0008" /db_xref="CDD:439779" gene complement(3516938..3517858) /locus_tag="PA3135" /db_xref="GeneID:882648" CDS complement(3516938..3517858) /locus_tag="PA3135" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251825.1" /db_xref="GeneID:882648" /translation="MGLDDALIFTRVVEYHSFTQAAQSLGMQKSTVSRRIALLEERLG VRLLNRTTRKLRLTEVGQAYYERCRQIMHDFAEAEQAVMQLQQAPSGLLRITSPIEFG QMFLASLLGDFMRQYPQITAEVELASRSVDPLQEGVDIVIMVGQPEDSTLVARRLLST SRWLCASPDYLAAHGTPTSVAELAGHRAVLLSTDSQRYWPLSGDSLPCQRVLSCNNIT FAREAVVAGAGIAALPALICAESVHSGRLVRLLADVPLPVGELYAVYPSRRFQAMKVK AFLDFLISRLPADTGRLLEPEAARLITSRP" misc_feature complement(3517673..3517852) /locus_tag="PA3135" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(3517013..3517588) /locus_tag="PA3135" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature complement(order(3517076..3517078,3517157..3517159, 3517208..3517210,3517379..3517381,3517385..3517387, 3517427..3517429,3517544..3517546,3517556..3517558)) /locus_tag="PA3135" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature complement(order(3517181..3517183,3517190..3517195, 3517214..3517228,3517298..3517300,3517481..3517501, 3517505..3517507,3517517..3517519,3517526..3517531, 3517535..3517540,3517550..3517555)) /locus_tag="PA3135" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" protein_bind 3517392..3517404 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 3517928..3518995 /locus_tag="PA3136" /db_xref="GeneID:882602" CDS 3517928..3518995 /locus_tag="PA3136" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="secretion protein" /protein_id="NP_251826.1" /db_xref="GeneID:882602" /translation="MAEFCRRNTPPMPAQLKRRLTVFLVAVGLIALAFFLHWWFIGRH VESTDNAYVQGEITRVASQLGARVEEVLVRDNQHVDKGQLLVRLEDADFKLAVERAQA ALATREAELAQARSKLVQQGSLIAASAADVNASQATLGRAQIDLNRAEALRKPGYVSE ERVTTLTADNHVARSQLAKARADLEAQRVQRDTLGAEIKRLEAQIASARTELAQAEIN LSRTLIHSPISGLVGQRSARNGQYVQVGTHLLSLVPDEDIWVQANFKETQVGRMRDGQ KARLTFDAFPDTPIDGRIDSLFAASGAQFSLLPPDNATGNFTKVVQRIPVKIVFEADN PLHGRIRPGMSVEAEVELRDR" misc_feature 3517961..3518986 /locus_tag="PA3136" /note="Multidrug resistance efflux pump EmrA [Defense mechanisms]; Region: EmrA; COG1566" /db_xref="CDD:441174" gene 3519045..3520544 /locus_tag="PA3137" /db_xref="GeneID:882603" CDS 3519045..3520544 /locus_tag="PA3137" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_251827.1" /db_xref="GeneID:882603" /translation="MLSAMLGAFMAVLDIQITNSSLKDIQGALAATLEEGSWISTSYL VAEIIMIPMTAWLVQLLSARRLAVMISVGFLVSSLLCSFAWNLESMIVFRAMQGFTGG ALIPLAFTLALVKLPEHHRPKGMALFAITATFAPSIGPTLGGWLTENFGWEYIFYINV PPGLLMIAGLLYGLEKKAPHWELLKSTDYAGIVTLGIGLGCLQVFLEEGHRKDWLESQ LIVSLGSVALFSLVLFVILQLSRPNPLIDLGILRNRNFGLASISSIGLGMGLYGSIYV LPLYLAQIQGYNAMQIGEVIMWMGIPQLFLIPLVPKLMKLVSPRLLCAAGFGLFGLAS FFSGVLNPDFAGPQFNQIQLLRALGQPMIMVTISLIATAYLQPQDAGSASSLFNILRN LGGAIGIALLATLLDSRAKVYFDYLREALVPTNPQVDERLAQLAAQLGSQQAALGKLS EITHQQAMIMAYNDAFHVIGMVLAVSMLAVLLTRSLPAGIGARADAGAH" misc_feature 3519054..3520496 /locus_tag="PA3137" /note="Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_LmrB_MDR_like; cd17503" /db_xref="CDD:341046" misc_feature order(3519075..3519080,3519087..3519092,3519099..3519101, 3519195..3519197,3519345..3519350,3519354..3519362, 3519369..3519371,3519429..3519431,3519438..3519443, 3519450..3519452,3519831..3519833,3519840..3519845, 3519852..3519860,3519867..3519869,3519951..3519953, 3519963..3519965,3520119..3520124,3520134..3520136, 3520146..3520148,3520194..3520196,3520203..3520208, 3520215..3520220,3520227..3520229) /locus_tag="PA3137" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341046" gene complement(3520548..3522560) /gene="uvrB" /locus_tag="PA3138" /db_xref="GeneID:882670" CDS complement(3520548..3522560) /gene="uvrB" /locus_tag="PA3138" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit B" /protein_id="NP_251828.1" /db_xref="GeneID:882670" /translation="MDTFQLDSRFKPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGK TFSIANVIAQVQRPTLVLAPNKTLAAQLYGEFKTFFPHNSVEYFVSYYDYYQPEAYVP SSDTYIEKDSSINDHIEQMRLSATKALLERPDAIIVATVSSIYGLGDPASYLKMVLHL DRGDRIDQRELLRRLTSLQYTRNDMDFARATFRVRGDVIDIFPAESDLEAIRVELFDD EVESLSAFDPLTGEVIRKLPRFTFYPKSHYVTPRETLLEAVDQIKAELKERLDYLRNN NKLVEAQRLEQRTRFDLEMILELGYCNGIENYSRYLSGRAPGEPPPTLYDYLPANSLL VIDESHVSVPQVGAMFKGDRSRKETLVEYGFRLPSALDNRPLRFEEWEAVSPQTIFVS ATPGPYEAEHAGRVIEQVVRPTGLVDPEIEVRPAMTQVDDLLSQIRQRVAKDERVLVT TLTKRMAEDLTDYLGDHDVRVRYLHSDIDTVERVEIIRDLRAGAFDVLVGINLLREGL DMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLHGKAILYADNVTGSMQRAIDET ERRRAKQIAFNEAHGIVPKGVRKDIKDILEGAVVPGARGKRKGVAKVAEESGRYENEL RSPSEISKRIRQLEEKMYQLARDLEFEAAAQLRDEIQTLRERLVNV" misc_feature complement(3520563..3522551) /gene="uvrB" /locus_tag="PA3138" /note="Excinuclease UvrABC helicase subunit UvrB [Replication, recombination and repair]; Region: UvrB; COG0556" /db_xref="CDD:440322" gene 3522748..3523944 /locus_tag="PA3139" /db_xref="GeneID:882671" CDS 3522748..3523944 /locus_tag="PA3139" /EC_number="2.6.1.57" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aspartate aminotransferase" /protein_id="NP_251829.1" /db_xref="GeneID:882671" /translation="MSLFSAVEMAPRDPILGLNEAFNADTRPGKINLGVGVYYNEEGR IPLLRAVQAAEKARIEAHAPRGYLPIEGIAAYDQGVQKLLFGNESELLAAGRVVTTQA VGGTGALKLGADFLKRLLPDATVAISDPSWENHRALFEAAGFPVQNYRYYDAASNGVN RAGLLEDLNALPARSIVVLHACCHNPTGVDLELDDWKQVLDVLKAKGHVPFLDIAYQG FGNGIEEDAAAVRLFAQSGLSFFVSSSFSKSFSLYGERVGALSIVTESRDESARVLSQ VKRVIRTNYSNPPTHGASVVSSVLNSPELRALWEQELGEMRDRIRDMRLAMVEQLAAH GAKRDFSFVGRQRGMFSYSGLTADQVERLKTEFGIYAVSTGRICVAALNKSNLETITK AIVQVL" misc_feature 3522754..3523941 /locus_tag="PA3139" /note="aromatic amino acid transaminase; Region: PRK09257" /db_xref="CDD:181731" misc_feature order(3523066..3523068,3523171..3523173,3523372..3523374, 3523507..3523515,3523621..3523623,3523630..3523632) /locus_tag="PA3139" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" gene 3524012..3524087 /locus_tag="PA3139.1" /db_xref="GeneID:3240254" tRNA 3524012..3524087 /locus_tag="PA3139.1" /product="tRNA-Asn" /db_xref="GeneID:3240254" gene complement(3524161..3524490) /locus_tag="PA3140" /db_xref="GeneID:882703" CDS complement(3524161..3524490) /locus_tag="PA3140" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251830.1" /db_xref="GeneID:882703" /translation="MHLIKSALLLILFACLPFSASAAPVAVAKNPLAATTPATTVSPG EQVNINTVDEAALIRGLNGVGEAKARAILEYRAAHGPFVSVDQLLEVKGVGPALLEKN RARIVIE" misc_feature complement(3524173..3524379) /locus_tag="PA3140" /note="DNA uptake protein ComE or related DNA-binding protein [Replication, recombination and repair]; Region: ComEA; COG1555" /db_xref="CDD:441164" gene complement(3524681..3526678) /gene="wbpM" /locus_tag="PA3141" /db_xref="GeneID:882583" CDS complement(3524681..3526678) /gene="wbpM" /locus_tag="PA3141" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="nucleotide sugar epimerase/dehydratase WbpM" /protein_id="NP_251831.1" /db_xref="GeneID:882583" /translation="MLDNLRIKLLGLPRRYKRMLQVAADVTLVWLSLWLAFLVRLGTE DMISPFSGHAWLFIAAPLVAIPLFIRFGMYRAVMRYLGNDALIAIAKAVTISALVLSL LVYWYRSPPAVVPRSLVFNYWWLSMLLIGGLRLAMRQYFMGDWYSAVQSVPFLNRQDG LPRVAIYGAGAAGNQLVAALRLGRAMRPVAFIDDDKQIANRVIAGLRVYTAKHIRQMI DETGAQEVLLAIPSATRARRREILESLEPFPLHVRSMPGFMDLASGRVKVDDLQEVDI ADLLGRDSVAPRKELLERCIRGQVVMVTGAGGSIGSELCRQIMSCSPSVLILFEHSEY NLYSIHQELERRIKRESLSVNLLPILGSVRNPERLVDVMRTWKVNTVYHAAAYKHVPI VEHNIAEGVLNNVIGTLHAVQAAVQVGVQNFVLISTDKAVRPTNVMGSTKRLAEMVLQ ALSNESAPVLFGDRKDVHHVNKTRFTMVRFGNVLGSSGSVIPLFREQIKRGGPVTVTH PSITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGPPVKILELAEKMIHLSGLSVRSE RSPHGDIAIEFSGLRPGEKLYEELLIGDNVNPTDHPMIMRANEEHLSWEAFKVVLEQL LAAVEKDDYSRVRQLLRETVSGYAPDGEIVDWIYRQRRREP" misc_feature complement(3525905..3526282) /gene="wbpM" /locus_tag="PA3141" /note="NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: FlaA1; COG1086" /db_xref="CDD:440703" misc_feature complement(3524852..3525778) /gene="wbpM" /locus_tag="PA3141" /note="Polysaccharide biosynthesis protein; Region: Polysacc_synt_2; pfam02719" /db_xref="CDD:426938" misc_feature complement(order(3525218..3525223,3525230..3525241, 3525353..3525355,3525401..3525403,3525470..3525472, 3525515..3525517,3525521..3525529,3525590..3525598, 3525686..3525691,3525749..3525760,3525764..3525766)) /gene="wbpM" /locus_tag="PA3141" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187548" misc_feature complement(order(3525200..3525202,3525215..3525220, 3525473..3525475,3525482..3525484,3525491..3525493, 3525503..3525505,3525512..3525523,3525575..3525577, 3525584..3525586,3525593..3525604,3525656..3525658, 3525668..3525670,3525680..3525682,3525686..3525688)) /gene="wbpM" /locus_tag="PA3141" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187548" misc_feature complement(order(3524927..3524929,3524936..3524938, 3525035..3525037,3525140..3525142,3525146..3525148, 3525158..3525166,3525197..3525202,3525209..3525217, 3525233..3525238,3525365..3525367,3525389..3525397, 3525515..3525517)) /gene="wbpM" /locus_tag="PA3141" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187548" misc_feature complement(order(3525353..3525355,3525365..3525367, 3525395..3525397,3525467..3525469)) /gene="wbpM" /locus_tag="PA3141" /note="active site" /db_xref="CDD:187548" protein_bind 3526934..3526946 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 3526945..3526957 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(3527429..3527734) /locus_tag="PA3142" /db_xref="GeneID:882584" CDS complement(3527429..3527734) /locus_tag="PA3142" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251832.1" /db_xref="GeneID:882584" /translation="MDFVFDALSTGRRIKCLTVVDDFTKESVGILVEHGISGFRVTRA LDEMARLRGYPKAIRTPEFTGKALDQWAYRRDIKLKLTQSGKPTQNAFIVIQRQVPQ" misc_feature complement(3527474..3527734) /locus_tag="PA3142" /note="Integrase core domain; Region: rve; pfam00665" /db_xref="CDD:459897" gene complement(3527670..3528212) /locus_tag="PA3143" /db_xref="GeneID:882682" CDS complement(3527670..3528212) /locus_tag="PA3143" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719764.1" /db_xref="GeneID:882682" /translation="MTVPDAKRLKDLELENSRLKKLLAESLLDIGALKVVTRGKGEPG SGAGGQEMQAQTDISERRACQLFRLSRSVLCHQPRTSVQNTELQAQLVELARASALWL SPPAHSAAACWCADQLQADLPAILSRRLDGEAAEAPPQGRGGVRMPEPAERTELGLVD GFRLRRAQHWATDQMPDGGR" misc_feature complement(<3527919..3528212) /locus_tag="PA3143" /note="IS3 family transposase; Region: transpos_IS3; NF033516" /db_xref="CDD:468052" gene complement(3528428..3529447) /gene="wbpL" /locus_tag="PA3145" /db_xref="GeneID:882697" CDS complement(3528428..3529447) /gene="wbpL" /locus_tag="PA3145" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glycosyltransferase WbpL" /protein_id="NP_251835.1" /db_xref="GeneID:882697" /translation="MMIWMIACLVVLLFSFVATWGLRRYALATKLMDVPNARSSHSQP TPRGGGVAIVLVFLAALVWMLSAGSISGGWGGAMLGAGSGVALLGFLDDHGHIAARWR LLGHFSAAIWILLWTGGFPPLDVVGHAVDLGWLGHVLAVFYLVWVLNLYNFMDGIDGI ASVEAIGVCVGGALIYWLTGHVAMVGIPLLLACAVAGFLIWNFPPARIFMGDAGSGFL GMVIGALAIQAAWTAPSLFWCWLILLGVFIVDATYTLIRRIARGEKFYEAHRSHAYQF ASRRYASHLRVTLGVLAINTLWLLPLALMVALGWISGFIGILVAYAPLCLLAVGYKAG SLEKS" misc_feature complement(3528587..3529357) /gene="wbpL" /locus_tag="PA3145" /note="The members of this subfamily catalyze the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate (Und-P) molecule and N-acetylhexosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylhexosamine precursor; Region: GT_WbpL_WbcO_like; cd06854" /db_xref="CDD:133464" misc_feature complement(3529169..3529174) /gene="wbpL" /locus_tag="PA3145" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:133464" misc_feature complement(3528812..3528823) /gene="wbpL" /locus_tag="PA3145" /note="putative catalytic motif [active]" /db_xref="CDD:133464" misc_feature complement(order(3528632..3528643,3528674..3528676)) /gene="wbpL" /locus_tag="PA3145" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:133464" gene complement(3529508..3530458) /gene="wbpK" /locus_tag="PA3146" /db_xref="GeneID:882698" CDS complement(3529508..3530458) /gene="wbpK" /locus_tag="PA3146" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="NAD-dependent epimerase/dehydratase" /protein_id="NP_251836.1" /db_xref="GeneID:882698" /translation="MVTGASGFVGSALCCELARTGYAVIAVVRRVVERIPSVTYIEAD LTDPATFAGEFPTVDCIIHLAGRAHILTDKVADPLAAFREVNRDATVRLATRALEAGV KRFVFVSSIGVNGNSTRQQAFNEDSPAGPHAPYAISKYEAEQELGTLLRGKGMELVVV RPPLIYANDAPGNFGRLLKLVASGLPLPLDGVRNARSLVSRRNIVGFLSLCAEHPDAA GELFLVADGEDVSIAQMIEALSRGMGRRPALFTFPAVLLKLVMCLLGKASMHEQLCGS LQVDASKARRLLGWVPVETIGAGLQAAGREYILRQRERRK" misc_feature complement(3529550..3530458) /gene="wbpK" /locus_tag="PA3146" /note="A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous...; Region: Rossmann-fold NAD(P)(+)-binding proteins; cl21454" /db_xref="CDD:473865" misc_feature complement(order(3529964..3529975,3530042..3530044, 3530054..3530056,3530129..3530137,3530261..3530269, 3530369..3530377,3530432..3530434,3530438..3530443, 3530447..3530449)) /gene="wbpK" /locus_tag="PA3146" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187543" misc_feature complement(order(3530042..3530044,3530054..3530056, 3530129..3530131,3530201..3530203)) /gene="wbpK" /locus_tag="PA3146" /note="active site" /db_xref="CDD:187543" gene complement(3530467..3531708) /gene="wbpJ" /locus_tag="PA3147" /db_xref="GeneID:882692" CDS complement(3530467..3531708) /gene="wbpJ" /locus_tag="PA3147" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycosyl transferase WbpJ" /protein_id="NP_251837.1" /db_xref="GeneID:882692" /translation="MNVWYVHPYAGGPGVGRYWRPYYFSKFWNQAGHRSVIISAGYHH LLEPDEKRSGVTCVNGAEYAYVPTLRYLGNGVGRMLSMLIFTMMLLPFCLILALKRGT PDAIIYSSPHPFGVVSCWLAARLLGAKFVFEVRDIWPLSLVELGGLKADNPLVRVTGW IERFSYARADKIISLLPCAEPHMADKGLAAGKFLWVPNGVDSSDISPDSAVSSSDLVR HVQVLKEQGVFVVIYAGAHGEPNALEGLVRSAGLLRERGASIRIILVGKGECKEQLKA IAAQDASGLVEFFDQQPKETIMAVLKLASAGYISLKSEPIFRFGVSPNKLWDYMLVGL PVIFACKAGNDPVSDYDCGVSADPDAPEDITAAIFRLLLLSEDERRTMGQRGRDAVLE HYTYESLALQVLNALADGRAA" misc_feature complement(3530497..3531705) /gene="wbpJ" /locus_tag="PA3147" /note="Escherichia coli WbuB and similar proteins; Region: GT4_WbuB-like; cd03794" /db_xref="CDD:340825" protein_bind 3531431..3531443 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3147" /bound_moiety="AmrZ" protein_bind complement(3531466..3531478) /gene="wbpJ" /locus_tag="PA3147" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3147" /bound_moiety="AmrZ" gene complement(3531751..3532815) /gene="wbpI" /locus_tag="PA3148" /db_xref="GeneID:882693" CDS complement(3531751..3532815) /gene="wbpI" /locus_tag="PA3148" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimeras" /protein_id="NP_251838.1" /db_xref="GeneID:882693" /translation="MKILTIIGARPQFIKASVVSKAIIEQQTLSEIIVHTGQHFDANM SEIFFEQLGIPKPDYQLDIHGGTHGQMTGRMLMEIEDVILKEKPHRVLVYGDTNSTLA GALAASKLHVPIAHIEAGLRSFNMRMPEEINRILTDQVSDILFCPTRVAIDNLKNEGF ERKAAKIVNVGDVMQDSALFFAQRATSPIGLASQDGFILATLHRAENTDDPVRLTSIV EALNEIQINVAPVVLPLHPRTRGVIERLGLKLEVQVIDPVGYLEMIWLLQRSGLVLTD SGGVQKEAFFFGKPCVTMRDQTEWVELVTCGANVLVGAARDMIVESARTSLGKTIQDD GQLYGGGQASSRIAEYLAKL" misc_feature complement(3531757..3532815) /gene="wbpI" /locus_tag="PA3148" /note="UDP-N-acetylglucosamine 2-epimerase [Cell wall/membrane/envelope biogenesis]; Region: WecB; COG0381" /db_xref="CDD:440150" gene complement(3532812..3533933) /gene="wbpH" /locus_tag="PA3149" /db_xref="GeneID:882607" CDS complement(3532812..3533933) /gene="wbpH" /locus_tag="PA3149" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycosyltransferase WbpH" /protein_id="NP_251839.1" /db_xref="GeneID:882607" /translation="MTKVAHLTSVHSRYDIRIFRKQCRTLSQYGYDVYLVVADGKGDE VKDGVRIVDVGVLSGRLNRILKTTRKIYEQALALGADVYHFHDPELIPVGLRLKKQGK QVIFDSHEDVPKQLLSKPYMRPFLRRVVAVLFSCYEKYACPKLDAVLTATPHIREKFK NINGNVLDINNFPMLGELDAMVPWASKKTEVCYVGGITSIRGVREVVKSLECLKSSAR LNLVGKFSEPEIEKEVRALKGWNSVNEHGQLDREDVRRVLGDSVAGLVTFLPMPNHVD AQPNKMFEYMSSGIPVIASNFPLWREIVEGSNCGICVDPLSPAAIAEAIDYLVSNPCE AAALGRNGQRAVNERYNWDLEGRKLARFYSDLLSKRDSI" misc_feature complement(3532854..3533927) /gene="wbpH" /locus_tag="PA3149" /note="Escherichia coli WbuB and similar proteins; Region: GT4_WbuB-like; cd03794" /db_xref="CDD:340825" gene complement(3533948..3535081) /gene="wbpG" /locus_tag="PA3150" /db_xref="GeneID:882581" CDS complement(3533948..3535081) /gene="wbpG" /locus_tag="PA3150" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="LPS biosynthesis protein WbpG" /protein_id="NP_251840.1" /db_xref="GeneID:882581" /translation="MMKICSRCVMDTSDAEIVFDEAGVCNHCHKFDNVQSRQLFSDAS GEQRLQKIIGQIKKDGSGKDYDCIIGLSGGVDSSYLAVKVKDLGLRPLVVHVDAGWNS ELAVSNIEKIVKYCGFDLHTHVINWEEIRDLQLAYMKAAVANQDVPQDHAFFASMYHF AVKNNIKYILSGGNLATEAVFPDTWHGSAMDAINLKAIHKKYGERPLRDYKTISFLEY YFWYPFVKGMRTVRPLNFMAYDKAKAETFLQETIGYRSYARKHGESIFTKLFQNYYLP TKFGYDKRKLHYSSMILSGQMTRDEAQAKLAEPLYDADELQFDIEYFCKKMRITQAQF EELMNAPVHDYSEFANWDSRQRIAKKVQMIVQRALGRRINVYS" misc_feature complement(3534065..3535078) /gene="wbpG" /locus_tag="PA3150" /note="N-acetyl sugar amidotransferase; Region: WbuX; TIGR03573" /db_xref="CDD:274658" gene complement(3535216..3535971) /gene="hisF2" /locus_tag="PA3151" /db_xref="GeneID:882582" CDS complement(3535216..3535971) /gene="hisF2" /locus_tag="PA3151" /EC_number="4.1.3.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="imidazole glycerol phosphate synthase subunit HisF" /protein_id="NP_251841.1" /db_xref="GeneID:882582" /translation="MVRRRVIPCLLLKDRGLVKTVKFKEPKYVGDPINAIRIFNEKEV DELILLDIDASRLNQEPNYELIAEVAGECFMPICYGGGIKTLEHAEKIFSLGVEKVSI NTAALMDLSLIRRIADKFGSQSVVGSIDCRKGFWGGHSVFSENGTRDMKRSPLEWAQA LEEAGVGEIFLNSIDRDGVQKGFDNALVENIASNVHVPVIACGGAGSIADLIDLFERT CVSAVAAGSLFVFHGKHRAVLISYPDVNKLDVG" misc_feature complement(3535225..3535965) /gene="hisF2" /locus_tag="PA3151" /note="AglZ/HisF2 family acetamidino modification protein; Region: AglZ_HisF2_fam; NF038364" /db_xref="CDD:439657" gene complement(3535971..3536579) /gene="hisH2" /locus_tag="PA3152" /db_xref="GeneID:882589" CDS complement(3535971..3536579) /gene="hisH2" /locus_tag="PA3152" /EC_number="2.4.2.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="imidazole glycerol phosphate synthase subunit HisH" /protein_id="NP_251842.1" /db_xref="GeneID:882589" /translation="MIVVIDYGVGNIASVLNMLKRVGAKAKASDSREDIEQAEKLILP GVGAFDAGMQTLRKSGLVDVLTEQVMIKRKPVMGVCLGSQMLGLRSEEGAEPGLGWID MDSVRFERRDDRKVPHMGWNQVSPQLEHPILSGINEQSRFYFVHSYYMVPKDPDDILL SCNYGQKFTAAVARDNVFGFQFHPEKSHKFGMQLFKNFVELV" misc_feature complement(3535977..3536579) /gene="hisH2" /locus_tag="PA3152" /note="imidazole glycerol phosphate synthase subunit HisH; Provisional; Region: hisH; PRK13181" /db_xref="CDD:183878" misc_feature complement(order(3536025..3536027,3536031..3536033, 3536334..3536348,3536439..3536462)) /gene="hisH2" /locus_tag="PA3152" /note="putative active site [active]" /db_xref="CDD:153219" misc_feature complement(3536439..3536462) /gene="hisH2" /locus_tag="PA3152" /note="oxyanion strand [active]" /db_xref="CDD:153219" misc_feature complement(order(3536025..3536027,3536031..3536033, 3536340..3536342)) /gene="hisH2" /locus_tag="PA3152" /note="catalytic triad [active]" /db_xref="CDD:153219" gene complement(3536576..3537811) /gene="wzx" /locus_tag="PA3153" /db_xref="GeneID:882590" CDS complement(3536576..3537811) /gene="wzx" /locus_tag="PA3153" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="O-antigen translocase" /protein_id="NP_251843.1" /db_xref="GeneID:882590" /translation="MSAAFINRVARVLVGTLGAQLITIGVTLLLVRLYSPAEMGAFSV WLSFATIFAVVVTGRYELAIFSTREEGELQAIVKLILQLTLLIFVAVAIAVVIGRHLI ESMPVVIGEYWFALAVASLGLGINKLVLSLLTFQQSFNRLGVARVSLAACIAVAQVSA AYLLEGVSGLIYGQLFGVVVATALAALWVGKSLILNCIETPWRMVRQVAVQYINFPKF SLPADLVNTVASQVPVILLAAKFGGDSAGWFALTLKIMGAPISLLAASVLDVFKEQAA RDYREFGNCRGIFLKTFRLLAVLALPPFIIFWFIGEWAFGLVFGEAWAESGRYAVLMV PLFYMRFVVSPLSYTIYIAQRQSMDLLWQLALLLLTFICFTLPDSVDSVLWFYSIAYA VMYFVYFWMSFQCAKGDAK" misc_feature complement(3536606..3537778) /gene="wzx" /locus_tag="PA3153" /note="Multidrug and toxic compound extrusion family and similar proteins; Region: MATE_like; cl09326" /db_xref="CDD:447704" protein_bind 3537728..3537740 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3153" /bound_moiety="AmrZ" gene complement(3537808..3539124) /gene="wzy" /locus_tag="PA3154" /db_xref="GeneID:882652" CDS complement(3537808..3539124) /gene="wzy" /locus_tag="PA3154" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="B-band O-antigen polymerase" /protein_id="NP_251844.1" /db_xref="GeneID:882652" /translation="MYILARVDRSILLNTVLLFAFFSATVWVNNNYIYHLYDYMGSAK KTVDFGLYPYLMVLALICALLCGGAIRRPGDLLVTLLVVILVPHSLVLNGANQYSPDA QPWAGVPLAIAFGILIIGIVNKIRFHPLGALQRENQGRRMLVLLSVLNIVVLVFIFFK SAGYFSFDFAGQYARRALAREVFAAGSANGYLSSIGTQAFFPVLFAWGVYRRQWFYLV LGIVNALVLWGAFGQKYPFVVLFLIYGLMVYFRRFGQVRVSWVVCALLMLLLLGALEH EVFGYSFLNDYFLRRAFIVPSTLLGAVDQFVSQFGSNYYRDTLLGALLGQGRTEPLSF RLGTEIFNNPDMNANVNFFAIAYMQLGYVGVMAESMLVGGSVVLMNFLFSRYGAFMAI PVALLFTTKILEQSLLTVMLGSGVFLMLLFLALISFPLKMSLGKTL" gene complement(3539128..3540207) /gene="wbpE" /locus_tag="PA3155" /db_xref="GeneID:882653" CDS complement(3539128..3540207) /gene="wbpE" /locus_tag="PA3155" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase" /protein_id="NP_251845.1" /db_xref="GeneID:882653" /translation="MIEFIDLKNQQARIKDKIDAGIQRVLRHGQYILGPEVTELEDRL ADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVALLGAKPVYV DIDPRTYNLDPQLLEAAITPRTKAIIPVSLYGQCADFDAINAIASKYGIPVIEDAAQS FGASYKGKRSCNLSTVACTSFFPSKPLGCYGDGGAIFTNDDELATAIRQIARHGQDRR YHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLSLKQVGIGTPFIEVN NISVYAQYTVRMDNRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAAT QVMSLPMHPYLDTASIKIICAALTN" misc_feature complement(3539137..3540198) /gene="wbpE" /locus_tag="PA3155" /note="dTDP-4-amino-4,6-dideoxygalactose transaminase [Cell wall/membrane/envelope biogenesis]; Region: WecE; COG0399" /db_xref="CDD:440168" gene complement(3540210..3540785) /gene="wbpD" /locus_tag="PA3156" /db_xref="GeneID:882593" CDS complement(3540210..3540785) /gene="wbpD" /locus_tag="PA3156" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="UDP-2-acetamido-3-amino-2, 3-dideoxy-D-glucuronate N-acetyltransferase" /protein_id="NP_251846.1" /db_xref="GeneID:882593" /translation="MSYYQHPSAIVDDGAQIGSDSRVWHFVHICAGARIGAGVSLGQN VFVGNKVVIGDRCKIQNNVSVYDNVTLEEGVFCGPSMVFTNVYNPRSLIERKDQYRNT LVKKGATLGANCTIVCGVTIGEYAFVGAGAVINKNVPSYALMVGVPARQIGWMSEFGE QLQLNEQGEAVCSHSGARYVLNGKILSKVDV" misc_feature complement(3540327..3540683) /gene="wbpD" /locus_tag="PA3156" /note="WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain. WcxM is thought to be bifunctional, catalyzing both the isomerization...; Region: LbH_WxcM_N_like; cd03358" /db_xref="CDD:100048" misc_feature complement(order(3540345..3540347,3540393..3540395, 3540450..3540452,3540459..3540461,3540465..3540467, 3540516..3540524,3540540..3540542,3540558..3540560, 3540564..3540566,3540588..3540590,3540612..3540614, 3540618..3540620)) /gene="wbpD" /locus_tag="PA3156" /note="putative trimer interface [polypeptide binding]; other site" /db_xref="CDD:100048" misc_feature complement(order(3540342..3540344,3540348..3540353, 3540378..3540383,3540396..3540401,3540435..3540437, 3540450..3540455,3540459..3540461,3540516..3540518, 3540522..3540524,3540606..3540608,3540612..3540614)) /gene="wbpD" /locus_tag="PA3156" /note="putative active site [active]" /db_xref="CDD:100048" misc_feature complement(order(3540522..3540524,3540606..3540608, 3540612..3540614)) /gene="wbpD" /locus_tag="PA3156" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:100048" misc_feature complement(order(3540330..3540332,3540342..3540344, 3540348..3540353,3540357..3540359,3540378..3540383, 3540396..3540401,3540405..3540407,3540435..3540437, 3540450..3540455,3540459..3540461,3540516..3540518, 3540522..3540524)) /gene="wbpD" /locus_tag="PA3156" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:100048" gene complement(3540782..3542671) /locus_tag="PA3157" /db_xref="GeneID:882641" CDS complement(3540782..3542671) /locus_tag="PA3157" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_251847.1" /db_xref="GeneID:882641" /translation="MSSSSSKLLNGMVAVSSGRNIRLDVQGLRAVAVLAVLAYHANSA WLRAGFVGVDVFFVISGFIITALLVERGVKVDLVEFYAGRIKRIFPAYFVMLAIVCIV STILFLPDDYVFFEKSLQSSVFFSSNHYFANFGSYFAPRAEELPLLHTWSLAIEMQFY LFYPVLFMCLPCRWRLPVFILLAILLFIWSGYCVFSGSQDAQYFALLARVPEFMSGAV VALSLRDRELPARLAILAGLLGAALLVCSFIIIDKQHFPGFWSLLPCLGAALLIAARR GPASLLLASRPMVWIGGISYSLYLWHWPILAFIRYYTGQYELSFVALLAFLTGSFLLA WFSYRYIETPARKAVGLRQQALKWMLAASVVAIVVTGGAQFNVLVVAPAPIQLTRYAV PESICHGVQVGECKRGSVNAVPRVLVIGDSHAAQLNYFFDVVGNESGVAYRVLTGSSC VPIPAFDLERLPRWARKPCQAQIDAVAQSMLNFDKIIVAGMWQYQMQSPAFAQAMRAF LVDTSYAGKQVVLLGQIPMFESNVQRVRRFRELGLSAPLVSSSWQGANQLLRALAEGI PNVRFMDFSTSAFFADAPYQDGELIYQDSHHLNEVGARRYGYFASRQLQRLFEQPQSS VSLKP" misc_feature complement(3541628..3542626) /locus_tag="PA3157" /note="Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains [Cell wall/membrane/envelope biogenesis]; Region: OafA; COG1835" /db_xref="CDD:441440" misc_feature complement(3540857..3541477) /locus_tag="PA3157" /note="SGNH domain (fused to AT3 domains); Region: SGNH; pfam19040" /db_xref="CDD:436916" gene complement(3542740..3543690) /gene="wbpB" /locus_tag="PA3158" /db_xref="GeneID:882642" CDS complement(3542740..3543690) /gene="wbpB" /locus_tag="PA3158" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="UDP-N-acetyl-2-amino-2-deoxy-D-glucuronate oxidase" /protein_id="NP_251848.1" /db_xref="GeneID:882642" /translation="MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSI SPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICEK PLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVAREKSPHKYEVDLTYI TSRGNWYLKSWKGDPRKSFGVATNIGVHFYDMLHFIFGKLQRNVVHFTSEYKAAGYLE YEQARVRWFLSVDANDLPESVKGKKPTYRSITVNGEEMEFSEGFTDLHTTSYEEILAG RGYGIDDARHCVETVNTIRSAVIVPASDNEGHPFVAALAR" misc_feature complement(3542926..3543690) /gene="wbpB" /locus_tag="PA3158" /note="Predicted dehydrogenase [General function prediction only]; Region: MviM; COG0673" /db_xref="CDD:440437" misc_feature complement(3542764..3543270) /gene="wbpB" /locus_tag="PA3158" /note="Oxidoreductase family, C-terminal alpha/beta domain; Region: GFO_IDH_MocA_C; pfam02894" /db_xref="CDD:427044" gene complement(3543764..3545074) /gene="wbpA" /locus_tag="PA3159" /db_xref="GeneID:879921" CDS complement(3543764..3545074) /gene="wbpA" /locus_tag="PA3159" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="UDP-N-acetyl-d-glucosamine 6-dehydrogenase" /protein_id="NP_251849.1" /db_xref="GeneID:879921" /translation="MIDVNTVVEKFKSRQALIGIVGLGYVGLPLMLRYNAIGFDVLGI DIDDVKVDKLNAGQCYIEHIPQAKIAKARASGFEATTDFSRVSECDALILCVPTPLNK YREPDMSFVINTTDALKPYLRVGQVVSLESTTYPGTTEEELLPRVQEGGLVVGRDIYL VYSPEREDPGNPNFETRTIPKVIGGHTPQCLEVGIALYEQAIDRVVPVSSTKAAEMTK LLENIHRAVNIGLVNEMKIVADRMGIDIFEVVDAAATKPFGFTPYYPGPGLGGHCIPI DPFYLTWKAREYGLHTRFIELSGEVNQAMPEYVLGKLMDGLNEAGRALKGSRVLVLGI AYKKNVDDMRESPSVEIMELIEAKGGMVAYSDPHVPVFPKMREHHFELSSEPLTAENL ARFDAVVLATDHDKFDYELIKAEAKLVVDSRGKYRSPAAHIIKA" misc_feature complement(3543794..3545023) /gene="wbpA" /locus_tag="PA3159" /note="UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell wall/membrane/envelope biogenesis]; Region: WecC; COG0677" /db_xref="CDD:440441" gene complement(3545881..3546927) /gene="wzz" /locus_tag="PA3160" /db_xref="GeneID:879922" CDS complement(3545881..3546927) /gene="wzz" /locus_tag="PA3160" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="O-antigen chain length regulator" /protein_id="NP_251850.1" /db_xref="GeneID:879922" /translation="MTDEIQKHGGVAGDIDLVELVRGLWEEKWIVLIFSLLGILFAAI YAFLSTPVYEARIAILPPSLSDVAGFNQGRTRETGLGPFKVQDVYSVFVRNLQADGTR HRFFNETYLPSLDEELRSVSRDALYKRFTDQISISLPGKDFPGRYLVAIEQEDPERAA SWVRRYIADAAEISIQEMLNNAHREIEVKARDIEQRIQNLRENAKARREDRIVQLKEA LKVAGALKLEEPPLISGQSSEELSAIMNGSLMYMRGSKAIMAEIQTLEARSSDDPFIP ALRTLQEQQLLLSSLRVNSERVSVFRQDGPIETPDSPVRPRRAMILIFGLIIGGVLGG FLALCRIFLKKYAR" misc_feature complement(3545884..3546927) /gene="wzz" /locus_tag="PA3160" /note="LPS O-antigen chain length determinant protein, WzzB/FepE family [Cell wall/membrane/envelope biogenesis]; Region: WzzB; COG3765" /db_xref="CDD:442979" gene complement(3547689..3547973) /gene="himD" /locus_tag="PA3161" /db_xref="GeneID:882561" CDS complement(3547689..3547973) /gene="himD" /locus_tag="PA3161" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="integration host factor subunit beta" /protein_id="NP_251851.1" /db_xref="GeneID:882561" /translation="MTKSELIERIVTHQGQLSAKDVELAIKTMLEQMSQALATGDRIE IRGFGSFSLHYRAPRVGRNPKTGESVRLDGKFVPHFKPGKELRDRVNEPE" misc_feature complement(3547701..3547973) /gene="himD" /locus_tag="PA3161" /note="integration host factor subunit beta; Reviewed; Region: ihfB; PRK00199" /db_xref="CDD:178925" misc_feature complement(order(3547716..3547718,3547728..3547730, 3547734..3547736,3547740..3547742,3547746..3547751, 3547830..3547832,3547836..3547853,3547863..3547892, 3547896..3547904,3547911..3547913,3547923..3547925, 3547935..3547937,3547944..3547949,3547956..3547958, 3547965..3547967)) /gene="himD" /locus_tag="PA3161" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:259858" misc_feature complement(order(3547722..3547727,3547731..3547733, 3547737..3547739,3547803..3547808,3547812..3547814, 3547830..3547832,3547836..3547844,3547962..3547967)) /gene="himD" /locus_tag="PA3161" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:259858" gene complement(3548110..3549789) /gene="rpsA" /locus_tag="PA3162" /db_xref="GeneID:882562" CDS complement(3548110..3549789) /gene="rpsA" /locus_tag="PA3162" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S1" /protein_id="NP_251852.1" /db_xref="GeneID:882562" /translation="MSESFAELFEESLKSLDMQPGAIITGIVVDIDGDWVTVHAGLKS EGVIPVEQFYNEQGELTIKVGDEVHVALDAVEDGFGETKLSREKAKRAESWIVLEAAF AADEVVKGVINGKVKGGFTVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLD QKRNNVVVSRRSVLEAENSAEREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLL HITDMAWKRIKHPSEIVNVGDEIDVKVLKFDRERNRVSLGLKQLGEDPWVAIKARYPE GTRVMARVTNLTDYGCFAELEEGVEGLVHVSEMDWTNKNIHPSKVVQVGDEVEVQVLD IDEERRRISLGIKQCKSNPWEDFSSQFNKGDRISGTIKSITDFGIFIGLDGGIDGLVH LSDISWNEVGEEAVRRFKKGDELETVILSVDPERERISLGIKQLEDDPFSNYASLHEK GSIVRGTVKEVDAKGAVISLGDDIEGILKASEISRDRVEDARNVLKEGEEVEAKIISI DRKSRVISLSVKSKDVDDEKDAMKELRKQEVESAGPTTIGDLIRAQMENQG" misc_feature complement(3548116..3549789) /gene="rpsA" /locus_tag="PA3162" /note="30S ribosomal protein S1; Reviewed; Region: rpsA; PRK06299" /db_xref="CDD:235775" gene complement(3550057..3550746) /gene="cmk" /locus_tag="PA3163" /db_xref="GeneID:878958" CDS complement(3550057..3550746) /gene="cmk" /locus_tag="PA3163" /EC_number="2.7.4.14" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytidylate kinase" /protein_id="NP_251853.1" /db_xref="GeneID:878958" /translation="MNGAVPMLAIDGPSGAGKGTVAGLLARRLGWNLLDSGALYRLLA FAAVNHGVDLTNEEALKVLAAHLDVQFVAADGSHGQRIILEGEEVTDVIRTEQVGAGA SQVAALPAVRDALLQRQRAFREAPGLVADGRDMGTVVFPDAPLKIFLTASAEERARRR YLQLKAKGADVDQSALLEEIRERDERDSQRAVAPLKPADDAILLDSTEMSIEAVVETI IRHCERQGWDV" misc_feature complement(3550075..3550731) /gene="cmk" /locus_tag="PA3163" /note="Cytidylate kinase [Nucleotide transport and metabolism]; Region: Cmk; COG0283" /db_xref="CDD:440052" gene complement(3550746..3552986) /locus_tag="PA3164" /pseudogene="unknown" /db_xref="GeneID:878959" /db_xref="PseudoCap:PA3164" gene complement(3552979..3554088) /gene="hisC2" /locus_tag="PA3165" /db_xref="GeneID:882694" CDS complement(3552979..3554088) /gene="hisC2" /locus_tag="PA3165" /EC_number="2.6.1.9" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="histidinol-phosphate aminotransferase" /protein_id="NP_251855.1" /db_xref="GeneID:882694" /translation="MSDFLALAQPGVQKLSPYVPGKPVDELARELGIDPAAIVKLASN ENPLGASPKALEAIRAELAELTRYPDGNGFELKRKLAERCAVDAAQVTLGNGSNDILD LVARAYLAPGLNAVFSEHAFAVYPIATQAVGAEGRAVKARAWGHDLEAMLAAIDGQTR VVFVANPNNPTGTWFGADALERFLAQVPAEVLVVLDEAYIEYAEGDELPDGLDYLARH PNLLVSRTFSKAYGLASLRVGYALSSKAVADVLNRVRQPFNVNSLALAAACAALDDHD YLAQSRRLNDSGMAQLEDGFHALGLSWIPSKGNFIAVDLARDAGPVYQALLREGVIVR PVAGYGMPTFLRVSIGLPEENDRFLQALGKVLAHD" misc_feature complement(3552994..3554043) /gene="hisC2" /locus_tag="PA3165" /note="Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid transport and metabolism]; Region: HisC; COG0079" /db_xref="CDD:439849" gene complement(3554157..3555254) /gene="pheA" /locus_tag="PA3166" /db_xref="GeneID:882699" CDS complement(3554157..3555254) /gene="pheA" /locus_tag="PA3166" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bifunctional chorismate mutase/prephenate dehydratase" /protein_id="NP_251856.1" /db_xref="GeneID:882699" /translation="MADQDQLKALRLRIDSLDEKLLELISERARCAQDVARVKTQTLG EGEAPVFYRPEREAWVLKHIMQLNKGPLDNEEVARLFREIMSSCLALEQPLKVAYLGP EGTFTQAAALKHFGNAVISTPMAAIDEVFREVAAGAVNFGVVPVENSTEGAVNHTLDS FLEHDMVICGEVELRIHHHLLVGETTKTDNITRIYSHAQSLAQCRKWLDSHYPSVERV AVSSNADAAKRVKSEWNSAAIAGDMAASLYDLSKLHEKIEDRPDNSTRFLIIGNQEVP PTGDDKTSIIVSMRNKPGALHELLVPFHNNGIDLTRIETRPSRSGKWTYVFFIDFVGH HKEPLIKDVLEKIGQEAVALKVLGSYPKAVL" misc_feature complement(3554751..3555254) /gene="pheA" /locus_tag="PA3166" /note="Chorismate mutase [Amino acid transport and metabolism]; Region: PheA; COG1605" /db_xref="CDD:441213" misc_feature complement(3554160..3554969) /gene="pheA" /locus_tag="PA3166" /note="Prephenate dehydratase [Amino acid transport and metabolism]; Region: PheA2; COG0077" /db_xref="CDD:439847" gene complement(3555254..3556339) /gene="serC" /locus_tag="PA3167" /db_xref="GeneID:882700" CDS complement(3555254..3556339) /gene="serC" /locus_tag="PA3167" /EC_number="2.6.1.52" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-phosphoserine/phosphohydroxythreonine aminotransferase" /protein_id="NP_251857.1" /db_xref="GeneID:882700" /translation="MSKRAFNFCAGPAALPDAVLQRAQAELLDWRGKGLSVMEMSHRS DDYVAIASKAEQDLRDLLDIPSDYKVLFLQGGASQQFAEIPLNLLPEDGVADYIDTGI WSKKAIEEARRYGTVNVAASAKEYDYFAIPGQNEWTLTKDAAYVHYASNETIGGLEFD WIPETGDVPLVTDMSSDILSRPLDVSRFGLIYAGAQKNIGPSGLVVVIVREDLLGRAR SVCPTMLNYKTAADNGSMYNTPATYSWYLSGLVFEWLKEQGGVTAMEQRNRAKKDLLY KTIDASDFYTNPIQPSARSWMNVPFRLADERLDKPFLEGAEARGLLNLKGHRSVGGMR ASIYNALGLDAVEALVAYMAEFEKEHG" misc_feature complement(3555257..3556336) /gene="serC" /locus_tag="PA3167" /note="3-phosphoserine/phosphohydroxythreonine transaminase; Region: PRK05355" /db_xref="CDD:235428" misc_feature complement(order(3555620..3555628,3555734..3555736, 3555998..3556003,3556010..3556012,3556106..3556108, 3556115..3556120,3556295..3556297,3556301..3556306, 3556319..3556321)) /gene="serC" /locus_tag="PA3167" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99736" misc_feature complement(order(3555359..3555361,3555749..3555754, 3555821..3555823,3555881..3555883,3556031..3556033, 3556106..3556111,3556310..3556312)) /gene="serC" /locus_tag="PA3167" /note="substrate-cofactor binding pocket [active]" /db_xref="CDD:99736" misc_feature complement(order(3555749..3555754,3555815..3555817, 3555821..3555823,3555881..3555883,3556031..3556033, 3556106..3556114)) /gene="serC" /locus_tag="PA3167" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99736" misc_feature complement(3555749..3555751) /gene="serC" /locus_tag="PA3167" /note="catalytic residue [active]" /db_xref="CDD:99736" gene complement(3556427..3559198) /gene="gyrA" /locus_tag="PA3168" /db_xref="GeneID:882800" CDS complement(3556427..3559198) /gene="gyrA" /locus_tag="PA3168" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit A" /protein_id="NP_251858.1" /db_xref="GeneID:882800" /translation="MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPV HRRVLYAMSELGNDWNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYML VDGQGNFGSVDGDNAAAMRYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMP TKIPNLLVNGSSGIAVGMATNIPPHNLGEVIDGCLALMDNPDLTVDELMQYIPGPDFP TAGIINGRAGIIEAYRTGRGRIYIRARAVVEEMEKGGGREQIIITELPYQLNKARLIE KIAELVKEKKIEGISELRDESDKDGMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGIN VVALVDGQPRTLNLKDMLEVFVRHRREVVTRRTVYELRKARERGHILEGQAVALSNID PVIELIKSSPTPAEAKERLIATAWESSAVEAMVERAGADACRPEDLDPQYGLRDGKYY LSPEQAQAILELRLHRLTGLEHEKLLSEYQEILNLIGELIRILTNPARLMEVIREELE AVKAEFGDARRTEIVASQVDLTIADLITEEDRVVTISHGGYAKSQPLAAYQAQRRGGK GKSATGMKDEDYIEHLLVANSHATLLLFSSKGKVYWLRTFEIPEASRTARGRPLVNLL PLDEGERITAMLQIDLEALQQNGGADDDLDEAEGAVLEGEVVEAAEVEEVEGETAELV AEPTGAYIFMATAFGTVKKTPLVQFSRPRSSGLIALKLEEGDTLIAAAITDGAKEVML FSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQLISMLIPESGAQILTASERGFGK RTPLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQEGEEIMLISDQGTLVRTRVDEV SLSGRNTQGVTLIKLASDEVLVGLERVQEPSGGDDEDLPEGEEAAESLGESAESESEP AAEAEGNEE" misc_feature complement(3556541..3559186) /gene="gyrA" /locus_tag="PA3168" /note="DNA gyrase subunit A; Validated; Region: PRK05560" /db_xref="CDD:235502" misc_feature complement(3557441..3557578) /gene="gyrA" /locus_tag="PA3168" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature complement(3557282..3557434) /gene="gyrA" /locus_tag="PA3168" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature complement(3557003..3557137) /gene="gyrA" /locus_tag="PA3168" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature complement(3556850..3556993) /gene="gyrA" /locus_tag="PA3168" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature complement(3556697..3556843) /gene="gyrA" /locus_tag="PA3168" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" gene complement(3559435..3560511) /locus_tag="PA3169" /db_xref="GeneID:882801" CDS complement(3559435..3560511) /locus_tag="PA3169" /EC_number="5.3.1.23" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="methylthioribose-1-phosphate isomerase" /protein_id="NP_251859.1" /db_xref="GeneID:882801" /translation="MRERLLAAERVKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEV AKAIRDMVVRGAPAIGISAAYGIVLGARARLAQGGDWRAALEEDFRLLADSRPTAVNL FWALNRMRDRLERMKEGDQPLAVLEAEAISIHESDREANLTMAQLGMELIRKQQGSPQ NILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIYADETRPWLQGSRLTAWELANEG IPVSLNVDSAAAHLMKTENITWVIVGADRITANGDVANKIGTYQLAVNAMHHGVRFMV VAPSSTIDMNLESGEDIPIEERDGRELLEIGGRRVAAEVDAYNPVFDVTPADLIDAIV TERGVVERPDAERMAALMSRKRLH" misc_feature complement(3559456..3560481) /locus_tag="PA3169" /note="5-methylthioribose/5-deoxyribulose 1-phosphate isomerase (methionine salvage pathway), a paralog of eIF-2B alpha subunit [Amino acid transport and metabolism]; Region: MtnA; COG0182" /db_xref="CDD:439952" gene 3560621..3561955 /locus_tag="PA3170" /db_xref="GeneID:882672" CDS 3560621..3561955 /locus_tag="PA3170" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="N-ethylammeline chlorohydrolase" /protein_id="NP_251860.1" /db_xref="GeneID:882672" /translation="MPNVRNPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAP REQAMRHGATEIRELPGMLLAPGLVNAHGHSAMSLFRGLADDLPLMTWLQDHIWPAEG QWVSEDFIRDGTELAIAEQVKGGITCFSDMYFYPQAICGVVHDSGVRAQVAIPVLDFP IPGARDSAEAIRQGMALFDDLKHHPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASI QMHVHETAFEVEQAMERNGERPLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVETNSS VIHCPESNLKLASGFCPVEKLWQAGVNVAIGTDGAASNNDLDLLGETRTAALLAKAVY GQATALDAHRALRMATLNGARALGLERLIGSLEAGKAADLVAFDLSGLAQQPVYDPVS QLIYASGRDCVRHVWVGGRQLLDDGRLLRHDEQRLIARAREWGAKIAASDRS" misc_feature 3560624..3561949 /locus_tag="PA3170" /note="TRZ/ATZ family hydrolase; Region: PRK09045" /db_xref="CDD:236366" misc_feature order(3560834..3560836,3560840..3560842,3561281..3561283, 3561290..3561292,3561392..3561394,3561545..3561547) /locus_tag="PA3170" /note="active site" /db_xref="CDD:238623" misc_feature order(3560912..3560914,3560921..3560923,3561014..3561019, 3561080..3561085) /locus_tag="PA3170" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:238623" gene 3562106..3562804 /gene="ubiG" /locus_tag="PA3171" /db_xref="GeneID:882673" CDS 3562106..3562804 /gene="ubiG" /locus_tag="PA3171" /EC_number="2.1.1.64" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ubiquinone biosynthesis O-methyltransferase" /protein_id="NP_251861.1" /db_xref="GeneID:882673" /translation="MSNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERA GLAGKKVLDIGCGGGILSEAMAQRGASVTGIDMGEAPLAVARLHQLESGVAVDYRQIT AEQMAEEMPGQFDVVTCLEMLEHVPDPASVIRACHRLVKPGGQVFLSTINRNPKAYLF AVIGAEYILQLLPRGTHDFRKFIRPSELGAWSREAGLEVKDIIGLTYNPLTKHYKLAN DVDVNYMVQTKREA" misc_feature 3562127..3562780 /gene="ubiG" /locus_tag="PA3171" /note="ubiquinone biosynthesis O-methyltransferase; Region: UbiG; TIGR01983" /db_xref="CDD:273910" misc_feature order(3562265..3562285,3562331..3562336,3562406..3562414, 3562463..3562465) /gene="ubiG" /locus_tag="PA3171" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 3562801..3563481 /locus_tag="PA3172" /db_xref="GeneID:882632" CDS 3562801..3563481 /locus_tag="PA3172" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phosphoglycolate phosphatase" /protein_id="NP_251862.1" /db_xref="GeneID:882632" /translation="MKRMRLKAVLFDMDGTLLDTAPDFIAITQAMRAAHGLPPVDEQR VRDVVSGGARAMVAAAFGLSLDSPEVEPLRQEFLDRYQEHCAVLSRPYDGIPELLAAI EKAGLIWGVVTNKPVRFAEPIMQRLGYAERSRVLVCPDHVTRSKPDPEPLLLACSQLG IDPSRVLFIGDDLRDIESGRDAGTKTAAVRYGYIHPEDNPAHWGADVIVDHPRELIDV LDRALCDC" misc_feature 3562801..3563472 /locus_tag="PA3172" /note="N-acetylmuramic acid 6-phosphate phosphatase MupP; Region: PRK13222" /db_xref="CDD:237310" misc_feature order(3562834..3562848,3563137..3563142,3563236..3563238, 3563308..3563313,3563320..3563325) /locus_tag="PA3172" /note="active site" /db_xref="CDD:319854" gene 3563546..3564286 /locus_tag="PA3173" /db_xref="GeneID:882633" CDS 3563546..3564286 /locus_tag="PA3173" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_251863.1" /db_xref="GeneID:882633" /translation="MFQYSARPDLLKDRVILVTGAGRGIGAAAAKTFAAHGATVLLLG KTEEYLNEVYDAIEAAGHPQAAVIPFNLETAQPHQFEELAATLENEFGHIDGLLHNAS ILGPRSPMQQISGENFMRVMQVNVNAMFMLTTAMLPLMKLSSDASIIFTSSSVGRKGR AYWGAYSVSKFATEGLMQTLADELDGTSAIRANSVNPGATRTSMRALAYPGENPLNNP TGEEIMPVYLYLMGPDSAGVNGQAFDAQ" misc_feature 3563549..3564283 /locus_tag="PA3173" /note="putative oxoacyl-(acyl carrier protein) reductase; Provisional; Region: PRK08945" /db_xref="CDD:236357" misc_feature order(3563603..3563605,3563609..3563614,3563618..3563620, 3563675..3563683,3563843..3563851,3563996..3564004, 3564041..3564043,3564053..3564055,3564134..3564145) /locus_tag="PA3173" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature order(3563918..3563920,3564002..3564004,3564041..3564043, 3564053..3564055) /locus_tag="PA3173" /note="active site" /db_xref="CDD:187535" gene 3564445..3565173 /locus_tag="PA3174" /db_xref="GeneID:882684" CDS 3564445..3565173 /locus_tag="PA3174" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251864.1" /db_xref="GeneID:882684" /translation="MSKHSPTDRLLQILIALGQAPEALSAKELSLTLGQPLSSTYRHL KTLLRWGLAEEQAGQGRYLPGPACLQLAKKFDREASLIGLAKPELKRLADLSQESVAL MVASNQQAICLELFDSPQPLRCCYQKGLAQPLLHGASAKALLAHLEDERREELYLAQE LSAERIDKLEQELRLIREQGYAVSQGEIDEGVWGISVPLLDSRQRLHGALSLMAPALR AQSRSECLRQWTLDAAARLSARLD" misc_feature 3564466..3565167 /locus_tag="PA3174" /note="DNA-binding transcriptional regulator, IclR family [Transcription]; Region: IclR; COG1414" /db_xref="CDD:441024" gene 3565189..3566124 /locus_tag="PA3175" /db_xref="GeneID:882685" CDS 3565189..3566124 /locus_tag="PA3175" /EC_number="3.5.3.8" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="formimidoylglutamase" /protein_id="NP_251865.1" /db_xref="GeneID:882685" /translation="MYPAPDMSLWQGRIDSQEGADARRWHQWMRPYADDAEAASVLLG FASDEGVRRNQGRQGARHGPPALRRALANLAWHGEQAIYDAGDIVAGDDLEAAQECYA QRVADLLACGHRVVGLGGGHEIAYASFAGLARHLSRHERLPRIGILNFDAHFDLRHAE RASSGTPFRQIAELCQASDWPFAYCCLGISRLSNTAALFDQAQRLGVRYLLDRQLQPW NLERSEAFLDGFLQSVDHLYLTVCLDVLPAAQAPGVSAPSAHGVEMPVVEHLVRRAKA SGKLRLADIAELNPQLDSDQRTARIAARLVDSLVN" misc_feature 3565216..3566121 /locus_tag="PA3175" /note="formimidoylglutamase; Region: hutG; TIGR01227" /db_xref="CDD:273513" misc_feature order(3565552..3565554,3565639..3565641,3565645..3565653, 3565678..3565683,3565912..3565914,3565918..3565920, 3566047..3566049) /locus_tag="PA3175" /note="putative active site [active]" /db_xref="CDD:212514" gene 3566163..3567377 /gene="gltS" /locus_tag="PA3176" /db_xref="GeneID:882660" /db_xref="PseudoCap:PA3176" CDS 3566163..3567377 /gene="gltS" /locus_tag="PA3176" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="glutamate/sodium ion symporter GltS" /protein_id="NP_251866.1" /db_xref="GeneID:882660" /db_xref="PseudoCap:PA3176" /translation="MPTLHLDALSTTALALLLLALGSQLKKRSRWLTRLCVPSPVIAG FGFAFLVWLLRDRGWLDIGLDTSLQTPLMVAFFTTVGLGGSLGLLRKGGKTLLVYLSA CWALAILQNLIGVGSAGLLGLDPLLGIMAGAVSLEGGFGAAAAFGPVAEGLGAQGATT VALASATFGMVAGGLLGSPVARWLIERNRLPVQAESDNRLEALGQQERRQHAAATLDG NLLLRLLTCVLLVMVLGFWLGDALEERLGLVLPSYVGAMFIAIVLRNLDDRLGWLRIP DHAVGTLGDVCLGIFLTMAMMSLKFWELENLGLPLLGVLFIQVAVLLLLTIFVLFRLL GRNYDAAVLCAGFLGHGLGATPNAVANMGAVCEHYRVFSHKAFIIVPLCGAVLIDLVA IPAITWFINAFS" misc_feature 3566172..3567275 /gene="gltS" /locus_tag="PA3176" /note="Sodium/glutamate symporter; Region: Glt_symporter; pfam03616" /db_xref="CDD:308938" protein_bind 3567430..3567442 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 3567441..3567453 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3177" /bound_moiety="AmrZ" gene 3567606..3568529 /locus_tag="PA3177" /db_xref="GeneID:882661" CDS 3567606..3568529 /locus_tag="PA3177" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251867.1" /db_xref="GeneID:882661" /translation="MAPPKQSNTIDFDAAKQKRGPQPGGNASGPRASNLTELRQQLTL QLQSSLEAERILGLFFEEVRQLIPLDALGYRHPGSDLRLEFGSSAKHSVSYRLSHDSD YLGELIFRRRQRLGEDEQRQLESLLGTLLFPLRNALLYRAAIQTALRDALTGTGNRIA MDQALGRELELARRNLQPLSVLMLDIDHFKRVNDHYGHAVGDEALKAVAETIKDHLRN VDMVFRFGGEEFLVLLSSTPLQAACMVGERLRQAVEELDYRHAGEPLKLSISLGCADL RPGEGSDDLLRRVDEALYEAKRDGRNRLRCA" misc_feature 3567771..3568526 /locus_tag="PA3177" /note="GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants [Signal transduction mechanisms]; Region: GGDEF; COG2199" /db_xref="CDD:441801" protein_bind 3567693..3567705 /locus_tag="PA3177" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3177" /bound_moiety="AmrZ" gene complement(3568636..3569013) /locus_tag="PA3178" /db_xref="GeneID:882704" CDS complement(3568636..3569013) /locus_tag="PA3178" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251868.1" /db_xref="GeneID:882704" /translation="MHRILAIALCMLWSVAGLAADAAMPAQSCASLGEATAGPEDNFR PPLEGEVIDKGRAYFHSAPRADCVTGVFVIPGDFITVYKPSGEWLNVMYVARDGKETS GWLLEKRVRLRQAFGGPDEPAQP" gene complement(3569106..3570266) /locus_tag="PA3179" /db_xref="GeneID:882705" CDS complement(3569106..3570266) /locus_tag="PA3179" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="ribosomal large subunit pseudouridine synthase B" /protein_id="NP_251869.1" /db_xref="GeneID:882705" /translation="MNDTPENPHVPVGEKLQKVLARLGVGSRRDVEVWIAEGRVNVNG SVASLGQRVDSHDAITVDGHLIRREEAAESVRRVLIYNKPEGEVCTRDDPEGRPTIFD RLPRLRTGRWINVGRLDINTTGLLLFTTDGELANRLMHPSYEMDREYAVRVRGEVTEE MIERLLNGVMLEDGPAKFSDIQQAPGGEGFNHWYHCVVMEGRNREVRRLWESQGLVVS RLKRVRFGPVFLTSELTMGRYREMDQREIDILSEEVGLKPVALPGMTTKAREKAERQQ RKQARPLARSERPEAGRKRAPRREDGENAARRAPASRPARGPQPSAERKGREQGTPVA ERPRESNRKPRPSKPRDERPASAPGDKPAARKPQVKRRPKPAGDGMRPGFRR" misc_feature complement(3569538..3570230) /locus_tag="PA3179" /note="Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605 [Translation, ribosomal structure and biogenesis]; Region: RsuA; COG1187" /db_xref="CDD:440800" misc_feature complement(<3569133..3569474) /locus_tag="PA3179" /note="transcription termination factor Rho; Provisional; Region: PRK12678" /db_xref="CDD:237171" gene 3570414..3570851 /locus_tag="PA3180" /db_xref="GeneID:882579" CDS 3570414..3570851 /locus_tag="PA3180" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251870.1" /db_xref="GeneID:882579" /translation="MHDVPPFSGAKLALFYGDHLVVYKRDEKPGIPFPGYWDFPGGGR EGLETPAECALRELEEEFSIRLEEPRIEWQRQYPSTSGSAPFAYFLVARLEDREFEAI RFGDEGQYWRLMEVDAYLAHAMAVPYLQSRLGDYLRERRRIGE" misc_feature 3570435..3570803 /locus_tag="PA3180" /note="uncharacterized NUDIX hydrolase subfamily; Region: NUDIX_Hydrolase; cd04682" /db_xref="CDD:467565" gene complement(3570941..3571603) /locus_tag="PA3181" /db_xref="GeneID:882580" CDS complement(3570941..3571603) /locus_tag="PA3181" /EC_number="4.1.2.14" /EC_number="4.1.3.16" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-dehydro-3-deoxy-phosphogluconate aldolase" /protein_id="NP_251871.1" /db_xref="GeneID:882580" /translation="MHNLEQKTARIDTLCREARILPVITIDREADILPMADALAAGGL TALEITLRTAHGLTAIRRLSEERPHLRIGAGTVLDPRTFAAAEKAGASFVVTPGCTDE LLRFALDSEVPLLPGVASASEIMLAYRHGYRRFKLFPAEVSGGPAALKAFSGPFPDIR FCPTGGVSLNNLADYLAVPNVMCVGGTWMLPKAVVDRGDWAQVERLSREALERFAEHR RH" misc_feature complement(3570968..3571594) /locus_tag="PA3181" /note="keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase; Provisional; Region: PRK05718" /db_xref="CDD:235577" misc_feature complement(order(3571112..3571114,3571190..3571192, 3571196..3571198,3571376..3571378,3571448..3571450, 3571460..3571462,3571535..3571537)) /locus_tag="PA3181" /note="active site" /db_xref="CDD:188632" misc_feature complement(order(3571136..3571141,3571151..3571153, 3571187..3571192,3571217..3571219,3571229..3571231, 3571235..3571246,3571304..3571315,3571370..3571372, 3571376..3571378,3571448..3571450)) /locus_tag="PA3181" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:188632" misc_feature complement(3571196..3571198) /locus_tag="PA3181" /note="catalytic residue [active]" /db_xref="CDD:188632" gene complement(3571621..3572337) /gene="pgl" /locus_tag="PA3182" /db_xref="GeneID:882680" CDS complement(3571621..3572337) /gene="pgl" /locus_tag="PA3182" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="6-phosphogluconolactonase" /protein_id="NP_251872.1" /db_xref="GeneID:882680" /translation="MAISELKLPAGVGLQVWGSAAEQARGLAAEVAGRLRSALAEQGQ ALLVVSGGRSPVAFLEALSEEPLDWSRITVSLADERWVPESHADSNAGLVRRHLLRGE AAKARFIGLYQPAASLEEAAELADHHLHELPLPIDVLVLGMGDDGHTASLFPNSPGLD LAMDPQGTRRCLPMWAPSVPHQRLTLPRAVLAAAKVQLLAIQGQSKLATLNAALAVED ERRMPVRAFLRAPLTIHWYP" misc_feature complement(3571624..3572292) /gene="pgl" /locus_tag="PA3182" /note="Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose...; Region: SugarP_isomerase; cl00339" /db_xref="CDD:469729" misc_feature complement(order(3571720..3571722,3571789..3571791, 3571894..3571896,3572098..3572100,3572176..3572181)) /gene="pgl" /locus_tag="PA3182" /note="putative active site [active]" /db_xref="CDD:238694" gene complement(3572324..3573793) /gene="zwf" /locus_tag="PA3183" /db_xref="GeneID:882681" CDS complement(3572324..3573793) /gene="zwf" /locus_tag="PA3183" /EC_number="1.1.1.49" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate 1-dehydrogenase" /protein_id="NP_251873.1" /db_xref="GeneID:882681" /translation="MPDVRVLPCTLALFGALGDLALRKLFPALYQLDRENLLHRDTRV LALARDEGAPAEHLATLEQRLRLAVPAKEWDDVVWQRFRERLDYLSMDFLDPQAYVGL REAVDDELPLVAYFATPASVFGGICENLAAAGLAERTRVVLEKPIGHDLESSREVNEA VARFFPESRIYRIDHYLGKETVQNLIALRFANSLFETQWNQNHISHVEITVAEKVGIE GRWGYFDQAGQLRDMVQNHLLQLLCLIAMDPPSDLSADSIRDEKVKVLRALEPIPAEQ LASRVVRGQYTAGFSDGKAVPGYLEEEHANRDSDAETFVALRVDIRNWRWSGVPFYLR TGKRMPQKLSQIVIHFKEPPHYIFAPEQRSLISNRLIIRLQPDEGISLQVMTKDQGLG KGMQLRTGPLQLSFSETYHAARIPDAYERLLLEVTQGNQYLFVRKDEVEFAWKWCDQL IAGWERLSEAPKPYPAGSWGPVASVALVARDGRSWYGDF" misc_feature complement(3572336..3573793) /gene="zwf" /locus_tag="PA3183" /note="Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]; Region: Zwf; COG0364" /db_xref="CDD:440133" gene 3573980..3574837 /locus_tag="PA3184" /db_xref="GeneID:882618" CDS 3573980..3574837 /locus_tag="PA3184" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="HTH-type transcriptional regulator" /protein_id="NP_251874.1" /db_xref="GeneID:882618" /translation="MKNLLEQIQSRLDELNKAERKVAEVILQNPQQATRFSIAALAQA AAVSEPTVNRFCRSFGMSGYPELKIQLAQSLASGAAFVTQAVAEDDGPEAYTRKIFSN TIASLDSAHKLLDPRVIDRAVDLLIQARQIHFFGLGASASVALDAQHKFFRFNLAVSA QADVLMQRMIASVAHTGDLFVVISYTGRTRELVEVAHLARENGASVLGLTAAGSPLAR ASTLCLDIPLPEDTDIYMPMTSRIVQLTVLDVLATGVTLRRGVDFQPHLRRIKESLVP TRYPLDEDN" misc_feature 3573986..3574834 /locus_tag="PA3184" /note="DNA-binding transcriptional regulator HexR; Provisional; Region: PRK11302" /db_xref="CDD:183082" gene complement(3574846..3575697) /locus_tag="PA3185" /db_xref="GeneID:882619" CDS complement(3574846..3575697) /locus_tag="PA3185" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251875.1" /db_xref="GeneID:882619" /translation="MLEHPLQRFFHSMRAKRPFDWVRFQRRDLLLIDHPLCQAVFSRQ GAQLLHFQPQGERPLLWCASEWPALSSAPVRGGIPVCWPWFGSHPNGSEWPQQGWARQ REWRLLDAYADESKVVVSWQLDLEDWHVRLDARLGQRLELELCSYHEEDDDCLFSFAL QPYWRVGALSRVVVHGMELESARGQRGASRIPGTWIPRGAVKQVLYHPGSLVLEDGGW NRRLRIDKNVSAGSVIWHPGSRPVEQVEPGEAERFLCIGAAGYRPGGLILAPGERMRL NLAAGLQ" misc_feature complement(3574870..3575610) /locus_tag="PA3185" /note="D-hexose-6-phosphate epimerase-like; Region: D-hex-6-P-epi_like; cd09020" /db_xref="CDD:185697" misc_feature complement(order(3574927..3574929,3574993..3574995, 3575092..3575094,3575209..3575211,3575215..3575217, 3575395..3575397,3575407..3575409,3575473..3575475)) /locus_tag="PA3185" /note="active site" /db_xref="CDD:185697" misc_feature complement(order(3575395..3575397,3575473..3575475)) /locus_tag="PA3185" /note="phosphate binding residues; other site" /db_xref="CDD:185697" misc_feature complement(order(3574927..3574929,3575215..3575217)) /locus_tag="PA3185" /note="catalytic residues [active]" /db_xref="CDD:185697" gene complement(3575912..3577276) /gene="oprB" /locus_tag="PA3186" /db_xref="GeneID:882788" CDS complement(3575912..3577276) /gene="oprB" /locus_tag="PA3186" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="porin B" /protein_id="NP_251876.1" /db_xref="GeneID:882788" /translation="MYKNKKTRPAARTVGCLFALGALGLGSAAHAAEAFSPNSKWMLG DWGGKRTELLEKGYDFKLEYVGEAAANLDGGYDDDKTGRYTDQFALGVHMDLEKILGW KATEFQFTVTERNGKNLSNDRIGDPRAGHISSVQEVWGRGQTWRLTQLWLKQQYFDGA LDVKFGRFGEGEDFNSFPCDFQNLAFCGSQVGNWAGSIWYNWPVSQWALRVKYNFAPD WYVQVGAYEQNPSNLETGNGFKMSGSGTKGALLPVELIWQPKVGAEQLPGEYRLGYYY STAKADDVYDDVDGQPQGLTGNDFKSRGSKHGWWVVAQQQVTSHNGDASRGLSLFANL TVHDKATNVVDNYQQLGVVYKGPFDARPKDDIGLGIARIHVNDDVKKRQRLVNQVNGI DDYDNPLYQPLQDTEYNAELYYGVHVTDWLTVRPNLQYIKQPGGVDEVDNALVAGIKI QTVF" misc_feature complement(3575915..3577255) /gene="oprB" /locus_tag="PA3186" /note="Carbohydrate-selective porin OprB [Cell wall/membrane/envelope biogenesis]; Region: OprB; COG3659" /db_xref="CDD:442876" gene complement(3577320..3578480) /locus_tag="PA3187" /db_xref="GeneID:880539" CDS complement(3577320..3578480) /locus_tag="PA3187" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_251877.1" /db_xref="GeneID:880539" /translation="MATLELRNLHKSYGSGLADTLRDIRLKIDSGEFLILVGPSGCGK STLMNCIAGLESITGGAILVDGQDISGMSPKDRDIAMVFQSYALYPTMSVRENIAFGL KIRKMPQAAIDEEVARVARLLQIEHLLERKPSQLSGGQQQRVAMGRALARRPKVYLFD EPLSNLDAKLRVEMRTELKLMHQRLKTTTVYVTHDQIEAMTLGDKVAVMKDGVIQQFG TPQQIYNDPANLFVASFIGSPPMNFIPLRLQRRDGRWTGLLDSGQDRIELPLSLEPGL EEGRELILGVRPEQIALGDGSAAHDLRTEVEVLEPTGPDTLVFVTVNQVKVCCRLAPD VAPAAGSGMSLRFDPARVLLFDAQSGERVAVRTAGVAAEKVTALNGNRQKNS" misc_feature complement(3577392..3578480) /locus_tag="PA3187" /note="ABC-type sugar transport system, ATPase component MalK [Carbohydrate transport and metabolism]; Region: MalK; COG3839" /db_xref="CDD:443050" gene complement(3578513..3579358) /locus_tag="PA3188" /db_xref="GeneID:880540" CDS complement(3578513..3579358) /locus_tag="PA3188" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_251878.1" /db_xref="GeneID:880540" /translation="MRDASLNPSFSVSRLAVHLTLWGACALYLVPLLVMLLTSFKTPD DIRTGNLLSLPDTFTVIGWLKAWDSVGAFFWNSVLITVPGVLISTFIGALNGYVLSMW RFRGSQLFFGALLFGCFLPFQVILLPMSFTLGKLGLANTTSGLVLVHVIYGLAFTTLF FRNYFVAIPDALVKAARLDGAGFFTIFLRILLPMSTPIVMVCLIWQFTQIWNDFLFGV VFASGDSQPITVALNNLVNITTGVKEYNVDMAAAMIAALPTLVVYVLAGKYFVRGLTA GAVKG" misc_feature complement(3578516..3579358) /locus_tag="PA3188" /note="ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpE; COG0395" /db_xref="CDD:440164" gene complement(3579351..3580283) /locus_tag="PA3189" /db_xref="GeneID:882900" CDS complement(3579351..3580283) /locus_tag="PA3189" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_251879.1" /db_xref="GeneID:882900" /translation="MATNSPVYPTAPVAPRRVSPLDRLQGWLPKLVLAPSVVVVLFCM YGYIGWTLLLSFTNSRFMPSYKWAGLSQYQRLWDNDRWWVASKNLLLFGGSFIAICLV LGVFLAVLLDQRIRREGFIRTLYLYPMALSMIVTGTAWKWLLNPGLGLDKLLRDWGWE GFRFDWLVDPERVVYCLVIAAVWQASGFVMALFLAGLRGVDPAIVRAAQVDGASLPTI YLRIVLPSLRPVFFSALMILAHIAIKSFDLVAAMTAGGPGYSSDLPAMFMYAHTFTRG QMGLGAASAMLMLGAVLAIVVPYLYSELRGKRHA" misc_feature complement(3579384..3580253) /locus_tag="PA3189" /note="ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpA; COG1175" /db_xref="CDD:440788" gene complement(3580384..3581646) /locus_tag="PA3190" /db_xref="GeneID:882901" CDS complement(3580384..3581646) /locus_tag="PA3190" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sugar ABC transporter substrate-binding protein" /protein_id="NP_251880.1" /db_xref="GeneID:882901" /translation="MNAIRRLSAVICLSSLCLSPLLAQAGEVEVLHWWTSAGEKRAAE TLKKLVEAKGHTWKDFAVAGGGGEAAMTVLKTRAVSGNPPAAAQIKGPDIQEWGELGL LADLNAVAAEGKWDSLLPKQVAQIMKYDGDYVAVPINVHRVNWLYINPEVFKKAGATP PTTLDELFVAADKLKAAGFTPLAHGSQPWQDGTVFENLVLSKMGPEGYRKAFVEQDKA TLTGAQMVEVFAALKKLRGYVDADAAGREWSAATAMVINGKAGMQIMGDWAKSEFTAA GKVPGKDYQCLPFPGTQKAFDYNIDSLVMFKLSNAENRKAQEDLARSVLDPSFQKDFN LNKGSIPVRLDADMAPFDSCAQQSMKDFKQASQDGNLVPSMAHSMAASSYVQGAIFDV VTNFFNDPAADPQKAAQQLAAAIEAAAQ" misc_feature complement(3580645..3581580) /locus_tag="PA3190" /note="ABC-type glycerol-3-phosphate transport system, periplasmic component [Carbohydrate transport and metabolism]; Region: UgpB; COG1653" /db_xref="CDD:441259" protein_bind complement(3581021..3581033) /locus_tag="PA3190" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3190" /bound_moiety="AmrZ" gene complement(3582171..3583592) /locus_tag="PA3191" /db_xref="GeneID:882906" CDS complement(3582171..3583592) /locus_tag="PA3191" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_251881.1" /db_xref="GeneID:882906" /translation="MPRSLLGRMLLLTLLAVLVAQGLSSLFWLSHLRSSQREGLLTSS RSLAYSMAASVSYFRSLPLGYRPLVLDQLRSMGGTRFFVSLNDRPLEMRALPDTPNKQ AVLEIVQDVLHQRLGKEVELQVEFVSPDELRLFNGALKLDELPRSWAHYALTLEPVNP PVLVTQIRIGESEWLYIASLMPAPYVSLEPEGLQPQQVLSIVFTSLLLLLFTGLLMHW QSRPLKRLARAARDLALGSPSAALEERGASELVEVARAFNTMHERIDRYLNERGQLFS AISHDLRTPITRLRLRVELLEDERLQEKFGRDLDELELLVKGALQCVKDTDIHENVES VDLNLLLQHIAEPYLADGRVEVVGRAAEPYPGKPLALKRCIGNLLDNALKYGERARLS LEDGPEAVVLHVDDDGPGVPEQRLEQIFEPRFRLSPRGQGYGLGLGIARNIAHTHGGE VSLQNRREGGLRVSLRLPRLGLE" misc_feature complement(3582189..>3582941) /locus_tag="PA3191" /note="osmolarity sensor protein; Provisional; Region: envZ; PRK09467" /db_xref="CDD:236531" gene complement(3583616..3584344) /gene="gltR" /locus_tag="PA3192" /db_xref="GeneID:882907" CDS complement(3583616..3584344) /gene="gltR" /locus_tag="PA3192" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component response regulator GltR" /protein_id="NP_251882.1" /db_xref="GeneID:882907" /translation="MSANGRSILLVDDDQEIRELLETYLSRAGFQVRSVSRGADFRQA LCEEEASLAILDVMLPDEDGFSLCRWIRSHQRLACMPIIMLTASSDEADRVIGLELGA DDYLGKPFSPRELLARIKALLRRAQFTQVRGGDVLAFEDWRLDTVSHRLFHEDGEEFF LSGADFALLKLFLDHPQQILDRDTIANATRGREVLPLERIVDMAVSRLRQRLRDTGKA PRLIQTVRGSGYLLAAQVRPHLQP" misc_feature complement(3583655..3584344) /gene="gltR" /locus_tag="PA3192" /note="osmolarity response regulator; Provisional; Region: ompR; PRK09468" /db_xref="CDD:181883" gene complement(3584379..3585374) /gene="glk" /locus_tag="PA3193" /db_xref="GeneID:882908" CDS complement(3584379..3585374) /gene="glk" /locus_tag="PA3193" /EC_number="2.7.1.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glucokinase" /protein_id="NP_251883.1" /db_xref="GeneID:882908" /translation="MNNDNKRSAGGLGLVGDIGGTNARFALWRGQRLESIEVLACADY PRPELAVRDYLARIGESVANIDSVCLACAGPVGAADFRFTNNHWVINRAAFREELGLD HLLLVNDFSTMAWAASRLGADELVQVRAGSAQADRARLIIGPGTGLGVGSLLPLGGGR WEVLPCEGGHVDLPVTSPRDFALWQGLQARYGHVSAERALSGNGLLALYEISCALDGV AVRASSAAEVGALAMAGDAQADAVLEHFFLWLARVAGNAVLTVGALGGVYITGGIVPR FLERFIASGFAEAFASRGKTSGAYLQDVPVWVMTAEHPGLLGAGVALQQALDAEG" misc_feature complement(3584397..3585341) /gene="glk" /locus_tag="PA3193" /note="glucokinase; Provisional; Region: glk; PRK00292" /db_xref="CDD:234716" gene complement(3585477..3587303) /gene="edd" /locus_tag="PA3194" /db_xref="GeneID:882909" CDS complement(3585477..3587303) /gene="edd" /locus_tag="PA3194" /EC_number="4.2.1.12" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phosphogluconate dehydratase" /protein_id="NP_251884.1" /db_xref="GeneID:882909" /translation="MHPRVLEVTRRIQARSAATRQRYLEMVRAAASKGPHRGTLPCGN LAHGVAACGESDKQTLRLMNQANVAIVSAYNDMLSAHQPFERFPGLIKQALHEIGSVG QFAGGVPAMCDGVTQGEPGMELSLASRDVIAMSTAIALSHNMFDAALCLGVCDKIVPG LLIGSLRFGHLPTVFVPAGPMPTGISNKEKAAVRQLFAEGKATREELLASEMASYHAP GTCTFYGTANTNQLLVEVMGLHLPGASFVNPNTPLRDELTREAARQASRLTPENGNYV PMAEIVDEKAIVNSVVALLATGGSTNHTLHLLAIAQAAGIQLTWQDMSELSHVVPTLA RIYPNGQADINHFQAAGGMSFLIRQLLDGGLLHEDVQTVAGPGLRRYTREPFLEDGRL VWREGPERSLDEAILRPLDKPFSAEGGLRLMEGNLGRGVMKVSAVAPEHQVVEAPVRI FHDQASLAAAFKAGELERDLVAVVRFQGPRANGMPELHKLTPFLGVLQDRGFKVALVT DGRMSGASGKVPAAIHVSPEAIAGGPLARLRDGDRVRVDGVNGELRVLVDDAEWQARS LEPAPQDGNLGCGRELFAFMRNAMSSAEEGACSFTESLNGWR" misc_feature complement(3585501..3587300) /gene="edd" /locus_tag="PA3194" /note="6-phosphogluconate dehydratase; Region: edd; TIGR01196" /db_xref="CDD:130264" gene 3587433..3588437 /gene="gapA" /locus_tag="PA3195" /db_xref="GeneID:882829" CDS 3587433..3588437 /gene="gapA" /locus_tag="PA3195" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glyceraldehyde 3-phosphate dehydrogenase" /protein_id="NP_251885.1" /db_xref="GeneID:882829" /translation="MTIRLAINGFGRIGRNVLRALYTGHYREQLQVVAINDLGDAAVN AHLFQYDSVHGHFPGEVEHDAESLRVMGDRIAVSAIRNPAELPWKSLGVDIVLECTGL FTSRDKAAAHLQAGAGKVLISAPGKDVEATVVYGVNHEVLRASHRIVSNASCTTNCLA PVAQVLHRELGIEHGLMTTIHAYTNDQNLSDVYHPDLYRARSATQSMIPTKTGAAEAV GLVLPELAGKLTGLAVRVPVINVSLVDLTVQVARDTSVDEVNRLLREASEGSPVLGYN TQPLVSVDFNHDPRSSIFDANHTKVSGRLVKAMAWYDNEWGFSNRMLDSALALAAARD " misc_feature 3587433..3588404 /gene="gapA" /locus_tag="PA3195" /note="Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]; Region: GapA; COG0057" /db_xref="CDD:439827" gene complement(3588741..3589271) /locus_tag="PA3196" /db_xref="GeneID:882830" CDS complement(3588741..3589271) /locus_tag="PA3196" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251886.1" /db_xref="GeneID:882830" /translation="MKETLNELITLISTGCMGAEEIRRIADEAAQAYADPAGFLAANP DINYDDSFPIPLGEWVVVGSLPDIVLFQADTYAELFARIVASFGKDVAFNIKPKQLLK TEPLVALNRIQVQLSSMYPEKGGYVLVDFSEPLDDELQAVLVYTQDLPRVMALCVEAG IYAAPAYESLRDAEAE" gene complement(3589352..3590350) /locus_tag="PA3197" /db_xref="GeneID:882389" CDS complement(3589352..3590350) /locus_tag="PA3197" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251887.1" /db_xref="GeneID:882389" /translation="MNLSDPHELATLLEGILLAAGKPLSLERLAELFDEAERPEPGQF RDALAILALSCAGRSFELKEVASGYRLQIRERFSPWVGRLWEERPQRYSRALLETLVL IAYRQPITRGEIEEIRGVAVNTQIVKTLMEREWIRIVGYREVPGRPAMLATTKAFLDY FNLKSLDELPPLSALREMEPEPEPPVEVAPAAQPPRDDLDEDAIPASIQALADRAIAE AGESLEEIEGEAGEPEKPREETSFRSLLLELDEMEQGLKTDFDDLLDPPEPSEQGDES AEPAAGPIPVVAEQAVEPAVAEAVAGADPDDEERALAEAMREEREALDADDDWPRR" misc_feature complement(3589823..3590338) /locus_tag="PA3197" /note="Chromosome segregation and condensation protein ScpB [Transcription]; Region: ScpB; COG1386" /db_xref="CDD:440996" gene complement(3590490..3591242) /locus_tag="PA3198" /db_xref="GeneID:882390" CDS complement(3590490..3591242) /locus_tag="PA3198" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251888.1" /db_xref="GeneID:882390" /translation="MEVFLEAFEGPLDLLLYLIRKQNIDILDIPVAEITRQYMGYVEL MKAVRLELAAEYLVMAAMLAEIKSRMLLPRSAEAEEEEEDPRAELIRRLQEYERFKKA AEDLDELPRVGRDVLVPAVAAPEARARKLLPELALQELMLVMGEMLRRADLFESHQVT REVLSTRERMSEVLERLKGGAFVPFIQLFTLEEGKLGVVVTFMAILELVKEQMVELVQ NEAFGAIHVRLRIAREAEEGETLEEALEDDFE" misc_feature complement(3590553..3591239) /locus_tag="PA3198" /note="Chromatin segregation and condensation protein Rec8/ScpA/Scc1, kleisin family [Replication, recombination and repair]; Region: ScpA; COG1354" /db_xref="CDD:440965" gene complement(3591415..3592044) /locus_tag="PA3199" /db_xref="GeneID:882531" CDS complement(3591415..3592044) /locus_tag="PA3199" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251889.1" /db_xref="GeneID:882531" /translation="MSQFFQIHPENPQPRLVKQAVEIVRQGGVIVYPTDSSYALGCRI GEKTAVDRIRRIRQLDDKHNFTLVCRDLSELGVYAKVDTGLFRLLKAHTPGPYTFILS ATREVPRMLLHPKRRTIGLRVPNCPIARALLEELGEPLMSVSLIMPGSGEPLNDPYEM RQVLEHQVDLIVDGGYGGGEASTVISLTDTDPEVIRVGCGDPAPFMQPA" misc_feature complement(3591427..3592044) /locus_tag="PA3199" /note="Carbamoyltransferase C-terminus; Region: Carbam_trans_C; cl00305" /db_xref="CDD:469714" gene complement(3592041..3592928) /locus_tag="PA3200" /db_xref="GeneID:882532" CDS complement(3592041..3592928) /locus_tag="PA3200" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251890.1" /db_xref="GeneID:882532" /translation="MRVDLHCHSTASDGVLAPAALVQRAHEKGVGLLALTDHDTLEGL PEAHQAAARLGIELVNGVELSCTWGGATIHVLGYGFDLDAAPLRQATEALHRGRWARA EEIDRRLAAKGMPGALEGARAIQQALGDSGNAPARPHFAEFLVQGGWVKDRADAFRKW LGAGKLGDVKQHWPTLEEVVGCLREARAWISLAHPYHYDFTRTKRRRLVADFLQAGGH AIEVVNGVQPAEQVGTLSILAREFGLMVTAGSDFHAPGDWSELGMYRAVPEDLPAMWP RFARHFRDTERHSEAKGAE" misc_feature complement(3592095..3592922) /locus_tag="PA3200" /note="3',5'-nucleoside bisphosphate phosphatase; Region: nside_bi_sphtase; NF041577" /db_xref="CDD:469462" gene 3593144..3593731 /locus_tag="PA3201" /db_xref="GeneID:882573" CDS 3593144..3593731 /locus_tag="PA3201" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="intracellular septation protein A" /protein_id="NP_251891.1" /db_xref="GeneID:882573" /translation="MKQFIDFIPLILFFIVYKIDPQNVEFAGFNLSGIYGATATLILA SVIVYGALWLKHRHLEKSQWFTLGACLVLGGLTLAFHEDTFLKWKAPLVNWLFALAFA GSHFIGDKPMIQRIMGHAIQLPQGLWVRLNIAWVVFFLVCGFANLYVVFTYPNFWVDF KVFGSLGMTLLFLIGQGLFLARHLHDADTGEKPKD" misc_feature 3593144..3593707 /locus_tag="PA3201" /note="intracellular septation protein A; Reviewed; Region: PRK00259" /db_xref="CDD:234704" gene 3593733..3594032 /locus_tag="PA3202" /db_xref="GeneID:882574" CDS 3593733..3594032 /locus_tag="PA3202" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251892.1" /db_xref="GeneID:882574" /translation="MLYAIIARDIPASQERRLASRPAHLARLEQLKEEGRLVLAGPHP AIDSNDPGAAGFTGSLIVAEFDSLAAAQSWAEADPYRAAGVYAEVVVKPFKKVLP" misc_feature 3593733..3594029 /locus_tag="PA3202" /note="YciI family protein; Region: PRK11370" /db_xref="CDD:183103" gene 3594208..3594570 /locus_tag="PA3203" /db_xref="GeneID:882543" CDS 3594208..3594570 /locus_tag="PA3203" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251893.1" /db_xref="GeneID:882543" /translation="MMRPSAAHCLLLSLGASLALAEEPAPAPIPAAQPSITQATAELE RRLVETERQRDELVSRMRQENRQLREQLQAAQAQRQPPLLTEEQTWYVAGAATALLAF VLGALSRGRRRQRREWIN" gene 3594581..3595258 /locus_tag="PA3204" /db_xref="GeneID:882544" CDS 3594581..3595258 /locus_tag="PA3204" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_251894.1" /db_xref="GeneID:882544" /translation="MSELLLIDDDRELCELLGTWLVQEGFSVRASHDGAQARRALAEQ TPDAVVLDVMLPDGSGLELLKQLRGDHPDLPVLMLSARGEPLDRILGLELGADDYLAK PCDPRELTARLRAVLRRTHPAQPSAQMQLGDLSLNLTRGVAQIDGQEISLTLSESRIL EALLRQPGEPLDKQALAQLALGRKLTLYDRSLDMHVSNLRKKLGSHPDGSPRILALRG RGYYYSH" misc_feature 3594581..3595192 /locus_tag="PA3204" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" gene 3595387..3595827 /locus_tag="PA3205" /db_xref="GeneID:882545" CDS 3595387..3595827 /locus_tag="PA3205" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251895.1" /db_xref="GeneID:882545" /translation="MRKTLTALFIAAALPTFAMAAPAANDLPPPPMEGGHMMGQHGPR HGGPMKELDLTREQRQQMGKLMGEQMKARHEITQRYLAKLPAAEQKALKDELKASHEK TQKDIRALLTPEQQKKFDELQKKREQRKAEWAEFQQWKADKKSN" misc_feature 3595387..3595782 /locus_tag="PA3205" /note="CpxP component of the bacterial Cpx-two-component system and related proteins; Region: CpxP_like; cl01482" /db_xref="CDD:470220" gene 3595942..3597279 /locus_tag="PA3206" /db_xref="GeneID:882546" CDS 3595942..3597279 /locus_tag="PA3206" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_251896.1" /db_xref="GeneID:882546" /translation="MRSLFWRILAAFWLALLLVAGLSILLGRALNQDTWIIARHPGLK DLAEQWTALYEEQGSYAAQGLLEQRRRDYGISIQVLDESGQRLVDGTYLPRPHHRPPR TSDRNLPRFPWRQLSQEYVSPQSNHTYLFIYRIPHPELEAWHRGSLLWPLSALGIALV VLTLFSLLLTLSITRPLNRLRRAVHDLGQTAYQKDSLARLARRGDELGTLARDFNRMG ERLQSLIGSQRQLLRDVSHELRSPLARLRIALALAERAEPEARAQMWPRLEQECDRLE ALIGEILALARLDAEPGASQRIALLPLLQRLREDALLLAPEQDIRLEVAPDLSIDGWP DMFERAVDNLLRNAVRFNPVGQPLEVRASSAGDYLRLSVRDHGPGIAAELQEQLGEPF FRAPNQSSPGHGLGLAIARRAIERHGGHLRLGNHPDGGFIATLSLPLRRKATE" misc_feature 3595942..3597231 /locus_tag="PA3206" /note="Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms]; Region: COG4251" /db_xref="CDD:443393" misc_feature 3596596..3597264 /locus_tag="PA3206" /note="K+-sensing histidine kinase KdpD [Signal transduction mechanisms]; Region: KdpD; COG2205" /db_xref="CDD:441807" gene 3597319..3597798 /locus_tag="PA3207" /db_xref="GeneID:882537" CDS 3597319..3597798 /locus_tag="PA3207" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251897.1" /db_xref="GeneID:882537" /translation="MTLPASLFLDERPLAQAIAPPPEPPGDEPQSLVLAVELGQVAQQ LRHRWARLDLNLPERGTWPLESWRPALHEALYGLLGGAAQARPWQRITLNPALDARHG RLRLDILGQAEEGRRWLPAAVEAARRLAGWQGGRLLWHAQGAYWCVRLLLPLSPARR" gene complement(3597779..3598339) /locus_tag="PA3208" /db_xref="GeneID:882538" CDS complement(3597779..3598339) /locus_tag="PA3208" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251898.1" /db_xref="GeneID:882538" /translation="MEALDALLTRVSHARLSDPAPSPEQLDRLFRVALRAPDHGQLRP WRFILVEGEGRRALGDLYARALASRQPDAAEEALAKARNMPLRAPLLVVAVACLQDHP KVPHAEQLLAAGCAAHGLVLGAYAQGLGAMWRTGEMATDPVVHAGLGLGEQERIIGFV YLGTPMGELRTPAELDPTAFVSAWPG" misc_feature complement(3597794..3598339) /locus_tag="PA3208" /note="nitroreductase family protein; Region: Nitro_FMN_reductase; cl00514" /db_xref="CDD:444950" misc_feature complement(order(3597869..3597871,3597875..3597877, 3597896..3597901,3597935..3597937,3597941..3597943, 3597959..3597964,3597971..3597976,3597983..3597988, 3597995..3598000,3598007..3598012,3598016..3598021, 3598190..3598207,3598211..3598213,3598223..3598225, 3598229..3598240,3598244..3598252,3598256..3598261, 3598310..3598312,3598316..3598324,3598328..3598330)) /locus_tag="PA3208" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:380312" misc_feature complement(order(3597932..3597946,3598004..3598009, 3598016..3598018,3598223..3598231,3598235..3598237, 3598304..3598312)) /locus_tag="PA3208" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:380312" gene complement(3598404..3598775) /locus_tag="PA3209" /db_xref="GeneID:882535" CDS complement(3598404..3598775) /locus_tag="PA3209" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251899.1" /db_xref="GeneID:882535" /translation="MSTDNPCLTCGACCAHFRVSFYWGECRSAGGVVPDELTVRISPQ MVAMSGTENKPARCVGLLGEVGCGVRCTVYEQRSSTCREFEAAWANGQPNPACDAARA AYGLPPLTPPLQPHLAPGRVA" misc_feature complement(3598461..3598766) /locus_tag="PA3209" /note="Uncharacterized protein YkgJ, contains CxxCxxCC motif [General function prediction only]; Region: YkgJ; COG0727" /db_xref="CDD:440491" gene 3598933..3600387 /gene="trkH" /locus_tag="PA3210" /db_xref="GeneID:882536" CDS 3598933..3600387 /gene="trkH" /locus_tag="PA3210" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="potassium uptake protein TrkH" /protein_id="NP_251900.1" /db_xref="GeneID:882536" /translation="MALPTLRILGFIIGIFLITLAASMLVPILTMLAFDRTEGIQAFI WSSVATFVTGLGLVLPGRPEHVHLRPRDMYMLTVSSWVLVCIFAALPFVLQQHISYTD AFFESMSGITATGSTVLSGLDDMSPGILIWRSLLHWLGGIGFIAMAVAILPMLRIGGM RLFQTESSDRSEKVLPRSHMVAKYIVATYVGITLLGSLAFWGAGMSPFDAVNHAMSAI STGGFSTSDQSLAKWKQPAVHWTAVVVMILGSLPFALYVATLRGHRKALIKDQQVRGL LGLLLVTWLLMGTWYAVTSKLPWMDAFRIVAVNVTSVVTTTGFALGDYSMWGHFSIML FFYLGFIGGCSGSTAGGIKIFRFQVAYTLLKANLYQLIHPRAVLKQNYNGHRLDEEIV RSILTFSFFFAIVVCLLALGLSLIGLDWMTALTGAASTVAGVGPGMGPIIGPSGNFAS LPDAAKWLLAAGMLLGRLEIITVLVLLTPAFWRH" misc_feature 3599137..3600381 /gene="trkH" /locus_tag="PA3210" /note="Trk-type K+ transport system, membrane component [Inorganic ion transport and metabolism]; Region: TrkG; COG0168" /db_xref="CDD:439938" gene 3600454..3601599 /locus_tag="PA3211" /db_xref="GeneID:882550" CDS 3600454..3601599 /locus_tag="PA3211" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_251901.1" /db_xref="GeneID:882550" /translation="MTTQPQPGHVSLDSSTQPARVRAIGDWTLAHYTALEREVTRLRS EVAANVSFDLSQLGALDTAGAALLAELLGAERLADLAELEPGLPRERQALLKTVGHAL HDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKALLGFIGLTLETLFRSLVRPASWR VTPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLRE FAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLP MLTFVGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAV IGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALLFMEMGW" misc_feature 3600856..3601551 /locus_tag="PA3211" /note="Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla [Cell wall/membrane/envelope biogenesis]; Region: MlaE; COG0767" /db_xref="CDD:440530" gene 3601596..3602390 /locus_tag="PA3212" /db_xref="GeneID:882551" CDS 3601596..3602390 /locus_tag="PA3212" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_251902.1" /db_xref="GeneID:882551" /translation="MNQDNPQAIIQVRDLCNRFGAQAVHEHLDLDVRRGEILGVVGGS GTGKSVLLRSIVGLRRPTSGSVRVFGEDLLQLPEERRSLVERRFGVLFQQGALFSSLT VVENVALPLIENAGLPRADAEHLAQVKLALAGLPANAGDKYPASLSGGMIKRAALARA LALDPDILFLDEPTAGLDPIGAAAFDNLIRTLRDALGLTVFLVTHDLDTLYTICDRVA VLSQKKVLVVDTLERVAATDDAWVREYFHGPRGRAAHQAAAVPENH" misc_feature 3601611..3602333 /locus_tag="PA3212" /note="ATPase subunit MlaF of the ABC-type intermembrane phospholipid transporter Mla [Cell wall/membrane/envelope biogenesis]; Region: MlaF; COG1127" /db_xref="CDD:440744" gene 3602392..3603330 /locus_tag="PA3213" /db_xref="GeneID:882539" CDS 3602392..3603330 /locus_tag="PA3213" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251903.1" /db_xref="GeneID:882539" /translation="METRAHHVLIGLFSVIVIGAALLFGLWLAKSGSEGKFNYYDIVF NEAVSGLSQGSSVQYSGIKVGDVAFLRLDPKDPRKVWARIRVVASAPIKQDTTAKLAL TGITGTSIIQLSSGTPASPMLEGKDGKIPVIVATPSPLTQLLSNGEDLMGNINQLIAR FSNLLSEENTARISRTLDHLDQATGALSAERENVSAVMQQLAQASRQANAALAQASEL MRSANGLLNEQGKGMLENANKTMASLERTSATLDQLISENRHSLDGGIQGLAELGPAV SELRDTLAALRGISRRLEENPANYLLGREKTKEFTP" misc_feature 3602392..3603309 /locus_tag="PA3213" /note="Periplasmic subunit MlaD of the ABC-type intermembrane phospholipid transporter Mla [Cell wall/membrane/envelope biogenesis]; Region: MlaD; COG1463" /db_xref="CDD:441072" gene 3603327..3603971 /locus_tag="PA3214" /db_xref="GeneID:882540" CDS 3603327..3603971 /locus_tag="PA3214" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251904.1" /db_xref="GeneID:882540" /translation="MRLALRPLRRLSLAAGLAALATLGACSILPEAQVLQVYLLPVHN PPASAAARPVDWSLRIARPRTSLVLESPRIAVRPHGDEISVYQGARWSDPAPSLLRDR LMQAFQADGRVRGLSSDDSNLQADFELGGDLRAFQTEYPNGQASALIRYDARLVRTDD KRVVASRRFEVSQPVDGKKVAAVVSAFGKAGDTLSAQVLDWTLRQASAQPAVQP" misc_feature 3603402..3603947 /locus_tag="PA3214" /note="ABC-type uncharacterized transport system, auxiliary component [General function prediction only]; Region: COG3218" /db_xref="CDD:442451" gene complement(3603994..3605007) /locus_tag="PA3215" /db_xref="GeneID:882541" CDS complement(3603994..3605007) /locus_tag="PA3215" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251905.1" /db_xref="GeneID:882541" /translation="MPERTTLSSWVQGIVLALELEGLDGRQLFAELGLDYQALQDPDA RFPQDAMSRLWQRAVALSGNPAIALNIARVRRPAFHVVGYALMSSRNLAEGFARLERY QRIIAEASDLTFRRTPQGYRIGVTVHGDRLPAPPQSAECSLAYLVDMVRWITGRSLDP LAVELPGAPREPLAPYVELFRAPLRFHAEEFALVFSRVDLETPLPSANEALAQLHDRF AGEYLARFSTSRITHLTRQTLCRLLPQGEPKRERVAQALHLSQRTLQRRLQEEGTSYQ QLLDDTRRDMAEQYLQQPGLTLLEVAYLLGFADPSNFFRAFRRWFGCTPNEYRARRQE RPG" misc_feature complement(3604396..3604944) /locus_tag="PA3215" /note="Arabinose-binding domain of AraC transcription regulator, N-term; Region: Arabinose_bd; pfam12625" /db_xref="CDD:432679" misc_feature complement(3604021..3604269) /locus_tag="PA3215" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" protein_bind complement(3604632..3604644) /locus_tag="PA3215" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3215" /bound_moiety="AmrZ" gene 3605150..3605467 /locus_tag="PA3216" /db_xref="GeneID:882542" CDS 3605150..3605467 /locus_tag="PA3216" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251906.1" /db_xref="GeneID:882542" /translation="MSSPDDERFHSFAEFYPYYLQEHSNAVCRRLHYVGSLLVLAVLF HAVASQQWLWLLALPLVGYGFAWVGHFVFEKNRPATFKYPLWSFMGDWVMLKDAFTGR IRF" misc_feature 3605162..3605464 /locus_tag="PA3216" /note="Uncharacterized conserved protein, DUF962 domain [Function unknown]; Region: COG4323" /db_xref="CDD:443464" gene 3605684..3607075 /gene="cyaB" /locus_tag="PA3217" /db_xref="GeneID:882555" CDS 3605684..3607075 /gene="cyaB" /locus_tag="PA3217" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="protein CyaB" /protein_id="NP_251907.1" /db_xref="GeneID:882555" /translation="MKPTLPDRSPTSRSVASMREYYSRVLAYIACGASIAAGTYTQYF SYGILWMVPYALLYPHLAYHLGQRFRQHDPRKVTRALLAVDAVHCGLGMALLGFSVVP SLMFLLVLSFTALVIGGLRLLGMALLVSASSALLVAVLVAPPLLGNTPVEVAAVSILF CGLYICITAFFGHQQGLRLAQVRQEIAREQEKAARLARNLAKYLSPQVWEMIFSGKKS VRLETQRKKLTVFFSDIRGFTELSEELEAEALTDLLNNYLNEMSKIALKYGGTIDKFV GDCVMVFFGDPSTQGAKKDAVAAVSMGIAMRKHMKVLRQQWRAQGITKPLEIRMGINT GYCTVGNFGADTRMDYTIIGREVNLASRLESASEAGEILISHETYSLIKDVIMCRDKG QIAVKGFSRPVQIYQVVDSRRDLGAAPSYVEHELPGFSMYLDTNNIQNYDKERVIQAL QQAAERLRDKVIL" misc_feature 3605738..3606007 /gene="cyaB" /locus_tag="PA3217" /note="MASE2 domain; Region: MASE2; pfam05230" /db_xref="CDD:428382" misc_feature 3605876..3606925 /gene="cyaB" /locus_tag="PA3217" /note="Adenylate cyclase, class 3 [Signal transduction mechanisms]; Region: AcyC; COG2114" /db_xref="CDD:441717" gene complement(3608117..3608929) /locus_tag="PA3219" /db_xref="GeneID:882547" CDS complement(3608117..3608929) /locus_tag="PA3219" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251909.1" /db_xref="GeneID:882547" /translation="MSTAQRFTSNRKQRVRTLWISDVHLGTRDCQAEHLAAFLKRYHA DRIYLVGDIIDGWKLRGGIYWPQAHTNVIRRLLTLSKRGTEVIYVTGNHDEFLRRYSS LILGNIRLVDEAVHSTADGRKLLVIHGDQFDVITRYHRWLAFLGDSAYEFTLLLNRWL NHWRRRWGYGYWSLSAYLKHKVKTAVNFISDFEEAIAHECHKRGLDGVVCGHIHHAEI RRIEGVDYLNCGDWVESCTALIEHWDGSIQLYRLAEEQARLAAQAAAVEPAA" misc_feature complement(3608234..3608878) /locus_tag="PA3219" /note="Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain; Region: MPP_YbbF-LpxH; cd07398" /db_xref="CDD:277343" misc_feature complement(order(3608288..3608290,3608294..3608296, 3608546..3608548,3608651..3608656,3608774..3608776, 3608858..3608860,3608864..3608866)) /locus_tag="PA3219" /note="putative active site [active]" /db_xref="CDD:277343" misc_feature complement(order(3608288..3608290,3608294..3608296, 3608546..3608548,3608654..3608656,3608774..3608776, 3608858..3608860,3608864..3608866)) /locus_tag="PA3219" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:277343" gene 3609076..3609840 /locus_tag="PA3220" /db_xref="GeneID:882548" CDS 3609076..3609840 /locus_tag="PA3220" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251910.1" /db_xref="GeneID:882548" /translation="MGSILSLRHYSHDQIVHSHDHAQLVLGLSGCLDFEVEGRGSRVL RQTFAVVPAQARHACSSPSGSRCLVLDLPCDGSLLLGLGEHAEAGRRLFERPQALSLT PAQGQLVNWLASGPINDPVIAHQGAGLLLASLASERQPPRQQPRLPLASLDAYLDRHA AHPLQVADLARLAGLSVARFHSLFLAETGQTPMDYARSRRLHQAHELLLESSLAVGEI AARVGYASQSAFTAALVREFGVTPRQLRRESRDKTG" misc_feature 3609097..3609294 /locus_tag="PA3220" /note="Bacillus subtilis YobQ and related proteins, N-terminal cupin domain; Region: cupin_YobQ-like_N; cd07003" /db_xref="CDD:380407" misc_feature 3609562..3609813 /locus_tag="PA3220" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene 3609905..3610240 /gene="csaA" /locus_tag="PA3221" /db_xref="GeneID:882552" CDS 3609905..3610240 /gene="csaA" /locus_tag="PA3221" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="molecular chaperone CsaA" /protein_id="NP_251911.1" /db_xref="GeneID:882552" /translation="MDIIEWQDFERVELRVGTILSAAPNPKARKPAYVLEVDLGPLGL RTSSAQLTAHYQAEQLVGRQVLCVCNFAPKQIAGVRSEVLVTGVYDSEDKVVLAGFDK PLPNGARLA" misc_feature 3609905..3610237 /gene="csaA" /locus_tag="PA3221" /note="chaperone CsaA; Region: PRK10089" /db_xref="CDD:182232" misc_feature order(3609917..3609928,3609932..3609940,3609950..3609952, 3610064..3610069,3610091..3610093,3610112..3610117, 3610160..3610171,3610187..3610189,3610193..3610201, 3610205..3610210,3610214..3610216,3610229..3610234) /gene="csaA" /locus_tag="PA3221" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:239197" misc_feature order(3609995..3609997,3610034..3610036,3610112..3610114, 3610124..3610126,3610145..3610147,3610154..3610156) /gene="csaA" /locus_tag="PA3221" /note="putative tRNA-binding site [nucleotide binding]; other site" /db_xref="CDD:239197" gene 3610250..3611149 /locus_tag="PA3222" /db_xref="GeneID:882553" CDS 3610250..3611149 /locus_tag="PA3222" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251912.1" /db_xref="GeneID:882553" /translation="MNRRSALAALHGGALLFGLTGVFGKLASASPGVIVFGRALFAVL ALGLFARLAGQAWRALGPAQWLRLALCGLLLAGHWVSFFIAVKTAGVAIATLGFASFP AFTVILEGLLFRERIHLAEGLLVVLVSLGLVLVTPNFDLASGATLGLLWAILSGLLFA LLSLANRSNSGQVGPVQAALWQNLVVALCLLPFAVSELPALPALDWLWLALLGVFCTG LAHSLFVASLAVVKARTAALVFALEPVYGIAFAWLLFHETPGPRMFLGGALIILAIVL SARLGARGRKTAVGDERGDPERA" misc_feature 3610256..3611107 /locus_tag="PA3222" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene complement(3611254..3611895) /gene="azoR3" /locus_tag="PA3223" /db_xref="GeneID:882554" CDS complement(3611254..3611895) /gene="azoR3" /locus_tag="PA3223" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="FMN-dependent NADH-azoreductase" /protein_id="NP_251913.1" /db_xref="GeneID:882554" /translation="MSRVLVIESSARQRGSVSRLLTAEFISHWKIAHPADRFQVRDLA REPLPHLDELLLGAWTTPCDGHSAAERRALERSNRLTEELRMADVLVLAAPMYNFAIP SSLKSWFDHVLRAGLTFRYAEQGPEGLLQGKRAFVLTARGGIYAGGGLDHQEPYLRQV LGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR" misc_feature complement(3611293..3611895) /gene="azoR3" /locus_tag="PA3223" /note="FMN-dependent NADH-azoreductase [Energy production and conversion]; Region: AzoR; COG1182" /db_xref="CDD:440795" gene complement(3612042..3612359) /locus_tag="PA3224" /db_xref="GeneID:882529" CDS complement(3612042..3612359) /locus_tag="PA3224" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251914.1" /db_xref="GeneID:882529" /translation="MKRLCCFALSLLPLSAFAYPIEVDPQLNGTEVSYSTQDIGRDMG AILLTNLGGQAAECTAVFRNGPETPKVRKGVIQPGQNSNFTAQFGRDIIKLRIKLTCK IAK" gene 3612559..3613488 /locus_tag="PA3225" /db_xref="GeneID:882530" CDS 3612559..3613488 /locus_tag="PA3225" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251915.1" /db_xref="GeneID:882530" /translation="MKAPRVTLDQWRTLQAVVDHGGFAQAAEALHRSQSSISYTVARM QEQLGVPLLRIDGRKAVLTEAGEVLLRRSRQLVKQAGQLEELAHHMEQGWEPEVRLVV DAAYPTARIVRSLSAFMPQSRGCRVLLREEVLSGVEEALIQGAADLAISGLIIPGHLG ADLSVVEFVAVAHPDHPLHRLQRELTHQDLETQMQVVIRDSGRLQPRDHGWLGAEQRW TVGSLATAATFVGNGLGFAWLPRHIIERELQSGQLKPLPLSQGGVRQSRFYLYTNKEK PLGPASQILMEMLKSFANVPLNAPFAAPEPAAE" misc_feature 3612577..3613437 /locus_tag="PA3225" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 3613495..3614322 /locus_tag="PA3226" /db_xref="GeneID:882463" CDS 3613495..3614322 /locus_tag="PA3226" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_251916.1" /db_xref="GeneID:882463" /translation="MPDFQHRDCTLVYDDHPGPTERAPVLLLHGLGSSARDWEYQLPA LLGRYRLLVPDLRGHGRSGKPRGGYSMAGFAEDCAALLDRLGCGPVHLVGISMGGMIG FQLACDRPDLLRSLTIVNSTPEVIPRKPREHLEVAKRKLLSRLLSLRTIGRALGRLLF PKAEQAGLREKIEARWAENDKRAYLASLDAIIGWGVQERLAEIACPTLVISADRDYTP VSLKQAYCERIADARLVVVEDSRHATPMDQPEIFNTTLLGFLADIDKTKEQPCSNVS" misc_feature 3613564..3614277 /locus_tag="PA3226" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene 3614304..3614867 /gene="ppiA" /locus_tag="PA3227" /db_xref="GeneID:882464" CDS 3614304..3614867 /gene="ppiA" /locus_tag="PA3227" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase A" /protein_id="NP_251917.1" /db_xref="GeneID:882464" /translation="MLKRLLIAACTLLFAGSLLAATPAAKPHVLIATSLGEIEVELDP AKAPISVKNFLEYVDSGYYDGTLFHRVIPGFMVQTGGFSAGMQEKKTRAPIKNEADNG LLNERGTLAMARTGVVDSATSQFFINLTDNDFLNHGARDFGYAVFGKVVRGMGVVDQI AKVPTTRRNGFADVPSDDVVILSAKRL" misc_feature 3614304..3614864 /gene="ppiA" /locus_tag="PA3227" /note="cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug...; Region: cyclophilin; cl00197" /db_xref="CDD:469651" misc_feature order(3614511..3614513,3614517..3614519,3614526..3614531, 3614535..3614537,3614640..3614657,3614679..3614681, 3614703..3614708,3614733..3614735) /gene="ppiA" /locus_tag="PA3227" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238901" gene 3614930..3616762 /locus_tag="PA3228" /db_xref="GeneID:882399" CDS 3614930..3616762 /locus_tag="PA3228" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein/permease" /protein_id="NP_251918.1" /db_xref="GeneID:882399" /translation="MLYRRFERLIDPFRSASERMPPSEVLRFYVYFLRQVWPVFLALL VVGLIVALIEVALFSYLGRIVDLAQSTPSAEFFRVHANELIWMAVVALVLRPLFNALH DMLVHQSINPSMTNLIRWQNHRYVLKQSLGFFQNDFAGRIAQRIMQTGNSLRDSAVQV VDALWHVLIYTVSALVLFAEADWRLMIPLVLWVFAYVGALAYFVPQVKRRSVEASDSR SKLMGRIVDGYTNITTLKLFAHTRQEEDYAREAIGDQTLKSQRAGRVVTSMDVTITVM NGVLITGTTGLALWLWSQELISVGAIALATGLVIRINNMSGWIMWVVGGIFENIGQVQ DGMQTIALPRKVVDREDAQPLRVERGEVEFEHIAFHYGKGSGVIQGLDLKVRPGEKIG LVGPSGAGKSTLVNLLLRLYDLESGRILVDGQDIAGVTQESLRAQIGMVTQDTSLLHR SIRDNLLYGRPGASDAELMEAVRKARADEFIPLLSDAEGRRGFDAHVGERGVKLSGGQ RQRIAIARVLLKDAPILILDEATSALDSEVESAIQESLETLMQGKTVIAIAHRLSTIA RMDRLVVLDKGHIAESGTHAELLAHGGLYARLWQHQTGGFVGVD" misc_feature 3614993..3616744 /locus_tag="PA3228" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:440747" gene 3617044..3617310 /locus_tag="PA3229" /db_xref="GeneID:882400" CDS 3617044..3617310 /locus_tag="PA3229" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251919.1" /db_xref="GeneID:882400" /translation="MKLASVVSAVITSLAPMAFAQDVDKDPGRGLPVEEYHYGMQLDV KNVLHRTDNSTRTGVVPVTVVYEDHSGELHKIRFLEWGGSTSNG" misc_feature 3617071..3617301 /locus_tag="PA3229" /note="Protein of unknown function (DUF2790); Region: DUF2790; pfam10976" /db_xref="CDD:431571" gene complement(3617343..3618467) /locus_tag="PA3230" /db_xref="GeneID:882391" CDS complement(3617343..3618467) /locus_tag="PA3230" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251920.1" /db_xref="GeneID:882391" /translation="MPIQTLATLADIDAAEWDALLPPAQPFLRHAFLSALEDSHSVTP ATGWRPAHRVLRDPQGRLCAALPAYVKAHSYGEYVFDWSWADACQRAGIRYYPKLLVG VPFTPVAGARLLGEDEGLQGLLASLGEEAEASGLSSIHVNFTDARADTLLAARDGWLE RLGCQYHWHNRGYRDFQDFLEALSSRKRKQLRKEREQVGGQGIEFEWREGGQLSELEW DFVYLCYANTYLVRDRDPYLSREFFGLLAERMPEAIRVVFAHQRGKPVAMAFSLVAGD TLYGRYWGCLAEFDRLHFETCFYQGLEFAIGAGLARFDAGAQGEHKLIRGFEPVLTRS WHYLAHPGLRDAVAQFLEQERAGVRAYAEEAHGLLPYRQA" misc_feature complement(3617346..3618467) /locus_tag="PA3230" /note="Predicted N-acyltransferase [General function prediction only]; Region: COG3146" /db_xref="CDD:442380" gene complement(3618726..3618884) /locus_tag="PA3231" /db_xref="GeneID:882392" CDS complement(3618726..3618884) /locus_tag="PA3231" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251921.1" /db_xref="GeneID:882392" /translation="MSLGTILLIILILLLIGGLPVFPHSRNWGYGPSGIIGALLVVLL VLLLLGMI" misc_feature complement(<3618774..>3618827) /locus_tag="PA3231" /note="Protein of unknown function (DUF3309); Region: DUF3309; pfam11752" /db_xref="CDD:432049" gene complement(3618993..3619619) /locus_tag="PA3232" /db_xref="GeneID:882393" CDS complement(3618993..3619619) /locus_tag="PA3232" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit epsilon" /protein_id="NP_251922.1" /db_xref="GeneID:882393" /translation="MNTMVKLPDSRWPGWRRRLYWWMHEAVEAEEVISLDLETTSLDP RRADILSIGAVLVRRGKLVMGERLELYVEPPPSLDAESIRIHKLRRADLEGQLQLEQA LRQVLAFIGDRPLLGYYLSFDVAVLNRHLRQLLDRQLHNPSIEISSLYHRKVSRHFPD AHIDLRFDTLARALDVPVSGRHTALGDAQAVALMFMRLLKGPAPKVIH" misc_feature complement(3619011..3619586) /locus_tag="PA3232" /note="3'-5' exonuclease; Region: PRK09145" /db_xref="CDD:236391" misc_feature complement(order(3619059..3619061,3619074..3619076, 3619251..3619259,3619263..3619268,3619497..3619499, 3619503..3619514)) /locus_tag="PA3232" /note="active site" /db_xref="CDD:176648" misc_feature complement(order(3619059..3619061,3619074..3619076, 3619254..3619259,3619263..3619268,3619497..3619499, 3619503..3619514)) /locus_tag="PA3232" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:176648" misc_feature complement(order(3619059..3619061,3619074..3619076, 3619251..3619253,3619506..3619508,3619512..3619514)) /locus_tag="PA3232" /note="catalytic site [active]" /db_xref="CDD:176648" gene complement(3619616..3621415) /locus_tag="PA3233" /db_xref="GeneID:882394" CDS complement(3619616..3621415) /locus_tag="PA3233" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251923.1" /db_xref="GeneID:882394" /translation="MPDSFNFASPPFDQLRPHQRETLKQALSVGYYAPGETLLEAGSA VPGLFVLLKGVVEERGDDGRVFAQYAADDLFDVRGLFSGSSKHRYLAIEESIVYELPA SCFHQLCGENPGFARFFQADLAAKRQLAQRDGQNLAEFILTRIAREHLLPALEVEASL SLGDAARLQLSHGADALLVRLERDGPELGIVTRTDLMSAHFRDGRSELEAIGPLAHGP LASVELGDFLFDAMILMTRQRIERVAVTEDGQVIGLLHLTQVLSLFSTHSHVLALRIA RADDLGDLRRCAETLDTLIATLAGNGIRLRFIMQLVSALNEQLLERLFELLLPPTLRG RCCLLVMGSEGRGEQLLKTDQDNALVLADDLPQEQALAMMQRFSAALLEFGYPPCPGG VMASRPEWCKPLAAWQAELRGTLLEGKPEQLLRLSILADAWPVAGNLQLFEPLRWQLR GFADGGERWLADIAAAALQFDTPLTFLGQLKTQDARLDLKRGGIFPIVHGIRTLALRE GLETRGTLARIEALKRHKVLEARLADDLSESFELFLQLRLTRQLAGQRDGRQQGLDVS GMSRHDRDMLRYGLHVVKKFKQSVARQFHLETR" misc_feature complement(3621059..3621385) /locus_tag="PA3233" /note="effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO...; Region: CAP_ED; cd00038" /db_xref="CDD:237999" misc_feature complement(order(3621152..3621160,3621185..3621190)) /locus_tag="PA3233" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:237999" misc_feature complement(order(3621071..3621079,3621089..3621097)) /locus_tag="PA3233" /note="flexible hinge region; other site" /db_xref="CDD:237999" misc_feature complement(3620627..3620971) /locus_tag="PA3233" /note="Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the bacterial CAP_ED (cAMP receptor protein effector domain) family of transcription factors, the NT (Nucleotidyltransferase) Pol-beta-like domain, and the DUF294 dom; Region: CBS_pair_CAP-ED_NT_Pol-beta-like_DUF294_assoc; cd04589" /db_xref="CDD:341365" misc_feature complement(order(3620630..3620632,3620639..3620644, 3620648..3620650,3620654..3620656,3620690..3620692, 3620882..3620890,3620954..3620962,3620966..3620968)) /locus_tag="PA3233" /note="putative ligand binding site II [chemical binding]; other site" /db_xref="CDD:341365" misc_feature complement(3620771..3620968) /locus_tag="PA3233" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341365" misc_feature complement(order(3620642..3620644,3620684..3620692, 3620756..3620758,3620822..3620824,3620831..3620836, 3620846..3620848,3620888..3620890)) /locus_tag="PA3233" /note="putative ligand binding site I [chemical binding]; other site" /db_xref="CDD:341365" misc_feature complement(3620630..3620758) /locus_tag="PA3233" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341365" misc_feature complement(3620153..3620551) /locus_tag="PA3233" /note="Putative nucleotidyltransferase DUF294; Region: DUF294; pfam03445" /db_xref="CDD:460919" misc_feature complement(3619634..3620044) /locus_tag="PA3233" /note="Putative nucleotidyltransferase substrate binding domain; Region: DUF294_C; pfam10335" /db_xref="CDD:463050" gene complement(3621505..3623160) /locus_tag="PA3234" /db_xref="GeneID:882395" CDS complement(3621505..3623160) /locus_tag="PA3234" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetate permease" /protein_id="NP_251924.1" /db_xref="GeneID:882395" /translation="MIARLLAALGLAAFAPALWADALTGDVQRQPLNVSAIVMFVAFV GATLCITYWASKRNRSAADYYAAGGRITGFQNGLAIAGDYMSAASFLGISALVFTSGY DGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLKQKQIRTLSACGSLVVVA FYLIAQMVGAGKLIELLFGLNYHVAVVLVGILMVLYVLFGGMLATTWVQIIKAVLLLS GASFMAIMVLKHVNFDVSTLFSEAIKVHPKGEAIMSPGGLVKDPISAFSLGFALMFGT AGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIGFGAILLVSTNPDFKDAT GALIGGNNMAAVHLADAVGGSLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASV FKGGKANEKDELRVSKMTTVALGVVAIVLGILFEKQNIAFMVGLAFSIAASCNFPVLL LSMYWKKLTTRGAMIGGWMGLITAVGLMVLGPTIWVQILGHEKAIYPYEYPALFSMIV AFVGIWFFSITDKSAAADEERARFFPQFIRSQTGLGASGAVAH" misc_feature complement(3621508..3623160) /locus_tag="PA3234" /note="cation/acetate symporter ActP; Region: actP; PRK09395" /db_xref="CDD:236495" misc_feature complement(order(3622045..3622050,3622057..3622059, 3622906..3622908,3622915..3622917)) /locus_tag="PA3234" /note="Na binding site [ion binding]; other site" /db_xref="CDD:271374" gene complement(3623157..3623468) /locus_tag="PA3235" /db_xref="GeneID:882396" CDS complement(3623157..3623468) /locus_tag="PA3235" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251925.1" /db_xref="GeneID:882396" /translation="MNDSIYQRIDTNPRFKELVAKRERFAWILSSIMLGLYVIFILLI AFQPQLLGARISPDSSVTWGIPMGVGLILAAFILTGLYVRRANGEFDSLNQEILKEAQ Q" misc_feature complement(3623160..3623465) /locus_tag="PA3235" /note="Uncharacterized membrane protein, DUF485 family [Function unknown]; Region: YjcH; COG3162" /db_xref="CDD:442396" protein_bind 3623404..3623416 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3235" /bound_moiety="AmrZ" protein_bind 3623430..3623442 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3235" /bound_moiety="AmrZ" gene complement(3623686..3624543) /locus_tag="PA3236" /db_xref="GeneID:882397" CDS complement(3623686..3624543) /locus_tag="PA3236" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycine betaine-binding protein" /protein_id="NP_251926.1" /db_xref="GeneID:882397" /translation="MRMMRRLLCWSAGLAMSAAVGMAAAADKPVITIGYVDGWSDSVA TTHVAAEVIREKLGYEVKLMPVAAGIMWQGVARGKLDAMLSAWLPGTHGAYYEKMKDK VVNLAINYPDARIGLIVPEYVSANSIADLQAQKDAFGGRVVGIDAGAGVMIKTDEAIK QYGLDYKLVASSGSGMIAELTRAENEKKPVVVTGWIPHWMFAKWKLKFLDDPKKVYGD TEHVDTVANPALEAKAKPVWEFLKKFGWKDGNEVGQVMLAIQEGAKPEDAAKQWVAAN PGRVKDWVQ" misc_feature complement(3623689..3624453) /locus_tag="PA3236" /note="Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold; Region: PBP2_OpuAC_like; cd13639" /db_xref="CDD:270357" misc_feature complement(order(3623959..3623961,3624094..3624099, 3624109..3624111,3624199..3624201,3624283..3624285, 3624421..3624423,3624427..3624429)) /locus_tag="PA3236" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:270357" gene 3624837..3625058 /locus_tag="PA3237" /db_xref="GeneID:882398" CDS 3624837..3625058 /locus_tag="PA3237" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251927.1" /db_xref="GeneID:882398" /translation="MLKTLTFTVMHFIIAFSVAYALTGSIAVGGLVAAVEPLCNSVGF YFHEKIWKRFEKDGAPRPASAHGWLHRHA" misc_feature 3624837..3625001 /locus_tag="PA3237" /note="Uncharacterized membrane protein, DUF2061 family [Function unknown]; Region: COG3205" /db_xref="CDD:442438" gene 3625201..3626562 /locus_tag="PA3238" /db_xref="GeneID:882401" CDS 3625201..3626562 /locus_tag="PA3238" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251928.1" /db_xref="GeneID:882401" /translation="MPHFLRFAALLGGLALGCANLAQARDVDAASYGYPLTNPFEATI ATTPPELRPELPHSEDIDQKDYSLKLRPEREFALPDNFWPVKKLRYRLARQDHAAPLI FIIAGTGAHYASSFPEYLKKLFYQAGYHVVQLSSPTSWDFMASASRFATPGFSSDDAD DLYRVMQAVRAQQRDLPVTDYYLTGYSLGALNAAFVSHLDESRRSFNFKKVLLLNPPV NLYTSVSNLDKLVETQVKGITDSRTFYEVVLSKLTRYFRQKGYVDINDAMLYDFQQSK QRLSNEEMAMLIGTSFRFSAADIAFTSDLVNRRGLITPPNYPINEGTSLEPFFKRALQ CDFECYMTEQLIPMWRARYDGGSLTQLVNQVSLYKLQDYLHDSPKIAVMHNADDVILG PGDLGFLRRTFGERLTVYPYGGHCGNLNYKVNAQDMLDFFATPAAGQTQVASAALTQQ AGN" misc_feature 3625408..>3625887 /locus_tag="PA3238" /note="Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]; Region: YheT; COG0429" /db_xref="CDD:440198" gene 3626566..3627369 /locus_tag="PA3239" /db_xref="GeneID:882402" CDS 3626566..3627369 /locus_tag="PA3239" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251929.1" /db_xref="GeneID:882402" /translation="MSRTAHWMFALLLSAAASAQADEAAAPAELPPRQLDGDGFSRPL DQLKFNPGLDQREFERATLDALNMYDPWESWNRRVYHFNYRFDEWVFLPVVRGYEYVT PHFVRSGVSNFFDNLGDVPNLLNNLAQLKGKAAMETTARLLFNTTFGVLGLWDPATRM GLHKRSEDFGQTLGFYGVGSGPYLVLPILGPSNLRDTGGLVVDYVGEYQVNYLNVPQA SGDHPEITALRVVDKRYNTSFRYGQMNSPFEYEKLRYIYTEARKLQIAE" misc_feature 3626767..3627351 /locus_tag="PA3239" /note="MlaA lipoprotein; Region: MlaA; pfam04333" /db_xref="CDD:461265" gene 3627509..3628366 /locus_tag="PA3240" /db_xref="GeneID:882403" CDS 3627509..3628366 /locus_tag="PA3240" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="quercetin 2,3-dioxygenase" /protein_id="NP_251930.1" /db_xref="GeneID:882403" /translation="MTRYRDVLELHTGHPASDGAGVRLTRVIGGPSPERFDPFLMLDQ FDTQNPDDYVAGFPSHPHRGFETVTYMLEGRMRHEDHLGNRGLLKPGGVQWMTAAHGI IHSEMPEQVEGAMRGFQLWVNLPAKNKLAPAGYRDIEPEDVPRLETAGGVKVTVIAGR FDDGQAQQIGAVERPDTEPHYYDLQLPAGGRIAPRLPDGHRVLLYVYEGSLTVEGERP VEIATNRLARLSEEGELSLRSEAGARVLVLAGKPLHEPIVQYGPFVMNSREEIEQALR DYRDGVLAV" misc_feature 3627548..3628342 /locus_tag="PA3240" /note="Redox-sensitive bicupin YhaK, pirin superfamily [General function prediction only]; Region: YhaK; COG1741" /db_xref="CDD:441347" gene complement(3628430..3629599) /locus_tag="PA3241" /db_xref="GeneID:882404" CDS complement(3628430..3629599) /locus_tag="PA3241" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251931.1" /db_xref="GeneID:882404" /translation="MSDPLAPRPPLTGLILSGGGARAAYQVGVLAAIADLLPDSAGNP FPVIVGTSAGAINAVGLACGALQFRQAIQRLTAVWQGFRTEHVYRSDWPGVTRQASRF LGHSLLGLGRRVPVALLDNRPLHELLARELDFSGIHAAVRQRQLRAVAVTAFGYESGQ AVTFYQGRATIDPWVRHRRLGIPTRLELRHLLASAAIPLLFPPVRINREYFGDGAVRS QAPISPALHLGATRVLVIGVSGNPATGGDSAMTGLPPSDRPPSLAQIGAHLLNSTFID SLEGDIEQLQRMNQIGQLVAPEVRRQAGGLEPVEVLLVSPSRPLDEIAARHYRELSRV LRLFLRGPGATRASGAGVLSYLLFERGYCSELIELGYHDAMGKRTELERFLRIER" misc_feature complement(3628703..3629584) /locus_tag="PA3241" /note="Predicted acylesterase/phospholipase RssA, containd patatin domain [General function prediction only]; Region: RssA; COG1752" /db_xref="CDD:441358" gene complement(3629667..3630605) /locus_tag="PA3242" /db_xref="GeneID:882405" CDS complement(3629667..3630605) /locus_tag="PA3242" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="lipid A biosynthesis lauroyl acyltransferase" /protein_id="NP_251932.1" /db_xref="GeneID:882405" /translation="MDRPRFSSAFLHPRYWPLWFGLGLLWLVVQLPYPVLLMLGRGLG ALMYRLVGSRREIAARNLELCFPEKSPAERERLLKENFASSGIAFFEMAMSWWWPKAR LARLAHIEGLEHLREAQAQGEGVILMALHFTTLEIGAALLGQVHTIDGMYREHDNPVF DYVQRRGRERHNLDATAIEREDVRSMLKVLRGGRAIWYAPDQDYGAKQSLFVPLFGIP AATVTATTKFARLGRARVLPFTQSRLADGSGYRLTIHPPLEDFPGESEEADCLRINQW VERCVRQQPEQYLWAHRRFKTRPPGEAKLYPKRRKR" misc_feature complement(3629676..3630605) /locus_tag="PA3242" /note="lipid A biosynthesis lauroyl acyltransferase; Provisional; Region: PRK05646" /db_xref="CDD:235543" misc_feature complement(order(3629994..3630002,3630141..3630152, 3630198..3630200,3630204..3630206,3630213..3630215)) /locus_tag="PA3242" /note="putative acyl-acceptor binding pocket [active]" /db_xref="CDD:153246" gene 3630765..3631556 /gene="minC" /locus_tag="PA3243" /db_xref="GeneID:882406" CDS 3630765..3631556 /gene="minC" /locus_tag="PA3243" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="septum formation inhibitor" /protein_id="NP_251933.1" /db_xref="GeneID:882406" /translation="MSQADLLDQDPVFQLKGSMLAVTILELAHNDLARLERQLADKVA QAPNFFRDTPLVMALDKLPEGEGRLDLPALLEVCRRHGLRTLAIRAGREEDIAAAQAL DLPVLPPSGARERPLDIKDSAPRKPAEEPSPSAGEARPEPAKAEEKPAEPVSRPTKVV KTPVRGGMQIYAAGGDLIVLAAVSPGAELLADGNIHVYGPMRGRALAGVKGDATARIF CQQLAAELVSIAGNYKVAEDLRRSPQWGKAVHVSLSGDVLNITRL" misc_feature 3630798..3631553 /gene="minC" /locus_tag="PA3243" /note="septum site-determining protein MinC; Region: minC; TIGR01222" /db_xref="CDD:273511" gene 3631618..3632433 /gene="minD" /locus_tag="PA3244" /db_xref="GeneID:882407" CDS 3631618..3632433 /gene="minD" /locus_tag="PA3244" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cell division inhibitor MinD" /protein_id="NP_251934.1" /db_xref="GeneID:882407" /translation="MAKILVVTSGKGGVGKTTTSAAIGTGLALRGFKTVIVDFDVGLR NLDLIMGCERRVVYDFVNVVNGEATLTQALIKDKRLENLHVLAASQTRDKDALTKEGV EKVMAELRKDFEYIICDSPAGIEKGAHLAMYFADEAIVVTNPEVSSVRDSDRMLGLLA SKSQRAEKGEEPIKEHLLLTRYNPERVTKGEMLGVDDVEEILAIRLLGVIPESQAVLK ASNQGVPVILDEQSDAGQAYSDAVDRLLGKEIPHRFLDVQKKGFLQRLFGGRE" misc_feature 3631618..3632415 /gene="minD" /locus_tag="PA3244" /note="Septum site-determining ATPase MinD [Cell cycle control, cell division, chromosome partitioning]; Region: MinD; COG2894" /db_xref="CDD:442139" gene 3632430..3632684 /gene="minE" /locus_tag="PA3245" /db_xref="GeneID:882408" CDS 3632430..3632684 /gene="minE" /locus_tag="PA3245" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cell division topological specificity factor MinE" /protein_id="NP_251935.1" /db_xref="GeneID:882408" /translation="MSLLDFFRSRKSQNSASIAKERLQIIVAHERGQRAQPDYLPQLQ KDLLEVIRKYVPIDQEQIQVELENQGNCSILELNITLPDR" misc_feature 3632430..3632678 /gene="minE" /locus_tag="PA3245" /note="cell division topological specificity factor MinE; Reviewed; Region: minE; PRK00296" /db_xref="CDD:234718" gene 3632788..3633423 /gene="rluA" /locus_tag="PA3246" /db_xref="GeneID:882409" CDS 3632788..3633423 /gene="rluA" /locus_tag="PA3246" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="pseudouridine synthase" /protein_id="NP_251936.1" /db_xref="GeneID:882409" /translation="MPLSQIRIVHQDDALLVVDKPTLLLSVPGRADDNKDCLVTRLQE NGYPEARIVHRLDWETSGLMVLARDADSHRELSRQFHDRETEKAYTALCWGLPELDSG RIELPLRYDPPTKPRHVVDFEHGRHALTFWRVIERHERWSRVELTPITGRSHQLRVHM LSIGHPLLGDRLYANPEALAAHERLCLHASLLCLTHPQSGERLRFESPAPF" misc_feature 3632809..3633417 /gene="rluA" /locus_tag="PA3246" /note="Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific [Translation, ribosomal structure and biogenesis]; Region: RluA; COG0564" /db_xref="CDD:440330" gene 3633592..3634881 /locus_tag="PA3247" /db_xref="GeneID:882410" CDS 3633592..3634881 /locus_tag="PA3247" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="aminopeptidase" /protein_id="NP_251937.1" /db_xref="GeneID:882410" /translation="MRAELNQGLIDFLKASPTPFHATASLARRLEAAGYRRLDERDAW HTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSPCLRVKPNPEIARNGFL QLGVEVYGGALFAPWFDRDLSLAGRVTFRANGKLESRLVDFRKAIAVIPNLAIHLNRA ANEGWPINAQNELPPIIAQLAPGEAADFRLLLDEQLLREHGITADVVLDYELSFYDTQ SAAVVGLNDEFIAGARLDNLLSCHAGLEALLNAEGDENCILVCTDHEEVGSCSHCGAD GPFLEQVLRRLLPEGDAFSRAIQRSLLVSADNAHGVHPNYADRHDANHGPALNGGPVI KINSNQRYATNSETAGFFRHLCQDSEVPVQSFVTRSDMGCGSTIGPITASQVGVRTVD IGLPTFAMHSIRELAGSHDLAHLVKVLGAFYASSELP" misc_feature 3633592..3634866 /locus_tag="PA3247" /note="putative aminopeptidase 2; Provisional; Region: PRK02813" /db_xref="CDD:235073" misc_feature order(3633835..3633837,3634297..3634302,3634384..3634389, 3634510..3634515,3634519..3634521,3634594..3634596, 3634615..3634617,3634714..3634719,3634789..3634794) /locus_tag="PA3247" /note="active site" /db_xref="CDD:349892" gene complement(3634924..3635475) /locus_tag="PA3248" /db_xref="GeneID:882411" CDS complement(3634924..3635475) /locus_tag="PA3248" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251938.1" /db_xref="GeneID:882411" /translation="MFILPISSDLHLELLDQPRAEELFRLVRANSEHLAPWMPWVPLT QSVDDTRRFIGEGQRLWAERRSCRCGIVESGCLVGVIDLHDFTEDSRSASIGYWLAAS AQGRGLLARALGKTIELGFLGYDRQRLVIRCSTENLRSQRAAERQGFRRDGVIRANEI IAGRAHDHAIYTLLRSEWHAAHA" misc_feature complement(3634945..3635448) /locus_tag="PA3248" /note="Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: RimL; COG1670" /db_xref="CDD:441276" gene complement(3635541..3636257) /locus_tag="PA3249" /db_xref="GeneID:882412" CDS complement(3635541..3636257) /locus_tag="PA3249" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251939.1" /db_xref="GeneID:882412" /translation="MRDEALPTVTAICRALSEQIGHGLLPAGGKLPAERKLSELFATT RITLREALIQLESQGLIYREERRGWFVSPERLAYNPLVRSHFHAMVSEQGRVPATEVL SARQMPASAAVCELLELPALSSVYQIRRARRVDGRLVLYVEHYLNAQYFPGILGHDLT RSLTELYASEYGIHYGRVRFDMVPTALHAEAAAPLKVAVGSPALRISRINRDQRGRLI DCDLEFWRHDAIHISVEVPQ" misc_feature complement(3635550..3636224) /locus_tag="PA3249" /note="phosphonate utilization transcriptional regulator PhnR; Region: phnR; TIGR03337" /db_xref="CDD:132380" gene 3636621..3637679 /locus_tag="PA3250" /db_xref="GeneID:882413" CDS 3636621..3637679 /locus_tag="PA3250" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251940.1" /db_xref="GeneID:882413" /translation="MKRMLASLLGTAIALGSGLALAAEADLQALEQAARKEGQVNSVG MPDSWANWKDTWKDLESKYGLKHMDTDMSSAQELAKFKAEKDNASADIGDVGAAFGPI AVQQGVSQPYKPSTWEQIPAWAKDQDGHWALAYTGTIAFIVNKQLVKDVPHSWADLLQ GKYKVTIGDVSAAAQAVNGVLAAAIANGGDEKNIKPGLEFFGKIAKQGRLSLTNPVIA TLEKGEVEVGIVWDFNGLSYRQQIDPERFEVLIPSDGSVISGYTTIINKYAKHPNAAK LAREYIFSDAGQINLAKGNARPIRAESLTLPDDVKAQLLPNEQYAKAQPIKDAKAWEE TSKRLPRQWQEAVIINMQ" misc_feature 3636783..3637661 /locus_tag="PA3250" /note="ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: AfuA; COG1840" /db_xref="CDD:441445" gene 3637734..3638543 /locus_tag="PA3251" /db_xref="GeneID:882414" CDS 3637734..3638543 /locus_tag="PA3251" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251941.1" /db_xref="GeneID:882414" /translation="MRHDVILVLLDGLNHSVARDCMGHLQALCGAGRGQSYRLECELP SLSRPLYECILTGVPPIDSGILHNDVVRLSQEQSLFHYARAAGLSTAAAAYHWVSELY NRAPFDPARDRHTDDSALPIQRGHFYWSDHYPDSHLFADAESLRRRHAPNFMLVHSMN IDDAGHRHGLASPAYRNAARRADALLSEYLHQWLAAGYQVAITADHGMNEDRSHGGIL EEEREVPLFVFGDAFSRDDLAQPLQTDLCGTLCEILGAAHDKPVCRELLAP" misc_feature 3637734..3638498 /locus_tag="PA3251" /note="c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily [Signal transduction mechanisms]; Region: AtaC; COG1524" /db_xref="CDD:441133" protein_bind 3638328..3638340 /locus_tag="PA3251" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 3638540..3639379 /locus_tag="PA3252" /db_xref="GeneID:882415" CDS 3638540..3639379 /locus_tag="PA3252" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_251942.1" /db_xref="GeneID:882415" /translation="MKRLSGKWLALLFLLPFAAFFVIFQIAPLAWVALNSLKASDAWS LANYLELFGSPFYRQAIRHSLEIAGWSSLLGLLIAVLGSHSLRHVDSRLRDFVMAFSN MTSNFAGVPLAFAFIILLGFNGALTLLLKQAGWIDDFNLYSKTGLIILYTYFQIPLGV MLLYPAFDALREDWRESAALLGANGWQYWRHIGIPVLTPALLGTFVILLANALGAYAT VYSLTTGNFNVIPIRIGALVAGDVFPDPNMASALAMVLVGLMTLITLVHQWLLRRSYH VAR" misc_feature 3638603..3639376 /locus_tag="PA3252" /note="ABC-type uncharacterized transport system, permease component [General function prediction only]; Region: COG4132" /db_xref="CDD:443307" gene 3639366..3640163 /locus_tag="PA3253" /db_xref="GeneID:882416" CDS 3639366..3640163 /locus_tag="PA3253" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_251943.1" /db_xref="GeneID:882416" /translation="MSRADRRPAALYHRLVVCALFLILVLPLAATLLYSLATQWSATL LPDGLTLKWYLTLWSDQRFLLAFARSLLVCFGALAFSVLLILPLMFVIHYHFPRLDGV MNVLILLPFAVPPIVSSVGLLQLYASGPLEMIGTPWVLVGCYFTIALPFMYRAITNNL QAINLRDLMDAAHLLGASTWKAALLVVLPNLRKGVMVALLLSFSFLIGEFVFANLLVG TRYETLQVFLNNMRNSSGHYTSAVVVSYFVFVLVLTWAANRLNKDKA" misc_feature 3639381..3640160 /locus_tag="PA3253" /note="ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]; Region: PotC; COG1177" /db_xref="CDD:440790" gene 3640166..3641161 /locus_tag="PA3254" /db_xref="GeneID:882417" CDS 3640166..3641161 /locus_tag="PA3254" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_251944.1" /db_xref="GeneID:882417" /translation="MSFVSVEQLDKSYGATSIFRDIDFAAARGEFVTLLGPSGCGKST LLRCIAGLTEVDSGRILIDGEDVVPLPPQKRGIAMVFQSYALFPNMTVQQNVAFGLRM QKVPAAELKQRVAEAIELVELGEYAARYPHQLSGGQCQRVALARSLVTRPRLLLLDEP LSALDARIRKHLREQIRRIQQELGLTTVFVTHDQEEALTLSDRIVLMNAGRIVQSGDA ETLYTAPENAFAAGFIGNYNLLDAEQASRLLGQSCAQQVAIRPESLRLGNEPSEGVPA LVRSHSLLGNVIRYRVEAAGVELTVDVLNRSADRLYPAGSQLTLVIDRNSIREVA" misc_feature 3640166..3641149 /locus_tag="PA3254" /note="ABC-type Fe3+/spermidine/putrescine transport systems, ATPase component [Amino acid transport and metabolism]; Region: PotA; COG3842" /db_xref="CDD:443052" gene 3641233..3641811 /locus_tag="PA3255" /db_xref="GeneID:882418" CDS 3641233..3641811 /locus_tag="PA3255" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251945.1" /db_xref="GeneID:882418" /translation="MASLGWVDESFVRRDAELMEQYAEGKLSMDLYMDYTLQPLIGRS VEEVEREVEAYVEEVIEPLIYSDACACLARHRSANDRVLIVSASGVHLVKPIAARIGV DEVLAIDLEVLDGHYTGRTLGTLTYREGKVLRLLDLLEGDDRQLADAWFYSDSRNDLP LLKLVGHPNTVNPDPTLLAYAKEMGWPVNAWR" misc_feature 3641245..3641808 /locus_tag="PA3255" /note="Phosphoserine phosphatase [Amino acid transport and metabolism]; Region: SerB; COG0560" /db_xref="CDD:440326" gene complement(3641872..3642834) /locus_tag="PA3256" /db_xref="GeneID:882419" CDS complement(3641872..3642834) /locus_tag="PA3256" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_251946.1" /db_xref="GeneID:882419" /translation="MNALQGIEGRVEWSEIAAPSCGQGEIRIRVAAAGLNRADLLQKA GLYPPPPGASPALGLECAGVVSEVGAGCTWQVGDRVCALLAGGGMAEEVVVDARHVLP VPAGLSLAEAAGIPEVYATAWLNLFQLAALQPGEKVLLHAGASGVGSAGIQLCKAFGN PCWVSVGSAERLAYCESLGAAGGVLRKQSLESLRDFAPFDVILDPVGARYAGLNLELL RRDGRWVIIGLMGGREAQLDLAQLLGKRIQLTGSTLRTRDAEFKAQLIAELGLKVWPL FSAGKLRAQLERTFPIVDAEAAFEALASNQVQGKVVLVVDPSLA" misc_feature complement(3641896..3642801) /locus_tag="PA3256" /note="PIG3 p53-inducible quinone oxidoreductase; Region: p53_inducible_oxidoreductase; cd05276" /db_xref="CDD:176180" misc_feature complement(order(3641914..3641916,3641929..3641931, 3642073..3642081,3642145..3642147,3642151..3642156, 3642217..3642222,3642277..3642279,3642322..3642324, 3642334..3642339,3642394..3642402,3642409..3642411, 3642463..3642465,3642472..3642474,3642484..3642486, 3642724..3642729)) /locus_tag="PA3256" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176180" gene 3642964..3645060 /gene="prc" /locus_tag="PA3257" /db_xref="GeneID:882420" CDS 3642964..3645060 /gene="prc" /locus_tag="PA3257" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tail-specific protease" /protein_id="NP_251947.1" /db_xref="GeneID:882420" /translation="MKRFLPRTALLLLLGASSLPLFASTAVSVGSAQNSWDSLQPDRE QVIASLNVVELLKRHHYNKPPLNDERSAKIYDSYLKMLDPARMYFTAGDIAEFDRWRN RFDDFLKSGDLDPGFVIYKRHLDRLKGRLDYALAMLDKGVDKIDFSVDESLLIDREKA PWAKDTAELDDLWRKKVKDEVLRLKITGKDDKAIQEQLTKRYKNQLSRLKQTRSEDIF QAYINAFAQSYDPHTQYLSPDNAENFDINMSLSLEGIGAVLQSDNDYVKVVRLVPAGP AAKSKQIATSDKIIGVAQGKGEMVDVVGWRLDEVVKLIRGPKGSQVRLEVIPASNAPN DQTSKIVAITREAVKLEDQAAKKSIIKVDHEGRSYKLGVIDLPAFYLDFKAYRAGDPN YKSTTRDVKKLVAELQKDKVDGIVLDLRNNGGGSLQEATELTGLFIDQGPTVLVRNSD GRVDVLNDDEGKAFYTGPLAVLVNRLSASASEIFAGAMQDYHRALILGGQTFGKGTVQ TIQPLNHGELKLTLAKFYRVSGQSTQHQGVIPDISYPSIVDDKEIGESALPDSMPWDT IRPVVKDEANPFKPFLAQLKAQHDARTENNADFVYARERLALAQELMKEKTVSLNEAK RRAQQTSIENRQLAMENALRKSKGQEPLKELKREDENALPEEDDKTKPQDDAYLTESG HILLDYLNLNSAVAKH" misc_feature 3643078..3645045 /gene="prc" /locus_tag="PA3257" /note="carboxy terminal-processing peptidase; Region: PRK11186" /db_xref="CDD:236873" protein_bind 3643807..3643819 /gene="prc" /locus_tag="PA3257" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 3645099..3646904 /locus_tag="PA3258" /db_xref="GeneID:882421" CDS 3645099..3646904 /locus_tag="PA3258" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251948.1" /db_xref="GeneID:882421" /translation="MKYGAGCTTGPFSLRRERSMTVTEQLSALDSILAHGDLHCLFQP ILSLSERRLVGYEALTRGPSNSPLHSPLALFAVARQCGRLSELELLCRQRAFSRFRDI QGDAMLFLNISPESLLEAGHPPGRTLQLLQQLGISPNRVVIELTEQTPIDDFDLLDTA LHHYRSMGFSIALDDLGAGYSSLRLWSELRPDYVKIDRHFVDGIHLDTVKREFVGSIL KMARASRAQVIAEGIELPEELAVLSEMGVDLVQGYLFGRPQEHPASDVQQMLPSADAP SQSSSDEHGDLRALLLEQRAVDVRTSTQEVVEIFRRQANLNSLAILDEEGRPIGIVHR HALTDALLRPFACDLFLRKPISRLMSDDFLAVELGQTLQQVSRLLTSRARQRIEEDFI VTRGGHYAGMGRVIDVLRLITEEKLQQARHANPLTLLPGNVPIQQCLERLLQQRREAV ICYIDVDSFKPFNDLYGYARGDEVLLCLAQCLSERIDPGSDFVGHIGGDDFMLVLGPE DWRTRIDRLLETFQSQCRRFYSREHLEAGCFVAHNRHGQREEYPLLSLSVGVVHLPAE ACQGMDAAHLATLASEAKRQAKAVPGYSLHLIEAA" misc_feature 3645177..3645875 /locus_tag="PA3258" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:238923" misc_feature 3645966..3646328 /locus_tag="PA3258" /note="Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily; Region: CBS_pair_SF; cl15354" /db_xref="CDD:449531" misc_feature order(3645969..3645971,3645975..3645983,3646050..3646058, 3646263..3646265,3646302..3646304,3646308..3646310, 3646314..3646319,3646326..3646328) /locus_tag="PA3258" /note="ligand binding site II [chemical binding]; other site" /db_xref="CDD:341358" misc_feature 3645969..3646175 /locus_tag="PA3258" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341358" misc_feature order(3646050..3646052,3646086..3646088,3646101..3646106, 3646113..3646115,3646188..3646190,3646263..3646271, 3646314..3646316) /locus_tag="PA3258" /note="ligand binding site I [chemical binding]; other site" /db_xref="CDD:341358" misc_feature 3646188..3646328 /locus_tag="PA3258" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341358" misc_feature 3646371..3646865 /locus_tag="PA3258" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(3646461..3646463,3646593..3646595) /locus_tag="PA3258" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(3646476..3646478,3646485..3646490,3646500..3646502, 3646512..3646514,3646581..3646583,3646587..3646598) /locus_tag="PA3258" /note="active site" /db_xref="CDD:143635" misc_feature order(3646569..3646571,3646656..3646658) /locus_tag="PA3258" /note="I-site [active]" /db_xref="CDD:143635" gene complement(3646918..3647397) /locus_tag="PA3259" /db_xref="GeneID:882422" CDS complement(3646918..3647397) /locus_tag="PA3259" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251949.1" /db_xref="GeneID:882422" /translation="MNSEWIWRLRARLGYGVARQLLGWPWLVKQPRAWQWMQGQFSRM ANLGHRDAQAFYGHLLLFRGQGFGAREEGLRLLRLAASAGDGKSAYQLGVQALKGDSR QAPDALAASRHWALAAEAGHPLAARKLAELYRDGGPGLAPDSERAEHYAQRASALGL" misc_feature complement(3646924..>3647277) /locus_tag="PA3259" /note="TPR repeat [General function prediction only]; Region: TPR; COG0790" /db_xref="CDD:440553" misc_feature complement(3647104..3647190) /locus_tag="PA3259" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" misc_feature complement(3646993..3647082) /locus_tag="PA3259" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" gene complement(3647755..3648066) /locus_tag="PA3260" /db_xref="GeneID:882423" CDS complement(3647755..3648066) /locus_tag="PA3260" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251950.1" /db_xref="GeneID:882423" /translation="MNVQVITRDGEAEYAVLPWAEYQALLAAAGRPAASVAVETTAPA PPSASLLERREARGLSLEQVAREVGISPSYMAMIERGEREASEAILFALERVLGKATG A" misc_feature complement(3647770..3647919) /locus_tag="PA3260" /note="Helix-turn-helix XRE-family like proteins; Region: HTH_XRE; smart00530" /db_xref="CDD:197775" misc_feature complement(order(3647827..3647829,3647902..3647904, 3647914..3647916)) /locus_tag="PA3260" /note="non-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" misc_feature complement(order(3647830..3647832,3647905..3647907)) /locus_tag="PA3260" /note="salt bridge [active]" /db_xref="CDD:238045" misc_feature complement(order(3647824..3647829,3647839..3647841, 3647848..3647850,3647881..3647886)) /locus_tag="PA3260" /note="sequence-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" gene 3648170..3648916 /locus_tag="PA3261" /db_xref="GeneID:882424" CDS 3648170..3648916 /locus_tag="PA3261" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251951.1" /db_xref="GeneID:882424" /translation="MRRRSLGLCILLGVGQAFASELRWGFSPADGMPYVDIVDHQLQG GFTRQLGERVAQRLGLSLRFVETPNRRIDGFMASGHIHVICNSNPEWDSKPERYHWSP ALFEEQDVLLQRDDRPAIRDFAELRGKTLGTSLGYVYADDLMQAFAAGEIRREDTRDL ASRVQMLKRSRLDAAVDMRRPLLYLTRQHPELGLSVSPLVLQSYRMHCIYGGQLPVPV ESMDRVLDEMVRDGSIGRLLENSLQAPQEP" misc_feature 3648233..3648889 /locus_tag="PA3261" /note="ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:440596" gene complement(3649705..3650466) /locus_tag="PA3262" /db_xref="GeneID:882425" CDS complement(3649705..3650466) /locus_tag="PA3262" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="FkbP-type peptidyl-prolyl cis-trans isomerase" /protein_id="NP_251952.1" /db_xref="GeneID:882425" /translation="MKQHRLAAAIALVGLVLSGCDSQTNVELKTPAQKASYGIGLNMG KSLSQEGMDDLDSKAVAKGIEDALGKKKQQLTDEELTEAFAFLQKRAEERMAAIGDEN AKAGKKFLEENGKRDGVTTTASGLQYEIVKKADGPQPKATDVVTVHYEGRLTDGTVFD SSIERGSPIDLPVSGVIPGWVEALQLMHVGEKIKLYIPSELAYGAQSPSPAIPANSVL VFDMELLGIKDPSKPDAEPEAGAAAQPEAKADAKK" misc_feature complement(3649786..3650367) /locus_tag="PA3262" /note="peptidyl-prolyl cis-trans isomerase; Provisional; Region: PRK11570" /db_xref="CDD:183207" gene complement(3650722..3650798) /locus_tag="PA3262.1" /db_xref="GeneID:3240206" tRNA complement(3650722..3650798) /locus_tag="PA3262.1" /product="tRNA-Asp" /db_xref="GeneID:3240206" gene complement(3650815..3650890) /locus_tag="PA3262.2" /db_xref="GeneID:3240263" tRNA complement(3650815..3650890) /locus_tag="PA3262.2" /product="tRNA-Val" /db_xref="GeneID:3240263" gene 3651056..3651976 /locus_tag="PA3263" /db_xref="GeneID:882426" CDS 3651056..3651976 /locus_tag="PA3263" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="recombination associated protein RdgC" /protein_id="NP_251953.1" /db_xref="GeneID:882426" /translation="MWFRNLLVYRLTQDLQLDADSLEKALGEKSARPCASQELTTYGF TAPFGKGPDAPLVHVSQDFFLISARKEERILPGSVVRDALKEKVDEIEAQQMRKVYKK ERDQLKDEIVQTLLPRAFIRRSSTFAAIAPSLGLILVDSASAKKAEDLLSTLREALGS LPVRPLSVKVAPTATLTDWVKTQEAAGDFHVLDECELRDTHEDGGVVRCKRQDLTSEE IQLHLTAGKLVTQLSLAWSDKLSFVLDDKLAVKRLRFEDLLQEQAEKDGGEDALGQLD ASFTLMMLTFAEFLPALFEALGGEEIPQGV" misc_feature 3651056..3651967 /locus_tag="PA3263" /note="recombination associated protein; Reviewed; Region: rdgC; PRK00321" /db_xref="CDD:234726" gene 3652063..3652998 /locus_tag="PA3264" /db_xref="GeneID:882427" CDS 3652063..3652998 /locus_tag="PA3264" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_251954.1" /db_xref="GeneID:882427" /translation="MRALTALSRFVSASFPFWVLLFAILAFFRPAWFLPLTAAIAPLL GLVMFGMGLTLKGEDFREVARHPIRVLIGVLAQFVIMPGLAWLLCRLLQLPAEIAVGV ILVGCCPGGTASNVMTWLSRGDVALSVAITSVTTLLAPLVTPALVWLLASAWLPVSFA AMFLSILQVVLVPIALGLLAQRLLGERTRQVAEVLPLVSVFSIVVIIAAVVAASQARI AESGLLIMAVVMLHNGFGLLLGYLTGKLTGMPLAQRKALAIEVGMQNSGLGAALANAH FSPLAAVPSALFSVWHNLSGSLLAALFRRLDDTPR" misc_feature 3652105..3652977 /locus_tag="PA3264" /note="Predicted Na+-dependent transporter YfeH [General function prediction only]; Region: YfeH; COG0385" /db_xref="CDD:440154" gene 3653138..3653452 /locus_tag="PA3265" /db_xref="GeneID:882428" CDS 3653138..3653452 /locus_tag="PA3265" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_251955.1" /db_xref="GeneID:882428" /translation="MSWIILFFAGLFEVGWAVGLKYTEGFSKPLPTVLTALAMLVSLG LLGLAMKHLPLGTAYAVWTGVGAVGTVIAGIVLFGESMALLRLASVALIVCGLVGLKL SH" misc_feature 3653138..3653446 /locus_tag="PA3265" /note="EamA-like transporter family; Region: EamA; cl23754" /db_xref="CDD:474045" gene 3653667..3653876 /gene="capB" /locus_tag="PA3266" /db_xref="GeneID:882429" CDS 3653667..3653876 /gene="capB" /locus_tag="PA3266" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="major cold shock protein CspA" /protein_id="NP_251956.1" /db_xref="GeneID:882429" /translation="MSNRQNGTVKWFNDAKGFGFITPESGNDLFVHFRSIQGTGFKSL QEGQKVSFVVVNGQKGLQADEVQVV" misc_feature 3653676..3653873 /gene="capB" /locus_tag="PA3266" /note="Cold shock protein, CspA family [Transcription]; Region: CspC; COG1278" /db_xref="CDD:440889" gene complement(3653937..3655811) /locus_tag="PA3267" /db_xref="GeneID:882430" CDS complement(3653937..3655811) /locus_tag="PA3267" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251957.1" /db_xref="GeneID:882430" /translation="MTQHSQFALLGKRRFLPFFITQLLGAFNDNIFKQSLILAILYHL SVSGDRSLLVNLCALLFILPFFLFSALGGQFGEKYNKDALMRALKLAEVGIMLVGAAG FVFGSLPLMFVALFAMGTHSALFGPVKYSILPQHLHEDELVGGNALVEMGTFLAILAG TIGAGVLMSHAHYAAAVATAVVLVAACGYLASRGIPRAAAALPGLKLDWNIFAQSWSI LRLGLGQRPAVSRSLVGNSWFWFLGAVYLTQIPTFAKEWLHGDESVVTLILTVFSVGI ALGSMLCEKLSGRKVEIGLVPFGSIGLTVFGILLWWHAGGIPPGEAPYDWLAVLRHHE TWAVLADILFIGIFGGFYIVPLYALIQARTDEDKRARVIAANNILNALFMVAAALVSI LFLSVAKLSIPQLFLALSLMNVAVNVYIFKIVPEFTMRFLVWLLSHTMYRVRHVNLEA IPDEGAAVLVCNHVSYVDALLIAGSIRRPVRFVMYYRIFSLPVLNFVFRTAGAVPIAA RHEDEGIYERAFQRIADYLRDGELVCIFPEGKLTADGEMNEFRAGIERIIEETPVPVI PMALQGLWGSFFSRDPNKGFFRRLWSRVSLVAGESVAPGAVERLDLQARVTSLRGEAR " misc_feature complement(<3654030..3655796) /locus_tag="PA3267" /note="acyl-[ACP]--phospholipid O-acyltransferase; Region: PRK06814" /db_xref="CDD:235865" protein_bind 3655252..3655264 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(3655986..3658151) /locus_tag="PA3268" /db_xref="GeneID:882431" CDS complement(3655986..3658151) /locus_tag="PA3268" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="TonB-dependent receptor" /protein_id="NP_251958.1" /db_xref="GeneID:882431" /translation="MSSVSSLSRLAVAIALGVSMQAAQAEEEAKELGTVTVVGDWLGE ADQAVVQNHPGARSVVRRREMLESGAQNVRDVLRKVPGVQVQDNNGTGGSDISLNVGV RGLTSRLSPRSTVMIDGVPAAVAPYGQPQLSMMPLSIGNLESIDVVRGAGSVRYGPQN VGGVINFVTRAIPEKFSGEIGTTIEHAGHGGWKKLNQAFLGGTADNGLGVALLYSGVK GADYRDGNNDNDIDDVLLKTHWQLTDSDQLAANFHYYDAYADMPGGLTQAQYDDDPFQ SVRDWDNFRGRRKDFSLKYTRQVDDLTQFEVLTYYSDSFRGSSIAARNLRTITSYPRD YHVFAVEPRVSRIFFAGPTTQEVGIGYRYLKEAMNERASQLALVDNVPTVRPGSDGHT YQDRTGGTEASAFYIDDKIDVGNWTITPGIRFEKIDSDWRDRPVLGLNGKPVQEKKRS KDYNEPLPALSLMYHLSDEWKLFANYSESFGSLQYFQLGQGGSGNDTAAGLEPEKAKT YELGTRYDNGSWGGEITLFYIDFDDELQYVSNDVGWTNLGATKHQGIETSGHYDFAAL DPRLDGLSVYGSLTYTRATYEGDIPSFKGRDLPLYSRQVATAGVRYEVDRWTYNLDAF AQSMQRAPGLSTDSQGNFTHNYITEPSADGQYGDIPGYVTWNARVGYDFGPQASNLKL GLGVKNLFDKQYFTRSSDNNSGIYVGQPRTLFMQASVGF" misc_feature complement(3655989..3658115) /locus_tag="PA3268" /note="Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; Region: FecA; COG4772" /db_xref="CDD:443804" gene complement(3658248..3659102) /locus_tag="PA3269" /db_xref="GeneID:882432" CDS complement(3658248..3659102) /locus_tag="PA3269" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_251959.1" /db_xref="GeneID:882432" /translation="MPDETSGEHTHFWRAAELGGVELLHARYVEQRFAPHVHSSFALV IIEQGAQRFRHRGGEHLAPLGSMVLINPDEVHTGSKAHDAGWLYRGYYPEMEQIDGIL DELEIHHGGVPRFADSVIHDQPLARAFVHLHRLLAEHADSLETQTRWRETVLALFRRH ARLPEAPKAGQEPLAVARARELLAARLLDPPSLEELAAAVNLSPFHFARVFRRATGMP PHAWLRQRRLEQARALLKSGRAPLEVALELGFADQSHLGRQFKQAYGVAPGEYRSACA RSSLTIYE" misc_feature complement(3658266..3659027) /locus_tag="PA3269" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" misc_feature complement(3658281..>3658580) /locus_tag="PA3269" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene complement(3659169..3659756) /locus_tag="PA3270" /db_xref="GeneID:882433" CDS complement(3659169..3659756) /locus_tag="PA3270" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251960.1" /db_xref="GeneID:882433" /translation="MSRRAPMFKPLPITLQRGALRLEPLVEADIPELVSLAEANREAL QYMDGPTRPDWYRQSLAEQREGRALPLAVRLGVQLVGTTRFAEFLPALPACEIGWTWL DQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQREGVLRN HRRLAGGRLDDTFVYSITDHEWPQVKAALEASFTG" misc_feature complement(3659214..3659720) /locus_tag="PA3270" /note="Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: RimL; COG1670" /db_xref="CDD:441276" gene 3660022..3663501 /locus_tag="PA3271" /db_xref="GeneID:882434" CDS 3660022..3663501 /locus_tag="PA3271" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_251961.1" /db_xref="GeneID:882434" /translation="MSLSIGLIAVVALVYMAILFAIAFYGDRRRTPLSPRLRAWVYSL SLAVYCTSWTFFGAVGQATDQLWSFLPIYLGPVLLMLFAPWVLQKMIMISKQENITSI ADFIAARYGKSQALAVVVALICMVGVLPYIALQLKGIVLGVNLLIGSGADSTGTRAQD TALIVSLVLALFTIVFGTRSLDVTEHHRGMVLAIAFESLVKLTAFLAVGIFATFGLYD GFADLFSQARAAPQLADYWEETVHWPAMLLQTGVAMTAIMCLPRQFHVTVVENIEPRD LNLARWVFPIYLVLAALFVVPIALAGQLHLPAGVMPDSFVISLPLAEAHPALALLAFI GGASAATGMVIVASVALSTMVSNDMLLPWLLRRREKDTERPFEAFRHWLLTVRRVSIA VILLLAYVAYRLLGSSASLATIGQIAFAAIAQLGPAMIGALYWKQANRRGVFAGLAAG SLLWAYTLVLPVVAKGLGWPLERIPGLTWLASNPFGLPIEPLTQGVLISLVGNFALFG LVSVLSRTRVSEHWQASRFIGQEISQRQNSRFMLAVQVEDLLMLAARFVGEERARQSF IRFAYRQGKGFTPNQTANNEWIAHTERLLAGVLGASSARAVVKAAIEGREMQVEDVVR IADEASEVLQFNRALLQGAIENITQGISVVDQSLRLVAWNHRYLELFEYPDGLIYVGR PIADIIRYNADRGLCGPGDPDMHVAKRLYWMRQGTPHTSERLFPNGRVIELIGNPMPG GGFVMSFTDITAYREAEQGLKGANESLEQRVQERTQELSQLNQELSEAKSNAEAANQS KTRFLAAVSHDLMQPLNAARLFSAALAHQDALPGEVRDLVQHLDSSLRSAEDLITDLL DISRLESGRVSAERNPFPLNNLYDALGVEFKALAQEQGLHFRLRGSQLRVDSDIKLLR RILQNFLTNAFRYAKGHVLLGVRREDGYLRLEVWDQGPGIPPDKQKVIFEEFKRLDSH QTRAEKGLGLGLAIADRLCKVLGHPLEVRSWPGKGSVFSVRVPLARQAPPALANGHKA EPAQALNGAQVLCVDNEDSILAGMNSLLSRWGCQVWTARSREECATLLDSEMRPQLAL IDYHLDDGETGTQLMAWLRTRLGEPVPGVVISADARPELVAEIHAAGLDYLSKPVKPA ALRALLSRHLSLR" misc_feature 3660040..3661554 /locus_tag="PA3271" /note="Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain; Region: SLC5sbd; cd10322" /db_xref="CDD:271357" misc_feature order(3660160..3660162,3660169..3660171,3661036..3661038, 3661045..3661050) /locus_tag="PA3271" /note="Na binding site [ion binding]; other site" /db_xref="CDD:271357" misc_feature 3661951..3662295 /locus_tag="PA3271" /note="PAS fold; Region: PAS_7; pfam12860" /db_xref="CDD:432837" misc_feature <3662320..3663072 /locus_tag="PA3271" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: BaeS; COG0642" /db_xref="CDD:440407" misc_feature 3663124..3663492 /locus_tag="PA3271" /note="CheY-like REC (receiver) domain, includes chemotaxis protein CheY and sporulation regulator Spo0F [Signal transduction mechanisms]; Region: CheY; COG0784" /db_xref="CDD:440547" gene complement(3663509..3667855) /locus_tag="PA3272" /db_xref="GeneID:882435" CDS complement(3663509..3667855) /locus_tag="PA3272" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase" /protein_id="NP_251962.1" /db_xref="GeneID:882435" /translation="MPISSSSARRAEPAPRPLAEFHPVVRQWFERHFAAPTPAQVEAW PAIREGLSTLVAAPTGSGKTLTAFLAAIDALVVEGLAAGGELADATQVVYVSPLKALS NDIRINLEQPLAGIREELARLGLPDVDIRSAVRTGDTPQVERGAMRKRPPHILVTTPE SLYILLGSESGRQMLAGVRSVIVDEIHALAGSKRGSHLALSLERLQALCPRPLLRIGL SATQKPIEKVARFLVGASGNPRDPACRIVDVGYTRPRDLGIEVPPVALEAVMSNDTWE LVYDRLAHLAGEHRTTLVFVNTRRMAERVTRFLAERLGSRQVAAHHGSLAKELRLDAE QRLKAGQLKVLVATASLELGIDIGDVELVCQLSSPRSIAAFLQRVGRSGHSVGGTPKG RLFPTSRDDLVECAALLDSVRRGELDSLVLPRQPLDVLAQQIVAEVACQEWREDDLYR LVIRAEPYAGLERERFDEVLRMLAEGYHSRLGVRGAYLHRDALNGLLRGRRGARLTAL TSGGTIPDTGDYSVLLEPQGLLVGTVNEDFAVESLAGDVFQLGNTSYRIIRIEPGRVR VEDAQGQPPNIPFWLGEAPGRSDELSASVARLRDTLDELLGEGQALPEGRRLEPAIAW LGATLGLDDGAARQIVEYLARARQALGGLPGSRRLVLERFFDESGGMQLIIHSPHGSR LNRAWGLALRKRFCRSFNFELQAAATEDAIILSLSTSHSFPLDEVWRYLHSASAEHLL VQAVLDAPLFGVRWRWNLTTSLGLPRYAGGRKVPPQLLRMKSEDLLASVFPDQVACLE NIVGEREVPDHPLVAQTLDDCLHEAMDCEGWLALLRDMESGAVDLLARDLPAPSALAA EILTARPYAYLDDAPLEERRTQAVQNRRWSDPESADDLGALDLEAIEAVRGEAWPEAS NADEMHEALNSLGFLTSGEAEANPGWGEWLAQLSEQRRAGRLDCAGSTLWLAAERLPA MRLVHPAAKVPDAFQAPRGYPPPDSAEAATVELTRARLGGFGPRTAGQLAADLGIGLA DQQYALAALEREGYVLRGRFSPGATEEEWCERHLLARIHRYTVKRLRREIEPVERADF MRFLFDWQRLAPGTRGRGAESLATVVEQLEGFQAAAAAWESELLAARVADYASHWLDQ LCRSGRIVWARLAGRSKAAGGPLRSAPIVLLPRRELGLWSVLQRDAPEPELSPRAARV LEVLREQGASFFDELSQDAHLLRSELENALGELVSVGRVNADSFAGLRTLLMPADKRS RQERRSRGLPGGMQDAGRWAPLRRAKAEEAGQRLPAEVLEHVARTLLRRYGVVAWRLL EREADWLPPWRELLRVYHRLEARGEIRGGRFIAGLAGEQFALAEAVGLLREVRKRPPD GAMLVVSAVDPLNLVGGLLPGERVPAVTGNRLLYRDGAPLAALVAGKVRMLAEVDGET AQQIRALLIRRH" misc_feature complement(3665213..3667819) /locus_tag="PA3272" /note="Lhr-like helicase [Replication, recombination and repair]; Region: Lhr; COG1201" /db_xref="CDD:440814" misc_feature complement(3663995..>3665566) /locus_tag="PA3272" /note="Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]; Region: PksD; COG3321" /db_xref="CDD:442550" gene complement(3667924..3668307) /locus_tag="PA3273" /db_xref="GeneID:882436" CDS complement(3667924..3668307) /locus_tag="PA3273" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251963.2" /db_xref="GeneID:882436" /translation="MTHDWDLVERLLLEVRQSAHENFAPRAHAERLAEERSQAGQRVG DMDALKQKAADYEAILLEGGFIEPRPEEQGGNGENFVLTPRGERLLGLIGGETPKAAE ARRLLEENGSEALHAERFDRFVAGL" gene 3668474..3668761 /locus_tag="PA3274" /db_xref="GeneID:882437" CDS 3668474..3668761 /locus_tag="PA3274" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251964.1" /db_xref="GeneID:882437" /translation="MKPLFALASACALLVATPVFACSEAEAEKMGKEVATKVASITQK NPQRARELNEQLRQRQEARSEQNRPSDCDAYAQMLKELDQEKGDVQRNTSQ" gene complement(3668840..3669169) /locus_tag="PA3275" /db_xref="GeneID:882438" CDS complement(3668840..3669169) /locus_tag="PA3275" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251965.1" /db_xref="GeneID:882438" /translation="MINYFWFVLAAFCEIAGCYAFYLWLRLGKSALWVLPGLLSLTLF ALLLTRVEASYAGRAYAAYGGIYVAASLFWLAFVERSRPLWSDWLGVALCVVGASVVL FGPRLSQ" misc_feature complement(3668852..3669169) /locus_tag="PA3275" /note="Uncharacterized inner membrane protein YnfA, drug/metabolite transporter superfamily [General function prediction only]; Region: YnfA; COG1742" /db_xref="CDD:441348" gene complement(3669166..3669588) /locus_tag="PA3276" /db_xref="GeneID:882439" CDS complement(3669166..3669588) /locus_tag="PA3276" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251966.1" /db_xref="GeneID:882439" /translation="MESESIVYGCIRDWPGDSMERRMRRAANRRVLDSLPGGEAWPFL GREMFSRCEQSGAGLYQTQIIHFGASYQAIEYEWSLWVEQFEALLRRLYWASAVVHLE TEVNGSHTFRWESERGFHTPQESDLQVRCAWEREGGRR" protein_bind complement(3669798..3669810) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3276" /bound_moiety="AmrZ" gene complement(3669821..3670633) /locus_tag="PA3277" /db_xref="GeneID:882440" CDS complement(3669821..3670633) /locus_tag="PA3277" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_251967.1" /db_xref="GeneID:882440" /translation="MQNRMMITGAGSGLGREIALRWARDGWRLALADVNEAGLAESLK LVREAGGDGFTQRCDVRDYSQLTALAQSCEEKFGGIDVIVNNAGVASGGFFGELSLED WDWQIAINLIGVVKGCKAFLPLLERSKGKIVNIASMAALMQGPAMSNYNVAKAGVVAL SESLLVELALVEVGVHVVCPSFFQTNLLDSFRGPSPEMKHQVGKLLESSPISAADIAD YIHAEVAKGSFLILPHEQARMAWRIKQQNPQAIYDEMTAMAGKMQAKRQRQA" misc_feature complement(3669824..3670627) /locus_tag="PA3277" /note="SDR family oxidoreductase; Region: PRK05650" /db_xref="CDD:235545" gene complement(3670759..3671058) /locus_tag="PA3278" /db_xref="GeneID:882441" CDS complement(3670759..3671058) /locus_tag="PA3278" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251968.1" /db_xref="GeneID:882441" /translation="MIGWGRACIGVGGLLLLGQLLGGALLLADDGEATLAVEHFWQFV FLIPAILVALGMFVLQHHVGSFAQLYRRRLDGASYLLVSCGIALVLGKLCVLLLA" gene complement(3671227..3672549) /gene="oprP" /locus_tag="PA3279" /db_xref="GeneID:882442" CDS complement(3671227..3672549) /gene="oprP" /locus_tag="PA3279" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phosphate-specific outer membrane porin OprP" /protein_id="NP_251969.1" /db_xref="GeneID:882442" /translation="MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTK GGLEVATTDKEFSFKLGGRLQADYGRFDGYYTNNGNTADAAYFRRAYLEFGGTAYRDW KYQINYDLSRNVGNDSAGYFDEASVTYTGFNPVNLKFGRFYTDFGLEKATSSKWVTAL ERNLTYDIADWVNDNVGTGIQASSVVGGMAFLSGSVFSENNNDTDGDSVKRYNLRGVF APLHEPGNVVHLGLQYAYRDLEDSAVDTRIRPRMGMRGVSTNGGNDAGSNGNRGLFGG SSAVEGLWKDDSVWGLEGAWALGAFSAQAEYLRRTVKAERDREDLKASGYYAQLAYTL TGEPRLYKLDGAKFDTIKPENKEIGAWELFYRYDSIKVEDDNIVVDSATREVGDAKGK THTLGVNWYANEAVKVSANYVKAKTDKISNANGDDSGDGLVMRLQYVF" misc_feature complement(3671230..3672378) /gene="oprP" /locus_tag="PA3279" /note="Phosphate-selective porin O and P; Region: Porin_O_P; pfam07396" /db_xref="CDD:429442" gene complement(3673008..3674324) /gene="oprO" /locus_tag="PA3280" /db_xref="GeneID:882443" CDS complement(3673008..3674324) /gene="oprO" /locus_tag="PA3280" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyrophosphate-specific outer membrane porin OprO" /protein_id="NP_251970.1" /db_xref="GeneID:882443" /translation="MIRKHSLGFVASALALAVSAQAFAGTVTTDGADIVIKTKGGLEV ATTDKEFSFKLGGRLQADYSRFDGFYTKNGNTADAAYFRRAFIELGGTAYKDWKYQIN FDLSHNTGSSDNGYFDEASVTYTGFNPVNLKFGRFDPDFGLEKATSSKWVTAPERNAA YELADWINTHQDGMGAQVNSTLADMAYLSAGVSAKDADDSDGDSVKQFNFRGVFAPMH EAGNVLHVGVNYAYRDLDDTAFDSRIRPRLGMRGIATSGGNDAGDNGNRATFGGVSNS PAGSYKDDSVWGLEGAWAMGPFSAQAEYLARKLKADDNAYKDIKAKGYYAQLAYTLTG ESRQYKLEGAKFDSVKPENKEIGAWEVFYRYDNIKVEDDNVVADTATREVGDTKAKAH NLGVNWYVNDAVKISAAYVKAKTDKITNNNGDDDGDGFVTRLQYVF" misc_feature complement(3673011..3674168) /gene="oprO" /locus_tag="PA3280" /note="Phosphate-selective porin O and P; Region: Porin_O_P; pfam07396" /db_xref="CDD:429442" protein_bind complement(3674439..3674451) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3280" /bound_moiety="AmrZ" protein_bind 3674445..3674457 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3280" /bound_moiety="AmrZ" protein_bind complement(3674450..3674462) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3280" /bound_moiety="AmrZ" gene complement(3674570..3675160) /locus_tag="PA3281" /db_xref="GeneID:882444" CDS complement(3674570..3675160) /locus_tag="PA3281" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251971.1" /db_xref="GeneID:882444" /translation="MKTVFLRLQHALDVTRRADFLAPLALRLYLAPVFWMAGSQKLAD MPATIEWFGNPDWGLGLPFPELLAWLAALSEAGGAVLLLCGLAVRWISLPLMVTMLVA IFAVHWPNGWQAIADPSAPFANAQVLEAGEKLARAREILREYGNYDWLTSSGSFAIVN NGIEFAATYLVMLLALFFGGAGKWLSADFWIAQKLR" misc_feature complement(3674573..3675100) /locus_tag="PA3281" /note="Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown]; Region: DoxX; COG2259" /db_xref="CDD:441860" gene complement(3675163..3675897) /locus_tag="PA3282" /db_xref="GeneID:882445" CDS complement(3675163..3675897) /locus_tag="PA3282" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251972.1" /db_xref="GeneID:882445" /translation="MNHTTLQRRFAARIRDPQQALPPGIATERMAIYEELFFNNLDGF ISSGFPVLRQLFDEPRWHRLVRAFMREHRCRTPYFSQLGEEFIGWLQDGYRAEEGDPP FLLELAHYEWVELALSLAEAPVETLPQAWSWSPLAWPLAYRWPVHRLGPSHRPMEPPA EPTCLLVWRDPAERVRFLHLSPFAYRLAQRLSEEGEAPVALLPLLRELAGSCGLSADV EYFENAFALLEDWHAQGILMGEGALE" misc_feature complement(3675181..3675897) /locus_tag="PA3282" /note="Uncharacterized conserved protein, DUF2063 family [Function unknown]; Region: COG3219" /db_xref="CDD:442452" gene complement(3675894..3676748) /locus_tag="PA3283" /db_xref="GeneID:882446" CDS complement(3675894..3676748) /locus_tag="PA3283" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251973.1" /db_xref="GeneID:882446" /translation="MQREFVSGAGLGLRRALLEPLGAGDGVRVDFLEVAPENWIGIGG RLGRQFRELTERLPFLCHGLSLNLGGYAPLDMSLLRAIKGFIEQHDIRAYSEHLSACA DDGQLYDLMPLPFSDESVRRVAERVRVVQDVLERPLIVENVSAYARLPGELEEVDFVR AVLEEADCQLLLDVNNVYVNACNFGFDAHAYIAAMPSRRIAYLHMAGHDEQGASLKID THGAPVCDPVWELLAHAYACHGERPTLLERDFNLPPLSELYAETDRIRELQRRSGEAQ LRSLGYGT" misc_feature complement(3675912..3676748) /locus_tag="PA3283" /note="hypothetical protein; Provisional; Region: PRK05409" /db_xref="CDD:235447" gene complement(3676767..3677081) /locus_tag="PA3284" /db_xref="GeneID:882447" CDS complement(3676767..3677081) /locus_tag="PA3284" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251974.1" /db_xref="GeneID:882447" /translation="MKKISLASSVVGAALLGVASVGAHAAQNPFAVQELSSGYSVAAA EKAKEGSCGEAKCGADKGKREASKAGHEGSCGADRKAKEGSCGGEKKAGEGNCGADKK KS" misc_feature complement(3676779..3677078) /locus_tag="PA3284" /note="Uncharacterized low-complexity protein [Function unknown]; Region: COG3767" /db_xref="CDD:442981" gene complement(3677720..3678331) /locus_tag="PA3285" /db_xref="GeneID:882448" CDS complement(3677720..3678331) /locus_tag="PA3285" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ECF subfamily sigma-70 factor" /protein_id="NP_251975.1" /db_xref="GeneID:882448" /translation="MAAPTDAELLPRLLAGEQRAFRELVGAYQGAMRAVAWAIIGRSH TEEVVQDAWLAAVRGLDGFQGRSSLKTWLLTITANTAKSRLRQVRREVFLDDLPGPHG TVDDQRFAADGHWSQPPHAWHEDSPEALLTEGELRDCLDKTLNGLSELQRSVLTLRER QGLELEEIRDLLDITLSNVRVLLHRARLKVFATLEHFEETGQC" misc_feature complement(3677732..3678322) /locus_tag="PA3285" /note="DNA-directed RNA polymerase specialized sigma subunit, sigma24 family [Transcription]; Region: RpoE; COG1595" /db_xref="CDD:441203" gene complement(3678334..3679386) /locus_tag="PA3286" /db_xref="GeneID:882449" CDS complement(3678334..3679386) /locus_tag="PA3286" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="3-oxoacyl-ACP synthase" /protein_id="NP_251976.1" /db_xref="GeneID:882449" /translation="MESFNTFVRQYNDQHAEAIAKGELEALAESSSAFIEKASGIKSR FVMNKEGILDPQRMVPYLPERSNDEWSILCEMAVAAAREALQRAGRSAADIDGVIVAC SNLQRAYPAIAVEVQAALGIQGYGYDMNVACSSATFGIQAATTAIQTGQARAILMVNP EICTGHLNFRDRDSHFIFGDACTAVIVERADLAVSKHQFDIVSTRLLTQFSNNIRNNF GFLNRADESGIGKRDKLFVQEGRKVFKDVCPMVAELIGEHLAANEIQVAEVKRFWLHQ ANLNMNLLITRKLLGRDAEAHEAPVILDSYANTSSAGSVIALHKHQDDLPSGAIGVLS SFGAGYSIGSVILRKH" misc_feature complement(3678337..3679383) /locus_tag="PA3286" /note="3-oxoacyl-(acyl carrier protein) synthase III; Reviewed; Region: PRK07515" /db_xref="CDD:236037" gene 3679946..3680461 /locus_tag="PA3287" /db_xref="GeneID:882450" CDS 3679946..3680461 /locus_tag="PA3287" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251977.1" /db_xref="GeneID:882450" /translation="MTDSPRPELDMETQEFVHQLFDLARQGNSQRLEQLLQQGLPPNL RNHKGDSLLMLASYHGHADTVRLLLAYKADPDLRNLAGQTPLAGAAFKGDLAMVELLL AGGADVEGASADGKTALMMAAMFNQAEVAASLLAHGARRDAQDAAGLTPLAAARMMNA EATVALLSRPH" misc_feature <3679970..3680446 /locus_tag="PA3287" /note="Ankyrin repeat [Signal transduction mechanisms]; Region: ANKYR; COG0666" /db_xref="CDD:440430" misc_feature 3680090..3680182 /locus_tag="PA3287" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature order(3680093..3680095,3680105..3680110,3680117..3680125, 3680129..3680134,3680144..3680146,3680153..3680155, 3680180..3680182,3680186..3680188,3680192..3680194, 3680204..3680209,3680216..3680224,3680228..3680233, 3680243..3680245,3680252..3680254,3680279..3680281, 3680285..3680287,3680291..3680293,3680303..3680308, 3680315..3680323,3680327..3680332,3680342..3680344, 3680351..3680353,3680378..3680380) /locus_tag="PA3287" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:293786" misc_feature 3680186..3680281 /locus_tag="PA3287" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature 3680285..3680380 /locus_tag="PA3287" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" gene complement(3680465..3680968) /locus_tag="PA3288" /db_xref="GeneID:882451" CDS complement(3680465..3680968) /locus_tag="PA3288" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251978.1" /db_xref="GeneID:882451" /translation="MPGLFFRSRLPMRQALLIVDVQPCFAPPDWLLEGIGQLLGRMPS VASVERHDESRTPFQRQLGWRPPLDDACLVAADRVFVKHGYLPTAELVDHLRALRAER VLVCGIQADTCVLAAGFALFDAGLQPTLIGDLVLGSSLDRSGELGVRLWKHHFGQVVS LAEVLAD" misc_feature complement(3680492..3680926) /locus_tag="PA3288" /note="Nicotinamidase-related amidase [Coenzyme transport and metabolism, General function prediction only]; Region: PncA; COG1335" /db_xref="CDD:440946" gene 3681048..3681461 /locus_tag="PA3289" /db_xref="GeneID:882452" CDS 3681048..3681461 /locus_tag="PA3289" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251979.1" /db_xref="GeneID:882452" /translation="MRPMYAVAILFLLAGCSSVPAEKTRAIPAERLLGYQQPVSGGGR LEVHRDYGYLGGGCYVAFLIDRQVAARIGVGEEASFQVPAGEHVVGIGIDTQDDTLCG KGLLNRELRTRIAADGNARFRIVSEASSGFDIRAE" gene complement(3681500..3684148) /locus_tag="PA3290" /db_xref="GeneID:882453" CDS complement(3681500..3684148) /locus_tag="PA3290" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251980.1" /db_xref="GeneID:882453" /translation="MPNFGFHIAPTHPVAGRLTYDSKKLSENILKQQSDERVFSRAQE QKRLSEGDVVGGAPCCKAIHITLGFDGTNNNDKADGSSVSPSCSNVARLIHASIGSGD DINSRGIFKYYCPGVGTVFPDIKEFTPSNMGLIGAEGGENRINWGLVQLVDALFYTLL KSRLKLNDVQGLVEEMSTNWTVSTLTGGLLENGEKKRRAALEPKLKELEEKLRQRQNS GQKPHILAMRLYIYGFSRGAAEARAFANWLQELTRVSDADGRVEYRFAGLPISIEFLG LFDTVAAVGLADSAPFAAGHMDWADDTMRLPDEALSQCLPTILPEDCSFLKRCVHLVS CHEQRASFPLDSIRRRDMDANGRRTGPSCYRKWTVEYAYPGVHSDVGGGYGVGNQGKA VGGSEFLLSQIALQHMYAEAFEAGAPLQVPAPAVHPDFHEEWRVMVPKIEAEFSVSEE LATRFNAWQAQAKAGPLEEVIRRETALITAWRIDRYAGGLRNKAFFANVPPDMPEAQQ KAWEALHKRRSREYAAAQQGEPLPPMSAAEQAEWDRNVALIGGEDQLRDLRVEKQFDP PLDQRQLLGAAAEFAHDYKGDWGVLDDGMTVGGVIDLLLGGTVFLINEEDEAEEYSQI HRDGSARYHQLFSAPDRVAPGQEKLVALFDEQVHDSRAWFMNTSAIGPREPFTDYFRY RLVHFDNESNKRLSVLATAGRVVGVGVMLASVGLSVKRRDPRMLLGLFLPSLARPLLS GKVGLPEISAFDPLTGIALPMVGGAALDNLRAFTREPGDKVEQIGQLPPPPPLAVAAV QSPALQQVLLAQQTVEALKARDLGSLAGLVAKAELTQAPAAATPAWLAEAKQALQDMG TEQAQPPGPGSAPGWLKRGKDLMESL" misc_feature complement(3682916..>3683467) /locus_tag="PA3290" /note="Uncharacterized alpha/beta hydrolase domain (DUF2235); Region: DUF2235; pfam09994" /db_xref="CDD:462937" gene complement(3684163..3684717) /locus_tag="PA3291" /db_xref="GeneID:882454" CDS complement(3684163..3684717) /locus_tag="PA3291" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251981.1" /db_xref="GeneID:882454" /translation="MQKLMSLICVGTKKSIGLVVFLSTFFGLVACQAGPEVLSAPVMG YNHTSAAINEFTVNGAGGPNLGPYQGDGSQVCCGVIPKRWNPNLKVIVEWEKDPNPRA VIKRDKYGRLDESDYLRHASSYTRHKATVNVPRYDEKVCLLQVHFLPCDEVAVSTTCY GPNHPKYPDKAYFEMRKSTICPAN" misc_feature complement(3684253..3684585) /locus_tag="PA3291" /note="Protein of unknown function (DUF3304); Region: DUF3304; pfam11745" /db_xref="CDD:463339" gene complement(3684905..3685762) /locus_tag="PA3292" /db_xref="GeneID:882455" CDS complement(3684905..3685762) /locus_tag="PA3292" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251982.1" /db_xref="GeneID:882455" /translation="MNGRGIGLPALLPGPLLAASCQSGPDMLAAPVMGYNHTSAAINW FSVNGAGGPRLGPYQGDGSQVCCGVIPKKWNPNLKAVVEWEKDPKPHAAIRRDKYGRL DKDDYLRHASSYTRHKMIVDIPRYSEKICLLQVHFLPCDQVAVSTTYYSQGHPEYPVR KYFQKREPSCKKLLNAKGLRTPDWLIALLIGFLFLQACQAGSDMVSTPIGGYNHTSAA INRFSVNGAGGLNLGPFQGGAGQVCCGVVPRVWKSGLKATVEWEVVPEPGAYKDWPER YFQMAGENV" misc_feature complement(3685328..3685660) /locus_tag="PA3292" /note="Protein of unknown function (DUF3304); Region: DUF3304; pfam11745" /db_xref="CDD:463339" misc_feature complement(<3684935..3685129) /locus_tag="PA3292" /note="Protein of unknown function (DUF3304); Region: DUF3304; pfam11745" /db_xref="CDD:463339" gene complement(3685759..3686574) /locus_tag="PA3293" /db_xref="GeneID:882456" CDS complement(3685759..3686574) /locus_tag="PA3293" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251983.1" /db_xref="GeneID:882456" /translation="MTPNPRHWARELWQRSRDRGLQTHIDVLVDATGLDDYPLLAEHA RQSDPPALFKLLEQTPEAALADEGPLLLRLEDGHAAWLDELLERIDCRRHLMLLFSPW PLPRLGEHLRSCTQAEWNQGRSSGVLRFYEPGLFMAVSDMLDPRQSCYLHAPVSSWHW LDRDGRPRALAGHYQAHETPPLQAALRLEAHQVAALRAWSEAEAYRREYFVLPREHGL GSQESLLQHLVQAHLAADRQGLQDFDQRDAFVAQWLREQTPGPGFSPAGTSRA" misc_feature complement(3686134..3686496) /locus_tag="PA3293" /note="Domain of unknown function (DUF4123); Region: DUF4123; pfam13503" /db_xref="CDD:433262" gene complement(3686584..3688650) /locus_tag="PA3294" /db_xref="GeneID:882457" CDS complement(3686584..3688650) /locus_tag="PA3294" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251984.1" /db_xref="GeneID:882457" /translation="MFNPANQTHFSLSLDGLRHDLQVLEFSGHEGISRPYRFELELVS ERAGLDLEALMHRPAFLAFTPQGQGVHGLVYGAAQGDAGKRLTRYRLTLVPHLAYLAQ RNNQRIFQHLTVPQIVALILEEHGILADAYRFQLGTRYPEREYCVQYDESDLHFVQRL CAEEGIHFHFRHSAEAHLLVFGDDQTVFPRLGRPTAYVHDSGLVADEPVIKRFSLRLA SRTTRTTRRDYDFEKPRLLLEAGNRPAADAPAEPDLEDYDYPGRFVDRQRGKLLSQRA LERHRADRRLGEGVSDQPLLVSGHFLEIAEHPRAEWNDLWLLSEVFHEGKQPQVLEEN VTSDTSASTDDFQQGYRNRFLATPWEVFFRPPLEHPKPRVLGSQTAVVTGPPGEEIHC DRYGWVRVQFHWDREGQGDDKSSCWLRVASGWAGNGYGGIVIPRVGMEVLVDFLEGDP DQPLVSGCVYHAAHPVPYELPANQTRSVFKSLSSPGGGGYNELRIEDRKGQEQIFVHA QRDWDENIEHDQKIRVGHERHDTVEANSYSEFKAEEHHTVHGERKVELKADDHLTVGD SQHVKLGRAYLARAGREIHLKAGQKMVIEADSELTVTAGGSFIRLDASGIAISGPLAR INAGGAPGSGSGIAIKMPRVPGMADQDSSGAPPEAVAANLPPRQPVCEECLLQAKKRG QALAER" misc_feature complement(3687064..3688623) /locus_tag="PA3294" /note="type VI secretion system Vgr family protein; Region: VI_Rhs_Vgr; TIGR03361" /db_xref="CDD:274542" misc_feature complement(3686788..>3686913) /locus_tag="PA3294" /note="Uncharacterized protein conserved in bacteria (DUF2345); Region: DUF2345; pfam10106" /db_xref="CDD:431059" gene complement(3688879..3689316) /locus_tag="PA3295" /db_xref="GeneID:882458" CDS complement(3688879..3689316) /locus_tag="PA3295" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="HIT family protein" /protein_id="NP_251985.1" /db_xref="GeneID:882458" /translation="MSLHGVYDSQNIFAKIIRGEAPCYKVYEDEDVLAFLDLFPQSYG HTLVIPKHAEARNLLEIEAQNLVKVMAVVQRLTRALVEEVQPDGVQVAQFNGAPAGQT VFHIHFHVIPRFSGENLGIHAAKQGDPEVLAQLQERLAQRLQG" misc_feature complement(3688894..3689292) /locus_tag="PA3295" /note="Purine nucleoside phosphoramidase/Ap4A hydrolase, histidine triade (HIT) family [Nucleotide transport and metabolism, General function prediction only]; Region: HinT; COG0537" /db_xref="CDD:440303" gene 3689521..3690951 /gene="phoA" /locus_tag="PA3296" /db_xref="GeneID:882459" CDS 3689521..3690951 /gene="phoA" /locus_tag="PA3296" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="alkaline phosphatase" /protein_id="NP_251986.1" /db_xref="GeneID:882459" /translation="MTPGYPLALSLAVSMAVLGSALPAQARQDDPSLFNRQARGELSE YGGARRVEQDLTQALKQSLSKKKAKNVILLIGDGMGDSEITVARNYARGAGGYFKGID ALPLTGQYTHYSLHKDSGLPDYVTDSAASATAWSTGVKSYNGAIGVDIHEQPHRNLLE LAKLNGKATGNVSTAELQDATPAALLAHVTARKCYGPEATSKQCPSNALENGGAGSIT EQWLKTRPDVVLGGGAATFAETAKAGRYAGKTLRAQAEARGYRIVENLDELKAVRRAN QKQPLIGLFAPGNMPVRWLGPTATYHGNLNQPAVSCEANPKRTADIPTLAQMTSKAIE LLKDNPNGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQKALAFAKADGETLVIV TADHAHSSQIIPPETAAPGLTQLLTTKDGAPLAISYGNSEESSQEHTGTQLRIAAYGP QAANVTGLTDQTDLFFTIRRALNLRD" misc_feature 3689521..3690945 /gene="phoA" /locus_tag="PA3296" /note="alkaline phosphatase; Provisional; Region: PRK10518" /db_xref="CDD:236706" gene complement(3691024..3695004) /locus_tag="PA3297" /db_xref="GeneID:882460" CDS complement(3691024..3695004) /locus_tag="PA3297" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ATP-dependent helicase" /protein_id="NP_251987.1" /db_xref="GeneID:882460" /translation="MTDQTPSLDQLVRRLDQAQISDRHRLRRQLHELRKQPDDARLAQ WVERFQTSCAKVEARRASVPAIRYDDSLPIAAKRDEIKAAIAAHQVVVIAGETGSGKT TQLPKICLELGRGIHGLIGHTQPRRLAARSVATRVAEEIGTPLGALVGYQVRFEDQSD DSTLVKLMTDGILLAETQHDRYLERYDTLIVDEAHERSLNIDFLLGYLKTLLHRRPDL KLIITSATIDLERFSRHFDGAPVIEVSGRTYPVETWYRPLAAETDEEGNRVEDDLSVD QGILAALDEIAAHEREVGKRPGDVLVFLPGEREIRDAAEMLRKANLRHTEVLPLYARL TPAEQQKIFQPRPGRKIVLSTNVAETSLTVPGIRYVIDSGTARISRYSYRAKVQRLPI EAVSQASANQRKGRCGRVEPGICVRLYSEEDFNARPAFTDPEILRTNLAAVILQMLHL RLGDIEAFPFIEPPDGKAIKDGFTLLQELSAVNREGQLTPLGRQLARLPIDPRLGRML LEAAQQGSLEEVLTVASALSVQDPRERPVERQQAADQAHAQWKDPDSDFAALINLWRG FEEQRQALGSNALRSWCRKNFLNYLRLREWRDAHRQLTLICRELKLPFGRPAKAEARK PEAKKGASADNEREVPGIDYAAVHKAILSGLLSQIGQKAEEGDYLGARQRRFWIHPSS GIARKRPQWIMAAELVETTKLFARMVAKIEPDWLEPLAGHLIKTNHFEPHWEKRRGQV VAFEQVTLYGLIVIGRRPVHYGPIDPPVARELFIREGLVRGEINSRAKCLSANRQLLE KLDELEAKARRRDILADEETLFAYYDARLPADIYQTASFEKWYARERQNQPDLLLMRE EDVLAREASEVTAAQYPDRLRLGDLHLSLSYQFEPGTARDGVTVRVPAPLLPQLPAER IDWLVPGLLYDKAVALVRNLPKAIRKSFVPVPDFVRAALERITFGEGSLPQVLGRELQ RMTGVRVADEAWAEAATQLDDHLRMNIEVVDAQGKFLGEGRDLAELTARFAEASQAAL AIPQADKEQQRPVEAKAFASVAEKAQQKVAGLSMTVYPALVEEQGEVKEGRFPTQAEA DYQHRRALQRLLLQQLAEPAKYLRAKLPGQTEMGLLYRELGRVEALVEDILLASLDSC VLQGESLPRDGAALAALAERKRAAWNEHAERLARLVLDILKLWHGLQKRFKGKVELAM TVPLNDVKGQLANLVYPGFVRATPLEWLKEYPRYLKAIEQRLDKVAGQVQRDRVWSGE LGELWAQYQARLAKHAQEGKRDAELQVYRWMLEEYRVSLFAQQLGTRLPVSDKRLAKQ WSQVEG" misc_feature complement(3691036..3694974) /locus_tag="PA3297" /note="RNA helicase HrpA; Region: DEAH_box_HrpA; TIGR01967" /db_xref="CDD:273900" gene complement(3695179..3695481) /locus_tag="PA3298" /db_xref="GeneID:882461" CDS complement(3695179..3695481) /locus_tag="PA3298" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251988.1" /db_xref="GeneID:882461" /translation="MRGFFVAGSRLRGERACADVPAAHHLPEEPPMARLDPALAEEIR RLPISRRLELTQALLHRAGPEVKRQWPPVAEDRLADCRAGTADALPLAEMLKRLGR" gene complement(3695511..3697199) /gene="fadD1" /locus_tag="PA3299" /db_xref="GeneID:882462" CDS complement(3695511..3697199) /gene="fadD1" /locus_tag="PA3299" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="long-chain-fatty-acid--CoA ligase" /protein_id="NP_251989.1" /db_xref="GeneID:882462" /translation="MIENFWKDKYPAGIAAEINPDQYPNILSVLKESCQRFATKPAFT NLGKTLTYGELYKLSGDFAAYLQQHTDLKPGDRIAVQLPNVLQYPIVVFGAMRAGLIV VNTNPLYTARELEHQFNDSGAKAVVCLANMAHLVEGVLPKTGVKQVIVTEVGDILPPL KRFIVNFVVKHIKKMVPAYSLPQATKLTDALARGAGKSFQEAAPQADDVAVLQYTGGT TGVAKGAMLTHRNLVANMLQCKALMGANLNEGCEILIAPLPLYHIYAFTFHCMAMMLT GNHNILITNPRDLPSMLKDLGQWKFTGFVGLNTLFVALCNNETFRKLDFSALKLTLSG GMALQLATAERWKEVTGCAICEGYGMTETAPVVSVNPFQNIQVGTIGIPVPSTLCKVI GDDGQEVPLGERGELCVKGPQVMKGYWQRQEATDEILDADGWLKTGDIAIIQEDGYMR IVDRKKDMILVSGFNVYPNELEDVLATLPGVLQCAAIGIPDEKSGESIKVFVVVKPGA TLTKEQVMQHMHDNLTGYKRPKAVEFRDSLPTTNVGKILRRELRDEELKKAGQK" misc_feature complement(3695514..3697199) /gene="fadD1" /locus_tag="PA3299" /note="long-chain-fatty-acid--CoA ligase; Validated; Region: PRK05677" /db_xref="CDD:168170" misc_feature complement(order(3696531..3696536,3696540..3696557, 3696564..3696566)) /gene="fadD1" /locus_tag="PA3299" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341259" misc_feature complement(order(3695565..3695567,3695805..3695807, 3695838..3695840,3695847..3695849,3695883..3695885, 3696117..3696134,3696195..3696200,3696555..3696557)) /gene="fadD1" /locus_tag="PA3299" /note="putative AMP binding site [chemical binding]; other site" /db_xref="CDD:341259" misc_feature complement(order(3695622..3695624,3695805..3695816, 3695838..3695840,3695847..3695849,3695883..3695885, 3696117..3696134,3696195..3696200,3696261..3696263, 3696270..3696275,3696279..3696281,3696423..3696428, 3696555..3696557)) /gene="fadD1" /locus_tag="PA3299" /note="putative active site [active]" /db_xref="CDD:341259" misc_feature complement(order(3695622..3695624,3695640..3695642, 3695808..3695816,3696198..3696200,3696261..3696263, 3696270..3696275,3696426..3696428)) /gene="fadD1" /locus_tag="PA3299" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:341259" gene complement(3697434..3699122) /gene="fadD2" /locus_tag="PA3300" /db_xref="GeneID:882465" CDS complement(3697434..3699122) /gene="fadD2" /locus_tag="PA3300" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="long-chain-fatty-acid--CoA ligase" /protein_id="NP_251990.1" /db_xref="GeneID:882465" /translation="MQPEFWNDKRPAGVPDSLDFAAYRSVVEVFERSCKKFADRPAFS NLGVTLSYAELDRLSAAFAAYLQKQTDLQPGDRIAVQMPNVLQYPIAVFGALRAGLVV VNTNPLYTAREMRHQFKDAGVRALVYLNVFGKLVEEVLPDTRIEYLIEARMGDLLPAL KGWLVNSVVKSVKKMVPDYRLPQALPFRQALKQGQGHALQPVRVGLEDVAVLQYTGGT TGVSKGAMLTHGNLVANMLQVHAQLSQLGKDGLPLMKEAQEVMIAPLPLYHIYAFTAN CMCMMVSGNHNVLITNPRDIPGFVKELKKWRFSALLGLNTLFVALMEHPGFKDVDFSN LKLTNSGGTALVSATAERWKGVTGCTVVEGYGLTECSPVVTTNPYGEQARLGTVGIPV VGTALKVIDEQGNELPVGERGELCVKGPQVMKGYWQRPEATEEILDAEGWLKTGDIAV IDEDGFVRIVDRKKDLILVSGFNVYPNEIEDVVMAHPKVASCAAVGIPDEKSGEAVKL FVVARDPSLSVEELKAYCKENLTGYKIPRQIVLKDALPMTPVGKILRRELREIA" misc_feature complement(3697437..3699122) /gene="fadD2" /locus_tag="PA3300" /note="long-chain-fatty-acid--CoA ligase; Provisional; Region: PRK12492" /db_xref="CDD:171539" gene 3699369..3700319 /locus_tag="PA3301" /db_xref="GeneID:882466" CDS 3699369..3700319 /locus_tag="PA3301" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251991.1" /db_xref="GeneID:882466" /translation="MPAAAYWLPASDETPLYTRHWPSATAVGAVMLSHGMAEHAGRYE RLAAALNAAGYHFYAIDQRGHGRTAEADELGHFADQGGWGKVVGDLASLNHHIRQQHP ELPIFLLGHSMGSYISMAYLLHHSCSLQGAILSGSNYQPQALYRIARLIARFERWRQG PLGKSALIDFLSFGSFNKAFKPNRTAFDWLSRDPQEVDRYVADPLCGFRCSNQLWVDL LGGLADITPPTHLRQIDADLPLLIIGGERDPVSQGKRLGDLADALRGAGLRQVTLKTY PEARHELFNESNRDAVTQDLIDWLEQALRHRRDHSTKERT" misc_feature 3699450..3700232 /locus_tag="PA3301" /note="Serine aminopeptidase, S33; Region: Hydrolase_4; pfam12146" /db_xref="CDD:463473" gene 3700316..3700786 /locus_tag="PA3302" /db_xref="GeneID:882467" CDS 3700316..3700786 /locus_tag="PA3302" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251992.1" /db_xref="GeneID:882467" /translation="MSQVQNIPYAELEVGQKAEYTSSIAERDLQLFAAVSGDRNPVHL DAAYAATTQFKERIAHGMLSGALISAAIATVLPGPGTIYLGQTLRFTRPVKLGDDLKV ELEVLEKLPKNRVRMATRVFNQAGKQVVDGEAEIMAPEEKLSVELAELPPISIG" misc_feature 3700349..3700729 /locus_tag="PA3302" /note="(R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase...; Region: R_hydratase; cd03449" /db_xref="CDD:239533" misc_feature order(3700379..3700381,3700385..3700387,3700409..3700411, 3700415..3700420,3700424..3700432,3700511..3700513, 3700520..3700525,3700556..3700561,3700565..3700573, 3700577..3700579,3700583..3700585) /locus_tag="PA3302" /note="dimer interaction site [polypeptide binding]; other site" /db_xref="CDD:239533" misc_feature order(3700409..3700411,3700427..3700429,3700433..3700435, 3700442..3700444,3700493..3700495,3700499..3700501, 3700508..3700510,3700517..3700519,3700529..3700531, 3700562..3700564,3700571..3700573,3700577..3700579, 3700583..3700585,3700625..3700627,3700664..3700666, 3700670..3700672,3700703..3700705,3700721..3700723) /locus_tag="PA3302" /note="substrate-binding tunnel [active]" /db_xref="CDD:239533" misc_feature order(3700412..3700414,3700427..3700429,3700433..3700435, 3700442..3700444,3700487..3700489,3700496..3700501) /locus_tag="PA3302" /note="active site" /db_xref="CDD:239533" misc_feature order(3700427..3700429,3700433..3700435,3700442..3700444, 3700496..3700498) /locus_tag="PA3302" /note="catalytic site [active]" /db_xref="CDD:239533" misc_feature order(3700520..3700522,3700529..3700531,3700556..3700558, 3700562..3700564) /locus_tag="PA3302" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:239533" gene 3700937..3702112 /locus_tag="PA3303" /db_xref="GeneID:882468" CDS 3700937..3702112 /locus_tag="PA3303" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_251993.1" /db_xref="GeneID:882468" /translation="MDLRLLLLSLTTFAAGLAESILIGILPPLAEDLRVSISLAGQLT TLFSLGFALAAPLLGWLTRRIERRRLLLATLLLFALSNALAALAPGYLGLLLARLGMS ACCGLLIVLASLLAAELAAPAQRGRAIGLIFMGISGSLVFGVPLGVQISDWFGWRWIF AGIAVYSLPLCLLLWRYLPQRQAGDLPGREGYLRQLRQPALWLAQLVSILLLGGHFTL FAYFTPYLASMAGIRSPSEISLILLLIGLAALSGGYIGGWLADHLGHRRALRLVPAAF ALALAAVPLSLGSIGFLPVLMVWSAISWMISPVVQSFLLRSDPASGSAGVALNTSAMH LGVGLGAALGGLVVAALGVAATPWVGLALVLAALACALGASTLDGATQALPFSPPAR" misc_feature 3700967..3701938 /locus_tag="PA3303" /note="Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; Region: MFS_NepI_like; cd17324" /db_xref="CDD:340882" misc_feature order(3700979..3700984,3700991..3700996,3701003..3701005, 3701099..3701101,3701249..3701254,3701258..3701266, 3701273..3701275,3701333..3701335,3701342..3701347, 3701354..3701356,3701558..3701560,3701567..3701572, 3701579..3701587,3701594..3701596,3701681..3701683, 3701693..3701695,3701840..3701845,3701855..3701857, 3701867..3701869,3701912..3701914,3701921..3701926, 3701933..3701938) /locus_tag="PA3303" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340882" gene complement(3702093..3702950) /locus_tag="PA3304" /db_xref="GeneID:882469" CDS complement(3702093..3702950) /locus_tag="PA3304" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251994.1" /db_xref="GeneID:882469" /translation="MRASLRVVVTLLVVAAAVLAGIWLWRYYMLSPWTRDARVRADVV VVAPDVSGWVTDLEVKDNQVVKVGDVLMRIDQERYQANLEQARAVAETRHQQYLLRQN EAARRSRLGIGAISAEDKENAQINAAIARSEYQEALAQVKIAELNLKRSELRAARNGQ VTNLRLAQGNYATAGQAVMALVDQQSFYVVAYFEETKLPGIRVGMRAQVRLMSGDQPI DGTVESISSGITDRNSTPDGQLLANVEPTFNWVRLAQRIPVRIRLDQVPADVHLSAGM TASVTVQGD" misc_feature complement(3702099..3702878) /locus_tag="PA3304" /note="p-hydroxybenzoic acid efflux pump subunit AaeA; Region: PRK10559" /db_xref="CDD:182548" gene complement(3702977..3703180) /locus_tag="PA3303a" /db_xref="GeneID:17373371" CDS complement(3702977..3703180) /locus_tag="PA3303a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719765.1" /db_xref="GeneID:17373371" /translation="MSLHESAWGGVYLSPLFVYALLALAATAALRVLIQKTPLRRWVW HEALFDCALFILMLSGITWAATT" misc_feature complement(3703001..3703168) /locus_tag="PA3303a" /note="Protein of unknown function (DUF1656); Region: DUF1656; pfam07869" /db_xref="CDD:429704" gene complement(3703022..3703156) /locus_tag="PA3304.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965623" ncRNA complement(3703022..3703156) /ncRNA_class="other" /locus_tag="PA3304.1" /product="P18" /db_xref="GeneID:6965623" gene complement(3703167..3705161) /locus_tag="PA3305" /db_xref="GeneID:882470" CDS complement(3703167..3705161) /locus_tag="PA3305" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251995.1" /db_xref="GeneID:882470" /translation="MPIHWKPFLAPSTLALKFAIKTLLAGGLALWCAFRFDLEQPQWA LMTVLIVSQPLSGMVVAKGLFRLLGTLVGTAMSVLMIALFAQAPWLFLLAISLWLGLC TAASTSLRNHVSYAFVLSGYTVAIIGLPAVDQPLLVFEQAVARCTEICLGIICASAVS AILWPQRVEQNLDKQAHATWLLGMQAARGEIDPRQRQPQGLLNALSKIVEVDAQRDHA WFEGERGRRRAGALALLSRDLLSLLRTARGVARQRARLSEEEERRVERWLAALASALE GTDPASMQALREELAQVAVEPQWSNDQRYLLTRCSVLLLKAVNAEKGMRAVASGEVEG RVGSAGTLSWHRDLQMALFYGTRSALALLGLSVYWIYTAWPAASGAMLLAAVVCSLFA NRDNAVAIGLSFLRGIVYAIPAAMLVSQWLLPQWNGFPLLCLAMGVPLFFATLGMAVP VTAGTATSFAIHFIVLVAPRNQMDYNLATLLNSAQGVLIGVGFAVVIFRLLTLRPGWL TRRLLDATCVDLGRLTRRPLAQAENWFGGRMADRLLRLARHANLLPEQERRRWDDGLL ALDLGNELIHLRACLEGARGVLRKARDRFLGELGELLEAGPAGPRSDRLERISLPLRE ALERDARHDDEASRLARAALAQLLFTWQQWCHQEESHESA" misc_feature complement(3703191..3705116) /locus_tag="PA3305" /note="Fusaric acid resistance protein family; Region: FUSC; pfam04632" /db_xref="CDD:428044" gene complement(3705309..3705521) /gene="phrS" /locus_tag="PA3305.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /db_xref="GeneID:6965615" ncRNA complement(3705309..3705521) /ncRNA_class="other" /gene="phrS" /locus_tag="PA3305.1" /product="PhrS" /db_xref="GeneID:6965615" gene complement(3705890..3706492) /locus_tag="PA3306" /db_xref="GeneID:882471" CDS complement(3705890..3706492) /locus_tag="PA3306" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251996.1" /db_xref="GeneID:882471" /translation="MDLFADAPLTLPDADLRYLPHWLDAPLASAWLLRLEQETPWEQP ILRIHGEEHPTPRLVAWYGDPDAAYRYSGQVHRPLPWTALLGEIRERVEREVGQRVNG VLLNYYRDGQDSMGWHSDDEPELRRDPLVASLSLGGSRRFDLRRKGQTRIAHSLELTH GSLLVMRGATQHHWQHQVAKTRRSCMPRLNLTFRLVYPQP" misc_feature complement(3705899..3706489) /locus_tag="PA3306" /note="Alkylated DNA repair dioxygenase AlkB [Replication, recombination and repair]; Region: AlkB; COG3145" /db_xref="CDD:442379" gene complement(3706546..3706854) /locus_tag="PA3307" /db_xref="GeneID:882472" CDS complement(3706546..3706854) /locus_tag="PA3307" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251997.1" /db_xref="GeneID:882472" /translation="MLPPIPQGLIPVTVQQDPPKPRPATPPVAPTQAGAGSDGVALRQ ERDEESWLEEEYRRRQRRQGGEAHARSDEGDEAPADEAGESAQADELPRKGQLIDIEV " gene 3707090..3709942 /locus_tag="PA3308" /db_xref="GeneID:882473" CDS 3707090..3709942 /locus_tag="PA3308" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="RNA polymerase-associated protein RapA" /protein_id="NP_251998.1" /db_xref="GeneID:882473" /translation="MDMAQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTR QYALRNAPLTRVRFAPGDEVTHFEGWKMTVREVEESEGLLVYHGLTAQNEQRTLPETQ LSNFIQFRLASDRLFAGQIDPLPWFSLRYHTLERRSQLLQSSLWGLGGARAQPIAHQL HIAREVADRMAPRVLLADEVGLGKTIEAGLIIHRQLLSGRAGRVLILVPENLQHQWLV EMRRRFNLQVALFDKERFAESDASNPFEDTQLALVALEWLKEDERAQDALFAAGWDLL VVDEAHHLVWHQDQVSAEYALVEQLAEIIPGVLLLTATPEQLGQDSHFARLRLLDPNR FHDLEAFRRESEQYRPVAEAVQELLDHGSLSAGARKAIHGFLGSEGDELLASVEGGDE EARSRLVRELLDRHGTGRVLFRNTRAAVQGFPQRELHAYPLPMPSQYEELPAGEHPDL YPEVNFQQQWEDGDDNNRWWRFDPRVEWLIDTLKMLKQFKVLVICAHAETALDLEDAL RLRSGISATVFHEGMSILERDRAAAYFADEEFGAQVLICSEIGSEGRNFQFAHHLVLF DLPAHPDLLEQRIGRLDRIGQRHTIQLHVPHLENSAQQRLFQWYHQALNAFLNTCPTG NALQHEFGPRLLPLLDGGEDKAWDALLAEGRARREALEAELHSGRDRLLELNSGGAGE GEALVEAIEEQDDDFALPIYMERLFDAYGIHSEDHSENALILKPSEKMLDAGFPLGDD EGVTITYDRAQALAREDMQFLTWEHPMVQGGMDLVLSGSMGNTSVALIKNKALKPGTV LLELLFVSEAVAPRALQLGRWLPPQALRCLLDANGNDLAGRVSLETLNDQLESVPRVS ANKFVQAQRDVLAKQFDVAEGKIVPRHEERVARAKQQFAAAMDEELARLTALKAVNPS VRDSELDSLRTQREEGLALLDKASLRLEAIRILVAG" misc_feature 3707102..3709939 /locus_tag="PA3308" /note="RNA polymerase-associated protein RapA; Region: PRK04914" /db_xref="CDD:235319" gene 3710225..3710680 /locus_tag="PA3309" /db_xref="GeneID:882474" CDS 3710225..3710680 /locus_tag="PA3309" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_251999.1" /db_xref="GeneID:882474" /translation="MYDRILVAVDGSPVSDRALEEAIKLAGLSGGKLRVITIVDSPLR HLPDYAVYYNPEPLREAALKAADDVLAKAREKVEASNVEGATFDRVCQERASEEIAER IELEAQASDADVVVMGTHGRRGMRRLMLGSVAEGLIRVASRPVLLVRDK" misc_feature 3710225..3710668 /locus_tag="PA3309" /note="Nucleotide-binding universal stress protein, UspA family [Signal transduction mechanisms]; Region: UspA; COG0589" /db_xref="CDD:440354" gene complement(3710749..3712404) /locus_tag="PA3310" /db_xref="GeneID:882475" CDS complement(3710749..3712404) /locus_tag="PA3310" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252000.1" /db_xref="GeneID:882475" /translation="MGGGIKRFLPAIGSTRLVMLFALVLVVFYNAATWKALHGLVPLQ GLKGFAFFASFAAFLWAAFTLLLTLVSFRPLLKPALTLVALCSAGATYFMGSYGISID TVMVQNVFETNATEAGDLVNPTLLGYLLLLGVLPSLLIWLWPVRYRPFFRGLLNKILT LLGCLLIVAVMVGSFYSTYAPIFREEDKLTHFINPTNYIYAVGKYAKQRLVIKEHLVV EPIGLDARQAPAALQRQKKSLLVFVVGETARADHFSLNGYARETNPELSKQDIVNFTQ VRSCGTSTAVSVPCMFSQYPREDYSDKKAKTHEGLLDILQRAGVQVLWLENNSDCKGT CLRVPNRDIPKTQPSPFCDGKNCLDESLLVGLQEYIDGLQDDAIIVLHSDGSHGPEYY ERYPKEMERFQPVCRTNQLGSCSKEELVNVYDNTILYTDHFLTKVIELLKRNADKRDT AMIYVSDHGESLGENGVYLHAAPYSIAPQAQIHVPMVMWFAPQALGNWGIQRSCLDGK RDDKDLSHDNLFHSVLGLLDVQTSLYQPALDIFASCRAPRAAQ" misc_feature complement(3710764..3712389) /locus_tag="PA3310" /note="Phosphoethanolamine transferase for periplasmic glucans OpgE, AlkP superfamily [Cell wall/membrane/envelope biogenesis]; Region: OpgE; COG2194" /db_xref="CDD:441797" gene 3712560..3714911 /locus_tag="PA3311" /db_xref="GeneID:882476" CDS 3712560..3714911 /locus_tag="PA3311" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="signaling protein" /protein_id="NP_252001.1" /db_xref="GeneID:882476" /translation="MPFLPGKMPKPAVCRRPATSFHADLAGGSRYLYWKHNATPSPHP RRPRVFRVQGDTAMDWQGLRFLGESPVDGYVLQNCTYSPSLVALAFLVACLAGYTALD MVERVGNSLSHPRLWQWIGAFCLGSGIWATHFVAMLAFHAPIALRYDLPITGLSLLIA VAASYLTMYMTARPRFGLLPCLLAACCIGLGIAAMHYTGMAAMRSVATQYYQPSLFAL SVLIAIGAAFTALAAVPYLRGRRSARYRYMKLIASLLLAGAIAAMHFTGMAALVLSVP AGTPLELQASADSLRLGWLTGVLASAIAACGIWAAWSEKQRERRLSENSRVNALLNQL DHAHASLRQMARYDSLTGLQNRTAFNEVFVQHLENCRLRGKGLAVMFLDLDHFKRIND SLGHDSGDQLLKIVSERIRSVLRDSDVVARFAGDEFCVLADLTQDHEAHILSQRLMQK MKEPIALDGRTLVMTASVGVSLYPNDGEQCEELLKNAGLALHQSKACGRNNAQFFSRQ LLVRATQELQMEEELRQALRDDQLELHYQPILALADGEVHQLEALVRWRHPTQGLLGP DRFIGLAEANGMIDQLDDWVLRRACRDLRSLHLAGHERLRVAVNCCASNLGRASLVDE VRHALEQAGLAACFLELEVTEDALMYNIDQTIPLLERLRELGVSLSIDDFGTGYSSLA YLRRLPLDALKVDRSFIMDIPASQRDMEIAQAIIAMAQKLHLKVVAEGVETPQQLAFL RENHCELVQGYLFSRPLPLAALEEFLRAYRFDAAPPLRSLNQA" misc_feature 3712812..3714869 /locus_tag="PA3311" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" protein_bind 3712665..3712677 /locus_tag="PA3311" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3311" /bound_moiety="AmrZ" gene complement(3714915..3715805) /locus_tag="PA3312" /db_xref="GeneID:882477" CDS complement(3714915..3715805) /locus_tag="PA3312" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="3-hydroxyisobutyrate dehydrogenase" /protein_id="NP_252002.1" /db_xref="GeneID:882477" /translation="MSASLPSLAFAGLGLMGVPMCRRLLAAGYPLAVWNRSPGKRELL AAEGAKAVEVPAELAADAEILMLCLADTAAVREVVFGAGGIVENARPGQLLVDFSSAE PAATREMAAELEARCGVRWVDAPVSGGTPGAESGSLAIMAGGRAADIERLRPVLSRLG QRLTRMGEVGAGQVTKVCNQMIVACNALVIAEVVALAERAGVDASLVAPALAGGFADS KPLQILAPQMAESRYEPVKWHVRTLLKDLDTAVKLSREQGAATPMSGLAAQLMRLHGS QGYLERDPATLVEQYRTAVE" misc_feature complement(3714933..3715790) /locus_tag="PA3312" /note="3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase [Lipid transport and metabolism]; Region: MmsB; COG2084" /db_xref="CDD:441687" gene 3715804..3716811 /locus_tag="PA3313" /db_xref="GeneID:882478" CDS 3715804..3716811 /locus_tag="PA3313" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252003.1" /db_xref="GeneID:882478" /translation="MANSNTQRMGTGSAILPARRRRATPRRLPKRAAHHYTPRVFSAI EPENSPMLKRSLALAAGIALSLSAALAHAETLKELKVSAIPDEAPTELLRKFKPLGAY LEKQLGMPVKFVPVADYAGVVEALAADRLDMAWLGGFTFVQARLKTGNAIPLVQREQD QQFTSKFITADPQVKSLQDLKGKTFAFGSVSSTSGSLMPRYFMQKDGIVPEQFFSRVA YSGAHDATVAWVQAGKVDAGVLNASVWQKLVDSGKVDTAKVKVFATTPTYYDYNWTVR GNLDPALAEKIKQAFLALDPAKPADKEILDLQAASRFIETNPDNYKGIEESARAAGLL K" misc_feature 3716038..3716808 /locus_tag="PA3313" /note="putative selenate ABC transporter periplasmic binding protein; Region: ABC_peri_selen; TIGR04553" /db_xref="CDD:275346" gene 3716808..3717611 /locus_tag="PA3314" /db_xref="GeneID:882479" CDS 3716808..3717611 /locus_tag="PA3314" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phosphonates ABC transporter ATP-binding protein" /protein_id="NP_252004.1" /db_xref="GeneID:882479" /translation="MSLSLDGVDLVHADGQRALADIRLRLAAGERVALIGPSGAGKTS LLRVLASQWRPSAGRVELLGEEPWALSAAARQRLRARIGLVHQAPPLPPRQRVVSAVL AGRLGQWPLWKSLVSLVYPLDRAGAHDALQRLDLGDKLFQRCDQLSGGQLQRVGIARV LYQRAELILADEPVSAMDPVLAGHTLALLNREAAARGSTLLASLHAVDLALQHFPRVI GLRAGRIAFDLPAGEVDRAALDALYANEQLQAERASPAGEPAVMHIPRC" misc_feature 3716814..3717548 /locus_tag="PA3314" /note="ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]; Region: PhnC; COG3638" /db_xref="CDD:442855" gene 3717605..3718438 /locus_tag="PA3315" /db_xref="GeneID:882480" CDS 3717605..3718438 /locus_tag="PA3315" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phosphonates ABC transporter permease" /protein_id="NP_252005.1" /db_xref="GeneID:882480" /translation="MLNAASPPRDPAALPRLLLTLAALLLLWPGLRLSELDIPGLFSG DNARTMGGFLAGFWPPAHDPGFLALLGRATLETLAIATAGMALAWLLAFPAALLATRA LSLSALPRGGLPAWWARALRWPVRGLLILLRSVPEIVWALLFVRAVGLGPTAGVLAIA ITYAGMLGKVYAEIFESVDPRPTRALLLGGGSRLAAFAYGVLPNAAGEMISYTVYRWE CAIRASVVMGFVGAGGLGQQIDLSLRMFAGGEVASILLTFLLLVLLADLLSRFLRGRL A" misc_feature 3717707..3718366 /locus_tag="PA3315" /note="ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism]; Region: PhnE; COG3639" /db_xref="CDD:442856" gene 3718435..3719205 /locus_tag="PA3316" /db_xref="GeneID:882481" CDS 3718435..3719205 /locus_tag="PA3316" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_252006.1" /db_xref="GeneID:882481" /translation="MSRTWRLLLWPLLVVAAVGASFAYLDMDTAGLFSGKGLGQMAAY ASEFFPPDLSAPHLRAIGRGLLETLAMSAIGTLLAALLGLLFALPAAGRFGVPAQSLA RLLLNALRAVPELVWGALMVLAAGLGQNAGTLALALHTGGVLGRLFAEALENTPAQPA EALRLAGSGRLAAFAYGTLPGVWPQLVAYTLYRWENNIRMASVLGFVGAGGLGQMLYF SLSLFQQAQAATVILAMLVLVLGVDSLSAWARQRWVSQ" misc_feature 3718459..3719196 /locus_tag="PA3316" /note="ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism]; Region: PhnE; COG3639" /db_xref="CDD:442856" gene 3719329..3720057 /locus_tag="PA3317" /db_xref="GeneID:882482" CDS 3719329..3720057 /locus_tag="PA3317" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252007.1" /db_xref="GeneID:882482" /translation="MRKPLLSALLLGLLALGGCSLPQQQAGAPTEQRLGTQWGEGVAS PVTSVALRRLSEQPVDRRQVFYSASRFDGRAIKELPLAKGRVGFAVLDEDGGKFDLVQ HRSTLQLQGREGQRYRLWLNNLGSATYEVVATVDGLDVLNGQPGSLKNRGYVLEPGES LVIEGFRKNEREVAAFRFASPDDAYASNSAAGDSRNLGVIGVALFELDAPASGREAPA DGPQAFPADARNGGGYAPPPRYRD" gene 3720123..3720623 /locus_tag="PA3318" /db_xref="GeneID:882483" CDS 3720123..3720623 /locus_tag="PA3318" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252008.1" /db_xref="GeneID:882483" /translation="MNRFSLPRPDARQCVAGLGFSALLLLASSANAAACRDITSVQQS ADATRNTSMGGHVTQHIYGMTPPSGSSQKDKTLFKSRGNYDAAWRQYGYIDNPVACSG NSKFQVVSLEKLHMGKIDAYSCKQADGQGACTRWDTYMAKEISYGFVLKDGKWILNTL YPVPLD" gene complement(3720681..3722759) /gene="plcN" /locus_tag="PA3319" /db_xref="GeneID:882484" CDS complement(3720681..3722759) /gene="plcN" /locus_tag="PA3319" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="non-hemolytic phospholipase C" /protein_id="NP_252009.1" /db_xref="GeneID:882484" /translation="MISKSRRSFIRLAAGTVGATVATSMLPSSIQAALAIPAHRRHGN LKDVEHVVILMQENRSFDHYFGTLKGVRGFGDRMAIPLPDGQRVWHQKGSKGEILPYH FDTSTTSAQRVDGTPHTWPDAQQAWNEGRMDKWLPAKTERSLGYYKEQDIAFQFAMAN AFTICDAYHCSFQGGTNPNRLFLWTGTNDPLGQHGGPVTTNDHDSNGPVEQGYTWTTY PERLQAAGITWRVYQDMADNFSDNPLIGFRQYRAAAPDSPLIVNGLSTWKLDALKRDV LANSLPQVSWIVAPAKYSEHPGPSSPIWGAEYTSWVLDALTANPEVWSKTALLVMFDE NDGFFDHVAPPAAPSLNKDGTLRGKTTADATLEWHTKGDIRYRNQPYGLGPRVPMYVI SPWSKGGWVNSQVFDHTSVIRFLEQRFGVMEPNISPWRRAVCGDLTSAFNFANPNNEP FPELPDTSQADAIVASQIKLPKPKPPAVAAMPKQEMGIRPARALPYELGVHARYRSGG DALSLTFANTGKAGAVFQVFDLLDSENPPKRYTVGARKRLHDSFQGDASGDYHLEVHG PNGFLRVFRGNLRRDLAERKAPLPEVRIDYEPLFGNLRVQLINRGRHPVKLTVKDNVY RQGERRTVNVPPGQRREVRYSLRSSGNWYDFSVSAQGADSFLRRFSGRMEDGRSGFSD PGMGLGTLTF" misc_feature complement(3720702..3722747) /gene="plcN" /locus_tag="PA3319" /note="phospholipase C, phosphocholine-specific, Pseudomonas-type; Region: PC_PLC; TIGR03396" /db_xref="CDD:274561" gene complement(3722990..3723445) /locus_tag="PA3320" /db_xref="GeneID:882485" CDS complement(3722990..3723445) /locus_tag="PA3320" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252010.1" /db_xref="GeneID:882485" /translation="MPNYLMVLMAVSVGGMVVLQAGSNALLGRLLGHPLSASLTSLGV SLGVVSLGLLLVRVPLPATASLGGAPWWSWLGGLFGAAYLTVAILVAPRLGAATFIAC VVAGQMLVSALCDQFGWAGFPVRRLSWEGYLGLALVVAGVLLLQWRGRA" misc_feature complement(3723014..3723433) /locus_tag="PA3320" /note="Putative inner membrane exporter, YdcZ; Region: DMT_YdcZ; pfam04657" /db_xref="CDD:428052" gene 3723534..3724448 /locus_tag="PA3321" /db_xref="GeneID:882486" CDS 3723534..3724448 /locus_tag="PA3321" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252011.1" /db_xref="GeneID:882486" /translation="MQQIHDLRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHA LGRLRELFGDPLLVRVKSRMQLTSLALELAPKLQASLDQVRGVIGGPTFEPVRSRRHF RLGMSDYGAWVVLPALLRQQQALAPGVSFGIVQEPRLETARQVAEGQLDCALGVFPLL PEGVRARRLFEERFVCVCRRSLFDRPDGLSLDRYLAARHVRVSLQDNPAEEVDSALEK RGLRRQVALTLPHFTVAPALLAGTDLVLTIAERTLERLRLPEELALCEPPLAIPRFDY VQIWRGDAEREAAGAWLREQIQAAARKI" misc_feature 3723567..3723734 /locus_tag="PA3321" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 3723834..3724433 /locus_tag="PA3321" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator ToxR regulates the expression of the toxoflavin biosynthesis genes; contains the type 2 periplasmic bindinig fold; Region: PBP2_ToxR; cd08465" /db_xref="CDD:176154" misc_feature order(3723852..3723854,3723858..3723863,3723873..3723875, 3724047..3724049,3724158..3724160,3724359..3724361) /locus_tag="PA3321" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176154" misc_feature order(3723855..3723857,3723864..3723869,3723876..3723881, 3723888..3723893,3723897..3723902,3723909..3723914, 3723918..3723932,3723936..3723938,3724125..3724127, 3724209..3724223,3724230..3724235,3724242..3724247, 3724254..3724256,3724296..3724298) /locus_tag="PA3321" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176154" gene complement(3724456..3725154) /locus_tag="PA3322" /db_xref="GeneID:882487" CDS complement(3724456..3725154) /locus_tag="PA3322" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252012.1" /db_xref="GeneID:882487" /translation="MRNVRAYQDRGLLPPPERRGRVGVYFDSHLKRLRLISQLLERGY SSANIKELLEAWEQGRDLDHVLGLDQAIIGEWNLETPGSIGFDELQAIFGDELNDRVI DKAQALGLLLFDGERMKIPSPRLFQAGLELYRSGIPLEALLDQLGELRSDTEHLAAGI VRLIVTHLVDGRGTDLLPGAPDLQELAKVFLRLRPLAEHVVQVELARGLKLSANEMLG ERVGEMLRKLEKPS" misc_feature complement(3724528..3725151) /locus_tag="PA3322" /note="Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily; Region: HTH_MerR-like_sg2; cd04778" /db_xref="CDD:133405" misc_feature complement(order(3724882..3724887,3724894..3724896, 3724906..3724908,3724924..3724926,3724936..3724938, 3724999..3725001,3725026..3725031,3725041..3725043, 3725050..3725052)) /locus_tag="PA3322" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:133405" gene 3725580..3726455 /locus_tag="PA3323" /db_xref="GeneID:882488" CDS 3725580..3726455 /locus_tag="PA3323" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252013.1" /db_xref="GeneID:882488" /translation="MSQGAWVPTPDDLDHFRQVQRLAYTCCETIHGELRPGISEREAA ALMKTWLQDHGVDDWFHQPFAWFGSRTSFKGFDGLRHLGGFNLAFYPGKQRLEEGMPF ILDCAPTLGAYTADVGYSGALGHNLLQERLMDDLLIHRRTILDLVRERRPLAEVSQAV DRLCVIQGTLPRHKAYPFEVLAHRVEKLGNRRGPSVARFGVRNLYTLTRNALVTGKRE GWSPLWSSGKRSEHPPTSGLWAVEPHLGLRGVGAKFEELLVVTEDDAYWLDDDLPHVR RWQARGLLPQAREAA" misc_feature 3725616..3726368 /locus_tag="PA3323" /note="A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity...; Region: APP_MetAP; cd01066" /db_xref="CDD:238514" misc_feature order(3725841..3725843,3725892..3725894,3725925..3725927, 3726159..3726161,3726303..3726305,3726342..3726344) /locus_tag="PA3323" /note="active site" /db_xref="CDD:238514" gene 3726452..3728230 /locus_tag="PA3324" /db_xref="GeneID:882489" CDS 3726452..3728230 /locus_tag="PA3324" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_252014.1" /db_xref="GeneID:882489" /translation="MNALLALPDLQPERLFVQSGDVRLAVHCWGAPDNGKPTLLMVHG YPDNHETWLPLIRQLAGRYRIVAYDVRGAGASDKPRWSRDYHLQRLSEDLQAVIRATS PDRPVHLLAHDWGSIQTWESVTDPQCRPLIASYTSISGPCLDHVGFWMREHLRQRSPK ALKAVFGQLLHSWYIAFFHTPVVPELLWSAGLARLWPQFLKHAEGVRHPQVNPTQASD GRHGVKLYRGNFIRSLFRPRKRHTEVPVQLIVPTRDRYVGAQLFQHLSLWAPRLWRRE ASVGHWQLLAEPEQLAGWLGEFIDAQETGESPPALQRAQVRPDASSMNGKLVVVTGAG GGIGRSTLLSFAERGASLLAADLDLEAAERSAELARALGATAHVYQVDVGDTQAMETF AEWVRDTLGVPDVVVSNAGIGMAGPMLDTSPAEWERLLRVNLWSVIDGCRLFGRQMIA ANKPGHLVNVASGVAFAPSRNYPAYATSKAAVLMLSECLRAELAGRSIGVTAVCPGFV DTGIVQATRFVGMDAERQARRQAKIQRFYKRRRLSPDTVGEKLVRAVERNKAVVSVGS EVHLGALQWRFAPWATRFLARFDLTS" misc_feature 3726482..3728227 /locus_tag="PA3324" /note="SDR family oxidoreductase; Region: PRK05855" /db_xref="CDD:235628" gene 3728240..3729127 /locus_tag="PA3325" /db_xref="GeneID:882490" CDS 3728240..3729127 /locus_tag="PA3325" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252015.1" /db_xref="GeneID:882490" /translation="MSEFHHKLVQRKVRFDFSDTPLHWVPGEAEASQVMNVLHMLLPS GELWFCRLYNKALPLVSDARLRDDVQGFIRQEAMHSRAHDGAIQRYLSRFDIDSKPFT DKMDFLFERLLCDYPLGQNRLTRALDGWWLRQRCAIIAAVEHFTCVLGKWVLEARELD RRGSDPVMLDLLRWHGAEEVEHRSVAHDLHVHLGGSFVTRQLTMLLVIAILVYLLADG TRTLLDQDPSLRGAKRQGFLRTWWRLGKQGLLPNLARTFRDVARYFNPWYHPEHEANT QEALEYLANSPAARRAANA" misc_feature 3728270..3729058 /locus_tag="PA3325" /note="Predicted metal-dependent hydrolase; Region: Metal_hydrol; pfam10118" /db_xref="CDD:431068" gene complement(3729471..3730076) /locus_tag="PA3326" /db_xref="GeneID:882491" CDS complement(3729471..3730076) /locus_tag="PA3326" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease proteolytic subunit" /protein_id="NP_252016.1" /db_xref="GeneID:882491" /translation="MKTDDKDREGGDSHGAIGAKLMEYALKVRKVFVTGGVDEKMAKD VVQQLHILASISDDPIYMFVNSPGGHVESGDMIFDAIRFITPKVIMIGSGSVASAGAL IYAAADKENRYSLPNTRFLLHQPSGGIQGPASNIEIYRREIVRMKERLDRIFAEATGQ TPEKISADTERDFWLNAEEAVQYGLVNKIIVSEREITLPGQ" misc_feature complement(3729486..3730076) /locus_tag="PA3326" /note="ATP-dependent Clp protease proteolytic subunit; Reviewed; Region: PRK12553" /db_xref="CDD:237133" misc_feature complement(order(3729555..3729557,3729561..3729563, 3729630..3729632,3729636..3729638,3729642..3729644, 3729651..3729653,3729693..3729704,3729720..3729722, 3729726..3729728,3729792..3729794,3729816..3729818, 3729828..3729833,3729840..3729842,3729849..3729851, 3729861..3729863,3729882..3729884,3729924..3729926, 3729933..3729938,3729945..3729950,3729975..3729977, 3729981..3729983)) /locus_tag="PA3326" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:132928" misc_feature complement(order(3729561..3729563,3729708..3729710, 3729783..3729785)) /locus_tag="PA3326" /note="active site residues [active]" /db_xref="CDD:132928" protein_bind complement(3730299..3730314) /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA3326" /bound_moiety="LasR" gene 3730557..3737615 /locus_tag="PA3327" /db_xref="GeneID:882492" CDS 3730557..3737615 /locus_tag="PA3327" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="non-ribosomal peptide synthetase" /protein_id="NP_252017.1" /db_xref="GeneID:882492" /translation="MVRFARLPLSPYQRDIWVAAAQFPELDQYTIFSYDRFTGEVDTQ ALERALLQAARDTEAFRLRLGETDGTPYQWLDTDAEFEARHVDLRADRDPEAAVRSWL RDAFRHAYPLDGRSLVDLALLHSDQALYVYVRTHHIVSDAWGLQLFLSRVRAGYLGEL GEPQAQMPTASLLAQLETDDYSGSEQYRGDRAYFAEALEGLEPALFTRRRPAGLRRTA RHRLTLERTLLDAIRDRGESPFLFLSAAVALYLARIHQNDDVVLGVPVLNRADRAAKQ VVGHFANTLPLRIRTAPEQTVDEFLAQLREATRTLLRHQKMPLGDLLRGASPLFDTTL SYMRWPAAQAIPNASVETVAQTHAHDPDALAIWVSEFDGHSDAQVDFEYACDVFDADF PMDAAARHIETFLRALVEGGERRLGELDPLSAAEREELIHTRNATDQAFPEQATLPTL FAEQVARTPQRTALLEADGGTLSYAELDAKVQAVADALRAAGVRTDERVALLVARGPH LLPAILGVQRAGGAYVPINPDHPLERVRLLLEDCGARVVLVDERAATLGESLGETRVL HLERLPQSTGDLPAANVAPGDLAYVIYTSGSTGMPKGVMVEHRSVVNRLNWMQRRYPI GERDVLLQKTPVTFDVSVWELFWWSFTGARLSLLPPGAEKDPREMLRSIQRDAVTVIH FVPSMLTPFLDLLDGDPTARAAASSLRLVFCSGEALAPLQVARFRRLFGDAVRLVNLY GPTEATVDVSDHECASDNPTRVPIGRPIDNLRLYVLDRALRPQPLGAVGELYIGGVGV ARGYLNRPELNAERFLVDPFVAGGRLYRTGDLARWLADGNLEYLGRADDQVKIRGNRV EPDEVRDRLAALPGVRDAAVVARDSAVRGTHLVGYYVAAAELDPGQLRAGLSATLPDF MLPAFFVRIDSLPLSANGKLDRRQLPAPPEQVAAVAPRTATEAELAAVWADVLGVAEV GVHDDFYALGGDSILMLRIRAAAQRRGLGFELADLMRNPTVAGLAERLVRPLAERSYQ PFELVSEVDKPRLEGLEDAFPTSRLSLGLLFHSRQRPDSSVYHDVFHYRFDLAWDEAA FRHALDRVVAAYPALRSSFDLSGASEPLQLVHTQARSEPLILDLRGNPEAGTVLDEHI RQRRFHRYSLQQPGLFLFAAFVREDGLDLVFSFHHAILDGWSVANLIVALVAAYRGEP LPGPAPALACHVREELAALASPAAVGYWTGLLEGARMTRLDGFGAHEPQAAQGPASHR EALPDGLLERLKATAAQRGLPLKSLLLAAHCLTLHLFSRSDSVVTGAISNGRPELPDA DRMVGLFLNTVPVRSEIAGCSWIEVADALFRQERDGHAHRRYPLSAIQQIVGDELSSA FNYVNLHVLEPLWQLRDFRVWEETNFALLVNVIATPSDGMYLRIDSDGRGISRSQAAL IGATFVELLWRLADHPDEAADFAFLAPRRDAASQPEPLVDVVSLFERQVEALPGSAAL AFEEQRWTYRDLDHVARCVATRLVRAGARRGDAIGVALNRSPEMIATIWGILRAGLVC VPLDVSYPAQRLALILETAQPFRVVAHPEHAHVAAAERVLPVEELVADIEPETFAAPQ LDELAMLLFTSGSTGRPKGVELSHRMWANYTQWQLRVASGVPGLRTLQFAPLSFDMAF QEIFSTLCGGGELQLISNRERMDPSALLHVLERRQVQRVLLPFVALQRLAEASNALGV RPGALRVVVSSGEQLRITEDVRAFCAAMPGLLLENQYGPTETHQVTYHSLSGDPAHYP DLPPIGRPLDGVEVQVLDAALRPVPVGVTGELYFGGDCLARGYHRAPKLTAERFVEHP WRPGARLYRTGDLGRILGNGEIVWLGRADTQVKVRGFRIEPAEVELAIMRQAERQPGL RGAAVVARERQGNDAFLAAFLLGEPEAVDLAELKQALRSELPEHMVPAHFAWVDGFAL TPSGKRDDAALRALPLEHGTNIEYLAPRDDYERTLAGLLGELLDRPRVGIRDSFFDLG GTSLSAMRFMLLIEKRYGVDLPMAALIETPTVEGLAERLRERSAVRAFDPLVPIRAGG SRPPLFLVHPLGGHVLCYLPLVRALPPDQPVYALQAAGTGQGSTPLAVLEDIAASYLA AIRRVQPEGPYYLGGWSFGGFVAYEMARQLRALDPQAVAQLIVLDSITVDRNHAGSAS DEALLLFFYWELVWFERSDKEVEPLPEGASLEQKLDHIVERAIEAGVLPAGTPRATVQ RLYELFRASWQALIGYRPEVSDQDMTLLRADGPLPLALKPMHDAAGTHYGDPKNGWQH WTSGRLDVIDVPGDHLVLMKEPYVETVAAEIAALLEPSTSSERTRP" misc_feature 3730566..>3736772 /locus_tag="PA3327" /note="peptide synthase; Provisional; Region: PRK12467" /db_xref="CDD:237108" misc_feature 3736785..3737579 /locus_tag="PA3327" /note="A functionally diverse superfamily containing proteases, lipases, peroxidases, esterases, epoxide hydrolases and dehalogenases. The catalytic apparatus typically involves three residues (catalytic triad): a serine, a glutamate or aspartate and a...; Region: alpha/beta hydrolases; cl21494" /db_xref="CDD:473884" gene 3737612..3738778 /locus_tag="PA3328" /db_xref="GeneID:882493" CDS 3737612..3738778 /locus_tag="PA3328" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="FAD-dependent monooxygenase" /protein_id="NP_252018.1" /db_xref="GeneID:882493" /translation="MSRHPLKIVIAGAGIGGLAAAACLKAAGFEVELYERARELRAVG SALSLMPNALTALERVGVRPDLTRAQAFDSLRFLTRRGRPIRAIDFGGLARQLGQPSL AIHRASLQQALLEQARDCRIELGVSATGYLRHADGEGVTVLCSDGREVHADVLIGADG FNSAIRATMTGPERPTDWHYVIWRATPAFRHPKVTPGYVAHYWGRGQRFGLADIGEGN VYWWGTRNMPAEQAKDWRGGKAGIQRLYAGWADEVQAVIEATPEADISSLPAQDRPFL ERWGDGPVTLLGDAAHPMLTSLGQGAAIAIEDAAVLAHCLATIDDPQAALRAYENRRR DRARAMVETSRALSRIEQLEHPLRTVARDLYFRFAPERTFARQNELALTFPGVE" misc_feature 3737693..3738751 /locus_tag="PA3328" /note="2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; Region: UbiH; COG0654" /db_xref="CDD:440419" gene 3738775..3740103 /locus_tag="PA3329" /db_xref="GeneID:882494" CDS 3738775..3740103 /locus_tag="PA3329" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252019.1" /db_xref="GeneID:882494" /translation="MMAEIRRPLSAVERWYWLSDQFSALNVISRVRVHGRLSIDDLRR GLDALQARHPLLRARIEHDAGLDPRWVPCERPIPLREVRGGGEEQWLREINERELPER IDPDSGPLIRTVAIATDAGAHDLLVVVPHIIADGTTVLTLAEQWLTLAADPAAQPWTA SALPPAEDLRPRRFTGDEGAARLAEQTAQDEALVGRHRPGRIEPSNPVPLEARRTRLL HRELDGAQLEQLQRRAREHGTTVHGALTAALAIAAGHDHQRRPSHIAIGSPIDFRDEL EPPVRPDEVGTYVATVPVVLDIARPFWEVARALTDDLGERRRQGHHFNLVTLVASAAP RCMADARPFMAFMEAEGPINLCSSNIGRYPFPERIGALRLSDAQFLTGISVNGYFVAA INSSHGRLFWNFTYIDEAVPGERAERLAEDCLGTLLSAIHAPQRSALEEQ" misc_feature 3738799..3739497 /locus_tag="PA3329" /note="Uncharacterized conserved protein, contains a NRPS condensation (elongation) domain [General function prediction only]; Region: COG4908" /db_xref="CDD:443936" gene 3740105..3741019 /locus_tag="PA3330" /db_xref="GeneID:882495" CDS 3740105..3741019 /locus_tag="PA3330" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_252020.1" /db_xref="GeneID:882495" /translation="MLFTSKPLSPQGRHVLITGASSGLGRETALHLAEQGFQVIAGVR RQEDGERLANACPSGRISTLLIDVTDEESIGRAAAQVAEKVGDTGLWGLVNNAGICIS APLECVSSDLLRRQLEVNLIGQLAVTRAILPLLRRGGAARLVNVTSGLGSVAIPYLGA YSAAQFAKEGVSDALRRELAPMGIQVSVVSPGAIWTPIWGKIASEGERALADAPDAVA DLYRDTYLRFLQANEDGARNSATKPADVAAAVHAALTAAKPRTRYRVGADVRRGTLLA RLLPDSVIDGMFRPIVTAAPAAKEEQRA" misc_feature 3740147..3740908 /locus_tag="PA3330" /note="A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous...; Region: Rossmann-fold NAD(P)(+)-binding proteins; cl21454" /db_xref="CDD:473865" misc_feature order(3740159..3740161,3740165..3740170,3740174..3740176, 3740231..3740239,3740390..3740398,3740540..3740548, 3740585..3740587,3740597..3740599,3740675..3740686) /locus_tag="PA3330" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature order(3740462..3740464,3740546..3740548,3740585..3740587, 3740597..3740599) /locus_tag="PA3330" /note="active site" /db_xref="CDD:187535" gene 3741012..3742268 /locus_tag="PA3331" /db_xref="GeneID:882496" CDS 3741012..3742268 /locus_tag="PA3331" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome P450" /protein_id="NP_252021.1" /db_xref="GeneID:882496" /translation="MPDRKLRLGEELISPLHALYDGLQVDGAPRPAHRAAEHPVWVVT RYRDARKVLNHPGVRRDARQAAELYAKRTGSPRAGIGEGLSHHMLNLDPPDHTRLRSL VGRAFTPRQVERLQPHIERITEALLDAMAGREQADLMADFAIPLTIAVIFELLGIPEA EREHARQSWERQAELLSPEEAQALADAQVDYLRVLLEAKRRQPADDVYSGLVQAADES GQLSEAELVSMAHLLMMSGFETTMNMIGNALVTLLVNPEQLALLRAQPELLPNAMEEL VRHDSPVRASMLRFTVEDVELDGVTIPAGEYILVSNLTANHDAERFDDPDRLDLTRNT DGHLGYGFGVHYCVGASLARLEGRIAIQRLLARFPDLQLAVPHAELQWLPITFLRALI SVPVRTGCSAPANTASHANPIERIAQ" misc_feature 3741057..3742202 /locus_tag="PA3331" /note="cytochrome P450 family 107 and similar cytochrome P450s; Region: CYP107-like; cd11029" /db_xref="CDD:410655" misc_feature order(3741168..3741170,3741189..3741191,3741273..3741278, 3741297..3741299,3741309..3741311,3741330..3741332, 3741705..3741710,3741717..3741719,3741729..3741734, 3741741..3741743,3741840..3741842,3741855..3741860, 3741867..3741872,3741876..3741878,3741945..3741947, 3742026..3742034,3742041..3742046,3742050..3742058, 3742068..3742070) /locus_tag="PA3331" /note="heme binding site [chemical binding]; other site" /db_xref="CDD:410655" misc_feature order(3741189..3741191,3741255..3741257,3741261..3741263, 3741270..3741272,3741276..3741281,3741525..3741530, 3741552..3741554,3741702..3741707,3741714..3741719, 3741729..3741731,3741858..3741860,3741867..3741875, 3742173..3742175) /locus_tag="PA3331" /note="chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:410655" gene 3742265..3742690 /locus_tag="PA3332" /db_xref="GeneID:882497" CDS 3742265..3742690 /locus_tag="PA3332" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252022.1" /db_xref="GeneID:882497" /translation="MNAKEILVHSLRLLENGDARGWCDLFHPEGVLEFPYAPPGWKTR FEGRETIWAHMRLFPEHLTVRFTDVQFYETADPDLAIGEFHGDGVATVSGGKLAQDYI SVLRTRDGQILLYRDFWNPLRHLEALGGVEAAAKIVQGA" misc_feature 3742268..3742654 /locus_tag="PA3332" /note="Ketosteroid isomerase-related protein [General function prediction only]; Region: YesE; COG3631" /db_xref="CDD:442849" gene 3742694..3743686 /gene="fabH2" /locus_tag="PA3333" /db_xref="GeneID:882498" CDS 3742694..3743686 /gene="fabH2" /locus_tag="PA3333" /EC_number="2.3.1.180" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-oxoacyl-ACP synthase III" /protein_id="NP_252023.1" /db_xref="GeneID:882498" /translation="MPRAAVVCGLGSYLPEAVLSNDMLAAELDTSDAWISSRTGVRQR HIAGDLGSGDLALRAASAALASAGLERVDAVVLATSTGDFCCPATAPRVAARLGLVGA LAFDLSAACTGFVYGLASVGSLISAGLADSALLVGVDTFSHTLDPADRSTRALFGDGA GAVVLRAGDAEEEGALLAFDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVF GQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRILAAVADQLDLPVERVVSNIAE VGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALRWPKIVPTMD" misc_feature 3742700..3743662 /gene="fabH2" /locus_tag="PA3333" /note="beta-ketoacyl-ACP synthase 3; Region: PRK09352" /db_xref="CDD:236475" gene 3743700..3743939 /locus_tag="PA3334" /db_xref="GeneID:882499" CDS 3743700..3743939 /locus_tag="PA3334" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl carrier protein" /protein_id="NP_252024.1" /db_xref="GeneID:882499" /translation="MPNDMEDHLLTVLSVASGVPKEEISRDSRMEDLAFDSLVVSELS LKLRKEFGVTGVDDELDLLETVDELFQLVEKHRAA" misc_feature 3743706..3743933 /locus_tag="PA3334" /note="Acyl carrier protein [Lipid transport and metabolism]; Region: AcpP; COG0236" /db_xref="CDD:440006" gene 3744057..3744809 /locus_tag="PA3335" /db_xref="GeneID:882500" CDS 3744057..3744809 /locus_tag="PA3335" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252025.1" /db_xref="GeneID:882500" /translation="MSQNMDLTIGTHRESAFYELEFGPRTIMTLANFPDDVLPLLQME SLMTFEAMAYLRCDALVELGCYDGRALEIARLLNARYLGVDLDQRAIETLRTRIEREG MSDRADTVVDDILNHTRRGASVGSRALYLLPFNLLGNFREPKRLLDSLAERSVAAVVS VFGDSAEATRVRQSYYRRCGVQGLELHTRDDGTVFTGSDGFYSRSYSRACLHALLAEC GLTVVRSASNLFAHCVTVLPEGADQGFGSSAA" misc_feature 3744102..>3744434 /locus_tag="PA3335" /note="Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism]; Region: Cfa; COG2230" /db_xref="CDD:441831" gene 3744901..3746067 /locus_tag="PA3336" /db_xref="GeneID:882501" CDS 3744901..3746067 /locus_tag="PA3336" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_252026.1" /db_xref="GeneID:882501" /translation="MPLIVYVLGAAIFALTTSEYMVAGLMPALAAEFGVSFAAIGYLV TFYAGAMAVGGPLLTTALLRVPRKNALLGLIALFVVGQVIGALAPGYAVMVAARLVTA VAAAAFFGVALTACAELVEGNQFGRASSLVLGGLMVGTVLGLPVATWLGEWYGWRASF FAVALVAVLVGLLVLQLMPAIPGSAGSGSLREELKVFRNAHLWWVYATSLLLIGATFA GFTYFVPILTEVSGFSASTVPLLLVVYGLATLVGNNIVGRLADRHTIAVLAFGLLAAI AAMVAFALFGQVPAVAVAALVVIGLTGVSMNPALVTRGARVGHNNMLVNSVHTACIML GVMAGSWIGGLGIAGGFGLQGALWVGAALGVLALLTLLPELRFARAPVGGALGR" misc_feature 3744913..3745923 /locus_tag="PA3336" /note="Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; Region: MFS_NepI_like; cd17324" /db_xref="CDD:340882" misc_feature order(3744943..3744948,3744955..3744960,3744967..3744969, 3745063..3745065,3745213..3745218,3745222..3745230, 3745237..3745239,3745297..3745299,3745306..3745311, 3745318..3745320,3745525..3745527,3745534..3745539, 3745546..3745554,3745561..3745563,3745645..3745647, 3745657..3745659,3745804..3745809,3745819..3745821, 3745831..3745833,3745873..3745875,3745882..3745887, 3745894..3745899,3745906..3745908) /locus_tag="PA3336" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340882" protein_bind complement(3745700..3745712) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(3746078..3747076) /gene="rfaD" /locus_tag="PA3337" /db_xref="GeneID:882502" CDS complement(3746078..3747076) /gene="rfaD" /locus_tag="PA3337" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ADP-L-glycero-D-mannoheptose-6-epimerase" /protein_id="NP_252027.1" /db_xref="GeneID:882502" /translation="MPMSIIVTGAAGFIGSNLLQALNRRGETDIIAVDDLTDGEQFRN LADADIADYLDQNDFLERYARGDFGTVRALFHQGACASTLESNGRYMMENNYRYSCRL LESSLELGVPFLYASSAAVYGSGRTFREARQYERPLNVYGYSKFLFDQRVRRALPQAR SQVVGLRYFNVYGPREEHKGRMASVAYHCYQQLRRDGRVELFGEHGGFPPGGHLRDFV AVEDVARVNLHFFDHPQRSGIFNLGSGQARTFNEVALAVINSVRANADQPPLSLQQAV ESGLLGYREFPESLRARYQSHTCADLELLREAGYRDDFQSLEEGVAGYCRWLARSA" misc_feature complement(3746087..3747064) /gene="rfaD" /locus_tag="PA3337" /note="ADP-L-glycero-D-manno-heptose-6-epimerase; Region: heptose_epim; TIGR02197" /db_xref="CDD:274028" gene complement(3747166..3747456) /locus_tag="PA3338" /db_xref="GeneID:882503" CDS complement(3747166..3747456) /locus_tag="PA3338" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252028.1" /db_xref="GeneID:882503" /translation="MPTAKPEIVITYCTQCQWLLRAAWLAQELLSTFADDLGKVCLEP GTGGVFRITCDGVQVWERKADGGFPEAKALKQRVRDRIDPQRDLGHNDRPSR" misc_feature complement(3747172..3747450) /locus_tag="PA3338" /note="Predicted selenoprotein, Rdx family [General function prediction only]; Region: COG3526" /db_xref="CDD:442748" gene 3747525..3749711 /gene="plpD" /locus_tag="PA3339" /db_xref="GeneID:882504" CDS 3747525..3749711 /gene="plpD" /locus_tag="PA3339" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="patatin-like protein" /protein_id="NP_252029.1" /db_xref="GeneID:882504" /translation="MRRLLLVLLLLLPLSALAAEARPKIGLVLSGGAARGLAHIGVLK ALDEQGIQIDAIAGTSMGAVVGGLYASGYTPAELERIALEMDWQQALSDAPPRKDVPF RRKQDDRDFLVKQKISFRDDGTLGLPLGVIQGQNLAMVLESLLVHTSDNRDFDKLAIP FRAVSTDIATGEKVVFRKGHLPQAIRASMSIPAVFAPVEIDGRLLVDGGMVDNIPVDV ARDMGVDVVIVVDIGNPLRDRKDLSTVLDVMNQSITLMTRKNSEAQLATLKPGDVLIQ PPLSGYGTTDFGRVPQLIDAGYRATTVLAARLAELRKPKDLNSEALDVARTPNQRKPV IDAIRVENNSKVSDEVIRHYIRQPLGTRLDLGRLQDDMSTLYGLDYFDQVQYRVVKEK KLNTLVIHATGKKGGTDFLRLGLNLSDDMRGESTFNLGGSYRMNGLNRLGAEWLTRVQ LGDRQELYSEFYQPLDVGSRYFVAPFLFHEAQNVDVTEDNDPLLRYRLERYGYGLNVG RQIANNGEIRLGAVQAYGKADVRIGDPSLPDIDFTEGYYELKYSFDTVDDVNFPHEGE EIGLTMRRYDKSLGSDDSYRQWDLRLNKALSFGADTWVFGGGYGRTLDDAEVVTSSFT LGGARELSGFRRDALSGQNYSLGRIVYYRRLTERSFLPLDFPLYLGGSIERGRIWNND NEYDSGYINAASLMIGFDTPLGPLTFSYGINDENFKAFYLNLGQNF" misc_feature 3747588..3748427 /gene="plpD" /locus_tag="PA3339" /note="Predicted acylesterase/phospholipase RssA, containd patatin domain [General function prediction only]; Region: RssA; COG1752" /db_xref="CDD:441358" misc_feature <3748515..3749708 /gene="plpD" /locus_tag="PA3339" /note="Outer membrane protein assembly factor BamA [Cell wall/membrane/envelope biogenesis]; Region: BamA; COG4775" /db_xref="CDD:443807" gene complement(3749719..3751767) /locus_tag="PA3340" /db_xref="GeneID:882505" CDS complement(3749719..3751767) /locus_tag="PA3340" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252030.1" /db_xref="GeneID:882505" /translation="MPGKALRVMLCAWSCLLAGQASALGVGDIILHSALNQPLDADIE LLDVGDLGADEIEVRLAGADVFAAAGVERLQFLNELRFSPVLQGRGGNRIHVSSIRPV QEPYLNFLVEVARPNGRIVREFTVLLDPLGYTPRMLPAARSGIEPQRQSSTPVPAPRS AAVVVDPALLEPGDEYLARPSDNLWAISGRLRGAGNADRAQLMEALYQLNPQAFVNAD RHRLKAGARLRLPAGYQPERGAPGAVKEAAVEVLPPADAAVVENAPAALVEAQRQADA EAEALARQREELSQRMDDLQRQLQALQEQLQQRDHQVAELQQQLARRQAVRPAAPPPA AAAPSVAQPVETPTDSQYWRWMIVLLLVLALLGVLLLRRRREEAPVPAVEPKRRVALN LPLRRAPRPPAAAPAPAKVEEQARPPVAAPSSPPPSPPPAPAAAPRAAMAAADKLDGA DIYIAYGRYGQARDLLRQVLAEQPQRLSARMKLLLVLAELGDAAGFDALAEETLASGG NPEAIDELRGRYPALLQMPATETPAATTKDDDWSDLPLAESPVLQQPDATSGADGFGD LNLDLDLDWGALENPLDNPDLPRRAAAGKAEPAEEPLAFESNLHELPDVAEYEHLELD QPEPATVPPEEASASLDRARACIDSGDLDQASRILRLVVAHGDPWQKAEARELLALIA " misc_feature complement(3750124..3751725) /locus_tag="PA3340" /note="Type IV pilus assembly protein FimV [Cell motility, Extracellular structures]; Region: FimV; COG3170" /db_xref="CDD:442403" misc_feature complement(3749725..3749856) /locus_tag="PA3340" /note="FimV C-terminal domain; Region: FimV_Cterm; TIGR03504" /db_xref="CDD:274614" gene complement(3752044..3752478) /locus_tag="PA3341" /db_xref="GeneID:882506" CDS complement(3752044..3752478) /locus_tag="PA3341" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252031.1" /db_xref="GeneID:882506" /translation="MAQTDKHYFGTLLAQTSRAWRAELDRRLSHLGLSQARWLVLLHL ARHRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADV LIADIEAIAASVRNDVLTGIDESEQALCQQVLLRILANLENR" misc_feature complement(3752053..3752451) /locus_tag="PA3341" /note="helix_turn_helix, cAMP Regulatory protein C-terminus; DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family; Region: HTH_CRP; cl46859" /db_xref="CDD:481199" gene complement(3752596..3753612) /locus_tag="PA3342" /db_xref="GeneID:882507" CDS complement(3752596..3753612) /locus_tag="PA3342" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252032.1" /db_xref="GeneID:882507" /translation="MQRLIQANGQPHYGIFPSAPQHINYRDFDFRSPMGRRVGALGKW RRFHQFQYFGLISPELIGGCALAQLSLLGVGFVYLYQPSSGRMLERRFKLPLGFGTRF SQTPDDGVCELRQGRNLLRLENRMAHREKRLLVELDDGTRIDACFSEEAPSFQPMCLC TPTAVNGWVYAQKVAGVRCRGDVRSALGDHDLQALDAFAHHDWSAGYMRPETFWNWAC LSGEADGLRVGLNLSCGVNETSFTENCYWLDGELLKVDSVRFDFDRDQPLRPWTIRSY DGQVELRFEAHGMHQERLNLGLLASNFKQIFGCFSGVLRPRGRAEVRIERLWGFVEDQ YAKW" misc_feature complement(3752602..3753591) /locus_tag="PA3342" /note="Protein of unknown function (DUF2804); Region: DUF2804; pfam10974" /db_xref="CDD:431569" gene complement(3753763..3754932) /locus_tag="PA3343" /db_xref="GeneID:882508" CDS complement(3753763..3754932) /locus_tag="PA3343" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252033.1" /db_xref="GeneID:882508" /translation="MCVTQKDRLDDSRSNLYADQLNRGFRGLRFLPELERDYRRYMLE DSFALKRIALSVGMLVWLAFIGIDLLILAGPPLWGVLAVRLGVLVLLLVCGCLIMLRR HIQLMVPLSIACVLALGVGAAAVVGLAHRADPGYPYEGLLLVSFAAYFLAGLRLSQAL SCALVVLLAYLGFEWWAGTQEPLGNNLLFLLFGNLIGAVGCYLLEFKSREHFLISRLL RVMADHDSLTGLHNRRSFNQHLDRLWRQAQREQKTLALLLCDVDHFKAYNDRYGHQAG DAVLQRIGAVFEANARRPLDMAVRLGGEEFALLLYGANEHEARLRAEALRAQVQALRM EHEASDTAREVTLSVGVSCLWPTPGNDLKRLYDLYEHADRALYEAKAFGRNQVVA" misc_feature complement(<3753769..3754914) /locus_tag="PA3343" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" misc_feature complement(3753775..3754269) /locus_tag="PA3343" /note="Diguanylate cyclase, GGDEF domain; Region: GGDEF; pfam00990" /db_xref="CDD:425976" misc_feature complement(order(3754021..3754023,3754153..3754155)) /locus_tag="PA3343" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(3754018..3754029,3754033..3754035, 3754102..3754104,3754114..3754116,3754126..3754131, 3754138..3754140)) /locus_tag="PA3343" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(3753961..3753963,3754045..3754047)) /locus_tag="PA3343" /note="I-site [active]" /db_xref="CDD:143635" gene complement(3755021..3757159) /gene="recQ" /locus_tag="PA3344" /db_xref="GeneID:882509" CDS complement(3755021..3757159) /gene="recQ" /locus_tag="PA3344" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase RecQ" /protein_id="NP_252034.1" /db_xref="GeneID:882509" /translation="MREQALRILKDVFGYDAFRGNQARIIERVAEGGDALVLMPTGGG KSLCFQVPALLREGLTVVVSPLIALMEDQVATLDELGVPAVALNSTLNPEQQRDIAER LQRGEIKLLYLAPERLVQPRMLAFLQRLPVGLFAIDEAHCVSQWGHDFRPEYLQLGQL AELFPQVPRIALTATADMRTREEMIQRLHLQNAEQFLSSFDRPNIFYRIVPKEQPRKQ LLGFLSERRGDAGIVYCLSRKKVEEVAEFLGNQGFPALPYHAGLSNELRAHHQKRFLN EEGLIMVATIAFGMGIDKPNVRFVAHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGL QDVLLLRQMMQSSEGDERHKRVERHKLEAMLALCEETRCRRQALLAYFDEEMPQPCGH CDNCVDGVETWDATESARQALSAIYRSGQRYGVGHLVDILLGRETEKIRSLGHQHLAV FGIGKGRGEDEWRTLFRQLVARGLADVDLDGFGGLRLTEACRPLLRGEVRLELRRDLK PQRAKGSSSGGASAASQLVRSEEREMWEALRALRRKLAEEHSVPPYVIFPDATLLEML RSQPRSLSDMAQVSGVGARKLERYGQAFLDVLTDSPAAPAAPPQDLRHELASLACAGM TPAQIARQLNCSEKNVYAMLAEAIAGQQVSLEQALDLPEELLGEIQDAFLEEDGELPP VAALEERFGKRVPSGVLHCVRAALQVELES" misc_feature complement(3755711..3757159) /gene="recQ" /locus_tag="PA3344" /note="Superfamily II DNA helicase RecQ [Replication, recombination and repair]; Region: RecQ; COG0514" /db_xref="CDD:440280" misc_feature complement(3755366..3755569) /gene="recQ" /locus_tag="PA3344" /note="HRDC domain; Region: HRDC; pfam00570" /db_xref="CDD:425755" misc_feature complement(3755051..3755293) /gene="recQ" /locus_tag="PA3344" /note="Helix-turn-helix domain; Region: HTH_40; pfam14493" /db_xref="CDD:464189" gene complement(3757243..3757593) /locus_tag="PA3345" /db_xref="GeneID:882510" CDS complement(3757243..3757593) /locus_tag="PA3345" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252035.1" /db_xref="GeneID:882510" /translation="MSAPHLDDRVLASLQEVMEDEYPVLLDTFVLDSEERLRSLHAAL QAGDAQALRHTAHSFKGGSSNMGAVLLAGYCKELEESARRGELQRAPALIEQMEREFA IVRILFKQERQRYR" misc_feature complement(3757279..3757521) /locus_tag="PA3345" /note="Hpt domain; Region: Hpt; pfam01627" /db_xref="CDD:426352" misc_feature complement(order(3757357..3757359,3757366..3757368, 3757411..3757416,3757423..3757425)) /locus_tag="PA3345" /note="putative binding surface [active]" /db_xref="CDD:238041" misc_feature complement(3757423..3757425) /locus_tag="PA3345" /note="active site" /db_xref="CDD:238041" gene complement(3757659..3759374) /locus_tag="PA3346" /db_xref="GeneID:882513" CDS complement(3757659..3759374) /locus_tag="PA3346" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_252036.1" /db_xref="GeneID:882513" /translation="MNPPAARIESLTILIAEDNAADRLLLSTIVSRQGHRVLTAGNGL EAVALFETERPQLVLMDVMMPVMDGFEAARRIKQQAGEELVPIIFLTSLSETEALVQS LEAGGDDFLSKPYNRVILEAKINAMGRLHLLQRTVLEQRDLIVRHNEHLLNEQRVAKA VFDKVAHSGCLNASNVRYLQSPLALFNGDLLLAAYKPSGGMHVLLGDFTGHGLPAAIG AMPLAEVFYGMTAKGYPMADILREMNAKLKRILPVGVFCCATLLNLSFQRELVEVWNG GLPDGYLLRAASGERVALVSRHLPLGILEPAAFSDRCETYPLDIEDRIFLFSDGVLEA SNKAGEMFGEARLLQLFERNRQPSALFDEIQRSLAQFRGAVQDDVSMLEVRLQPDSGL QCPPLAFSDSGVSSPLDWSVSFEFRAETLKHFNPLPHVLQLLLEVHDLRARGGALYTV LAELYSNALEHGVIGLDSTMKSDAAGFARYYQERVSRLQALRDGYVRLHLDLAPHGAG GRLLVRVEDSGEGFDVERALNAVERQERLCGRGLRLIRELSDRCQWSADGKVVSVEFF WSPQA" misc_feature complement(3759030..3759341) /locus_tag="PA3346" /note="phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs); Region: REC; cl19078" /db_xref="CDD:473134" misc_feature complement(order(3759039..3759041,3759045..3759056)) /locus_tag="PA3346" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:381085" misc_feature complement(3758214..3758786) /locus_tag="PA3346" /note="Stage II sporulation protein E (SpoIIE); Region: SpoIIE; pfam07228" /db_xref="CDD:462119" misc_feature complement(3757680..3758027) /locus_tag="PA3346" /note="Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains; Region: HATPase_RsbW-like; cd16936" /db_xref="CDD:340413" misc_feature complement(order(3757692..3757694,3757698..3757703, 3757707..3757709,3757713..3757715,3757749..3757760, 3757809..3757814,3757818..3757820,3757824..3757826, 3757830..3757832,3757995..3757997,3758004..3758006, 3758016..3758018)) /locus_tag="PA3346" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:340413" misc_feature complement(order(3757749..3757751,3757788..3757790)) /locus_tag="PA3346" /note="ATP-lid; other site" /db_xref="CDD:340413" gene complement(3759376..3759681) /locus_tag="PA3347" /db_xref="GeneID:882514" CDS complement(3759376..3759681) /locus_tag="PA3347" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252037.1" /db_xref="GeneID:882514" /translation="MAITALPSADGQELTIQIQGRFDFGAHQDFRDAYERVAITPRRY VVDLRNATYLDSSALGMLLLLRDHAGGENAQISLANCSPEVRKILAISNFEQLFKIS" misc_feature complement(3759382..3759654) /locus_tag="PA3347" /note="Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation; Region: STAS_anti-anti-sigma_factors; cd07043" /db_xref="CDD:132914" misc_feature complement(order(3759400..3759402,3759406..3759411, 3759421..3759423,3759487..3759492,3759499..3759507, 3759511..3759519,3759523..3759525,3759589..3759591, 3759607..3759615,3759619..3759621)) /locus_tag="PA3347" /note="anti sigma factor interaction site [active]" /db_xref="CDD:132914" misc_feature complement(3759514..3759516) /locus_tag="PA3347" /note="regulatory phosphorylation site [posttranslational modification]; other site" /db_xref="CDD:132914" gene complement(3759996..3760820) /locus_tag="PA3348" /db_xref="GeneID:882515" CDS complement(3759996..3760820) /locus_tag="PA3348" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis protein methyltransferase" /protein_id="NP_252038.1" /db_xref="GeneID:882515" /translation="MSAANADFELFRVFLEKTCGIVLGSNKQYLVSSRLNKLMEQQGI KSLGELVQRIQTQRGGLREMVVDAMTTNETLWFRDTYPFEVLKQRVLPELIKANGGQR LRIWSAACSSGQEPYSLSMAIDEFEKTNLGQLKAGVQIVATDLSGSMLTAAKAGEYDT LAMGRGLSPERLQRYFDAKGPGRWAVKPAIRSRVEFRALNLLDSYASLGKFDMVFCRN VLIYFSAEVKRDILLRIHGTLKPGGYLFLGASEALNNLPDHYQMVQCSPGIIYRAK" misc_feature complement(3759999..3760805) /locus_tag="PA3348" /note="Methylase of chemotaxis methyl-accepting proteins [Signal transduction mechanisms]; Region: CheR; COG1352" /db_xref="CDD:440963" gene complement(3760897..3761829) /locus_tag="PA3349" /db_xref="GeneID:882516" CDS complement(3760897..3761829) /locus_tag="PA3349" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis protein" /protein_id="NP_252039.1" /db_xref="GeneID:882516" /translation="MAGVLDSVNQRTQLVGQNRLELLLFRLDGNQLYGINVFKVKEVL QCPRLTVMPKSSPVVRGVANIRGGTIPILDLALATGRRGLQDLTNSFAIITEYNTKVQ GFLVRSVERIVNMNWEEIHPPPKGAGREHYLTAVTRVDKQLVEIIDVEKVLAEVAPTS EEVSHGVVDAETQSRAVTKRVLVVDDSSVARKQVIRCLEAVGVEMTALNDGRQALEYL QNMLSEGRRPEDELLMLISDIEMPEMDGYTLTAEIRSDPRLQKLHILLHTSLSGVFNQ AMVKKVGADDFLAKFRPDDLAARVVERIKAVDAG" misc_feature complement(3761365..3761787) /locus_tag="PA3349" /note="Chemotaxis signal transduction protein CheW [Signal transduction mechanisms]; Region: CheW; COG0835" /db_xref="CDD:440597" misc_feature complement(3760957..3761289) /locus_tag="PA3349" /note="phosphoacceptor receiver (REC) domain of chemotaxis protein CheV and similar proteins; Region: REC_CheV-like; cd19924" /db_xref="CDD:381151" gene 3761961..3762659 /locus_tag="PA3350" /db_xref="GeneID:882517" CDS 3761961..3762659 /locus_tag="PA3350" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="flagellar basal body P-ring biosynthesis protein FlgA" /protein_id="NP_252040.1" /db_xref="GeneID:882517" /translation="MLGLGYLCAANNSQAQGFTAPEVLIGSTQGFLEFKVEEYLQNSG LDGRYQIQVNRVDPRLRLAECDRDLTLSQESPAQPIGRVTVRISCEGSAPWTIFMPAQ VKLFRQVVVAVQPLKRAHVLEDADIALVERDVGLLTQGYLTDPARVVGQKLRRPVVND QVLAPVFLEQAEAVRKGDQVVILARTATINVKMPGEALSDGAPGQQIRVRNLRSQRII KARVIEPGTVEVNM" misc_feature 3761961..3762656 /locus_tag="PA3350" /note="flagellar basal body P-ring formation protein FlgA; Region: flgA; PRK07018" /db_xref="CDD:180794" gene 3762804..3763127 /gene="flgM" /locus_tag="PA3351" /db_xref="GeneID:882518" CDS 3762804..3763127 /gene="flgM" /locus_tag="PA3351" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein FlgM" /protein_id="NP_252041.1" /db_xref="GeneID:882518" /translation="MVIDFNRLNPGSTPATTGRTGSTAAGRPDATGADKAGQAATSAP KSGESVQISETAQNMQKVTDQLQTLPVVDNDKVARIKQAIADGTYQVDSERVASKLLD FESQR" misc_feature 3762816..3763115 /gene="flgM" /locus_tag="PA3351" /note="flagellar biosynthesis anti-sigma factor FlgM; Region: FlgM_jcvi; TIGR03824" /db_xref="CDD:274802" gene 3763182..3763652 /locus_tag="PA3352" /db_xref="GeneID:882519" CDS 3763182..3763652 /locus_tag="PA3352" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252042.1" /db_xref="GeneID:882519" /translation="MPDSPTLLDLFAEDIGHANQLLQLVDEEFQALERRELPVLQQLL GAKQPLMQQLERNGRARAEILREAGVSLDREGLARYARERADGAELLARGDELGELLE RCQQANLRNGRIIRANQASTGSLLNILRGQDAPSLYDSRGGTASSSRQRPLSQA" misc_feature 3763188..3763649 /locus_tag="PA3352" /note="Flagellar biosynthesis/type III secretory pathway chaperone FlgN [Cell motility, Intracellular trafficking, secretion, and vesicular transport]; Region: FlgN; COG3418" /db_xref="CDD:442644" protein_bind 3763677..3763689 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3353" /bound_moiety="AmrZ" gene 3763681..3764472 /locus_tag="PA3353" /db_xref="GeneID:882520" CDS 3763681..3764472 /locus_tag="PA3353" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252043.1" /db_xref="GeneID:882520" /translation="MLSLRHSCPRRALKVPNPFVEEAGPQPPKVLKAPVEIQANLRLL QDSRDSLLITFADRNQRFQSFLVDIDRDRGMVALDELIPNTGERFLQNGEAFRVEAFH EGVRIAWECERPVQFGEHDGVPCYWAALPAEVLYHQRRNAYRASIKQSQPIAAEIAGE KLRAPLSGQLLDISATGAKLRFAGNVAERLHPGEIYEDFSAQLPQGAISSAIELRHVR FDEKLDATFAGVRFSEMSGLAQRQVDRFVYQLQREARRFEKDELF" misc_feature 3763831..3764448 /locus_tag="PA3353" /note="Cyclic di-GMP-binding flagellar brake protein FlgZ/YcgR, contains PilZNR(YcgR) and PilZ domains [Cell motility]; Region: YcgR; COG5581" /db_xref="CDD:444320" gene complement(3764476..3765087) /locus_tag="PA3354" /db_xref="GeneID:882521" CDS complement(3764476..3765087) /locus_tag="PA3354" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252044.1" /db_xref="GeneID:882521" /translation="MSPTLSLHLMVRNLPPGQRRPKIAQAIGEESAGRLQRVLLERAL RLPDRGFSARILWFDDDLDSDLQALAVALGWSLMSQPAGDPGERMRRIAALGLAESEA VLLIRHDCPVLDGDYLEAACTALGRHQAVLGPVERGGYALLGLTRVDPLLFESMPWGG DRLLALTCERLRQLGWEHHLLPALWDVDRPEDLPRLAALGLVL" misc_feature complement(3764491..3765087) /locus_tag="PA3354" /note="Uncharacterized conserved protein, glycosyltransferase A (GT-A) superfamily, DUF2064 family [Function unknown]; Region: COG3222" /db_xref="CDD:442455" gene complement(3765129..3766433) /locus_tag="PA3355" /db_xref="GeneID:882522" CDS complement(3765129..3766433) /locus_tag="PA3355" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252045.1" /db_xref="GeneID:882522" /translation="MRRIFFSFRALYFATLLMLTGSGLLSTYLALRLAADKVDGLWVG ALMAANYFGLVLGGKVGHRLIARVGHIRAYVACAGVVTAAVLGHGLLPWLPAWIALRM VMGLGLMCQYMVIESWLNEQADASQRGAVFGGYMAASYLGLVLGQMILVAHPQLGPEL LMLVAFCFALCLVPLALTHKIHPAALRPAPLEPRFFIRRVPQSLTTVLVSGLVVGSFY GLAPLYANQLGLPNEQVGLYMGACIFAGLLVQWPLGWLSDRRDRAWLIRACAILLCLF ALPLALLQQMPLALLLALGIAASMLQFTLYPLAVAFSNDHVETERRVSLTAMLLVTFG VGACIGPLAAGALMRLFGANMLYAFVSACALILVWRVHPEKVSGLHRVDDAPLHHVPT PDNMTSSPLVAALDPRVDEQAVQEQMVDGEPDAPQADGATQN" misc_feature complement(3765330..3766403) /locus_tag="PA3355" /note="YcaD and similar transporters of the Major Facilitator Superfamily; Region: MFS_YcaD_like; cd17477" /db_xref="CDD:341030" misc_feature complement(order(3765423..3765425,3765432..3765437, 3765444..3765449,3765456..3765458,3765504..3765506, 3765516..3765518,3765528..3765533,3765684..3765686, 3765696..3765698,3765768..3765770,3765777..3765785, 3765792..3765797,3765804..3765806,3766005..3766007, 3766014..3766019,3766026..3766028,3766086..3766088, 3766095..3766103,3766107..3766112,3766260..3766262, 3766356..3766358,3766365..3766370,3766377..3766382)) /locus_tag="PA3355" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341030" gene complement(3766617..3767858) /locus_tag="PA3356" /db_xref="GeneID:882523" CDS complement(3766617..3767858) /locus_tag="PA3356" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252046.1" /db_xref="GeneID:882523" /translation="MTGEGFLSGRRLQLARGVLLQCIMGGYPPARFYGSDDGDLALVA EPTQVHRLPWSNTPRAFAICDAQELDGTPSGLSTRGLLKQVVARYAAHGLQPVVATEL EFFVFAPNTDPNEPFQAPLGPDGRRELGYSAFSVSSNNGLRPFFEDVYRCMDALGLVR DTFMHEMGTSQFEINFLHGDPVLLADQTFLFKHLLKEVALKHGLIVVCMAKPLAKTPG SSMHIHQSIVELDGGRNIFSEADGEPSAAFRHFIGGQQACLADFTPFFAPHVNSFQRL CHPYASPNNACWSHDNRAAGLRIPASGASARRVENRLPGADANPYLAITASLAAGLYG LEHELEPSPAIQGEFEVPEELTLPCTMYDALRRLKGSALARELFGSEFVEGYVATKSM ELTSFFDEISPWERRVLAAQA" misc_feature complement(3766638..3767783) /locus_tag="PA3356" /note="Glutamine synthetase [Amino acid transport and metabolism]; Region: GlnA; COG0174" /db_xref="CDD:439944" gene 3768184..3769530 /gene="dsdA" /locus_tag="PA3357" /db_xref="GeneID:882524" CDS 3768184..3769530 /gene="dsdA" /locus_tag="PA3357" /EC_number="4.3.1.18" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="D-serine dehydratase" /protein_id="NP_252047.1" /db_xref="GeneID:882524" /translation="MILGTPKADWLAEFPRLADLIALRPSEWFNPAIAPSAEALADVG LGAADVADASARLQRFAPLIARLFPETAASGGIIESDLVEVATFHDALRQHYAAELPG RLWLKRDSHLPISGSIKARGGIYEVLAHAERLALEHGLVGLDDDYSRLAEADCRAFFA RHRIAVGSTGNLGLSIGIIGAALGFQASVHMSADARQWKKDKLRAHGVTVVEYASDYS VAVEQGRREAAGDPYTHFVDDENSRDLFLGYAVAAERLRGQLDAAGIRVDSEHPLFVH LPCGVGGGPGGVAFGLKLAFGDAVHCLFAEPTHSPCMFLGVYTGRHEQVSVQDFGIDN RTAADGLAVGRPSGFVGRAMQRLLDGYYTVDDDELFRLLALLERSQGIRLEPSALAGA TGIARVTREPQGYRERMGLTSARLANATHLVWATGGGMVPETEMRAYLERGRSLLD" misc_feature 3768187..3769524 /gene="dsdA" /locus_tag="PA3357" /note="D-serine dehydratase [Amino acid transport and metabolism]; Region: DsdA; COG3048" /db_xref="CDD:442282" gene 3769587..3770465 /locus_tag="PA3358" /db_xref="GeneID:882525" CDS 3769587..3770465 /locus_tag="PA3358" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252048.1" /db_xref="GeneID:882525" /translation="MRTPAWLGSGMPLLFVLLWSTGFLGAKFGLPYAEPFTFLAIRLL LAAALLAAFALLSGAPWPGSARLAGHVAVAGLLVHGLYLGGVFLAIEHGMSAGLTSLL VGLQPLATAALAGIWLGEQVSRRQWLGLALGLAGVALVVLGRIHGGADGLAWAAVLVA LAAITCGTLYQKRFCGGMDLRTGGVVQYLASGALLGLAALLFESREVQWSTPFVLTLG WLVLGLSFGAVGLLYTLIRHGAASKVASLFYLVPPVTALASWLLFDERLAPAAIGGML LVMLGVALVNWPGRRA" misc_feature 3769602..3770459 /locus_tag="PA3358" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene complement(3770470..3771480) /locus_tag="PA3359" /db_xref="GeneID:882526" CDS complement(3770470..3771480) /locus_tag="PA3359" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252049.1" /db_xref="GeneID:882526" /translation="MSANDLRQCLRIAGGGTLGFFVCKLMNWDYGSFFGVYPMLLLGL TPVINLHIVRQFLANSVVISVEVLVLYGLFGDRPLLMTPIVFGLFVYRFALMARGPLF FFGALSSVFLSMLLHFASYPDVDLFDMLASNMVATWLTVAIAVLMFYLFPDVEPRSPR QAPAKDAPSRRHETLLGATVATLSFVVFQTFDLKDSLSAQIASILVLFPMHWKGVHFA GRIRALGTLLGCALAVGLQVLLYDHYDILPFVALLLWISAMFCARIHMLENGVPGIGF GALTTLAIVLGQYLTPTHDMMYSVLYRFTSVCFAVLITLMTVLVIHLFLNRFAATRHY SH" misc_feature complement(3771040..3771459) /locus_tag="PA3359" /note="Protein of unknown function (DUF2955); Region: DUF2955; pfam11168" /db_xref="CDD:431697" gene complement(3771503..3772561) /locus_tag="PA3360" /db_xref="GeneID:882527" CDS complement(3771503..3772561) /locus_tag="PA3360" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="secretion protein" /protein_id="NP_252050.1" /db_xref="GeneID:882527" /translation="MTPDQRFARWVQVAIAVFVLLFVYFLVADLWMPLTPQAQLTRPV VRVAPRVSGQVAEVLVSNNGHVQPGEVLFRLDPEPFRLAVRQAELALEEAERTNRELD AAIASAKADLLAARSSAGELDSEARRTAQLVQRHHVSQQMHEQVSAQAQAARARVAAA QARIGELTARRGTAGEDNLRLRQARNALAQARLQLQYSSVRADRAGTLSNLQLTPGTY VPAGTPVAALVDDRIDIVADFREKSLRYVRPGDRAAVVFDARPGEVFGARVAAIDAGV KEGQLDANGDLAAPVTSDRWVRDAQRQRLHVVLDELPEGLLPTGAKATVQLYPGDGLS HLLGRAQIVAISLLHYVY" misc_feature complement(3771572..3772546) /locus_tag="PA3360" /note="Multidrug resistance efflux pump EmrA [Defense mechanisms]; Region: EmrA; COG1566" /db_xref="CDD:441174" gene 3773029..3773376 /gene="lecB" /locus_tag="PA3361" /db_xref="GeneID:882528" CDS 3773029..3773376 /gene="lecB" /locus_tag="PA3361" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="fucose-binding lectin PA-IIL" /protein_id="NP_252051.1" /db_xref="GeneID:882528" /translation="MATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQ STNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDND YNDAVVVINWPLG" misc_feature 3773047..3773370 /gene="lecB" /locus_tag="PA3361" /note="Fucose-binding lectin II (PA-IIL); Region: PA-IIL; pfam07472" /db_xref="CDD:429479" gene complement(3773430..3773948) /locus_tag="PA3362" /db_xref="GeneID:880572" CDS complement(3773430..3773948) /locus_tag="PA3362" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="transporter protein AmiS" /protein_id="NP_252052.1" /db_xref="GeneID:880572" /translation="MMLGLVLLYVGAVLFLNAVWLLGKISGREVAVINFLVGVLSACV AFYLIFSAAAGQGSLKAGALTLLFAFTYLWVAANQFLEVDGKGLGWFCLFVSLTACTV AIESFAGASGPFGLWNAVNWTVWALLWFCFFLLLGLSRSIQKPVAYLTLASAIFTAWL PGLLLLGQVLKA" misc_feature complement(3773439..3773939) /locus_tag="PA3362" /note="UreI/Amis family, subgroup 1. Putative proton-gated urea channel and putative amide transporters; Region: UreI_AmiS_like_1; cd13747" /db_xref="CDD:259834" misc_feature complement(order(3773451..3773453,3773460..3773462, 3773646..3773648,3773655..3773660,3773667..3773669, 3773676..3773681,3773688..3773693,3773697..3773699, 3773727..3773732,3773739..3773741,3773748..3773753, 3773760..3773765,3773769..3773774,3773802..3773804, 3773808..3773810,3773841..3773843,3773850..3773855, 3773862..3773867,3773871..3773876,3773889..3773894, 3773913..3773915,3773922..3773927,3773934..3773936)) /locus_tag="PA3362" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:259834" misc_feature complement(order(3773574..3773576,3773745..3773747, 3773928..3773930)) /locus_tag="PA3362" /note="constriction site 1 [chemical binding]; other site" /db_xref="CDD:259834" misc_feature complement(order(3773562..3773567,3773733..3773738, 3773907..3773909)) /locus_tag="PA3362" /note="constriction site 2 [chemical binding]; other site" /db_xref="CDD:259834" gene complement(3773991..3774581) /gene="amiR" /locus_tag="PA3363" /db_xref="GeneID:880573" CDS complement(3773991..3774581) /gene="amiR" /locus_tag="PA3363" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="aliphatic amidase regulator" /protein_id="NP_252053.1" /db_xref="GeneID:880573" /translation="MSANSLLGSLRELQVLVLNPPGEVSDALVLQLIRIGCSVRQCWP PPESFDVPVDVVFTSIFQNRHHDEIAALLAAGTPRTTLVALVEYESPAVLSQIIELEC HGVITQPLDAHRVLPVLVSARRISEEMAKLKQKTEQLQERIAGQARINQAKALLMQRH GWDEREAHQYLSREAMKRREPILKIAQELLGNEPSA" misc_feature complement(3774012..3774551) /gene="amiR" /locus_tag="PA3363" /note="Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains [Signal transduction mechanisms, Transcription]; Region: AmiR; COG3707" /db_xref="CDD:442921" gene complement(3774578..3775735) /gene="amiC" /locus_tag="PA3364" /db_xref="GeneID:877798" CDS complement(3774578..3775735) /gene="amiC" /locus_tag="PA3364" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="aliphatic amidase expression-regulating protein" /protein_id="NP_252054.1" /db_xref="GeneID:877798" /translation="MGSHQERPLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGV GGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSHTRKAVMPVVERADALL CYPTPYEGFEYSPNIVYGGPAPNQNSAPLAAYLIRHYGERVVFIGSDYIYPRESNHVM RHLYRQHGGTVLEEIYIPLYPSDDDVQRAVERIYQARADVVFSTVVGTGTAELYRAIA RRYGDGRRPPIASLTTSEAEVAKMESDVAEGQVVVAPYFSSIDTAASRAFVQACHGFF PENATITAWAEAAYWQTLLLGRAAQAAGSWRVEDVQRHLYDICIDAPQGPVRVERQNN HSRLSSRIAEIDARGVFQVRWQSPEPIRPDPYVVVHNLDDWSASMGGGALP" misc_feature complement(3774638..3775708) /gene="amiC" /locus_tag="PA3364" /note="periplasmic binding domain of amidase (AmiC) that belongs to the type 1 periplasmic binding fold protein family; Region: PBP1_AmiC; cd06357" /db_xref="CDD:380580" misc_feature complement(order(3775037..3775039,3775280..3775282, 3775286..3775288,3775412..3775417,3775424..3775426, 3775481..3775489)) /gene="amiC" /locus_tag="PA3364" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:380580" misc_feature complement(order(3774638..3774640,3774644..3774646, 3775271..3775273,3775283..3775285,3775397..3775399, 3775403..3775405,3775448..3775450,3775460..3775462, 3775469..3775471,3775478..3775480)) /gene="amiC" /locus_tag="PA3364" /note="regulator interaction site [polypeptide binding]; other site" /db_xref="CDD:380580" gene complement(3775761..3776876) /locus_tag="PA3365" /db_xref="GeneID:877799" CDS complement(3775761..3776876) /locus_tag="PA3365" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chaperone" /protein_id="NP_252055.1" /db_xref="GeneID:877799" /translation="MPFLSDMLDQSRRQQDEEQALARENLAEASLLQAHLSHRSALRS RFRFDPAAVMDCLRAEVLGQDPALQAVEDMLKVVRADIADPRRPLFSALFLGPTGVGK TEIVRALARALHGDAEGFCRVDMNTLSQEHYAAALTGAPPGYVGAKEGTTLLEQDKLD GSPGRPGIVLFDELEKASPEVVHALLNVLDNGLLRVASGERTYHFRNTLVFMTSNLCA HEIQRYDERRQRLPWRLLPVGGERRRRDIDGMVRARLLKTFSPEFVNRLDSVVTFNWI ERDVVARLVELEVQRLNRRLEKHRCRLEATPEVLAKIARAGFDRQFGARALRRSVRHH LEVPLAEHLLDHHQPGDGNCTTYLASLEHERVRFVRR" misc_feature complement(<3776568..>3776867) /locus_tag="PA3365" /note="Flagellar biosynthesis GTPase FlhF [Cell motility]; Region: FlhF; COG1419" /db_xref="CDD:441029" misc_feature complement(3775824..>3776708) /locus_tag="PA3365" /note="ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]; Region: ClpA; COG0542" /db_xref="CDD:440308" gene complement(3776959..3777999) /gene="amiE" /locus_tag="PA3366" /db_xref="GeneID:877816" CDS complement(3776959..3777999) /gene="amiE" /locus_tag="PA3366" /EC_number="3.5.1.4" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="acylamide amidohydrolase" /protein_id="NP_252056.1" /db_xref="GeneID:877816" /translation="MRHGDISSSNDTVGVAVVNYKMPRLHTAAEVLDNARKIAEMIVG MKQGLPGMDLVVFPEYSLQGIMYDPAEMMETAVAIPGEETEIFSRACRKANVWGVFSL TGERHEEHPRKAPYNTLVLIDNNGEIVQKYRKIIPWCPIEGWYPGGQTYVSEGPKGMK ISLIICDDGNYPEIWRDCAMKGAELIVRCQGYMYPAKDQQVMMAKAMAWANNCYVAVA NAAGFDGVYSYFGHSAIIGFDGRTLGECGEEEMGIQYAQLSLSQIRDARANDQSQNHL FKILHRGYSGLQASGDGDRGLAECPFEFYRTWVTDAEKARENVERLTRSTTGVAQCPV GRLPYEGLEKEA" misc_feature complement(3776968..3777999) /gene="amiE" /locus_tag="PA3366" /note="aliphatic amidase; Region: amiE; PRK13286" /db_xref="CDD:237335" misc_feature complement(order(3777073..3777102,3777106..3777108, 3777142..3777180,3777184..3777189,3777193..3777201, 3777214..3777216,3777235..3777255,3777259..3777261, 3777268..3777270,3777283..3777285,3777313..3777315, 3777370..3777375,3777382..3777387,3777391..3777396, 3777403..3777405,3777412..3777417,3777460..3777465, 3777469..3777474,3777478..3777492,3777499..3777501, 3777559..3777597,3777658..3777660,3777850..3777858)) /gene="amiE" /locus_tag="PA3366" /note="multimer interface [polypeptide binding]; other site" /db_xref="CDD:143589" misc_feature complement(order(3777424..3777426,3777499..3777504, 3777574..3777576,3777586..3777588,3777598..3777600, 3777823..3777825)) /gene="amiE" /locus_tag="PA3366" /note="active site" /db_xref="CDD:143589" misc_feature complement(order(3777502..3777504,3777598..3777600, 3777823..3777825)) /gene="amiE" /locus_tag="PA3366" /note="catalytic triad [active]" /db_xref="CDD:143589" misc_feature complement(order(3777073..3777102,3777106..3777108, 3777142..3777180,3777184..3777189,3777193..3777201, 3777283..3777285,3777370..3777375,3777382..3777387, 3777391..3777396,3777403..3777405,3777412..3777414, 3777460..3777465,3777469..3777474,3777478..3777492, 3777499..3777501,3777559..3777597,3777658..3777660)) /gene="amiE" /locus_tag="PA3366" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143589" gene complement(3778034..3778133) /gene="amiL" /locus_tag="PA3366.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /db_xref="GeneID:9793395" ncRNA complement(3778034..3778133) /ncRNA_class="other" /gene="amiL" /locus_tag="PA3366.1" /product="AmiL" /note="Not available" /db_xref="GeneID:9793395" gene 3778266..3778604 /locus_tag="PA3367" /db_xref="GeneID:877817" CDS 3778266..3778604 /locus_tag="PA3367" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252057.1" /db_xref="GeneID:877817" /translation="MKFGLFASIALFLLSVCALPALAANSPCSGKKGGIAGCDGDIFL CNDGSISASKRSCAAYFGNAGGRTGQPAVQRLQGTTQGCACGSGSFCTGPRGGVYCLT PGGKKSYRRK" misc_feature 3778287..3778442 /locus_tag="PA3367" /note="hypothetical protein; Provisional; Region: PRK10040" /db_xref="CDD:182205" gene complement(3778654..3778730) /locus_tag="PA3368.1" /db_xref="GeneID:3240241" tRNA complement(3778654..3778730) /locus_tag="PA3368.1" /product="tRNA-Arg" /db_xref="GeneID:3240241" gene 3778704..3779369 /locus_tag="PA3368" /db_xref="GeneID:878154" CDS 3778704..3779369 /locus_tag="PA3368" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_252058.1" /db_xref="GeneID:878154" /translation="MLYPIELPGHAGHGERCAASGRHVNGRESVCHATATKAAHNFPQ PWRCSMNQTVAIPAAQDLPDAPRQPRIPDSPFASFDVRIASEHDAPRLSLLLQQLGSA DPRPDPALLAIQLQRPRGDRVTLVAERGERLLGTCTLHLIEHLAHDFARSAILEDMVV DRHARGQGVGRELIGRAVERARSWGCYKLALSSHQDRETAQRFYAALGFTSHGVSLAL HLG" misc_feature 3779013..3779330 /locus_tag="PA3368" /note="Acetyltransferase (GNAT) family; Region: Acetyltransf_1; pfam00583" /db_xref="CDD:395465" misc_feature order(3779175..3779183,3779211..3779216) /locus_tag="PA3368" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene 3779562..3779840 /locus_tag="PA3369" /db_xref="GeneID:878448" CDS 3779562..3779840 /locus_tag="PA3369" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252059.1" /db_xref="GeneID:878448" /translation="MSSSRNLVGTGLLSLLALVVFQNSALGDEDRTQERNGERPVVLD SNATPQWAPAAQQLVIQAPDESPRIVTVGEDERGTALVTAADEQAWTF" gene 3779930..3780076 /locus_tag="PA3370" /db_xref="GeneID:878449" CDS 3779930..3780076 /locus_tag="PA3370" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252060.1" /db_xref="GeneID:878449" /translation="MWILALPLTALALSVGVYGLLWLIERGGDEYPAKLPLSDKGATE PRRH" gene 3780128..3780313 /locus_tag="PA3371" /db_xref="GeneID:879550" CDS 3780128..3780313 /locus_tag="PA3371" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252061.1" /db_xref="GeneID:879550" /translation="MSRSAVILLFVVIASAILALSLPPEATLLAWCAWGLLGISGAWL LFALVVGRRIRFDPSLD" gene complement(3780362..3781132) /locus_tag="PA3372" /db_xref="GeneID:879551" CDS complement(3780362..3781132) /locus_tag="PA3372" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="carbon-phosphorus lyase complex accessory protein" /protein_id="NP_252062.1" /db_xref="GeneID:879551" /translation="MRLTLLGTGDARQVPVYGCDCPACRNARADAGLRRRPCSALLEC AGQRWLIDSGLVDLCERFPPHSLDGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADP EGLADLYKHPGILDFSQPFGAFERRQWGALAATALPLVHSKPTFGYLLEGASEEGTIR RLAYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIESLRP RRAVLTHVGHAVDAWLLDHPAALPEGVELAHDGMCLPL" misc_feature complement(3780371..3781102) /locus_tag="PA3372" /note="mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain; Region: metallo-hydrolase-like_MBL-fold; cl23716" /db_xref="CDD:451500" misc_feature complement(order(3780632..3780634,3780710..3780712, 3780896..3780901,3780905..3780907,3780911..3780913)) /locus_tag="PA3372" /note="active site" /db_xref="CDD:293822" gene complement(3781123..3781680) /locus_tag="PA3373" /db_xref="GeneID:877998" CDS complement(3781123..3781680) /locus_tag="PA3373" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252063.1" /db_xref="GeneID:877998" /translation="MTGRLIYLMGPSGSGKDSLLQAAREPLALRGCRIVRRVITRSAE AVGEDAQAVTPAQFDTLERASAFAMSWRANGLCYGIPVQIDEWLAQGYDVLVNGSRGY LAQARRRYPDLLAVLLGVKPEVLRQRLLARGRESPEEIEARLARNAEFAAGLEGPLFQ LDNSGDLDDTLRSLLARLGSDRACA" misc_feature complement(3781126..3781677) /locus_tag="PA3373" /note="Ribose 1,5-bisphosphate kinase PhnN [Carbohydrate transport and metabolism]; Region: PhnN; COG3709" /db_xref="CDD:442923" gene complement(3781680..3782843) /locus_tag="PA3374" /db_xref="GeneID:877999" CDS complement(3781680..3782843) /locus_tag="PA3374" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252064.1" /db_xref="GeneID:877999" /translation="MSSERVLSNARVVSAERVFVGSVLLRDGLIAAVDEGRSHLAGAE DLGGDYLLPGLVELHTDNLEKHMTPRPGVDWPSASAVLAHDAQIVSAGITTVFDALSI GDVNPKGKRMQQLPKMLEAIGEAAASGDARADHRLHLRCEVSHPQTLEVFRELVEHPL VQLVSVMDHAPGQRQFARLEKYREYYQGKYHLSDAEMDAFIVEQVANSERYSDAARAA IVDVCQGRGLSVASHDDATLAHVRESAGYGMAIAEFPTTVEAARASHEHGLQVLMGAP NVVRGGSHSGNVAAAQLAGIGVLDILSSDYYPASLLHAALLLAGEHSEYDAIRYDLPR AVAMVSRTPALAAGLTDRGEIRVGLRADLLQARALGNNQPVVRQVWRGGQRVF" misc_feature complement(3781683..3782843) /locus_tag="PA3374" /note="Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase PhnM [Inorganic ion transport and metabolism]; Region: PhnM; COG3454" /db_xref="CDD:442677" gene complement(3782833..3783549) /locus_tag="PA3375" /db_xref="GeneID:879947" CDS complement(3782833..3783549) /locus_tag="PA3375" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_252065.1" /db_xref="GeneID:879947" /translation="MNNLIEVRDLSKTFTLHQQQGVVLNVLRGLNFNVAGGECLVLHG RSGAGKSTLLRTLYGNYLPAGGSIRLRHAGDWLELVGAEPREVLAVRRQTLGYVSQFL RVIPRVATLDVVMEPALARGWSRDSAELRARSLLARLNIPERLWQLAPGTFSGGEQQR VNIARGFMVEWPILLLDEPTASLDEANRQVVLELIGEAKAAGAALIGIFHDRAAREAV ASRYLDMSQELSRQEQAHVV" misc_feature complement(3782872..3783549) /locus_tag="PA3375" /note="Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [Inorganic ion transport and metabolism]; Region: PhnL; COG4778" /db_xref="CDD:443809" gene complement(3783599..3784414) /locus_tag="PA3376" /db_xref="GeneID:879948" CDS complement(3783599..3784414) /locus_tag="PA3376" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phosphonate C-P lyase system protein PhnK" /protein_id="NP_252066.1" /db_xref="GeneID:879948" /translation="MNAVCESIDASLDARDRPLLSVRGLTRLYGPEKGCQEVDFDLYP GEVLGIVGESGSGKSTLLSLLSGRCPPDAGTVAYRDDGDRWLDLYAASEAERRTLLRT EWGFVEQNPRDGLRMGVSAGANIGERLMAQGVRHYGRLRQAGLDWLEQVEIDPLRIDD LPRTFSGGMQQRLQIARNLVSAPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELDLAV VIVTHDLAVARLLADRLMVMRRSRVVEAGLTDQILDDPQHPYTQLLVSSVLQP" misc_feature complement(3783602..3784369) /locus_tag="PA3376" /note="phosphonate C-P lyase system protein PhnK; Provisional; Region: phnK; PRK11701" /db_xref="CDD:183280" gene complement(3784411..3785295) /locus_tag="PA3377" /db_xref="GeneID:877807" CDS complement(3784411..3785295) /locus_tag="PA3377" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252067.1" /db_xref="GeneID:877807" /translation="MSLSPQASAAPEQGYNFAYLDEQTKRMIRRGLLKAVAIPGYQVP FGGREMPLPYGWGTGGMQVTAAILGADDVLKVIDQGADDTTNAVSIRRFFARTAGVAT TERTPEATVIQTRHRIPETALSGEQIMVYQVPIPEPLRFIEPSEAETRTMHALDDYGV MHVKLYEDIATFGHIATSYAYPVTVDERYVMDPSPIPKFDNPKLDMNPALMLFGAGRE KRLYAVPPFTRVASLDFEDHPFEVQRWEESCAFCGSHESYLDELIVDDRGGKRFVCSD TDYCTQRRARQEEGEDAQ" misc_feature complement(3784417..3785268) /locus_tag="PA3377" /note="Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase PhnJ [Inorganic ion transport and metabolism]; Region: PhnJ; COG3627" /db_xref="CDD:442845" gene complement(3785292..3786392) /locus_tag="PA3378" /db_xref="GeneID:877808" CDS complement(3785292..3786392) /locus_tag="PA3378" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252068.1" /db_xref="GeneID:877808" /translation="MYVAVKGGEKAIDNAHRLLARKRRGDTALPELSVEQIRQQMPLA VSRVMTEGSLYDEQLAALAIKQAAGDLMEAIFLLRAYRTTLPRFAASLPLDTAGMRLQ RRISATYKDLPGGQLLGPTFDYTHRLLDFSLLAEGDYPGPEVERGASLEPCPRVLGLL DREGLMTPEYELPGAVPDITREPLDFPTGRAQRLQALARGDEGFLLALGYSTQRGYGR NHPFAGEIRIGACEVWLEPEELGFAVPVGEIEVTECEMVNQFVGSREELPQFTRGYGL AFGYAERKAMGMALVDRALRAEEYGEEVVSPAQQEEFVLMHCDNVEAGGFVSHLKLPH YVDFQSELELIRKLRRPGVAESAQPTVQEKRA" misc_feature complement(3785295..3786392) /locus_tag="PA3378" /note="Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [Inorganic ion transport and metabolism]; Region: PhnI; COG3626" /db_xref="CDD:442844" gene complement(3786392..3787021) /locus_tag="PA3379" /db_xref="GeneID:878393" CDS complement(3786392..3787021) /locus_tag="PA3379" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="carbon-phosphorus lyase complex subunit" /protein_id="NP_252069.1" /db_xref="GeneID:878393" /translation="MTSASLPSPADTAALLQPAFQDPVLDAQRSFRAALKALAEPGLV RNLDRAPALAALQPASYALCLSFLDSDTPLWLAPGLDSPTLRANLAFHCGCPIVAERE QALFALLDEGELDDLSGFDSGSDRYPDQSCTLLIQLAGLDGGASLEWRGPGIAEVRQV ALPVSAGFWAQRAARTEFPRGLDAFFAAGERILGLPRSTRVSEPVEEVA" misc_feature complement(3786413..3786985) /locus_tag="PA3379" /note="phosphonate C-P lyase system protein PhnH; Region: phnH; PRK10147" /db_xref="CDD:236655" gene complement(3787021..3787479) /locus_tag="PA3380" /db_xref="GeneID:878394" CDS complement(3787021..3787479) /locus_tag="PA3380" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252070.1" /db_xref="GeneID:878394" /translation="MTALHSDPTIAARQRWMGVLARARREELDAHADALRDADYHLLR AAETGMTLVRGRMGGTGSPFNLGEMTVTRCVVRLGDGRTGYSYVAGRDKRHAELAALA DAHLQGADAAAWQARLIEPLARTQAERRAAQEAEIATTKVEFFTLVRGED" misc_feature complement(3787027..3787464) /locus_tag="PA3380" /note="Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [Inorganic ion transport and metabolism]; Region: PhnG; COG3624" /db_xref="CDD:442842" gene complement(3787489..3788211) /locus_tag="PA3381" /db_xref="GeneID:878142" CDS complement(3787489..3788211) /locus_tag="PA3381" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252071.1" /db_xref="GeneID:878142" /translation="MRPFQTMHLSRQSEPLYRELAERLRQELLAYRPGDYLPGEIQLA QRFAVNRHTLRRALDELVLEGRVLRRQGKGTQVLEAPTIYPMGAANAYTESLSAQGHR VEARLLEARQRPAGAVEATHLGIGEGGRVLELTTLRYLDGQPVSLIRHCYAVSRSELL ADYQGGSLRRYLADKGLPLTRTYSLIGARLPNREEAARLLMPRHAPLLTVLTLSRDRT GQPVELAQSISRADRFQYQVAP" misc_feature complement(3787498..3788175) /locus_tag="PA3381" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: MngR; COG2188" /db_xref="CDD:441791" gene complement(3788232..3789026) /gene="phnE" /locus_tag="PA3382" /db_xref="GeneID:878143" CDS complement(3788232..3789026) /gene="phnE" /locus_tag="PA3382" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphonate transporter PhnE" /protein_id="NP_252072.1" /db_xref="GeneID:878143" /translation="MSTLSTTAAAAATGKPSWGRLVGWGLFLAILAWSWKGAEMNPAV LFRDAGNMATFAADFFPPDFGNWKLYLSEMLVTVQIALWGTVLAIVCAIPLSILASEN IVPWWVYQPVRRVMDACRSINEMVFAMLFVVAVGLGPFAGVLALFISTTGVLAKLFAE AVEAIDPGPVEGVRATGASALQEVIFGVIPQVLPLWISYSLYRFESNVRSATVVGMVG AGGIGVILWEAIRGFQFGQTCAVLIVIIVVVSLIDVLSQRLRKLFI" misc_feature complement(3788235..3788963) /gene="phnE" /locus_tag="PA3382" /note="ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism]; Region: PhnE; COG3639" /db_xref="CDD:442856" gene complement(3789093..3790097) /locus_tag="PA3383" /db_xref="GeneID:880002" CDS complement(3789093..3790097) /locus_tag="PA3383" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphonate ABC transporter substrate-binding protein" /protein_id="NP_252073.1" /db_xref="GeneID:880002" /translation="MLKRFSRVLAASALLAGSLAGMAHADQPVINFGIISTESSQNLK SIWEPFLKDMSQQTGYQVKAFFAPDYAGIIQGMRFDKVDIAWYGNKAAMEAVDRAHGE IFAQTVAASGAPGYWSLLIANKDSKIDSLEDMLANAKSLTFGNGDPNSTSGYLVPGYY VFAKNNVDPVKAFKRTLNSSHEVNALAVANKQVDVATFNTEGMERLELTQPEKARQLK VIWKSPLIPGDPLVWRNNLSDEQKNKLRDFFFKYGANAEQKKVLADLQWSKFQPSDDD QLLPIRQLELFKQRTDVANNANLGAEEKAAKLKALDEELAKLEKRMAEREQKTAANAG " misc_feature complement(3789252..3790025) /locus_tag="PA3383" /note="Substrate binding domain of ABC-type phosphonate uptake system; contains the type 2 periplasmic binding fold; Region: PBP2_PnhD; cd13575" /db_xref="CDD:270293" misc_feature complement(order(3789411..3789413,3789501..3789503, 3789555..3789557,3789642..3789650,3789750..3789752, 3789834..3789836,3789840..3789842,3789888..3789890)) /locus_tag="PA3383" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270293" gene complement(3790150..3790986) /gene="phnC" /locus_tag="PA3384" /db_xref="GeneID:880003" CDS complement(3790150..3790986) /gene="phnC" /locus_tag="PA3384" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphonate ABC transporter ATP-binding protein" /protein_id="NP_252074.1" /db_xref="GeneID:880003" /translation="MSAVIRVDSLNKTFARKQALFNLRLEIQAGEMVALIGASGSGKS TLLRHVAGLARCDRDNGGSIDVLGRRLQASGRLSGEVRRLRADIGYIFQQFNLVNRLS VLDNVLLGFLGRMPRWRGSLGLFSAEQKRQALEALARVGLADFAGQRASTLSGGQQQR VAIARALTQKAEVILADEPIASLDPESARKVMDILADINRHDGKTVVVTLHQVDYALR YCPRAVALKGGRILFDGSSEYLSEGFLNELYGAEGDTPLLFSDRARRGAESQPELTLA RA" misc_feature complement(3790222..3790980) /gene="phnC" /locus_tag="PA3384" /note="ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]; Region: PhnC; COG3638" /db_xref="CDD:442855" protein_bind 3791124..3791137 /experiment="Beta-gal reporter assay [PMID: 15968052]" /experiment="Copper-phenanthroline footprinting [PMID: 15968052]" /experiment="EMSA [PMID: 15968052]" /note="Transcription factor binding site for NP_252075. Originally reported in Pseudomonas aeruginosa FRD1; Evidence of regulation for: PA3385" /bound_moiety="AmrZ" protein_bind complement(3791170..3791185) /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA3385, PA3384'" /bound_moiety="LasR" protein_bind complement(3791184..3791197) /experiment="Beta-gal reporter assay [PMID: 15968052]" /experiment="Copper-phenanthroline footprinting [PMID: 15968052]" /experiment="EMSA [PMID: 15968052]" /note="Transcription factor binding site for NP_252075. Originally reported in Pseudomonas aeruginosa FRD1; Evidence of regulation for: PA3385" /bound_moiety="AmrZ" protein_bind 3791189..3791210 /experiment="Beta-gal reporter assay [PMID: 15968052]" /experiment="Copper-phenanthroline footprinting [PMID: 15968052]" /experiment="EMSA [PMID: 15968052]" /experiment="Fluorescence anisotropy [PMID: 22511872]" /experiment="Site directed mutagenesis [PMID: 22511872]" /experiment="X-ray crystallography [PMID: 22511872]" /note="Transcription factor binding site for NP_252075. Originally reported in Pseudomonas aeruginosa FRD1; Evidence of regulation for: PA3385" /bound_moiety="AmrZ" protein_bind complement(3791190..3791202) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3385" /bound_moiety="AmrZ" protein_bind 3791196..3791208 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3385" /bound_moiety="AmrZ" gene 3791347..3791673 /gene="amrZ" /locus_tag="PA3385" /db_xref="GeneID:878714" CDS 3791347..3791673 /gene="amrZ" /locus_tag="PA3385" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alginate and motility regulator Z" /protein_id="NP_252075.1" /db_xref="GeneID:878714" /translation="MRPLKQATPTYSSRTADKFVVRLPEGMREQIAEVARSHHRSMNS EIIARLEQSLLQEGALQDNLGVRLDSPELSLHERELLQRFRQLTHRQQNALVALIAHD AELAQA" misc_feature 3791383..3791532 /gene="amrZ" /locus_tag="PA3385" /note="Arc-like DNA binding domain; Region: Arc; cl46767" /db_xref="CDD:481107" gene 3791827..3792192 /locus_tag="PA3386" /db_xref="GeneID:878715" CDS 3791827..3792192 /locus_tag="PA3386" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252076.1" /db_xref="GeneID:878715" /translation="MSYRLAADALVWLHLGFILFVLFGGLLPLRWPRLAWLHLPAVAW GCAVEFLGLPCPLTPLENRLRRAAGDAGYSGGFVEHYLLPLIYPAGLTPAVQWILGAI VLLVNLIAYLYLWHCRSSR" misc_feature 3791836..3792159 /locus_tag="PA3386" /note="Protein of Unknown function (DUF2784); Region: DUF2784; pfam10861" /db_xref="CDD:431525" gene 3792290..3793060 /gene="rhlG" /locus_tag="PA3387" /db_xref="GeneID:880033" CDS 3792290..3793060 /gene="rhlG" /locus_tag="PA3387" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="3-oxoacyl-ACP reductase" /protein_id="NP_252077.1" /db_xref="GeneID:880033" /translation="MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAE ACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALE SYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAY AYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIP MGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGFHL" misc_feature 3792299..3793048 /gene="rhlG" /locus_tag="PA3387" /note="RhlG and related beta-ketoacyl reductases, classical (c) SDRs; Region: RhlG_SDR_c; cd08942" /db_xref="CDD:187646" misc_feature order(3792335..3792352,3792407..3792415,3792479..3792490, 3792563..3792571,3792632..3792634,3792725..3792733, 3792773..3792775,3792785..3792787,3792863..3792874, 3792878..3792886) /gene="rhlG" /locus_tag="PA3387" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:187646" misc_feature order(3792635..3792637,3792731..3792733,3792773..3792775, 3792785..3792787) /gene="rhlG" /locus_tag="PA3387" /note="active site" /db_xref="CDD:187646" protein_bind complement(3792813..3792825) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(3792844..3792856) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 3793113..3793808 /locus_tag="PA3388" /db_xref="GeneID:880034" CDS 3793113..3793808 /locus_tag="PA3388" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine-dependent methyltransferase RcsF" /protein_id="NP_252078.1" /db_xref="GeneID:880034" /translation="MTHSVSPIGYIRSCFMEKFAIPRQPLLAPAARGTLELLPPFDQV EALEGLEQVSHVWLLFLFHQALEDKPRLKVRPPRLGGNRSLGVFATRATHRPNGIGQS VVRLEGFEAGRLWLSGIDLLDGTPVLDIKPYVPYADAVADARNGIADAPPPGIAVEWS EQARRQAHEHGQRLRQPVAELIEQCLAQDPRPAYQKPEPGRRYGVRLWDLDVHWHYPR PDLIRVLDVAGGD" misc_feature 3793116..3793571 /locus_tag="PA3388" /note="tRNA (Thr-GGU) A37 N6-methylase [Translation, ribosomal structure and biogenesis]; Region: TrmO; COG1720" /db_xref="CDD:441326" misc_feature order(3793131..3793136,3793248..3793256,3793260..3793262, 3793281..3793283,3793293..3793295,3793368..3793385, 3793395..3793397,3793401..3793403,3793407..3793409, 3793494..3793511) /locus_tag="PA3388" /note="homodimer interaction site [polypeptide binding]; other site" /db_xref="CDD:187753" misc_feature order(3793290..3793292,3793296..3793301,3793383..3793385, 3793407..3793409,3793413..3793415,3793470..3793472, 3793485..3793487) /locus_tag="PA3388" /note="cofactor binding site [active]" /db_xref="CDD:187753" misc_feature 3793569..3793760 /locus_tag="PA3388" /note="TrmO C-terminal domain; Region: TrmO_C; pfam18389" /db_xref="CDD:465738" gene complement(3793815..3794117) /locus_tag="PA3390" /db_xref="GeneID:880038" CDS complement(3793815..3794117) /locus_tag="PA3390" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252079.1" /db_xref="GeneID:880038" /translation="MYCIFIKARLRPGCAEAFIDAIQVNAAASVSTEPGCLVFDVSRD RQDPDLVYLYEVYRDDAAYEAHTRTAHFRDSRPLVEPLILEQEVFESDALALNPLR" misc_feature complement(3793848..3794114) /locus_tag="PA3390" /note="Quinol monooxygenase YgiN [Energy production and conversion]; Region: YgiN; COG1359" /db_xref="CDD:440970" gene 3794178..3794591 /locus_tag="PA3389" /db_xref="GeneID:880039" CDS 3794178..3794591 /locus_tag="PA3389" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ring-cleaving dioxygenase" /protein_id="NP_252080.1" /db_xref="GeneID:880039" /translation="MSDRPARPSRLNGLRHLALLVPNLEECERFYVDVLGMEVLNRAN EDLVYLTCGNDNLSLGRAHAASNGLQTMDHYGFVVDSVEELEAWYRYLKALGVTLLDQ PFDHGDGARSFHLLDPAGNKVQPLYHPAVSGQRLA" misc_feature 3794208..3794564 /locus_tag="PA3389" /note="Catechol-2,3-dioxygenase [Secondary metabolites biosynthesis, transport and catabolism]; Region: CatE; COG2514" /db_xref="CDD:442004" gene 3794819..3796966 /gene="nosR" /locus_tag="PA3391" /db_xref="GeneID:879823" CDS 3794819..3796966 /gene="nosR" /locus_tag="PA3391" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="regulatory protein NosR" /protein_id="NP_252081.1" /db_xref="GeneID:879823" /translation="MRALRFSAGSWRCVFAWMLLLVGLAAQGAELSELERLRIAQVFP AVERIGDPEGDYGVRRLSKGEETLGYAFQTLSVTDIPAYSGKPINLQVILDPQAVIRD AYVLEHHEPILLIGIPEEKLHAFSARYDGVRADQRVVVGRSSDPQAVTVDAVSGATVT VMVVNEIVMRAAHTVAVALGLIEDRGNVRPKPAQVRQQPAATASWSELLGNGAIRRLQ LSRGQIDDAFKGSEAEGIGEADAAHRDEPFIDLYSALLNPPAVGRSLLGDNQYRELMA SLKPGEYAFVVLGDGEYSFKGSGYVRGGIFDRVQLRQFGDIISFRDLDYQRLSDVYAE GMPEFREMAIFVARASQRFDPGSPWTLELLVRRQTGPVAGVFTSFELACQTPEEYLER PQPTAEELAALEEAARPLWLRVWYQKSFQVGVLCTALVLLLAILFLQDRLVRRPRLMQ RLRTGYLAFTLVYLGWYSLGQLSVVNVLTFVHALFEGFRWELFLSDPLLFILWTFTAA SLLLWGRGVFCGWLCPFGALQELLNELARKLRVPQFQVPFAVHERLWAIKYIILLVLF GLSLESLALAEQAAEVEPFKTAITLGFDRQWWFVAYAVALLVVNLFTRKVYCRYLCPL GAALAIPAKARLFDWLKRRAECGRPCQLCARECEIQAIHPDGRIEANECHYCLDCQMT YHDQDKCPPLVNKRKKRAKSAPADNARIPAENL" misc_feature 3794837..3796957 /gene="nosR" /locus_tag="PA3391" /note="Transcriptional regulator NosR of nitric oxide reductase [Transcription]; Region: NosR; COG3901" /db_xref="CDD:443108" gene 3797009..3798919 /gene="nosZ" /locus_tag="PA3392" /db_xref="GeneID:879824" CDS 3797009..3798919 /gene="nosZ" /locus_tag="PA3392" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nitrous-oxide reductase" /protein_id="NP_252082.1" /db_xref="GeneID:879824" /translation="MSDDTKSPHEETHGLNRRGFLGASALTGAAALVGASALGSAVVG REARAAGKGERSKAEVAPGELDEYYGFWSGGHSGEVRVLGVPSMRELMRIPVFNVDSA TGWGLTNESKRVLGDSARFLNGDCHHPHISMTDGKYDGKYLFINDKANSRVARIRLDV MKCDRIVTIPNVQAIHGLRLQKVPHTRYVFCNAEFIIPHPNDGSTFDLSGDNAFTLYN AIDAETMEVAWQVIVDGNLDNTDMDYSGRFAASTCYNSEKAVDLGGMMRNERDWVVVF DIPRIEAEIKAKRFVTLGDSKVPVVDGRRKDGKDSPVTRYIPVPKNPHGLNTSPDGKY FIANGKLSPTCTMIAIERLGDLFAGKLADPRDVVVGEPELGLGPLHTTFDGRGNAYTT LFIDSQLVKWNLADAVRAYKGEKVDYIRQKLDVQYQPGHNHATLCETSEADGKWIVVL SKFSKDRFLPTGPLHPENDQLIDISGEEMKLVHDGPTFAEPHDCILARRDQIKTRKIW DRKDPFFAETVKRAEKDGIDLMKDNKVIREGNKVRVYMVSMAPSFGLTEFKVKQGDEV TVTITNLDEIEDVTHGFVMVNHGVCMEISPQQTSSITFVADKPGVHWYYCSWFCHALH MEMCGRMLVEKA" misc_feature 3797027..3798916 /gene="nosZ" /locus_tag="PA3392" /note="nitrous-oxide reductase; Validated; Region: PRK02888" /db_xref="CDD:235082" gene 3798916..3800202 /gene="nosD" /locus_tag="PA3393" /db_xref="GeneID:880013" CDS 3798916..3800202 /gene="nosD" /locus_tag="PA3393" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="copper-binding periplasmic protein" /protein_id="NP_252083.1" /db_xref="GeneID:880013" /translation="MIHAARSLAGSRAGPLLALLLLGLATARAEPVDGLPLRADGDGR WSLAAGRYAGNFVIDRPLHLRCEAGAELDGGGHGSLLTLTSPGITVEGCRLRNWGRNL TELDAAIFVGKAASGAVIRGNDLRGAGFGVWLDATVGAQVLDNRIEGDESVRSQDRGN GIHLYAVKDALVRGNRVSHTRDGVYIDTSNDSSIEANRFEELRYGVHYMFTHNSRVTD NLTRRTRTGYALMQSRKLTVTGNRSIDDENYGILMNYITYSTLAGNRVEGVRSGSTGD AMISGAEGKALFIYNSLFNRIEGNSFADSALGIHLTAGSEDNRIAGNAFIGNRQQVKY VASREQEWSADGRGNYWSDYLGWDRDDDGLGDVAYEPNDNVDRLIWLYPQVRLLLNSP SIELLRWVQRAFPVVRSPGVRDSHPLMRMPAAEPRP" misc_feature 3799030..3800175 /gene="nosD" /locus_tag="PA3393" /note="nitrous oxide reductase family maturation protein NosD; Region: NosD_copper_fam; TIGR04247" /db_xref="CDD:275079" gene 3800199..3801113 /gene="nosF" /locus_tag="PA3394" /db_xref="GeneID:879977" CDS 3800199..3801113 /gene="nosF" /locus_tag="PA3394" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="copper ABC transporter ATP-binding protein" /protein_id="NP_252084.1" /db_xref="GeneID:879977" /translation="MSLVEIDGATLRYGALTALSGLDLRLEPGEVLGLLGHNGAGKTT TIKLVLGLLAPSEGRVRVLGHDARSLEARRQLGYLPENVTFYPQLSGAETLRHFARLK GVAPAEAARLLEQVGLGHAARRRLKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLD PLATVELYQLLDRLRGQGTGIVLCSHVLPGVETHIDRAAILAGGRLQVAGSLAELRRK AALPTRVRLASPHNPQWLERWHRAGLAARRLDDQRIEVLLDDAERDGVLEALLAAREF DLEILPPSLEDLYRHHMSPAPAGATPCP" misc_feature 3800208..3800855 /gene="nosF" /locus_tag="PA3394" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" gene 3801104..3801931 /gene="nosY" /locus_tag="PA3395" /db_xref="GeneID:879978" CDS 3801104..3801931 /gene="nosY" /locus_tag="PA3395" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="membrane protein NosY" /protein_id="NP_252085.1" /db_xref="GeneID:879978" /translation="MPVVWTIARKELADGLRNRWLLAISLLFALLSVGIAWFGAAAAG QVGFTSVPATVASLTSLATFLMPLIALLLAYDAIVGEEEGGTLLLLLTYPLGRGQLLL GKFLGHGLILALATLIGFGSAALAILALVPEVEAAILLGAFGRFMGSSLLLGCVFLAL AYALSSRASEKSSAAGQALGLWFFFVLLFDLALLAILVLSQGHLSPRLLPWLLLLNPT DLYRLINLSGFDAAAAGGVVPLASDLPVSASALWLALALWAGAALALAHGLFRRRPI" misc_feature 3801113..3801697 /gene="nosY" /locus_tag="PA3395" /note="ABC-type transport system involved in multi-copper enzyme maturation, permease component [Posttranslational modification, protein turnover, chaperones]; Region: NosY; COG1277" /db_xref="CDD:440888" gene 3801948..3802484 /gene="nosL" /locus_tag="PA3396" /db_xref="GeneID:879912" CDS 3801948..3802484 /gene="nosL" /locus_tag="PA3396" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="acessory protein NosL" /protein_id="NP_252086.1" /db_xref="GeneID:879912" /translation="MQRHTLPLRPLLGTLLLGLLLAGCDASRDDATALGPVPIASGDE CHVCGMLIEEMPGPKGESVLPGAVRKFCSTAELFGWWLQPENRQGQARLYVHDMSQAD WRHPDDARLIDATRAYYVVGIQRPGGMGATLASFADEEAATRLAAEEGGRVLRFDEID QAVLQGVGGDHPHRHPAH" misc_feature 3802059..3802439 /gene="nosL" /locus_tag="PA3396" /note="Region: NosL; pfam05573" /db_xref="CDD:461680" gene complement(3802567..3803343) /gene="fpr" /locus_tag="PA3397" /db_xref="GeneID:879913" CDS complement(3802567..3803343) /gene="fpr" /locus_tag="PA3397" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ferredoxin-NADP reductase" /protein_id="NP_252087.1" /db_xref="GeneID:879913" /translation="MSNLYTERVLSVHHWNDTLFSFKTTRNPGLRFKTGQFVMIGLEV DGRPLMRAYSIASPNYEEHLEFFSIKVPDGPLTSRLQHLKEGDELMVSRKPTGTLVHD DLLPGKHLYLLSTGTGMAPFLSVIQDPETYERYEKVILVHGVRWVSELAYADFITKVL PEHEYFGDQVKEKLIYYPLVTREPFRNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMI CGSPSMLEETSAVLDSFGLKISPRMGEPGDYLIERAFVEK" misc_feature complement(3802582..3803322) /gene="fpr" /locus_tag="PA3397" /note="Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently...; Region: FNR1; cd06195" /db_xref="CDD:99792" misc_feature complement(order(3802582..3802584,3802993..3802995, 3803113..3803118,3803122..3803124,3803131..3803133, 3803137..3803139,3803143..3803145,3803182..3803193, 3803233..3803235)) /gene="fpr" /locus_tag="PA3397" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99792" misc_feature complement(order(3803182..3803187,3803191..3803193)) /gene="fpr" /locus_tag="PA3397" /note="FAD binding motif [chemical binding]; other site" /db_xref="CDD:99792" misc_feature complement(order(3803053..3803055,3803059..3803061, 3803086..3803088,3803104..3803106,3803113..3803115, 3803122..3803124)) /gene="fpr" /locus_tag="PA3397" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99792" misc_feature complement(order(3802981..3802983,3802987..3802998, 3803008..3803010)) /gene="fpr" /locus_tag="PA3397" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99792" misc_feature complement(order(3802681..3802686,3802909..3802917, 3802990..3802995)) /gene="fpr" /locus_tag="PA3397" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99792" gene 3803617..3804543 /locus_tag="PA3398" /db_xref="GeneID:879954" CDS 3803617..3804543 /locus_tag="PA3398" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252088.1" /db_xref="GeneID:879954" /translation="MKFTLRQLEVFVAVAQQESVSRAAEGLSLSQSATSTSLGELERQ FDCKLFDRAGKRLTLNALGRQLLPQAVALLDRGEEIENLLNGKTAFGSLDLGATLTIG NYLATLLIGAFMQRQPDCRVRLHVHNTAQVVQQVAHYELDLGLIEGDCRHPDIEVQPW MEDELVVFCAPQHPLARRGGADLERLTREAWILREQGSGTRLTFDQAMRHHPRPLNIR LELEHTEAIKRAVESGLGIGCISRLALRDAFRRGSLVPVETPGLDLRRQFYFIWHKQK YQTATMREFLDLCRSETAGISRSDEIVLPLIP" misc_feature 3803617..3804495 /locus_tag="PA3398" /note="putative DNA-binding transcriptional regulator; Provisional; Region: PRK10837" /db_xref="CDD:182768" gene complement(3804545..3804886) /locus_tag="PA3399" /db_xref="GeneID:879955" CDS complement(3804545..3804886) /locus_tag="PA3399" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252089.1" /db_xref="GeneID:879955" /translation="MFRSGLSLLVLLGLATLGGCGSVNTLVRDDASAAHDLRLKATAC TSLPRVYSGVSYTFCRLNVKTGSPVAPAQADGILEVLALDFALSGVIDTLALPYTSYR QYRDGNLSLAN" misc_feature complement(3804590..3804745) /locus_tag="PA3399" /note="Protein of unknown function (DUF1375); Region: DUF1375; pfam07119" /db_xref="CDD:429301" gene complement(3804940..3806073) /locus_tag="PA3400" /db_xref="GeneID:879900" CDS complement(3804940..3806073) /locus_tag="PA3400" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252090.1" /db_xref="GeneID:879900" /translation="MKNYLQILRETLKAMLSKPMWLMVVASVCITSLPYMNHTALDLP VAVVDEDHSDVSRELVRLLDSAPKVAVVGYDSLPQAKRDLAWRKLYAIIVIPLNFEKR LLRGEALVIPYFGDATNRMANGQIQQDISAVYSALTNRYNAALLEREGFTATQAQVVL SPLVGQLTDLFNPGISFAAIVLPGLLSLILQHSLLLGCTRGNIMLRGGTPRYMRQPLS TRFGRYSAQLLIWTVLAMLFYVIWPHLLGYRQSASFFMLLGIVLPFLIAVIALSEFIA ELLPTEESVYLTMTFITLPLFYMAGYSWPEQAMPDWVRWLADAIPSTWAIRAIAEMNQ MDLPLREVSDHALVLLGMAATYALLGTLLYQYRNWRWDNVKGW" misc_feature complement(3804988..3806013) /locus_tag="PA3400" /note="ABC-2 family transporter protein; Region: ABC2_membrane_3; pfam12698" /db_xref="CDD:463674" gene complement(3806070..3807242) /locus_tag="PA3401" /db_xref="GeneID:879901" CDS complement(3806070..3807242) /locus_tag="PA3401" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252091.1" /db_xref="GeneID:879901" /translation="MAWAALKRNASRFVQAFNTETRIACRSWTIHWLGWCWPLLLFGV ISGVYQAGTLLDMPLAVIDKDHSQLSRKLIRELDATSHAQVITVPAGVQEGLDAIRRA DAYALLYIPPDFEADVLGGRAPKAELYYNALLYSAGYAATQDFSALVASLNGELRPRL AAGMPAALPHLASISVSYDSLFNASGNYIYYQQFAAIVHLLQLFVIVTMVHVLAREAP ELRASSPHILRAKALGVRLVGKLAPYTLLFTALLMLEIFLLVAFSGARINGSPLAMLM ITLFYVIAAQSVGLVLFVFTANRFTAYSLVGMLIGVAQTYSGVLIPELAMPTLARVIA EAEPLTHTLHGLFDQFLRQAPPSSALYTCAKLALYPLIAYMIAKMRLRSRLDLSPI" misc_feature complement(3806112..3807131) /locus_tag="PA3401" /note="ABC-2 family transporter protein; Region: ABC2_membrane_3; pfam12698" /db_xref="CDD:463674" protein_bind complement(3806654..3806666) /locus_tag="PA3401" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3401" /bound_moiety="AmrZ" gene complement(3807246..3808217) /locus_tag="PA3402" /db_xref="GeneID:879960" CDS complement(3807246..3808217) /locus_tag="PA3402" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252092.1" /db_xref="GeneID:879960" /translation="MKGWKLFTPLLILAIVAITLYLRLHNPPLLLQGEADATNVIVSS KAKGRVQVLHVRRGDEVKQGDLLISLDSPELEAQLDALHAARNQAQAQLDESLHGTRE ESIRALKASLAQAEAELRNAESDFQRNQQMVERGFLSRTQFDLSRRERDVARDRVAEA RANLDEGLKGDREERRQALQAAVRRADAQIAELQAQIDDLQVRAPVNGEVGPIPAEQG ELINAYSPLLTLVRLDDSYFVFNLREDILAKVRKGDRIVMQVPGLGGAEVETELRYIA PLGDFSTRRATRATGDFDLKTFETRFYPLQPTPGLRPGMSALWRWTN" misc_feature complement(3807267..3808217) /locus_tag="PA3402" /note="Multidrug resistance efflux pump EmrA [Defense mechanisms]; Region: EmrA; COG1566" /db_xref="CDD:441174" gene complement(3808318..3808803) /locus_tag="PA3403" /db_xref="GeneID:879961" CDS complement(3808318..3808803) /locus_tag="PA3403" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252093.1" /db_xref="GeneID:879961" /translation="MKQNWAERLRASMHHQAESLGNLLVEAFHYLALFAIGATVFWAA GAAFLGMVNKGHASIDDILLLFIYLELGAMVGIYFKTNHMPVRFLIYVAMTALTRLMI ADIQHNHTPDDGIILVSVALLLLALAILVVRFASARFPSAKSDGAAARRVASEDAEGE A" misc_feature complement(<3808480..3808770) /locus_tag="PA3403" /note="Phosphate starvation-inducible membrane PsiE (function unknown) [General function prediction only]; Region: PsiE; COG3223" /db_xref="CDD:442456" gene 3808978..3809265 /locus_tag="PA3403a" /db_xref="GeneID:17373372" CDS 3808978..3809265 /locus_tag="PA3403a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719766.1" /db_xref="GeneID:17373372" /translation="MTDSSPFQLLTEAFQAEYRVNLSLERPDGSIVLTLSNERGVAAK RLIRPAQLHDLEQLQRMIESIRFGIAIENGTSAPQLLQAMTQGKARWPIAI" misc_feature 3808993..3809238 /locus_tag="PA3403a" /note="Protein of unknown function (DUF3509); Region: DUF3509; pfam12021" /db_xref="CDD:432267" gene complement(3809258..3810613) /locus_tag="PA3404" /db_xref="GeneID:880018" CDS complement(3809258..3810613) /locus_tag="PA3404" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252094.1" /db_xref="GeneID:880018" /translation="MNRLRACLLSSALLSASSAQALGLLDAYQLAVRHDPTFQAALHE RRAGSENRAIGRAGLLPSLRYDYNKARNDSTVSQGDARVERDYRSYASTLSLEQPLFD YEAYARYRQGEAQALFADEQFRGRSQELAVRLFAAYSETLFAREQVVLAEAQRRALET QLAFNQRAFEEGEGTRTDLLETRARLSLTRAEEIAASDRAAAARRTLEAMLGQALEDR ELAAPIERFPALRLQPATFEGWRQVALQRSAELGAQRHALEAAAYEVERNRAGHLPRL SLYASSSKTHSASESTYEQKYDTDSVGLRLSLPLFEGGRVSAATRQAGDKYAQAQAEL DAQVASVINDLHSQFDLTASSLAKVRAYEMAVAAAREQVTATRRSVAGGERVNRDVLD AEQQFYGARRDLAEARYAYLNAWLRLRQLAGVLEDRDLAVLAAYFGAGEGRAQVTAAI R" misc_feature complement(3809303..3810547) /locus_tag="PA3404" /note="outer membrane channel protein; Reviewed; Region: tolC; cl30340" /db_xref="CDD:357216" gene complement(3810610..3811941) /gene="hasE" /locus_tag="PA3405" /db_xref="GeneID:880019" CDS complement(3810610..3811941) /gene="hasE" /locus_tag="PA3405" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="metalloprotease secretion protein" /protein_id="NP_252095.1" /db_xref="GeneID:880019" /translation="MSGQARLREVGAGGAALELDEKRFSRLGWGLVLLGFVGFLLWAG LAPLDKGVGVSGTVMVAGSRKAVQHPTGGLVRHIRVHEGERVEAGQVLLEMDATQARA QADGLFAQYLAALASLARLSAERDEKARIEFPAELLALDDPRLPTLLEQQRQLHDSRR RALRLELDGLAETVAGSQAQLDGLQAALRSKEQQRAALEEQLRGLRQLASEGYVPRNR LLDSERLLAQVNGEIAGDLGSLGSTRRQILELRLRMAQRREKFQEEVRASLADAQVRA EELRNRLASARFDLANSEVRAPVAGLVVGQEVFTEGGVIAPGQQLMEILPERQPLLVD ARLPVEMVDKVRVGLPVELMFSAFNQSTTPRVEGEVTLVSADRLLDERSEAPYYRVRI RVGEEGVRRLAGLEIRPGMPVEAFVRSGERSLLNYLFKPLADRTHLALGEE" misc_feature complement(3810613..3811878) /gene="hasE" /locus_tag="PA3405" /note="type I secretion membrane fusion protein, HlyD family; Region: type_I_hlyD; TIGR01843" /db_xref="CDD:130902" gene complement(3811938..3813740) /gene="hasD" /locus_tag="PA3406" /db_xref="GeneID:878849" CDS complement(3811938..3813740) /gene="hasD" /locus_tag="PA3406" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transporter HasD" /protein_id="NP_252096.1" /db_xref="GeneID:878849" /translation="MKLRPASPRNEILATLGRFRPALRSVALFTAVINLLMLAPSLYM LQVYDRVLGSGNHMTLLMLTLMVLGLYLLLGALEWVRSLVVIRLGGQLDMQLNQRIYD ASFRASLERGEQAAGQALNDLTSLRQFLTGNALFAFFDAPWFPLYLLVIFLFSPWLGL LALAGALLLVLLAWVNESRSREPLAEAGQLSILATQQASANLRQAETLAAMGMLPAMR ARWFAQHQAFLARQNLGSERSAAIGATSKGVRLALQSLVLGLGAWLAVDGLITPGMMI AGSILMGRVLSPIDQLIAVWRQWSGARQAYQRLARLLEENPPAALGMPLPAPRGALRV ERLCAAAPGREQALLQDLGFALEPGEALGVIGPSGSGKSTLARLLVGAWQPLSGAVRL DGADLRQWSAAALGPHIGYLAQDVQLFAGSIAENIARFAEVDAEKVVAAARLAGVHDL VLRLPQGYDTRLGDGGAGLSGGQRQRIGLARALYGRPALIVLDEPNASLDEAGEAALA EAIAAMRRQGSSLVLVTHKPAVLALTDKLLLLHGGRLQRFGATAEVLASASPPAAAAP APAPAPTRPTPAFGFGYRPGPGMPVGGVPGGAAR" misc_feature complement(3812076..3813731) /gene="hasD" /locus_tag="PA3406" /note="ABC-type protease/lipase transport system, ATPase and permease components [Intracellular trafficking, secretion, and vesicular transport]; Region: ArpD; COG4618" /db_xref="CDD:443660" gene complement(3813958..3814575) /gene="hasAp" /locus_tag="PA3407" /db_xref="GeneID:879854" CDS complement(3813958..3814575) /gene="hasAp" /locus_tag="PA3407" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="heme acquisition protein HasA" /protein_id="NP_252097.1" /db_xref="GeneID:879854" /translation="MSISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTG GFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGA SSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVD PSLSINSTFDQLAAAGVAHATPAAAAAEVGVVGVQELPHDLALAA" misc_feature complement(3814045..3814575) /gene="hasAp" /locus_tag="PA3407" /note="Heme-binding protein A (HasA); Region: HasA; pfam06438" /db_xref="CDD:428943" gene complement(3814661..3817336) /gene="hasR" /locus_tag="PA3408" /db_xref="GeneID:879855" CDS complement(3814661..3817336) /gene="hasR" /locus_tag="PA3408" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="heme uptake outer membrane receptor HasR" /protein_id="NP_252098.1" /db_xref="GeneID:879855" /translation="MKHRGWSAVRGGRKGAQLALGLGLVLLGTAALPLHAQDGADSAS QQQTALRRVRLDIPAQPLNRALLRFAEQAGVQVFFDSQRFAGLGSAAVHGEYLLADGL SQMLQGSPVEYRFSGKDQLSLIRVSQDDLVQMSPSVISAARPDDWVYQTPHSVSVIGR EQIERNPPRHAADMLEETPGVYSSVSQQDPGLSVNIRGIQDYGRVNMSVDGMRQNYQQ SGHQQRNGTLYVDPELLSEVVIDKGASSAMGGAGVIGGIANFRTLEARDLVRPGKQVG GRVRLTSGLGGDANGTHFIGSAAFAIGTEVWDMLVAASERHLGDYDPGTKGSIGELRT GAWFNPEAGQRVKHSPVAYSGYVMRSRLAKLGVALPQDQRLQFSYLTTQVSYDDANML NTENQALWEKLGSSDVRAQNFAIDYGYAPDNPLVDFKAKLYYVDNRNRQQTLQRGITP GYSITYQTDTYGAQAQNTSTFALDDLSTLRANYGLEFFYDKVRPDSSQPRASTSAVGF PAAEGMTPKGDRALGSLFARLDYDYDDWLNLNAGLRYDRYRLRGDTGFNARTFILGTT RQTDMPLQYAVDREEGRFSPTFGLSVKPGVDWLQLFATYGKGWRPPAVTESLITGRPH GGGAENMYPNPFLSPERSKAWEVGFNVLKENLWFSDDRLGLKVAYFDTRVDDFIFMGM GMQPPGYGMAGIGNSAYVNNLDSTRFRGVEYQLDYDAGLAYGQLSYTHMIGSNDFCSK TAWLGGVTQTVKGSGRRPPVIDMRPDEQANAATHCSAVLGSAEHMPMDRGSLTLGMRF FDRRLDVGARARYSEGYSVAGGATVSQAGVYPADWKEYTVYDLYGSYRVSDELTLRLA MENVTDRAYLVPLGDVLAFTLGRGRTLQGTLEYQF" misc_feature complement(3816962..3817114) /gene="hasR" /locus_tag="PA3408" /note="Secretin and TonB N terminus short domain; Region: STN; smart00965" /db_xref="CDD:198033" misc_feature complement(3814664..3816937) /gene="hasR" /locus_tag="PA3408" /note="TonB-dependent heme/hemoglobin receptor family protein; Region: TonB-hemin; TIGR01785" /db_xref="CDD:273807" gene complement(3817546..3818532) /locus_tag="PA3409" /db_xref="GeneID:878697" CDS complement(3817546..3818532) /locus_tag="PA3409" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transmembrane sensor" /protein_id="NP_252099.1" /db_xref="GeneID:878697" /translation="MNSPQEQQQIRQQAAEWAIRLDGGDLDRSRREALDGWLAADPRH RAALALAQRTWKQLGSLAEPRTMVQTPVASAPRRAGGRRKGWRGWAAAAAVLLALGSA WNERDAGVSWLADHSTGKGEVRILRLVDGSEVELDAQSAIDVAYDSRERRVRLLEGSA IFRAAPRAGRETRPFVVESAGGSTRALGTRFLVSRNDDGSVQVGVLEHRVAVALAHPR TGTVGRRELGEGESLRYSAEGGVEAPLGGRLDDLTSWRRGLLVFDEQPLGEVVARLNR YRPGHLLVAPGALAQRRVSGVFRVADLEASLQSISDELGVRSLGLAGVTLLY" misc_feature complement(3818371..3818484) /locus_tag="PA3409" /note="Domain of unknown function (DUF4880); Region: DUF4880; pfam16220" /db_xref="CDD:435227" misc_feature complement(3817582..3818325) /locus_tag="PA3409" /note="Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport [Inorganic ion transport and metabolism, Signal transduction mechanisms]; Region: FecR; COG3712" /db_xref="CDD:442926" gene complement(3818597..3819112) /locus_tag="PA3410" /db_xref="GeneID:878698" CDS complement(3818597..3819112) /locus_tag="PA3410" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ECF subfamily sigma-70 factor" /protein_id="NP_252100.1" /db_xref="GeneID:878698" /translation="MDAPLAEQDLKALFLRHARQLQSYLLRKTRDPHLAADLAQESFL RLAEQRHKEPIEHVDAYLYRTAHNLTIDHYRQERRRRTETQPNDDLAGFVADQPGPEE SAVDADALARLREIVAELPPRTREIFRLNRLEGLTHAEVARRLEISDSSVQKHLARTL AHVMQALEDSR" misc_feature complement(3818600..3819094) /locus_tag="PA3410" /note="DNA-directed RNA polymerase specialized sigma subunit, sigma24 family [Transcription]; Region: RpoE; COG1595" /db_xref="CDD:441203" protein_bind 3819144..3819162 /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA3410" /bound_moiety="Fur" protein_bind complement(3819150..3819168) /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452." /bound_moiety="Fur" gene complement(3819189..3819407) /locus_tag="PA3411" /db_xref="GeneID:879796" CDS complement(3819189..3819407) /locus_tag="PA3411" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252101.1" /db_xref="GeneID:879796" /translation="MQDLGFALLLIGYVWSVASGGRRSIPCALLCLLLFPLAQLAFAI NDAPMRPPLALAAFGAGLAYLGGGSVFG" gene complement(3819527..3819796) /locus_tag="PA3412" /db_xref="GeneID:879797" CDS complement(3819527..3819796) /locus_tag="PA3412" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252102.1" /db_xref="GeneID:879797" /translation="MRVIPLALVALLGLAPLAQAQQQPYGPNPDSKSLRQHYVEGRLD IARVIYKTDLWSACGIVPARLVYEDSQGERHTVEYKAWGSGCSGN" misc_feature complement(3819536..3819736) /locus_tag="PA3412" /note="Protein of unknown function (DUF2790); Region: DUF2790; pfam10976" /db_xref="CDD:431571" protein_bind 3819900..3819912 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3413" /bound_moiety="AmrZ" gene 3820006..3820272 /locus_tag="PA3413" /db_xref="GeneID:878733" CDS 3820006..3820272 /locus_tag="PA3413" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252103.1" /db_xref="GeneID:878733" /translation="MAVEVVYRSSRDQERLFMDKAEADRYDKMLELAETLAEVLQKAV PSLKEEQVEELGIFMAKNRDAFARAFKNQPDALNELFEENAADE" misc_feature 3820009..3820269 /locus_tag="PA3413" /note="dsDNA-binding SOS-regulon protein YebG, induction by DNA damage requires cAMP [Replication, recombination and repair]; Region: YebG; COG3141" /db_xref="CDD:442375" gene 3820308..3820892 /locus_tag="PA3414" /db_xref="GeneID:878734" CDS 3820308..3820892 /locus_tag="PA3414" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252104.1" /db_xref="GeneID:878734" /translation="MPRQLAGLLCVLLGLAGAPALACPFRATDAETPAASAGAAQVLA LGGTGRLQLDLQRAPATLLHSGDLLIARYAEGHYLAHRLLEGNEMGADEGERLDLPRQ VRLLFGALPLDGLPDAERERLQAQRQALGLCDRRASVSRYRVAGTEVYRLRGSQAGKP YHALYLLDGPQVHYLDSSGSDAFIEQLLASLRRR" gene complement(3821385..3822497) /locus_tag="PA3415" /db_xref="GeneID:878691" CDS complement(3821385..3822497) /locus_tag="PA3415" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="branched-chain alpha-keto acid dehydrogenase subunit E2" /protein_id="NP_252105.1" /db_xref="GeneID:878691" /translation="MKHFKLPDLGEGLQEAEIVEWHVKAGDSVRADQRLVSVETAKAL VDIPAPYDGVVGKLFGAEGDILHVGEPLVGFEGEEADAGTVVGRLEGGGSALEDRFFI GAAPSTREHLAPRATPAVRQFARQQGVELAGLSGSGPDGLITRADVEAAAQGTRERFG GERLRGVRRSMALNMARSHAEVVPVTIYGDADLHRWKTARDPLIRLAQALAEACRAEP TLNAWFDGASLSLKLHERLDLGIAVDTPDGLFVPVLRDVGARSAEDLRAGMRRLREDV QARSIPPAEMLGATLTLSNFGTLFGRYANPVVVPPQVAILGAGGIRDEVVAWRGEMAI HPILPLSLSFDHRAATGGEAARFLKVLVNALEQPDG" misc_feature complement(3821394..3822497) /locus_tag="PA3415" /note="branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed; Region: PRK11856" /db_xref="CDD:237001" gene complement(3822515..3823516) /locus_tag="PA3416" /db_xref="GeneID:878692" CDS complement(3822515..3823516) /locus_tag="PA3416" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase E1 component subunit beta" /protein_id="NP_252106.1" /db_xref="GeneID:878692" /translation="MNERNGEAKRLALLEAVNLALHRAMAEDETVVVLGEDVGVNGGV FRATLGLRERFGFKRVLDTPLAENMIAGLSIGMAAQGLKPVMEIQFMGFIYAAMEQLV SHASRLRNRTRGRLACPLVLRTPMGAGIRAPEHHSEATEAMFAHIPGVRVLVPSSPAR AYGLLLAAIDDPDPVIFLEPTRLYRMNPQPLADDARRLPLDSCFTLREGGDLTLVSWG ASVHETQQAAERLAQRGIEAEVIDVACLKPLDLDTLEASVRKTGRCVIVHEAPKSGGL GGEIAASLYERVLFDLRAPIQRVAAADIPPPLYRLEPLYMPAVEDILAACDTVLGYA" misc_feature complement(3822521..3823492) /locus_tag="PA3416" /note="Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component, beta subunit [Energy production and conversion]; Region: AcoB; COG0022" /db_xref="CDD:439793" gene complement(3823509..3824606) /locus_tag="PA3417" /db_xref="GeneID:879876" CDS complement(3823509..3824606) /locus_tag="PA3417" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase E1 component subunit alpha" /protein_id="NP_252107.1" /db_xref="GeneID:879876" /translation="MVHNRIDPPFTRYLDSDGRPLGELPAWAGDSDALVGLYRQMLLT RLFDQKAVALQRTGRIGTYAPTLGQEAIGVAIGSQMRAEDVLVPYYRDTAVQLMRGVR MEDILLYWGGDERGSDYAEPLAAQDFPICVPIATQALHACGVASAFRIRGEHRVAVTT CGDGATSKGDFLEALNVAGAWQLPVLFVVNNNQWAISVPRRIQCGAPTLAEKAVGAGF PGEQVDGNDVLAVAERVRAALERARQGKGPTLLECISYRLCDHTTADDASRYRSAEEV NQAWREEPIKRLRAFLAGRGQWDEEREQALVGECQARVQEAVERFETFAAQAPQALFE HVYARWPAVLEEQREQLLERAARRRGGAEHE" misc_feature complement(3823554..3824582) /locus_tag="PA3417" /note="pyruvate dehydrogenase E1 component, alpha subunit; Region: PDH_E1_alph_x; TIGR03181" /db_xref="CDD:213783" misc_feature complement(order(3823824..3823826,3824025..3824027, 3824031..3824033,3824112..3824123,3824205..3824207, 3824211..3824213,3824334..3824339)) /locus_tag="PA3417" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:238958" misc_feature complement(order(3823800..3823802,3823812..3823814, 3823956..3823958,3823971..3823973,3824013..3824024, 3824067..3824069,3824079..3824081,3824091..3824093, 3824100..3824111,3824115..3824117,3824208..3824213, 3824271..3824273)) /locus_tag="PA3417" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:238958" misc_feature complement(order(3824067..3824069,3824076..3824081, 3824097..3824102,3824157..3824159,3824166..3824171, 3824175..3824180,3824187..3824192,3824199..3824201, 3824214..3824216,3824220..3824222,3824226..3824228)) /locus_tag="PA3417" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:238958" misc_feature complement(order(3823755..3823763,3823785..3823817, 3823821..3823841)) /locus_tag="PA3417" /note="phosphorylation loop region [posttranslational modification]" /db_xref="CDD:238958" gene complement(3824748..3825773) /gene="ldh" /locus_tag="PA3418" /db_xref="GeneID:879877" CDS complement(3824748..3825773) /gene="ldh" /locus_tag="PA3418" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="leucine dehydrogenase" /protein_id="NP_252108.1" /db_xref="GeneID:879877" /translation="MFDMMDAARLEGLHLAQDPATGLKAIIAIHSTRLGPALGGCRYL PYPNDEAAIGDAIRLAQGMSYKAALAGLEQGGGKAVIIRPPHLDNRGALFEAFGRFIE SLGGRYITAVDSGTSSADMDCIAQQTRHVTSTTQAGDPSPHTALGVFAGIRASAQARL GSDDLEGLRVAVQGLGHVGYALAEQLAAVGAELLVCDLDPGRVQLAVEQLGAHPLAPE ALLSTPCDILAPCGLGGVLTSQSVSQLRCAAVAGAANNQLERPEVADELEARGILYAP DYVINSGGLIYVALKHRGADPHSITAHLARIPARLTEIYAHAQADHQSPARIADRLAE RILYGPQ" misc_feature complement(3825384..3825707) /gene="ldh" /locus_tag="PA3418" /note="Glu/Leu/Phe/Val dehydrogenase, dimerization domain; Region: ELFV_dehydrog_N; pfam02812" /db_xref="CDD:460706" misc_feature complement(3824760..3825356) /gene="ldh" /locus_tag="PA3418" /note="NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase; Region: NAD_bind_Leu_Phe_Val_DH; cd01075" /db_xref="CDD:133444" misc_feature complement(order(3825009..3825011,3825015..3825017, 3825078..3825083,3825168..3825170,3825180..3825185, 3825240..3825248,3825252..3825254)) /gene="ldh" /locus_tag="PA3418" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:133444" misc_feature complement(3824919..3824921) /gene="ldh" /locus_tag="PA3418" /note="Phe binding site [active]" /db_xref="CDD:133444" gene 3826019..3826831 /locus_tag="PA3419" /db_xref="GeneID:878744" CDS 3826019..3826831 /locus_tag="PA3419" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252109.1" /db_xref="GeneID:878744" /translation="MDPRQACLDCLAQEPPALFEAALWIAAEHLPAYSPAHALRELDE LVRQIGASLDDRASASERAQGLLRRMSEQGFCEDDDFPLQPRSALLPLVLQRRQGQPL SLALVAMELARRLDIPLVGVNFPGRFLLRVPQADHLLDPATGRRLYTPDCRELLLRLQ GPKSELQAAYLKQASPGEILQRLSRNLRQLHSAAGEPLAALKDAQRVIELGPVGAADH EARAGLYRQLDCPQAERYDLERALLLSDDPTEQLRLGQRLGELAPPTSRALH" misc_feature 3826019..3826801 /locus_tag="PA3419" /note="Regulator of sirC expression, contains transglutaminase-like and TPR domains [Signal transduction mechanisms]; Region: SirB1; COG2912" /db_xref="CDD:442156" misc_feature 3826571..3826648 /locus_tag="PA3419" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276810" misc_feature 3826658..3826750 /locus_tag="PA3419" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276810" gene complement(3826838..3829321) /locus_tag="PA3420" /db_xref="GeneID:878745" CDS complement(3826838..3829321) /locus_tag="PA3420" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252110.1" /db_xref="GeneID:878745" /translation="MTEPTELPAALPRLPPQHLPRPRLHQPLLRGECRLRLLCAPAGS GKTVLLGECARRAPPGVQVVWLALGGEALDPATFRRRLAGALGLPEDSDEAQLCRRLR NASALWLLLDDYPRHPDPALDACLDRLLSAASPRVGWWLASRRRPQCNLARLLLEGEL LEVDGGLLAFDADEVAELLRLHGRSADAATAGTLLERSGGWCAALRLRLLVGEETAGP LLQEYLQHELLDELPPPLADAARALAWLPQVGLELFRRLFEELPHGLDDLLARGFPLL ADANQRYSLPPAIREAWREAPQRPQRDFHREACEWFAEHGETREAVDQALAADEPETA AGLLQKLTEEQLLHGHNIGMVLALRDELPAALLASTPRLVILNAWTLLYAGRLAEAED CIGQLARFLPMPSASRQRVLLAQWQGLFGILLHCRGERGAADYLREALEQLPEDAWSQ GLICRSALMQLAMIEGRMDQARLIGRDALRLAREHDSLIFEALIELERAQWLEQRGEL LRAEGVLDRAQRYLEDLGQQGSPMLGRIALRRARLCLQQGREVEAGHWYRLGLEQARE NLDPWALYGYLGLALLEAGQGDLDAAFNRLLEVERLMQQRHVPDPLYRGALLLVSSAL TLQQGRPAQAREILLRVRAYFQPGRARLSPPSEPELEARVEHQLALAELYSGEAAAAE ARLRGLLAILEAQGRQTLLCEVRMGIAECQFLSGQLPQAQQTLRSGLELAERLGLQLP QRRLRDRQPQLFAALPGEEEEGLSPLSCRELAVLGLIAQGCSNQEIGEQLFISLHTVK THARRINGKLGVARRTQAVARAKALGLLA" misc_feature complement(3826853..3829288) /locus_tag="PA3420" /note="HTH-type transcriptional regulator MalT; Region: PRK04841" /db_xref="CDD:235315" gene complement(3829471..3830841) /locus_tag="PA3421" /db_xref="GeneID:878810" CDS complement(3829471..3830841) /locus_tag="PA3421" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252111.1" /db_xref="GeneID:878810" /translation="MKTARLLSSGALALSLLAGSVTAAVSPDEAAKLGSSLTPIGAQK EGNADGSIPAWTGGLAASAGKVDGKGFLSDPFADEKPLFTITAQNVEQYKDKLSDGQL AMFKRYPETYRIPVYKTHRTVALPAEIDEAVKQSALNVQPINDGNGLSNFEKSRYYAF PIPKNGVEVLWNHITRYRGGNLKRTIVQATPQTNGSFTPIRFEESVAFPQNMPDLDQS KAANILTFFKQQVTAPARLAGNVLLVHETLDQVKEPRLAWVYNAGQRRVRRAPQVAYD GPGTAADGLRTSDNFDMFSGAPDRYDWKLVGKREMYIPYNAYKLNDPTLKYSDIIKAG HINQDLTRYELHRVWEVVGTVKPGERHIYAKRHMYIDEDSWQIALVDHYDGRGQLWRV GEGHAQYHYDQKVAGYTLEALYDVIAGRYLALGMNNEEKRGYEFGFKASSADYTPAAL RNAGVR" misc_feature complement(3829489..3830592) /locus_tag="PA3421" /note="Protein of unknown function (DUF1329); Region: DUF1329; pfam07044" /db_xref="CDD:429261" gene complement(3830898..3832655) /locus_tag="PA3422" /db_xref="GeneID:878811" CDS complement(3830898..3832655) /locus_tag="PA3422" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252112.1" /db_xref="GeneID:878811" /translation="MTTTKRRGIFPLHALAAATALGCATQASAVSFNIGEIEGQFDSS LSVGASWSMRSADKDYIGTRNGGHASSQTSDDGRLNFKKGETFSKIFKGIHDLELKYG DTGAFFRGKYWYDFELKDEHRLLYDIDDHNRKEGAKSSGAQLLDAFLYHNYSIGDLPG SVRVGKQVVSWGESTFIQNSINSINPMDVAAFRRPGAEIKEGLIPVNMLYLSQGISDA LTVEGFYQLEWDQTVIDNCGTFFSTTDVVADGCERMVYAGSDFDPNPANGYRYLPRAG DRDARDSGQWGLALRWYAAELNDTEFGLYAMNYHSRNPYYSVIAGNGLATSDPVTGRS TGYYFIDYPEDIRLYGLSFQTNIGSTSVAGELSYRPNMPLQINSTDMSIAAIYPTTLF GNPIYDSGFATPRAGEVINGYVRKPVTQAQVTVTQFFDRVLAADRLTVVGEVGYNHLS GVDGDDLRYGRDAIYGIGELPNNALCTGALNVANPQECNSHGFYTRNSWGYRLRGILE YPNVFAGVNLKPNLAWSHDVEGYGPNFSEGAKAVSVGLDADYQNTYTASISYTDFFGG NYNPINDRDFLAVSFGVNF" misc_feature complement(3830901..3832580) /locus_tag="PA3422" /note="Protein of unknown function (DUF1302); Region: DUF1302; pfam06980" /db_xref="CDD:462059" gene 3832940..3833683 /locus_tag="PA3423" /db_xref="GeneID:878862" CDS 3832940..3833683 /locus_tag="PA3423" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252113.1" /db_xref="GeneID:878862" /translation="MRYHLSWKHRDIDAVMALYHPEVEYNDFFQNRRMRLADLREYVE ATMPKGPDESLEHTDRIRFDGDTAFIQYRLRVTLSGRLASFRASEAITVRDGLIWRIN EYASLVHESGGGAQAGGDGRPPASRLGLSAKQLSLLARDLEHYFQQAQPYLDPDLDLT QVANATGYTRNQISYLLNQVLGLSFYQYVNQTRLQHLLGQLSGELPGRVDELAFAAGF NSLSAFYRCFRQHTGQSPREYLKRLSSRR" misc_feature 3832940..3833680 /locus_tag="PA3423" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" misc_feature 3833423..3833665 /locus_tag="PA3423" /note="Helix-turn-helix domain; Region: HTH_18; pfam12833" /db_xref="CDD:432818" gene 3833774..3835180 /locus_tag="PA3424" /db_xref="GeneID:878863" CDS 3833774..3835180 /locus_tag="PA3424" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252114.1" /db_xref="GeneID:878863" /translation="MSAWRHLSLWMNQLDDPLEARPSLEESLEVDVAIVGAGYTGLWT AYYLKRRAPQLRVAIVEAETAGFGASGRNGGWLMGNLLGEDGLLAGLPPERRRAGYDL LHGIPDEVARVLQEEGIDCDYRKGGVLYCAARYPEQERRLRAYLHDLYAEGLDESDYR WLTPQELDQQLRIPGSYGAIHSPHCATIQPARLARGLARAVERLGVRLFEKSRVLHWQ RGLLRTERGELRAEWIVPAVEGYAASLPPLGHYQLPVQSLLVATEPLPSSVWAEIGLE RGQAFSEFSRQVTYGQRTADDRLAFGARGGYRFGGKLRSDFSLDDEEVGLRRYLFGEL FPLLKDARISHTWGGNLGMARRFRPHMLLDRASGIALSGGYGGEGVGASNLGGRTLAA LILGEDSELLRQPWVLGERPLDSLARWEPEPCRWLGYNAIIRSFVHEDRVLADPHSAP WRRSLAQTLAAGMESLMR" misc_feature 3833858..3834991 /locus_tag="PA3424" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" gene 3835215..3835559 /locus_tag="PA3425" /db_xref="GeneID:879086" CDS 3835215..3835559 /locus_tag="PA3425" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252115.1" /db_xref="GeneID:879086" /translation="MALTLLKNTAGADLGAASPVAVPLGEPVAQTRAYAVERTDQVET GIWECTPGRWRRQIVEQEFCHFLQGRCTFTPDGGETIRIEAGDALLLPENSLGVWDVQ ETVRKSYVIIHR" misc_feature 3835236..3835550 /locus_tag="PA3425" /note="Predicted enzyme of the cupin superfamily [General function prediction only]; Region: COG3450" /db_xref="CDD:442673" gene complement(3835579..3836349) /locus_tag="PA3426" /db_xref="GeneID:879087" CDS complement(3835579..3836349) /locus_tag="PA3426" /EC_number="4.2.1.17" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="NP_252116.1" /db_xref="GeneID:879087" /translation="MSVIVERNGPVTTLVIARPERRNAVDRPTAQALADALREFEADD TARVAVLTGSGGNFCAGADLAAVAEDGERRNRLEAEGDGPMGPSRMQLGKPLIAAIEG YAVAGGLELALLADLRVMAEDAICGVFCRRFGVPLIDGGSVRLPRIVGQGRALDLILT GRPVKADEALQIGLANRVVPSGSARAEAEELAAELAAFPQTCMLADRASVYAQWELSF DVALANEFQGGLAVIESGETLEGAQRFKDGEGRHGRFE" misc_feature complement(3835585..3836349) /locus_tag="PA3426" /note="crotonase/enoyl-CoA hydratase family protein; Region: PRK08259" /db_xref="CDD:236205" misc_feature complement(order(3835951..3835953,3835960..3835965, 3836029..3836037,3836041..3836043,3836158..3836172, 3836182..3836184,3836278..3836280,3836284..3836286)) /locus_tag="PA3426" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(3836029..3836031,3836164..3836166)) /locus_tag="PA3426" /note="oxyanion hole (OAH) forming residues [active]" /db_xref="CDD:119339" misc_feature complement(order(3835822..3835824,3835831..3835833, 3835864..3835866,3835873..3835878,3835882..3835887, 3835891..3835896,3835909..3835914,3835918..3835926, 3835930..3835932,3835948..3835959,3835993..3836004, 3836065..3836067,3836083..3836085)) /locus_tag="PA3426" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene complement(3836466..3837377) /locus_tag="PA3427" /db_xref="GeneID:878922" CDS complement(3836466..3837377) /locus_tag="PA3427" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_252117.1" /db_xref="GeneID:878922" /translation="MSDALRFDDQVVIVTGAGGGLGRAHALLFAKHGARVVVNDLGGS THGEGASASAADKVVAEIRAAGGTAVANHDSVTDGGRIVENALDAFGRVDVVVNNAGI LRDKTFHKMEDADWDLVYQVHVEGAYKVTRAAWPHLREQAYGRVVFTSSTSGIYGNFG QSNYGMAKLGLYGLTRTLALEGRKNNILVNAIAPTGGTRMTEGLIPPQVFEQLKPELV SPLVVYLGSSACEDTSGLYEVGGGWIGKVRWERSLGFGFDPKAGFDAEDVAAHWQQIC DFENAAHPADNVEALREMMANLQKHAL" misc_feature complement(3836616..3837365) /locus_tag="PA3427" /note="(3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs; Region: hydroxyacyl-CoA-like_DH_SDR_c-like; cd05353" /db_xref="CDD:187611" misc_feature complement(order(3836616..3836660,3836664..3836672, 3836682..3836684,3836703..3836711,3836715..3836720, 3836727..3836729,3836739..3836744,3836751..3836753, 3836820..3836822,3836826..3836831,3836835..3836840, 3836844..3836852,3836856..3836864,3836868..3836873, 3836880..3836885,3836892..3836894,3836898..3836924, 3836970..3836975,3836982..3836987,3836994..3836996, 3837003..3837008,3837018..3837020,3837027..3837032, 3837039..3837047,3837051..3837059,3837282..3837284, 3837363..3837365)) /locus_tag="PA3427" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187611" misc_feature complement(order(3836775..3836786,3836790..3836798, 3836874..3836876,3836886..3836888,3836925..3836933, 3837009..3837014,3837072..3837083,3837150..3837155, 3837249..3837251,3837255..3837263,3837315..3837323, 3837330..3837332)) /locus_tag="PA3427" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:187611" misc_feature complement(order(3836874..3836876,3836886..3836888, 3836925..3836927,3837009..3837011)) /locus_tag="PA3427" /note="active site" /db_xref="CDD:187611" gene complement(3837493..3837786) /locus_tag="PA3428" /db_xref="GeneID:878923" CDS complement(3837493..3837786) /locus_tag="PA3428" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252118.1" /db_xref="GeneID:878923" /translation="MHDPVSPLRAFDEGSWLFRQMVQAQPFIRQSGMVLAELGLLLAL GLGYLCWQEGSRWYAVGAGLALLGSLLLVVVRHNYDWWLFKLGPRGRLYIPFD" gene complement(3837885..3838781) /locus_tag="PA3429" /db_xref="GeneID:878948" CDS complement(3837885..3838781) /locus_tag="PA3429" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="epoxide hydrolase" /protein_id="NP_252119.1" /db_xref="GeneID:878948" /translation="MTAALPGIPLEAWRRRGRTLDFKGFPIRYWEAGQGRPLLLIHGF PSAAWDWHYLWEPLAQRYRVLVCDLLGFGDSAKPRAHRYSLLEQADLQQALLGRLGID EPLHVLAHDYGDSVAQELLARHHEGRLRLASCVFLNGGLFPETHRPVLSQKLLLSPLG GLFGRLFDRRALARNFAKVFGPRSQPGETELDAFWSLIESNQGQRVMHRLIRYIVDRR EQRERWVAALQHGGVPLRVIDGAVDPISGAHMVERYRQLVADADCVLLDGIGHYPQIE APAAVLEHYLAFRARLDDSEFS" misc_feature complement(3837906..3838730) /locus_tag="PA3429" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene complement(3838778..3839557) /locus_tag="PA3430" /db_xref="GeneID:878949" CDS complement(3838778..3839557) /locus_tag="PA3430" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldolase" /protein_id="NP_252120.1" /db_xref="GeneID:878949" /translation="MTAVHSLPADVQAQVSAAEWQTRVDLAACYRLVALHGWDDLIFT HISAKVPGTEDFLINPFGLMFHEITASSLVKVDASGKKLMDSPYEINPAGYTIHSAVH EVRHDVECVLHTHTAAGIAVSCQKQGLLPLSQQSLFVLSSLSYHAYEGVALNHEEKAR LQADLGASNFLILPNHGLLTCGGSIADTFLMMFTLQRACEVQVMAQSGGAELIHIPGQ ILAGARDMIAGVMRSKTGMGGQLAWPALLRKLDQQNPGYRQ" misc_feature complement(3838781..3839536) /locus_tag="PA3430" /note="aldolase II superfamily protein; Provisional; Region: PRK07044" /db_xref="CDD:235916" misc_feature complement(order(3838946..3838948,3838967..3838969, 3838979..3838981,3839000..3839002,3839033..3839035, 3839114..3839116,3839150..3839155,3839159..3839161, 3839183..3839191,3839204..3839209,3839213..3839215, 3839357..3839362,3839366..3839368,3839438..3839440, 3839462..3839464,3839474..3839476)) /locus_tag="PA3430" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:238232" misc_feature complement(order(3839030..3839032,3839213..3839215, 3839219..3839221,3839288..3839296,3839372..3839377, 3839423..3839425)) /locus_tag="PA3430" /note="active site" /db_xref="CDD:238232" misc_feature complement(order(3839030..3839032,3839213..3839215, 3839219..3839221)) /locus_tag="PA3430" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:238232" gene complement(3839686..3840372) /locus_tag="PA3431" /db_xref="GeneID:878983" CDS complement(3839686..3840372) /locus_tag="PA3431" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252121.1" /db_xref="GeneID:878983" /translation="MSLDKQALFWLAATVGGYLLSRQLYRRVKWYWLSPIVFVPVLLY ALAIPTHTRYADYARDTNWLVALLGPATVAFAIPIWQQRELLMRHWPALLAGMFAGTA VAIGSSWALAQALALDGQVTLSLLPRSITTPFAMEMSHDLGGVPELTAAFVMITGVFG AVIGGTLLRVLRLRTPLARGALFGVGAHGAGTSRAYEFGGEEGSAAGLLMVLTGLFNL LVAPLVAHCL" misc_feature complement(3839689..3840372) /locus_tag="PA3431" /note="Putative effector of murein hydrolase [Cell wall/membrane/envelope biogenesis]; Region: LrgB; COG1346" /db_xref="CDD:440957" gene complement(3840359..3840748) /locus_tag="PA3432" /db_xref="GeneID:878984" CDS complement(3840359..3840748) /locus_tag="PA3432" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252122.1" /db_xref="GeneID:878984" /translation="MLPPLVRRLSRLAAELAVLIAFWWAGGWLAKAIGLPLPGGVVGL AALLLLFASGLLRPAWLQAGAGLLLAEMLLFFIPALMSLLDYGALLRSEGWRILLVIM LSTLLVMLVTAVSVEWMCRWRARHESR" misc_feature complement(3840362..3840703) /locus_tag="PA3432" /note="Putative effector of murein hydrolase LrgA, UPF0299 family [General function prediction only]; Region: YohJ; COG1380" /db_xref="CDD:440990" protein_bind complement(3840589..3840601) /locus_tag="PA3432" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 3840844..3841737 /locus_tag="PA3433" /db_xref="GeneID:878899" CDS 3840844..3841737 /locus_tag="PA3433" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252123.1" /db_xref="GeneID:878899" /translation="MEFRQLRSFVEVVRQGSFTQAAQVRHASQSTISKQVAQLEQSLG VQVLERNGPHVRLTDAGAVVFRRAEEMLRLRRDLLSELDDLSQLNRGELRLGLPLLGA DALFAQRFAEYRRRYPNIAVHLVEGGSKTMEQAVLAGELELAGSLTPADDGFDYQPFC NEPLDVLLPAGHPKAAAASVALGELADSPFLLYQQSFTLNDRLLRACLEAGFSPREGG RSGQADFLGALVAANQGVVLLPRVIAREIERPGVVRVLLREPDLRWDIAFIWRRGGYL SRAAQAWLELLREQPLEESPA" misc_feature 3840853..>3841362 /locus_tag="PA3433" /note="LysR transcriptional regulator; Provisional; Region: rbcR; CHL00180" /db_xref="CDD:177082" misc_feature 3841117..3841704 /locus_tag="PA3433" /note="The C-terminal substrate binding domain of LysR-like transcriptional regulator CidR, contains the type 2 periplasmic binding fold; Region: PBP2_CidR; cd08438" /db_xref="CDD:176129" misc_feature order(3841162..3841167,3841171..3841176,3841183..3841185, 3841195..3841197,3841201..3841221,3841492..3841509, 3841525..3841530,3841534..3841539) /locus_tag="PA3433" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176129" gene complement(3842274..3843290) /locus_tag="PA3434" /db_xref="GeneID:878900" CDS complement(3842274..3843290) /locus_tag="PA3434" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_252124.1" /db_xref="GeneID:878900" /translation="MNLSRIGLDLAKQVFQVHGVDRHEHVVCRRQLKRAQVRDFFRQL PPCLVAMEACGSAHYWARELRELGHTVRLIAPQFVKPYVKGDKHDAHDAEAICEAASR PSMRYVPVKSAEQQAVQSMHRVRSRLVRARTALCNEVRGLLGEFGLIATRRGRAATMA LLETVMATEPAPLPAPMGELLRELKDELQTLEARIARLERQIQAHVRGDARIQRLLAV EGIGPISASAVAASAGDARQFRTGRQFAAWLGLVPRQHSTGGQQRLGNISKRGDTYLR TLLIHGARAVVRCCANKTDARSRWLQGLLQRRPANVVAVALANKNARILWALLSRETC YRPG" misc_feature complement(3842292..3843275) /locus_tag="PA3434" /note="IS110 family transposase; Region: transpos_IS110; NF033542" /db_xref="CDD:468073" gene complement(3843653..3844105) /locus_tag="PA3435" /db_xref="GeneID:879040" CDS complement(3843653..3844105) /locus_tag="PA3435" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="flavodoxin" /protein_id="NP_252125.1" /db_xref="GeneID:879040" /translation="MKVAILSGSVYGTAEEVARHAQKLLSAAGLEASHLPRASLDELK AFAPEAFLVVTSTTGMGELPDNLQPLYYAIRDQLPAWHGLPGGVIGLGDSSYGDTFCG GGEQVRELFGELGVREVLPMLRLDASETVTPETDAEPWLAEFAAALKG" misc_feature complement(3843656..3844105) /locus_tag="PA3435" /note="flavodoxin; Provisional; Region: PRK05723" /db_xref="CDD:168208" gene 3844385..3844942 /locus_tag="PA3436" /db_xref="GeneID:879041" CDS 3844385..3844942 /locus_tag="PA3436" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252126.1" /db_xref="GeneID:879041" /translation="MSTAPVTLLVARRVAAGRYRDFLAWQREGEALAADFPGYLGSGA LAPPAGGDEFQMIFRFADDATLAAWAHSASRQAWLERGQGLFDEPREHRAHGLAAWFD DNRKPPRWKQSVAIWLAFFPVSLAFNLGAGPYLGELSLAARVLLSTLVLTPLMTYWFI PLSSRLLAPWLHRRPQRAASLPEAH" misc_feature 3844388..3844912 /locus_tag="PA3436" /note="Antibiotic biosynthesis monooxygenase (ABM) superfamily enzyme [General function prediction only]; Region: COG3224" /db_xref="CDD:442457" gene 3845053..3845757 /gene="folM" /locus_tag="PA3437" /db_xref="GeneID:878764" CDS 3845053..3845757 /gene="folM" /locus_tag="PA3437" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_252127.1" /db_xref="GeneID:878764" /translation="MATAPILITGASQRVGLHCARRLLADGESVIVSYRSERPALDEL RQAGALTLHADFASEAGIFAFIGALRQHTDSLRAIVHNASDWVAETPGHEAEAFQQLF SVHMLAPYLINLHCAELLERSQPADIVHLTDDVARKGSARRIAYCASKAGLDNLTLSF AARFAPRIKVNAISPALVMFNDGDDAEYRARTLAKSALGIEPGPEVIYQSLRYLLDNP YVTGTTLTVNGGRHVK" misc_feature 3845059..3845754 /gene="folM" /locus_tag="PA3437" /note="dihydromonapterin reductase; Provisional; Region: PRK06483" /db_xref="CDD:180586" misc_feature order(3845080..3845082,3845086..3845091,3845095..3845097, 3845152..3845160,3845296..3845304,3845443..3845451, 3845488..3845490,3845500..3845502,3845575..3845586) /gene="folM" /locus_tag="PA3437" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature order(3845365..3845367,3845449..3845451,3845488..3845490, 3845500..3845502) /gene="folM" /locus_tag="PA3437" /note="active site" /db_xref="CDD:187535" gene 3845775..3846335 /gene="folE1" /locus_tag="PA3438" /db_xref="GeneID:878765" CDS 3845775..3846335 /gene="folE1" /locus_tag="PA3438" /EC_number="3.5.4.16" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase I" /protein_id="NP_252128.1" /db_xref="GeneID:878765" /translation="MNPALSQHYREILVGLGEDPQREGLLDTPKRAAKAMQYLCHGYG QTLEEIVNGALFASDNDEMVIVRDIELYSLCEHHLLPFIGKAHVAYIPTGKVLGLSKV ARIVDMFARRLQIQENLTRQIAEAVRQVTSAAGVAVVIEAQHMCMMMRGVEKQNSQMF TSVMLGAFRDSNTTRQEFLQLIGRSK" misc_feature 3845775..3846329 /gene="folE1" /locus_tag="PA3438" /note="GTP cyclohydrolase I; Reviewed; Region: PRK12606" /db_xref="CDD:237149" misc_feature order(3845784..3845789,3845796..3845798,3845808..3845810, 3845817..3845822,3845826..3845828,3845832..3845834, 3845838..3845840,3845844..3845852,3845856..3845861, 3845865..3845867,3845877..3845879,3845886..3845888, 3845901..3845903,3845934..3845936,3845940..3845942, 3845952..3845963,3845967..3845978,3845982..3845984, 3845988..3845990,3846000..3846005,3846012..3846017, 3846021..3846023,3846027..3846029,3846048..3846053, 3846057..3846059,3846069..3846077,3846084..3846086, 3846114..3846122,3846126..3846128,3846135..3846137, 3846165..3846167,3846204..3846212,3846219..3846224, 3846237..3846242,3846246..3846254,3846258..3846266, 3846279..3846284,3846291..3846293,3846297..3846305) /gene="folE1" /locus_tag="PA3438" /note="homodecamer interface [polypeptide binding]; other site" /db_xref="CDD:238349" misc_feature order(3845865..3845867,3845874..3845876,3845997..3845999, 3846003..3846008,3846063..3846065,3846069..3846074, 3846084..3846086,3846117..3846125,3846204..3846206, 3846210..3846212,3846222..3846224) /gene="folE1" /locus_tag="PA3438" /note="active site" /db_xref="CDD:238349" misc_feature order(3845997..3845999,3846003..3846008,3846204..3846206, 3846210..3846212) /gene="folE1" /locus_tag="PA3438" /note="putative catalytic site residues [active]" /db_xref="CDD:238349" misc_feature order(3845997..3845999,3846003..3846008,3846210..3846212) /gene="folE1" /locus_tag="PA3438" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:238349" misc_feature order(3846147..3846149,3846156..3846158,3846174..3846176, 3846180..3846182,3846267..3846275,3846279..3846293) /gene="folE1" /locus_tag="PA3438" /note="GTP-CH-I/GFRP interaction surface [active]" /db_xref="CDD:238349" gene 3846337..3846708 /gene="folX" /locus_tag="PA3439" /db_xref="GeneID:877686" CDS 3846337..3846708 /gene="folX" /locus_tag="PA3439" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase" /protein_id="NP_252129.1" /db_xref="GeneID:877686" /translation="MPRLEPGMARIRVKDLRLRTFIGIKEEEILNKQDVLINLTILYP AADAVEVNDIEHALNYRTITKAIIRHVEENRFALLERMTQEILDLVMENPAVRYAEVE VDKPHALRFAESVSITLAGHR" misc_feature 3846346..3846705 /gene="folX" /locus_tag="PA3439" /note="dihydroneopterin triphosphate 2'-epimerase; Region: folX; PRK11245" /db_xref="CDD:183053" misc_feature order(3846361..3846393,3846409..3846435,3846655..3846660, 3846667..3846693) /gene="folX" /locus_tag="PA3439" /note="homooctamer interface [polypeptide binding]; other site" /db_xref="CDD:238298" misc_feature order(3846403..3846411,3846418..3846420,3846565..3846576, 3846649..3846651,3846685..3846687) /gene="folX" /locus_tag="PA3439" /note="active site" /db_xref="CDD:238298" gene 3846837..3847148 /locus_tag="PA3440" /db_xref="GeneID:879138" CDS 3846837..3847148 /locus_tag="PA3440" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252130.1" /db_xref="GeneID:879138" /translation="MTAANLTEQQRLELEAAAFRTLVHHLQTRKDVQNIDLMNLAGFC RNCLSKWYKAAADDLGVEVSNDQAREEIYGMPYAEWKAKYQKEASPEQQAAFAKSQGN A" misc_feature 3846852..3847136 /locus_tag="PA3440" /note="Uncharacterized conserved protein, DUF1244 family [Function unknown]; Region: COG3492" /db_xref="CDD:442715" gene 3847200..3847538 /locus_tag="PA3440a" /db_xref="GeneID:17373373" CDS 3847200..3847538 /locus_tag="PA3440a" /codon_start=1 /transl_table=11 /product="type III effector protein" /protein_id="YP_008719767.1" /db_xref="GeneID:17373373" /translation="MTLTDFRARLRSEHHLFTDTLAFIAEHYSYTPSAFDNGSVSNPA GQNEGSCKTLGFAILEGLSLEETLLAFGEHYRAVRDNPEGDDHANIRALQQTGLAGVH FERQPLSRRG" misc_feature 3847206..3847523 /locus_tag="PA3440a" /note="HopJ type III effector protein; Region: HopJ; pfam08888" /db_xref="CDD:430288" gene complement(3847718..3847933) /locus_tag="PA3441" /db_xref="GeneID:879139" CDS complement(3847718..3847933) /locus_tag="PA3441" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="molybdopterin-binding protein" /protein_id="NP_252131.1" /db_xref="GeneID:879139" /translation="MTIKAINVRNQFKGTVKEIIEGPVLSEIDVQTAAGIVTSVITTR SVKELELAIGSEVIAFVKSTEVSIAKL" misc_feature complement(3847721..>3847921) /locus_tag="PA3441" /note="Molybdopterin-binding protein MopI [Coenzyme transport and metabolism]; Region: MopI; COG3585" /db_xref="CDD:442804" protein_bind 3847773..3847785 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(3847974..3848798) /locus_tag="PA3442" /db_xref="GeneID:879100" CDS complement(3847974..3848798) /locus_tag="PA3442" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aliphatic sulfonates ABC transporter ATP-binding subunit" /protein_id="NP_252132.1" /db_xref="GeneID:879100" /translation="MNAHNAALGGTPQRLKRGIPLALRGVARRFGEREVLKDIDLLVP AGQFVAIVGRSGCGKSTLLRLLAGLDQPSRGELLAGSAALAEAREDTRLMFQDSRLLP WKRVIDNVGLGLRGDWRAKALQALRAVGLAERANEWPAALSGGQKQRVALARALIHEP RLLLLDEPLGALDALTRIEMQQLIEGLWREHGFTVLLVTHDVSEAVAVADRVILIEDG EIGLDLPVELPRPRSRGSARLAALEAEVLNRVLAQPELPPQPEPVSPLPTQLRWAL" misc_feature complement(3847980..3848768) /locus_tag="PA3442" /note="aliphatic sulfonates transport ATP-binding subunit; Provisional; Region: ssuB; PRK11247" /db_xref="CDD:183055" misc_feature complement(3848619..3848642) /locus_tag="PA3442" /note="Walker A/P-loop; other site" /db_xref="CDD:213260" misc_feature complement(order(3848199..3848201,3848298..3848303, 3848511..3848513,3848616..3848624,3848628..3848633)) /locus_tag="PA3442" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:213260" misc_feature complement(3848511..3848522) /locus_tag="PA3442" /note="Q-loop/lid; other site" /db_xref="CDD:213260" misc_feature complement(3848346..3848375) /locus_tag="PA3442" /note="ABC transporter signature motif; other site" /db_xref="CDD:213260" misc_feature complement(3848298..3848315) /locus_tag="PA3442" /note="Walker B; other site" /db_xref="CDD:213260" misc_feature complement(3848280..3848291) /locus_tag="PA3442" /note="D-loop; other site" /db_xref="CDD:213260" misc_feature complement(3848193..3848213) /locus_tag="PA3442" /note="H-loop/switch region; other site" /db_xref="CDD:213260" gene complement(3848795..3849583) /locus_tag="PA3443" /db_xref="GeneID:879101" CDS complement(3848795..3849583) /locus_tag="PA3443" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_252133.1" /db_xref="GeneID:879101" /translation="MSISKRLAERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAV LEAGWALLRSGEIWQHLAISGWRAAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQM IRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSY GLSGFALFRQVILPGALPSILVGVRFALGFMWLTLIVAETISASSGIGYLAMNAREFL QTDVVVLAILLYAVLGKLADLAARGLERVWLRWHPAYQVKGGGA" misc_feature complement(3848810..3849574) /locus_tag="PA3443" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2; cl00427" /db_xref="CDD:444901" misc_feature complement(order(3848876..3848881,3848888..3848893, 3848900..3848905,3848909..3848914,3848921..3848926, 3848954..3848959,3848984..3848989,3848996..3849007, 3849026..3849028,3849035..3849040,3849080..3849082, 3849131..3849133,3849140..3849145,3849155..3849157, 3849161..3849166,3849173..3849175,3849179..3849181, 3849185..3849190,3849236..3849238,3849242..3849247, 3849254..3849283,3849287..3849298,3849323..3849325, 3849338..3849343,3849350..3849355)) /locus_tag="PA3443" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(order(3848990..3849007,3849236..3849280)) /locus_tag="PA3443" /note="conserved gate region [active]" /db_xref="CDD:119394" misc_feature complement(order(3848924..3848926,3848954..3848956, 3848963..3848965,3848987..3848989,3849236..3849238)) /locus_tag="PA3443" /note="putative PBP binding loops [active]" /db_xref="CDD:119394" misc_feature complement(order(3849059..3849061,3849071..3849076, 3849092..3849130)) /locus_tag="PA3443" /note="ABC-ATPase subunit interface [active]" /db_xref="CDD:119394" gene complement(3849604..3850752) /locus_tag="PA3444" /db_xref="GeneID:879163" CDS complement(3849604..3850752) /locus_tag="PA3444" /EC_number="1.14.14.5" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="alkanesulfonate monooxygenase" /protein_id="NP_252134.1" /db_xref="GeneID:879163" /translation="MSLEIFWFLPTHGDGHYLGTTQGARAVDHGYLQQIAQAADRLGF GGVLIPTGRSCEDSWLVAASLIPVTQRLKFLVALRPGIISPTVAARQAATLDRLSNGR ALFNLVTGGDPDELAGDGLHLSHAERYEASVEFTRIWRRVLEGETVDYAGKHIQVKGA KLLYPPLQQPRPPLYFGGSSEAAQDLAAEQVELYLTWGEPPAAVAEKIAQVREKAARQ GRQVRFGIRLHVIVRETSEEAWQAADRLIAHLDDDTIARAQASLARFDSVGQQRMAAL HGGSRDNLEVSPNLWAGVGLVRGGAGTALVGDGPTVAARVREYAELGIDTFIFSGYPH LEESYRVAELLFPHLDVQRPAQPEGRGYVSPFGEMVANDILPRQAAQS" misc_feature complement(3849610..3850746) /locus_tag="PA3444" /note="alkanesulfonate monooxygenase; Provisional; Region: PRK00719" /db_xref="CDD:234821" misc_feature complement(order(3850066..3850068,3850072..3850074, 3850168..3850170,3850210..3850215,3850369..3850371, 3850429..3850431,3850588..3850590,3850717..3850719, 3850729..3850731)) /locus_tag="PA3444" /note="active site" /db_xref="CDD:238527" misc_feature complement(order(3850261..3850266,3850270..3850281, 3850285..3850287,3850399..3850404,3850411..3850413, 3850462..3850464,3850471..3850473,3850480..3850485, 3850492..3850497,3850501..3850503,3850552..3850554, 3850561..3850566,3850573..3850575,3850582..3850599)) /locus_tag="PA3444" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238527" misc_feature complement(3850519..3850524) /locus_tag="PA3444" /note="non-prolyl cis peptide bond [active]" /db_xref="CDD:238527" misc_feature complement(order(3850018..3850035,3850054..3850065, 3850246..3850287,3850372..3850380,3850399..3850425)) /locus_tag="PA3444" /note="insertion regions; other site" /db_xref="CDD:238527" gene complement(3850830..3851801) /locus_tag="PA3445" /db_xref="GeneID:879164" CDS complement(3850830..3851801) /locus_tag="PA3445" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252135.1" /db_xref="GeneID:879164" /translation="MRTIALRRGLAALLVAALSYGVQADEKSANTLRIGYQKYGTLVL LKARGTLEKRLAEDGVKVQWTEFPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADL LYVAYEPPAPTSEAILLPKDSPIRSVAELKGRKVALNKGSNVHYLLVRALEQAGLKYS DIQPVYLPPADARAAFERHSVDAWVIWDPYQAAAEKQLSARVLVDGRELVDNHQFYLA TRTYAQRHPQVLDKLVDEIREVGDWSRANPQQVTEQVAPLLGLPADITLTAVKRQGYG AQLITPAVVEAQQKIADTFTQLKLIPKPLSIKDVIWTPPAGKVASAP" misc_feature complement(3850887..3851711) /locus_tag="PA3445" /note="Substrate binding domain of sulfonate binding protein, a member of the type 2 periplasmic binding fold superfamily; Region: PBP2_SsuA; cd13557" /db_xref="CDD:270275" misc_feature complement(order(3851160..3851162,3851232..3851234, 3851241..3851246,3851370..3851372,3851385..3851387, 3851457..3851459,3851592..3851594,3851688..3851690)) /locus_tag="PA3445" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270275" gene complement(3851920..3852513) /locus_tag="PA3446" /db_xref="GeneID:879615" CDS complement(3851920..3852513) /locus_tag="PA3446" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="NAD(P)H-dependent FMN reductase" /protein_id="NP_252136.1" /db_xref="GeneID:879615" /translation="MLVVSIAGSPSVRSRSGVLLERARDWLSRRGVEVASHQVLDFPA EDLLRARLDSPPVLALAEQIGRADGLLVATPVYKASFSGALKVLLDLLPERALEHKVV LPFATGGSSAHMLAVDYALKPVLAALKAQEVLHGVFAVDKQIAYATESDPARLEPVLE QRLENALETFHLALSRRPQPIDPQLLNERLVNARWSI" misc_feature complement(3851935..3852513) /locus_tag="PA3446" /note="NAD(P)H-dependent FMN reductase; Provisional; Region: PRK10569" /db_xref="CDD:182557" gene complement(3852667..3853416) /locus_tag="PA3447" /db_xref="GeneID:879616" CDS complement(3852667..3853416) /locus_tag="PA3447" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_252137.1" /db_xref="GeneID:879616" /translation="MSGLLDLLEIRKAYGDTRVLEGVALSLAPGEVVSLLGPSGCGKS TLLRIAAGLDDDFQGTVERNPILGFGPDGENGRSGGIGVVFQEPRLLPWLTVAQNVGF ADGWLEDEHWVERLLADVGLAGCGGLLPKQLSGGMAQRAAIARGLYGRPQVLLLDEPF SAVDAFTRMRLQDLLQDVVQNYEISVLLVTHDLDEAFYLADRVLLMGGRPGHIRREFH VPLARPRDRRAVELAYLRGEALTEMQRAHVL" misc_feature complement(3852676..3853416) /locus_tag="PA3447" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]; Region: TauB; COG1116" /db_xref="CDD:440733" gene complement(3853413..3854237) /locus_tag="PA3448" /db_xref="GeneID:879113" CDS complement(3853413..3854237) /locus_tag="PA3448" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_252138.1" /db_xref="GeneID:879113" /translation="MVSQSLRLARRVSRRAWRLRVPGAWRAWALPLLALSSWEALVRL GWLPAYQMPAPSGILLTLVELARGELWGHVGASLARVAAGFAIGSGLALVVGTWVGLS RRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDETPKIVLIALGAFFPVYLALVAGVR GVDRKWVELGRLYRLSRFALVRRILLPAALPNLFTGLRGALSLSWMFLVAAELIAATQ GLGYLLSDGRETSRPDLVIAAILVLAALGKLSDGLLRSLERRALRWRDSFDGEGGA" misc_feature complement(3853443..3854198) /locus_tag="PA3448" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]; Region: TauC; COG0600" /db_xref="CDD:440365" gene complement(3854241..3855242) /locus_tag="PA3449" /db_xref="GeneID:879114" CDS complement(3854241..3855242) /locus_tag="PA3449" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252139.1" /db_xref="GeneID:879114" /translation="MIAALRRCRAWLALLAVLAVFPAAEAAAPAEIRLDYAYYAPTSL ALRKFGWLEKSLDGSGTRVRWVFSQGSNRSLEYLNAGSVDFASTAGLAAVLARANGSP VRTVYVASRPEWTALLVRKDSPIRSLAELKGRKVAATKGTDPYLFLLRSLHSVGLDKN DLRIVHLQHPDGRVALEKGQVDAWAGLDPHMAASELQAGSRLLYRNLGFNSYGVLNVR EDFAERHPQLIRQVLAAYEQARHWVIGHPDEAAQLLAEEAGLPLEVARLQLSRTDFSQ PLPGAEQVAALKAAAPILADERLVRPGVDVQKVVDELIAPQWAAEVVGGVPLARTEP" misc_feature complement(3854358..3855149) /locus_tag="PA3449" /note="Substrate binding domain of putative sulfonate binding protein, a member of the type 2 periplasmic binding fold superfamily; Region: PBP2_SsuA_like_1; cd13556" /db_xref="CDD:270274" misc_feature complement(order(3854604..3854606,3854673..3854675, 3854682..3854687,3854811..3854813,3854826..3854828, 3854898..3854900,3855030..3855032,3855129..3855131)) /locus_tag="PA3449" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270274" gene complement(3855493..3856131) /locus_tag="PA3450" /db_xref="GeneID:877870" CDS complement(3855493..3856131) /locus_tag="PA3450" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="antioxidant protein" /protein_id="NP_252140.1" /db_xref="GeneID:877870" /translation="MSLRLGDIAPDFEQDSSEGRIRLHEWLGDSWGVLFSHPADFTPV CTTELGFTAKLKDQFAQRGVKVLALSVDPVESHLKWIDDINETQDTRVNFPIIADADR KVSELYDLIHPNANDTLTVRSLFIIDPSKKVRLIITYPASTGRNFNEILRVIDSLQLT DEHKVATPANWEDGDEVVIVPSLKDEEEIKRRFPKGYRAVKPYLRLTPQPNR" misc_feature complement(3855508..3856119) /locus_tag="PA3450" /note="Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by...; Region: PRX_1cys; cd03016" /db_xref="CDD:239314" misc_feature complement(order(3855514..3855516,3855523..3855525, 3855622..3855627,3855631..3855636,3855661..3855666, 3855676..3855678,3855685..3855687,3855691..3855708, 3855712..3855720,3855724..3855732,3855772..3855774, 3855805..3855807,3855874..3855876,3855883..3855885, 3855979..3855981,3855988..3855996,3856003..3856005, 3856117..3856119)) /locus_tag="PA3450" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:239314" misc_feature complement(order(3855529..3855531,3855586..3855588, 3855775..3855780,3855799..3855801,3855829..3855834, 3855859..3855861,3855886..3855891,3855895..3855900, 3855904..3855909,3855913..3855921,3856081..3856083)) /locus_tag="PA3450" /note="decamer (pentamer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:239314" misc_feature complement(order(3855766..3855768,3855997..3855999, 3856006..3856008)) /locus_tag="PA3450" /note="catalytic triad [active]" /db_xref="CDD:239314" gene 3856337..3856546 /locus_tag="PA3451" /db_xref="GeneID:877871" CDS 3856337..3856546 /locus_tag="PA3451" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252141.1" /db_xref="GeneID:877871" /translation="MLGKRSTDPTPATRFRSDRISSVNGQYFFSTREGTLEGPYFTRF DAEREIDAYIRRMRQSAEIHAPGSR" misc_feature 3856349..3856513 /locus_tag="PA3451" /note="Domain of unknown function (DUF6316); Region: DUF6316; pfam19837" /db_xref="CDD:466202" gene 3856749..3858320 /gene="mqoA" /locus_tag="PA3452" /db_xref="GeneID:879029" CDS 3856749..3858320 /gene="mqoA" /locus_tag="PA3452" /EC_number="1.1.5.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="malate:quinone oxidoreductase" /protein_id="NP_252142.1" /db_xref="GeneID:879029" /translation="MKKILLMLLCVSVLGCSKNSVESEKPVDVLLIGGGIMSATLGTY LNELEPGWTIEMVERLDKVAEESSNGWNNAGTGHSAFCELNYTSEAADGSMDISKAVA INENFEISKQFWAYQVDRKVLNDPKSFINNVPHMSFVWGDDNVAFLKKRHAALQHSSL FRGMEYSEDPEQIKQWVPLVMEGREPGQKIAATRMSIGTDVNFGEITRQLVGSLSAKD TFKLRLQHEVRDLKRNDDNTWTVTMADLANGDKETSVKARFVFIGAGGGALKLLQMSG IPEAEGYAGFPVGGSFLATTNPDVVKRHLAKVYGKASVGSPPMSVPHLDTRMIDGKPV LLFGPFATFSTKFLKNGSLWDLPGSVTSGNIGPMFNAGIDNFDLSQYLIGQLMLSQDD RMASLREYFPEARDEDWKLVQAGQRVQIIKKDAEKGGVLQFGTEVVTAADGSVAALLG ASPGASTAAPIMLSVLEKAFKDKVATPEWQARLKEIVPSYGRKLNNDIELTNSTRAWS SERLQLIHVPVQPEA" misc_feature 3856812..3858296 /gene="mqoA" /locus_tag="PA3452" /note="malate:quinone oxidoreductase; Validated; Region: PRK05257" /db_xref="CDD:179979" gene complement(3858544..3859209) /locus_tag="PA3453" /db_xref="GeneID:879030" CDS complement(3858544..3859209) /locus_tag="PA3453" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252143.1" /db_xref="GeneID:879030" /translation="MSTEPNSPFVDDPLSAVDARILGSLVEKQATTPETYPLTLNALV LACNQKTSRDPVMNLTPGQVGQSLRQLEGRGLVRLVMGSRADRWEHTLGKGLELVAPQ VALLGLLFLRGPQTLNELLTRSNRLHDFDDVEQIRHHLERLAGRGLAVHLERRAGQRE ERYMHLLGSQADLEAAVEAMGSDPERAAPAALSADAEARIAELETRLAALEERLARLE GGA" misc_feature complement(3858556..3859173) /locus_tag="PA3453" /note="Uncharacterized conserved protein YceH, UPF0502 family [Function unknown]; Region: YceH; COG3132" /db_xref="CDD:442366" gene complement(3859338..3860522) /locus_tag="PA3454" /db_xref="GeneID:878852" CDS complement(3859338..3860522) /locus_tag="PA3454" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA thiolase" /protein_id="NP_252144.1" /db_xref="GeneID:878852" /translation="MREVVIVDSVRTGLAKSFRGKFNLTRPDDMAAHCVDALLARNDL DPLLVDDCIVGAGSNEGAQGHNIGRNVAVLSGLGIQVPGMTLNRYCSSGLQAIAIAAN QIASGCSEVIVAGGVESITLTLKSVNTDHLVNPLLQREVPGIYYPMGQTAEIVARRYG ITREAQDAYALQSQQRMARAQADGLFADEIVPMTTRYAVEDKASGEKQVLDGVVDRDD CNRPDTTLEGLASLKPAFAEDGSVTAGNASQLSDGASMTLLMSLEKALALGLEPKAFF RGFTVAGCEPDEMGIGPVFSVPKLLKAKGLKIADVDLWELNEAFASQCLYCRDRLEID NEKYNVNGGSIAIGHPFGMTGSRQVGHLVRELHRRNLRYGVVTMCVGGGMGASGLFEA VR" misc_feature complement(3859344..3860522) /locus_tag="PA3454" /note="Acetyl-CoA acetyltransferase [Lipid transport and metabolism]; Region: PaaJ; COG0183" /db_xref="CDD:439953" gene complement(3860675..3862165) /locus_tag="PA3455" /db_xref="GeneID:878853" CDS complement(3860675..3862165) /locus_tag="PA3455" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252145.1" /db_xref="GeneID:878853" /translation="MFESAEVGHSIDKDTYEKAVIELREALLEAQFELKQQARFPVII LINGIEGAGKGETVKLLNEWMDPRLIEVQSFLRPSDEELERPPQWRFWRRLPPKGRTG IFFGNWYSQMLYARVEGHIKEAKLDQAIDAAERFERMLCDEGALLFKFWFHLSKKQLK ERLKALEKDPQHSWKLSPLDWKQSEVYDRFVHYGERVLRRTSRDYAPWYVVEGADERY RALTVGRILLEGLQAALATKERAKRQPHAAPLVSSLDNRGLLDSLDLGQYLDKDAYKE QLAAEQARLAGLIRDKRFRQHSLVAVFEGNDAAGKGGAIRRVTDALDPRQYHIVPIAA PTEEERAQPYLWRFWRHIPARRQFTIFDRSWYGRVLVERIEGFCAPADWLRAYGEIND FEEQLSEYGIIVVKFWLAIDKQTQMERFKEREKTPYKRYKITEEDWRNRDKWDQYVDA VGDMVDRTSTEIAPWTLVEANDKRFARVKVLRTINDAIEAAYKKDK" misc_feature complement(3860690..3862162) /locus_tag="PA3455" /note="polyphosphate:AMP phosphotransferase; Region: poly_P_AMP_trns; TIGR03708" /db_xref="CDD:274736" gene 3862309..3864273 /locus_tag="PA3456" /db_xref="GeneID:877843" CDS 3862309..3864273 /locus_tag="PA3456" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC" /protein_id="NP_252146.1" /db_xref="GeneID:877843" /translation="MSDFQHAQLDWDENGQPLSRAFGDVYFSRHSGLNETRHVFLATN RLAERFAALGDGEVLCIGETGFGTGLNFLCAWQLFERVAPAGARLEFVSVEKFPLAAA DLRRALALWPELAPWSEALLGQYLAVHPGFQRLAFAGGRVGLTLLLGDALECLPQLDA RVDAWFLDGFAPAKNPDMWSPVLFAELARLSAPQATLGTFTSAGFVRRGLVEAGFAMQ RVPGYGQKREMLSGTYQGPPANAGKPWYARPAPHAGRRAALVVGGGLAGCASAASLAA RGWQVTLIERHPGLAREASGNPQGVLYLKLSAHGTPLSRLVLSGFGHTRRLLERLRRG HDWDACGVLQLAFDAKEAQRQAQLAAAFPADLLHGLEREQAERLAGVALPAGGLFYPE AGWVHPPALCQALAATPGITLLSGRAVRLRREGDDWCAYAGDECLARAPLAILATAAD IRDFPPAAELPLKRIRGQVTRLPATPQSRALRTVVCAEGYVAPPRGDEHTLGASFDFK SEDLAPTLAEHQGNLELLREISPDLLQRLGADDLPLERLEGRAAFRCTSPDYLPLVGP LAERAAFDEAYAVLARDARQVPERACPWLPGLYLNSGHGSRGLISAPLSGELLAAWIC GEPLPLPRAVAEACHPNRFLLRDLVRGQRG" misc_feature 3862309..3864270 /locus_tag="PA3456" /note="bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC; Region: mnmC; PRK01747" /db_xref="CDD:234978" gene 3864374..3865126 /locus_tag="PA3457" /db_xref="GeneID:877844" CDS 3864374..3865126 /locus_tag="PA3457" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252147.1" /db_xref="GeneID:877844" /translation="MDVLLFESLGIGAILGLLLGLTGAGGSLVALPLLLSLHLPLRDA IGVSLGAVALSALIGAIPRARQGQVAWRPVLVLALAGLPSNAVGQWLGRFVPEGVLIV AFCLLVLWSAWRMWRGAGMKREASDQARSLPLLGIGLAVGLLSGLMGVGGGFLVVPGL LWFTPLSMMAATATSMAVIALVSGGGFLIYLTGAHPPLPLLGGLAAGGAVGVLGGNLL AQRLGGPTLQRLFALMLVAVSFSLAAQKLYGG" misc_feature 3864503..3865114 /locus_tag="PA3457" /note="Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family [Inorganic ion transport and metabolism]; Region: TauE; COG0730" /db_xref="CDD:440494" gene complement(3865281..3865754) /locus_tag="PA3458" /db_xref="GeneID:879710" CDS complement(3865281..3865754) /locus_tag="PA3458" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252148.1" /db_xref="GeneID:879710" /translation="MVESNKTAADTYSLAIFRAIRRLQQAAEIHSKRLSRYGGLTPLQ LLILHVLAVEGELTATQLAKLVSLSQASLSGVLDRLEGRGLLYRRRDEQDRRKSWLHL DPAGHEALAEAPPLLPEYVIERFAALPEWERHGLLAALLRAADLFGLPEEDVEEE" misc_feature complement(3865356..3865754) /locus_tag="PA3458" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" gene 3865897..3867666 /locus_tag="PA3459" /db_xref="GeneID:879711" CDS 3865897..3867666 /locus_tag="PA3459" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutamine amidotransferase" /protein_id="NP_252149.1" /db_xref="GeneID:879711" /translation="MCGISGEFRFDNQAADLAAVERITHHLAPRGPDAWGFHAQGPIA LGHRRLKIMDLAEASGQPMIDPDLGLAMVFNGAIYNYPELRGELESLGYRFFSGGDTE VLLKGYHAWGADLLPRLNGMFAFAVWERDRQRLFLARDRLGIKPLYYSLDRSRLRFAS SLPALLKGGDIASDLDPQALNFYLNFHAVVPAPHTLLEGVKKLPPATWMSVDLDGSCE QRTWWTLDYGPRPDERELTLDDWQERVLDGLREAVAIRQRAAREVGVLLSGGVDSSLL VGLLHEAGVDNLLTFSIGFEDAGGERGDEFQYSDLIAERYHTRHHRLRIGEHEVIEQL PAAFRAMSEPMVSHDCIAFYLLAREVSKHCKVVQSGQGADELFAGYHWYPKVDGADDA FAAYRAAFFDRDHEEYLATVGERFRVEDVAGRFVRDHFASPGAEAAVDKALRLDSTIM LVDDPVKRVDNMTMAWGLEARVPFLDYRLAELSARIPARFKLGDGGKQVLKGAARKVI PSEVIDRPKGYFPVPGLKHLQGRTREWVRELLLDPSQDRGLFQPAIFDRLLSDPDGDL TPLRGSKLWQLAALNLWLSEQGL" misc_feature 3865897..3867657 /locus_tag="PA3459" /note="asparagine synthase family amidotransferase; Region: trio_amidotrans; TIGR03104" /db_xref="CDD:274430" gene 3867707..3869464 /locus_tag="PA3460" /db_xref="GeneID:877868" CDS 3867707..3869464 /locus_tag="PA3460" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_252150.1" /db_xref="GeneID:877868" /translation="MKGHLHLPHPHNQRLQRIQAPTYERLQARLAEDHSEPTEKPLSI HCGWGRLLIGQTYPDAEELARDLLQEAPGERDIALYVAAPQQVLAHAPQQLFLDPSDT LRLWFTDYRPARRPPRGFRIRRVHTEEDWAAINRLYLARGMLPVQTERLSPRHQGGPI YWLAEDADTGVAVGTVMGLNHAKAFQDPEGGSSLWCLAVDPQCSRPGVGEALVRHLVE HFMSRELAYLDLSVLHNNQQAKALYRKLGFRELATFTIKRKNGINQSLFLGPGPEEDL NPYARIIVDEAHRRGIEVRVDDAEGGLFTLTQGGRQIRCRESLSDLTTAVSMTLCQDK VLTHRALQHAGLRQPQQRLAGSAEENAAFLAEHGSLVVKPVDGEQGQGVAVDLRTAEE VEEAIEAARHFDSRVLLESYHAGHDLRVLVIGYEVVAAAIRRPAAVIGDGRHSIRELI EAQSRRRQAATGGESRIPLDHETERTLRAAGYGYDDVLPSGEHLAVRRTANLHTGGIL EDVTDALHPALREAAIQAARALEIPVVGLDFLVEAADQPDYVIIEANERAGLANHEPQ PTAERFVDLLFPLSREVPS" misc_feature 3867824..3869449 /locus_tag="PA3460" /note="GNAT-family acetyltransferase TIGR03103; Region: trio_acet_GNAT" /db_xref="CDD:132147" gene 3869461..3870657 /locus_tag="PA3461" /db_xref="GeneID:877869" CDS 3869461..3870657 /locus_tag="PA3461" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252151.1" /db_xref="GeneID:877869" /translation="MTPLPQPDLNYLQRVLLEMLAIPSPTGFTDTIVRYVAEQLDELG VPFEMTRRGTIRATLQGRLNTPDRAVSAHLDTIGALVREIKPNGRLGLAPVGCWSSRF AEGSRVTVFTEQGVFRGSVLPLLASGHAFNTEVDNLKISWDNIELRLDAYTASRADSE SLGISVGDYVAFDPLPEFTESGHISARHLDDKAGVAALLAALKAVKESGQEPPIDCHP LFTITEEVGSGAAGALPWDVSEFVGIDIAPVAEGQNSNEHSVSVAMQDSGGPYDFHLS RHLLRLGERHDIALRRDLFRYYHSDAQSAIAAGHDTRAALLAFGCDATHGYERTHIDS LAALSRLLTAYILSPPVFASDAKPRETSLERFNKQLEHPVHMESCTHVPPVDEVLDSS NNSDKG" misc_feature 3869482..3870510 /locus_tag="PA3461" /note="Zinc peptidases M18, M20, M28, and M42; Region: Zinc_peptidase_like; cl14876" /db_xref="CDD:472712" misc_feature order(3869536..3869544,3869557..3869559,3869569..3869571, 3869605..3869610,3869617..3869619,3869698..3869706, 3869737..3869739,3869773..3869781,3869809..3869814, 3869818..3869820,3869896..3869898,3869902..3869910, 3869956..3869961,3869989..3869991,3869995..3869997, 3870007..3870009,3870013..3870015,3870145..3870147, 3870154..3870159,3870226..3870234,3870250..3870252, 3870298..3870300,3870340..3870342,3870376..3870378, 3870424..3870429,3870436..3870438,3870445..3870447) /locus_tag="PA3461" /note="putative oligomer interface [polypeptide binding]; other site" /db_xref="CDD:349907" misc_feature order(3869677..3869679,3870028..3870030,3870130..3870135, 3870142..3870144,3870193..3870204,3870343..3870345, 3870352..3870357,3870430..3870435) /locus_tag="PA3461" /note="putative active site [active]" /db_xref="CDD:349907" protein_bind complement(3869831..3869843) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 3870795..3873554 /locus_tag="PA3462" /db_xref="GeneID:877734" CDS 3870795..3873554 /locus_tag="PA3462" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sensor/response regulator hybrid protein" /protein_id="NP_252152.1" /db_xref="GeneID:877734" /translation="MSRLCLVLLLLCCALPARAQPPAPLDGEDLRLSLGAYAEYYRDA GGKARLGDILALPAQAFAALRGDHANFGKNAAAWWFRVRLDNRNGADLAGFLEVNYPL LDDLKVYLLTADGRIEQQESGDLFAFSQRPVQVRNFWFPLRLPPGESTLLLRVQSTST VYLPLYFSTYAASAASQETLMGFNGAFYGVLFGLFCYNLFLFVSLREATYAWYLLYNL SLGLFSASFDGLLFKLLPGHVALESAGIYLLMYLSCLVSIQFSRGYLYTRRDFPRLDR FLRGLLLACVVLLASEPLVGLRAWNVLASLTVMLVSLSLLLAGVHVWRQGLRYGLYYI LAWGALLLSFLVTTAASLGFELFGLFGSSVVKIGMTVELVTLSIGLADRINALKEEGF RSRQAAEQARVENEAKSRFLAKMSHEIRTPLNGVLGMLQLLRDTPLDRGQAAYVETIA SSGSALMSVINDILDYARIESGKLHLERIDFDLEELLSDTLALFSAQAVEKRLHLHLG LDRGVPRRLNGDPTRLRQVLMNLLSNALKFTAEGHVAVRVQRRFDEGGRERLLYSVSD SGIGISAQAQKTLFESFSQADSSTTRRYGGSGLGLAISRELVQMMGGRIEVSSEPGKG TRFSVDLPLSPALDAGEADELAQLLQHRPALLASEDNLTLDCLQALLERWGLRVERCL QPRRLNAYLEDFSAPPLLVLAAPWPGPPSIWLDTLYAQLEQGQRILLLCPPQHCQDLP PHEGLRLLALAQPVAVKALREALLELYRERRRQPGRSSEAAPDERPPDAPCILVAEDN PVNQLVVRGFLAKRGYAVRLAGNGRLALDEYLRDPNGIQLILMDGEMPEMDGFEATRL IRREERAQGWPRVPIVALTAHILDEHRRAGIEAGMDAYLGKPVDRAELYATLERLLGQ PSRQA" misc_feature 3870909..3871286 /locus_tag="PA3462" /note="7TMR-DISM extracellular 2; Region: 7TMR-DISMED2; pfam07696" /db_xref="CDD:429601" misc_feature 3871341..3871943 /locus_tag="PA3462" /note="7TM diverse intracellular signalling; Region: 7TMR-DISM_7TM; pfam07695" /db_xref="CDD:429600" misc_feature <3871977..3873524 /locus_tag="PA3462" /note="hybrid sensory histidine kinase BarA; Provisional; Region: PRK11107" /db_xref="CDD:236848" gene 3873606..3873836 /locus_tag="PA3463" /db_xref="GeneID:877735" CDS 3873606..3873836 /locus_tag="PA3463" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252153.1" /db_xref="GeneID:877735" /translation="MLIPHDLLEADTLNNLLEDFVTREGTDNGDETPLDVRVERARHA LRRGEAVILFDPESQQCQLMLRSEVPAELLRD" misc_feature 3873606..3873830 /locus_tag="PA3463" /note="hypothetical protein; Provisional; Region: PRK00304" /db_xref="CDD:166901" gene complement(3874654..3875979) /locus_tag="PA3464" /db_xref="GeneID:877841" CDS complement(3874654..3875979) /locus_tag="PA3464" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252154.1" /db_xref="GeneID:877841" /translation="MKLLLRCLLLGAWVVSPSLWAWSNHTVGSYLALRELAAIREAPE VEVEPLEAFLAAERGGLAALLDEQEAYARAHIGNYPARPDALRFAAEGEAGDLRQAFL AALRVNPEIRLALALQPLPGQDQPQRPHLKPQEVLVFQNLSPWTAWRFIRLEPGERVA PLAVLATAADEPDYGHDINLFSDNPGEAGQRYGFGTQPFGDPRFEFSSQAPFHMGFYH EAAVIYSGAPFLARAWPEWRAYQYFGLSRFAFANGHPYWGYRFLGWGMHYIQDITQPY HSTPLPGASLAAMLQMEGKALLGYPEEKQAAIERVANRHTAVEKYQFDWLRQLLRDGR PQPMLDAYADTRRDGAYPAYSPTYLRDVVAAESNAHAAAFDAAIGEWLAARPASAAQD FSESNQPRPEAHDNAVLNAQLIELIGHFGAHSRNIARAALETEEGGAKE" misc_feature complement(<3875134..>3875268) /locus_tag="PA3464" /note="Zinc dependent phospholipase C/S1-P1 nuclease; Region: ZnPC_S1P1; cl16915" /db_xref="CDD:450122" gene 3876196..3877911 /locus_tag="PA3465" /db_xref="GeneID:877842" CDS 3876196..3877911 /locus_tag="PA3465" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252155.1" /db_xref="GeneID:877842" /translation="MLQSVSPKHDLPLKPEGQAAKPERTGTWAPFSIQAFRIIWICNL FANLGTWAQSVAAAWVVTDAHASPLMVAMIQVAAALPLVLLSILSGVIADNHDRRKIM LWGLSFEMTGAMFATLLAFLGYLDPVLLIISILWISLGGSVTIPAWQAAVNEQVPARM VSDAVLLNSVNYNVARAAGPALGGLLLSAVGPAWVFLFNSFCYMALIWAIWQWRRDVP KRSLPPEGILEGVTAALRFTQYSTVTRLVMMRSFAFGLSASAVWALLPLLAHRNPDGD AAIYGYMLGALGLGAILGSTQVSRLRQRIGSSRLISLAGFTLALILLTLGLVDNLWVL FPVLILGGGCWIGALATYNSAVQILVPDWIKARALALYQTALYGGLALGSFLWGHLAE TMTVHGALLAAGCLLLASVILLYNSRLPEMDAASISRAPASMPGQPSFVFNTRRGMVL VSIEYRIPAERTRDFVRAAQPLRRLRLRNGAERWSLFRDVSNPEVWQELFLVDNWIQH LRMLDRMTLADKIVIDNVTALHAGDGPPQIRHCVSYEASSYDTPLVKSATPPANDEAG ATAGS" misc_feature 3876268..3877836 /locus_tag="PA3465" /note="Transmembrane secretion effector; Region: MFS_3; pfam05977" /db_xref="CDD:399164" misc_feature order(3876331..3876336,3876343..3876348,3876355..3876357, 3876451..3876453,3876616..3876621,3876625..3876633, 3876640..3876642,3876700..3876702,3876709..3876714, 3876721..3876723,3876946..3876948,3876955..3876960, 3876967..3876975,3876982..3876984,3877054..3877056, 3877066..3877068,3877225..3877230,3877240..3877242, 3877252..3877254,3877300..3877302,3877309..3877314, 3877321..3877326,3877333..3877335) /locus_tag="PA3465" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340863" gene complement(3878033..3879373) /locus_tag="PA3466" /db_xref="GeneID:877976" CDS complement(3878033..3879373) /locus_tag="PA3466" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase" /protein_id="NP_252156.1" /db_xref="GeneID:877976" /translation="MPRSPLFSQFPLHERLLKALESLSFSEPTPVQAAAIPKALEGHD LRVTAQTGSGKTAAFLLPLLHRLLAEDKPRSLARALILLPTRELAQQTLKEVERFAQF TFIKACLITGGEDFKVQGARLRKNPEIIIGTPGRLLEQRNAGNLPLQDIEVLVLDEAD RMLDMGFADDVLALANACPAERQTLLFSATHSGAGLNKVIAEVLREPQVLRLNQVGEL NENVRQQVITADDVAHKEQLLQWLLSNETYTKAIVFTNTRVSADRLTGRLIANQHKVF VLHGEKDQKDRKLAIERLKQGAVKILVATDVAARGLDVEGLDLVINFDMPRSGDEYVH RIGRTGRAGAEGLAISLICHGDWNLMSSVERYLKQNFERRNIKELKAAYQGPKKLKAS GKAAGSKKKKQDRKGAAAKPAAKRKPAARPKAGPSAVVSADGMAPLKRKKPTAE" misc_feature complement(3878210..3879355) /locus_tag="PA3466" /note="Superfamily II DNA and RNA helicase [Replication, recombination and repair]; Region: SrmB; COG0513" /db_xref="CDD:440279" gene 3879559..3880926 /locus_tag="PA3467" /db_xref="GeneID:877977" CDS 3879559..3880926 /locus_tag="PA3467" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_252157.1" /db_xref="GeneID:877977" /translation="MPDAPASAAERLERLPLSPYHRLVFVIIALAFFFDSMDLAMMTF LLGSIKAEFGLDSAQAGLLASSSFFGMVIGAALSGMLADRFGRKPVFQASIVLWGLAS YLCSTAGDLDSLTFYRVLLGIGMGMEFPIAQSLLSEMIPASRRGKYIALMDGFWPLGF VAAGCLSYFLLPLTGWRSIFLVLALPAVFVLAIRFLIPESPRWLEQAGRREQADRVLR DIEARVMRSLGLTELPPPLRQPQRERSRPGFFSAFAELWSPAYRRRTLTVWGLWFFAL LGFYGLTSWLSALLQQSGFAVTQSVYYTVLISLAGIPGFLCAAWLVESWGRKPSCVLM LLGGGAMAYAYGQTAVFGGSLALLIGFGLAMQFFLFGMWAVLYTYTPELYPTSARATG SGFASAVGRIGSLLGPLVTGLVLPLTGQGGVFTLGALCFGVAALVVWAFGIETRGRTL EELAG" misc_feature 3879604..3880803 /locus_tag="PA3467" /note="benzoate transport; Region: 2A0115; TIGR00895" /db_xref="CDD:273327" gene 3881093..3882421 /locus_tag="PA3468" /db_xref="GeneID:878868" CDS 3881093..3882421 /locus_tag="PA3468" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252158.1" /db_xref="GeneID:878868" /translation="MDSTSLLDQLSGYWSALDQHPILHAGLAFGLLLVGALILGRVAR YIVLYAANLLARQPALHWLGDLIRNKVFQRLAQTTPSLLVQFGLPWIPEMPDKAAHFL GNLALAFTVLFLILALTALLNALLDIYARTEHARTRSIKGYVQLAKIAVFVFGAIIIV SIIIDRSPLLLLSGLGAMSAVLLLVYKDTLMSFVASVQLTSNDMLRVGDWIEMPQVGA DGDVVDITLYTVKVQNFDKTIVSVPTWRLMSESFKNWRGMQQSGGRRIKRAIYVDSSQ VRFLDEKEERRLSQVRLLTEYMARKQTELQEWNAANGGVAPLAANRRRLTNIGTFRAY ALAYLQNHPDIHPHMTCMVRQLQPTAQGIPLEIYCFTRTTAWVDYERIQGDVFDYLLA VMPEFGLGAYQQPSGQDLRQGLQGMLEGRDAEARSFEALAAPSRSDEATV" misc_feature <3881621..3882289 /locus_tag="PA3468" /note="Small-conductance mechanosensitive channel [Cell wall/membrane/envelope biogenesis]; Region: MscS; COG0668" /db_xref="CDD:440432" gene 3882441..3882983 /locus_tag="PA3469" /db_xref="GeneID:878869" CDS 3882441..3882983 /locus_tag="PA3469" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252159.1" /db_xref="GeneID:878869" /translation="MKPHLIYYVATSLDGFIARPDGSVDWLDRFAEGGNDHGYNGFYQ GIDGLLMGRGTYDIVRGFGDWPYPGKPCQVLTRNPRESAVEGVELRHDTPQEGLARLG EQGCRRVWLAGGGSLAGSCLAAGLLDEVIVSVIPQLLGAGIPLFAGGRERRLQLLEQH GYNSGIVQMRYQVIAEDDPQ" misc_feature 3882453..3882953 /locus_tag="PA3469" /note="Dihydrofolate reductase [Coenzyme transport and metabolism]; Region: FolA; COG0262" /db_xref="CDD:440032" gene 3882980..3883438 /locus_tag="PA3470" /db_xref="GeneID:879924" CDS 3882980..3883438 /locus_tag="PA3470" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252160.1" /db_xref="GeneID:879924" /translation="MTDNLLSISAACLFDDQGNLLLVRKRGTQAFMLPGGKREPGETP LAALQRELLEELRLPMGASTFEHLGSFQAPAANEANTRVDADIYVARLPHAVCAQAEL EELAWLVPGQAQPDNLAPLLRDHVLPALARRAAENPETQAEHRTRPDHVR" misc_feature 3883001..3883366 /locus_tag="PA3470" /note="uncharacterized NUDIX hydrolase subfamily; Region: NUDIX_Hydrolase; cd04690" /db_xref="CDD:467572" gene complement(3883560..3885254) /locus_tag="PA3471" /db_xref="GeneID:879925" CDS complement(3883560..3885254) /locus_tag="PA3471" /EC_number="1.1.1.38" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="NAD-dependent malic enzyme" /protein_id="NP_252161.1" /db_xref="GeneID:879925" /translation="MTETAKRPLYVPHAGPSLLEMPLLNKGSAFSTQERIDFNLQGLL PHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIY TPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERILGLG DQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPDLLNDPMYMGWRHERVSG AQYEEFVDLFIQAIKRRWPNVLLQFEDFAQTNAMPLLERYKDELCCFNDDIQGTAAVA VGTLLAACKAKGEKLSEQTVTFVGAGSAGCGIAEQIIAAMQLEGLDEAQARRRIFMVD RWGLLTDDMSNLLDFQHRLAQKRADLGAWGGQQGDDLALLEVIRNARPTVLIGVSGQR GLFSEEVIRELHSHCKQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQV GDKRIPIAQCNNAYIFPGIGLGVIAARANRVTEGMLMAAANALANCSPIVTQGEGAVL PALGDIREVSKRIAVAVAKQAQAEGKALHTSDEVLNDAIEANFWFPRYRAYRRTSF" misc_feature complement(3883569..3885254) /locus_tag="PA3471" /note="oxaloacetate-decarboxylating malate dehydrogenase; Region: PRK13529" /db_xref="CDD:237414" gene 3885711..3886307 /locus_tag="PA3472" /db_xref="GeneID:878938" CDS 3885711..3886307 /locus_tag="PA3472" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252162.1" /db_xref="GeneID:878938" /translation="MRSPFLTCLSVGFAALLAALSTPSLASNQVTHTFKPSKNSTLSP SRVVSTRQSANRSVVAAAASEVTDRAFSMIGTPYRWGGTTPKKGFDCSGLVNYVFQDV DDVDLPRTARAIYNMDNNKVSRGKLQPGDLVFFRIRSRSVDHVGIYVGNDRFVHAPRR GKKVRVSDLNSSYWKRHYLAGKRILPTTLAQVESTRKR" misc_feature <3885888..3886262 /locus_tag="PA3472" /note="Cell wall-associated hydrolase, NlpC_P60 family [Cell wall/membrane/envelope biogenesis]; Region: NlpC; COG0791" /db_xref="CDD:440554" gene complement(3886328..3887227) /locus_tag="PA3473" /db_xref="GeneID:878939" CDS complement(3886328..3887227) /locus_tag="PA3473" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="chloramphenicol-sensitive protein RarD" /protein_id="NP_252163.1" /db_xref="GeneID:878939" /translation="MRISGQGVLLSLAASVLFVTLPGYVHLLEPLDSLQVVAHRVVWS IPMVFLLVVATRQWPTLRAAWCRLFAEPWLLACFPLTAAMMLLQWGIFIWAPLAGKTL ELSLGYFLLPLAMVLVGRVFYGERLTPLQAIAVACALAGVLHEFWLTRAFSWVSLVTA LGYPPYFMLRRRMGVDALSGFVFEMLFLLPLALAALYWLGDESQAFREAPRLWLLLPM LGLISALAFGAMMASSRLLPMGLFGILSYVEPVLLFLVAVLFLGEAFRPEQLWTYAPI WLAVLLTGWDSARLLRKQARRGI" misc_feature complement(3886337..3887227) /locus_tag="PA3473" /note="Membrane protein RarD, contains two EamA domains, drug/metabolite transporter family [General function prediction only]; Region: RarD; COG2962" /db_xref="CDD:442202" gene complement(3887224..3888084) /locus_tag="PA3474" /db_xref="GeneID:878975" CDS complement(3887224..3888084) /locus_tag="PA3474" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252164.1" /db_xref="GeneID:878975" /translation="MRYLLFVTVLWAFSFNLIGEYLAGQVDSYFAVLTRVLLAGLVFL PLTRWRGVEPRFVGGVMLVGALQFGITYVCLYLSFNVLTVPEVLLFTVLTPVHVALFD DLLNRRFNFWALAAALVAVLGAAIIRYDGITGEFLQGFLLLQLANATFAAGQVLYKRL VRKYPSELPQRQRFGYFFVGALLVALPAWLLFGDPQRLPAGELQWGVLVWMGLLATAL GQFWWNKGATEVDAGTLAVMNNLHVPVGLLLNLLIWNQHADLPRLALGGAVIVASLWV NRLGRREVRA" misc_feature complement(3887263..3888054) /locus_tag="PA3474" /note="Carboxylate/Amino Acid/Amine Transporter; Region: 2A78; TIGR00950" /db_xref="CDD:273359" gene complement(3888178..3888984) /gene="pheC" /locus_tag="PA3475" /db_xref="GeneID:878976" CDS complement(3888178..3888984) /gene="pheC" /locus_tag="PA3475" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="cyclohexadienyl dehydratase" /protein_id="NP_252165.1" /db_xref="GeneID:878976" /translation="MPKSFRHLVQALACLALLASASLQAQESRLDRILESGVLRVATT GDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVPTSWPNLMRDFADDRFDIAMS GISINLERQRQAYFSIPYLRDGKTPITLCSEEARFQTLEQIDQPGVTAIVNPGGTNEK FARANLKKARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHPELCAVHPQQPF DFAEKAYLLPRDEAFKRYVDQWLHIAEQSGLLRQRMEHWLEYRWPTAHGK" misc_feature complement(3888211..3888903) /gene="pheC" /locus_tag="PA3475" /note="Cyclohexadienyl dehydratase, a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_PheC; cd01069" /db_xref="CDD:270231" gene complement(3889139..3889744) /gene="rhlI" /locus_tag="PA3476" /db_xref="GeneID:878967" CDS complement(3889139..3889744) /gene="rhlI" /locus_tag="PA3476" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="acyl-homoserine-lactone synthase" /protein_id="NP_252166.1" /db_xref="GeneID:878967" /translation="MIELLSESLEGLSAAMIAELGRYRHQVFIEKLGWDVVSTSRVRD QEFDQFDHPQTRYIVAMSRQGICGCARLLPTTDAYLLKDVFAYLCSETPPSDPSVWEL SRYAASAADDPQLAMKIFWSSLQCAWYLGASSVVAVTTTAMERYFVRNGVILQRLGPP QKVKGETLVAISFPAYQERGLEMLLRYHPEWLQGVPLSMAV" misc_feature complement(3889223..3889741) /gene="rhlI" /locus_tag="PA3476" /note="N-acyl-homoserine lactone synthase LasI (autoinducer biosynthesis) [Signal transduction mechanisms]; Region: LasI; COG3916" /db_xref="CDD:443121" protein_bind complement(3889859..3889878) /experiment="Beta-gal reporter assay [PMID: 17766417]" /experiment="EMSA [PMID: 17766417]" /experiment="Site directed mutagenesis [PMID: 17766417]" /note="Transcription factor binding site for NP_253948.; Evidence of regulation for: PA3476" /bound_moiety="AlgR" gene complement(3889925..3890650) /gene="rhlR" /locus_tag="PA3477" /db_xref="GeneID:878968" CDS complement(3889925..3890650) /gene="rhlR" /locus_tag="PA3477" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator RhlR" /protein_id="NP_252167.1" /db_xref="GeneID:878968" /translation="MRNDGGFLLWWDGLRSEMQPIHDSQGVFAVLEKEVRRLGFDYYA YGVRHTIPFTRPKTEVHGTYPKAWLERYQMQNYGAVDPAILNGLRSSEMVVWSDSLFD QSRMLWNEARDWGLCVGATLPIRAPNNLLSVLSVARDQQNISSFEREEIRLRLRCMIE LLTQKLTDLEHPMLMSNPVCLSHREREILQWTADGKSSGEIAIILSISESTVNFHHKN IQKKFDAPNKTLAAAYAAALGLI" misc_feature complement(3889928..3890641) /gene="rhlR" /locus_tag="PA3477" /note="transcriptional regulator SdiA; Region: PRK10188" /db_xref="CDD:182292" protein_bind complement(3890753..3890768) /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA3477" /bound_moiety="LasR" gene complement(3890775..3892055) /gene="rhlB" /locus_tag="PA3478" /db_xref="GeneID:878954" CDS complement(3890775..3892055) /gene="rhlB" /locus_tag="PA3478" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="rhamnosyltransferase subunit B" /protein_id="NP_252168.1" /db_xref="GeneID:878954" /translation="MHAILIAIGSAGDVFPFIGLARTLKLRGHRVSLCTIPVFRDAVE QHGIAFVPLSDELTYRRTMGDPRLWDPKTSFGVLWQAIAGMIEPVYEYVSAQRHDDIV VVGSLWALGARIAHEKYGIPYLSAQVSPSTLLSAHLPPVHPKFNVPEQMPLAMRKLLW RCIERFKLDRTCAPEINAVRRKVGLETPVKRIFTQWMHSPQGVVCLFPAWFAPPQQDW PQPLHMTGFPLFDGSIPGTPLDDELQRFLDQGSRPLVFTQGSTEHLQGDFYAMALRAL ERLGARGIFLTGAGQEPLRGLPNHVLQRAYAPLGALLPSCAGLVHPGGIGAMSLALAA GVPQVLLPCAHDQFDNAERLVRLGCGMRLGVPLREQELRGALWRLLEDPAMAAACRRF MELSQPHSIACGKAAQVVERCHREGDARWLKAAS" misc_feature complement(3890820..3892055) /gene="rhlB" /locus_tag="PA3478" /note="UDP-glycosyltransferases and similar proteins; Region: GT1_Gtf-like; cd03784" /db_xref="CDD:340817" misc_feature complement(order(3890823..3890825,3890832..3890837, 3891756..3891758,3891975..3891977,3892053..3892055)) /gene="rhlB" /locus_tag="PA3478" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:340817" misc_feature complement(order(3891066..3891068,3891075..3891080, 3891084..3891086,3891090..3891092,3891276..3891278, 3891450..3891452,3891540..3891542,3891552..3891554, 3891588..3891590,3891597..3891599,3892011..3892013, 3892017..3892022)) /gene="rhlB" /locus_tag="PA3478" /note="active site" /db_xref="CDD:340817" misc_feature complement(order(3891075..3891080,3891084..3891086, 3891090..3891092,3891276..3891278,3892020..3892022)) /gene="rhlB" /locus_tag="PA3478" /note="TDP-binding site [active]" /db_xref="CDD:340817" misc_feature complement(3892017..3892019) /gene="rhlB" /locus_tag="PA3478" /note="acceptor substrate-binding pocket [active]" /db_xref="CDD:340817" gene complement(3892121..3893008) /gene="rhlA" /locus_tag="PA3479" /db_xref="GeneID:878955" CDS complement(3892121..3893008) /gene="rhlA" /locus_tag="PA3479" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="rhamnosyltransferase subunit A" /protein_id="NP_252169.1" /db_xref="GeneID:878955" /translation="MRRESLLVSVCKGLRVHVERVGQDPGRSTVMLVNGAMATTASFA RTCKCLAEHFNVVLFDLPFAGQSRQHNPQRGLITKDDEVEILLALIERFEVNHLVSAS WGGISTLLALSRNPRGIRSSVVMAFAPGLNQAMLDYVGRAQALIELDDKSAIGHLLNE TVGKYLPQRLKASNHQHMASLATGEYEQARFHIDQVLALNDRGYLACLERIQSHVHFI NGSWDEYTTAEDARQFRDYLPHCSFSRVEGTGHFLDLESKLAAVRVHRALLEHLLKQP EPQRAERAAGFHEMAIGYA" misc_feature complement(3892193..3892972) /gene="rhlA" /locus_tag="PA3479" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" protein_bind complement(3893269..3893288) /experiment="'Beta-gal reporter assay [PMID: 14526008, 24935161]'" /experiment="EMSA [PMID: 14526008]" /experiment="Site directed mutagenesis [PMID: 24935161]" /note="'Transcription factor binding site for NP_252167.; Evidence of regulation for: PA3479, PA3478'" /bound_moiety="RhlR" protein_bind complement(3893271..3893286) /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA3479, PA3478'" /bound_moiety="LasR" gene complement(3893432..3893998) /locus_tag="PA3480" /db_xref="GeneID:878281" CDS complement(3893432..3893998) /locus_tag="PA3480" /EC_number="3.5.4.13" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="deoxycytidine triphosphate deaminase" /protein_id="NP_252170.1" /db_xref="GeneID:878281" /translation="MTIKSDKWIRRMAQEHGMIEPFVERQVRGADDSRVISYGVSSYG YDVRCAAEFKVFTNIHSAVVDPKNFDEKSFVDINSDVCIIPPNSFALARTVEYFRIPR DVLTICLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTNLPAKIYANEGVAQMLFL QSDEACEVSYKDRGGKYQGQRGVTLPKA" misc_feature complement(3893438..3893995) /locus_tag="PA3480" /note="dCTP deaminase [Nucleotide transport and metabolism]; Region: Dcd; COG0717" /db_xref="CDD:440481" protein_bind complement(3893924..3893943) /locus_tag="PA3480" /experiment="Beta-gal reporter assay [PMID: 17766417]" /experiment="DNA-array expression analysis [PMID: 17766417]" /experiment="EMSA [PMID: 17766417]" /experiment="Site directed mutagenesis [PMID: 17766417]" /note="Transcription factor binding site for NP_253948.; Evidence of regulation for: PA3479" /bound_moiety="AlgR" gene complement(3894099..3895193) /locus_tag="PA3481" /db_xref="GeneID:878282" CDS complement(3894099..3895193) /locus_tag="PA3481" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252171.1" /db_xref="GeneID:878282" /translation="MSAITRQTVEATLRQYQDPYLNQDPVSAGCLREVEIQGDRVRVR LELGYAAGLFRNGLAQTLQMALEALDGVARAEVRVDCVIQPHKAQPQVEVMGNVKNIV AVASGKGGVGKSTTAANLALALAREGARVGILDADIYGPSQGIMFGLPEGTRPKVREQ KWFEPLEAHGVQVMSMAFLTDDSTPVVWRGPMVSGALIQLITQTAWDNLDYLVVDMPP GTGDIQLTLAQKVPVAGAVIVTTPQDLALLDAKKGVEMFRKVNIPVLGVVENMAVHIC SNCGHAEHLFGEGGGEKLAAQFGVELLASMPLSIAIRTQADSGRPTVIADPESQLAML YQEIARHVGARIVLSERASVGLPNISISDD" misc_feature complement(3894963..3895178) /locus_tag="PA3481" /note="Iron-sulfur cluster assembly protein; Region: FeS_assembly_P; pfam01883" /db_xref="CDD:460370" misc_feature complement(3894168..3894905) /locus_tag="PA3481" /note="NUBPL iron-transfer P-loop NTPase; Region: ParA; pfam10609" /db_xref="CDD:431392" misc_feature complement(order(3894255..3894260,3894267..3894275, 3894381..3894386,3894459..3894461,3894465..3894467, 3894849..3894872)) /locus_tag="PA3481" /note="active site" /db_xref="CDD:349757" misc_feature complement(order(3894255..3894257,3894261..3894266, 3894270..3894272,3894438..3894440,3894447..3894449, 3894519..3894521,3894528..3894530,3894534..3894536, 3894624..3894629,3894756..3894761,3894768..3894770, 3894774..3894779,3894864..3894872)) /locus_tag="PA3481" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:349757" gene 3895324..3897357 /gene="metG" /locus_tag="PA3482" /db_xref="GeneID:878831" CDS 3895324..3897357 /gene="metG" /locus_tag="PA3482" /EC_number="6.1.1.10" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="methionine--tRNA ligase" /protein_id="NP_252172.1" /db_xref="GeneID:878831" /translation="MSEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQ AVYVCADDAHGSAIMLRAEREGITSEQLIDAVRAEHMGDFADFLVDFDNYHSTHSEEN RELSSAIYLKLRDAGHIDTRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEA CGATYAPTELKDPKSAISGATPVLKESLHYFFKLPDFEAMLKQWTRSGALQESVANKL AEWLDSGLQQWDISRDAPYFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDF DAFWGKDSGAELYHFIGKDIVNFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSK SRGTFVKARTYLDHLDPEYLRYYYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIA SRCAGFIHKGNAGVLVGADPAPELLAAFREAAPGIAEAYEARDFNRAMREIMALADRA NAWIAEQAPWALAKQEGQQDKVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVA PLTWADHQTLLANHQLNPFQPLMTRIEPAKVEAMIEASKEDLAAASQPAGNGELVKEP IAAEIDFDAFAAVDLRIALIEKCEFVEGADKLLRLSLDIGDAKRNVFSGIKSAYPDPS ALEGRLTLYVANLAPRKMKFGVSEGMVLAAGPGGEEIYLLSPDSGAKPGQRVK" misc_feature 3895333..3897354 /gene="metG" /locus_tag="PA3482" /note="methionyl-tRNA synthetase; Reviewed; Region: metG; PRK00133" /db_xref="CDD:234655" gene 3897391..3898191 /locus_tag="PA3483" /db_xref="GeneID:880026" CDS 3897391..3898191 /locus_tag="PA3483" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252173.1" /db_xref="GeneID:880026" /translation="MNAWKLAAGVLLAALYGCSAEHAESVSGNAGFQGETGKPGTALA YEHRVGIRLPAARIDAQLAASRDACNSERLGQCDVLAIEQRGGIGHYAELTVRIVPDG VEKLVAAAAEGGTLESRQTRAEDLAQAVADTRQQRERLQREYQTLQQYQGRKDMSVGD LLALAKEIAAVEAQLADNAQAGAQQQRRIATNLLTLSFSSEAQPDSRLGQLATAAGQL LDDLVDGTIAAMKFFAYSLPFLVVLLPLGLLLRGLWRWLRRPGKNEAR" misc_feature 3897514..3898095 /locus_tag="PA3483" /note="Domain of unknown function (DUF4349); Region: DUF4349; pfam14257" /db_xref="CDD:464117" gene 3898278..3899504 /locus_tag="PA3484" /db_xref="GeneID:880027" CDS 3898278..3899504 /locus_tag="PA3484" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252174.1" /db_xref="GeneID:880027" /translation="MTATSDLIESLISYSWDDWQVTRQEARRVIAAIRNDNVPDATIA ALDKSGSLIKLFQRVGPPELARSLIASIAGRTTMQRYQARNALIRSLINNPLGTQTDN WIYFPTITFFDICADLADAAGRLGFAAAGATGVASQAIQGPFSGVGATGVNPTDLPSI AFGDQLKLLNKDPATVTKYSNPLGDLGAYLSQLSPQDKLNQAQTLVGQPISTLFPDAY PGNPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQTRDEDAKDYQAAVSIKSANTSI GLGQVVVSTAIKYELFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLA SQQDLRKLPKTRGAFPSIDLRAYAGNPRNWPRDNVRALASEYTSRPWDDNLSPGWPMF VDDAYATFLDPGMRFP" gene 3899501..3899938 /locus_tag="PA3485" /db_xref="GeneID:879938" CDS 3899501..3899938 /locus_tag="PA3485" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252175.1" /db_xref="GeneID:879938" /translation="MKTVALILASLALLACTAESGVDFDKTLTHPNGLVVERPVGFDA RRSAEGFRFDEGGKLRNPRQLEVQRQDAPPPPDLASRRLGDGEARYKVEEDDGGSAGS EYRLWAAKPAGARWIVVSASEQSEDGEPTFALAWALLERARLQ" misc_feature 3899600..3899935 /locus_tag="PA3485" /note="Tsi3 family protein; Region: Tsi3_fam; NF038331" /db_xref="CDD:439626" gene 3900233..3902659 /locus_tag="PA3486" /db_xref="GeneID:879939" CDS 3900233..3902659 /locus_tag="PA3486" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252176.1" /db_xref="GeneID:879939" /translation="MFNPANQTHFSLSLDGLRHDLQVLEFSGHEGISRPYRFELELVS ERAGLDLEALMHRPAFLAFTPQGQGVHGLVYGAAQGDAGKRLTRYRLTLVPHLAYLAQ RNNQRIFQHLTVPQIVALILEEHGILADAYRFQLGTRYPEREYCVQYDESDLHFVQRL CAEEGIHFHFRHSAEAHLLVFGDDQTVFPRLGRPTAYVHDSGLVADEPVIKRFSLRLA SRTTRTTRRDYDFEKPRLLLEAGNRPAADAPAEPDLEDYDYPGRFVDRQRGKLLSQRA LERHRADRRLGEGVSDQPLLVSGHFLEIAEHPRAEWNDLWLLSEVFHEGKQPQVLEEN VTSDTSASTDDFQQGYRNRFLATPWEVFFRPPLEHPKPRVLGSQTAVVTGPPGEEIHC DRYGRVRVQFHWDREGQGDDKSSCWLRVASGWAGNGYGGIVIPRVGMEVLVDFLEGDP DQPLVSGCVYHAAHPVPYELPANQTRSVFKSLSSPGGDGYNELRIEDRKGQEQIFVHA QRDWDENIEHDQKIRVGHERHDTVEANSYSEFKAEEHHTVHGERKVELKADDHLTVGD SQHVKLGRAYLARAGREIHLKAGQKMVIEADSELTVKAGGSFIRLDASGIAISGPLAR INAGGAPGSGSGIAIKMPLTPGAADADVAGRPLQPANAGLHASDPKQNGEYRFDIRLQ DIPGDEGFPLIHTPWRIVQGKEHNLVLEGESDEKGRLVLDDTQQRQLSNACERAPGDV WLVYPGQRIGIRPHREREGWDATRHALGALDFHDTLGGQRAPTPLEHQRGKLDSCCEG DLYSHLLAKD" misc_feature 3900260..3901819 /locus_tag="PA3486" /note="type VI secretion system Vgr family protein; Region: VI_Rhs_Vgr; TIGR03361" /db_xref="CDD:274542" misc_feature <3901970..3902095 /locus_tag="PA3486" /note="Uncharacterized protein conserved in bacteria (DUF2345); Region: DUF2345; pfam10106" /db_xref="CDD:431059" gene 3902663..3905962 /gene="pldA" /locus_tag="PA3487" /db_xref="GeneID:880040" CDS 3902663..3905962 /gene="pldA" /locus_tag="PA3487" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phospholipase D" /protein_id="NP_252177.1" /db_xref="GeneID:880040" /translation="MLQKKPYNGLHEKELNQINQQDGSPCVAISAPGCFIKGSNLFSE KRAGNRVRFFTTGRDYFSDLASALDSASSSIFITGWQVNYDVLLDGRRSLWQCLRQAL ERSPALKVYVMPWLSPSGSLGTYDFETMLAVFQLNAGLEGGARAFCTPAIQQSDMQGL GVAFSHHQKSVVIDNRIGYVGGIDLAYGRRDDNDFSLDASGRRGNDAYNPGLPHLGWM AEDEHVSSMGLMMATLFDLSRPLASLTLHAPTLRLSPFPHIAASDEPLLSIPLAPSRA RALNGAAYLSDLFRSPMLPSLQWLGRAYNSSKEGLDEGFERLDALRRQMVASSIRAIA NLIADNLDALPIEPELERRLRAWLEELRTAALNLPEALRIKSLLLINQWMSETELGQV LTLISGKGFEDIPQNLSGKAGELAGSLFWTLHRLMQARAGGHQQPYRYLDEAPQPLAS PDNARLAADQPRMPWQDVHCRIEGPSVYDLARNFIDRWNGQQAYLAKTPALQDTALVR SALEAVMKWLNSLAAAAGLENYLDEKRNLRLELDPPTPCWINAPEQLPQEPEVRRGGM TVQVLRSAAARMLEQEQAGRLGAGVNLPLQVGVSTEGVQSNCKDAMLLAISGAQQFIY IENQFFQSEFGKEGEVFKDLPLSGPMASLRDVGSLRRDFVVRIRLEEALEQRDLWLLD WAEVEKIAQEPGTEARQFLKSMLAMWGVNAQGWLTHKLGEAQHGLLNEIGEALARRIE RAIQREHPFHVYLVLPVHPEGALNVPNIMHQVHLTQQSLVFGEQSLVKRIQRQMALKA LEGKSDPAQAREIIERKDARGRPVYEQQDWSRYLTLLNLRTWAVLGGRVVTEQIYVHS KLLIADDRVAILGSANINDRSLQGERDSELAVMVRDSEPLTVRLDGKNDAIVGKAIHQ LRVNLWKKHFGLSQGPGGFVKPASELSAYLSIPAAQEAWEAIQTLAKENTRAYERTFN FIPQNISQTQLQLTPEPPKGFEDGFPASIWPTWAYRKPGELRAGGQLMEPMPYQEIFW RSSNLTSVKTFPPPNGVSGFITALPTSWTRGERNDSGLNLSILAHQDSRSLPTQVAMN GDSSAQGKHRT" misc_feature 3902813..3903262 /gene="pldA" /locus_tag="PA3487" /note="Catalytic domain, repeat 1, of vertebrate phospholipases, PLD1 and PLD2, and similar proteins; Region: PLDc_vPLD1_2_like_1; cd09104" /db_xref="CDD:197203" misc_feature order(3903161..3903163,3903167..3903169,3903206..3903208, 3903212..3903214,3903245..3903247) /gene="pldA" /locus_tag="PA3487" /note="putative active site [active]" /db_xref="CDD:197203" misc_feature 3903161..3903163 /gene="pldA" /locus_tag="PA3487" /note="catalytic site [active]" /db_xref="CDD:197203" misc_feature <3904043..3905671 /gene="pldA" /locus_tag="PA3487" /note="phospholipase D; Region: PLN02866" /db_xref="CDD:215467" misc_feature 3904460..3905344 /gene="pldA" /locus_tag="PA3487" /note="Catalytic domain, repeat 2, of vertebrate phospholipases, PLD1 and PLD2, yeast PLDs, and similar proteins; Region: PLDc_vPLD1_2_yPLD_like_2; cd09141" /db_xref="CDD:197239" misc_feature order(3905225..3905227,3905231..3905233,3905270..3905272, 3905276..3905278,3905315..3905317) /gene="pldA" /locus_tag="PA3487" /note="putative active site [active]" /db_xref="CDD:197239" misc_feature 3905225..3905227 /gene="pldA" /locus_tag="PA3487" /note="catalytic site [active]" /db_xref="CDD:197239" gene 3906055..3907089 /locus_tag="PA3488" /db_xref="GeneID:880041" CDS 3906055..3907089 /locus_tag="PA3488" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252178.2" /db_xref="GeneID:880041" /translation="MTFEIPEEMEWATYDASRVWQISKGGGHNFTAEVTAVGDNGSYD YDSMIFYVSEKVDKNEFHNASNYIKGTAEIYQDHLRENIKLDKKAISTLQKNKSEEKS IERIKKGIAEMEAKIPLAKIYEHDLGIPDSHILGSKNIPFHVLLWRNQRVYYFTFSKP TENSAQRIKDLIARFRTRELYEVPNEPGICFPYGFIADDGKTAYELKNSLRFTRTPNV IFSLLTASANDPWQTRPTSGLYDSDFRPGYDRQKWKKSALLDSLHIGKRLAAFEGWRL DPRPDSGERERAWFGLAHTGGTLDPLVAIQVQTFQKGTDDLTDYTPPPEEVLPRLKAL SQSIEQRLAR" misc_feature 3906598..3907077 /locus_tag="PA3488" /note="Tle cognate immunity protein 4 C-terminal domain; Region: Tli4_C; pfam18426" /db_xref="CDD:436493" gene 3907268..3907852 /locus_tag="PA3489" /db_xref="GeneID:879985" CDS 3907268..3907852 /locus_tag="PA3489" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="electron transport complex subunit A" /protein_id="NP_252179.1" /db_xref="GeneID:879985" /translation="MTELALILVSAILVNNFVLVQFLGLCPFMGVSRKIETAIGLSLA TTFVLTLAAMCSHILQRYVLRPLDLEYLRTIGFILVIAVVVQFTEMLVKKTSPLLYRV LGIFLPLITTNCIVLGVALLNANKAEYGFLQATTQGFGAGLGFSLVLVLFAALRERIA IADVPAPFRGAAIGMITAGLMSLAFMGFSGLVRP" misc_feature 3907268..3907846 /locus_tag="PA3489" /note="electron transport complex protein RsxA; Provisional; Region: PRK05151" /db_xref="CDD:235352" protein_bind 3907373..3907385 /locus_tag="PA3489" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(3907419..3907431) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 3907849..3908415 /locus_tag="PA3490" /db_xref="GeneID:879986" CDS 3907849..3908415 /locus_tag="PA3490" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="electron transport complex subunit B" /protein_id="NP_252180.1" /db_xref="GeneID:879986" /translation="MNGVFLAIGALLPICLAGGALLGYAAVRFRVQGDPVAEQVNALL PQTQCGQCGYPGCKPYAEAIAAGDKINKCPPGGEATIRALADLLDLEPEPLDAAEETP PRVAYIREAECIGCTKCIQACPVDAIVGAARLMHTVIADECTGCDLCLEPCPVDCIEM REIPDDVRHWKWPQPSPRLIASDRERAA" misc_feature 3907849..3908412 /locus_tag="PA3490" /note="electron transport complex protein RnfB; Provisional; Region: PRK05113" /db_xref="CDD:235347" gene 3908412..3910736 /locus_tag="PA3491" /db_xref="GeneID:879869" CDS 3908412..3910736 /locus_tag="PA3491" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="electron transport complex subunit C" /protein_id="NP_252181.1" /db_xref="GeneID:879869" /translation="MSALHAFPGGLCLPANKERSTALPIQQAPLAQRYIVPLGQHIGA PARPCVEVGQAVLKGQTIALPDGTVSAALHAPTSGTVVAIGAHPYPHASGLPAPAIVI ASDGLERWTELHPCPDFRAESPLALLERIRAAGIGGLGGAGFPTAAKLAARPAEKIHT LVVNGAECEPYISADDLLMRERATQVLGGIDILVQILCPEEVLVGIEDDKPEAIAALG AALGERPYRIVALPTRYPSGGERQLIQLLTGREVPADGLPADIGILCQNVGTLAAVHD AVVLGRPLISRITTLAGGALERPMNVEALIGTPVHELLAFAGLAEGRLERVLMGGPMM GFALPDLSVPLIKTCNCLLAGDATELPEPVPAMPCIRCGDCAQVCPVSLLPQQLHFFA LGDEHEQLLAHNLFDCIECGACAYVCPSSIPLVQYYRASKAEIREQRQKLLKAEQSRE RFEQRQARLRRDEERRAAERAQRAEKAALARAAQAEREEAAPATAVDPVQAAIERARA RKQAGSGSERLKRLKIEASMARVALKKAEKQLLSHDTPEQHGLVAELRAAAEAADKAL ADAEASLPRDLPSAPPAALDDEAELKKAKAQAAMARAQLKRSEKAFGEAPGAEQRATL DELRAEVERCEATLARLERHAPKPAAPGDDGQAALKRAKIALVGKRAALKKAEQAGVM DSELERLRGELQAAERDLHAAEDACGKPAPELVRIDKRPVDPRIRELKTELAYARAAL KKLERLANADAAALAAARARLSAAERALTEHGTE" misc_feature 3908421..3910679 /locus_tag="PA3491" /note="electron transport complex protein RnfC; Provisional; Region: PRK05035" /db_xref="CDD:235334" gene 3910739..3911773 /locus_tag="PA3492" /db_xref="GeneID:879870" CDS 3910739..3911773 /locus_tag="PA3492" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="electron transport complex subunit D" /protein_id="NP_252182.1" /db_xref="GeneID:879870" /translation="MALPRPTSPHARGSNRTPAIMRLVLGACVPGLLTLTWLYGPGTL LNLAWASLVALACEAAMLALRKRPPGVFLKDGSALVTALLLAVALPPYAPWWLTLVAT FFALVFGKHLYGGLGQNPFNPAMLGYVVALVSFPLEMTRWPSPDSALGLPDSLREFLG LATRPDAWAHATALDVLKTDRSLTVDELFAGNPAFGHLGSAGSEWVNLAFLLGGLFLL WRRLFTWHAPLGMLAGLFAMSLLFWNGSGSDSHGSPLFHLFSGATMLGAFFIVTDPVS GATSNRGRLVFGLGVGVLTYVIRAWGGYPDGVAFAVLLMNLAAPTIDYYTRPRTYGHR KAERGFKAGD" misc_feature 3910760..3911737 /locus_tag="PA3492" /note="electron transport complex, RnfABCDGE type, D subunit; Region: rnfD; TIGR01946" /db_xref="CDD:131001" gene 3911773..3912417 /locus_tag="PA3493" /db_xref="GeneID:879979" CDS 3911773..3912417 /locus_tag="PA3493" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="electron transport complex subunit G" /protein_id="NP_252183.1" /db_xref="GeneID:879979" /translation="MDAATRRSMLRNALLLGLFALVGVGLVALVQQFTEARIAEAQRE ARGRALLELLPPGSYDNHPLDSQVPTFAPKLLGLDAPRPAYVARLHGQASAVILQASA PDGYSGAIQLLVGVTAQGRLLGVRVVAHKETPGLGDRIELAKSPWVHGFDGKSLGDPA DAGWAVKKDGGTFDQFAGATVTPRAVVRAVHKALRYFDANRERLLAPEEAAGHE" misc_feature 3911809..3912369 /locus_tag="PA3493" /note="electron transport complex, RnfABCDGE type, G subunit; Region: rnfG; TIGR01947" /db_xref="CDD:273889" gene 3912410..3913132 /locus_tag="PA3494" /db_xref="GeneID:879980" CDS 3912410..3913132 /locus_tag="PA3494" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="electron transport complex subunit E" /protein_id="NP_252184.1" /db_xref="GeneID:879980" /translation="MSEQDFREIARNGLWRNNPGLVQLLGLCPLLGTSNSTVNALGLG LATMLVLACSNAAVSLVRGAVSEAIRLPAFVMIIAVLTTCIELLMQAWTYELYQVLGI FIPLITTNCVILGRAEAFAAKNGVLRASFDGLLMGLGFALVLLVLGGLRELLGQGTLL ADMHLLFGPAAADWKIQPFPQYQGFLLAILPPGAFIMLGLLIALKNRIDESLAERAKV QAGDVPATQRQRQRVRVTGVIE" misc_feature 3912419..3913108 /locus_tag="PA3494" /note="electron transport complex RsxE subunit; Provisional; Region: PRK12405" /db_xref="CDD:237091" gene 3913129..3913767 /gene="nth" /locus_tag="PA3495" /db_xref="GeneID:879069" CDS 3913129..3913767 /gene="nth" /locus_tag="PA3495" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="endonuclease III" /protein_id="NP_252185.1" /db_xref="GeneID:879069" /translation="MNAAKRAEIFRRLHEDNPEPRTELAYTTPFELLIAVILSAQATD VGVNKATARLYPVANTPEAIHALGVEGLSEYIKTIGLYNSKAKNVIETCRILIEKHGG QVPDNREDLEALPGVGRKTANVVLNTAFRQLAMAVDTHIFRVANRTGIAPGKNVLEVE KKLLKFVPREYLLDAHHWLILHGRYVCKARKPQCGSCRIEDLCEYKHKTSDD" misc_feature 3913129..3913752 /gene="nth" /locus_tag="PA3495" /note="endonuclease III; Provisional; Region: PRK10702" /db_xref="CDD:182661" gene 3913876..3914055 /locus_tag="PA3496" /db_xref="GeneID:879070" CDS 3913876..3914055 /locus_tag="PA3496" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252186.1" /db_xref="GeneID:879070" /translation="MAKAKEELEIDDEAGVEEDDGEETSVEVAKTNLTKRRIIDNLLE ERRLQRQLSDYDFDL" gene complement(3914117..3915337) /locus_tag="PA3497" /db_xref="GeneID:880023" CDS complement(3914117..3915337) /locus_tag="PA3497" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252187.1" /db_xref="GeneID:880023" /translation="MMKTHPLFPVLLLSSLSALAASPPSEASKTGKPFPHVGLRSDDG RSSLDIGGALRVNYRDEHWKSTENNGRLLFDTFRLDIQATHEDFFSDLGYWFQDDGKR AIDRGFVGYRFSDLSSLQLGAPFKPFGLEPYPQFGWSYHIPFFLGYGVSAGSGAKYVY KDADWHVQAGYFPRMLPGGVRYSPEVGRYADLDDNAVAAIHSRQDNEKRDQLNLRVAR NLAGDGWKSELGASLAASRLYNATTRDDGRYWAAGLHGVLNAGNWTFSGEAIRYAFDP KNPAGVSDDVVLMGTNGLTPAYLMAARASVASFNVAYDVPTPNLGMLKKLRFYNDYSR MFKDKAGWDDSQMYTAGVQFFALPIMGWLDFTWGRNANPYGGAESGTGFSSTSSSRSN EWIFRTNLNIGYYF" misc_feature complement(<3914504..3915223) /locus_tag="PA3497" /note="Phosphate-selective porin [Inorganic ion transport and metabolism]; Region: OprP; COG3746" /db_xref="CDD:442960" gene complement(3915807..3916763) /locus_tag="PA3498" /db_xref="GeneID:880024" CDS complement(3915807..3916763) /locus_tag="PA3498" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_252188.1" /db_xref="GeneID:880024" /translation="MTHDNRLAAFVHTLRFEAQGILGVELRPQGDQVFPPFSAGAHID LHLPNGLVRSYSLLNSPEDCGRYVLGILRDRGSRGGSAFVHDSLRVGMQLQISRPRNL FPLEENAAHSVLVAGGIGVTPIYCMFNRLRALGRSVELLYCARSRQEAAFVEELAASD AAIQLHFDDEKGGPMDLGAFLGARASTAHFYCCGPTPMIDAFETHCERLGHPHVHIER FAAAPQAPAAPQGSYEVRLARSGTSIEVPSGKSLLDALLEAGVAVDCSCREGVCGSCE TRVLEGEPEHRDGVLTKAEKIANQTMMVCVSGCKGSRLVLDL" misc_feature complement(3916107..3916721) /locus_tag="PA3498" /note="Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster. PDR has an an N-terminal ferrredoxin reductase (FNR)-like NAD(H) binding domain and a C-terminal iron-sulfur...; Region: PDR_like; cd06185" /db_xref="CDD:99782" misc_feature complement(order(3916107..3916109,3916398..3916400, 3916521..3916526,3916530..3916532,3916548..3916556, 3916596..3916598,3916602..3916607)) /locus_tag="PA3498" /note="FMN-binding pocket [chemical binding]; other site" /db_xref="CDD:99782" misc_feature complement(order(3916596..3916601,3916605..3916607)) /locus_tag="PA3498" /note="flavin binding motif [active]" /db_xref="CDD:99782" misc_feature complement(order(3916491..3916493,3916512..3916514, 3916521..3916523,3916530..3916532)) /locus_tag="PA3498" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99782" misc_feature complement(order(3916395..3916397,3916401..3916412, 3916422..3916424)) /locus_tag="PA3498" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99782" misc_feature complement(order(3916179..3916184,3916329..3916337, 3916404..3916409)) /locus_tag="PA3498" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99782" misc_feature complement(3915810..3916061) /locus_tag="PA3498" /note="Ferredoxin [Energy production and conversion]; Region: Fdx; COG0633" /db_xref="CDD:440398" gene complement(3916778..3917212) /locus_tag="PA3499" /db_xref="GeneID:879914" CDS complement(3916778..3917212) /locus_tag="PA3499" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252189.1" /db_xref="GeneID:879914" /translation="MTAVRRIRAAALPDLPDASWSNALLVGEELVMSGMTAHPATRQA AERGAALDAHAQALVVLGKVKALLEAAGGHVGNLYKLNVYVTRIADKDAIGRARQEFF AGQGTFPASTLVEVSGLVFPELLVEIDAWARLDIDLANCDEA" misc_feature complement(3916817..3917155) /locus_tag="PA3499" /note="YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no...; Region: YjgF_YER057c_UK114_family; cd00448" /db_xref="CDD:100004" misc_feature complement(order(3916820..3916822,3916826..3916828, 3916832..3916834,3916865..3916888,3916919..3916921, 3916928..3916930,3916961..3916963,3916967..3916969, 3916973..3916978,3916982..3916984,3917111..3917116, 3917120..3917122,3917126..3917128,3917135..3917137, 3917141..3917143,3917150..3917155)) /locus_tag="PA3499" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100004" misc_feature complement(order(3916832..3916834,3916880..3916882, 3916928..3916930,3916940..3916942,3917153..3917155)) /locus_tag="PA3499" /note="putative active site [active]" /db_xref="CDD:100004" gene complement(3917209..3918228) /locus_tag="PA3500" /db_xref="GeneID:879915" CDS complement(3917209..3918228) /locus_tag="PA3500" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252190.1" /db_xref="GeneID:879915" /translation="MSTVDPVEQLLANGLKNLWYPICPVGFIEDKPVSLRRLGYKLAV WRDTDGTLHALEDHCPHRGAPLSRGVNLGDRLQCPYHGVEVRCDGVTARVPGSPGCKL EGSQATRFFHITEAAGAVWLYNSAGNVEEAPPLVLPEQLTDPEFSHFLCYTEWRGDYR YVLDNVMDPMHGTYLHKQSHSMSEGESQARFVTRDTDTGFIFEKDGQRGVNFDWTEWA DTGMHWMRLEIPYPKTGGPGGNFHIVGSYTPIARDLCAVFHWRCRPLTGWQRDTWRFL YRNRLEARHWAVLEQDREMLEFMEPDANQRENLYQHDLGLVRLRRHLKNLAKAQLELI EARQL" misc_feature complement(3917230..3918186) /locus_tag="PA3500" /note="Chlorophyllide a oxygenase/letal leaf spot protein [Coenzyme transport and metabolism]; Region: PobA; COG5749" /db_xref="CDD:444459" protein_bind 3918095..3918107 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(3918251..3918469) /locus_tag="PA3501" /db_xref="GeneID:880035" CDS complement(3918251..3918469) /locus_tag="PA3501" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252191.1" /db_xref="GeneID:880035" /translation="MQDRYLEPHQARTREPNAFEDLLGDSIERAYAAGLHDLPGLLGY LNQAGPTCPGGGPWTEEAYKTLMARLGA" misc_feature complement(3918254..3918469) /locus_tag="PA3501" /note="Recombinase-like helix-turn-helix domain; Region: HTH_62; pfam20552" /db_xref="CDD:466701" gene complement(3918471..3918788) /locus_tag="PA3502" /db_xref="GeneID:880036" CDS complement(3918471..3918788) /locus_tag="PA3502" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252192.1" /db_xref="GeneID:880036" /translation="MSDTLLLTVLLRHDQSKNLDEIQARMKAMDWWERFPGEGVEIVS WTVAMGLGQIVTLRLPPALLPRVNVELERSAWGVFRTECYPTYDFVPVRETIRERVRT GGQ" gene complement(3918796..3919760) /locus_tag="PA3503" /pseudogene="unknown" /db_xref="GeneID:879168" gene complement(3919774..3921258) /locus_tag="PA3504" /db_xref="GeneID:879169" CDS complement(3919774..3921258) /locus_tag="PA3504" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase" /protein_id="NP_252194.1" /db_xref="GeneID:879169" /translation="MIDLNPIQPICIAGEWRAGGGDLYESLYPATGEAVARLHAASLE DVEEAMAGAHRAFRESGWAQRKPHERATVLYRIAALIRERSEELAQLQRLDNGKPIRE TRNLVASAAATFQFFAAACETLEESITPSRGDFVSMSVYEPMGVVVAITPWNSPIASE AQKLAPALAAGNAVVVKPAEITPLAALALARICDEAGLPRGLVSVLPGKGALIGDALT RHPLARRVSFTGGTRTGKHIARIAADKMMPVSLELGGKSPTMVLADADLDHAVAGVLY GIFSSSGESCIAGSRLFVASERYDEFMERLATGAAALRVGDPADERTQMGPLISARHR ESVERYVEMGVAEGGRLRTGGLRPHGGAFDRGYFYTPTIIEGLTNGARLCREEVFGPV LVAMPFASEEALIEEANDSCYALAAGIWTRDFQRAWRLGRAVQAGTVWINTYKQFSIS TPFGGWRDSGLGREKGRLGILQYMEQKSLYWGLNEQPLAWAGSH" misc_feature complement(3919816..3921183) /locus_tag="PA3504" /note="Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like; Region: ALDH_DhaS; cd07114" /db_xref="CDD:143432" misc_feature complement(order(3919900..3919902,3920014..3920016, 3920092..3920094,3920098..3920100,3920401..3920403, 3920497..3920505,3920545..3920550,3920557..3920559, 3920566..3920577,3920719..3920724,3920728..3920730, 3920773..3920775,3920797..3920811)) /locus_tag="PA3504" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:143432" misc_feature complement(order(3920401..3920403,3920410..3920412, 3920503..3920505,3920797..3920799)) /locus_tag="PA3504" /note="catalytic residues [active]" /db_xref="CDD:143432" gene complement(3921270..3922073) /locus_tag="PA3505" /db_xref="GeneID:879175" CDS complement(3921270..3922073) /locus_tag="PA3505" /EC_number="1.4.1.21" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="L-aspartate dehydrogenase" /protein_id="NP_252195.1" /db_xref="GeneID:879175" /translation="MLNIVMIGCGAIGAGVLELLENDPQLRVDAVIVPRDSETQVRHR LASLRRPPRVLSALPAGERPDLLVECAGHRAIEQHVLPALAQGIPCLVVSVGALSEPG LVERLEAAAQAGGSRIELLPGAIGAIDALSAARVGGLESVRYTGRKPASAWLGTPGET VCDLQRLEKARVIFDGSAREAARLYPKNANVAATLSLAGLGLDRTQVRLIADPESCEN VHQVEASGAFGGFELTLRGKPLAANPKTSALTVYSVVRALGNHAHAISI" misc_feature complement(3921273..3922073) /locus_tag="PA3505" /note="aspartate dehydrogenase; Region: PRK13303" /db_xref="CDD:237342" gene complement(3922084..3923766) /locus_tag="PA3506" /db_xref="GeneID:879176" CDS complement(3922084..3923766) /locus_tag="PA3506" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252196.1" /db_xref="GeneID:879176" /translation="MRNASQVTVGAAIAAFLEQCEVKAAFGVISIHNMPILDAFASRG NIRFVMARGEAGAANMADAYARTSGGLGVCLTSTGTAAGNAAGALVEALTAGTPLLHL TGQIETPYLDRSLAYIHEAPDQLSMLKAISKAAFRVRSVDTAISTLKLAVQTALTAPA GPVSVEIPIDIQSALINLPADLSPLPVPVARPSEQALDDLAERFAQARRPMLWLGGGA RHAGPQVQRLLAMGVGVVTSTQGRGIVPEDDARSLGAFNLNKPVERFYQSCDAMLVVG SRLRGNETLKYELKLPRPLYRADADATAEGRCYPSDFFVCGDSERVLKGLADRLEGRL SVDPAFAADLAAARNQARAQLVDGLGPYASLVEQLQALAGRNFNWVRDVTVSNSTWGN RHLNIFSPRAGVHALGGGIGQGLAMGIGAAVGAAETAPGRKTFVLAGDGGFILNLGEL ATAVQERADMLIVLMNDQGYGVIKNIQDAAYGGRRCYVDLHTPDYAQLSASLGLRHAK VSDLKDFSAVLDGALAEPGPFLLEVDMLAVGSFKSIFAGPPTNDAKTDKATA" misc_feature complement(3922111..3923754) /locus_tag="PA3506" /note="thiamine pyrophosphate-binding protein; Region: PRK07064" /db_xref="CDD:180820" gene complement(3923759..3924556) /locus_tag="PA3507" /db_xref="GeneID:879158" CDS complement(3923759..3924556) /locus_tag="PA3507" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_252197.1" /db_xref="GeneID:879158" /translation="MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGER LRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVST FAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATS AARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQL ARNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLSRHA" misc_feature complement(3923762..3924556) /locus_tag="PA3507" /note="SDR family oxidoreductase; Region: PRK07062" /db_xref="CDD:180818" gene complement(3924543..3925376) /locus_tag="PA3508" /db_xref="GeneID:879159" CDS complement(3924543..3925376) /locus_tag="PA3508" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252198.1" /db_xref="GeneID:879159" /translation="MDKSDDSQDKYIVPGLERGLLLLCEFSRKDRTLTAPELARRLKL PRSTIFRLLTTLEAMGFVTRNGNEYRLGMAVLRLGFEYLASLELTELGQPLLNRLCDE IRYPCNLVVRDGRSIVYVAKVSPSTPLSSSVNVGTRLPAHATVLGRILLQDLSLGELR ELYPEEQLEQFSPNTPRSVLELFDMVQGDRQRGFVQGEGFFEASISTVAAPVRDHSGR VIAAMGATIAAGHIDPERIEGLVSRVRSSADELSYLLDYRADGQDNVTPIFRSRPHET V" misc_feature complement(3924600..3925352) /locus_tag="PA3508" /note="DNA-binding transcriptional regulator, IclR family [Transcription]; Region: IclR; COG1414" /db_xref="CDD:441024" gene complement(3925369..3926238) /locus_tag="PA3509" /db_xref="GeneID:880020" CDS complement(3925369..3926238) /locus_tag="PA3509" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_252199.1" /db_xref="GeneID:880020" /translation="MNMAQTHTPVPNLQQRFPERLVQLADGAQLAIRECGQGPVVVLL HGIGSGSASWLHCAQRLAAGNRVIAWDAPGYGLSTPLPPARPKACDYAACLELLLDAL GVESCLLVGHSLGALMATAYAAGIGAARVRRLVLLSPARGYGAAELRDSGAQVRRQRL ENLERFGIDGMASERTARLLGRNPSEEALAWVRWNMARLNPEGYRQAVELLCGDDLLG NGQPAAPCEVHCGEDDGITTPESCGAIARQLGASFSSIPGAGHASPIEQPEVVAGRIG HAQRLSLEGTANG" misc_feature complement(3925414..3926166) /locus_tag="PA3509" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene complement(3926247..3926777) /locus_tag="PA3510" /db_xref="GeneID:880021" CDS complement(3926247..3926777) /locus_tag="PA3510" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252200.1" /db_xref="GeneID:880021" /translation="MTDLNQNAPKSWDRPEGASFEEWCNTRIARYSTRKYDWNALKFQ ADYDPRFRRAQMRYIGTGGTGVASDMNTIPSEHFTFSTMVIPAGHEGPPHLHIDVEEV FFVLRGKLKVVLEKDGERFETILTDRDVISVPPGVYREEINIGDEDALMCVMLGAKKP ITPTYPPEHPLASIKR" misc_feature complement(3926250..3926708) /locus_tag="PA3510" /note="Pseudomonas aeruginosa PA3510 and related proteins, cupin domain; Region: cupin_PA3510-like; cd02225" /db_xref="CDD:380354" gene complement(3926791..3927552) /locus_tag="PA3511" /db_xref="GeneID:879160" CDS complement(3926791..3927552) /locus_tag="PA3511" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_252201.1" /db_xref="GeneID:879160" /translation="MSQNSLLDGRRVLLTGGARGLGYAFAEAAARAGARVVIADILEE RVQRSARELAEQGLDISGLPLDLADPVSIERCVAAAVERLGGLDGLVNNASITNSGGK SCEELEIEVFDRVLQVNVRGTWLMTRACLPALRESGRGAVVNLASDTPLWGAPNLLAY SASKGALIAMTRSLARELGGDGITVNAIAPGLVEVEATEYVPAARHRLYREQRALQRG QQPADVCGAVLFALSDLSRFITGQTLPVNGGFVMP" misc_feature complement(3926794..3927546) /locus_tag="PA3511" /note="short chain dehydrogenase; Provisional; Region: PRK12939" /db_xref="CDD:183833" gene complement(3927558..3928334) /locus_tag="PA3512" /db_xref="GeneID:879161" CDS complement(3927558..3928334) /locus_tag="PA3512" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_252202.1" /db_xref="GeneID:879161" /translation="MNLSTRPLLGSLALLFLFLAAWQWGPGLLGMPEFVLPGLSRVAA EGVAMWHGAGLLEHTAITSLEIVVGFALGALLGVSIGVALGLSPTTEAMLSPYILALQ IAPKVAFAPLFVMWLGYTVYPKILIAVLIVFFPVMINVLSAIRTVDPDMINLVRAMSA SRWQIFRLVEFPSAMAALFSGLRIASTLAVIGVTVGELVGGNKGLGFLLVDAEGQGNT AGVFVAIVMLTLIGVLAYGAVVWAEKRVLHYLPKANLGTV" misc_feature complement(3927588..3928271) /locus_tag="PA3512" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]; Region: TauC; COG0600" /db_xref="CDD:440365" gene complement(3928331..3929338) /locus_tag="PA3513" /db_xref="GeneID:879966" CDS complement(3928331..3929338) /locus_tag="PA3513" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252203.1" /db_xref="GeneID:879966" /translation="MSKSLLNAALCGALFAAGLTVQAAPREVTYLLPAPPNSPAFAPW VIAREKGYYADLGLKVTFVAGKGGVDVAKQIGAGNAPVGGAIGDTPIVVRANGIPVKA VAVLGAGGVTMIATDGTAGIDSVKDLKGKTLTVMSYSDTTYYALLASMRKAGLGKSDV DIQAAGPSGVWQLFSAGRSQAMAGVPDWVVSAEDAGRQVKLLPGSEVFESMAQAILAS DEAIEKQPEVVGGVVRATLMGMRDIIADPRQAAATFAAAVPAYKGREASLERVLRLYV EHVYANQQPLGHIDPQRLDKVRRFYVSEGIVGRETPLDELYTNRFVESADLTAQHGAR P" misc_feature complement(3928409..3929317) /locus_tag="PA3513" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: TauA; COG0715" /db_xref="CDD:440479" gene complement(3929379..3930230) /locus_tag="PA3514" /db_xref="GeneID:879967" CDS complement(3929379..3930230) /locus_tag="PA3514" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_252204.1" /db_xref="GeneID:879967" /translation="MRATSLSILTSEHSLPVAAPADSRLEIEFRGVAKHFPGRGKSAA TLAVQGLDLAIRRGEVVSIIGPSGCGKSTLLNMGAGLYAPSEGEVRVGGERVSGPVRK VSFMLQKDLLMPWRSIRRNIELGLEIDGRAAGERRAIAEEMLEKCHLAGFAEHYPFQL SGGMRQRAALARTLATDPQVLFLDEPFSALDAQTKMILQQDLARMLCEQRKTALFITH DLVEAIAMSDRILVMSARPGTIVEEIEVGLPLRDNPLERRKLPEIGPLVGRLMTLLKV GESAELH" misc_feature complement(3929388..3930152) /locus_tag="PA3514" /note="ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]; Region: TauB; COG1116" /db_xref="CDD:440733" gene complement(3930743..3931816) /locus_tag="PA3515" /db_xref="GeneID:879992" CDS complement(3930743..3931816) /locus_tag="PA3515" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252205.1" /db_xref="GeneID:879992" /translation="MTKANEIETAKVKQFSARIMEDYGNTLRGAMLYIGDRLGLFKAL AHGQWVTLEELAQQTGYTTRYLREWLGSMVTGNYLAYDPQSRSYRLPAEFVPVLADED SPYFAGGIIQLSVPFVSMAPKIIEAFRCGGGCPEESFPLETWEGMERMTMPWYKHFLV QHWIPSLDGVKEKLQAGGSVLDFGCGSGLAAIMMAKAFPEAQVYGCDFHAPSIERARA NAEAAGVGDRVRFEVSDSDALAGKKFDFVTTFVVIHDATDPQQMMKDLRESTADDGTY LMVELNLSQELHENMNLFGRVMYPQSTLYCMTCSLSHGGEGLGAFMGEDRARQMAEAA GFSRFRKVPSEWPPLPALFELRP" misc_feature complement(<3931547..3931705) /locus_tag="PA3515" /note="DNA-binding transcriptional regulator, IclR family [Transcription]; Region: IclR; COG1414" /db_xref="CDD:441024" misc_feature complement(3930797..3931360) /locus_tag="PA3515" /note="SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]; Region: SmtA; COG0500" /db_xref="CDD:440266" gene complement(3931866..3933317) /locus_tag="PA3516" /db_xref="GeneID:879993" CDS complement(3931866..3933317) /locus_tag="PA3516" /EC_number="4.3.2.2" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="adenylosuccinate lyase" /protein_id="NP_252206.1" /db_xref="GeneID:879993" /translation="MDAESLEMLARSSCTAHPQSFGGAPAESSCKHEHSHIVDSKTHG GGYAGPVSRRIFCSHCRLQRWLDVEAALALAQADVGVIPPEAALEIAKAARLSAVDLQ QIADGVASTGHSLMPLLGALQRNCSPSAREYVHFGATTQDIQDTAQSLEMRDVLDETE RALDILLDRLSVLASGTRNALMVARTHSIPALPTTFGLKVAGWIDELLRHRERLGEAR KRILVVQLFGGVGTMAAFGDEAMLLLESFARRLSLDVPLAGWHVSRDRVTEFVSTLAM VTASLARIADEIRTLNRWEIGELEVGWTQQQIGSSTMPHKRNPEGCEQVVVLARLAKA QVLLALDAMILEHERDYRGTRLEWCAVADVSHYALMALSLLTDTIDGLTVHDETMART ANAYSDAICTEAFVFEMAKQLGKSSAYEIIFEITQACQRKRIPMRQALESDPRVGAVM PKETLARLFEPRTHLGMAGTIVDKVLDKVASHH" misc_feature complement(3931884..3933194) /locus_tag="PA3516" /note="prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like; Region: pCLME; cd01597" /db_xref="CDD:176469" misc_feature complement(order(3931896..3931898,3931905..3931907, 3931917..3931922,3932121..3932123,3932238..3932240, 3932244..3932246,3932250..3932255,3932271..3932285, 3932298..3932300,3932310..3932312,3932325..3932330, 3932349..3932351,3932364..3932369,3932433..3932435, 3932439..3932444,3932457..3932462,3932469..3932471, 3932490..3932495,3932502..3932504,3932511..3932516, 3932520..3932525,3932529..3932534,3932547..3932552, 3932595..3932600,3932613..3932615,3932622..3932630, 3932670..3932672,3932679..3932684,3932691..3932693, 3932700..3932702,3932715..3932717,3932721..3932723, 3932739..3932744,3932748..3932753,3932757..3932765, 3932919..3932924,3932991..3932996,3933003..3933005, 3933132..3933137,3933144..3933152)) /locus_tag="PA3516" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:176469" misc_feature complement(order(3932271..3932273,3932364..3932366, 3932370..3932375,3932631..3932633,3932757..3932762, 3932895..3932903,3932976..3932981)) /locus_tag="PA3516" /note="active site" /db_xref="CDD:176469" gene complement(3933317..3934750) /locus_tag="PA3517" /db_xref="GeneID:879063" CDS complement(3933317..3934750) /locus_tag="PA3517" /EC_number="4.3.2.2" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="adenylosuccinate lyase" /protein_id="NP_252207.1" /db_xref="GeneID:879063" /translation="MPSHITESRIHGGAYSSPAFAAIFSDTNQVRRWLDVERALAATQ AEMGIIPHEAAREIDRAAQVERFDLTQLGRESLETGHLLVPTIRALARSCEGSWGEYV HYGVTTQDILDTGLMLQVKEAWGHALGLLHSIRGHLLALALRHQHTPMVARTHGQQAL PTTFGYKVAVWVDEIDRHLARFDEARERVLVGNLTGAVGTLASFGAQGFELQRRTLAR LGLGAPSTSWHSARDRVLEVAGLLVQVSVTLGRVANEIYHLQRSEIDEVREGSRPGQV GSSTMPHKRNPSSVDLVSALSRLVRAQMVALTDAAFQLHERDGTAWRIEWAALPELFV YAGALLTRMEAVLAEGLEVREERMRANLDLLGGLILSERVMLALAGQFGKQTAHELLH EITQASQRQGVPFREALLGQPRLRGCFSAEALEELLDPVGYVGLAAEMVDLVADKPRT GASGDRPEGAASSQGNPGQSQYVMEDR" misc_feature complement(3933410..3934723) /locus_tag="PA3517" /note="prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like; Region: pCLME; cd01597" /db_xref="CDD:176469" misc_feature complement(order(3933422..3933424,3933431..3933433, 3933443..3933448,3933647..3933649,3933767..3933769, 3933773..3933775,3933779..3933784,3933800..3933814, 3933827..3933829,3933839..3933841,3933854..3933859, 3933878..3933880,3933893..3933898,3933962..3933964, 3933968..3933973,3933986..3933991,3933998..3934000, 3934019..3934024,3934031..3934033,3934040..3934045, 3934049..3934054,3934058..3934063,3934076..3934081, 3934124..3934129,3934142..3934144,3934151..3934159, 3934199..3934201,3934208..3934213,3934220..3934222, 3934229..3934231,3934244..3934246,3934250..3934252, 3934268..3934273,3934277..3934282,3934286..3934294, 3934448..3934453,3934520..3934525,3934532..3934534, 3934661..3934666,3934673..3934681)) /locus_tag="PA3517" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:176469" misc_feature complement(order(3933800..3933802,3933893..3933895, 3933899..3933904,3934160..3934162,3934286..3934291, 3934424..3934432,3934505..3934510)) /locus_tag="PA3517" /note="active site" /db_xref="CDD:176469" gene complement(3934781..3935767) /locus_tag="PA3518" /db_xref="GeneID:879064" CDS complement(3934781..3935767) /locus_tag="PA3518" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252208.1" /db_xref="GeneID:879064" /translation="MNTRNFSLPQLQNLPIEEARIVADALAVHATSRQIDSAASKLAA LAEAGLKGDRQAYAAYQQLLYVLSLSDDVATAQTRRWLARAIYRVEERFMPAADLSRA LSEEDFQKRLEQEIAAQSRERHPMSQYVFSGSASRAQLQVFLRHQWFRTFRLYRDAAD LLVNLTDVDEAAALARYLYGELGEEDEKGSHPRLLAKLLEAIGLEADFQAVSTMPEEI AYLNNRARAFRHAEVGWGLAVFYITELVVPGNHEKLYRALLQAGLSEDQAEYYKVHIS LVPPRAKREWQLIARRIPDVQFQNAFLTSLSQHFRVERAYYDAIWEEMQSVK" misc_feature complement(3935489..3935764) /locus_tag="PA3518" /note="Haem-oxygenase-associated N-terminal helices; Region: HOASN; pfam14515" /db_xref="CDD:405239" misc_feature complement(3934790..3935464) /locus_tag="PA3518" /note="Pyrroloquinoline quinone (PQQ) biosynthesis protein C [Coenzyme transport and metabolism]; Region: PqqC; COG5424" /db_xref="CDD:444176" gene complement(3935800..3936837) /locus_tag="PA3519" /db_xref="GeneID:878876" CDS complement(3935800..3936837) /locus_tag="PA3519" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252209.1" /db_xref="GeneID:878876" /translation="MTSNPLQQCCSSSSDMNIRSQRTMSEPARNASALLAEALKPGAS LDQITLALEAILAVTAKGLGGDASAYAQYQALLLELHVGSDPHTEPTRRWMASQVYLV EDRFAPEPAGFSAVPVEEFRKKVDAEIEARSRVRHPMSVHLFQGTPPVEDVRFFLEHH WVRSYNFYSLLAELAFRFENIEDASVFYRNLYGEAGAETPERSHPALLSHLMTYFDIP LRIDFPALHPLEKAYLNNRIRCVRHTDVAWGLALLYAVESVSCVNHRRIYELLQRLGV PEQPSEFHRLHGTQDEIDTEEMWALIAKFAPSEDFQRKFMQSLARHFEINRAYFDLLW EQMQANSLAMA" misc_feature complement(3936520..3936780) /locus_tag="PA3519" /note="Haem-oxygenase-associated N-terminal helices; Region: HOASN; pfam14515" /db_xref="CDD:405239" misc_feature complement(3935818..3936495) /locus_tag="PA3519" /note="Pyrroloquinoline quinone (PQQ) biosynthesis protein C [Coenzyme transport and metabolism]; Region: PqqC; COG5424" /db_xref="CDD:444176" protein_bind complement(3937135..3937147) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 3937175..3937187 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(3937238..3937432) /locus_tag="PA3520" /db_xref="GeneID:878877" CDS complement(3937238..3937432) /locus_tag="PA3520" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252210.1" /db_xref="GeneID:878877" /translation="MFSFHIPNMTCGGCAKTVTRILHGVDPQARVETDPPRREARVES TLDKHAFLEALSEAGYPEGR" misc_feature complement(3937250..3937432) /locus_tag="PA3520" /note="Copper chaperone CopZ [Inorganic ion transport and metabolism]; Region: CopZ; COG2608" /db_xref="CDD:442020" gene complement(3938020..3939495) /locus_tag="PA3521" /db_xref="GeneID:878905" CDS complement(3938020..3939495) /locus_tag="PA3521" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252211.1" /db_xref="GeneID:878905" /translation="MKPYLRSSLSALILLGGCAAVGPDYAPPSASAPASFGAMPAGID GSGVEIEWWRGFDEPALESLIQRALAANLDIALAGARLDEAKALLRENREEFLPRGGP AFDYQARRRGEVETPAGQQRDIETYRGALDASWEIDLFGRVRRSVEAAEAQAGSREAL LRNVQASVAATVAMSWFQLQGIEAELAVVHDIAGNQRDSLEMVERLVSAGSAHEFDRL RAEALLHNVEAAVPDLERRRAATRNALAVLLAEAPQAFSPPVARASGERLTLRTLGVG DPAGLLARRADIAAAERNLAAATARIGVETAGLYPQVEVRGSIGLVAGNLDALDESGT SFNVLNPVIRWALLDRGRVWARIAASEARAQEALILYDRTVLRALQETDDAFNGYGAA ADRLRLRLLEATANREAARLARERFVQGDGEYLDVLEAERSDYLSRRALSIARTEQRL AVVGIYKALGGGWEACAGARRCGVATDDTSPGVARQRDSRS" misc_feature complement(3938110..3939471) /locus_tag="PA3521" /note="efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; Region: outer_NodT; TIGR01845" /db_xref="CDD:273830" gene complement(3939492..3942653) /locus_tag="PA3522" /db_xref="GeneID:878906" CDS complement(3939492..3942653) /locus_tag="PA3522" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux transporter" /protein_id="NP_252212.1" /db_xref="GeneID:878906" /translation="MTFPRFFIDRPIFAIVLSVLMMIGGIVSFFQLPLSEYPAVTPPT VQVTTAYPGANPDVIAQTVATPLEQAITGVEGMLYMSSQSATDGRMILTITFDQHIDP DMAQIQVQNRVSRVLSRLPDEVQRQGVVTQKTSPDILMVVHLLSPEQRYDPLYISNYA YLQVRDELLRLPGISDVVVWGAGEYSMRLWLDPDLIAARGLTAGEVIAAVREQNVQVA AGAVGQAPDSTAAFQVTVNTLGRLSDEEQFGDIIVRTGADGQVTRLRDVARIEMGGDA YALRSLLDGEPAVALQIIQSPGANALDTAEAVRATVARLEGNFPAGLSARIAYDPTVF VRASLQTVATTLLEAILLVVVVVVLFLRSWRASLIPLMAVPVSLVGTFAVMHLMGFSL NTLSLFGLVLSIGIVVDDAIVVVENVERHIENGEPPLQAARRAMDEVTGPIMAITSVL AAVFIPTAFLSGLQGEFYRQFALTIAISTILSALNSLTLSPALAGLLLRPRPAGGAVA GRFQRLLQVLGRPLRNAPEAYGNAVRKVVRVSGLALVVYGGLLGLTWVGFQAVPPGFV PMQDKYYLVGIAQLPNGASLERTDAVVRQMSRIGLDEPGVESVVAFPGLSVNGFVNVP NAAVMFFMLDPFESRTSADLGALAIAGRLQARFASIPDGFLGVFPPPPVPGLGTIGGF KMQVEDRGGAGLEALARQTQVLMMKATESGQLGGLMTSFDINAPQLEVVVDRTKVKSQ GVRLADVFEALQVYLGSLYINDFNRFGRTYKVTAQADAPHRMQAEAIGRLQVRNAAGA MLPLSSFVTVTPSSGPDRVIHYNGYPSADISGGALPGVSSGQAVALMERLAGEVLPEG MTFEWTDLTYQQKLAGNSALFIFPLCVLLAYLILAAQYNSWLLPLAVLLIVPMCLLSA IAGVWLVGGDNNVFVQIGLVVLVGLAAKNAILIVEFARTLEAEGARALEAVVEACRLR LRPILMTSLAFIAGVVPLVMASGAGAEMRQAMGVAVFAGMLGVTLFGLFLTPVFYVLV RALAARLERRAGGSLAHLEGGRP" misc_feature complement(3939543..3942653) /locus_tag="PA3522" /note="Multidrug efflux pump subunit AcrB [Defense mechanisms]; Region: AcrB; COG0841" /db_xref="CDD:440603" gene complement(3942650..3943807) /locus_tag="PA3523" /db_xref="GeneID:879790" CDS complement(3942650..3943807) /locus_tag="PA3523" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux membrane fusion protein" /protein_id="NP_252213.1" /db_xref="GeneID:879790" /translation="MNLRHFIRITATLGVAALIAGCGESAPPGAASAPPSVPVAEVVV RPVTPYAEFTGSLTAVEQVELRPRVAGYIQDVTVPEGRLVEKGQQLFLIDPRVFKAAQ DAARARLREAEAAALLARTEHERAELLYARKVVARERLDSAIASRNASKAQVDAARAA LDAAQLDLGFTRVTAPIGGRVGHIQVTEGNYVTNGVTALTSIVSVDPLYVYFDVDERT YLQALAPTRGREGEQAPRVKVALLTDESYGRSSRLDFLANAADRGTGTVRVRAVVDNP DGQLTPGLFAKVRLETGKPRAQVLVADHSIGTDQGRRYVLVVDEGNKTQYRPVELGPM VDGLRVVRQGLQPGERIVVKGLVRPDMQITPRLAEIDGTPVDLSKTVGAAQ" misc_feature complement(3942701..3943684) /locus_tag="PA3523" /note="Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms]; Region: AcrA; COG0845" /db_xref="CDD:440606" gene 3944184..3944570 /gene="gloA1" /locus_tag="PA3524" /db_xref="GeneID:879791" CDS 3944184..3944570 /gene="gloA1" /locus_tag="PA3524" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="lactoylglutathione lyase" /protein_id="NP_252214.1" /db_xref="GeneID:879791" /translation="MRILHTMIRVGNIDRSIDFYTRVLGMTLLRKNDYPDGQFTLAFV GYGNEADSAVIELTHNWGVDAYEIGTGYGHIAIEVDDAYQACDDIRYNGGQVTREAGP MKHGTTVIAFVTDPDGYKIELIQKSS" misc_feature 3944187..3944567 /gene="gloA1" /locus_tag="PA3524" /note="vicinal oxygen chelate (VOC) family; Region: VOC; cl14632" /db_xref="CDD:472697" misc_feature order(3944190..3944210,3944253..3944255,3944319..3944321, 3944340..3944351,3944379..3944390,3944394..3944417, 3944421..3944423,3944538..3944540,3944547..3944549, 3944553..3944555) /gene="gloA1" /locus_tag="PA3524" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319965" misc_feature order(3944196..3944198,3944208..3944210,3944283..3944285, 3944298..3944300,3944304..3944306,3944349..3944351, 3944355..3944357,3944361..3944363,3944403..3944405, 3944475..3944477,3944511..3944513,3944517..3944519, 3944541..3944543,3944547..3944549) /gene="gloA1" /locus_tag="PA3524" /note="active site" /db_xref="CDD:319965" misc_feature order(3944208..3944210,3944283..3944285,3944298..3944300, 3944304..3944306,3944355..3944357,3944361..3944363, 3944475..3944477,3944511..3944513,3944517..3944519, 3944541..3944543) /gene="gloA1" /locus_tag="PA3524" /note="glutathione binding site [chemical binding]; other site" /db_xref="CDD:319965" gene complement(3944662..3945879) /gene="argG" /locus_tag="PA3525" /db_xref="GeneID:878872" CDS complement(3944662..3945879) /gene="argG" /locus_tag="PA3525" /EC_number="6.3.4.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="argininosuccinate synthase" /protein_id="NP_252215.1" /db_xref="GeneID:878872" /translation="MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEE VEPARAKARAMGVKEIYIDDLREEFVRDFVYPMFRANTVYEGEYLLGTSIARPLIAKR LIEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDY AEKHGIPIERHGKKKSPYSMDANLLHISYEGGVLEDTWTEHEEDMWKWTASPENAPDT PTYIELTYRKGDIVAIDGKDMTPAEVLTELNRVGGINGIGRLDIVENRYVGMKSRGCY ETPGGTIMLKAHRAIESITLDREVAHLKDELMPKYASLIYTGYWWSPERLMLQQMIDA SQVNVNGVVRLKLYKGNVVVVGRKSDDSLFDANIATFEEDGGAYNQADAAGFIKLNAL RMRIAANKGRTLS" misc_feature complement(3944674..3945873) /gene="argG" /locus_tag="PA3525" /note="argininosuccinate synthase; Provisional; Region: PRK00509" /db_xref="CDD:234785" protein_bind complement(3945935..3945976) /experiment="Beta-gal reporter assay [PMID: 15175299]" /experiment="DNA-array expression analysis [PMID: 15175299]" /experiment="EMSA [PMID: 15175299]" /note="Transcription factor binding site for NP_249584.; Evidence of regulation for: PA3525" /bound_moiety="ArgR" gene complement(3945997..3946962) /locus_tag="PA3526" /db_xref="GeneID:878873" CDS complement(3945997..3946962) /locus_tag="PA3526" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252216.1" /db_xref="GeneID:878873" /translation="MQPRLLLLPFLLSSLPALAVTFQTRLESVEWKVEGDQFECRLSQ PVANFGVGEFVRRAGEQATFRLKPEAQWLGRGSATLLAAAPPWRPGQGDINLGQVSIG SGEVPFNSSQQQAGRLLTGLLEGRSPLVRHRTWQGDRLEVRLLPARFASVYSQYQACI AKLLPVNFDQVKLAQVGFPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDNS GNRLTNRDLSRRRALAVQEYLKSNGVPESQINVRFYGERYPLVANNSAANRARNRRVT VHLSREAVVEPATEAPKAEDKPAPPAAEPAAPKPPAASLQGKPTV" misc_feature complement(3946468..3946899) /locus_tag="PA3526" /note="MotY N-terminal domain; Region: MotY_N; pfam18393" /db_xref="CDD:465741" misc_feature complement(3946126..3946440) /locus_tag="PA3526" /note="Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; Region: OmpA_C-like; cd07185" /db_xref="CDD:143586" misc_feature complement(order(3946144..3946146,3946156..3946158, 3946282..3946284,3946291..3946296,3946306..3946308, 3946315..3946320,3946420..3946425)) /locus_tag="PA3526" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene 3947095..3948141 /gene="pyrC" /locus_tag="PA3527" /db_xref="GeneID:879809" CDS 3947095..3948141 /gene="pyrC" /locus_tag="PA3527" /EC_number="3.5.2.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="dihydroorotase" /protein_id="NP_252217.1" /db_xref="GeneID:879809" /translation="MSDRLTLLRPDDWHIHLRDGAALANTVGDAARTFGRAIVMPNLV PPVRNAAEADAYRQRILAARPAASRFEPLMVLYLTDRTSTEEIRTAKASGFVHAAKLY PAGATTNSDSGVTRIDNIFEALEAMAEVGMPLLVHGEVTRAEVDVFDREKQFIDEHLR RVVERFPTLKVVFEHITTGDAAQFVREAPANVGATITAHHLLYNRNHMLVGGIRPHFY CLPILKRNTHQEALLDAAVSGNPKFFLGTDSAPHARHAKEAACGCAGCYSAYAAIELY AEAFEQRNALDKLEGFASLHGPDFYGLPRNTDRITLVREEWQAPASLPFGDFDVVPLR AGETLRWKLLEAGA" misc_feature 3947095..3948126 /gene="pyrC" /locus_tag="PA3527" /note="Dihydroorotase [Nucleotide transport and metabolism]; Region: PyrC; COG0418" /db_xref="CDD:440187" gene 3948138..3948812 /gene="rnt" /locus_tag="PA3528" /db_xref="GeneID:879810" CDS 3948138..3948812 /gene="rnt" /locus_tag="PA3528" /EC_number="3.1.13.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribonuclease T" /protein_id="NP_252218.1" /db_xref="GeneID:879810" /translation="MSEDNFDDEFDGSLPSGPRHPMARRFRGYLPVVVDVETGGFNSA TDALLEIAATTVGMDEKGFLFPEHTYFFRIEPFEGANIEPAALEFTGIKLDHPLRMAV QEEAALTEIFRGIRKALKANGCKRAILVGHNSSFDLGFLNAAVARTGIKRNPFHPFSS FDTATLAGLAYGQTVLAKACQAAGMEFDNREAHSARYDTEKTAELFCGIVNRWKEMGG WMDDDD" misc_feature 3948201..3948800 /gene="rnt" /locus_tag="PA3528" /note="ribonuclease T; Region: RNaseT; TIGR01298" /db_xref="CDD:188129" misc_feature order(3948210..3948212,3948216..3948218,3948540..3948542, 3948609..3948623,3948630..3948632,3948639..3948644, 3948651..3948656,3948774..3948776) /gene="rnt" /locus_tag="PA3528" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:99837" misc_feature order(3948240..3948251,3948255..3948257,3948531..3948536, 3948540..3948548,3948714..3948716,3948729..3948731) /gene="rnt" /locus_tag="PA3528" /note="putative active site [active]" /db_xref="CDD:99837" misc_feature order(3948240..3948251,3948255..3948257,3948531..3948536, 3948540..3948545,3948714..3948716,3948729..3948731) /gene="rnt" /locus_tag="PA3528" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:99837" misc_feature order(3948240..3948242,3948246..3948248,3948546..3948548, 3948714..3948716,3948729..3948731) /gene="rnt" /locus_tag="PA3528" /note="catalytic site [active]" /db_xref="CDD:99837" gene complement(3948991..3949593) /locus_tag="PA3529" /db_xref="GeneID:879942" CDS complement(3948991..3949593) /locus_tag="PA3529" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="peroxidase" /protein_id="NP_252219.1" /db_xref="GeneID:879942" /translation="MSVLVGKKAPDFNVAAVLGNGEIVESFTLSEAIKGKYGLVFFYP LDFTFVCPSELIALDHRIPEFQARNVEVIGVSIDSHFTHNAWRNTPVDKGGIGAVKYT LAADTKHEIAKAYDVESDGGVAFRGAFLIDKEGVVRSQIVNDLPLGRNMDELLRLVDA LQFHEEHGEVCPANWKKGDKGMTASPEGVAKYLAENASKL" misc_feature complement(3949000..3949593) /locus_tag="PA3529" /note="Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin) [Defense mechanisms]; Region: AhpC; COG0450" /db_xref="CDD:440219" gene 3949853..3950074 /locus_tag="PA3530" /db_xref="GeneID:879943" CDS 3949853..3950074 /locus_tag="PA3530" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252220.1" /db_xref="GeneID:879943" /translation="MYVCLCQGVTDNQIRDAIYEGCCSYREVREATGVGTQCGKCACL AKQVVRETLNDLQSAQPVPAFGTTAFVAA" misc_feature 3949853..3950011 /locus_tag="PA3530" /note="bacterioferritin-associated ferredoxin (BFD) [2Fe-2S]-binding domain; Region: Fer2_BFD; cd19945" /db_xref="CDD:381078" misc_feature order(3949853..3949858,3949865..3949870,3949874..3949876, 3949880..3949882,3949961..3949966,3949970..3949972, 3949979..3949981) /locus_tag="PA3530" /note="BFR interface [polypeptide binding]; other site" /db_xref="CDD:381078" gene 3950284..3950760 /gene="bfrB" /locus_tag="PA3531" /db_xref="GeneID:879026" CDS 3950284..3950760 /gene="bfrB" /locus_tag="PA3531" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bacterioferritin" /protein_id="NP_252221.1" /db_xref="GeneID:879026" /translation="MKGDKKVIQHLNKILGNELIAINQYFLHSRMWNDWGLKRLGAHE YHESIDEMKHADKLIERILFLEGLPNLQDLGKLLIGENTQEMLQCDLNLELKATKDLR EAIVHCEQVHDYVSRDLLKDILESEEEHIDYLETQLGLIQKVGLENYLQSHMHEDD" misc_feature 3950290..3950745 /gene="bfrB" /locus_tag="PA3531" /note="Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]; Region: Bfr; COG2193" /db_xref="CDD:441796" gene complement(3950827..3951978) /locus_tag="PA3532" /db_xref="GeneID:879027" CDS complement(3950827..3951978) /locus_tag="PA3532" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252222.1" /db_xref="GeneID:879027" /translation="MSEVNPRQGRLACIYFFAMAGLVIGNLMGRIPALKEQTQLDERA LGQALLGVGVGALTAFPLSGFLVQRIGSRSVVIGGCLIMLLVFPLLGLSQGWWQLALA FYVLGVSFAGMDVAMNIQAVDVERLLGKPCMSMLHGMYSLGCLVGALSAAALAGLTPF WHFLILTALGLLSLPFFVRALLPPDPSKAGARKGGGFTLPPRALLGLGLLILCAFVSE GGVADWSALFLHSVLDASERVAALGFAAFSAAMVVGRLFGDRLRGRIDDAPLLRGLGS LATLGMLVALFSPWPALSIAGFGVVGLGLSVMVPIVISAAGNQPGIDPVIGVAAVSTV GYGGLLMGPPLIGLLAHEIGLRWALLVLVGLCLLLALRADLVRRRPRSA" misc_feature complement(3950908..3951951) /locus_tag="PA3532" /note="Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters; Region: MFS_MosC_like; cd17393" /db_xref="CDD:340951" misc_feature complement(order(3950959..3950961,3950968..3950973, 3950980..3950985,3950992..3950994,3951040..3951042, 3951052..3951054,3951064..3951069,3951214..3951216, 3951226..3951228,3951310..3951312,3951319..3951327, 3951334..3951339,3951346..3951348,3951547..3951549, 3951556..3951561,3951568..3951570,3951625..3951627, 3951634..3951642,3951646..3951651,3951799..3951801, 3951895..3951897,3951904..3951909,3951916..3951921)) /locus_tag="PA3532" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340951" gene complement(3952061..3952387) /locus_tag="PA3533" /db_xref="GeneID:880011" CDS complement(3952061..3952387) /locus_tag="PA3533" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252223.1" /db_xref="GeneID:880011" /translation="MDIIETIKEQIANNPILLYMKGSPNAPQCGFSSRAAQVLMACGE KFAYVDILQNPEIRANLPKYANWPTFPQLWVNGELVGGSDILAEMFEKGELQTLVKDA AAKANA" misc_feature complement(3952076..3952387) /locus_tag="PA3533" /note="Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]; Region: GrxD; COG0278" /db_xref="CDD:440047" gene complement(3952500..3954608) /locus_tag="PA3534" /db_xref="GeneID:880012" CDS complement(3952500..3954608) /locus_tag="PA3534" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_252224.1" /db_xref="GeneID:880012" /translation="MSKTLHYRACHLCEAICGLAIETESDEGGVPRIRSIKGDPQDSF SRGHVCPKAVALQDIQDDPDRLRQPLRRVGSEWQPIGWDEAFALVASRLGEIRERHGN DAVAVYQGNPSVHNYGLMTHSNYFLGLLKTRNRFSATSVDQLPHHLVSQQMYGHGLLI PIPDIDHTDFMLVLGGNPLASNGSIMTVPDVEKRLKALKARGGRLVVVDPRRSETAAI ADRHLFIRPGQDAALLLGILNTLFEENLGRPTPLPVDGLERVREAVAVFDAESMSARC GVPAESIRQLARDFAAAERAVCYGRMGVSTQAFGTLCQWLVQLINLVTGNLDRVGGAL CTSPALDLVASTSGGHFGRWRSRVSGLPEYGGELPVAALAEEILGEGEGQVRALVTVA GNPVLSTPNGRRLEQALDGLEFMLSIDLYINETTRYADLILPPTAPLEHDHYDTTFNV FAVRNVTRFNEAVLPRPEGALHDWEIFVGLARAFAARNGLELKPTLEPQQMIDLGLRA GAYGDRSEHRLSLATLREHPHGIDLGPLRPNLAPRLKTADQRIQAAPPLFVDDLQRFA AQPLPASDQLLLIGRRHVRSNNSWMHNYHRLVKGKPRHQLLMHPRDLEGRGLVDGQRV RVRSRVGSVEVEVAASSEMMPGVVSLPHGWGHARPGVQLAIARAQAGVSANDLTDERH LDLLSGNAALNGLPVEVEAA" misc_feature complement(3952914..3954590) /locus_tag="PA3534" /note="The MopB_1 CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. These members belong to...; Region: MopB_1; cd02762" /db_xref="CDD:239163" misc_feature complement(order(3954459..3954461,3954558..3954560, 3954570..3954572,3954579..3954581)) /locus_tag="PA3534" /note="putative [Fe4-S4] binding site [ion binding]; other site" /db_xref="CDD:239163" misc_feature complement(order(3953286..3953288,3953301..3953306, 3953340..3953342,3953349..3953357,3953427..3953435, 3953589..3953594,3953697..3953708,3953919..3953921, 3953979..3953987,3954066..3954071,3954078..3954080, 3954084..3954089,3954192..3954200,3954204..3954206, 3954453..3954455)) /locus_tag="PA3534" /note="putative molybdopterin cofactor binding site [chemical binding]; other site" /db_xref="CDD:239163" misc_feature complement(3952503..3952883) /locus_tag="PA3534" /note="The MopB_CT_1 CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. This CD is of the...; Region: MopB_CT_1; cd02782" /db_xref="CDD:239183" misc_feature complement(order(3952521..3952526,3952584..3952586, 3952653..3952655,3952845..3952856,3952860..3952874)) /locus_tag="PA3534" /note="putative molybdopterin cofactor binding site; other site" /db_xref="CDD:239183" protein_bind 3954757..3954772 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA3535" /bound_moiety="LasR" gene 3954907..3957894 /locus_tag="PA3535" /db_xref="GeneID:878979" CDS 3954907..3957894 /locus_tag="PA3535" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="serine protease" /protein_id="NP_252225.1" /db_xref="GeneID:878979" /translation="MTDDHSFRPRPTSLSAALLLGAWIAQPATAAYVEAGRPGDPASW RSAEYQQDWGLERMRADQAYAAGIDGQGVKIGEMDSGFDPSHPDTPASRYQPVTASGT YVDGTPFSVSGAMNGNNDSHGTHVGGTLGASRDGVGMHGVAYAAQVYVANTNQNDSFL FGPTPDPNYFKAAYQALADAGVRAINNSWGSQPKDVSYETLDGLHAAYAQHYGRSTWL DAAAGVSRQGVINVFSAGNSGYANASVRSALPYFQPDLEGHWLAVSGLDQQNGQRYNR CGIAKYWCITTPGRLINSTMPGGGYANKSGTSMAAPHATGALALVMQRYPYLNNEQAL QVLLTTATQLDGTPTGAPTDTVGWGVPDLGRAMHGPGQLLGRFEANLPAGLRDEWSNP ISDSALLQRQAEDAAEHAAWQRTLKDKGWENGLPAGASQQERTDYAIGMARDQAAAQR QYQGSLVKAGAGSLVLSGDSTYRGPTLVDGGLLSVDGSLLSAVEVNAGGTLGGSGRIG GLLARSGGTVAAGNSIGTLEVAGDLRFESGSTYAVELSESASDRIVASGKASIAGGNV TLAMENSPDLLSQSQVESLVGRRYDILDAAGGIDGRFDAVLPNYLFLGGTLDYAANAI RLDIGRNGTTLASVAQTPNQAAVAGAVETLGAGNPVYESLLLSENAATAQRAFQQLSG EIYPALAGLLLNDSRYLRDSVGERLRQTSDGEAGGEAPEGWFKALGSWGKSADGSHGS EGYRHSVGGFLLGVDSQVASDTRLGLVAGYSNSSLNMDSSLQSSASIDSYHLGAYLGR QLQQWRLSLGAAHAWHRAEVKRDLQYGAVAGKQKAKLDAQSSQLFAEAAYALGWRSLE LEPFAGLAYVHVASDDFRERGSAAALEGGDDNLDAAFTTLGLRAKRHFELDAGRRLAL SGTLGWRHNLSDTTPQRHLAFASGSQPFSVESVALSRDAALLGVDASLAVNREVSVRL GYNGLLGSREKDHGVGLAVDWRF" misc_feature 3954940..3957891 /locus_tag="PA3535" /note="Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown]; Region: COG4625" /db_xref="CDD:443664" misc_feature 3955111..3955932 /locus_tag="PA3535" /note="Peptidase S8 family domain in Autotransporter serine proteases; Region: Peptidases_S8_Autotransporter_serine_protease_like; cd04848" /db_xref="CDD:173794" misc_feature order(3955141..3955143,3955270..3955272,3955468..3955476, 3955615..3955617,3955828..3955830) /locus_tag="PA3535" /note="putative active site [active]" /db_xref="CDD:173794" misc_feature order(3955141..3955143,3955270..3955272,3955828..3955830) /locus_tag="PA3535" /note="catalytic triad [active]" /db_xref="CDD:173794" misc_feature <3956266..>3956532 /locus_tag="PA3535" /note="fibronectin-binding autotransporter adhesin ShdA; Region: PRK15319" /db_xref="CDD:185219" gene complement(3958288..3958755) /locus_tag="PA3536" /db_xref="GeneID:878980" CDS complement(3958288..3958755) /locus_tag="PA3536" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252226.1" /db_xref="GeneID:878980" /translation="MEEAGFGPGRSNMHTGETLAAAPPARPLRQSRLGGLSLFLALAG VAIALAVMALALGERIDLSDENHLLGLFAALLAVFAVSTCGLVLGLAGLLRRSRKRHL ALAGIVLNLSCLLWGWHALSTAAAAILMVLGQTGLSFLSALAVLFGMIFFRQA" gene 3959033..3959950 /gene="argF" /locus_tag="PA3537" /db_xref="GeneID:878793" CDS 3959033..3959950 /gene="argF" /locus_tag="PA3537" /EC_number="2.1.3.3" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="ornithine carbamoyltransferase" /protein_id="NP_252227.1" /db_xref="GeneID:878793" /translation="MSVRHFLSFMDYSPEELIGLIRRGSELKDLRNRGVLYEPLKSRV LGMVFEKASTRTRLSFEAGMIQLGGQAIFLSPRDTQLGRGEPIGDSARVMSRMLDGVM IRTFAHATLTEFAAHSKVPVINGLSDDLHPCQLLADMQTFHEHRGSIQGKTVAWIGDG NNMCNSYIEAALKFDFQLRVACPEGYEPKAEFVALAGDRLRVVRDPREAVAGAHLVST DVWASMGQEDEAAARIALFRPYQVNAALLDGAADDVLFMHCLPAHRGEEISEELLDDP RSVAWDQAENRLHAQKALLELLIEHAHYA" misc_feature 3959033..3959929 /gene="argF" /locus_tag="PA3537" /note="ornithine carbamoyltransferase; Provisional; Region: PRK00779" /db_xref="CDD:234835" gene 3959955..3961037 /locus_tag="PA3538" /db_xref="GeneID:879008" CDS 3959955..3961037 /locus_tag="PA3538" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_252228.1" /db_xref="GeneID:879008" /translation="MSHDLLLNLKDLACGYASQKVVQDLDLHLNAGDIGCLLGPSGCG KTTTLRAIAGFEPVLAGQIELGGEVISRPGFTLAPEKRRIGMVFQDYALFPHLSVADN VGFGIRKHPQRERLVRELLELVKLDHLAARHPHELSGGQQQRVALARALAPEPLLLLL DEPFSNLDVELRRSLSQEVREILKARGTSAILVTHDQEEAFAVCDHIGVFKEGHLEQW DTPYNLYHEPLTPFVASFVGQGYFIRGQLLSPDTVQTELGVIRGNRAYSLPSGSAVDV LLRPDDLVHAPQGELKARIVGKTFLGAATLYRLQLPTGTQLESIFPSHADHQPGDDVG IRVAADHLVVFAARGSVAAHLAPVQA" misc_feature 3959970..3960995 /locus_tag="PA3538" /note="ABC-type Fe3+/spermidine/putrescine transport systems, ATPase component [Amino acid transport and metabolism]; Region: PotA; COG3842" /db_xref="CDD:443052" gene 3961144..3961923 /locus_tag="PA3539" /db_xref="GeneID:879009" CDS 3961144..3961923 /locus_tag="PA3539" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252229.1" /db_xref="GeneID:879009" /translation="MLMVISPAKTLDYETPPVTHRFTQPQYLDHAQELIQQLRQLTPL QISELMKLSDKLAGLNAARYASWHPEFTPENAKQALLAFKGDVYTGLNAEDFGEDDFA FAQDHLRMLSGLYGVLRPLDLMQPYRLEMGTRLANARGKDLYAFWGERISQWLNEALA AQGDDVLLNLASNEYFGAVKRKALQARVIDTEFKDLKNGQYKIISFYAKKARGMMARY VIRERLRDPAGLKDFNAHGYYFSAEQSGPDQLVFLRDAPQD" misc_feature 3961144..3961914 /locus_tag="PA3539" /note="peroxide stress protein YaaA; Region: PRK02101" /db_xref="CDD:234999" protein_bind 3961980..3962002 /experiment="DNAse footprinting [PMID: 1907266]" /experiment="EMSA [PMID: 1907266]" /note="Transcription factor binding site for NP_253948." /bound_moiety="AlgR" protein_bind 3961988..3962001 /experiment="DNAse footprinting [PMID: 1900366]" /experiment="EMSA [PMID: 1900366]" /note="Transcription factor binding site for NP_253948. Originally reported in Pseudomonas aeruginosa 8830" /bound_moiety="AlgR" protein_bind 3962059..3962079 /experiment="'DNAse footprinting [PMID: 1907266, 1900366]'" /experiment="'EMSA [PMID: 1907266, 1900366]'" /note="Transcription factor binding site for NP_253948." /bound_moiety="AlgR" protein_bind 3962165..3962186 /experiment="Fluorescence anisotropy [PMID: 22511872]" /experiment="Site directed mutagenesis [PMID: 22511872]" /note="Transcription factor binding site for NP_252075. Originally reported in Pseudomonas aeruginosa FRD1" /bound_moiety="AmrZ" protein_bind complement(3962324..3962336) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="'Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3546, PA3544, PA3542, PA3541, PA3540'" /bound_moiety="AmrZ" protein_bind 3962349..3962361 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="'Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3546, PA3544, PA3542, PA3541, PA3540'" /bound_moiety="AmrZ" protein_bind 3962357..3962369 /experiment="CAT reporter gene assays [PMID: 8051019]" /experiment="Copper-phenanthroline footprinting [PMID: 8051019]" /experiment="EMSA [PMID: 8051019]" /experiment="Site directed mutagenesis [PMID: 8051019]" /note="Transcription factor binding site for NP_251428. Originally reported in Pseudomonas aeruginosa FRD1; Evidence of regulation for: PA3540" /bound_moiety="IHF" protein_bind 3962360..3962372 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="'Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3546, PA3544, PA3542, PA3541, PA3540'" /bound_moiety="AmrZ" protein_bind complement(3962375..3962387) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="'Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3546, PA3544, PA3542, PA3541, PA3540'" /bound_moiety="AmrZ" protein_bind 3962378..3962390 /experiment="CAT reporter gene assays [PMID: 8051019]" /experiment="Copper-phenanthroline footprinting [PMID: 8051019]" /experiment="EMSA [PMID: 8051019]" /experiment="Site directed mutagenesis [PMID: 8051019]" /note="Transcription factor binding site for NP_251428. Originally reported in Pseudomonas aeruginosa FRD1; Evidence of regulation for: PA3540" /bound_moiety="IHF" protein_bind 3962424..3962438 /experiment="DNAse footprinting [PMID: 10792721]" /experiment="EMSA [PMID: 10792721]" /experiment="Site directed mutagenesis [PMID: 10792721]" /note="Transcription factor binding site for NP_417669. Originally reported in Pseudomonas aeruginosa PAO381; Evidence of regulation for: PA3540" /bound_moiety="RpoN" protein_bind 3962536..3962548 /experiment="CAT reporter gene assays [PMID: 8051019]" /experiment="Copper-phenanthroline footprinting [PMID: 8051019]" /experiment="EMSA [PMID: 8051019]" /experiment="Site directed mutagenesis [PMID: 8051019]" /note="Transcription factor binding site for NP_251428. Originally reported in Pseudomonas aeruginosa FRD1; Evidence of regulation for: PA3540" /bound_moiety="IHF" gene 3962825..3964135 /gene="algD" /locus_tag="PA3540" /db_xref="GeneID:879004" CDS 3962825..3964135 /gene="algD" /locus_tag="PA3540" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="GDP-mannose 6-dehydrogenase AlgD" /protein_id="NP_252230.1" /db_xref="GeneID:879004" /translation="MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKS PIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIETV CREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLR ESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAPIIRKTVEVAEMIKYTCNVWHA AKVTFANEIGNIAKAVGVDGREVMDVICQDHKLNLSRYYMRPGFAFGGSCLPKDVRAL TYRASQLDVEHPMLGSLMRSNSNQVQKAFDLITSHDTRKVGLLGLSFKAGTDDLRESP LVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVASSD VLVLGNGDELFVDLVNKTPSGKKLVDLVGFMPHTTTAQAEGICW" misc_feature 3962825..3964084 /gene="algD" /locus_tag="PA3540" /note="nucleotide sugar dehydrogenase; Region: NDP-sugDHase; TIGR03026" /db_xref="CDD:274399" gene 3964275..3965759 /gene="alg8" /locus_tag="PA3541" /db_xref="GeneID:879005" CDS 3964275..3965759 /gene="alg8" /locus_tag="PA3541" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glycosyltransferase alg8" /protein_id="NP_252231.1" /db_xref="GeneID:879005" /translation="MMETYKRGLAEATGWLVFLSLLMVLALAVPKTVFDADSKDFILL IGAVGIWRYSMGGVHFLRGMLFLHVVYPYYRRRVRQLGSAADPSHVFLMVTSFRIDAL TTAMVYRSVIREAIDSGYPTTVVCSIVEMSDEVLVRSLWEKMNPPDRVSLDFVRIPGT GKRDGLAYGFRAISRHLPDDDAVVAVIDGDTVLDHGVVKKTVPWFKLFPNVGGLTTNE FCEVQGGYVMSEWHKLRFAQRHINMCSMALSKRVLTMTGRMSVFRARVVTNPEFITDV ENDHLEHWRLGRFKFLTGDDKSSWFSLMRLGYDTFYVPDAAINTVEHPPEKSFIKASR KLMYRWYGNNLRQNSRALKLGARRLGWFTMLVLFDQRVSMWTSLLGLVVAILASLKYS IAFLLVYLLWIGLTRLVLTLLLSLSGHRIGPAYPLILYYNQIVGALVKIYVFFRLDRQ SWTRQPTKLERGLASFQRWFNAWSSRAMTFSAASIFVAVLLTIV" misc_feature 3964533..3965303 /gene="alg8" /locus_tag="PA3541" /note="Glycosyltransferase like family 2; Region: Glyco_tranf_2_3; pfam13641" /db_xref="CDD:433372" gene 3965842..3967011 /gene="alg44" /locus_tag="PA3542" /db_xref="GeneID:878770" CDS 3965842..3967011 /gene="alg44" /locus_tag="PA3542" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alginate biosynthesis protein Alg44" /protein_id="NP_252232.1" /db_xref="GeneID:878770" /translation="MNTAVNVNVVHESEAQRQFARVKLPARIRYIGANREGVDARLLD LSAGGFAFTASGAPIQPGDLYKGKLLFQVDSISFSLEVEFQVRSVDPASRRVGCEFQN LKPREVAALRYLITSYLAGEVIGVGDMLNTLQRENFTKARKQGGGNGGMGFFGRVRAV TLSTAIFVVGVGAFAFILNQMYNLYFVTHADSGVVSVPNQQITMPREGTVQSLLGPNA EVAKGAPIATFSANLLDMLKGNLTEEQLNPGNIEKLFGHQMKGTLTSPCDCRVVQQLV ADGQYANKGQVIFTLAPRDSVASIEARFPYRNAAELAPGTRVNFQVAGDGVNRSGRIV NTAPVDGDLSSEIRVQIQPDQPLDAQYAGRPAEVSIGGLPGRTLLNKAVTLATAR" misc_feature 3965887..3966186 /gene="alg44" /locus_tag="PA3542" /note="PilZ domain; Region: PilZ; pfam07238" /db_xref="CDD:399904" misc_feature 3966451..3966714 /gene="alg44" /locus_tag="PA3542" /note="Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl; Region: Biotinyl_lipoyl_domains; cl11404" /db_xref="CDD:448245" misc_feature 3966619..3966621 /gene="alg44" /locus_tag="PA3542" /note="lipoyl-biotinyl attachment site [posttranslational modification]; other site" /db_xref="CDD:133456" misc_feature <3966625..3966951 /gene="alg44" /locus_tag="PA3542" /note="Multidrug resistance efflux pump EmrA [Defense mechanisms]; Region: EmrA; COG1566" /db_xref="CDD:441174" gene 3967025..3968452 /gene="algK" /locus_tag="PA3543" /db_xref="GeneID:878771" CDS 3967025..3968452 /gene="algK" /locus_tag="PA3543" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alginate biosynthesis protein AlgK" /protein_id="NP_252233.1" /db_xref="GeneID:878771" /translation="MKMPILPPLPLASRHLLLASAIALAAGCAGLPDQRLAQEALERG DLATAQSNYQALAAMGYADAQVGLADMQVASGDSAQQAKAEKLYREAAQTSPRARARL GKWLAAKPGASDAEHREAERLLSQAFEQGEDSALVPLIVLYLQYPQSWPEIDPQQRID QWRARGLPQADLAQIILYRTQGTYAQHLGEIEQVCQRWLRRMDVCWYELATVYQMQGN AEKQKVLLEQLRAAYKAGRVPGERVDSVAGVLADGELGQPDPQTAQALLEEIAPSYPA AWVSLAKLLYDYPDQGDLEKMLGYLKNAQDAAQPRAELLLGRLYYDGKWAPQDPRKAE RHLLKAAASEPQANYYLGQIYRRGFLGKVYPQKAVDHLILAARAGQASADMALAQLWS QGRGIQPNRVNAYVFGQLAVQQQVPQASDLLGQIEAQLPPAERSQAQQLLKREQQSRG NNWQATVSLLQSQDSPINEEEPESL" misc_feature 3967103..3968404 /gene="algK" /locus_tag="PA3543" /note="alginate biosynthesis TPR repeat lipoprotein AlgK; Region: AlgK_TPR_lipo; NF038194" /db_xref="CDD:439506" misc_feature 3967901..3967990 /gene="algK" /locus_tag="PA3543" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" misc_feature 3968009..3968095 /gene="algK" /locus_tag="PA3543" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" misc_feature 3968114..3968203 /gene="algK" /locus_tag="PA3543" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" gene 3968449..3969921 /gene="algE" /locus_tag="PA3544" /db_xref="GeneID:879838" CDS 3968449..3969921 /gene="algE" /locus_tag="PA3544" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alginate production protein AlgE" /protein_id="NP_252234.1" /db_xref="GeneID:879838" /translation="MNSSRSVNPRPSFAPRALSLAIALLLGAPAFAANSGEAPKNFGL DVKITGESENDRDLGTAPGGTLNDIGIDLRPWAFGQWGDWSAYFMGQAVAATDTIETD TLQSDTDDGNNSRNDGREPDKSYLAAREFWVDYAGLTAYPGEHLRFGRQRLREDSGQW QDTNIEALNWSFETTLLNAHAGVAQRFSEYRTDLDELAPEDKDRTHVFGDISTQWAPH HRIGVRIHHADDSGHLRRPGEEVDNLDKTYTGQLTWLGIEATGDAYNYRSSMPLNYWA SATWLTGDRDNLTTTTVDDRRIATGKQSGDVNAFGVDLGLRWNIDEQWKAGVGYARGS GGGKDGEEQFQQTGLESNRSNFTGTRSRVHRFGEAFRGELSNLQAATLFGSWQLREDY DASLVYHKFWRVDDDSDIGTSGINAALQPGEKDIGQELDLVVTKYFKQGLLPASMSQY VDEPSALIRFRGGLFKPGDAYGPGTDSTMHRAFVDFIWRF" misc_feature 3968563..3969903 /gene="algE" /locus_tag="PA3544" /note="Alginate export; Region: Alginate_exp; pfam13372" /db_xref="CDD:433155" gene 3969942..3971573 /gene="algG" /locus_tag="PA3545" /db_xref="GeneID:879839" CDS 3969942..3971573 /gene="algG" /locus_tag="PA3545" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alginate-c5-mannuronan-epimerase AlgG" /protein_id="NP_252235.1" /db_xref="GeneID:879839" /translation="MPDISLSIPRRRLPRLRPLAAAVLGAVLLHGQAWAAQPVEKPQP VPAQAGNEPGLTQGLKETGNYTVTTAPAEPLHLDPPKLPDLSGYTAAAVEAKIVRKPG GRASVQRMVQQQPLKEFTGGSNRLAEWVKRQRQMPQAIFIEGGYVNLAQLAGKLPASA LEQVEPGVFVARLPIVVSQGATLDIDKQVKELRLSQERGAFLVNDGMLFVRDSKVTGW SESKKEPAWFKTPNEFRPFLISWGGAEVYLSNSTFTSFGYNASKAYGISISQYSPGMD KQMKRPRPKGWVIDSTIVDSWYGFYCYEADDLVVKGNTYRDNIVYGIDPHDRSHRLII ADNTVHGTRKKHGIIVSREVNDSFIFNNRSYENKLSGIVLDRNSEGNLVAYNEVYRNH SDGITLYESGDNLLWGNQVLANRRHGIRVRNSVNIRLYENLAAGNQLIGVYGHIKDLT NTDRNIALDPFDTKVSLIVVGGKLAGNGSGPLSVDSPLSLELYRVAMLAPTKSSGISL PGVLGEKQDQILDLLVRQDKAVLIDPVESQAELQD" misc_feature 3970008..3971570 /gene="algG" /locus_tag="PA3545" /note="mannuronan 5-epimerase AlgG; Region: epimerase_AlgG; NF038177" /db_xref="CDD:468398" gene 3971586..3973010 /gene="algX" /locus_tag="PA3546" /db_xref="GeneID:878551" CDS 3971586..3973010 /gene="algX" /locus_tag="PA3546" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alginate biosynthesis protein AlgX" /protein_id="NP_252236.1" /db_xref="GeneID:878551" /translation="MKTRTSRLFRLSALAAGLCLAQAALAADPGAAPSYQALPAGNLC PAAAYDSRYNTKYLGFFTHLVQAQDDWLFRTTYDLRTDFGTSAEGWRELRALRDELKR KGIELVVVYQPTRGLVNREKLSPAEKAGFDYELAKKNYLATIARFRQAGIWTPDFSPL FDEKEEHAYYFKGDHHWTPHGARRSAKIVAETLKQVPGFEEIPKKQFESKRVGLLSKL GTFHKAAAQLCGNSYATQYVDRFETEPVGASDSGDLFGDGGNPQIALVGTSNSGPAYN FAGFLEEFSGADILNNAVSGGGFDSSLLAYMTSEEFHKNPPKILIWEFATHYDMAQKS FYRQAMPLVDNGCSGRKTVLSRKVKLRQGRNEVLLNSAALPIRSGSYVADVTYSDPSV HELKNTIWYMNGRREQLKIEQSKAVDTGGRYVFQLRNDSDWADQQFLSLEIEAPEDMP QGLEVQASICQAAPAKASQSVAGR" misc_feature 3971712..3972629 /gene="algX" /locus_tag="PA3546" /note="N-terminal catalytic domain of the putative alginate O-acetyltranferase AlgX; Region: AlgX_N; cd14441" /db_xref="CDD:270207" misc_feature 3972621..3972989 /gene="algX" /locus_tag="PA3546" /note="C-terminal carbohydrate-binding module; Region: CBM_26; pfam16824" /db_xref="CDD:435600" gene 3973014..3974117 /gene="algL" /locus_tag="PA3547" /db_xref="GeneID:878552" CDS 3973014..3974117 /gene="algL" /locus_tag="PA3547" /EC_number="4.2.2.3" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alginate lyase" /protein_id="NP_252237.1" /db_xref="GeneID:878552" /translation="MKTSHLIRIALPGALAAALLASQVSQAADLVPPPGYYAAVGERK GSAGSCPAVPPPYTGSLVFTSKYEGSDSARATLNVKAEKTFRSQIKDITDMERGATKL VTQYMRSGRDGDLACALNWMSAWARAGALQSDDFNHTGKSMRKWALGSLSGAYMRLKF SSSRPLAAHAEQSREIEDWFARLGTQVVRDWSGLPLKKINNHSYWAAWSVMSTAVVTN RRDLFDWAVSEFKVAANQVDEQGFLPNELKRRQRALAYHNYALPPLAMIAAFAQVNGV DLRQENHGALQRLAERVMKGVDDEETFEEKTGEDQDMTDLKVDNKYAWLEPYCALYRC EPKMLEAKKDREPFNSFRLGGEVTRVFSREGGS" misc_feature 3973083..3974096 /gene="algL" /locus_tag="PA3547" /note="Alginate Lyase A1-III; enzymatically depolymerizes alginate, a complex copolymer of beta-D-mannuronate and alpha-L-guluronate, by cleaving the beta-(1,4) glycosidic bond; Region: AlgLyase; cd00244" /db_xref="CDD:238148" misc_feature order(3973245..3973247,3973269..3973271,3973428..3973430, 3973440..3973442,3973449..3973451,3973614..3973619, 3973776..3973781,3973788..3973790,3973953..3973955, 3973974..3973976,3974067..3974069) /gene="algL" /locus_tag="PA3547" /note="active site" /db_xref="CDD:238148" gene 3974359..3975921 /gene="algI" /locus_tag="PA3548" /db_xref="GeneID:877959" CDS 3974359..3975921 /gene="algI" /locus_tag="PA3548" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alginate o-acetylase AlgI" /protein_id="NP_252238.1" /db_xref="GeneID:877959" /translation="MVFSSNVFLFLFLPVFLGLYYLSGERYRNLLLLIASYVFYAWWR VDFLLLFAGVTVFNYWIGLRIGAAGVRTRAAQRWLILGVVVDLCVLGYFKYANFGVDS LNEIITSFGMQPFVLTHILLPIGISFYTFESISYIIDVYRGDTPATHNLIDFAAFVAI FPHLIAGPVLRFKDLVDQFNHRTHTVDKFAEGCTRFMQGFVKKVFIADTLAALADHCF ALQNPTTGDAWLGALAYTAQLYFDFSGYSDMAIGLGLMMGFRFMENFNQPYISQSITE FWRRWHISLSTWLRDYLYISLGGNRGSTFQTYRNLFLTMLLGGLWHGANFTYIIWGAW HGMWLAIERALGVNAAPRVLNPLKWVITFLLVVIGWVIFRAENLQVAWRMYEAMFSFG TWQLSELNRANLTGLQVGTLVLAYLVLAFFGLRQFYNQPLQTKAPKAAANSDEVAADG PASAQPRAPREAAGDPAAIAYSPSGALVYQPSWLSQLPVLATRLALLLLFAASVLKLS AQSYSPFLYFQF" misc_feature 3974413..3975636 /gene="algI" /locus_tag="PA3548" /note="D-alanyl-lipoteichoic acid acyltransferase DltB, MBOAT superfamily [Cell wall/membrane/envelope biogenesis]; Region: DltB; COG1696" /db_xref="CDD:441302" gene 3975936..3977111 /gene="algJ" /locus_tag="PA3549" /db_xref="GeneID:878716" CDS 3975936..3977111 /gene="algJ" /locus_tag="PA3549" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alginate o-acetylase AlgJ" /protein_id="NP_252239.1" /db_xref="GeneID:878716" /translation="MTQSISRPLQYAYIAAFGGLLLGLAGWSLKSVPGFSAAADTPLL NGKLAHAFEAHYDKEFPIKRLGTNLWAALDYTLFHEGRPGVVIGKDGWLFTDEEFKPA PSGQQLEDNWALVRGVQRELNRRGVKLVLAVIPAKARLYPEHIGREQPAALHDSLYQD FLARARAAGIDSPDLLGSLRQAKDNGAVFLRTDTHWSPLGAETVAQRLGAEIRETHLL DVPAQNFVTRVGEERTHKGDLLSFLPLDPLFDELLPRPEQLQQRTTEAAPALPGGQQS GAGDDLFGDSQQPRLALVGTSYSANPRWNFEGALKQALSADLINYAKEGKGPLEPMLE LLQDEGFRKDPPQLLVWEFPERYLPMASDLSQFDADWVAQLKASGGRDERLAASRND" misc_feature 3976074..3977057 /gene="algJ" /locus_tag="PA3549" /note="putative alginate O-acetyltranferases AlgJ, AlgV, and similar proteins; Region: AlgJ_like; cd14442" /db_xref="CDD:270208" gene 3977184..3977834 /gene="algF" /locus_tag="PA3550" /db_xref="GeneID:878717" CDS 3977184..3977834 /gene="algF" /locus_tag="PA3550" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alginate o-acetyltransferase AlgF" /protein_id="NP_252240.1" /db_xref="GeneID:878717" /translation="MNPMTRRHTWTRLACALSLGVAAFAAQADEGALYGPQAPKGSAF VRAYNAGNSELDVSVGSTSLNDVAPLGSSDFKFLPPGSYTAQVGQQSLPVKLDPDSYY TLVSQPGGKPQLVAEPPFKNKQKALVRVQNLSGSKLTLKTADGKTDVVKDVGPQSHGD REINPVKVNLALFDGSKKVSDLKPVTLARGEVVCLYVTGSGGKLAPVWVKRPVKAD" misc_feature 3977271..3977765 /gene="algF" /locus_tag="PA3550" /note="Alginate O-acetyl transferase AlgF; Region: AlgF; pfam11182" /db_xref="CDD:402657" gene 3978031..3979476 /gene="algA" /locus_tag="PA3551" /db_xref="GeneID:879142" CDS 3978031..3979476 /gene="algA" /locus_tag="PA3551" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="bifunctional mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase" /protein_id="NP_252241.1" /db_xref="GeneID:879142" /translation="MIPVILSGGSGSRLWPLSRKQYPKQFLALTGDDTLFQQTIKRLA FDGMQAPLLVCNKEHRFIVQEQLEAQNLASQAILLEPFGRNTAPAVAIAAMKLVAEGR DELLLILPADHVIEDQRAFQQALALATNAAEKGEMVLFGIPASRPETGYGYIRASADA QLPEGVSRVQSFVEKPDEARAREFVAAGGYYWNSGMFLFRASRYLEELKKHDADIYDT CLLALERSQHDGDLVNIDAATFECCPDNSIDYAVMEKTSRACVVPLSAGWNDVGSWSS IWDVHAKDANGNVTKGDVLVHDSHNCLVHGNGKLVSVIGLEDIVVVETKDAMMIAHKD RVQDVKHVVKDLDAQGRSETQNHCEVYRPWGSYDSVDMGGRFQVKHITVKPGARLSLQ MHHHRAEHWIVVSGTAQVTCDDKTFLLTENQSTYIPIASVHRLANPGKIPLEIIEVQS GSYLGEDDIERLEDVYGRTAEPALQVVAGSR" misc_feature 3978031..3979434 /gene="algA" /locus_tag="PA3551" /note="mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Region: GMP_PMI; TIGR01479" /db_xref="CDD:273648" misc_feature order(3978046..3978048,3978052..3978054,3978364..3978366) /gene="algA" /locus_tag="PA3551" /note="Substrate binding site [active]" /db_xref="CDD:133003" gene 3979860..3981008 /gene="arnB" /locus_tag="PA3552" /db_xref="GeneID:879143" CDS 3979860..3981008 /gene="arnB" /locus_tag="PA3552" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase" /protein_id="NP_252242.1" /db_xref="GeneID:879143" /translation="MSLDFLPFSRPSIGEDEIAAVEQVLRSGWITTGPKNQELEQRFA ERLGCRHAVALSSATGALHVTLLALGIGPGDEVITPSLTWVSTANVITLLGATPVFVD VDRDTLMCSAQAVEAAIGPRTRAIVPVHYAGSTLDLEGLRTVAGRHGIALVEDAAHAV GSEYRGRPVGSRGTAIFSFHAIKNLTCAEGAMFVSDDSALAERVRRLKFHGLGVDAYD RLSHGRKPQAEVIEPGFKYNLADLNAALALVQLKRLDALNARRQALAERYLERLAGLP LAPLGLPAHKQRHAWHLFILRIDAEVCGLGRDAFMEALKARGIGSGIHFIASHLHHYY RQRQPRLSLPNSEWNSARLCSIPLFPDMRDDDIERVARAIEEILEKRR" misc_feature 3979869..3980999 /gene="arnB" /locus_tag="PA3552" /note="UDP-4-amino-4-deoxy-L-arabinose aminotransferase; Region: PRK11658" /db_xref="CDD:183263" misc_feature order(3980031..3980036,3980322..3980324,3980331..3980333, 3980391..3980393,3980403..3980408,3980829..3980831) /gene="arnB" /locus_tag="PA3552" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99740" misc_feature order(3980031..3980036,3980106..3980108,3980322..3980324, 3980331..3980333,3980391..3980393,3980406..3980408) /gene="arnB" /locus_tag="PA3552" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99740" misc_feature 3980406..3980408 /gene="arnB" /locus_tag="PA3552" /note="catalytic residue [active]" /db_xref="CDD:99740" gene 3981005..3982024 /gene="arnC" /locus_tag="PA3553" /db_xref="GeneID:878472" CDS 3981005..3982024 /gene="arnC" /locus_tag="PA3553" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase" /protein_id="NP_252243.1" /db_xref="GeneID:878472" /translation="MKPYPIDLVSVVIPVYNEEASLPELLRRTEAACLELGRAFEIVL VDDGSRDRSAELLQAAAERDGSAVVAVILNRNYGQHAAILAGFEQSRGDLVITLDADL QNPPEEIPRLVERAAQGYDVVGSIRAERQDSAWRRWPSRLVNLAVQRSTGVAMHDYGC MLRAYRRSIVEAMLACRERSTFIPILANGFARHTCEIRVAHAERAHGESKYSAMRLLN LMFDLVTCMTTTPLRLLSLVGGGMALAGFLFALFLLVLRLAFGAAWAGNGLFVLFAVL FMFSGVQLLGMGLLGEYLGRMYSDVRARPRFFIERVVRATPSALPSALQRAGFTSSSS EPSTP" misc_feature 3981017..3981961 /gene="arnC" /locus_tag="PA3553" /note="undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional; Region: PRK10714" /db_xref="CDD:182669" gene 3982021..3984009 /gene="arnA" /locus_tag="PA3554" /db_xref="GeneID:878473" CDS 3982021..3984009 /gene="arnA" /locus_tag="PA3554" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase" /protein_id="NP_252244.1" /db_xref="GeneID:878473" /translation="MTSKAVVFAYHDIGCTGIEALLNAGYEIAAVFTHADDPRENTFY ASVARLCAERGIPLHAPEDVNHPLWLERIRQLRPDFLFSFYYRRLLGAELLACAARGA YNLHGSLLPRYRGRAPANWVLVNGETQTGVTLHRMIERADAGPILAQQAVAIDPEDTA LSLHGKLRKAAGALLRDSLPLLALGVLPEVEQDESQASHFGRRTPADGLLDWHRPARQ LYDLVRAVTQPYPGAFCQVGEQKLIVWSAEVVAGNHGREPGSVLSCDPLRIACGEDSL VLRFGQRGERGLYLAGTQLATELGLVEGARLRGAACSPQRRTRVLILGVNGFIGNHLS ERLLRDGRYEVHGMDIGSDAIERLKADPHFHFVEGDIGIHSEWLEYHVKKCDVILPLV AIATPIEYTRNPLRVFELDFEENLRIVRYCVKYGKRVVFPSTSEVYGMCQDPDFDEDR SNLVVGPINKQRWIYSVSKQLLDRVIWAYGQQGLRFTLFRPFNWMGPRLDRLDSARIG SSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNI GNPDNEASIRQLGEELLRQFEAHPLRAQFPPFAGFREVESRSFYGDGYQDVAHRKPSI DNARRLLDWQPTIELRETIGKTLDFFLHEALREREAQA" misc_feature 3982030..3983982 /gene="arnA" /locus_tag="PA3554" /note="bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA; Region: PRK08125" /db_xref="CDD:236156" gene 3984006..3984893 /gene="arnD" /locus_tag="PA3555" /db_xref="GeneID:879121" CDS 3984006..3984893 /gene="arnD" /locus_tag="PA3555" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD" /protein_id="NP_252245.1" /db_xref="GeneID:879121" /translation="MIQAGLRIDVDTFRGTRDGVPRLLELLDEAGLKATFFFSVGPDN MGRHLWRLARPAFFWKMLRSRAASLYGWDILLAGTAWPGKPIGRELGPLMRRTQAAGH EVGLHAWDHHAWQTHAGVWSVQQLGEQIRRGSDCLADILGQPVRCSAAAGWRADGRVV EAKQPFGFRYNSDCRGRGAFRPRLADGSPGIPQVPVNLPTFDEVVGPGLPREAYNDFI LERFAAGRDNVYTIHAEVEGLLLAPAFRELLRRAERRGIRFRPLGELLPDDPRSLPLA ELVRGRLAGREGWLGVRQP" misc_feature 3984006..3984887 /gene="arnD" /locus_tag="PA3555" /note="4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; Provisional; Region: PRK15394" /db_xref="CDD:185292" gene 3984890..3986539 /gene="arnT" /locus_tag="PA3556" /db_xref="GeneID:879122" CDS 3984890..3986539 /gene="arnT" /locus_tag="PA3556" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="4-amino-4-deoxy-L-arabinose lipid A transferase" /protein_id="NP_252246.1" /db_xref="GeneID:879122" /translation="MSRRQTCSLLLIAFGLFYLVPLSNHGLWIPDETRYAQISQAMLL GGDWVSPHFLGLRYFEKPVAGYWMIALGQAVFGENLFGVRIASVVATALSVLLAYLLA RRLWRDPRTSLACALLYASFGLIAGQSGYANLDPQFTFWVNLSLVALWHALDAGSRRA RLLGWTLLGLACGMGFLTKGFLAWLLPVLVALPYMLWQRRWRELLGYGALAVLAALLV CLPWALAVHAREADYWRFFFWHEHIRRFAGEDAQHSRPWWFYLPLLAVACLPWSGLLP SALRQAWHERRQAPVVFLALWLLLPLAFFSLSRGKLPTYIMPCLLPLALLMGHALVQR LRLGNSVALRGNGLLNLGLALLALAALAYLQLRKPVYQEEPFELFLVLLVIGAWAAAG LAQWRYPLRAWAAPLLASWVLIALLPAAMPNHVVQNKTPDLFVAEHLDELTGARHLLS NDLGAASALAWRLRRSDVTLYDTRGELKYGLSYPEHSQRSVPLADIRQWLWRARQDGS IAVLLRINSASDRYQLALLPGDGERYRNGNLVLAILPQVRP" misc_feature 3984890..3986527 /gene="arnT" /locus_tag="PA3556" /note="lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Region: arnT; PRK13279" /db_xref="CDD:237330" gene 3986536..3986883 /gene="arnE" /locus_tag="PA3557" /db_xref="GeneID:879132" CDS 3986536..3986883 /gene="arnE" /locus_tag="PA3557" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE" /protein_id="NP_252247.1" /db_xref="GeneID:879132" /translation="MSAALLLATLLMTGLGQVAQKLTVEHWRLVAADGWTARLRSPWP WLALLALGLGLLCWLLLLQRVEVGSAYPMLALNFVLVTLAARFVFDEPVDRRHLAGLL LIVAGVALLGRSA" misc_feature <3986722..3986880 /gene="arnE" /locus_tag="PA3557" /note="EamA-like transporter family; Region: EamA; cl23754" /db_xref="CDD:474045" gene 3986880..3987293 /gene="arnF" /locus_tag="PA3558" /db_xref="GeneID:879133" CDS 3986880..3987293 /gene="arnF" /locus_tag="PA3558" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF" /protein_id="NP_252248.1" /db_xref="GeneID:879133" /translation="MNALRGWLAALGSVLLASAAQLGMRWGMSRLPLPEAWAGQTPER AALLAVALAVAAYAASLLCWLAALRHLPLGRAYSLLSASYALVYLLAASLPAFDETFS TSKTLGVGLVVLGVLTVNARRTAAAPAHHPSRKAP" misc_feature 3986889..3987263 /gene="arnF" /locus_tag="PA3558" /note="EamA-like transporter family; Region: EamA; cl23754" /db_xref="CDD:474045" gene 3987290..3988684 /locus_tag="PA3559" /db_xref="GeneID:879827" CDS 3987290..3988684 /locus_tag="PA3559" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="nucleotide sugar dehydrogenase" /protein_id="NP_252249.1" /db_xref="GeneID:879827" /translation="MKISVFGSGYVGLVQAAVLAEVGHDVLCMDIDRNKVERLAQGLA SIYEPGLDALLREGLDSGRLRFSSDARLAVEHGRVQFIAVGTPPGEDGAADLGAVFVV ADAIAEHRRKPVIVVEKSTVPVGTGDRLRAHIERRLEADGRELEFEIVSNPEFLKEGS AVADCRRPDRIVVGCDNEEVRQVMRELYEPFNRNHDRMLFMGLRSAELTKYAANGMLA TKISFINQIAELAEHLGADIEAVRQGIGADPRIGYHFIYPGCGYGGSCFPKDMRALIH SAEQAHCSSDLLQAVEAINRRQKHKLFERIRVFYDGDLRGKTFALWGLAFKPNTDDMR DAPSRELMEALWRHGAQVRAYDPEAMQETQRLYGHDERLSLMGTPEATLGGADALVIC TEWQQFKAPDFELLKERLKAPVIFDGRNLYDPERMARHGFHYYPMGRGQSCSLPINEA SLAQEDGMRLLRQA" misc_feature 3987290..3988609 /locus_tag="PA3559" /note="UDP-glucose 6-dehydrogenase [Cell wall/membrane/envelope biogenesis]; Region: Ugd; COG1004" /db_xref="CDD:440628" gene complement(3988838..3990595) /gene="fruA" /locus_tag="PA3560" /db_xref="GeneID:879828" /db_xref="PseudoCap:PA3560" CDS complement(3988838..3990595) /gene="fruA" /locus_tag="PA3560" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="PTS system fructose-specific transporter subunit IIBC" /protein_id="NP_252250.1" /db_xref="GeneID:879828" /db_xref="PseudoCap:PA3560" /translation="MKLAIVTACPGGQVTSVLAARLLRGAAERLGWETCVEANAGSRP EGELSAEQIAEADWVLLVGVEPLAAARFVGKPVYRARPAEALADPRAFLQRAAALASV EVAGDEAGLVAPEAGAAPRIVAVTACPTGVAHTFMAAEALQLAAGQLGFALQVETQGS VGARNPLDPADIAAADVVLLAADIDVDTARFAGKKIYRCGTGVALKQARATLERALAE GQVESAGAASAVVARDEKRGVYKHLLTGVSFMLPMVVAGGLLIALSLAFGIDAYKQPG SLAAVLRTVGDTAFVLMVPMLAGYIAYSIADRPGLAPGMLGGLLAGTLGAGFIGGIVA GFIAGYAARAISHGLRLPASLEALKPILVIPLLASLVTGLLMLYVVGKPVAGMLAALT GFLDGMGTSNAILLGLLLGGMMCVDLGGPVNKAAYAFSVGLLSSHSYAPMAAVMAAGM VPPIGMGLATLLARRKFAESERQAGKAASVLGLCFISEGAIPFAAKDPLRVIPASIAG GALTGALSMYFGCKLQAPHGGLFVMLVPNAINHALAYLLAIVAGSLLTGLLYAVLKRG AEPGLALGTSSSREPAAGG" misc_feature complement(3988880..3990595) /gene="fruA" /locus_tag="PA3560" /note="PTS system fructose-specific transporter subunits IIBC; Provisional; Region: PRK10712" /db_xref="CDD:236740" gene complement(3990597..3991541) /gene="fruK" /locus_tag="PA3561" /db_xref="GeneID:880224" CDS complement(3990597..3991541) /gene="fruK" /locus_tag="PA3561" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="1-phosphofructokinase" /protein_id="NP_252251.1" /db_xref="GeneID:880224" /translation="MARILTITLNPALDLTVRLRQLELGAVNRSEAVLTQAAGKGLNV AQVLADLGHRLTVSGFLGEDNQPPFTAMFQRRGFADAFVRVPGETRSNIKLAERGGRV SDLNGPGPEADERAQAALLERLDRLAGEHELAVVAGSLPRGVEPEWLGELLRRLRRLG LKVAFDSSGAALREGVKAAPWMIKPNVEELADLCSAPMDDLVAQRQAAERLRHDGVGQ VVISQGAAGVNWFAAEGAWQARPPAVEVASTVGAGDSLLAGMLHGLASGWPAERVLRQ ATAIASLAVTQFEFGIGDPQRLARIEAGVVVQPLVEEA" misc_feature complement(3990621..3991532) /gene="fruK" /locus_tag="PA3561" /note="1-phosphofructokinase; Region: pfkB; TIGR03828" /db_xref="CDD:274804" misc_feature complement(order(3991131..3991133,3991371..3991373, 3991377..3991379,3991395..3991397,3991407..3991409)) /gene="fruK" /locus_tag="PA3561" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:238570" misc_feature complement(order(3990780..3990782,3990786..3990788, 3990858..3990860,3990876..3990878,3990984..3990986, 3990990..3990992,3991044..3991046)) /gene="fruK" /locus_tag="PA3561" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:238570" gene complement(3991541..3994411) /gene="fruI" /locus_tag="PA3562" /db_xref="GeneID:880225" /db_xref="PseudoCap:PA3562" CDS complement(3991541..3994411) /gene="fruI" /locus_tag="PA3562" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="PTS system fructose-specific transporter subunit FruI" /protein_id="NP_252252.1" /db_xref="GeneID:880225" /db_xref="PseudoCap:PA3562" /translation="MLELDTRQIRMGQRAADKAEALRLLGAALVADGLAAPGYAEGLK AREAQGSTYLGQGIAIPHGTPDTRELVFSTGVRLLQFPEGVDWGDGQQVYLAIGIAAK SDEHLQLLQLLTRALGEADLGPALSAAASAEEVLGLLQGAPQELALDAQLVGLGQNAE DLDELAWLGARLLKKAGCVENGFAAVLQQTEPLPLGDGLCWLHSEQLVKRPGLAFVTP AQPLQHQGQLVTGLFCLASLGEAHQALLERLCDLLLEGRGAELVRATSSRSVLAALGG ELPPDWPSARAVLANPHGLHARPAQALAQLAKGFAGEIRVRLADSEAAPVSAKSLSKL LALGARRGQTLEFSAEPAIAEDALPALLAAVREGLGEEVEALAEEALPDAVGEAEEDA RPAPLRAGERLQAIAASPGIASGPAHVQVAQRFEFQPRGESPAHERERLLRAKRAVDE EIVGLVERSTVKAIREIFVTHREMLDDPELAEQVQLRLNRGESAEAAWSRVVEDSAAQ QEALHDALLAERAADLRDLGRRVLARLCGVEAPREPEQPYILVMDEVGPSDVARLDAQ RVAGILTARGGATSHSAIIARALGIPALVGAGAAVLGLEPGTALLLDGEHGWLQVAPS TEQLQQAAAERDARQQRQARADAQRLEPARTRDGHAVEVCANLGDTAGAARAVELGAE GVGLLRTEFVFMNNARAPDLATQEAEYRRVLDALDGRPLVARTLDVGGDKPLPYWPIP HEENPYLGLRGIRLTLQRPQILETQLRALFRAAGERPLRVMFPMVGSLDEWRQARDLA LRLREEIPLADLQLGIMVEVPSAALLAPVLAREVDFFSVGTNDLTQYTLAIDRGHPSL SAQADGLHPAVLQLIDMTVRAAHAEGKWVGVCGELAADPLALPLLVGLGVDELSVSAR SIALVKAGVRELQLVAARGLARKALGLASAAEVRALVEAEVQ" misc_feature complement(3993302..3994411) /gene="fruI" /locus_tag="PA3562" /note="fused PTS fructose transporter subunit IIA/HPr protein; Region: PRK11109" /db_xref="CDD:236849" misc_feature complement(3991544..3993205) /gene="fruI" /locus_tag="PA3562" /note="Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]; Region: PtsA; COG1080" /db_xref="CDD:440698" gene 3994739..3995728 /gene="fruR" /locus_tag="PA3563" /db_xref="GeneID:878245" CDS 3994739..3995728 /gene="fruR" /locus_tag="PA3563" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="FruR family transcriptional regulator" /protein_id="NP_252253.1" /db_xref="GeneID:878245" /translation="MKLSDIARLAGVSVTTASYVINGKAAQRRISAATVERVLAVVEE HGYQPDQQAAGLRRGQTRTLGFILPDLENPSYARLAKQLEQGARARGYQLLIACSDDE PETERQVVNLFRARRCDALIVASCLPAGDDTHARLVAEGLPVVAIDRQLDPQRFASVI SDDQDAARRLTETLLQPAPRHIALLGARADLIISHDRAAGFRQALKDFRGEVIVEHAE VFSRECGRRLMEQLLERLGYLPDALVTTAYVLLEGVFDVFQARADGWPEGLRVATFGD TQLLDFVPLKVNSIYQQHALIAANALELALRAVEENDYRPGLHAVPRQLKLRD" misc_feature 3994739..3995722 /gene="fruR" /locus_tag="PA3563" /note="catabolite repressor/activator; Region: PRK11303" /db_xref="CDD:236897" gene 3995841..3996518 /locus_tag="PA3564" /db_xref="GeneID:878246" CDS 3995841..3996518 /locus_tag="PA3564" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252254.1" /db_xref="GeneID:878246" /translation="MVLGVYRENWQRVWDLAQAEDGLYAALGLHPVYLARHRPQHLDD LRQWLQRLRGETKLCAVGEIGLDYYLEHLDRDAQQALFEAQLRLAAEFRLPALIHVRR AHAATIATLKRIRLERRGIIHAFAGSREEAREYLKLGFRLGLGGAPTWPQANRLRKVA AELPAEAIVLETDAPDMAPSMHPGQRNSPEHLPDICRALAELRGVDAEELAASSSRNA AELFGWD" misc_feature 3995850..3996512 /locus_tag="PA3564" /note="3'->5' ssDNA/RNA exonuclease TatD [Cell motility]; Region: TatD; COG0084" /db_xref="CDD:439854" gene complement(3996806..3997726) /locus_tag="PA3565" /db_xref="GeneID:878684" CDS complement(3996806..3997726) /locus_tag="PA3565" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252255.1" /db_xref="GeneID:878684" /translation="MLRYDDLQVFVHTSDSGSLSAAARQLEISPAVASAALKRLESEL EVRLFARSTRSLRLTPEGDAFLLHARASLRSLEEGRRLLQGGKDQIAGVLQLSAPSDF GRNLLLPWLDEFQARYPQLSLRLLLGDRVTDLYRQPVDVAIRYGAPADSSLVALPLAP DNRRVLCAAPGYLAERGEPRQPDDLREHNCLLYQLGGRVHDRWAFQRGRRSLTLTVAG DRVCDDADVVRRWALAGKGLVYKSWLDVAEDVRAGRLRLLLPEWQGEATPMNLLCTHR AQLTRPVTLLRAFVRERCDALLAEAPWTRN" misc_feature complement(3997541..3997714) /locus_tag="PA3565" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(3996857..3997453) /locus_tag="PA3565" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature complement(order(3996920..3996922,3997001..3997003, 3997052..3997054,3997241..3997243,3997250..3997252, 3997292..3997294,3997409..3997411,3997421..3997423)) /locus_tag="PA3565" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature complement(order(3997025..3997027,3997034..3997039, 3997058..3997072,3997160..3997162,3997346..3997366, 3997370..3997372,3997382..3997384,3997391..3997396, 3997400..3997405,3997415..3997420)) /locus_tag="PA3565" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 3997822..3998115 /locus_tag="PA3566" /db_xref="GeneID:878685" CDS 3997822..3998115 /locus_tag="PA3566" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252256.1" /db_xref="GeneID:878685" /translation="MSTPLTLIATITAAPGHAEALERELRALVAPSRAEAGCLQYDLH QDRHDSHLFYMIEQWRDDAALERHQNTEHFLRFSRGNEALLQNVKIDQLYRLA" misc_feature 3997834..3998076 /locus_tag="PA3566" /note="Quinol monooxygenase YgiN [Energy production and conversion]; Region: YgiN; COG1359" /db_xref="CDD:440970" gene 3998137..3999150 /locus_tag="PA3567" /db_xref="GeneID:878695" CDS 3998137..3999150 /locus_tag="PA3567" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_252257.1" /db_xref="GeneID:878695" /translation="MKAVGYYQSLPIDHPDALLDLELPEPTPGPRDLLVEVRAISVNP VDTKVRQRAQPEAGQAKVLGWDAAGVVRAVGSEVSLFRPGDRVWYAGDITRPGSNSEL HRVDERIAGHLPKSLDFAQAAALPLTTITAWELLFERLQIAEGKADQGQSLLVVGAAG GVGSILVQLARQLTGLNVIGTASRAETQAWVRDLGAHHVIDHGKPLAEELKRIGVAEV SHVASLTHTDQHLEQIVAALRPQGRLALIDDPASLDIGKLKQKSLSLHWEFMYTRSMF QTDDMIEQHRLLERVAGLIDEGVLKTTVGEHFGRIDAANLRRAHALLESGRAKGKIVL EGF" misc_feature 3998140..3999147 /locus_tag="PA3567" /note="zinc-binding alcohol dehydrogenase family protein; Region: adh_fam_1; TIGR02817" /db_xref="CDD:274313" gene complement(3999208..4001094) /locus_tag="PA3568" /db_xref="GeneID:878696" CDS complement(3999208..4001094) /locus_tag="PA3568" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="propionyl-CoA synthetase" /protein_id="NP_252258.1" /db_xref="GeneID:878696" /translation="MTYLQQHARSIAEPAAFWAEQARSLAWYQAPANILESLPDGTHR WFADGRLNSAYLALDRQIEEGRGEQTALIYDSPVTGTQDRYSYLRLRDEVARLAGALR ALGVGKGDRVIIYMPMVPQAAMAMLACARLGAVHSVVFGGFAPYELALRIDDATPKLV LTASCGLEFDRVIEYKPLVDKALELAIHQPAHVMVWQRPQAPARLHPGRDLDWQDCLA AAEPADPLPVASGDPLYIMYTSGTTGKPKGIVRDNGGHAVAVRYAVRTIYGMQAGDVW WGISDVGWVVGHSLIVYGPLMCGCTTVFYEGKPVRTPDAGAYWRVIEEHRVNSLFCAP TAIRAIRKEDPHGERVKRYDLGSLRHLFLAGEKLDSSTQHWLEEHTGRPVHDHWWQTE TGWPVTAPCIGIAGHDLRAGSTNRAVPGYHVQVLDDEGRPLGANRQGAIVIALPLPPG CAQTLWGDHPRYLQAYLGNYPGYYHTGDGGYLDEDGFVYIMGRTDDVINVSGHRLSTG EMEERVAQHQAVAECAVIGVRDELKGHVPLGLVVLKDDAGIAAEQLQRELVALVREQI GALACFQRVVVVKRLPKTRSGKILRAVLRKIADGEDYAAPSTIDDPTILGEIEAALRV RKAG" misc_feature complement(3999241..4001088) /locus_tag="PA3568" /note="Propionyl-CoA synthetase (PrpE); Region: PrpE; cd05967" /db_xref="CDD:341271" misc_feature complement(order(4000354..4000359,4000363..4000380, 4000387..4000389)) /locus_tag="PA3568" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341271" misc_feature complement(order(3999331..3999333,3999583..3999585, 3999616..3999618,3999625..3999627,3999661..3999663, 3999922..3999939,4000000..4000005,4000378..4000380)) /locus_tag="PA3568" /note="putative AMP binding site [chemical binding]; other site" /db_xref="CDD:341271" misc_feature complement(order(3999388..3999390,3999583..3999594, 3999616..3999618,3999625..3999627,3999661..3999663, 3999922..3999939,4000000..4000005,4000078..4000080, 4000087..4000092,4000096..4000098,4000252..4000257, 4000378..4000380)) /locus_tag="PA3568" /note="putative active site [active]" /db_xref="CDD:341271" misc_feature complement(order(3999388..3999390,3999406..3999408, 3999586..3999594,4000003..4000005,4000078..4000080, 4000087..4000092,4000255..4000257)) /locus_tag="PA3568" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:341271" gene complement(4001196..4002092) /gene="mmsB" /locus_tag="PA3569" /db_xref="GeneID:879097" CDS complement(4001196..4002092) /gene="mmsB" /locus_tag="PA3569" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="3-hydroxyisobutyrate dehydrogenase" /protein_id="NP_252259.1" /db_xref="GeneID:879097" /translation="MTDIAFLGLGNMGGPMAANLLKAGHRVNVFDLQPKAVLGLVEQG AQGADSALQCCEGAEVVISMLPAGQHVESLYLGDDGLLARVAGKPLLIDCSTIAPETA RKVAEAAAAKGLTLLDAPVSGGVGGARAGTLSFIVGGPAEGFARARPVLENMGRNIFH AGDHGAGQVAKICNNMLLGILMAGTAEALALGVKNGLDPAVLSEVMKQSSGGNWALNL YNPWPGVMPQAPASNGYAGGFQVRLMNKDLGLALANAQAVQASTPLGALARNLFSLHA QADAEHEGLDFSSIQKLYRGKD" misc_feature complement(4001208..4002077) /gene="mmsB" /locus_tag="PA3569" /note="3-hydroxyisobutyrate dehydrogenase; Region: HIBADH; TIGR01692" /db_xref="CDD:130753" gene complement(4002108..4003601) /gene="mmsA" /locus_tag="PA3570" /db_xref="GeneID:878814" CDS complement(4002108..4003601) /gene="mmsA" /locus_tag="PA3570" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="methylmalonate-semialdehyde dehydrogenase" /protein_id="NP_252260.1" /db_xref="GeneID:878814" /translation="MSVPVRHLIAGAFVEGLGAQRIPVSNPLDNSTLAEIACASAEQV EQAVASARETFASWKETPVSERARVMLRYQALLKEHHDELAKIVSSELGKTFEDAKGD VWRGIEVVEHACNVPSLLMGETVENVARNIDTYSITQPLGVCVGITPFNFPAMIPLWM FPLAIACGNAFILKPSEQVPLTSVRLAELFLEAGAPKGVLQVVHGGKEQVDQLLKHPQ VKAVSFVGSVAVGQYVYHTGTAHNKRVQSFAGAKNHMVIMPDADKAQVISNLVGASVG AAGQRCMAISVAVLVGAAREWIPEIRDALAKVRPGPWDDSGASYGPVINPQAKARIER LIGQGVEEGAQLLLDGRGYKVEGYPDGNWVGPTLFAGVRPDMAIYREEVFGPVLCLAE VDSLEQAIRLINESPYGNGTSIFTSSGAAARTFQHHIEVGQVGINIPIPVPLPFFSFT GWKGSFYGDLHAYGKQGVRFYTETKTVTARWFDSDSVAGTNFSIQMR" misc_feature complement(4002159..4003589) /gene="mmsA" /locus_tag="PA3570" /note="methylmalonic acid semialdehyde dehydrogenase; Region: MMSDH; TIGR01722" /db_xref="CDD:130783" misc_feature complement(order(4002159..4002164,4002168..4002185, 4002204..4002206,4002246..4002248,4002252..4002254, 4002264..4002266,4002291..4002302,4002306..4002308, 4002312..4002317,4002324..4002326,4002333..4002338, 4002342..4002347,4002351..4002353,4002870..4002872, 4002876..4002878,4002885..4002887,4002894..4002896, 4002906..4002908,4003185..4003187,4003194..4003196, 4003203..4003205,4003218..4003241,4003266..4003271, 4003278..4003280,4003377..4003379,4003389..4003391, 4003398..4003400,4003410..4003412,4003416..4003418)) /gene="mmsA" /locus_tag="PA3570" /note="tetrameric interface [polypeptide binding]; other site" /db_xref="CDD:143404" misc_feature complement(order(4002372..4002374,4002450..4002452, 4002456..4002458,4002756..4002758,4002852..4002860, 4002912..4002914,4002921..4002932,4002981..4002983, 4003071..4003073,4003080..4003082,4003125..4003127, 4003149..4003160)) /gene="mmsA" /locus_tag="PA3570" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:143404" misc_feature complement(order(4002756..4002758,4002765..4002767, 4002858..4002860,4003149..4003151)) /gene="mmsA" /locus_tag="PA3570" /note="catalytic residues [active]" /db_xref="CDD:143404" gene 4003733..4004656 /gene="mmsR" /locus_tag="PA3571" /db_xref="GeneID:878815" CDS 4003733..4004656 /gene="mmsR" /locus_tag="PA3571" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator MmsR" /protein_id="NP_252261.1" /db_xref="GeneID:878815" /translation="MDYIAEPATDMSHTSDWPLPADSLRLPIPAALLEKLAVHPLSRD LYPTSLGHYRRARDHRMSRERHDEHLLIYCSEGQGLLRVREGEAWREYRVGSGDLLWL PPGMAHDYAADDRQPWTIFWTHLRGDSATWLQHSAGYRDTPLRHWGLQHALLGGFEQL LEVRHSGYRFQHFLLAASRLRSLLCQLPLLRPLREGSLDLDGLHAYMREHLHARLELE RLAAFCNLSKFHFVSRYKAITGRTPIQHFLHLKIEYACQLLDSSDQSVARVGQAVGYD DSYYFSRLFSKVMGLSPSAYRQRVRQGEGGA" misc_feature 4003853..4004113 /gene="mmsR" /locus_tag="PA3571" /note="AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain; Region: cupin_MmsR-like_N; cd06986" /db_xref="CDD:380391" misc_feature <4004294..4004635 /gene="mmsR" /locus_tag="PA3571" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene 4004783..4004959 /locus_tag="PA3572" /db_xref="GeneID:878818" CDS 4004783..4004959 /locus_tag="PA3572" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252262.1" /db_xref="GeneID:878818" /translation="MNILVRPSQTPKGQCWQVCLDQQAVNFRSESEARRFVDRLEARL RAPHVLPELKQRTA" gene complement(4004967..4006145) /locus_tag="PA3573" /db_xref="GeneID:878819" CDS complement(4004967..4006145) /locus_tag="PA3573" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_252263.1" /db_xref="GeneID:878819" /translation="MNLRILLILGALSAFGPLAIDFYLPSFPTLAKAFATDVEHVQLS LAAYFAGLSIGQLLYGPVADRYGRRLPLLVGVSIFTLASAACALAPSLEWLIAARFVQ ALGGCAGMVISRAVVRDLCDPIGAAKAFSQLMLVMGLAPILAPVAGGLLLDWQGWQSI FVCLTLFAALAGLGVALWLPETIPADGERPPLSGALGQYRRLFADRLFLAYGLSGGVA MAGMFAYIAGSPYVFIQLYGIPAEHYGWLFGSNAAGFIVMAQVNARLLRYRGPAFWLR RIIWGYLACGLALLGIASLQPATLWPLLVPLFGCVASLGCIIPNASACAMAGQGQHAG SASALMGSLQFSVAAGASALVGVLHDGTAIPMTLVIAVCGAVATLLAWQTGRLERQAA " misc_feature complement(4005000..4006130) /locus_tag="PA3573" /note="Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_MdfA_MDR_like; cd17320" /db_xref="CDD:340878" misc_feature complement(order(4005111..4005113,4005468..4005470, 4005477..4005479,4005723..4005728,4005735..4005737, 4005828..4005830,4005999..4006004,4006011..4006013, 4006083..4006088,4006095..4006100)) /locus_tag="PA3573" /note="chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340878" gene 4006510..4007148 /gene="nalD" /locus_tag="PA3574" /db_xref="GeneID:880183" /db_xref="PseudoCap:PA3574" CDS 4006510..4007148 /gene="nalD" /locus_tag="PA3574" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252264.1" /db_xref="GeneID:880183" /db_xref="PseudoCap:PA3574" /translation="MRRTKEDSEKTRTAILLAAEELFLEKGVSHTSLEQIARAAGVTR GAVYWHFQNKAHLFNEMLNQVRLPPEQLTERLSGCDGSDPLRSLYDLCLEAVQSLLTQ EKKRRILTILMQRCEFTEELREAQERNNAFVQMFIELCEQLFARDECRVRLHPGMTPR IASRALHALILGLFNDWLRDPRLFDPDTDAEHLLEPMFRGLVRDWGQASSAP" misc_feature 4006513..4007121 /gene="nalD" /locus_tag="PA3574" /note="DNA-binding transcriptional regulator EnvR; Provisional; Region: PRK09975" /db_xref="CDD:182177" gene complement(4007127..4007324) /locus_tag="PA3574a" /db_xref="GeneID:17373374" CDS complement(4007127..4007324) /locus_tag="PA3574a" /codon_start=1 /transl_table=11 /product="copper chaperone CopZ" /protein_id="YP_008719768.1" /db_xref="GeneID:17373374" /translation="MQVFKVQGMTCGHCVRAITHAVQAKDSAADVQVDLGAGEVRVAS RLDSTQVLEAIREEGYGAELA" misc_feature complement(4007130..4007324) /locus_tag="PA3574a" /note="Copper chaperone CopZ [Inorganic ion transport and metabolism]; Region: CopZ; COG2608" /db_xref="CDD:442020" gene 4007507..4008037 /locus_tag="PA3575" /db_xref="GeneID:880184" CDS 4007507..4008037 /locus_tag="PA3575" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252265.1" /db_xref="GeneID:880184" /translation="MSIRRYSPSQIALHWLSAVAVLLIIALPYGADFFAGLLGGKGNV FTLHKSLGVAVLLLTLTRLALRRIQGVPDTLEGNPDWQRAAAKAGHFLLYAVLIVMPL SGMLAGKRPLDLFWLVQIGPFDLPEAVKAFAGGTHVTVQYLLFALILGHAAAAIWHHR VQKDDVLRAMLPQRGA" misc_feature 4007510..4008031 /locus_tag="PA3575" /note="Cytochrome b561 [Energy production and conversion]; Region: CybB; COG3038" /db_xref="CDD:442272" gene 4008136..4008558 /locus_tag="PA3576" /db_xref="GeneID:879657" CDS 4008136..4008558 /locus_tag="PA3576" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252266.1" /db_xref="GeneID:879657" /translation="MFSILRPLLHTAALACALPALAADPQPASGGWAQPDPAPIGYAV LNVSRERVESGTACDVGLYVHDELVGNLQPGASLALNLQPGAVDVRLAPNGPGDACRN GMTILAGQTLTLRAGEIRNLRITLGAGGLYLAPVADGY" protein_bind complement(4008605..4008617) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(4008938..4009051) /locus_tag="PA3577" /db_xref="GeneID:879658" CDS complement(4008938..4009051) /locus_tag="PA3577" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252267.1" /db_xref="GeneID:879658" /translation="MPSEWQGESFGRLQKELAWKVETRGQGKHDKQLEQQT" gene complement(4009542..4010327) /locus_tag="PA3578" /db_xref="GeneID:880177" CDS complement(4009542..4010327) /locus_tag="PA3578" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252268.1" /db_xref="GeneID:880177" /translation="MQLEFHQVDAFSSRPFSGNPAVVYRLDAWLADELMQMIATEHNL SETAFVVREGEAWRIRWFTPSVEVALCGHATLAAAHVLFEVYDEPGERLEFISRSGAL RVNREDERLVLDFPAQYPSEVGSTVELEQALGLPPVDVLGSTDKLLVLLESEEAVRAC RPDFAALARLPWRGVIVTARGLQKDFVSRFFAPAMGVDEDPVTGSAHCSLIPYWAQRL NKLSLTAQQCSARGGELWCRLEGERVSIAGHAVLVASGRIRLS" misc_feature complement(4009548..4010327) /locus_tag="PA3578" /note="Predicted epimerase YddE/YHI9, PhzF superfamily [General function prediction only]; Region: YHI9; COG0384" /db_xref="CDD:440153" gene complement(4010523..4012007) /locus_tag="PA3579" /db_xref="GeneID:880178" CDS complement(4010523..4012007) /locus_tag="PA3579" /EC_number="2.7.1.30" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycerol kinase" /protein_id="NP_252269.1" /db_xref="GeneID:880178" /translation="MSHYLLAIDQGTTSSRAIVFSAQGLPVASCQQEFKQYFPKDGWV EHDGEEIWLTTLQVCRDALARKGLRAADIAAIGITNQRETTLVWDAASGDLIHPAIVW QDRRTADYCAELKAAGHEANVSARTGLLIDPYFSATKLRWILDNVPGARQRAERGELR FGTVDCFLLWRLTGGRSHRTDATNASRTLLFNIHSQDWDEELLALFEIPRSLLPEVLD CAAEFGVSEPSLLGAAIPVLGMAGDQQAALIGQACFQPGMVKSTYGTGCFMIQNTGEQ PVTSKNRLLTTVGYRLDGKVSYAVEGSIFVAGAAVQWLRDGIKLIDHAHESEALAIQA GDSNGVYLVPAFTGLGAPYWDPKARGAIFGLTRDTGIKEIVTAGLQSVCYQTRDLLEA MRQDGTPPSALRVDGGMVVNNWMMQFLTDILGVTVERPEVTETTALGVAYMAGLKAGF YRDLDDIASHWHLQRRFAAHMAEERRGELYAGWQNAVRRVRSEA" misc_feature complement(4010526..4012007) /locus_tag="PA3579" /note="Glycerol kinase [Energy production and conversion]; Region: GlpK; COG0554" /db_xref="CDD:440320" gene complement(4012071..4012541) /locus_tag="PA3580" /db_xref="GeneID:880151" CDS complement(4012071..4012541) /locus_tag="PA3580" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252270.1" /db_xref="GeneID:880151" /translation="MTPAIDLLKKARAAHKVLSYSHDPKAPSYGLEAAEKLGLDPQRV FKTLLAATEKGELLVAVVPVIGSLDLKALAHAAGAKKADMADPQAAQRATGYLVGGIS PLGQKKRLRTFIDESARQYPSIHVSAGRRGLEVELAAEVLAQLTQGSFAAIGRE" misc_feature complement(4012083..4012541) /locus_tag="PA3580" /note="This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins. These trans-acting, single-domain proteins are homologs of ProX and also the cis-acting prolyl-tRNA synthetase (ProRS)...; Region: YbaK_deacylase; cd00002" /db_xref="CDD:237976" misc_feature complement(order(4012161..4012163,4012242..4012247, 4012404..4012406)) /locus_tag="PA3580" /note="putative deacylase active site [active]" /db_xref="CDD:237976" gene 4012806..4013645 /gene="glpF" /locus_tag="PA3581" /db_xref="GeneID:880152" CDS 4012806..4013645 /gene="glpF" /locus_tag="PA3581" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glycerol uptake facilitator protein" /protein_id="NP_252271.1" /db_xref="GeneID:880152" /translation="MTTAAPTPSLFGQCLAEFLGTALLIFFGTGCVAALKVAGASFGL WEISIIWGVGVSMAIYLSAGVSGAHLNPAVSIALWLFAGFEGRKLPFYITAQVAGAFC AAALVYTLYSSLFIEFEQAQNIVRGSQDSLALASVFSTYPHPALSVGQAFLVEVVITA ILMAVIMALTDDGNGLPRGPLAPLLIGLLIAVIGSAMGPLTGFAMNPARDFGPKLMTY LAGWGPIAFTGGREIPYFLVPIFAPILGACLGAGGYRVLIARHLPSAAAPAEAEPEKV RAS" misc_feature 4012830..4013582 /gene="glpF" /locus_tag="PA3581" /note="Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) [Carbohydrate transport and metabolism]; Region: GlpF; COG0580" /db_xref="CDD:440345" gene 4013685..4015202 /gene="glpK" /locus_tag="PA3582" /db_xref="GeneID:880162" CDS 4013685..4015202 /gene="glpK" /locus_tag="PA3582" /EC_number="2.7.1.30" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glycerol kinase" /protein_id="NP_252272.1" /db_xref="GeneID:880162" /translation="MTDKHNKKYVVALDQGTTSSRAIVFDRDANVVSQAQREFAQFYP QAGWVEHDPMEIWATQSSTLVEALAQASIEHDQVAAIGITNQRETTVVWDRHSGRPIH NAIVWQCRRSAAICAQLKRDGLEDYIRETTGLVTDPYFSGTKLKWILDNVEGARERAR NGDLLFGTIDTWLIWKLTEGKVHVTDYTNASRTMLFNIHSRDWDARMLEVLDIPRSML PEVRNSSEVYGNARIGGVGGGELPIAGIAGDQQAALFGQMCVEPGQAKNTYGTGCFLL MHTGDKAVKSTHGLLTTIACGPRGEVGYALEGAVFNGGSTVQWLRDELKVINDSFDSE YFATKVKDSNGVYLVPAFTGLGAPYWDPYARGAVFGLTRGVKADHLIRATLESIAYQT RDVLDAMQRDAGERLRALRVDGGAVANNFLMQFQADILGTRVERPVMRETTALGAAYL AGLACGFWSSLDELKSKAVIERVFEPECDEPRREKLYAGWKKAVERTRGWDDGEL" misc_feature 4013700..4015184 /gene="glpK" /locus_tag="PA3582" /note="glycerol kinase GlpK; Region: glpK; PRK00047" /db_xref="CDD:234594" gene 4015408..4016163 /gene="glpR" /locus_tag="PA3583" /db_xref="GeneID:880163" CDS 4015408..4016163 /gene="glpR" /locus_tag="PA3583" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate regulon repressor" /protein_id="NP_252273.1" /db_xref="GeneID:880163" /translation="MNLPPRQQSIIEEVRERGYLSIEEMAQMFAVTPQTIRRDINQLA EQGLLRRYHGGAAYDSSIENTAYTMRADQMRDEKQRIAEAVASLVPDNASLFINIGTT TEAIARALLNHRNLKIITNNLHVAATLSAKEDFEVLVAGGTVRSDGGIVGQAAVDFIQ QFRVDFALVGISGIDEDGSLLDFDYQEVRVSQAIIDNARQVFLAADSSKFGRNAVVRL GPISLVNRVISDSPPPAAIARLMAQHKVHLDLV" misc_feature 4015408..4016157 /gene="glpR" /locus_tag="PA3583" /note="DeoR/GlpR family transcriptional regulator; Region: PRK10906" /db_xref="CDD:182827" gene 4016441..4017979 /gene="glpD" /locus_tag="PA3584" /db_xref="GeneID:880179" CDS 4016441..4017979 /gene="glpD" /locus_tag="PA3584" /EC_number="1.1.5.3" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate dehydrogenase" /protein_id="NP_252274.1" /db_xref="GeneID:880179" /translation="MSQAHTPSAPLAEVYDVAVVGGGINGVGIAADAAGRGLSVFLCE QHDLAQHTSSASSKLIHGGLRYLEHYEFRLVREALAEREVLLAKAPHIVKPLRFVLPH RPHLRPAWMIRAGLFLYDHLGKREKLPASRGLRFTGSSPLKAEIRRGFEYSDCAVDDA RLVVLNAISAREHGAHVHTRTRCVSARRSKGLWHLHLERSDGSLYSIRARALVNAAGP WVARFIQDDLKQKSPYGIRLIQGSHIIVPKLYEGEHAYILQNEDRRIVFAIPYLDRFT MIGTTDREYQGDPAKVAISEEETAYLLQVVNAHFKQQLAAADILHSFAGVRPLCDDES DEPSAITRDYTLSLSAGNGEPPLLSVFGGKLTTYRKLAESALTQLQPFFANLGPAWTA KAPLPGGEQMQSVEALTEQLANRYAWLDRELALRWARTYGTRVWRLLDGVNGEADLGE HLGGGLYAREVDYLCKHEWAQDAEDILWRRSKLGLFLSPSQQVRLGQYLQSEHPHRPR VHAA" misc_feature 4016531..4017973 /gene="glpD" /locus_tag="PA3584" /note="glycerol-3-phosphate dehydrogenase; Reviewed; Region: glpD; PRK12266" /db_xref="CDD:237027" gene 4018112..4018441 /gene="glpM" /locus_tag="PA3585" /db_xref="GeneID:880180" CDS 4018112..4018441 /gene="glpM" /locus_tag="PA3585" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="membrane protein GlpM" /protein_id="NP_252275.1" /db_xref="GeneID:880180" /translation="MFKALIGAAVVVLLAVLSKTRNYYIAGLVPLFPTFALIAHYIVG KGRSLDDLKTTIVFGMWSIIPYFVYLAALYLLVERFRLETSLALAALAWLVAASVLVG LWVRLHA" misc_feature 4018115..4018435 /gene="glpM" /locus_tag="PA3585" /note="GlpM protein; Region: GlpM; cl27901" /db_xref="CDD:474981" gene complement(4018458..4019444) /locus_tag="PA3586" /db_xref="GeneID:880174" CDS complement(4018458..4019444) /locus_tag="PA3586" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_252276.1" /db_xref="GeneID:880174" /translation="MRAFIFLAALLCSLSSFAAARCDARVPTETVELGDVRLAYQSIG RDSDPALLLVMGLGGQLIHWPDEVVSALCEQGFRVIRYDNRDVGLSAWNVPVPSSRLT YEVVRYRLGLPVSAPYTLTDMAGDALHLLDALDIPQAHVLGASMGGMIAQHIADMAPQ RLLSLTLVMTSSGAEGLPAPSESLLRLLARREAASREQAVEQQADLLAALGSPEVRDD RQQLLLQAARSYDRAFNPEGVQRQLLAILAEPSRVPLLNRLQVPTLVIHGTADPLLPV MHGVHVAAHIRGSELKLIPGLAHRFQEAFKEPLLAAVVPYLKAHRQASVVQL" misc_feature complement(4018485..4019363) /locus_tag="PA3586" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene 4019743..4020663 /gene="metR" /locus_tag="PA3587" /db_xref="GeneID:880220" CDS 4019743..4020663 /gene="metR" /locus_tag="PA3587" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcriptional regulator MetR" /protein_id="NP_252277.1" /db_xref="GeneID:880220" /translation="MLELRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERL GMQLFVRKTKPVRFTSAGLRLLQLADSLLPQLRTAERDLARLAGGTAGRLHMAIECHS CFQWLMPTIDQFRDAWPEVELDLASGFSFAPLPALARGDLDLVVTADPVELPGITYVP LFTYEALLAVANQHALAGRPYVVPEDLERETLITYPVERDRLDVFTRFLDPADVEPAQ VRIAELTVMMMQLVASGRGVCCLPNWALHEYSSRGYVTARRLGEKGLYCTLFAAIRTD MFDAPFMRDFLLTAKDTSFATLEGVSAAKG" misc_feature 4019752..4019928 /gene="metR" /locus_tag="PA3587" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 4020019..4020612 /gene="metR" /locus_tag="PA3587" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator metR, which regulates the expression of methionine biosynthetic genes, contains type 2 periplasmic binding fold; Region: PBP2_MetR; cd08441" /db_xref="CDD:176132" misc_feature order(4020064..4020069,4020073..4020078,4020085..4020087, 4020097..4020099,4020103..4020123,4020397..4020414, 4020430..4020435,4020439..4020444) /gene="metR" /locus_tag="PA3587" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176132" gene complement(4020669..4021919) /locus_tag="PA3588" /db_xref="GeneID:880221" CDS complement(4020669..4021919) /locus_tag="PA3588" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="porin" /protein_id="NP_252278.1" /db_xref="GeneID:880221" /translation="MNNNKKCAFFLLPILAGDSVPALAEGFLEDSRASLALRNFYMNR DFRDGAGRAKSEEWAQGFLFDYRSGYTEGTLGVGLDLLGKLGVRLDSGAGRSGTGLLP LRDDGSAAGDYARLDATAKLRLSRSELKVGGLVPKLPTIQPNYGRLFPQVFQGALLTS GELSGLSLNLGRLTEVSQRNEAGTSDLALFNRNRRFAGAAQADRFDLAGLDYRIAPDW TGSYHYGELEQVYAQHFLGLKGRIGIAADSLESDLRLALSRDTGGARGGRIDNRSFSG SLTYRLRNGQAFGLGYQRMSGDHGFPYLEGTDPYLVNFGQYNDFAEAGESSWQLRYDC DFAPLGVPGLSLMTRYFSGHGAKPKGADGSREWERDSDLRYVLQGGALKGLGLVWRNA TYRSAFSRDIDENRLYLTYELPLF" misc_feature complement(4020678..4021847) /locus_tag="PA3588" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene complement(4021972..4023177) /locus_tag="PA3589" /db_xref="GeneID:880206" CDS complement(4021972..4023177) /locus_tag="PA3589" /EC_number="2.3.1.9" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyl-CoA acetyltransferase" /protein_id="NP_252279.1" /db_xref="GeneID:880206" /translation="MLDAYIYAGLRTPFGRHAGALSTVRPDDLAGLLLARLAETSGFA VDDLEDVILGCTNQAGEDSRNLARNALLAAGLPARLPGQTVNRLCASGLSAVIDAARA ISCGEGRLYLAGGAESMSRAPFVMGKAESAFSRTLEVFDSTIGARFANPRLVERYGND SMPETGDNVARAFGIAREDADRFAASSQARYQAALEEGFFLGEILPVEVRAGRKGETR LVERDEHPRPQADLAALARLPALFAGGVVTAGNASGINDGAAVVLLGDRAIGEREGIR PLARILASASVGVEPRLMGIGPQQAILRALQRAGIDLDEVGLIEINEAFAPQVLACLK LLGLDYEDPRVNPHGGAIALGHPLGASGARLVLTAARGLQRIERRYAVVSLCVGLGQG VAMVIERCR" misc_feature complement(4021975..4023177) /locus_tag="PA3589" /note="3-oxoadipyl-CoA thiolase; Region: PRK08131" /db_xref="CDD:181242" gene complement(4023200..4024732) /locus_tag="PA3590" /db_xref="GeneID:880207" CDS complement(4023200..4024732) /locus_tag="PA3590" /EC_number="1.1.1.157" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="3-hydroxyacyl-CoA dehydrogenase" /protein_id="NP_252280.1" /db_xref="GeneID:880207" /translation="MSEPSIVLIGIVGTGAMGQGIAQLAACAGLSVLLYDSRQGVALQ AREQIATVLARQVERGRLEAEAVERAMGNLRVVEDLRVLGGCQLVIEAIVENLEAKQA LFRQLEEVVGDEAILASNTSSLSVTAIASACRDPGRIAGLHFFNPVPLMRLVEVIEGL ATRTGIAERLCALVATFGHQAVRATDSPGFIVNHAGRAFGTEALRILGEGVAPVAAID EVLREGAGFRMGPFELFDLVGLDVSLPVMESIYRQYYEEPRYRPHPLLRQMLAAGRLG RKSGQGFYRYDGAGQVPVAAPAVAPGAALPPVWLGVDDEHDRAPLLMLLQRLGAEVES GERPSGAPLCLLAPLGADVSAAARRFAVDPTRSLAIDVLSDLERHRCLMACPATRAEL QQAARTLFARDGVGVTLIRDSAGFIVQRTLASIVNLACDIAQQGIASVEHIDLAVRLG LGYPLGPLEWGDRLGAGRVLRILERLHALSGDPRYRPSPWLRRRAQLGLSLRQPDSPL AS" misc_feature complement(4023215..4024732) /locus_tag="PA3590" /note="3-hydroxy-acyl-CoA dehydrogenase; Validated; Region: PRK08268" /db_xref="CDD:236211" gene complement(4024729..4025526) /locus_tag="PA3591" /db_xref="GeneID:880218" CDS complement(4024729..4025526) /locus_tag="PA3591" /EC_number="4.2.1.17" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="NP_252281.1" /db_xref="GeneID:880218" /translation="MDSSPGAVRPELVLLERPEQGVALLRLNRPAVLNALNMRLREAL AEHVRRLDECADTRVIVLTGNGTAFAAGADLNELAEASALEIQQRGVERHWQALAACR KPLIAAVEGHALGGGCELAMHCDLIVAGASARFAQPEIRVGVMPGAGGTQRLVRAVGK FQALRMLFTGCTVRAPEALAIGLVSEVAADGQALDRALELARQIAGLPPLALAQIKEV VLAGADLPLDQALALERKAFQLLFDSHDQKEGMRAFLEKRTAEYLGK" misc_feature complement(4024732..4025514) /locus_tag="PA3591" /note="enoyl-CoA hydratase; Provisional; Region: PRK08138" /db_xref="CDD:236162" misc_feature complement(order(4025101..4025103,4025110..4025115, 4025179..4025187,4025191..4025193,4025302..4025316, 4025326..4025328,4025422..4025424,4025428..4025430)) /locus_tag="PA3591" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(4025179..4025181,4025308..4025310)) /locus_tag="PA3591" /note="oxyanion hole (OAH) forming residues [active]" /db_xref="CDD:119339" misc_feature complement(order(4024915..4024920,4024927..4024929, 4024972..4024974,4024981..4024983,4025014..4025016, 4025023..4025028,4025032..4025037,4025041..4025046, 4025059..4025064,4025068..4025076,4025080..4025082, 4025098..4025109,4025143..4025154,4025215..4025217)) /locus_tag="PA3591" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene complement(4025586..4026773) /locus_tag="PA3592" /db_xref="GeneID:880219" CDS complement(4025586..4026773) /locus_tag="PA3592" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252282.1" /db_xref="GeneID:880219" /translation="MTNQTGALRGLKIIDLSRVLGGPYCSQALADHGAEVIKLEPLGG DETRGWGPPFEGDTASYFKGVNRNKKGIAVDLATAEGIELLLRLLEDADVLLENFKPG TLARWGIGYEEVLRQRFPRLVHCAVSGFGADGPLGGLPGYDAAIQAMAGLMSVNGEAG GDALRIGLPIVDMVTGLNAMAGILLALHERQVSGRGQSVDITLYDCGISLLHPHLPNY FASGRTPRRSGNAHPNIAPYDSYRTGTEPIFLAVGNDRQFARLCEYLGADELPGDPRF ADNGKRSVNREALKRALEDYLAAHDGRELAERLIRLGVPCGAIATVDRVVEHPHTRHR GMVVELEGYRGIASPVKLSRTPASYRAAPPVLGGDTREVLAELGLSAEAIDALVRRGI VRA" misc_feature complement(4025592..4026770) /locus_tag="PA3592" /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]; Region: CaiB; COG1804" /db_xref="CDD:441409" gene complement(4026812..4028539) /locus_tag="PA3593" /db_xref="GeneID:880210" CDS complement(4026812..4028539) /locus_tag="PA3593" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_252283.1" /db_xref="GeneID:880210" /translation="MTAMPEILREDTLNIPDSRGLNLYTCDPALERLLEVYLPPALLA EWRPLLERLGARAGGELDVLALAADKNPPVLAPRTRRGEDLQSIRKHPDYVALERVAY AELGLASMSHRPDGPPPLVKYALTHLFVQAEFGLCCPVSMTDSLTRTLRRFGAPELVE RYLPSLASRDFDELFQGAMFMTEQAAGSDVARTRTVAREQGGEWKLYGDKWFCSNPDA DLAMVLARPEGAPEGMKGVTLFLLPKVREDGTRNAYRIVRLKDKLGSRSMASGEVRLE GASAYLIGEIGRGFQQMADMVNMSRLSNGVRAAGLMRRALSEALFVARHRRAFGKHLI DMPLMQKQLLKMMLPTEQARSMFMQIATLLPRADGGEVEAQKCVRILTPLIKFRACRD ARRVTGDAMEVRGGVGYIEEWSDPRLVRDAHLGSIWEGTSNIVALDVARAVSREQALE PLQRHLRRLLDDSDLPGDARDLFDELLVRVVATMADVAERRQDEQVRQAGSALYHLCT AIFMAWEASRQAPDQRRLALAFLVARHKLLPRDPLHLEGWTDQAELLARVVGEVPLSQ AEAMQLLPA" misc_feature complement(4027205..4028470) /locus_tag="PA3593" /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933" /db_xref="CDD:447864" misc_feature complement(order(4027241..4027243,4027247..4027249, 4027253..4027261,4027898..4027900,4027904..4027906, 4027997..4027999,4028003..4028005,4028105..4028107)) /locus_tag="PA3593" /note="active site" /db_xref="CDD:173843" gene 4028653..4029540 /locus_tag="PA3594" /db_xref="GeneID:880211" CDS 4028653..4029540 /locus_tag="PA3594" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252284.1" /db_xref="GeneID:880211" /translation="MDLRQLRYFIAVAEELHFGRAAARLFISQPALSFDIKKLEEQLG TQLLLRNNKSVKLTGAGQVLLVEARNLLLQAEKVKRLTQLSAEGDVGQLRVGFVNSML YRGLPRAMSRFEREHPNMEVVLGEMNSAEQAQALQRGQIDLGFVHWGRLPAEIVSEPL ISDPFLCCLPAGHRLAGQARLDLAELRDEDFILFPRHVSPHYHDLIIARCVDAGFSPR IRHEARLWQTVAAMVGLGMGVALIPETLCLAWRNEVRYLEIEPAGARSEIHAILPASE PSRAAQAFLATLKSGLDDA" misc_feature 4028659..4028838 /locus_tag="PA3594" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 4028926..4029516 /locus_tag="PA3594" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to regulators involved in the catabolism of aromatic compounds, contains type 2 periplasmic binding fold; Region: PBP2_LTTR_aromatics_like_2; cd08448" /db_xref="CDD:176139" misc_feature order(4028941..4028943,4028962..4028964,4028971..4028976, 4028980..4028985,4028992..4028994,4029016..4029018, 4029022..4029024,4029028..4029030,4029160..4029162, 4029262..4029267,4029322..4029327,4029343..4029348, 4029352..4029357,4029409..4029411) /locus_tag="PA3594" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176139" misc_feature order(4028944..4028946,4029091..4029093,4029232..4029237, 4029256..4029258) /locus_tag="PA3594" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176139" gene 4029759..4031168 /locus_tag="PA3595" /db_xref="GeneID:880129" CDS 4029759..4031168 /locus_tag="PA3595" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_252285.1" /db_xref="GeneID:880129" /translation="MPRTPSPEDADLHKKARRAGIASFIGTTIEWYDFYIYGLAAALV FGKVFFPADMDPGLATLLSFVTLWSGFIARPLGGIIFGHLGDRIGRKTTLVITLIMMG IATTCIGLLPVYTQIGIWAPISLVALRIVQGIAVGGEWGGAILIASESAPKGKGILYA AFAQQGSPTGNLLATLAFFALSALPASDFILWGWRAPFLLSAVLVIVGMVIRLKLEES EDMKRVLAQKRTVKLPLAEVLGKHWKIVLLGAGVLPIIHVTYFKSTFALSWATKTLGY SQGTFLSIIVVALVVQFLSQPLGALLTSRIDMRKAACLMVLPEFILMPAMFFAVETKV YWIAAVGMCLATVPHAMFYGAVGGILARAFPARVRYTGLSLAYQLCSLLVGGGTPVLA QWILNSTGSIVGVALASACYALVSLACTLALLRITGFHASDLSTAERADAEDLQRPVA VEREPVLRAPARLLGGDPG" misc_feature 4029807..4031021 /locus_tag="PA3595" /note="Shikimate transporter and similar proteins of the Major Facilitator Superfamily; Region: MFS_ShiA_like; cd17369" /db_xref="CDD:340927" misc_feature order(4029846..4029851,4029858..4029863,4029870..4029872, 4029990..4029992,4030164..4030169,4030173..4030181, 4030188..4030190,4030248..4030250,4030257..4030262, 4030269..4030271,4030515..4030517,4030524..4030529, 4030536..4030541,4030548..4030550,4030632..4030634, 4030644..4030646,4030800..4030805,4030815..4030817, 4030827..4030829,4030875..4030877,4030884..4030889, 4030896..4030901,4030908..4030910) /locus_tag="PA3595" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340927" gene complement(4031165..4032238) /locus_tag="PA3596" /db_xref="GeneID:880130" CDS complement(4031165..4032238) /locus_tag="PA3596" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="methylated-DNA--protein-cysteine methyltransferase" /protein_id="NP_252286.1" /db_xref="GeneID:880130" /translation="MSHAALFLPLPDDDTLYAALLARDPAYDGFAFVGVKSTGVFCRL TCPARKPKRENTLFFDSIKGCVEAGFRPCLRCRPLERLGTQGPLVSDLLQRLGRQPQR RWFEDDLAALGYDPSTVRRAFKREFGVTFLEMARLRRLGQVAERLSSGARVIDAQLDA SFDSDSGFRSAFARLLGEPPSQLRGRELLKADWLQTPLGAMLAVADAQALHLLEFFDR PALSGELKRLQKSSGSSIGFGRFASIDRIEAELADYFGGTPVRFQTPLALNASAFTRT VWQALREVPCGSTQSYAGLARSIGSPSSVRAVARANGANQIAIVIPCHRVIGSDGSLT GYGGGLWRKRWLLEHERRMGAAG" misc_feature complement(4031171..4032214) /locus_tag="PA3596" /note="Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains [Replication, recombination and repair]; Region: AdaA; COG2169" /db_xref="CDD:441772" gene complement(4032328..4033650) /locus_tag="PA3597" /db_xref="GeneID:880202" CDS complement(4032328..4033650) /locus_tag="PA3597" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_252287.1" /db_xref="GeneID:880202" /translation="MARLKRTLSLGSVVLFGIAYMTPIIVLGTFGILAETTQGHVPAA YIAASLAMLFTALSYGRMAAAFPVAGSAYTYVRKAIDSRLGFIAGWAVLLDYLFLPMA IWLIGAAYLHSAFPAVPNAVWVLAFIGVTTTINIVGLRLAKNVNGLLMLVQFLVLGAF VALCVHYVLGDPGKPLWSLQPLLGGDLQVPLVMSGAAIACYSFLGFDAVSTLTEETRD PRRNIPRAILLITLLGGLIFIVTSYFVQLAHPSFAFDSADSAAYEIARNIGGDLFVTF FLVGLIVGQFTSGLSAQASASRLLFAMGRDGVLPRPFFGRLGKRFETPANSIILCGVV ALLALQMDVTTSTSFINFGAFLAFSLVNLSVVFHYYLGAERRGPRETLLFLVFPGIGL VADLWLMASLDHLAIILGLCWLALGAVYLAAITHGFREPPPEMRFEEG" misc_feature complement(4032385..4033650) /locus_tag="PA3597" /note="Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; Region: PotE; COG0531" /db_xref="CDD:440297" gene complement(4033850..4034665) /locus_tag="PA3598" /db_xref="GeneID:880203" CDS complement(4033850..4034665) /locus_tag="PA3598" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252288.1" /db_xref="GeneID:880203" /translation="MKVELVQIAGRDGDTAHNLERALAAIADCAADTELVVFPETHLT GFPSEDNIAALAEPLDGPTVSAVQRVARERNVSVAIGIAEADAGRYYNTTLLIAPDGI ALKYRKTHLWASDRGIFTPGDRYATALWNGIRVGLLVCFDIEFPESARALGQLGAELI IVTNGNMDPYGPTHRTAIMARAMENQAYAVMVNRVGHGDGGLVFAGGSAVVDPYGQLL CEAGREECRQIVELDLGRLQDARRDYRYLEERRLVLPGERREHPDGLRELLIP" misc_feature complement(4033913..4034662) /locus_tag="PA3598" /note="Pseudomonas sp. MCI3434 R-amidase and related proteins (putative class 13 nitrilases); Region: R-amidase_like; cd07576" /db_xref="CDD:143600" misc_feature complement(order(4034171..4034173,4034234..4034239, 4034243..4034248,4034321..4034323,4034330..4034332, 4034342..4034344,4034546..4034548)) /locus_tag="PA3598" /note="putative active site [active]" /db_xref="CDD:143600" misc_feature complement(order(4034246..4034248,4034342..4034344, 4034546..4034548)) /locus_tag="PA3598" /note="catalytic triad [active]" /db_xref="CDD:143600" misc_feature complement(order(4033913..4033924,4034045..4034050, 4034114..4034119,4034123..4034131,4034135..4034140, 4034213..4034218,4034225..4034239,4034243..4034245, 4034297..4034305,4034324..4034326,4034330..4034341)) /locus_tag="PA3598" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:143600" gene 4034793..4035578 /locus_tag="PA3599" /db_xref="GeneID:880141" CDS 4034793..4035578 /locus_tag="PA3599" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252289.1" /db_xref="GeneID:880141" /translation="MSFTLQDIAWHRSVGQLVEALDAPDFWIRLVRLLEQYVPFDSWV ALLFSQGRPQVFAECPGADGGPDPLFQDYLRGLYLLDPFYIASRENPCSGLFRLADVA PECFEQTDYYQRYFRLNVVADEIQINVQLSGERTLCLSLGSRRRFTPEQLAVLGLVRP WVAGLMRQRLAFEDEVLNSPAAPEPGWQGSLEKVAEQMGTPLTARELEVGRLMLSGCS SKEIARKLAISAETVKVHRKHMYGKLGIKSQSELFGLFLQAQG" misc_feature <4035156..4035566 /locus_tag="PA3599" /note="DNA-binding transcriptional regulator, CsgD family [Transcription]; Region: CsgD; COG2771" /db_xref="CDD:442052" misc_feature <4035396..4035569 /locus_tag="PA3599" /note="DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains [Signal transduction mechanisms, Transcription]; Region: CitB; COG2197" /db_xref="CDD:441799" gene complement(4035606..4035758) /locus_tag="PA3600" /db_xref="GeneID:880142" CDS complement(4035606..4035758) /locus_tag="PA3600" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L36" /protein_id="NP_252290.1" /db_xref="GeneID:880142" /translation="MKVLASLKQAKLRHRDCQVVKRRGRLYVICKSNPRFKCVQGRPK PKIKRR" misc_feature complement(4035636..4035758) /locus_tag="PA3600" /note="50S ribosomal protein L36; Validated; Region: rpmJ; PRK00831" /db_xref="CDD:179138" gene complement(4035758..4036021) /locus_tag="PA3601" /db_xref="GeneID:880137" CDS complement(4035758..4036021) /locus_tag="PA3601" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L31 type B" /protein_id="NP_252291.1" /db_xref="GeneID:880137" /translation="MKPGIHPEYRPVLFHDTSADVYFLIGSTAETDKTHTHTDGKTYP YVTLDVSSASHPVYTGEQRKTKSEGRVAGFNKRFAGFVGGKGA" misc_feature complement(4035761..4036021) /locus_tag="PA3601" /note="type B 50S ribosomal protein L31; Region: rpmE2; PRK01678" /db_xref="CDD:234969" gene 4036265..4037875 /locus_tag="PA3602" /db_xref="GeneID:880138" CDS 4036265..4037875 /locus_tag="PA3602" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252292.1" /db_xref="GeneID:880138" /translation="MNLSLLSRYAFFACIALFTLLSLPFLGSTEWLWPFTLLGVALSL LGLFDLIQTPHAVRRNYPILGNIRYLVEGIRPEIRQYLLEADGDALPFSRAQRSLVYS RAKNESSEKPFGTLIDVYTAGYEFISHSMRPAPLSDPCEFRVDIGGPQCSKPYSASLF NVSAMSFGALSANAIRSLNRGAQMGNFYHDTGEGSISPYHRENGGDLVWELGSGYFGC RTRDGKFDPERFAAQALDPQVKMIEIKLSQGAKPGHGGILPKHKVTPEIAATRGVPMG EDCVSPSRHSAFSTPIELMQFIAQLRELSGGKPVGFKFCLGHPWEFMGIAKAMLETGI LPDFIVVDGKEGGTGAAPLEFTDHIGVPLREGLLFVHNTLVGLNLRDKIKVGASGKIV SAFDIASVLATGADWANSARGFMFAIGCIQSQSCHTNKCPTGVATQDPLRQRALVVPD KAERVRNFHRNTLKGLAEMLAAAGLEHPSQLEAKHLVRRITDTEIRLFSQLHYFLKPG ELLSGKIEGEFYERMWNMARADSFDAAA" misc_feature 4036277..4037872 /locus_tag="PA3602" /note="Glutamate synthase domain 2 [Amino acid transport and metabolism]; Region: GltB2; COG0069" /db_xref="CDD:439839" gene complement(4037945..4038316) /gene="dgkA" /locus_tag="PA3603" /db_xref="GeneID:880149" CDS complement(4037945..4038316) /gene="dgkA" /locus_tag="PA3603" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="diacylglycerol kinase" /protein_id="NP_252293.1" /db_xref="GeneID:880149" /translation="MSPSPFKGQTGLKRILNATGYSLAGFLAAFRGEAAFRQLVLLNV VLIPVAFLLDVSRGERALMIAVCLLALIVELLNSAIEATVDRVSLERHPLSKNAKDMG SAAQFVALTVITVTWATILLG" misc_feature complement(4037954..4038280) /gene="dgkA" /locus_tag="PA3603" /note="Integral membrane diacylglycerol kinase; Region: DAGK_IM; cd14264" /db_xref="CDD:260133" misc_feature complement(order(4038002..4038004,4038008..4038013, 4038017..4038025,4038059..4038064,4038074..4038076, 4038083..4038088,4038095..4038097,4038200..4038202, 4038206..4038208,4038215..4038217,4038242..4038244, 4038251..4038253,4038263..4038265,4038278..4038280)) /gene="dgkA" /locus_tag="PA3603" /note="putative active site [active]" /db_xref="CDD:260133" misc_feature complement(order(4037957..4037962,4037969..4037971, 4037981..4037983,4037990..4037995,4038002..4038007, 4038014..4038016,4038023..4038025,4038032..4038037, 4038041..4038043,4038056..4038061,4038065..4038073, 4038077..4038085,4038089..4038094,4038098..4038103, 4038113..4038115,4038122..4038124,4038131..4038136, 4038140..4038148,4038230..4038235,4038239..4038259)) /gene="dgkA" /locus_tag="PA3603" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:260133" misc_feature complement(order(4038017..4038022,4038062..4038064, 4038074..4038076,4038095..4038097,4038218..4038220, 4038245..4038247)) /gene="dgkA" /locus_tag="PA3603" /note="putative active site [active]" /db_xref="CDD:260133" misc_feature complement(order(4038074..4038076,4038218..4038220)) /gene="dgkA" /locus_tag="PA3603" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:260133" gene complement(4038388..4039041) /gene="erdR" /locus_tag="PA3604" /db_xref="GeneID:880150" CDS complement(4038388..4039041) /gene="erdR" /locus_tag="PA3604" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="response regulator ErdR" /protein_id="NP_252294.1" /db_xref="GeneID:880150" /translation="MASYEILIADDHPLFRSALHQALTLGLGPDVRLVEAASIAELEA RLNEKADWDLVLLDLNMPGAYGFSGLVLLRGQYPQVPVVMISAQEEAAVVQRSREFGA SGFIPKSSPLETLQQAVRAVLDGDTWWPPQDAAAEALSEEAKAASAGLASLTPQQFRV LTMVCEGLLNKQIAYDLNVSEATVKAHVTAIFRKLNVRTRTQAALLLQQMETVPASH" misc_feature complement(4038673..4039026) /gene="erdR" /locus_tag="PA3604" /note="phosphoacceptor receiver (REC) domain of NarL (Nitrate/Nitrite response regulator L) family response regulators; Region: REC_NarL-like; cd17535" /db_xref="CDD:381090" misc_feature complement(4038421..4038594) /gene="erdR" /locus_tag="PA3604" /note="helix_turn_helix, Lux Regulon; Region: HTH_LUXR; smart00421" /db_xref="CDD:197715" gene 4039174..4040100 /locus_tag="PA3605" /db_xref="GeneID:880194" CDS 4039174..4040100 /locus_tag="PA3605" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252295.1" /db_xref="GeneID:880194" /translation="MADPPRPVERAMRSQALRADVLMLITAMIWGVSFVAQRLGMDAI GPFLYTGLRFVLGALVLVPLLMLRSRRDGAQPFNRGQLLAGVILGVALTTGINLQQVG LLFTSVTNSGFITGLYVIVVPLLGLLFGQRTGAGTWLGASLAVLGMALLSIGPGFQVA SGDWLQLAGAVVWGAHVLLVGLFASRYDPIRLAFLQFATCAAVSLLLALVFEEIHWDA IVQAGPALLYGGLLGVGTGFTLQVVAQKHAIASHAAIILSLEAVFAAIAGALFLAETL HLRGYFGCALMLAGMLVAQLWPRKLAAEARPA" misc_feature 4039222..4040082 /locus_tag="PA3605" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene complement(4040104..4040820) /locus_tag="PA3606" /db_xref="GeneID:880195" CDS complement(4040104..4040820) /locus_tag="PA3606" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252296.1" /db_xref="GeneID:880195" /translation="MSHAVSRLRQERLARSLKPFVARGSRMPRCEGCRLLPSYCMCAW RPRVEARAGMCLVMHDIEALKPTNTGWLIADTVADTFAFGWSRTEVDPRLLELLADPQ WQPYLVFPGEYVAAERVVNEVAPLVEGKRPLFILLDATWTEARKMFRKSPYLEPFPVL SLLPEQLSRYRLRRSTRGEHLCTAEVAALCLELAGDEAAGEALGAYLEVFSERYLGAK RHIPLDEASPAHRALAPFRG" misc_feature complement(4040125..4040757) /locus_tag="PA3606" /note="tRNA U47 aminocarboxypropyltransferaseTapT/TuaA/ YfiP, DTW domain [Translation, ribosomal structure and biogenesis]; Region: TapT; COG3148" /db_xref="CDD:442382" gene 4041079..4042170 /gene="potA" /locus_tag="PA3607" /db_xref="GeneID:880429" CDS 4041079..4042170 /gene="potA" /locus_tag="PA3607" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="polyamine transporter ATP-binding protein PotA" /protein_id="NP_252297.1" /db_xref="GeneID:880429" /translation="MTPPLLEIRNVTRRFGDFTAVDNVSLTINTGEFFTLLGPSGCGK TTLLRMLAGFDQPDSGEIRLNGQDLAGVEPEKRPVHTVFQSYALFPHMSVAQNIAFPL KMAGVAKSEIDARVEQALKDVRLADKGGRMPTQLSGGQRQRVAIARALVNRPRLLLLD EPLSALDAKLREEMQIELINLQKDVGITFVYVTHDQGEALALSHRIAVMNQGRVEQLD APETIYSFPRSRFVADFIGQCNLLDATVEAVDGERVRIDLRGLGEVQALKSFDAQPGE ACVLTLRPEKIRLAQSVTADSDEVHFRGRVAELLYLGDVTLYIVELENGERLETLLPN ATPGRAKFFEVGDAVEAAWRFDAGHLVRA" misc_feature 4041079..4042167 /gene="potA" /locus_tag="PA3607" /note="ABC-type Fe3+/spermidine/putrescine transport systems, ATPase component [Amino acid transport and metabolism]; Region: PotA; COG3842" /db_xref="CDD:443052" gene 4042175..4043068 /gene="potB" /locus_tag="PA3608" /db_xref="GeneID:880430" CDS 4042175..4043068 /gene="potB" /locus_tag="PA3608" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="polyamine ABC transporter permease PotB" /protein_id="NP_252298.1" /db_xref="GeneID:880430" /translation="MRKNLGKWLLVWPPQAYLLFFFLVPALIMLFASFRFPGDYGGLA PWMYSEDGQTVYDLSVENYTRLTESWVYLQLFVKSFGYALVTTLACLLLAYPVATTLA RAPAKWRNLLILLVILPFWSNLLVRVYAWMIILSPSGALTRGINAALDLFGAQPISLM FTPFAVILCMVYVHLPFMILPLYANLEKHDPALLDAAQDLGAGRWQRFWRVTFPLSLP GVAAGAALVFIPVLGMFAIPDLVGGTDGIMIGNLIKSQFLDSRDWPFGSALSIALTGC ILLLVALGMGAARARKGGAHA" misc_feature 4042175..4043059 /gene="potB" /locus_tag="PA3608" /note="ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]; Region: PotB; COG1176" /db_xref="CDD:440789" gene 4043061..4043831 /gene="potC" /locus_tag="PA3609" /db_xref="GeneID:880131" CDS 4043061..4043831 /gene="potC" /locus_tag="PA3609" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="polyamine ABC transporter permease PotC" /protein_id="NP_252299.1" /db_xref="GeneID:880131" /translation="MRRPYLLWSATALVYLFLYVPLVIVVLYSFNDSRLNAEWVGFTL DWYRKLFGNRDMLQAAANSLVIALVSASVATLLGTLAGVALHRFKLRVLPLLVLTPIA IPELLMGVSLVIFFIGLNMSLGMLSVTLAHITFSVGFVALVVQARMSGMDESLTEAAR DLGATPWQSFHLVTLPLIMPGIVAGALMAFTLSIDDFVITFFTAGGGFATLPTQIYTM IKIAVTPEVNAVSTLLMLLTLVLIVIASKLSPSAIKGH" misc_feature 4043061..4043828 /gene="potC" /locus_tag="PA3609" /note="ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]; Region: PotC; COG1177" /db_xref="CDD:440790" gene 4043920..4044984 /gene="potD" /locus_tag="PA3610" /db_xref="GeneID:880132" CDS 4043920..4044984 /gene="potD" /locus_tag="PA3610" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="polyamine ABC transporter substrate-binding protein PotD" /protein_id="NP_252300.1" /db_xref="GeneID:880132" /translation="MMKKLLLVATLMAGAAQATAAEKLYLFNWNDYIAEDTLKRFEQQ CGCELVQEFYSGTEEMMAKLAAGASGYDVIIPTQNAVEALIRKGDLLELDKSRLANLS NEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPADWSVIFDPAVLEKIK GRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKEL TLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGSKNPDL AYRFIDFMLDGRNASELTNQIGTGTPNAAALPFIKPEIKTLAALFPDATTQARLEPLK DLNSRQRRALNKLWTEIKLR" misc_feature 4043989..4044963 /gene="potD" /locus_tag="PA3610" /note="The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold; Region: PBP2_PotD_PotF_like; cd13590" /db_xref="CDD:270308" misc_feature order(4044004..4044006,4044604..4044606,4044613..4044615, 4044700..4044702,4044706..4044708,4044814..4044816) /gene="potD" /locus_tag="PA3610" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270308" gene 4045160..4045570 /locus_tag="PA3611" /db_xref="GeneID:880231" CDS 4045160..4045570 /locus_tag="PA3611" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252301.1" /db_xref="GeneID:880231" /translation="MSRFMALALCFVLPTAAHAASLKDFELSKMLEKVAKESSVGTPR AINEDILDQGYTVEGNQLINHLSVRASHAERMRSNPDSVRSQLGDSVCSNTGYRQLLA RGAILTYSFTEYKTNQPVATERFDAGSCRIQGKK" misc_feature 4045217..4045552 /locus_tag="PA3611" /note="Putative quorum-sensing-regulated virulence factor; Region: QSregVF; pfam13652" /db_xref="CDD:433379" gene 4045589..4045810 /locus_tag="PA3612" /db_xref="GeneID:880232" CDS 4045589..4045810 /locus_tag="PA3612" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252302.1" /db_xref="GeneID:880232" /translation="MLDKQHLLKIARTPMPFGKYQGRMLVDLPEEYLLWFYKKGFPPG ELGRLMQLTLELKIDGLDGLLKPLRPPAP" misc_feature 4045589..4045804 /locus_tag="PA3612" /note="Uncharacterized conserved protein, DUF3820 family [Function unknown]; Region: COG3530" /db_xref="CDD:442752" gene complement(4045934..4048339) /locus_tag="PA3613" /db_xref="GeneID:880122" CDS complement(4045934..4048339) /locus_tag="PA3613" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252303.1" /db_xref="GeneID:880122" /translation="MSQILPSQDELLAHAAAEPAFAAWLQGHGPLQHSAETRAAVFRT AHQLVQAGLQPDLASVYQLFRALDRLTASALRIVVHMTYARRIRLDGQPLQAEDFKTQ PEGHTGGALNMVPAYAGYLALNVLTGKTRAWLMGQGHCVAAIDALNVLTGNLHPEQER AYADGEEGLNRLLQDFYGYAQAPNGAPAAPLGSHVNPHTAGGIAEGGYLGFAELQYAH MPLPGETLVAFLSDGAAEEQRGSDWIPRWWRAEDCGAALPVMIANGRRIEQRTELGTH EGLEGFKLHLRRCGFDPISFDGRDPAAFVCTLWEMEQRLERRVQEKNSGILRYPLPIP YGIAETVKGFGFYGAGSNAAHNLPLPGNPHNDEQARQLFNQHANELWVEPEALELARR LFAEQRGERPLERDNPLALRHPIEPIIPPLRYRDDACSPMAALDRFYTELVEANPDLR ARVGNPDELASNRLGGVLKALKHRVSEPESELESVSGRVITALNEEAVVSACLANQGG LNLVASYEAFCVKMLGAVRQTLIFARQQKEVGRPAGWLGWPLVATSHTWENGKNQQSH QDTTFCEALLGEMSDMVRVLFPADHNSALALLPTIYRSRGQLACLVIPKRDRPMVFDA VQAERLARDGAILVEERCGSDPLLLIANGSYQLEQMRRAAQRLAEAGQAYRLVYLQEP GRFRAPRDRWEVEAVADEALVERLFPDSHERRVLLTHMRAEVARGHLWPILPDARRTS VLGYRNRGGTLDEAGMQFANRACWGNVLAACARLMEVPRTALLTPEEAAAVAGKGDPA LLR" misc_feature complement(<4046435..4048066) /locus_tag="PA3613" /note="phosphoketolase; Region: PRK05261" /db_xref="CDD:235379" misc_feature complement(4046528..4047040) /locus_tag="PA3613" /note="D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; Region: XFP; pfam03894" /db_xref="CDD:427575" gene 4048519..4049922 /locus_tag="PA3614" /db_xref="GeneID:880123" CDS 4048519..4049922 /locus_tag="PA3614" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252304.1" /db_xref="GeneID:880123" /translation="MASLTFLGAAQEVTGSCYLLETLDGVKVLLECGMRQGRREADNG NRAPFPFDPASIDAVVISHAHLDHSGLLPRLAAEGFKGPIFATEATCELLELMLLDSA HIQEKDAEWENRWRNRIGKPSIKPLYTQADTERALKLRRPISLGSTVAVARGVRVTFH NAGHILGSSIVEVQFHDQVQPRRLVFSGDLGNTCSPLMRAPSPLSRADVVMLESTYGD RDHRDSNDTLEELAAILDQAHRDGGNVLIPSFAVGRTQDLLYYLGRFYQEGRLPQQAV FLDSPMAARANGIYLRHSNEFDDRDREYIRGTGTTRLEEWLPVLRVTRSADESMAINR IKSGAVIIAGSGMCTGGRIVHHFKHNLWRPECHVVFPGFQARGTLGRNIVDGASAVRV FHQRIAVKAQIHTLGGFSAHAGQSQLLDWVGHFAHRPALYLIHGEREKMEALQSAIRE RLDWDAEIPEPGERIEI" misc_feature 4048528..4049919 /locus_tag="PA3614" /note="Predicted metal-dependent RNase, contains metallo-beta-lactamase and KH domains [General function prediction only]; Region: COG1782" /db_xref="CDD:441388" gene 4050005..4051075 /locus_tag="PA3615" /db_xref="GeneID:880243" CDS 4050005..4051075 /locus_tag="PA3615" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252305.1" /db_xref="GeneID:880243" /translation="MPYEADDYLSRHFQTSGTDLARKVDELAALAAPGDSPNLALYRE MLFTVTRMAQADRNRWDAKIMLQTLREMEHAFSVLEQFKRRRKVTVFGSARTPVEHPV YALARKLGEELARYDLMVITGAGGGIMAAAHEGAGLENSLGFNITLPFEQHANHTVDG SGNLLSFHFFFLRKLFFVKEADALVLCPGGFGTLDEALEVLTLVQTGKSPLVPIVLLD QPGGRYWEHALEFMQEQLLENHYILPADMRLMRLVHSAEDAVKEIAQFYRNFHSSRWL KGTFVIRLNHALNEAALAHLHEHFASLCLSGGFQQQAYSEQEQDEPEFRNLTRLAFVF NGRDQGRLRELLDYINLPENWD" misc_feature 4050263..4050802 /locus_tag="PA3615" /note="Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family [Nucleotide transport and metabolism]; Region: PpnN; COG1611" /db_xref="CDD:441219" gene complement(4051097..4051558) /locus_tag="PA3616" /db_xref="GeneID:880244" CDS complement(4051097..4051558) /locus_tag="PA3616" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="recombination regulator RecX" /protein_id="NP_252306.1" /db_xref="GeneID:880244" /translation="MAIVLDTPVAVRRAAMDLLARREHGRAELSRKLRQRGASAELID PALDRLAEEGLLDESRYLESFIASRARSGHGPLRIREELAQRGLPRADIERALGACEV DWSAQLREVWRRKFARLPQDAREKAQQGRFLAYRGYSMESISRLLNGRSDD" misc_feature complement(4051100..4051558) /locus_tag="PA3616" /note="recombination regulator RecX; Reviewed; Region: recX; PRK00117" /db_xref="CDD:234646" gene complement(4051564..4052604) /gene="recA" /locus_tag="PA3617" /db_xref="GeneID:880173" CDS complement(4051564..4052604) /gene="recA" /locus_tag="PA3617" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="recombinase A" /protein_id="NP_252307.1" /db_xref="GeneID:880173" /translation="MDENKKRALAAALGQIERQFGKGAVMRMGDHERQAIPAISTGSL GLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIAEAQKQGATCAFVDAEHALDPDY AGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD AHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGNPETTTGGNALKFYA SVRLDIRRTGAVKEGDEVVGSETRVKVVKNKVSPPFRQAEFQILYGKGIYRTGEIIDL GVQLGLVEKSGAWYSYQGSKIGQGKANAAKYLEDNPEIGSVLEKTIRDQLLAKSGPVK ADAEEVADAEAD" misc_feature complement(4051567..4052604) /gene="recA" /locus_tag="PA3617" /note="recombinase A; Provisional; Region: recA; PRK09354" /db_xref="CDD:236476" gene complement(4052738..4053244) /locus_tag="PA3618" /db_xref="GeneID:880187" CDS complement(4052738..4053244) /locus_tag="PA3618" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252308.1" /db_xref="GeneID:880187" /translation="MTLMESDLTALAARLGESLRYLGEQVSTAESCTGGGIAEAITRI PGSSGWFEAGYVTYSNRQKTLQLEVPESLFPAVGAVSREVVEAMVRGAQRHSGARFAV AVSGVAGPDGGSPEKPVGTVWLAWADGERLVSERCQFNGDRDAVRRQTVATALTGLLR MSNGENPG" misc_feature complement(4052762..4053223) /locus_tag="PA3618" /note="Nicotinamide mononucleotide (NMN) deamidase PncC [Coenzyme transport and metabolism]; Region: PncC; COG1546" /db_xref="CDD:441155" gene 4053392..4054399 /locus_tag="PA3619" /db_xref="GeneID:880188" CDS 4053392..4054399 /locus_tag="PA3619" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252309.1" /db_xref="GeneID:880188" /translation="MNIAPLKVSLLSLALLLSPVASLPAHAACTANLALQPASSLPAL GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIEDPMNAHFSPDGRYLTFMG RQNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLVFN GDGSVGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYATGAGDSLRVVRRNLENGQVCA LATPAAGGRDYYPVVRDYTAYFLSRTQPAGNDQLAMVVPNSPPGTPAILPLNHCQGDN SDAAPVNEDYLIFSSTSFDPTYSLLLGDIAAARVWRLDPAQINLPDGRQKLGASYTAA R" misc_feature 4053548..4054036 /locus_tag="PA3619" /note="Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport]; Region: TolB; COG0823" /db_xref="CDD:440585" gene 4054525..4057092 /gene="mutS" /locus_tag="PA3620" /db_xref="GeneID:880229" CDS 4054525..4057092 /gene="mutS" /locus_tag="PA3620" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA mismatch repair protein MutS" /protein_id="NP_252310.1" /db_xref="GeneID:880229" /translation="MTDLSQHTPMMQQYFKLKHQHPDQLMFYRMGDFYELFYEDAKKA AKLLDITLTARGQSGGKAIPMAGIPFHSAEGYLAKLVKLGESVAICEQIGDPATSKGP VERQVVRIITPGTVSDEALLDERRDNLLAAILGDERLFGLAVLDITSGRFSVQEIKGW ETLLAELERLNPAELLIPDDWPQGLPAEKRRGVRRRAPWDFDRDSAHKSLCQQFGTQD LKGFGCQNLTLAIGAAGCLLAYAKETQRTALPHLRSLRHDRLDDTVILDGASRRNLEL DINLSGGRENTLQSVVDRCQTAMASRLMSRWLNRPLRDRAVLEARQESIACLLERYRF ENLQPQLKEIGDLERILARIGLRNARPRDLARLRDALAALPDLQNAMTELEAPHLQAL ATTIGTYPELAELLAKAIIDNPPAVIRDGGVIKTGYDAELDELQALSENAGQFLMDLE AREKARTGLPNLKVGYNRIHGYFIELPRVQAEQAPADYIRRQTLKGAERFITPELKAF EDKALSAQSRALAREKALYEELLERLIGHLAPLQDSASALAELDVLANLAERALNLDL NRPRFVEHTCLHIEQGRHPVVEQVLETPFVANDLALDADTRMLVITGPNMGGKSTYMR QTALIVLLAHIGSFVPAARCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHN ATDKSLVLMDEVGRGTSTFDGLSLAWAAAEDLARTRAFTLFATHYFELTVLPESQPAV ANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPAPVIQRAREHLKRLETTS LPHEMPSQQSGKPASPMQSDLFASLPHPVIDELSRINPDDISPRQALDLLYAWKMRV" misc_feature 4054525..4057080 /gene="mutS" /locus_tag="PA3620" /note="DNA mismatch repair ATPase MutS [Replication, recombination and repair]; Region: MutS; COG0249" /db_xref="CDD:440019" protein_bind 4054663..4054675 /gene="mutS" /locus_tag="PA3620" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4057159..4057482 /gene="fdxA" /locus_tag="PA3621" /db_xref="GeneID:880230" CDS 4057159..4057482 /gene="fdxA" /locus_tag="PA3621" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ferredoxin I" /protein_id="NP_252311.1" /db_xref="GeneID:880230" /translation="MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCA LCEPECPAQAIFSEDEVPENMQEFIELNSELAEVWPNITEKKDALPDAEEWDGVAGKL QHLER" misc_feature 4057159..4057347 /gene="fdxA" /locus_tag="PA3621" /note="NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit [Nucleotide transport and metabolism]; Region: PreA; COG1146" /db_xref="CDD:440761" misc_feature 4057354..4057479 /gene="fdxA" /locus_tag="PA3621" /note="Domain of unknown function (DUF3470); Region: DUF3470; pfam11953" /db_xref="CDD:463410" gene complement(4057543..4057658) /gene="rsmZ" /locus_tag="PA3621.1" /db_xref="GeneID:4179184" ncRNA complement(4057543..4057658) /ncRNA_class="other" /gene="rsmZ" /locus_tag="PA3621.1" /product="regulatory RNA RsmZ" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:4179184" protein_bind complement(4057693..4057706) /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" protein_bind 4057722..4057735 /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" protein_bind complement(4057753..4057766) /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" gene complement(4057909..4058913) /gene="rpoS" /locus_tag="PA3622" /db_xref="GeneID:880421" CDS complement(4057909..4058913) /gene="rpoS" /locus_tag="PA3622" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor RpoS" /protein_id="NP_252312.1" /db_xref="GeneID:880421" /translation="MALKKEGPEFDHDDEVLLLEPGIMLDESSADEQPSPRATPKATT SFSSKQHKHIDYTRALDATQLYLNEIGFSPLLTPEEEVHFARLAQKGDPAGRKRMIES NLRLVVKIARRYVNRGLSLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIE RAIMNQTRTIRLPIHVVKELNVYLRAARELTHKLDHEPSPEEIANLLEKPVAEVKRML GLNERVTSVDVSLGPDSDKTLLDTLTDDRPTDPCELLQDDDLSESIDQWLTELTDKQR EVVIRRFGLRGHESSTLEEVGQEIGLTRERVRQIQVEALKRLREILEKNGLSSDALFQ " misc_feature complement(4057915..4058913) /gene="rpoS" /locus_tag="PA3622" /note="RNA polymerase sigma factor RpoS; Validated; Region: PRK05657" /db_xref="CDD:235548" gene complement(4059018..4059911) /locus_tag="PA3623" /db_xref="GeneID:880422" CDS complement(4059018..4059911) /locus_tag="PA3623" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252313.1" /db_xref="GeneID:880422" /translation="MDKGEGLRLAATLRQWTRLYGGCHLLLGAVVCSLLAACSSSPPG GVKVVDRNGSAPAAARRTPVTSGQYIVRRGDTLYSIAFRFGWDWKALAARNGIAPPYT IQVGQAIQFGGRASTQPSVAKNTPVVAAPVATKPTPVPPAVSTSVPAKPAPAPASTTT PPSSGATPVVAGPAVGGWAWPASGTLIGRFASNGSLNKGIDIAGQLGQPVLAASGGTV VYAGSGLRGYGELVIIKHNETYVSAYGHNRRLLVREGQQVKVGQSIAEMGSTGTDRVK LHFEIRRQGKPVDPLQYLPRR" misc_feature complement(4059021..4059824) /locus_tag="PA3623" /note="murein hydrolase activator NlpD; Region: nlpD; PRK10871" /db_xref="CDD:236782" protein_bind complement(4059032..4059045) /locus_tag="PA3623" /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" gene complement(4059957..4060592) /gene="pcm" /locus_tag="PA3624" /db_xref="GeneID:880441" CDS complement(4059957..4060592) /gene="pcm" /locus_tag="PA3624" /EC_number="2.1.1.77" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="protein-L-isoaspartate O-methyltransferase" /protein_id="NP_252314.1" /db_xref="GeneID:880441" /translation="MTSQRTRERLIQRLYEEGLSNAHVLEVIRRTPRHLFVDEALSHR AYEDTALPIGHNQTISQPFMVARMTELLLAAGPLDKVMEIGTGSGYQTAVLAQLVERV FSVERIQALQDKAKERLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAATEVPQSL LDQLAPGGRLVIPVGGGEVQQLMLIVRTEDGFSRQVLDSVRFVPLLNGPIA" misc_feature complement(4059960..4060592) /gene="pcm" /locus_tag="PA3624" /note="protein-L-isoaspartate(D-aspartate) O-methyltransferase; Region: pcm; PRK00312" /db_xref="CDD:178974" misc_feature complement(order(4060143..4060145,4060188..4060190, 4060194..4060199,4060272..4060277,4060323..4060343)) /gene="pcm" /locus_tag="PA3624" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(4060625..4061374) /gene="surE" /locus_tag="PA3625" /db_xref="GeneID:880442" CDS complement(4060625..4061374) /gene="surE" /locus_tag="PA3625" /EC_number="3.1.3.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="5'-nucleotidase SurE" /protein_id="NP_252315.1" /db_xref="GeneID:880442" /translation="MRILIANDDGVTAPGIAALYDALADHADCVVIAPDQDKSGASSS LTLDRPLHPQRLDNGFISLNGTPTDCVHLGLNGLLEELPDMVVSGINLGANLGDDVLY SGTVAAAIEGRFLKGPAFAFSLVSRLTDNLPTAMHFARLLVSAHERLAVPPRTVLNVN IPNLPLDRVRGIQLTRLGHRARAAAPVKVVNPRGKEGYWIAAAGDAEDGGPGTDFHAV MQGYVSITPLQLDRTFHEAFGGLDEWLGGLT" misc_feature complement(4060637..4061374) /gene="surE" /locus_tag="PA3625" /note="5'(3')-nucleotidase/polyphosphatase; Provisional; Region: surE; PRK00346" /db_xref="CDD:234732" gene complement(4061362..4062429) /locus_tag="PA3626" /db_xref="GeneID:880483" CDS complement(4061362..4062429) /locus_tag="PA3626" /EC_number="5.4.99.-" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine synthase D" /protein_id="NP_252316.1" /db_xref="GeneID:880483" /translation="MSVLGELDLLGPRAHGAACGEAVLKAVAEDFQVDEVLEIPLSGE GEHLWLWVEKRGLNTEEAARRLGRAAGVQQKNVSYAGLKDRQALTRQWFSLHLPGKAD PDLGAAEGADLRILRCTRHSRKLQRGAHAANGFTLRLTGLRAERAPLDARLERIAADG VPNYFGLQRFGHGGGNLVDARSCAEQDLLPANRNLRSRFLSAGRSYLFNRLLAERVAE GSWNRAAVGDLLAFTDSRSFFLAGEEECRDARLAALDLHPTGPLWGEGDPPSGAGVLD RELALAGREPALCRWLAKAGMAHERRILRLPIQGLAWHYPEPDVLQLEFVLPAGCFAT VVVREILDLVPTGQTENPCAY" misc_feature complement(4061395..4062405) /locus_tag="PA3626" /note="tRNA pseudouridine synthase D; Reviewed; Region: truD; PRK00984" /db_xref="CDD:234884" misc_feature complement(4062319..4062339) /locus_tag="PA3626" /note="Permutation of conserved domain. [active]" /db_xref="CDD:211340" misc_feature complement(4062178..4062189) /locus_tag="PA3626" /note="active site" /db_xref="CDD:211340" gene complement(4062426..4062899) /gene="ygbB" /locus_tag="PA3627" /db_xref="GeneID:880484" CDS complement(4062426..4062899) /gene="ygbB" /locus_tag="PA3627" /EC_number="4.6.1.12" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase" /protein_id="NP_252317.1" /db_xref="GeneID:880484" /translation="MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHAL SDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQA PKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR" misc_feature complement(4062438..4062899) /gene="ygbB" /locus_tag="PA3627" /note="YgbB family; Region: YgbB; pfam02542" /db_xref="CDD:460584" gene complement(4062970..4063821) /locus_tag="PA3628" /db_xref="GeneID:880458" CDS complement(4062970..4063821) /locus_tag="PA3628" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="esterase" /protein_id="NP_252318.1" /db_xref="GeneID:880458" /translation="MKDSLELIGSQKTFGGWHQRYRHFSRTLNCEMVFAIYLPPQAEP EAALPALYWLSGLTCTDENFMQKAGAQRVAAELGLVLVAPDTSPRGSGVPGDPDGAWD FGLGAGFYLNATQEPWAAHYRMHDYVVHELPALIEAHFPVSRRRGISGHSMGGHGALV CALRNPGRYLSLSAFAPICHPSDCPWGQKAFSRYLGEDPAAWREWDACALLEGASERL PILVDQGERDDFLAVQLKPEALRNAADKAGHPLELRLQPGYDHSYYFIASFIEDHLRH HAGVLNG" misc_feature complement(4062976..4063821) /locus_tag="PA3628" /note="A functionally diverse superfamily containing proteases, lipases, peroxidases, esterases, epoxide hydrolases and dehalogenases. The catalytic apparatus typically involves three residues (catalytic triad): a serine, a glutamate or aspartate and a...; Region: alpha/beta hydrolases; cl21494" /db_xref="CDD:473884" gene complement(4063875..4064987) /gene="adhC" /locus_tag="PA3629" /db_xref="GeneID:880459" CDS complement(4063875..4064987) /gene="adhC" /locus_tag="PA3629" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase" /protein_id="NP_252319.1" /db_xref="GeneID:880459" /translation="MIKSRAAVAFAPNKPLEIVEVDVAPPQKGEVLVRIVATGVCHTD AYTLSGQDSEGVFPCILGHEGGGIVEAVGEGVTSLQVGDHVIPLYTAECGKCKFCLSG KTNLCQAVRATQGKGLMPDGTSRFSYKGEPVFHYMGCSTFSEYTVLPEISLAKIPKDA PLEKVCLLGCGVTTGIGAVLNTAKVEEGATVAIFGLGGIGLAAIIGAKMAKAARIIAV DINPGKFDIARELGATDFINPKDYDKPIQDVIVELTDGGVDYSFECVGNVQLMRAALE CCHKGWGESVIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVRGRSELPSYVEKAQKG EIPLDTFITHTMGLEDINEAFELMHEGKSIRTVIHY" misc_feature complement(4063881..4064984) /gene="adhC" /locus_tag="PA3629" /note="class III alcohol dehydrogenases; Region: alcohol_DH_class_III; cd08300" /db_xref="CDD:176260" misc_feature complement(order(4064046..4064048,4064118..4064120, 4064478..4064480,4064718..4064723,4064799..4064801, 4064826..4064834,4064859..4064861,4064865..4064867)) /gene="adhC" /locus_tag="PA3629" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:176260" misc_feature complement(order(4064478..4064480,4064796..4064801, 4064865..4064867)) /gene="adhC" /locus_tag="PA3629" /note="catalytic Zn binding site [ion binding]; other site" /db_xref="CDD:176260" misc_feature complement(order(4063893..4063895,4064043..4064051, 4064121..4064126,4064178..4064183,4064193..4064198, 4064316..4064318,4064328..4064333,4064391..4064405, 4064466..4064468,4064478..4064480,4064859..4064864)) /gene="adhC" /locus_tag="PA3629" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:176260" misc_feature complement(order(4064667..4064669,4064691..4064693, 4064700..4064702,4064709..4064711)) /gene="adhC" /locus_tag="PA3629" /note="structural Zn binding site [ion binding]; other site" /db_xref="CDD:176260" misc_feature complement(order(4064046..4064063,4064070..4064078, 4064085..4064108,4064115..4064117,4064142..4064153, 4064172..4064177,4064208..4064210,4064223..4064225, 4064664..4064666,4064670..4064672,4064676..4064681, 4064685..4064687,4064694..4064699)) /gene="adhC" /locus_tag="PA3629" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:176260" gene 4065119..4066027 /gene="gfnR" /locus_tag="PA3630" /db_xref="GeneID:880466" CDS 4065119..4066027 /gene="gfnR" /locus_tag="PA3630" /experiment="EXISTENCE:[26503852]" /codon_start=1 /transl_table=11 /product="glutathione-dependent formaldehyde neutralization regulator GfnR" /protein_id="NP_252320.1" /db_xref="GeneID:880466" /translation="MNRWEGLDEFVAVAETGQFTAAAERMGVSSSHISRQVARLEERL QTRLLYRSTRRVSLSEAGQTFLQHCQRLQDARDEALRAVSDLSAEPKGLLRMTCAVAY GERFIVPLVNAFMADYPQLRVDIELSNRQLDLLHEGFDLAIRLGRLSDSRLVATRLAP RVMYLCATPEYLRRHGTPQSPAELGQFNCLIGSSDLWSFLEDGRETQHRVQGNWRCNS GQAVLDAALRGFGLCQLPDYYVIEHLRSGRLASLLEGHQPPNTAVWALYPQQRHLSPK VRQLVDYLKEGLAQSHPGLAGEKNLR" misc_feature 4065146..4065307 /gene="gfnR" /locus_tag="PA3630" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 4065392..4065982 /gene="gfnR" /locus_tag="PA3630" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like_1; cd08470" /db_xref="CDD:176159" misc_feature order(4065422..4065424,4065434..4065436,4065551..4065553, 4065593..4065595,4065599..4065601,4065773..4065775, 4065824..4065826,4065905..4065907) /gene="gfnR" /locus_tag="PA3630" /note="putative effector binding pocket [active]" /db_xref="CDD:176159" misc_feature order(4065425..4065430,4065440..4065445,4065449..4065454, 4065461..4065463,4065473..4065475,4065479..4065499, 4065680..4065682,4065755..4065769,4065788..4065793, 4065800..4065802) /gene="gfnR" /locus_tag="PA3630" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176159" gene 4066103..4067329 /locus_tag="PA3631" /db_xref="GeneID:880467" CDS 4066103..4067329 /locus_tag="PA3631" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252321.1" /db_xref="GeneID:880467" /translation="MSAFNAFRQRYLVRFWSPLPALVALGVASAYYFALTGTFWAVTG EFTRWGGHVLSWFGYQPQDWSYFRLIGLQGTPLDRIDGVMIIGMFLGALCCALWAGNV SLRWPTSKRRLLQGLVGGIVAGFGARLAMGCNLAAFFTGIPMFSLHAWAFMFATVGGA WIGVKISLLPFLRTPLKVGATASALPSAESLARRARLQARLGLAVLALAALFAAWRFE VSLVLGMACLFGLLFGGLIERAQICFTSAARDLWTTGRTRAAFGILLGMAAACIGTFA AIRLGVAPKIFWMGPNAIIGGILFGIGIVLAGGCETGWMYRSMEGQVHFWVVGIGNVI GGTLVAIFWDQLGTRLALPYPKLNLLESFGPGNGLLLTFAGLALCLLLVQLNASRFTR PRKPNHEPDRQTDPVA" misc_feature 4066130..4067284 /locus_tag="PA3631" /note="selenium metabolism membrane protein YedE/FdhT; Region: selen_YedE_FdhT; NF033796" /db_xref="CDD:468187" gene 4067295..4067543 /locus_tag="PA3632" /db_xref="GeneID:880460" CDS 4067295..4067543 /locus_tag="PA3632" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252322.1" /db_xref="GeneID:880460" /translation="MSQTDKPTLSLDLRGEHCPYNAIATLETLATMQPGERLEVVTDC SQSVHGIPEDTQRQGYKCLAVEQHGALFRFLIEVPLES" misc_feature 4067295..4067528 /locus_tag="PA3632" /note="putative sulfurtransferase YedF; Region: PRK11018" /db_xref="CDD:236822" misc_feature order(4067325..4067330,4067337..4067339,4067346..4067357, 4067361..4067363) /locus_tag="PA3632" /note="CPxP motif; other site" /db_xref="CDD:238180" gene complement(4067604..4068308) /gene="ygbP" /locus_tag="PA3633" /db_xref="GeneID:880461" CDS complement(4067604..4068308) /gene="ygbP" /locus_tag="PA3633" /EC_number="2.7.7.60" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" /protein_id="NP_252323.1" /db_xref="GeneID:880461" /translation="MTTSDLPAFWTVIPAAGVGSRMRADRPKQYLDLAGRTVIERTLD CFLEHPMLRGLVVCLAEDDPYWPGLDCAASRHVQRAAGGAERAGSVLNGLLRLLELGA QADDWVLVHDAARPNLTRGDLDRLLEELAEDPVGGLLAVPARDTLKRSDRDGRVSETI DRSVVWLAYTPQMFRLGALHRALADALVAGVAITDEASAMEWAGYAPKLVEGRADNLK ITTPEDLLRLQRSFPH" misc_feature complement(4067631..4068290) /gene="ygbP" /locus_tag="PA3633" /note="D-ribitol-5-phosphate cytidylyltransferase; Region: ispD; PRK00155" /db_xref="CDD:234670" misc_feature complement(order(4067655..4067657,4067967..4067975, 4068042..4068044,4068051..4068062,4068225..4068227, 4068246..4068263,4068267..4068269)) /gene="ygbP" /locus_tag="PA3633" /note="substrate binding site [active]" /db_xref="CDD:133009" misc_feature complement(order(4067667..4067672,4067682..4067693, 4067706..4067708,4067715..4067720,4067724..4067729, 4067805..4067822,4067874..4067876,4067880..4067882, 4067904..4067906,4067964..4067966)) /gene="ygbP" /locus_tag="PA3633" /note="dimer interface [active]" /db_xref="CDD:133009" gene complement(4068328..4068612) /locus_tag="PA3634" /db_xref="GeneID:880452" CDS complement(4068328..4068612) /locus_tag="PA3634" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="cell division protein FtsB" /protein_id="NP_252324.1" /db_xref="GeneID:880452" /translation="MRLRSPYWLFVVLILALAGLQYRLWVGDGSLAQVRDLQKQIADQ HGENERLLERNRILEAEVAELKKGTETVEERARHELGMVKDGETLYQLAK" misc_feature complement(4068331..4068591) /locus_tag="PA3634" /note="Septum formation initiator; Region: DivIC; cl11433" /db_xref="CDD:448252" gene complement(4068677..4069966) /gene="eno" /locus_tag="PA3635" /db_xref="GeneID:880453" CDS complement(4068677..4069966) /gene="eno" /locus_tag="PA3635" /EC_number="4.2.1.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="enolase" /protein_id="NP_252325.1" /db_xref="GeneID:880453" /translation="MAKIVDIKGREVLDSRGNPTVEADVILDNGIVGSACAPSGASTG SREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDAADQKALDHAMIELDGTEN KAKLGANAILAVSLAAAKAAAQAKGVPLYAHIADLNGTPGQYSMPVPMMNIINGGEHA DNNVDIQEFMVQPVGAKNFAEALRMGAEIFHHLKAVLKARGLNTAVGDEGGFAPNLSS NEDALAAIAEAVEKAGYKLGDDVTLALDCASSEFFKDGKYDLEGEGKVFDAAGFADYL AGLTQRYPIISIEDGMDESDWAGWKGLTDKIGAKVQLVGDDLFVTNTKILKEGIEKGI GNSILIKFNQIGSLTETLEAIQMAKAAGYTAVISHRSGETEDSTIADLAVGTAAGQIK TGSLCRSDRVSKYNQLLRIEEQLGAKAPYRGRAEFRG" misc_feature complement(4068680..4069966) /gene="eno" /locus_tag="PA3635" /note="Enolase [Carbohydrate transport and metabolism]; Region: Eno; COG0148" /db_xref="CDD:439918" gene complement(4070012..4070857) /gene="kdsA" /locus_tag="PA3636" /db_xref="GeneID:880428" CDS complement(4070012..4070857) /gene="kdsA" /locus_tag="PA3636" /EC_number="2.5.1.55" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="2-dehydro-3-deoxyphosphooctonate aldolase" /protein_id="NP_252326.1" /db_xref="GeneID:880428" /translation="MAQKIVRVGDIQIGNDLPFVLFGGMNVLESRDLAMQVCEEYVRV TEKLGIPYVFKASFDKANRSSIHSFRGPGLEEGMKIFEEIKKTFKVPVITDVHEPFQA QPVAEVCDIIQLPAFLSRQTDLVVAMARTNAVINIKKAQFLAPQEMKHILTKCEEAGN DRLILCERGSSFGYNNLVVDMLGFGIMKQFEYPVFFDVTHALQMPGGRADSAGGRRAQ VTDLAKAGLSQKLAGLFLEAHPDPEHAKCDGPCALRLNKLEAFLSQLKQLDELIKSFP AIETA" misc_feature complement(4070042..4070833) /gene="kdsA" /locus_tag="PA3636" /note="2-dehydro-3-deoxyphosphooctonate aldolase; Provisional; Region: PRK05198" /db_xref="CDD:235363" gene complement(4070860..4072488) /gene="pyrG" /locus_tag="PA3637" /db_xref="GeneID:880546" CDS complement(4070860..4072488) /gene="pyrG" /locus_tag="PA3637" /EC_number="6.3.4.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="CTP synthetase" /protein_id="NP_252327.1" /db_xref="GeneID:880546" /translation="MTRYIFVTGGVVSSLGKGIASASLAAILEARGLKITMLKLDPYI NVDPGTMSPFQHGEVFVTQDGAETDLDLGHYERFVRTTMTQNNNFTTGRVYMDVLRKE RRGDYLGATVQVIPHITDEIKRRIIKGAGDADVALVEIGGTVGDIESQPFLEAIRQLR VEIGAKRAMLMHLTLVPYIATAGETKTKPTQHSVKELRSIGLQPDVLVCRSDHPIDVS SRRKIALFTNVEERAVIALEDVDTIYRIPSVLHAQGLDDIVVERFGLECGQADLSEWD RVVDAKLNPEREVTIAMVGKYMELLDAYKSLIEAMTHAGIQSRTKVNLRYIDSEDIEQ QGTSLLEGVDAILVPGGFGLRGVEGKISTVQYARENKIPYLGICLGMQVAVIEYARNV LGWSDANSTEFDKSSGHPVVGLITEWQDATGATEIRTEASDLGGTMRLGAQECQLQTG TLVHDCYAKDVIVERHRHRYEVNNNLLPQLEQAGLKISGRSGDGALVEVVEAPEHPWF VACQFHPEFTSTPRDGHPLFSGFVNAALKYSGKA" misc_feature complement(4070866..4072488) /gene="pyrG" /locus_tag="PA3637" /note="CTP synthetase; Validated; Region: pyrG; PRK05380" /db_xref="CDD:235437" gene complement(4072659..4073987) /locus_tag="PA3638" /db_xref="GeneID:880547" CDS complement(4072659..4073987) /locus_tag="PA3638" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="tRNA(Ile)-lysidine synthase" /protein_id="NP_252328.1" /db_xref="GeneID:880547" /translation="MPAVPLESRLLQALAPWREAGGWCVAFSGGLDSTVLLHLLAQLA RSEALPALSALHVHHGLQAAADGWPAHCQAVCRSLGIPLRVERVQVAVGGSIEQAARD ARYRAFQANLGEGQVLLTAQHLDDQAETLLFRLLRGAGLRGLAAMPASRPLGGGRLCR PLLGVSRAELEAYAQAHRLDWVEDPSNQDPRFSRNYLRREIMPRLASHWPQAVAGMAR CAAHLREAEDLLAELAAIDLRACRQPSELDWPDWLDLPRIALEPLRRLSAARQRNLLR AWLGQLTRLPDSDHWAGWESLRDAGDDADPIWRLESGELRRGAGRIWWLPADWRAAAG PFVWERPAHPLLLPGNGRLALLGEVPAGPLRVDYRRGGEVLALAGRGRRDLKRLLNEA GVPSFLRGRLPLLFRADELLAVANIPGLDSPREGGWRLSWSPPTNDPGLS" misc_feature complement(4072680..4073915) /locus_tag="PA3638" /note="Adenine nucleotide alpha hydrolase (AANH) superfamily; Region: AANH_superfamily; cl00292" /db_xref="CDD:469708" gene complement(4074057..4075007) /gene="accA" /locus_tag="PA3639" /db_xref="GeneID:880489" CDS complement(4074057..4075007) /gene="accA" /locus_tag="PA3639" /EC_number="6.4.1.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase carboxyltransferase subunit alpha" /protein_id="NP_252329.1" /db_xref="GeneID:880489" /translation="MNPNFLDFEQPIADLQAKIEELRLVGNDNALNISDEISRLQDKS KALTENIFGNLSSWQIAQLARHPKRPYTLDYIGYLFSDFEELHGDRHFADDPAIVGGV ARLDGSPVMVIGHQKGREVREKVRRNFGMPRPEGYRKACRLMEMAERFKMPILTFIDT PGAYPGIDAEERGQSEAIAWNLRVMARLKTPIIATVIGEGGSGGALAIGVCDQLNMLQ YSTYSVISPEGCASILWKTAEKAPEAAEAMGITAERLKGLGIVDKVIDEPLGGAHRDP ASMAESIRGELLAQLKMLQGLEMGELLERRYDRLMSYGAP" misc_feature complement(4074063..4074998) /gene="accA" /locus_tag="PA3639" /note="Acetyl-CoA carboxylase alpha subunit [Lipid transport and metabolism]; Region: AccA; COG0825" /db_xref="CDD:440587" gene complement(4075157..4078678) /gene="dnaE" /locus_tag="PA3640" /db_xref="GeneID:880490" CDS complement(4075157..4078678) /gene="dnaE" /locus_tag="PA3640" /EC_number="2.7.7.7" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit alpha" /protein_id="NP_252330.1" /db_xref="GeneID:880490" /translation="MTVSFVHLRLHTEFSLVDGLVRVKPLAKAVAGLGMPAVAVTDQS NMCSLVKFYKTAMGAGIKPICGADIWLASREEDGPLSRLSLLAMNAKGYRNLTELISR GWSEGQRNGEIIIERDWVKEAAEGLIALSAAKEGEIGHALLDGEEAKAEALLREWMEV FPERFYVEVQRTSRVNDEEHLHAAVALASRCNAPLVATNDVRFIKQEDFEAHETRVCI GEGRTLDDPRRPRTYSDQQYLKSPAEMAELFSDLPEALENTVEIAKRCNIEVQLGKYF LPDFPTPNGMGIDDYLRHASFEGLEERLEVLLPKDTPDYEAKRQVYVDRLNFELDIII QMGFPGYFLIVMDFIKWAKNNGVPVGPGRGSGAGSLVAYVLKITDLDPLAYDLLFERF LNPERISMPDFDVDFCMEGRDRVIDYVADAYGRNAVSQIITFGTMAAKAVVRDVARVQ GKSYGLADRLSKMIPFEVGMTLDKAYEQEEMLRDFLKSDEEAAEIWEMALKLEGITRG TGKHAGGVVIAPTKLTDFSPIACDEEGGGLVTQFDKDDVEAAGLVKFDFLGLRTLTII KWAMEIINREQAKKGLEPVNIDFIPLDDKPTYSLLQKAETTAVFQLESRGMKELIKKL KPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGRAELSYPHPDYQYAGLEPVLKPTY GIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPEEMAKQRGGFIEGCKNNGIDAD LAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHFPAPFMAAVLTADMQNTDKV VTLIEECRHMKLRIVAPDVNNSEFRFTVDDDGRIVYGLGAIKGVGEGPVEAITECRAE GGPFNTLFDFCDRVDLKRINKRTLEALIRAGALDRLGPHYHDELKAYQATVDLNRAVL LAAMEEAIQAAEQTARSHDSGHMDLFGGVFAEPEADVYANHRKVKELTLKERLKGEKD TLGLYLTGHPIDEYEGEVRRFARQRIVELKPARDTQTVAGLIVNLRVMKNKKGDKMGF VTLDDRSGRIEASLFSEAFAAAQSLLQTDALVVVEGEVSQDDFSGGLRLRAKRVMSLE EARTGLAESLRMKLHADLLKGDRLRWLGELFNRHRGSCPITLDYTSADAKALLQFGES WRVDPADDLIQALRDQFGRDNVFLNYR" misc_feature complement(4075187..4078669) /gene="dnaE" /locus_tag="PA3640" /note="DNA polymerase III subunit alpha; Validated; Region: dnaE; PRK05673" /db_xref="CDD:235554" gene complement(4078808..4080223) /locus_tag="PA3641" /db_xref="GeneID:880497" CDS complement(4078808..4080223) /locus_tag="PA3641" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_252331.1" /db_xref="GeneID:880497" /translation="MQEFATQVVDLLNGLIWGKILIWLLVGCGLYFTVRLGLIQFRHF GHTFSVLKGSRQSDDSGISSFQALCTSLAARVGTGNVAGVAVAITLGGPGAVFWMWAI ALVGMATGFVEATLAQLFKIRDDKGQFRGGPAYYMEKGLGARWMGILFSIFLIIAFGF VFNSVQANTITGAMQGAFGVPTWISGIAVVILTALIIFGGLRSIARFSELAVPFMAVA YLLLAVGIILFNLSELPGVLAMVVKSAFGWHEAAAGGIGAAILNGFKRGLFSNEAGMG SAPNAAASATPYPPHPASQGYVQMAGVFIDTLLICTASAAIILLAGPQEGEGIMLVQN ALTSQVGDWGRYFLAVIILFFAFTSIVANYFYAENCLVFLEHNHLAGLLIFRLIVLAM VMFGALASLPFVWNLADVSMGLMAITNLIAILLLSNLAIKLAKDYNAQRKAGKLPTFD ASQFPEVQQKLEPGIWDDRRA" misc_feature complement(4078892..4080217) /locus_tag="PA3641" /note="Na+/alanine symporter [Amino acid transport and metabolism]; Region: AlsT; COG1115" /db_xref="CDD:440732" protein_bind complement(4078954..4078966) /locus_tag="PA3641" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 4078971..4078983 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(4080440..4081045) /gene="rnhB" /locus_tag="PA3642" /db_xref="GeneID:880498" CDS complement(4080440..4081045) /gene="rnhB" /locus_tag="PA3642" /EC_number="3.1.26.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribonuclease HII" /protein_id="NP_252332.1" /db_xref="GeneID:880498" /translation="MQLGLDFNLVEDLVAGVDEVGRGPLCGPVVTAAVILDPSRPILG LNDSKKLSEARREALFEEIREKALAWCIARAEVEEIDRLNILHATMLAMQRAVEGLSV IPRLALIDGNRCPKLAVPCAPVVKGDSQVPAIAAASILAKVSRDREMVELDRVYPGYG MAGHKGYPTAVHLEALSRLGPTPIHRRSFAPVRELLDVSVQ" misc_feature complement(4080458..4081009) /gene="rnhB" /locus_tag="PA3642" /note="Ribonuclease HII [Replication, recombination and repair]; Region: RnhB; COG0164" /db_xref="CDD:439934" gene complement(4081045..4082181) /gene="lpxB" /locus_tag="PA3643" /db_xref="GeneID:880521" CDS complement(4081045..4082181) /gene="lpxB" /locus_tag="PA3643" /EC_number="2.4.1.182" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="lipid-A-disaccharide synthase" /protein_id="NP_252333.1" /db_xref="GeneID:880521" /translation="MADGLRVALVAGEASGDILGSGLMQALRARHPDIEFIGVGGPRM EAEGLSSYFPMERLSVMGLVEVLGRLPELLRRRKRLIRTLIEARPDVMIGIDAPDFTL GVEHKLRQAGLRTVHYVSPSVWAWRQKRVLKIREACDLMLALFPFEARFYEEHGVPVR FVGHPLANTIPLQADRAAARARLGLPADGQVLALMPGSRGGEVGKLGALFLDTAQRLL VERPGLRFVLPCASAARREQIEQMLQGREPLPLTLLDGASHEALAACDAVLIASGTAT LEALLYKRPMVVAYRVAGLTYRILKRLVKSPYISLPNLLAGRLLVPELIQDAATPQAL AATLSPLLDDGSQQVEFFDAIHRALRQDASAQAAEAVLQLVERR" misc_feature complement(4081048..4082169) /gene="lpxB" /locus_tag="PA3643" /note="Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]; Region: LpxB; COG0763" /db_xref="CDD:440526" gene complement(4082185..4082961) /gene="lpxA" /locus_tag="PA3644" /db_xref="GeneID:880493" CDS complement(4082185..4082961) /gene="lpxA" /locus_tag="PA3644" /EC_number="2.3.1.129" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase" /protein_id="NP_252334.1" /db_xref="GeneID:880493" /translation="MSLIDPRAIIDPSARLAADVQVGPWSIVGAEVEIGEGTVIGPHV VLKGPTKIGKHNRIYQFSSVGEDTPDLKYKGEPTRLVIGDHNVIREGVTIHRGTVQDR AETTIGDHNLIMAYAHIGHDSVIGNHCILVNNTALAGHVHVDDWAILSGYTLVHQYCR IGAHSFSGMGSAIGKDVPAYVTVFGNPAEARSMNFEGMRRRGFSSEAIHALRRAYKVV YRQGHTVEEALAELAESAAQFPEVAVFRDSIQSATRGITR" misc_feature complement(4082188..4082961) /gene="lpxA" /locus_tag="PA3644" /note="Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase [Cell wall/membrane/envelope biogenesis]; Region: LpxA; COG1043" /db_xref="CDD:440665" gene complement(4082958..4083398) /gene="fabZ" /locus_tag="PA3645" /db_xref="GeneID:880494" CDS complement(4082958..4083398) /gene="fabZ" /locus_tag="PA3645" /EC_number="4.2.1.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ" /protein_id="NP_252335.1" /db_xref="GeneID:880494" /translation="MMDINEIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVSINEP FFNGHFPEHPIMPGVLIIEAMAQAAGILGFKMLDVKPADGTLYYFVGSDKLRFRQPVL PGDQLQLHAKFISVKRSIWKFDCHATVDDKPVCSAEIICAERKL" misc_feature complement(4082964..4083398) /gene="fabZ" /locus_tag="PA3645" /note="3-hydroxyacyl-ACP dehydratase FabZ; Region: fabZ; PRK00006" /db_xref="CDD:234568" gene complement(4083444..4084505) /gene="lpxD" /locus_tag="PA3646" /db_xref="GeneID:880525" CDS complement(4083444..4084505) /gene="lpxD" /locus_tag="PA3646" /EC_number="2.3.1.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="UDP-3-O-acylglucosamine N-acyltransferase" /protein_id="NP_252336.1" /db_xref="GeneID:880525" /translation="MMSTLSYTLGQLAAHVGAEVRGDADLPIQGLATLQEAGPAQLSF LANPQYRKYLPESRAGAVLLTAADADGFAGTALVVANPYLAYASLSHLFDRKPKAAAG IHPTAIVAADAEVDPSASVGAYAVIESGARIGAGVSIGAHCVIGARSVIGEGGWLAPR VTLYHDVTIGARVSIQSGAVIGGEGFGFANEKGVWQKIAQIGGVTIGDDVEIGANTTI DRGALSDTLIGNGVKLDNQIMIAHNVQIGDHTAMAACVGISGSAKIGRHCMLAGGVGL VGHIEICDNVFVTGMTMVTRSITEPGSYSSGTAMQPAAEWKKSAARIRQLDDMARRLQ QLEKRLAAVTSSGDASSDA" misc_feature complement(4083483..4084490) /gene="lpxD" /locus_tag="PA3646" /note="UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional; Region: lpxD; PRK00892" /db_xref="CDD:234858" gene complement(4084505..4085011) /locus_tag="PA3647" /db_xref="GeneID:880526" CDS complement(4084505..4085011) /locus_tag="PA3647" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252337.1" /db_xref="GeneID:880526" /translation="MRKFTQFVLITAAIMAAPSAFAEMKIAVLNYQMALLESDAAKQY AVDAEKKFGPQLNKLKNLERDAKALQDKLVSNGSKMSQGDREKAELDFKQKARDFQFQ SKELNESKAAADRDMLKKLKPKLDQAVEETIKKGGYDMVIERGAVVDVKPQYDITRQV IERMNQLR" misc_feature complement(4084514..4085011) /locus_tag="PA3647" /note="Periplasmic chaperone for outer membrane proteins, Skp family [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: HlpA; COG2825" /db_xref="CDD:442073" gene complement(4085062..4087455) /gene="opr86" /locus_tag="PA3648" /db_xref="GeneID:880506" /db_xref="PseudoCap:PA3648" CDS complement(4085062..4087455) /gene="opr86" /locus_tag="PA3648" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="outer membrane protein Opr86" /protein_id="NP_252338.1" /db_xref="GeneID:880506" /db_xref="PseudoCap:PA3648" /translation="MKRFLLPALLSALMIAEVHAESFTVSDIRVNGLQRVSAGSVFAA LPLNVGETIDDQALVQATRSLFKTGFFQDIQLGRDGNVLVVTVVERPSISSIEIEGNK AISKEDLLKGLKQSGLAEGEIFQRATLEGVRNELQRQYVAQGRYSAEINAEVIPQPRN RVALKININEGTVAAISHINVVGNTVFSEEDLTDLFELKTTNWLSFFKNDDKYAREKL SGDLERLRSYYLDRGYINMDIASTQVSITPDKKHVYITVNINEGEKYTIRDVKLTGDL KVPEEEVKRLLLVQKGQVFSRKVMTTTSDLITRRLGNEGYTFANVNGVPEAHDDDKTV SVTFVVDPGKRAYVNRINFRGNTKTEDEVLRREMRQMEGGWASTYLIDQSKARLERLG YFKEVNVETPAVPGTDDQVDVNYSVEEQPSGSITASVGFAQSAGLILGGSISQNNFLG TGNKVSIGLTRSEYQTRYNFGFVDPYWTVDGVSLGYNAFYRKTDYDELDVDVASYSVN SLGAGMSIGYPISETSRLTYGLSVQRDQIDTGRYTVDEIYDFLDKEGDNFTNFKASIG WSESTLNKGVLATRGHSQSLTLETTLPGSDLSFYKIDYRGQVFAPLTDNYTMRFHTEL GYGDGYGSTERLPFYENYYAGGFNSVRGFKDSTLGPRSTPSVARNPDGTPMKNQGPDS KGRYTDPDQDPEAFGGNILITGGAELLFPLPFVKDQRQLRTVLFWDVGSTFDTDCPTK TTTNCDGIKTDNLASSVGVGLTWITALGPLSFSLATPIKKPDNAETQVFQFSLGQTF" misc_feature complement(4085065..4087389) /gene="opr86" /locus_tag="PA3648" /note="outer membrane protein assembly complex, YaeT protein; Region: OM_YaeT; TIGR03303" /db_xref="CDD:274514" gene complement(4087526..4088878) /locus_tag="PA3649" /db_xref="GeneID:880507" CDS complement(4087526..4088878) /locus_tag="PA3649" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="zinc metalloprotease" /protein_id="NP_252339.1" /db_xref="GeneID:880507" /translation="MSALYMIVGTLVALGVLVTFHEFGHFWVARRCGVKVLRFSVGFG TPLVRWHDRHGTEFVVAAIPLGGYVKMLDEREAEVPAHLLEQSFNRKTVRQRIAIVAA GPIANFLLAILFFWVVALLGSQQVRPVIGSVAPESLAAQAGLEAGQELLAVDGEPVTG WNGVNLQLVRRLGESGTLEVRVQEKGSNVDSTHQVRLDGWLKGEDNPDPIASLGIRPW RPALPPVLAELDPKGPAQAAGLKLGDRLQSIDGIAVDDWQQVVDSVRARPGQRVQLKV LRDGEVLDVALELAVRGEGKARSGYMGAGVAGTEWPAEMLREVSYGPLEAVGQALSRT WTMSLLTLDSIKKMLLGELSVKNLSGPITIAKVAGASAQSGVGDFLNFLAYLSISLGV LNLLPIPVLDGGHLLFYLVEWVRGRPLSERVQAWGMQIGISLVVGVMLLALVNDLSRL " misc_feature complement(4087529..4088878) /locus_tag="PA3649" /note="sigma E protease regulator RseP; Region: PRK10779" /db_xref="CDD:182723" protein_bind complement(4087582..4087594) /locus_tag="PA3649" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3648" /bound_moiety="AmrZ" gene complement(4088904..4090094) /gene="dxr" /locus_tag="PA3650" /db_xref="GeneID:880464" CDS complement(4088904..4090094) /gene="dxr" /locus_tag="PA3650" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="1-deoxy-D-xylulose 5-phosphate reductoisomerase" /protein_id="NP_252340.1" /db_xref="GeneID:880464" /translation="MSRPQRISVLGATGSIGLSTLDVVQRHPDRYEAFALTGFSRLAE LEALCLRHRPVYAVVPEQAAAIALQGSLAAAGIRTRVLFGEQALCEVASAPEVDMVMA AIVGAAGLPSTLAAVEAGKRVLLANKEALVMSGALFMQAVKRSGAVLLPIDSEHNAIF QSLPRNYADGLERVGVRRILLTASGGPFRETPLEQLASVTPEQACAHPNWSMGRKISV DSASMMNKGLELIEACWLFDAQPSQVEVVIHPQSVIHSMVDYVDGSVIAQLGNPDMRT PISYAMAWPERIDSGVSPLDMFAVGRLDFQRPDEQRFPCLRLASQAAETGGSAPAMLN AANEVAVAAFLERHIRFSDIAVIIEDVLNREAVTAVESLDQVLAADRRARSVAGQWLT RHAG" misc_feature complement(4088910..4090085) /gene="dxr" /locus_tag="PA3650" /note="1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid transport and metabolism]; Region: Dxr; COG0743" /db_xref="CDD:440506" gene complement(4090091..4090906) /gene="cdsA" /locus_tag="PA3651" /db_xref="GeneID:880465" CDS complement(4090091..4090906) /gene="cdsA" /locus_tag="PA3651" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphatidate cytidylyltransferase" /protein_id="NP_252341.1" /db_xref="GeneID:880465" /translation="MLKQRIITALVLLPIALGGFFLLEGAFFALFIGAVVSLGAWEWA RLAGYEQQFGRVAYAATVAVLMVALYHLPQLAGAVLLLALVWWTLATVLVLTYPESVG YWGGRWRRLGMGLLILLPAWQGLVLLKQWPLANGLIIAVMVLVWGADIGAYFSGKAFG KRKLAPRVSPGKSWEGVYGGLAASLAITLAVGLYRGWSLGALLLALLGAALVVFVSIV GDLTESMFKRQSGIKDSSNLLPGHGGVLDRIDSLTAAIPVFAALLWAAGWGAP" misc_feature complement(4090118..4090906) /gene="cdsA" /locus_tag="PA3651" /note="Cytidylyltransferase family; Region: CTP_transf_1; cl21502" /db_xref="CDD:451277" gene complement(4090900..4091655) /gene="uppS" /locus_tag="PA3652" /db_xref="GeneID:880553" CDS complement(4090900..4091655) /gene="uppS" /locus_tag="PA3652" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ditrans,polycis-undecaprenyl-diphosphate synthase" /protein_id="NP_252342.1" /db_xref="GeneID:880553" /translation="MEKTRKDVCVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVR AVIEVCAEAGVEVLTLFAFSSENWQRPADEVSALMELFLVALRREVRKLDENGIRLRI IGDRTRFHPELQAAMREAEAATAGNTRFLLQVAANYGGQWDIVQAAQRLAREVQGGHL AADDISAELLQGCLVTGDQPLPDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFK HAAMRAALADFSKRQRRFGKTSEQVEAEARPSC" misc_feature complement(4090927..4091628) /gene="uppS" /locus_tag="PA3652" /note="Undecaprenyl pyrophosphate synthase [Lipid transport and metabolism]; Region: UppS; COG0020" /db_xref="CDD:439791" protein_bind complement(4091607..4091619) /gene="uppS" /locus_tag="PA3652" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(4091671..4092228) /gene="frr" /locus_tag="PA3653" /db_xref="GeneID:880554" CDS complement(4091671..4092228) /gene="frr" /locus_tag="PA3653" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="ribosome recycling factor" /protein_id="NP_252343.1" /db_xref="GeneID:880554" /translation="MINEIKKEAQERMGKTLEALGHAFAKIRTGRAHPSILDSVMVSY YGADTPLRQVANVTVEDSRTLALAVFDKSMIQAVEKAIMTSDLGLNPATAGTTIRVPM PALTEETRKGYTKQARAEAEQARVSVRNIRRDALAQLKDLQKEKEISEDEERRAGDDV QKLTDKFIGEIEKALEAKEADLMAV" misc_feature complement(4091674..4092228) /gene="frr" /locus_tag="PA3653" /note="Ribosome recycling factor [Translation, ribosomal structure and biogenesis]; Region: Frr; COG0233" /db_xref="CDD:440003" misc_feature complement(order(4091914..4091925,4092133..4092144)) /gene="frr" /locus_tag="PA3653" /note="hinge region; other site" /db_xref="CDD:238288" protein_bind 4091672..4091684 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(4092231..4092968) /gene="pyrH" /locus_tag="PA3654" /db_xref="GeneID:880536" CDS complement(4092231..4092968) /gene="pyrH" /locus_tag="PA3654" /EC_number="2.7.4.22" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="uridylate kinase" /protein_id="NP_252344.1" /db_xref="GeneID:880536" /translation="MAQQLSARQPRYKRILLKLSGEALMGSEEFGIDPKVLDRMALEI GQLVGIGVQVGLVIGGGNLFRGAALSAAGMDRVTGDHMGMLATVMNGLAMRDALERSN IPALVMSAISMVGVTDHYDRRKAMRHLGGGEVVIFSAGTGNPFFTTDSAACLRAIEID ADVVLKATKVDGVYTADPFKDPNAEKFERLTYDEVLDRKLGVMDLTAICLCRDQNMPL RVFNMNKPGALLNIVVGGAEGTLIEEG" misc_feature complement(4092237..4092944) /gene="pyrH" /locus_tag="PA3654" /note="Uridylate kinase [Nucleotide transport and metabolism]; Region: PyrH; COG0528" /db_xref="CDD:440294" gene complement(4093167..4094036) /gene="tsf" /locus_tag="PA3655" /db_xref="GeneID:880592" CDS complement(4093167..4094036) /gene="tsf" /locus_tag="PA3655" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="elongation factor Ts" /protein_id="NP_252345.1" /db_xref="GeneID:880592" /translation="MAEITAAMVKELRERTGLGMMECKKALTAAGGDIEKAIDDMRAA GAIKAAKKAGNIAAEGSIAVKIAADNKAAVIIEVNSQTDFLALQDDFKGFVAESLEKA FNEKLTDAAPLVEAREEARLALVAKTGENVNIRRLTRVEGDVVGAYLHGHRIGVVVNL KGGNPELAKDIAMHVAASNPQFLSASEVSEEAIAKEKEIFLALNADKIAGKPENIVEN MVKGRISKFLAEASLVEQPFVKNPEVKVGDLAKQAGAEIVSFVRYEVGEGIEKAEVDF AAEVAAQVAATKQ" misc_feature complement(4093209..4094033) /gene="tsf" /locus_tag="PA3655" /note="Translation elongation factor EF-Ts [Translation, ribosomal structure and biogenesis]; Region: Tsf; COG0264" /db_xref="CDD:440034" gene complement(4094167..4094907) /gene="rpsB" /locus_tag="PA3656" /db_xref="GeneID:880593" CDS complement(4094167..4094907) /gene="rpsB" /locus_tag="PA3656" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S2" /protein_id="NP_252346.1" /db_xref="GeneID:880593" /translation="MSQVNMRDMLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLE KTLPMFNEALTFVERLAAGKNKILFVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLT NYKTIRQSIKRLRDLETQSQDGTFDKLTKKEALMRSRDLEKLERSLGGIKDMGGLPDA LFVIDVDHERIAITEANKLGIPVIGVVDTNSSPEGVDYVIPGNDDAIRAVQLYLNSMA EAVIRGKQGAATSADEFVEEAPAESAEG" misc_feature complement(4094170..4094907) /gene="rpsB" /locus_tag="PA3656" /note="Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]; Region: RpsB; COG0052" /db_xref="CDD:439822" gene 4095172..4095957 /gene="map" /locus_tag="PA3657" /db_xref="GeneID:880564" CDS 4095172..4095957 /gene="map" /locus_tag="PA3657" /EC_number="3.4.11.18" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="methionine aminopeptidase" /protein_id="NP_252347.1" /db_xref="GeneID:880564" /translation="MTVTIKTPDDIEKMRIAGRLAAEVLEMIGEHIKPGVTTEELDRI CHDYIVNEQKAIPAPLNYKGFPKSICTSINHVVCHGIPNEKPLKEGDILNVDITVIKD GYHGDTSKMFLVGKTPEWADRLCQITQECMYKGISVVRPGAHLGDIGEIIQKHAEKNG FSVVREYCGHGIGKVFHEEPQVLHYGRAGTGIELKEGMIFTIEPMINQGRPETRLLGD GWTAITKDRKLSAQWEHTVLVTADGYEILTLRNDETFPRTSAA" misc_feature 4095178..4095930 /gene="map" /locus_tag="PA3657" /note="Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]; Region: Map; COG0024" /db_xref="CDD:439795" gene 4096124..4098826 /gene="glnD" /locus_tag="PA3658" /db_xref="GeneID:880565" CDS 4096124..4098826 /gene="glnD" /locus_tag="PA3658" /EC_number="2.7.7.59" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bifunctional uridylyltransferase/uridylyl-removing protein" /protein_id="NP_252348.1" /db_xref="GeneID:880565" /translation="MPQVDPELFDRGQFQAELALKSSPIAAFKKAIRQFREVLDNRFN SGRDIRRLIEDRAWCVDQILQQAWQRFDWGDDADIALVAVGGYGRGELHPYSDVDLLI LLDSEDQESFREPIEGFLTLLWDIGLEVGQSVRSVQQCAEEARADLTVITTLMECRTI CGPDSLRQRMLQVTGSAHMWPSKEFFLAKRHEQQRRHAKYNDTEYNLEPNVKGSPGGL RDIQTILWMARRQFGSLNLHALVREGFLVESECSMLASSQEFLWRVRYALHMLAGRAE DRLLFDHQRSIARLFGYEDNDVKLAVERFMQKYYRVVMAISELNDLIIQHFEEVILPC EQPVQIQPLNSRFQLRDGYIEVTHPNVFKRTPFALLEIFVLMAQHPEIKGVRADTIRL LRDSRHLIDDEFRHDIRNTSLFIELFKSSQGIHRNLRRMNRYGILGRYLPEFGHIIGQ MQHDLFHIYTVDAHTLNLIKHLRKLNRPEMAEKYPLASKIIDRLPKPELIYIAGLYHD IAKGRGGDHSELGAVDAEAFCQSHQLPLWDTQLVSWLVQNHLVMSTTAQRKDLSDPQV IFDFAQLVGDQTHLDYLYVLTVADINATNPTLWNSWRASLLRQLYTETKRALRRGLEN PVDREEQIRQTQTAALDQLVRNGIDQDDAEQLWSQLGDDYFLRHTAGDVAWHTEAILQ HPDDGTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITS TSQFTLDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHF AFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVED VFYITDARNQPLADPDLCKRLQAALVEQLSQDNGRDTLPTRINF" misc_feature 4096124..4098808 /gene="glnD" /locus_tag="PA3658" /note="PII uridylyl-transferase; Provisional; Region: glnD; PRK00275" /db_xref="CDD:234709" gene 4098844..4100052 /locus_tag="PA3659" /db_xref="GeneID:880570" CDS 4098844..4100052 /locus_tag="PA3659" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="succinyldiaminopimelate transaminase" /protein_id="NP_252349.1" /db_xref="GeneID:880570" /translation="MNTALDNLQPYPFEKLRALLGGARPPATLKPIALSIGEPKHRSP SFVAETLAENLDQLAVYPTTLGLPALREAIARWCERRFSVPAGWLDAARHVLPVNGTR EALFAFTQTVVRRSEPGEAPGLVVSPNPFYQIYEGAALLAGAVPHYLPCREENGFNPD FDAVDEATWQRCQILFLCSPGNPTGALVPLETLKKLIALADRYDFVIAADECYSELYF DENAPPPGLLNACAELGRTDFSRCVVFHSLSKRSNLPGLRSGFVAGDAEILKKFLLYR TYHGCAMPVQTQLASIAAWNDEVHVRANRSLYREKFDAVLAILDGVLDVQRPDGSFYL WARTPVDDTVFTRELFEQQHVTVVPGSYLSREVDGENPGANRVRMALVAPLAECVEAA ERIRDYLRAR" misc_feature 4098844..4100046 /locus_tag="PA3659" /note="succinyldiaminopimelate transaminase; Provisional; Region: PRK09147" /db_xref="CDD:236393" gene complement(4100104..4101849) /locus_tag="PA3660" /db_xref="GeneID:880571" CDS complement(4100104..4101849) /locus_tag="PA3660" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sodium/hydrogen antiporter" /protein_id="NP_252350.1" /db_xref="GeneID:880571" /translation="MSDSCLPIAMVQSAQSHRPGTKPEIPALMQTVYTVLTLLLVVGA TRLAAQLLPLPLPLIQIAAGALLALPSLGLHIALDPELFLFLFIPPLLFVDGWRIPKR EVWRMRWPILMMAFGLVFFTVVGAGYFIHLLIPEIPLAASFALAAVLSPTDALAVSAI TQGRLPKRLMHLLEGEALMNDASGLVAFKFAIAAAMTGVFSLVDASLNFLVVAVGGLA IGVFLSWSLGRIRAWMISRGWDDPATHVVLMLLLPFASYMVAEHLGVSGILSAVAAGM MQSWVDLLPRQTSTRLLNRSVWSMLEFAFNGVVFLLLGLQLPDIMKSVANHHGDLLWR SSLLLAYVAAITAVLMLIRYGWVYGYWKLSLRIDRWRGKSPPGLSGISLRRLSALSAL SGVRGAVTLAAVLSVPMSLMDGSAFPQRDLIIFIATSVILISLIGATIGLPLLLRGLP ASNNGAHERERREAWRKTAEAAIRALESEELPQVEGNDAANTSRVAEARAQIMAEYRQ SLDTAPTTDEARDQAQALEIADKALRLKALRAQRLELYRQRRNNEIDDETLGDILREL DQQESWLTNRFARWV" misc_feature complement(4100131..4101666) /locus_tag="PA3660" /note="Sodium/hydrogen exchanger family; Region: Na_H_Exchanger; cl01133" /db_xref="CDD:470090" gene 4102087..4102446 /locus_tag="PA3661" /db_xref="GeneID:880574" CDS 4102087..4102446 /locus_tag="PA3661" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252351.1" /db_xref="GeneID:880574" /translation="MTSKGLTSALLLASMFAATSGCLQQNALTQGYRTTQPGQPGQAQ VASANTPCTPSATNDLIATGRSLLDITTNLIKTRNQMSDGGSIMRDVDDVQKVGKGHA VLDSVESMTGGPQQPCG" gene 4102768..4103061 /locus_tag="PA3662" /db_xref="GeneID:880575" CDS 4102768..4103061 /locus_tag="PA3662" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252352.1" /db_xref="GeneID:880575" /translation="MRRAEMLLLKSLAETLMADRDNRHDDLQATMRLAHLSSPEMILY MVNRVLELEESIERIAAVLQKLSADEPMPLEETPPEPAFEPALQSRATETAET" gene complement(4103076..4103429) /locus_tag="PA3663" /db_xref="GeneID:880543" CDS complement(4103076..4103429) /locus_tag="PA3663" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252353.1" /db_xref="GeneID:880543" /translation="MSCIGRQIDQLRLQIPGFACKPGCHDCCGPVTASSEEMARLPVK SEAEHDAALAEWNCVHLGPNGCEAYEERPLICRLFGTTPNLPCPEGRGPEVPVAEQVE RQVHALIASTRQVLV" misc_feature complement(4103193..4103363) /locus_tag="PA3663" /note="Putative zinc- or iron-chelating domain; Region: CxxCxxCC; pfam03692" /db_xref="CDD:308985" gene 4103732..4104079 /locus_tag="PA3664" /db_xref="GeneID:880544" CDS 4103732..4104079 /locus_tag="PA3664" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252354.1" /db_xref="GeneID:880544" /translation="MTYVLYGIKACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLR RWCAEHGWQTVLNRAGTTFRKLDEAQKADLDEAKAIELMLAQPSMIKRPVLELGGRTL VGFKPDAYAAALA" misc_feature 4103741..4104052 /locus_tag="PA3664" /note="Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine...; Region: ArsC_Yffb; cd03035" /db_xref="CDD:239333" misc_feature order(4103762..4103764,4103900..4103902,4104005..4104007, 4104044..4104046) /locus_tag="PA3664" /note="putative catalytic residues [active]" /db_xref="CDD:239333" gene 4104092..4104715 /locus_tag="PA3665" /db_xref="GeneID:880583" CDS 4104092..4104715 /locus_tag="PA3665" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252355.1" /db_xref="GeneID:880583" /translation="MSVAWALFVPACFALNLAPGPNNLLSLNNAARHGFATASLAGGG RLLAFAGMLALAASGLALVLHTSAWLFLAIKLLGAAYLLWLAVQLWRTDAQPLANEAS PARPSLWRLGRQEFLVAAGNPKAILIFTAFLPQFVDPGQPLGAQFAQLGAAFLLLEWL AIALYSYAGLHLGRLLAGQRARRLFNRGCAALLGSAGLGLLLSRRPA" misc_feature 4104092..4104658 /locus_tag="PA3665" /note="Threonine/homoserine/homoserine lactone efflux protein [Amino acid transport and metabolism]; Region: RhtB; COG1280" /db_xref="CDD:440891" gene 4104745..4105779 /gene="dapD" /locus_tag="PA3666" /db_xref="GeneID:880584" CDS 4104745..4105779 /gene="dapD" /locus_tag="PA3666" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase" /protein_id="NP_252356.1" /db_xref="GeneID:880584" /translation="MSQSLFSLAFGVGTQNRQEAWLEVFYALPLLKPSSEIVAAVAPI LGYAAGNQALTFTSQQAYQLADALKGIDAAQSALLSRLAESQKPLVATLLAEDAAPSS TAEAYLKLHLLSHRLVKPHAVNLSGIFPLLPNVAWTNIGAVDLAELAELQLEARLKGK LLEVFSVDKFPKMTDYVVPAGVRIADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPG MIEGRVSAGVFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCLIGANAGIGIPLGDRN IVEAGLYITAGTKVALLDEQNALVKVVKARDLAGQPDLLFRRNSQNGAVECKTNKTAI ELNEALHAHN" misc_feature 4104757..4105776 /gene="dapD" /locus_tag="PA3666" /note="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Region: DapD_gpp; TIGR03536" /db_xref="CDD:211834" gene 4105874..4107079 /locus_tag="PA3667" /db_xref="GeneID:880538" CDS 4105874..4107079 /locus_tag="PA3667" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cysteine desulfurase" /protein_id="NP_252357.1" /db_xref="GeneID:880538" /translation="MSLPSPWRADFPAFSAFAAEGLTYLDSAATAQKPQAVLDALNGY YLGGAANVHRAQHVPGERATRAFEAARSRVAHWLHAGNPAEVLFTRGTTEAINLVAYG LERHFRPGDELLVSALEHHANLLPWQQLALRRGLVLRVLPLDERGVIDLEQARHIIGE RTRLLAISQLSNVLGTWQPVVELIQLARERGAWTLVDGAQGSVHGRHDLPGLGCDFYA FSGHKLYGPDGIGVLWGRPQALEQLAHWQFGGEMVRHTGFHEASFHAAPLGFEAGTPA VSAAIGLGATIDWLATLDEAEVAAHEGALHARLLAGLLARDGVSLLGEPQAALASFCV DGVHVADLAHLLGEQGIAVRAGHHCAMPLLQRLEVPGALRVSLGLYNDADDLERFFLA LDRSLELLR" misc_feature 4105943..4107040 /locus_tag="PA3667" /note="Aminotransferase class-V; Region: Aminotran_5; pfam00266" /db_xref="CDD:425567" misc_feature order(4106147..4106152,4106159..4106161,4106231..4106233, 4106462..4106464,4106468..4106473,4106531..4106533, 4106537..4106542) /locus_tag="PA3667" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99746" misc_feature 4106540..4106542 /locus_tag="PA3667" /note="catalytic residue [active]" /db_xref="CDD:99746" gene 4107076..4107498 /locus_tag="PA3668" /db_xref="GeneID:879154" CDS 4107076..4107498 /locus_tag="PA3668" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252358.1" /db_xref="GeneID:879154" /translation="MNPVLPEQAQEALDAFGHTASWEQRARLLLQWGERLAPLAEHER QEEHRVHGCESLVWLLGEQRDGHWRFRADSDARLIRGLLAVLLARVDGIETRELARLD LNDWFTCLGLSRQLSPSRSNGLNAVLQRMRELAGQTAG" misc_feature 4107076..4107495 /locus_tag="PA3668" /note="Sulfur transfer protein SufE, Fe-S cluster assembly [Posttranslational modification, protein turnover, chaperones]; Region: SufE; COG2166" /db_xref="CDD:441769" gene complement(4107505..4108485) /locus_tag="PA3669" /db_xref="GeneID:879155" CDS complement(4107505..4108485) /locus_tag="PA3669" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252359.1" /db_xref="GeneID:879155" /translation="MRRNTLIVLLALVAALAGTFAWLQRERAAEVPALPVAERWLPEL DSATLSGLHVQFADGSPDIRVERRAGAWVLPAKAGYPADRLRLSALLEALAEARKVEA KSANPKNHALLGLAERGEGQALRLSLQRQSGEPLVLLVGKDAQHGGSFVRRLGDPQAW LIDKRLPLPNNELEWLDRRIATLPFARVRELQLRYPKGERLDLYRDDAGQPNLQVRQL PTGRKLAYEAAANGAAALFADLRFADVAPLAQVGFRQAPLLLAFSLRTFSGARLDGEI RRQGEQYWLLPKSVEGFAEGEVAAHPDWAYRIEEDRYRALARHLPELLAR" misc_feature complement(<4107859..4108272) /locus_tag="PA3669" /note="Domain of unknown function (DUF4340); Region: DUF4340; pfam14238" /db_xref="CDD:433800" gene complement(4108489..4110336) /locus_tag="PA3670" /db_xref="GeneID:879768" CDS complement(4108489..4110336) /locus_tag="PA3670" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252360.1" /db_xref="GeneID:879768" /translation="MKRVLSSGAGLLLIALAFLAFNMVSGLLFSGARLDLTEQKLYTI SPGTKRILAGLDEPINLYFFYSDSGARELVPLRNYARRVEELLRAYEREANGRIRLQV IDPEPFSENEDKATEFGLQGIPLQQGGDNLYFGLAGSNALDGVQVIPFFPLDQEEFLE YDISRLVQTLAQPQRPVVGLMSSLPLNGGFDMASRQPTSPWMVMEEIRQQFDLRSLKS DATEIPPEVSVLLLVHPKQLPEQTLYAIDQFVLRGGKLLAFVDPFSEADSGSDFAATL DGDKSSDLAPLFEAWGLRLLPGKVLGDGAYAMSISLGRDQRPARHPAWLSLPREALDQ DDIATAGLESLTLATPGILERLPGASTSFTPLLQSSAQAMPFDASRFGLLRDPGDLMR ELRPSGRRHTLAARIQGPAKSAFAEGIEGHREGLKEARNINVIVVADTDLLSDRMWVQ VQDFFGQRVPQPWADNGALVVNALDNLSGTDALISVRSRGRFSRPFVVVERLQREAET SFRQKEEQLKQRLADTEQQLAALQQGADPEKAVELTPEQQATVRQYMQEKLRIRKELR EVQYQLNADIDALGRTLKLVNIALVPSLLTVGVLLGWLWRRRRMARGGH" misc_feature complement(4108801..4110273) /locus_tag="PA3670" /note="ABC-type uncharacterized transport system involved in gliding motility, auxiliary component [Cell motility]; Region: GldG; COG3225" /db_xref="CDD:442458" misc_feature complement(4108510..>4108848) /locus_tag="PA3670" /note="SH3 domain protein; Region: SH3_and_anchor; TIGR04211" /db_xref="CDD:275056" gene complement(4110347..4111081) /locus_tag="PA3671" /db_xref="GeneID:879769" CDS complement(4110347..4111081) /locus_tag="PA3671" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_252361.1" /db_xref="GeneID:879769" /translation="MKQLPVIFKRELASYFATPLAYVFIVIFLALAGVFTFYLGNFYE RNQADLASFFAFHPWLYLFLVPALAMRLWAEERKSGSIELLMTLPLTRFEAVAGKFLA AWAFAGIALLLTFPMVLTVNYLGEPDNGAILAGYLGSWLLAGGYLAIGSCMSALAKNQ VIAFILAVAACFLFMLSGFPLVLDAFSQWAPQWLLDAVASLSLLTRFDAVSKGVIDLR DLLYFVSLIVAWLAATAVAVDLKKAE" misc_feature complement(4110554..4111066) /locus_tag="PA3671" /note="ABC-type transport system involved in multi-copper enzyme maturation, permease component [Posttranslational modification, protein turnover, chaperones]; Region: NosY; COG1277" /db_xref="CDD:440888" gene complement(4111078..4112001) /locus_tag="PA3672" /db_xref="GeneID:880590" CDS complement(4111078..4112001) /locus_tag="PA3672" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_252362.1" /db_xref="GeneID:880590" /translation="MIETRNLGKRFGSRVAVDDLSFQVETGEVLGFLGPNGAGKSTTM KMLTGFLAPCAGTASIFGFDIRNRTLQAQRLIGYLPEGSPCYAEMTVQGFLDFIAEIR GYRGAGKRERVARALGLLELDEVRRQTIETLSKGFRRRVGLAQAILHEPRALVLDEPT DGLDPNQKHQVRELIRGLAQERIVIISTHILEEVSALCSRALVIGGGRLLADSTPLEL ASRSRYHQAVTLYSDEPLDAVALAVLPGVAGIEENPAEGSLTVLAQPGAVIFPQVSGL VAERGWRIRELDVERGRLDEVFRNLTRGTEA" misc_feature complement(4111339..4111998) /locus_tag="PA3672" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" gene 4112285..4114789 /gene="plsB" /locus_tag="PA3673" /db_xref="GeneID:880591" CDS 4112285..4114789 /gene="plsB" /locus_tag="PA3673" /EC_number="2.3.1.15" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate acyltransferase" /protein_id="NP_252363.1" /db_xref="GeneID:880591" /translation="MPRYPFRRFGFGALRRLLYLWVRSETINQSAFTLKIDRSKPVLY VLQQPSVSDLAVVDTECRKAGLPRPVMPVAVGDAIEPAAFFYLTPEPDWLGRQDKRGA SPTLVRMLAAVGQNGLDDAQIIPVSVFWGQSPDSESSPWKLLFADNWAVTGRLRKLAR ILILGRKTRVQFSAPIHLRELVEQGKGHERTLRMVNRILRVHFRNLKTAVIGPDLSHR RNLVKGLLRAPLVRQAISEECESERISQEKAEGIALRYANEIASDFSYPVIRFLEVIL SWFWNKLYEGVKVNHIERVQDVAQGNEIVYVPCHRSHIDYLLLSYLLFRNGLTPPHIA AGINLNMPVIGSILRRGGAFFMRRSFKGNQLYTAVFNEYLHTLFSRGFSTEYFVEGGR SRTGRMLHPRTGMLAITLRSFLRDSRRPIVFVPVYIGYERVLEGRTYLGELRGATKKK ESIFDLFKVVGALKQRFGQVWVNFGEPIHLDQFLDRHQPDWQDQDLGPEYRPDWLPQT TNLLAKDVARHLNDAAAINPVNLVALALLSTSRQALDESALARILDLYLALLRKVPYS PSATLPDGDGQALIEYVKSMNLLAEQKDALGRILYLDEQNAVLATYYRNNVLHVFALP ALIASFFQSNSRISREQLLRFARALYPYLQAELFIRWSLDELDAVIDQWLAALVEQDL LRQENDTFIRPAPSSRQYVLLILLARSVTQTLQRFYMAIALLLNAGQNALTAEELENL CTVMAQRLSILHGLNAPEFFDKSLFRHFIQTLLDLRVLRKDEAGKLSYHELLGELAEG AAKRVLPAEIRLSIRQVALERPAEEAAAESNDAAAN" misc_feature 4112291..4114729 /gene="plsB" /locus_tag="PA3673" /note="glycerol-3-phosphate 1-O-acyltransferase PlsB; Region: PRK04974" /db_xref="CDD:235325" misc_feature order(4113212..4113214,4113221..4113223,4113227..4113229, 4113290..4113301,4113452..4113460) /gene="plsB" /locus_tag="PA3673" /note="putative acyl-acceptor binding pocket [active]" /db_xref="CDD:153255" protein_bind 4114436..4114448 /gene="plsB" /locus_tag="PA3673" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="'Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3670, PA3674'" /bound_moiety="AmrZ" gene 4114933..4115331 /locus_tag="PA3674" /db_xref="GeneID:879773" CDS 4114933..4115331 /locus_tag="PA3674" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252364.1" /db_xref="GeneID:879773" /translation="MKKLPLLLAASILAGCGTQQSTSNASFDGEVFYRERIALPPSAR LSVSLEDVSLADAPSVQLASQTREITSQVPLAFHLEYDPKQVKPGHSYAVSARIELNG QLLFINTTRHSVKLDGSDPQPYRVQVESAR" misc_feature 4114933..4115328 /locus_tag="PA3674" /note="Uncharacterized lipoprotein YbaY [Function unknown]; Region: YbaY; COG3126" /db_xref="CDD:442360" gene 4115468..4116148 /locus_tag="PA3675" /db_xref="GeneID:879774" CDS 4115468..4116148 /locus_tag="PA3675" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252365.1" /db_xref="GeneID:879774" /translation="MFRLTALCAGLLLSANALALSLADLSQNDASSGLKDALTQGAQI AVRQLGQPGGFNNNPDVRIELPGKLGKAAKLMKQFGMGAQVDQLEASMNRAAEAAVPQ AQGLLVEAVKKMTVADAKGILKGGDDAATEYLDKSSREQLRAKFLPIVKQATDEVGLV KQYNAFASQAATLGVVDAKSANVEGYVTEQALDGLFEMIARQEKSIRQNPAAAATGLA KKVFGAAR" misc_feature 4115546..4116136 /locus_tag="PA3675" /note="Protein of unknown function (DUF4197); Region: DUF4197; pfam13852" /db_xref="CDD:433527" gene complement(4116188..4119265) /locus_tag="PA3676" /db_xref="GeneID:879602" CDS complement(4116188..4119265) /locus_tag="PA3676" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux transporter" /protein_id="NP_252366.1" /db_xref="GeneID:879602" /translation="MSFNLSAWALQNRQIVLYLMILLGAVGALSYSKLGQSEDPPFTF KAMVVQTNWPGASAEEVARQVTERIEKKLMETGDYDRIVSFSRPGVSQVTFMAREDIH SSEIPELWYQIRKKISDIRATLPQSIQGPFFNDEFGTTYGNIYALTGKGFDYAVMKDY ADRLQLQLQRIRNVGKVELIGLQDEKIWIDLSNTKLATLGLPLAAVQKALEEQNAVAS SGFFETASDRVQLRVSGRFDSVEEIRDFPIRVGDRTFRIGDVAEVRRGFNDPPAPRMR FMGEDAIGLAVAMKPGGDILVLGKALETEFARLQQSLPAGLELRKVSDQPAAVRTGVG EFIRVLAEALVIVLLVSFFSLGLRTGLVVALSIPLVLAMTFAAMHYFGIGLHKISLGA LVLALGLLVDDAIIAVEMMAVKMEQGYDRLKAASFAWTSTAFPMLTGTLITAAGFLPI ATAQSGTGEYTRSLFQVVTIALVVSWFAAVVFVPYLGAKLLPDLARLHAQKHGGSADG YDPYATAFYQRFRRLVEWCVRYRKTVIVLTLAAFVGALLLFRLVPQQFFPPSARLELL LDIKLAEGASLRSTGEEVQRLEKMLQGHDGIDNYVAYVGTGSPRFYLPLDQQLPAASF AQVVVLAKDLESREALRKWLIERMNEDFPHLRSRISRLENGPPVGYPVQFRVSGEDIP QVRELARKVADKMRENPHVVNVHLDWEEPSKVVYLSIDQERARALGVSTASLSQFLQS ALTGSHVSFFREDNELIEILLRGTEQERRDLSLLPSLAVPTENGRSVALSQIATLEYG FEEGIIWHRNRLPTVTVRADIYDDSLPATLVAQIAPTLEPIRAELPDGYLLEVGGTVE DAAKGQSSVNAGVPLFIVVVLSLLMVQLRSFSRMAMVFLTAPLGLIGVTLFLLLFRQP FGFVAMLGTIALAGMIMRNSVILVDQIEQDISHGLDRWHAIIEATVRRFRPIVLTALA AVLAMIPLSRSVFFGPMAVAIMGGLIVATVLTLLFLPALYAAWFRVKKDEARA" misc_feature complement(4116206..4119256) /locus_tag="PA3676" /note="Multidrug efflux pump subunit AcrB [Defense mechanisms]; Region: AcrB; COG0841" /db_xref="CDD:440603" gene complement(4119270..4120373) /locus_tag="PA3677" /db_xref="GeneID:879603" CDS complement(4119270..4120373) /locus_tag="PA3677" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux membrane fusion protein" /protein_id="NP_252367.1" /db_xref="GeneID:879603" /translation="MYRHIPLVALSLFSSLFLAACGNGTPPPAAARPAIVVQPQPAGE VSQAFPGEIRARHEPELAFRIGGKVIRRLVEVGERVKKDQPLAELDPQDVRLQLEAAR AQVSAAEANLQTVRAEYRRYRTLLDRNLVSHSQFENIQNSYRAGEARLKQIRAEFNVA DNQAGYAVLRSPQDGVIASRRVEVGQVVAAGQTVFSLAADGEREVLIGLPEHSFERFR IGQPVSVELWSQRDRRFAGHIRELSPAADPQSRTFAARVAFDDRATPAELGQSARVYV AAAEAVPLSVPLSALTAEAGQAFVWVVEPGSSTLRRQAVRTGPYAEDRVPVLEGLKAG DWVVATGVQVLREGQQVRPIDRANRTVKLAAKE" misc_feature complement(4119300..4120265) /locus_tag="PA3677" /note="Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms]; Region: AcrA; COG0845" /db_xref="CDD:440606" gene 4120469..4121107 /locus_tag="PA3678" /db_xref="GeneID:880594" CDS 4120469..4121107 /locus_tag="PA3678" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252368.1" /db_xref="GeneID:880594" /translation="MSESTSSVGPGRPKDPAKREAILEAAKRLFLCNGYDGSSMEAIA SEAGVSKLTVYSHFTDKETLFSEAVKAKCAEQLPALYFQLAEGAPLEKVLLNIARGFH RLINSHEAIALTRLMAAQAGQNPKLSELFFEAGPKQVIDEMERLLEQARRSGKLAFPD ARHAAEHFFMLVKGCANYRLLIGCAEPLDEAEGERHVEEVVALFLRAFAAGG" misc_feature 4120532..4120672 /locus_tag="PA3678" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:425684" misc_feature 4120745..4121098 /locus_tag="PA3678" /note="AefR-like transcriptional repressor, C-terminal domain; Region: TetR_C_7; pfam14246" /db_xref="CDD:433807" gene complement(4121114..4122391) /locus_tag="PA3679" /db_xref="GeneID:880595" CDS complement(4121114..4122391) /locus_tag="PA3679" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252369.1" /db_xref="GeneID:880595" /translation="MQQTIDCPIRRRLAHLPWANDGRAGVRHWLEMQRDPLAWLQKMH VAQPDLAVARMGPQRLWCLFHPQAVQELMVDRRDDLQRWQPALCMLKQWNGRSFMMRE GAPAQARRKEVRPHLAPPPASEVRRLAAEWGERVEEGREYDLDLEMAAFSVTLSGHAL FDVDLQPSAYRIAKAVRLLSRVALLEMSTGLPLGHWFPSKLCPRKRWALGQLREAVGE VAERSPRPLADLRDELCTLLMASHQSTGVTLTWSLLLLAQRPELLARLRAELAGVNWT AIRSVADLRDCALLRAVLQECLRLYPPAYGLAPRQVTADIEVFGQRLKRGDVTMVSSW ITQRDPRWFEAPLEFRPERFLEPARWPRGAYFPFGLGDRACPGTAMAMIDLAAALAYW VEHWDIMHDGDLAPRGWFSLRPQRARVRFRRRA" misc_feature complement(4121147..4122247) /locus_tag="PA3679" /note="cytochrome P450 (CYP) superfamily; Region: cytochrome_P450; cl41757" /db_xref="CDD:477761" misc_feature complement(order(4121249..4121254,4121261..4121275, 4121285..4121293,4121393..4121395,4121462..4121464, 4121471..4121473,4121498..4121500,4121648..4121650, 4121657..4121662,4121669..4121674,4121681..4121686, 4121924..4121926,4122062..4122064,4122074..4122076)) /locus_tag="PA3679" /note="heme binding site [chemical binding]; other site" /db_xref="CDD:410651" misc_feature complement(order(4121465..4121467,4121471..4121479, 4121660..4121662,4121672..4121677,4121684..4121686, 4121852..4121857)) /locus_tag="PA3679" /note="chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:410651" gene complement(4122420..4123205) /locus_tag="PA3680" /db_xref="GeneID:879150" CDS complement(4122420..4123205) /locus_tag="PA3680" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="ribosomal RNA small subunit methyltransferase J" /protein_id="NP_252370.1" /db_xref="GeneID:879150" /translation="MTDSAAPRLHVQALSADCAEAARRWAERLGLPLAADDEAEFAVQ VGEQGLQVLQLGADSPGPVRVDFVEGASAHRRKFGGGSGQMIAKAVGVQPGIRPRVLD ATAGLGRDGFVLASLGCEVTLVERQPLIAALLEDGLERARRDPDVAPIAARMRLLGGN SADLMRAWDGEAPQVVYLDPMFPHRDKSALVKKEMRLFRPLVGDDLDAPALLQAALAL ASHRVVVKRPRKAPIIEGPKPGYSLEGKSSRYDIYPKKALGKG" misc_feature complement(4122441..4123136) /locus_tag="PA3680" /note="Putative SAM-dependent methyltransferase; Region: SAM_MT; pfam04445" /db_xref="CDD:427952" misc_feature complement(order(4122669..4122671,4122723..4122731, 4122828..4122833,4122879..4122899)) /locus_tag="PA3680" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(4123261..4123956) /locus_tag="PA3681" /db_xref="GeneID:879151" CDS complement(4123261..4123956) /locus_tag="PA3681" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252371.1" /db_xref="GeneID:879151" /translation="MRRLAWLLPLLLLAGAVGALRYQWLDLPARWNPWLPLDVREPPN LLTRYKLWRLADDRSLCDAALATSQLRYQRVADDPPSATCPLSNSLRVRGAALELSSS FLASCPLAVSYALFERHVLQPAALDIYGQPLARVEHVGSFACRNVYNREDGRRSQHAS ANALDISGFRLADGRRIRLATDWAGESADGRFLRRVRDGACASFNAVLGPDYNAAHRD HFHLDMGLWKVCR" misc_feature complement(4123264..4123956) /locus_tag="PA3681" /note="Uncharacterized conserved protein, contains Extensin-like_C domain [Function unknown]; Region: COG3921" /db_xref="CDD:443126" gene complement(4123961..4124785) /locus_tag="PA3682" /db_xref="GeneID:879156" CDS complement(4123961..4124785) /locus_tag="PA3682" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252372.1" /db_xref="GeneID:879156" /translation="MTSQRQRAERFRDLHQGPGMLVLPNPWDAGSAKMLASLGFDALA TTSAGLAFSLGRRDAEGAVSRTEALENARAIVAATDLPVAADLENGYGDAPQDCATTI RLAAEAGLVGGSIEDASGRAGQPIYEFSAALERVAAAVEAARALPFPFTLCARAENFL HGREDLDDTLRRLRAYADAGADVLYAPGLNRREQIVAVLEAVAPKPINVLVGSPRLEL SLDELEALGVKRVSLGSNLARVAFGAFHQAAQALARRDLEATRAAMPFDRINDLFR" misc_feature complement(4124027..4124755) /locus_tag="PA3682" /note="Phosphoenolpyruvate phosphomutase; Region: PEP_mutase; pfam13714" /db_xref="CDD:433424" gene complement(4124858..4125724) /locus_tag="PA3683" /db_xref="GeneID:879157" CDS complement(4124858..4125724) /locus_tag="PA3683" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252373.1" /db_xref="GeneID:879157" /translation="MVSLPYFLGCPSWNEAAWRGSFYPRELRSADYLGHYGGIFNAVE GNTTFYARPSAETVRRWAETMPAGFRFCAKFPRDISHEGDLRERLEAAGDFLELLAPL GERVSPLWLQLSAAFTPQRLGELLYFLDELSPRRIAVEVRHPAFFDKGEDERLLNRHL RERGVERICLDSRALFSCRSDDPAVLHAQSKKPRLPIRPAAFSDTPQVRFIGGPDLPA NEVFLLPWVDKVADWIEAGLTPYVFLHTPDNHLAAQQAQRFHALLGQRLPGLPALPEP IPAPEVEQLGLL" misc_feature complement(4124903..4125712) /locus_tag="PA3683" /note="Protein of unknown function DUF72; Region: DUF72; cl00777" /db_xref="CDD:469916" gene complement(4125743..4126090) /locus_tag="PA3684" /db_xref="GeneID:879144" CDS complement(4125743..4126090) /locus_tag="PA3684" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252374.1" /db_xref="GeneID:879144" /translation="MRIDGLSSSSLPLERSARPGSAVTPYRDVQREVEARREQPAPVS GSQGFEQAPQARKVQASSAGGDSLPVSARDLLAFQRPVSSHAAMALASYNSTASLNID AGAEDVLGLDLYA" gene complement(4126164..4126844) /locus_tag="PA3685" /db_xref="GeneID:879145" CDS complement(4126164..4126844) /locus_tag="PA3685" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252375.1" /db_xref="GeneID:879145" /translation="MSTLLALDTSTEACSVALLHEGRALSHYEVIPRLHAQRLLPMVR DLLDEAGVALSAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALQRPVLAVSDLAILAQR AYREQGAERVAAAIDARMDEVYWGCYQLQQGEMRLAGSEAVLPPERVAVPWDAAAADW FGAGTGWGYVERMPQRPVALDASLLPHAEDLLSLAGFAWARGEGVEAEQALPVYLRDN VATPKKAP" misc_feature complement(4126170..4126838) /locus_tag="PA3685" /note="tRNA A37 threonylcarbamoyladenosine modification protein TsaB [Translation, ribosomal structure and biogenesis]; Region: TsaB; COG1214" /db_xref="CDD:440827" gene complement(4126948..4127595) /gene="adk" /locus_tag="PA3686" /db_xref="GeneID:879082" CDS complement(4126948..4127595) /gene="adk" /locus_tag="PA3686" /EC_number="2.7.4.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="adenylate kinase" /protein_id="NP_252376.1" /db_xref="GeneID:879082" /translation="MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSP LGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKDAGVT IDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDK EETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS" misc_feature complement(4126951..4127595) /gene="adk" /locus_tag="PA3686" /note="adenylate kinase; Reviewed; Region: adk; PRK00279" /db_xref="CDD:234711" gene complement(4127756..4130392) /gene="ppc" /locus_tag="PA3687" /db_xref="GeneID:879083" CDS complement(4127756..4130392) /gene="ppc" /locus_tag="PA3687" /EC_number="4.1.1.31" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate carboxylase" /protein_id="NP_252377.1" /db_xref="GeneID:879083" /translation="MPEIDARLREDVHQLGELLGDTIREQYGPRFLDKIELIRKGAKA ARRGSAEGAQQLTATLDGLEEDELLPVARAFNQFLNLANIAEQYHRIRRRRPNEPEPF ENLVLEELLGRLKDAGHAPGQLARQLAGLEIELVLTAHPTEVARRTLIQKYDAITAQL AAKDHADLLPEERSRIQQRLQRLVAEAWHTDEIRKVRPTPVDEAKWGFAVIEHSLWQA LPNVLRHVDEVLLRSTGERLPLTAAPLRFASWMGGDRDGNPNVTASVTREVLLLARWM AADLYLRDIDRLAAELSMQQASPQLLARVGDSAEPYRALLKQLRERLRVTRNWTHQAL AGEVPAAEGVLEHNRDLVEPLQLCHESLHACGMGVIADGALLDCLRRAATFGLFLVRL DVRQDSARHAAALSEITEYLELGSYDEWDEKTRLEFLLEELNSRRPLLPAHYQPSADT AEVLATCRAIAAAPPASLGSYVISMAGQPSDVLAVQLLLKESGVDWPMRVVPLFETLD DLDNAGPCMERLLTLPGYRSRLSGVQEVMIGYSDSAKDAGTLTAAWAQYRAQEKLVEI CRQHEVELLLFHGRGGTVGRGGGPAHAAILSQPPGSVAGRFRVTEQGEMIRFKFGLPD IAEQNLNLYLAAVLEATLMPPPAPEPAWRAQMDRLAKDALLAYRRVVRDDPQFVEYFR LATPEQELGRLPLGSRPAKRREGGVESLRAIPWIFAWTQTRLMLPAWLGWETALLNAI ERGEGALLGQMREQWPFFTTRIDMLEMVLAKADADIARLYDERLVPLELRPLGRRLRD LLSQAVRVVLGLTGQSLLLAHASETRESISVRNSYLDPLHLLQAELLARSRRCRGDAC GGLEQALLVTVAGVAAGLRNTG" misc_feature complement(4127759..4130392) /gene="ppc" /locus_tag="PA3687" /note="phosphoenolpyruvate carboxylase; Reviewed; Region: PRK00009" /db_xref="CDD:234570" gene 4130599..4130943 /locus_tag="PA3688" /db_xref="GeneID:879125" CDS 4130599..4130943 /locus_tag="PA3688" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252378.1" /db_xref="GeneID:879125" /translation="MKIRELVRHWEHTAKGRMARNQYSIPLDVESAARLAALHEMYPR RSVEELLGELVGAALEELEASFPYVKGSQVVATDEQGDPLYEDVGPTPRFLSLSRKYL HELVAQQDTSSH" gene complement(4130952..4131422) /locus_tag="PA3689" /db_xref="GeneID:879126" CDS complement(4130952..4131422) /locus_tag="PA3689" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252379.1" /db_xref="GeneID:879126" /translation="MKIGELAKRTGCPVETIRYYEREGLLPEPARSEGNYRQYTLAHV ERLSFIRHCRSLDMTQEEIRTLLALRDRPEADCGTANRLIDEHLHHVEVRIAELQALR EQLRDLGSRCTVAGNSQACGILRELEQPAPLSPIAEECAEAGHMHVPGVHRRHG" misc_feature complement(4131042..4131422) /locus_tag="PA3689" /note="Helix-Turn-Helix DNA binding domain of the CadR and PbrR transcription regulators; Region: HTH_CadR-PbrR; cd04784" /db_xref="CDD:133411" misc_feature complement(order(4131312..4131320,4131369..4131371, 4131411..4131419)) /locus_tag="PA3689" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133411" misc_feature complement(order(4131054..4131056,4131060..4131062, 4131078..4131083,4131096..4131098,4131117..4131122, 4131129..4131131,4131141..4131143,4131159..4131161, 4131171..4131173,4131180..4131182,4131189..4131194, 4131225..4131227,4131252..4131257,4131267..4131269, 4131276..4131278)) /locus_tag="PA3689" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133411" misc_feature complement(order(4131060..4131062,4131087..4131089, 4131192..4131194)) /locus_tag="PA3689" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:133411" gene 4131536..4133758 /locus_tag="PA3690" /db_xref="GeneID:879136" CDS 4131536..4133758 /locus_tag="PA3690" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="metal-transporting P-type ATPase" /protein_id="NP_252380.1" /db_xref="GeneID:879136" /translation="MSHEHADTCCHGHGHGHDHGHRHAPRPAVAAIGTLAGNAELRWS DLRIEAMDCPTEERLIRDALGRQPAVESLEFNLMQRLLRVQHRFDSVEPLQKLIAGLG MQAVPLDAGENTDGPSQAPAKPWWPLALAGAMALASEIVEWFGLAPDWVVAGLALLAI LGAGLPTYRKGWIALKNRNLNINALMSIAVTGAVLIGQWPEAAMVSVLFAIAELIEAK SLDRARNAIRGLLQLAPEQATVLVGGEWKELPAKQVELEATVRVKPGERIALDGEVTS GRSSVNQAPITGESLPVEKEVGEPVFAGSINGEGALEYRVTRRADDSTLARIIHAVEE AQGSRAPTQRFVDSFARVYTPVVFLIALATAVLPPLLFGGAWLDWIYRALVLLVIACP CALVISTPVTIVSGLSAAARLGILIKGGVFLELGRKLSWVALDKTGTITHGKPQQTDY LPIAEADGTDARLLAASLAARSDHPVSRAVANAAEEDGLALGVVEDLAALPGRGVSGR IDGVLYHLGNHRLVEELGLCSPALEERLDALERQGKTVIALCDPQRVRALFAVADGVK DSSREAIHELHALDVKTLMLTGDNPHTAAAIAAQVGIDAARGNLLPEDKLREVEARQA DGSRVGMVGDGINDAPALARADIGFAMGAAGTDTAIETAGVALMDDDLRKLPQFVRLS RTTHAILVQNITLALGIKAVFLALTLAGEGTLWMAVFADMGASLLVVFNGLRLLRKRF " misc_feature 4131668..4131850 /locus_tag="PA3690" /note="Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain...; Region: HMA; cd00371" /db_xref="CDD:238219" misc_feature order(4131686..4131694,4131701..4131703) /locus_tag="PA3690" /note="metal-binding site [ion binding]" /db_xref="CDD:238219" misc_feature 4131956..4133746 /locus_tag="PA3690" /note="P-type heavy metal-transporting ATPase, similar to Staphylococcus aureus plasmid pI258 CadA, a cadmium-efflux ATPase; Region: P-type_ATPase_Cd-like; cd07545" /db_xref="CDD:319845" misc_feature order(4132706..4132708,4132712..4132714,4133630..4133635, 4133696..4133698,4133708..4133710) /locus_tag="PA3690" /note="putative HM ion binding site [ion binding]; other site" /db_xref="CDD:319845" misc_feature order(4132838..4132846,4133033..4133035,4133081..4133089, 4133174..4133176,4133294..4133302,4133360..4133362, 4133369..4133371,4133378..4133380,4133435..4133437, 4133444..4133446) /locus_tag="PA3690" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:319845" protein_bind complement(4133889..4133901) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3691" /bound_moiety="AmrZ" gene 4134138..4134542 /locus_tag="PA3691" /db_xref="GeneID:879137" CDS 4134138..4134542 /locus_tag="PA3691" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252381.1" /db_xref="GeneID:879137" /translation="MEQKAMSKQHTGSLRGLKLALLAVGTSLVLAGCAGNPPTEQFAV TESAVNNAVSAGGPEYAPVEMKSAQDKLSQARIAMNDKEYDQAKRLAQQAEWDARVAE RKTQAAKAQKAVKDAQQGVMELREEGMRDTQH" misc_feature 4134255..4134488 /locus_tag="PA3691" /note="Domain of unknown function (DUF4398); Region: DUF4398; pfam14346" /db_xref="CDD:464144" gene 4134591..4135376 /gene="lptF" /locus_tag="PA3692" /db_xref="GeneID:879104" CDS 4134591..4135376 /gene="lptF" /locus_tag="PA3692" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="outer membrane porin F" /protein_id="NP_252382.1" /db_xref="GeneID:879104" /translation="MRKYIALPAVSLLALALAACSTPPNANLEQARSNFSALQSQPDA TKVAALETKDAGDWLAKADKAYQDGEDQRDVDQLAYLTNQRIELAKQTIVLRNAEAQL QNASAQRAQARLDARTAQLDKLRSQLNAKQTSRGTMVTFGDVLFDLDKSDLKPGAMRN IQQLAEFLQQNPERQVIVEGYTDSTGSANYNQRLSERRADSVRMALLSRGISPERVAT RGYGKEYPVASNGTSSGRAMNRRVEVTISNDAKPVAPRSSVSG" misc_feature <4134657..4135337 /gene="lptF" /locus_tag="PA3692" /note="Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall/membrane/envelope biogenesis]; Region: OmpA; COG2885" /db_xref="CDD:442131" misc_feature 4135017..4135328 /gene="lptF" /locus_tag="PA3692" /note="Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; Region: OmpA_C-like; cd07185" /db_xref="CDD:143586" misc_feature order(4135032..4135037,4135134..4135139,4135146..4135148, 4135158..4135163,4135170..4135172,4135296..4135298, 4135308..4135310) /gene="lptF" /locus_tag="PA3692" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:143586" gene complement(4135452..4135973) /locus_tag="PA3693" /db_xref="GeneID:879105" CDS complement(4135452..4135973) /locus_tag="PA3693" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252383.1" /db_xref="GeneID:879105" /translation="MTEVRVWQGDITRLAVDAIVNAANSSLLGGGGVDGAIHRAAGAE LVAACRLLHGCKTGEAKITRGFRLPAAHVIHTVGPVWRGGDNGEAELLASCYRRSLAL AEQAGAASVAFPAISCGIYGYPLEQAAAIAVEEVCRQRPAHSSLEEIVLVAFDSSMAE RYQRLLGERPVAR" misc_feature complement(4135473..4135964) /locus_tag="PA3693" /note="macrodomain, O-acetyl-ADP-ribose (OAADPr) family; Region: Macro_OAADPr_deacetylase; cd02908" /db_xref="CDD:438955" misc_feature complement(order(4135500..4135502,4135509..4135514, 4135518..4135520,4135611..4135634,4135734..4135736, 4135740..4135742,4135857..4135859,4135866..4135868, 4135872..4135889,4135902..4135910,4135941..4135949)) /locus_tag="PA3693" /note="active site" /db_xref="CDD:438955" gene complement(4135970..4136293) /locus_tag="PA3694" /db_xref="GeneID:879088" CDS complement(4135970..4136293) /locus_tag="PA3694" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252384.1" /db_xref="GeneID:879088" /translation="MSDRNVLPCILTGIGTIFVTVGVLWYYGYLHFAKPQDALLLADF TMLKSLPGEDVKLSLEPAKQVAQCIDGVLVLFDTEQKGLSGVLVDNRKHAVRCAGQEV PQEVK" gene complement(4136290..4137195) /locus_tag="PA3695" /db_xref="GeneID:879089" CDS complement(4136290..4137195) /locus_tag="PA3695" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252385.1" /db_xref="GeneID:879089" /translation="MKRLLIPLLVLGALFLGGCSSLLFYPEPVVQITPARAGLEYRDV TLTTADGVRLRAWWLPAKKGVPVKGTVLYLHGNGGNLSWHLGGTWWLPAEGYQVLMLD YRGYGQSEGQPGLPEVYRDIDAAFAWLDQAPEVKGTERVLLGQSLGGALAIHYLAEHP QRQGQFKALVFDGVPASYRGIARHMLDGSWLTWPLQVPLSWLVPDDDSAIHSVARLSG APMLFFHSIDDTIVPLENGIALYRQARPPKVLQLTRGGHVQTFAEATWQEVMLRFLDD PHGFTGLRRLAEIPNRESAKPEGNP" misc_feature complement(<4137046..4137195) /locus_tag="PA3695" /note="Uncharacterized lipoprotein; Region: Lipoprotein_16; cl19472" /db_xref="CDD:473174" misc_feature complement(4136368..4137096) /locus_tag="PA3695" /note="Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; Region: FrsA; COG1073" /db_xref="CDD:440691" gene complement(4137192..4137938) /locus_tag="PA3696" /db_xref="GeneID:879093" CDS complement(4137192..4137938) /locus_tag="PA3696" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252386.1" /db_xref="GeneID:879093" /translation="MASHELDYRILGESMQTVEIELDPGETVIAEAGAMNYMTGDIRF TARMGDGSDGSLLGKLWSAGKRKLGGESVFMTHFTNEGQGKQHVAFAAPYPGSVVAVD LDDVGGRLFCQKDSFLCAAYGTRVGIAFTKRLGAGFFGGEGFILQKLEGDGLVFVHAG GTLIRRQLNGETLRVDTGCLVAFTDGIDYDVQLAGGLKSMLFGGEGLLLTTLKGSGTV WLQSLPFSRLAGRIYDATFRAREEVRTNNG" misc_feature complement(4137261..4137920) /locus_tag="PA3696" /note="AIM24 protein, required for mitochondrial respiration [Energy production and conversion]; Region: AIM24; COG2013" /db_xref="CDD:441616" gene complement(4138007..4139302) /locus_tag="PA3697" /db_xref="GeneID:879094" CDS complement(4138007..4139302) /locus_tag="PA3697" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252387.1" /db_xref="GeneID:879094" /translation="MSQRKAQNDYQKIIRSLSDRIVEAQTPIRVLDAIKWDDGIRQDF LKGRGKHAPKVDRGYYDSRPLAFDASAKKQEFQNIERDITRQLGQFNPVGQIMRRMCK EYRMVIRMLEARGTPDLGLISQELYGSASDAFHAGDPTLADLGLMLSDYLNNIADRGD LKDEPKTLTAKEVVPILQARLNTVFGEEEGTIRVFESDGIVADAAAGADYIKVRADAL FNERDVRALEVHEGLVHVGTTLNGLSQPICTFLAKGPPSSTVTQEGLAILMEVIAFAS YPTRLRKLTNRTRAIHMAEEGADFLDVFHFYREQGYSLEDSYQNASRVFRGSTPDGLP FTKDLSYLKGFILIYNYIQLAVRKGKLEQIPLLFCGKTTLEDMRTLRQLVDEGLVAPP KYLPPQFRDLNALSAWMCFSNFLNHLSLDRIEADYANIL" misc_feature complement(4138052..4139179) /locus_tag="PA3697" /note="Domain of unknown function (DUF1704); Region: DUF1704; pfam08014" /db_xref="CDD:429786" gene complement(4139311..4139862) /locus_tag="PA3698" /db_xref="GeneID:879134" CDS complement(4139311..4139862) /locus_tag="PA3698" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252388.1" /db_xref="GeneID:879134" /translation="MKAWRCLVVLSFLLLGGCLVTFKEPIPPREAAPSHLLGTWSREN EWKEEQFLEITRSGSNVYRALSYVDSKDNTESLEDYGFTVSHQGKRWYLSAGLPKSLG GNFIIAGFEITDGDELVIYNLDVERIVEDLGAGQLDGETVDSDQGKGALVRSPLAKVF AYLNDPANSDVFVEAARFQRVTQ" gene complement(4139959..4140672) /locus_tag="PA3699" /db_xref="GeneID:879135" CDS complement(4139959..4140672) /locus_tag="PA3699" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252389.1" /db_xref="GeneID:879135" /translation="MSRVAPRDSAAQAASAVAESVRYQGRKASRQGSEQRRQAILDAA MRLIVRDGVRAVRHRAVAAEAQVPLSATTYYFKDIDDLITDTFALFVERNAEALSAFW SSVEGDLQEMAAVLADDPGARGSLVERIVELAVQYVQVQLTERREHLLAEQAFRQEAL LNPRLRELADAHQRILSLGAVHFFQVLGSGQPEQDAKVLTSIILQMEYQGLVDGVEQL AVDEMRAILRRYLNLVMGL" misc_feature complement(4139965..4140591) /locus_tag="PA3699" /note="DNA-binding transcriptional regulator YbjK [Transcription]; Region: YbjK; COG3226" /db_xref="CDD:442459" gene complement(4140884..4142389) /gene="lysS" /locus_tag="PA3700" /db_xref="GeneID:880383" CDS complement(4140884..4142389) /gene="lysS" /locus_tag="PA3700" /EC_number="6.1.1.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="lysine--tRNA ligase" /protein_id="NP_252390.1" /db_xref="GeneID:880383" /translation="MSDQQLDQHELQQEENKLIAQRKEKLAAVREARAIAFPNDFRRD AYFADLQKQYADKTKEELEAAAIPVKVAGRIMLNRGSFIVLQDSSERLQVYVNRKTLP EETLAEIKTWDLGDIIGAEGVLARSGKGDLYVDMTSVRLLTKSLRPLPDKHHGLTDTE QRYRQRYVDLMVNEETRHTFRVRSQVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKP FETHHNALDMAMFLRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEF YQAYADYEDNMDLTEELFRELAQSVLGTTDVPYGDKVFHFGEPFVRLSVFDSILKYNP EITAADLNDVEKARAIAKKAGAKVLGHEGLGKLQVMIFEELVEHKLEQPHFITRYPFE VSPLARRNDEDPSVTDRFELFIGGREIANAYSELNDAEDQAERFMLQVKEKDAGDDEA MHYDADFINALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMRPQA" misc_feature complement(4140887..4142353) /gene="lysS" /locus_tag="PA3700" /note="lysyl-tRNA synthetase; Reviewed; Region: lysS; PRK00484" /db_xref="CDD:234778" misc_feature complement(4141763..4141777) /gene="lysS" /locus_tag="PA3700" /note="motif 1; other site" /db_xref="CDD:238398" misc_feature complement(order(4140959..4140961,4141115..4141117, 4141127..4141129,4141136..4141138,4141157..4141159, 4141577..4141579,4141589..4141591,4141607..4141609, 4141613..4141615,4141679..4141681)) /gene="lysS" /locus_tag="PA3700" /note="active site" /db_xref="CDD:238398" misc_feature complement(4141607..4141618) /gene="lysS" /locus_tag="PA3700" /note="motif 2; other site" /db_xref="CDD:238398" misc_feature complement(4140959..4140970) /gene="lysS" /locus_tag="PA3700" /note="motif 3; other site" /db_xref="CDD:238398" gene complement(4142570..4143665) /gene="prfB" /locus_tag="PA3701" /note="peptide chain release factor 2; product name confidence: class 2 (high similarity to functionally studied protein); This gene contains a frameshift that has been confirmed in the final assembly. Contains a high homolgy to Escherichia coli prfB which also has an in-frame UGA termination codon located in sequence and is a naturally occurring. +1 frameshift (ribosomal slippage) is required for synthesis of RF-2.'" /db_xref="GeneID:880384" CDS complement(join(4142570..4143593,4143595..4143665)) /gene="prfB" /locus_tag="PA3701" /ribosomal_slippage /codon_start=1 /transl_table=11 /product="peptide chain release factor 1" /protein_id="YP_003933612.1" /db_xref="GeneID:880384" /translation="MEINPILNSIKDLSERTQTIRGYLDYDQKHDRLVEVNRELEDPN VWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADSRDLLDMAVEEDDEGAVDDVANEV ERLREILEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGF DATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTA VFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNE RSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDSKSDIGWGHQIRSYVLDQSRIKD LRTGIERSDCDKVLDGDLDEYLEASLKQGL" misc_feature complement(join(4142573..4143593,4143595..4143662)) /gene="prfB" /locus_tag="PA3701" /note="This domain is found in peptide chain release factors; Region: PCRF; cl40670" /db_xref="CDD:477417" gene complement(4143788..4144831) /gene="wspR" /locus_tag="PA3702" /db_xref="GeneID:878337" CDS complement(4143788..4144831) /gene="wspR" /locus_tag="PA3702" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_252391.1" /db_xref="GeneID:878337" /translation="MHNPHESKTDLGAPLDGAVMVLLVDDQAMIGEAVRRSLASEAGI DFHFCSDPQQAVAVANQIKPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIVLSTK EEPTVKSAAFAAGANDYLVKLPDAIELVARIRYHSRSYIALQQRDEAYRALRESQQQL LETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYND TFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRR TVESLQISHDQPRPGSHLTVSIGVSTLVPGGGGQTFRVLIEMADQALYQAKNNGRNQV GLMEQPVPPAPAG" misc_feature complement(4144394..4144777) /gene="wspR" /locus_tag="PA3702" /note="phosphoacceptor receiver (REC) domain of WspR response regulator and similar proteins; Region: REC_WspR-like; cd17575" /db_xref="CDD:381117" misc_feature complement(4143830..>4144771) /gene="wspR" /locus_tag="PA3702" /note="response regulator PleD; Reviewed; Region: pleD; PRK09581" /db_xref="CDD:236577" misc_feature complement(order(4144394..4144399,4144403..4144408, 4144415..4144420,4144424..4144429,4144436..4144441, 4144448..4144453,4144457..4144459,4144475..4144483, 4144496..4144498,4144508..4144510,4144547..4144549)) /gene="wspR" /locus_tag="PA3702" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:381117" gene complement(4144939..4145946) /gene="wspF" /locus_tag="PA3703" /db_xref="GeneID:878338" CDS complement(4144939..4145946) /gene="wspF" /locus_tag="PA3703" /EC_number="3.1.1.61" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis-specific methylesterase" /protein_id="NP_252392.1" /db_xref="GeneID:878338" /translation="MRIGIVNDMPLAVEALRRALAFEPQHQIVWVASNGAEAVTQCAA DTPDVVLMDLLMPVMDGVEATRRIMAESPCAIVIVTVDIEQNVHRVFEAMGYGALDAV NTPALGIGNPQTAAAPLLRKIQNVGWLIGQRDNRGKVQVVPPKAGGARQRLVAIGASA GGPASLAVLLKQLPASFNAAVVLVQHVDEVFAAGMAEWLASESKLPVRLARDGEPPIP GQILLAGTNNHIRLLRNGSLVYTAEPRSFVYRPSIDVFFESVANYWRGDAVGVLLTGM GRDGAQGLKQMRERGFLTIAQDQASCAVYGMPKAAAAIDAAVQILSLEKIAPRLAEVF D" misc_feature complement(4144945..4145946) /gene="wspF" /locus_tag="PA3703" /note="chemotaxis-specific protein-glutamate methyltransferase CheB; Region: PRK12555" /db_xref="CDD:237135" gene complement(4145943..4148252) /gene="wspE" /locus_tag="PA3704" /db_xref="GeneID:880394" CDS complement(4145943..4148252) /gene="wspE" /locus_tag="PA3704" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis sensor/effector fusion protein" /protein_id="NP_252393.1" /db_xref="GeneID:880394" /translation="MTPDQMRDASLLELFRLEAEAQTQVLNAGLMALERSPTQADQLE ACMRAAHSLKGAARIVGLDAGVRVAHVMEDCLVEAQDGRLLLQSEHIDALLQGCDLLL RIGTPPAGDAGWAEGAGREEIDGLVLRLEGLVRSGLPLARAELPATTPGLPEAVPEAP PAASAAASDDNDEEPAGQAGGEQAEERRSRVLRVTAERLDRLLDISSKSLVEFQRIKP LADSLQRLRRLQSSASRALDVVRETVQETALDPQAQAMLGEARQLIGECQQMLVQHIA DLDEFAWQGGQRAQVLYDAALASRMRPFADVLSGQARMVRDLGRSLGKQVRLLVEGES TQVDRDVLEKLEAPLTHLLRNAVDHGIEAPETRLAAGKPAEGRITIRARHHAGMLVLE LSDDGGGIDLQRLRETVLNRQFATAETVAQLSEEELLAFLFLPGFSMREQVTEVSGRG VGLDAVQHMVRQLRGGVRMEQRQGQGALFHVEVPLTLSVVRSLVVEIGEEAYAFPLAH IERMCELEAEEIVQLEGRQHFWYEGRHVGLVSAAQLLQRPESSRTEGAIPVVVVRDRD AVYGVAVERFVGERTLVVMPLDPRLGKVRDVSAGALLDDGSPVLILDVEDLLHSVGKL LSSGRLERIDRSRRQAGGAQRKRILVVDDSLTVRELERKLLLGRGYDVAVAVDGMDGW NALRSEHFDLLITDIDMPRMDGIELVTLVRRDSRLQSLPVMVVSYKDREEDRRRGLDA GADYYLAKASFHDEALLDAVVVLIGEAQG" misc_feature complement(4146363..4148237) /gene="wspE" /locus_tag="PA3704" /note="Chemotaxis protein histidine kinase CheA [Signal transduction mechanisms]; Region: CheA; COG0643" /db_xref="CDD:440408" misc_feature complement(4146009..4146311) /gene="wspE" /locus_tag="PA3704" /note="phosphoacceptor receiver (REC) domain of chemotaxis protein CheV and similar proteins; Region: REC_CheV-like; cd19924" /db_xref="CDD:381151" gene complement(4148249..4148938) /gene="wspD" /locus_tag="PA3705" /db_xref="GeneID:880395" CDS complement(4148249..4148938) /gene="wspD" /locus_tag="PA3705" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252394.1" /db_xref="GeneID:880395" /translation="MVEASLTLLDTQQVDDCWNRIGVHGDKSCERLAEHVHCRNCEVY AAAATYLLDRIALRQDQLDSAETMDSQREQSDLGETRSILVFRLGEEWFGLATGSLVE VAPMNPIHSLPHQRSRALQGVTNVRGALVACLSLGELLDLEPGAAPVSERRVVPRMLI ISAAGGPVVAPVEEVDGIHAIPLARILPPNHADGQASRRHVAGVLQWRERSITLLDEG PLLQAVARSLA" misc_feature complement(4148291..4148704) /gene="wspD" /locus_tag="PA3705" /note="Chemotaxis signal transduction protein CheW [Signal transduction mechanisms]; Region: CheW; COG0835" /db_xref="CDD:440597" gene complement(4148931..4150199) /gene="wspC" /locus_tag="PA3706" /db_xref="GeneID:878238" CDS complement(4148931..4150199) /gene="wspC" /locus_tag="PA3706" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="biofilm formation methyltransferase WspC" /protein_id="NP_252395.1" /db_xref="GeneID:878238" /translation="MNDRFERLLKSRIGLDASSVGSAVIERAVRQRMSGLALHDEDEY WMRLNGSPGEVQALIEAVVVPETWFFRYPESFTTLARLAFERLPSLGGGRALRILSLP CSTGEEPYSIVMALLDAGLSEYLFEVDALDVSARVIERASLGVYGRNSFRGDELGFRD RHFSEVAEGYQLAEQVRRKVRFRCGNLLDPGLLAGEAPYDFVFCRNLLIYFDRPTQSE VVEVLKRLLRPDGAMFIGPAEASLLSQHGMQPIGVPLSFVFRRTSEAPRGARPKAVSD GARPVVAAAVERASIRPSPPPPAKPRQRLSSLVPPASGQPLASPVGEFDEIARLADAG QHREARAACERQLAARGPSATVFYWLGLLSDVAGQEQEAQDFYRKALYLEPQHAEALA HLAALLAARGDHAGARRLQQRAARGVNKDG" misc_feature complement(4149408..4150193) /gene="wspC" /locus_tag="PA3706" /note="Methylase of chemotaxis methyl-accepting proteins [Signal transduction mechanisms]; Region: CheR; COG1352" /db_xref="CDD:440963" misc_feature complement(<4148952..>4149212) /gene="wspC" /locus_tag="PA3706" /note="Tetratricopeptide (TPR) repeat [General function prediction only]; Region: TPR; COG0457" /db_xref="CDD:440225" misc_feature complement(4149051..4149143) /gene="wspC" /locus_tag="PA3706" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(4148952..4149038) /gene="wspC" /locus_tag="PA3706" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" gene complement(4150196..4150711) /locus_tag="PA3707" /db_xref="GeneID:878239" CDS complement(4150196..4150711) /locus_tag="PA3707" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252396.1" /db_xref="GeneID:878239" /translation="MTVSRSTGDHRRTSKLFLLFRMEGDRYALDAREVVEVLPLLRLK RIPEAPEWVAGVFSHRGVLVPVLDLCAMAFGRAALARTSTRIVLVEYRARQDREPVWL GLILEQATDTLRCEPSAFRDYGLDNGGARYLGPVYEGPRGLVQWVRVEALLPDEVRAL LFPPECGEGTA" misc_feature complement(4150229..4150663) /locus_tag="PA3707" /note="Chemotaxis signal transduction protein CheW [Signal transduction mechanisms]; Region: CheW; COG0835" /db_xref="CDD:440597" gene complement(4150716..4152344) /gene="wspA" /locus_tag="PA3708" /db_xref="GeneID:880409" CDS complement(4150716..4152344) /gene="wspA" /locus_tag="PA3708" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_252397.1" /db_xref="GeneID:880409" /translation="MKNWTVRQRILASFAVIIAIMLLMAATAYVKMLTVEKGAYRVQD DAMPGMYFITLVRSSWTDNYLQTQELFGITDDHELSKAEADSILASEERLDQQIASYQ KTMNPDEARDHELLAGFQAVRKDYLEQHDKVLELYREKRFEEAGKLVAGPLTEHWREG RKYLNEMIELNKDIADRASDNIVNAVDDAELSMLVTLLLAVVVAGICGFLLLRAITQP IQKIVRSLDLMAGGDLTARLNLGRRDEFGAIETGFNGMAEELKGLVSQAQRSSVQVTT SVTEIAATSKQQQATATETAATTTEIGATSREIAATSRDLVRTMSEVSGAAEQTSTLA GSGQLGLARMEETMHHVMGAADLVNAKLAILNEKAGNINQVVTTIVKVADQTNLLSLN AAIEAEKAGEYGRGFAVVATEVRRLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFS EEVRRGIAEVGQVGEQLSQIIQQVQALAPRVQMVNEGMQAQATGAEQINQALVQLGEA TGQTVESLRQASFAIDELNLVANGLRNGVSRFKV" misc_feature complement(4150719..4152317) /gene="wspA" /locus_tag="PA3708" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene complement(4152611..4154230) /locus_tag="PA3709" /db_xref="GeneID:880410" CDS complement(4152611..4154230) /locus_tag="PA3709" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_252398.1" /db_xref="GeneID:880410" /translation="MTEYATTPSYTVPATTPQEERKVIFASSLGTVFEWYDFFLYGAL AAVISKQFFAGVNDTTAFIFALMAFAAGFLVRPFGALVFGRLGDMIGRKYTFLVTILL MGLSTFAVGLLPTYASIGVAAPIILVTLRMLQGLALGGEYGGAAIYVAEHAPANKRGS YTSWIQSTATLGLLLSLLVILACRQLTGDEFETWGWRLPFLLSIVLLGISTWIRLSMR ESPAFLKMKAEGKVSKAPLRESFTQWGNLKVVLTALFSINAGQAVTFYTAQFYVLFFL TQVLKVDGGTANGLLIVALVLGAPFFIVAGWLSDRIGRKPVLLAGLLLATLFYFPLFK GLTHYANPAIDQASRQSPISVVADPATCTFQFDPVGKATFDSPCDKVKTFLVKAGLPY STVAAPAGSDVRVRIGETEIAGFDAEAMAAAVKTAGYPQQADGSQVNKPMVIAIIFAL VLISTLCYGPLAALMVELFPTRIRYSSLSLPYHIGNGWFGGFLPTVSFALVVYTGDIF YGLWYPVLITGGSLVCALLFLRETRHTDIHR" misc_feature complement(4152650..4154170) /locus_tag="PA3709" /note="Shikimate transporter and similar proteins of the Major Facilitator Superfamily; Region: MFS_ShiA_like; cd17369" /db_xref="CDD:340927" misc_feature complement(order(4152764..4152766,4152773..4152778, 4152785..4152790,4152797..4152799,4152845..4152847, 4152857..4152859,4152869..4152874,4153325..4153327, 4153337..4153339,4153421..4153423,4153430..4153438, 4153445..4153450,4153457..4153459,4153712..4153714, 4153721..4153726,4153733..4153735,4153793..4153795, 4153802..4153810,4153814..4153819,4153991..4153993, 4154105..4154107,4154114..4154119,4154126..4154131)) /locus_tag="PA3709" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340927" gene complement(4154339..4156012) /locus_tag="PA3710" /db_xref="GeneID:879119" CDS complement(4154339..4156012) /locus_tag="PA3710" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="GMC-type oxidoreductase" /protein_id="NP_252399.1" /db_xref="GeneID:879119" /translation="MPEVLDTYDYLIVGAGPAGCLLANRLSADPANRVLLLEAGGPDN YPWIHIPVGYLYCIGNPRTDWCFDTDEVPGLNGRSLKYPRGKVLGGCSSINGMIYMRG QARDYDQWVAEGNPGWSWRELLPLFRRMEDHFAGTSEMHGAGGEWRVERQRLSWKLLD AFQQAAAQTGIASVEDFNGGDNEGCGYFQVNQRGGVRWNASKGFLRGIAQRANLTVLT HAEVQRVLLEDGRARALSVRWQGREQRFEACREIVLSAGAIGSPCLLQRSGIGPRDLL ERLGAGVVHELPGVGGNLQDHLQLRMIYKVDGVPTLNQIAGSLWGKLGMGLRYLASRS GPLSMAPSQLGAFARSDPQQPSANLEYHVQPLSLDRFGEPLHAFPAFTASVCDLRPHS RGTVRIRSLDPGEAPSIQPNYLSDPRDLKVAADAIRLTRRIAAAPALAAFRPQEYKPG PEYRSEEDLQRAAAEIGTTIFHPAGTCRMGQGPQAVVDAQLRVHGIPGLRIADASIMP SLTSGNTCSPVLVIAEKAAQMILAERRREAAPQVVESAMAAGGKEAVEA" misc_feature complement(4154405..4156000) /locus_tag="PA3710" /note="Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Region: BetA; COG2303" /db_xref="CDD:441878" gene 4156184..4157089 /locus_tag="PA3711" /db_xref="GeneID:879120" CDS 4156184..4157089 /locus_tag="PA3711" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252400.1" /db_xref="GeneID:879120" /translation="MFDWNDLRFFLELQRSGRLLTAAKRLGTTHATVARHIENIERDL GTQLFAQHTGGYQLTPAGQALLKHAEAMENTALLAQEEMSQSISPLGQIRIGVTEGLG SVFLAPRLAQLMRHYPGLEVELVSVPRFVSITNREADIAISLDRPSADLVITRLLTRY RLALFASPAYLEQAPPLRDRDDLGRHQWIGYVDDLLFSQELMFHHSFCRHPQVVFRST SVVAQQQAAQAGIGLAILPHFMGSRDPLLVPVLPEESIQREYWMSTRRELHRSVRLRV VWDFLLELCQREREVLLGPSATPPP" misc_feature 4156187..4157044 /locus_tag="PA3711" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene complement(4157126..4157821) /locus_tag="PA3712" /db_xref="GeneID:880403" CDS complement(4157126..4157821) /locus_tag="PA3712" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252401.1" /db_xref="GeneID:880403" /translation="MNTRGLLDQLLKSGQEMLQNKSGGKPGASGGGQLGSLLSGAGGG ALAAGAIGLLLGNKKARKFGGKAITYGGLAALGVIAYKAYNNWQQQQNGAAPQAQPQT VDRLPEAQAEVHSHAILQAIVGAAKADGHIDERERQMIEGEVAKLTSDREVQGWLERE LNKPLDPAEIARAASTPEIAAEMYLASLLMVDEESFMERSYLEELARQLRLEPSFKLE LENQARQALQRLA" misc_feature complement(4157153..4157821) /locus_tag="PA3712" /note="Uncharacterized membrane protein YebE, DUF533 family [Function unknown]; Region: YebE; COG2979" /db_xref="CDD:442218" protein_bind 4157975..4157987 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4158143..4160005 /gene="spdH" /locus_tag="PA3713" /db_xref="GeneID:880404" CDS 4158143..4160005 /gene="spdH" /locus_tag="PA3713" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="spermidine dehydrogenase SpdH" /protein_id="NP_252402.1" /db_xref="GeneID:880404" /translation="MTISRRDFLNGVALTIAAGLTPAEILRAAPGGRYYPPALTGLRG SHPGAFEVAHQMGWEKKTFDVDHLPIEEEYDLVVVGGGISGLAAAWFYRERHPAARIL VIENHDDFGGHAKRNEFQAGGRTILGYGGSESLQSPNALYSEDAKHLLKRLGVELKRF ETAFDTDFYPGLGLSRAVFFDKASFGVDKLVSGDPTPMVADEVPRDRLNARSWRAFIG DFPLSREDREALIALYESPRDYLAGKSVEEKETYLAKTSYRDYLLKNVGLSETSVKYF QGRSNDFSALGADALPAADAYAAGFPGFDALGLPQPSEEAQAEMDEPYIYHFPDGNAS LARLMVRDLIPAVAPGRGMEDIVMARFDYSKLDLAGHPVRLRLNSTAVSVRNRAGGVD VGYSRAGRLHRVRGKHCVMACYNMMVPYLLRDLSEEQAHALSQNVKFPLVYTKVLLRN WQAWKTLGIHEIYAPTLPYSRIKLDFPVDLGSYRHPRDPRQPIGVHMVYVPTTPNAGM DARTQARVGRSKLYAMSFEQLEKDIRDQLQAMLGPAGFDHRRDITGITVNRWSHGYSY FMNTLYDDEAESEALMELARSKVGNVAIANSDAAWDAYAHAAIDQAVRAVRELG" misc_feature 4158149..>4158355 /gene="spdH" /locus_tag="PA3713" /note="trimethylamine-N-oxide reductase TorA; Region: PRK15102" /db_xref="CDD:237909" misc_feature 4158356..4159843 /gene="spdH" /locus_tag="PA3713" /note="Monoamine oxidase [Amino acid transport and metabolism]; Region: YobN; COG1231" /db_xref="CDD:440844" misc_feature 4158374..4158532 /gene="spdH" /locus_tag="PA3713" /note="NAD(P)-binding Rossmann-like domain; Region: NAD_binding_8; pfam13450" /db_xref="CDD:433218" gene 4160329..4160970 /locus_tag="PA3714" /db_xref="GeneID:880344" CDS 4160329..4160970 /locus_tag="PA3714" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_252403.1" /db_xref="GeneID:880344" /translation="MKTRVILVDDHALTLIGMRYLLSAYDDLRIVAQAQDADGLLAQL EAHPCDLLITDLMMPGSQQADGLRLVQKVRRRYPDLPIIVVTMLGNPALVSSLLKLGI HGLVSKRGMLDDLPKAIRHAGRRPFISRSIAHLLEVGEAEHGKPLASLEQLTPREVEV LRLYGSGLAVGEIAIRLCRSKQTISAQKSSAMRKLGLDSNAGLFIYIRENGLA" misc_feature 4160341..4160949 /locus_tag="PA3714" /note="transcriptional regulator RcsB; Provisional; Region: PRK10840" /db_xref="CDD:182771" gene 4161091..4161894 /locus_tag="PA3715" /db_xref="GeneID:880345" CDS 4161091..4161894 /locus_tag="PA3715" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252404.1" /db_xref="GeneID:880345" /translation="MDRNRRLSARLCLLLLGLASQAEAREPQPCASRLLDAVARQVGH DGWIAPSYESSGPFLAVACKPWPDDPAQTVIAMAYLDPGDTAVEGERHPHLLLAKADS RSGRLLERYDSDFEEDASVAVGSDSLWLDTARYRLSPTVRAFGVVFHSVARGASCPEA GFDNLLTLVVPAGEGKLRPVLNTYLDQWRTLKGSVCSAEPGFEQEVSHLTLELGRGRS NGFADLVITSRVSDGETENGKPLRTVKRTLRYDGERYPFEEYSDFWHRQ" gene complement(4161973..4163679) /locus_tag="PA3716" /db_xref="GeneID:880385" CDS complement(4161973..4163679) /locus_tag="PA3716" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252405.1" /db_xref="GeneID:880385" /translation="MQRLSRIGRNTLAVSVSTLLLSACNQGDDAPKPAAVAPQPAAPS MAALSIPLCLNGQCAVIDQDAKLLVPFDNDYDNIVASAYQGTLMAAREERWNLIQAKD GKVLRDDIGEALSLLTPNLYGFVRDGKYGVVDGQGKEVQAPRFDDIYPNSANEFIIYE IDGKRGILDAKGKQLTEALYDTTLVNGSVAEHGGLISAERGEEKWIINLATGEQKAVA YESLGDLHDGVMSASVIGKGSQLVDAKGDVVGDGKSYDYLGTPANGLVAFREKYDSPC GYLDYQGKVAIAAQFAGCGAFGKQGGLAQQRMEDGSSGKYGLIDRSGAWKVQPQYDSA DSAGLTALGYTVDVPGLAAVGVSTGLFSADFGIFNLDEGSEWVKPGYAQIGALGNDLF VVAKKGGPQKTVSFMGSESQVPVVGLMDRSGKMLLEPDELISIQSAYDGRFLEGLDGM DNAAHTVLLDRQGRTLVPALWQKLEVNPQQGYILGYEVSGTGDEATETLRALYDLNGK PRFTVATTDCGAEQLLDGNGKAIWPQDPTPYCQSDDEQDDEGEPEQEPAPVEESEETS ES" misc_feature complement(4163188..4163292) /locus_tag="PA3716" /note="WG containing repeat; Region: WG_beta_rep; pfam14903" /db_xref="CDD:464361" gene 4163890..4164231 /locus_tag="PA3717" /db_xref="GeneID:880386" CDS 4163890..4164231 /locus_tag="PA3717" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="FkbP-type peptidyl-prolyl cis-trans isomerase" /protein_id="NP_252406.1" /db_xref="GeneID:880386" /translation="MNDRLQIEDLLLGDGKEVVKGALITTQYKGTLEDGTLFDSSYER GRPFQCVIGTGRVIKGWDQGLMGMKVGGKRRLFVPSHLAYGERQVGAHIKPHSNLLFE IELLEVLTRDD" misc_feature 4163902..4164213 /locus_tag="PA3717" /note="FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]; Region: FkpA; COG0545" /db_xref="CDD:440311" gene complement(4164330..4165571) /locus_tag="PA3718" /db_xref="GeneID:880375" CDS complement(4164330..4165571) /locus_tag="PA3718" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_252407.1" /db_xref="GeneID:880375" /translation="MDSPSTLARPHPQASPRWLAVANVIFAGIAAALHVGKATIALPS LQRSFGGDLAALSWIMSAFPFVGVFGGIAAGLLVRRWGDRRLLTGGLAILGGASLLGA SMQDFTWLLATRFVEGLGFLIVVVAAPAVLHRITSETRRSVVFGLWSTFMAGGIALSM LFGPLLADWRADWQLSALLVLVAALLLPLSVPADDGCRAAGVRPAGLGTLLKVPAITL LALGFTTYNLQFFALMTFLPVFLMQRLGVALETAGLIGAAIVAANALGNVAAGFILSR GIRPGALLASTAILMGLTGAAFFHAAMPGLLAIALGFVFSAVAGMLPTTVLATAPLAS PAPSLTPLAIGWVMQGNYLGQVIGPLLIGLIVSRFDWSGAIGLMLVAGAAGAVLGFCL LRALDGLPRAIATGSAARPAD" misc_feature complement(4164387..4165565) /locus_tag="PA3718" /note="Cyanate permease [Inorganic ion transport and metabolism]; Region: CynX; COG2807" /db_xref="CDD:442057" gene complement(4165719..4165880) /gene="armR" /locus_tag="PA3719" /db_xref="GeneID:880376" /db_xref="PseudoCap:PA3719" CDS complement(4165719..4165880) /gene="armR" /locus_tag="PA3719" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="MexR antirepressor ArmR" /protein_id="NP_252408.1" /db_xref="GeneID:880376" /db_xref="PseudoCap:PA3719" /translation="MSLNTPRNKPSRTETEAVAASSGRSAVGRRDYTEQLRRAARRNA WDLYGEHFY" gene complement(4165888..4166313) /locus_tag="PA3720" /db_xref="GeneID:880361" CDS complement(4165888..4166313) /locus_tag="PA3720" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252409.2" /db_xref="GeneID:880361" /translation="MNAPAKSLLDIDAFPLVQVREMPRELADVERWLEEVEALLAVER DFALVYPPLPQETAEGDQQARKRLVLWLKENRQRFVEHCRGILLSANGQPDNLADLQQ LAPVLQAVYGPPVSVAPDLASARGMAKALLSGPATGMNW" gene 4166518..4167159 /gene="nalC" /locus_tag="PA3721" /db_xref="GeneID:880362" /db_xref="PseudoCap:PA3721" CDS 4166518..4167159 /gene="nalC" /locus_tag="PA3721" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252410.1" /db_xref="GeneID:880362" /db_xref="PseudoCap:PA3721" /translation="MNDASPRLTERGRQRRRAMLDAATQAFLEHGFEGTTLDMVIERA GGSRGTLYSSFGGKEGLFAAVIAHMIGEIFDDSADQPRPAATLSATLEHFGRRFLTSL LDPRCQSLYRLVVAESPRFPAIGKSFYEQGPQQSYLLLSERLAAVAPHMDEETLYAVA CQFLEMLKADLFLKALSVADFQPTMALLETRLKLSVDIIACYLEHLSQSPAQG" misc_feature 4166542..4167018 /gene="nalC" /locus_tag="PA3721" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene complement(4167172..4167522) /locus_tag="PA3722" /db_xref="GeneID:880372" CDS complement(4167172..4167522) /locus_tag="PA3722" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252411.1" /db_xref="GeneID:880372" /translation="MHANAGSPHASLPDSDVALLANILVLATRNMNNMTTMLAHLSVE LSQSEEPRLQRVGHRVLNELSELGAALETQWDLIGALARFSPLLERTLPRQEPLVTEI HLTELPGQALPPSA" protein_bind 4167578..4167590 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3722" /bound_moiety="AmrZ" gene complement(4167711..4168817) /locus_tag="PA3723" /db_xref="GeneID:880373" CDS complement(4167711..4168817) /locus_tag="PA3723" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="FMN oxidoreductase" /protein_id="NP_252412.1" /db_xref="GeneID:880373" /translation="MSLLFEPLSLRQITLPNRIAVSPMCQYSAQEGLANDWHLVHLGS RAVGGAGLVIVEATAVLPEGRITADDLGIWSDAHVEPLHRITRFIESQGAVAGVQLAH AGRKASTWRPWLGKHGSVPIGDGGWIPVAPSAIPFDPQHTTPEALSEAQIEALVQAFV RAAERSLAAGFKVAEVHAAHGYLLHQFLSPLSNQRRDQYGGCFENRIRLLLQVTAAVR KAWPQELPLFVRLSATDWVEDGWNPDETVELARHLKDLGVDLIDVSSGGTAANAEIPV GPGYQTEFAERVKKEAGIASGTVGMITEPVQAEHILRTGQADLILLARELLRDPYWPL HAADELRNEQMPWPPQYLRAAHRSTPPRKSLEMQ" misc_feature complement(4167801..4168808) /locus_tag="PA3723" /note="Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing...; Region: OYE_YqiM_FMN; cd02932" /db_xref="CDD:239242" misc_feature complement(order(4167834..4167836,4167843..4167851, 4167855..4167857,4167915..4167920,4167975..4167977, 4168026..4168028,4168128..4168130,4168272..4168274, 4168278..4168280,4168287..4168289,4168521..4168523, 4168647..4168649,4168737..4168739,4168743..4168745, 4168749..4168754)) /locus_tag="PA3723" /note="active site" /db_xref="CDD:239242" misc_feature complement(order(4167834..4167836,4167843..4167851, 4167855..4167857,4167915..4167920,4167975..4167977, 4168026..4168028,4168128..4168130,4168278..4168280, 4168287..4168289,4168521..4168523,4168647..4168649, 4168743..4168745,4168749..4168754)) /locus_tag="PA3723" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:239242" misc_feature complement(order(4168272..4168274,4168278..4168280, 4168287..4168289,4168737..4168739,4168743..4168745)) /locus_tag="PA3723" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:239242" misc_feature complement(order(4167825..4167830,4167897..4167899, 4167915..4167917,4167972..4167974,4167978..4167980, 4168677..4168679,4168689..4168691,4168698..4168703, 4168707..4168712,4168740..4168742)) /locus_tag="PA3723" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:239242" misc_feature complement(4168272..4168274) /locus_tag="PA3723" /note="catalytic residue [active]" /db_xref="CDD:239242" gene complement(4168987..4170483) /gene="lasB" /locus_tag="PA3724" /db_xref="GeneID:880368" CDS complement(4168987..4170483) /gene="lasB" /locus_tag="PA3724" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="elastase LasB" /protein_id="NP_252413.1" /db_xref="GeneID:880368" /translation="MKKVSTLDLLFVAIMGVSPAAFAADLIDVSKLPSKAAQGAPGPV TLQAAVGAGGADELKAIRSTTLPNGKQVTRYEQFHNGVRVVGEAITEVKGPGKSVAAQ RSGHFVANIAADLPGSTTAAVSAEQVLAQAKSLKAQGRKTENDKVELVIRLGENNIAQ LVYNVSYLIPGEGLSRPHFVIDAKTGEVLDQWEGLAHAEAGGPGGNQKIGKYTYGSDY GPLIVNDRCEMDDGNVITVDMNSSTDDSKTTPFRFACPTNTYKQVNGAYSPLNDAHFF GGVVFKLYRDWFGTSPLTHKLYMKVHYGRSVENAYWDGTAMLFGDGATMFYPLVSLDV AAHEVSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAEFYMRGKNDFLIGYDIKKGSG ALRYMDQPSRDGRSIDNASQYYNGIDVHHSSGVYNRAFYLLANSPGWDTRKAFEVFVD ANRYYWTATSNYNSGACGVIRSAQNRNYSAADVTRAFSTVGVTCPSAL" misc_feature complement(4168996..4170483) /gene="lasB" /locus_tag="PA3724" /note="Zn-dependent metalloprotease (Neutral protease B) [Posttranslational modification, protein turnover, chaperones]; Region: LasB; COG3227" /db_xref="CDD:442460" protein_bind complement(4170657..4170676) /experiment="Beta-gal reporter assay [PMID: 8576049]" /experiment="Site directed mutagenesis [PMID: 8576049]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA3724" /bound_moiety="LasR" protein_bind complement(4170718..4170736) /experiment="Beta-gal reporter assay [PMID: 8576049]" /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /experiment="Site directed mutagenesis [PMID: 8576049]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA3724" /bound_moiety="LasR" gene complement(4170770..4172485) /gene="recJ" /locus_tag="PA3725" /db_xref="GeneID:880369" CDS complement(4170770..4172485) /gene="recJ" /locus_tag="PA3725" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="single-stranded-DNA-specific exonuclease RecJ" /protein_id="NP_252414.1" /db_xref="GeneID:880369" /translation="MRIEPRPLPETLPDLGDLPPLLARLYAARGVRCAEELDKGLARL IPYQRLKGIEEGVALLVDALEGGQRILIVGDFDADGATASSVGVLALRMLGAAWVDYL VPNRFEYGYGLTPEIVGVALEKRPDLLVTVDNGISSVDGVQAAKAAGLKVLVTDHHLP GPELPAADAIINPNQPGCEFPSKAMAGVGVIFYVMLALRARLRELDWFARRGLKEPNL AELLDLVALGSVADVVPLDANNRILVHQGLARIRAGRARPGLRALLEVAGRPPVRITS TDLGFILGPRLNAAGRLDDMSLGIECLLCDDEALARDMAVQLDQLNQDRKAIEQGMQR EALAQLKELSLEQLPFGLCLFDADWHQGVIGILASRLKERYHRPTIAFADAGDGSLKG SARSIPGFHIRDALDAVAARHPGLISKFGGHAMAAGLSLPQENFGAFSAAFDAEVRRQ LAEEDLAGRLLSDGQLSIQEFHLELARALRQAGPWGQHFPEPMFHGVFQLVQQRIVGE RHLKLVLKSECGSLQLDGIAFNIDREQWPNPTVRWAELAYKLDVNEFRGQESVQLMIV HMAPR" misc_feature complement(4170773..4172482) /gene="recJ" /locus_tag="PA3725" /note="single-stranded-DNA-specific exonuclease RecJ; Region: PRK11070" /db_xref="CDD:182944" gene complement(4172529..4173068) /locus_tag="PA3726" /db_xref="GeneID:880374" CDS complement(4172529..4173068) /locus_tag="PA3726" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252415.1" /db_xref="GeneID:880374" /translation="MALQSTPYKADISLTDLDRGVYETLRLTVARHPSETEERLAVRL LAYVLWYGEQIAFGRGLSDVDEPALWEKSLDGRVLHWIEVGQPDAERITWCSRRCERF SLLAYGNLRVWQTKVLDSVRSLKNINVAAVPQEPLESLSRDLPRSINWTVMISEGTLF VTDENGQHELQLEWLQGER" misc_feature complement(4172532..4173065) /locus_tag="PA3726" /note="Uncharacterized conserved protein YaeQ, suppresses RfaH defect [Function unknown]; Region: YaeQ; COG4681" /db_xref="CDD:443717" gene complement(4173175..4173867) /locus_tag="PA3727" /db_xref="GeneID:880348" CDS complement(4173175..4173867) /locus_tag="PA3727" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252416.1" /db_xref="GeneID:880348" /translation="MDFDGLDRQLRDSLADLKLSNEERDELRQLGSELAPDQVRFLRN RAFDLVRELVLLEEQGERIAALKWLEQVVRTLEVTAAPPRSRASAYFSPGEECRRKIR ELCRQARQSLDICVFTISDDQLSAEILACHRRGVPVRIISDDDKQFDEGSDIHALREA GVPLRIDDSPFHMHHKFALVDGAWLLNGSFNWTRSASVNNEENLLVTDDAVLIGAYRR EFEELWGRYAPR" misc_feature complement(4173196..4173603) /locus_tag="PA3727" /note="Catalytic domain of vertebrate phospholipase D6 and similar proteins; Region: PLDc_vPLD6_like; cd09171" /db_xref="CDD:197268" misc_feature complement(order(4173262..4173264,4173295..4173297, 4173301..4173303,4173340..4173342,4173346..4173348)) /locus_tag="PA3727" /note="putative active site [active]" /db_xref="CDD:197268" misc_feature complement(4173346..4173348) /locus_tag="PA3727" /note="catalytic site [active]" /db_xref="CDD:197268" gene complement(4173886..4179126) /locus_tag="PA3728" /db_xref="GeneID:880349" CDS complement(4173886..4179126) /locus_tag="PA3728" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252417.1" /db_xref="GeneID:880349" /translation="MSDTQAATPAQDVLDKAVAEGGAYEVLHKRLLEQGQRLRQTAER LNASRLEEFGDSQMDVIGRVRIRTENNCIARDIVQVGDCLLFGYNVFIGLRKETGVAD VFSLYRLVEGSEGYEAEPVPLGDSFLAAPGFVNDFNELYTYYKNTRLLQLAIRDGKLL ASFQIGERITDIRVFRWSISSDGSEVRYIDNRGERDIALPAPFDFEWQRATREMVVEG RFPHLNILDTLFVETIGGDLTIKVENNTEVGLGIYREEVMDKTQSLDDAQVEFARLGS LLLLKVLPYREEQWRYLVFNSLTGKVERIDAIGLACIQLPEDHGIIFPGGYYLQNGEY RTFEQSMEGMRFKRSVRSPNGEDVQYVFYHPEQGRNVLLTYNLINRQLQNPLFGHGYA RLEDGRMVIFAAEGEEPTRIHPMQVWQTPFCTEEYAARQPARSGFLGRIGNAELVRGV SDLYDLCREIETPAVSIQRYSLLCQNTQRLFDVYHWLGSDQLDGLAPLLREVAATAEL VLDEYEKVESIRRQSAQAMIDAEERHKALLSGLLPDGWDRVQQFVDGLNGITAQRGSL LTIREYRYIDVARLDAMEAELLAAHERVAAATATFLASEQALQPLLERLQSLDGEAQK AETVAQLGEPLAALEAMAGDLDMLSSLMASLRIDDATQRTRIIESISEIYARLNQAKA RAEQRRKGLGSSETVAQFGAQFKLFGQGITNALAQAQDPERCDEQLSRLLVQLEELES QFGDHEQFLGDILAKREELLETFEAHKQTLLDERQRKAQGLLDAARRILDSLQRRTAR FTQAEELNAFFAADPLILKLRELAERLRELKDSVKADDVEARLKAARDQAVRALRDKS ELFEEGGDVIRLGPRHRFSVNTQELDLTLMPRGDALYLHLTGTDFLEPLQDPRLDELR EFWQVNLESESETLYRAEYLAGEVLAAADAGRDGFSLERLQALLAQPDELARAIRDFA APRYKEGYEKGIHDHDAAAILVRLLPLRESAGLLRYAPSARAFASLFWSRRREEREVA GWPERARSSRSIQQMFGRDDGLLALRGEVAAAMRALLAEQPIALDPQHIDEAAEYLVW ELSAERPEFTFSKYARQLQEGLKLRLQGARLWDDYRQTLERLGERPAAQWELAGNWLR GLCGDAEFQPLAAYLDEAVALSLLDEEMPRRITEVDLRFQVDGLMGEHPRIFERGLAL AVDDFFGRLRRHRQQFLPGLRRYQALRQEIVEHEREALRLAEFKPRPLSSFVRNKLIN DVYLGVIGDNLAKQMGTVGENKRTDLMGLLMLISPPGYGKTTLMEYVAHRLGLIFMKI NGPALGHEVRSLDPGQAPDATSRQELEKLNLALEMGNNVMLYVDDIQHTHPEFLQKFI SLCDGTRRVEGVWKGRTKTYDMRGRKFCVVMAGNPYTESGEVFRIPDMLANRADIYNL GDTLSGMQEAFSLSYIENALTSNPVLAPLATRDMADVYRFVAKAEGKPFSSNELAHGY SGAEINEISSTLQRLMQVRDVVLKVNQQYIASAAQADQYRSEPPFKLQGSYRNMNKMA EKISAVMNDAELLQLIADHYQGESQLLTTGAEENLLKLAELRGNQSPEQAERWAQIKR DFLRNKSMGGSDADVGGRLVAQLNDLVESVRGLAREPQPVQPAPWDELLAGLRQLGQG APALNVEVTAPAQPGVQQVLESLAACLQDSFLPLIKVMDRKIDVDLRTHNRINEISSR LDELGRLLGGEQRPLENDQP" misc_feature complement(4177672..4179015) /locus_tag="PA3728" /note="ATPase involved in DNA repair; Region: DUF3686; pfam12458" /db_xref="CDD:432568" misc_feature complement(<4175722..>4177410) /locus_tag="PA3728" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" misc_feature complement(4174981..4175259) /locus_tag="PA3728" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature complement(4175218..4175241) /locus_tag="PA3728" /note="Walker A motif; other site" /db_xref="CDD:99707" misc_feature complement(order(4175035..4175037,4175215..4175238)) /locus_tag="PA3728" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:99707" misc_feature complement(4175032..4175049) /locus_tag="PA3728" /note="Walker B motif; other site" /db_xref="CDD:99707" gene complement(4179276..4181342) /locus_tag="PA3729" /db_xref="GeneID:880398" CDS complement(4179276..4181342) /locus_tag="PA3729" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252418.1" /db_xref="GeneID:880398" /translation="MDMTSLMPLLLGVGLVVLLVVGLLALFKAFYIKVPQGTALIVND MSSTPKVHFTGALVYPVIHLKEFMRISLITLEVDRRGKDGLICRDNMRADITVAFYLR VNETQDDVLKVAKAIGVDRASDRSAVNELFNAKFSEALKTVGKQFDFVQLFENRQDFR DRIIEVIGNDLNGYVLEDVAIDYLEQTAKNSLDPSNILDAEGIRKITELTATQNVITN ELERNEELAIKKKNVETREAALALERQQADAEARQKREIETIRAREEAETARVKEEER LKAEQARIQAQQEIDVRTENHQREVEVAQQNRQRAVVIEVEKVTRAKDLEIVAREREV ELQKIEKEKALEEQRKNIANVIRERVAVEKTVAQEEERIKEVREVSEAERVKQVILLQ AQAEAEQELVRQVKQAEADEARSKHKAVEINTMAQAELEAASKQAEAKKRLAEGIEAE RAAPGLADARVLEVTAAAKEKDGLAAARVRAEQLIAEARGDEERGLADARVLEAQAAA KEKDGLAEAKVLAEKLGAQARGEEQLGAAKAKATKDQGSAEAEVLLQRLNAEAEGLGK KFGALDALSDSARQHEEFRMQLEKSFEEAMAAIAANKDIAKDQAEVLATALGKANIEI VGGEGDFFNSFAKSLSVGKAIEGVVGKSPVVQDVLARLLNGRGAAAAVMPERKSGHEN EPAAEV" misc_feature complement(4180008..4181270) /locus_tag="PA3729" /note="Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]; Region: YqiK; COG2268" /db_xref="CDD:441869" misc_feature complement(<4179483..>4180400) /locus_tag="PA3729" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" gene complement(4181378..4182019) /locus_tag="PA3730" /db_xref="GeneID:880399" CDS complement(4181378..4182019) /locus_tag="PA3730" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252419.1" /db_xref="GeneID:880399" /translation="MEGFLQTALSFPTVLFSFLLILAIIYWGIVALGMVEIDVLDLDA ESVVDGAGQAEGLAALLAKLKLNGVPVTLVLTLLSFFAWFLCYFVQLWLLSALPLGWL RYPLGAVVAVGALFLAAPLAATLCRPLRPLFRKLESTSSKSVLGQVAVVRSGRVTLQH GEALLEDGGAGLILKVRAEENKGFKRGDRVVLLEYLEAEHAYRVVTEEEFRGI" gene complement(4182075..4182770) /locus_tag="PA3731" /db_xref="GeneID:880302" CDS complement(4182075..4182770) /locus_tag="PA3731" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252420.1" /db_xref="GeneID:880302" /translation="MTVWSKLLSALRGGANEVGEAIVDSQALRILDQEIRDADVELRK SREALASIMARHRLAQERVEKGAAQVAEYEQYAIKALEAGNEELAREVAEKIATLENQ LEGERAQVAEFAASVAQLRKSVSQAEGNIRQLKQQVDTVKATESVQKAQMAVAQRYGN SKSKLQTAVDSLERIKQRQAERAATMDAAAELASAAAPDDALDAKLRAAGIKASGNSV DGVLARLKEKGKA" misc_feature complement(4182090..4182764) /locus_tag="PA3731" /note="PspA/IM30 family; Region: PspA_IM30; pfam04012" /db_xref="CDD:461130" gene complement(4182785..4183405) /locus_tag="PA3732" /db_xref="GeneID:880303" CDS complement(4182785..4183405) /locus_tag="PA3732" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252421.2" /db_xref="GeneID:880303" /translation="MQRKSSAHYQRVFRQRLREQGLVKKEVWILPENAAALAGIERML RRPAAGAAHLEKEEDMTEARVWNARSLAEALSGTELFSSGEAQIELIEGAEASLYVIM REYGDLPVFVAPQGEQIIVEALLWPESDVTDATAFNEEVLLSRQLFPLSSIGLLNLPG EERCYSMFGALSTTSSLASVLHEIETLAGNVIRATEVYAGYLKARA" misc_feature complement(4182800..4183213) /locus_tag="PA3732" /note="Uncharacterized protein conserved in bacteria (DUF2170); Region: DUF2170; pfam09938" /db_xref="CDD:430942" gene 4183710..4184939 /locus_tag="PA3733" /db_xref="GeneID:880326" CDS 4183710..4184939 /locus_tag="PA3733" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252422.1" /db_xref="GeneID:880326" /translation="MRTLQPDGHRMEHSPKPLAGLKVVELGTLIAGPFASRICAEFGA EVIKIESPDGGDPLRKWRKLYEGTSLWWFVQARNKKSLTLNLKHAEGQAILKRLLGDA DILIENFRPGVLEKLGLGWDVLHALNPRLVMVRLSGFGQTGPYKDQPGFGAVGESMGG LRYITGFEDRPPVRTGISIGDSIAALWGVIGALMALRHREVNGGEGQMVDVALYEAIF AMMESMVPEFDVFGFIRERTGNIMPGITPSSIHTSADGRHVQIGANGDAIFRRFMQAI GRDDLASDPRLASNDGRDARRDELYGVIDRWVASQPLEEVLAVLARAEVPASRIYSAE DMFRDPQFLAREMFLSARLPDGKPFRMPGIVPKLSATPGSADWVGPELGEHTDALLAE LGYDSEGIAALRREGAI" misc_feature 4183743..4184936 /locus_tag="PA3733" /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]; Region: CaiB; COG1804" /db_xref="CDD:441409" gene complement(4185125..4185481) /locus_tag="PA3733a" /db_xref="GeneID:17373375" CDS complement(4185125..4185481) /locus_tag="PA3733a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719769.1" /db_xref="GeneID:17373375" /translation="MHRRTLFAFFRSLTSLIRRNRRPDLDSLKQRLADAFAPHPFTLS QPRPDGGRVVTLVDPQGETLLQRVIAKVQLNDESYLEDAVQTIRRELQVLVGRMEEDV LATFRERDHVLLYSSR" misc_feature complement(4185140..4185403) /locus_tag="PA3733a" /note="Protein of unknown function (DUF3509); Region: DUF3509; pfam12021" /db_xref="CDD:432267" gene 4185522..4186727 /locus_tag="PA3734" /db_xref="GeneID:880327" CDS 4185522..4186727 /locus_tag="PA3734" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252423.1" /db_xref="GeneID:880327" /translation="MPAQIAIRAEPGQRNDQPAIREAPGKTPTIPPSRNAFTCLKLQY PARPSGSNNETSPCASNSEDLMTAFASPRSAWRAFILALAFAAGTAQGSLLFGAVGLA NDQYARPVADTEIASTAVLADCRGFVGTIARIVLLDGSIRCNEAFPYGFASPISTSVY YPADIAASDAKLPVITFVGGILSNAGNYHELMKLWASHGFIVVISSDFINSFPLMHAL GILEVAKLDRDPASALHGRADFSRTLVAGHSAGGQATLQSASLSAQALQLIEPRLKLV GALPIEPGPLAIGSTVKTPTLLLTGLADVVVPPLSWPILWQGPLIRDVPAWGATATTA THFSPLRQIEYNEFAGISVAWVLYQGKNDAQARDYFVGRYYKLASDIQFNDPLRLLRP SRNKLAAAL" misc_feature 4185981..>4186457 /locus_tag="PA3734" /note="Predicted dienelactone hydrolase [General function prediction only]; Region: COG4188" /db_xref="CDD:443342" gene complement(4186781..4188190) /gene="thrC" /locus_tag="PA3735" /db_xref="GeneID:880336" CDS complement(4186781..4188190) /gene="thrC" /locus_tag="PA3735" /EC_number="4.2.3.1" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="threonine synthase" /protein_id="NP_252424.1" /db_xref="GeneID:880336" /translation="MRYISTRGQAPALNFEDVLLAGLASDGGLYVPENLPRFTLEEIA SWVGLPYHELAFRVMRPFVAGSIADADFKKILEETYGVFAHDAVAPLRQLNGNEWVLE LFHGPTLAFKDFALQLLGRLLDHVLAKRGERVVIMGATSGDTGSAAIEGCRRCDNVDI FIMHPHNRVSEVQRRQMTTILGDNIHNIAIEGNFDDCQEMVKASFADQGFLKGTRLVA VNSINWARIMAQIVYYFHAALQLGAPHRSVAFSVPTGNFGDIFAGYLARNMGLPVSQL IVATNRNDILHRFMSGNRYDKDTLHPSLSPSMDIMVSSNFERLLFDLHGRNGKAVAEL LDAFKASGKLSVEDQRWTEARKLFDSLAVSDEQTCETIAEVYRSSGELLDPHTAIGVR AARECRRSLSVPMVTLGTAHPVKFPEAVEKAGIGQAPALPAHLADLFEREERCTVLPN ELAKVQAFVSQHGNRGKPL" misc_feature complement(4186817..4188187) /gene="thrC" /locus_tag="PA3735" /note="Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria; Region: Thr-synth_2; cd01560" /db_xref="CDD:107203" misc_feature complement(order(4186961..4186963,4187423..4187428, 4187855..4187857)) /gene="thrC" /locus_tag="PA3735" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:107203" misc_feature complement(4187855..4187857) /gene="thrC" /locus_tag="PA3735" /note="catalytic residue [active]" /db_xref="CDD:107203" gene complement(4188243..4189547) /gene="hom" /locus_tag="PA3736" /db_xref="GeneID:880337" CDS complement(4188243..4189547) /gene="hom" /locus_tag="PA3736" /EC_number="1.1.1.3" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="homoserine dehydrogenase" /protein_id="NP_252425.1" /db_xref="GeneID:880337" /translation="MKPVKVGICGLGTVGGGTFNVLERNAEEIARRAGRGIEVAQIAA RRPNPKCDTGATPITADIFDVACNPEIDVVVELIGGYTLAHELVLKAIENGKHVVTAN KALIAVHGNEIFAKAREKGVIVAFEAAVAGGIPVIKAIREGLSANRINWLAGIINGTG NFILSEMREKGRTFPDVLAEAQALGYAEADPTFDVEGIDAAHKLTILASIAFGIPLQF DKAYTEGISKLTSADVNYADALGYRIKHLGVARRTESGFELRVHPTLIPSDRLIANVN GVMNAVMVNGDAVGSTLYYGAGAGMEPTASSVVADLVDVVRAMTSDPENRVPHLAFQP DALSDHPILPIEACESAYYLRIQAKDHPGVLAQVATILSERGINIESIMQKEAEEQDG LVPMILVTHRVIEQRINDAIAALEALEGVSGPVVRIRVEQLN" misc_feature complement(4188255..4189547) /gene="hom" /locus_tag="PA3736" /note="homoserine dehydrogenase; Provisional; Region: PRK06349" /db_xref="CDD:235783" gene complement(4189761..4190489) /gene="dsbC" /locus_tag="PA3737" /db_xref="GeneID:880330" CDS complement(4189761..4190489) /gene="dsbC" /locus_tag="PA3737" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="thiol:disulfide interchange protein DsbC" /protein_id="NP_252426.1" /db_xref="GeneID:880330" /translation="MRVTRFLAAAALGLMSTLALADNADQNIRKTLQALQPDLPIDSI ASSPLQGLYQVQLKGGRVLYASADGQFVMQGYLYQVKDGKPVNLTEKAESQAIAKAIN GVPASEMVVYPAKGQAKAHITVFTDTTCPYCQKLHAEVPDLTEQGIEVRYMAFPRQGP QSAGDKQLQAVWCAKEPTKAMDAMMNGKEIKSSECKNPVDKQFQMGQMVGVQGTPAIV LANGQLLPGYQPAKQLAKLALEAK" misc_feature complement(4189779..4190489) /gene="dsbC" /locus_tag="PA3737" /note="The thioredoxin (TRX)-like superfamily is a large, diverse group of proteins containing a TRX fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox...; Region: Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; cl00388" /db_xref="CDD:469754" misc_feature complement(order(4190256..4190306,4190310..4190342, 4190349..4190375)) /gene="dsbC" /locus_tag="PA3737" /note="dimerization domain [polypeptide binding]; other site" /db_xref="CDD:239318" misc_feature complement(4190256..4190279) /gene="dsbC" /locus_tag="PA3737" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:239318" misc_feature complement(order(4190091..4190093,4190100..4190102)) /gene="dsbC" /locus_tag="PA3737" /note="catalytic residues [active]" /db_xref="CDD:239318" gene complement(4190616..4191512) /gene="xerD" /locus_tag="PA3738" /db_xref="GeneID:880331" CDS complement(4190616..4191512) /gene="xerD" /locus_tag="PA3738" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="site-specific tyrosine recombinase XerD" /protein_id="NP_252427.1" /db_xref="GeneID:880331" /translation="MSTLEHPLIDRFLDALWLEKGLADNTREAYRNDLQQFNAWLDGR GLRLEGIGRDAILDHLAWRLEQGYKARSTARFLSGLRGFYRYCLRDGLIAEDPTLQVD LPQLGKPLPKSLSEADVEALLAAPEVDDPLGLRDRTMLEVLYACGLRVSELVGLTLEQ VNLRQGVVKVFGKGSKERLVPLGEEAIGWLERYLREARGDLLGGRPSDVLFPSLRGEQ MTRQTFWHRIKHHAQVAAIGTSISPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTT QIYTHIARARLQDLHARHHPRG" misc_feature complement(4190619..4191512) /gene="xerD" /locus_tag="PA3738" /note="tyrosine recombinase; Region: xerD; PRK00283" /db_xref="CDD:234713" misc_feature complement(order(4190676..4190678,4190769..4190774, 4190781..4190783,4191066..4191068)) /gene="xerD" /locus_tag="PA3738" /note="active site" /db_xref="CDD:271179" gene 4191727..4193562 /locus_tag="PA3739" /db_xref="GeneID:880319" CDS 4191727..4193562 /locus_tag="PA3739" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sodium/hydrogen antiporter" /protein_id="NP_252428.1" /db_xref="GeneID:880319" /translation="MDQNAILLALGGIGAAALLSQWLAWRLRLPAILFLLLSGIVAGP LLGWLDPDEMFGPLLFPLVSLAVALILFEGSLTLHFSEWKEIGTVVHRMVTIGALSTW GVIALAAHYLLDFSWEMALLFGTLTLVTGPTVIVPMLRVVRPKAAVANILRWEGIVID PIGALLAVVVYSFIISSGEGDGWLHSLQTFGGVILCGSLFGILGGWALGIVLRRHWLP DYLHNLATLAAVLGVFIASNRVMHESGLLAVTLMGMGLANMKGVDVRQILHFKENLSV LLISGLFILLAARLDINALLGLGPAALLVLLLIQFVARPLNVALSTWGSPLSWRERAL LSWIAPRGIVAAAVSAIFAIRLSAEGHAQAALLVPLTFLVIIGTVVLQSATARPLARL LKVAEPSPSGYLIVGANPVGRAIGKALKSLGSRVLLTDSSWENIRAARMDNLPTYFGN PTSQHAEAHLDLVGIGHLLGVSPAGELNTLAAMRFRHEFGHRQLFGLPTSQEAKRTDK HRSSDEHRGRPLGQRPLTYAQFASLLSRGAEIRTTLLTDTFGWNDYQALHGESAILLF ARDPNGRMHVATPQSTLAPGTGWTLLSLIDAEPSVSKSQATEIAD" misc_feature 4191742..4193268 /locus_tag="PA3739" /note="NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism]; Region: NhaP; COG0025" /db_xref="CDD:439796" gene 4193675..4194361 /locus_tag="PA3740" /db_xref="GeneID:880320" CDS 4193675..4194361 /locus_tag="PA3740" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252429.1" /db_xref="GeneID:880320" /translation="MTMSNQQHSRLGQILINKGLISAAQLDAAIQAQLSNHKRLGETL IEQGLLSERQLKKALKKQTNLRLAATLVAALLSPFQMASADIQRMQPPAAMSRQELPK NLRPLTDVEMSNVNAQGLNESLEGLFLKAEGGDGLAAVKQLAKLVMPMLDSLEAETSM SDVRYETGKTQSTLNPDGSVNLRLPSSIGEVRFDNIRIAGAPREQTFGSVSLQQIDLS QASLKISLRP" misc_feature <4193684..>4193860 /locus_tag="PA3740" /note="phage adsorption protein NrfB; Region: nfrB; PRK11234" /db_xref="CDD:236884" gene complement(4194431..4194856) /locus_tag="PA3741" /db_xref="GeneID:880338" CDS complement(4194431..4194856) /locus_tag="PA3741" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="acyl-CoA thioesterase" /protein_id="NP_252430.1" /db_xref="GeneID:880338" /translation="MTPREQEILRRTELSETRVTKAVFPPTTNHHNTLFGGTALAWMD EVSFITATRFCRLPLVTVSTDRIDFNHPIPAGSIVELVGRVVKVGNTSLKVEVEVYLE SMYADGREKAIHGLFSFVAIDDEKRPVPVLPGFPASQAA" misc_feature complement(4194443..4194814) /locus_tag="PA3741" /note="Acyl-CoA hydrolase [Lipid transport and metabolism]; Region: YciA; COG1607" /db_xref="CDD:441215" gene complement(4195008..4195358) /gene="rplS" /locus_tag="PA3742" /db_xref="GeneID:880339" CDS complement(4195008..4195358) /gene="rplS" /locus_tag="PA3742" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L19" /protein_id="NP_252431.1" /db_xref="GeneID:880339" /translation="MTNKIIQQIEAEQMNKEIPAFAPGDTVIVQVKVKEGDRQRLQAF EGVVIAKRNRGLNSAFTVRKISNGVGVERTFQTYSPIVDSLSVKRRGDVRKAKLYYLR ALSGKAARIKEKLV" misc_feature complement(4195011..4195352) /gene="rplS" /locus_tag="PA3742" /note="50S ribosomal protein L19; Provisional; Region: rplS; PRK05338" /db_xref="CDD:235418" gene complement(4195400..4196158) /gene="trmD" /locus_tag="PA3743" /db_xref="GeneID:880357" CDS complement(4195400..4196158) /gene="trmD" /locus_tag="PA3743" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tRNA (guanine-N(1)-)-methyltransferase" /protein_id="NP_252432.1" /db_xref="GeneID:880357" /translation="MDKRLWVGVVSIFPEMFRAISDYGITSRAVKQGLLTLTCWNPRD YTEDRHQTVDDRPFGGGPGMVMKIKPLEGALADARQAAGGRKAKVIYLSPQGRQLTQA GVRELAEEEALILIAGRYEGIDERFIEEHVDEEWSIGDYVLSGGELPAMVLVDAVTRL LPGALGHADSAEEDSFTDGLLDCPHYTRPEVYADKRVPEVLLSGNHEHIRRWRLQQAL GRTWERRADLLDSRSLSGEEQKLLAEYIRQRDDS" misc_feature complement(4195415..4196143) /gene="trmD" /locus_tag="PA3743" /note="tRNA G37 N-methylase TrmD [Translation, ribosomal structure and biogenesis]; Region: TrmD; COG0336" /db_xref="CDD:440105" gene complement(4196165..4196692) /gene="rimM" /locus_tag="PA3744" /db_xref="GeneID:880358" CDS complement(4196165..4196692) /gene="rimM" /locus_tag="PA3744" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribosome maturation factor RimM" /protein_id="NP_252433.1" /db_xref="GeneID:880358" /translation="MPTPADDLVVIGKIVSVYGIRGEVKVYSFTDPLDNLLDYRRWTL RRDGEIRQAELVRGRLHGKVLAAKLKGLDDREEARTFTGYEICIPRSELPSLEEGEYY WHQLEGLKVIDQGRQLLGVIDHLLETGANDVMVVKPCAGSLDDRERLLPYTGQCVLSI DLAAGEMRVDWDADF" misc_feature complement(4196168..4196689) /gene="rimM" /locus_tag="PA3744" /note="16S rRNA-processing protein RimM; Provisional; Region: rimM; PRK00122" /db_xref="CDD:234650" gene complement(4196708..4196959) /gene="rpsP" /locus_tag="PA3745" /db_xref="GeneID:880510" CDS complement(4196708..4196959) /gene="rpsP" /locus_tag="PA3745" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S16" /protein_id="NP_252434.1" /db_xref="GeneID:880510" /translation="MVTIRLARGGSKKRPFYHLTVTNSRNARDGRFVERIGFFNPVAT GGEVRLSVDQERATYWLGQGAQPSERVAQLLKDAAKANA" misc_feature complement(4196726..4196959) /gene="rpsP" /locus_tag="PA3745" /note="Ribosomal protein S16 [Translation, ribosomal structure and biogenesis]; Region: RpsP; COG0228" /db_xref="CDD:439998" gene complement(4197169..4198542) /gene="ffh" /locus_tag="PA3746" /db_xref="GeneID:880310" CDS complement(4197169..4198542) /gene="ffh" /locus_tag="PA3746" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="signal recognition particle protein Ffh" /protein_id="NP_252435.1" /db_xref="GeneID:880310" /translation="MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVA LPVVKDFVNKVKERAVGTEVSKSLTPGQAFVKIVRAELEELMGAANEDLALSVAPPAV ILMAGLQGAGKTTTAGKLARFLKERKKKSVMVVSADVYRPAAIKQLETLAGEVGVTFF PSDVSQKPVAIAEAAIREARLKFIDVVIVDTAGRLHIDADMMDEIKQVHAAIKPAETL FVVDAMTGQDAANTAKAFNDALPLTGVVLTKVDGDARGGAALSVRAITGKPIKFLGMG EKSEALDPFHPDRVASRILGMGDVLSLIEQAEQNLDRDKAEKLAKKIKKGKGFDLEDF RDQLQQMKNMGGLGGLMDKLPMLGGVNLAQMGNAQGAAEKQFKQMEAIINSMTPGERR DPEMISGSRKRRIALGSGTQVQDVGRLIKQHKQMQKMMKKVTAKGGMAKMMRGMGSMF PGGMPKL" misc_feature complement(4197259..4198542) /gene="ffh" /locus_tag="PA3746" /note="Signal recognition particle GTPase [Intracellular trafficking, secretion, and vesicular transport]; Region: Ffh; COG0541" /db_xref="CDD:440307" gene 4198843..4199643 /locus_tag="PA3747" /db_xref="GeneID:880311" CDS 4198843..4199643 /locus_tag="PA3747" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252436.1" /db_xref="GeneID:880311" /translation="MHPLLPSLIAAVLYLGTAAYQGACVSKRTAPGKPLLLLFGLLAL VAHAFSLYQQLLTPAGLVLDFFNAASLIAAAVILLTLLATLRIPVENLLLLLFPLGAL TTLLAVLIPHGTVEPINEQPGILAHILLSILAYGLLTIAVFQALLLLLQDYRLKHKHP SGLIRNFPPLQTMESLLFGFLWGGWSLLSLSLLSGWLFVDNLFAQHLAHKTILSCFAW VVFAVLLWGRHQLGWRGHKAIRWTLAGFCLLMLAYFGSKLVREFILHI" misc_feature 4198843..4199637 /locus_tag="PA3747" /note="ABC-type uncharacterized transport system, permease component [General function prediction only]; Region: YpjD; COG4137" /db_xref="CDD:443312" gene 4199656..4200948 /locus_tag="PA3748" /db_xref="GeneID:880304" CDS 4199656..4200948 /locus_tag="PA3748" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252437.1" /db_xref="GeneID:880304" /translation="MDELHPGYLVGLLVLLVACSAFFSCVETALLNLDRYRLRLQAKQ GLRGARRSSWLLLHDDRLRGTLLFGRTLVNVSAAALASWAALRHWGVIGLAVAIPGMT LLLLLFGALLPRRYGALRSERVALPLSLPLLILQRLCWPLLWLLTLLSNALLRLLGVA AAEQDDSGRSRDEEALHPADNPQASEVNRHDMLLGLLDLEKVTVNDLMIPRNEIEGID LDDELEVIVEQLRTTSHTRLPVYRDDVNQIEGVVHMRQIARLLTQGRLTKENLRQACM EPYFVPESTPLSTQLVNFQKEKRRIGVVVDEYGEVIGIVTLEDILEEIVGDFNDLDSL DNPDIQAQEDGSFVIDGSANLRELNKSLGWQLPCDGPKTLNGLVTEALEQIPDCAVCL RIGPYCLEIQQSAENRVKSVRAWHPRALTPLVESDASV" misc_feature 4199707..4200909 /locus_tag="PA3748" /note="Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains [Inorganic ion transport and metabolism]; Region: CorB; COG4536" /db_xref="CDD:443602" gene 4201252..4202565 /locus_tag="PA3749" /db_xref="GeneID:880305" CDS 4201252..4202565 /locus_tag="PA3749" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_252438.1" /db_xref="GeneID:880305" /translation="MTAATLAADAAPEPANSTTRVAVASFIGTAIEFYDFYVYATAAA LVIGPVFFPQTSGTAQMLSAFLTFGIAFLARPLGSALFGHFGDRIGRKSTLVASLLLM GVSTTLIGVLPGYDSIGYWAPLLLCVLRFGQGLGLGGEWGGAALLATENAPAGKRAWF GMFPQLGPSIGFLAANGLFLALAMLLSEEQFREWGWRIPFLLSAALVVVGLYVRLKLA ETPVFAKAMAKHERVRLPIAELFAQHWRPTLLGALAMVVCYALFYISTVFSLSYGVAS LGFSREEFLGLLCLAVLFMAAATPLSAWLSDRFGRKPVLLLGSLAAIASGFAMEPLLS QGSTFSVALFLCIELFLMGVTFAPMGALLPEIFPTHVRYTGASAAYNLGGILGASVAP YIAQKLVGIGGLGWVGGYVSAAALLSLLAVLCLKETRDNDLGAVS" misc_feature 4201309..4202448 /locus_tag="PA3749" /note="Shikimate transporter and similar proteins of the Major Facilitator Superfamily; Region: MFS_ShiA_like; cd17369" /db_xref="CDD:340927" misc_feature order(4201345..4201350,4201357..4201362,4201369..4201371, 4201486..4201488,4201660..4201665,4201669..4201677, 4201684..4201686,4201744..4201746,4201753..4201758, 4201765..4201767,4202014..4202016,4202023..4202028, 4202035..4202043,4202050..4202052,4202134..4202136, 4202146..4202148,4202302..4202307,4202317..4202319, 4202329..4202331,4202377..4202379,4202386..4202391, 4202398..4202403,4202410..4202412) /locus_tag="PA3749" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340927" gene complement(4202573..4203322) /locus_tag="PA3750" /db_xref="GeneID:880454" CDS complement(4202573..4203322) /locus_tag="PA3750" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252439.1" /db_xref="GeneID:880454" /translation="MRRLATLAWWAAALPLLPLAVPLAIRTRRRALRLAPAAGPREGL VGGSGAEEPLRLLLFGESTVAGVGASCLDYALAGRLAAALGERLRRPVAWQALGENGI TSGEARERLLPQVAGRFFDQVILVFGVNDTTSLRSLERWRADCAALIEGFQAAGAQVT CTAVPPLRHFSALPGLLRALLGWRGRLLDEALRDLAGATGAGYCPISLDLLPGYLAID GFHPSQLGYQVWAGALADWLAAREKGGVAVA" misc_feature complement(4202603..4203169) /locus_tag="PA3750" /note="SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it...; Region: FeeA_FeeB_like; cd01836" /db_xref="CDD:238874" misc_feature complement(order(4202660..4202662,4202669..4202671, 4202933..4202935,4203020..4203022,4203137..4203139)) /locus_tag="PA3750" /note="active site" /db_xref="CDD:238874" misc_feature complement(order(4202660..4202662,4202669..4202671, 4203137..4203139)) /locus_tag="PA3750" /note="catalytic triad [active]" /db_xref="CDD:238874" misc_feature complement(order(4202933..4202935,4203074..4203076, 4203137..4203139)) /locus_tag="PA3750" /note="oxyanion hole [active]" /db_xref="CDD:238874" gene complement(4203324..4204505) /gene="purT" /locus_tag="PA3751" /db_xref="GeneID:880455" CDS complement(4203324..4204505) /gene="purT" /locus_tag="PA3751" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphoribosylglycinamide formyltransferase" /protein_id="NP_252440.1" /db_xref="GeneID:880455" /translation="MTRIGTPLSPSATRVLLCGSGELGKEVAIELQRLGCEVIAVDRY GNAPAMQVAHRSHVISMLDGAALRAVIEQEKPHYIVPEIEAIATATLVELEAEGYTVV PTARAAQLTMNREGIRRLAAEELGLPTSPYHFADTFEDYRRGVERVGYPCVVKPIMSS SGKGQSVLKGPDDLQAAWDYAQEGGRAGKGRVIVEGFIDFDYEITLLTVRHVDGTTFC APIGHRQVKGDYHESWQPQAMSAQALAESERVARAVTEALGGRGLFGVELFVKGDQVW FSEVSPRPHDTGLVTLISQDLSEFALHARAILGLPIPVIRQLGPSASAVILVEGKSRQ VAFANLGAALSEADTALRLFGKPEVDGQRRMGVALARDESIDAARAKATRAAQAVRVE L" misc_feature complement(4203378..4204505) /gene="purT" /locus_tag="PA3751" /note="Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]; Region: PurT; COG0027" /db_xref="CDD:439798" gene complement(4204543..4204737) /locus_tag="PA3752" /db_xref="GeneID:880437" CDS complement(4204543..4204737) /locus_tag="PA3752" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252441.1" /db_xref="GeneID:880437" /translation="MNERPVASPCVHVCALDEQDICIGCQRTAAEITRWGLMSNDERR EVLGRCFERAKAQGLVSGSA" misc_feature complement(4204570..4204737) /locus_tag="PA3752" /note="Predicted Fe-S protein YdhL, DUF1289 family [General function prediction only]; Region: YdhL; COG3313" /db_xref="CDD:442542" gene complement(4204734..4205258) /locus_tag="PA3753" /db_xref="GeneID:880438" CDS complement(4204734..4205258) /locus_tag="PA3753" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252442.1" /db_xref="GeneID:880438" /translation="MKYRLGDARVETHPDSWIAPSAAVIGKVRLDAGASVWFGAVLRG DNELIHIGEHSNVQDGSVMHTDMGYPLTLGKGVTVGHNAMLHGCSVGDYSLVGINAVI LNGAKIGKYCIIGANALIPEGKEIPDGSLVMGSPGKVVRELSEPQKKMLEASAAHYVH NARRYARDLVEDPA" misc_feature complement(4204752..4205258) /locus_tag="PA3753" /note="Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily [General function prediction only]; Region: PaaY; COG0663" /db_xref="CDD:440427" gene complement(4205296..4205907) /locus_tag="PA3754" /db_xref="GeneID:880431" CDS complement(4205296..4205907) /locus_tag="PA3754" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252443.1" /db_xref="GeneID:880431" /translation="MNCTLDELRQRIEAHRPRQLDTDQRFPQAAVLVPITRSDDPELV LTLRAAGLSTHGGEVAFPGGRRDPEDADLVRTALREAEEEIALPPGLVEVVGPLSTLV SRHGIEVTPYVAFIPDFVEYQPNDGEIAAVFNVPLSFFRDDPREVTHRIDYFGRSWYV PSYRFGEFKIWGLTAIMVVELVNLLYDDPIDLHTPPASFIKLS" misc_feature complement(4205365..4205826) /locus_tag="PA3754" /note="coenzyme A pyrophosphatase and similar proteins; Region: NUDIX_CoAse_Nudt7; cd03426" /db_xref="CDD:467532" gene 4206048..4206602 /locus_tag="PA3755" /db_xref="GeneID:880432" CDS 4206048..4206602 /locus_tag="PA3755" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252444.1" /db_xref="GeneID:880432" /translation="MKFCSLCGATVVQRIPDGDNRLRYVCDACHTVHYQNPRIVAGSL PVWDGQVLLCRRAIAPRLGYWTLPAGFMENGETLAQAAARETEEEANARIGDLQLYTL FDLPHISQVYLFFRAELLDLDFSAGDESLEVRLFDEAEIPWSELAFPTIGRTLECYFS DRREGCFPVRNEAIAPMLASYKKD" misc_feature 4206051..4206146 /locus_tag="PA3755" /note="Nudix N-terminal; Region: Nudix_N_2; pfam14803" /db_xref="CDD:464323" misc_feature 4206156..4206524 /locus_tag="PA3755" /note="uncharacterized NUDIX hydrolase subfamily; Region: NUDIX_Hydrolase; cd04511" /db_xref="CDD:467545" gene 4206665..4207165 /locus_tag="PA3756" /db_xref="GeneID:880314" CDS 4206665..4207165 /locus_tag="PA3756" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252445.1" /db_xref="GeneID:880314" /translation="MRWLLALLCLTFASLTQANAAPSLEGKVDKVLVLKSERKLLLLN KGNVLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWIDWRKTSNNYNLSMHISYPNARDV AKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWTNGCIAMNNTDMREVWSVVKDGT LIEIRP" misc_feature 4206665..4207162 /locus_tag="PA3756" /note="Murein L,D-transpeptidase YafK [Cell wall/membrane/envelope biogenesis]; Region: YafK; COG3034" /db_xref="CDD:442269" gene 4207408..4208151 /locus_tag="PA3757" /db_xref="GeneID:880315" CDS 4207408..4208151 /locus_tag="PA3757" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252446.1" /db_xref="GeneID:880315" /translation="MKTAHDLLLALRPDEAQPTPLYLQLARNLESAIHAGQWKAEEAL PSERNLSETLNISRVTARKALEVLFEQGLIRRNQGSGTFITPRLEQPLSRLSSFSEML RLKGFTPGSTWLERGIALPTHDELIRLGLSPTEKVTRMKRLRKADGTVMAIENSTLPA RLLPDPTAVGDSLYEYLDGIGRPVVRALQHVRAINSSASDAALVGIAPGTAMLLMTRI GYLEDNTPIELTDTYCRNDYYDFVAELRR" misc_feature 4207459..4208148 /locus_tag="PA3757" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: MngR; COG2188" /db_xref="CDD:441791" gene 4208168..4209259 /locus_tag="PA3758" /db_xref="GeneID:880471" CDS 4208168..4209259 /locus_tag="PA3758" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="N-acetylglucosamine-6-phosphate deacetylase" /protein_id="NP_252447.1" /db_xref="GeneID:880471" /translation="MLEGNILTPQGWVLGRLHIQDGRIQRIEGEPCDPAGNADPYLLP GFIDLHVHGGGGRDIMEGGDAFATIARTHRRFGTTSLLATTMTAPREEIADILSQLGA YCRRSLEGGSRILGVHLEGPYINSGKLGAQPNFAHAAVLEEVEDYLRRAPIRVITIAP EIAGHRPLIRALAERGVRLQIGHTLGSYEDGVAALEAGASSFTHLYNAMTGLHHREPG IVGAALAHARYAELIPDLLHVHPGAIRVALRSIPCLYCVTDSTAAAGMPDGQYKLGSH TVTKCLGGVRLPDGTLAGSTLTMDQALRNLVKIGLPLAEASQRLSQFPADYLGLAERG RLAPAAWADVVRLDRSLELDAVMVEGELE" misc_feature 4208177..4209247 /locus_tag="PA3758" /note="N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to...; Region: NagA; cd00854" /db_xref="CDD:238434" misc_feature order(4208315..4208317,4208321..4208323,4208525..4208527, 4208558..4208560,4208714..4208716,4208777..4208779, 4208786..4208791,4208879..4208881,4208942..4208944, 4209041..4209043) /locus_tag="PA3758" /note="active site" /db_xref="CDD:238434" misc_feature order(4208783..4208785,4208801..4208803,4208807..4208812, 4208816..4208818,4208837..4208842,4208876..4208887, 4208891..4208896,4208900..4208905,4208912..4208914) /locus_tag="PA3758" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238434" gene 4209256..4210278 /locus_tag="PA3759" /db_xref="GeneID:880472" CDS 4209256..4210278 /locus_tag="PA3759" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_252448.1" /db_xref="GeneID:880472" /translation="MTSLMLEEALSAATVASRQLAVLDACLPALGQRLREVDPNLALT VARGSSDHAASYFAYLAMQHAGLPVASLPMSVVTLNRSPLRVAGQAVFAFSQSGQSPD LVDSLRILRERGALGIALVNAEDSPLEAASEFVVPLCAGAERSVAATKSFIATLSASA RLLAHWQRDNALLAAGQGLAAGLEQAARLDWSPAIEVLRDCQRLMVIGRGAGYAIAQE AALKFKETSAIQAEAFSSAEVRHGPMALVEERYPLLVFAPRGPEQEGLLALAEDMRQR GAQVLLAAPDDIAERDLPLQRAAHPALDPILAIQSFYVMAAGLAEARGMDPDQPRHLS KVTRTH" misc_feature 4209271..4210275 /locus_tag="PA3759" /note="Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain [Cell wall/membrane/envelope biogenesis]; Region: AgaS; COG2222" /db_xref="CDD:441824" gene 4210295..4212823 /locus_tag="PA3760" /db_xref="GeneID:880499" /db_xref="PseudoCap:PA3760" CDS 4210295..4212823 /locus_tag="PA3760" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="N-acetyl-D-glucosamine phosphotransferase system transporter" /protein_id="NP_252449.1" /db_xref="GeneID:880499" /db_xref="PseudoCap:PA3760" /translation="MNNKNLALKAPLSGPVMPLNRVPDPVFSSGTLGEGIAIDPLNDC LHAPCAGLVSHLARTRHALSLRADNGAELLLHVGLDTVQLQGEGFEALVEEGARVIEG QPLLRFDLDRVARGSRSLITVMILTNGDGFQVRPLTTNPVEVGAPLLQLSPEKAEQRP ANPAPGEGSAQRQVRGRARVAHHGGLHARPAALLRKTAQGFSSQAELHFAGQVASVDS LVGIMGLGVAEQDEVEVICRGEDSEAALGALLAALASATAGAPKDAPRAIAPGEPARP AAVAGTLAGVCASPGLASGPLARLGAISLPADDGRHRPEEQHLALDQALQRVRDDVQG SLQQARLGGDENEAAIFSAHLALLEDPGLLDAADMLIDQGVGAAHAWHRAIQAQCEIL QALGNLLLAERANDLRDLEKRVLRVLLGDTAPLRVPAGAIVAAREITPSDLAPLVDAG AAGLCMAEGGATSHVAILARSKGLPCLVALGAGLLELEEGRQVVLDAGQGRLELSPDA RRLEQVALQVAQREEQRRRQQADAQREALTRDGRRIEIGANVASPREAAEAFANGADG VGLLRTEFLFLERRAAPDEEEQRNAYQEVLDAMGQRKVIIRTIDVGGDKHLDYLPLPV EENPALGLRGIHLGQARPELLDQQLRALLRVEPLERCRILLPMVSEVDELRAIRRRLG ELATQLGIERLPELGVMIEVPSAALLADQLAEHADFLSIGTNDLSQYALAMDRCHAGL ADRIDALHPALLRLIAQTCAGAARHGRWVGVCGALASDPLATPVLVGLGVEELSVGPN LVGEIKTRVRQLDAAECRRHAQALLDLGSARAVRDACLQHWPLA" misc_feature 4210295..4210750 /locus_tag="PA3760" /note="Phosphotransferase system IIA component [Carbohydrate transport and metabolism]; Region: NagE; COG2190" /db_xref="CDD:441793" misc_feature 4210823..4211023 /locus_tag="PA3760" /note="Histidine-containing phosphocarrier protein (HPr)-like proteins. HPr is a central component of the bacterial phosphoenolpyruvate sugar phosphotransferase system (PTS). The PTS catalyses the phosphorylation of sugar substrates during their translocation...; Region: PTS-HPr_like; cd00367" /db_xref="CDD:238217" misc_feature 4210823..4210834 /locus_tag="PA3760" /note="dimerization domain swap beta strand [polypeptide binding]; other site" /db_xref="CDD:238217" misc_feature order(4210850..4210852,4210856..4210861,4210865..4210870, 4210880..4210882,4210889..4210891,4210943..4210954, 4210961..4210966) /locus_tag="PA3760" /note="regulatory protein interface [polypeptide binding]; other site" /db_xref="CDD:238217" misc_feature 4210853..4210855 /locus_tag="PA3760" /note="active site" /db_xref="CDD:238217" misc_feature 4210946..4210948 /locus_tag="PA3760" /note="regulatory phosphorylation site [posttranslational modification]; other site" /db_xref="CDD:238217" misc_feature 4211141..4212808 /locus_tag="PA3760" /note="Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]; Region: PtsA; COG1080" /db_xref="CDD:440698" gene 4212848..4214560 /locus_tag="PA3761" /db_xref="GeneID:880500" /db_xref="PseudoCap:PA3761" CDS 4212848..4214560 /locus_tag="PA3761" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="N-acetyl-D-glucosamine phosphotransferase system transporter" /protein_id="NP_252450.1" /db_xref="GeneID:880500" /db_xref="PseudoCap:PA3761" /translation="MPPFLIESLQRLGRALMLPIAILPIAGLLLRLGDVDLLDIPLVH DAGKAIFANLALIFAIGIAVGFARDNNGTAGLAGAIGYLVMISVLKVIDPGIDMGVLS GIISGLVAGALYNRFKDVKLPEYLAFFGGRRFVPIATGISAVCLGLLFGVIWPPLQQG INGLGQLMLESGSFGAFAFGVLNRLLIVTGLHHILNNLVWFVFGSFTDPETGRVVTGD LARYFAGDPKGGQFMAGMFPVMMFGLPAACLAMYRNARPERRKLIGGLLLSMALTAFL TGVTEPVEFAFMFLAPLLYLLHALLTGLSMALTDLLDIRLGFTFSGGAIDLALGWGRS THGWMLWPLGLLYAGIYYLVFDFCIRRFNLKTPGREDDASSESGDNAEAERAPAFIRA LGGAANLEVVDACTTRLRLRLVDRNKASDAQLKALGAMAVVRPGKAGSLQVVVGPQAD SIADEIRRALPFDTQPGEAVPPLGSPHTAEEVVAMQATVDAAEAQAWLGALGGAGNLR EVRDVALTRLRVSVADERKLATEQLRRLGGQGVSSLAGGICHILVGPRAAALSQALQP LLRR" misc_feature 4212872..4214218 /locus_tag="PA3761" /note="PTS system, N-acetylglucosamine-specific IIBC component; Region: PTS-II-BC-nag; TIGR01998" /db_xref="CDD:273920" misc_feature 4214327..4214551 /locus_tag="PA3761" /note="Phosphotransferase system IIB components [Carbohydrate transport and metabolism]; Region: PtsG2; COG1264" /db_xref="CDD:440876" gene complement(4214762..4215079) /locus_tag="PA3762" /db_xref="GeneID:879751" CDS complement(4214762..4215079) /locus_tag="PA3762" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252451.1" /db_xref="GeneID:879751" /translation="MYKLCFYVPESHLDVVKQAVFAAGGGRIGAYDSCCWQSLGQGQF RPLDGSQPYLGQVGQVEHVAEWKVELVVADELIHASVKALKAAHPYETPAYEVWRLTD MVF" misc_feature complement(<4214780..>4215079) /locus_tag="PA3762" /note="PII-like insert in the uncharacterized protein YqfO, YbgI/NIF3 family [Function unknown]; Region: YqfO; COG3323" /db_xref="CDD:442552" gene complement(4215544..4219440) /gene="purL" /locus_tag="PA3763" /db_xref="GeneID:879752" CDS complement(4215544..4219440) /gene="purL" /locus_tag="PA3763" /EC_number="6.3.5.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine synthase" /protein_id="NP_252452.1" /db_xref="GeneID:879752" /translation="MLILRGAPALSAFRHGKLLEQLTQHVPAVTGLYAEFAHFADVTG ALTADEEQVLARLLKYGPSVPVQEPSGRLFLVVPRFGTISPWSSKASDIARNCGLAKI DRLERGIAYYVQGELSESDAQQVAARLHDRMTQLVLDRLEGAAELFSHAQPRPLTAVD VLGGGRAALEKANVELGLALAEDEIDYLLKSFGELGRNPHDVELMMFAQANSEHCRHK IFNASWDIDGQAQDKSLFGMIKNTYEMNREGVLSAYKDNAAVIVGHVAGRFFPDPQTR EYAASREPVQILMKVETHNHPTAIAPFPGASTGSGGEIRDEGATGRGAKPKAGLTGFT VSNLQIPGFEQPWEVPYGKPERIVTALDIMVEGPLGGAAFNNEFGRPALTGYFRTFEQ KIATPHGEEVRGYHKPIMLAGGMGNIRDEHVQKGEISVGAKLIVLGGPAMLIGLGGGA ASSMATGASSADLDFASVQRDNPEMERRCQEVIDRCWQLGERNPISFIHDVGAGGLSN ALPELINDGGRGGRFELRAVPNDEPGMSPLEIWCNESQERYVLSVDAADFETFKAICE RERCPFAVVGEAIEQRQLTVADSHFDNKPVDMPLEVLLGKAPRMHRAVTREAELGDDF DAAGLELQESVERVLRHPAVASKSFLITIGDRTITGLVARDQMVGPWQVPVADCAVTA TSFDVYTGEAMAMGERTPLALLDAPASGRMAIGETVTNLAAARVGKLSDIKLSANWMA AAGHPGEDARLYDTVKAVGMELCPELGITIPVGKDSMSMKTRWQDNGEDKSVTSPVSL IVTGFAPVADVRQSLTPQLRLDKGETDLILIDLGRGKNRLGGSILAQVHGKLGRAVPD VDDAEDLKAFFAVIQGLNADGHILAYHDRSDGGLITSVLEMAFAGHCGVELNLDALAD SREELAAVLFSEELGAVIQVREGATPEVLAQFSAAGLDDCVAVIGQPVNGYEINLNYN GETVYSAQRRILQRIWSETSYQIQRLRDNADCAEQEFDALLDEDNPGLSIKLSYDVND DIAAPYIKKGVRPKVAILREQGVNGQVEMAAAFDRAGFAAIDVHMSDILAGRVDLDAF KGLVACGGFSYGDVLGAGEGWAKSILFNARARDGFQAFFARKDSFALGVCNGCQMMSN LHELIPGTEFWPHFVRNRSEQFEARVAMVQVQESSSIFLQGMAGSRLPIAIAHGEGHA EFESEEALLEADLSGCVSLRFVDNHGKVTEAYPANPNGSPRGITGLSSRDGRVTIMMP HPERVFRAVQNSWRPDDWQEDGGWLRMFRNARVWVD" misc_feature complement(4215547..4219440) /gene="purL" /locus_tag="PA3763" /note="phosphoribosylformylglycinamidine synthase; Provisional; Region: PRK05297" /db_xref="CDD:235394" gene 4219841..4221199 /locus_tag="PA3764" /db_xref="GeneID:880530" CDS 4219841..4221199 /locus_tag="PA3764" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="membrane-bound lytic murein transglycosylase F" /protein_id="NP_252453.1" /db_xref="GeneID:880530" /translation="MQKEGVLRVITRNSPATYFQDRNGETGFEYELAKRFAERLGVEL KIETADNLDDLYAQLSREGGPALAAAGLTPGREDDASVRYSHTYLDVTPQIIYRNGQQ RPTRPEDLVGKRIMVLKGSSHAEQLAELKKQYPELKYEESDAVEVVDLLRMVDVGDID LTLVDSNELAMNQVYFPNVRVAFDFGEARGLAWALPGGDDDSLMNEVNAFLDQAKKEG LLQRLKDRYYGHVDVLGYVGAYTFAQHLQQRLPRYESHFKQSGKQLDTDWRLLAAIGY QESLWQPGATSKTGVRGLMMLTNRTAQAMGVSNRLDPKQSIQGGSKYFVQIRSELPES IKEPDRSWFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVKKMLPRLAQKQWYAKTR YGYARGGETVHFVQNVRRYYDILTWVTQPQMEGSQIAESGLHLPGVNKTRPEEDSGDE KL" misc_feature 4219841..4221172 /locus_tag="PA3764" /note="membrane-bound lytic murein transglycosylase MltF; Region: PRK10859" /db_xref="CDD:236778" gene complement(4221213..4221797) /locus_tag="PA3765" /db_xref="GeneID:880531" CDS complement(4221213..4221797) /locus_tag="PA3765" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252454.1" /db_xref="GeneID:880531" /translation="MANDPYIQSFTCFDGTRRLLTAALPEVALALKQAVAGGAAGPLL VFDNATGRSVDLDIRGSSEDLLARLVVAGERQPAEEAAPRGRGRPKLGVVAREVTLLP RHWEWLAAQPGGASVALRKLVEEARRSQSGRARQAQERAYHFMNAMAGDLPGFEEATR ALFAGDREGFAERIAGWPTDVREHAAWLASDGES" misc_feature complement(4221225..4221791) /locus_tag="PA3765" /note="Uncharacterized conserved protein, DUF2239 domain [Function unknown]; Region: COG3644" /db_xref="CDD:442861" gene complement(4221923..4223179) /locus_tag="PA3766" /db_xref="GeneID:880560" CDS complement(4221923..4223179) /locus_tag="PA3766" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aromatic amino acid transporter" /protein_id="NP_252455.1" /db_xref="GeneID:880560" /translation="MSDTRVQQYQDHAGAEAVDSSGLEVKRLTFLEAVAMIVGTNIGA GVLSMAYASRKAGFMPLLLWLAVAGLFTTISMLYVSETALRTRTHNQLSGLAQRYVGS FGAWAIFLSVAVNSIGALIAYMSGSGKILSAFFGISPALGSVLFFIPAAGVLYLGLSA IGKGEKFISIGMVSMILILVAATLLNDNTEFARLLDGDWIYMVPVFNIAVFCFSAQYI VPEMARGFSHAPERLPKAVITGMLTTFVLLSIVPLSVIALTGLENQSEVATLAWGKAL GEWAFFTANTFALCAMLTSYWGLGGSFLTNIFDKFHKLGPENRPKTRLLVLAIVALPP FVLAYSGLVGFVNALYFAGAFSGVILSIMPILMLRSARRNGDFEPAWKCGWIAHPAIQ AVIVTIYLASAAYAICSAMNLLPAGW" misc_feature complement(4222061..4223104) /locus_tag="PA3766" /note="Amino acid permease [Amino acid transport and metabolism]; Region: SdaC; COG0814" /db_xref="CDD:440576" gene complement(4223568..4224116) /locus_tag="PA3767" /db_xref="GeneID:880561" CDS complement(4223568..4224116) /locus_tag="PA3767" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252456.1" /db_xref="GeneID:880561" /translation="MRVTKLISNGKGYPTVKGVRPIIDRSRDPHFMREALAEAEKAAA LGEVPVGAVLVREGEIIGRGFNRPISSHDPSAHAEMLAIRMAAAEAGNYRLPGSTLYV TLEPCSMCSGLLVHARIQRLVYGTVEPKSGAVESRGRFFEQEHLNHRVMVEGGVLAEE CSQALSAFFRARREAAKKPRED" misc_feature complement(4223601..4223975) /locus_tag="PA3767" /note="tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]; Region: TadA; COG0590" /db_xref="CDD:440355" gene complement(4224107..4225498) /locus_tag="PA3768" /db_xref="GeneID:880551" CDS complement(4224107..4225498) /locus_tag="PA3768" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="metallo-oxidoreductase" /protein_id="NP_252457.1" /db_xref="GeneID:880551" /translation="MTFTRRQVLGGLAGLAVVGLGAGGARLWLARPQVAQEYDYELIA APLDLEIVPGFSSPALAYGGQCPGVELRAKQGEWLRVRFTNRLDEPTTIHWHGIRLPI EMDGVPYISQPPVQPGESFIYQFKTQDAGSYWYHPHLMSSEQLGRGLVGPLIIEEREP TGFRHEKVLCLKTWHVDEQGAFTPFSVPRQAAREGTRGRYSTINGKHVPTIDLPAGQI VRVRLLNVDNTVTYRLNLPNGEARIYAIDGHPVEPRGFEGQYWIGPGMRLELALKVPE AGTELSLRDGPVRLATIRSVASAEAPAGDWPKPLPANPVSEPDLANAEKIGFRFEWVG AMSDTSGKNPYPSFWQINGKAWEGGEEHKHNAPPLAKLKEGQSYIFELRNMAQYQHPI HLHGMAFKVLDSDRRDIIPYFTDTYLLGKNETARVALVADNPGLWMFHCHVIDHMETG LMGTIAVGEAWCG" misc_feature complement(4224128..4225414) /locus_tag="PA3768" /note="Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cell cycle control, cell division, chromosome partitioning, Inorganic ion transport and metabolism, Cell wall/membrane/envelope biogenesis; Region: SufI; COG2132" /db_xref="CDD:441735" gene complement(4225660..4227237) /gene="guaA" /locus_tag="PA3769" /db_xref="GeneID:880552" CDS complement(4225660..4227237) /gene="guaA" /locus_tag="PA3769" /EC_number="6.3.5.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="GMP synthase" /protein_id="NP_252458.1" /db_xref="GeneID:880552" /translation="MSQDIHAHRILILDFGSQYTQLIARRVREIGVYCEIHPFDMSNE AIIAFAPRGIILAGGPESVHEADSPRAPQAVFDLKVPLFGICYGMQTMAEQMGGKVQG SDLREFGYARVDVVGKARLLDGIEDHVDDDGVLGLDVWMSHGDKVTEMPAGFHILAST PSCPIAAMADDARAYYGVQFHPEVTHTKQGLRILSRFVLDICGCAALWTPSNIVDDAI ATVRAQVGSSKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLHEGDQVMAM FAENMGVKVIRANAEDKFLGRLAGVADPEEKRKIIGRTFIEVFDEEATKLQDVKFLAQ GTIYPDVIESAGAKTGKAHVIKSHHNVGGLPEDMQFELVEPLRELFKDEVRKIGLELG LPYDMVYRHPFPGPGLGVRILGEVKKEYADLLRQADHIFIEELRAFDWYHKTSQAFVV FQPVKSVGVVGDGRRYAWVVALRAVETIDFMTARWAHLPYELLEKVSNRIINEIAGIS RVTYDVSSKPPATIEWE" misc_feature complement(4225663..4227225) /gene="guaA" /locus_tag="PA3769" /note="GMP synthase; Reviewed; Region: guaA; PRK00074" /db_xref="CDD:234614" gene complement(4227317..4228786) /gene="guaB" /locus_tag="PA3770" /db_xref="GeneID:880535" CDS complement(4227317..4228786) /gene="guaB" /locus_tag="PA3770" /EC_number="1.1.1.205" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="inosine 5'-monophosphate dehydrogenase" /protein_id="NP_252459.1" /db_xref="GeneID:880535" /translation="MLRISQEALTFDDVLLIPGYSEVLPKDVSLKTRLTRGIELNIPL VSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVKKHETAIVRDPVTVTP STKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRVKPNAGDTVAAIMTPKDKLVT AREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTYPLASKDEQGRLR VGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN IATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPL IADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGA MSGSQGSSDRYFQDASAGAEKLVPEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSA DIQQMRTQPQFVRITGAGMAESHVHDVQITKEAPNYRVG" misc_feature complement(4227362..4228765) /gene="guaB" /locus_tag="PA3770" /note="IMP dehydrogenase / GMP reductase domain; Region: IMPDH; pfam00478" /db_xref="CDD:459826" gene 4229050..4230027 /locus_tag="PA3771" /db_xref="GeneID:880579" CDS 4229050..4230027 /locus_tag="PA3771" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252460.1" /db_xref="GeneID:880579" /translation="MKGSTDPHSSSAALLAAFGAAVLDINRLARDKTLERFHRTALER LQQLVPFQRAWWGRAALIDGVPVEHSAHLFNLEEHYVEDWKSISHDDITVGLVHARPG TAVAVDMQATAGLRWLGARHDIGELLCVIHVDPITRLSDHVALYRTPGGPPFADQEKL LLGQLSAHLAAAVSANQIRTLVALRESLERQALAMAVCDRYGVLHCAERGFVDLLLGA WPGWTGPQLPEETSPQGYRDARLVIDSRQVGDLYLLTARQPSAIEQLSNREGDVALLF SEGKTYKQIARDLGLAPNTVRHHIRTIYSKLGVNDKASIAHLLHQFPPG" misc_feature 4229461..4230012 /locus_tag="PA3771" /note="DNA-binding transcriptional regulator, CsgD family [Transcription]; Region: CsgD; COG2771" /db_xref="CDD:442052" misc_feature <4229842..4230012 /locus_tag="PA3771" /note="DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains [Signal transduction mechanisms, Transcription]; Region: CitB; COG2197" /db_xref="CDD:441799" gene 4230162..4231058 /locus_tag="PA3772" /db_xref="GeneID:880580" CDS 4230162..4231058 /locus_tag="PA3772" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252461.1" /db_xref="GeneID:880580" /translation="MTHRTASMAAPTASALALFGIQLLLGAEAGAADLNARDFFGAPA GTTLGVLYLPATRAHEFHGPADRNGKAELKTNAVAYRQVFFSDICGTLCTPQFIIPFV DIDARLPGSVGHTGETGFGDPQVGGTLFFVNDLERRRYSGLLTLITLPLGEYHAKNPD VSPGANRWGATFVYNYTQGIGRDWVLEANLEAQFYAKNDDYFGSDLEQKPLYRLQAFA SYDFSQSTYGALKLVHADGGELKLQGHTLDDTHQRYTQLGFELGHWLDRRNSLMFGLS RNVATDNAFHGSQALLRLVHVF" misc_feature 4230363..4231043 /locus_tag="PA3772" /note="Putative MetA-pathway of phenol degradation; Region: Phenol_MetA_deg; pfam13557" /db_xref="CDD:463920" protein_bind complement(4230869..4230881) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4231071..4232228 /locus_tag="PA3773" /db_xref="GeneID:880598" CDS 4231071..4232228 /locus_tag="PA3773" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252462.1" /db_xref="GeneID:880598" /translation="MSASDKTLASASPASGNLALLAAIVVFAAITPTILMTAPAVAAQ LATQWQLSPARVGDLFSVELGAMSLATLPAFHWLKRVDWRHAALLAGLLFIAANLASA LAGSYPLLLALRFCSALAGGSLMILCLSSAASTATPSRVYGLWVMGQLVVGAVGLALL PALFERFGLAACYLLLAGLMGLALPLSRAFPSGSPPAEARASTGAVHSRLRVGLGILA VLTFYISLSGVWTFIGAIAEGAGIGAGASGEVLAVATLMGIAGAACASFIGNRLPRDL MLLGGYLAMAAAILLLIGQPPLARFALAALLFKFTWTFALPFILACLADLDRSGRLMN ASNLVIGGGLAIGPALAGRLIEGSGGFLPLLPIAAGLAALSLLLALACRPR" misc_feature 4231098..4232048 /locus_tag="PA3773" /note="Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism]; Region: AraJ; COG2814" /db_xref="CDD:442063" gene 4232258..4233400 /locus_tag="PA3774" /db_xref="GeneID:880599" CDS 4232258..4233400 /locus_tag="PA3774" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetylpolyamine aminohydrolase" /protein_id="NP_252463.1" /db_xref="GeneID:880599" /translation="MTRRTAFFFDELCLWHAAGPHALTLPVGGWVQPPAAAGHAESPE TKRRLKSLLDVSGLTARLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSLGQDA PIGPGSYEIARLSAGLAIAALDAVLAGEADNAYSLSRPPGHHCLPDQAMGFCFFANIA VAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQDGCFPPGYSGAED IGEDRGRGFNLNVPLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVDPL ARMQLHSDSFRAMTAMVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRS AVRDPLRDFIELQQPNAAFRDFQRQRLEELAAQFGLCPAQPLQAAR" misc_feature 4232270..4233355 /locus_tag="PA3774" /note="Histone deacetylases and histone-like deacetylases, classII; Region: HDAC_classII_1; cd09996" /db_xref="CDD:212521" misc_feature order(4232684..4232689,4232711..4232716,4232798..4232800, 4232804..4232806,4233062..4233064,4233188..4233190) /locus_tag="PA3774" /note="active site" /db_xref="CDD:212521" gene complement(4233385..4234167) /locus_tag="PA3775" /db_xref="GeneID:880478" CDS complement(4233385..4234167) /locus_tag="PA3775" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252464.1" /db_xref="GeneID:880478" /translation="MSSLDPSVLFAALPFSLWQWLLVELAIVLAYVVFGIAGFGTALV AGPLLAGVLPLSQIIPLLVLLDFSASFGNWLPARRQIAVTELKRLLPCMLLGCALGAY GLLALRAELLMLALGVFVSLYALYALFLQPRGQPRWRATWALPFGVFGGLFGALFGSG GFLYSLYLNGRLASKEQMRATQSALIGCSTFVRLGLFLLAGLYAAREPWLLAACLLPG MALGLWIGRRVTLRLSREAFVRLVTWLVLCSGLALVGRYLAA" misc_feature complement(4233391..4234119) /locus_tag="PA3775" /note="Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family [Inorganic ion transport and metabolism]; Region: TauE; COG0730" /db_xref="CDD:440494" protein_bind complement(4233918..4233930) /locus_tag="PA3775" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4234275..4235183 /locus_tag="PA3776" /db_xref="GeneID:880479" CDS 4234275..4235183 /locus_tag="PA3776" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252465.1" /db_xref="GeneID:880479" /translation="MISLRQLHYFVEIVESGGFSRAAERLFVAQSALSRQVRELEDSI GTPLLRRGPRQVELTPAGRAFLPRAQRLLGDLEAARRLAREVGEGGHGLLRLGHSSSV PLVGGLQAALRGYLAVQSGVRLELTQQSSEQQLADLAEGRLDLGLLRLPVLRQHPRLH LRALYREPLLLALAADHPLARREAPVALAALAGETFVSIPHLQRGGLSYRAAELCLGA GFYPRPARALSRKTSQLQLIEAGFGVALVPASMRAIAPPAVSFMSLAEAEAYSEVALA WRRDDSPLVEGFVEYFLENLPNEAKD" misc_feature 4234278..4235165 /locus_tag="PA3776" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 4235220..4236599 /gene="xseA" /locus_tag="PA3777" /db_xref="GeneID:878333" CDS 4235220..4236599 /gene="xseA" /locus_tag="PA3777" /EC_number="3.1.11.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease VII large subunit" /protein_id="NP_252466.1" /db_xref="GeneID:878333" /translation="MRNDPFQRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSN LARPASGHVYFTLKDSNAQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQ LIADTVEPAGDGALRLAFEALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIR DIISVFRRRAPQVELTLVPTAVQGREAVAQIVRALQLADRQGFDALILARGGGSLEDL WCFNEEAVARAVAACATPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQ QRLDGLRRRLVLRMRDQLLRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFE RQLAVRHERLVRLETRLAAQHPGRTLALLRQKLDSLAARLPRAAREVLKDRRQRLEGL AQTLNVVSPLATLGRGYSILLDERGRAIRDAGQTQPGQRLKARLAEGELEVRVEDNHR TPVTLSLLD" misc_feature 4235256..4236569 /gene="xseA" /locus_tag="PA3777" /note="Exonuclease VII, large subunit [Replication, recombination and repair]; Region: XseA; COG1570" /db_xref="CDD:441178" gene 4236606..4237541 /locus_tag="PA3778" /db_xref="GeneID:878334" CDS 4236606..4237541 /locus_tag="PA3778" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252467.1" /db_xref="GeneID:878334" /translation="MIRLSQRALAYLNEVIHHGSLRRAAQHLNIDPSAISRQLASLEE HLGVRLLQRTPQGVAPTEAGELLVAHYRQQRANEEGVLSRLSALQGLRQGKVRLAVGE GFIADLISQPLQSFILRYPGIELEVRMAGANEGVALVKEDAVDLALVYAPVEDGELDV HVDTRQPLDLIIPANHALAGHRGAVPMRALRNESLALIHNSTGMGQLAVIAAQLERIE LRPKLRTNSVAVLTNFVKSGIGVAFMPELTVSHEIEAGHIRCLPLAHPALRDARARIV SHKGRELTVAAIACLEHLRRGMRFFSGDAPGLSQR" misc_feature 4236624..4237502 /locus_tag="PA3778" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 4237693..4238733 /locus_tag="PA3779" /db_xref="GeneID:879148" CDS 4237693..4238733 /locus_tag="PA3779" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252468.1" /db_xref="GeneID:879148" /translation="MHTNPRRGLARRFAAGLLAAALGLGGSLAQAATTLNLSYNGAAD SEKNLVHLFASNLKRLAEEKSGGELQFKLYPNSMLGEEEQRMEQVMTGPGLNIASFAG IAPLFPEIYVSATPFMFKDAAAAHAFFDSGSYWQAAREAFRERTGTELLAVVEEGGFL NFTNGKKPIHGPADFQGLRFRAMDPSQVALYEAFGASGTPIPWTELYMGLRTGVADGQ MNPTSYIILGSLYQVQKYLTLANIQYSDQFLVANGDLLASLPAKERQALLDAAAEASR LNREAVAAQQERDLAFLKEKGMQIIQPSADDLAAFREKGQPSYLAWLKTQDIEPRWTE MAFRDAGLATAP" misc_feature 4237792..4238703 /locus_tag="PA3779" /note="Uncharacterized substrate-binding protein of the Tripartite ATP-independent Periplasmic transporter family; the type 2 periplasmic-binding protein fold; Region: PBP2_TRAP_SBP_like_6; cd13677" /db_xref="CDD:270395" misc_feature order(4238233..4238235,4238239..4238241,4238299..4238301, 4238350..4238355,4238362..4238364,4238425..4238427) /locus_tag="PA3779" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270395" protein_bind complement(4238438..4238450) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(4238445..4238457) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 4238455..4238467 /locus_tag="PA3779" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4238808..4239302 /locus_tag="PA3780" /db_xref="GeneID:879149" CDS 4238808..4239302 /locus_tag="PA3780" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252469.1" /db_xref="GeneID:879149" /translation="MPSLLKGMRAALLNLATLLLLLDLVLLIYGVFARYLLGSSPIWM DELARYLIIGAVMLALGAVWMEGGHMRVNLLEQRLSPRLAQALRLYQWLLALAFFAFA AWVSTRYALNAGRFRSLGLGVSRTWPLLSLPLGFGLLTLMLLLQGPWPRQPASTTVEG GSQA" misc_feature 4238889..4239206 /locus_tag="PA3780" /note="TRAP-type C4-dicarboxylate transport system, small permease component YiaM [Carbohydrate transport and metabolism]; Region: DctM; COG3090" /db_xref="CDD:442324" gene 4239299..4240579 /locus_tag="PA3781" /db_xref="GeneID:879165" CDS 4239299..4240579 /locus_tag="PA3781" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_252470.1" /db_xref="GeneID:879165" /translation="MMAIAMIAAFVVNLLLGLPLFLCLLLTALVGFLFVDPALFANTL PQRFFGGMDIFSLMAIPLFVLAGNLMNHSGMTPRLMRLANALVGHFRGGLGHVNVVAG VFFAGVNGSAAADASALSTLLVPAMEKEGYSRRFAAGLTAGSSLIGPIIPPSIFMILY SSLTNTSVGELFLAGVIPGLLLAAAFMLLNAVYAYRNGLQARHAAPAWGEILAALSGA LTALIAPVIIVAGIVLGLVTPTESGALIALYVALVGMLQRQLNLVGLWNSLRETVRLT ASIYVIIAAASVVNWLLNYAQVASEFAQLLEPFGHSPTLMLFIISAVIFVCGMLMEEV SVLMLLTPIVAPVALAAGVDPVHLGLIFTLNITIALITPPMGACLFIVATISRLDILE MFKGIWPFILVALGVLSLLILFPSLTLWLPRLLN" misc_feature 4239299..4240573 /locus_tag="PA3781" /note="TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]; Region: DctQ; COG1593" /db_xref="CDD:441201" gene complement(4241342..4242295) /locus_tag="PA3782" /db_xref="GeneID:879166" CDS complement(4241342..4242295) /locus_tag="PA3782" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252471.1" /db_xref="GeneID:879166" /translation="MSRQSVAVVAFDRISPFHLSVPCLVFGQECYDPCAQAFDLRVCT AEPGRLRTTVGFTIEAEAGLEALAEAQTVIVPSWRDPHERPPQALLDALIAARARGAQ LVGLCLGAFVLAEAGLLDGRRATTHWMWAEDFAGRFPAVRVEPDVLYIEDDGLLTSAG TVAGIDCCLHLVRQRLGAQTTNHLARRLVVAPHRQGGQAQFIEQPLPDSAQDGRLGEL LVWLRQNLDQAHSLDSLAQRVLMSRRTFTRHFRQLTGTTVSQWLQAERLALAQRLLET TEHSVQAIAGLAGFGSAVSLRQQFSAAFGLPPLGYRRAFAS" misc_feature complement(4241345..4242280) /locus_tag="PA3782" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene 4242416..4243045 /locus_tag="PA3783" /db_xref="GeneID:879102" CDS 4242416..4243045 /locus_tag="PA3783" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252472.1" /db_xref="GeneID:879102" /translation="MSARQPKRALLVIDVQNEYVSGNLRIEFPAIQSSLERIGAAMDA AHAAGIPIVVVQHLAPADSPLFARGSRQAELHEVVASRPYQHKVEKQLASSFVGTGLA DWLRERGIDTLAVVGYMTQHCDDSTIRQAIHEGWQVEYLHDASGSVPYRNRAGQASAE EIHRIFGIVLQSSFAAVLSTEEWLESLAGRHVPERDNIYDSNQRALANR" misc_feature 4242440..4242913 /locus_tag="PA3783" /note="Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia; Region: nicotinamidase_related; cd01014" /db_xref="CDD:238496" misc_feature order(4242455..4242457,4242683..4242685,4242782..4242784) /locus_tag="PA3783" /note="catalytic triad [active]" /db_xref="CDD:238496" misc_feature 4242767..4242772 /locus_tag="PA3783" /note="conserved cis-peptide bond [active]" /db_xref="CDD:238496" gene complement(4243080..4243652) /locus_tag="PA3784" /db_xref="GeneID:879103" CDS complement(4243080..4243652) /locus_tag="PA3784" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252473.1" /db_xref="GeneID:879103" /translation="MNSNRYPLPAQTGLVVAPGLPPKNSTLRPDQLNKRLSSAWHHLY DLCPELLKIDPPDGLTILRGFLQWAAEQKAAWNWAMHLRLYCWLLQSPFGAKVTDEHL EVLMDASAARWTVDDTSANRGILLASQGGAHITQDWKAPQAGAGTRVPLERLDLPAPN WTFAYCAVPDPRLREFPGWKPLPARGSLVG" misc_feature complement(4243104..4243604) /locus_tag="PA3784" /note="AZL_007950 family protein; Region: AZL_007950_fam; TIGR04061" /db_xref="CDD:274952" gene complement(4243709..4244185) /locus_tag="PA3785" /db_xref="GeneID:879117" CDS complement(4243709..4244185) /locus_tag="PA3785" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252474.1" /db_xref="GeneID:879117" /translation="MRTSFFAAAALLAVSAFAQAHEYNAGQLHIEHPWALALPPTSPN GAAYFVVQNHGKENDTLLGADTPRAASAEVHEHVHKNGMMSMQKVDSVDVAPGKDLRF APGGYHLMLMGLKQPLVAGERFPLTLHFRKAGDVPVEIVVESKAPAEQGGHEQHGH" misc_feature complement(4243754..4244131) /locus_tag="PA3785" /note="Copper(I)-binding protein [Inorganic ion transport and metabolism]; Region: COG2847" /db_xref="CDD:442095" gene complement(4244315..4244704) /locus_tag="PA3786" /db_xref="GeneID:879118" CDS complement(4244315..4244704) /locus_tag="PA3786" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252475.1" /db_xref="GeneID:879118" /translation="MPLSRRPVAWLASLAVLMNLFVVPLSQALTTQERASLLLGGFCS TSSDSLLRLKLGAALKDIDLPDDHESLAPHLCCCAGAAGTPGLVASWPALPLAPLASP ARNAFSATDLPPLRYWRLANPRASPVA" gene 4244876..4245724 /locus_tag="PA3787" /db_xref="GeneID:880585" CDS 4244876..4245724 /locus_tag="PA3787" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252476.1" /db_xref="GeneID:880585" /translation="MPRTLAFVSTLLLAAFCALPAQADSFIMRLLNKPVPGGVAVVDL GEEGPPPRAFYQGKPVLVVREEGRRWIAVVGIPLSTKPGPQKLEVRAATGNHEERFSV GSKHYREQRITLKNKRQVNPLPEDLKRIERELAEQTAAYRRFSPGLPSNLMLDKPVDG PLSSPFGLRRFFNGEERNPHSGLDFAVPAGTPIKAPAAGKVILIGDYFFNGKTVFVDH GQGFISMFCHLSKIDVKLGQQVPRGGVLGKVGATGRATGPHMHWNVSLNDARVDPAIF IGAFQP" misc_feature 4244969..4245190 /locus_tag="PA3787" /note="Peptidase family M23 N-terminal domain; Region: Peptidase_M23_N; pfam18421" /db_xref="CDD:436488" misc_feature 4245230..4245712 /locus_tag="PA3787" /note="Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain [Cell wall/membrane/envelope biogenesis]; Region: NlpD; COG0739" /db_xref="CDD:440502" gene 4245810..4246205 /locus_tag="PA3788" /db_xref="GeneID:880586" CDS 4245810..4246205 /locus_tag="PA3788" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252477.1" /db_xref="GeneID:880586" /translation="MTHPLRLLWLCSTLFVVLGLGFVFFPGPLASLLTSGEPLTPAAL TDLRASYGGTSFGIGLLLGYAALRPRYLVLGLLAALAVIASGGAARLYGVLIDASPAL TTFLWLGAEALLCVLLLAALWKTRQLDLD" misc_feature 4245828..4246136 /locus_tag="PA3788" /note="Domain of unknown function (DUF4345); Region: DUF4345; pfam14248" /db_xref="CDD:433809" gene complement(4246223..4247638) /locus_tag="PA3789" /db_xref="GeneID:879090" CDS complement(4246223..4247638) /locus_tag="PA3789" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252478.1" /db_xref="GeneID:879090" /translation="MQSNEKNGRDFYALAWRWHFYAGLFVAPFMILLALTGIVYLFKP QLDALLYPQLLRVEAGAQMRSADQLLVGVRQAHPQAAVSQYLPPSEAGRSAQFVIGEE GRQWNLFVDPYSGRELGRQDAQLNLQAVARALHGELMVGTVGDRLIELAAGWGIVLVV SGLYLWWPRGRAASALFWPRLHLRGRPLWRELHVLAGFWGSLLLLFMLLSGMTWTGYW GKQFADVWNRFPAAMWNDVPTSDMQAGSLNSASRQQVPWPLENTPLPRSQPPAADAHA EHRGHSAQAGHAMPMDMPMPAGIPLQRVVDIARERGVAAGYGIALPSGMEGVYTISVF PDDPRHDATLHIDQYSGKVLADVRWQDYNAVARSVQMGVVLHEGKLFGLGNQLLMLAV CLAILLSSASGLWIWWKRKPAGRLGVPPLRHELPRWKTGIAIMLALGVAFPLVGASLL LVWALDWLVLSRLPAVRRVLA" misc_feature complement(4246394..4247614) /locus_tag="PA3789" /note="PepSY-associated TM region [Function unknown]; Region: PiuB; COG3182" /db_xref="CDD:442415" gene complement(4247703..4249874) /gene="oprC" /locus_tag="PA3790" /db_xref="GeneID:879091" CDS complement(4247703..4249874) /gene="oprC" /locus_tag="PA3790" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="copper transport outer membrane porin OprC" /protein_id="NP_252479.1" /db_xref="GeneID:879091" /translation="MEKRMSTQQRAAGNACPTAAFSFDPARLAQRRRWAGAFAALCGL ALSPSALLAEEHSQHQDHAVELAPSVVTGVAQSSPLTIVTNPKEPRQPVPASDGADYL KTIPGFAVIRNGGSNGDPVLRGMFGSRLNILTNGGMMLGACPNRMDAPTSYISPETYD KLTVIKGPQTVLWGPGASAGTILFEREPERFGELGSRVNASLLAGSNGRFDKVLDAAA GNRLGYLRFTGNHAQSDDYEDGAGNTVPSRWKKWNGDVAVGWTPDEDTLIELTAGKGD GEARYAGRGMDGSQFKRESLGLRFVKSNVSDVLEKVEAQVYYNYADHIMDNFRLRTPD PSSMMPMPMASQVDRRTLGGRLAATWRWDDFKLVTGVDAMRNEHRARGSKYDMMTDYY TDADQFPWSKDAVFHNYGAFGELTWFAAERDRLIGGLRLDRASVKDYRQTLKSGHMGH AMANPTANDTRADTLPSGFVRYEHDLADSPTTLYAGLGHAERFPDYWELFSPKRGPNG SVNAFDKIKPEKTTQLDFGLQYNGDKLQAWASGYVGVVQDFILFSYREGMMGSSTQAT NVDARIMGGELGASYQLTGNWKTDASLAYAWGKNSSDDRALPQIPPLEARFGLTYEEG DWSAGSLWRVVAPQNRIARDQGNVVGKDFDKSAGFGVFSLNGAYRVTRNVKLSAGVDN LFDKDYTEHLNKAGDAGFGFSANETVPEPGRTFWTKVDFSF" misc_feature complement(4247706..4249631) /gene="oprC" /locus_tag="PA3790" /note="TonB-dependent copper receptor; Region: TonB-copper; TIGR01778" /db_xref="CDD:273801" gene complement(4249995..4250456) /locus_tag="PA3791" /db_xref="GeneID:879940" CDS complement(4249995..4250456) /locus_tag="PA3791" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252480.1" /db_xref="GeneID:879940" /translation="MATTLKRQGIGAWLALFAMLMIFVGPLISQSMPMDHPMPMGVGM GHEGMSHENMDHGDMAHAGCSDAQRSVVHAGMPGMGGEEGNRLASDVLWEKCGYCSLL FHSPPLTEDACLALFSVPFATAPAVAFLNEAFVASPVFPGARTRAPPFLIA" misc_feature complement(4250010..4250420) /locus_tag="PA3791" /note="Protein of unknown function (DUF2946); Region: DUF2946; pfam11162" /db_xref="CDD:431693" gene 4250828..4252606 /gene="leuA" /locus_tag="PA3792" /db_xref="GeneID:879941" CDS 4250828..4252606 /gene="leuA" /locus_tag="PA3792" /EC_number="2.3.3.13" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /protein_id="NP_252481.3" /db_xref="GeneID:879941" /translation="MPGQPATAWLSDASLHLVTAFAWPRRPRNRLQRISPMSMLKDPS QKYRPFSAINLPDRTWPSKTITEVPIWCSSDLRDGNQSLIEPMDAAKKMRFFKTLVQV GLKQIEVAFPSASDTDFNFVRELIEGNHIPDDVTIQVLTQAREDLITRTFESLRGAKK AIVHVYNATAPSFRRIVFNQDKQGVVDIATNAAKLIKKLAAEQPETQWSFQYSPEIFS STELEFSVEVCNAVIDVWQPTPDNKIILNLPATVECATPNVYADQIEWFGRHVDKRDS VIISLHTHNDRGTGVAATELGLMAGADRVEGCLFGNGERTGNVDLVTLALNMYTQGLH PQLDFSDIDAVRKVVEECNQLPVHPRHPYVGDLVHTAFSGSHQDAIRKGFAQQKEDAI WEVPYLPIDPADIGRDYEAVIRVNSQSGKGGITFLLEQEYGISLPRRMQIEFSQVVQG ETDRLGLEMTAQQIYSLLENEYLKATSPYVLASHRLQEENGTSAVDLEVSFDGEKQHW RGIGKGPLEALVAALPVKAEIMDYHEHAIGAGANAKAAAYIEIRLEGQRPLHGIGIDE NITTASFRALFSALNRAVTQAEAKAA" misc_feature 4250942..4252579 /gene="leuA" /locus_tag="PA3792" /note="2-isopropylmalate synthase; Validated; Region: PRK03739" /db_xref="CDD:235154" gene complement(4252677..4253009) /locus_tag="PA3793" /db_xref="GeneID:879123" CDS complement(4252677..4253009) /locus_tag="PA3793" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252482.1" /db_xref="GeneID:879123" /translation="MTTQRYLLDELETADMLEIDGLHAWRFELNENLLDQADLAAEAD QPFASEDWVLAVESLDGRTRREWRFSYNAVMEAEPQADGESWRLTTGEGAYQLRCLGA VSASGEDE" misc_feature complement(4252701..4252994) /locus_tag="PA3793" /note="Family of unknown function (DUF5629); Region: DUF5629; pfam18629" /db_xref="CDD:436634" gene complement(4253063..4253518) /locus_tag="PA3794" /db_xref="GeneID:879124" CDS complement(4253063..4253518) /locus_tag="PA3794" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252483.1" /db_xref="GeneID:879124" /translation="MNSDTENPFRPPEARLDEPDATHGEPLYRLSAIGLGTFIGTPLA GAFLAAVNLRRLGRAQEVGKTWLVGLCLFVLLPVLGAILPENIPSIGFTVAQIFGMVY YAKSAFGPALDSHKAAGGAFISNWRAAGIGLLFMLVVLSVAIPVVMLVV" gene 4253699..4254649 /locus_tag="PA3795" /db_xref="GeneID:879949" CDS 4253699..4254649 /locus_tag="PA3795" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_252484.1" /db_xref="GeneID:879949" /translation="MTTRKLGNSGLEIPALVFGGNVFGWTADESTSFRLLDALLDAGL NCIDTADVYSRWVPGHQGGESETLIGKWLKRTGKRDRMVIASKVGMDMGNGHKGLSAA YIEQALERSLRRLQTDYLDLYQSHTDDPHTDLEETLSTYGELIKKGKVRVIGASNYDA RRLLEARQVSARLNLPSYQSLQPEYNLYDRADYETNLEPTVEELGIGVISYYSLASGF LSGKYRNQADTAGRARGEKVKGYLNERGVAILAALDEVAEQYNANPTQVALAWLIARP TVTAPIASATSLEQLDDLIAATHLKLDEQAIHRLDSASAY" misc_feature 4253711..4254631 /locus_tag="PA3795" /note="AKR9C family of aldo-keto reductase (AKR); Region: AKR_AKR9C1; cd19081" /db_xref="CDD:381307" misc_feature order(4253753..4253761,4253840..4253842,4253855..4253857, 4253957..4253959,4254074..4254079,4254164..4254169, 4254242..4254244,4254329..4254349,4254491..4254493, 4254542..4254559,4254566..4254568,4254575..4254580) /locus_tag="PA3795" /note="putative active site [active]" /db_xref="CDD:381307" misc_feature order(4253840..4253842,4253855..4253857,4253957..4253959, 4254074..4254076) /locus_tag="PA3795" /note="catalytic tetrad [active]" /db_xref="CDD:381307" gene complement(4254737..4255324) /locus_tag="PA3796" /db_xref="GeneID:879950" CDS complement(4254737..4255324) /locus_tag="PA3796" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252485.1" /db_xref="GeneID:879950" /translation="MGLLDSILGSALGGSEGQGGARDPKVALLIGLVTMLMSRQGGAA QGGGDGGGLLGSLGSILGGAGGGAASGGLGGVLGDLLGGAAGGAGQAAPGVEAGSLGG LGGLFQMLQNAGLGDALNSWIGGGPNQSVSAADISRVFGDGQLQQLADSAGVSQGEAA EHLSSLLPELVNKLTPDGQAPQGDLDIGSLLARFS" misc_feature complement(4254776..>4255006) /locus_tag="PA3796" /note="YidB-like protein; Region: YidB; cl46788" /db_xref="CDD:481128" gene complement(4255458..4256252) /locus_tag="PA3797" /db_xref="GeneID:880241" CDS complement(4255458..4256252) /locus_tag="PA3797" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252486.1" /db_xref="GeneID:880241" /translation="MRDLTVLPDLDIALVQSSLVWHDAQANREHFAALLESAAGADLV VLPEMFTTGFSMASAEQAEPELGPTHAWLLEQARRLGAVVTGSLIVQLADGSHRNRLL WARPDGEMLHYDKRHLFRMAGEHEHYSPGERQELFELKGWRVRPLICYDLRFPVWSRD PHDTDLLLYTANWPAPRRQHWNRLLPARAIENLCYVVAVNRIGEDGNALRYAGDSQVL DFQGDSLFNAADADGVFRVRLDAAALAAYRQRFPAYMDADRFEIHP" misc_feature complement(4255470..4256225) /locus_tag="PA3797" /note="Xanthomonas campestris XC1258 and related proteins, members of the nitrilase superfamily (putative class 13 nitrilases); Region: Xc-1258_like; cd07575" /db_xref="CDD:143599" misc_feature complement(order(4255734..4255739,4255794..4255799, 4255803..4255808,4255881..4255883,4255896..4255898, 4255908..4255910,4256091..4256093,4256109..4256111)) /locus_tag="PA3797" /note="putative active site [active]" /db_xref="CDD:143599" misc_feature complement(order(4255806..4255808,4255908..4255910, 4256109..4256111)) /locus_tag="PA3797" /note="catalytic triad [active]" /db_xref="CDD:143599" misc_feature complement(order(4255470..4255490,4255494..4255505, 4255542..4255550,4255554..4255556,4255566..4255592, 4255596..4255598,4255680..4255685,4255689..4255697, 4255701..4255706,4255713..4255718,4255776..4255778, 4255782..4255796,4255803..4255805,4255890..4255892, 4255902..4255907)) /locus_tag="PA3797" /note="multimer interface [polypeptide binding]; other site" /db_xref="CDD:143599" misc_feature complement(order(4255470..4255490,4255494..4255505, 4255584..4255592,4255680..4255685,4255689..4255697, 4255701..4255706,4255713..4255718,4255776..4255778, 4255782..4255796,4255803..4255805,4255890..4255892, 4255902..4255907)) /locus_tag="PA3797" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143599" gene complement(4256240..4257388) /locus_tag="PA3798" /db_xref="GeneID:880242" CDS complement(4256240..4257388) /locus_tag="PA3798" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_252487.1" /db_xref="GeneID:880242" /translation="MIQSKLPNVGTTIFTRMSQLAAECGAINLSQGFPDFDGPPELRE AVGRHIAAGHNQYAPMTGLPALREQVAKKIEQFYGRRVSADSEVTITPGATEAIFSAI QALVHPGDEVVVLDPSYDSYEPSVQLAGGRCVHVPLALPDFSIDWQRMAEAIGPRTRL VIINTPHNPSGALISREELDRLAALIRDRDIYLISDEVYEHLVFDGVAHTSVLSHDEL YPRSFVVSSFGKTYHVTGWKTGYVVAPPALSAELRKVHQYVNFCGVTPLQWALADYMA GHPEHLRQLPGFYQAKRDLFCDLLLDSRFRFTRAPGTYFQCVDYSAIRPDLDDVAMAE WLTREHGVAAIPVSVFYEKAPDAMRLVRFCYAKREETLRQAAEKLCAI" misc_feature complement(4256243..4257388) /locus_tag="PA3798" /note="methionine aminotransferase; Validated; Region: PRK09082" /db_xref="CDD:181642" gene complement(4257696..4259177) /locus_tag="PA3799" /db_xref="GeneID:878229" CDS complement(4257696..4259177) /locus_tag="PA3799" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="GTPase Der" /protein_id="NP_252488.1" /db_xref="GeneID:878229" /translation="MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGE ARWQGRTYIVIDTGGISGDEEGIDAKMAEQSLQAIEEADAVLFLVDSRAGMTAADQMI AEHLRKRNKRSFLIANKVDTIDPDLARAEFSPLGLGDALPIAAAHGRGINHMLQEALG IFPKDNAEEEGEGEPASEEVAEGEEPTRIPGPSEKDGIKIAIIGRPNVGKSTLVNRML GEERVIVYDQAGTTRDSIYIPFERNEEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQA IQDANVVIFVMDAREGVVEHDLNLLGFVLETGRALVIALNKWDGMEAAERDYVKTELE RRLLFVDFADIHFISALHGTGVGHLYKSVQESFRSAVTRWPTSRLTSILEDAVQVHQP PMVNGRRIKLRYAHLGGANPPLIVIHGNQVDAVPKAYTRYLEKTYRRVLKLVGTPIRI EYKGGENPYEGKKNSLTARQVNKKRRLMSHHKKAEKKKKDKRR" misc_feature complement(4257804..4259177) /locus_tag="PA3799" /note="Double Era-like domain GTPase Der [Translation, ribosomal structure and biogenesis]; Region: Der; COG1160" /db_xref="CDD:440774" gene complement(4259255..4260397) /locus_tag="PA3800" /db_xref="GeneID:878230" CDS complement(4259255..4260397) /locus_tag="PA3800" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="outer membrane protein assembly factor BamB" /protein_id="NP_252489.1" /db_xref="GeneID:878230" /translation="MVQWKHAALLALALAVVGCSSNSKKELPPAELTDFKEEVVLSKQ WSRSVGDGQGDLYNLLEPAVDGSTIYAASAEGRVMAIQRETGDVLWKKDLERPVSGGV GVGYGLVLVGTLRGDVIALDEATGKKKWTKRVNSEVLSAPATNGDVVVVQTQDDKLIG LDAASGDQRWIYESTVPVLTLRGTGAPLIAGNMALAGLASGKVVAVDVQRGLPIWEQR VAIPQGRSELDRVVDIDGGLLLSGDTLYVVSYQGRAAALDVNSGRLLWQREASSYVGV AEGFGNIYVSQASGSVEGLDSRGASSLWNNDALARRQLSAPAVFSSNVVVGDLEGYVH LLSQVDGRFVGRERVDSDGVRVRPLVVGSWMYVFGNGGKLVAYTIR" misc_feature complement(4259261..4260346) /locus_tag="PA3800" /note="Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell wall/membrane/envelope biogenesis]; Region: PQQ; COG1520" /db_xref="CDD:441129" gene complement(4260399..4261043) /locus_tag="PA3801" /db_xref="GeneID:878329" CDS complement(4260399..4261043) /locus_tag="PA3801" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252490.1" /db_xref="GeneID:878329" /translation="MTSRTEDEDLAQIKDWWQRNGKPLVTGGILALAVVFGWQAWQKY QTNQAQGASIVYQQLIETALNPAGQPDPAKVAELAGKLKSEFGGTHYAQYGSLFVAKV AVDSGKLDDAVAELKAVMDKPADATLGELARQRLARVLAAQGKVEEGLKLLDGDADKA YVSTREELRGDLLVQLKRTDEARAAYEKAKQSLPEDGAGDALQIKLDDLSKGEA" misc_feature complement(4260417..4261034) /locus_tag="PA3801" /note="Putative negative regulator of RcsB-dependent stress response, UPF0070 family [Signal transduction mechanisms]; Region: YfgM; COG2976" /db_xref="CDD:442215" gene complement(4261070..4262359) /gene="hisS" /locus_tag="PA3802" /db_xref="GeneID:878330" CDS complement(4261070..4262359) /gene="hisS" /locus_tag="PA3802" /EC_number="6.1.1.21" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="histidine--tRNA ligase" /protein_id="NP_252491.1" /db_xref="GeneID:878330" /translation="MSKSLQAIRGMNDILPEQTPAWRYLERTFAGLLDGYGYSEIRLP ILEFTELFARGIGEGTDVVDKEMYTFLDRNGESLTMRPEGTAGCVRAVLEHGLSGGGQ VQKLWYTGPMFRYEKPQKGRYRQFHQIGVEVFNLPGPDIDAELIILTWRLWQKLGMAD AVTLQLNTLGSSEARARYREALVAYLQERFEQLDEDSQRRMTTNPLRILDSKVESTQA LLVGAPTLHDYLDEESIAHFEGLKARLDAVGLRYEINQKLVRGLDYYCRTAFEWVTDK LGAQGTVCGGGRYDGLVSQFGGKPTPGVGFAMGVERLVLLLETLGVIPAELNRPADLY VCAFGEPAELAALTLAEQLRSAIPGIRLLVNAGAGSFKSQFKKADKSGARFALILGED EVANRVVGFKPLRDEGEQQSIAWDALPEHLAACLAQA" misc_feature complement(4261076..4262356) /gene="hisS" /locus_tag="PA3802" /note="Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: HisS; COG0124" /db_xref="CDD:439894" gene complement(4262378..4263493) /gene="gcpE" /locus_tag="PA3803" /db_xref="GeneID:879053" CDS complement(4262378..4263493) /gene="gcpE" /locus_tag="PA3803" /EC_number="1.17.7.1" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)" /protein_id="NP_252492.1" /db_xref="GeneID:879053" /translation="MSIHSASPIIRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVA ATVAQIRRLEDAGADIVRVSVPDMDAAEAFGKIKQQVNVPLVADIHFDYRIALRVAEL GVDCLRINPGNIGREDRVKAVVDAARERNIPIRIGVNAGSLEKDLQKKYGEPTPEALL ESAMRHVDHLDKLDFQNFKVSVKASDVFMAVAAYRLLARQIEQPLHLGITEAGGLRSG TVKSAVGLGMLLAEGIGDTIRISLAADPVEEIKVGFDILKSLHLRSRGINFIACPSCS RQNFDVVKTMNELEGRLEDLLVPMDVAVIGCVVNGPGEAKEAHVGLTGGTPNLVYIDG KPSQKLTNDNLVDELERLIRQKAAEKAEADASLIARG" misc_feature complement(4262429..4263484) /gene="gcpE" /locus_tag="PA3803" /note="flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase; Region: ispG; PRK00366" /db_xref="CDD:234737" gene complement(4263490..4264533) /locus_tag="PA3804" /db_xref="GeneID:879054" CDS complement(4263490..4264533) /locus_tag="PA3804" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252493.1" /db_xref="GeneID:879054" /translation="MMKAPQPEVVATASRQNPGETLRQAREQKGLSLSQVAGQLNLTE NSLRQLENGAFDKLPGHTFSRGYIRAYAKLMGLDQAELVNSFDHFTGTNASGSTVQSL GRVAEPVRLSRNVLRIVSLLLLALLIGFGYFWWQEHSARTPETAGLSLEHVEVESADG TTEIHTLDEPEDQAVIEAQKEGEQAPAEVSPEVAAQAEGAPPVASEGAQVPAAPAQGT PAAPQQPVTAAPAGTAPAPGTAPAVPATASPAAPPAPSEPAAAPVVAGEGQGVVKVQF VADCWTQVTDANGKVLVSALKRKGDSLELAGKAPLELRLGFARGAQVSYNGQPVDVTP FVRGETARLKVGQ" misc_feature complement(4263496..4264482) /locus_tag="PA3804" /note="cytoskeleton protein RodZ; Region: PRK10856" /db_xref="CDD:236776" gene complement(4264530..4265288) /gene="pilF" /locus_tag="PA3805" /db_xref="GeneID:879170" CDS complement(4264530..4265288) /gene="pilF" /locus_tag="PA3805" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein PilF" /protein_id="NP_252494.1" /db_xref="GeneID:879170" /translation="MTVRAALVFLLAVGLTGCVTSGDQNPLKTDKGRDEARDAYIQLG LGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDS RNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQA KEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRL AKVFEDRDTAASYGLQLKRLYPGSLEYQEFQAEK" misc_feature complement(4264569..4265276) /gene="pilF" /locus_tag="PA3805" /note="type IV pilus biogenesis/stability protein PilW; Region: type_IV_pilW; TIGR02521" /db_xref="CDD:131573" misc_feature complement(order(4264938..4264940,4264947..4264952, 4264959..4264964,4264971..4264973,4265040..4265045, 4265049..4265054,4265061..4265066,4265073..4265075, 4265145..4265147,4265151..4265156,4265163..4265168, 4265175..4265177)) /gene="pilF" /locus_tag="PA3805" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature complement(4265094..4265177) /gene="pilF" /locus_tag="PA3805" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(4264989..4265081) /gene="pilF" /locus_tag="PA3805" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(4264896..4264976) /gene="pilF" /locus_tag="PA3805" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(4264779..4264871) /gene="pilF" /locus_tag="PA3805" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(4264692..4264766) /gene="pilF" /locus_tag="PA3805" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" protein_bind complement(4264658..4264670) /gene="pilF" /locus_tag="PA3805" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(4264699..4264711) /gene="pilF" /locus_tag="PA3805" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(4265306..4266445) /locus_tag="PA3806" /db_xref="GeneID:879171" CDS complement(4265306..4266445) /locus_tag="PA3806" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN" /protein_id="NP_252495.1" /db_xref="GeneID:879171" /translation="MTTTTAGKVNLLGLTQPQLEQFFESIGEKRFRAGQVMKWIHHFG VDDFDAMTNVGKALREKLKASAEIRGPEIVSQDISADGTRKWVVRVASGSCVETVYIP QGGRGTLCVSSQAGCALDCSFCSTGKQGFNSDLTAAEVIGQVWIANKSFGTVPAKIDR AITNVVMMGMGEPLLNFDNVVAAMNIMMDDLGYGISKRKVTLSTSGVVPMIDKLGEVI DVSLALSLHAPNDELRNKLVPINKKYPLGMLLDACRRYISRLGEKRVLTVEYTLLKDV NDQPEHAEQMIALLKDTPCKINLIPFNPFPHSGYERPSNNAIRRFQDMLHKGGFNVTV RTTRGDDIDAACGQLVGQVMDRTRRSERYIAVRQLAESESAANRN" misc_feature complement(4265387..4266415) /locus_tag="PA3806" /note="Adenine C2-methylase RlmN of 23S rRNA A2503 and tRNA A37 [Translation, ribosomal structure and biogenesis]; Region: RlmN; COG0820" /db_xref="CDD:440582" gene complement(4266470..4266901) /gene="ndk" /locus_tag="PA3807" /db_xref="GeneID:879892" CDS complement(4266470..4266901) /gene="ndk" /locus_tag="PA3807" /EC_number="2.7.4.6" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="nucleoside diphosphate kinase" /protein_id="NP_252496.1" /db_xref="GeneID:879892" /translation="MALQRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSE REAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGT IRADFAVSIDENAVHGSDSEASAAREIAYFFAATEVCERIR" misc_feature complement(4266479..4266898) /gene="ndk" /locus_tag="PA3807" /note="Nucleoside diphosphate kinase [Nucleotide transport and metabolism]; Region: Ndk; COG0105" /db_xref="CDD:439875" gene complement(4267145..4267345) /locus_tag="PA3808" /db_xref="GeneID:879893" CDS complement(4267145..4267345) /locus_tag="PA3808" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252497.1" /db_xref="GeneID:879893" /translation="MSLKWTDVLEIAIQLDESKPEVDPRYVNFVDLRRWVVELPEFSD DPQRSGEKVLEAIQAAWIEERD" misc_feature complement(4267148..4267339) /locus_tag="PA3808" /note="Fe-S-cluster formation regulator IscX/YfhJ [Posttranslational modification, protein turnover, chaperones]; Region: IscX; COG2975" /db_xref="CDD:442214" gene complement(4267372..4267710) /gene="fdx2" /locus_tag="PA3809" /db_xref="GeneID:879944" CDS complement(4267372..4267710) /gene="fdx2" /locus_tag="PA3809" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="(2Fe-2S) ferredoxin" /protein_id="NP_252498.1" /db_xref="GeneID:879944" /translation="MPQIVILPHADHCPEGAVFEAKPGETILDAALRNGIEIEHACEK SCACTTCHVIVREGLDSMEPSDELEDDMLDKAWGLEPDSRLSCQAVVADEDLVVEIPK YTINQVSEGH" misc_feature complement(4267381..4267707) /gene="fdx2" /locus_tag="PA3809" /note="ferredoxin, 2Fe-2S type, ISC system; Region: fdx_isc; TIGR02007" /db_xref="CDD:131062" misc_feature complement(order(4267450..4267455,4267558..4267569, 4267576..4267578,4267585..4267587,4267594..4267599)) /gene="fdx2" /locus_tag="PA3809" /note="catalytic loop [active]" /db_xref="CDD:238126" misc_feature complement(order(4267450..4267452,4267558..4267560, 4267567..4267569,4267585..4267587)) /gene="fdx2" /locus_tag="PA3809" /note="iron binding site [ion binding]; other site" /db_xref="CDD:238126" gene complement(4267717..4269576) /gene="hscA" /locus_tag="PA3810" /db_xref="GeneID:879936" CDS complement(4267717..4269576) /gene="hscA" /locus_tag="PA3810" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="chaperone protein HscA" /protein_id="NP_252499.1" /db_xref="GeneID:879936" /translation="MALLQIAEPGQSPKPHERRLAVGIDLGTTNSLVAAVRSGVAEPL PDAQGRLILPSAVRYHAERAEVGESARAAAAEDPFNTVISVKRLMGRGLEDVKQLGEQ LPYRFRQGESHMPFIETVQGLKSPVEVSADILRELRQRAETTLGGELVGAVITVPAYF DDAQRQATKDAARLAGLNVLRLLNEPTAAAVAYGLDKGAEGLVAIYDLGGGTFDISIL RLTRGVFEVLATGGDTALGGDDFDHAIAGWVIEQAGLSADLDPGSQRQLLQIACAAKE RLTDEASVRVAYGDWSGELSRATLDELIEPFVARSLKSCRRAVRDSGVDLEEIRSVVM VGGSTRVPRVRTAVGELFGCEPLTDIDPDQVVAIGAAIQADALAGNKRGEELLLLDVI PLSLGLETMGGLMEKVIPRNTTIPVARAQEFTTYKDGQTAMMIHVLQGERELVKDCRS LARFELRGIPPMVAGAAKIRVTFQVDADGLLGVSARELSSGVEASIQVKPSYGLTDGE IARMLKDSFDYAGDDKAARALREQQVEAQRLLEAVQSALDVDGERLLDEEERLAIAAQ MDTLRELAGGSDTAAIENQIKRLSQVTDAFAARRMDATVKAALSGRRLNEIEE" misc_feature complement(4267726..4269576) /gene="hscA" /locus_tag="PA3810" /note="chaperone protein HscA; Provisional; Region: hscA; PRK05183" /db_xref="CDD:235360" gene complement(4269619..4270140) /gene="hscB" /locus_tag="PA3811" /db_xref="GeneID:879937" CDS complement(4269619..4270140) /gene="hscB" /locus_tag="PA3811" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="co-chaperone HscB" /protein_id="NP_252500.1" /db_xref="GeneID:879937" /translation="MGKPCHFAQFDLQPAFLVDLDELGQRYRELVRSVHPDRFADAPE REQRLALERAAQLNEAYQTLKSAPRRALYLLTLSGHELPLEATVQDPEFLLQQMQLRE ELEELQDSADLAGVATFKRRLKAAQAELEREFAACWDDAQRREEAERLVRRMQFLDKL AQEVRQLEERLDD" misc_feature complement(4269622..4270140) /gene="hscB" /locus_tag="PA3811" /note="co-chaperone HscB; Provisional; Region: hscB; PRK00294" /db_xref="CDD:166894" gene complement(4270148..4270471) /gene="iscA" /locus_tag="PA3812" /db_xref="GeneID:879916" CDS complement(4270148..4270471) /gene="iscA" /locus_tag="PA3812" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="iron-binding protein IscA" /protein_id="NP_252501.1" /db_xref="GeneID:879916" /translation="MAISMTEAAAKHVQRSLEGRGKGEGIRLGVRTTGCSGLAYVLEF VDELAAEDLVFESHGVKVIIDPKSLVYLDGTELDFTREGLNEGFKFNNPNVRGECGCG ESFNV" misc_feature complement(4270151..4270471) /gene="iscA" /locus_tag="PA3812" /note="Iron-sulphur cluster biosynthesis; Region: Fe-S_biosyn; cl00400" /db_xref="CDD:444888" gene complement(4270499..4270885) /gene="iscU" /locus_tag="PA3813" /db_xref="GeneID:879917" CDS complement(4270499..4270885) /gene="iscU" /locus_tag="PA3813" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="scaffold protein" /protein_id="NP_252502.1" /db_xref="GeneID:879917" /translation="MAYSEKVIDHYENPRNVGKLDAADPNVGTGMVGAPACGDVMRLQ IKVNEQGVIEDAKFKTYGCGSAIASSSLATEWMKGKTLDEAETIKNTTIAEELALPPV KIHCSVLAEDAIKAAVRDYKQKKGLL" misc_feature complement(4270508..4270879) /gene="iscU" /locus_tag="PA3813" /note="FeS cluster assembly scaffold IscU; Region: iscU; TIGR01999" /db_xref="CDD:188192" misc_feature complement(order(4270568..4270573,4270577..4270582, 4270691..4270693,4270697..4270699,4270772..4270777, 4270859..4270864,4270871..4270879)) /gene="iscU" /locus_tag="PA3813" /note="trimerization site [polypeptide binding]; other site" /db_xref="CDD:143480" misc_feature complement(order(4270568..4270570,4270697..4270699, 4270775..4270777)) /gene="iscU" /locus_tag="PA3813" /note="active site" /db_xref="CDD:143480" gene complement(4270921..4272135) /gene="iscS" /locus_tag="PA3814" /db_xref="GeneID:879918" CDS complement(4270921..4272135) /gene="iscS" /locus_tag="PA3814" /EC_number="2.8.1.7" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cysteine desulfurase" /protein_id="NP_252503.1" /db_xref="GeneID:879918" /translation="MKLPIYLDYSATTPVDPRVAQKMSECLLMDGNFGNPASRSHVFG WKAEEAVENARRQVAELVNADPREIVWTSGATESDNLAIKGVAHFYSGKGKHIITSKI EHKAVLDTCRQLEREGFEVTYLEPGEDGLITPALVEAALRDDTILVSVMHVNNEIGTV NDIAAIGELTRSRGVLFHVDAAQSTGKVEIDLDKLKVDLMSFSAHKTYGPKGIGALYV RRKPRVRIEGQMHGGGHERGMRSGTLATHQIVGMGEAFRIAKEEMAQENARVLALRDR FFAQIDGLEELYINGSMTSRVPHNLNVSFNYVEGESLIMALKDLAVSSGSACTSASLE PSYVLRALGRNDELAHSSIRFTFGRFTTEEEIDYAAKKVVEAVSKLRELSPLWDMYKE GVDLSQVEWQAH" misc_feature complement(4270924..4272135) /gene="iscS" /locus_tag="PA3814" /note="IscS subfamily cysteine desulfurase; Region: PRK14012" /db_xref="CDD:184450" misc_feature complement(order(4271518..4271520,4271527..4271529, 4271587..4271589,4271596..4271598,4271680..4271682, 4271899..4271901,4271908..4271913)) /gene="iscS" /locus_tag="PA3814" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99746" misc_feature complement(4271518..4271520) /gene="iscS" /locus_tag="PA3814" /note="catalytic residue [active]" /db_xref="CDD:99746" gene complement(4272165..4272656) /gene="iscR" /locus_tag="PA3815" /db_xref="GeneID:879919" CDS complement(4272165..4272656) /gene="iscR" /locus_tag="PA3815" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="HTH-type transcriptional regulator" /protein_id="NP_252504.1" /db_xref="GeneID:879919" /translation="MRLTTKGRYAVTAMLDLALHAQQGPVSLADISERQGISLSYLEQ LFAKLRRGNLVTSVRGPGGGYQLSRHMSGIHVAQVIDAVNESVDATRCQGQGDCHSGD TCLTHHLWCDLSLQIHEFLSGISLADLVSRQEVQEVALRQDERRCSGKTPRLDKIEAS AID" misc_feature complement(4272252..4272656) /gene="iscR" /locus_tag="PA3815" /note="iron-sulfur cluster assembly transcription factor IscR; Region: IscR; TIGR02010" /db_xref="CDD:273927" misc_feature complement(order(4272432..4272434,4272567..4272569, 4272576..4272578)) /gene="iscR" /locus_tag="PA3815" /note="putative Zn2+ binding site [ion binding]; other site" /db_xref="CDD:238042" gene complement(4272801..4273577) /gene="cysE" /locus_tag="PA3816" /db_xref="GeneID:879926" CDS complement(4272801..4273577) /gene="cysE" /locus_tag="PA3816" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="O-acetylserine synthase" /protein_id="NP_252505.1" /db_xref="GeneID:879926" /translation="MFERVREDIQSVFHRDPAARNALEVLTCYPGLHAVWLHRLAHGL WTSGWKWLARLVSNFGRWMTGIEIHPGARIGRRFFIDHGMGIVIGETAEIGDDVTLYQ GVTLGGTTWNKGKRHPTLGNNVVVGAGAKVLGPFTVGEGAKVGSNAVVTKEVPPGATV VGIPGRIIMREDSEQQAKRQAMAEKLGFDAYGVSQDMPDPVARAIGQLLDHLQAVDGR LEGMCQALTALGSDYCAKDLPVLREEDFAGVKDEDGNPAA" misc_feature complement(4273056..4273577) /gene="cysE" /locus_tag="PA3816" /note="Serine acetyltransferase [Amino acid transport and metabolism]; Region: CysE; COG1045" /db_xref="CDD:440667" gene complement(4273577..4274350) /locus_tag="PA3817" /db_xref="GeneID:879927" CDS complement(4273577..4274350) /locus_tag="PA3817" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="methyltransferase" /protein_id="NP_252506.1" /db_xref="GeneID:879927" /translation="MLDRIRVVLVNTSHPGNIGGAARAMKNMGLSQLVLVQPESFPHG DAVARASGATDILDAARVVDTLEEALIGCSVVLGTSARDRRIPWPLLDPRECATTCLE HLEANGEVALVFGREYAGLTNEELQRCQFHVHIPSDPEFGSLNLAAAVQVLTYEVRMA WLAAQGKPTKMEKFESTSMLNTELVTADELELYYAHLERTLIDIGFLDPEKPRHLMSR LRRLYGRSAISKLEMNILRGILTETQKVARGLSYKRSDD" misc_feature complement(4273607..4274347) /locus_tag="PA3817" /note="tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase [Translation, ribosomal structure and biogenesis]; Region: TrmJ; COG0565" /db_xref="CDD:440331" protein_bind 4274440..4274452 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3818" /bound_moiety="AmrZ" gene 4274502..4275317 /locus_tag="PA3818" /db_xref="GeneID:879908" CDS 4274502..4275317 /locus_tag="PA3818" /note="PMID:24169572" /codon_start=1 /transl_table=11 /product="type III secretion system regulator SuhB" /protein_id="NP_252507.1" /db_xref="GeneID:879908" /translation="MQPMLNIALRAARSAGELIFRSIERLDVISVNEKDAKDYVTEVD RAAEQTIVAALRKAYPTHAIMGEEGGFIEGSGEGADYLWVIDPLDGTTNFIHGVPHFA VSIACKYKGRLEHAVVLDPVRQEEFTASRGRGAALNGRRLRVSGRKSLEGALLGTGFP FRDNQIDNLDNYLNMFRSLVGQTAGIRRAGAASLDLAYVAAGRYDAFWEFGLSEWDMA AGALLVQEAGGLVSDFTGSHEFLEKGHIVAGNTKCFKALLTTIQPHLPPSLKR" misc_feature 4274511..4275251 /locus_tag="PA3818" /note="inositol monophosphatase and related domains. A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be recycled...; Region: IMPase; cd01639" /db_xref="CDD:238817" misc_feature order(4274601..4274603,4274613..4274615,4274631..4274633, 4274700..4274705,4274757..4274774,4275144..4275149) /locus_tag="PA3818" /note="active site" /db_xref="CDD:238817" misc_feature order(4274610..4274612,4274616..4274618,4274775..4274780, 4274784..4274801,4274955..4274963,4274967..4274969, 4274973..4274978,4275006..4275011,4275018..4275020, 4275027..4275032,4275039..4275041,4275051..4275071, 4275093..4275095,4275105..4275116) /locus_tag="PA3818" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:238817" gene complement(4275422..4275970) /locus_tag="PA3819" /db_xref="GeneID:879909" CDS complement(4275422..4275970) /locus_tag="PA3819" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252508.1" /db_xref="GeneID:879909" /translation="MNKSMLVGAVLGAVGVTAGGAVATYSLVDRGPDYAEVVAVQPVK ETIKTPRQVCKDVAVTRQRPVKDQHQIAGTAIGAVVGGLLGNQIGGGTGKKIATVAGA VGGGYAGNKVQEGMQERDTYTTTETRCSTVHDSSEKVVGYDVKYMLDGKAGQIRMERD PGSQIPVDKNGRLILSQGETLR" misc_feature complement(4275443..4275952) /locus_tag="PA3819" /note="hypothetical protein; Provisional; Region: PRK11280" /db_xref="CDD:183072" gene complement(4276154..4277074) /gene="secF" /locus_tag="PA3820" /db_xref="GeneID:879904" CDS complement(4276154..4277074) /gene="secF" /locus_tag="PA3820" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecF" /protein_id="NP_252509.1" /db_xref="GeneID:879904" /translation="MNIKIGTINFMGIRNVAFAVTLILTVIALGSWFTKGINFGLDFT GGTLIELTYEQPADLGKVRGQLVGAGYEDAVVQSFGDARDVLVRMPSEDPELGKKVAT ALQQADAGNPANLKRVEYVGPQVGEELRDQGGLGMLLALGGILLYVGFRFQWKFALGA ILSLVHDAIIVMGVLSFFQVTFDLTVLAAVLAVVGYSLNDTIVIFDRVRENFRVLRKA DLVENLNISTSQTLLRTIATSVSTLLAIAALLFFGGDNLFGFSIALFVGVMAGTYSSI YIANVVLIWLNLTSEDLIPPQAKDTVDDRP" misc_feature complement(4276211..4277056) /gene="secF" /locus_tag="PA3820" /note="Preprotein translocase subunit SecF [Intracellular trafficking, secretion, and vesicular transport]; Region: SecF; COG0341" /db_xref="CDD:440110" gene complement(4277085..4278947) /gene="secD" /locus_tag="PA3821" /db_xref="GeneID:878279" CDS complement(4277085..4278947) /gene="secD" /locus_tag="PA3821" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecD" /protein_id="NP_252510.1" /db_xref="GeneID:878279" /translation="MLNKYPLWKYLLILAVLAVGFIYSAPNLYPDDPAVQISGASTAL QVTQADVDRAAKALTDAGIAVKADSLSKKGGLIRLVKQDDQLPAKEVVRRTLGDDYVV ALNLAQTTPEWLRKLGGSPMKLGLDLSGGVHFLLEVDMDKAVDARLKVYESEVKSLLR KERVRYRSLPIQDRAIQLGFTDSESLDKARSLIAKDFRDFEVVPEERNGLQVLRVALT QAKLAEIREYSIKQNLTTVRNRVNELGVSEPLVQRQGANRIVVELPGVQDTAEAKRIL GKTANLEFRLAAEPDALKSATETFEFREPRRPPVPLERGVIITGDQVTDASASFDENG RPQVNIRLDGHGGELMNRATRNNVGRSMAVVFIEQKPVTRYTKQMVDGVEKEVAVPAF KEEKQIISLATIQSPLGNQFRITGLDGPGESSELALLLRAGGLAAPMYFAEERTIGPS LGADNIAKGIDASLWGMLFVSLFIIVIYRFFGVIATVALAFNMVMLVALMSILGATLT LPGIAGIVLTMGMAVDANVLIFSRIREELANGMSVQRAIHEGFNRAFTAILDANLTSL LVGGILYAMGTGPVKGFAVTMSLGIITSMFTAIMVTRAMVNLIFGGRDFKKLWI" misc_feature complement(4278636..4278944) /gene="secD" /locus_tag="PA3821" /note="SecD export protein N-terminal TM region; Region: SecD-TM1; pfam13721" /db_xref="CDD:463968" misc_feature complement(4277088..4278926) /gene="secD" /locus_tag="PA3821" /note="preprotein translocase subunit SecD; Reviewed; Region: secD; PRK05812" /db_xref="CDD:235615" gene complement(4279007..4279345) /locus_tag="PA3822" /db_xref="GeneID:878280" CDS complement(4279007..4279345) /locus_tag="PA3822" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit YajC" /protein_id="NP_252511.1" /db_xref="GeneID:878280" /translation="MSFLIPAAYADAAAPAAAGPAGTGFEWVFLVGFLVIFYLMIWRP QAKRAKEHKNLLGNLQKGDEVVTSGGIAGKVTKVADDFVVVEVSDNVELKFQKAAIAA TLPKGTLKAI" misc_feature complement(4279010..4279267) /locus_tag="PA3822" /note="preprotein translocase subunit YajC; Validated; Region: yajC; PRK05585" /db_xref="CDD:235518" gene complement(4279389..4280507) /gene="tgt" /locus_tag="PA3823" /db_xref="GeneID:879886" CDS complement(4279389..4280507) /gene="tgt" /locus_tag="PA3823" /EC_number="2.4.2.29" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="queuine tRNA-ribosyltransferase" /protein_id="NP_252512.1" /db_xref="GeneID:879886" /translation="MNFELLATDGKARRGRLTFPRGVVETPAFMPVGTYGTVKGMLPR DIEDIGAQIILGNTFHLWLRPGTEVIQRHGDLHDFMQWKGPILTDSGGFQVFSLGAMR KIKEEGVTFASPVDGAKVFMGPEESMAVQRALGSDIVMIFDECTPYPADHDVAKRSME LSLRWAKRSKIAHGDSPSALFGIVQGGMHEDLRLRSLDGLQEIGFDGLAIGGLSVGEP KEEMIRVLDFLPPQMPADKPRYLMGVGKPEDLVEGVRRGVDMFDCVMPTRNARNGHLF VDSGVIKIRNSVHKHDDSTLDPTCDCYTCKHFSRAYLHHLDKCGEMLGSMLNTIHNLR HYQRVMAGLREAIQQGTLAAFVDAFYAKRGLPTPPLDA" misc_feature complement(4279416..4280507) /gene="tgt" /locus_tag="PA3823" /note="Queuine/archaeosine tRNA-ribosyltransferase [Translation, ribosomal structure and biogenesis]; Region: Tgt; COG0343" /db_xref="CDD:440112" gene complement(4280520..4281563) /gene="queA" /locus_tag="PA3824" /db_xref="GeneID:879887" CDS complement(4280520..4281563) /gene="queA" /locus_tag="PA3824" /EC_number="5.-.-.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine--tRNA ribosyltransferase-isomerase" /protein_id="NP_252513.1" /db_xref="GeneID:879887" /translation="MRVADFHFDLPEALIARHPLPERRASRLLALDGPTGTLAHRQFA DLLDYLRPGDLMVFNNTRVIPARLFGQKESGGKLEVLVERVLDQHRVLAHIRASKAPK PGTRILVEGGGSAEMLQRHDALFELAFAEPVLPLLERVGHMPLPPYIDRPDDAADRER YQTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIED HVMHREWLEVGQDVVDAVSVCRARGGRVVAVGTTSVRSLESAARDGELKPFSGDTDIF IYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDAM FITRNPAPRGPED" misc_feature complement(4280553..4281563) /gene="queA" /locus_tag="PA3824" /note="S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional; Region: queA; PRK00147" /db_xref="CDD:234666" gene 4281665..4281751 /locus_tag="PA3824.1" /db_xref="GeneID:3240226" tRNA 4281665..4281751 /locus_tag="PA3824.1" /product="tRNA-Leu" /db_xref="GeneID:3240226" gene complement(4282078..4283658) /locus_tag="PA3825" /db_xref="GeneID:879846" CDS complement(4282078..4283658) /locus_tag="PA3825" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252514.1" /db_xref="GeneID:879846" /translation="MPIPVKRARRKALRLSLSVLVGVMPIVLGLLILYWQAERSLQET SEQAAGNAVRQFERMLDNAALAARKVMPVAGRPCPEAELALREQVAIMPFVRSVNLTR DNTIYCTSLFGGFDEPVRIENYVDGRLLLMPGNQVTPDAALLVLRDFDGKRGVLAAID GRYLSYVLDLVDRRSRQVLVVGPNWLDAEGRTHRDAPPTYEVAAVSLASQRYPLRVLS GFPEGEEWRSIRSQNPAMFGLLLFFGLLAGTLCYWLSRRVASPSSELRRALEANEFIP YYQPLSPGQGGRWIGVEVLMRWRHPREGLIRPDLFIPFAERSGLIVPMTRALMRQVAE DLGGHAGKLEPGFHIGFNISATHCHELALVDDCRELLAAFPPGHITLVLELTERELIE SSEVTDRLFDELHALGVKIAIDDFGTGHSSLAYLRKFQVDCLKIDQSFVARIGIDTLS GHILDSIVELSAKLDLDIVAEGVETPEQRDYLAARGVDYLQGYLIGRPMPLESLLSSL TVQEGQGASVVALPADRG" misc_feature complement(4282132..4283649) /locus_tag="PA3825" /note="Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains [Signal transduction mechanisms]; Region: YjcC; COG4943" /db_xref="CDD:443970" protein_bind complement(4283385..4283397) /locus_tag="PA3825" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3825" /bound_moiety="AmrZ" gene 4283788..4284285 /locus_tag="PA3826" /db_xref="GeneID:879871" CDS 4283788..4284285 /locus_tag="PA3826" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252515.1" /db_xref="GeneID:879871" /translation="MPKHMLSPQGDYAPAGLIRRLAAMFYDFLLCVALMMVVTLVYQQ GILRLIYGSDHLRELADRGALIGDPLLSTLLVFALFGFFAKFWTHNGQTLGMQVWGLR VQNRDGSAISLLQALLRFMIAIASWLCLGLGFLWMLWDKDKRTWHDRYSESQVVRLPK NTHKK" misc_feature 4283806..4284261 /locus_tag="PA3826" /note="Uncharacterized membrane protein YckC, RDD family [Function unknown]; Region: YckC; COG1714" /db_xref="CDD:441320" gene complement(4284417..4285484) /locus_tag="PA3827" /db_xref="GeneID:879872" CDS complement(4284417..4285484) /locus_tag="PA3827" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252516.1" /db_xref="GeneID:879872" /translation="MVKLDRYIGVTVFVAILAVLGVILGLALLFAFIDELNDISASYG IGDALRFIFLTAPRRAYDMLPMAALIGCLVGLGTLASNSELTIMRAAGVSLSRIVWAV MKPMLVLMLAGILVGEYVAPWTENIAQSGRALAQGGGDSQSSKRGLWHRQGREYIHIN AVQPNGVLYGVTRYRFDEQRGLESASFAKRARFETDHWQLEEVTTTLLHPREKRSEVV KLPTERWDAQLSPQLLNTVVMEPEALSISGLWQYIHYLADQGLNNNRYWLAFWTKVLQ PLVTAALVLMAISFIFGPLRSVTLGQRIFTGVLVGFVFRIAQDLLGPSSLVFDFPPLL AVVIPASICALAGVWLLRRAG" misc_feature complement(4284423..4285478) /locus_tag="PA3827" /note="LPS export ABC transporter permease LptG; Region: LptG_lptG; TIGR04408" /db_xref="CDD:275201" gene complement(4285477..4286595) /locus_tag="PA3828" /db_xref="GeneID:879878" CDS complement(4285477..4286595) /locus_tag="PA3828" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252517.1" /db_xref="GeneID:879878" /translation="MIVFRYLSREVLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGLLD PGSLFLIMAFRIPGFLQLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQKRLLGYT MAPALLVAILVAWLSLFLAPQGINQFALLLNKQDTLTEFDTLVPGRFQAMRDGTRVTY TEELSKDRGELAGIFISQKDLNSSNQERGISILVAEKGTQNIQADGSRYLILHNGYRY DGNPGQANYRAIQYDTYGVMLPKPEASSEVSERDAVPTADLFGSDNPRYQAELQWRLS TPLLVFVVTLLAVPLSRVNPRQGRFLKLLPAILLYMGYLALLIAVRGQLDKGKIPMAI GLWWVHGLFLAIGLLLFYWEPLRLKLASSRAGREVAHG" misc_feature complement(4285540..4286589) /locus_tag="PA3828" /note="LPS export ABC transporter permease LptF; Region: LptF_YjgP; TIGR04407" /db_xref="CDD:275200" gene complement(4286787..4287710) /locus_tag="PA3829" /db_xref="GeneID:879879" CDS complement(4286787..4287710) /locus_tag="PA3829" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252518.1" /db_xref="GeneID:879879" /translation="MQRLNVEFRSEGVALRGWLYLPEARAERPAIVMTHGFSGVKEQY LDRYAEVFAAAGFVVLLYDHPNFGDSDGEPRQEIDPVMQRRGYRDAITWLGAQARVDA SRIGIWGTSYSGGHVLEVAALDRRVKCVVAQVPTVSGHASALRRTRAEQLPALLASFD ADRQRRFEGLPPALLPAVAASPDEPCAMAGADAHRFFTDSAALAPNWCNRVTLRSAEL ARENEPGIHIGRISPTPLLMIVADRDLLTPTDLCLEAYQRALPPKRLLMLAGGHFTPY IEHFDATSQAAADWFVRHLGEGGEQPATVVE" misc_feature complement(4286826..4287695) /locus_tag="PA3829" /note="Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; Region: FrsA; COG1073" /db_xref="CDD:440691" gene complement(4287794..4288606) /locus_tag="PA3830" /db_xref="GeneID:879864" CDS complement(4287794..4288606) /locus_tag="PA3830" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252519.1" /db_xref="GeneID:879864" /translation="MPASKPVADPARSTDPRDYQRVGRPLGVMAKTFPAGFVVAEHRH ERAQLIHALSGVIELHVGRTLWLVPPQRAVWMPAGMAHAMLARGEVRLHTVYVRPQSC PPEFPRVPRGVMVSPLLRELIVRAAGLPLLYDERGREGRLMAVLLDELEWSREQPLAL PDPADRRLGRVCQALLENPADPRGLEEWARYVGASSRTLARLFLSELGVTFVHWRHQV RLAAALPRLAAGEAVARIAVDLGYQTPSAFSAMFRRLTGSTPSRYFALSDSA" misc_feature complement(4288244..4288525) /locus_tag="PA3830" /note="AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain; Region: cupin_NimR-like_N; cd06124" /db_xref="CDD:380379" misc_feature complement(4287812..4288045) /locus_tag="PA3830" /note="Helix-turn-helix domain; Region: HTH_18; pfam12833" /db_xref="CDD:432818" gene 4288943..4290430 /gene="pepA" /locus_tag="PA3831" /db_xref="GeneID:879865" CDS 4288943..4290430 /gene="pepA" /locus_tag="PA3831" /EC_number="3.4.11.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="leucyl aminopeptidase" /protein_id="NP_252520.1" /db_xref="GeneID:879865" /translation="MEFLVKSVRPETLKTATLVLAVGEGRKLGASAKAVDDATGGAIS AVLKRGDLAGKVGQTLLLQSLPNLKAERVLLVGAGKERELGDRQYRKLASAVLSTLKG LAGADAALALGDLAVKGRDAHAKARLLVETLADGLYVFDRYKSQKAEPLKLKKLTLLA DKADSAAVEQGSKEAQAIANGMALTRDLGNLPPNVCHPTFLGEQAKGLAKEFKGLKVE VLDEKKLRELGMGSFLAVAQGSDQPPRLIVLQYNGAKKDQAPHVLVGKGITFDTGGIS LKPGLGMDEMKFDMCGAASVFGTFRAVLELQLPINLVGLLACAENMPSGGATRPGDIV TTMSGQTVEILNTDAEGRLVLCDALTYAERFKPQSVIDIATLTGACIVALGSNTSGLM GNNEALVRQLLKAGEFADDRAWQLPLFDEYQEQLDSPFADIANIGGPKAGTITAGCFL SRFAKKYHWAHLDIAGTAWISGGKDKGATGRPVPLLTQYLLERAK" misc_feature 4288943..4290418 /gene="pepA" /locus_tag="PA3831" /note="multifunctional aminopeptidase A; Provisional; Region: PRK00913" /db_xref="CDD:234863" gene 4290427..4290855 /gene="holC" /locus_tag="PA3832" /db_xref="GeneID:879882" CDS 4290427..4290855 /gene="holC" /locus_tag="PA3832" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit chi" /protein_id="NP_252521.1" /db_xref="GeneID:879882" /translation="MTRVDFYVIPSADPSARLQVACRLAEKAWRQGMQVYLHCADEAQ RSELDGRLWSFRGEAFIPHSLAEEDAEAPVALGLGEPPGNHRDLLINLTLEAPGFVPN FSRVAELVVEEPAIRQAARDKFRFYREQGYPLQDHRLPRI" misc_feature 4290427..4290831 /gene="holC" /locus_tag="PA3832" /note="DNA polymerase III, chi subunit [Replication, recombination and repair]; Region: HolC; COG2927" /db_xref="CDD:442171" gene 4290867..4291235 /locus_tag="PA3833" /db_xref="GeneID:879883" CDS 4290867..4291235 /locus_tag="PA3833" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252522.1" /db_xref="GeneID:879883" /translation="MDSHKPTQPPEQLLDDLESIHDLLYERNEPPLLTESFEPDNIPL LSDVVSPGTAPRAPEPQTAAATTAGLAPAEQERLDDELRASAELILQEVIDDFAPQIE AELRRRLQARLGRLLGQRNG" gene 4291356..4294208 /gene="valS" /locus_tag="PA3834" /db_xref="GeneID:879905" CDS 4291356..4294208 /gene="valS" /locus_tag="PA3834" /EC_number="6.1.1.9" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="valine--tRNA ligase" /protein_id="NP_252523.1" /db_xref="GeneID:879905" /translation="MDKTYQPHAIETSWYETWESNDYFAPSGEGQPYTIMIPPPNVTG SLHMGHGFNNAIMDALIRYRRMQGRNTLWQPGTDHAGIATQMVVERQLGAQGVSRHDL GREKFLEKVWEWKEQSGGNITRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRLHED GLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWHLRYPLVNGAKTSEGLDYLVVAT TRPETLLGDAAVAVHPEDERYAKLIGQFAELPIVGRHIPIIADEYVDREFGTGCVKIT PAHDFNDYEVGKRHDLPLINIFDKNAAVLAQAQVFHLDGSVNPNLDPSLPQSYAGMDR FAARKAIVAEFEAMGLLEKVDDHALKVPKGDRSGTVIEPWLTDQWYVSTKPLAEDAIA AVEDGRIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRDEVE VRTKHKLGNEAELRQDEDVLDTWFSSGLWTFSTLGWPQQTEFLKTFHPTDVLVTGFDI IFFWVARMIMLTMHLVKNPDGTPQIPFKTVYVHGLVRDGQGQKMSKSKGNVLDPLDIV DGIDLDTLLQKRTSGMMQPKLAEKIAKQTRAEFPEGIASYGTDALRFTFCSLASTGRD IKFDMGRVEGFRNFCNKIWNAANFVIENTDGQDTGVNGEPVELSSVDRWIISQLQRTE QEVTRQLDAFRFDLAAQALYEFIWDEYCAWYLELVKPVLWDENAPIERQRGTRRTLIR VLETALRLAHPFMPFITEEIWQRIKGQAGKEGPTLMLQPWPVADEGRIDAAAEGDIEW VKALMLGVRQIRGEMNISMAKRIDIILKNASPSDHRRLADNEPLLMKLAKLESIRVLE AGEEAPMSATALVGDMEVLVPMAGLIDKSAELGRLDKEIQRLEGEVKRVGGKLSNEGF VAKAPADVIEKERAKLAEAEQALAKLAEQRQKIAAL" misc_feature 4291356..4294199 /gene="valS" /locus_tag="PA3834" /note="Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: ValS; COG0525" /db_xref="CDD:440291" gene complement(4294255..4294605) /locus_tag="PA3835" /db_xref="GeneID:879906" CDS complement(4294255..4294605) /locus_tag="PA3835" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252524.1" /db_xref="GeneID:879906" /translation="MGKRVVVLLWLLFTSMSAHAIDKKVNNVTIMRVGFMVDANSPGG GWGFIVSKPGAADCGFGLMRLPPMNTDAGKAMLSLMLSAQATQNKLPEIAYSASATVN AVCQITSAQIDSGA" protein_bind 4296988..4297000 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4297250..4298227 /locus_tag="PA3836" /db_xref="GeneID:879811" CDS 4297250..4298227 /locus_tag="PA3836" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252525.1" /db_xref="GeneID:879811" /translation="MMQAYKNKWLPLSALALGMALSFGANAEEQKSVAVTAIVEHPAL DAARDGVKEALQEAGYEDGKNLKWQYQSAQGNTGTAAQIARKFIGDKPDVIVGIATPS AQALVAATKSIPIVFSTVTDPVGAHLTPSWEASGTNVTGVSDMLALDKQIELIKKVVP GAKRIGMVYNPGEANSVVVVKELKELLPKMGLSLVEASAPRSVDVSSAARSLVGKVDA IYTNTDNNVVSAYEALVKVGNDAKIPLIASDTDSVKRGAIAALGINYKEMGKQTGRMV VRILKGEKPGEIKPETSDNLQLFVNPGAAQKQGVTLSDELLKSAAEVIK" misc_feature 4297343..4298221 /locus_tag="PA3836" /note="ABC transporter substrate binding protein; Region: ABC_sub_bind; pfam04392" /db_xref="CDD:427918" misc_feature order(4297448..4297450,4297454..4297456) /locus_tag="PA3836" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:380548" misc_feature order(4297544..4297552,4297604..4297612,4297772..4297774, 4297919..4297921,4297994..4297996) /locus_tag="PA3836" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:380548" gene 4298311..4299201 /locus_tag="PA3837" /db_xref="GeneID:879812" CDS 4298311..4299201 /locus_tag="PA3837" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_252526.1" /db_xref="GeneID:879812" /translation="MSLFSLFGALEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLG GAVCATLIALGWDPYSATLAATAAGALAGLATGLLNVKLKIMDLLASILMMIALYSIN LRIMGKPNVPLIAEPTLFTLLQPEWLSDYVFRPLLLVFIVIAAKLLLDWFFTTQKGLA IRATGSNPRMARAQGVNTGGMILLGMAISNALVALAGALFAQTQGGADISMGIGTIVI GLAAVIVGESILPSRRLILATLAVILGAIVYRFFIALALNSDFIGLQAQDLNLVTAVL VTVALVIPMMKKRLLGKKGA" misc_feature 4298311..4299192 /locus_tag="PA3837" /note="ABC-type uncharacterized transport system, permease component [General function prediction only]; Region: COG4120" /db_xref="CDD:443296" gene 4299204..4299998 /locus_tag="PA3838" /db_xref="GeneID:879859" CDS 4299204..4299998 /locus_tag="PA3838" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_252527.1" /db_xref="GeneID:879859" /translation="MLSAKNLKITFNPGTPIETRALRGLSLDIPAGQFVTVIGSNGAG KSTFLNAVSGDLPIDSGQILIDDEDVTRKPVWARANRVARVFQDPMAGTCEDLTIEEN MALAQRRGAGRGLGRAVQASMRDGFRESLATLGLGLENRLGDRIGLLSGGQRQAVSLL MAALQPSRILLLDEHTAALDPRTADFVLHLTARIVAEKKLTTMMVTHSMRQALDVGER TVMLHQGQVVLDVSGEQRKGLDVPDLLAMFEKVRGEKLADDALLLG" misc_feature 4299204..4299995 /locus_tag="PA3838" /note="ABC-type uncharacterized transport system, ATPase component [General function prediction only]; Region: PhnK; COG1101" /db_xref="CDD:440718" gene 4300117..4301949 /locus_tag="PA3839" /db_xref="GeneID:879860" CDS 4300117..4301949 /locus_tag="PA3839" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sodium:sulfate symporter" /protein_id="NP_252528.1" /db_xref="GeneID:879860" /translation="MNLELLWVVGLLATTVALFIHNRLRLDVIALLVIMAFSVSGTLT LNEALAGFSDPSVILIAALFVIGEGLVRTGVAYQVGDWLIARAGSSEARLLVLLMLAV AGLGSVMSSTGVVAIFIPVVLSIAAKLKIPPGRLMMPLAFAGLISGMMTLVATPPNMV VNSELAREGHAGFGFFAFTPIGLMVLAIGVAYMLLTRNWLNAASPAEVGAPKARRTLR DLIRDYRLAGRERRLQVQLGSPLIGSTLEELQLRTRLGANVVGLERVRKFHSEVVKVG GSTELKAGDVLLLDVFAPPEDMDRRCAELNLVRLPFRASYFIDQSREVGMAEVTLPPD STLLGKSVLELGFRSQYGLNVVGLRRDHEALTDGMLEEKLRLGDTLLVIGAWKAIRQL QGRNRDFLVLSLPAEIDEVAPALSKAPHALLSLAVMVALMVSGVVPNVVAALVGCLLM GLFRCIDMDGAYRAIHWQSLVLIVGMLPFALALQKTDGIDLVVSLLVDALGDAGPRVL LASLFLLTAAIGLFISNTATAVLMAPIAIATAKQIGASPYPFAMVVAVAASAAFMTPI SSPVNTLVLGPGQYRFGDFVRIGVPFTLLVMFVCVLVIPWLFPL" misc_feature 4300297..4301946 /locus_tag="PA3839" /note="Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism]; Region: CitT; COG0471" /db_xref="CDD:440239" misc_feature 4300819..4301016 /locus_tag="PA3839" /note="TrkA-C domain; Region: TrkA_C; pfam02080" /db_xref="CDD:460440" misc_feature <4301038..4301295 /locus_tag="PA3839" /note="K+/H+ antiporter KhtSTU, c-di-AMP-binding regulatory subunit KhtT, contains RCK_C (TrkA_C) domain [Inorganic ion transport and metabolism, Signal transduction mechanisms]; Region: KhtT; COG0490" /db_xref="CDD:440256" gene 4302041..4303051 /locus_tag="PA3840" /db_xref="GeneID:879836" CDS 4302041..4303051 /locus_tag="PA3840" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="SAM-dependent methyltransferase" /protein_id="NP_252529.1" /db_xref="GeneID:879836" /translation="MPRPTSPHPDAERKSASPLHPRNRHLGRYDFPRLIAGSPELERF VILNPYGRQSIDFADPAAVKAFNRALLQQFYDVREWDIPDGYLCPPIPGRADYLHYLA DLLGASHDGLIPRGPGLRALDVGTGANCIYPLLGHHEYGWRFVGADIDPQSLASAAAI LAANPRFAAAIELRRQPDRRQIFQGLIGVDERFDMTLCNPPFHASLDEATRGSRRKWK NLGKLDPTRTLPLLNFGGQGAELYCEGGEAAFLAGMAEESRAFATQVFWFTTLVSKAS NLPNLQERLKTLGASDIRVVDMAQGQKQSRFVAWTYLDKKQRRAWRKERWTAALLEPL GE" misc_feature 4302050..4303018 /locus_tag="PA3840" /note="23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF; Region: PRK11727" /db_xref="CDD:236964" misc_feature order(4302410..4302430,4302482..4302487,4302593..4302595, 4302635..4302637) /locus_tag="PA3840" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(4303141..4304502) /gene="exoS" /locus_tag="PA3841" /db_xref="GeneID:879837" CDS complement(4303141..4304502) /gene="exoS" /locus_tag="PA3841" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="exoenzyme S" /protein_id="NP_252530.1" /db_xref="GeneID:879837" /translation="MHIQSLQQSPSFAVELHQAASGRLGQIEARQVATPSEAQQLAQR QDAPKGEGLLARLGAALVRPFVAIMDWLGKLLGSHARTGPQPSQDAQPAVMSSAVVFK QMVLQQALPMTLKGLDKASELATLTPEGLAREHSRLASGDGALRSLSTALAGIRAGSQ VEESRIQAGRLLERSIGGIALQQWGTTGGAASQLVLDASPELRREITDQLHQVMSEVA LLRQAVESEVSRVSADKALADGLVKRFGADAEKYLGRQPGGIHSDAEVMALGLYTGIH YADLNRALRQGQELDAGQKLIDQGMSAAFEKSGQAEQVVKTFRGTRGGDAFNAVEEGK VGHDDGYLSTSLNPGVARSFGQGTISTVFGRSGIDVSGISNYKNEKEILYNKETDMRV LLSASDEQGVTRRVLEEAALGEQSGHSQGLLDALDLASKPERSGEVQEQDVRLRMRGL DLA" misc_feature complement(4303831..4304190) /gene="exoS" /locus_tag="PA3841" /note="GTPase-activating protein (GAP) domain found in bacterial cytotoxins, ExoS, SptP, and YopE. Part of protein secretion system; stimulates Rac1- dependent cytoskeletal changes that promote bacterial internalization; Region: ToxGAP; cd00219" /db_xref="CDD:119405" misc_feature complement(order(4304053..4304055,4304062..4304064, 4304077..4304085,4304146..4304148)) /gene="exoS" /locus_tag="PA3841" /note="switch II binding region [active]" /db_xref="CDD:119405" misc_feature complement(order(4304065..4304067,4304080..4304082)) /gene="exoS" /locus_tag="PA3841" /note="Rac1 P-loop interaction site [polypeptide binding]; other site" /db_xref="CDD:119405" misc_feature complement(order(4303939..4303947,4304065..4304067)) /gene="exoS" /locus_tag="PA3841" /note="GTP binding residues [chemical binding]; other site" /db_xref="CDD:119405" misc_feature complement(order(4303954..4303956,4304053..4304055, 4304065..4304067)) /gene="exoS" /locus_tag="PA3841" /note="switch I binding region [active]" /db_xref="CDD:119405" misc_feature complement(4303216..4303776) /gene="exoS" /locus_tag="PA3841" /note="ADP-ribosyltransferase exoenzyme; Region: ADPrib_exo_Tox; pfam03496" /db_xref="CDD:427336" misc_feature complement(order(4303333..4303335,4303360..4303362, 4303432..4303434,4303468..4303476,4303546..4303548, 4303648..4303650,4303687..4303689)) /gene="exoS" /locus_tag="PA3841" /note="active site" /db_xref="CDD:238144" misc_feature complement(4303648..4303650) /gene="exoS" /locus_tag="PA3841" /note="conformational flexibility of ligand binding pocket [active]" /db_xref="CDD:238144" misc_feature complement(order(4303360..4303362,4303366..4303368, 4303375..4303377)) /gene="exoS" /locus_tag="PA3841" /note="ADP-ribosylating toxin turn-turn motif [active]" /db_xref="CDD:238144" protein_bind 4303694..4303706 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3841" /bound_moiety="AmrZ" protein_bind 4303705..4303717 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3841" /bound_moiety="AmrZ" gene 4304690..4305040 /locus_tag="PA3842" /db_xref="GeneID:879848" CDS 4304690..4305040 /locus_tag="PA3842" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chaperone" /protein_id="NP_252531.1" /db_xref="GeneID:879848" /translation="MNPLYRAAIHQLFLALDLPTPNDEESVLSLQVGPHLCHLAEHPT DHLLMFTRLEGQGDATANEQNLFSQDPCKPILGRDPESGERLLWNRQPLQLLDRAQIH HQLEQLVAAAEELR" misc_feature 4304702..4305037 /locus_tag="PA3842" /note="Class IA type III secretion system chaperone protein, similar to Yersinia SycE; Region: T3SC_IA_SycE_SpcS-like; cd17029" /db_xref="CDD:409313" misc_feature order(4304726..4304728,4304735..4304737,4304741..4304743, 4304750..4304755,4304768..4304788,4304795..4304797, 4304801..4304803,4304807..4304809,4304813..4304815, 4304837..4304839,4304888..4304890,4304894..4304896, 4304924..4304926,4304939..4304941,4304945..4304947, 4304993..4304995,4305005..4305007) /locus_tag="PA3842" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:409313" misc_feature order(4304813..4304818,4304825..4304827,4304831..4304833, 4304837..4304839,4304876..4304878,4304882..4304896, 4304900..4304902,4304912..4304923,4304927..4304929, 4304951..4304953,4304957..4304959) /locus_tag="PA3842" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:409313" gene complement(4305645..4306256) /locus_tag="PA3844" /db_xref="GeneID:879831" CDS complement(4305645..4306256) /locus_tag="PA3844" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252533.1" /db_xref="GeneID:879831" /translation="MQLIGMLDSPFVRRVAIALRLLDLPYEHRPLSVFRNFQAFSLFN PMVKAPTLVLDDGTVLMDSSLILDYLECLAGRERSLLPQRPQARARALSLIGAALVAC EKSVQIYYELNLRPEERRHGPWLERVEGQLLAAYDWLEAALRQEPLARDGGIELVGVT VAVAWRFSQLVVAERVAASEYPELASYSDYAEGLPVFLETPPV" misc_feature complement(4306023..4306250) /locus_tag="PA3844" /note="Glutathione S-transferase, N-terminal domain; Region: GST_N_3; pfam13417" /db_xref="CDD:433190" misc_feature complement(order(4306053..4306058,4306065..4306067, 4306194..4306199,4306206..4306211,4306215..4306220, 4306224..4306226)) /locus_tag="PA3844" /note="C-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:238319" misc_feature complement(order(4306068..4306073,4306107..4306115, 4306224..4306226)) /locus_tag="PA3844" /note="GSH binding site (G-site) [chemical binding]; other site" /db_xref="CDD:238319" misc_feature complement(order(4306053..4306055,4306062..4306067, 4306071..4306076,4306113..4306115)) /locus_tag="PA3844" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238319" misc_feature complement(4305651..4305986) /locus_tag="PA3844" /note="C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases; Region: GST_C_6; cd03205" /db_xref="CDD:198314" misc_feature complement(order(4305843..4305845,4305852..4305857, 4305864..4305866,4305876..4305878,4305885..4305887, 4305894..4305905,4305909..4305911,4305924..4305929, 4305948..4305950,4305957..4305962,4305966..4305974, 4305978..4305983)) /locus_tag="PA3844" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:198314" misc_feature complement(order(4305651..4305662,4305666..4305671, 4305681..4305683,4305756..4305758,4305768..4305770, 4305777..4305782,4305789..4305791,4305927..4305929, 4305948..4305953,4305960..4305962,4305972..4305974)) /locus_tag="PA3844" /note="N-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:198314" misc_feature complement(order(4305756..4305758,4305765..4305767, 4305933..4305938,4305945..4305950,4305960..4305962)) /locus_tag="PA3844" /note="putative substrate binding pocket (H-site) [chemical binding]; other site" /db_xref="CDD:198314" gene 4306380..4307276 /locus_tag="PA3845" /db_xref="GeneID:879832" CDS 4306380..4307276 /locus_tag="PA3845" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252534.1" /db_xref="GeneID:879832" /translation="MSDLPPLTALRSFEAVARLGSISQAASELHVTHSAISQQIKLLE NLLGLALFVREGRGLRLSENGRFYALQVRASLGEIADATRVVRARPREGELVVTVMPS FGLNWLLPRLPRFRKRHPHCRVRLVASLDVQNLRQGLADLGVRIGKGDWEGVGRERLF DDELLMVAAPDFNGGRLPRTPSEIVACPTLRSTESWALWCQRAGVAEPQHGLLINDSN LLLEAVRLGQGIALERRSLVAGALAEGRLVQLGDIRVPYPYPYWLVWPQREPPSDRHQ AFADWLREEARRYQAEQPPLSE" misc_feature 4306380..4307252 /locus_tag="PA3845" /note="DNA-binding transcriptional activator GcvA; Provisional; Region: PRK11139" /db_xref="CDD:182990" gene complement(4307266..4307808) /locus_tag="PA3846" /db_xref="GeneID:879825" CDS complement(4307266..4307808) /locus_tag="PA3846" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252535.1" /db_xref="GeneID:879825" /translation="MLIRAATSTLLVVDIQERLLPAIDDGPALVEYSQWLLRVARALD VPVLASEQYSKGLGPTVAALRDELEPTQILEKLDFSAAADGALLRAPGGDRRQFVVCG SEAHVCVLQTVLDLLGRGREVFVVEEAIGSRRPSDKALAVERMRQAGAMIVSREMVAF EWMERAGSDRFREISRNFIR" misc_feature complement(4307317..4307784) /locus_tag="PA3846" /note="YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them; Region: YcaC_related; cd01012" /db_xref="CDD:238494" misc_feature complement(order(4307485..4307487,4307581..4307583, 4307767..4307769)) /locus_tag="PA3846" /note="catalytic triad [active]" /db_xref="CDD:238494" misc_feature complement(order(4307620..4307622,4307749..4307751, 4307758..4307760)) /locus_tag="PA3846" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238494" misc_feature complement(4307497..4307502) /locus_tag="PA3846" /note="conserved cis-peptide bond [active]" /db_xref="CDD:238494" gene 4307912..4308382 /locus_tag="PA3847" /db_xref="GeneID:879826" CDS 4307912..4308382 /locus_tag="PA3847" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252536.1" /db_xref="GeneID:879826" /translation="MNISLHFESRLQASPEQLWRWITSVDGILREIRPLLSMSVPPGI RSLEDLEVVPRRPLFRSHMRLFGLLPLGTSQLTLLELTPGHGFIEQSPMTGMRLWRHE RRILPTPGEAGECLLVDQLTVRPLFAAGLVRWFLTRIFRHRHRVLCRQFRTDRR" misc_feature 4307924..4308379 /locus_tag="PA3847" /note="Ligand-binding SRPBCC domain [General function prediction only]; Region: SRPBCC; COG4276" /db_xref="CDD:443417" gene 4308456..4309811 /locus_tag="PA3848" /db_xref="GeneID:879840" CDS 4308456..4309811 /locus_tag="PA3848" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252537.1" /db_xref="GeneID:879840" /translation="MNRIKHLLKDLAILIRANLWLIPVIAALVAAVFYFVAPPPPMSA TMATGAEGGGYAVFAGKLREKLKEQGFELKLVPSAGSRDNLERLLGTGEVDIALVQSG QERQLEAGQARQLQTLGAVYQEPLWLFHRSNVHIDQLSDLLHLRLAIGSDGSGTRAAT EAILQANDIAPGHYPITWEARGGNAVVDDLLAGKLDAAFIVGPAENPAIQKLADNDQL RLVNFRRSAAYEARLPFLKRVEVGEGLLNLPRNVPERNISTLSPVATLVINERFHPAL IPLVLEAAREVMKDGSLLDKPGAFPSAEPRTLRLHEDAERYYKSGLPLLQRYLPFRIA SLADRYIILLIPFIAILIPLMKSIGPLYRWRIRARIYRWYRYIRDIDRKLDSGTDAEQ LRSEIERLEKLESELNTVEVPLSYYHELYELHLHLNFVIKRLHGLQERQATQAEAGNL G" misc_feature 4308588..4309412 /locus_tag="PA3848" /note="TRAP-type uncharacterized transport system, periplasmic component [General function prediction only]; Region: Imp; COG2358" /db_xref="CDD:441925" gene 4309904..4310908 /locus_tag="PA3849" /db_xref="GeneID:879841" CDS 4309904..4310908 /locus_tag="PA3849" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="nucleoid-associated protein NdpA" /protein_id="NP_252538.1" /db_xref="GeneID:879841" /translation="MPIHHAIVHLIEKKPDGTPAVLHARDAELGDSQAIENLLADLNE SYNAKNKAWGFFQGESGAYPFSGWLGEYLEGDRDFVGFSREAVEHLQKLMEESNLSTG GHILFAHYQQGMTDYLAIALLHHSEGVAVNESLEVTPSRHLDLGQLHLAARINISEWR NNKQSKQYISFIKGKGGKKVSDYFRDFIGCQEGVDSPSETRTLLKAFSDFVESEDMAE EQAREKTETLVDYATSQARIGEPMTLDALSELMDDQQPRAFYDYIRNKDYGLSPEIPA DKRTLNQFRRFTGRAEGLSISFEAHLLGSKVEYDEERDMLIIRQLPTQLKDQLKRRKD " misc_feature 4309904..4310905 /locus_tag="PA3849" /note="nucleoid-associated protein NdpA; Validated; Region: PRK00378" /db_xref="CDD:178993" gene complement(4310951..4311862) /locus_tag="PA3850" /db_xref="GeneID:879817" CDS complement(4310951..4311862) /locus_tag="PA3850" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252539.1" /db_xref="GeneID:879817" /translation="MKAYDIEIVNDAAHAGEANHGWCFGLPPGIRPEQWPLDPDTGYP LMHGFTLLLPEDYRVHGPEIVALSFFSLAPDQNDGGPTSVDGIREMLIDPPAQPPAEA ELRPFWEAGRNSHPRLHRMEDILGGAYALILLDAAEFSGAPCQPRALPAGNPLLAQTE PPQWLEAGSAASFVPDWAEDDYYLLRALGGRPAAGHQQRYPLRWTARAQDPNAGVVPS EYGDGGYQLPHYWLDGKIERDNYREHPWVEGHLPNHIGGTMRPVQGVPEMSPFYVEFE EYLGGYNFGGGNAQLDFRDMRFDWACG" gene complement(4311951..4312703) /locus_tag="PA3851" /db_xref="GeneID:879818" CDS complement(4311951..4312703) /locus_tag="PA3851" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252540.1" /db_xref="GeneID:879818" /translation="MPAETPPLRPDADPPQCALPEARPDRDASTKLRAAVLGANDGLV SNLCLVMGVAGASMAHSSIVLTGMAGLVSGACSMALGEWLSVTNAREMASKRIAEEER LLRLCPNTETQELIDIFTAKGLSEVSARRVALQLMNDGRGALDTLSREALGIDPTELG GNPWNAAGTSFLLFSLGALVPVAPFLFLDGAAALVASLLSSLLALLFSGAVTARFTGR PLAFSALRQVLVGTLAAAFTYGLGTALGVGLG" misc_feature complement(4311966..4312664) /locus_tag="PA3851" /note="Nodulin-21 and CCC1-related protein family; Region: Nodulin-21_like_2; cd02433" /db_xref="CDD:153124" gene complement(4312707..4313642) /locus_tag="PA3852" /db_xref="GeneID:879856" CDS complement(4312707..4313642) /locus_tag="PA3852" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252541.1" /db_xref="GeneID:879856" /translation="MSELILHHYPTSPFAEKARLLLGFKQLSWRSVMIPPVMPKPDLV ALTGGYRKTPVLQVGADVYCDTALIARRLEQEKAVPALFPEGQEMVAASFAQWADAVL FQHAVSLAFAPESIAVRFGKLPPEFLKAFMADRSQLFSGGSAGRLPLEQARHQWPAFM ARLERQLSREDGDFLFGEASVADFAVAHCLWFLKGTPVTAPLVDDYPQVQAWLGRVLG FGHGAPAEMSAEEALEVARGSQPAALPDESFSDPNGFLPGQAVAIAATDYGVDAVQGE LLFAGSEELILRREDPRAGTVHVHFPRLGFRIEAR" misc_feature complement(4312992..4313633) /locus_tag="PA3852" /note="Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]; Region: GstA; COG0625" /db_xref="CDD:440390" gene complement(4313763..4314452) /locus_tag="PA3853" /db_xref="GeneID:879857" CDS complement(4313763..4314452) /locus_tag="PA3853" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transferase" /protein_id="NP_252542.1" /db_xref="GeneID:879857" /translation="MGYLKNHWWKRWIRRRGCKLAGGPASVGKRTTLVLEERVELGHL RIVPPRLEIGAYSYVRSGTDLSLVASIGRFCSIGSDCFIGQEKHTHPSDWVSSHPFQH TGTALRYEPALSYAEIGHDVWIGHSAMVMEGVKVGTGAIIATRAVVTRDVPPYAIVAG TPAQVIRYRHPPEIIEGLLASRWWELDSAFLTGLPLDRPREFLAALEAREAPRAAYRR MTITRQGCRLD" misc_feature complement(4313892..4314305) /locus_tag="PA3853" /note="Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and...; Region: LbH_XAT; cd03349" /db_xref="CDD:100040" misc_feature complement(order(4313946..4313948,4313970..4313972, 4314018..4314020,4314075..4314077,4314084..4314086, 4314090..4314092,4314153..4314155,4314159..4314161, 4314165..4314167,4314180..4314185,4314225..4314227, 4314279..4314281,4314285..4314287)) /locus_tag="PA3853" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:100040" misc_feature complement(order(4313955..4313957,4313967..4313969, 4313973..4313978,4313982..4313984,4314006..4314008, 4314021..4314026,4314075..4314077,4314084..4314086, 4314147..4314152,4314177..4314179,4314183..4314188, 4314270..4314272,4314279..4314281)) /locus_tag="PA3853" /note="active site" /db_xref="CDD:100040" misc_feature complement(order(4314147..4314152,4314186..4314188, 4314270..4314272,4314279..4314281)) /locus_tag="PA3853" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100040" misc_feature complement(order(4313955..4313957,4313967..4313969, 4313973..4313978,4313982..4313984,4314006..4314008, 4314021..4314026,4314060..4314062,4314075..4314077, 4314084..4314086,4314114..4314116,4314177..4314179, 4314183..4314185)) /locus_tag="PA3853" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:100040" gene complement(4314481..4314795) /locus_tag="PA3854" /db_xref="GeneID:879807" CDS complement(4314481..4314795) /locus_tag="PA3854" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="GIY-YIG nuclease superfamily protein" /protein_id="NP_252543.1" /db_xref="GeneID:879807" /translation="MSEATAATAAIGKCWSVYLVRAENGALYCGISDDPLRRFDTHCS GKGARFFHSSPARALVYVEACASKGDALRRERAIKALSKRAKERLLVGVPVLREVGEP AI" misc_feature complement(4314514..4314771) /locus_tag="PA3854" /note="GIY-YIG nuclease superfamily protein; Validated; Region: PRK00329" /db_xref="CDD:178979" misc_feature complement(order(4314706..4314714,4314742..4314750)) /locus_tag="PA3854" /note="GIY-YIG motif/motif A; other site" /db_xref="CDD:198403" misc_feature complement(order(4314571..4314573,4314670..4314672, 4314682..4314684,4314706..4314708,4314712..4314714, 4314742..4314744)) /locus_tag="PA3854" /note="putative active site [active]" /db_xref="CDD:198403" misc_feature complement(4314571..4314573) /locus_tag="PA3854" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:198403" gene complement(4314788..4315489) /locus_tag="PA3855" /db_xref="GeneID:879808" CDS complement(4314788..4315489) /locus_tag="PA3855" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252544.1" /db_xref="GeneID:879808" /translation="MITLFQFPAAFNVPNASPYCLKLETWLRLAGLEYQVKVVSDPRK APKGKLPYVRIEGEAIGDSEIVIRTLGERYGVTLDAGLDARGKGWARAITRLCDEHLY YLMLYFRWFDEDSWRVLKPVFFGSLPFGVRDAVAWAMRRKVRATLRAQGLGVHGRDEL LAFARDDLDALDGLLGQVPYYGGEHPCSADAAAYGILANLIEATLDTPLSHVARGYPR LVAYCERMRERVWSE" misc_feature complement(4314803..4315489) /locus_tag="PA3855" /note="Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]; Region: GstA; COG0625" /db_xref="CDD:440390" misc_feature complement(4315265..4315489) /locus_tag="PA3855" /note="GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It...; Region: GST_N_Metaxin_like; cd03080" /db_xref="CDD:239378" misc_feature complement(order(4315286..4315291,4315298..4315300, 4315403..4315408,4315415..4315420,4315424..4315429, 4315433..4315435)) /locus_tag="PA3855" /note="putative C-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:239378" misc_feature complement(order(4315301..4315306,4315337..4315345, 4315433..4315435)) /locus_tag="PA3855" /note="putative GSH binding site [chemical binding]; other site" /db_xref="CDD:239378" misc_feature complement(order(4315286..4315288,4315295..4315300, 4315304..4315309,4315343..4315345)) /locus_tag="PA3855" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:239378" protein_bind 4314822..4314834 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3854" /bound_moiety="AmrZ" gene complement(4315556..4316038) /locus_tag="PA3856" /db_xref="GeneID:879784" CDS complement(4315556..4316038) /locus_tag="PA3856" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252545.1" /db_xref="GeneID:879784" /translation="MAHPNAELIERFYQAFQRLDGEAMAACYAPQATFHDPAFGELRG REVGDMWRLLTSRARDFRLDYANVRADENEGRAQWVAHYLFTQTGRRVENRIEARFRF ADGLIVEHRDQFDLWRWSRQALGAKGLLLGWAPPVQRAIRGQARKGLAAYQAAHPAAG " misc_feature complement(4315673..4316029) /locus_tag="PA3856" /note="Ketosteroid isomerase-related protein [General function prediction only]; Region: YesE; COG3631" /db_xref="CDD:442849" gene complement(4316109..4316825) /gene="pcs" /locus_tag="PA3857" /db_xref="GeneID:879785" CDS complement(4316109..4316825) /gene="pcs" /locus_tag="PA3857" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phosphatidylcholine synthase" /protein_id="NP_252546.1" /db_xref="GeneID:879785" /translation="MPVNLSMTPINKAKAWGVHAVTASGVILALLALLALVDNKPQAC LLWLGLALLVDGLDGTLARKYEVKEMLPHFDGSVLDLVIDYLTYVFIPAIFIYRYIPL PEHFELLAVGVILVSSLFCFCNVNMKSTDNYFVGFPAAWNVVAVYFYVLDLHPWVNLA TVLVLAALTLTRMKFLHPFRVRQFMPLNIAVTFVWLISSGLLIVQQPADLPILLGLWF AASAYFVGICLWRSAREWFG" misc_feature complement(4316124..4316801) /gene="pcs" /locus_tag="PA3857" /note="Phosphatidylserine synthase [Lipid transport and metabolism]; Region: PssA; COG1183" /db_xref="CDD:440796" gene complement(4316937..4317962) /locus_tag="PA3858" /db_xref="GeneID:879800" CDS complement(4316937..4317962) /locus_tag="PA3858" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid-binding protein" /protein_id="NP_252547.1" /db_xref="GeneID:879800" /translation="MTIMKGTWLLLAAVCLGASATAEAGATLDAVKRKGYVQCGVSDG LPGFSYADAKGRFKGLDVDICRALAAALFGDAEKVRFTPLSATERFSALQSGTVDLLS RNTSWTSSRDTALGIHFTGVTYFDGQGFLVNRKLGVSSARELKDATVCIQSGTTNELN VADYFRAHGIRYKAVLDDSYEKSARALEAGQCDVLSSDQSQLYAQRLKLAKPEQYVVL PEVISKEPLGPAVRQGDEAWFNIVRWTLYGLLNAEELGVTSSNVERQARDSRNPDVAR LLGSEGDAGKDLQLPRDWVVQMVRQVGNYGEIFARNVGDGSPLKMPRGLNAQWNLGGL HYAPPIR" misc_feature complement(4317174..4317881) /locus_tag="PA3858" /note="Substrate bindng domain of ABC glutamate/glutamine/aspartate/asparagine transporter; the type 2 periplasmic binding protein fold; Region: PBP2_BztA; cd13692" /db_xref="CDD:270410" misc_feature complement(order(4317282..4317284,4317369..4317374, 4317495..4317500,4317630..4317632,4317651..4317653, 4317696..4317698,4317828..4317830,4317837..4317839)) /locus_tag="PA3858" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:270410" misc_feature complement(order(4317417..4317419,4317426..4317428, 4317798..4317800,4317810..4317812)) /locus_tag="PA3858" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:270410" gene 4318259..4318906 /locus_tag="PA3859" /db_xref="GeneID:879801" CDS 4318259..4318906 /locus_tag="PA3859" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="carboxylesterase" /protein_id="NP_252548.1" /db_xref="GeneID:879801" /translation="MSEPLILDAPNADACIIWLHGLGADRTDFKPVAEALQMVLPSTR FILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNASADQVIALIDEQRAKGI AAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDLALDERHKRIPVLH LHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYPMGHEVSLEEIHDIGAWLRKRL" misc_feature 4318283..4318903 /locus_tag="PA3859" /note="Predicted esterase [General function prediction only]; Region: YpfH; COG0400" /db_xref="CDD:440169" gene complement(4318922..4320820) /locus_tag="PA3860" /db_xref="GeneID:879803" CDS complement(4318922..4320820) /locus_tag="PA3860" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA synthetase" /protein_id="NP_252549.1" /db_xref="GeneID:879803" /translation="MNPSPSIAGLSDIEALERVPLEQRDLPSSTYELLQRSARRHGQR IALSCLLHGSAAEEPLRISYAELFARVTQTANALHRLGLESHQAVSFLLPNLPQTHYV IWGGEAAGIVNAINPLLEPEHIAELIRASNTRVLVTLAPFPGTDLWQKVAGLRAQLPE LYAIVVVDPANLLPAPQREALKAQRGPLPEGVLDFDTLIADCPADRLESGRAIHPDDV ASYFHTGGTTGTPKLAPHSHFNEVAMAEIMGLNADYGVDDVLLCGLPLFHVNGVMVTG LAPFHRGAQVLLAGPQGYRNPTLIQDFWKLVERYRVTSFSGVPTIYAALLQVPSDGRD LSSLRFALCGAAPMPVELIRQFEARTGLKVIEGYGLTEGTCGTSCNPRGGERRPGSIG LRLPYCQVKVAVLDGEGNYLRDAAPNEVGNLCLKGPTVFKGYLQQDRNRDIWIGDGWF NTGDLGRIDEDGYIWLTGRSKDLIIRGGHNIDPQMIEEALHRHPAVALAAAVGKPDAK AGELPVAYIQLKPGASASEEELLEHASRHVPERAAVPKDIWLIESMPVTAVGKTFKPA LRLDAIRRVLEEESRRIAEDIRVEVVADERHGQLAHLHVPALDERRQAALEELLGGYA LNYRLHAV" misc_feature complement(4318931..4320808) /locus_tag="PA3860" /note="AMP-binding domain protein; Validated; Region: PRK07529" /db_xref="CDD:236043" gene 4321434..4322627 /gene="rhl" /locus_tag="PA3861" /db_xref="GeneID:879804" CDS 4321434..4322627 /gene="rhl" /locus_tag="PA3861" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase RhlB" /protein_id="NP_252550.3" /db_xref="GeneID:879804" /translation="MVEPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTL RGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAK DAAALTKYTGLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMV EVMVLDEADRMLDMGFIPQVRQIIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPA IVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLVAQNNWERVMVFANRKDEVRRIEER LTKDGISAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTL PEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALPPIEELLGRKITCEMPPAELLKP VPRKH" misc_feature 4321434..4322624 /gene="rhl" /locus_tag="PA3861" /note="ATP-dependent RNA helicase RhlB; Provisional; Region: PRK01297" /db_xref="CDD:234938" misc_feature order(4321515..4321520,4321524..4321532,4321539..4321541, 4321593..4321616) /gene="rhl" /locus_tag="PA3861" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:350669" protein_bind complement(4322672..4322708) /experiment="Beta-gal reporter assay [PMID: 19850617]" /experiment="EMSA [PMID: 19850617]" /experiment="Site directed mutagenesis [PMID: 19850617]" /note="'Transcription factor binding site for NP_249584.; Evidence of regulation for: PA3864, PA3862, PA3863'" /bound_moiety="ArgR" gene 4322788..4323735 /gene="dauB" /locus_tag="PA3862" /db_xref="GeneID:879805" CDS 4322788..4323735 /gene="dauB" /locus_tag="PA3862" /note="'Product name confidence: class 4:Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences.'" /codon_start=1 /transl_table=11 /product="NAD(P)H-dependent anabolic L-arginine dehydrogenase DauB" /protein_id="NP_252551.1" /db_xref="GeneID:879805" /translation="MSAATPLIVQQAEAEQLLARIDVLQAMRQLFLDLAAGQALQPAQ QLVEFPAGRGDFINYLGVLAQEQVYGVKTSPYIVREQGPLVTAWTLLMSMQTGQPLLL CDAARLTTARTAATTAVAVDALAPAEACRLALIGSGPVAHAHLQYVKGLRDWQGVRVH SPCLDERRLQSLRAIDPRAEAAGSLEEALDEADVILLCTSSARAVIDPRQLKRPALVT SISTNAPRAHEVPAESLAAMDVYCDYRHTTPGSAGEMLIAAEQHGWSPEAIRGDLAEL LSAQAPRPEYRRPAFFRSIGLGLEDVALANALYRLRQAG" misc_feature 4322806..4323732 /gene="dauB" /locus_tag="PA3862" /note="Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family [Amino acid transport and metabolism]; Region: OCDMu; COG2423" /db_xref="CDD:441972" gene 4323758..4324885 /gene="dauA" /locus_tag="PA3863" /db_xref="GeneID:879806" CDS 4323758..4324885 /gene="dauA" /locus_tag="PA3863" /note="'Product name confidence: class 4:Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences.'" /codon_start=1 /transl_table=11 /product="FAD-dependent catabolic D-arginine dehydrogenase DauA" /protein_id="NP_252552.1" /db_xref="GeneID:879806" /translation="MIEADYLVIGAGIAGASTGYWLSAHGRVVVLEREAQPGYHSTGR SAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCEHPLLSPRPEMVVDFSDDPEELRRQ YESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRGIRR NQGQVLCNHEALEIRRVDGAWEVRCDAGSYRAAVLVNAAGAWCDAIAGLAGVRPLGLQ PKRRSAFIFAPPPGIDCHDWPMLVSLDESFYLKPDAGMLLGSPANADPVEAHDVQPEQ LDIATGMYLIEEATTLTIRRPEHTWAGLRSFVADGDLVAGYAANAEGFFWVAAQGGYG IQTSAAMGEASAALIRHQPLPAHLREHGLDEAMLSPRRLSP" misc_feature 4323761..4324873 /gene="dauA" /locus_tag="PA3863" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" gene 4324948..4325580 /gene="dauR" /locus_tag="PA3864" /db_xref="GeneID:879820" CDS 4324948..4325580 /gene="dauR" /locus_tag="PA3864" /note="'Product name confidence: class 4:Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences.'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252553.1" /db_xref="GeneID:879820" /translation="MSPSQDPSLENYRAIADGIATLFFPHAEVVLHDLRSQRVDYIAN NLSKREVGDDSALEDMLEGDSDERNIGPYEKLNWDGQKIRSVSTVLRDSAGQPLAVLC INLNISLFESAKAALDLFLSPSKLIPQPDALFRDDWQERINTFLHGWLRQRQLGLNLL TREHKRELVLALHAEGAFKGKSAANYVANVLNMGRATVYKHLKELKEGGD" misc_feature 4324948..4325568 /gene="dauR" /locus_tag="PA3864" /note="Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains [Transcription]; Region: YheO; COG2964" /db_xref="CDD:442204" gene complement(4325604..4326395) /locus_tag="PA3865" /db_xref="GeneID:879821" CDS complement(4325604..4326395) /locus_tag="PA3865" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid binding protein" /protein_id="NP_252554.1" /db_xref="GeneID:879821" /translation="MIKSLNTKNLLGGLLLGVLASGSAVAADGNLRIGIEAAYPPFSF KTAEGELAGFDYDIGNALCAQMQVKCQWIEQEYDGLIPSLKVRKIDAALSSITITEER RRSVDFTHKYYFTPGRLVMKEGAQLDDSFSQLAGKRIGVQRGATADRFASAVLAKAGA EVVRYTSQDEIYLDLVAGRLDATFADSIPLQTGFLDTPRGKGYAFAGPEFKDPKYFGE GAGIAVRKGDAELVGKLNAAIDAIRADGTYKRIEGKYFKSDIYGD" misc_feature complement(4325628..4326305) /locus_tag="PA3865" /note="Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold; Region: PBP2_HisJ_LAO; cd13703" /db_xref="CDD:270421" misc_feature complement(order(4325838..4325840,4325955..4325963, 4325970..4325972,4326090..4326092,4326105..4326110, 4326114..4326116,4326165..4326167,4326279..4326281, 4326288..4326290)) /locus_tag="PA3865" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:270421" gene 4327395..4327559 /locus_tag="PA3865a" /db_xref="GeneID:17373376" CDS 4327395..4327559 /locus_tag="PA3865a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719770.1" /db_xref="GeneID:17373376" /translation="MPKRSIFLCTLFRSSVIIIDNIRHFYWIDKPFKYGIKSCLEPPY ILMPDESLNF" gene complement(4327697..4329991) /locus_tag="PA3866" /db_xref="GeneID:879794" CDS complement(4327697..4329991) /locus_tag="PA3866" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="pyocin protein" /protein_id="NP_252555.1" /db_xref="GeneID:879794" /translation="MTNNSAPPLVVTRGNDNGYEPGSMVITHVQASGLDIIQYIPGRS SYGTPPFVPPGPSPYVGPGMQEYRRLRDTLDKSNSELKKNLKNKTLKEVDELKSEAGL PVKAVSANDIRDEKSIVDALMDAKAKSLKAIEDRPANLYTASDFPQKSEAMYQNQLLA SRKFYGEFLDRHMSELAKAYSADIYKAQIAILKQTSQELESKARSMEAQAQQVTQQLG ADFNAITTPTATKVQQRVKAVDASLSQVSTQVSGAVASATQAVQVKTAQAQQQANSQI SSSQNLISAAFRNQIALAAQASGEAQVTAFNTQVKQIVNEATAFSTARKQALAQFAAN AAAEVETEVNRLTAQVKASPTKAASQAAQATLRQFTESTYAKVNTYAQQTEAELQAKA KEVSAAVAEAQRAATNDLQKTADVVPGQIIQAANTLAMPATSTPLVSVAGFGSAAVET ARLAASLTNAVNRLVQIAGSGPGAYVATFAVLSLYSDQAGKDSDKVPAGVRNALALEA SALGLPGTADLQSVAKAGGTVDMPVRLTSAAQESPSGKSQIAAMLTNGATVPKGVPVR AATLNAATGRYEVTVPAKSTVPNTPPLILTWTPATPPGSQNPSSTTPVVPQPVPVYEG ATITPVQAEPESYPGVPLDLDDLIVIFPVGSGVKPIYIMFNHNPHDVVIDDKIREQIP IRGWTEVEVRDVIGKGATGSSSDKRRPNKTIDGLGRNDSATVYGSPPNGYIVVNDRTG EIIQIADRNDSAWAVDGRIIWRNK" misc_feature complement(4328003..4328437) /locus_tag="PA3866" /note="S-type Pyocin; Region: Pyocin_S; pfam06958" /db_xref="CDD:399737" misc_feature complement(4327718..4327987) /locus_tag="PA3866" /note="Colicin E5 ribonuclease domain; Region: Colicin_E5; pfam12106" /db_xref="CDD:432335" protein_bind complement(4329418..4329430) /locus_tag="PA3866" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4330321..4330896 /locus_tag="PA3867" /db_xref="GeneID:879795" CDS 4330321..4330896 /locus_tag="PA3867" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="DNA invertase" /protein_id="NP_252556.1" /db_xref="GeneID:879795" /translation="MLIGYVRISTDDQLLDLQRDAMAKAGCERVFEDTASGAKADRIG LAALLANLRRGDTVVVWRLDRLGRSIKDLIYLVEQLEDAGVGLKSLQENIDTTSTGGR LVFHLFAALAEFERNLIRECTHARLSAARARGRLGGRKKRLDPAKRKVALKLYHERQY TVVEICRMMGIGRSTLYNYITEAERNAHQQA" misc_feature 4330324..4330683 /locus_tag="PA3867" /note="Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and...; Region: SR_ResInv; cd03768" /db_xref="CDD:239737" misc_feature order(4330339..4330341,4330345..4330347,4330510..4330515, 4330522..4330524) /locus_tag="PA3867" /note="catalytic residues [active]" /db_xref="CDD:239737" misc_feature 4330345..4330347 /locus_tag="PA3867" /note="catalytic nucleophile [active]" /db_xref="CDD:239737" misc_feature order(4330507..4330509,4330639..4330644,4330648..4330653, 4330663..4330665) /locus_tag="PA3867" /note="Presynaptic Site I dimer interface [polypeptide binding]; other site" /db_xref="CDD:239737" misc_feature order(4330525..4330527,4330540..4330545,4330627..4330629, 4330636..4330641,4330648..4330653,4330660..4330662, 4330669..4330671) /locus_tag="PA3867" /note="Synaptic Antiparallel dimer interface [polypeptide binding]; other site" /db_xref="CDD:239737" misc_feature order(4330594..4330602,4330627..4330632,4330639..4330644, 4330651..4330653,4330663..4330665,4330672..4330674) /locus_tag="PA3867" /note="Synaptic Flat tetramer interface [polypeptide binding]; other site" /db_xref="CDD:239737" misc_feature order(4330594..4330596,4330642..4330644,4330651..4330653, 4330663..4330665,4330672..4330674) /locus_tag="PA3867" /note="Synaptic Site I dimer interface [polypeptide binding]; other site" /db_xref="CDD:239737" misc_feature 4330732..4330860 /locus_tag="PA3867" /note="helix_turn_helix, cAMP Regulatory protein C-terminus; DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family; Region: HTH_CRP; cl46859" /db_xref="CDD:481199" misc_feature order(4330735..4330743,4330840..4330845,4330849..4330857) /locus_tag="PA3867" /note="DNA-binding interface [nucleotide binding]; DNA binding site" /db_xref="CDD:259851" gene 4331452..4332462 /locus_tag="PA3868" /db_xref="GeneID:878682" CDS 4331452..4332462 /locus_tag="PA3868" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252557.1" /db_xref="GeneID:878682" /translation="MLFSVVDDRSGVAYQEYHCVYGEDAETALRFLFNSMAPKADPSF PFQGRPKLIYLDNGPVAKRRVFQSVMRALGIEWQTHIPASKDGTRTTARSKGKVERPF RTVKEAHETLYHFHKPETEAQANEWLLRYLVRTYNQQTHRAEPLSRIEDWITHVPTEG IREMCSWDQFCRFAREPERRKVGPDARITTDGTAYELEPEMAGDYVVLLWGLFDDELH AEFDGERFGPHYPVSGPIPQHRYRAFKRSKADERSARIRSLADQLGLPIAALSGEDVR LEPGSADSTLPIQPFVFEPQESRIAAKLAIAEELAMPLAKLSMDDRAFIDQVLSETLA TD" misc_feature <4331455..4331898 /locus_tag="PA3868" /note="IS481 family transposase; Region: transpos_IS481; NF033577" /db_xref="CDD:468094" gene 4332653..4333036 /locus_tag="PA3869" /db_xref="GeneID:878683" CDS 4332653..4333036 /locus_tag="PA3869" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252558.1" /db_xref="GeneID:878683" /translation="MAIEKHNIKLATFIAALFYDLSTQKQVRIPTQIEKRDRELYELV KKSKRPVALLVDETHDLNGHTLTGLKRLLELAEDDSGRRRLSIVLAGHPKLCNDLRRP TMEEIGYRTDIFELQEKMQSAGLPV" misc_feature <4332671..>4332982 /locus_tag="PA3869" /note="Type II secretory pathway ATPase component GspA/ExeA/MshM [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: ExeA; COG3267" /db_xref="CDD:442498" gene complement(4333357..4334346) /gene="moaA1" /locus_tag="PA3870" /db_xref="GeneID:879786" CDS complement(4333357..4334346) /gene="moaA1" /locus_tag="PA3870" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein A" /protein_id="NP_252559.1" /db_xref="GeneID:879786" /translation="MTDWIDGQGRQIDYLRLSVTDRCDFRCVYCMAEDMRFLPRQQVL TLEEIERVARLFVAGGVRKLRLTGGEPLVRPGIVGLCERLAALPGLRELCMTSNGSQL VRYARPLYDAGLSRLNISLDTLDPLRFRAITRNGELDKVLAGIDAAQAAGFRRIKLNA VVMKGRNADEVPALVDFAIARGLDISFIEEMPLGQVGRERGESFCSSDEVRALIAQRH ALLDSAEQSGGPARYVRLVEHPQTRIGFISPHSHNFCATCNRLRLTVEGRLLLCLGHE HSLDLRALLRRHPLHDGPLLEAIGEALQRKPARHEFSAAGEVQVLRFMNMSGG" misc_feature complement(4333360..4334334) /gene="moaA1" /locus_tag="PA3870" /note="GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA) [Coenzyme transport and metabolism]; Region: MoaA; COG2896" /db_xref="CDD:442141" gene complement(4334403..4335221) /locus_tag="PA3871" /db_xref="GeneID:878883" CDS complement(4334403..4335221) /locus_tag="PA3871" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="PpiC-type peptidyl-prolyl cis-trans isomerase" /protein_id="NP_252560.1" /db_xref="GeneID:878883" /translation="MSCSHYEERVEKVELPQLKVNGMAIGEDLLARELQYHPADSYAL ALEAACRALIVRQLLLQRADALGIEARCEDGETPEEARIRQLLEEEVQVPEADEDACR TWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETARKQAAELLDELRGHPERFVDLA RRFSACPSKESGGDLGWIEPGQTVPEFEKRLLRRAPGLLEHPLESRYGLHVVELLARE GGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACIEGFAFEGADGALVQ" misc_feature complement(4334475..4335110) /locus_tag="PA3871" /note="nitrogen fixation protein NifM; Region: nifM_nitrog; TIGR02933" /db_xref="CDD:131979" misc_feature complement(4334580..4334858) /locus_tag="PA3871" /note="PPIC-type PPIASE domain; Region: Rotamase; pfam00639" /db_xref="CDD:425792" gene complement(4335276..4335959) /gene="narI" /locus_tag="PA3872" /db_xref="GeneID:878884" CDS complement(4335276..4335959) /gene="narI" /locus_tag="PA3872" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="respiratory nitrate reductase subunit gamma" /protein_id="NP_252561.1" /db_xref="GeneID:878884" /translation="MSTNLLFFGIYPYVALLICLVGSWARFDLSQYTWKAGSSQMLSK KGMRVYSNLFHVGVLFILAGHFVGLLTPASVYHHLISTENKQLLAMVSGGFFGVLCFI GLSGLILRRLTDARVRATGNASDLMILLVLYAQLILGLSTIVASTHHMDGSVMVMLAE WAQAIVTLRPLAAAEAIAPVGLVYKLHVGLGLTLFVLFPFTRLVHIVSAPVWYLGRRY QIVRQKRPA" misc_feature complement(4335279..4335944) /gene="narI" /locus_tag="PA3872" /note="Nitrate reductase gamma subunit [Energy production and conversion, Inorganic ion transport and metabolism]; Region: NarI; COG2181" /db_xref="CDD:441784" gene complement(4335962..4336702) /gene="narJ" /locus_tag="PA3873" /db_xref="GeneID:879782" CDS complement(4335962..4336702) /gene="narJ" /locus_tag="PA3873" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="respiratory nitrate reductase subunit delta" /protein_id="NP_252562.1" /db_xref="GeneID:879782" /translation="MNDHSQLFRLLALLLDYPRAELREESLGLHALIRTCELPEALRD GLAALLNELCQGDLLDVQARYDGLFERGRSVSLLLFEHVHGESRDRGQAMVDLLDRYT GAGLQIDVPELPDYLPLYLEYLSLLPFAAASEGLAEVAHILGLLALRLEERGSAYAAI FEALLELGGERPDLGALRRDQAQEQRDDSLEAIDRAWEETPVSFTDPAGGCPSSSGRR PTASTEQPLQWVAQPVPQMQYRAAREGV" misc_feature complement(4336058..4336657) /gene="narJ" /locus_tag="PA3873" /note="chaperone protein TorD; Validated; Region: torD; cl00958" /db_xref="CDD:470012" gene complement(4336708..4338249) /gene="narH" /locus_tag="PA3874" /db_xref="GeneID:879783" CDS complement(4336708..4338249) /gene="narH" /locus_tag="PA3874" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="respiratory nitrate reductase subunit beta" /protein_id="NP_252563.1" /db_xref="GeneID:879783" /translation="MKIRSQVGMVLNLDKCIGCHTCSITCKNVWTSREGMEYAWFNNV ETKPGIGYPKEWENQEKWKGGWVRAADGSIRPRIGGKFRVLANIFANPDLPEIDDYYE PFDFDYQHLHTAPKAEHQPVARPRSLVSGQRMEKIEWGPNWEEILGTEFAKRRKDKNF DQVQADIYGEYENTFMMYLPRLCEHCLNPACVASCPSGAIYKREEDGIVLIDQDKCRG WRMCISGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDA DRIHEVASCENERELYEKQLEIFLDPFDPAVIAQARKDGVADSVIEAAQKSPVYKLAM DWKLALPLHPEYRTLPMVWYVPPLSPIQNAAAEGHIGSDGVIPDVESLRIPVQYLANL LTAGDTAPVLLALKRLLAMRAYKRAEHVEGRQDLEVLAKVGLSVEQVEEMYRYLAIAN YEDRFVIPSAHREEALSDAFAERSGCGFSFGNGCSGGSNSAVNLFGGKPTNRRDVIQV VQIQE" misc_feature complement(4336795..4338249) /gene="narH" /locus_tag="PA3874" /note="Nitrate reductase beta subunit [Energy production and conversion, Inorganic ion transport and metabolism]; Region: NarY; COG1140" /db_xref="CDD:440755" gene complement(4338261..4342046) /gene="narG" /locus_tag="PA3875" /db_xref="GeneID:879780" CDS complement(4338261..4342046) /gene="narG" /locus_tag="PA3875" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="respiratory nitrate reductase subunit alpha" /protein_id="NP_252564.1" /db_xref="GeneID:879780" /translation="MSHLLDRLQFFKKKQGEFADGHGETSNESRAWEGAYRQRWQHDK IVRSTHGVNCTGSCSWKIYVKNGLITWETQQTDYPRTRPDLPNHEPRGCPRGASYSWY IYSANRLKYPKVRKPLLKLWREARAQHGDPVNAWASIVEDAAKAKSYKSQRGLGGFVR SSWDEVTEIIAAANVYTAKTYGPDRVIGFSPIPAMSMVSYAAGARYLSLIGGVCLSFY DWYCDLPPASPQIWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT KTVSITPDYSEVAKLTDLWLNPKQGTDAALGMAFGHVILKEFHLDRPSAYFVDYCRQY TDMPMLVLLEEHAGGAFKPTRYLRAADLADNLGQDNNPEWKTIAYDERSGGLVSPTGA IGYRWGESGKWNIAELDGRSGDQTRLQLSLLDGPEHACEVAFPYFAGQEHPHFKGVAN DEVLLRRVPFREIVAADGKRLRVATVYDLQMANYSIDRGLGGDNVATSYEDADTPYTP AWQERITGVPAARATQVAREFADSADKTRGKAMVIIGAAMNHWYHMDMNYRAVINMLM MCGCIGQSGGGWAHYVGQEKLRPQTGWAPLAFGLDWSRPPRQMNGTSFFYLHSSQWRH EKLSMHEVLSPLADASRFAEHALDYNIQAERLGWLPSAPQLNRNPLRIAAEAEAAGLP VADYVVRELKSGGLRFASESPDDPQNFPRNMFIWRSNLLGSSGKGHEYMLKYLLGAKN GVMNDDLGKAGGPRPTEVDWVDDGAEGKLDLVTTLDFRMSSTCMYSDIVLPTATWYEK DDLNTSDMHPFIHPLSAATDPAWEAKSDWEIYKAIAKKFSAVAEGHLGVEQDLVTVPL LHDTPTELAQPFGGDGHDWKKGECEPVPGRNLPTLHLVERDYPNVYRKFTSLGPLLDK LGNGGKGIGWNTEKEVKLVGDLNHRVVESGVSQGRPRIDSAIDAAEVVLALAPETNGQ VAVKAWEALSKITGREHAHLALPKEDEKIRFRDIQVQPRKIISSPTWSGLEDEHVSYN AGYTNVHELIPWRTITGRQQFYQDHPWMQAFGEGFVSYRPPVNTRTTEKLLNRKPNGN PEITLNWITPHQKWGIHSTYSDNLLMLTLSRGGPIIWLSEHDAAKAGIVDNDWVEVFN ANGAATCRAVVSQRVKDGMVMMYHAQERIVNVPGSETTGTRGGHHNSVTRVVLKPTHM IGGYAQQAWGFNYYGTVGCNRDEFVVVRKMSKVDWLDEPRHGGLGGDALPQPLPQDI" misc_feature complement(4338321..4342043) /gene="narG" /locus_tag="PA3875" /note="Nitrate reductase alpha subunit [Energy production and conversion, Inorganic ion transport and metabolism]; Region: NarG; COG5013" /db_xref="CDD:444037" protein_bind complement(4338593..4338610) /gene="narG" /locus_tag="PA3875" /experiment="EMSA [PMID: 22505688]" /note="Transcription factor binding site for NP_251281." /bound_moiety="VqsR" gene complement(4342122..4343528) /gene="narK2" /locus_tag="PA3876" /db_xref="GeneID:879781" CDS complement(4342122..4343528) /gene="narK2" /locus_tag="PA3876" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nitrite extrusion protein 2" /protein_id="NP_252565.1" /db_xref="GeneID:879781" /translation="MGMIANTQLKAARGPLLLDWRPEDPEFWARNGKRIASRNLWISI PALLLAFAVWMIWSTVTVRLNSAGFAFSNDQLFLLAALPSISGATLRVFYSFMVPIFG GRRWTALSTASMLIPCIWLGFAVQDPSTPYWVFALIALLCGFGGGNFASSMSNISFFY PKSQQGTALGLNAGLGNLGVSVMQFAVPLAVAGGLFGAFGGEPQQLGDGGRLWLQNAG WIWVPFIAVVSVAAWFGMNDIADAKASFRDQAVIFKRKHNWLMCWLYVATFGSFIGFS AGFAMLSKTQFPDVNPLQYAFLGPLVGALSRPLGGWLADKFGGARITLWNYALMIGGV FAVIAFLPGDGGQGNFFGFLGAFILLFFFAGIGNGSTFRMIPVIFRNEWARRVRDGQA DEAGAARNASMESAAVIGFSAAIGAFGGFFIPKAFGTSLHMTGSAEGALYVFIAYYLS CIVATWWWYARKGAESPC" misc_feature complement(4342143..4343483) /gene="narK2" /locus_tag="PA3876" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" misc_feature complement(order(4342269..4342271,4342278..4342283, 4342290..4342295,4342302..4342304,4342413..4342415, 4342425..4342427,4342437..4342442,4342608..4342610, 4342620..4342622,4342698..4342700,4342707..4342715, 4342722..4342727,4342734..4342736,4342989..4342991, 4342998..4343003,4343010..4343012,4343067..4343069, 4343076..4343084,4343088..4343093,4343256..4343258, 4343355..4343357,4343364..4343369,4343376..4343381)) /gene="narK2" /locus_tag="PA3876" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340899" gene complement(4343540..4344835) /gene="narK1" /locus_tag="PA3877" /db_xref="GeneID:878320" CDS complement(4343540..4344835) /gene="narK1" /locus_tag="PA3877" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nitrite extrusion protein 1" /protein_id="NP_252566.1" /db_xref="GeneID:878320" /translation="MASLRQKQYSVLGMSTLSFAVNFAVWTMFSIIGIRIKDELGLSE SQFGLMVALPILTGSLVRLPLGLITDRFGGRIVFFIHMLLVAIPIYGLAFASQYWHYL VLGLFVGLAGGSFAVGIAYTSAWFEKERQGTAMGIFGAGNAGAAITNLVAPMIVVAFG WRMVPQVYSVAMLVTAVLFWLFTWTDPAHLKGAAEASQRPNLAKQLAPLAELRVWRFG LYYFFVFGGFVALALWLPKYYIAEYGLDLKTASFITMLFTLPSGLIRALGGWFSDHYG ARSVNWGVFWVCLVCLFFLSYPQTTMTIHGIQGDLSLGIGLNVWLFTFLVFVVGIAQG FGKASVYRIIHDYYPSNMGTVGGMVGVIGGLGGFCLPILFGYAADHIGVRSSCFMLLF GLTVVCMVWMHYAIKQQRRIDGQAASADVDLPPTLPTHS" misc_feature complement(4343624..4344802) /gene="narK1" /locus_tag="PA3877" /note="Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major Facilitator Superfamily; Region: MFS_NRT2_like; cd17341" /db_xref="CDD:340899" misc_feature complement(order(4343735..4343737,4343744..4343749, 4343756..4343761,4343768..4343770,4343813..4343815, 4343825..4343827,4343837..4343842,4344041..4344043, 4344053..4344055,4344137..4344139,4344146..4344154, 4344161..4344166,4344173..4344175,4344401..4344403, 4344410..4344415,4344422..4344424,4344476..4344478, 4344485..4344493,4344497..4344502,4344650..4344652, 4344746..4344748,4344755..4344760,4344767..4344772)) /gene="narK1" /locus_tag="PA3877" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340899" gene 4345010..4346878 /gene="narX" /locus_tag="PA3878" /db_xref="GeneID:878321" CDS 4345010..4346878 /gene="narX" /locus_tag="PA3878" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="two-component sensor NarX" /protein_id="NP_252567.1" /db_xref="GeneID:878321" /translation="MNKATAPDADQRDRFFGGSDRAGKPILRRSLVVRFGCYLTLLVS LALIGMFSALLFADYTHQDAAVINHAGSLRMLTYRVALEPSLEGRQALLGTLGERLDS GDIRRLLQRQDADDPIRQLHQELREGLARLDPRALPGRAVLDAYVGDIDRFVGILQAK AERRSQLLSTVQGLCLFLSLLVVFVTLYDLSYHVIGPLRELTSTARRLGRGELDARVT YSGEDELAQLGERFNQMAGELKSIYGDLEERVEDKTRALSQSHQRLELLYASARRLGE NPYDSRTLQPLLNQLEKVLDAGRVTLCLNKDGVERAYSSLTTTERPADFCLQGDCGSC REQASACDQPSSLAQPLLMQPLSIAGHRFGELFIESRSGRLENWQQQLIETFCDNIAR TFALSLQQEQESRLALFAERGTIARELHDSLAQSLSYLKIQVSRLGTLLKREAPAEKI EDTLDELREGLNGAYRQLRELLTTFRLSLDEPSLEAALGNAVAEFGERGEVTIELDNR LQHVPLSPNEEIHVLQIVREALSNVVRHSQAQRAWVRLSSQADGQVSIAVEDDGVGFD PQQNRSGHYGLTIMQERGQTLGSQLRFEARAPHGTRVLFSFVPTALQPSAAKEPTP" misc_feature 4345130..4346839 /gene="narX" /locus_tag="PA3878" /note="nitrate/nitrite two-component system sensor histidine kinase NarQ; Region: PRK10935" /db_xref="CDD:236800" gene 4346875..4347534 /gene="narL" /locus_tag="PA3879" /db_xref="GeneID:878838" CDS 4346875..4347534 /gene="narL" /locus_tag="PA3879" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcriptional regulator NarL" /protein_id="NP_252568.1" /db_xref="GeneID:878838" /translation="MTDMPATADEPVRLLLVDDHPMMRKGVAQLLELEDDLSVVGEAG SGEEALRLAAELDPDMILLDLNMKGMNGLDTLRALREAGVDARIVVFTVSDDKGDVVN VLRAGADGYLLKDMEPERLLEHIRQAATGQMTLSPQLTQILAQALRGDDRSKSLDELT ERERQILRQIAHGYSNKMIARKLDITEGTVKVHVKRVLHKLGMRSRVEAAVWAVENDL V" misc_feature 4346890..4347525 /gene="narL" /locus_tag="PA3879" /note="transcriptional regulator NarL; Provisional; Region: PRK10651" /db_xref="CDD:182619" gene 4347619..4348014 /locus_tag="PA3880" /db_xref="GeneID:878665" CDS 4347619..4348014 /locus_tag="PA3880" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252569.1" /db_xref="GeneID:878665" /translation="MMFERSPDDPLPLVYACSGCSNVAQLANDLALRLDRARLAEMSC IAGVGGDVPLLVRRARSGRPILALDGCPLHCVKGCLARHEVVPTLHLTLSEHGLKKRY GEDCEAQDAERLFVELERLLTPGGKRRCE" misc_feature 4347634..4347984 /locus_tag="PA3880" /note="Uncharacterized conserved protein, contains metal-binding DGC domain [Function unknown]; Region: COG4273" /db_xref="CDD:443414" gene 4348186..4348650 /locus_tag="PA3881" /db_xref="GeneID:878666" CDS 4348186..4348650 /locus_tag="PA3881" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252570.1" /db_xref="GeneID:878666" /translation="MLIGALLVLTWVILLVRYPAKALPVSLAALAGLGLVAAWVIWQD NDESRHLQRQELRLSYAPERCPVDRPLAVELKNGSDRPLLELRWRIAAYRPGDSVNLA DTSFDSPRYRAPNALLGGDSWHDCLPLPPLRPGYRASTLEFRAERLDGRFGN" gene 4348666..4349415 /locus_tag="PA3882" /db_xref="GeneID:878762" CDS 4348666..4349415 /locus_tag="PA3882" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252571.1" /db_xref="GeneID:878762" /translation="METRRLFDQGSAAYASARPRYPDALYRHLAGLCGQRRRAWDCAT GTGQAALGLAQYFGEVLASDTSTQQIEHAVVHPGIRYSVQDAEATDYPDAAFDLVCVA QAWHWFDHSRFNRELLRVLRPGGVFAAWGYGWFSIDAQIDAAIDEEYLRPIGPYWAQQ NRLLWNAYRDVELPLGELPAPAFVIEQQWSLARLFDYMATWSASRLCREAQGNAFVRQ ALQRVAALWGEPTSTRRVRMPLALRIARKDA" misc_feature 4348786..4349049 /locus_tag="PA3882" /note="Methyltransferase domain; Region: Methyltransf_11; pfam08241" /db_xref="CDD:462406" gene 4349502..4350332 /locus_tag="PA3883" /db_xref="GeneID:878763" CDS 4349502..4350332 /locus_tag="PA3883" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_252572.1" /db_xref="GeneID:878763" /translation="MSQPVAFVTGCSSGIGRALADAFQRAGYRVWASARKEDDVRALA EAGFQAVQLDVNDAAALARLAEELGVEAAGLDVLVNNAGYGAMGPLLDGGVEAMRRQF ETNVFAVVGVTRALFPLLRRKSGLVVNVGSVSGVLVTPFAGAYCASKAAVHALSDALR LELAPFGVEVLEVQPGAIASNFGASASREMDSVVDERSPWWPLRRQIQARAAASQDNP TSAEDFARQLLAAVQRRPRPPLVRIGNGSRALPALARWLPRGLLERLLKKRFGLDTRL " misc_feature 4349508..4350329 /locus_tag="PA3883" /note="SDR family oxidoreductase; Region: PRK05693" /db_xref="CDD:168186" gene 4350353..4350739 /locus_tag="PA3884" /db_xref="GeneID:878775" CDS 4350353..4350739 /locus_tag="PA3884" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252573.1" /db_xref="GeneID:878775" /translation="MGDRLAVPIRYYALAGIAAAILLNVLLRGVVRFGGLPASLLIAA LVAGGLAWWFARAQRRWPTWGERLRLVALYGGVLGVLYLLLVGLASLKGDPSPAALLI VVLHYLCYPALLLVFFSGRVYGFFLR" gene 4350834..4351490 /gene="tpbA" /locus_tag="PA3885" /db_xref="GeneID:878776" CDS 4350834..4351490 /gene="tpbA" /locus_tag="PA3885" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein tyrosine phosphatase TpbA" /protein_id="NP_252574.1" /db_xref="GeneID:878776" /translation="MHRSPLAWLRLLLAAVLGAFLLGGPLHAAETAATRSPAWAQAVD PSINLYRMSPTLYRSALPNAQSVALLQRLQVKTVVSFIKDDDRAWLGQAPVRVLSLPT HADRVDDAEVLSVLRQLQAAEREGPVLMHCKHGNNRTGLFAAMYRIVVQGWDKQAALE EMQHGGFGDEDDMRDASAYVRGADVDGLRLAMANGECSPSRFAVCHVREWMAQALDRP " misc_feature 4350963..4351364 /gene="tpbA" /locus_tag="PA3885" /note="bacterial protein tyrosine and dual-specificity phosphatases related to Pseudomonas aeruginosa TpbA; Region: TpbA-like; cd14529" /db_xref="CDD:350378" gene 4351595..4352494 /locus_tag="PA3886" /db_xref="GeneID:878772" CDS 4351595..4352494 /locus_tag="PA3886" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252575.1" /db_xref="GeneID:878772" /translation="MSDAPTSPRFSAATSTRLLDHAQLEALCADYDGFLLDLWGVVMD GTEAFPGALAWLARRHAEGRPVWFLSNSSSSVAEMSAGLERLGIRRDWFAGITTSGQL TIDALLQTAEYRRGGIYLAGVGLAQQSWPAEIRERFVEDIAQAALIVGVGSFPQDELE QRFAPLRGATDLPFLCANPDRVVVSGGRTVYGAGMLAELFSEEGGQVSWYGKPDPAAF RIAQRQLEARGARHILFVGDSLVTDVPGALAARIDTLWLGATGIHREALGAEFNGALD EERVRSLLHGYPIRPHFAAPGLV" misc_feature 4351664..4352371 /locus_tag="PA3886" /note="HAD-superfamily class IIA hydrolase, TIGR01459; Region: HAD-SF-IIA-hyp4" /db_xref="CDD:130526" gene 4352524..4352769 /locus_tag="PA3886a" /db_xref="GeneID:17373377" CDS 4352524..4352769 /locus_tag="PA3886a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719771.1" /db_xref="GeneID:17373377" /translation="MHWLDYLQWPAMLVTVVAAWLVASAHRRRRKVGFWVFLASNLLW IAWGLYAQAYALILLQVCLAAMNLRGTHRNEAPQDSA" gene complement(4352828..4354102) /gene="nhaP" /locus_tag="PA3887" /db_xref="GeneID:878773" CDS complement(4352828..4354102) /gene="nhaP" /locus_tag="PA3887" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="Na+/H+ antiporter NhaP" /protein_id="NP_252576.1" /db_xref="GeneID:878773" /translation="MLDLVAAFIALTTLLTYVNYRFIRLPPTIGVMATALVFSLIVQG LSELGYPILEVEMQEIIRRIDFSEVLMTWFLPALLFAGALHVDLSDLRSYKWPIGLLA TAGVLIATFVIGGLAYYTFPLFGWQVDFIYCLLFGALISPTDPIAVLGILKSAGAPKP LATTIVGESLFNDGTAVVVFAIILGILQLGEAPTVSATAILFVQEAIGGVVFGAVLGY GVFVMMRGIDQYQVEVMLTLALVIGGAALAARLHVSAPIAMVVAGLIIGNHGRHYAMS DETRRYVDKFWELIDEILNALLFALIGLELLLLPFSWLHVAAAFALGGAVLVSRLLTV GPAILVLRRFRGANRQVPAGTIRILVWGGLRGGVSVALALSLPLGPERDLILSLTYIV VLVSILLQGLSIGPLVRRIYAGQPLEKSEGAH" misc_feature complement(<4352870..4354099) /gene="nhaP" /locus_tag="PA3887" /note="NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism]; Region: NhaP; COG0025" /db_xref="CDD:439796" gene 4354544..4355266 /locus_tag="PA3888" /db_xref="GeneID:878804" CDS 4354544..4355266 /locus_tag="PA3888" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_252577.1" /db_xref="GeneID:878804" /translation="MVKTCGKALLGLCAAAAVLALLIHWITPATILHYREDLLFYLQA HLVLVFSSMAAALLVGVPAGILLSRPGMQAQAERLMQVFNVGNTIPPLAVLAIALAII GIGNGPAILALFLASLLPIVRNTYEGLRNVSPALKEAATGIGMTPNQVLLRVELPNAV PIIVGGVRVALALNVGSAPLAFLIGANSLGSLIFPGIYLNNHQQLLLGAACTALLALL LDALVVLFSRMFLERGLTAKEA" misc_feature 4354634..4355155 /locus_tag="PA3888" /note="ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism]; Region: OpuBB; COG1174" /db_xref="CDD:440787" gene 4355266..4356201 /locus_tag="PA3889" /db_xref="GeneID:878805" CDS 4355266..4356201 /locus_tag="PA3889" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_252578.1" /db_xref="GeneID:878805" /translation="MNRLIRSLCLACAGLFAAGLAQAETLRIGGKTFTEQRILTAITA QFLQKRGYDVTVTTGLGSTLARAAQESGQLDIVWEYTGSSLIVYNHIDEKLDAAASYR RVKQLDEAQGLVWLKPTRFNNTYALAMPEEQAEHLGIQSVSDLARVLAEQQEAEPGST HLFAMDPEFAGRPDGLGPMSELYGLHFTRNDIRQMDAGLVYTALKNRQVFLGLVYTTD GRLKDFKLRVLKDDKQYFPFYNAAPVVRKEVMQRHPEFATLFDPIIERLDDATMQALN ARVDIEQQTPQKVAADFLREHHLLDDGQAGQGGSQ" misc_feature 4355338..4356150 /locus_tag="PA3889" /note="Substrate-binding domain YehZ of an osmoregulated ABC-type transporter; the type 2 periplasmic-binding protein fold; Region: PBP2_YehZ; cd13611" /db_xref="CDD:270329" misc_feature order(4355356..4355358,4355362..4355364,4355500..4355505, 4355512..4355514,4355632..4355634,4355638..4355640, 4355908..4355910,4355980..4355982) /locus_tag="PA3889" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270329" gene 4356201..4356863 /locus_tag="PA3890" /db_xref="GeneID:878812" CDS 4356201..4356863 /locus_tag="PA3890" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_252579.1" /db_xref="GeneID:878812" /translation="MDFFSVLSHLDWSQVGQLTLQHLLLVLVAVGLAILVGVPLGVLM TRFTWLAGPLQGAATVMLTIPSIALFGLLMPVYSVFGQGLGPLPAITAVFLYSLLPIL RNTYLALTGVEAGIREAGKGIGMTFWQRLRMVDIPLAVPVILAGVRTAVVMNIGVMTI AAVIGAGGLGVLILTSISQSNMPMLVVGAVLVSLLAIVADLLLQWLQRILTPKGLRAS AH" misc_feature 4356300..4356848 /locus_tag="PA3890" /note="ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism]; Region: OpuBB; COG1174" /db_xref="CDD:440787" gene 4356876..4358039 /locus_tag="PA3891" /db_xref="GeneID:878813" CDS 4356876..4358039 /locus_tag="PA3891" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_252580.1" /db_xref="GeneID:878813" /translation="MIELDKLSKTFTQKNGKEFRAVDSVSLTVEKGEICVFLGPSGCG KTTTLKMINRIIPPTSGRVLIDGQDTADLDEVTLRRHIGYVIQQIGLFPNMTIEENIM VVPRLLGWDKARCKEKARELMSMVKLEPKQYLQRYPRELSGGQQQRVGVIRALAADAP LLLMDEPFGAVDPINRESIQNEFFEMQRKLGMTVIMVSHDIDEAIKLGDKVAVFKSGR LLQYDHPDTLLAHPADEFVSAFTGQDSTLKRLLLVRAEDAADSSLVTARPQTPVAEAL ELMDENDRRYLIVVDDQGKGLGYVRRKDLRRQEGTCAPFVTPFRVTASHDEHLRILLS RMYEFNSSWLPVLDPDQQFLGEVTQESIADYLSSGRSRGGKGLIVSPAEQVGA" misc_feature 4356876..4357805 /locus_tag="PA3891" /note="ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]; Region: OpuBA; COG1125" /db_xref="CDD:440742" misc_feature 4357644..4357976 /locus_tag="PA3891" /note="Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found associated with the ABC transporter OpuCA; Region: CBS_pair_ABC_OpuCA_assoc; cd04582" /db_xref="CDD:341359" misc_feature order(4357650..4357652,4357656..4357664,4357731..4357739, 4357902..4357904,4357941..4357943,4357947..4357949, 4357953..4357958,4357965..4357967) /locus_tag="PA3891" /note="putative ligand binding site II [chemical binding]; other site" /db_xref="CDD:341359" misc_feature 4357650..4357823 /locus_tag="PA3891" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341359" misc_feature order(4357731..4357733,4357770..4357772,4357782..4357787, 4357794..4357796,4357836..4357838,4357902..4357910, 4357953..4357955) /locus_tag="PA3891" /note="putative ligand binding site I [chemical binding]; other site" /db_xref="CDD:341359" misc_feature 4357836..4357967 /locus_tag="PA3891" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341359" gene complement(4358167..4359075) /locus_tag="PA3892" /db_xref="GeneID:878746" CDS complement(4358167..4359075) /locus_tag="PA3892" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252581.1" /db_xref="GeneID:878746" /translation="MTLKSVISLLATLLILLVAVFIGRTLWVNYMDTPWTRDGRVRAD VINVAADVSGIVVDVPVRDNQLVKKGDLLMQIDPDHYRIAVKQAESLVASRKATLEMR QLNARRRAEMDEMVVSRESRDDAHNTAAAAMADYEQAKAQLDAARLNLERTRVVAQVD GYVTNLNVHRGDYARVGEAKMAVIDKNSYWVYGYFEETKLPYIREGDPVDMQLMSGEH LKGHVESIARGIYDRDNPESRELTADVNPTFNWVRLAQRVPVRVHIDEVPDGVLLSAG ITCTVIVKPQGRDDQASAAQAPGRAG" misc_feature complement(4358203..4359024) /locus_tag="PA3892" /note="p-hydroxybenzoic acid efflux pump subunit AaeA; Region: PRK10559" /db_xref="CDD:182548" gene complement(4359302..4361497) /locus_tag="PA3893" /db_xref="GeneID:878747" CDS complement(4359302..4361497) /locus_tag="PA3893" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252582.1" /db_xref="GeneID:878747" /translation="MSGRSAGFALPSRDEWRRALAEWARSDGATWIYVFKVLCAAFLT LWLAMRLELPQPSTATITVFIVMQPQSGQVFAKSFYRILGTLVGLSVMVTLIALFAQE RVLFLLSSAIWIGLCTAGAARYRDFRSYACVLAGYTATLIGIPATSHPEGAFMQAIWR VLEISLAILCSGVVSAVIMPQTTSAAMRNALYVRFGLFAAFVLDSLRGVGGRERFESS NVAFAAQAVGLETMRAASAFEDPHMRLRNGRLIRLSSEFMAMNTRFHALHQLLERLRA QGSTQVLEAFEPCLEEITGLLEEIRGRAVTDHDAERFAQRLADCRERLMARIRQARGE LLAREPGEEARLDFNTAAELLYRFAEEMHDYALTHASLAAHRHEREQWKDAFTAKANA VAAAVAGMRTGLMILLFGCFWIYSTWPSGGTFALNAVAVSALASAAPNPKKVAMQMAI GTMAAALLGFSEMFFVYPHIDGFPLLCLVLAPVFALGAFISSRPQWAGYGLGLLVFFC FGSVPANLTVYDPAHVINEYIALILSMLLSAAAAAVILPPNSAWLWKRLERDLRMRVV FAISGRSRGLGSAFESGTRDLLNQAYGVAAGRPDVQRGLLRWMFLVLEVGHAIIELRR EQERLPDEPCYAEAMPWRQAIRAMGRALIRLFVRPGAENLERALAAVDQAIHAARHTD EPCAPHFDSSPLRRVRSYLHFIRSSLLAPTSPLTELAGRTSGQGTVHAS" misc_feature complement(4359353..4361407) /locus_tag="PA3893" /note="Fusaric acid resistance protein family; Region: FUSC; pfam04632" /db_xref="CDD:428044" gene complement(4361494..4362984) /locus_tag="PA3894" /db_xref="GeneID:878791" CDS complement(4361494..4362984) /locus_tag="PA3894" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252583.1" /db_xref="GeneID:878791" /translation="MVGSFVGFLVVFSAISGCVSTGDIAPEAATLDANALATDHAIQA AAREAGWPQAQWWKVYADPQLDAWIEKALDGNPGLAVAHARVRQAKSMAGLVESIESP QIEGKGSLVRHRWPDDYFYGPGDLARTTSWNNSTEIGLNYKLDLWGRDRSDSERAVDL AHMAAAEARQAQLELEGNIVRAYVQLSLQYAEMDIAKAMLQQQRDILALAQRRLRGGI GTHFEVSQAEVPLPETERRIEVIDEEIQLTRNLLAALAGKGPGEGRTIRRPSLNLAAQ PSLPSALPAELLGRRPDVVARRWQVAALAKGVDVARADFYPNVDLMASVGFSAVGGGM LEFFRSAKYTYSAGPAVTLPIFDGGRLRSQLGEAAAGYDAAVEQYNQTLVDALKNISD QLIRLHSVDIQKDFAAQSVASAQKTYDIATLAYQRGLTDYLNVLNAQTRLFQQQLVQE QVQAARLAAHASLLTALGGGVGAGADTPAQRKLAPENVPVRAVSSR" misc_feature complement(4361593..4362945) /locus_tag="PA3894" /note="efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; Region: outer_NodT; TIGR01845" /db_xref="CDD:273830" gene 4363230..4364183 /locus_tag="PA3895" /db_xref="GeneID:878792" CDS 4363230..4364183 /locus_tag="PA3895" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252584.1" /db_xref="GeneID:878792" /translation="MDTLQNMRAFVCVAETGSFTAASQQLNTTTAYVSRAVANLETHL RTRLLNRTTRRIALTEAGQRYLLRCEQILAYVEEAEAEASDAHARPAGKLKLHSMTGI GQHYVIRAIAGYRQQYRDVTFDLTMANRVPDLLDEGFDVAIVVASELPDSGFISQRIG ETYSILCASPEYLRLNGTPSEPSELASHDCLRLVSPVVPLDRWLFDGPNGQEMVSIGA SPFQVNVGDAMTEAIRSGLGIGILPVYSAIEDLGKGTLVRVLPQHRLQQLNVYALYPS RQYLDAKIKTWVEYLKESLPGLLQRDEAALVELGLELGRPS" misc_feature 4363239..4363418 /locus_tag="PA3895" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 4363503..4364102 /locus_tag="PA3895" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(4363533..4363535,4363545..4363547,4363662..4363664, 4363707..4363709,4363713..4363715,4363905..4363907, 4363956..4363958,4364037..4364039) /locus_tag="PA3895" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature order(4363536..4363541,4363551..4363556,4363560..4363565, 4363572..4363574,4363584..4363586,4363590..4363610, 4363794..4363796,4363887..4363901,4363920..4363925, 4363932..4363934) /locus_tag="PA3895" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene 4364278..4365255 /locus_tag="PA3896" /db_xref="GeneID:879660" CDS 4364278..4365255 /locus_tag="PA3896" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="2-hydroxyacid dehydrogenase" /protein_id="NP_252585.1" /db_xref="GeneID:879660" /translation="MKKNVFVFSRLAPEHLERLQCQFNVRVLEPKQGDIDAQYAAALP DTHGMIGVGRPLGARQLEQAKQLEVISSVSVGYDNYDLDYLNRRGIALTNTPDVLTET TADLGFALLISAARRVAELDAWVKAGNWKRTVDAPQFGTDVHGKKLGILGLGRIGAAI ARRGRFGFGMQVLYHGNNRKPELEQELGARFLGFDELLGEADFVCVVVPLGAQTRQLI GARELGLMKPSAILVNVARGQVVDEAALVAALREKRILGAGLDVYEKEPLAESPLFAL DNVVTLPHIGSATHETRRAMAERALQNFEAALRGERPLDLVNPQVWRRG" misc_feature 4364284..4365207 /locus_tag="PA3896" /note="D-glycerate dehydrogenase/hydroxypyruvate reductase (GDH); Region: GDH; cd05301" /db_xref="CDD:240626" misc_feature order(4364302..4364307,4364311..4364313,4364431..4364436, 4364494..4364496,4364578..4364583,4364590..4364595, 4364599..4364604,4364611..4364613,4364623..4364625, 4364629..4364631,4364653..4364655,4364659..4364661, 4364665..4364667,4364671..4364673,4364680..4364694, 4364695..4364709,4364761..4364766,4364776..4364781, 4365073..4365078,4365097..4365099,4365115..4365135, 4365139..4365150,4365154..4365156) /locus_tag="PA3896" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:240626" misc_feature order(4364431..4364433,4364497..4364505,4364572..4364574, 4364986..4364988,4365127..4365129,4365136..4365138) /locus_tag="PA3896" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:240626" misc_feature order(4364500..4364505,4364584..4364586,4364731..4364745, 4364800..4364808,4364815..4364817,4364896..4364904, 4364914..4364919,4364980..4364988,4365058..4365063, 4365127..4365129,4365133..4365138) /locus_tag="PA3896" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:240626" gene complement(4365273..4366175) /locus_tag="PA3897" /db_xref="GeneID:879661" CDS complement(4365273..4366175) /locus_tag="PA3897" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252586.1" /db_xref="GeneID:879661" /translation="MNLSLYLLTVLIWGTTWIAIKLQMGPVAITLSIAYRFALAALVL FAVLLLGRRLQRLDARGQRLCMAQGVCLFCLNFICFYTASQWIPSGLVAVVFSTATLW NALNARLWFGQRIASNVMAGGGLGLLGLGLLFWPELVGHQATPETFYGLGLALLGTLC FSTGNMLSSLQQKAGIRPLTGNAWSMLYGTLILLALCLFQGVPLSFDWSARYVGSLLY LAIPGSVIGFTAYLTLVGRMGPDRAAYCTVLFPVVALNISAFAEGYRWTAPALAGLVL VMLGNVLVFRKPKAPALAGPARST" misc_feature complement(4365300..4366175) /locus_tag="PA3897" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene 4366301..4367182 /locus_tag="PA3898" /db_xref="GeneID:878895" CDS 4366301..4367182 /locus_tag="PA3898" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252587.1" /db_xref="GeneID:878895" /translation="MHQPSDFQVFRTLDRTSNARLLRSSTLSDGLALAHWYRDEAEIL GYSDPGHHTLSLYLQGGWQTFRRDRPGLYGGPDRFCVMPAEHHSDWAVTRGLGFMHLY ISPERLAGAAVRTLDCEPRSLQLEERTYIQDEPLAALCRTLERQDWNEPGEHLLCTSL AHQAVDHLLLTGCGRRTDVRWQGGLAAHVRRRLADYIESHLEQPLELGSLAELAALSE YHFARMFRVSFGLPPHRYVLERRLARARDLLAYSAQPLQEVSLACGFASPSHFNRRFR EAHGATPGQYRAALKAS" misc_feature 4366418..4367179 /locus_tag="PA3898" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" misc_feature <4366871..4367179 /locus_tag="PA3898" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene 4367283..4367792 /locus_tag="PA3899" /db_xref="GeneID:878896" CDS 4367283..4367792 /locus_tag="PA3899" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /protein_id="NP_252588.1" /db_xref="GeneID:878896" /translation="MSSADLAHAAALHTLYSDHHHWLTGWLRRRLGCPQNAADLAQDT FVKVLVSRQAARIDEPRAFLTTIARRVLCNHYRRQDVERAYLEALASLPEREVPSEET RAIVLETLVELDRLLDGLPPLAKETFLLAQLDGLGYAEIATQLGISLSSVKRYMLKAA QRCYFAELP" misc_feature 4367322..4367783 /locus_tag="PA3899" /note="RNA polymerase sigma factor; Provisional; Region: PRK12528" /db_xref="CDD:171561" gene 4367789..4368742 /locus_tag="PA3900" /db_xref="GeneID:878917" CDS 4367789..4368742 /locus_tag="PA3900" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transmembrane sensor" /protein_id="NP_252589.1" /db_xref="GeneID:878917" /translation="MSLPAAPKVPPQVAEQAVRWLVELQGGADDERLRQAWQRWRQAA PEHEQAWRHIEAVNQRLAGIGTPLALAAINAPHSPQRRRALKTLLLVLAAGGSAWGLR ESGSLQRWSADYATGVGERRRLALADGSRLELNSDTAVDVRFDAGERRLLLLRGEIQL STGHDPRPLHVYSAEGRLRPVGTRFDVRQFAGRTRVAVHEGAVQVENRAGQGLLLPSG RQLDFDRERLGAPQPLPVGSGAWTDGMLVAAGMRLDEFLAEVARYRPGRLGCDPRIGG LRISGSYPLDDSERILATLPAVLPVEVRRVTRYWVGVHPRE" misc_feature 4367822..4368739 /locus_tag="PA3900" /note="fec operon regulator FecR; Reviewed; Region: PRK09774" /db_xref="CDD:236622" gene 4368837..4371191 /gene="fecA" /locus_tag="PA3901" /db_xref="GeneID:878918" CDS 4368837..4371191 /gene="fecA" /locus_tag="PA3901" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="Fe(III) dicitrate transporter FecA" /protein_id="NP_252590.1" /db_xref="GeneID:878918" /translation="MSPSRALSPLSRALLLACLGGPVLVSAGSACAAEIRTDARQYYR LPAEPLEQALNHLGRQAGVLIAFSPEQTAARRSQALDGEYTLEEALAALLVGSGLEAR ARGDGAYTLEALPVEDPANLQALTVVGDWLADASAADVFEHPGARDVVRREQFQAQGA ASTREVLERIPGVSAPLNNGTGSHDLALNFGIRGLNPRLASRSTVLMDGIPVPFAPYG QPQLSLAPVSIGNMDAVDVVRGGGAVRYGPQNVGGIVNFVTRAIPEDFATKLDVHSEL SPSSSQDGLKTTHNVLIGGTGANGLGGALLYSGTRGGDWREHSDTRIDDLILKGRFQP SDEHTFSAMTQYYDGEADMPGGLGTAAYHDDPYQSTRPYDKFWGRRTLASASYEYTPN ASQKLNVTGFFTKTLRSGYLDQGRNLTLSPREYWVRGLETRFSQGFELGESRHEVGIG HRYVNEASHELRYWTRADSGQLPSTGSRNDRDTRGSTEANAFYIDDRIDIGNWTITPG IRYEKIDSEQKNLLKNSKDSGRYNASLPALNVIYHLTPSWNLYANTEGSFGTVQYSQM GKAVRSGDIEPEKARTWELGSRYDDGILRAELGAFLINFDNQYESNQQTDSVTARGKT RHKGIEAAIAYDLADLDPLLSGFDVYASYAYVDASIREDGPNKGNQVPFSSKHKGTLG ANYRTGAWSYNLDGSFQTSQYADNANTESESADGSTGRIAGWMVWSARGTYDFGPQLN DLKLGLGVKNLFDRRYYTRSFDDNNKGLYVGQPRTLYVQASVGF" misc_feature 4369023..4369175 /gene="fecA" /locus_tag="PA3901" /note="Secretin and TonB N terminus short domain; Region: STN; smart00965" /db_xref="CDD:198033" misc_feature 4369158..4371188 /gene="fecA" /locus_tag="PA3901" /note="Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; Region: FecA; COG4772" /db_xref="CDD:443804" gene complement(4371287..4371748) /locus_tag="PA3902" /db_xref="GeneID:878927" CDS complement(4371287..4371748) /locus_tag="PA3902" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252591.1" /db_xref="GeneID:878927" /translation="MNGVSRLLSLALLGAALHWAPAQAEEQPRLFELLGQPGYKATWH AMFKGESDVPKWVSDASGPSSPSTSLSLEGQPYVLANSCKPHDCGNNRLLVAFRGDKS AAYGLQVSLPDEPAEVMQTPSKYATYRWYGEPSRQVRELLMKQLESDPNWK" misc_feature complement(4371296..4371649) /locus_tag="PA3902" /note="Inhibitor of vertebrate lysozyme (Ivy); Region: Ivy; pfam08816" /db_xref="CDD:430234" gene 4371969..4373552 /gene="prfC" /locus_tag="PA3903" /db_xref="GeneID:878928" CDS 4371969..4373552 /gene="prfC" /locus_tag="PA3903" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="peptide chain release factor 3" /protein_id="NP_252592.1" /db_xref="GeneID:878928" /translation="MTTQAAEVAKRRTFAIISHPDAGKTTITEKLLLMGKAIAVAGTV KSRKSDRHATSDWMEMEKQRGISITTSVMQFPYREHMINLLDTPGHEDFSEDTYRTLT AVDSALMVLDGGKGVEPRTIALMEVCRLRDTPIVSFINKLDRDIRDPIELLDEIEAVL KIKAAPITWPIGCYKDFKGVYHLADDRIIVYVPGHGHERIETKVIEKLDSDEARAHLG DLYDNFVEELELVQGACHEFDKDAFLKGEMTPVFFGTALGNFGVDQVLDCIVDWAPQP LSRATHERSVEPTEEKFSGFVFKIQANMDPKHRDRIAFMRICSGKYEKGMKMRHVRLG KDVKIADALTFFSSEREQLEEAYAGDIIGLHNHGTIQIGDTFSEGENFGFTGIPHFAP ELFRRVRLKDPLKSKQLRQGLQELAEEGATQVFFPERNNDIILGAVGVLQFDVVASRL KEEYKVECAYEAINVWSARWIECDDEKKLKEFKDKAFENLSVDGGGHLTYLAPTRVNL SLMEERWPDIRFRATREHH" misc_feature 4371972..4373546 /gene="prfC" /locus_tag="PA3903" /note="peptide chain release factor 3; Provisional; Region: prfC; PRK00741" /db_xref="CDD:179105" protein_bind 4373863..4373878 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="'Transcription factor binding site for NP_250121.; Evidence of regulation for: PA3907, PA3906, PA3905, PA3904, PA3908'" /bound_moiety="LasR" gene 4373938..4374333 /locus_tag="PA3904" /db_xref="GeneID:878950" CDS 4373938..4374333 /locus_tag="PA3904" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252593.1" /db_xref="GeneID:878950" /translation="MSGKPAARLGDPTACPLPGHGSNPIVGGSPDVFFDHLSAARQGD ATACGATLSANVIANVLINGKPATVVGSVGTHGNLVVGGAGTVLIGNSGGGAPALALA PPKLCLQCLLLAARRNQALVPLESLGGAP" misc_feature 4373950..4374189 /locus_tag="PA3904" /note="proline-alanine-alanine-arginine (PAAR) domain with C-terminal extension; Region: PAAR_CT_1; cd14743" /db_xref="CDD:269828" misc_feature order(4373950..4373961,4374049..4374060,4374133..4374144) /locus_tag="PA3904" /note="PAAR motifs; other site" /db_xref="CDD:269828" misc_feature order(4373980..4373982,4374070..4374072,4374079..4374081, 4374163..4374165) /locus_tag="PA3904" /note="putative Zn binding site [ion binding]; other site" /db_xref="CDD:269828" gene 4374330..4374857 /locus_tag="PA3905" /db_xref="GeneID:878951" CDS 4374330..4374857 /locus_tag="PA3905" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252594.1" /db_xref="GeneID:878951" /translation="MSRLQPALAAPTPDSRLFALADGARYLTLDTRLEKAAGEIRSRW LLAGSELDEIAHAGPVLIEFMDSAPLSSSGEFLGWLRDWDRRSPMASWLWSRASFENL AKHFAGLLFTRMPDGRRALLRYYSPEVRRALEQVMTARQWTQVMAPLERWQVWQPLQG GYLVYDRETERTADA" misc_feature 4374381..4374761 /locus_tag="PA3905" /note="Domain of unknown function (DUF4123); Region: DUF4123; pfam13503" /db_xref="CDD:433262" gene 4374850..4375233 /locus_tag="PA3906" /db_xref="GeneID:878940" CDS 4374850..4375233 /locus_tag="PA3906" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252595.1" /db_xref="GeneID:878940" /translation="MLELDAGQLDRLQRVRDDEVIERVLLEVRREAPAWLERRGLLPA IRQLGELRATALELGIEEPGTIERFLLHGLAFPAFQDTPAFLAHMRRPLADSPEQRFQ DYERIVEFRLASQKWRAYETSGRPA" gene 4375230..4376015 /locus_tag="PA3907" /db_xref="GeneID:878941" CDS 4375230..4376015 /locus_tag="PA3907" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252596.1" /db_xref="GeneID:878941" /translation="MSGIGALFRPLPRMGPRLPFELPAPPRPHLPMPAPRPLPRPAPG ALPRPVPRPMPVPQTLPRTETGTLSRDRTREAERDCSKSQGRDKDCVECPPSRGEMAI ANNGKGHSMSDLSARYQQWVTNFPFPHEWFWSGTWWDGFDEPRCTLLEAKANYAFLFV PLLGVPRPWARAKVKSDLLQKAEVHSDKARPTPPVFVEWHFLQRIVYEYCAAEYLRMG LANLKAFWNPMPGTDEHDDYQETRAKEQEEMKRFCEENPGYCA" misc_feature 4375572..4375838 /locus_tag="PA3907" /note="Restriction endonuclease fold toxin 5; Region: Tox-REase-5; pfam15648" /db_xref="CDD:464785" gene 4376012..4376731 /locus_tag="PA3908" /db_xref="GeneID:878965" CDS 4376012..4376731 /locus_tag="PA3908" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252597.1" /db_xref="GeneID:878965" /translation="MTDAKAFRRYIFELYFDPARLLELDDDQHLQRIERFLDALAPLH PVLENWYLCGDSLRDALSHNVTEHRQDLAKALSRDRRTRAVELVLWNGEEDPLKGGLS LDYEASGRAVSSRLQLEDAGSLLQVFDAPASSFVAIFLAVLEIWPETTWGMLAPHAYF VHQRTFPDRRSIGWIGFCPHPLRATDFPAATELVDIPGRGTLLLNGREPMDETRREHF ERVGEADIKLMELGYLPPLRG" misc_feature 4376426..4376713 /locus_tag="PA3908" /note="Immunity protein 52; Region: Imm52; pfam15579" /db_xref="CDD:406106" gene complement(4377311..4379650) /gene="eddB" /locus_tag="PA3909" /db_xref="GeneID:878966" CDS complement(4377311..4379650) /gene="eddB" /locus_tag="PA3909" /note="'Product name confidence: class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene'" /codon_start=1 /transl_table=11 /product="extracelullar DNA degradation protein EddB" /protein_id="NP_252598.1" /db_xref="GeneID:878966" /translation="MHPLRNAALLGGLALLGLPVANAAELIISEYVEGSGNNKALEFY NSGSQVLDLSAYRVEFYFNGASAAGRSIDLSGSLAPGKTFVLANGVADPALLALASQR VEGSWFNGNDAVLLRRRGGEILDSLGQVGFNPGTTWGSGDVQTLDRSLVRKADIRDGD SDPSDAFDPAAQWLGYPRDTFANLGQHGAGEPGGEEAGLRPIHEVQGAGAESPLVNQR VAIEGVVVGDFQNASELKGFYVQQEDATVDGDPATSEGIFVYDGGNGSDVKLGDRVRV TGQVREFNGLTELVGPLQVSVLASGVALPTPAGISLPLASADALERYEGMRVQLRQTL TVNEVYNLGRYGEVLLSSGGRQMTPTNVVAPGEQAKAMQARNDLDRILLDDGRSGQNP DPIRYPAPELSAYNSLRVGDRTSAIDGVLDYSAGSYRIQPLQTPTFEAANPRPAQPAV EGRLRVASFNVLNYFNGDGKGGGFPTSRGANTAEEFQRQKAKIVAAILASKADIVGLM EIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGSDEIAVGLIYRGDKVRT YRSAAVLDSSVNPEFDDTRNRPTLAQTFQEINGGERLTIAVNHLKSKGSACDGDPDTG DGQGNCNLTRARAAQALVGWLAGDPTGAKEPDRLIIGDLNSYAKEDPVNVIRSAGYTD LVARQAGAGKGYSYVFSGQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNVEF KTPRQQDSLYNAEPYRASDHDPVVIGIDLRRVAMKKHRR" misc_feature complement(4379264..4379593) /gene="eddB" /locus_tag="PA3909" /note="Lamin Tail Domain; Region: LTD; pfam00932" /db_xref="CDD:460003" misc_feature complement(4377344..4378990) /gene="eddB" /locus_tag="PA3909" /note="ExeM/NucH family extracellular endonuclease; Region: ExeM_NucH_DNase; NF033681" /db_xref="CDD:468139" gene complement(4379687..4381249) /gene="eddA" /locus_tag="PA3910" /db_xref="GeneID:878963" CDS complement(4379687..4381249) /gene="eddA" /locus_tag="PA3910" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="extracelullar DNA degradation protein EddA" /protein_id="NP_252599.1" /db_xref="GeneID:878963" /translation="MSGMDLKRRRVVQGLGAGLLLPALGAPAVIASPRARPKLTDGVQ SGDVQGDRALVWSRTDRPARMIVEWDTRSVFSEPRRLVSPVTDERLDYTARIDLRGLP ADQSIFYRVRFEDARDGSLSKPWFGHLRSAPSEARNIRFVWSGDTCGQGFGINPDIGG MRIYEAMRRRQPDFFLHSGDTIYADGPIPERIETESGRIWRNRVTEAKSKVAETLDEF RGNYRYNLLDDNLRRFNAEVPQIWQWDDHETTNNWSSSKQLDERYQVKDIDVLAARAR QAFLEYAPLRFQRQGRDGRIYRKVAYGPLLDVFVLDMRSYRGGNSANLQARRSAATDF LGREQLQWLKRELRGSRAQWKVIAADMPIGLCVPDGKDAQGRDRWEAIANGNDGAALG RELEIADLLRFVQRAGVRNTVWLTADVHYCAAHHYSPERAAFKDFAPFWEFVAGPLNA GSFGPNALDGTFGPQVMFQKAPLVQNSSPFAGYQFFGEVEIDAQSRALTVTLRDLDGE PVFSQELQPDGA" misc_feature complement(4379723..4381234) /gene="eddA" /locus_tag="PA3910" /note="Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]; Region: PhoD; COG3540" /db_xref="CDD:442761" gene complement(4381501..4382016) /locus_tag="PA3911" /db_xref="GeneID:878964" CDS complement(4381501..4382016) /locus_tag="PA3911" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252600.1" /db_xref="GeneID:878964" /translation="MLNRQRLLLGVAGRLLPLAAKVPRGLQHLVLQRVANRLFAQPLE EGAFDLLEGRWLRLEVRDLGVGWCVTRVPGGLRLVERPRASVTIRGDWRDFLLLASRH EDPDTLFFRRRLVIEGDTELGLAVKNLLDSLDPEHLPPWLWNAVERAGRAVQEERGEA PQGPVQGARGG" misc_feature complement(4381525..4381974) /locus_tag="PA3911" /note="Ubiquinone biosynthesis accessory factor UbiT, lipid carrier SCP2 domain [Coenzyme transport and metabolism]; Region: UbiT; COG3154" /db_xref="CDD:442388" gene complement(4382010..4382900) /locus_tag="PA3912" /db_xref="GeneID:878971" CDS complement(4382010..4382900) /locus_tag="PA3912" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252601.1" /db_xref="GeneID:878971" /translation="MKLSLGPLLFYWDKRQIFDFYAEMAGQPLDVIYLGETVCAKRRA LSLNDWQALARELAQATRAELVLSGLALIEAASELSSLRRLCENGELRVEANDMAAVY YLSQRGVPFVGGPALNLYNGHALAELYSWGMRRWIPPVEVSGKLLRGVLDQAAQLGLE QLQTEVFAYGHLPLAYSARCFTARAENRPKDDCQFCCQQYPEGIPLLSQEGEALFTLN GIQTMSGKVSNLLADYRSLEHSGADLLRLSPRAQGMAEVIAAFDRVRKGAAPPLAVEG CNGYWHGRPGMLRAEEAGLC" misc_feature complement(4382025..4382900) /locus_tag="PA3912" /note="putative protease; Provisional; Region: PRK15447" /db_xref="CDD:237968" gene complement(4382912..4383907) /locus_tag="PA3913" /db_xref="GeneID:878972" CDS complement(4382912..4383907) /locus_tag="PA3913" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="protease" /protein_id="NP_252602.1" /db_xref="GeneID:878972" /translation="MQLVCPAGSLPALKSALRQGADAIYVGFRDDTNARHFAGLNLDE RQLQEGLRRVHEAGRQLYVAVNTYSSAQGWERWQRAVDQAADLGVDALIAADVAVLGY AAKRHPRLNLHLSVQGSATNAAALALYHERYGIRRAVLPRVLSLAQVRQVAAGSPVPV EVFAFGSLCIMAEGRCHLSSYVTGESPNLCGVCSPARAVRWSEEPEGLTSRLNEVLID RYAAGEAAGYPTLCKGRFLVNGQRFHALEEPTSLNTLDLVPQLAEIGVAAVKIEGRQR SPAYVEQVTRVWRQALDSYASAPGAYSVQPQWQRALAGLSEGHQTTLGAYHRSWQ" misc_feature complement(4382924..4383907) /locus_tag="PA3913" /note="23S rRNA C2501 and tRNA U34 5'-hydroxylation protein RlhA/YrrN/YrrO, U32 peptidase family [Translation, ribosomal structure and biogenesis]; Region: RlhA; COG0826" /db_xref="CDD:440588" gene complement(4384022..4385245) /gene="moeA1" /locus_tag="PA3914" /db_xref="GeneID:878989" CDS complement(4384022..4385245) /gene="moeA1" /locus_tag="PA3914" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein A" /protein_id="NP_252603.1" /db_xref="GeneID:878989" /translation="MSACACDGGQLRPLDEALAELLARAPRPPACESLALERALGRVL GEDLLAPMDLPHWDNSAMDGYALCSADLPRSGGSLTVGARIAAGDTRGMSLPLGQAAR IFTGAPLPTGADCVVPQELCVVDGERVQLPPVSAGQHVRRRGEELRRGAPVLRAGQRL RPQELGLLASLGVATVSVRRRLRIGLLSSGDELREPGQTLLAGQIYNANRYCIGALLR GLGFEVHDEEVLADELVASRDALSLAASEWDALVTSGGVSVGEEDHLKRAIAELGEVN LWRLAIQPGKPFAFGSVAGKPWLGLPGNPAAALVTALLVARPFLLRQQGLFDVVPRPL ALPAAFDWPQPRARRQYLRARLDERGRVEIHPQQGSAMLLAASWADGLAVIERGATLG VGDAIDFLPFSALMA" misc_feature complement(4384031..4385215) /gene="moeA1" /locus_tag="PA3914" /note="Molybdopterin Mo-transferase (molybdopterin biosynthesis) [Coenzyme transport and metabolism]; Region: MoeA; COG0303" /db_xref="CDD:440072" gene complement(4385242..4385799) /gene="moaB1" /locus_tag="PA3915" /db_xref="GeneID:878990" CDS complement(4385242..4385799) /gene="moaB1" /locus_tag="PA3915" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein B" /protein_id="NP_252604.1" /db_xref="GeneID:878990" /translation="MSHLATSTFQPLNIAILTVSDTRTLETDTSGQTLADALLAAGHR LHQRSLKTDDIYQIRAVVSAWIADPEVQVGLITGGTGFTARDNTPQAVGPLFERDVEG FGELFRQVSQREIGTSTIQSRALAGLSNGTLVCCLPGSPGACRTAWNEILLAQLDSRT RPCNFVPHLKTPPAVAPVAGCGCRS" misc_feature complement(4385290..4385778) /gene="moaB1" /locus_tag="PA3915" /note="molybdenum cofactor biosynthesis protein B, proteobacterial; Region: moaB_proteo; TIGR02667" /db_xref="CDD:131715" misc_feature complement(order(4385362..4385364,4385371..4385373, 4385383..4385388,4385467..4385469,4385557..4385565)) /gene="moaB1" /locus_tag="PA3915" /note="MPT binding site [active]" /db_xref="CDD:238451" misc_feature complement(order(4385431..4385433,4385440..4385442, 4385473..4385478,4385485..4385487,4385500..4385508, 4385530..4385532,4385542..4385544,4385548..4385553, 4385557..4385559)) /gene="moaB1" /locus_tag="PA3915" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:238451" gene complement(4385900..4386352) /gene="moaE" /locus_tag="PA3916" /db_xref="GeneID:878985" CDS complement(4385900..4386352) /gene="moaE" /locus_tag="PA3916" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="molybdopterin converting factor large subunit" /protein_id="NP_252605.1" /db_xref="GeneID:878985" /translation="MAIRVQQAAFDPGQELNALHAQNVGIGAVVGFVGYVRDFNDGRE VGGMFLEHYPGMTEKALGKIAAEAGQRWPLLRLEILHRIGRLEPGEPIVFVGCASAHR QAAFDACNFVMDYLKTRAPFWKKEDTAEGPRWVEGRCSDQAAAQRWEE" misc_feature complement(4385927..4386352) /gene="moaE" /locus_tag="PA3916" /note="Molybdopterin synthase catalytic subunit MoaE [Coenzyme transport and metabolism]; Region: MoaE; COG0314" /db_xref="CDD:440083" gene complement(4386357..4386608) /gene="moaD" /locus_tag="PA3917" /db_xref="GeneID:879013" CDS complement(4386357..4386608) /gene="moaD" /locus_tag="PA3917" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="molybdopterin converting factor small subunit" /protein_id="NP_252606.1" /db_xref="GeneID:879013" /translation="MIRVQYFARYREALGIDGEQLNWDAGLATLGALRQLLVERGGAW ERTLGEQNLMCARNQELCGLDEPLQDGDEVAFFPTVTGG" misc_feature complement(4386360..4386608) /gene="moaD" /locus_tag="PA3917" /note="Molybdopterin synthase sulfur carrier subunit MoaD [Coenzyme transport and metabolism]; Region: MoaD; COG1977" /db_xref="CDD:441580" gene complement(4386605..4387087) /gene="moaC" /locus_tag="PA3918" /db_xref="GeneID:879014" CDS complement(4386605..4387087) /gene="moaC" /locus_tag="PA3918" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein MoaC" /protein_id="NP_252607.1" /db_xref="GeneID:879014" /translation="MLTHLDSQGRANMVDVTEKAVTSREATAEAVVRMRPETLQLIQD GGHPKGDVFAVARIAGIQAAKRTHELIPLCHPLLLTSVKLELQAEAPDAVRIRARCRL AGQTGVEMEALTAASVAALTIYDMCKAVDRGMVIEQVQLLEKLGGKSGHYRKEEEGQA " misc_feature complement(4386620..4387087) /gene="moaC" /locus_tag="PA3918" /note="cyclic pyranopterin monophosphate synthase MoaC; Region: moaC; PRK09364" /db_xref="CDD:236483" misc_feature complement(order(4386647..4386682,4386833..4386853, 4386860..4386937,4387040..4387051)) /gene="moaC" /locus_tag="PA3918" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:238708" misc_feature complement(order(4386689..4386697,4386875..4386889, 4386935..4386943)) /gene="moaC" /locus_tag="PA3918" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238708" misc_feature complement(order(4386704..4386706,4386713..4386715, 4386746..4386748,4386755..4386763,4386770..4386772, 4386863..4386868,4386872..4386874,4386893..4386895, 4386941..4386943)) /gene="moaC" /locus_tag="PA3918" /note="putative active site [active]" /db_xref="CDD:238708" gene complement(4387336..4388727) /locus_tag="PA3919" /db_xref="GeneID:879021" CDS complement(4387336..4388727) /locus_tag="PA3919" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252608.1" /db_xref="GeneID:879021" /translation="MDDHGRSRPTQPTLYVLDTNVLIHDPNALLNFQEHRVAIPMTVL EELDKLKTGKHTIAAECRQAIRLIDQVLGEATPEQVEGGVPIQRGKNGPSGSLSILMS KRAEPITWLPEHLNDNKIINQLVELKSRHSGVRVVLVTKDINMRLKARACGVDAEDYH TDQLIDDVALLSRGYHSLAGSFWDRVSKVETRQDHGRTWHRVQLTDNLPAVHINEFIV DEQGFVGWIKGIQQDELTILDLHQEPLLHQEAWGLRPRDVYQSLALYALLDPDIHLVN LSGAAGSGKTILALAAAIEQTMVSKRYRRIIATRSVQGLDEDIGFLPGTEAEKMEPWL GAITDNLEALHMDDECTHGSVDYILSKVPLQFKSLNYIRGRSFQQSLILIDECQNLTP HQMKTIITRAGSGSKVICLGNLAQIDTPYLSATSSGLTYLTERFKDFPHGVHVTLQGV PRSVLAEYAEAHM" misc_feature complement(4387339..4388688) /locus_tag="PA3919" /note="Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains [General function prediction only]; Region: YlaK; COG1875" /db_xref="CDD:441479" gene 4389231..4391609 /locus_tag="PA3920" /db_xref="GeneID:879022" CDS 4389231..4391609 /locus_tag="PA3920" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="metal transporting P-type ATPase" /protein_id="NP_252609.1" /db_xref="GeneID:879022" /translation="MNSATLTELDLPVSGMTCASCAGRVERALKKVPGVAAASVNLAS EQARVQAPADSLPALVAAVEQAGYQVPARSLELSIEGMTCASCVGRVERALKKVPGVR EVSVNLASERAHLELLGAVDSQALLQAVEQAGYKARLLDAGQPRQDDAERRLRRERWW VIAALLLALPLVLPMLVEWAGLHWMLPPWAQFLLATPVQFVIGARFYVSAWRAVKAGA GNMDLLVALGTSAGYGLSVYLWLTAPPGHMPHLYFEASTVVIALILLGKYLESRAKRQ TASAIRALEALRPERAVRLRDGREEEVAIAELRLGDEVVVRPGERFPVDGEVLDGSSH ADEALITGESLPVPKAPGDKVTGGAINGEGRLLLRTTALGGETVLAKIIRLVEDAQAA KAPIQKLVDKVSQVFVPVVILIALVTLGAWLVAGVGLEQALVNAVAVLVIACPCALGL ATPTAIMAGTGVAARHGILIKDAESLEVAHAVTSVAFDKTGTLTSGRPQIIHLGGDDQ EQLLRLAGALQRGSEHPLAKAVLERCAERDLEVPPVNASQALSGRGIQGEVEGRRLAL GNRRLLDEQELKPGALASAAADWEAEGRTLSWLLELAPEKRVLGLFAFGDSLKDGAAE AVEALRGRDIHSHLITGDNRGSAAVVAKALGIDDVHAEVLPADKAATVAELKGRGRVV AMVGDGINDAPALAAADVGIAMGGGTDVAMHAAGITLMRGDPRLVPAALDISRRTYAK IRQNLFWAFIYNVIGIPLAAFGLLNPMVAGAAMAFSSVSVVGNALLLRRWKP" misc_feature 4389249..4389440 /locus_tag="PA3920" /note="Copper chaperone CopZ [Inorganic ion transport and metabolism]; Region: CopZ; COG2608" /db_xref="CDD:442020" misc_feature 4389447..4391606 /locus_tag="PA3920" /note="Cation-transporting P-type ATPase [Inorganic ion transport and metabolism]; Region: ZntA; COG2217" /db_xref="CDD:441819" gene complement(4391641..4394361) /locus_tag="PA3921" /db_xref="GeneID:879010" CDS complement(4391641..4394361) /locus_tag="PA3921" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252610.1" /db_xref="GeneID:879010" /translation="MTDFSRTFSGTPSAVLPTANRFFRPPLPSAHVARPRLCRRLRDG LDGRLLLIAAPAGFGKSSLAIEFCESLDPRWQSLWLGLSSRESDPGRFLERLLDGLRQ YHPTLGEEALGLLKMRQRHQPFAFETWLDDLLDELAPCLDPQRPLLLVLDDYHLAQGA VLDRCLQFLLNHLPEGLVLLVTSRQRPDWHLARLRLSRQLLELSEQDLRLTAEESGAL MAASGLELDEDALDALLERSEGWVAGLRLWLLARGDPEEQVSPGVHGADELIRDYLLE EVIERQPPEVQAFLAQTARFERFCAELCDTVREAGDSAAILDHLQQHQVFLVPLDENG QWFRYHHLFSDLLLARPLPDFGPSAGSLHLRACGWFSRHGLLDQAVEQALRAGQPDVA ASLVQNLSEEQLLAEQNIATLLRWKMDLPDSLLASTPRLILLYGWALALACQLDAAEE LAGQLARFLPAPDESAQRDLLAQWQALSGVIARGRGDIDKAEAHCREALQDLAGERYG TRLQCLSTLSNLAVTRGDFWQARNYNRDALEFAQRYGNPLFEALVHYDRARVLQARGE VARAEEEVRQGLERLQHLPAQRRYAVRGRLLLYRGYLRSLALQPDEARKWIKQGIEET RSCRDVSLVIGYCVLASLEGRLGNYAAAFARLGDVERLMHAWDIPPIYYLAAITLIKC ELWLAQGQTELAGVWLQRLGGTYGGQAATPPECSPLLPLHVELLQAGLERREGRPEEA ARRLDRLARSTRENGALLPARLALGQLAALHLEQGREREALATLQQAMEGAVGGALLP LHELLVQQPEWLREQLQRFPACPGAQRMRALLPEPPAEPAGSAGEVLSGRELAVLELI AQGLSNQEISERLFISLHTVKSHARHINDKLGVERRTQAVARAKHMGLLR" misc_feature complement(4391656..4394301) /locus_tag="PA3921" /note="HTH-type transcriptional regulator MalT; Region: PRK04841" /db_xref="CDD:235315" misc_feature complement(order(4392673..4392675,4392682..4392687, 4392694..4392699,4392706..4392708,4392793..4392798, 4392802..4392807,4392814..4392819,4392826..4392828, 4392913..4392915,4392919..4392924)) /locus_tag="PA3921" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature complement(4392742..4392834) /locus_tag="PA3921" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(4392625..4392711) /locus_tag="PA3921" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" protein_bind complement(4394418..4394430) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3921" /bound_moiety="AmrZ" gene complement(4394694..4396061) /locus_tag="PA3922" /db_xref="GeneID:879011" CDS complement(4394694..4396061) /locus_tag="PA3922" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252611.1" /db_xref="GeneID:879011" /translation="MKTTKILLHTGVLALSLLATQVMAAVSADEAAKLGTSLTPLGAE KAGNADGSIPAWDGGLATNAGSVDSRGFLANPYASEQPLFTITAQNVDQYKDKLTPGQ LAMFKRYPDTYKIPVYKTHRSATVPAAVQEAAKRNATTTKLVEGGNGLENFDTANPFP IPQNGLEVIWNHITRYRGGSVRRLVTQATPQVNGSYQLVYFQDAFTFRTNLKDYNPNK PSNVLFYFKQRVTAPSRLAGNVLLVHETLNQVKEPRLAWLYNAGQRRVRRAPQVSYDG PGTAADGLRTSDNFDMYNGAPDRYDWKLEGKKEIYIPYNSYKLDDPKIKYSEIVKAGH INQDLTRYELHRVWHVVATLKPGERHIYAKRDFYIDEDTWQAAEIDHYDGRGTLWRVA EAHAEQYYDKQVPWYAVETLYDLLSGRYLALGMKNEEKQAYDFNYSASESDYTPAALR QEGVR" misc_feature complement(4394712..4395809) /locus_tag="PA3922" /note="Protein of unknown function (DUF1329); Region: DUF1329; pfam07044" /db_xref="CDD:429261" gene complement(4396122..4398047) /locus_tag="PA3923" /db_xref="GeneID:879042" CDS complement(4396122..4398047) /locus_tag="PA3923" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252612.1" /db_xref="GeneID:879042" /translation="MTTRNPFSRRARLPLAVSLASSLAAPAFGVTFNIGEIEGSFDSA LSVGASWSTAKPNKNLIGVNNGGKGLSQTSDDSHLNFKRGETFSKVFKGIHDLELKYG DTGVFLRGKYWYDFELKDEHREFKDIDDSGRKTLAKSSGAELLDAFIYHNYAIGDLPG SVRLGKQVVNWGESTFIQNGISAINPIDVTAFRRPGSEIKEGLIPVNMFYLSQNLTDN LSAEGFYQIEWDQTVVDNCGTFFSQPDVVADGCDQNLAVLTNNKASINLLNNVLAGAG LSVTPSPWDEGILVRRGPDRDARDSGQYGFALRYFADELNTEFGAYYMNYHSRLPIFS GQGASASTMAAINDLATRLAAINPALAAQAAAAATAGNSSYFIEYPEDIRMFGLSFST TLPNGTAWSGEVSYRPNAPVQLNTTDILFAGLDPVSIGGNRPYDNASVLNGQAGQDLH GYRRKEITQLQTTLTHFFDQVMGAERLTLVGEIGWTHVGGLESTSKARYGRDPVFGPG PLPGTISGLASCQALNVSTLGTAEANNVSRYCENDGYTTSDAWGYRARAIWDYNDVFM GVNLKPSVAWSHDVDGYSPGPGANFEEGRKAVSLGVDAEYQNTYTASLSYTNFFDGKY TTVDDRDFVALSFGMNF" misc_feature complement(4396590..4398020) /locus_tag="PA3923" /note="Protein of unknown function (DUF1302); Region: DUF1302; pfam06980" /db_xref="CDD:462059" gene complement(4398259..4399941) /locus_tag="PA3924" /db_xref="GeneID:879043" CDS complement(4398259..4399941) /locus_tag="PA3924" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="long-chain-fatty-acid--CoA ligase" /protein_id="NP_252613.1" /db_xref="GeneID:879043" /translation="MLKTRLIPAAAGAYQYPLLIKSLMLSGRRYEKSHEIVYRDQVRY SYATFNERVARLANVLSEAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVLHTINIRL SPEQILYTMNHAEDRFVLVNSEFVPLYQAVAGQLATVERTILLTDGAEKSAELPGLVG EYESLLAAASPRYDFPDFDENSIATTFYTTGTTGNPKGVYFSHRQLVLHTLAMASTIG SLDSIRLLGTSDVYMPITPMFHVHAWGTPYVATMLGVKQVYPGRYDPELLVELWKREK VTFSHCVPTILQMVMNARAAQGVDFKGWKVIIGGSALNRSLYEAAKARGIQLTAAYGM SETCPLISCAYLNDELLAGSEDERTTYRIKAGVPVPLVDAAIMDEQGRFLPADGESQG ELVLRSPWLTQGYFREPERGEELWRGGWMHTGDVATLDGMGFIEIRDRIKDVIKTGGE WLSSLELEDLISRHPAVREVAVVGVPDPQWGERPFALLVVREGQQLDARGLKEHLKPF VEQGNINKWAIPSQIAVVTDIPKTSVGKLDKKRIRIEIAQWQEAGSAFLSTV" misc_feature complement(4398292..4399905) /locus_tag="PA3924" /note="long-chain-fatty-acid--CoA ligase; Validated; Region: PRK06187" /db_xref="CDD:235730" misc_feature complement(order(4398643..4398645,4398679..4398681, 4398685..4398687,4398724..4398756,4398823..4398825, 4398832..4398840,4398928..4398930,4399183..4399188, 4399309..4399311,4399318..4399320,4399327..4399332, 4399336..4399347,4399384..4399386,4399393..4399395, 4399399..4399404,4399660..4399662,4399732..4399734, 4399840..4399842,4399849..4399854,4399864..4399869)) /locus_tag="PA3924" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:341284" misc_feature complement(order(4399351..4399356,4399360..4399377, 4399384..4399386)) /locus_tag="PA3924" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341284" misc_feature complement(order(4398391..4398393,4398589..4398600, 4398622..4398624,4398631..4398633,4398667..4398669, 4398937..4398954,4399012..4399017,4399075..4399077, 4399084..4399089,4399093..4399095,4399231..4399236, 4399375..4399377)) /locus_tag="PA3924" /note="putative active site [active]" /db_xref="CDD:341284" misc_feature complement(order(4398589..4398591,4398604..4398606, 4398616..4398618,4398622..4398624,4398667..4398669, 4398937..4398954,4399006..4399014,4399375..4399377)) /locus_tag="PA3924" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341284" misc_feature complement(order(4398391..4398393,4398424..4398426, 4398592..4398600,4399015..4399017,4399075..4399077, 4399084..4399089,4399234..4399236)) /locus_tag="PA3924" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:341284" gene 4400123..4401298 /locus_tag="PA3925" /db_xref="GeneID:879047" CDS 4400123..4401298 /locus_tag="PA3925" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA thiolase" /protein_id="NP_252614.1" /db_xref="GeneID:879047" /translation="MSDIVIVAGARTPMGGFQGSLAGVSAVDLGAVAIREAVQRAGIA AEDVQEVIMGCVLPAGLKQGPARQAALAAGLPAATGCTTINKLCGSGMKAVMLAHDLL KAGTNQVMVAGGMESMSNAPYVLEKARSGLRMGHGEIKDHMFLDGLEDARTGRLMGSF AQETADKYGVTREEMDAYAIESLKRAQAAIADGSLAAEIVPVTVTSRKGESVVKDDEQ PLTANLEKIPSLRPAFRKDGTITAANASSISDGASALVLMTAEEAQRRGLKPLARIVG HATQSQDPSEFTLAPIGAMTNLFARTGWSKDDVDLFEINEAFAMVTMLAMREHGLDHA KVNVYGGACAQGHPVGSTGSRIILTLINALRQKGGKRGVASLCIGGGEATAVALELL" misc_feature 4400132..4401295 /locus_tag="PA3925" /note="acetyl-CoA C-acetyltransferase; Region: PRK06954" /db_xref="CDD:180775" gene complement(4401355..4402536) /locus_tag="PA3926" /db_xref="GeneID:879048" CDS complement(4401355..4402536) /locus_tag="PA3926" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_252615.1" /db_xref="GeneID:879048" /translation="MNRPRTVIRFINAAHVIDHMFMLIFPAAVLGMAGSFDLDYAGLI GLSLGGFIAFGACSLPAGWLGDTWSRRRMMLLFFFGIGAAALLTGLAGSVPMLVTGLT LIGVFAAIYHPVGTAMLVAHAENRGREIGINGMWGNLGVAFAALLTGFLTAHFGWRAA FILPGGVAILLGIGFFFCVREEPSPHLSAKAAARGEDSEGLSMRRVFGVLALVTATGG VVFNASTVTYPKLFQERLSDLLASPQTLGVVVSLAYAFGAVAQLIMGRLIDRLNLKLP FVFLTFCQVPLLLALAYGHGSAVVLFGALFMFAVFGQVTVNDAMVAHFVAPQWQARVF ALRYFLSFGASAAAIPMIAYLEPRQGLLGLYLVLAGFAALTFAAALVFPRPARSAAVG T" misc_feature complement(4401376..4402500) /locus_tag="PA3926" /note="Sugar phosphate permease [Carbohydrate transport and metabolism]; Region: UhpC; COG2271" /db_xref="CDD:441872" gene 4402638..4403426 /locus_tag="PA3927" /db_xref="GeneID:879065" CDS 4402638..4403426 /locus_tag="PA3927" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252616.1" /db_xref="GeneID:879065" /translation="MLIEHRPDGLLAAISLDFPDGHHLGRHFHPQAQFLYAARGLMRL ATHHGAWVIPPTRAVWIPPRVEHEIFMSGEVHMRTLFIEQPETPTPLSDCCVLAVTPL LREMILRAIHLESQPRLDDFCQRLQGLILSEIANLERMPLYLPMPRDRRLQAICQALL KQPELGLTLDDWGLRVGASSRTLARLFAQELQMSFHEWRQQLRLTEALPRLLAGDSVQ VVARDLGYGSTRAFSSMFRRLLGETPRDYLGRLEQLARVRGRED" misc_feature 4402668..4402952 /locus_tag="PA3927" /note="AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain; Region: cupin_NimR-like_N; cd06124" /db_xref="CDD:380379" misc_feature 4403160..4403387 /locus_tag="PA3927" /note="Helix-turn-helix domain; Region: HTH_18; pfam12833" /db_xref="CDD:432818" gene complement(4403707..4403877) /locus_tag="PA3928" /db_xref="GeneID:879066" CDS complement(4403707..4403877) /locus_tag="PA3928" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252617.1" /db_xref="GeneID:879066" /translation="MVRTPSHPERDSAAKPPLWRRLAWLAGIWTASVLALGVAAWLMR LFMSAAGLGVPH" misc_feature complement(4403719..4403832) /locus_tag="PA3928" /note="Protein of unknown function (DUF2474); Region: DUF2474; pfam10617" /db_xref="CDD:431397" gene complement(4403891..4404898) /gene="cioB" /locus_tag="PA3929" /db_xref="GeneID:879044" CDS complement(4403891..4404898) /gene="cioB" /locus_tag="PA3929" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="cyanide insensitive terminal oxidase" /protein_id="NP_252618.1" /db_xref="GeneID:879044" /translation="MGIDLPLIWAVIIIFGIMMYVVMDGFDLGIGMLYPFFKDSGDRD VMMNTVAPVWDGNETWLVLGGAALFGAFPLAYAVVLSALYLPLIFMLVGLIFRGVAFE FRFKAKPAKQHIWDKAFIGGSLVATFFQGVALGAFIEGIPVENRSFAGGSLDWIAPFP LFCGLALIVAYTLLGCTWLIMKTEGRLQERMHDLARPLALVLLAIIGVVSLWTPLAHA EIAARWFSLPNLFWFLPVPILVLVTFYALLRSVANNDHVKPFVLTLVLIFLGYSGLGI SLWPNIIPPAVSIWEASAPPQSQGFMLVGALFIIPFILGYTAWSYYVFRGKVKHGDGY H" misc_feature complement(4403903..4404886) /gene="cioB" /locus_tag="PA3929" /note="Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]; Region: AppB; COG1294" /db_xref="CDD:440905" gene complement(4404902..4406368) /gene="cioA" /locus_tag="PA3930" /db_xref="GeneID:879045" CDS complement(4404902..4406368) /gene="cioA" /locus_tag="PA3930" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="cyanide insensitive terminal oxidase" /protein_id="NP_252619.1" /db_xref="GeneID:879045" /translation="MFGLEAIDLARIQFAFTVSFHIIFPAITIGLASYLAVLEGLWLK TNEEVYRDLYHFWSKIFAVNFGMGVVSGLVMAYQFGTNWSHFSDFAGSITGPLLTYEV LTAFFLEAGFLGVMLFGWNRVGPGLHFFATVMVAIGTLISTFWILASNSWMQTPQGFE IVDGRVIPVDWLAVIFNPSFPYRLLHMSVAAFLATAFFVGASAAWHLLRGRDNPAIRK MLSMAMWMALIVAPVQALIGDAHGLNTLEHQPAKIAAMEGHWDNSSGEPTPLILFGWP DMQREETRFKVEIPVLGSLILKHSLTEPIPALKDFPPEDRPNSTVVFWSFRIMAGLGM LMILVGVWSLWLRWRGQDKLFNSKAFLRLTLLMGPSGLIAILAGWFTTEMGRQPWVVY GLMRTADASSAQSVTQMSLTLLTFVVVYFSLFGVGIGYMMRLVRKGPVTHEGRETNPG GAGQKRTPARPLSAAGEGFDEEHDGHAQAADRDQDKRN" misc_feature complement(4405031..4406359) /gene="cioA" /locus_tag="PA3930" /note="Cytochrome bd-type quinol oxidase, subunit 1 [Energy production and conversion]; Region: AppC; COG1271" /db_xref="CDD:440882" gene 4406806..4407585 /locus_tag="PA3931" /db_xref="GeneID:879071" CDS 4406806..4407585 /locus_tag="PA3931" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252620.1" /db_xref="GeneID:879071" /translation="MKKLLLLTALASVISVSASAAEKLIVAATPIPHAEILELIKPTL AKEGVDLQIKVFTDYVQPNVQVAEKRLDANYFQTLPYLENFNKGKGTNLVTVVGVHVE PFGGYSRKYKSLAELPDGATVAIPNEGSNSGRALLLLQKAGLLKLKDPNNALATPKDI AENPKNLKFKELESALLPRVLDQVDLDLINTNYALEAKLNPAKDALVLEDRDSPYVNY LVARPDNKDSDALKKLSAALTSPEVKAFIEKKYAGAVVPAF" misc_feature 4406848..4407582 /locus_tag="PA3931" /note="ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]; Region: NlpA; COG1464" /db_xref="CDD:441073" gene 4407760..4408734 /locus_tag="PA3932" /db_xref="GeneID:879072" CDS 4407760..4408734 /locus_tag="PA3932" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252621.1" /db_xref="GeneID:879072" /translation="MSEKPRPAPLTFPDADRSPLSIRAKALVFFDPRSHRVREELERL APQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPGT HNGPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDV RLVTATSVDLDQAVRAGKFLAGLQQYLHDGRLSLPPLRERPGDILPLAEYFIGVYAQR LDLPVPAIGVETQRVLESYPWPGNIRELENVVHFALLVSDKEEILPQHLNFGGTTPDP SLAGLRRLLGQAGAPSLEQVQALLLQLATEQAGGDEEAGRRRLGLAAN" misc_feature <4407838..4408722 /locus_tag="PA3932" /note="RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:443041" gene 4408924..4410885 /locus_tag="PA3933" /db_xref="GeneID:879067" CDS 4408924..4410885 /locus_tag="PA3933" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="choline transporter" /protein_id="NP_252622.1" /db_xref="GeneID:879067" /translation="MNPPVFYGAAILILLFAAVVIGFPQRAGEWLLAAQTWASQTVGW YYLLAMTLYLIFVVVTALSGYGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCV SEPLTHFLQPPQGEAGTQEAARQAMELLFLHWGLHGWGVFALVAMALAYFAYRHNLPL ALRSALYPLIGKRINGPIGYTVDCFGIIATVFGLGADMGFGVLQLNSGLDYLYAIPHT HPVQMALIVLMMGAAISVAVSGVDKGIRILSDINMLLACSLLLFVLFAGPTQHLLNTL VQNVGDYLGHLPGKSFDLYAYGGPSDWLGSWTVFYWAWWIAWAPFVGLFIARISRGRT IREFVFGVLFIPLGFTLAWMSIFGNSALEQALGGASELGRVAIEQPSMALYQMLQNYP WSRAVITVTVLVSFVFFVTSADSGTVVLSTLSAHGGSADDDGPKWLRVFWGSVTALVT GGLLFAGSIDALKSAVVLTSLPFSLILLLMMWGLHKAFYMESQRQRARSHSLAPLMSG NGKRSGGWKRRLSQAVHFPSRDEVYRFMNDVVRPAISEVSEVFREKGLAVDAQLDPGN ASLSLEIGHGEQHRFLYQVLMRGYFTPSFARAGMGGLHLKNRRYFRAEVHLAEGSQDY DLMGYTKEQIINDMLDQYERHLQFLHLVR" misc_feature 4408924..4410882 /locus_tag="PA3933" /note="choline transport protein BetT; Provisional; Region: PRK09928; cl00569" /db_xref="CDD:469825" protein_bind 4410398..4410410 /locus_tag="PA3933" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(4410993..4413029) /locus_tag="PA3934" /db_xref="GeneID:879068" CDS complement(4410993..4413029) /locus_tag="PA3934" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252623.1" /db_xref="GeneID:879068" /translation="MQERIPDELTLPELTLRGLILGALITVVFTASNVYLGLKVGLTF ASSIPAAVISMAVLRYFSGANILENNMVQTQASAAGTLSSIIFILPGLLMIGYWSGFP FWQTAAICSIGGILGVLYTIPLRRVMVVQSELPYPEGVAAAEILRVGSDGAEDEEDAR APRAAGNAPGLYDILGGGLVAALFSLWSSGFKVLAEGFSVWLSAGQAAFRLSTGFSLA LVGAGYLMGITAGIAILIGVVISWGVAVPLLTVNSVPADGQSLSDLATQLWSSQVRFL GAGTIGVAALWTLATLFKPMVRGVWASLGAVRGNSQANSLRTELDMPAKWILLIAGIL LVSLFVVFSHFLGAAAPDMASPQFWSLVAVCVVFAFFFGFLIAAACGYMAGLVGSSSS PISGIGIIAVILVSLLILGFGSIEGGLLDRQNGKLAIALALFTTSVVLAIAAISNDNL QDLKTGYLVGATPWRQQVALIVGCIVGALVIPPVLELLYSAYGFTGALPREGMDPGQA LAAPQATLMTAIASGIFHDALNWNMILIGVALGIALILVDLLLRRTGKACLPVLAVGL GIYLPPTIGMTLVVGALISWLLENALKKRAAAAGVDEEAYAEEPKRRGVLLASGLIVG ESLMGILLAGVIGATGEDAPLALAGAGFAGIAQWLGLVVFVAICVLFYRRVLAR" misc_feature complement(4410996..4413017) /locus_tag="PA3934" /note="Predicted oligopeptide transporter, OPT family [General function prediction only]; Region: OPT; COG1297" /db_xref="CDD:440908" protein_bind 4410994..4411006 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3934" /bound_moiety="AmrZ" protein_bind complement(4413076..4413117) /experiment="DNA-array expression analysis [PMID: 15175299]" /experiment="EMSA [PMID: 15175299]" /note="Transcription factor binding site for NP_249584.; Evidence of regulation for: PA3934" /bound_moiety="ArgR" gene complement(4413192..4414025) /gene="tauD" /locus_tag="PA3935" /db_xref="GeneID:878589" CDS complement(4413192..4414025) /gene="tauD" /locus_tag="PA3935" /EC_number="1.14.11.17" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="taurine dioxygenase" /protein_id="NP_252624.1" /db_xref="GeneID:878589" /translation="MSLTIQPISPALGAIVSGIDLGAPLDDTGQRAIEQALLEHQVLF FRDQSLEPRSQARFAARFGDLHIHPIYPSVPEQPEVIVLDTAVTDVRDNAIWHTDVTF LETPALGAVLAAKQLPPYGGDTLWASSTAAYEALSAPLRRLLDGLTATHDIGKSFPRE RFGVTEADLARLEEARLKNPPRSHPVVRTHPVTGRKGLFVSDGFTTRINELEPAESDA LLKFLFAHATRPEFTVRWRWQENDVAFWDNRVTQHYAVDDYRPQRRVMHRATILGDKP F" misc_feature complement(4413195..4414025) /gene="tauD" /locus_tag="PA3935" /note="taurine dioxygenase; Reviewed; Region: tauD; PRK09553" /db_xref="CDD:181947" gene complement(4414132..4414950) /locus_tag="PA3936" /db_xref="GeneID:877908" CDS complement(4414132..4414950) /locus_tag="PA3936" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="taurine ABC transporter permease" /protein_id="NP_252625.1" /db_xref="GeneID:877908" /translation="MPTDTLGLAVANPVPRKRRLPGDRRRWAAGASVLALALLWWAAT RFGWVDVLFLPAPEQLFEALQRLWQEGYLDASLLQHVGTSLLRVLLALGAAVLTAIPL GVLMGLNPLAGAALDPLVEFYRPIPPLAYLPLIVIWFGIGELSKVLLIYLALFAPLLI ATAAGVRRVDRSRVQAVRCLGASRWQVVRYVILPSALPEVLTGLRIALGVGWSTLVAA ELIAANRGLGFMVQSAAQFLATDVVVVGILLIAAIALAFELGLRWVQRRFAAWG" misc_feature complement(4414138..4414920) /locus_tag="PA3936" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2; cl00427" /db_xref="CDD:444901" misc_feature complement(order(4414297..4414314,4414543..4414587)) /locus_tag="PA3936" /note="conserved gate region [active]" /db_xref="CDD:119394" misc_feature complement(order(4414366..4414368,4414378..4414383, 4414399..4414437)) /locus_tag="PA3936" /note="ABC-ATPase subunit interface [active]" /db_xref="CDD:119394" gene complement(4414940..4415731) /locus_tag="PA3937" /db_xref="GeneID:877909" CDS complement(4414940..4415731) /locus_tag="PA3937" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="taurine ABC transporter ATP-binding protein" /protein_id="NP_252626.1" /db_xref="GeneID:877909" /translation="MSRLTAEAISLSFEQRGQRRAILRDLSLGLAKGESLVVLGPSGC GKSTLLNILAGFQKPDQGRVQIDGRTLEGPGGERGVVFQDDALMPWLNALDNVALGLR IRGLGKAERTARARQVLQLVGLQEYAEQSVAQLSGGQRQRLGLARALAVEPDFLLLDE PFGALDALTRERMQVLLLDLWKQTGKGLFLITHSVDEALFLATDLVVMDGPPARIVKR LPVDFARRYAAGETVRSIKADPEFGRLRQALLDEFLDVAEAEHAH" misc_feature complement(4414946..4415731) /locus_tag="PA3937" /note="ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]; Region: TauB; COG4525" /db_xref="CDD:443596" gene complement(4415796..4416809) /locus_tag="PA3938" /db_xref="GeneID:878806" CDS complement(4415796..4416809) /locus_tag="PA3938" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="taurine-binding protein" /protein_id="NP_252627.1" /db_xref="GeneID:878806" /translation="MKRPNSLHRLVAALAFASLSVAAQAADITVGYQTGIDPTKVPQA DGLYEKAIGEKIDWRRFNSGPEVIAALASGDLQLGNIGSSPLAAATSRKLPIVAFIVS AQINAAEALVVRNGSGIGKPEDLVGKTIATPFVSTSHYSLLGALKHWQIDPSKVKIVN LNPAEIAAAWRRGDIDGAFVWSPALGEIKKSGKVLTDAAEVGQWGAPTFEVWVARKDF AEKHPEIVARFARVSLDSFADYNAHKAEWTADSEPVKKIARLTGADPRDVPELLAGST FPESQAQLSADLLGGGTAKAIAGTAEFLKEQKRVPAVLGDYSPYVSADFVRQAEQVQV GQR" misc_feature complement(4415823..4416809) /locus_tag="PA3938" /note="ABC-type taurine transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: TauA; COG4521" /db_xref="CDD:443595" gene complement(4417014..4417934) /locus_tag="PA3939" /db_xref="GeneID:878807" CDS complement(4417014..4417934) /locus_tag="PA3939" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252628.1" /db_xref="GeneID:878807" /translation="MSEARLHSPDPRTPRPMAGWAASLRDSGLLALAVPRVFAGMERD WGEIFAGVRHLAEQELELARRLALHHLQIASIRLLGSPEQQRRLLPASVERRWLWSEA VDLRRAQPEAQEHWRGGFLVGGRGSDCFAVEDVDRLLISAWHAPSRAHLIAVAETGRA GIDISGLADGSGLFLPAGQRLHYQRLRLHPEDILVPPGLPPTPCGQLREGLTRLAQAN LDLGQAARVPGDVAGQGEAPRLLALALRLVELAAESFQAAFARGGALTFRESAAASLL ASEAEAVARAGLLACLRRQALEARLLGAAL" misc_feature complement(<4417239..4417871) /locus_tag="PA3939" /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933" /db_xref="CDD:447864" gene 4418303..4418584 /locus_tag="PA3940" /db_xref="GeneID:878829" CDS 4418303..4418584 /locus_tag="PA3940" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="DNA binding protein" /protein_id="NP_252629.1" /db_xref="GeneID:878829" /translation="MALTKDQLIQDIAEAIDAQKTTVRSALDQLAEIVKDALENDGEI TLPGIGKLKVSERPARTGRNPQTGKAIEIAAKRVAKFVPAKALTDAING" misc_feature 4418309..4418581 /locus_tag="PA3940" /note="Bacterial nucleoid DNA-binding protein IHF-alpha [Replication, recombination and repair]; Region: HimA; COG0776" /db_xref="CDD:440539" gene complement(4418708..4419304) /locus_tag="PA3941" /db_xref="GeneID:878830" CDS complement(4418708..4419304) /locus_tag="PA3941" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252630.1" /db_xref="GeneID:878830" /translation="MRLADIRHWVFDMDGTLTRAVHDFPAIRRALDIPEQDDILLHLA ALPEAEAAAKHAWLLEHERALAEAARPAPGALELVRELQRRGVRLGILTRNDHQLALI TLEAIGLGGCFPSEHILGRGEARPKPDPDGLLRIARRWNVTPAELVMVGDYRFDLDCG RAAGSRTVLVNLPENPWPELADWHAADCHALLEQLQTP" misc_feature complement(4418714..4419289) /locus_tag="PA3941" /note="Phosphoglycolate phosphatase, HAD superfamily [Energy production and conversion]; Region: Gph; COG0546" /db_xref="CDD:440312" gene complement(4419301..4420170) /gene="tesB" /locus_tag="PA3942" /db_xref="GeneID:878836" CDS complement(4419301..4420170) /gene="tesB" /locus_tag="PA3942" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="acyl-CoA thioesterase II" /protein_id="NP_252631.1" /db_xref="GeneID:878836" /translation="MTQILDNLVALLSLEPIEENLFRGMSQDLGFRQLYGGQVLGQAL SAASQTVEDDRHVHSMHGYFLRPGDASMPVVYQVDRVRDGGSFSTRRVTAIQKGQPIF TLSSSFQYDEEGFHHQIEMPEVVGPDNLPSELELTRQRAERIPERIRDKLLYPKPIEI RPVTQHDPYDPQPDEPVKYLWFRADGKLPDVPALHKYLLAYASDFGFLTTSMQPHAVS VWQKTMQVASLDHALWFHRDLRADEWLLYAIDSPWAGNARGFVRGSIFNQSGQLVASS SQEGLIRKREDWA" misc_feature complement(4419313..4420170) /gene="tesB" /locus_tag="PA3942" /note="acyl-CoA thioesterase II; Provisional; Region: PRK10526" /db_xref="CDD:182519" gene complement(4420204..4421799) /locus_tag="PA3943" /db_xref="GeneID:878837" CDS complement(4420204..4421799) /locus_tag="PA3943" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252632.1" /db_xref="GeneID:878837" /translation="MGDGGGEVLSYHRLSMHRPERYAPGPGGLDWATQPAPFRQYRGC RQIELLHRPLEESPPYDGVFSGPAAAPSRLDRRSLSQMLYDGLALSAWKEAGGTRWAL RVNPSSGNLHPTEAYLLLPGGTLEPAPLLAHYRPDKHALEVRGELPATLASLLDDCLP PGGCLLALTSVPWREAWKYGERAYRYCQHDLGHALACLSIAAAIQGWEMRLLRGVAES ALDGLFGLDRDGFAECESVDALFWIGPALTQEPSLSPRLCEGLAALPLAGAPNRLSRE YRDWPELQRIHGLCRAPRLPARPWRVAPGEPGNDNPGLPLRPLLHRRRSAQRMDGRAG IDVELLRAWLRRLLPERSPVPFAVTGEAARVDLLLFVHRVRGLVPGLYWLDRSGLRRP PMREDFLWQHVDPELPLYLLQEGDARALSAYLSCQQDIAGDGCVALAMLAHLGAALEE GPWCYPRLYWECGQLGQLLYLEAEAAGLSGTGIGCYYDPLVHELLGLTDESMASLYHF TLGRAVWDTRLCNMPAYPALRRD" misc_feature complement(4421107..4421580) /locus_tag="PA3943" /note="oxidase similar to the microcin B17 processing protein McbC; Region: McbC_SagB-like_oxidoreductase; cd02142" /db_xref="CDD:380318" misc_feature complement(order(4421161..4421172,4421203..4421205, 4421215..4421217,4421230..4421235,4421242..4421244, 4421470..4421472,4421476..4421484)) /locus_tag="PA3943" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:380318" misc_feature complement(4420264..4420890) /locus_tag="PA3943" /note="oxidase similar to the microcin B17 processing protein McbC; Region: McbC_SagB-like_oxidoreductase; cd02142" /db_xref="CDD:380318" misc_feature complement(order(4420348..4420359,4420390..4420392, 4420402..4420404,4420417..4420422,4420429..4420431, 4420717..4420719,4420723..4420731,4420885..4420887)) /locus_tag="PA3943" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:380318" misc_feature complement(order(4420279..4420293,4420336..4420344, 4420348..4420350,4420384..4420392,4420396..4420404, 4420408..4420413,4420420..4420425,4420432..4420437, 4420456..4420458,4420465..4420470,4420729..4420737, 4420819..4420821,4420828..4420830)) /locus_tag="PA3943" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:380318" gene complement(4421802..4422380) /locus_tag="PA3944" /db_xref="GeneID:878785" CDS complement(4421802..4422380) /locus_tag="PA3944" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252633.1" /db_xref="GeneID:878785" /translation="MNANLPPSAISELHGPRLLLRAWRDSDREAFAEMCADPQVMEFF PSVLDRAQSDALVDRVQAHFAERGYGPWALELPGEAAFIGFTGLFDVTMDVHFAPTVE IGWRLAPAYWGRGLAREAAETALDFAFERLRLPEVVAFTTPPNRRSWGLMERLGMRRD PAEDFDHPLLAADHPMRRHILYRVDAARWAER" misc_feature complement(4421817..4422347) /locus_tag="PA3944" /note="Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: RimL; COG1670" /db_xref="CDD:441276" gene complement(4422407..4422997) /locus_tag="PA3945" /db_xref="GeneID:878786" CDS complement(4422407..4422997) /locus_tag="PA3945" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252634.1" /db_xref="GeneID:878786" /translation="MADLTSLSIEHLRSPRLYTHRLILRPWLVQDRARFAELNADPLV MEFFPSCLDRAQSDALLRRIDAHFAEHGFGWWALQVKGGDPFIGYVGLEVVDFDAPFV PAVAIGWRLAAEHWAEGFAHEAAEAALSYAFDTLGLDQVVAFTVPANENSLGLMERLG MHRDPTDDFEHPDLPPGHRLRHHVLYRLTREDWLRR" misc_feature complement(4422422..4422955) /locus_tag="PA3945" /note="Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: RimL; COG1670" /db_xref="CDD:441276" gene complement(4423212..4426850) /gene="rocS1" /locus_tag="PA3946" /db_xref="GeneID:878870" CDS complement(4423212..4426850) /gene="rocS1" /locus_tag="PA3946" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_252635.1" /db_xref="GeneID:878870" /translation="MRSKLFLLFFCLLLSGGRLFAVEAHPSLTLFSQLRIEHEDMAIA EDDWAWLRHKGHLRLGAALDETSPFNVRLDDENYEGITADVATLVGQLLGMRIKVVSF DTHADAVAALAAGKIDLLGSHYSSAGDSSLVLSQPYARDRLAVFKRMGEKRNSPEDLA GLSVAVAREHVGELRQRFPRARFVVFGSHDEAVAAVAFGHTDLYLDDVLSAYHRINRS YYGYVRFERFADARLEGGYGFLLRRGDTNLLRVVNSAIGAINQDRLESIARRWVGSGS LPTGQRIALTPQESRWIARHPVVRLVINDDLAPLAFFNSDETFSGIASDLLDMISRRT GLHFQVTPRSGGFPEQIGVLARKEADLAIMSRSSKREEMLRFTRSFLSTSYVLVTRAD DKGRAEIPGSLDGKRIAIPAGHVGMQQVRERYPQASMVEVGVALDAMNLVYEGRADAA VVPLVTARYYIVRLFRERLAIADLVPIGAATAHFAVRRGDAELQSILDKALLSISPDD LSDIVNRWRSPPGMSGQTWVDYILVITEILAIAAALLLLCLGWVTYQRRQIRVRARVE QALSDQLRFVEALTDCMPPPLYVRDVNGRMLSCNRSYLQSVGLSSEEVMNRTVLELPM ENFETAPEFHRSYLMAMREGRTIEAVYPVALGGRERWIDHWIQPFRDSSGTIRGVICG WLDITEHRQLIDELEEAKNLADEASRAKTTFLATMSHEIRTPMNAVIGILELALKRAE TGRVDRSSIEIAYASAKSLLELIGDILDIARIESGRLSLSPKRANLRELVESVARVFE GLARQKRLSLVLEIDSSINGDVLLDAMRFKQILSNLVSNAIKFTDEGSIRIRIDGRQV EPSLLQVNLCVEDTGIGISLGDQQQLFRPFAQVNRNLQNTEGTGLGLVISRSLCEMMG GRLVMSSELGQGTRIDVELRLQVLEPIVENVRAIPLGSRQARRLQVLVVDDHAVNRQI LHQQLSFLGHDVEEAENGLSALNLWHGQPFDMVITDCHMPLMSGSDLARSIRQEEREN GEEPVVIIGLTADAQPEEIERCIQAGMNECLIKPIGLDVLEERLLALGFAADELPVTI DAEPVAIPTAPRLYDLDSLHALTGGEPTMLRRLLDELLTSNRKDLETLEGLVQRQETG ELAELAHRIKGAARVVRGEQLVESCRRLEDACLSPNASFAWVEECAVGVKLAILALDE SLVEECTD" misc_feature complement(4423221..4426757) /gene="rocS1" /locus_tag="PA3946" /note="acid-sensing system histidine kinase EvgS; Region: PRK09959" /db_xref="CDD:182169" gene complement(4426952..4428130) /gene="rocR" /locus_tag="PA3947" /db_xref="GeneID:878871" CDS complement(4426952..4428130) /gene="rocR" /locus_tag="PA3947" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator RocR" /protein_id="NP_252636.1" /db_xref="GeneID:878871" /translation="MNDLNVLVLEDEPFQRLVAVTALKKVVPGSILEAADGKEAVAIL ESCGHVDIAICDLQMSGMDGLAFLRHASLSGKVHSVILSSEVDPILRQATISMIECLG LNFLGDLGKPFSLERITALLTRYNARRQDLPRQIEVAELPSVADVVRGLDNGEFEAYY QPKVALDGGGLIGAEVLARWNHPHLGVLPPSHFLYVMETYNLVDKLFWQLFSQGLATR RKLAQLGQPINLAFNVHPSQLGSRALAENISALLTEFHLPPSSVMFEITETGLISAPA SSLENLVRLRIMGCGLAMDDFGAGYSSLDRLCEFPFSQIKLDRTFVQKMKTQPRSCAV ISSVVALAQALGISLVVEGVESDEQRVRLIELGCSIAQGYLFARPMPEQHFLDYCSGS " misc_feature complement(4427750..4428121) /gene="rocR" /locus_tag="PA3947" /note="phosphoacceptor receiver (REC) domain of response regulator RocR; Region: REC_RocR; cd17530" /db_xref="CDD:381086" misc_feature complement(order(4427750..4427752,4427759..4427764, 4427768..4427776,4427780..4427788,4427795..4427797, 4427807..4427812,4427855..4427857,4427861..4427872, 4427876..4427878,4427951..4427953,4427957..4427959, 4428014..4428016,4428032..4428034,4428056..4428061, 4428077..4428082,4428086..4428088,4428092..4428100)) /gene="rocR" /locus_tag="PA3947" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:381086" misc_feature complement(4426979..4427698) /gene="rocR" /locus_tag="PA3947" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:238923" gene 4428412..4429041 /gene="rocA1" /locus_tag="PA3948" /db_xref="GeneID:878843" CDS 4428412..4429041 /gene="rocA1" /locus_tag="PA3948" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="two-component response regulator RocA1" /protein_id="NP_252637.1" /db_xref="GeneID:878843" /translation="MHTVLIVDDHPVIRLAVRVLLEKHGLQVVAETDNGVDAIQLVRE HEPDVVILDIGIPKLDGLTVISRIKSLGLRSQVLVLTSQSAEAFCKRCIQVGARGFVN KEEDLNNLINALNAVTAGYTFFPSLTFDTLGTPPERISESELIGLLSDREMIVLQHLA MGYSNKAIGEKLFLSNKTVSTYKTRLLQKLGLGSLVDLAEFAKRNSLIH" misc_feature 4428418..4429032 /gene="rocA1" /locus_tag="PA3948" /note="acid-sensing system DNA-binding response regulator EvgA; Region: PRK09958" /db_xref="CDD:182168" gene 4429401..4430576 /locus_tag="PA3949" /db_xref="GeneID:878844" CDS 4429401..4430576 /locus_tag="PA3949" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252638.1" /db_xref="GeneID:878844" /translation="MAAEVLSQAGVRTEVFDAMPSVGRKFLLAGVGGMNITHAEAREQ FLGRYGRRQKEIAALLGEFDADALRAWIHGLGIDTFVGSSGRVFPSDMKAAPLLRAWL KRLREQGVLIHTRCRWLGWNADGTLDIQSAAERLSIRADAVILALGGGSWQRLGSDGA WVPLLRARGIEVEPLRPSNCGFEIDGWSELFRDKFSGAPVKPVAMGLAGETPRQGEFV VTRDGIEGSLVYALSAAIRERIEARGSAEVWLDLLPNRRREQIEAALARPRGSRSMAN HLRSQLGIDGVRAGLLRELTPAATYTEPARLAAAIKRLPLTLLRPRPLDEAISSAGGV RFEALDRNLMLDGLPGVFCAGEMLDWEAPTGGYLLTACFASGRVAGLGALAWLRGRR" misc_feature 4429428..4430561 /locus_tag="PA3949" /note="A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous...; Region: Rossmann-fold NAD(P)(+)-binding proteins; cl21454" /db_xref="CDD:473865" gene complement(4430599..4431948) /locus_tag="PA3950" /db_xref="GeneID:878847" CDS complement(4430599..4431948) /locus_tag="PA3950" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase" /protein_id="NP_252639.1" /db_xref="GeneID:878847" /translation="MTFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAA AQTGTGKTAGFALPLLQRLTLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLP LRTAVAYGGVSINPQMMKLRKGVDILVATPGRLLDLYRQNAVKFAQLQALVLDEADRM LDLGFARELDELFAALPRKRQTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKS VRQWLVPVDKKRKAELFCHLLQANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHG DKPQPARLRALQRFKAGEVDLLVATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGR TGRAGASGQAVSLVCADEVELLAAIETLIGQTLQRREEPDFEPEHRVPQTAPGGVVLK KPKKPKKPKAAESVGKPGKIHLGSWFDSSAPTVKAVRKAPGFGAGAAGKPKKRPSGK" misc_feature complement(4430803..4431948) /locus_tag="PA3950" /note="Superfamily II DNA and RNA helicase [Replication, recombination and repair]; Region: SrmB; COG0513" /db_xref="CDD:440279" gene complement(4432026..4432529) /locus_tag="PA3951" /db_xref="GeneID:878848" CDS complement(4432026..4432529) /locus_tag="PA3951" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252640.1" /db_xref="GeneID:878848" /translation="MSRPESPAAKKIAVFADVQNLYYTVRQAYGCHLNYAALWADIAR GGSIVEAYAYAIDRGDPRQQQFQQILRNLGFTVKLKPYIQRADGSAKGDWDVGITIDV LDAAPRVDEVVLLSGDGDFDLLLEKVIRAHGVVATAYGVPGLTANALIRAASRYVPIE GGLLLKG" misc_feature complement(4432050..4432502) /locus_tag="PA3951" /note="PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins; Region: PIN_LabA; cd10911" /db_xref="CDD:350235" protein_bind 4432550..4432562 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA3951" /bound_moiety="AmrZ" gene complement(4432595..4433311) /locus_tag="PA3952" /db_xref="GeneID:878855" CDS complement(4432595..4433311) /locus_tag="PA3952" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252641.2" /db_xref="GeneID:878855" /translation="MKSDEKTLIDGLFSRLREAEGQSAPRDAEAEAQINQHLVRQPAA PYYMAQVVLIQEAALKRLDQRVKELEAQVAQLQQSRPSSGGFLSGLFGGGARDEPAPS QSGRPAGWGETRFSNPAAAAGDMRPGMAPAAAAAPSRASGFLGGALQTAAGVAGGMLV ADLLTGMFRHSQPQEIVEVIQDVPVDNLDASQFADPEPATERFADSDYPADGGFADGD FSDSDFNDDSSFLGDDDLFT" misc_feature complement(4432601..4433311) /locus_tag="PA3952" /note="Uncharacterized conserved protein, DUF2076 domain [Function unknown]; Region: COG3416" /db_xref="CDD:442642" gene 4433411..4433992 /locus_tag="PA3953" /db_xref="GeneID:878856" CDS 4433411..4433992 /locus_tag="PA3953" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252642.1" /db_xref="GeneID:878856" /translation="MNDDAQRSARSQVALLIVDLQRGMQRHDLPPRNNPGAEARIVEL LAAWRAAGWPVVHVRHVSRQPGSPFAPGQPGVEFQPALAPRDDEAVFEKNVPDAFINS GLQRWLHVRDIRQVALVGVATENSVEASARSAGNLGFQTWVVADACFTFAKPDFHGTP RSADEVHAMALANLHGEYAVVLRAAELLQRLPA" misc_feature 4433450..4433920 /locus_tag="PA3953" /note="Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia; Region: nicotinamidase_related; cd01014" /db_xref="CDD:238496" misc_feature order(4433465..4433467,4433687..4433689,4433786..4433788) /locus_tag="PA3953" /note="catalytic triad [active]" /db_xref="CDD:238496" misc_feature 4433771..4433776 /locus_tag="PA3953" /note="conserved cis-peptide bond [active]" /db_xref="CDD:238496" gene 4434150..4435244 /locus_tag="PA3954" /db_xref="GeneID:878845" CDS 4434150..4435244 /locus_tag="PA3954" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252643.1" /db_xref="GeneID:878845" /translation="MSQEQQPIRFAYWVPNVSGGLVVSKIEQRTSWDIDYNRKLAQLA ERNGFDYALSQIRFTAGYGAEYQHESVAISHALLAATEKLKVIAAILPGPWHPAVVAK QLATIDQLTNGRVAVNIVSGWFKGEFTGIGEPWLEHDERYRRSEEFIRVLKGIWTEEN FTFKGDFYRFHDYTLKPKPIQQPHPEIFQGGSSRAARDMASRVSDWYFTNGNSIDGIR AQVEDIRAKAAANGHSVKVGVNAFIIARDTEEEARAVLDEIIAKADYEAVNAFGDAVK QAGKASPEGDGNWAKSTFEDLVQYNDGFKTNLIGTPRQIAERIVALKAAGVDLVLSAF LHFHEEVEYFGKHVLPLVRELEQAQAREAA" misc_feature 4434171..4435217 /locus_tag="PA3954" /note="dimethyl sulfone monooxygenase SfnG; Region: LLM_DMSO2_sfnG; TIGR04021" /db_xref="CDD:274923" misc_feature order(4434186..4434188,4434198..4434200,4434348..4434350, 4434507..4434509,4434570..4434572,4434726..4434731, 4434771..4434773,4434867..4434869,4434873..4434875) /locus_tag="PA3954" /note="active site" /db_xref="CDD:238527" misc_feature order(4434339..4434356,4434363..4434365,4434372..4434377, 4434384..4434386,4434435..4434437,4434441..4434446, 4434453..4434458,4434465..4434467,4434474..4434476, 4434525..4434527,4434534..4434539,4434654..4434656, 4434660..4434671,4434675..4434680) /locus_tag="PA3954" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238527" misc_feature 4434414..4434419 /locus_tag="PA3954" /note="non-prolyl cis peptide bond [active]" /db_xref="CDD:238527" misc_feature order(4434513..4434539,4434561..4434569,4434654..4434695, 4434876..4434887,4434906..4434923) /locus_tag="PA3954" /note="insertion regions; other site" /db_xref="CDD:238527" gene 4435328..4435984 /locus_tag="PA3955" /db_xref="GeneID:878846" CDS 4435328..4435984 /locus_tag="PA3955" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252644.1" /db_xref="GeneID:878846" /translation="MNPLLPLRDAWFFFTRHLTTLVPLCLPWIFLESLLQQQIDEAVG PQQMGAWSLVAGLLFYPLYTAALILFMDARGRDERPRVGQLWSAALRLWPAFALLAAL TSLLIVLGLSLLILPGIFVMVKLSFAEFCLVLRGRSPLQALRESFEFTRGRFFLILAC SLVILLPVWSLEAWLADSAGDAVVLRVALHALSGFFQLLLTIVAFRIYSLGPAPRNGM " gene 4436051..4436485 /locus_tag="PA3956" /db_xref="GeneID:878858" CDS 4436051..4436485 /locus_tag="PA3956" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252645.1" /db_xref="GeneID:878858" /translation="MSDESANPSCISHLSIGTNDFPRARAFYDAVMAALGCKVILEYP GAVAYGKLYPEFWVQAPIDGRPASVGNGSHVGFFADSKAQVDAFHAAALAAGARDEGA PGPRPLYGEPYYGCFIRDLDGHKVEASYWDMSQGFDAHDHAH" misc_feature 4436081..4436440 /locus_tag="PA3956" /note="uncharacterized subfamily of vicinal oxygen chelate (VOC) family; Region: VOC_like; cd07262" /db_xref="CDD:319923" gene complement(4436492..4437328) /locus_tag="PA3957" /db_xref="GeneID:878859" CDS complement(4436492..4437328) /locus_tag="PA3957" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_252646.1" /db_xref="GeneID:878859" /translation="MPRKVFSSQAYRHKVVLVSGGCSGIGRALALRFARAGARLAILD LDQAALDSLVQHLRDHLGGEALGLRCDVADADAVERAVALAVERFGGIDVLVNNAGIT HRGTFAETGLGVFRKVMAVNFFGAVHCTRAALPSLLERRGQIVVLGSLTGFAPLLYRS AYNASKHALHGLFDTLRMELEGTGVSVTLACPGFTATDLRKNALVGDGSVTRQPVQVL GSQVASPVEVAEAIFQGAARRRRLLVLSNVNWRARLLARFFPRLFEKLLVPRLSGLKP QP" misc_feature complement(4436501..4437292) /locus_tag="PA3957" /note="SDR family oxidoreductase; Region: PRK06181" /db_xref="CDD:235726" gene 4437390..4438529 /locus_tag="PA3958" /db_xref="GeneID:878866" CDS 4437390..4438529 /locus_tag="PA3958" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252647.1" /db_xref="GeneID:878866" /translation="MRGGKLYALVLSSIVSIAMSLPRLRNLLFVGLLLLVGGALLASY LLSWQPADREAAPLHCQGAAPALKPGQALKVMTWNIQYLAGKRYVFWDDLPDATGPDQ RPTAEDLAFTLDEVVRVIRDEQPDLVLLQEIDDGSSATDDQDQLALIQERINDLYHCS AQAYEWKSAFVPTPHIFGSVGRKQATLSRYRIDSAERRQLPPRDGGLFDRLFGPRPAI LVSHLPIDGGGELAVLNARFDRPQANDDTLERQVETTRTLLDELQARRTPWLLGGDLN LLPPGQYPYLLAPLRAPYREDSELAILSGRFPMVPSLEEASGVDQVRWYTHFPNDPRV QGPDRTLDYLFHSPSLTRLDARVRRSDTLQISNHLPLAARFLLPH" misc_feature 4437591..4438523 /locus_tag="PA3958" /note="Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family [General function prediction only]; Region: ElsH; COG3568" /db_xref="CDD:442789" gene 4438619..4439353 /locus_tag="PA3959" /db_xref="GeneID:878867" CDS 4438619..4439353 /locus_tag="PA3959" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252648.1" /db_xref="GeneID:878867" /translation="MPLRTTTPLLALLAFALLAAPQLHAQDARPSLNVGYYEFPPYIY TARDGHAAGSGARLVRLLLERAGYRPAFRALPSARLYLGLQDGSVALWAGAAKPELAA DTLQARRVLGHVSLNLYYPAHQPAPRVPQDLAGRRLILISGYSYWKPVTNFIQDPNLH LRLYRTGTHHAALRMLELGRGDYLLDYQAPVEAASRQALASQELYRLPLRMIVSRHIP GAEALRDRLDQAYDQLRSDGADLSLL" misc_feature 4438712..4439332 /locus_tag="PA3959" /note="ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:440596" gene 4439377..4439784 /locus_tag="PA3960" /db_xref="GeneID:878874" CDS 4439377..4439784 /locus_tag="PA3960" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252649.1" /db_xref="GeneID:878874" /translation="MHTAIPCCTINGEQPALRGQVCQSLLIQEWWWEGRPADPVNVVY LQFEQRWYRLYFEGETVFWRSGEAPRPCENDEGPGEYRLHDLGRQRGLVGVRLLALEF VLNGPTLDSHFDFADGQRLSFRHFLDDDLTRVL" gene complement(4439795..4442311) /locus_tag="PA3961" /db_xref="GeneID:878875" CDS complement(4439795..4442311) /locus_tag="PA3961" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ATP-dependent helicase" /protein_id="NP_252650.1" /db_xref="GeneID:878875" /translation="MISLPIDAVVPALRQALGAQHQAVLEAPPGAGKTTRVPLALLDE PWLAGQRILMLEPRRLAARAAAERLAAELGEKVGETVGYRIRLESRVGPKTRIEVVTE GILARRLQDDPALDGVGLVIFDEFHERSLDADLALALTLNGRELLRDEPPLKVLVMSA TLEGERLAALLGEAPVVRSEGRMFPVDIRWGRPAQPGEFIEPRVQQAVLQALAEESGS VLVFLPGQAEIRRVHEGLREALGGRPEVLLCPLHGELDLAAQRAAIEPASRGTRKVVL ATNIAETSLTIDGVRVVIDAGLARVPRFDPGSGMTRLETQRISRASATQRAGRAGRLE PGVCYRLWSESQHEQLPAYGTAEILQADLAGLALQLARWGVAPEELAWLDAPPAAAYA QARELLGRLGALNASGALSAHGQAMAELPTHPRIAHLLLRGQALGLGELACDVAALLG ERDIQRGGGADLHSRLALLAGEARTGASRGAVQRARQLARQFRGYLRGAASEAVVDPG HPRWLGCLLAFAYPDRIARQRRAGGGDYRLANGRAAQFGEPDSLMKQPWLVIADLGSR QGQREERIYLAAELDPRLFDTVLAEQVSQRDELQWDEREGVLRAERQRRVGELVLSSE ALPGLDEAARSQALLGLVRRKGLELLPWTPELRQWQARIGLLRRLDLEDKGESEWPDV SDAALLERLEEWLPAYLGKVTRLAHFANLDLASILAGLLPWPLPQRLDEWAPKTLEVP SGSRIRLDYSETPPILAVRLQELFGLGDTPRIAQGRLAVKLHLLSPAHRPVQVTQDLA NFWRSTYAEVRKDLKGRYPKHYWPDDPLVAEATARAKPRK" misc_feature complement(4439798..4442311) /locus_tag="PA3961" /note="HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]; Region: HrpA; COG1643" /db_xref="CDD:441249" gene 4442453..4442869 /locus_tag="PA3962" /db_xref="GeneID:878834" CDS 4442453..4442869 /locus_tag="PA3962" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252651.1" /db_xref="GeneID:878834" /translation="MRLATRVSCAVLSAALLSQLSACGTLFYPERRGQIDGRIDPAIV AFDAIGLLFYIIPGLIAFGVDFATGAIYLPDAKYSVAPEVLKDAVGADGKVDNRKLKA ILEREIGRELPLDDPRLIRHSGSVEQLAAYGLKPAA" gene 4442958..4443854 /locus_tag="PA3963" /db_xref="GeneID:878835" CDS 4442958..4443854 /locus_tag="PA3963" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_252652.1" /db_xref="GeneID:878835" /translation="MSPDSPHARLLRLATLASLGVAVTLVIGKAIAWWLSGSVSLLAG LTDSLLDSAASLLNLLAVHYSLRPADDDHRYGHGKAEALAGLAQAMFIGASAVLVAIQ AVEQLRDPQPLGAATWGIAVMLLSLLLTALLLAFQTHVIRRTGSTAIRADSLHYRSDL LLNASILVALLLARYGWPQSDGLFGLGIALYILWSALQIARESVSILMDRELPTDISE RMRELACSVPGVLGAHDVRTRISGNHWFVQLHLELPGELSLSVAHALTDRAVLAIKRE YPKAEVLIHADPQEVVGKETVS" misc_feature 4442976..4443842 /locus_tag="PA3963" /note="CDF family cation-efflux pump FieF; Region: fieF; PRK09509" /db_xref="CDD:181919" gene complement(4443847..4444530) /locus_tag="PA3963a" /db_xref="GeneID:17373378" CDS complement(4443847..4444530) /locus_tag="PA3963a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719772.1" /db_xref="GeneID:17373378" /translation="MLGVGALSLSLCVQAQADDGRGGRGGAGGERGVAHGQPGPGRGE AHGGSWGPHPDWRPGRVVEALPRGHLRVPYRGGEYFFDDGYWYRPDGPRYVLVVPPRG VRVRSLPPYAEQVWLGSVLYFLAAGTYYLWHADTREYEVVSPPPRAAGPVYPVSGPAA SYDVVAYPARGQGPDQQGRDRYECHRWAVGESGFDPAGATYAPAAEVANGYRRAMAAC LSGRGYSVN" misc_feature complement(<4444096..>4444383) /locus_tag="PA3963a" /note="Family of unknown function (DUF6515); Region: DUF6515; pfam20125" /db_xref="CDD:466293" gene 4444978..4445487 /locus_tag="PA3965" /db_xref="GeneID:878888" CDS 4444978..4445487 /locus_tag="PA3965" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252654.1" /db_xref="GeneID:878888" /translation="MAINLKEILAMNKLDRYDLRILEELQRDARISNQELAERIGLSP SPCSRRVKQLEDDGYIVRQVALLDRKKLGLSLTAFVLIGMDRHTPERFEHFQEVIGKC PEVLECSLVTGMDADYQLKVVVPDMDHYQKLLLGTLTRIEGVSSVRSSFVLNQVLAST ELPLEHLRD" misc_feature 4445014..4445436 /locus_tag="PA3965" /note="DNA-binding transcriptional regulator, Lrp family [Transcription]; Region: Lrp; COG1522" /db_xref="CDD:441131" gene 4445689..4445898 /locus_tag="PA3966" /db_xref="GeneID:878878" CDS 4445689..4445898 /locus_tag="PA3966" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252655.1" /db_xref="GeneID:878878" /translation="MDPELFEEWMMTGLVTVLILFMAFIVWDLAKKSKAGKFGTLILF FALGLGVLGFIIKGLVIGSLEGAGM" misc_feature 4445728..4445868 /locus_tag="PA3966" /note="Protein of unknown function (DUF2788); Region: DUF2788; pfam10981" /db_xref="CDD:431576" gene 4445999..4446391 /locus_tag="PA3967" /db_xref="GeneID:878879" CDS 4445999..4446391 /locus_tag="PA3967" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252656.1" /db_xref="GeneID:878879" /translation="MNAADRVMQSYGRCCASTGFFDDFYRHFLASSPQIRAKFATTDM TAQKHLLRAGIMNLVMYARGMSDSKLRALGASHSRAALDIRPELYDLWLDALLMAVAE HDRDCDAETRDAWRDVMGRGIAVIKSYY" misc_feature 4446017..4446376 /locus_tag="PA3967" /note="myoglobin-like; M family globin domain; Region: Mb-like; cd01040" /db_xref="CDD:381254" misc_feature order(4446110..4446115,4446137..4446139,4446146..4446151, 4446158..4446160,4446215..4446217,4446224..4446229, 4446248..4446250,4446260..4446265,4446272..4446274) /locus_tag="PA3967" /note="heme binding site [chemical binding]; other site" /db_xref="CDD:381254" gene complement(4446425..4446994) /locus_tag="PA3968" /db_xref="GeneID:878864" CDS complement(4446425..4446994) /locus_tag="PA3968" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="pseudouridine synthase" /protein_id="NP_252657.1" /db_xref="GeneID:878864" /translation="MAKAPPSEPKLLLFNKPFDVLTQFNDEQGRSTLKDFIPVPGVYP AGRLDRDSEGLLLLTNDGRLQARIADPRHKLPKTYWVQVEGTPDEEQLRRLREGVTLN DGPTLPAEARLLDEPTLWERVPPVRFRKSVPTHWLELVIREGRNRQVRRMTAAVGLPT LRLVRVRIGPWSLDGLGLGEWREVPARLD" misc_feature complement(4446467..4446964) /locus_tag="PA3968" /note="Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi); Region: PseudoU_synth; cl00130" /db_xref="CDD:469624" misc_feature complement(order(4446545..4446547,4446848..4446859)) /locus_tag="PA3968" /note="active site" /db_xref="CDD:211324" gene 4447133..4448218 /locus_tag="PA3969" /db_xref="GeneID:878865" CDS 4447133..4448218 /locus_tag="PA3969" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252658.1" /db_xref="GeneID:878865" /translation="MPSLRPTWLISLLTLAGCAGSAYQGPPSDHFDGERFRNIQPTAH KSLRDLLKWQWNRPPQRPWVALPPTATPPRVNERARGEELRVTYINHATLLIQHRGLN ILTDPVWSQRVSPLAFIGPKRHHPPGLTLDQLPPIDLVLVSHNHYDHLDLETLRQLHR RWPTAKVVSGLGNAGLIRQTGFADVVEIDWWQAVPLGAGLTLHGVPVQHWSSRTRSDT NRTLWLGFVIDSPDGPLLFPGDTGLGPEFGLINQRFGAMRFAALPIGAYEPRWFMRDH HMNPDDAVQAHRTLQAQTSMAIHFGTFNLTDEQQDDPPKALQAALRSQGVDPATFGTP KPGEQWRVAPRNVAQEAEATRREQQLR" misc_feature 4447394..4447948 /locus_tag="PA3969" /note="mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain; Region: metallo-hydrolase-like_MBL-fold; cl23716" /db_xref="CDD:451500" misc_feature order(4447562..4447564,4447568..4447570,4447574..4447579, 4447787..4447792,4447850..4447852,4447946..4447948) /locus_tag="PA3969" /note="active site" /db_xref="CDD:293792" gene complement(4448176..4448742) /locus_tag="PA3969a" /db_xref="GeneID:17373379" CDS complement(4448176..4448742) /locus_tag="PA3969a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719773.1" /db_xref="GeneID:17373379" /translation="MPFSVPTHLSNPLRRFARRLVPDAAPEVAAPLPMPESLAGEPWF SVGRAVEALGGERVDGWILEEWRGLALRARFSACWRDPRGNLWNVLPQAGAIAFLADP QRRYEGVPLADQYQALSRDVLLEDYLGLRRQLARAGLDDEARERLAGMAARLESWLAL GGRGDQACPCGSGKRYRNCCSRLVASAS" misc_feature complement(4448203..>4448259) /locus_tag="PA3969a" /note="hypothetical protein; Provisional; Region: PRK05590" /db_xref="CDD:235521" gene complement(4448893..4450392) /gene="amn" /locus_tag="PA3970" /db_xref="GeneID:878880" CDS complement(4448893..4450392) /gene="amn" /locus_tag="PA3970" /EC_number="3.2.2.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="AMP nucleosidase" /protein_id="NP_252659.1" /db_xref="GeneID:878880" /translation="MRTDRKPTMSIDSDDGFVVARTAEEAVDRLAELHRQATAALSQA LKRYIKERIEPSEAERQNFHYPQLRIGYRCQGEVPSTTRAYAKVQVPGEYSVTVTHPD AFRKYLLEQLRPLMDDFTVQVQVGPSQQDIPYPYVVEQGDELAGSGVTAAELARVFPS TDLSAASDDIADGLYEWERADQLPLALFDAARVDFSLRRLVHYTGSDWRHVQPWILLT NYHRYVDQFIRLGLTRLREDPRFVRMVLPGNVIIERGMDEGEANAIVAGVVWHRYQMP AYHLIAADGDGITLVNIGVGPSNAKNITDHLAVLRPHCWLMIGHCGGLRQSQTIGDYV LAHAYMRRDGILDRALPPHIPIPALAEVQVALQEAAAEVTGERGESLKRRLRTGTVLT YDDRNWELRWAQERPLINLARAIAVDMESGTIAAQGYRLRVPYGTLLCVSDKPLHSEI KLPGSANAFYERAVNQHLRIGIAALDLLRSQLNSLHSRKLRSFDEPPFR" misc_feature complement(4448896..4450344) /gene="amn" /locus_tag="PA3970" /note="AMP nucleosidase; Provisional; Region: PRK08292" /db_xref="CDD:236222" gene complement(4450447..4450878) /locus_tag="PA3971" /db_xref="GeneID:878881" CDS complement(4450447..4450878) /locus_tag="PA3971" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252660.1" /db_xref="GeneID:878881" /translation="MQAHPRYRELVEQGFAAASFVGDLGIRPLDCGPGWVEAGLDILP RHAQQNGFIHAGVQATLADHAAGAAAATLVEEGQTVLTLEFKLNLLRPALCQRLLCRA EVLKAGRQVTVVEAEVFAERDGRRHLFSKATVTMAVVALAE" misc_feature complement(4450462..4450854) /locus_tag="PA3971" /note="Acyl-CoA thioesterase PaaI, contains HGG motif [Secondary metabolites biosynthesis, transport and catabolism]; Region: PaaI; COG2050" /db_xref="CDD:441653" gene complement(4450890..4452539) /locus_tag="PA3972" /db_xref="GeneID:878594" CDS complement(4450890..4452539) /locus_tag="PA3972" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_252661.1" /db_xref="GeneID:878594" /translation="MNLHQYAETHEVTNQVPSLDGANLYRLDLPLQEWVRRYQGGWAE ERLQRYGELAGGPLMAAGFLANQHKPEFHSHDRYGNRVDLVEFHPAYHELMRAAIEHE LPSLPWTDPRPGAQVARAGLSYLHSQAEAGTGCPLTMTYASVPAIRLQADLAEKWLPK ILSREYDPRNVPMEQKAGVTIGMAMTEKQGGTDVRANTTRAYPVGIPGPGQAYELVGH KWFCSAPMCDAFLTLAYTDKGLTCFLLPRHRPDGSRNQFYIQRLKDKLGNWSNASSEI EYRGALAWMVGEEGRGVPTIIEMVAMTRFDCMIGSSALMRQALTQAAHHCAYRKVGGR VLAEQPLMQNVLADLALESEAALALTLRMGHALDRAHDEQEEKFARLVTAVGKYWICK RAPAMINEASECMGGAGYVEETILPRLYREAPVNSIWEGSGNVQCLDVLRALSKEPGV LDALFAELGDGHGDARLAAHIGNLKAAFADTADIQYRARQLTEDVAIALQAKLLLEAG NSAVSDAFIGSRLGDGGRVYGTLPRGVEVEALLARATPHLT" misc_feature complement(4450905..4452518) /locus_tag="PA3972" /note="isovaleryl CoA dehydrogenase; Provisional; Region: PRK11561" /db_xref="CDD:183199" gene complement(4452536..4453183) /locus_tag="PA3973" /db_xref="GeneID:878595" CDS complement(4452536..4453183) /locus_tag="PA3973" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252662.1" /db_xref="GeneID:878595" /translation="MVYRVTERRLQRDSALRERILQLGLRRVVEGGFAALTMQALADD AGIATGSLYRHFRGKGELAAEIFRRASQREVDALAVVLRGPGAPAWRLAEGLRRFAAR AWSSQRLAFALIAEPVDPEVDEQRLRYREAYAALFVELLEEGRRSGAFQLSLVPLAAA CLVGAIAEALVGPLSPPARAARDSGQPEPSLEPVSTALVNFCLRAVGAPVCEEPS" misc_feature complement(4452686..4453153) /locus_tag="PA3973" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene complement(4453289..4455676) /gene="ladS" /locus_tag="PA3974" /db_xref="GeneID:878890" CDS complement(4453289..4455676) /gene="ladS" /locus_tag="PA3974" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="lost adherence sensor LadS" /protein_id="NP_252663.1" /db_xref="GeneID:878890" /translation="MRHWLILFLLALPCLAGAVSFNEQVERLPLGQSIDVFEDVRGSA DINDITSRAIDSSFRRHDKDVLNAGYSRSVFWLRLDLDYRPVASSDPRTWLLELAYPP LDKLDLYLPDGQGGYRLAQRTGDTLPFASRPIRQNNYLFELGLEPNKPQRVYLRLESQ GSIQAPLTLWSPKAYLEEQPERIYVLGIIYGVLLVMLIYNLFIFLSVRDTSYLYYILY IASFGLYQVSVNGAGIEYFWPDSPWWANAATPFLIGSAALFGCQFARSFLHTRDHSVW VDRGLLALMAVGALVMLMALTMSYAVALRLATYLALAFTGLIFAAGILAWLRGMRVAR YFIIAWTAFLLGGIVNTLMVLGYLPNMFLTMYASQIGSALEVGLLSLALADRINAMKE ERARILQESSRKLEALNQELANSNRLKDEFLATVTHELRTPMSGVIGSLELMQTVPMD VELAEYQRTAAGSARDMMRMVNDILALIELQAGKLYPRREPFSLRGLFDSLRAQYAPR VEEKGLRFALQLDDSLPDTLEGDAGKLAQALGYLVDNAIKFTARGSVTLRVAAGRTHD GVALRVEVIDTGIGFDMAAGSDLYQRFVQADSSLTRGYGGLGIGLALCRKLVELLGGE LTHESRPGQGSRFLLRLQLTQPAQGLAPPPRRAGGQAVRRPEECTVLVVEDNAINQLV TRGMLLKLGYRVRTADNGSEALELLARERPDGVLLDCQMPVMDGFATCRAIRALPGCA ELPVLALTAHSHSGDRERCLAAGMSDYMAKPVKFEELQTLLHDWLLCQPIVTKSA" misc_feature complement(4455179..4455577) /gene="ladS" /locus_tag="PA3974" /note="7TMR-DISM extracellular 2; Region: 7TMR-DISMED2; pfam07696" /db_xref="CDD:429601" misc_feature complement(4454519..4455133) /gene="ladS" /locus_tag="PA3974" /note="7TM diverse intracellular signalling; Region: 7TMR-DISM_7TM; pfam07695" /db_xref="CDD:429600" misc_feature complement(4453325..>4454470) /gene="ladS" /locus_tag="PA3974" /note="hybrid sensory histidine kinase BarA; Provisional; Region: PRK11107" /db_xref="CDD:236848" protein_bind 4455757..4455770 /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" protein_bind 4455825..4455838 /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" gene 4455887..4456684 /gene="thiD" /locus_tag="PA3975" /db_xref="GeneID:878891" CDS 4455887..4456684 /gene="thiD" /locus_tag="PA3975" /EC_number="2.7.4.7" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphomethylpyrimidine kinase" /protein_id="NP_252664.1" /db_xref="GeneID:878891" /translation="MKTPTSRPVVLCLSGHDPSGGAGLQADIEALLAQGCHAAPAVTA LTVQDTVNVSDFRVLDREWVLAQANAVLADLPVAAVKLGMLGSLEMVDTVAEILAAHP HLPVVCDPVLRAGGGGALGKGDVGFAMRERLLPRATIATPNLPEARLLADLPEGSADQ CAERLLEHCEHLLITGGHGDESEVHNRLYSRDGSRRTFTCQRLPGSYHGSGCTLASAL AGRIALGEALHGAVQSALDYTWRTLRDAESPGHGQYVPRRLPTDFCH" misc_feature 4455896..4456681 /gene="thiD" /locus_tag="PA3975" /note="bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed; Region: PRK06427" /db_xref="CDD:180561" misc_feature order(4455911..4455913,4455932..4455934,4455938..4455943, 4455947..4455949,4455959..4455961,4455968..4455973, 4455980..4455982,4455989..4456006,4456010..4456012, 4456019..4456033,4456046..4456051,4456055..4456057, 4456061..4456066,4456073..4456075,4456082..4456084, 4456094..4456099) /gene="thiD" /locus_tag="PA3975" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238574" misc_feature order(4455929..4455931,4455965..4455967,4456028..4456030, 4456136..4456138,4456520..4456522) /gene="thiD" /locus_tag="PA3975" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238574" misc_feature order(4456211..4456213,4456322..4456324,4456409..4456411, 4456511..4456513,4456517..4456519) /gene="thiD" /locus_tag="PA3975" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:238574" gene 4456695..4457324 /gene="thiE" /locus_tag="PA3976" /db_xref="GeneID:880858" CDS 4456695..4457324 /gene="thiE" /locus_tag="PA3976" /EC_number="2.5.1.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="thiamine-phosphate pyrophosphorylase" /protein_id="NP_252665.1" /db_xref="GeneID:880858" /translation="MKLRGLYAITDSQLLDDGRLLPYVEAALRGGARLLQYRDKSSDQ ARRLREAESLRELCERHGAQLIVNDDAELAARLGVGLHLGQTDGSLSAARALLGRQAI IGATCHAQLELAEQAVAEGASYVAFGRFFNSSTKPGAPAASVELLDQARPRLHLPITA IGGISLDTAPGLIARGVDLVAVIHALFAAASAAEVERRARAFSALFEPA" misc_feature 4456695..4457321 /gene="thiE" /locus_tag="PA3976" /note="thiamine phosphate synthase; Region: thiE; PRK00043" /db_xref="CDD:234590" misc_feature order(4456713..4456715,4456719..4456721,4456800..4456802, 4456806..4456808,4456938..4456940,4457010..4457012, 4457064..4457066,4457070..4457072,4457091..4457093, 4457097..4457099,4457169..4457171,4457181..4457183, 4457235..4457243) /gene="thiE" /locus_tag="PA3976" /note="thiamine phosphate binding site [chemical binding]; other site" /db_xref="CDD:238317" misc_feature order(4456800..4456802,4456806..4456808,4456812..4456814, 4456896..4456901,4456953..4456955,4457010..4457012, 4457091..4457093,4457097..4457102,4457181..4457183, 4457241..4457243) /gene="thiE" /locus_tag="PA3976" /note="active site" /db_xref="CDD:238317" misc_feature order(4456806..4456808,4456812..4456814,4456896..4456901, 4456944..4456946,4456953..4456955,4457010..4457012, 4457100..4457102) /gene="thiE" /locus_tag="PA3976" /note="pyrophosphate binding site [ion binding]; other site" /db_xref="CDD:238317" gene 4457362..4458645 /gene="hemL" /locus_tag="PA3977" /db_xref="GeneID:880859" CDS 4457362..4458645 /gene="hemL" /locus_tag="PA3977" /EC_number="5.4.3.8" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glutamate-1-semialdehyde aminotransferase" /protein_id="NP_252666.1" /db_xref="GeneID:880859" /translation="MSRSETLFNNAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYV LDEDDKRYVDYVGSWGPMILGHSHPDVLDAVRRQLDHGLSYGAPTALEVEMADLVCSM VPSMEMVRMVSSGTEATMSAIRLARGYTGRDSIIKFEGCYHGHSDSLLVKAGSGALTF GVPNSPGVPAAFAKHTLTLPFNDIEAVRKTLGEVGKEVACIIVEPVAGNMNCVPPAPG FLEGLREACDEHGVVLIFDEVMTGFRVALGGAQAYYGVTPDLSTFGKIIGGGMPVGAF GGKREIMQQISPLGPVYQAGTLSGNPLAMAAGLTTLRLISRPGFHDELTAYTTRMLDG LQQRADAAGIPFVTTQAGGMFGLYFSGADAIVTFEDVMASDVERFKRFFHLMLDGGVY LAPSAFEAGFTSIAHGDKELEITLNAAEKAFAALK" misc_feature 4457362..4458642 /gene="hemL" /locus_tag="PA3977" /note="glutamate-1-semialdehyde 2,1-aminomutase; Region: PRK00062" /db_xref="CDD:234607" misc_feature order(4457701..4457709,4457785..4457790,4457794..4457796, 4457971..4457973,4458070..4458072,4458076..4458081, 4458154..4458156) /gene="hemL" /locus_tag="PA3977" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99735" misc_feature order(4457704..4457709,4457785..4457790,4457971..4457973, 4458070..4458072,4458079..4458081,4458154..4458156) /gene="hemL" /locus_tag="PA3977" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature 4458154..4458156 /gene="hemL" /locus_tag="PA3977" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 4458854..4459402 /locus_tag="PA3978" /db_xref="GeneID:878901" CDS 4458854..4459402 /locus_tag="PA3978" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252667.1" /db_xref="GeneID:878901" /translation="MFRTGRTLALGCLLILQPLLAQAGGNSLLIPATGRCALNTVPEE LQQALAACQQVANGGDAEAQYELGEFFYDGERIPRDLQAALNWFEKASLQGHAQAQYH LGTMFFRGEGVPANNVQAYIVLKMAAVNGAEDALDSADLVAEQMNRDELDIATRVLGQ IFRNYLIELQTAGGVTPFAPLP" misc_feature <4458974..>4459258 /locus_tag="PA3978" /note="TPR repeat [General function prediction only]; Region: TPR; COG0790" /db_xref="CDD:440553" misc_feature 4458983..4459072 /locus_tag="PA3978" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" misc_feature 4459091..4459180 /locus_tag="PA3978" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" gene complement(4459418..4459750) /locus_tag="PA3979" /db_xref="GeneID:878902" CDS complement(4459418..4459750) /locus_tag="PA3979" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252668.1" /db_xref="GeneID:878902" /translation="MNKRENPIYKVIFLNQGQVFEMYAKQIYQSDLWGFLEIEEFVFG ERTQVVVDPSEEKLKAQFEGVLRSFVPMHAIVRIDEVERLGTPKISEAKGAGNVMPFP MPMPGKSD" misc_feature complement(4459430..4459744) /locus_tag="PA3979" /note="Uncharacterized conserved protein, DUF1820 domain [Function unknown]; Region: COG4517" /db_xref="CDD:443591" gene 4459879..4461219 /locus_tag="PA3980" /db_xref="GeneID:878903" CDS 4459879..4461219 /locus_tag="PA3980" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="(dimethylallyl)adenosine tRNA methylthiotransferase" /protein_id="NP_252669.1" /db_xref="GeneID:878903" /translation="MAKKLFIETHGCQMNEYDSSRMADLLGEHQALEVTENAAEADVI LLNTCSIREKAQEKVFSKLGMWRELKQQNPDLVIGVGGCVASQEGAAIRERAPYVDVV FGPQTLHRLPEMIDAARSTRKPQVDVSFPEIEKFDRLPEPRVDGPTAFVSVMEGCSKY CSFCVVPYTRGEEVSRPFDDVIAEVIHLAENGVREVTLLGQNVNGFRGLTHDGRLADF AELLRVVAAVDGIERIRYTTSHPLEFSDALIQAHAEVPELVKFIHLPVQSGSDRVLAA MKRNHTVLEYKSRIRKLKAAVPDICISSDFIVGFPGETEKDFEQTMKLVEDVGFDFSF SFIYSARPGTPAADLADDLPEEVKKQRLQILQSRIHQQGYEISRRMVGSTQRILVTDF SKKDPGMLQGRTENNRIVNFRCDNPRLIGQFAQVHIDDALPHSLRGTLIDSTLH" misc_feature 4459882..4461204 /locus_tag="PA3980" /note="tRNA A37 methylthiotransferase MiaB [Translation, ribosomal structure and biogenesis]; Region: MiaB; COG0621" /db_xref="CDD:440386" gene 4461388..4462410 /locus_tag="PA3981" /db_xref="GeneID:878904" CDS 4461388..4462410 /locus_tag="PA3981" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252670.1" /db_xref="GeneID:878904" /translation="MNAPQELHRFILEPFDARSFATLCGQFDEHLHQIEKRLDIEIRN RGNQFELAGEPRRTKVAERLLQRLYREAQNGTDLTPDTVHLYLQESGLEDLEELQSAP QVTLKSRKAHIRPRGANQQRYVKAILDHDINFGIGPAGTGKTYLAVACAVDALEREQI RRILLVRPAVEAGEKLGFLPGDLSQKIDPYLRPLYDALYEMLGFEHVAKLIERNVIEV APLAYMRGRTLNNSFIILDESQNTTVEQMKMFLTRIGFGSTAVITGDVTQVDLPRGTR SGLKHVIEVLQDVPGISFTHFKPKDVVRHPLVQRIVEAYERHESRQQGQVRPVEGTGK GGHDAA" misc_feature 4461400..4462362 /locus_tag="PA3981" /note="Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]; Region: PhoH; COG1702" /db_xref="CDD:441308" gene 4462400..4462882 /locus_tag="PA3982" /db_xref="GeneID:878897" CDS 4462400..4462882 /locus_tag="PA3982" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="metalloprotease" /protein_id="NP_252671.1" /db_xref="GeneID:878897" /translation="MPLELDLQVASAAPDLPSEAQFRAWCELALRQRPESELTIRLVD EAEGLELNSTYRHKDYATNVLSFPADVPDELLDIPLLGDLVICAPVVAREALEQRKPL QAHWAHLVIHGCLHLLGYDHIDDAEAEEMETLERELLAELGHPDPYACDDEEPPSKEK " misc_feature 4462406..4462837 /locus_tag="PA3982" /note="ssRNA-specific RNase YbeY, 16S rRNA maturation enzyme [Translation, ribosomal structure and biogenesis]; Region: YbeY; COG0319" /db_xref="CDD:440088" gene 4462879..4463718 /locus_tag="PA3983" /db_xref="GeneID:878898" CDS 4462879..4463718 /locus_tag="PA3983" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252672.1" /db_xref="GeneID:878898" /translation="MSEDRSSNGHKSWLDKITQAFAHEPRNRQELLELLRDAHDNKLL DSEALSIVEGAIQVADLQVRDIMVPRSQMMSIRSTQTPKEFLPAIIEAAHSRYPVVGE SLDDVMGVLLAKDLLPLILHNDERPFDIKELLRPATFVPESKRLNVLLREFRANRNHM AIVIDEYGGVAGLVTIEDVLEQIVGDIEDEHDVEEDSYIKPLPSGDFIVKALTPVDAF NDFFGSEFSDEEFDTVGGLVMSAFGHLPKRNEVVELGEFRFRVLNADSRRVHLLRLSP LQN" misc_feature 4462879..4463715 /locus_tag="PA3983" /note="Mg2+ and Co2+ transporter CorC, contains CBS pair and CorC-HlyC domains [Inorganic ion transport and metabolism]; Region: CorC; COG4535" /db_xref="CDD:443601" gene 4463904..4465439 /gene="lnt" /locus_tag="PA3984" /db_xref="GeneID:878907" CDS 4463904..4465439 /gene="lnt" /locus_tag="PA3984" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="apolipoprotein N-acyltransferase" /protein_id="NP_252673.1" /db_xref="GeneID:878907" /translation="MRWISRPGWPGHLLALAAGALTPLALAPFDYWPLAILSIALLYL GLRGLPGKSALWRGWWYGFGAFGAGTSWIYVSIHDYGAASVPLASLLMLGFTAGVAFF FALPAWLWARCLRRDNAPLGDALAFAALWLALELFRSWFLTGFPWLYAGYSQLQGPLA GLVPVGGVWLSSFVIALSAALLVNLPRLFPHGASLLLGLVLLLGPWAAGLYLKGHAWT HSAGEPLRVVAIQGNIAQELKWDPNQVRAQLDLYRDLSLPQQDVDLIVWPETAVPILQ DMASGYLGAMGQVADEKNAALITGVPVRERLADGKSRYFNGITVVGEGAGTYLKQKLV PFGEYVPLQDLLRGLIAFFDLPMSDFARGPADQPLLKAKGYQIAPYICYEVVYPEFAA ALAAQSQVLLTVSNDTWFGTSIGPLQHLQMAQMRALESGRWMIRATNNGVTGLIDPYG RIVRQIPQFQQGILRGEVIPMQGLTPYLQYRVWPLAGLAGVLLLWALLGRQLRPQERR LFG" misc_feature 4463985..4465412 /gene="lnt" /locus_tag="PA3984" /note="apolipoprotein N-acyltransferase; Reviewed; Region: lnt; PRK00302" /db_xref="CDD:234721" gene complement(4465489..4466250) /locus_tag="PA3985" /db_xref="GeneID:878908" CDS complement(4465489..4466250) /locus_tag="PA3985" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252674.1" /db_xref="GeneID:878908" /translation="MPIRYFFKQLLLPPGGLLLLLFFAFWWRTSRPRLARLCGVCGFF GLWLMSMPLSVEWMARWLESEPALLAEDLPGLAQRADAIVILGAGRQTNDPAWGDDAP SLLAAERLRYAARLAKTSALPVLISGGLHYGRPPSEAALMANALLQDFGVPTRWQEGL SRTTWENATLSAPQLREAGVRRVVLVTQAWHMQRARWSFERQGFEVIPAPVGFLGGAN LRPFGGWLPEAQAFWQSGMLLNEAIGLVGYRLFYR" misc_feature complement(4465492..4466145) /locus_tag="PA3985" /note="Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family [Cell wall/membrane/envelope biogenesis]; Region: ElyC; COG1434" /db_xref="CDD:441043" gene complement(4466323..4466754) /locus_tag="PA3986" /db_xref="GeneID:878924" CDS complement(4466323..4466754) /locus_tag="PA3986" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252675.1" /db_xref="GeneID:878924" /translation="MAELQRASVTGGGLYERLLQRLALALDEADTAERLRDEHPTELE LRGLSEAEMGLIRAYLDQDLHWLRGWHAAAEELALLERQPGRTPRPPRPQPPAPRRHV SLKQRQLLCALCGAPVQWSKGHGVLPCGHCGSQLFRSGNGR" gene 4466925..4469546 /gene="leuS" /locus_tag="PA3987" /db_xref="GeneID:878925" CDS 4466925..4469546 /gene="leuS" /locus_tag="PA3987" /EC_number="6.1.1.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="leucine--tRNA ligase" /protein_id="NP_252676.1" /db_xref="GeneID:878925" /translation="MHEQYQPLEIETQAQNYWKEHQSFLVRELPDKEKFYCLSMFPYP SGKLHMGHVRNYTIGDVISRYHRMQGRNVLQPMGWDAFGMPAENAAMKNNVAPAAWTY DNIAYMKSQLDSLGLAIDWSREVTTCKPDYYRWEQWLFTRLFEKGVIYRKNGTVNWDP VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITAYAEELLESLDNLPGWPEQVKT MQRNWIGKSRGMEIGFPYDQASIGHAGQLKVFTTRPDTLMGATYVAVAAEHPLATQAA QNDPQLQAFIDECKRGGVAEADIATQEKKGMATSLFVEHPLTGDKLPVWVANYVLMNY GEGAVMAVPGHDERDFEFANKYGLPIRQVIAKVEGDNDFESSVWKEWYGAKDESVLTV NSGKYDNLGYQAAFDAIGADLEAKGLGQARTQFRLRDWGISRQRYWGCPIPIIHCEAC GDVPVPADQLPVVLPEDVVPDGSGSPLAKMPEFYECNCPKCGQPAKRETDTMDTFVES SWYFARYACPQFEGGMLDRKAADYWLPVDQYIGGIEHAILHLLYARFFHKLMRDEGLV GSDEPFKNLLTQGMVVADTYYRTTANGGKDWFNPADVEVERDAKAKVVGARLKSDGQP VEIGGTEKMSKSKNNGVDPQSMIDQYGADTCRLFMMFASPPDMSLEWSDAGVEGANRF LRRVWRLAHAHVSAGLPGALDVAALSDAQKQVRRAIHLAIRQASQDVGQHHKFNTAIA AVMTLMNVLEKAPNQDAQDRALIQEGLETVVLLLAPITPHICHVLWGQLGHAEAVIDA RWPSVDESALVQDTLQLVVQVNGKLRGHIDVAASASREDVEAAARANENVLRFTEGLS IRKVIVVPGKLVNIVAN" misc_feature 4466925..4469543 /gene="leuS" /locus_tag="PA3987" /note="Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: LeuS; COG0495" /db_xref="CDD:440261" gene 4469613..4470236 /locus_tag="PA3988" /db_xref="GeneID:878911" CDS 4469613..4470236 /locus_tag="PA3988" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252677.1" /db_xref="GeneID:878911" /translation="MKRILTSAALIGMTTLLAACGFQLRGLGDAQFALKEIDVSARNA YGPTVRELKETLENSGVKVTSNAPYHLVLVREDNQQRTVSYTGSARGAEFELTNTINY EIVGANDLVLMSNQVQVQKVYVHDENNLIGSDQEAAQLRSEMRRDLIQQLSMRLQALT PAQLDEAQRQAEAKAKAEAEALRAADEAERQRRAAEPQQSPIEFPTP" misc_feature 4469613..4470110 /locus_tag="PA3988" /note="Outer membrane lipoprotein LptE/RlpB (LPS assembly) [Cell wall/membrane/envelope biogenesis]; Region: LptE; COG2980" /db_xref="CDD:442219" gene 4470274..4471311 /gene="holA" /locus_tag="PA3989" /db_xref="GeneID:878936" CDS 4470274..4471311 /gene="holA" /locus_tag="PA3989" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit delta" /protein_id="NP_252678.1" /db_xref="GeneID:878936" /translation="MKLTPAQLAKHLQGPLAPVYVVSGDEPLLCQEACDAIRQACRER DFGERQVFNAEANFDWGLLLEAGASLSLFAEKRLIELRLPSGKPGDKGAAILQEYLQR PPEDTVLLLGLPKLDGSTQKTKWAKALIDGNAAQFIQVWPVDVHQLPQWIRQRLSQAG LSASPEALELIAARVEGNLLAAAQEIEKLKLLAEGNQIDAATVQAAVADSARFDVFGL IDAALGGEAAHALRILEGLRGEGIEPPVILWGLAREIRLLAGLSQQYGQGIPLEKAFA QARPPVWDKRRPLLTRALQRHSSSRWNQMLRDAQLIDAQIKGQAPGSPWSGLSLLALS LAGQRLGLPAA" misc_feature 4470364..4471248 /gene="holA" /locus_tag="PA3989" /note="DNA polymerase III, delta subunit; Region: holA; TIGR01128" /db_xref="CDD:273455" gene 4471403..4471555 /locus_tag="PA3990" /db_xref="GeneID:878937" CDS 4471403..4471555 /locus_tag="PA3990" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252679.1" /db_xref="GeneID:878937" /translation="MAKKSKRPNKAKSLVAQPLFRSRQEQAKKGKGSYRREASRNWEA SFVMAA" misc_feature 4471427..4471537 /locus_tag="PA3990" /note="Alternative ribosome-rescue factor A; Region: ArfA; cl27226" /db_xref="CDD:474904" gene 4472131..4473477 /locus_tag="PA3992" /db_xref="GeneID:878935" CDS 4472131..4473477 /locus_tag="PA3992" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252681.1" /db_xref="GeneID:878935" /translation="MRNPERSALLKVSGLLGSTVVAMGLGLSSACAQKNPTVEYNQPA APLQTKAPFSGAGPAASVPAGAPNEAQPGQSFEQWRDAFRQQALAGGIDAQTFDRAFA GVQPDPAVVEADRSQPEFTRPVWKYLEGALDPLRVRQGQARLAQHARILGEVDARYAV DADAVVAIWGMESNYGSHMGNKNVIRSLATLAYEGRRPEFAHAQLLAALKILQHGDVP ASFMIGSWAGAMGQTQFIPTTHNQYAVDFDGDGKRDIWGSPGDALASTANYLKASGWI AGQPWGFEVRLPAGFDYSLAELTIRKPLGEWQGMGVQGVNGGPLPSGLSGEQASLLLP AGHRGPAFLVLHNFRAILKYNNSSAYALAVGLLADSFKGGGRIVGAWPLEDVPLSRSQ RIELQRQLAARGHDPGAVDGIIGANTRKAIRACQQEFGWPADGYPTPALLDRLRTP" misc_feature 4472296..4473252 /locus_tag="PA3992" /note="Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis]; Region: MltB; COG2951" /db_xref="CDD:442193" misc_feature <4473313..4473471 /locus_tag="PA3992" /note="Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis]; Region: PGRP; COG3409" /db_xref="CDD:442635" protein_bind complement(4472624..4472636) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 4472662..4472674 /locus_tag="PA3992" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4473623..4474639 /locus_tag="PA3993" /db_xref="GeneID:878942" CDS 4473623..4474639 /locus_tag="PA3993" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_252682.1" /db_xref="GeneID:878942" /translation="MNLSRIGLDLAKQVFQVHGVDRHEHVVCRRQLKRAQVRDFFRQL PPCLVAMEACGSAHYWARELRELGHTVRLIAPQFVKPYVKGDKHDAHDAEAICEAASR PSMRYVPVKSAEQQAVQSMHRVRSRLVRARTALCNEVRGLLGEFGLIATRRGRAATMA LLETVMATEPAPLPAPMGELLRELKDELQTLEARIARLERQIQAHVRGDARIQRLLAV EGIGPISASAVAASAGDARQFRTGRQFAAWLGLVPRQHSTGGQQRLGNISKRGDTYLR TLLIHGARAVVRCCANKTDARSRWLQGLLQRRPANVVAVALANKNARILWALLSRETC YRPG" misc_feature 4473638..4474621 /locus_tag="PA3993" /note="IS110 family transposase; Region: transpos_IS110; NF033542" /db_xref="CDD:468073" gene complement(4474959..4475849) /locus_tag="PA3994" /db_xref="GeneID:878943" CDS complement(4474959..4475849) /locus_tag="PA3994" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="epoxide hydrolase" /protein_id="NP_252683.1" /db_xref="GeneID:878943" /translation="MSRYAFVSTDVLDIAYLEWNPQGARSAVLLHGWPDSPHTWKDLA ESLADAGYRVLAPALRGFAPTRFRDASTPRSGQLAALACDLLAFVDSLALQRPLLVGH DWGARAVASACGLREGVASHLVMLSVGYASNDPQQVLSLPQARSFWYQWFMATPRGER ALREEGEAFARQMWDTWSPPGWYAERDFQEAAQAFSGPDWVAVVLHYYRHRWGFVAGK PRYGAAEQRLLPAPRLALPTLVLHGGADACTHPDGSRGREHYFSGRYQRLVLEGVGHF PQREAATQVADAILRFCADD" misc_feature complement(4474968..4475849) /locus_tag="PA3994" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene 4475955..4476848 /locus_tag="PA3995" /db_xref="GeneID:878930" CDS 4475955..4476848 /locus_tag="PA3995" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252684.1" /db_xref="GeneID:878930" /translation="MELAVPTSQSLDIVLLRTFLEVVDSGGFALAADNLALTPSAVSG HIKRLEQTAGVSLLSRTTRRLELTQAGETLYAYARNIVELEREARARLHGTPIRDRLR IGASEDFASAWLPRVLQRFRRWHPEASIELKVGITTDLLRQQAQGRTDVVFGKQCRRV GDDGELLWEEPLVWAAATAIELPAGEPLPLALFPEPCVYREAAITALGAAARPWRLVF ESASMAGCLSAALAGFAVTVVARSQMREGLRELGPEQGFPTLPEARFYAFSRQPSLAA DALIEAVRQLGQRSRFVTAQG" misc_feature 4475985..4476821 /locus_tag="PA3995" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene complement(4476994..4477977) /gene="lis" /locus_tag="PA3996" /db_xref="GeneID:878931" CDS complement(4476994..4477977) /gene="lis" /locus_tag="PA3996" /EC_number="2.8.1.8" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="lipoyl synthase" /protein_id="NP_252685.1" /db_xref="GeneID:878931" /translation="MSTVVEKSGEAKPGKVEVGVKLRGAEKVARIPVKIIPTEELPKK PDWIRVRIPVSPEVDRIKQLLRKHKLHSVCEEASCPNLGECFSGGTATFMIMGDICTR RCPFCDVGHGRPKPLDVDEPTNLAIAIADLRLKYVVITSVDRDDLRDGGAQHFADCLR EIRKLSPGIQLETLVPDYRGRMDIALEITANEPPDVFNHNLETVPRLYRSSRPGSDFE WSLDLLQKFKQMVPHVPTKSGLMLGLGETDDEVIEVMQRMREHDIDMLTLGQYLQPSR NHLPVQRFVHPDTFAWFAEEGEKMGFKNVASGPLVRSSYHADQQAHGNKIG" misc_feature complement(4476997..4477902) /gene="lis" /locus_tag="PA3996" /note="Lipoate synthase [Coenzyme transport and metabolism]; Region: LipA; COG0320" /db_xref="CDD:440089" gene complement(4477974..4478627) /gene="lipB" /locus_tag="PA3997" /db_xref="GeneID:878952" CDS complement(4477974..4478627) /gene="lipB" /locus_tag="PA3997" /EC_number="2.3.1.181" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="lipoate-protein ligase B" /protein_id="NP_252686.1" /db_xref="GeneID:878952" /translation="MGLELGFRELGEVPYEPTWHAMQRFVAERDKSVMDEAWLLQHPA VFTQGQAGKAEHVLFPGDIPVIQVDRGGQVTYHGPGQLVTYLLLDVRRLGLGVRELVS RIEQSLIGLLASYDVQAVAKPDAPGVYVDGAKIASLGLRIRNGCSFHGLALNLDMDLR PFQRINPCGYAGMPMTQLRDLVGPVDFAEVCTRLRAELVSRLGYAEQKTLTGGIELT" misc_feature complement(4477992..4478627) /gene="lipB" /locus_tag="PA3997" /note="lipoyl(octanoyl) transferase LipB; Region: PRK14342" /db_xref="CDD:237681" misc_feature complement(order(4478172..4478180,4478211..4478219, 4478226..4478228,4478373..4478375,4478397..4478399, 4478403..4478414,4478418..4478420)) /gene="lipB" /locus_tag="PA3997" /note="active site" /db_xref="CDD:319743" gene complement(4478627..4478908) /locus_tag="PA3998" /db_xref="GeneID:878953" CDS complement(4478627..4478908) /locus_tag="PA3998" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252687.1" /db_xref="GeneID:878953" /translation="MTDTPDVQPPKIEFPCERYPIKVIGDAGEGFSDLVVEIIQRHAP DLDVETLVVRDSSKGRFLSVQVLITATDVDQLQAIHNDLRATGRVHMVL" misc_feature complement(4478630..4478908) /locus_tag="PA3998" /note="DUF493 domain-containing protein; Region: PRK00341" /db_xref="CDD:166914" gene complement(4478979..4480139) /gene="dacC" /locus_tag="PA3999" /db_xref="GeneID:878956" CDS complement(4478979..4480139) /gene="dacC" /locus_tag="PA3999" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="D-ala-D-ala-carboxypeptidase" /protein_id="NP_252688.1" /db_xref="GeneID:878956" /translation="MNITTIAKRLSLLVLFIAPTAGWAAESMVPAPPQLAAKSYVLMD GESGQVLVENNGDQRLPPASLTKLMTAYIATKEIEAGRIGENDLVTVSEHAWRTGGSR MFIKVGSQVSVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADMMNTTAQKLGLTNSH FMDATGLPNPDHYSSARDMAVLARAIIYGEPSHYAIYAQKEFLWNNIKQPNRNLLLWR DKTVDGLKTGHTDEAGYCLVASAVRDGQRMIAVVFGTNSEQARAAETQKLLTYGFRFF ESRNFYKKGTELTKGLVWKGSEHEVKAGLAEDLTMTLPRGQMQKLQASMVLEPQLMAP IQQGQVIGKVEVKLDDKVIRSADLVALNAVEEGGFFRRLWDSIRLFFYGLFN" misc_feature complement(4479024..4480118) /gene="dacC" /locus_tag="PA3999" /note="D-alanyl-D-alanine carboxypeptidase [Cell wall/membrane/envelope biogenesis]; Region: DacC; COG1686" /db_xref="CDD:441292" gene complement(4480205..4481233) /locus_tag="PA4000" /db_xref="GeneID:878957" CDS complement(4480205..4481233) /locus_tag="PA4000" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252689.1" /db_xref="GeneID:878957" /translation="MSKRVRSSLILPAVCGLGLAAVLLSSCSSKAPQQPARQAGISGP GDYSRPHRDGAPWWDVDVSRIPDAVPMPHNGSVKANPYTVLGKTYYPMNDARAYRMVG TASWYGTKFHGQATANGETYDLYGMTAAHKTLPLPSYVRVTNLDNGKSVIVRVNDRGP FYSDRVIDLSFAAAKKLGYAETGTARVKVEGIDPVQWWAQRGRPAPMVLAQPKQAVAQ AAPAAAQTQAVAMAQPIETYTPPPAQHAAAVLPVQIDSKKNASLPADGLYLQVGAFAN PDAAELLKAKLSGVTAAPVFISSVVRNQQILHRVRLGPIGSADEVSRTQDSIRVANLG QPTLVRPD" misc_feature complement(4480643..4480999) /locus_tag="PA4000" /note="Peptidoglycan lytic transglycosylase RlpA, contains C-terminal SPOR domain [Cell wall/membrane/envelope biogenesis]; Region: RlpA; COG0797" /db_xref="CDD:440560" misc_feature complement(4480208..>4480516) /locus_tag="PA4000" /note="Cell division protein FtsN [Cell cycle control, cell division, chromosome partitioning]; Region: FtsN; COG3087" /db_xref="CDD:442321" gene complement(4481230..4482252) /gene="sltB1" /locus_tag="PA4001" /db_xref="GeneID:878946" CDS complement(4481230..4482252) /gene="sltB1" /locus_tag="PA4001" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="soluble lytic transglycosylase B" /protein_id="NP_252690.1" /db_xref="GeneID:878946" /translation="MKNAMQVLRTWAARGVQWVGVAGVIGLSGAAQAGDYDGSPQVAE FVSEMTRDYGFAGEQLMGLFRDVNRKQSILDAISRPAERVKQWKEYRPIFISDARISR GVDFWNKHAEDLARAEKEYGVPAEIIVSIIGVETFFGRNTGSYRVMDALSTLGFDYPP RADFFRKELREFLLLAREQQVDPLSLTGSYAGAMGLPQFMPSSFRAYAVDFDGDGHIN IWSDPTDAIGSVASYFKQHGWVTGEPVVSVAEINDESAESAVTRGVDPTMSLGELRAR GWRTHDALRDDQKVTAMRFVGDKGIEYWVGLPNFYVITRYNRSAMYAMAVYQLAGEIA RARGAH" misc_feature complement(4481236..4482171) /gene="sltB1" /locus_tag="PA4001" /note="Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis]; Region: MltB; COG2951" /db_xref="CDD:442193" gene complement(4482261..4483364) /gene="rodA" /locus_tag="PA4002" /db_xref="GeneID:878947" CDS complement(4482261..4483364) /gene="rodA" /locus_tag="PA4002" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="rod shape-determining protein" /protein_id="NP_252691.1" /db_xref="GeneID:878947" /translation="MRRRASLLQRLHIDGILLLLLLILGATGLFVLYSASGKSWDMLM KQATSFGLGLGMMVVIAQIEPRFMARWVPLGYLVGVALLVVVDVIGHDAKGATRWINI PGVIRFQPSEFMKLLMPMTVAWYLSKRNLPPGLKHMVISLAIIITPFVLILKQPDLGT AMLILASGGFVLFVGGLRWRWIVGAVSAAVPIAVAMWFFIMHDYQKQRVLTFLDPESD PLGTGWNIIQSKAAIGSGGVFGKGWLLGTQSHLDFLPESHTDFIIAVLGEEFGLVGVC LLLVLYLLLISRGLVITAQAQTLYGKLLAGGITMTFFVYVFVNIGMVSGLLPVVGVPL PFISYGGTSLVTLLSGFGVLMSIHTHRKWIAQV" misc_feature complement(4482279..4483277) /gene="rodA" /locus_tag="PA4002" /note="rod shape-determining protein RodA; Region: rodA_shape; TIGR02210" /db_xref="CDD:274033" gene complement(4483396..4485336) /gene="pbpA" /locus_tag="PA4003" /db_xref="GeneID:878962" CDS complement(4483396..4485336) /gene="pbpA" /locus_tag="PA4003" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 2" /protein_id="NP_252692.1" /db_xref="GeneID:878962" /translation="MPQPIHLKDHEKDARLVRRRVIVGAVAVVLLTLVLVARMYHLQV TQYEYHSTLSENNRVHVQPIPPTRGIIFDRNGVIIADNRPSFSLTITRERTEDLQKTL DTLVEILGLTEDDRAIFEKRMKQGRRPFEPVPIMFELNEEQIARIAVNQFRLPGVDVA TQFVRHYPLKEHFAHSVGYVGRINEQELKNLDPINYSGTHHIGKTGIERFYESELHGT VGYEEVETNARGRVLRVLKRTDPIPGKDIVLSIDSRLQEAAENALAGRRGAIVAIQPS TGDVLAMVSQPSYDPNLFVTGISFKAYAELRDSIDRPLYNRVLRGLYPPGSTVKPAVA LAGLDAGVVTPTSRVFDPGYYQLPNYDHKYRNWNRYGDGWVSLESAIYRSNDTYFYDL AHKLGIDRLHAFMSRFGFGQKVALDMFGEADGLMPSREWKRKTRRQVWYPGETLILGI GQGYMQATPIQLAQMTALLANKGHWIRPHLAKTIDGQPPVDPDPMPDIVLRDPANWDR VDYGMQQVVHGARGTARKVGATSAYLIAGKSGTAQVVAIKQNERYDRSKLLERHRDHA LFVGFAPANNPQIAVAVMVENGESGSGVAAPVVKQVMDAWLLDEHGKLKAEYAEPVAP LAAAVAKPEPTAAEPEAPALEQ" misc_feature complement(4483510..4485225) /gene="pbpA" /locus_tag="PA4003" /note="penicillin-binding protein 2; Region: pbp2_mrdA; TIGR03423" /db_xref="CDD:274573" gene complement(4485349..4485816) /locus_tag="PA4004" /db_xref="GeneID:878973" CDS complement(4485349..4485816) /locus_tag="PA4004" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH" /protein_id="NP_252693.1" /db_xref="GeneID:878973" /translation="MRLRLIAVGSRMPRWVEEGWQEYVKRLPAELSLELVEIPLNTRG KNADVARLIRQEGEAMLARVQPGERVVTLEVEGRPWSTEQLARELDRWRLDARTVNLM VGGPEGLAPEVCARSEQRWSLSPLTLPHPLVRILVGEQIYRAWTVLSGHPYHK" misc_feature complement(4485352..4485816) /locus_tag="PA4004" /note="rRNA large subunit methyltransferase; Provisional; Region: PRK00103" /db_xref="CDD:234634" misc_feature complement(order(4485388..4485390,4485397..4485402, 4485409..4485414,4485421..4485423,4485430..4485450, 4485454..4485456,4485571..4485582,4485748..4485753, 4485760..4485765,4485769..4485777)) /locus_tag="PA4004" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:349954" misc_feature complement(order(4485418..4485420,4485433..4485441, 4485445..4485456,4485493..4485495,4485499..4485510, 4485592..4485600)) /locus_tag="PA4004" /note="SAM binding site [chemical binding]; other site" /db_xref="CDD:349954" gene complement(4485824..4486180) /locus_tag="PA4005" /db_xref="GeneID:878974" CDS complement(4485824..4486180) /locus_tag="PA4005" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252694.1" /db_xref="GeneID:878974" /translation="MQTEQLVQVAIDALEDLKAQDIVTLDVRDKTSVTDYMVIACGSS SRQVKSLADNVLTKAKENGVKPLGSEGLESGEWALLDLGDVVVHVMLPATRQFYDLER LWQGAEQSRAQHQPEE" misc_feature complement(4485854..4486180) /locus_tag="PA4005" /note="Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits [Translation, ribosomal structure and biogenesis]; Region: RsfS; COG0799" /db_xref="CDD:440562" gene complement(4486203..4486847) /gene="nadD" /locus_tag="PA4006" /db_xref="GeneID:878969" CDS complement(4486203..4486847) /gene="nadD" /locus_tag="PA4006" /EC_number="2.7.7.18" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nicotinic acid mononucleotide adenylyltransferase" /protein_id="NP_252695.1" /db_xref="GeneID:878969" /translation="MGKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPP HRETPQVSAAQRLAMVERAVAGVERLTVDPRELQRDKPSYTIDTLESVRAELAADDQL FMLIGWDAFCGLPTWHRWEALLDHCHIVVLQRPDADSEPPESLRDLLAARSVADPQAL KGPGGQITFVWQTPLAVSATQIRALLGAGRSVRFLVPDAVLNYIEAHHLYRAPH" misc_feature complement(4486215..4486841) /gene="nadD" /locus_tag="PA4006" /note="Nicotinate-nucleotide adenylyltransferase NadD [Coenzyme transport and metabolism]; Region: NadD; COG1057" /db_xref="CDD:440677" gene complement(4486847..4488112) /gene="proA" /locus_tag="PA4007" /db_xref="GeneID:878970" CDS complement(4486847..4488112) /gene="proA" /locus_tag="PA4007" /EC_number="1.2.1.41" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="gamma-glutamyl phosphate reductase" /protein_id="NP_252696.1" /db_xref="GeneID:878970" /translation="MTESVLDYMSRLGRDARAASRLLARAATAQKNRALLAAADALDA ARAELSHANEQDLAAGRANGLEPAMLDRLALTPARIDDMIEGLRQVATLPDPIGEIRD MRYVPSGIQIGKMRVPLGVVGIIYESRPNVTIDAASLCLKSGNATILRGGSEAIHSNQ AIARCIQQGLAEAGLPAAAVQVVETTDRAAVGALISMPEYVDVIVPRGGKGLIERISR EAKVPVIKHLDGICHVYIDVAADLDKAIRVADNAKTQRYAPCNTMETLLVHAGIAERV LPPLATIYREKGVELRGDAATRALLGADVLEATEEDWRTEYNAPILSIRIVDGLDAAI EHINTYGSQHTDAIITENFSDARRFLAEVDSASVMVNASTRFADGFEYGLGAEIGIST DKLHARGPVGLEGLTSEKYVVFGDGHVRT" misc_feature complement(4486853..4487959) /gene="proA" /locus_tag="PA4007" /note="gamma-glutamyl phosphate reductase; Provisional; Region: proA; PRK00197" /db_xref="CDD:234685" misc_feature complement(4487333..4487335) /gene="proA" /locus_tag="PA4007" /note="putative catalytic cysteine [active]" /db_xref="CDD:143398" gene 4488410..4489633 /locus_tag="PA4008" /db_xref="GeneID:878981" CDS 4488410..4489633 /locus_tag="PA4008" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_252697.1" /db_xref="GeneID:878981" /translation="MRYRTDYSAQSLSSEPDILFLDGWQLRYQAFAARADDPRPPVLL LGGAFQSFRSFTGEVSELLAEHPVILLDLPSQGGNLQLAAELSLEDLADLIAAFAEQL GLPPLMPIGLSYGSALAALFAARHPRRCARLLLAGITAFGRPGARLLLEEALARLDEG DQSAFAHGVLTGLINPLQLERTGVSPVFRKAMLRQLQRLTAAEIERYRQNSRRLLAFG GFERHPTCPTLVLAGEYDHFTQPWEHAVFAHACGNAEFALIHDADHLAQFERREACAR LYGPFLRGEALPERAEGSTRIPRTRLLGLERRFEVRHRPAQGHARLEHPQFGVYAAEL MELGYFGGRLHAELPESRPQRGWRLCCDGLADLDILPLRSTADGFAFIFPHSDPAASA GLADLLAAWERAEVA" misc_feature 4488449..4489261 /locus_tag="PA4008" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene complement(4489641..4490498) /locus_tag="PA4009" /db_xref="GeneID:878982" CDS complement(4489641..4490498) /locus_tag="PA4009" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252698.1" /db_xref="GeneID:878982" /translation="MVERERVDSAHITPSAHYTGYVWFRHRLAEPAFATVFGRWVHGF VAPINWGAQLGFGLNIEDFLLQRHLMIDARLTQAVEREGVVQVVEMACGLSPRGRRFR QRYPQLRYLEADLPPMAARKAALLREQGWLGPEHAVAAVDILAEDGERSLAALFAGLD RERPLVVITEGLVNYFQRPVIEAFWSRLATELKRFPQGTYLTDLYPDLREHPRYRQIR WGVGIIGRLTRGSYPLHYRNAAEIEAAFARCGFASTLVLDPQREGAALGLPQGRLPSL VRVIESRTA" misc_feature complement(4489659..4490369) /locus_tag="PA4009" /note="O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport and catabolism]; Region: YktD; COG3315" /db_xref="CDD:442544" gene 4490562..4491281 /locus_tag="PA4010" /db_xref="GeneID:878960" CDS 4490562..4491281 /locus_tag="PA4010" /EC_number="3.2.2.-" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="3-methyladenine DNA glycosylase" /protein_id="NP_252699.1" /db_xref="GeneID:878960" /translation="MSRDPILSLPWPDARPLPDTFFDRDALLVARELLGKVIRHRQGN LWLAARIIETEAYYLEEKGSHASLGYTEKRKALFLDGGHIYMYYARGGDSLNFSAGGP GNAVLIKSGHPWLDRISDHTALERMQSLNPDSQGRPREIGRLCAGQTLLCKAMGLKVP EWDAQRFDPQRLFVDDVGERPSQVIQAARLGIPKGRDEHLPYRFVDAAFAAFCTRNPL RRGQVAGRDYHLLGHQDPHLQ" misc_feature 4490598..4491200 /locus_tag="PA4010" /note="DNA-3-methyladenine glycosylase; Region: PRK00802" /db_xref="CDD:234840" misc_feature order(4490724..4490726,4490730..4490732,4490754..4490756, 4490814..4490816,4490829..4490831,4490847..4490849, 4490880..4490882,4490886..4490888,4491129..4491131) /locus_tag="PA4010" /note="active site" /db_xref="CDD:187726" misc_feature order(4490730..4490732,4490748..4490750,4490754..4490756, 4490769..4490771,4490775..4490777,4490781..4490783, 4490820..4490822,4490829..4490831,4490835..4490837, 4490847..4490849,4490880..4490882,4490886..4490888, 4490940..4490942,4491000..4491011,4491039..4491041, 4491129..4491134) /locus_tag="PA4010" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:187726" gene 4491278..4492591 /locus_tag="PA4011" /db_xref="GeneID:878961" CDS 4491278..4492591 /locus_tag="PA4011" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252700.1" /db_xref="GeneID:878961" /translation="MSLDSFNAWMAANPEWLGLAIFLIAFLECAAIVGIVLPGVVLLF GVAVIAGSGALGLGETLLLAYAGGVLGDLSSYWIGRRFHQNIRRLPGLRSHPQWITAA EVYFERYGIASLLVGRFIGALRPMLPMVAGMLDMPFGRFLGVSLIAAAGWAVAYLLPG WATGAALRLPLPEGFWSEAGIVAACLAVLVGVVVQASLRRKRWATAVAAALSLVLLLA MTVAWPYLQDLDQGLMTLVQEHRNADLNPVMVVVTRLGDFRTQFIAGALLGGILLLTR QWRPAIFAIGTLVGTALANQTLKTLFARARPEVLAEPLSSFSFPSGHSSASFAFFLTL GVLASRQQPPRWRLTWVLLAVIPSLSIALSRVYLGVHWPSDIVAGALLATTVCAASLW LSQRRESLPALPQRVWWLLLPVCVATLAIAAGWALPEAIARYRPL" misc_feature 4491278..4491883 /locus_tag="PA4011" /note="Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family [Cell wall/membrane/envelope biogenesis]; Region: DedA; COG0586" /db_xref="CDD:440351" misc_feature 4491962..4492468 /locus_tag="PA4011" /note="PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase; Region: PAP2_like_2; cd03392" /db_xref="CDD:239486" misc_feature order(4492172..4492174,4492193..4492195,4492238..4492246, 4492370..4492372,4492388..4492390,4492400..4492402) /locus_tag="PA4011" /note="active site" /db_xref="CDD:239486" gene complement(4492602..4493195) /locus_tag="PA4012" /db_xref="GeneID:878996" CDS complement(4492602..4493195) /locus_tag="PA4012" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252701.1" /db_xref="GeneID:878996" /translation="MKLPLFPLNAVLFPGCRLDLQIFEARYLDMISRCMKQGTGFGVV TIGEGREVGEAPSRLAMVGCEASVRDWQQRPNGLLGIRVEGGRRFQVLSVEVQADQLS VGEIEWFEDLPEQPLTYEHNDLAALLSVLAEHPMVAALEMGGEPGGQQDLANQLAYLL PFDTERKLELLALPDAQMQLARIQVLLEHLQGELGID" misc_feature complement(4492617..4493195) /locus_tag="PA4012" /note="Uncharacterized conserved protein, LON_N-like domain, ASCH/PUA-like superfamily [Function unknown]; Region: LON/PUA; COG2802" /db_xref="CDD:442054" gene complement(4493215..4493925) /locus_tag="PA4013" /db_xref="GeneID:878997" CDS complement(4493215..4493925) /locus_tag="PA4013" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252702.1" /db_xref="GeneID:878997" /translation="MAWHAALEAVIHHPLFGVGVTLGAYQLALAAYERTRWVFLQPVL VSMLVVIGVLLLCGIDYDEYSASAKVLTILLGPATVALAVPLFLNLRRIRQLFWPTLL TLVVAGTLATVLGIAFGWLFGAEPRMLMSMAPKSVTSPIAMLVASQIGGVAALAAVFV LITGVLGAILGPELLSAIGVRHPAAQGMALGMTAHAVGTSRALQEGEECGAFAALAMS LMGVATAVLLPLAVALVA" misc_feature complement(4493218..4493901) /locus_tag="PA4013" /note="Putative effector of murein hydrolase [Cell wall/membrane/envelope biogenesis]; Region: LrgB; COG1346" /db_xref="CDD:440957" gene complement(4493925..4494335) /locus_tag="PA4014" /db_xref="GeneID:878994" CDS complement(4493925..4494335) /locus_tag="PA4014" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252703.1" /db_xref="GeneID:878994" /translation="MSRRAGHNGRPLLEVPMLLRGLTWLVLFQLLGTGLNVLLLPMLP GPIIGLVLLFGYFLARGEVGKPVNEAAGSLLRYLPLLLVPAAVGVMAYAREIAADFWA IVGALVLSLLLSFLFAGWMMQKLIDRQQRRREES" misc_feature complement(4493928..4494284) /locus_tag="PA4014" /note="Putative effector of murein hydrolase LrgA, UPF0299 family [General function prediction only]; Region: YohJ; COG1380" /db_xref="CDD:440990" gene 4494481..4494936 /locus_tag="PA4015" /db_xref="GeneID:878995" CDS 4494481..4494936 /locus_tag="PA4015" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252704.1" /db_xref="GeneID:878995" /translation="MPFVPVAALKDYVGKDLGHSEWLTIDQERVDQFAECTGDHQFIH VDPEKAAKTPFGGTIAHGFLSLSLIPKLMEGLLVLPEGLKMAVNYGLDTVRFIQPVRV GSRVRLGLTLLDVNEKNPGQWLIKARATLEIEGQEKPAYIAETLSLCFV" misc_feature 4494487..4494933 /locus_tag="PA4015" /note="NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their...; Region: NodN; cd03450" /db_xref="CDD:239534" misc_feature order(4494580..4494582,4494595..4494597,4494601..4494603, 4494610..4494612,4494655..4494657,4494664..4494669) /locus_tag="PA4015" /note="putative active site [active]" /db_xref="CDD:239534" misc_feature order(4494595..4494597,4494601..4494603,4494610..4494612, 4494664..4494666) /locus_tag="PA4015" /note="putative catalytic site [active]" /db_xref="CDD:239534" gene 4495126..4496865 /locus_tag="PA4016" /db_xref="GeneID:878986" CDS 4495126..4496865 /locus_tag="PA4016" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252705.1" /db_xref="GeneID:878986" /translation="MLRPARSLSLCSALVILLAACGEGEPLLPADARLPDGARYRGEL VDGRLEGQGRLDYDNGAWYAGRFEHGLLHGHGTWQGADGSRYSGGFAAGLFDGQGRLA MADGSVYQGGFRQGLFDGEGSLEQQGTRYRGGFRKGLYSGQGTLDGSDGSRYQGSFRQ GRLEGEGSFSDSQGNQYAGTFRDGQLNGKGRWSGPDGDRYVGQFKDNQFHGQGRYESA SGDVWIGRFSEGALNGPGELLGADGSRYRGGFQFWRFHGQGLLEQLDGTRYEGGFAAG AYAGQGTLDRADGSREQGLWADGKRIRDAAGKALPDTLEVGLLAQGRLLDEELRKIPA STPASELYALSLGGDGRQGVFLREADYAGDLLGQRFAARGVIRLVNHRDHFGDRPLAT RESLSRAVRTLAERSGPEDLVFIYLTSHGSSDHQLALDMPGLNLGDLPAAELAELLAP LRQRDKVLVVSACYSGGFIPPLKDERTLILTAARADRVSFGCSDDADFTYFGRALLAN ALNRTDDLSKAFELAKEEVRQREKEEGFEASEPQAWLPERVLAHWRTLRGQQAERALA SREGKTGEGAAGK" misc_feature 4495216..4496019 /locus_tag="PA4016" /note="Uncharacterized conserved protein [Function unknown]; Region: COG4642" /db_xref="CDD:443680" misc_feature 4496146..4496766 /locus_tag="PA4016" /note="Peptidase C13 family; Region: Peptidase_C13; pfam01650" /db_xref="CDD:396290" gene 4496912..4497553 /locus_tag="PA4017" /db_xref="GeneID:878987" CDS 4496912..4497553 /locus_tag="PA4017" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252706.1" /db_xref="GeneID:878987" /translation="MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE HPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRAL EMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFR LAEILAAPIARILPGKYHGIEACDLARALWRLALEEGKGVRFVESDELRKLGK" misc_feature 4496927..4497535 /locus_tag="PA4017" /note="CC3(TIP30)-like, atypical (a) SDRs; Region: CC3_like_SDR_a; cd05250" /db_xref="CDD:187560" misc_feature order(4496945..4496947,4496951..4496962,4497026..4497031, 4497074..4497076,4497125..4497136,4497176..4497178, 4497188..4497190,4497245..4497253,4497284..4497286, 4497296..4497298,4497356..4497367) /locus_tag="PA4017" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:187560" misc_feature order(4497179..4497181,4497251..4497253,4497284..4497286, 4497296..4497298) /locus_tag="PA4017" /note="active site" /db_xref="CDD:187560" gene complement(4497573..4497848) /locus_tag="PA4018" /db_xref="GeneID:878991" CDS complement(4497573..4497848) /locus_tag="PA4018" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252707.1" /db_xref="GeneID:878991" /translation="MLLLVLAVQMSGCATVRTLDAAKPGAPVVYAGTRLDWYSLHGGC CPMERFGAEAPAHPGLDLPGSALLDTLLLPFSLATAIGLNLGVSGGM" misc_feature complement(4497603..4497848) /locus_tag="PA4018" /note="Protein of unknown function (DUF1375); Region: DUF1375; cl11456" /db_xref="CDD:472188" gene complement(4497850..4498479) /locus_tag="PA4019" /db_xref="GeneID:878992" CDS complement(4497850..4498479) /locus_tag="PA4019" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aromatic acid decarboxylase" /protein_id="NP_252708.1" /db_xref="GeneID:878992" /translation="MSGPERITLAMTGASGAQYGLRLLDCLVQEEREVHFLISKAAQL VMATETDVALPAKPQAMQAFLTEYCGAAAGQIRVFGQNDWMAPPASGSSAPNAMVICP CSTGTLSAVATGACNNLIERAADVALKERRPLVLVPREAPFSSIHLENMLKLSNLGAV ILPAAPGFYHQPQSVEDLVDFVVARILNTLGIPQDMLPRWGEQHLVSDE" misc_feature complement(4497868..4498476) /locus_tag="PA4019" /note="aromatic acid decarboxylase; Validated; Region: PRK05920" /db_xref="CDD:180312" gene complement(4498488..4499843) /gene="mpl" /locus_tag="PA4020" /db_xref="GeneID:879000" CDS complement(4498488..4499843) /gene="mpl" /locus_tag="PA4020" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase" /protein_id="NP_252709.1" /db_xref="GeneID:879000" /translation="MHIHVLGICGTFMGSLAVLAKELGHRVTGSDANVYPPMSTQLQA QGIELMQGYDPAHLEPAPDLVVIGNALSRGNPAVEHVLNKGLPYVSGPQWLADHVLQG RWVLAVAGTHGKTTTTSMLAWVLEHAGMSPGFLIGGVPQNFGVSARLGGTPFFVVEAD EYDSAFFDKRSKFVHYRPRTAILNNLEFDHADIFPDLAAIERQFHHLVRTVPGEGLII RPSAEKALERVLGMGCWTPVQTTGEGGQWQARLLAEDGSRFEVLFDGIVQGEVDWPLT GLHNVANALASLAAARHVGVMPSQGAAALSEFRNVKRRMEKVAEVRGVTLYDDFAHHP TAIATTLDGLRKQVGADTQVIAIVEPRSNSMKLGAHRDGLPDSVRQADQVLWYAPPNL GWDLAATAAQCAIPSQVCDTLEAIIEQVRQQARPGAQVVIMSNGGFGGLHGKLAAALA E" misc_feature complement(4498494..4499840) /gene="mpl" /locus_tag="PA4020" /note="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Region: mpl; TIGR01081" /db_xref="CDD:130153" gene complement(4500001..4501932) /locus_tag="PA4021" /db_xref="GeneID:879001" CDS complement(4500001..4501932) /locus_tag="PA4021" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252710.1" /db_xref="GeneID:879001" /translation="MPASSMSRHARQVLTVAQGKIPPGGPATDPSIARSWLRCLEQHH LDPGQPMAPMVLEHARMLERRERLQQVLEIADGEMHSLYQQLSGNDHAVLLTDARGVI LNCVNADAQRQTFEHAGLWLGADWSEPCEGTNGIGTCVVERQALTIQQEEHFRSRHTG LTCSASPVFDPQGELMAVLDVSSARQEVSRQSQFHTMALVNLSAKIIEGCYFLRRFEG SWLLRFHVQGDYVGLFSEGLLAFEEDGRIRAVNQSALNLLGCPRQRLLGQPVETFFDC RLDDLLGRASQQPSASWPLRTREGRTLYAMLRGAPRAIPQALAVPTAAKPAPAAPGLC LGDAELAADFRRALKVYARDVPLLLNGETGSGKEAFAKAVHLAGPRAEQAFVALNCAA IPETLIESELFGYRGGSFTGARKEGMRGKLQQADGGTLFLDEIGDMPLALQTRLLRVL EERRVVPLGGEPEDVDVRLISATHRDLAGLVADGRFREDLYYRLNGMVVSLPPLRERS DREELLDYLLAEEARGQRIQLDGEVRQGLLAYRWPGNVRQMRTVLRTLVALCEDGRVG LRDLPADIRQALAALPPAAAAPAPAAGNSLDDAERAALLAALDGQRWHVSRVAEQLGI SRNTLYRKLRRHGLVRGQA" misc_feature complement(4500022..4501932) /locus_tag="PA4021" /note="Transcriptional regulator DhaR of acetoin/glycerol metabolism [Transcription]; Region: AcoR; COG3284" /db_xref="CDD:442514" protein_bind 4500311..4500323 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4502271..4503791 /locus_tag="PA4022" /db_xref="GeneID:879017" CDS 4502271..4503791 /locus_tag="PA4022" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase" /protein_id="NP_252711.1" /db_xref="GeneID:879017" /translation="MRYAHPGSEGAIVSFKARYGNYIGGEFVPPVKGQYFTNTSPVNG QPIAEFPRSTAEDIDKALDAAHAAADAWGRTSVQERSNILLKIADRIEQNLELLAVTE TWDNGKAVRETLNADIPLAADHFRYFAGCIRAQEGSAAEINDSTVAYHIHEPLGVVGQ IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLGICVLLELIGDLLPPGVLNVVQG FGREAGEALATSKRIAKIAFTGSTPVGSHILKCAAENIIPSTVELGGKSPNIYFEDIM QAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALVQESIYPAFMEEVLKKVRAIKRGDPL DTETMVGAQASQQQYEKILSYLDIAQQEGAELLAGGSVEKLEGNLASGYYIQPTLLKG HNGMRVFQEEIFGPVVGVTTFKDEAEALAIANDTEYGLGAGLWTRDINRAYRMGRGIK AGRVWTNCYHLYPAHAAFGGYKKSGVGRETHKMMLDHYQQTKNLLVSYDINPLGFF" misc_feature 4502325..4503764 /locus_tag="PA4022" /note="Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like; Region: ALDH_ACDHII_AcoD-like; cd07559" /db_xref="CDD:143471" misc_feature order(4502751..4502765,4502787..4502789,4502832..4502834, 4502838..4502843,4502982..4502993,4503000..4503002, 4503009..4503014,4503054..4503062,4503171..4503173, 4503474..4503476,4503480..4503482,4503558..4503560, 4503672..4503674) /locus_tag="PA4022" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:143471" misc_feature order(4502763..4502765,4503054..4503056,4503162..4503164, 4503171..4503173) /locus_tag="PA4022" /note="catalytic residues [active]" /db_xref="CDD:143471" gene 4504001..4505449 /locus_tag="PA4023" /db_xref="GeneID:879018" CDS 4504001..4505449 /locus_tag="PA4023" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_252712.1" /db_xref="GeneID:879018" /translation="MSLEQTGHAPATSGIDFESVDADYFQHRQLKKGAAGWVLLVGLG VAYVISGDYAGWNFGLAQGGWGGMFLATLLMATMYLCMCFSLAELSSMIPTAGGGYGF ARSAFGPWGGFLTGTAILIEYAIAPAAIACFIGAYCESLFGVGGWLIYLVFYIVFIGI HILGAGEALKLMFVITAVAAIALGVFIVAMVPHFDSANLFNIPQTAATGASSFLPFGY VGVWAAIPYAIWFFLAVEGVPLAAEETKNPKRDLPRGLIGAMLVLLAFAALILVVGPG AAGAKELMGSGNPLVEALESAYKGSTWMSQFVNLVGLAGLIASFFSIIYAYSRQIFAL SRAGYLPRSLSLTNRKKAPVLALVVPGVIGFGLSLTGQGDLLILVAVFGATISYVLMM AAHITLRIRRPDMQRPYRTPGGILTSGVALALACVAVVAGFLVDPRVVVGAVAIYAVL IGYFALYSRHHLVSGTPEEEFAAIQAAEQDLR" misc_feature 4504076..4505410 /locus_tag="PA4023" /note="ethanolamine permease; Region: 2A0305; TIGR00908" /db_xref="CDD:129986" gene 4505508..4506902 /gene="eutB" /locus_tag="PA4024" /db_xref="GeneID:879002" CDS 4505508..4506902 /gene="eutB" /locus_tag="PA4024" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ethanolamine ammonia-lyase large subunit" /protein_id="NP_252713.1" /db_xref="GeneID:879002" /translation="MARFTHSVGGETYRFDSLKDVMAKASPARSGDFLAGVAASNDGE RVAAQMALADIPLKHFLDEALIPYEDDEVTRLIIDTHQRDAFAPVSHLTVGGFRDWLL GDAADEASLRALAPGLTPEMAAAVSKIMRVQDLVLVAQKIRVVTRFRNTLGLRGRLST RLQPNHPTDDPAGIAASILDGLLFGNGDAMLGINPATDSMASICALLEMLDAIIQRYE IPTQACVLTHVTSSIEAINRGVPLDLVFQSIAGTEAANASFGISLKILQEGYEAGLSQ KRGTLGNNLMYFETGQGSALSANAHHGVDQQTCETRAYAVARHFKPFLVNTVVGFIGP EYLYNGKQIIRAGLEDHFCGKLLGVPMGCDICYTNHAEADQDDMDMLLTLLGVAGINF IMGIPGSDDVMLNYQTTSFHDALYARQTLGLKPAPEFEDWLQRMGIFTQADGRIRFGD ELPPAFRQALAQLA" misc_feature 4505514..4506896 /gene="eutB" /locus_tag="PA4024" /note="Ethanolamine ammonia-lyase, large subunit [Amino acid transport and metabolism]; Region: EutB; COG4303" /db_xref="CDD:443444" gene 4506913..4507734 /locus_tag="PA4025" /db_xref="GeneID:879003" CDS 4506913..4507734 /locus_tag="PA4025" /EC_number="4.3.1.7" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ethanolamine ammonia-lyase small subunit" /protein_id="NP_252714.1" /db_xref="GeneID:879003" /translation="MNDKHLPDASAENPWLPLRQLTPARIALGRTGTSLPTRPQLDFQ YAHAQARDAVHLPFDHAAISDGLRQRGRDSLLLHSAAADRHVYLQRPDLGRRLDEASV QRLREHAAGYDGQIDLAIVVADGLSALAVQRHTLPFLERLEEQALAEGWSLSPVVLVE QGRVAVADEIGELLRAKMSVILIGERPGLSSPDSLGLYFTWAPRVGLTDAYRNCISNV RLEGLSYGMAAHRLLYLMREACRRQLSGVNLKDEAEVQALDGEAPRTGNFLLARD" misc_feature 4506931..4507710 /locus_tag="PA4025" /note="ethanolamine ammonia-lyase subunit EutC; Region: PRK05465" /db_xref="CDD:235482" gene 4507897..4508358 /locus_tag="PA4026" /db_xref="GeneID:879006" CDS 4507897..4508358 /locus_tag="PA4026" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_252715.1" /db_xref="GeneID:879006" /translation="MRIVQATLEHLDLLAPLFVKYREFYGMLSYPESSRKFLEKRLRR KESVIYLALADEEDRLLGFCQLYPSFSSLSLKRVWILNDIYVAEEARRQLVADHLLQH AKQMARETHAVRMRVSTSVDNEVAQKVYESIGFREDQEFKNYTLPISDELS" misc_feature 4507897..4508325 /locus_tag="PA4026" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" gene 4508408..4509301 /locus_tag="PA4027" /db_xref="GeneID:879007" CDS 4508408..4509301 /locus_tag="PA4027" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252716.1" /db_xref="GeneID:879007" /translation="MGSRTWHWPGVLLGLLLATAGAQADTLRVATLDWAPYVGPDLPG KGLASRILDEALALDGHRAELVFLPWQRALKEAAEGRFDALMPAYLSPERRELFHATI PLLDSQLGFFRQRERLLPVNPAHLESLRPYRIGVVRGYVNREDFDADRSLTKDAVTND WQNLEKLLRGRIDLAVVDRYTGYHLLARNVPALKDRLVFIEPPLEVKPLYVLVPKRHA RGAALAASLDRNLRLMRRSGRLEQLIAEAHLERSGQTRTLAVDPLTGQADQQRSPGQE QDQGQHAPLQPAWREDPLGMR" misc_feature 4508486..4509157 /locus_tag="PA4027" /note="ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:440596" gene complement(4509194..4510777) /locus_tag="PA4027a" /db_xref="GeneID:17373380" CDS complement(4509194..4510777) /locus_tag="PA4027a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719774.1" /db_xref="GeneID:17373380" /translation="MTLQPFAQPPLSLALGAGRDLPGQAARVRAEWLAPRPGRAPAFL LALLWGRGCANVVQAIEGHLDALFADYACTPEGWPEAQAARQVLASLNMQLYRRRREG EPGVLELAAGLLLVHAGGVHFLQCGAVGLLRYRQGSLQRLGGSGQPLGSSAELALVQH NLTQVAGEPLLLAPQPLLEVADLRALGERCAGLATGRLEGVLQPLLHAPGAVALVLPG ALERAPAAPRHTGWPALGAACPGDCVDGWTLQAACAFGPPGRLFRACDEQGREALLLL AAVDADEAFWQREWALRRCRAESLPRVLSSPRLRRHAFQLFAPPRWPMRSLLDWAPAH LPLEPQCALVLLEQLIDAVRALQRRGVQGLWLAPRQILLDEGGRLLFLPEAAAILPGV ARQALPADSVPLAPELRRGEALDGRADQFALAALFYWLLCGRWPSIACPESDGGCRYE PLGERQADLPVGWDGVLARALAPRPEGRFEALSEFWLALQKPLAHPQRVFAPRRLQRG VLALVLLLAGAALLVGLAG" misc_feature complement(4509323..>4509805) /locus_tag="PA4027a" /note="The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases; Region: Protein Kinases, catalytic domain; cl21453" /db_xref="CDD:473864" gene 4510971..4511636 /locus_tag="PA4029" /db_xref="GeneID:879039" CDS 4510971..4511636 /locus_tag="PA4029" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252718.1" /db_xref="GeneID:879039" /translation="MDFNPIDLILHLDTYLAMLVSNYGVWIYAILFLVIFCETGLVVT PFLPGDSLLFIAGAICATGGMDPWLLGGLLMVAAITGDSTNYVIGRTLGKRLFSNPDS KVFRRDYLDRTHEFYERHGGKTVTLARFLPIVRTFAPFVAGMAKMHYPRFVMFSVVGT VAWVGGLVTLGYFFGNVPFIKKNLSLLVIGIILLSLLPMILGFIRHRLQASAAKQAKA QSD" misc_feature 4510986..4511591 /locus_tag="PA4029" /note="SNARE associated Golgi protein; Region: SNARE_assoc; cl00429" /db_xref="CDD:469768" gene 4511639..4512469 /locus_tag="PA4030" /db_xref="GeneID:879024" CDS 4511639..4512469 /locus_tag="PA4030" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252719.1" /db_xref="GeneID:879024" /translation="MWSFRAWRRRRLLARHPVAEELWQRVRRHLPILDGLDADEDRRL RERAVLFLADKHLTALAGVDLDDFGRLLLAAQAQLPLLHLPELNWYQGFHELVLYPDD FVSPQKHRDASGVVHEFDDERSGETSLQGPVVLAWPGVVGGGGWDAYNLVIHELAHKL DMLNGDANGLPPLHAGMRIGDWASAMQAAYDEMNALLDRDPDAQTAIDPYAAEDPAEF FAVTSEYFFTAPDLLHEAYPAVYRQLQLFYRQDPLQRLRRLQAEHPDYREAAGDTTNG " misc_feature 4511639..4512400 /locus_tag="PA4030" /note="Mlc titration factor MtfA, regulates ptsG expression [Signal transduction mechanisms]; Region: MtfA; COG3228" /db_xref="CDD:442461" gene 4512549..4513076 /gene="ppa" /locus_tag="PA4031" /db_xref="GeneID:879025" CDS 4512549..4513076 /gene="ppa" /locus_tag="PA4031" /EC_number="3.6.1.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="inorganic pyrophosphatase" /protein_id="NP_252720.1" /db_xref="GeneID:879025" /translation="MSYSKIPAGKDLPNDIYVAIEIPANHAPIKYEIDKDTDCLFVDR FMATPMFYPANYGFIPNTLADDGDPLDVLVVTPYPVAPGSVIRARPVGVLHMTDEAGG DAKLIAVPHDKLSVLYKDVKEYTDLPALLLEQIKHFFENYKDLEKGKWVKVEGWGNAD AARAEITKAVAAFQK" misc_feature 4512549..4513073 /gene="ppa" /locus_tag="PA4031" /note="inorganic diphosphatase; Region: PRK01250" /db_xref="CDD:179262" misc_feature order(4512618..4512623,4512780..4512785) /gene="ppa" /locus_tag="PA4031" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238239" misc_feature order(4512636..4512638,4512678..4512680,4512714..4512716, 4512972..4512977) /gene="ppa" /locus_tag="PA4031" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238239" misc_feature order(4512642..4512644,4512744..4512746,4512759..4512761, 4512840..4512842,4512855..4512857) /gene="ppa" /locus_tag="PA4031" /note="metal binding sites [ion binding]; metal-binding site" /db_xref="CDD:238239" gene complement(4513168..4513884) /locus_tag="PA4032" /db_xref="GeneID:879035" CDS complement(4513168..4513884) /locus_tag="PA4032" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_252721.1" /db_xref="GeneID:879035" /translation="MRVAILDDESAELDRVEQTLQQIPAQGEQAWTVHRFARGEDLLK QLKRETFDLLILDWQLPDLSGLQLLRWSREHLDAPPPAIMLTSRDAEQDIVQALNSGA DDYVSKPFRPNELKARVAAVLRRHGGTRPAQHEVQTFNDLSFDDAELTVTRAGAPISL TEREYRLARCLFANLGRPLSREYLYERFWPHEEVLSSRPLDTHIYRLRNKLGLTAERG WQLLTIYGYGYRLESVATVD" misc_feature complement(4513249..4513884) /locus_tag="PA4032" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" protein_bind 4514009..4514021 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4033" /bound_moiety="AmrZ" gene 4514079..4514348 /locus_tag="PA4033" /db_xref="GeneID:879036" CDS 4514079..4514348 /locus_tag="PA4033" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252722.1" /db_xref="GeneID:879036" /translation="MGFRPVSQRLRDINLQALGKFSCLALVLGLESVSHPAGPVQAPS FSQGTASPSFATPLGLDGPARARAEMWNVGLSGAVSVRDELRWVF" gene 4514695..4515384 /gene="aqpZ" /locus_tag="PA4034" /db_xref="GeneID:879049" CDS 4514695..4515384 /gene="aqpZ" /locus_tag="PA4034" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aquaporin Z" /protein_id="NP_252723.1" /db_xref="GeneID:879049" /translation="MKQYGAEFFGTFWLVLGGCGSAVLAAGVPELGIGYLGVALAFGL SVLTMAYAIGPISGAHLNPAVSVGLWVGGRFPASQLLPYVVAQVLGGLAAGGVLYLIA SGKAGFDLAAGFASNGYGEHSPGGYSLQAALVSEVVLTGMFLLIILGATSKRAPQGFA PIAIGLTLTLIHLISIPVTNTSVNPARSTAVALYVGDWAVSQLWLFWVAPILGAVLGA LAYRLIGDKND" misc_feature 4514695..4515381 /gene="aqpZ" /locus_tag="PA4034" /note="aquaporin Z; Provisional; Region: PRK05420" /db_xref="CDD:235453" misc_feature order(4514818..4514820,4514872..4514880,4515232..4515237, 4515244..4515246,4515253..4515255) /gene="aqpZ" /locus_tag="PA4034" /note="amphipathic channel [active]" /db_xref="CDD:238204" misc_feature order(4514878..4514886,4515244..4515252) /gene="aqpZ" /locus_tag="PA4034" /note="Asn-Pro-Ala signature motifs; other site" /db_xref="CDD:238204" gene 4515550..4516551 /locus_tag="PA4035" /db_xref="GeneID:879050" CDS 4515550..4516551 /locus_tag="PA4035" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252724.1" /db_xref="GeneID:879050" /translation="MTALALTSRSLFPACAALALGGLLTLLAGSVAAAPAKTKRPPFI EQGETCLPQPLPASVLYLAGDAWKLDAKGNQTPLEEGMDIDELEGVKTSPTAFVSLLL GDGSRIVLPSSSEVTLHLDEDTGIPQIALRAGQVESYVLKRKSDHDRFQVLTPVGVLG VRGTHFRARTEDGQALTEVLDGRVAVNRELTSDDLPLNGRRPARKAAQAEPDEDVLVD ARRGLKVKPQGKLTPVDLLPAPQLRGQGGEHGESPVWKLYLAPLHGAKRYRAQVASDP DFLRIQQERFSSTPEVSFSGLKAAFYHVRLSAFDNDGLEGETSVYDILYYPRGGSAR" misc_feature 4515703..4516275 /locus_tag="PA4035" /note="Uncharacterized peptidoglycan binding protein, contains LysM and FecR domains [General function prediction only]; Region: COG4254" /db_xref="CDD:443396" gene 4516570..4518870 /locus_tag="PA4036" /db_xref="GeneID:879031" CDS 4516570..4518870 /locus_tag="PA4036" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_252725.1" /db_xref="GeneID:879031" /translation="MKALDRQDEPSQAQRLFRGLVREWLLVSLLLLPLTALLSLSSGL PLNNLLYDRLRNLAPLAVDPRILVVAIDDRSLESLGRWPWPRSVHAELLDRLAAAGAR SVLLDVIFSEPSSNPDSDRQLARSLCRAGNVLLPLLRESVPRYGEPPREIPPTAPLAG CAAGIGHINVEADSDGTVRSVYLREGPLGQPRPLLAWQAFADAGAMPMPGLDDMRNLP GWQRDHAIRIPFIGADAGFPSVPYVSVLRGEVPDSLLRDRLVLVGATAPGLGDRYVTP LSASLGTTPGVEIQANILNGLLQQRTAVDLQPWLAALLSAASVALLLGLMLFRSRHAL LLTLACAALALGLSWALLLNGWWWSPLASLVGLLLAYLIWSWRRLNAVLAYFGWELAR LDREPKVLPERASPPRAGNDPLQNRIAALEQAVSRTRDSRRFMADGLEGLPVATLICD PQGQILLANRKARDLFGGELRGAELRQRLAELGHPSLAGGARPTLETLEAIEFRDHRE RDLRLDLARLLPVESETAIGWLVSLIDLSAERDAERQRATLLRFLSHDLRAPHSAILA LLDVRPAEDEAGQQVYRQIEQQVRRALGLTDAFVQLAKAESDAYRFEACMFTMLAMDA ADQLWPLAQQKDIDLRRDWDDEQEPMVWADPGLLTRALFNLLENAVKYSPAGTVVSLS IRLEGDWLSCRIVDQGKGIAAAELPRLFSQYQRFASAEGSAGLGLGLAMVKTVIDRHG GRIGCQSQVGQGTTFEIRLPLLKGEE" misc_feature 4516711..>4517871 /locus_tag="PA4036" /note="Extracytoplasmic sensor domain CHASE2 (specificity unknown) [Signal transduction mechanisms]; Region: CHASE2; COG4252" /db_xref="CDD:443394" misc_feature 4517884..4518192 /locus_tag="PA4036" /note="PAS fold; Region: PAS_4; pfam08448" /db_xref="CDD:312075" misc_feature 4517884..>4518015 /locus_tag="PA4036" /note="PAS domain; Region: PAS_8; pfam13188" /db_xref="CDD:463802" misc_feature 4518175..4518852 /locus_tag="PA4036" /note="K+-sensing histidine kinase KdpD [Signal transduction mechanisms]; Region: KdpD; COG2205" /db_xref="CDD:441807" gene 4519275..4520201 /locus_tag="PA4037" /db_xref="GeneID:879032" CDS 4519275..4520201 /locus_tag="PA4037" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_252726.1" /db_xref="GeneID:879032" /translation="MIDIDRLSKRFSGRTVVNDLSFRIDRGEIVGLLGPNGAGKSTTL KMLSGFLAPSAGSVRIFGFDMQDKARQAQKLIGYLPENAPSYGEMTVEGFLAFVASIR DYSGREKRRRIDSAMDCMELRDERRSIIETLSKGFKRRVALAQAILHDPELLLLDEPT DGLDPNQKHQVRQLVKNLSESKIVVISTHILEEVSFMCSRALVINGGRLLADNTPGEL RTRSRYHHAVSLSIEAPVDPLAIAMLPGVAGIEGRPDRAGTLTILARPGAQILPALNR LIHGSGWRVSGVRTEHGQLEEVFRQLTREPPA" misc_feature 4519278..4519937 /locus_tag="PA4037" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" gene 4520198..4520932 /locus_tag="PA4038" /db_xref="GeneID:879051" CDS 4520198..4520932 /locus_tag="PA4038" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252727.1" /db_xref="GeneID:879051" /translation="MTAIGTIFRRELGSYFATPLAYVFTLVFLVLSGVATFYLGDFFE RGQADLAPFFSSLPWLYLLLIPALAMRLWAEERKSGSIEMLMTLPVSRATLVTGKFLA AWFCAGLALLLTFPMPLTVNYLGSPDNGAIIAGYLAGWLLSGGYLAIGSCMSALAKNQ IIAFALTVLVCLLFVGAGTPHVQQALSGWLPQWLLDGIASLSVLVRFEALGRGVLDVR DLAYFCSLIVAWLVATTIVIDLKKAA" misc_feature 4520213..4520914 /locus_tag="PA4038" /note="ABC-2 type transporter; Region: ABC2_membrane; cl21474" /db_xref="CDD:473876" gene 4520942..4522744 /locus_tag="PA4039" /db_xref="GeneID:879052" CDS 4520942..4522744 /locus_tag="PA4039" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252728.1" /db_xref="GeneID:879052" /translation="MKRTLYSGVGLLLVGLLFLAFNLLSSLLLRDQQFDLTQQKLYTF SAGTQEVLDSLDEPLNLYLFFSKSRASDLPALRNYARRVEEVLDLYARRSHGNVRLFV IDPLPFSDDEDRAARFGLQAPPIGPNGEAIYFGLAATNPTDGLQVIPFFSPEEEPLLE YDLSRLVQALAQRERTVVGLMSSLPMTGQAPTDGQPGSRPWAMMDKLYQQFDIRTLGL ASTEIPAEVSVLMLVHPRQLSEQTQYAIDQFVLRGGKLLAFVDPLSLADADGGKSSDL APLLRSWGVQLRPDTLLADASFAMIKPNAERRPERNPTWLHLPGDTFPHDNVLTTGLE SLNLASVGLLEPLGGASTRFIPLLHSSAHSMPLSLERFRQSSTEQLNATLVPTGERYV LAAKVEGPATSAFPADRGKQGEGLSDSANIHVLLVADTDLLSNPLWLQEQPGHNEPQV WADNDLFVGNALDYLSGSDALIDLRSRGHTKRPFTRVEALRREAGLRAQEQLNALQQS LNDTDRNLRTLQQSMDAGDQEVTPEMEATLRRFIDDKLRIRQQLRQLQFQLNADVERL GEQVKLANTVLLPALLTLFLLLHWSWRSMRRRRG" misc_feature 4520999..4522408 /locus_tag="PA4039" /note="ABC-type uncharacterized transport system involved in gliding motility, auxiliary component [Cell motility]; Region: GldG; COG3225" /db_xref="CDD:442458" gene 4522746..4523753 /locus_tag="PA4040" /db_xref="GeneID:879061" CDS 4522746..4523753 /locus_tag="PA4040" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252729.1" /db_xref="GeneID:879061" /translation="MRLRNVAGLALALALFAGILGWLHERQQPPAQPPASRAWLPGLK PHQVTALCIATPGQPTIRARRDGKDWMLASKDGYPASGETIRQLLRSLADARLLEEKS ASPENRERMGLSDQGKGQASRITLERGDAPPLVLLLGKRTSQGGQLVRQADDEGAWLI DRTVGLPVNDLALLDPRLTDLPFEQLRELTLSYGNGVRLNISRASEKDDGIRLRQFPS RPQLMGEAEAEQAARLFAALRLLEVAPAKASRQKPLLTFTLKSFAGGTLQGQLLELER QYWLQLTDSKGFADGQVSAVKGWRYRVEGLSPDTAPAPQPPKASPVKQSKPAKPSSPK C" misc_feature 4522953..4523504 /locus_tag="PA4040" /note="Domain of unknown function (DUF4340); Region: DUF4340; pfam14238" /db_xref="CDD:433800" gene complement(4523985..4525154) /locus_tag="PA4041" /db_xref="GeneID:879062" CDS complement(4523985..4525154) /locus_tag="PA4041" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252730.1" /db_xref="GeneID:879062" /translation="MRIQEVRERSIPLSRYAGVAAATGGLSTSLVAVLTDIVRDGRRV VGYGHASVGRYAQGGLIRERFAPRLLGAPADSLASDDGSGIDPLRAWDLMMRDEKPGG HGERCVAVGALDMALWDAAAKAAGLPLHRFLARRLGLAEDYPQRVPVYAGGGYPYPHD DLGRLEEELRRFVDLGYTHAKIKIGAAGLDQDRRRIDRALRVLGDASRLAVDAMNRYD AEGAVDAAKALAPLGLWWFEDICDPHDFPTQAEVADIYPGPIGAGEALFSLAEARLLD LYGGVRRERDVLVFDPVHCYGLPGYLAILDHLCARGWPRAAFRPHAGYLFSLHLVAAL RLGWAEATPSAFRPFDDFAGALPFSSGLAGLPQSPGIGFERQATLAGLFRKLLEA" misc_feature complement(4523997..4525151) /locus_tag="PA4041" /note="Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 1. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic...; Region: MR_like_1; cd03326" /db_xref="CDD:239442" misc_feature complement(order(4524135..4524137,4524192..4524194, 4524282..4524284,4524363..4524365,4524441..4524443, 4524447..4524449,4524519..4524521,4524606..4524608, 4524612..4524614,4524705..4524707)) /locus_tag="PA4041" /note="putative active site pocket [active]" /db_xref="CDD:239442" misc_feature complement(order(4524363..4524365,4524441..4524443, 4524519..4524521)) /locus_tag="PA4041" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:239442" gene 4525312..4525554 /gene="xseB" /locus_tag="PA4042" /db_xref="GeneID:879057" CDS 4525312..4525554 /gene="xseB" /locus_tag="PA4042" /EC_number="3.1.11.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease VII small subunit" /protein_id="NP_252731.1" /db_xref="GeneID:879057" /translation="MARKKTLDFEQSLTELQTLVERLESGELSLEESLGAFEQGIRLT RECQTSLSQAEQKVQILLERDGELSEAPFDAEGDEA" misc_feature 4525312..4525539 /gene="xseB" /locus_tag="PA4042" /note="exodeoxyribonuclease VII small subunit; Provisional; Region: PRK00977" /db_xref="CDD:179195" gene 4525551..4526438 /gene="ispA" /locus_tag="PA4043" /db_xref="GeneID:879058" CDS 4525551..4526438 /gene="ispA" /locus_tag="PA4043" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="geranyltranstransferase" /protein_id="NP_252732.1" /db_xref="GeneID:879058" /translation="MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGK RVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHR AFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAID LGSVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAF QVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGF PPSADPLRQLARYIVERRN" misc_feature 4525554..4526435 /gene="ispA" /locus_tag="PA4043" /note="Geranylgeranyl pyrophosphate synthase [Coenzyme transport and metabolism]; Region: IspA; COG0142" /db_xref="CDD:439912" gene 4526547..4528430 /gene="dxs" /locus_tag="PA4044" /db_xref="GeneID:879037" CDS 4526547..4528430 /gene="dxs" /locus_tag="PA4044" /EC_number="2.2.1.7" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="1-deoxy-D-xylulose-5-phosphate synthase" /protein_id="NP_252733.1" /db_xref="GeneID:879037" /translation="MPKTLHEIPRERPATPLLDRASSPAELRRLGEADLETLADELRQ YLLYTVGQTGGHFGAGLGVVELTIALHYVFDTPDDRLVWDVGHQAYPHKILTERRELM GTLRQKNGLAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQGKERKSVAVIGDG ALTAGMAFEALNHASEVDADMLVILNDNDMSISHNVGGLSNYLAKILSSRTYSSMREG SKKVLSRLPGAWEIARRTEEYAKGMLVPGTLFEELGWNYIGPIDGHDLPTLVATLRNM RDMKGPQFLHVVTKKGKGFAPAELDPIGYHAITKLEAPGSAPKKTGGPKYSSVFGQWL CDMAAQDARLLGITPAMKEGSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKP VVAIYSTFLQRAYDQLIHDVAVQHLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPG MLVMTPSDEDELRKLLTTGYLFDGPAAVRYPRGSGPNHPIDPDLQPVEIGKGVVRRRG GRVALLVFGVQLAEAMKVAESLDATVVDMRFVKPLDEALVRELAGSHELLVTIEENAV MGGAGSAVGEFLASEGLEVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAVRQRL DRQ" misc_feature 4526589..4528418 /gene="dxs" /locus_tag="PA4044" /note="Deoxyxylulose-5-phosphate synthase [Coenzyme transport and metabolism, Lipid transport and metabolism]; Region: Dxs; COG1154" /db_xref="CDD:440768" gene complement(4528782..4529579) /locus_tag="PA4045" /db_xref="GeneID:879075" CDS complement(4528782..4529579) /locus_tag="PA4045" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252734.1" /db_xref="GeneID:879075" /translation="MRSFWLLACLLLSLSAGAAQRVVSLAPSLTDSVLELGAARRLVG VLDGGERPAAIGDLPSVGRYGQVNLERLLELQPDLILVWPGSVPEAQLQRLRDFGIAL FIAEPHSLDELALQLAALGEALGEAEAGQRLSARFREGMRRLAERYRRDKPLKVFYQV WDRPLYTIGGRQVISDALRVCGAENLFGDLPQPAPQVSVEAVLARDPAVIVAGSHAQL ELWRQWPALAATRRGQLYRIEDKNLERPSFAMLAATEKLCRSLAGAR" misc_feature complement(4528803..4529522) /locus_tag="PA4045" /note="Cobalamin binding protein BtuF. These proteins have been shown to function as initial receptors in ABC transport of vitamin B12 (cobalamin) in eubacterial and some archaeal species. They belong to the TroA superfamily of helical backbone metal receptor...; Region: BtuF; cd01144" /db_xref="CDD:238564" misc_feature complement(order(4528998..4529000,4529082..4529084, 4529325..4529327,4529331..4529333,4529436..4529438, 4529496..4529501)) /locus_tag="PA4045" /note="cobalamin binding residues [chemical binding]; other site" /db_xref="CDD:238564" misc_feature complement(order(4528980..4528982,4529370..4529372)) /locus_tag="PA4045" /note="putative BtuC binding residues [active]" /db_xref="CDD:238564" misc_feature complement(order(4529223..4529228,4529235..4529237, 4529244..4529249,4529253..4529255,4529262..4529264, 4529274..4529276,4529292..4529294,4529301..4529303, 4529328..4529330)) /locus_tag="PA4045" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238564" gene complement(4529579..4529998) /locus_tag="PA4046" /db_xref="GeneID:879076" CDS complement(4529579..4529998) /locus_tag="PA4046" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252735.1" /db_xref="GeneID:879076" /translation="MSRQQARGALGRAWWLQLALALLPLILVEFFLGELQPLPHGLAM PLFIAALLSMFVNLPLFGAYKRGLIATQKALDTAEEAAAWTRLAQVRRKALFGASLPA WIGVPGVFAGLNGVALILLGVTSLVLFWLYRIPRQLG" gene complement(4529995..4530612) /gene="ribA" /locus_tag="PA4047" /db_xref="GeneID:879059" CDS complement(4529995..4530612) /gene="ribA" /locus_tag="PA4047" /EC_number="3.5.4.25" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase II" /protein_id="NP_252736.1" /db_xref="GeneID:879059" /translation="MSVVFVAASKLPTPFGEFTMHGFLDEESGKEHVALSMGDIADGA PVLGRLHSECLTGDALFSLRCDCGFQLEGALAAIAEEGRGVLLYLRQEGRGIGLLNKI RAYELQDGGADTVEANLQLGFGADQRDYAMCQPMLAHLGVSSLRLMTNNPRKVKALES YAITVAERVPLQKGLNKHNRRYLATKAGKLGHMLGSLHQGEAETT" misc_feature complement(4530025..4530612) /gene="ribA" /locus_tag="PA4047" /note="GTP cyclohydrolase II RibA; Region: ribA; PRK00393" /db_xref="CDD:234745" misc_feature complement(order(4530286..4530288,4530295..4530300, 4530304..4530309,4530316..4530321,4530343..4530345, 4530349..4530351,4530388..4530390,4530397..4530402, 4530421..4530423,4530427..4530441,4530445..4530450, 4530454..4530456,4530508..4530510,4530514..4530516, 4530520..4530522,4530541..4530549,4530553..4530555, 4530577..4530597)) /gene="ribA" /locus_tag="PA4047" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:238348" misc_feature complement(order(4530151..4530153,4530160..4530168, 4530229..4530231,4530235..4530237,4530271..4530273, 4530289..4530291,4530298..4530300,4530310..4530312, 4530331..4530342,4530403..4530405,4530412..4530414, 4530418..4530420,4530445..4530447,4530451..4530468)) /gene="ribA" /locus_tag="PA4047" /note="active site" /db_xref="CDD:238348" gene complement(4530743..4531387) /locus_tag="PA4048" /db_xref="GeneID:879060" CDS complement(4530743..4531387) /locus_tag="PA4048" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252737.1" /db_xref="GeneID:879060" /translation="MLRLCVALFSSVLALSSLAAPQVFVVGLFPGAAVLNVDGQRKLV RVGQTGPQGVQVVSADSRKAVLRIDGVERTYELSREYNEAGYSAPQRQSFSIARGTGG HYWVAGSVNGQNMQFLVDTGATSIAMNENEARRLGIDYRVDGKPMVASTASGTSRGWR VTLDRVKIGGIELLGVEAAVIEGGYPTEALLGMSFLNRVRWREEQGMLLIEAKH" misc_feature complement(4530752..4531111) /locus_tag="PA4048" /note="clan AA aspartic protease, TIGR02281 family; Region: clan_AA_DTGA" /db_xref="CDD:131334" misc_feature complement(4531022..4531030) /locus_tag="PA4048" /note="catalytic motif [active]" /db_xref="CDD:133150" misc_feature complement(4531028..4531030) /locus_tag="PA4048" /note="Catalytic residue [active]" /db_xref="CDD:133150" gene complement(4531390..4532136) /locus_tag="PA4049" /db_xref="GeneID:879073" CDS complement(4531390..4532136) /locus_tag="PA4049" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252738.1" /db_xref="GeneID:879073" /translation="MRLLVLFCCLWLLPGVASAAPSVGEIRVVSETWTRYTQEDGRGV AWDLLRAVYEPAGVRLRIANEPYTRAVGLVLRGEADAWVGAYRGEIDEALYPRWPYDV DPIAVLSLKDNPPPPLEGLSRFRLSWMRGYAFARYFPTLTPHSELQRRTSALPMLLNH RVDYFIDSRPELEEMLAGAGALAAEYRITDVTRLPLYLGFSDSPRGRELLALFDRRMR QLHASGELERIFARWNWPYAPLKAILPPKE" misc_feature complement(4531438..4532031) /locus_tag="PA4049" /note="ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:440596" gene complement(4532145..4532660) /gene="pgpA" /locus_tag="PA4050" /db_xref="GeneID:879074" CDS complement(4532145..4532660) /gene="pgpA" /locus_tag="PA4050" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphatidylglycerophosphatase A" /protein_id="NP_252739.1" /db_xref="GeneID:879074" /translation="MTEHPDQAPAQPVPPSVWRNPWHFLAFGFGSGTLPKAPGTWGSL VAIPFIPLWQMLPDWGYWLMLGVTMLFGSWLCGKVADDLRVHDHEGIVWDEMVGMWIT LWLVPEGWWWLLIGFVVFRIVDILKPWPISWVDRNVHGGVGIMLDDVLAGVFAWLVMQ GLVWGWVHWLV" misc_feature complement(4532169..4532609) /gene="pgpA" /locus_tag="PA4050" /note="Phosphatidylglycerophosphatase A [Lipid transport and metabolism]; Region: PgpA; COG1267" /db_xref="CDD:440878" gene complement(4532653..4533621) /gene="thiL" /locus_tag="PA4051" /db_xref="GeneID:878642" CDS complement(4532653..4533621) /gene="thiL" /locus_tag="PA4051" /EC_number="2.7.4.16" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="thiamine monophosphate kinase" /protein_id="NP_252740.1" /db_xref="GeneID:878642" /translation="MGEFELIRRFFAAAACAAPAADVALGIGDDCALLAPPAGEQLAV STDTLVEGVHFPAGCDPFLLAQRALAVSASDLAAMGAAPLAFTLALTLPQADAEWLQG FARGLDAMARQCGLALVGGDTTRGPLSMTLTVFGRVPAGQALTRAGARPGDLLCVGGP LGEAGAALELVLERRSAPAEVAEPLLARYWTPAPQFGLGLALRGKASAALDISDGLLA DCGHIARASGVALLVECQRLQASAALSGLLAGEEALRQQLAAGDDYVLVFTLPPEYLG EIRAAWPAMAVIGRVEAGQGVHLLDADGKELIPAAAGYQHFGTQRD" misc_feature complement(4532671..4533621) /gene="thiL" /locus_tag="PA4051" /note="thiamine monophosphate kinase; Provisional; Region: PRK05731" /db_xref="CDD:235583" gene complement(4533640..4534119) /gene="nusB" /locus_tag="PA4052" /db_xref="GeneID:878643" CDS complement(4533640..4534119) /gene="nusB" /locus_tag="PA4052" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcription antitermination protein NusB" /protein_id="NP_252741.1" /db_xref="GeneID:878643" /translation="MSNQDSGNPAAKPPKGKTAARRKARSLAVQALYSWQIAGQPLHE IEAQFRTDNDFSEVDGAYFHEILHGVPRQKSELDSTFEPCLDRPLAEIDPVELAILRL STYELRNRIDVPYKVVINEGIELAKTFGATDGHKFVNGVLDKLAPRLRAAELRGGKR" misc_feature complement(4533661..4534065) /gene="nusB" /locus_tag="PA4052" /note="transcription antitermination factor NusB; Region: nusB; PRK00202" /db_xref="CDD:234686" misc_feature complement(order(4534045..4534047,4534057..4534059)) /gene="nusB" /locus_tag="PA4052" /note="putative RNA binding site [nucleotide binding]; other site" /db_xref="CDD:238342" gene complement(4534116..4534592) /gene="ribE" /locus_tag="PA4053" /db_xref="GeneID:879081" CDS complement(4534116..4534592) /gene="ribE" /locus_tag="PA4053" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="6,7-dimethyl-8-ribityllumazine synthase" /protein_id="NP_252742.1" /db_xref="GeneID:879081" /translation="MTLKTIEGTFIAPKGRYALVVGRFNSFVVESLVSGAVDALVRHG VAESEITIIRAPGAFEIPLVTQKVAQQGGFDAIIALGAVIRGGTPHFEYVAGECTKGL AQVSLQFGIPVAFGVLTVDSIEQAIERSGTKAGNKGAEAALSALEMVSLLAQLEAK" misc_feature complement(4534125..4534580) /gene="ribE" /locus_tag="PA4053" /note="6,7-dimethyl-8-ribityllumazine synthase (Riboflavin synthase beta chain) [Coenzyme transport and metabolism]; Region: RibE; COG0054" /db_xref="CDD:439824" gene complement(4534710..4535807) /gene="ribB" /locus_tag="PA4054" /db_xref="GeneID:878914" CDS complement(4534710..4535807) /gene="ribB" /locus_tag="PA4054" /EC_number="4.1.99.12" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3,4-dihydroxy-2-butanone-4-phosphate synthase" /protein_id="NP_252743.1" /db_xref="GeneID:878914" /translation="MALNTIDELIEDIRQGKMVILMDDEDRENEGDLIMAAECVRTED INFMVKHARGLVCMPMTRERCERLGLPLMVQRNGSGFGTKFTVSIEAAEGVTTGISAA DRARTVQAAAAKNAVAADIVSPGHIFPLMAQPGGTLARAGHTEAACDLARMAGFEPSG VICEVMNDDGSMARRPELEAFAAEHGIKIGTIADLIHYRLIHERTVERIAEQPLDSEL GHFNLITYRDSVEGDVHLALTLGKVCAEEPTLVRVHNMDPLRDLLQVNQPGRWSLRAA MTKVAEAGSGVVLLLGHQIGGDDLLAHVREIASAPAPAPKATTTYSTVGAGSQILRDL GVRKMRLLSAPMRFNAISGFDLEVVEYLPAE" misc_feature complement(4534713..4535807) /gene="ribB" /locus_tag="PA4054" /note="bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II; Region: PRK14019" /db_xref="CDD:237587" gene complement(4535834..4536493) /gene="ribC" /locus_tag="PA4055" /db_xref="GeneID:878915" CDS complement(4535834..4536493) /gene="ribC" /locus_tag="PA4055" /EC_number="2.5.1.9" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="riboflavin synthase subunit alpha" /protein_id="NP_252744.1" /db_xref="GeneID:878915" /translation="MFTGIIESIGSVRAMTPKGGDLRVYIATGKLDLGDVKLGDSIAV NGVCLTAVELPGDGFWADVSRESLARTAFQHLKVGSRVNLEKALTPTTRLGGHLVSGH VDGVGEVLKREENARAIQFTVRAPRELARYIAHKGSITVDGTSLTVNAVNGAEFELTI VPHTLSETIMAEYQPGRRVNLEVDLLARYLERLLLGDKAAEPSASGISEAFLAENGFL K" misc_feature complement(4535915..4536493) /gene="ribC" /locus_tag="PA4055" /note="riboflavin synthase; Region: PRK09289" /db_xref="CDD:236455" gene complement(4536921..4538042) /gene="ribD" /locus_tag="PA4056" /db_xref="GeneID:879079" CDS complement(4536921..4538042) /gene="ribD" /locus_tag="PA4056" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="riboflavin-specific deaminase/reductase" /protein_id="NP_252745.1" /db_xref="GeneID:879079" /translation="MNAADPLYMARALELARQGLYSTQPNPRVGCVLVKDGQVVGEGW HVRAGEPHAEVHALRQAGENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAM QDPNPEVAGRGLLRLMQAGIAVQSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLD GRTAMASGESQWITGPSARSAVQRLRARSSVVLSGADTLLADDARLNVRPDELGLNAE LTALAAARQPLRVLVDGRLRVPLESAFYQAGPALVATCAAASARERFQDAGHELLALP SAEGHVDLHKLLLELAARGANEVLVEAGPRLAGAFARLGLVDEYRLFVAPKFLGSSAR PLLDWPLARMADAAQLRIDDIRAVGDDWLVTARPHLRDA" misc_feature complement(4536924..4538030) /gene="ribD" /locus_tag="PA4056" /note="Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as a cofactor. This is an essential step in the biosynthesis of deoxythymidine phosphate since 5,6,7,8-tetrahydrofolate is required to regenerate 5; Region: DHFR; cl17279" /db_xref="CDD:473077" gene complement(4538039..4538503) /gene="nrdR" /locus_tag="PA4057" /db_xref="GeneID:879080" CDS complement(4538039..4538503) /gene="nrdR" /locus_tag="PA4057" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="transcriptional regulator NrdR" /protein_id="NP_252746.1" /db_xref="GeneID:879080" /translation="MHCPFCGAHDTKVIDSRLVAEGDQVRRRRECLACGERFTTFETA ELVMPRLIKQDGSRQPFDEDKLRAGMQRALEKRPVSVERLEAAIGHIKHQLRATGERE IKSRVLGELVMAELQKLDEVAYIRFASVYRRFQDLNEFREEIERLAREPAKE" misc_feature complement(4538045..4538503) /gene="nrdR" /locus_tag="PA4057" /note="Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains [Transcription]; Region: NrdR; COG1327" /db_xref="CDD:440938" gene 4539156..4539817 /locus_tag="PA4058" /pseudogene="unknown" /db_xref="GeneID:878920" gene 4539539..4539817 /locus_tag="PA4060" /db_xref="GeneID:878782" CDS 4539539..4539817 /locus_tag="PA4060" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252749.1" /db_xref="GeneID:878782" /translation="MELSYSADFFAEDDRFDLILVADVLYDRANLPLLDQFLSRGRQA LVADSRVRDFRHPLYRRLDVLEACTWPDLAEPAEFRLVSLYHAERGQA" misc_feature <4539566..4539781 /locus_tag="PA4060" /note="Protein N-terminal and lysine N-methylase, NNT1/EFM7 family [Posttranslational modification, protein turnover, chaperones]; Region: Nnt1; COG3897" /db_xref="CDD:443104" gene 4539889..4540758 /locus_tag="PA4061" /db_xref="GeneID:878783" CDS 4539889..4540758 /locus_tag="PA4061" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="NP_252750.1" /db_xref="GeneID:878783" /translation="MSDTPYIFDVTGANFEQLVIENSFHKPVLVDFWADWCAPCKALM PLLAQIAESYQGELLLAKVNCDVEQDIVMRFGIRSLPTVVLFKDGQPVDGFAGAQPES QIRALLEPHVKAPALPDEDPLEVAQALFAEGRIGDAEATLKALLAENNENAAALILYA RCLAERGELEEAQAILDAVKSDEHKQALAGARAQLTFLRQAADLPDSAELKSRLAADA GDDEAAYQLAVQQLARQQYEAALDGLLKLFLRNRGYQDDLPRKTLVQVFDLLGNDHPL VTAYRRKLYQALY" misc_feature 4539904..4540224 /locus_tag="PA4061" /note="Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family [Posttranslational modification, protein turnover, chaperones]; Region: CnoX; COG3118" /db_xref="CDD:442352" misc_feature 4540246..4540332 /locus_tag="PA4061" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276808" misc_feature 4540282..4540473 /locus_tag="PA4061" /note="Tetratricopeptide repeat; Region: TPR_19; pfam14559" /db_xref="CDD:434038" misc_feature 4540345..4540428 /locus_tag="PA4061" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276808" misc_feature 4540486..4540755 /locus_tag="PA4061" /note="Tetratricopeptide repeat; Region: TPR_20; pfam14561" /db_xref="CDD:434039" misc_feature 4540546..4540641 /locus_tag="PA4061" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276808" misc_feature 4540654..4540752 /locus_tag="PA4061" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276808" gene complement(4540783..4541139) /locus_tag="PA4062" /db_xref="GeneID:878820" CDS complement(4540783..4541139) /locus_tag="PA4062" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252751.1" /db_xref="GeneID:878820" /translation="MVRIRGSIGDWPVDLTLELDAEDWRQLAQHVPPPPLGEPQVAAA RAPAPAAPVDRLWQTAQDLLRGSGRIEGPQLLAELEGFSGNAGAAKQLLVRLRHDARV KVEVVDGTQVFVWLED" gene 4541272..4541862 /locus_tag="PA4063" /db_xref="GeneID:878821" CDS 4541272..4541862 /locus_tag="PA4063" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252752.1" /db_xref="GeneID:878821" /translation="MRPLLLALVLLPFAAQAHDDHDHDHAHGSLGKHEHGVAQLNVAL DGKTLELELDSPAMNLVGFEHAASTDADKAAVAKARAQLEKPLELFALPVTAGCSVAS QELRSPLFGDKAPAHAHKEKAGHEHEHEHEHEHGHADIHAHYQLSCEKPELLKLLTLA EFFKRFPATQKIQVQLIGPDGQKGADLAPASAELKL" misc_feature 4541362..4541844 /locus_tag="PA4063" /note="Protein of unknown function (DUF2796); Region: DUF2796; pfam10986" /db_xref="CDD:463200" gene 4541951..4542655 /locus_tag="PA4064" /db_xref="GeneID:878673" CDS 4541951..4542655 /locus_tag="PA4064" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_252753.1" /db_xref="GeneID:878673" /translation="MSALITLTNLGFAWPGQAELLDIPSFHLERGESLFLKGPSGSGK TTLLGLLGGVQKPGRGSIRLLGEDLEKLSAARRDHFRVDHTGYIFQQFNLLPFLSVRE NVELPCHFSALRRQRARERHGSPAQAASHLLGQLGLGGELHERRADSLSIGQQQRVAA ARALIGQPELVIADEPTSALDADSREAFLQLLFAECREAGASLLFVSHDQSLAGLFDR SLSLSDLNRAARPAGL" misc_feature 4541963..4542622 /locus_tag="PA4064" /note="ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and Cell division ATP-binding protein FtsE; Region: ABC_MJ0796_LolCDE_FtsE; cd03255" /db_xref="CDD:213222" misc_feature 4542062..4542085 /locus_tag="PA4064" /note="Walker A/P-loop; other site" /db_xref="CDD:213222" misc_feature order(4542071..4542076,4542080..4542088,4542218..4542220, 4542470..4542475,4542572..4542574) /locus_tag="PA4064" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:213222" misc_feature 4542209..4542220 /locus_tag="PA4064" /note="Q-loop/lid; other site" /db_xref="CDD:213222" misc_feature 4542398..4542427 /locus_tag="PA4064" /note="ABC transporter signature motif; other site" /db_xref="CDD:213222" misc_feature 4542458..4542475 /locus_tag="PA4064" /note="Walker B; other site" /db_xref="CDD:213222" misc_feature 4542482..4542493 /locus_tag="PA4064" /note="D-loop; other site" /db_xref="CDD:213222" misc_feature 4542560..4542580 /locus_tag="PA4064" /note="H-loop/switch region; other site" /db_xref="CDD:213222" gene 4542658..4543923 /locus_tag="PA4065" /db_xref="GeneID:878674" CDS 4542658..4543923 /locus_tag="PA4065" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252754.1" /db_xref="GeneID:878674" /translation="MYLFRLALASLANRRFTALLTIFAIALSACLLLAVERVRTEAKA SFASTISGTDLIVGARSGSVNLLLYSVFRIGNATNNIRWDSYRHFAENPRVKWAIPIS LGDSHRGYRVMGTDAGYFEHYRYGRGQELQLAEGRAFGQDLFDVVLGAEVAEALHYRL GEKIVLAHGVSTVSLVKHDDKPFTVVGILQRTGTPVDRTLHISLAGMEALHVDWRNGV PAMGAGRVSAEQARHMDLQPQTITAFLVGLKSKVATFALQREVNDYPGEPLMAILPGV ALQELWGLMGTAEKALFVVSLFVVLTGLIGMLTAILTSLNERRREMAILRSVGARPWH IFGLLLAEAFSLALAGVALGLGLLYLGIAASQGYVQANYGIYLPLAWPSDYEWSLLGA ILAAAVLIGCVPAWRAYRQSLADGLSIRL" misc_feature 4542709..4543353 /locus_tag="PA4065" /note="MacB-like periplasmic core domain; Region: MacB_PCD; pfam12704" /db_xref="CDD:463676" misc_feature 4543087..4543908 /locus_tag="PA4065" /note="ABC-type transport system involved in lipoprotein release, permease component LolC [Cell wall/membrane/envelope biogenesis]; Region: LolE; COG4591" /db_xref="CDD:443648" gene 4543941..4544459 /locus_tag="PA4066" /db_xref="GeneID:879792" CDS 4543941..4544459 /locus_tag="PA4066" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252755.1" /db_xref="GeneID:879792" /translation="MLRSLTVLLLAFALLLGSAVARAAPRELTWSQLIPAGAPPAPAP LPIHDLANALSEAGPAASQQSPNAPVVKALDGIEAKLPGYIVPLEISEAGLVTEFLLV PYYGACIHVPPPPSNQIVYVKTAKGVQMDELYQPFWVEGTFKVENASSELAAAGYRMQ ASKVTPYEYEGG" misc_feature 4543992..4544450 /locus_tag="PA4066" /note="Uncharacterized conserved protein, DUF3299 family [Function unknown]; Region: COG3495" /db_xref="CDD:442718" gene 4544607..4545305 /gene="oprG" /locus_tag="PA4067" /db_xref="GeneID:879793" CDS 4544607..4545305 /gene="oprG" /locus_tag="PA4067" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="outer membrane protein OprG" /protein_id="NP_252756.1" /db_xref="GeneID:879793" /translation="MRKSWLTASLLALTVASPFAAADIQGHKAGDFIIRGGFATVDPD DSSSDIKLDGAKQRGTKATVDSDTQLGLTFTYMFADKWGVELVAATPFNHQVDVKGLG PGLDGKLADIKQLPPTLLLQYYPMGGTNSAFQPYGGLGVNYTTFFDEDLASNRKAQGF SSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIDTKASINGPSALGVNKTKVDVD VDPWVYMIGFGYKF" misc_feature 4544610..4545302 /gene="oprG" /locus_tag="PA4067" /note="Outer membrane protein OmpW [Cell wall/membrane/envelope biogenesis]; Region: OmpW; COG3047" /db_xref="CDD:442281" gene complement(4545746..4546675) /locus_tag="PA4068" /db_xref="GeneID:878712" CDS complement(4545746..4546675) /locus_tag="PA4068" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="epimerase" /protein_id="NP_252757.1" /db_xref="GeneID:878712" /translation="MFERPILITGGAGFIGSHLTDALLARGYRVRVLDNLSTGKRDNL PLDDERVELLEGDAADAATLAAALKGCAAVAHLAAVASVQASVDDPVATHQSNFIATL NLCEAMREQGVKRVVFASSAAVYGQNGEGTAIDEDTPKSPLTPYASDKLASEYYLDFY RRQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERALKGTPITVFGDGEQTRDFIY VADLVDFLVQALEATAVEPGAVNVGLNRSISLKQLLAEIGQVLGGLPPVTHADARAGD IRHSRANNERLLRRFRFDQPTPMGVGLARLLGR" misc_feature complement(4545755..4546660) /locus_tag="PA4068" /note="A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous...; Region: Rossmann-fold NAD(P)(+)-binding proteins; cl21454" /db_xref="CDD:473865" misc_feature complement(order(4546148..4546159,4546226..4546228, 4546238..4546240,4546313..4546321,4546439..4546447, 4546568..4546576,4546631..4546633,4546637..4546642, 4546646..4546648)) /locus_tag="PA4068" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187566" misc_feature complement(order(4546226..4546228,4546238..4546240, 4546313..4546315,4546385..4546387)) /locus_tag="PA4068" /note="active site" /db_xref="CDD:187566" gene complement(4546668..4547552) /locus_tag="PA4069" /db_xref="GeneID:878713" CDS complement(4546668..4547552) /locus_tag="PA4069" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252758.1" /db_xref="GeneID:878713" /translation="MRMRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPEQGWDAASL TTLLDETRPDAVINLAFYHDWFQAEQVEAERLGAQERAVERLAELCQHYEILLVQPSS YRVFDGARATAYSEKDETLPLGLRGQALWRMEQSVRAACPRHVLIRFGWLLDESPNGL LGRFLSRAEQPQPLFLADDRRGNPTPVDDAARVVLSVLKQLDCQAPLWGTYHYGGLEA TTTLALGQVILNEARTYRSNLIQEPSAEAHAARPDALDEPQHAVMVCKKILHTFGIKP RAWRAGLPALLDRYYRHV" misc_feature complement(4546680..4547540) /locus_tag="PA4069" /note="RmlD substrate binding domain; Region: RmlD_sub_bind; pfam04321" /db_xref="CDD:427865" gene complement(4547821..4548771) /locus_tag="PA4070" /db_xref="GeneID:878693" CDS complement(4547821..4548771) /locus_tag="PA4070" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="FeaR family transcriptional regulator" /protein_id="NP_252759.1" /db_xref="GeneID:878693" /translation="MHTLSSAHNSFEAWNQALRQVCGRFESQPALNRTLFIGDISRQD LGGLELAQIRTNAGRIARQATHADHDDDRHCFLVVQRSGHAQLRQGGDSIELAPGEMA LMDSAGGCEIIPHGLIEHTSFHLSREEVCRHLPPSQRAFGKLSPNCASGRLLSLLVQQ VCAGELQPWAVADEGGALQEALIALLGPALQHAGEELEGPLAGLYGYSLRRHAERLIE QSLQEPRLSPDMLAGRLRISVRQLYRLFEEQGDSVCRYILRQRLSRSAADLGNPRLRG ESITSIAFKWGFSDSAHFSRAFKKQFEVSPKDYRAGALPA" misc_feature complement(4547830..4548768) /locus_tag="PA4070" /note="DNA-binding transcriptional activator FeaR; Provisional; Region: PRK09685" /db_xref="CDD:236612" gene complement(4548932..4549510) /locus_tag="PA4071" /db_xref="GeneID:878694" CDS complement(4548932..4549510) /locus_tag="PA4071" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252760.1" /db_xref="GeneID:878694" /translation="MSAWARWYERHWRDWRPAAYRPGATLALVRRNLAACDGEAQDGR LLLRTKELSLEVRERVQAHLFMHIVSTEFSLFVAAPGGPPASLELRHAGCLRRRGILC KVRSGSGLEPLREALQGGDRVLLEQLMPLDFRSLRLCRDDRGWTVSLEHLGACEVVNR FPAYRRYIPLVAEQRLALLGAFAQLQRLLSPA" misc_feature complement(4548944..4549405) /locus_tag="PA4071" /note="Protein of unknown function (DUF3156); Region: DUF3156; pfam11354" /db_xref="CDD:431835" gene complement(4549485..4550975) /locus_tag="PA4072" /db_xref="GeneID:878686" CDS complement(4549485..4550975) /locus_tag="PA4072" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_252761.1" /db_xref="GeneID:878686" /translation="MSNSRLTQHLLRGRVGFPTALASSVGLIMASPVILTATTGFGLG GGTFAVAMLVALLLMLAQSTTFAEAACLLPTRGSVYDYLSCGLGRFFAITGTLSAYLI VHVFAGTAETMLSGTMALVNFESLNTLTEPGGSAWLVGVGMVLCFGLLNALGITAFGR AEVILTFGMWSTLMIFAVAGLLRLPAVELQGWFGASMVGDDLPTLLSLVGMAMFMFVG CEFVTPLAPEVRHASRTLPRAMALGLIGVACCMFLYGAAMRRQVENLDLGGGLHLLET PMAIPRFAEQVMGPFGRIWLGVGLLFAGAATINTLMAGLPRILYGMALDGALPKAFTY LHPRFKTPLLCIAVAAAIPCLHAWWLGGDSEGIIHLVLAAVCAWGTAYLLVTLSVVLL RIRRPDLPRAYRSPLFPLPQLFSSAGILLGMFYITPPGMNPVDIYLPFALMLGLAAAY ALFWTLCVQRVNPFRPLAVEEVLEKEFAEEDQQQRERAHVRLGALV" misc_feature complement(4549614..4550966) /locus_tag="PA4072" /note="Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; Region: PotE; COG0531" /db_xref="CDD:440297" gene complement(4551143..4552630) /locus_tag="PA4073" /db_xref="GeneID:878687" CDS complement(4551143..4552630) /locus_tag="PA4073" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase" /protein_id="NP_252762.1" /db_xref="GeneID:878687" /translation="MSIAIDPSVSAFLRSPHGLLIDGESGPARSGADMPLYDPATGAE LARVARAGAEDVDRAVAAARRAFEGNWAGQRPADRERLLLRLAERIEAHGEQLAQLET LNNGKSINLSRALEVGASVEFIRYMAGWATKIEGRSLDLSIAAVPGARYRAYTVPEPV GVVGAIVPWNFPLLMAIWKIVPALACGCTVVLKPADETPLTALRLGQLCLEAGIPPGV VNIVTGTGAEAGAALAAHPGIDKLAFTGSTPVGKLIGHAAVENMTRFSLELGGKSPVI ILDDTSLDMAAAGSAGAIFFNQGQVCTAGSRLYVQRKRFDQVLERLAAIAGDLSIGPG LDPTTQINPLVSARQQERVLGMIESGVAEGASVVCGGARQGETGFYVQPTILADVTPG MQVVREEIFGPVLVATPFDDLDEAVRLANDSIYGLGASIWSNDLRQVMDLVPRIKAGT VWVNAHNLLDPSMPFGGFKQSGIGREMGHAAIEAYTENKSVCIAY" misc_feature complement(4551146..4552588) /locus_tag="PA4073" /note="Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase [Lipid transport and metabolism]; Region: AdhE; COG1012" /db_xref="CDD:440636" gene 4552859..4553527 /locus_tag="PA4074" /db_xref="GeneID:878699" CDS 4552859..4553527 /locus_tag="PA4074" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252763.1" /db_xref="GeneID:878699" /translation="MPSTLSPDLGPRCMQAFTQVVPASLCVFYRIDEDCRAHDFQLLR MPAGMHRDYLRHYRDYDPLQPRHCLASASPVVPLRQGIARQPAEDSALYQGFLRRHGI CDVVEVLAHAHQRPVAALSLLRDARLGAFSDQELRQLRALHGLMELAAQACATPTASA ERLQGLTPREREIALLLRDGVSNKCLAQCLGLGLPTVKTHLLNLFRKTGARSRTELVK RLFL" misc_feature 4552973..4553518 /locus_tag="PA4074" /note="DNA-binding transcriptional regulator, CsgD family [Transcription]; Region: CsgD; COG2771" /db_xref="CDD:442052" misc_feature 4553345..4553518 /locus_tag="PA4074" /note="helix_turn_helix, Lux Regulon; Region: HTH_LUXR; smart00421" /db_xref="CDD:197715" gene complement(4553524..4554360) /locus_tag="PA4075" /db_xref="GeneID:878700" CDS complement(4553524..4554360) /locus_tag="PA4075" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252764.1" /db_xref="GeneID:878700" /translation="MVAGGLWENGEMATGDEFDALLAEAGRTPMRGWEYDYGGRIRLE PPPWDFPGRMLERCRAAASLLDMGTGGGEWLSRLPYRPPLTVATEGWAPNLEIARGRL EPLGIRVVEVEGAPDNHRQGREGDGGGALPFADGTFDLVGNRHESYLPSEVRRVLAPG GCFLTQQVAGDFNREFYALLGEPAPTPEAPHWNLGFARAQLEAAELPPVAGGEGWEVL HFADVGALAWYLLNLPWVFPGFSFRRHRERLRGLHESGKPLAVRQFLFWLEARSPQAA RG" misc_feature complement(4553815..4554219) /locus_tag="PA4075" /note="Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Region: UbiE; COG2226" /db_xref="CDD:441828" gene 4554467..4554841 /locus_tag="PA4076" /db_xref="GeneID:878706" CDS 4554467..4554841 /locus_tag="PA4076" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252765.1" /db_xref="GeneID:878706" /translation="MTHKRFFLELLLALVGYAAAVLISGQSLAGTEPGAGRVFLALLP VPPMVALALVVIRYLRRLDEMARRIHLEALALAFVGTALLTFTYGFLETTGFPKLSMF FVWPLMGAFWVIGCVLGLRRYA" gene 4554838..4555044 /locus_tag="PA4077" /db_xref="GeneID:878707" CDS 4554838..4555044 /locus_tag="PA4077" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252766.1" /db_xref="GeneID:878707" /translation="MRNRVRELRAERGWSQAELAGKLEVSRQTVNAIETGRYDPSLPL AFKLARVFGLAIEAIFDDREGQLD" misc_feature 4554838..4555029 /locus_tag="PA4077" /note="DNA-binding transcriptional regulator, XRE-family HTH domain [Transcription]; Region: XRE; COG1476" /db_xref="CDD:441085" gene 4555254..4558229 /locus_tag="PA4078" /db_xref="GeneID:878689" CDS 4555254..4558229 /locus_tag="PA4078" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="nonribosomal peptide synthetase" /protein_id="NP_252767.1" /db_xref="GeneID:878689" /translation="MSKDSVLGLFRQHADTHPERPALVDRERSFSYRELDRLSDRLAA HLARRGVARGELLPLLAERSAELVIAILAAAKCAAAYVPVDRRQPDRRKREVLRQCQA PLALATHAEDLPGQPVEVIAQALATSAAGAAPRPALDGSEALYVIFTSGTTGEPKGVV IESRSLANLVGWHNRRFNMDQRSRTTLMAGVGFDVSQWEIWSTLCAGACLHLVPDEVR PDPAALLAFFAEQRISHAFAPTVMVPALAEQPAPPSLALRYLFCAGEKLPPVATGGLP YTVVDYYGPTEATVFATCRIVDAEAHRRPASIGTPIDGCEAFILDADDRPCHGDRPGE LNLAGVCLAREYLRDPDMTARRFHYSQALRRRLYRTGDKARWLADGSLQFLGRLDDQV KIRGHRVELGDVEAALLRQPAIHGAVVLAHADPRSGSQQLSAFVVPRQQDGDARAVLA AIKTALRQELPDYMLPSRYLSLDSLPTTVNGKIDRQALRRHLDEQCQERLDEQRFGTP GELQVALSWQEVLGHTDFGLDDSFFEVGGHSLLAAALVRELSRRFGNRAYIHDIYRTP SVRQLAASLARRAGEAPPALDSEPAQELQRDVRLPADVDFSRPTDTAQLLAPRHILLT GASGLMGAHLLAELLASREADLHCPVRAQNDAHALERLRQAARQHRIELAETDWRRVR AYAADLAEPGFGLPAETYRELAGSVDQVFHSASAVNFIQPYSYMKRDNVEGLGQVLRF CASGRCKPLMLLSSISVYSWGHLHTGKRLMREDDDIDQNLPAVVTDMGYVRSKWVMEK IADLAAERGLPLMTFRLGYATCHSRTGAYADYQWWSRLARTCLEYRAVPLLRELREGL TTVDYMVEAISVIARQPSALGKKFNLVPSIPRCLTLDEFFGRLGRRAGRPLRQMPFDD WVSLWEDNRDAPLYPLLSMFRDNMYAGRSTVELYQDTYLWDCTNVEEHLRGSAVREPE FDDRLLDLYLAGLGGSAMR" misc_feature 4555281..4556720 /locus_tag="PA4078" /note="similar to adenylation domain of virginiamycin S synthetase; Region: A_NRPS_VisG_like; cd17651" /db_xref="CDD:341306" misc_feature order(4555689..4555691,4555698..4555715,4555719..4555724) /locus_tag="PA4078" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341306" misc_feature order(4555698..4555703,4556043..4556048,4556094..4556111, 4556175..4556177,4556367..4556369,4556403..4556405, 4556412..4556414,4556697..4556699) /locus_tag="PA4078" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341306" misc_feature 4556802..4556963 /locus_tag="PA4078" /note="Phosphopantetheine attachment site; Region: PP-binding; pfam00550" /db_xref="CDD:425746" misc_feature 4557111..4558223 /locus_tag="PA4078" /note="thioester reductase domain; Region: Thioester-redct; TIGR01746" /db_xref="CDD:273787" gene 4558302..4558991 /locus_tag="PA4079" /db_xref="GeneID:878690" CDS 4558302..4558991 /locus_tag="PA4079" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_252768.1" /db_xref="GeneID:878690" /translation="MHNVLIVGASRGIGLGLADAFLQRGAQVFAVARRPQGSPGLQAL AERAGERLQAVTGDLNQHDCAERIGEMLGERRIDRLIVNAGIYGPQQQDVAEIDAEQT AQLFLTNAIAPLRLARALSGRVSRGGVVAFMSSQMASLALGLSATMPLYGASKAALNS LVRSWEGEFEELPFSLLLLHPGWVRTEMGGDSAPLSVEESAAGLVAAVEDAAGVNACR FVDYRNQPLPW" misc_feature 4558302..4558988 /locus_tag="PA4079" /note="SDR family oxidoreductase; Region: PRK08177" /db_xref="CDD:236173" misc_feature order(4558323..4558325,4558329..4558334,4558338..4558340, 4558395..4558403,4558548..4558556,4558698..4558706, 4558752..4558754,4558764..4558766,4558842..4558853) /locus_tag="PA4079" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature order(4558626..4558628,4558704..4558706,4558752..4558754, 4558764..4558766) /locus_tag="PA4079" /note="active site" /db_xref="CDD:187535" gene complement(4559006..4559650) /locus_tag="PA4080" /db_xref="GeneID:878667" CDS complement(4559006..4559650) /locus_tag="PA4080" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="response regulator" /protein_id="NP_252769.1" /db_xref="GeneID:878667" /translation="MSLHRIRVMVADDHPAISLGISYELSQCGSLEMLGQVSNSTELI GRLNEGDCDVVIVDYTMPGGKYGDGLALLSLLRRRYPHLQLVVFTMLNNPGLIRAILK QGINCILSKSDSTSHLLAAVSAAYSRNQYFSPSIRDIFVNQVLSSHNERLTPREAEIV RLFGSGLTITEIAERSHRSVQTISTQKVSAMKKLGIKRDADLIRYAAEGYCRMP" misc_feature complement(4559036..4559644) /locus_tag="PA4080" /note="transcriptional regulator RcsB; Provisional; Region: PRK10840" /db_xref="CDD:182771" gene complement(4560295..4561440) /gene="cupB6" /locus_tag="PA4081" /db_xref="GeneID:878668" CDS complement(4560295..4561440) /gene="cupB6" /locus_tag="PA4081" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="fimbrial subunit CupB6" /protein_id="NP_252770.1" /db_xref="GeneID:878668" /translation="MSMRLFPGRVSLRRRPGAQARQALVLGLCCLTGGQAWALNEVAL NCSFDNGKGLPWRVVNELTSGTAKGTVLFARPVSLFLNYKPQASQEAHELVIGGNWSG VGYPGPYGTVASDVKGIGYRISVDAQDGVKRVIPVDNQPHALDKRVTSFSGSTTSDYL QELVLTVDPGELPAGDLKVTSVSGSATLNLWAVDRLKGEASIGSVLAVPADNYPTGVC RKPYSLIGPASIAIGGGPPPPPIPKKCKVEVGREINVKLGSVALKNFPRVNDTSTERS FDISLSECAALAKPEIAFRDKYVSAQQADPTILSLKSGGAAGFGIVVKNGLDQQRIRF DGTPYPMRRVGDSADLPLSAAYIRIGAEGELKAGVADGAAEFTFTFP" misc_feature complement(4560298..>4560708) /gene="cupB6" /locus_tag="PA4081" /note="Pilin (type 1 fimbrial protein) [Cell motility]; Region: FimA; COG3539" /db_xref="CDD:442760" gene complement(4561540..4564596) /gene="cupB5" /locus_tag="PA4082" /db_xref="GeneID:878708" CDS complement(4561540..4564596) /gene="cupB5" /locus_tag="PA4082" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="adhesive protein CupB5" /protein_id="NP_252771.1" /db_xref="GeneID:878708" /translation="MNKCYALVWNVSQGCWNVVSEGSRRRGKPAGAKAAIASVLALLG ATALAPAYALPSGGTVVGGSANGEIHLSGGNSLSVNQKVDKLIANWDSFSVAAGERVI FNQPSSSSIALNRVIGTKASDIQGRIDANGQVFLVNPNGVLFGRGAQVNVGGLVASTL DITDAEFNGNSSRYRFTGPSTNGVLNHGGAITAAEGGSIALLGAQVDNRGTVLAQMGG VGLGAGSDLTLNFDGNKLLDIRVDAGVANALASNGGLLKADGGRVLMAARTANALLNT VVNSQGAIEARSLRGKNGRIVLDGGPDGKVMVGGALSANALNGPGHGGTVEVRGQAVE VALGTQVNTLASNGLNGTWKIAADKIDVRPSAVSDGVTVHADTLSRNLASTNIELVST KGDLDLDGSVNWASGNRLGLGSAADLTLNGRLNASGAKAGLELKAEGAIDINDKIVLG GAGSALAMDAGEGHRVNGTASVSLAGANATYVSGGYYYTVVQNLAQLQAINKNLDGLY VLGGNILGGSYYCTALQSIGGPAGVFSGTLDGLGNSIGNLSISNTGPNVGLFARSSGT LSNLKLNNLRVSDNTYGSGPSSLGALVGINSGRIANVSASGVSVVGSRLRSNALGGLV GRNISGQIANASVSGGVTGYAASTAVGGLVGENFTTAWGPEAVIENAHSNVHVAAQST ERNSLGGVGGLVGLNAKGMIRASGSQGKVETYRPGLNVGGLVGYNMFGHVSDSSASGQ VEAGGAGNTGGLVGLSSGGEIFRSQASGSVYSKGGLATGGLIGKAEGNGMLGNLKASG SVTDQGGADLGGLVGNNSQSAIETAEATGKVSGGSNSRVGGLIGHNLGGSVAHAISRG DVSGGFNSLVGGLVGHNGGELVNVDASGRVSAAASASVGGLVGSNAGSILSARSSSTV NGSGRSRIGGLVGENQIQGRIVSSMSEGTVSGDYYVSMGGLAGLNLGSIEYSGVSGKI DFKPQSHYGQIYGAQVGENHGVLGGNYVIGEAALLPPAGIDYGNIW" misc_feature complement(<4564480..4564596) /gene="cupB5" /locus_tag="PA4082" /note="Extended Signal Peptide of Type V secretion system; Region: ESPR; pfam13018" /db_xref="CDD:463773" misc_feature complement(4563673..4564440) /gene="cupB5" /locus_tag="PA4082" /note="TPS secretion domain; Region: TPS; pfam05860" /db_xref="CDD:461762" misc_feature complement(4561708..>4564407) /gene="cupB5" /locus_tag="PA4082" /note="Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport]; Region: FhaB; COG3210" /db_xref="CDD:442443" gene complement(4564684..4565424) /gene="cupB4" /locus_tag="PA4083" /db_xref="GeneID:878709" CDS complement(4564684..4565424) /gene="cupB4" /locus_tag="PA4083" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="chaperone CupB4" /protein_id="NP_252772.1" /db_xref="GeneID:878709" /translation="MTGVGLGRCGTAWVLLVALVADASASLSVIGTRFIYPAGVSALT IRVGNVGTRPALVQTWLDRGDETADPSAVTVPFILSPPLLRMDPQETQALQLRHTGEP LPDDRESLFWVNLLEVPGREDGSGNLLLVSYRLRMKLLFRPQGLSGDPRAAARQVVWR LRPAVRPGQRALLEADNRSPYHVSLVRLELGEGDLAMSLGSVTLPPFALTPLSLPAVP GEAARVHFDAVGDDGQIERGDAPAERYP" misc_feature complement(4564702..4565403) /gene="cupB4" /locus_tag="PA4083" /note="P pilus assembly protein, chaperone PapD [Extracellular structures]; Region: FimC; COG3121" /db_xref="CDD:442355" gene complement(4565421..4567955) /gene="cupB3" /locus_tag="PA4084" /db_xref="GeneID:878724" CDS complement(4565421..4567955) /gene="cupB3" /locus_tag="PA4084" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="usher CupB3" /protein_id="NP_252773.1" /db_xref="GeneID:878724" /translation="MAVASPAGGLDAPSRRIVFDAQMLALGPGGRSIDTSRFERGDVI EPGRYRLDLLLNSRWRGVEEVELRRQPGRESAVFCYDRGLLERAGIDLEKSARGQDRS SARDPLPEGLHCDPLERYVPGARVKLDIAEQSIYVSVPSYYLSLDSSKTYVDPASWDS GISAALLNYNSNLHVRENHGRSATSGYAGMNAGFNFGRARLRHNGTATWSRRMGSHYQ RSATYVQTDLPAWRAQLLLGENSTSSEFFDAVSFRGVQLSSDDRMLPDSLRYYAPVVR GTASTNARVSVYQRGYLIYETTVAPGAFALDELQTASYGGDLEVRVTEASGEVRSFIV PFATTVQLLRPGTTRYSLTAGRLNDPSLERRPNMLQGVYQRGLGNDVTAYAGGAFTGS YMSGLMGAALNTPVGGFSGDVTLARTEVPGDDRLSGSSYRLAYSKNLPNTGTNFSLLA YRYSTGGYLGLRDAAFMQDRVERGEPLESFSRLRNRLDANISQQLGNGGNLYLNGSSQ RYWSGGGRAVNFSVGYSNQWRDVSYSISAQRLRSQYEGFSSGDRRGETSTLFSLNLSI PLGGAGRGSPTLSSYLTRDSNSGTQLTSGVSGMLGKRGEASYSLSASHDRDSRQTSKS ASLDYRLPQVELGSSLSQGPGYRQLSVKAAGGLVAHSGGITAAQTLGETIGLVHAPNA RGAAAGYSGSRIDRHGYAVIPNLLPYQLNSVDLDPNGMADEIELRSSSRNVAPTAGAV VRLDYPTRVARPLLVDSRMPSGEPLPFAAEVLDAHSGQSVGAVGQGSRLVLRVEQDRG SVRVRWGNEPQQQCLVDYALGPRETTPPVLQLACRPASAADRERTL" misc_feature complement(4565457..4567955) /gene="cupB3" /locus_tag="PA4084" /note="Outer membrane usher protein FimD/PapC [Cell motility, Extracellular structures]; Region: FimD; COG3188" /db_xref="CDD:442421" gene complement(4568277..4569023) /gene="cupB2" /locus_tag="PA4085" /db_xref="GeneID:878725" CDS complement(4568277..4569023) /gene="cupB2" /locus_tag="PA4085" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="chaperone CupB2" /protein_id="NP_252774.1" /db_xref="GeneID:878725" /translation="MAPLMHRFHSFVAASAVAIALCVGTAHAGLIAQGTRVVFPASER EVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYL KAPLPTDRESLFWLNILEVPPRDEDENNALQFSFRSRFKLFFRPSQLKSVDSAAGKLQ WKFLESGGAGKKTVVQVNNPTPYYVSFASVELIVDGRVMSVGKGMVAPFSTKEFDWQG NPKNMEAASVRYEVINDYGGRNTHDRALGK" misc_feature complement(4568286..4569011) /gene="cupB2" /locus_tag="PA4085" /note="P pilus assembly protein, chaperone PapD [Extracellular structures]; Region: FimC; COG3121" /db_xref="CDD:442355" gene complement(4569054..4569623) /gene="cupB1" /locus_tag="PA4086" /db_xref="GeneID:878758" CDS complement(4569054..4569623) /gene="cupB1" /locus_tag="PA4086" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="fimbrial subunit CupB1" /protein_id="NP_252775.1" /db_xref="GeneID:878758" /translation="MNKFKRAILAPLVASGTLLALMSPVAHAVDGIVNFSGNITEVAC DINGQAPGAGNVTNVDLGIVAPTHFTAVGTNSTFQEFDLVLSGAGCTNDKKVSIAFDQ VTNVDRISGNLMLMGPSEAKGVQIQIFNNSATNTTKIPLGLVEAAPQKATVVKNTATL KYKASYVSTEKAVTAGTGLSRIRYLLAYE" misc_feature complement(4569057..4569590) /gene="cupB1" /locus_tag="PA4086" /note="Pilin (type 1 fimbrial protein) [Cell motility]; Region: FimA; COG3539" /db_xref="CDD:442760" gene 4570096..4570920 /locus_tag="PA4087" /db_xref="GeneID:878759" CDS 4570096..4570920 /locus_tag="PA4087" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252776.1" /db_xref="GeneID:878759" /translation="MSAHSHSGWITVGALADGFAPDNHVLPACGDLAGLERVLHFANG WVIEHAFDSQRLRWRLADGSASGESDYRASSLRENLYLVDFLKQENGRPVSVSLVLDF DNQAFTAVLGHLPDRAACEQGLFARALAGRELTGVEAEFLHGSLDRPWQPGACPHVPS DELVGLRNRYVYSASEAYEHIYLNPAFYTWQCLRGAERGLADTDRCHCYRLAERLYLF VWREKIVPTLGVLLIDLEAGRTDGKIFGYQDDDFATPVNFPVGALAQVLNQTRHDL" misc_feature 4570114..4570443 /locus_tag="PA4087" /note="MoaF N-terminal domain; Region: MoaF; pfam10703" /db_xref="CDD:431447" misc_feature 4570564..4570905 /locus_tag="PA4087" /note="MoaF C-terminal domain; Region: MoaF_C; pfam17409" /db_xref="CDD:435904" gene 4570929..4572314 /locus_tag="PA4088" /db_xref="GeneID:878742" CDS 4570929..4572314 /locus_tag="PA4088" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_252777.1" /db_xref="GeneID:878742" /translation="MDTTFGLDLARVETLFKRELRRFDELHPRSAQAYRENRRHWLYG APLHWMQQWPGNCPLLVKEAQGARVTDIDGQQYVDFALGDSGAMFGHAQPAVADAIAR QARRGSTLMLPTEDSLWVGAELARRFGLPYWQVTTSATDANRFVLRLCRMLSGRDKVV VFNCNYHGSVDESQVEFDAAGRMVPRAGVHPNGVRHATTTRLVEFNDLDALEAALAHG DVAAVLTEPFMTNVGMVPPAEGFHAGLRELTRRHDVALIIDETHTISCGPAGYSGAHG LEPDFFVLGKCIAGGIPSAVWGCSQAQAERIWAVLPHFRPGQAINHFGFGGTLAGNAL QLAAMRATFAEVMTEDAYRHMFQLAAQLEAGVRATLEELRLPWHVTRIGARVEYLFMT HAPRNGGEAHHARNGLIEACLHLYLLNRGVLLTPFHNMALTCPATRAEDVELHDRLLR DCLGELLERPS" misc_feature 4570929..4572302 /locus_tag="PA4088" /note="aminotransferase; Validated; Region: PRK07046" /db_xref="CDD:235917" misc_feature order(4571343..4571348,4571355..4571357,4571604..4571606, 4571703..4571705,4571712..4571714,4571781..4571786) /locus_tag="PA4088" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99735" misc_feature 4571784..4571786 /locus_tag="PA4088" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 4572311..4573072 /locus_tag="PA4089" /db_xref="GeneID:878743" CDS 4572311..4573072 /locus_tag="PA4089" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="3-ketoacyl-ACP reductase" /protein_id="NP_252778.1" /db_xref="GeneID:878743" /translation="MRRLENRVALVTGAGQGIGRAIAECFAAEGARVLLATRTASRGQ AVLEAIRLGGGTAELLAVDLSEYDAARRAVSATLERFGQLDILLHNAAAFPQCALAEL DEGTLERTLAVNLKSCFRLTQAALPALRRSVAGRVLVTSSVTGPRTAIPGLSHYAASK AGVNGFIRAAALELAGDGITVNGVEPGLVATPALGSLGDAAALAAHIPLGRVGQPLDI AHAMLFLASDEASYITGQTLVVDGGALLPENGGLA" misc_feature 4572311..4573054 /locus_tag="PA4089" /note="SDR family oxidoreductase; Region: PRK12826" /db_xref="CDD:183775" gene 4573285..4573575 /locus_tag="PA4090" /db_xref="GeneID:878726" CDS 4573285..4573575 /locus_tag="PA4090" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252779.1" /db_xref="GeneID:878726" /translation="MFRSTSHVRTESAARYVNRLCKHWGHKFEVELTPERGFIDFGDS NCELLAHPDHVLMILNSPDEDSLAHMQNVVADHLQRMANSESLEIAWQPAES" misc_feature 4573285..4573566 /locus_tag="PA4090" /note="Uncharacterized conserved protein, DUF2218 domain [Function unknown]; Region: COG3553" /db_xref="CDD:442774" gene 4573741..4575303 /gene="hpaA" /locus_tag="PA4091" /db_xref="GeneID:878727" CDS 4573741..4575303 /gene="hpaA" /locus_tag="PA4091" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="4-hydroxyphenylacetate 3-monooxygenase large subunit" /protein_id="NP_252780.1" /db_xref="GeneID:878727" /translation="MKPEDFRASATRPFTGEEYLASLRDDREIYIYGDRVKDVTSHPA FRNAAASMARLYDALHDPQSKEKLCWETDTGNGGYTHKFFRYARSADELRQQRDAIAE WSRLTYGWMGRTPDYKAAFGSALGANPGFYGRFEDNAKTWYKRIQEACLYLNHAIVNP PIDRDKPVDQVKDVFISVDEEVDGGIVVSGAKVVATNSALTHYNFVGQGSAQLLGDNT DFALMFIAPMNTPGMKLICRPSYELVAGIAGSPFDYPLSSRFDENDAILVMDKVFIPW ENVLIYRDFERCKQWFPQGGFGRLFPMQGCTRLAVKLDFITGALYKALQCTGSLEFRG VQAQVGEVVAWRNLFWSLTDAMYGNASEWHGGAFLPSAEALQAYRVLAPQAYPEIKKT IEQVVASGLIYLPSGVRDLHNPQLDKYLSTYCRGSGGMGHRERIKILKLLWDAIGSEF GGRHELYEINYAGSQDEIRMQALRQAIGSGAMKGMLGMVEQCMGDYDENGWTVPHLHN PDDINVLDRIRQ" misc_feature 4573744..4575300 /gene="hpaA" /locus_tag="PA4091" /note="4-hydroxyphenylacetate 3-monooxygenase, oxygenase component; Region: HpaB-2; TIGR02310" /db_xref="CDD:213700" gene 4575332..4575844 /gene="hpaC" /locus_tag="PA4092" /db_xref="GeneID:878735" CDS 4575332..4575844 /gene="hpaC" /locus_tag="PA4092" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="4-hydroxyphenylacetate 3-monooxygenase small subunit" /protein_id="NP_252781.1" /db_xref="GeneID:878735" /translation="MSQLEPRQQAFRNAMAHLSAAVNVITSNGPAGRCGITATAVCSV TDSPPTLMLCINRNSEMNTVFKANGRLCVNVLSGEHEEVARHFAGMTEVPMERRFALH DWREGLAGLPVLHGALANLQGRIAEVQEIGTHSVLLLELEDIQVLEQGDGLVYFSRSF HRLQCPRRAA" misc_feature 4575362..4575814 /gene="hpaC" /locus_tag="PA4092" /note="The PNPOx-like superfamily is composed of pyridoxine 5'-phosphate (PNP) oxidases and other flavin mononucleotide (FMN) binding proteins, which catalyze FMN-mediated redox reactions. Flavin reductases catalyze the reduction of FMN or FAD using NAD(P)H as...; Region: Pyridoxine 5'-phosphate (PNP) oxidase-like and flavin reductase-like proteins; cl00381" /db_xref="CDD:469750" gene complement(4575908..4576324) /locus_tag="PA4093" /db_xref="GeneID:878736" CDS complement(4575908..4576324) /locus_tag="PA4093" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252782.1" /db_xref="GeneID:878736" /translation="MTDKKEQIARFIQREFPQTRVVVEAVGERSATVWQAVDASDLRP GGTVSGPTLMAIADVALYVAVLGEIGIVPLAVTTSLTINFLRRPAADRRVVAECRLMK VGKTLAMGEVSLFSEGDAEPVAHVVGTYSIPPAHRR" misc_feature complement(4575914..4576324) /locus_tag="PA4093" /note="Acyl-CoA thioesterase PaaI, contains HGG motif [Secondary metabolites biosynthesis, transport and catabolism]; Region: PaaI; COG2050" /db_xref="CDD:441653" gene complement(4576372..4577331) /locus_tag="PA4094" /db_xref="GeneID:878728" CDS complement(4576372..4577331) /locus_tag="PA4094" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252783.1" /db_xref="GeneID:878728" /translation="MPAHALLETRRASTQDIPLEQRLAFWEDYNASILVGLKCSSYSQ AGFAATQDNLCLERLRLARIGGNEHVVERDRSMIRAVPKESIFVSLVQGSQSFFYQDN GCNLLQPGELVIYRTDKPYLFGFSGPMRQFIFDIPQDDFAERCLRDFKGPLKIGAESP VQRLLVRTLGERTRDFLDSPHGEDAERYQEEAYDLLASIISDHAGEHRASALGASYLL AAKQYIQQHLDEPALSCERVAAATGVSSRHLARLFAQEGSSPGRYLQERRLERARQLL ASPQGRRLDVAEVAYRHGFSSQAHFARAFKARYGMTPSEARGR" misc_feature complement(4576375..4577157) /locus_tag="PA4094" /note="DNA-binding transcriptional activator FeaR; Provisional; Region: PRK09685" /db_xref="CDD:236612" misc_feature complement(4576375..>4576683) /locus_tag="PA4094" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene 4577650..4578183 /locus_tag="PA4095" /db_xref="GeneID:878729" CDS 4577650..4578183 /locus_tag="PA4095" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252784.1" /db_xref="GeneID:878729" /translation="MPELATREFWKDLQPIPDCFKPDAKPEVYLRNAPTEDERLYVPF TETVKSRPLWISPSENRWCDILMATSAGLVNRHYHPHEVFAYTISGKWGYLEHDWTAT AGDFVYETPGEGHTLVAYEHEQPMRAFFIVKGPLVWLDEKGNADGIFDVHDYIAMCRE HYDKIGVGAAYIDSLFR" misc_feature 4577758..4578129 /locus_tag="PA4095" /note="2,4'-Dihydroxyacetophenone dioxygenase (DAD), cupin domain; Region: cupin_DAD; cd20302" /db_xref="CDD:380436" misc_feature order(4577806..4577811,4577818..4577820,4577836..4577838, 4577842..4577844,4577893..4577895,4577899..4577901, 4577905..4577907,4577911..4577913,4577950..4577952, 4577959..4577973,4577977..4577985,4578034..4578036, 4578052..4578054,4578058..4578060,4578082..4578084, 4578091..4578093,4578100..4578102) /locus_tag="PA4095" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:380436" misc_feature order(4577878..4577880,4577884..4577886,4577929..4577931, 4577992..4577994,4578037..4578039) /locus_tag="PA4095" /note="putative active site [active]" /db_xref="CDD:380436" gene 4578254..4579513 /locus_tag="PA4096" /db_xref="GeneID:878702" CDS 4578254..4579513 /locus_tag="PA4096" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_252785.1" /db_xref="GeneID:878702" /translation="MAHNNNSASYENVLLCVLFLTFGFVFFDRLALSFLFPFMEQELQ LSNSHLGMLSSVLALAWAVSGALVGAWSDRRGQRKPLLIVAVILFSLCSALSGLVGGF LSLLLFRGIMGLAEGPILPLSQSLMVEASSPHRRGLNMGLLQGSAAGLLGAVIGPPLL VALAEALGWRHAFIVSLLPGLLIAWLIWRHVRPDPPRAQRPAPRAEEAKGKRLALLKS RNILLCTLISCVFVTWFIVLISFTPTFLVNARGFSPATMGRLMSCLGVAWVVWGFAVP AISDRIGRRPTLVAFSLLAACCPLALLYAPNATSLGLLLLLTYTGLGCFTLFMATIPA ETVSRGVIATALGLIMGLGELVGGFLAPTVAGFAADRFGLSIVMWMSCGGALLAAFLS LFLRETAPAVLARQRSAPTSVLQGNQP" misc_feature 4578290..4579402 /locus_tag="PA4096" /note="Sugar phosphate permease [Carbohydrate transport and metabolism]; Region: UhpC; COG2271" /db_xref="CDD:441872" gene 4579510..4580568 /locus_tag="PA4097" /db_xref="GeneID:878703" CDS 4579510..4580568 /locus_tag="PA4097" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase" /protein_id="NP_252786.1" /db_xref="GeneID:878703" /translation="MKALRWHAARDLRLSELERQAPRPGEVELEVAYCGICGSDLHEY QSGPHSIPQAEAHPLSGCRAPLTLGHEFCGVVAALGPGVEGPRIGDRVAVEPEYRCGE CRYCREGRYNLCESMGFIGLMGDGGFAERARVPAYMLHRLPDAVGFRQAAVLEPAAVA LHALRRSSLAPGQRCAVFGLGPIGLLLVMLARLRGIEDIAAVDVSPERLALAGEFGAS RALDARDGDTAARLREGGALDCAFEAAGSQASLDAALASLRKGGELVLVSLMGEVRLD AFDLVNRELRLLGSVGYRDAYPELIALLADGRLDLARAVTRSVPLEQAVEHGFEALLR DKSQLKVLVNPNPALADA" misc_feature 4579510..4580538 /locus_tag="PA4097" /note="(2R,3R)-2,3-butanediol dehydrogenase; Region: butanediol_DH_like; cd08233" /db_xref="CDD:176195" misc_feature order(4579618..4579626,4579633..4579635,4579972..4579974, 4579984..4579986,4580044..4580061,4580116..4580121, 4580131..4580133,4580176..4580178,4580239..4580244, 4580248..4580250,4580317..4580322,4580377..4580385) /locus_tag="PA4097" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176195" misc_feature order(4579618..4579620,4579624..4579626,4579717..4579719, 4579972..4579974) /locus_tag="PA4097" /note="catalytic Zn binding site [ion binding]; other site" /db_xref="CDD:176195" gene 4580583..4581308 /locus_tag="PA4098" /db_xref="GeneID:878798" CDS 4580583..4581308 /locus_tag="PA4098" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_252787.1" /db_xref="GeneID:878798" /translation="MVFQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDA DGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGISRDREEYDLATFERV LRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSL ACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAF LCGPGASFVTGAVLAVDGGYLCA" misc_feature 4580607..4581299 /locus_tag="PA4098" /note="NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Lipid transport and metabolism]; Region: FabG; COG1028" /db_xref="CDD:440651" gene 4581393..4582697 /locus_tag="PA4099" /db_xref="GeneID:878799" CDS 4581393..4582697 /locus_tag="PA4099" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252788.1" /db_xref="GeneID:878799" /translation="MKTLRTLPALLCAGFLGLSAQAAEDSRSGPLAGFGERLQRHGVK THAQFWSLSLKNLDTGPRQHSFGNSGDLFLGADLDLATLAGLDGASLHIEETLFILDR GTGQPTGPSWQGAVGSYFGGAPLHNDIGANQLSLLTWQQQWLGGRLDSHLGRTNARRY FLIYNCETVVTCNDPIIDASTGILPPPYGAWGGYLKYRATPTLYLHAGAFESNPVDYL KKRHGLDFGTDDASGTSLLLGIGDKREESLDPYRSHYELNAYLNTANQVDPLTGASDH GSAGGFFKFQQLFWRADGGRLDSPRALGLFGSLSVSADDKQPFRHFAELGLTYHAPFD RTRDKLNLKASYLRLNDHQLEFQRQARIAAGGDAKLGQRDVYALETNAHIALTPHIAL EPSVQYIFNPDNYYNPGARELSGDGFVVGLQLMVDMGSLLGL" misc_feature 4581396..4582673 /locus_tag="PA4099" /note="Carbohydrate-selective porin OprB [Cell wall/membrane/envelope biogenesis]; Region: OprB; COG3659" /db_xref="CDD:442876" gene 4582852..4584531 /locus_tag="PA4100" /db_xref="GeneID:878751" CDS 4582852..4584531 /locus_tag="PA4100" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="dehydrogenase" /protein_id="NP_252789.1" /db_xref="GeneID:878751" /translation="MTSTARRSFDYIVVGAGSAGCVLANRLSADPAVSVCLVEAGPSD RTPLPAAYIRTPAGIIRLIANPKWNWMHRFAAQPGTANQPIACPRGKVWGGSSAINGM IYIRGDRHDYDRWASLGNRGWSYDELLPYFRRSEHFEPGESPWHGRGGELNVAAQRSP GPINQVFFQAAEEMGWPYNADFNGERQEGIGPFHVTQVNGERCSAARAFLHPALARPN LTVLSSALTLRVLLEGTRATGVEISQAGAVVQLQARREVILSAGSINSPQLLLLSGIG PAAELARHGIVQRHELPGVGENLQDHQDIVLMYRTEAKLGYGLGFSPKGWLPLLRSPW QYLFGRRGALTSNTVESGGFLRLDPQAETPELGLIVAPALKNQPQRLVPFGHGVSLHV AVMHPQSRGRVRLNSPDPHDRPLIEANFLSHPADLDTLVQGFQLVRKLAASRSFARHL KGELVPGPQVSSRGQIEAWIRANLGTVFHPVGTCKMGHDQLAVVDDQLRVHGLQGLRV ADASIMPTLITGNTNAPAIMIGEKAADLILGKPAPHAPPARQPAVQALAGA" misc_feature 4582864..4584477 /locus_tag="PA4100" /note="Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Region: BetA; COG2303" /db_xref="CDD:441878" gene 4585149..4585889 /gene="bfmR" /locus_tag="PA4101" /db_xref="GeneID:878752" CDS 4585149..4585889 /gene="bfmR" /locus_tag="PA4101" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein BfmR" /protein_id="NP_252790.1" /db_xref="GeneID:878752" /translation="MEHVDHILIVDDDREIRELVGNYLKKNGLRTTIVADGRQMRAFL EANTVDLIVLDIMMPGDDGLLLCRELRVGKHKATPVLMLTARNDETDRIIGLEMGADD YLTKPFSARELLARINAVLRRTRMLPPNLTVSESSRLIGFGQWQLDTSARHLLDDAGT VVALSGAEYRLLRVFLDHPQRVLSRDQLLNLTQGREADIFDRSIDLLVSRLRQRLGDD AREPEYIKTVRSEGYVFSLPVRLVEAHP" misc_feature 4585149..4585853 /gene="bfmR" /locus_tag="PA4101" /note="osmolarity response regulator; Provisional; Region: ompR; PRK09468" /db_xref="CDD:181883" gene 4585886..4587190 /gene="bfmS" /locus_tag="PA4102" /db_xref="GeneID:878756" CDS 4585886..4587190 /gene="bfmS" /locus_tag="PA4102" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein BfmS" /protein_id="NP_252791.1" /db_xref="GeneID:878756" /translation="MKLAVPRPRSLAARLALILFAGLVLAYGLSFASQFYERYQTAKH MMLDSLEQDVAISVAMLDRLTPAEREAWLPRLERRTYRYRLDAGEPGQPLALADAPVA AHSIERALDGQYPLTLRTVADSRPHFQVLLRLRDGSPLTIDVTPAPVPLSGWLPLVLL VQLLLLLLCTGLAVRTAIGPLTRLVKAVEHLDPNRPAQPLAETGPREVAHAAAAFNAM QARIADYLKERMQLLAAISHDLQTPITRMKLRVEFMDASSDRDKLWNDLEEMQHLVRE GVAYARSMHGSTETSCRVDLDAFLDSLVFDYQDSGKQVQLDGRTGAVIDTRPHALRRV LVNLVDNALKFAGAARLEVERRTDGGTRIQVLDNGPGIPAEELDEVLKPFYRVENSRN RDTGGTGLGLAIAQQLSLALGGRLTLANRAGGGLCARIELDP" misc_feature 4586267..4587181 /gene="bfmS" /locus_tag="PA4102" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: BaeS; COG0642" /db_xref="CDD:440407" misc_feature 4586876..4587184 /gene="bfmS" /locus_tag="PA4102" /note="Histidine kinase-like ATPase domain; Region: HATPase; cl00075" /db_xref="CDD:469604" misc_feature order(4586894..4586896,4586906..4586908,4586915..4586917, 4586978..4586980,4586984..4586986,4586990..4586992, 4586996..4586998,4587080..4587091,4587137..4587139, 4587143..4587145,4587158..4587163,4587167..4587169) /gene="bfmS" /locus_tag="PA4102" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:340426" misc_feature order(4587026..4587028,4587089..4587091) /gene="bfmS" /locus_tag="PA4102" /note="ATP-lid; other site" /db_xref="CDD:340426" gene 4587320..4587949 /locus_tag="PA4103" /db_xref="GeneID:878757" CDS 4587320..4587949 /locus_tag="PA4103" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252792.1" /db_xref="GeneID:878757" /translation="MTVPTSQSAWHGWRLFAVLAVAVLCMTALVLALQAQPVEGLRSA IRATARSSFALFLAAFLASSLATLVPGPGTRALLRERRYLGLAFAFSHAVHALLILAY WKLFPETFWSGRSVAANIPGSIGYLFILLLTLTSFRTPARLLGPRAWKALHSTGTWVL AGIFCLSFFKRIPMGGWYVLAFATIFSAIVLKLTAKLAVRLRRRDVQPA" gene 4587981..4588490 /locus_tag="PA4104" /db_xref="GeneID:878007" CDS 4587981..4588490 /locus_tag="PA4104" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252793.1" /db_xref="GeneID:878007" /translation="MQASDLRAWRRPFALLDRCGGWSADLSLRLFLAWEFFESGWEKW NGENWFGDIQSAFPFPFDRLPAAFNWELSLWAELLGALFLLLGLGTRLTALVLIVVTL VATAAVHWPAEWSSLAELARGYSITDHGFGNFKLPAIYLAALLPLLLAGAGKLSLDHW LGRRLGLSR" misc_feature 4588050..4588310 /locus_tag="PA4104" /note="Region: DoxX; pfam07681" /db_xref="CDD:429591" gene complement(4588743..4589498) /locus_tag="PA4105" /db_xref="GeneID:878008" CDS complement(4588743..4589498) /locus_tag="PA4105" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252794.1" /db_xref="GeneID:878008" /translation="MDERLRQQQFSLARHLRDPLGNAPPPDIEERRLRVYRELFYNAI EGLLASGFPRLRGLLGEQQWHGLVREFYREERSHTPLFTRIAGVFVDYLRQRGEYRPA WQAELAHFEWSETRLYLAEPDDPPYRREGDLLDGVPLLSSLALPLGYRWPVHRLEEDV ALAEAPAEPTLLLMHRDSSHRVHTARLTPLACRLLESLARRRLSGREHLAALALEARS APGALDAAGLELLAALRTQGVVLGTLERDWAGG" misc_feature complement(4588770..4589486) /locus_tag="PA4105" /note="Uncharacterized conserved protein, DUF2063 family [Function unknown]; Region: COG3219" /db_xref="CDD:442452" gene complement(4589491..4590321) /locus_tag="PA4106" /db_xref="GeneID:877737" CDS complement(4589491..4590321) /locus_tag="PA4106" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252795.1" /db_xref="GeneID:877737" /translation="MTLIDNAAGLGLRRGLLPQLLAMAPGAVDFLECAPDNWIGVGGA FGADLERLVERIPLTCHGLSLSLGGSTPLDAAFIEQTRRFLVRHRVALYSEHLSYCSD DGHLYDLLPLPFTEAAVRHVAARIREAQERLERRIAVENISYYAAPYREMSEIEFVNA VLDEADCDLLLDVNNLFVNACNHGYDALDFLVRLPPGRVAAYHVAGHYDEAPDLKIDT HGAAVKPGVWALLGAAYRRFGVRPTLLERDFNYPPLGELLLEVEQIRQWQRDEGRRHG " misc_feature complement(4589494..4590321) /locus_tag="PA4106" /note="hypothetical protein; Provisional; Region: PRK05409" /db_xref="CDD:235447" gene complement(4590396..4590863) /locus_tag="PA4107" /db_xref="GeneID:877738" CDS complement(4590396..4590863) /locus_tag="PA4107" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252796.1" /db_xref="GeneID:877738" /translation="MSVFDSRQKTSASLLGAVLVGGMLLGGSAFAVEPLGQGLQVAAA SAGEGKCGEGKCGSGGSAKTPAKAGAEGKCGEGKCGDASFARTDTDHDGKVSRAEFLA VAKDRAGEFDSIDSDHDGFISEAEAYEHLRKTYEANGKPMPAGLFSKLEQGQH" misc_feature complement(4590624..4590845) /locus_tag="PA4107" /note="Uncharacterized low-complexity protein [Function unknown]; Region: COG3767" /db_xref="CDD:442981" misc_feature complement(4590447..>4590614) /locus_tag="PA4107" /note="Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]; Region: FRQ1; COG5126" /db_xref="CDD:444056" gene 4591187..4592431 /locus_tag="PA4108" /db_xref="GeneID:877982" CDS 4591187..4592431 /locus_tag="PA4108" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="cyclic di-GMP phosphodiesterase" /protein_id="NP_252797.1" /db_xref="GeneID:877982" /translation="MLKRIPVTQLRLGMFVQSLCGSWLDHPFWKRGGFLLDSQADLQR LRESAVKEVWIDASKGLDLPEEAAVSAAAVLPVTMPAGPSPARVALEEEIRHAALLCS RAKAAVVSMFRDARMGQAIDTAHASDLVDEISASVLRHPNALLSLVRLKTSDEYTYMH SVAVCALMIALARQLELPDPLVREAGLAGLLHDIGKMAVPDPILNKPGKLTDPEFGLV RRHPQNGARMLLDCRQVSALVVDVCLHHHERIDGTGYPFGLAQEQISLLARMGAVCDV YDAITSDRPYKKGWNAAEAIRRMAEWNGHFDPQVFRAFVKAVGIYPVGALVRLESGRL GVVLEQHGRSLLTPRVKVFFSARSKVPIPQQVVDLGRAGQTDRIVGFEPAEAWNFRNL DEMWTGLAKSTGSYFDAGTGNP" misc_feature 4591190..4591564 /locus_tag="PA4108" /note="Domain of unknown function (DUF3391); Region: DUF3391; pfam11871" /db_xref="CDD:432148" misc_feature <4591490..4592173 /locus_tag="PA4108" /note="HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant) [Signal transduction mechanisms]; Region: HDGYP; COG2206" /db_xref="CDD:441808" gene 4592752..4592973 /locus_tag="PA4108a" /db_xref="GeneID:17373381" CDS 4592752..4592973 /locus_tag="PA4108a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719775.1" /db_xref="GeneID:17373381" /translation="MLESEIVAARRAYAASLGVTLSGAISNADEPVHIRHAVSNSNHN PNASNRINLGRARAYKKRREEGDYFFIDT" gene complement(4592990..4593880) /gene="ampR" /locus_tag="PA4109" /db_xref="GeneID:877983" CDS complement(4592990..4593880) /gene="ampR" /locus_tag="PA4109" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator AmpR" /protein_id="NP_252798.1" /db_xref="GeneID:877983" /translation="MVRPHLPLNALRAFEASARHLSFTRAAIELCVTQAAVSHQVKSL EERLGVALFKRLPRGLMLTHEGESLLPVLCDSFDRIAGLLERFEGGHYRDVLTVGAVG TFTVGWLLPRLEDFQARHPFIDLRLSTHNNRVDIAAEGLDYAIRFGGGAWHGTEALAL FEAPLTVLCCPEVAAQLHSPADLLQHTLLRSYRADEWPLWFQAAGLPAHAPLTRSIVF DTSLAMLEAARQGVGVALAPAAMFARQLASESIRRPFATEVSTGSYWLTRLQSRGETS AMLAFRGWLLEMAAVEARGR" misc_feature complement(4593680..4593859) /gene="ampR" /locus_tag="PA4109" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(4593026..4593598) /gene="ampR" /locus_tag="PA4109" /note="The C-terminal substrate-domain of LysR-type transcriptional regulators for beta-lactamase genes, contains the type 2 periplasmic binding fold; Region: PBP2_LTTR_beta_lactamase; cd08484" /db_xref="CDD:176173" misc_feature complement(order(4593494..4593514,4593518..4593571, 4593575..4593598)) /gene="ampR" /locus_tag="PA4109" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176173" misc_feature complement(order(4593158..4593160,4593218..4593226, 4593569..4593571,4593575..4593580)) /gene="ampR" /locus_tag="PA4109" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176173" protein_bind 4593883..4593896 /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" gene 4594029..4595222 /gene="ampC" /locus_tag="PA4110" /db_xref="GeneID:878149" CDS 4594029..4595222 /gene="ampC" /locus_tag="PA4110" /EC_number="3.5.2.6" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="beta-lactamase" /protein_id="NP_252799.1" /db_xref="GeneID:878149" /translation="MRDTRFPCLCGIAASTLLFATTPAIAGEAPADRLKALVDAAVQP VMKANDIPGLAVAISLKGEPHYFSYGLASKEDGRRVTPETLFEIGSVSKTFTATLAGY ALTQDKMRLDDRASQHWPALQGSRFDGISLLDLATYTAGGLPLQFPDSVQKDQAQIRD YYRQWQPTYAPGSQRLYSNPSIGLFGYLAARSLGQPFERLMEQQVFPALGLEQTHLDV PEAALAQYAQGYGKDDRPLRVGPGPLDAEGYGVKTSAADLLRFVDANLHPERLDRPWA QALDATHRGYYKVGDMTQGLGWEAYDWPISLKRLQAGNSTPMALQPHRIARLPAPQAL EGQRLLNKTGSTNGFGAYVAFVPGRDLGLVILANRNYPNAERVKIAYAILSGLEQQGK VPLKR" misc_feature 4594038..4595192 /gene="ampC" /locus_tag="PA4110" /note="beta-lactamase/D-alanine carboxypeptidase; Provisional; Region: ampC; PRK11289" /db_xref="CDD:236894" gene 4595287..4595685 /locus_tag="PA4111" /db_xref="GeneID:877888" CDS 4595287..4595685 /locus_tag="PA4111" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252800.1" /db_xref="GeneID:877888" /translation="MSASPPLRQPCPPGACVCERERLEAPGADRRILLLTRQEEQRLA ARLEALRSLEDLEHLLRRMEEQLGIRLRIAPAFGEVRSMRGIRMRFEEQPGLCRKTRQ AIPAAIRRGLEKRPEVAYALLNAHDLLRDA" gene complement(4595849..4600102) /locus_tag="PA4112" /db_xref="GeneID:877889" CDS complement(4595849..4600102) /locus_tag="PA4112" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sensor/response regulator hybrid protein" /protein_id="NP_252801.1" /db_xref="GeneID:877889" /translation="MNVQQSKFRLSRWAGATLALGLLLSGLGAWGLALVNEQQARMAL EREAELLAEAVTRRVELYQYGLRGVRGALLTAGEVHIDRELFRRYSLTRDIDREFPGA RGFGFIRRVAAADEAGFLRQARADGQPEFRIQQLTPHDGERYVIQYIEPVARNGQALG LDIASEANRREAARAALETGQVRLTGPITLVQASGLRQQSFLILMPIYRSGITPPPGP QRELEGFGWSYAPLLTGEVLAGLPIDNAAIHLELSDVTGDGAAVPFFVNGAAAPAQRL FGHMLRREIYGRHWQMAFSALPLFVQRLHQPSPRILFLAGSLVSLLLAALVNASALGR LRRRREAATQARLAAIVGNSADGIIGVGLDGVISDWNRGAEALFGYREEQAVGRRVVD LLVPPSKENEELDILARIARKEQVVSFDTVRRHQDGHLLDVAVTVSPILGPDGGVVGA SKTVRDISAKKAAEARIRELNTGLEHQIAERTAELRRLNVLLGSVLQAASEVSIITLD RDGIISGFNLGAERMLGYRADEVVGKASPTLLHSERELLARGQELGEEGFRVLVARAE QEGAETREWTYLRKDGSPLSVTLSVTVLRDEAGAINGYLGIAVDVTEWRNAEREMAAA RDQLQMAADVARLGIWRWNLADDSLQWNERMCEMYGQPLALRDGGLVYEHWRSRLHPE DLERTEASLRAAVEGRGNYDVIFRVVLPDGGIRFIQAGAQVERDADGNPLQVTGINID ITSDQQLQARLREAKEQADAASAAKSSFLANMSHEIRTPMNAVLGMLQLARQTDLNER QRDYLDKASSAATSLLGLLNDILDYSKIEAGKLVLEMLPFELEPLMQDLAVVLSGNQG DKDVEVIFDIDPELPSAVVGDRLRLQQILINLAGNALKFTARGHVLVSLRRLAHDAHL VRLRVLVADTGIGISAEQQQRIFEGFTQAEASTSRRFGGTGLGLFICKRLVDLMGGEL RVESAPGSGSRFWFDLDLDVAHDQPLRAACPGAGEPLRLLVADDNLVAGELLERTVGA LGWRADCVGSGSEAVARVQAAMAEGRRYDVVLMDWRMPDLDGLSAAQLIRQLQGDLPP PMVIMITAYGREVLADARDHSAPPFVDFLTKPVTPKQLADSVLHALHGEQGAPANPPP RPVERTQRLRGVRLLVVEDNALNRQVAAELLSSEGARVALADGGLAGVQQVLEASVPF DAVLMDMQMPDIDGLEATRRIRADGRFAGLPILAMTANASLADREACLAAGMNDHVAK PIDKERLVLCLLGHLGRSGARGAPATAADAGELVEARGDIVGRFGGSLELIVQVLRRF VPDMQDLFAQLERQLGEGDVQGSAATLHTIKGSASTVGASALAGRASELEQALRRADP LRGMEILAGIRLDELRTLCDACLLRLQAMFGDVQAESAS" misc_feature complement(4598342..4599997) /locus_tag="PA4112" /note="Extracytoplasmic sensor domain CHASE1 (specificity unknown) [Signal transduction mechanisms]; Region: CHASE1; COG3614" /db_xref="CDD:442832" misc_feature complement(4597850..4598665) /locus_tag="PA4112" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature complement(4595966..>4597792) /locus_tag="PA4112" /note="hybrid sensory histidine kinase BarA; Provisional; Region: PRK11107" /db_xref="CDD:236848" gene complement(4600230..4601420) /locus_tag="PA4113" /db_xref="GeneID:880871" CDS complement(4600230..4601420) /locus_tag="PA4113" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sugar efflux transporter" /protein_id="NP_252802.1" /db_xref="GeneID:880871" /translation="MDSTSETRSGSWLSVIALALAAFIFNTTEFVPVGLLSDIGHSFE MPTSQVGLMLTIYAWVVSLASLPMMLLTRNIERRKLLVGVFLLFIASHVLSGLAWSFQ VLMLSRIGIAFAHAVFWAITASLAVRVAPPGQQAKALGLLATGTTLAMVLGIPLGRVV GEALGWRTTFMAIAGLSVLTLLYLARSLPLLPSQNSGSLRSLPMLFRRPALVCLYVLT VVVISAQFTAYSYIEPFAKQVAQMSGEATTLLLLLFGGAGIFGSILFSRYSEAFPRGF LLAAILALGSSLALLLPLSAQPTWLMALSLLWGMSIMCFGLAQQSRVLRLASDATDVA MALFSGLYNVGIGAGALLGSVVSERMGLASIGNVGAALALAGLLLALFAALRYAEALK STSL" misc_feature complement(4600242..4601408) /locus_tag="PA4113" /note="putative arabinose transporter; Provisional; Region: PRK03545" /db_xref="CDD:179591" misc_feature complement(order(4600383..4600385,4600392..4600397, 4600404..4600409,4600416..4600418,4600461..4600463, 4600473..4600475,4600485..4600490,4600635..4600637, 4600647..4600649,4600731..4600733,4600740..4600748, 4600755..4600760,4600767..4600769,4600971..4600973, 4600980..4600985,4600992..4600994,4601052..4601054, 4601061..4601069,4601073..4601078,4601226..4601228, 4601322..4601324,4601331..4601336,4601343..4601348)) /locus_tag="PA4113" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340882" gene complement(4601574..4602083) /locus_tag="PA4114" /db_xref="GeneID:880872" CDS complement(4601574..4602083) /locus_tag="PA4114" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="spermidine acetyltransferase" /protein_id="NP_252803.1" /db_xref="GeneID:880872" /translation="MIELRTITRDDWETCIDLKVARHQAHFVASNLYSLAQSRFLPGF RAVGIHHGGRMVGFALYGPDADDGHYWLYRLMIDRRYQGKGHGRAALQRIIASVRRTR RRSDRLMVAYAVDNDVARQLYRDAGFVEQGLAPWGETMACLMLPEPSHRSGKVAGAPG GRAAHGVPA" misc_feature complement(4601679..4601915) /locus_tag="PA4114" /note="Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]; Region: RimI; COG0456" /db_xref="CDD:440224" gene 4602503..4603888 /locus_tag="PA4115" /db_xref="GeneID:879777" CDS 4602503..4603888 /locus_tag="PA4115" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252804.1" /db_xref="GeneID:879777" /translation="MSHRPVINASVSPKGTLETLSQREVQQLSETANGKTYQLFRQCA LAILNTGAHSDNAKTILDAYKDFEVRIHQQDRGVRLELINAPADAFVDGEMIASTREM LFSALRDIVYTQSGLDSQHVDLDSSQGLTDYVFQLLRNARTLRPGVEPKIVVCWGGHS ISSEEYKYTKRVGHELGLRSLDVCTGCGPGVMKGPMKGATISHAKQRIVGGRYLGLTE PGIIAAEAPNPIVNELVILPDIEKRLEAFVRVGHGVIIFPGGAGTAEEFLYLLGILMH PDNQDLPFPVILTGPRSAEAYLQQLHEFVGATLGHAAQRHYRIVIDDPAEVAKQMAQG LKEVKQFRRERNDAFHFNWMLKIDESFQRPFEPTHENMASLQLSRSLPPHELAANLRR AFSGIVAGNVKDNGIRMIEQYGPYEIHGDPAVMLPLDRLLQAFVKQHRMKLPGGAAYV PCYRVVQTEAA" misc_feature 4602524..4603870 /locus_tag="PA4115" /note="nucleotide 5'-monophosphate nucleosidase PpnN; Region: Nsidase_PpnN; NF038390" /db_xref="CDD:468501" gene 4604006..4604593 /gene="bphO" /locus_tag="PA4116" /db_xref="GeneID:879778" /db_xref="PseudoCap:PA4116" CDS 4604006..4604593 /gene="bphO" /locus_tag="PA4116" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="heme oxygenase BphO" /protein_id="NP_252805.1" /db_xref="GeneID:879778" /db_xref="PseudoCap:PA4116" /translation="MSPSPSPALAALRDATRDLHAELDRRSPLGDDDLDDRAYLDHAG RILGWLEPLERALRDNRSGWPAALRADARLVKSTWLESDLLAGGMSRAQVEALPRCAD LPNATRAAEVFGVAYVMEGATLGGAYLYKRLAPRLPGLPLQWLQGYGQATGVRWQEFL EQLARQIDSPEAIGLAQDAAQATFLSFRRWVLDEA" misc_feature 4604021..4604584 /gene="bphO" /locus_tag="PA4116" /note="Heme oxygenase; Region: Heme_oxygenase; pfam01126" /db_xref="CDD:395895" misc_feature order(4604042..4604044,4604063..4604065,4604072..4604077, 4604354..4604359,4604366..4604371,4604375..4604380, 4604387..4604392,4604471..4604473,4604555..4604557, 4604564..4604566) /gene="bphO" /locus_tag="PA4116" /note="heme binding site [chemical binding]; other site" /db_xref="CDD:350857" misc_feature 4604333..4604413 /gene="bphO" /locus_tag="PA4116" /note="kinked helix [structural motif]; Region: kinked helix" /db_xref="CDD:350857" protein_bind 4604597..4604612 /experiment="ChIP-chip [PMID: 19682264]" /experiment="ChIP-PCR [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA4117" /bound_moiety="LasR" gene 4604621..4606807 /gene="bphP" /locus_tag="PA4117" /db_xref="GeneID:880365" /db_xref="PseudoCap:PA4117" CDS 4604621..4606807 /gene="bphP" /locus_tag="PA4117" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="phytochrome BphP" /protein_id="NP_252806.1" /db_xref="GeneID:880365" /db_xref="PseudoCap:PA4117" /translation="MTSITPVTLANCEDEPIHVPGAIQPHGALVTLRADGMVLAASEN IQALLGFVASPGSYLTQEQVGPEVLRMLEEGLTGNGPWSNSVETRIGEHLFDVIGHSY KEVFYLEFEIRTADTLSITSFTLNAQRIIAQVQLHNDTASLLSNVTDELRRMTGYDRV MAYRFRHDDSGEVVAESRREDLESYLGQRYPASDIPAQARRLYIQNPIRLIADVAYTP MRVFPALNPETNESFDLSYSVLRSVSPIHCEYLTNMGVRASMSISIVVGGKLWGLFSC HHMSPKLIPYPVRMSFQIFSQVCSAIVERLEQGRIAELLRVSTERRLALARRARDADD LFGALAHPDDGIAALIPCDGALVMLGGRTLSIRGDFERQAGNVLQRLQRDPERDIYHT DNWPQPSEDSPDGGDCCGVLAIRFHRQESGWIFWFRHEEVHRIRWGGKPEKLLTIGPS GPRLTPRGSFEAWEEVVRGHSTPWSETDLAIAEKLRLDLMELCLNHAAEVDRMRQRLI AVLGHDLRNPLQSISMAAALLSSSDTRTTELRQHISASSSRMERLVSQILDMSRLQSG IGLTVNPVDTDVSQLVRQIVCETDVAYPGLVIEIAIDPQVRAVVDPDRYAQVAANLLS NARHHGLPGRPVLVTLTRQGDEVCLSVLNETSGLSEAQLANLFEPFKRESADNQRNRN GLGIGLYISQAIAQAHQGRIDVDCRDDVITFCLRLPVRQAETGSSS" misc_feature 4604654..4604953 /gene="bphP" /locus_tag="PA4117" /note="PAS fold; Region: PAS_2; pfam08446" /db_xref="CDD:400652" misc_feature 4605035..>4605457 /gene="bphP" /locus_tag="PA4117" /note="Domain present in phytochromes and cGMP-specific phosphodiesterases; Region: GAF; smart00065" /db_xref="CDD:214500" misc_feature 4605626..4606099 /gene="bphP" /locus_tag="PA4117" /note="Phytochrome region; Region: PHY; pfam00360" /db_xref="CDD:425635" misc_feature 4606109..4606786 /gene="bphP" /locus_tag="PA4117" /note="K+-sensing histidine kinase KdpD [Signal transduction mechanisms]; Region: KdpD; COG2205" /db_xref="CDD:441807" gene 4606885..4607454 /locus_tag="PA4118" /db_xref="GeneID:880366" CDS 4606885..4607454 /locus_tag="PA4118" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252807.1" /db_xref="GeneID:880366" /translation="MPRLRLRTVLACLAVFCATPALARVEVHSLQHKSMGRVLTVRVS EEIAPGDYETLLKGLRNNPGTYSRKLLLLNSIGGSVPEAIRMGRLLRESGFDALVPSS SVCQGTCVYLLAAGKRKTVRGYVGLHRPYYAHGDSLHSRSANGMRYDSAAYFREMDIP STLVQAMQSTDPKRMRVLSAKELAQYRLN" misc_feature 4606900..4607448 /locus_tag="PA4118" /note="Predicted periplasmic protein [Function unknown]; Region: COG3904" /db_xref="CDD:443110" gene complement(4607578..4608384) /gene="aph" /locus_tag="PA4119" /db_xref="GeneID:880226" CDS complement(4607578..4608384) /gene="aph" /locus_tag="PA4119" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="aminoglycoside 3-N-acetyltransferase" /protein_id="NP_252808.1" /db_xref="GeneID:880226" /translation="MHDAATSMPPQAPSTWADYLAGYRWRGQGEGCSAATVHRLEAAR RPTLFVKQEVLSAHAELPAEIARLRWLHGAGIDCPQVLNETQSDGRQWLLMSAVPGDT LSALAQRGELEPERLVRLVAAALRRLHDLDPAACPFDHRLERRLDTVRQRVEAGLVDE ADFDDDHRGRSATELYRLLLDRRPAVEDLVVAHGDACLPNLLAEGRRFSGFIDCGRLG VADRHQDLALAARDIEAELGAAWAEAFLVEYGGDIDGERLAYFRLLDEFF" misc_feature complement(4607581..4608360) /gene="aph" /locus_tag="PA4119" /note="Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]; Region: Aph; COG3231" /db_xref="CDD:442463" gene complement(4608436..4609347) /locus_tag="PA4120" /db_xref="GeneID:880227" CDS complement(4608436..4609347) /locus_tag="PA4120" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252809.1" /db_xref="GeneID:880227" /translation="MPERQPIPNINIGQVYDQRYADAEVHYDALGNLAGFFGRNMPAH RHDRFFQVHYVKNGAVRVYLDERQYLESGPMFFLTPPTVPHAFVTEADADGHVLTVRQ QLVWSLTEAEPGLAPGPQVAPACVALGNLEGGAAEEAARLALLFEQLRSESMASRSGR QQALLALTRLVMISLLRLSANSVAARPMRHEDLQIFQRFNALIEERYAEHWPLSLYAS RIGVTEARLNDVCRRIADLPSKRLVYERLMQESKRLLLFTGGSVNEICYQLGFKDPAY FSRFFVRYAGLTPSAYRQRQADGESRR" misc_feature complement(4608463..4609332) /locus_tag="PA4120" /note="4-hydroxyphenylacetate catabolism regulatory protein HpaA; Region: HpaA; TIGR02297" /db_xref="CDD:131350" protein_bind complement(4609040..4609052) /locus_tag="PA4120" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 4609057..4609069 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4609567..4610226 /locus_tag="PA4121" /db_xref="GeneID:880079" CDS 4609567..4610226 /locus_tag="PA4121" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252810.1" /db_xref="GeneID:880079" /translation="MSRALNDVAAGTLFGVALNYKGLLDSRLPEFQQPPYQKPPVKPV LFIKTPNTRNEHDAPVLFPRGVERLQPGPALGVVIARDASRVKEEEAMAHVAGYVIVN EFSLPEDSYYRPAVKAKCRDGFCPLGPQLVPVQEIVDPHALELKLYVNGELRQRNNTA NLVRDIPRLIAEISEFMTLHAGDVLITGTPEGRVDVHPGDRVEVEIDGLGRLANSIVA E" misc_feature 4609597..4610214 /locus_tag="PA4121" /note="4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit; Region: HpaG-N-term; TIGR02305" /db_xref="CDD:131358" gene 4610237..4611016 /locus_tag="PA4122" /db_xref="GeneID:880080" CDS 4610237..4611016 /locus_tag="PA4122" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252811.1" /db_xref="GeneID:880080" /translation="MKHARIRYQGRVHQVTVEDANAVRLADGTLLAEDRVEWLPPATG SMFALGLNYADHAAELSFKAPSEPLAFLKSPGTYTGHRQVSWRPDNVDYMHYECELVA VIGKPARNVRREDALGYLAGYTVCNDYAIRDYLENYYRPNLRVKNRDATTPVGPWIVD AAEVPEPNRLTLRTWVNGELRQEGSTADMIFDIPYLIEYFSSFMTLQPGDMIATGTPE GLSDVVPGDEVVVEVEGVGRLVNRIVSEAEFFRARAQEHAE" misc_feature 4610240..4610974 /locus_tag="PA4122" /note="4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit; Region: HpaG-C-term; TIGR02303" /db_xref="CDD:131356" gene 4611013..4612473 /gene="hpcC" /locus_tag="PA4123" /db_xref="GeneID:880100" CDS 4611013..4612473 /gene="hpcC" /locus_tag="PA4123" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase" /protein_id="NP_252812.1" /db_xref="GeneID:880100" /translation="MIKHWINGREVESKDVFENYNPATGELIGEVASGGAAEIDAAVA AAREAFPKWANTPAKERARLMRRLGELIDRNVPHLAELETLDTGLPIHQTKNVLIPRA SHNFEFFAEVCTRMNGHSYPVDDQMLNYTLYQPVGVCGLVSPWNVPFMTATWKTAPCL ALGNTAVLKMSELSPLTANELGRLVHEAGIPPGVFNVVQGYGASAGDALVRHRDVRAV SFTGGTATGRRIMEAAGIKKYSMELGGKSPVLVFEDADLERALDAALFTIFSLNGERC TAGSRIFVQESVYPQFVAEFAARARRLIVGDPQDPKTQVGSMITQAHYDKVTGYIRIG LEEGATLVAGGLERPAGLPAHLSKGQFIQPTVFADVDNRMRIAQEEIFGPVVCLIPFK DEAEALRLANDVEYGLASYIWTQDIGKAHRLARGIEAGMVFINSQNVRDLRQPFGGVK ASGTGREGGEYSFEVFAEIKNVCISMGSHHIPRWGV" misc_feature 4611067..4612434 /gene="hpcC" /locus_tag="PA4123" /note="Human aldehyde dehydrogenase family 8 member A1-like; Region: ALDH_F8_HMSADH; cd07093" /db_xref="CDD:143412" misc_feature order(4611439..4611447,4611463..4611465,4611517..4611519, 4611523..4611528,4611616..4611618,4611628..4611633, 4611673..4611681,4611688..4611690,4611697..4611699, 4611736..4611741,4611838..4611840,4612150..4612152, 4612156..4612158,4612348..4612350) /gene="hpcC" /locus_tag="PA4123" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:143412" misc_feature order(4611448..4611450,4611736..4611738,4611829..4611831, 4611838..4611840) /gene="hpcC" /locus_tag="PA4123" /note="catalytic residues [active]" /db_xref="CDD:143412" gene 4612605..4613528 /gene="hpcB" /locus_tag="PA4124" /db_xref="GeneID:880101" CDS 4612605..4613528 /gene="hpcB" /locus_tag="PA4124" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="homoprotocatechuate 2,3-dioxygenase" /protein_id="NP_252813.1" /db_xref="GeneID:880101" /translation="MGKVALAAKITHVPSLYLSELPGPRHGCRQPAIDGHREIGRRCR ELGVDTIVVFDTHWLVNAGYHINCAPHFEGLYTSNELPHFIANMEYGFPGNPELGRIL AEGCNALGVETLAHDATTLGPEYGTLVPMRYMNQDRHFKVVSVSALCTVHYLNDSARL GWAMRKAVEEHYDGTVAFLASGSLSHRFAQNGQAPDFSDRIWSPFLEVLDHEVVQMWQ EGRWAEFCGMLPEYASKGHGEGFMHDTAMLLGALGWSAYDGKAEVVTPYFGSSGTGQI NAVFPVTAQDGSAIPAAQAGNPAGASCASRL" misc_feature 4612611..4613450 /gene="hpcB" /locus_tag="PA4124" /note="The Class III extradiol dioxygenase, homoprotocatechuate 2,3-dioxygenase, catalyzes the key ring cleavage step in the metabolism of homoprotocatechuate; Region: HPCD; cd07370" /db_xref="CDD:153382" misc_feature order(4612638..4612646,4612773..4612775,4612977..4612979, 4613160..4613162,4613325..4613327,4613418..4613423) /gene="hpcB" /locus_tag="PA4124" /note="putative active site [active]" /db_xref="CDD:153382" misc_feature order(4612638..4612640,4612773..4612775) /gene="hpcB" /locus_tag="PA4124" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:153382" gene 4613539..4613931 /gene="hpcD" /locus_tag="PA4125" /db_xref="GeneID:878649" CDS 4613539..4613931 /gene="hpcD" /locus_tag="PA4125" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="5-carboxymethyl-2-hydroxymuconate isomerase" /protein_id="NP_252814.1" /db_xref="GeneID:878649" /translation="MPHFIAEYTDNIEAEADLPGLFEKVHACLGASGVFPLGGIRSRG VRLDTWRMADGRHDYAFVHMTLKVGAGRDLETRRQVAEALFEVITAHFAELQARRLLA LSFELTELDAELNYKRNNVHEFLNNPAD" misc_feature 4613542..4613913 /gene="hpcD" /locus_tag="PA4125" /note="5-carboxymethyl-2-hydroxymuconate isomerase; Region: CHMI; pfam02962" /db_xref="CDD:427080" gene 4614024..4615328 /locus_tag="PA4126" /db_xref="GeneID:878650" CDS 4614024..4615328 /locus_tag="PA4126" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_252815.1" /db_xref="GeneID:878650" /translation="MSTASTLNSTTLPLSDSTHDRVTWRLMPLLLVCYVFAHLDRINI GFAKLQMSADLHFSDTVYGLGAGLFFIAYALFGLPSNLMLERIGPRRWIACLMLVWGC LSTAMLLVETARGFYLLRFLLGVAEAGFFPGILVYLNRWFPARRRGQITALFAIAVPM AGVIGGPLSGWILEGFHDALGLRGWQWMFLIEGLPVVLLGVVVWCSLPESFERVTWLS DEQKHLLREELAGEEQRKTITSFSGIFSNPQVWLLVAIYFAVMLAVNTIAFWMPSLIH GAGIAQDSRIGMLSAVPYLAGCAFMIFIGRSSDRLRERRWHLGIPLLMAAAGLSLAAL APTSAWLVMGGLVIAGMGASAALPMFWQLPPAFLSSATLAAGIALISSFGSIAAFLAP YLIGWMRDTTQSASLALYLLAILIALGAGLVLRTPAAVVNPR" misc_feature 4614090..4615298 /locus_tag="PA4126" /note="Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; Region: MFS_ExuT_GudP_like; cd17319" /db_xref="CDD:340877" misc_feature order(4614132..4614137,4614144..4614149,4614156..4614158, 4614252..4614254,4614402..4614407,4614411..4614419, 4614426..4614428,4614486..4614488,4614495..4614500, 4614507..4614509,4614792..4614794,4614801..4614806, 4614813..4614821,4614828..4614830,4614912..4614914, 4614924..4614926,4615077..4615082,4615092..4615094, 4615104..4615106,4615152..4615154,4615161..4615166, 4615173..4615178,4615185..4615187) /locus_tag="PA4126" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340877" gene 4615346..4616149 /gene="hpcG" /locus_tag="PA4127" /db_xref="GeneID:880260" CDS 4615346..4616149 /gene="hpcG" /locus_tag="PA4127" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-oxo-hepta-3-ene-1,7-dioic acid hydratase" /protein_id="NP_252816.1" /db_xref="GeneID:880260" /translation="MLDPRLIQEAANRLDAAERSRQQVRQFSLDYPDIAIEDAYAIQR AWVERKIADGRVLKGHKIGLTSRAMQVSSNISEPDYGALLDDMFFEEGSDIPFQRFIV PRVEVELAFILGKPLKGPGCTLFDVLEATEWVIPALEIIDARIQQVDPQTKVTRKVFD TISDNAANAGVVMGGRAVRPGDIDLRRVPAILYRNGVIEESGVSAAVLNHPAKGVAWL ANKLAPYGVCLEAGQVILGGSFTRPVAAAPGDTFHVDYDLLGSISCRFV" misc_feature 4615346..4616146 /gene="hpcG" /locus_tag="PA4127" /note="Protein of unknown function (DUF2848); Region: DUF2848; cl11421" /db_xref="CDD:472178" gene 4616162..4616968 /locus_tag="PA4128" /db_xref="GeneID:881843" CDS 4616162..4616968 /locus_tag="PA4128" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase" /protein_id="NP_252817.1" /db_xref="GeneID:881843" /translation="MDLPVNRFKQRLRSGEAQIGLWLGLADPYCAELAANAGFDWLLL DGEHAPNDLRSLLGQLQALAPYPGQPVIRPVQGDTALIKQLLDIGAQTLLVPMVDSAA QAEGLVRAVRYPPAGVRGVGSALARASRWNSVAEYLNHADEQMCLLVQVENLEGLANL DAIAAVEGVDGVFIGPADLSAAMGHRGNPGHPEVQAAIEDAIHRIRTAGKAAGILSAD ETLARRYLELGCAFVAVGVDTSLLMRSLRELAGRFKGGAPAPSASSSVYG" misc_feature 4616177..4616923 /locus_tag="PA4128" /note="2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Region: HpaI; TIGR02311" /db_xref="CDD:131364" gene complement(4617050..4617538) /locus_tag="PA4129" /db_xref="GeneID:881844" CDS complement(4617050..4617538) /locus_tag="PA4129" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252818.1" /db_xref="GeneID:881844" /translation="MNNLIRLRDGVAEVCRDDPWQLLRELPDALPPGPLLLPLAAWLE RRGEAGAAAPWLAPDDEVEALLPHFAELPLIAVDFPSFRDGRGYSLAYLLRVRLGWSG ELRAVGDVLRDQLSHMRQCGFDAFAVREDKNVEDALKGLAGLSVLYGRSAIEPRPLFR RR" misc_feature complement(4617053..4617538) /locus_tag="PA4129" /note="Uncharacterized conserved protein, DUF934 family [Function unknown]; Region: COG3749" /db_xref="CDD:442963" gene complement(4617535..4619208) /locus_tag="PA4130" /db_xref="GeneID:881847" CDS complement(4617535..4619208) /locus_tag="PA4130" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sulfite/nitrite reductase" /protein_id="NP_252819.1" /db_xref="GeneID:881847" /translation="MYQYDEYDQALVSERVAQFRDQIARRLDGELSEEEFLPLRLQNG LYLQKHAYMLRVAIPYGTLSAPQLRALAHVARHYDRGYGHFTTRQNIQFNWIELEQVG DILEHLAGAQMHAIQTSGNCVRNITTEAFAGVAADEWTDPRPLAEILRQWSTVNPEFL FLPRKFKIALSSAVEDRAAVQMHDIGLYLYRHPDAGELRLRVLVGGGLGRTPMLGQVI RDDLPWQHLLSYVEAILRVYNRYGRRDNKYKARIKILVKALGIEAFAREVEEEWQHLR DGPAQLTAEECQRVAERFVLPRYLPPADGELAYGSARAADPAFARWASRNVQAHKVPG YASVVLSTKPGASAPPGDVTAEQMERVADWAERYGFGEIRVAHEQNLVLPDVRLENLH ALWREACAAGLGTPNQGLLSDIIACPGGDYCALANAKSIPIAQGIQQRFEDLDHLHDI GELSLNISGCMNACGHHHIGNIGILGVDKSGSEWYQVTLGGAQGKDSALGKVIGPSFS AAEVPAVIERIVETFTDLRVGPERFIDTFNRVGLEPFKARVYARMEEPA" misc_feature complement(4617556..4619208) /locus_tag="PA4130" /note="Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism]; Region: CysI; COG0155" /db_xref="CDD:439925" gene 4619314..4621035 /locus_tag="PA4131" /db_xref="GeneID:881848" CDS 4619314..4621035 /locus_tag="PA4131" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="iron-sulfur protein" /protein_id="NP_252820.1" /db_xref="GeneID:881848" /translation="MFTGTHYRPRTDSETAADSAEKNTSDGRRRRIRAACDRLPRGAY LYCRRSPGNPRQCWAAAFRRHLIRFFPLDLPLFRPSAGSYSRNRLSSLMGLRKMSERI PAIQVEPAVPAAPSKQPPAPGKLPSAVNGPIYTRSFTGLFRNFRRLGGGLLFLLFFGT LWLNWNGRQAVLWDLPERKFYIFGATFWPQDFILLSALLIIAAFGLFFITVFAGRVWC GYTCPQSVWTWVFMWCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALWLGVSLVTA ITFIGYFTPVRPLVADLFSFQLDLESLFWVLFFTAATYVNAGWLREQVCIHMCPYSRF QSVMFDKDTLIVSYDAARGESRGARKKGSDPRAQGLGDCIDCQQCVQVCPTGIDIRDG LQIACIGCAACVDACDSIMDKMGYERGLVRYTSERALEGGQTRFLRPRLVGYAAVMLA MIGAFVVALDARPLASLDVTRDRGLFRENAAGQIENIYTLKVINKTQQPQRYRLQLDD APEFRLQGEHTLSLKPGEILDFPVSVASTAERARAGSQPLAFSLRGIDDPSLAVGSTS TFVSPAR" misc_feature 4619797..4620987 /locus_tag="PA4131" /note="cytochrome c oxidase accessory protein FixG; Region: ccoG_rdxA_fixG; TIGR02745" /db_xref="CDD:274278" gene 4621133..4622548 /locus_tag="PA4132" /db_xref="GeneID:880050" CDS 4621133..4622548 /locus_tag="PA4132" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252821.1" /db_xref="GeneID:880050" /translation="MKRYEKFADEIAELIRTGVLAPGQKVPSVRHASRTYGVSASTVF QAYYLLESRGLIMARARSGYFVCQHVQRPLPEPEISPRQADATEVDVSELVFSVLSSI KDPDTVPFGSAFPSPQLFPLPRLARSMAHAVRDMDPQSVVADMTPGNHGLRRQIALRY MVGGLLLPVEELVISNGALEALNLCLQVVTRPGDLVAIEAPAFYATLQVLERLKLKAV EIPVHPREGIDLEVLADSLERLPIKACWFMSNFQNPMGASMDDEKKRALAELLARHQV PMIEDDVYAELYFGQQAPKPVKAYDQEGLVMHCSSFSKSLAPGYRVGWVAGGRYAEQI ERLKLMTSLSASIPAQAAIADYLQHGGYDRHLRKLRYALETQQNAMLAAVARYFPEQT RVSRPSGGYFLWLELPEAVDSLRLFQLALAQGISLAPGPIFSATRRFAHCARLNYGHP WSARQEKAMETLGRITQSLAG" misc_feature 4621133..4622542 /locus_tag="PA4132" /note="DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; Region: ARO8; COG1167" /db_xref="CDD:440781" gene 4622812..4624239 /locus_tag="PA4133" /db_xref="GeneID:880051" CDS 4622812..4624239 /locus_tag="PA4133" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cbb3-type cytochrome C oxidase subunit I" /protein_id="NP_252822.1" /db_xref="GeneID:880051" /translation="MNKATTEPAYNYKVVRQFAIMTVVWGVIGMGLGVLIASQLVWPQ MNFDLPWTSFGRLRPLHTNLVIFAFGGCALFATSYYTVQRTCQVRLFSDTLAAFTFWG WQAVAVILLVSLPLGNTTTKEYAEIEFTGAIWLAIVWVAYAVVFFGTLIKRKVKHIYV GNWFFGSFILTTAMLHIVNHMSLPVSWFKSYSMYSGATDAMVQWWYGHNAVGFFLTTG FLGMMYYFVPKQAGRPVYSYRLSIVHFWALITLYIWAGPHHLHYTALPDWAQSLGMVM SLILLAPSWGGMINGMMTLSGAWHKLRDDPILRFLVVSLAFYGMSTFEGPMMAIKTVN ALSHYTDWTIGHVHAGALGWVAMITIGSLYHLIPKVYGVEKMHSVGLINAHFWLATIG TVLYIASLWVNGITQGLMWRAVNEDGTLTYSFVESLVASHPGFIVRLVGGGFFLTGML LMSYNTWRTVRQARPEGILAAARMA" misc_feature 4622821..4624236 /locus_tag="PA4133" /note="cbb3-type cytochrome c oxidase subunit I; Provisional; Region: PRK14488" /db_xref="CDD:237726" misc_feature order(4622839..4622841,4622860..4622862,4622872..4622877, 4622887..4622889,4623040..4623042,4623832..4623834, 4623853..4623855,4623862..4623867,4624042..4624047, 4624129..4624131) /locus_tag="PA4133" /note="Low-spin heme binding site [chemical binding]; other site" /db_xref="CDD:238461" misc_feature order(4622917..4622919,4622926..4622928,4622950..4622952, 4622959..4622961,4623136..4623141,4623157..4623159, 4623169..4623171) /locus_tag="PA4133" /note="D-pathway [active]" /db_xref="CDD:238461" misc_feature order(4623394..4623396,4623409..4623414,4623811..4623813, 4623823..4623828,4624042..4624044) /locus_tag="PA4133" /note="Putative water exit pathway; other site" /db_xref="CDD:238461" misc_feature order(4623433..4623435,4623583..4623588,4623847..4623849) /locus_tag="PA4133" /note="Binuclear center (active site) [active]" /db_xref="CDD:238461" misc_feature order(4623433..4623435,4623445..4623447,4623478..4623480, 4623583..4623588,4623661..4623663,4623670..4623672) /locus_tag="PA4133" /note="K-pathway [active]" /db_xref="CDD:238461" misc_feature order(4623586..4623588,4623823..4623828,4624042..4624047) /locus_tag="PA4133" /note="Putative proton exit pathway; other site" /db_xref="CDD:238461" gene 4624323..4624565 /locus_tag="PA4134" /db_xref="GeneID:880084" CDS 4624323..4624565 /locus_tag="PA4134" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252823.1" /db_xref="GeneID:880084" /translation="MEFSWSEILLELLAVAVLFFGVHWSLRHAKTLDQASMLPFADDE EVARRVERETGRSRTGCGCPGRCQGDCRHWDKNWPA" gene complement(4624581..4625003) /locus_tag="PA4135" /db_xref="GeneID:880085" CDS complement(4624581..4625003) /locus_tag="PA4135" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252824.1" /db_xref="GeneID:880085" /translation="MSTPRPSLTLTLLQAREAAMSFFRPSLNQHGLTEQQWRVIRILR QQGEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCF VSMSGDMEKNYQRIQERFGEEKLAQLLELLNELKKIKP" misc_feature complement(4624632..4624985) /locus_tag="PA4135" /note="homoprotocatechuate degradation operon regulator, HpaR; Region: HpaR; TIGR02337" /db_xref="CDD:188209" gene complement(4625089..4626297) /locus_tag="PA4136" /db_xref="GeneID:880090" CDS complement(4625089..4626297) /locus_tag="PA4136" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_252825.1" /db_xref="GeneID:880090" /translation="MPASASRIQVGSGERRLLLLLSALVAFGPLSIDMYLPSLPAIAA DLGASDAQVQRSISGFLVGFCVGMLFYGPLSDRFGRRPVLLAGIALYLFSSLACALAD SAGQLVLLRVLQALGGGAASVLARAMVRDLYPLGEAARMLALMHMVTMLAPLAAPLLG GYLMLWAGWRALFVVLALFAGLCLLAVWRVAESHPPERRGGSLAQAFLAYGRLLGDRR ALGYVLCMGLAFAGMFAYISAAPFVFIEHFGVRAERFGWFFGLNILGVMLATWCSARL VRRHGPRPLLRAGSLLACVSGLFLLGYAALGERGGLWALVPGLLCFVSVTGLLGANCI ASLLALYPGQAGAASAVAVSGQFGLGCLASLAVGWLALPGVLPMALVMAVCGVGSLLA LGLALHGGNR" misc_feature complement(4625137..4626234) /locus_tag="PA4136" /note="Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_MdfA_MDR_like; cd17320" /db_xref="CDD:340878" misc_feature complement(order(4625227..4625229,4625587..4625589, 4625596..4625598,4625839..4625844,4625851..4625853, 4625944..4625946,4626115..4626120,4626127..4626129, 4626199..4626204,4626211..4626216)) /locus_tag="PA4136" /note="chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340878" gene 4626662..4627918 /locus_tag="PA4137" /db_xref="GeneID:880091" CDS 4626662..4627918 /locus_tag="PA4137" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="porin" /protein_id="NP_252826.1" /db_xref="GeneID:880091" /translation="MITACPRPCAWRSYALGLGLLPLAAQAEFLADSSAHLDLRNFYQ LRDYRQHDAPQSQAGNWSQGFVLRLQSGFTGGPLGFGLDATGLLGVKLDSGRGRSNDG TLPFGANSKEPVDDYSHLGLTAKLRYSQTQLQVGILMPQLPVAFRDDVRLLPQTFDGA LLTSSEIEGLTLTAGQLWKSRTRESAGSDDMYIMGRDKAHASDEFNLAGATYAFTPRL SASYYYGQLKDIYRQHYLGLLHTLPLGEGLSLRSDLRYFDSGEDGAAISGPVDNRNLN AMLTLRAGAHAFGIGVQKMIGNDAFPVLNGYTTPYVANLMAYQTFTRPQEKSWQLRYD YDFAGLGLPGLNLMTRYVQGRDIDRGAGRADDSEWERNTDLSYVIQSGPLKSVALKWR NITYRSRYGADLDENRFIVNYTLKLW" misc_feature 4626740..4627909 /locus_tag="PA4137" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene complement(4627947..4629185) /gene="tyrS" /locus_tag="PA4138" /db_xref="GeneID:880105" CDS complement(4627947..4629185) /gene="tyrS" /locus_tag="PA4138" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tyrosine--tRNA ligase" /protein_id="NP_252827.1" /db_xref="GeneID:880105" /translation="MSVPTHQQDLIALLEERGFVHQCTDRDGLAAHLAAGPATAYLGF DATADSLHVGHLQGLMLMRWLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQ ANIDGIARVFSRYVELHDDSLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQR LDREHSLSFLEFGYTLLQAYDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQ LFGLTMPLLATSDGRKMGKSAQGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSE LPMDEVRRLGALQGAELNEAKVVLANAATALAHGEHAARSAADAARGVFADGTRDSGL PVMKLSRARLAQGLSLTDLLLEHAIQPSRSAVRRLAAGGGLRLDGTPVSDPDTPLAGE VDGLRLSLGKKQHLHLRLED" misc_feature complement(4627953..4629161) /gene="tyrS" /locus_tag="PA4138" /note="Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: TyrS; COG0162" /db_xref="CDD:439932" gene 4629944..4630243 /locus_tag="PA4139" /db_xref="GeneID:880106" CDS 4629944..4630243 /locus_tag="PA4139" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252828.1" /db_xref="GeneID:880106" /translation="MQLATLQELSFDEIDQVSGAGLFSFVGDAIVDVVKVSNDLLNTS VISSVGKVFNAVGLTPIHQLADTLGYGVFKGVAAVGGLLGGDTSRIDYHYDTEWT" gene 4630375..4632168 /locus_tag="PA4140" /db_xref="GeneID:880095" CDS 4630375..4632168 /locus_tag="PA4140" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252829.1" /db_xref="GeneID:880095" /translation="MHDLIQHADAFVGDPDQESGGLSRRSFLGKSATLGAVGLVAGWT PAFVIQPAEAAASSCPAPAGFPAGLELYRRAFRNWSGEIAADDLWSCAPRTNEEVLAV VNWAWQNGFKVRPRGMGHNWSPLLLKGGENCESRIVLVETSRYLTRVRIDAQGEFGLF SAQTGVTMEALLKQLERVKLGFVATPAPGDLTLGGVLAIDGHGTGIPAQGESRLPGQS YGSLSNSIVALTAVVWDGAAGQYVLKTFRRDDPACAPFLVHLGRAFIVEATLQAGVNK RMRCQSYVNIPASEMFAAAGSGGRTFDSFLQKSGRAEAIWFPFTDKPWLKVWTPTPRC PFGARAVNGPFNYPFSDNIPKALSDLLAAINTGHPELTPLLGKLQYDLVVGGMALTLG YDLWGWSKDLLLYIKPSTLRVTANGYAVLTRRRDVQRVINEFYLQYQTMVAAYRANGH YPMNGPVEIRVSGLDQPGESIVPGAQVPSLSAIRPRPDQPEWDTAIWLDILSLPGTPQ ANAFYHEFEAWLFDHFSGDYASLRVEWSKGWGYSPAAAWDEPTVVDQLVAQSLRQGLV ADNDWDSAVRQLNEADPHRLFSSPLLDRLMP" misc_feature 4630648..4631082 /locus_tag="PA4140" /note="FAD binding domain; Region: FAD_binding_4; pfam01565" /db_xref="CDD:426326" misc_feature 4631203..4632165 /locus_tag="PA4140" /note="Cholesterol oxidase, substrate-binding; Region: Chol_subst-bind; pfam09129" /db_xref="CDD:401173" protein_bind 4632298..4632311 /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" protein_bind complement(4632341..4632354) /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" protein_bind complement(4632365..4632378) /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" protein_bind complement(4632455..4632468) /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" gene 4632477..4632776 /locus_tag="PA4141" /db_xref="GeneID:880096" CDS 4632477..4632776 /locus_tag="PA4141" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252830.1" /db_xref="GeneID:880096" /translation="MKELNDIEVTCVSGGTLSGMIVGAVDGAATGMAIGGKWGGAGGF GFGALSQLVGLIVPTAMGAIAGGTVGLFTNAETAVGYLGQYRENFGPGDVGRTTI" misc_feature 4632531..4632734 /locus_tag="PA4141" /note="Family of unknown function (DUF5862); Region: DUF5862; pfam19180" /db_xref="CDD:437027" gene 4632873..4634129 /locus_tag="PA4142" /db_xref="GeneID:880112" CDS 4632873..4634129 /locus_tag="PA4142" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="secretion protein" /protein_id="NP_252831.1" /db_xref="GeneID:880112" /translation="MFRQEALDAQHAGGLGEIVLIRPVSFTFLTLLAAAMALLVVGFF LFGSYTKRSTVSGQLVPASGQVKVHAPQAGIVLRKFVQEGQAVRRGERLMVLSSERYG SDAGPVQAGISRRLEQRRDSLRDELEKLRRLQDDERDSLTSKVASLQRELTTLAAQTD SQQRLLALASDAAARYQGLMDKGYISMDQLQQRQAELLGQRQTLQGLERERTSLRQQL TERRNELAGLSARQANQLAETRRQLSAVEQDLAESEAKRTLLVTAPESGIATAVLAEA GQTVDSSRPLLSIVPADTPLQAELYAPSKSIGFIRPGDAVLIRYQAYPYQKFGQYHGK VQSISRASVSYAELSSMVGGVPGLGQDGEQLYRLRVTLDDQAVTAYGQPRPLQSGMLL DADILQDTRRLYEWVLEPLYSLTGKL" misc_feature 4632990..4634060 /locus_tag="PA4142" /note="Multidrug resistance efflux pump EmrA [Defense mechanisms]; Region: EmrA; COG1566" /db_xref="CDD:441174" gene 4634139..4636298 /locus_tag="PA4143" /db_xref="GeneID:880113" CDS 4634139..4636298 /locus_tag="PA4143" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="toxin transporter" /protein_id="NP_252832.1" /db_xref="GeneID:880113" /translation="MAFLDALALRLGRRLPLVLQTEATECGLACLAMIAGYHGHHTGL MELRRRFSVSLKGISLKQLIQTAHRLGLGTRAVKLDLGDLGKLKLPCVLHWNFNHFVV LKAVDGRGAVLHDPAHGQRRLGLEEVSRSFTGVALELWPESGFEKQEAPPRIKLLGML GKVTGLYRSLAQVLLLAGALEVFSLISPFFLQWTIDNVIVSEDRDLLSTLAIGFGLLL LMQQAVSGVRAWVMMHMSTLLGVQWQANVFSHLLRLPAQYFEKRHLGDVVSRFGAVNS IQQTLTAAFLSAVLDGLMTVATLGMMLLYSPPLAAIAIAAMSLYALGRWIWYRPLRNA TEEQIVHAARQQSHFLETVRGIRPLKLFQRQDERRSVWLGLLVEQINAGLRTQKLQLF YQQLNGLLFGVENLLVIWLGATMVMDGQFSVGILMAFNAYKSQFDSRVGSLIDKFFEL RMLQLQGERLADIVLQAPEVSHGDILPENLREREASIEIQGLRYRYAEQEPWVLDGLD LRIAGGESVAIVGPSGCGKSTLFNVLLGILPPVEGQIRMAGLDLAQLGLDGLRELVGT VLQDDVLFAGSLSDNISFFDPQPDMPWLLQCAQMAAIHDDIQAMPMGYNTLVGDMGTV LSGGQKQRVMLARALYKKPRILFLDEATSHLDVHCEQRVNAAIRALRITRIMVAHRPE TIASADRVIVLGQGKVSLDESTARLAERQAAAAREQA" misc_feature 4634175..4636232 /locus_tag="PA4143" /note="ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]; Region: SunT; COG2274" /db_xref="CDD:441875" protein_bind 4635933..4635945 /locus_tag="PA4143" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4636298..4637713 /locus_tag="PA4144" /db_xref="GeneID:880262" CDS 4636298..4637713 /locus_tag="PA4144" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252833.1" /db_xref="GeneID:880262" /translation="MRALAGLLCGLLGLVPGAAAYEPDVFGTTGQVAGQAVYDLGGSG LPCRGGPPPTELSLEEAIERILCHDPQTRLAWANAKAQAAQVGIGKSAYLPRLDGRLD ASRGYSDMDYRDAPYLSGDGHRHRRGASLQLSWVLFDFGRRSAALRNAQQLLLAANAS QDATLQNTFALAAQAYYDALAAQRSLAASRQVAELAAQNLEAADAKYRAGAAALSDRL QAQTALSQASLAQVRDEGALSNALGVIALRMGLAPDTPLRLSGELEAQPDTGFVKAID EMLAEARREHPALLAAQARLKAAAASVEESRAAGRPSLALSANLARSHSDQAMAFNGD TRERDRSIGLQLNIPLFEGFERTYQVRNALARREASEAELADTEQQVSLEVWNNYQSL SVETRSLARTRELVEQSRQSLEVVQGRYRSGVGSMIELLNALTAYASAEDQHIRALGN WQTSRLRLAASLGRLGFWSLR" misc_feature 4636466..4637692 /locus_tag="PA4144" /note="Outer membrane protein TolC [Cell wall/membrane/envelope biogenesis]; Region: TolC; COG1538" /db_xref="CDD:441147" gene 4637809..4638699 /locus_tag="PA4145" /db_xref="GeneID:880263" CDS 4637809..4638699 /locus_tag="PA4145" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252834.1" /db_xref="GeneID:880263" /translation="MIDDIRYLIVFAKIAETGSVSGGAEALGLSAATASLHLSRLERN LGRALLYRNSRKLSLTQDGTQLLDTARSMLELYEKGFIEFRQRAVSTRNSLRISMPAV FVNGDFTRHLAAFIEEHPDLDLGIACDDSRHDIIGDGIDIAFRIGDLPDSSLKARHLF LLPRQVVAAPAFLARHAPLEHPRDLQRLEWIGLGMRPDSRLFRHARDDEEVRVDYTPR VRVDSVEASCRLARLGVGLAAPPTYLSDEPIRRGELRAVLPEWRLEPLKVYAVWPPNV PASSIAYTLINRLYEAFNPG" misc_feature 4637821..4637997 /locus_tag="PA4145" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 4638091..4638633 /locus_tag="PA4145" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain; Region: PBP2_CrgA_like; cd08422" /db_xref="CDD:176114" misc_feature order(4638115..4638117,4638127..4638129,4638244..4638246, 4638286..4638288,4638292..4638294,4638478..4638480, 4638529..4638531,4638610..4638612) /locus_tag="PA4145" /note="putative effector binding pocket [active]" /db_xref="CDD:176114" misc_feature order(4638118..4638123,4638133..4638138,4638142..4638147, 4638154..4638156,4638166..4638168,4638172..4638192, 4638373..4638375,4638460..4638474,4638493..4638498, 4638505..4638507) /locus_tag="PA4145" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176114" gene complement(4638686..4639432) /locus_tag="PA4145a" /db_xref="GeneID:17373382" CDS complement(4638686..4639432) /locus_tag="PA4145a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719776.1" /db_xref="GeneID:17373382" /translation="MPVGFPCSVPGSGATPSVAPRQEPTEETHARPAPASPQSDRGVR PMPLALLLAMGAFSLSLSISPGPVNLTIVASGANHGFRRTLPFVTGATLGFVLLLAFV GFWFVRAIEAYPRFFDYLGMAGAAFIAHVGYRIATADPRLALEENGVPGFFQGVLLQW LNPKAWIACASGVALFASPSTHAPLLVFMAIYLVVCYLSLAAWALLGDRVALLLDSPR RVRLFNRAMGGTLVLTAGYMLYLQLAASPD" misc_feature complement(4638713..4639297) /locus_tag="PA4145a" /note="Threonine/homoserine/homoserine lactone efflux protein [Amino acid transport and metabolism]; Region: RhtB; COG1280" /db_xref="CDD:440891" gene complement(4639502..4641379) /gene="acoR" /locus_tag="PA4147" /db_xref="GeneID:880118" CDS complement(4639502..4641379) /gene="acoR" /locus_tag="PA4147" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcriptional regulator AcoR" /protein_id="NP_252836.1" /db_xref="GeneID:880118" /translation="MLSAHSKDHVDCVSRVLRNAARLPQAPVPTPILDSWRRSMEQHR LDPGSLQGPRILSQTLLDECRERSELFLRIASEEVARLHGRVRDADYCVLLTDAQGRT IDYRVESTIRNDCRKAGLYLGTCWSEGEEGTCGVAAVLTDRTAVTVHKRDHFRAAFID LTCSAAPVFDPQGELLGVLDVSAVQSPDDRRSQHLIRQMVAQSAREIENAFFMHSAQG HWVLRAHRAPGYVDSQPDYLFAWDADGRLLALNPAARHYLRQRLGQVPSHIGEVFDLD ALHAAADQAPCLLRGQAGELHVRLSAPRAKARRLEREVPDDAALDPRIAESLRLAVRV KDRNLPVLIQGETGAGKEVFARQLHQASARRDKPFVALNCAAIPESLIESELFGYVGG AFTGAAAKGMRGLLQQADGGTLFLDEIGDMPLGLQTRLLRVLAEGEVAPLGAARRQAV DIQVICATHRDLAALVAAGGFREDLYFRLGGARFELPPLRERSDRLALIRRILDEETA HCGVRIELGEAALECLLGYRWPGNVRQLRHVLRYACALCGGATLQLADLPAELRGERR TPASACESGGGPERDALLDALVRHRWKPMAAARELGISRATLYRRVRRHGIRMPGQAD D" misc_feature complement(4639532..4641367) /gene="acoR" /locus_tag="PA4147" /note="Transcriptional regulator DhaR of acetoin/glycerol metabolism [Transcription]; Region: AcoR; COG3284" /db_xref="CDD:442514" gene 4641711..4642511 /locus_tag="PA4148" /db_xref="GeneID:880108" CDS 4641711..4642511 /locus_tag="PA4148" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_252837.1" /db_xref="GeneID:880108" /translation="MHATSSDDFSLSSRVALVTGAGRGIGRGIALALARAGADVAVAD LDPQVAEETAAAIRSLGRRSLALGVDVSDGDSVRAMVERVATEFGRLDVAVNNAGVIS IRKVAELSLADWDRVMNVNARGVFLCCQAELPLMQAQRWGRIVNLSSIAGKVGLPDLA HYCASKFAVIGFSNALAKEVARDGVTVNALCPGIVGTGMWRGEDGLSGRWRQAGESEA QSWERHQASLLPQGEAQTVEDMGQLVVYLACAPHVTGQAIAVDGGFSL" misc_feature 4641735..4642508 /locus_tag="PA4148" /note="NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Lipid transport and metabolism]; Region: FabG; COG1028" /db_xref="CDD:440651" gene 4642508..4643548 /locus_tag="PA4149" /db_xref="GeneID:880109" CDS 4642508..4643548 /locus_tag="PA4149" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252838.1" /db_xref="GeneID:880109" /translation="MTPPSPIVGIIANPASGRDLRRLTAHAGLHSSTDKASVVQRLLA AFGATGIRHALLPPDMTGIAAAVLRASQTRQARDGHWPFLEFLDMPLRQSVEDTRLAA RRMVERGVALIAVLGGDGTHKAVAAEVGDVPLLALSTGTNNAFPELREATGAGLAGGL CASNRVPPEIGLRRNKRLLVREPRRGLCEWALVDVAVSPQPFIGARAISRAEDLAEVF VSFAEPHAIGLSALCGLWSPVSREEPHGAWMRLHPDARESLLVPLAPGLLVGCGVSAA GYLQPGVAHAPSLSSGTLALDGEREIEFSATDRPSITLDPSGPFSVDVPATLAYAARH RLLAGQRTPMTP" misc_feature 4642523..4643482 /locus_tag="PA4149" /note="NAD kinase [Nucleotide transport and metabolism]; Region: COG3199" /db_xref="CDD:442432" gene 4643571..4644545 /locus_tag="PA4150" /db_xref="GeneID:880054" CDS 4643571..4644545 /locus_tag="PA4150" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="dehydrogenase E1 component" /protein_id="NP_252839.1" /db_xref="GeneID:880054" /translation="MSTLSTDQLLHAYRVMRTIRAFEERLHVEFATGEIPGFVHLYAG EEASAAGVMAHLRDDDCIASTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCQGKGGSMH IADLEKGMLGANGIVGAGAPLAAGAALAAKLKGSDAVAVAFFGDGGSNEGAVFEAMNL ASVWNLPCLFVAENNGYAEATAANWSVACDHIADRAAGFGMPGVTVDGFDFFAVHEAA GAAIERARAGEGPSLIEVKLTRYYGHFEGDAQTYRDPDEVKHYRETRDCLKQFRERTC HAGLLSASDLDAIDAEVEARIEDAVQRAKNDPKPEPDDLLRDVYVSYP" misc_feature 4643580..4644542 /locus_tag="PA4150" /note="TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha [Energy production and conversion]; Region: AcoA; COG1071" /db_xref="CDD:440689" gene 4644578..4645597 /gene="acoB" /locus_tag="PA4151" /db_xref="GeneID:880055" CDS 4644578..4645597 /gene="acoB" /locus_tag="PA4151" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="acetoin catabolism protein AcoB" /protein_id="NP_252840.1" /db_xref="GeneID:880055" /translation="MARKISYQQAINEALAQEMRRDPSVFIMGEDNAGGAGAPGEDDA WGGVLGVTKGLYHQFPGRVLDTPLSEIGYVGAAVGAATRGMRPVCELMFVDFAGCCLD QILNQAAKFRYMFGGKAVTPLVIRTMVGAGLRAAAQHSQMLTSLWTHIPGLKVVCPSS PYDAKGLLVQAIRDNDPVIFCEHKLLYSMQGEVPEELYSVPFGEANFLRDGDDVTLVT YGRMVHLALDAAASLARQGISCEVLDLRSTSPLDEDSILESVEKTGRLVVVDEANPRC SMATDIAALVAERAFSALRAPIRRVTAPHTPVPFSDALEDLYIPDAAKIEAAVRQALE GRDAA" misc_feature 4644584..4645579 /gene="acoB" /locus_tag="PA4151" /note="Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component, beta subunit [Energy production and conversion]; Region: AcoB; COG0022" /db_xref="CDD:439793" gene 4645594..4646706 /locus_tag="PA4152" /db_xref="GeneID:880133" CDS 4645594..4646706 /locus_tag="PA4152" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="branched-chain alpha-keto acid dehydrogenase subunit E2" /protein_id="NP_252841.1" /db_xref="GeneID:880133" /translation="MSRIHTLTMPKWGLSMTEGRVDAWLKEEGAHIEKGDEVLDVETD KISSSVEAPFSGVLRRKVAREDETLAVGALLGVVVEGEASDEEIDALVQRFQAEFVPA DEDAGDSGPAPRKVELDGRLLRYFDRGEGDPALLLIHGFGGDLNNWLFNHEALAAERR VIALDLPGHGESGKALVRGDLDELSGSVLALLDHLDLEQVHLAGHSMGGAVALNCARL APQRVLSLSLIGSAGLGEEINGDYLRGFVEAANRNALKPQLVQLFSDPALVTRQMLED MLRYKRLEGVDAALRQLLDNLFADGRQRNDLRAVANEGRQPVLAIWGSDDAIIPARHA EGLPAQVEIIPGQAHMVQMEAAEQVNRLLLDFLRQH" misc_feature 4645600..4646703 /locus_tag="PA4152" /note="acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional; Region: PRK14875" /db_xref="CDD:184875" gene 4646720..4647811 /locus_tag="PA4153" /db_xref="GeneID:880134" CDS 4646720..4647811 /locus_tag="PA4153" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2,3-butanediol dehydrogenase" /protein_id="NP_252842.1" /db_xref="GeneID:880134" /translation="MNSSPQANAAMRAAVWHGRHDIRVEDVPLPAEPPPGWVQIRVHW CGICGSDLHEYLAGPVFIPVEAPHPLTGLKDQCILGHEFSGEIVRLGNGVTGFAVGQA VAADACQHCGTCYYCRHGLYNICENLAFTGLMNNGAFAEYVNVPANLLYALPAGFPSE AGALIEPLAVGMHAVKKAGSLLGQNVVVVGAGTIGLSTIMCARAAGAAQVIALEMSSA RKAKALEVGASQVLDPSRCDALGEIRALTGGLGADVSFECIGNKHTAKLAIDAIRKAG KCVLVGIFEEPSEFNFFELVSTEKQLLGALAYNGEFADVIAFIADGRLDIAPLVTGRI GLEEIVERGFEELVNNKEHNVKIIVSPGG" misc_feature 4646750..4647799 /locus_tag="PA4153" /note="(2R,3R)-2,3-butanediol dehydrogenase; Region: butanediol_DH_like; cd08233" /db_xref="CDD:176195" misc_feature order(4646861..4646869,4646876..4646878,4647215..4647217, 4647227..4647229,4647287..4647304,4647359..4647364, 4647374..4647376,4647419..4647421,4647491..4647496, 4647500..4647502,4647569..4647574,4647632..4647640) /locus_tag="PA4153" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176195" misc_feature order(4646861..4646863,4646867..4646869,4646960..4646962, 4647215..4647217) /locus_tag="PA4153" /note="catalytic Zn binding site [ion binding]; other site" /db_xref="CDD:176195" gene complement(4647895..4648563) /locus_tag="PA4154" /db_xref="GeneID:880175" CDS complement(4647895..4648563) /locus_tag="PA4154" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252843.1" /db_xref="GeneID:880175" /translation="MSLSRRIPAALSPFQNRVIGACLLGGLLAAGAPAQAEEATGNAR WVSDSLTTFVRSGPTDGYRIVGTLTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDLQ EVPGQAERLPQLEQKVAALTAELDGINDTWKTRVQGMQETLDTRKKLIDELQAARSNL DAELGKARSDLRAVQAQLGDENKQVLMRYMVYGGSIAGAGLFAGLILPSLLRVRRKRN DKWF" misc_feature complement(4647901..4648464) /locus_tag="PA4154" /note="SH3 domain-containing protein; Provisional; Region: PRK10884" /db_xref="CDD:182809" gene complement(4648999..4650306) /locus_tag="PA4155" /db_xref="GeneID:880176" CDS complement(4648999..4650306) /locus_tag="PA4155" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252844.1" /db_xref="GeneID:880176" /translation="MSTPKRLHIGMSLAPTWLSGDAWRRPDSNIEGIFGSDFAVDIAR RSEAAHLDFVFRPDVSSLPLDVLETGSGFASLDPTVLLAAVARETSRIGLVSTVSTTF YPPYVVARQLQSLHWISDGRAGWNIVTALQGHENFGLDAMPDAEQRYARAAEFTRLVH DLWDSFPREALLVDRESGRYADVSRVRPVDHDGEFLKVKGPLNLPAFGEARIPLVQAG ASESGRDFAASVADLVFAPTPDKEAALELRRDLSRRAERHGRSPRDVRLLPGFSLYLA ESREEAREIFMQTHARLDRARKFAAIRQMLGLDLSDWPLDRPISAADLPPPVANPGSR THTDLLRRLIERETLRLDQLLLRPEVISAAHWQVIGTVDDAVEQIVDWAAAGAMDGFI AAPGGSVGSLRLFLEQVVPRLVEKGLFRERYSATTFAGHLAEE" misc_feature complement(4649014..4650243) /locus_tag="PA4155" /note="Flavin-utilizing monoxygenases; Region: Flavin_utilizing_monoxygenases; cl19096" /db_xref="CDD:450250" misc_feature complement(4650013..4650018) /locus_tag="PA4155" /note="non-prolyl cis peptide bond [active]" /db_xref="CDD:238528" gene complement(4650374..4652458) /locus_tag="PA4156" /db_xref="GeneID:880160" CDS complement(4650374..4652458) /locus_tag="PA4156" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="TonB-dependent receptor" /protein_id="NP_252845.1" /db_xref="GeneID:880160" /translation="MNARTHRKLNRGIGVVTLSTLLASPSALARENPPAEDEPAALEA LVVTGEKRERSLKDTASSVSLTSARDIDRKQTGNASVAEVINGSPNVVYTDSVGAPII RGQDTQGPNNGQNVFWGGTVPRATINLDGHYLNYNEMFFGATSVWDVDSIEVFRGPQT TSQGANAIAGAIIVNTKDPTFSPEAAYQAEIGSYHSRRSSIAVSGPLAQDFAGRLAVD YAGRDTFIDYDNPKFQDSGTDQDFRALNARAKLLWLPSGIPGLESKFTFSHNDNNRPT QEAATRPFDKLDHRSTTMPSWEQDTNTSILDVAYDLDNGIRLFNQAQYSLSSVHRTTG AGGEGDADIRQKNASNESRISFGEQEDRISGMGGVYYARTRTDETLHLRGLSAFDDTK KNLGVFGELNYRLSDRWTLTTGLRYQEDRIERSGNSVLAPRPLDYQKTFSAFLPKVSL AFAATPDWTVGGLVSRGYNPGGVSLNLTTRNWAYFKEETIWNYELFTRASLLDGRLLL NGNLFFMDFKDAQYNIPVVVSPGVAQSYTINAEKAHAYGMELDLDYRLRDDLRLKASA GVLRTRIDEMSGNTGYEHNEFARSPGYTLSFGPSWDVTERLNLNAQVRYLDGYYSDTA NTKAYSIKAYTLTDARASYRFNDQVQLYGYVKNVFDDRSPTYMQENRGIGGIEASMTQ PRTLGIGIKGTF" misc_feature complement(4650479..4652335) /locus_tag="PA4156" /note="Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; Region: CirA; COG1629" /db_xref="CDD:441236" protein_bind 4652468..4652486 /experiment="FURTA [PMID: 21546589]" /experiment="qPCR [quantitative real-time] [PMID: 21546589]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA4156" /bound_moiety="Fur" gene 4652714..4653502 /locus_tag="PA4157" /db_xref="GeneID:880161" CDS 4652714..4653502 /locus_tag="PA4157" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252846.1" /db_xref="GeneID:880161" /translation="MPDAPGEKRSGTIQSVSIAARFLKTLANAEGELALGEVARRTGT GGSTAHRYLQSLVKEGLARQDPLSGLYDLGPAALSIGIGALKRIDAVDIAARHMKALA QRHAASGGVAIWTERGPTLVRWYRSAYFSINPLALGDILPIDNTACGLVFQAFLPKAV VDAARKQQPAHFRGSPPSRALLDEVRERCWAELTSHLLSNVTGQAAPVFDAQQEIVCA MTTVTDLGQLQSAEDRDALFHEALQVNQSTGGLVLHPGMRPPPR" misc_feature 4652738..4653424 /locus_tag="PA4157" /note="DNA-binding transcriptional regulator, IclR family [Transcription]; Region: IclR; COG1414" /db_xref="CDD:441024" gene complement(4653509..4654306) /gene="fepC" /locus_tag="PA4158" /db_xref="GeneID:880321" CDS complement(4653509..4654306) /gene="fepC" /locus_tag="PA4158" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ferric enterobactin transporter FepC" /protein_id="NP_252847.1" /db_xref="GeneID:880321" /translation="MTHRLHADAVTLRRDARTVSRNLSLAIPEGSFSVIVGPNACGKS TLLAALSRLLAPAEGRVVLDGRDIHSLPGREVARRLGLLPQSALAPDGITVAELVARG RYPHQSFLRQWSPADERAVAAALRATRVDGLAERPLDALSGGQRQRVWIAMVLAQETP LLLLDEPTTYLDIVHQIELLELLAELNRQGRTIVAVLHDLNQACRYASHLIAMRDGAI LAEGAPAHIFTERLVEEVFGLRSLIIADPVSGTPLLVPRGIAADAPG" misc_feature complement(4653539..4654297) /gene="fepC" /locus_tag="PA4158" /note="ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component [Inorganic ion transport and metabolism, Coenzyme transport and metabolism]; Region: FepC; COG1120" /db_xref="CDD:440737" gene 4654432..4655337 /gene="fepB" /locus_tag="PA4159" /db_xref="GeneID:880322" CDS 4654432..4655337 /gene="fepB" /locus_tag="PA4159" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="iron-enterobactin transporter periplasmic binding protein" /protein_id="NP_252848.1" /db_xref="GeneID:880322" /translation="MPTRRRSALPLLALALSLFAILAAAGEPKPARIVSTTPSVTGIL LAMDAPLVASAATTPSRLTDAKGFFSQWAKVADQRGVEVLYRNLRFDIEAVIAQDPDL LVASATGADSAAPYRAELEAQGVPTLVVDYSKHSWQELATELGRHTGLERQAQAAIQR FDAYTAEVAAAIAPPQGPVSVVGYNIAGSYSIGRQASPQARLLEALGFQVAELPEALA GKVTRASDFQFISRENLPAAIAGDSVFLLGASDDDVQAFLADPVLANLSAVREKRVYA LGPSSFRIDYYSGRQMIDNVARHFR" misc_feature 4654510..4655334 /gene="fepB" /locus_tag="PA4159" /note="iron-enterobactin transporter periplasmic binding protein; Provisional; Region: PRK10957" /db_xref="CDD:236806" gene 4655368..4656390 /gene="fepD" /locus_tag="PA4160" /db_xref="GeneID:880213" CDS 4655368..4656390 /gene="fepD" /locus_tag="PA4160" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ferric enterobactin transporter FepD" /protein_id="NP_252849.1" /db_xref="GeneID:880213" /translation="MQASPMRRRRLRAWGLLAGALLLALAALASLALGSRPVPLAVTL DALQAVDPHDDRHLVVRELRLPRTLVALLAGAALGVAGALMQALTRNPLAEPGLLGIN AGAALAVIVGVALFDLASMGQYLGCAFLGAGLAGIAVFLLGQARETGTNPVRLVLAGA GLSVMLASLTGIIVLNAPPEVFDRFRHWAAGSLSGSGFALLGWPGLAIGAGLAAAFAL AARLNALALGQEIGQALGVDLRLTWLLACLAVMLLAGAATALAGPIAFVGLVAPHLAR LLAGPDQRWILPFSALIAAGLLLGADILGRLLAAPTEIAAGIVALLLGGPAFIVLVRR FRLSRL" misc_feature 4655473..4656375 /gene="fepD" /locus_tag="PA4160" /note="ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]; Region: FepD; COG0609" /db_xref="CDD:440374" gene 4656387..4657418 /gene="fepG" /locus_tag="PA4161" /db_xref="GeneID:880214" CDS 4656387..4657418 /gene="fepG" /locus_tag="PA4161" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ferric enterobactin transporter FepG" /protein_id="NP_252850.1" /db_xref="GeneID:880214" /translation="MNGLHALRQGSLSLRWRPRAALACLVLAGIGLALAAALLGTGSL ALGPAEVFASLLGQGQDPTAQRIVQRVRLPRVLTACLVGAALGMAGAIFQSISRNPLG SPDVIGFTTGAASGAIVQIILFDAGPLATSLAALAAGLCTALAVVLLARRGATAGGYR LVLVGIGVGASLSGLNSLLLVTGNLDQAMYAQLWLAGSLNTRTWSHVVPAALGLLASV PLALYHGRRLEVLELGDASAAQLGVAVERVRLQMVLVAVGMTAIATAAAGPIAFIALA GPQLARRLTRSAGVPLLSGALMGAVLLLAADLLGQRLAYVANLPIGLMTGLLGGFYLL WLLLRSRRI" misc_feature 4656402..4657382 /gene="fepG" /locus_tag="PA4161" /note="ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism]; Region: FepG; COG4779" /db_xref="CDD:443810" gene complement(4657429..4658145) /locus_tag="PA4162" /db_xref="GeneID:880119" CDS complement(4657429..4658145) /locus_tag="PA4162" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_252851.1" /db_xref="GeneID:880119" /translation="MTNHRTALVTGATRGIGLALARRLAASGWSVVGIARHASDDFPG RLLCCDLADPAQTAETLRGLLSESAVDALVNNAGIALPQSLENLDLAALQQVFDLNVR VAVQLAQACLPGLKRSPAGRIVNLCSRAIHGARERTAYAAAKSALVGVTRTWALELAP LGITVNAVAPGPIETELFRQTRPVGGEEERRILSTIPMQRLGRPDEVAALIEFLLSEG ASFVTGQVIGVDGGGSLGGR" misc_feature complement(4657465..4658142) /locus_tag="PA4162" /note="SDR family oxidoreductase; Region: PRK07577" /db_xref="CDD:181044" gene 4658450..4660159 /locus_tag="PA4163" /db_xref="GeneID:880181" CDS 4658450..4660159 /locus_tag="PA4163" /EC_number="3.5.1.4" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="amidase" /protein_id="NP_252852.1" /db_xref="GeneID:880181" /translation="MIEVTEVSIAELRDALESGRTTAVELVQAYLARIDAYDAPGTPT ALNAVVVRNPDALAEAQASDARRARGEPLGPLDGIPYTAKDSYLVKGLTAASGSPAFK DLVAQRDAFTVERLRAAGAICLGKTNMPPMANGGMQRGVYGRAESPYNAAYLTAPFAS GSSNGAGTATAASFAAFGLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTM DVVVPYARSMADLLEILDVVVADDPDTRGDLWRMQPWVPIPKASEVRPASYPALAAGA EALAGKRFGVPRMFINADPDAGTSESPGIGGPTGQRIHTRPSVIALWEQARKALEAAG AEVIEVDFPLVSNCEGDRPGAPTVFNRGLVSKEFLHDELWELSAWGFDDFLRANGDPK LNRLADVDGPQIFPHDPGTLPNREGDLAAGMDEYVRMAERGIKPWDRIATLPDGLRGL EETRRIDLEEWMRRLRLDAVLFPTVADVGPADADVNPASADIAWSNGVWVANGNLAIR HLGVPTVTVPMGVMADIGMPVGLTFAGRAYDDSALLRFAAAFESTGSRRIVPPRTPPL ASK" misc_feature 4658450..4660147 /locus_tag="PA4163" /note="amidase; Validated; Region: PRK06565" /db_xref="CDD:180626" gene 4660221..4660547 /locus_tag="PA4164" /db_xref="GeneID:880182" CDS 4660221..4660547 /locus_tag="PA4164" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252853.1" /db_xref="GeneID:880182" /translation="MQRLFVYGSLGPGRPNEHLMQKIGGQWQAASLRGRLLEKGWGAG MGFPGLAIDADGEEIHGHVFVSDRLAEHWPALDEFEGSEYRRVATRVTLADGAQVDAY VYALRD" misc_feature 4660227..4660532 /locus_tag="PA4164" /note="Predicted gamma-glutamylamine cyclotransferase YtfP, GGCT/AIG2-like family [Amino acid transport and metabolism]; Region: YtfP; COG2105" /db_xref="CDD:441708" gene complement(4660563..4662053) /locus_tag="PA4165" /db_xref="GeneID:880222" CDS complement(4660563..4662053) /locus_tag="PA4165" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252854.1" /db_xref="GeneID:880222" /translation="MFRQSLLESVKARLLHPQLQALPLHARIQRAIRQLILDGALAPG NPLPASRALAQSLGVSRDTVEAAYSHLHAEGFIERRVGSGSVVAAATRLSPGRRGAGA PRRGGGAPRLSRRGEAMQAGGGVREQLVPRPFAPGVPETRTFPLATWERLQRQVLKEY GARALTHGDPQGAEPLRQAIADYVNLERGARATADRVLVLTSSQQALGLCASVLLDAG ERIFVEDPAYYGARKAFEAAGLECLPVPVDEQGLRPEPILAQPQAARALCLTPSHHYP TGVTLSLERRLALIEWAQRQQAWIIEDDYDSEFHYAGRPTACVQGLDAHERTLYIGTF TKSLFPGLRIGYMVLPPALVAPMTVARSLQDGHNASLAQLTLARFIAGGHFGAYVRGM RNLYGERLGFLAERVGKRLGGLVEPRVPAGGLQMPGLLCAGIDETRAIAAAYRAGVEL VGLSALHLAAPPRAGFLMGFAAYTTDELEAAVGVLAKTLRGLRANP" misc_feature complement(4660575..4661993) /locus_tag="PA4165" /note="DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; Region: ARO8; COG1167" /db_xref="CDD:440781" gene 4662185..4662643 /locus_tag="PA4166" /db_xref="GeneID:880223" CDS 4662185..4662643 /locus_tag="PA4166" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_252855.1" /db_xref="GeneID:880223" /translation="MQSLHTLVSVRPVAHEDFEQWLEYWKAYQAFYEVELSAQATEAT WRRFFDEGEPMHCAVASDGSRLHGIVNFLYHRSTWAAQDVCYLEDLYVSPDVRGQQIG KQLIEYVRRQAEERRCARLYWHTQESNHRAQRLYDWVADKPGVIEYRIEL" misc_feature 4662206..4662592 /locus_tag="PA4166" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" gene complement(4662693..4663511) /locus_tag="PA4167" /db_xref="GeneID:880245" CDS complement(4662693..4663511) /locus_tag="PA4167" /EC_number="1.1.1.274" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="2,5-diketo-D-gluconate reductase B" /protein_id="NP_252856.1" /db_xref="GeneID:880245" /translation="MSSTIHPLPSFGLGTFRLTGQVVVDSVRSALELGYRAIDTAQIY GNEADIGRAIAESGVPRSELFLTTKVWVDNYAREKLLASLRESLEKLRTDRLDLVLIH WPAPGNGVELGEYMAALAEAKSLGLTRRIGVSNFNIELTRQAIAAVGAGEISTNQIEL SPYLQNRALTAYLEEQGIAVTSYMTLAYGKVLKDPTLAGIAARHRATVAQVALAWAMQ LGYAVIPSSTRRENLASNLLARDLRLDAEDMARIAGLERNGREVSPQGLAPAWD" misc_feature complement(4662696..4663496) /locus_tag="PA4167" /note="2,5-didehydrogluconate reductase DkgB; Region: dkgB; PRK11172" /db_xref="CDD:183012" misc_feature complement(order(4662804..4662809,4662816..4662818, 4662825..4662842,4662885..4662887,4662921..4662923, 4662945..4662965,4663041..4663043,4663107..4663112, 4663203..4663208,4663305..4663307,4663380..4663385, 4663395..4663397,4663464..4663472)) /locus_tag="PA4167" /note="putative active site [active]" /db_xref="CDD:381365" misc_feature complement(order(4663206..4663208,4663305..4663307, 4663380..4663382,4663395..4663397)) /locus_tag="PA4167" /note="catalytic tetrad [active]" /db_xref="CDD:381365" gene 4663854..4666262 /gene="fpvB" /locus_tag="PA4168" /db_xref="GeneID:880246" CDS 4663854..4666262 /gene="fpvB" /locus_tag="PA4168" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="second ferric pyoverdine receptor FpvB" /protein_id="NP_252857.1" /db_xref="GeneID:880246" /translation="MKHVVSSALLLGLSSLSLAAQAAPIALDLPAQPLAASLEQLQGA SGLRIRFDRAAVADRRAPALRGTLEPSEALQRLLAGSGLSGEVRGGDAWVEAAATGAG IAPGDSVDLGALSVVATQDPATAAITEDSGSYTTRAMRTSTKLAMSIRETPQSVSVVT RQRMDDQGMRDLNDAVKGVTGLTVQQYGPARVKYAARGFDVDNIMYDGLPTSISTYTQ DVISAADLAMFDRVEVVRGATGLMQGAGNPAAAINMVRKRPTQEFRASLQGSVGTWDR YRSEADVSGPLNSEGTLRGRAVVAYQKGNSFQDHVSSERGVFYGIAEADLSPDTTFAI GASNQNDNRNDNWVGLPSPLGGRHLDLKRSSYYGADWSYWDTDTTHLFSDLTHRFANG WQMKLAADKLWARINMLGLYNDCYYSTTGCASMTQNPGDYSYTDDHDSYDAYANGPFQ LLGREHELVVGASYRQERFDGHGGWGSLFNKDGTPTGPMDPTQWDPSSTLKPRLNTSL WGMKLDQEQKGAYLTTRLNLADPLKVILGGRLDWYKADADTDSYKVTRNVTRYAGVIY DLNQTYSVYASYTDIFKPQSNFDAGGGLLDPITGKNYEIGLKGEHFGGALNSQIALFQ IDQENRATEDVGGPSPCPFSPTSRYCSRASGKVRSQGVDLELSGALSDDWQMMAGYTY VDAKYKHDSNKANEGKPFDAAKPRHLFKLATSYTLPGELHKWRVGGDLATQSKTEDSS TGFQQGGYTVVNAMLGYKVNERIDTRLNFNNLFDKYYYSGIDFGNLNYGEPRNLMFTV KYSL" misc_feature 4664004..4664135 /gene="fpvB" /locus_tag="PA4168" /note="Secretin and TonB N terminus short domain; Region: STN; smart00965" /db_xref="CDD:198033" misc_feature 4664073..4666256 /gene="fpvB" /locus_tag="PA4168" /note="Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]; Region: FhuE; COG4773" /db_xref="CDD:443805" gene complement(4666327..4666755) /locus_tag="PA4169" /db_xref="GeneID:880249" CDS complement(4666327..4666755) /locus_tag="PA4169" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252858.1" /db_xref="GeneID:880249" /translation="MRNDTRLSRMLHVLIHMARHEGPATSEAIGQMLGTNPVVVRRTM ALLKNEGYVSSEKGHRGGWRLAKPLADITLLDIHQALGASSIFAIGLSTDHPECLVEQ AVNEALGEAFEAAQALLLERLGSVTLEQLASEFERRYRPC" misc_feature complement(4666354..4666746) /locus_tag="PA4169" /note="Iron-dependent Transcriptional regulator; Region: Rrf2; pfam02082" /db_xref="CDD:396591" gene 4666836..4667768 /locus_tag="PA4170" /db_xref="GeneID:880250" CDS 4666836..4667768 /locus_tag="PA4170" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252859.1" /db_xref="GeneID:880250" /translation="MKLTLFRDYPNGRYAMTFDVIIVGGSYAGISAGMQLARARRRVL VMDTGLRRNRFARASHGFLGQDGRDPAAIADDARAQLLAYPSVEWLSEAAVAAKKEAD GFVVKAANGERFTARRLILASGVADELPEIPGLAERWGRHVFHCPYCHGYELDGGPIG VLAASPLAIHHALMLPDWGATTFFLNGVFEPDAEQMSRLDRRGVTIEREAVVALGGAR ADVTLASGRTITLAGLFTQPRTRMASPLAALLGCEFEDGPSGPFIRTDGMRETSVPGV FACGDAALAAGNVAIAVGDGARTGGAAHHSLLFR" misc_feature 4666887..4667756 /locus_tag="PA4170" /note="Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; Region: TrxB; COG0492" /db_xref="CDD:440258" gene 4667904..4668467 /locus_tag="PA4171" /db_xref="GeneID:880275" CDS 4667904..4668467 /locus_tag="PA4171" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="protease" /protein_id="NP_252860.1" /db_xref="GeneID:880275" /translation="MSAKLQGKNVLVITANTGIERDELLEPLKTLKQQGATVTHATIE GGEAQTWVHDSEKDLIVNSDARLQGLRAEDYDLLLVPGGTVNADTLRQDSEARRLVRE FSEAGKTVAAICHGPWLLIDAGVARGKTLTSYSSVRIDLTNAGADWVDTRVKVCPANG WTLITSRNPGDLQAFNEAIGEALQAAA" misc_feature 4667931..4668455 /locus_tag="PA4171" /note="intracellular protease, PfpI family; Region: PfpI; TIGR01382" /db_xref="CDD:273591" misc_feature 4668243..4668248 /locus_tag="PA4171" /note="proposed catalytic triad [active]" /db_xref="CDD:153228" misc_feature 4668243..4668245 /locus_tag="PA4171" /note="conserved cys residue [active]" /db_xref="CDD:153228" gene 4668490..4669290 /locus_tag="PA4172" /db_xref="GeneID:880276" CDS 4668490..4669290 /locus_tag="PA4172" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="nuclease" /protein_id="NP_252861.1" /db_xref="GeneID:880276" /translation="MDTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDAR FPAAALEKAGYGAIWQGQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDG LLVASLYLPNGNPQPGPKFDYKLAWFEHLIRHAAELMESGHPVVLAGDFNVVPSDFDI YDTRSWKKDALLQPESRECFERLLRQGWVDALRQRFPDRRLYTFWDYFRQHWQRDAGL RIDHLLLSASLADHLEDAGVDRWVRGEEHASDHAPAWVSLRRPSEPRR" misc_feature 4668499..4669263 /locus_tag="PA4172" /note="Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases; Region: ExoIII-like_AP-endo; cd09086" /db_xref="CDD:197320" misc_feature order(4668517..4668519,4668598..4668600,4668814..4668816, 4668823..4668825,4668937..4668939,4668943..4668945, 4669240..4669242) /locus_tag="PA4172" /note="putative phosphate binding site [ion binding]; other site" /db_xref="CDD:197320" misc_feature order(4668517..4668519,4668598..4668600,4668814..4668816, 4668937..4668939,4668943..4668945,4669150..4669152, 4669237..4669242) /locus_tag="PA4172" /note="putative catalytic site [active]" /db_xref="CDD:197320" misc_feature order(4668523..4668528,4668532..4668540,4668598..4668600, 4668676..4668681,4668814..4668816,4668823..4668825, 4668829..4668831,4668847..4668849,4668937..4668939, 4668943..4668945,4669099..4669101,4669108..4669113, 4669141..4669143,4669147..4669152,4669228..4669233, 4669240..4669242) /locus_tag="PA4172" /note="active site" /db_xref="CDD:197320" misc_feature order(4668523..4668525,4668598..4668600,4669237..4669242) /locus_tag="PA4172" /note="metal binding site A [ion binding]; metal-binding site" /db_xref="CDD:197320" misc_feature order(4668523..4668528,4668532..4668540,4668676..4668681, 4668814..4668816,4668823..4668825,4668829..4668831, 4668847..4668849,4669108..4669113,4669228..4669233) /locus_tag="PA4172" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:197320" misc_feature order(4668814..4668816,4668823..4668825,4668937..4668939, 4668943..4668945,4669099..4669101,4669141..4669143, 4669147..4669149,4669240..4669242) /locus_tag="PA4172" /note="putative AP binding site [nucleotide binding]; other site" /db_xref="CDD:197320" misc_feature order(4668814..4668816,4668937..4668939,4668943..4668945, 4669240..4669242) /locus_tag="PA4172" /note="putative metal binding site B [ion binding]; other site" /db_xref="CDD:197320" gene complement(4669322..4669720) /locus_tag="PA4173" /db_xref="GeneID:880286" CDS complement(4669322..4669720) /locus_tag="PA4173" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252862.1" /db_xref="GeneID:880286" /translation="MTVRDVVFPAGRQALYERNRYSPAVRSDGLLFVSGQVGSRDDGS PEPELETQVRRAFDNLNAVLAAAGCGFDDVLDVTVFMVDAEANFERIWKIVPEYWGEA PYPTLTAVGVNWLYGFSFEIKVVARLPEGR" misc_feature complement(4669337..4669666) /locus_tag="PA4173" /note="YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no...; Region: YjgH_like; cd02198" /db_xref="CDD:100005" misc_feature complement(order(4669346..4669348,4669352..4669354, 4669358..4669360,4669385..4669411,4669424..4669426, 4669436..4669438,4669445..4669447,4669481..4669483, 4669487..4669489,4669493..4669498,4669502..4669504, 4669616..4669621,4669625..4669627,4669631..4669633, 4669640..4669642,4669646..4669648,4669655..4669660)) /locus_tag="PA4173" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100005" misc_feature complement(order(4669358..4669360,4669400..4669402, 4669445..4669447,4669457..4669459,4669658..4669660)) /locus_tag="PA4173" /note="putative active site [active]" /db_xref="CDD:100005" gene 4669861..4670784 /locus_tag="PA4174" /db_xref="GeneID:880287" CDS 4669861..4670784 /locus_tag="PA4174" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252863.1" /db_xref="GeneID:880287" /translation="MDRFDAMQAFARVVDTGSFTKAAETLHMSRTSVTQLVQQLEARL RVRLLNRTTRKLNLTADGAAYYERVVRLLAELDDAETSLSSAALAPRGRLRIDVPSPL ARLLLIPALPEFHARYPEIQIDLGVSDRLVDLIDENVDCVIRGGELRDQSLMARRVGD LQLGVYAAPAYLQRAGVPSHPRELEDSHQRIVGFLWARTGKALPYAMRRGEECLRVAG RHVLAVDDGNAYLAAGLAGLGILWLPHYMAREPLARGELLPLFEDWSLEPMPLYLAFP PNRHVSGKLRVFIEWVAELIARHAPPLHPPL" misc_feature 4669885..>4670319 /locus_tag="PA4174" /note="selenium metabolism-associated LysR family transcriptional regulator; Region: LysR_Sec_metab; NF040786" /db_xref="CDD:468737" misc_feature 4670134..4670745 /locus_tag="PA4174" /note="The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold; Region: PBP2_CrgA_like_3; cd08472" /db_xref="CDD:176161" misc_feature order(4670164..4670166,4670176..4670178,4670293..4670295, 4670335..4670337,4670341..4670343,4670539..4670541, 4670590..4670592,4670671..4670673) /locus_tag="PA4174" /note="putative effector binding pocket [active]" /db_xref="CDD:176161" misc_feature order(4670167..4670172,4670182..4670187,4670191..4670196, 4670203..4670205,4670215..4670217,4670221..4670241, 4670428..4670430,4670521..4670535,4670554..4670559, 4670566..4670568) /locus_tag="PA4174" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176161" gene 4671319..4672707 /gene="piv" /locus_tag="PA4175" /db_xref="GeneID:880208" CDS 4671319..4672707 /gene="piv" /locus_tag="PA4175" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="endopeptidase IV" /protein_id="NP_252864.1" /db_xref="GeneID:880208" /translation="MHKRTYLNACLVLALAAGASQALAAPGASEMAGDVAVLQASPAS TGHARFANPNAAISAAGIHFAAPPARRVARAAPLAPKPGTPLQVGVGLKTATPEIDLT TLEWIDTPDGRHTARFPISAAGAASLRAAIRLETHSGSLPDDVLLHFAGAGKEIFEAS GKDLSVNRPYWSPVIEGDTLTVELVLPANLQPGDLRLSVPQVSYFADSLYKAGYRDGF GASGSCEVDAVCATQSGTRAYDNATAAVAKMVFTSSADGGSYICTGTLLNNGNSPKRQ LFWSAAHCIEDQATAATLQTIWFYNTTQCYGDASTINQSVTVLTGGANILHRDAKRDT LLLELKRTPPAGVFYQGWSATPIANGSLGHDIHHPRGDAKKYSQGNVSAVGVTYDGHT ALTRVDWPSAVVEGGSSGSGLLTVAGDGSYQLRGGLYGGPSYCGAPTSQRNDYFSDFS GVYSQISRYFAP" misc_feature 4672051..4672578 /gene="piv" /locus_tag="PA4175" /note="V8-like Glu-specific endopeptidase [Posttranslational modification, protein turnover, chaperones]; Region: eMpr; COG3591" /db_xref="CDD:442810" gene complement(4673038..4673319) /gene="ppiC2" /locus_tag="PA4176" /db_xref="GeneID:880209" CDS complement(4673038..4673319) /gene="ppiC2" /locus_tag="PA4176" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase C2" /protein_id="NP_252865.1" /db_xref="GeneID:880209" /translation="MARATARHILVSSEAKCNELKTAIEGGADFAEVAREHSSCPSGR DGGNLGSFGPGQMVREFDQVVFSAPLNVVQGPVKTQFGYHLLEVTSRQD" misc_feature complement(<4673041..4673313) /gene="ppiC2" /locus_tag="PA4176" /note="Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, chaperones]; Region: SurA; COG0760" /db_xref="CDD:440523" gene 4673462..4673863 /locus_tag="PA4177" /db_xref="GeneID:880255" CDS 4673462..4673863 /locus_tag="PA4177" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252866.1" /db_xref="GeneID:880255" /translation="MSQTFHGSCLCGALHYRLSSPPRALSHCHCGQCRKAHGAAFASY GSVPVADLHIDHGADLLAAFRSSPAVLRRFCSRCGSPLFWSRSEGEFADWVSVALGSL DTPFPAAKQKHVQVASMACWCRIADDWPRFD" misc_feature 4673468..4673860 /locus_tag="PA4177" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3791" /db_xref="CDD:443005" protein_bind complement(4673814..4673826) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4673963..4674706 /locus_tag="PA4178" /db_xref="GeneID:880256" CDS 4673963..4674706 /locus_tag="PA4178" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252867.1" /db_xref="GeneID:880256" /translation="MSATALYTDLSHYYDLMCADIDYQAQSHCVRRLHQLFGNQGRRH LDLACGTGPHVRHFLDFGYRSAGLDINQPMLDLARQRCPEAHFSRQDMAGFQVDEPLD LITCFLYSIHYNAGLERLRACLASVHGALADGGVFCFNTVDKGQIDNRSFVRHSVEHR GSRFTFGSGWYYSGEGERQALRLGIEKTTDGTTQTWEDEHPMVALGFAELQHLLQTHF EVQVFEHDYERITPWAGSSGNALFVCVKR" misc_feature 4673975..4674439 /locus_tag="PA4178" /note="Predicted methyltransferase, contains TPR repeat [General function prediction only]; Region: COG4976" /db_xref="CDD:444001" gene 4674944..4676239 /locus_tag="PA4179" /db_xref="GeneID:880312" CDS 4674944..4676239 /locus_tag="PA4179" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="porin" /protein_id="NP_252868.1" /db_xref="GeneID:880312" /translation="MSSPFSPRSPRTLRGLGALALCGGFVAPAPAAFLEDGSARLEAR TVYFNRDFRDGSSANPQGASKREEAAQGFILDLRSGYTEGALGFGVDTLAMLGIKLDS SPADSNSGLLPSSGHDPRRSVDQYAKAGVAGKMRFSQTQFRYGAMLPDMPLLKYNDGR LLPTLFHGAQLTSEEIAGLRFSATRLERYTARDSSDAQDIRLHCKNKRYACDTTGNRF DAYQLDYQVNDGLLLQYAQGGLRNVYRQRYLGAVGKRQVGAGKLSADLRWFDSEDAGA ARAGKIDNRALSLLLAYAQGGHTLSAGWQRMNGASSMPYLDGSNPYLANYLQVNDFAN PEERSWQLRYDFDLRSVGVPGLSFMTRYVNGDHIRLANGDEGKEWERDIELKYIVQSG RFKDLSLRLRNATYRTDFERSARDVDEVRLIASYNLSLF" misc_feature 4675034..4676230 /locus_tag="PA4179" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene complement(4676282..4677925) /locus_tag="PA4180" /db_xref="GeneID:880313" CDS complement(4676282..4677925) /locus_tag="PA4180" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetolactate synthase" /protein_id="NP_252869.1" /db_xref="GeneID:880313" /translation="MAKAADVVVQCLENEGVQYVFGIPGEENLDLLESLRKSQIRLVL TRHEQSAGFMAATYGRLTGKTGVSLSTLGPGATNLVTAGAYAYLGGMPMLMITGQKPI KKSKQGRFQILDVVGMMQPLTKYTHQLASADNIPSRVREAFRLAEEEKPGAVHLELPE DIAAEQTDSLPIPPSLSRRPLAEYKAICAAVEKLRAARSPILVIGAGANRKMTAKVLK QLIDKTGIPFVTTQMGKGVVDERHPRFLGNAALSAGDFVHRAVEAADLIVNVGHDVIE KPPFFMVRGGTEVIHVNFRSAEVDPVYFPQIEVVGDIANAIWQIGEALDDTAHWDFTR LLAIREANEAQVAEGADDPRFPLYPQRLVADVRRALPSQGIVALDNGMYKIWFARNYK AHMPNTVLLDNALATMGAGLPSAMAAHLVYPDRPIVAVCGDGGFMMNSQELETAVRLK MNLTVIILRDNGYGMIRWKQSNMGFADFGLDYGNPDFVHYAEAYGAHGHRVDSAEGFL PLLERCLGTPGVHVIDCPVDYSENDRILNVELRERALAV" misc_feature complement(4676285..4677919) /locus_tag="PA4180" /note="acetolactate synthase large subunit; Region: PRK08322" /db_xref="CDD:236239" gene 4678210..4678929 /locus_tag="PA4181" /db_xref="GeneID:880292" CDS 4678210..4678929 /locus_tag="PA4181" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252870.1" /db_xref="GeneID:880292" /translation="MPEHAPILPVIAAEVAALAPGFRALSLTVEAAPIVRPEIAGRAV ERACQALARGEPDWAEAHLAAWAEAFRRFGAKPQRTPCSAEALRKRALRDGGLPSIDP VVDLYNAISVQFAIPVGGENLAAYAGPPRLVVADGSETFDTLKNGEALDESPDPGEVV WRDDLGVTCRRWNWRQGVRTRLDASARRMWFILESLPEMPLAALHEAGGLLLDELRLM MPGMRADSRLLCVATESADSV" misc_feature 4678234..4678920 /locus_tag="PA4181" /note="B3/B4 domain (DNA/RNA-binding domain of Phe-tRNA-synthetase) [General function prediction only]; Region: B3/B4; COG3382" /db_xref="CDD:442609" gene 4678957..4679595 /locus_tag="PA4182" /db_xref="GeneID:880293" CDS 4678957..4679595 /locus_tag="PA4182" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252871.1" /db_xref="GeneID:880293" /translation="MYLPSHFEESDPQALHALIRDYPLGLLVSHGEAGLDANHLPFEL SPAKGAQGTLEAHVARNNPVWSELRDGDEVLVVFRAGDAYISPQWYPSKQEHHRQVPT WNYRVVHAHGRVRIRDDERYVRGLVARLTRTHEATQETPWKMTDGPADYIDEMLRLIV GIEIEITRLVGKFKLSQNKEARDIRGASAALLARGEQAIGAAMDDCAARRDG" misc_feature 4678960..4679550 /locus_tag="PA4182" /note="Predicted FMN-binding regulatory protein PaiB [Signal transduction mechanisms]; Region: PaiB; COG2808" /db_xref="CDD:442058" gene complement(4679599..4680066) /locus_tag="PA4183" /db_xref="GeneID:880295" CDS complement(4679599..4680066) /locus_tag="PA4183" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252872.1" /db_xref="GeneID:880295" /translation="MLERTFRPGLRRSCAMSQPFLWRRVNDSSGFAEPRVFIRVYLEP GSIDAAIAFYEDLQGVAHDMRFDFPEKRLTLAAVGAFLLLEGSDEALAPFRSTTGTLL VDDIEPYHRRLLAAGAQIIFGPARAPTGACFNALLPDGTVVEFVHHRPQPGEA" misc_feature complement(4679617..4679961) /locus_tag="PA4183" /note="Catechol 2,3-dioxygenase or related enzyme, vicinal oxygen chelate (VOC) family [Secondary metabolites biosynthesis, transport and catabolism]; Region: GloA; COG0346" /db_xref="CDD:440115" gene complement(4680092..4681114) /locus_tag="PA4184" /db_xref="GeneID:880296" CDS complement(4680092..4681114) /locus_tag="PA4184" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252873.1" /db_xref="GeneID:880296" /translation="MERRRFSAALQGQNLRFTGAGEGGSARARVGFLLLEHFSLPAFT QALDTLVTANLIRSESFAVSNFSLSGEPVTSDLGLLICPDLALASAALQGLDLLVVCG GLRTPLRSSAALREALQDVASRGVALAGLWNGAWFLGDAGLLDGYRCCIHPEHRAALA EIARNSQVTSDSYMVDRDRLTAASPTGAFNLALEWIARRHGRDLVEAVVDILAFEESR YRRVRPALHEKMSEPLREVINLMSANIEEPLSQEQLAHYVGRSRRQIERLFQQQLGTT PVRYYLELRITECRRLLQHSDLTMLEVLVACGFVSPSHFSKCYTAFYGYPPSKEVRYG NVRSTK" misc_feature complement(4680131..4681030) /locus_tag="PA4184" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene 4681421..4682149 /locus_tag="PA4185" /db_xref="GeneID:880485" CDS 4681421..4682149 /locus_tag="PA4185" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252874.1" /db_xref="GeneID:880485" /translation="MKAQPDVDSNSADAPFDRKAVLGDALRRRILSMELAPGAVVDEL ALCDEFGLSRPPVRELLRQIAAEGYIELEANRAPRVAAMSHDSLHAFFLAAPLIYIAT TQLAATHASEAEIETLKAIQEDFRKAIEEKHVENRVIHNDAFHLEIGRMAHNDYLMPS LRRLLIDHARLGKIFYRHPTTDDMQRDLELACDQHDQIVDAIQRRDPDAAADIVRAHF ELSRRRMAEYAAPAGVEVALVYEG" misc_feature 4681490..4682110 /locus_tag="PA4185" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: GntR; COG1802" /db_xref="CDD:441407" gene 4682242..4683561 /locus_tag="PA4186" /db_xref="GeneID:880486" CDS 4682242..4683561 /locus_tag="PA4186" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252875.1" /db_xref="GeneID:880486" /translation="MTKVTHLPADDRSCGWYHLSPPRRPKPAHYGRSAARWVVVGAGF TGLAAARQLALHFPDEEIVLVEAQEVGFGTAGRNAGFAIDLPHDIGADDYIGDIATAR IGLKLNLAGQSLLREQVQRHAIDCQMKACGKYQAAVEARGVAVLDAYRRGLDRLGQAY EVIEADDLPGNIGTAFYRKALFTPGTLLVQPSALVKGLADSLPGNVSLYEHTPITAVE YGDRTLLSHPHGSILADRLVLANNAFGMSFGFLQGRMLPIFTYASLTRPLDAEEQARL GGRPYWGLIPANPYGTTVRRTPDNRLLIRNSFSFNPDGRSAGKYLERFAVRHRASFRQ RFPMLPEVGFDYTWGGSLALSRNHMGHFGELAPNVYGALCCNGLGVTRGTVTGKLLAD WLAGERNELIDFLLRAPGPSGNPPEPLLSLGVNLNLRWGQYRAGRES" misc_feature 4682344..4683444 /locus_tag="PA4186" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" gene 4683697..4685025 /locus_tag="PA4187" /db_xref="GeneID:880334" CDS 4683697..4685025 /locus_tag="PA4187" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_252876.1" /db_xref="GeneID:880334" /translation="MTNPTTSIEDVPLNAFHRLLTLRSGGGSFVDGYVLSIIGVAMLQ MTAALQLSSFWQGMIAASALVGIFFGGFLGGWLTDRLGRRRLFFVGPSLFVLASLAQY GVDSAAALFVLRFLIGVAVGIEYPVATALLVEFLPKKYRGPRLATLTILWFAGAAFAY LVGDLILRSGGEDAWRLVLASTAAIGAVLFLLRIGTPESPRWLLSKGRDADAERVIRQ VYGEAFSLENLPEQALERKVTIWHLLYAGYGKRMLFVTLFWTCSVIPVFAVYAFAPKV LLALNLKGDWASYGSVAITLLFVIGCIIATRLINRIGRRCMLLHSFLWSGLALLGLGV FHAGSEATILGLFGAYALFIGGAQVLQLVYPNELFPTEIRAFAVGVGTSLSRVGAAVG TYLVPLSLETLGTAQTMYAAALVTLLGLLVTWALAPETRSLNLQQAASLT" misc_feature 4683757..4684923 /locus_tag="PA4187" /note="Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; Region: MFS_SV2_like; cd17316" /db_xref="CDD:340874" misc_feature order(4683787..4683792,4683799..4683804,4683811..4683813, 4683907..4683909,4684057..4684062,4684066..4684074, 4684081..4684083,4684141..4684143,4684150..4684155, 4684162..4684164,4684471..4684473,4684480..4684485, 4684492..4684500,4684507..4684509,4684588..4684590, 4684600..4684602,4684753..4684758,4684768..4684770, 4684780..4684782,4684828..4684830,4684837..4684842, 4684849..4684854,4684861..4684863) /locus_tag="PA4187" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340874" gene 4685090..4686001 /locus_tag="PA4188" /db_xref="GeneID:880335" CDS 4685090..4686001 /locus_tag="PA4188" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252877.1" /db_xref="GeneID:880335" /translation="MKFEGIYTPAITPLSADGSIDTQAFAEVLEFLVESKVHGIVIGG STGEYYAHTAEERLALAAHASEVIAGRLPLVVGTGAIRTEDSLAYAEAARAIGADAIL VGSPPYALPTSREIAEHVLAVDRAAGLPIMLYNYPARMGVEMDEAFFAAVAGCRNIVA IKESSGSTAQLHRLACRHPRIALSCGWDDQALEFFAWGARSWVCAGSNFIPGEHLALY QACVVENDFAKGRRIMAAMMPLMDFLESGHFVQSIKHGCELAGLRAGGVRAPLKALDE AGKAALAEIVARLKGEVARIVEGGRHD" misc_feature 4685093..4685959 /locus_tag="PA4188" /note="4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism, Cell wall/membrane/envelope biogenesis]; Region: DapA; COG0329" /db_xref="CDD:440098" gene 4685994..4687484 /locus_tag="PA4189" /db_xref="GeneID:880328" CDS 4685994..4687484 /locus_tag="PA4189" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase" /protein_id="NP_252878.1" /db_xref="GeneID:880328" /translation="MTELLSREEYAAIAATLDLPQRAFIDGGFRDACGGRTFASTNPA TGELLAQVAACDAEDVGHAVASARRAFEDGRWRSRTPAERKAALLRLAELLEEHLLEL AVMESLDSGKPIRECQHTDLPETINTLRWHAELIDKIYDSTAPVGSAALAMVVREPIG VVGLVLPWNFPLLMLAWKIGPALAAGCSVVVKPAPETSLTALRVAELASQAGIPAGVF NVVPGGGREAGEPLGRHPDVAMVSFTGSTATGRLFLKYAAESNLKRVVLECGGKNPAV VMNDVEDLDLVAQHVVNGAFWNMGENCSASSRLIVHAEVREALLERIGAQLREWRMGD PLDPRNRLGALVSPAHFEKVRAYLDQARTERLAVRFGGATEAGIFVEPTVVDGVSPHS RLFREEIFGPLLSVTSFDDIDEAIALANDTVYGLAASAYTGSLRHALRLSREIRAGIV TVNCFGEGDASTPFGGYKESGFGGRDKSVWAHDQYTELKTIWIDAS" misc_feature 4686096..4687472 /locus_tag="PA4189" /note="Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like; Region: ALDH_GABALDH-PuuC; cd07112" /db_xref="CDD:143430" misc_feature order(4686486..4686500,4686522..4686524,4686567..4686569, 4686573..4686578,4686720..4686731,4686738..4686740, 4686747..4686752,4686795..4686803,4686900..4686902, 4687185..4687187,4687191..4687193,4687269..4687271, 4687383..4687385) /locus_tag="PA4189" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:143430" misc_feature order(4686498..4686500,4686795..4686797,4686891..4686893, 4686900..4686902) /locus_tag="PA4189" /note="catalytic residues [active]" /db_xref="CDD:143430" gene 4687652..4688848 /gene="pqsL" /locus_tag="PA4190" /db_xref="GeneID:880329" CDS 4687652..4688848 /gene="pqsL" /locus_tag="PA4190" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="monooxygenase" /protein_id="NP_252879.1" /db_xref="GeneID:880329" /translation="MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAIN GADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGELLRYFNYSSVDARGYFIL MPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGA DGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAERNRLYVDSQGGLAYFYPIGF DRARLVVSFPREEARELMADTRGESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGY LNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALA GYQAERFPVNQAIVSYGHALATSLEDRQRFAGVFDTALQGSSRTPEALGGERSYQPVR SPAPLG" misc_feature 4687652..4688815 /gene="pqsL" /locus_tag="PA4190" /note="putative monooxygenase; Reviewed; Region: PRK07045" /db_xref="CDD:136171" gene complement(4688889..4689893) /locus_tag="PA4191" /db_xref="GeneID:880273" CDS complement(4688889..4689893) /locus_tag="PA4191" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="iron/ascorbate oxidoreductase" /protein_id="NP_252880.1" /db_xref="GeneID:880273" /translation="MSTPSLPIIDIAALAGSDPAARRSVAVRIDRACREQGFFYVVGH GVEAQLVERLERLARQFFALDETSKLRWRMELGGRAWRGYFPLGGELTSNRPDWKEGL YLGSELDAEHPEVRAGTPLHGANLFPEVPGLRETLLEYLDATTRVGHRLMEGIALGLG LEADYFAARYTGDPLILFRLFNYPSQPVPEGLDVQWGVGEHTDYGLLTLLHQDAIGGL QVRTPQGWLEAPPIPGSFVCNLGDMLERMTGGLYRSTPHRVARNTSGRDRLSFPLFFD PNFHARVQPIEGLPEVPEQDDSARRWDQANVHAFHGEYGDYLLNKVAKVFPQLRRDLL " misc_feature complement(4688901..4689893) /locus_tag="PA4191" /note="Isopenicillin N synthase and related dioxygenases [Secondary metabolites biosynthesis, transport and catabolism]; Region: PcbC; COG3491" /db_xref="CDD:442714" gene complement(4689902..4690645) /locus_tag="PA4192" /db_xref="GeneID:880274" CDS complement(4689902..4690645) /locus_tag="PA4192" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_252881.1" /db_xref="GeneID:880274" /translation="MIRLEKVNKWYGAYHALADVDEQVGRGEVVVVCGPSGSGKSTLI RTLNRLEPIQGGRILIDGQDIHAPGLDLNRFRSHIGFVFQQFNLFPHLNVLDNCTLAS LRLRGLKPAEARRQAMALLERVGLADKAAAFPARLSGGQQQRVAIARALAMEPPLMLF DEPTSALDPEMVGEVLLVMRDLARDGMTMVVVTHEMGFAHDVADRVLFMDAGRVLERA SPDDFFNRPQHPRARKFLADIRTPFAQPL" misc_feature complement(4689929..4690645) /locus_tag="PA4192" /note="ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; Region: GlnQ; COG1126" /db_xref="CDD:440743" gene complement(4690642..4691346) /locus_tag="PA4193" /db_xref="GeneID:880355" CDS complement(4690642..4691346) /locus_tag="PA4193" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_252882.1" /db_xref="GeneID:880355" /translation="MTTLELIDSYWLYFLVGQYPNGPLGGLALTLVLASLALLLALPL GILLGLARVSPWRWLRWPVTALVFVVRGVPLLMVIFWAYFFLPTLTGQRTDQFTTMLL ALVLFDAVYLAEIVRAGIQGLDRGQFEAARSLGLGYLASMRLVVLPQALRNMLPSLVN QFVSTIKETSLGYIIGLAEVSFIASQINTQVFTLPTQVYLILGLTYFILCFGLSRFAF WLERRQAQRGNPKEAR" misc_feature complement(4690666..4691193) /locus_tag="PA4193" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" gene complement(4691343..4692041) /locus_tag="PA4194" /db_xref="GeneID:880356" CDS complement(4691343..4692041) /locus_tag="PA4194" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_252883.1" /db_xref="GeneID:880356" /translation="MFEFDFSLLLRGQYHEMLVAGLLLSLKLAAVTLVFAVPLAMLVA LLRLAPFRALQWLGFAYVESIRNVPLLAHMLFWYFAAPEWLPEDLKAWLYAGNIEAAS AIVALTLYTAAFMSEDMRSGIRAVPTVQLEAARALGFGYLASMRLVILPQALRITVPP LISQTLNLWKNTSIATVIGVAELMYQAGQVESSTFRSFESFAFATAAYLSVSLLITGA AAWYQQRYPGVERR" misc_feature complement(4691364..4692032) /locus_tag="PA4194" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" gene complement(4692126..4692956) /locus_tag="PA4195" /db_xref="GeneID:880469" CDS complement(4692126..4692956) /locus_tag="PA4195" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_252884.1" /db_xref="GeneID:880469" /translation="MKIRLLGAALAAVFTLIGSAAHADDLADIRKKGEIVIGTLGTDE PNSFIDPKTRQIIGYEVDLGTEIAKAIGVKPVFKQISVAARIPELQQGHVDLLAASLT HNKEREALVDFSYSIIVTGQKALVKKNAGFASLHDLDGKKVLTVKGGTQEPNIRKALP NAQVVTFETSQQALLALQQGKGQAFVDDESALVNDFGKLGAAAGGYAILPENLSTEAL AIAFRKGNPQLKQLVDSTLAGLERSGAAEQLYLKWYGPGTKSNLSERHFKIDSDRIPE " misc_feature complement(4692192..4692881) /locus_tag="PA4195" /note="Substrate binding domain of ABC glutamine transporter from Bacillus subtilis; the type 2 periplasmic-bindig protein fold; Region: PBP2_BsGlnH; cd13689" /db_xref="CDD:270407" misc_feature complement(order(4692303..4692305,4692393..4692398, 4692507..4692512,4692636..4692638,4692657..4692659, 4692702..4692704,4692828..4692830,4692837..4692839)) /locus_tag="PA4195" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:270407" misc_feature complement(order(4692441..4692443,4692450..4692452, 4692795..4692797,4692810..4692812)) /locus_tag="PA4195" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:270407" gene complement(4693112..4693756) /gene="bfiR" /locus_tag="PA4196" /db_xref="GeneID:880470" CDS complement(4693112..4693756) /gene="bfiR" /locus_tag="PA4196" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein BfiR" /protein_id="NP_252885.1" /db_xref="GeneID:880470" /translation="MAMPDEALVYVVDDDQGMLESTVWLLESVGLKARPFTQGRDFLD ACEGGRHACVLLDVRMPGMGGLNVQDELLARGIDLPVIFVSGHADVPIVVRAFKAGAV DFIEKPYNEQLLLDSVQQALDRHARRRRHHDLDAGLHERLDSLTPRERDVLLPLVRGY TSREVAEQLEVSVKTVDLYRARVMKRMQAQTLPELVGMAIAAGLVDPLRLREGT" misc_feature complement(4693148..4693735) /gene="bfiR" /locus_tag="PA4196" /note="DNA-binding response regulator, FixJ family, consists of REC and HTH domains [Signal transduction mechanisms, Transcription]; Region: FixJ; COG4566" /db_xref="CDD:443623" gene complement(4693759..4696035) /gene="bfiS" /locus_tag="PA4197" /db_xref="GeneID:880350" CDS complement(4693759..4696035) /gene="bfiS" /locus_tag="PA4197" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein BfiS" /protein_id="NP_252886.1" /db_xref="GeneID:880350" /translation="MSPLPASPALNSLLRLLREGAPLVERVGALRRLLLEHPGTRQAW YLAWQPQAQTYTPVPPSPALPPGAGEPNRASDLALRERLVRDGRLALDELRRSASWLG ARLRRAGVEHGMAFALDLQAGDEGLLLVASDTPQSAALDWLGLLLAPLLAAARGVTRA APFLAADPQPALLLDGEAQAVELNQAFLALLGERPREAWRAYLPANHGQLVRASLGQA RALGEVEAECDGRILLWQFIPDSAEARVLARCRDATASLRGEREAARASRLYRLITEN TTDLISRHTLDGIFLDASPASWTLLGYWPEELRGRPAQALFHPQDRGQVALRAREALE QDGYLTITYRIRHRDGRYRWFETASRAIRETYTGAVVEVVSVSRDVTRRVEAEENRRR LAEVVEANTDLVLFVEHGGRVTYLNPSARAALGIADGQEAPALERLLAGDTPARLAEE GWRQARDGGVWSREGRLQPQDGRPSLPVSLVLLAHRGRGEERYYSLVARDMTERELRE AQQRRHQDELAHTARLVTLGELASGIAHEINQPLAAVMNYASTSQRYLAVLGSQPEAA GRVAEGLARIGEHAGHAAEVIKRLRAFLRKGQRRLQALDLNQVAREAIGLCAWEAGHW QVAVEEAMTDNPPPLYADRVLLEQVFLNLLRNAIEANREAHPGSPSRVVIGSRVEPGG LLCLWVRDQGPGVPADQLEHIFTPFHTSKPEGLGLGLSMSRSIVEGFGGTLEAELPAD GGLLMNCRLPLAAGATGG" misc_feature complement(4695025..>4695999) /gene="bfiS" /locus_tag="PA4197" /note="Predicted ATPase [General function prediction only]; Region: COG3903" /db_xref="CDD:443109" misc_feature complement(4694506..4695258) /gene="bfiS" /locus_tag="PA4197" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature complement(4693780..4694880) /gene="bfiS" /locus_tag="PA4197" /note="Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]; Region: COG4191" /db_xref="CDD:443345" gene 4696281..4697903 /locus_tag="PA4198" /db_xref="GeneID:880351" CDS 4696281..4697903 /locus_tag="PA4198" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA synthetase" /protein_id="NP_252887.1" /db_xref="GeneID:880351" /translation="MSIFEQGLAPAAVNHIALTPLSFIERTASVYPHYPAVIHGNIRR DWAQTYQRCRRLASALAGRGIGQGDTVAVMLPNIPEMLEAHYGVPMIGAVLNTLNVRL DAEAIAFMLQHGEAKVLITDYEFHEVIHAAIGMLDHPPLVVDVNDPEYGEGRPVGELD YEALLAEGDPQFAWEWPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWS MGQHPVYLWTLPMFHCNGWCYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGA PIVLNALINMPDSAKAAIDHPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGP VTVCAWHGEWDDLPLERRAAIKSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFM RGNTVMKGYLKNPSATEEAFAGGWFHTGDLAVCHPDGYIEIRDRLKDIIISGGENIST IELEGVLYRHPAVLEAAVVARPDEKWGETPCAFITLKSDHQGLAESEIVAFCREHLAA FKIPRTVVFSELPKTSTGKIQKYVLREWAAAL" misc_feature 4696281..4697900 /locus_tag="PA4198" /note="acyl-CoA synthetase; Validated; Region: PRK08162" /db_xref="CDD:236169" gene 4698021..4699802 /locus_tag="PA4199" /db_xref="GeneID:880396" CDS 4698021..4699802 /locus_tag="PA4199" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_252888.1" /db_xref="GeneID:880396" /translation="MPEYNAPLRDMRFLLNDVFDAPALWQRLPRLAERIDADTADAIL EEAAKVTGGLLAPLNRSGDEEGAQWQDGAVRTPAGFREAYATYAEGGWVGLTGNPAHG GMGMPKMLAVQFEEMMYAANASFSLYSTLSAGACLALDAHGSEELKNRYLPNMYAGTW AGSMCLTEPHAGTDLGIIRTKAEPQADGSYRISGTKIFITGGEQDLTENIIHLVLAKL PDAPAGSRGISLFLVPKFLVGDDGALGARNAVHCGSIEHKMGIKASATCVMNFDGASG WLVGEVNKGLAAMFTMMNYERLSIGIQGIGCAEMSYQSAVAYARERLQSRAPTGPVAR DKAADPIIVHPDVRRMLLTMKALTEGGRAFSTYVGQQLDLAKYAEDQEERSQAEALVA LLTPVAKAFFTDTGLESCVLGQQVFGGHGYIREWGQEQLVRDVRIAQIYEGTNGIQAL DLMGRKVVANGGLFLSIFSREVRAFAAGANAELAEFVTPLLTALDLLDNLTQGIVARA GNDPREIGAASVEYLHLFGYTAYAYLWARMAAAAQRQREVDPAFHDGKLATARFYFAR ILPRVHSLAAAVEAGSESLYGLEAEQF" misc_feature 4698027..4699769 /locus_tag="PA4199" /note="acyl-CoA dehydrogenase; Provisional; Region: PTZ00456" /db_xref="CDD:185635" gene 4700000..4700866 /locus_tag="PA4200" /db_xref="GeneID:880397" CDS 4700000..4700866 /locus_tag="PA4200" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252889.1" /db_xref="GeneID:880397" /translation="MRTLTTLLGNSQKLDGGAMFGNAPRALWSRWMQPDAENRIDLGC RALLVRDGERNVLVEAGIGAFFPPALRQRYGVQEERHVLLDSLAAVGLDDADIDVVLL THLHFDHAGGLLAAWEEGQPARLLFPNAHFVSGRRHWQRARQPHPRDRASFVPELLDL LQASGRLELLDDGERSAHLGEGWRFHFSEGHTPGQMLPEIAMPDGPVVFSGDLIPGAP WVHLPLTMGYDRFPEGLIEEKERLLDSLIARNGRLVFTHDPCVAMGRVRRDEQERYSL YDTLERVENLEA" misc_feature 4700003..4700770 /locus_tag="PA4200" /note="uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain; Region: metallo-hydrolase-like_MBL-fold; cd16281" /db_xref="CDD:293839" misc_feature order(4700309..4700311,4700315..4700317,4700321..4700326, 4700570..4700575,4700633..4700635,4700768..4700770) /locus_tag="PA4200" /note="putative active site [active]" /db_xref="CDD:293839" gene complement(4700906..4701946) /gene="ddlA" /locus_tag="PA4201" /db_xref="GeneID:879033" CDS complement(4700906..4701946) /gene="ddlA" /locus_tag="PA4201" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="D-alanine--D-alanine ligase" /protein_id="NP_252890.1" /db_xref="GeneID:879033" /translation="MGQDKLKVAVLFGGSSEERDVSIASGAQVIQALRSAGHQVLAVD TASGLLGAEEERRLLASKVKEVPPDSDSLAIIRSGKQSLLSAGELAGVDVFFLALHGG TGEDGTLQALLDAGGFAYTGSGHLASAMAMDKDVAKRLFLAAGVETASWLMAPASEEE VREQLGFPLVVKPNSQGSTVGLSIVHSQAELQPAIELAGRYGDEVMLERFVAGREVTV GVLDDQALPVGEILLGGQEVFDYEHKYQAGAVREVFPADLPPAIAAEAQRLALKVHRA LKLSGYSRTDFRLDEQGRLWCLEVNTLPGMTATSLLPQAAAAAGIGFAELCERICRLG IERCKGARKARS" misc_feature complement(4700957..4701943) /gene="ddlA" /locus_tag="PA4201" /note="D-alanine--D-alanine ligase; Reviewed; Region: ddl; PRK01372" /db_xref="CDD:234948" gene complement(4702042..4703097) /locus_tag="PA4202" /db_xref="GeneID:879034" CDS complement(4702042..4703097) /locus_tag="PA4202" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252891.1" /db_xref="GeneID:879034" /translation="MTDRFTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAIT GSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPP VRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPE EAALVEAAGADAVVAQGIEAGGHRGVFEPERGDAAIGTLALVRLLAARGSLPVVAAGG IMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMSGRS ARGLPNRMFFDAAAPGVPPLPDYPFVYDATKALQTAALARGNHDFAAQWAGQGAALAR ELPAAELLRTLVEELRG" misc_feature complement(4702048..4703073) /locus_tag="PA4202" /note="NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family [General function prediction only]; Region: YrpB; COG2070" /db_xref="CDD:441673" gene 4703205..4704059 /locus_tag="PA4203" /db_xref="GeneID:880443" CDS 4703205..4704059 /locus_tag="PA4203" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252892.1" /db_xref="GeneID:880443" /translation="MDLSSLEIFRAVAHEASVTRAAQRLQRAQSNVTTRIRQLEEDLG VELFLRDGKRMSLTERGSEFLAYAEQLLALADEARQSMHPAEPGGRLRLGSMESTAAS RLPALLASYHKACPRVALEVSTGTSHALFDGVRARRLDCALVAAGPGWAGELDGSGLR GEPLFREELLMILPAEHPPVHDVAEVRLRTLAGFARGCTYRQLAEDSLGTPLTVQEVG SYHAILACVAAGACVGVLPRSVLQLLGTPPLRSLPLAEVDTWLVWREGYATAAFERWR GVLGQAGD" misc_feature 4703205..>4703651 /locus_tag="PA4203" /note="DNA-binding transcriptional repressor LrhA; Provisional; Region: PRK15092" /db_xref="CDD:237907" misc_feature 4703472..4704041 /locus_tag="PA4203" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators, YofA and SoxR, contains the type 2 periplasmic binding fold; Region: PBP2_YofA_SoxR_like; cd08442" /db_xref="CDD:176133" misc_feature order(4703517..4703522,4703526..4703531,4703538..4703540, 4703550..4703552,4703556..4703576,4703844..4703861, 4703877..4703882,4703886..4703891) /locus_tag="PA4203" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176133" gene 4704139..4705305 /gene="ppgL" /locus_tag="PA4204" /db_xref="GeneID:880444" /db_xref="PseudoCap:PA4204" CDS 4704139..4705305 /gene="ppgL" /locus_tag="PA4204" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="gluconolactonase PpgL" /protein_id="NP_252893.1" /db_xref="GeneID:880444" /db_xref="PseudoCap:PA4204" /translation="MRRLPTLCLLALAPLTGVAPQAQAASLYNLLVGTYTEGSSEGIQ VYRFDGADGSVKGPLRVAHTSNPSYLTFAPDQRTLFVVNENGRGGKGDTVGRATSYRF DPISGRLQQISQVQTLADHPTYSSLSHDGRYLFVANYSVQPEGSVAVLPVRADGSLAP VVQVESHQASKVHPRQVSGHVHSVVSSPDGQYLFAPDLGADKVFVYRYAPEQAERPLQ AADPAFVPTPPGSGPRHLIFSADGRFAYLTLELSGQVMVFAHEGNGRLRQLQTHDLAP AGFQGKVGAGALHLSADGRFLGVLNRGDDNQLVTFAVDPASGQLRFVERRSVEGTEPR EFAFSPGGRFVLVANQNSDQLRVFARDPQSGQVGKTLQSVEVGSPSDLRFVAVP" misc_feature 4704223..4705278 /gene="ppgL" /locus_tag="PA4204" /note="7-bladed beta-propeller; Region: Lactonase; pfam10282" /db_xref="CDD:431196" gene 4705956..4706402 /gene="mexG" /locus_tag="PA4205" /db_xref="GeneID:880449" CDS 4705956..4706402 /gene="mexG" /locus_tag="PA4205" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252894.1" /db_xref="GeneID:880449" /translation="MQRFIDNSLESNWLWLTARICLALMFVASGLAKLFDYQASLEEM RAAGLEPAWLFNIATAVTLLAGSALVLLDRKLWLGAGALAVFLLLTILIVHTFWSKTG VEAKLAMFFALEHIAVIGGLIATAIASAQRQRLRQDVSVAATYQKA" misc_feature 4705986..4706318 /gene="mexG" /locus_tag="PA4205" /note="Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown]; Region: DoxX; COG2259" /db_xref="CDD:441860" protein_bind 4706035..4706052 /gene="mexG" /locus_tag="PA4205" /experiment="EMSA [PMID: 22505688]" /note="Transcription factor binding site for NP_251281." /bound_moiety="VqsR" gene 4706410..4707522 /gene="mexH" /locus_tag="PA4206" /db_xref="GeneID:880450" CDS 4706410..4707522 /gene="mexH" /locus_tag="PA4206" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux membrane fusion protein" /protein_id="NP_252895.1" /db_xref="GeneID:880450" /translation="MQKPVLIASAALICAAVIGIAVYATGSAKKDAGGFAGYPPVKVA LASVERRVVPRVFDGVGELEAGRQVQVAAEAAGRITRIAFESGQQVQQGQLLVQLNDA VEQAELIRLKAQLRNAEILHARARKLVERNVASQEQLDNAVAARDMALGAVRQTQALI DQKAIRAPFSGQLGIRRVHLGQYLGVAEPVASLVDARTLKSNFSLDESTSPELKLGQP LEVLVDAYPGRSFPARISAIDPLIGKSRTVQVQALLDNPEGLLAAGMFASIRVSRKAD APSLSVPETAVTYTAYGDTVFVAHQDGDRPLSAKRVSVRIGERWDGRVEILQGLAEGD RVVTSGQINLSDGMAVEPVKEDTLSSAAPPVPVAGR" misc_feature 4706551..4707480 /gene="mexH" /locus_tag="PA4206" /note="Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms]; Region: AcrA; COG0845" /db_xref="CDD:440606" gene 4707535..4710624 /gene="mexI" /locus_tag="PA4207" /db_xref="GeneID:880346" CDS 4707535..4710624 /gene="mexI" /locus_tag="PA4207" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux transporter" /protein_id="NP_252896.1" /db_xref="GeneID:880346" /translation="MTFTDLFVRRPVLALVVSTLILLLGLFSLGKLPIRQYPLLESST ITVTTEYPGASADLMQGFVTQPIAQAVSSVEGIDYLSSTSVQGRSVVTIRMLLNRDST QAMTETMAKVNSVRYKLPERAYDSVIERSSGETTAVAYVGFSSKTLPIPALTDYLSRV VEPMFSSIDGVAKVQTFGGQRLAMRLWLDADRLAGRGLTASDVAEAIRRNNYQAAPGM VKGQYVLSNVRVNTDLTNVDDFREMVIRNDGNGLVRLRDVGTVELGAAATETSALMDG DPAVHLGLFPTPTGNPLVIVDGIRKLLPEIQKTLPPDVRVDLAYETSRFIQASIDEVV RTLVEALLIVVLVIYLCLGSLRSVLIPVATIPLSMLGAAALMLAFGFSVNLLTLLAMV LAIGLVVDDAIVVVENVHRHIEEGKSPVAAALIGAREVAGPVIAMTITLAAVYTPIGL MGGLTGALFREFALTLAGAVIVSGVVALTLSPVMSSLLLQAHQNEGRMGRAAEWFFGG LTRRYGQVLEFSLGHRWLTGGLALLVCISLPLLYSMPKRELAPTEDQAAVLTAIKAPQ HANLDYVELFARKLDQVYTSIPETVSTWIINGTDGPAASFGGINLAAWEKRERDASAI QSELQGKVGDVEGSSIFAFQLAALPGSTGGLPVQMVLRSPQDYPVLYRTMEEIKQKAR QSGLFVVVDSDLDYNNPVVQVRIDRAKANSLGIRMQDIGESLAVLVGENYVNRFGMEG RSYDVIPQSLRDQRFTPQALARQFVRTQDGNLVPLSTVVRVALQVEPNKLIQFDQQNA ATLQAIPAPGVSMGQAVAFLDDVARGLPAGFSHDWQSDSRQYTQEGNTLVFAFLAALV VIYLVLAAQYESLADPLIILITVPLSICGALLPLALGYATMNIYTQIGLVTLIGLISK HGILMVEFANELQLHERLDRRAAILRAAQIRLRPVLMTTAAMVFGLVPLLFASGAGAA SRFGLGVVIVSGMLVGTLFTLFVLPTVYTLLARNHAEVDKSPRSRQLAEADLLVNKA" misc_feature 4707544..4710549 /gene="mexI" /locus_tag="PA4207" /note="multidrug efflux RND transporter permease subunit; Region: RND_permease_2; NF033617" /db_xref="CDD:411236" gene 4710621..4712084 /gene="opmD" /locus_tag="PA4208" /db_xref="GeneID:880347" CDS 4710621..4712084 /gene="opmD" /locus_tag="PA4208" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252897.1" /db_xref="GeneID:880347" /translation="MKRSYPNLSRLALALAVGTGLAACSVGPDYQRPQSPPPRVASEH LGEFSGERREAPWWSFFDDPQLVRLVDQALARNHDIREARANLRSARALFDDRWLDQL PQVTSQAGYSRSIEQQLDYDGEPRRRLAESYRAGFDAQWEIDLFGRLGRLSDAALARA EAADADLRLVRLSIAADTARAYFEIQGYQRRLDVARAQVRSWRDTLELTRSSLQLGSG LPEDVENAQANLLRSEAAIPPLTTALESARYRLDVLRGEAPGSGAPILDGGAAAPLAK NLPLGDVDRLILQRPDVVSAERQLAASTEDVGAATAELYPRLDLGGFIGFFALRSGDL GSASRAFELAPSVSWPAFRLGNVRARLRAVEAQSDAALARYQRSLLLAQEDVGNALNQ LAEHQRRLVALFQSATHGANALEIANERYRAGAGSYLAVLENQRALYQIREELAQAET ASFVNVIALYKALGWGSGDLAPGAGQLAAGETAGANR" misc_feature 4710663..4712018 /gene="opmD" /locus_tag="PA4208" /note="efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; Region: outer_NodT; TIGR01845" /db_xref="CDD:273830" gene complement(4712095..4713099) /gene="phzM" /locus_tag="PA4209" /db_xref="GeneID:880514" CDS complement(4712095..4713099) /gene="phzM" /locus_tag="PA4209" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phenazine-specific methyltransferase" /protein_id="NP_252898.1" /db_xref="GeneID:880514" /translation="MNNSNLAAARNLIQVVTGEWKSRCVYVATRLGLADLIESGIDSD ETLAAAVGSDAERIHRLMRLLVAFEIFQGDTRDGYANTPTSHLLRDVEGSFRDMVLFY GEEFHAAWTPACEALLSGTPGFELAFGEDFYSYLKRCPDAGRRFLLAMKASNLAFHEI PRLLDFRGRSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGER VSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS ASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAARA " misc_feature complement(4712830..4713066) /gene="phzM" /locus_tag="PA4209" /note="dimerization domain; Region: dimerization2; cl06920" /db_xref="CDD:471544" misc_feature complement(4712155..4712772) /gene="phzM" /locus_tag="PA4209" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases; cl17173" /db_xref="CDD:473071" protein_bind 4713380..4713394 /experiment="DNA-array expression analysis [PMID: 18045385]" /experiment="EMSA [PMID: 18045385]" /note="Transcription factor binding site for NP_250122.; Evidence of regulation for: PA4209" /bound_moiety="RsaL" protein_bind 4713406..4713425 /experiment="Beta-gal reporter assay [PMID: 11544214]" /experiment="Site directed mutagenesis [PMID: 11544214]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA4210" /bound_moiety="LasR" protein_bind 4713451..4713465 /experiment="DNA-array expression analysis [PMID: 18045385]" /experiment="EMSA [PMID: 18045385]" /note="Transcription factor binding site for NP_250122.; Evidence of regulation for: PA4210" /bound_moiety="RsaL" gene 4713796..4714284 /gene="phzA1" /locus_tag="PA4210" /db_xref="GeneID:880515" CDS 4713796..4714284 /gene="phzA1" /locus_tag="PA4210" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phenazine biosynthesis protein" /protein_id="NP_252899.1" /db_xref="GeneID:880515" /translation="MNGQRYRETPLDIERLRRLNRATVERYMAMKGAERLQRHSLFVE DGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDWEWHNVRIFETEDPNHFWVECD GRGKALVPGYPQGYCENHYIHSFELENGRIKRNREFMNPIQKLRALGIAVPQIKRDGI PT" misc_feature 4713841..4714281 /gene="phzA1" /locus_tag="PA4210" /note="Nuclear transport factor 2 (NTF2-like) superfamily. This family includes members of the NTF2 family, Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases, and the beta subunit of Ring hydroxylating dioxygenases. This family is a classic example of...; Region: NTF2_like; cl09109" /db_xref="CDD:471850" gene 4714314..4714802 /gene="phzB1" /locus_tag="PA4211" /db_xref="GeneID:880518" CDS 4714314..4714802 /gene="phzB1" /locus_tag="PA4211" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phenazine biosynthesis protein" /protein_id="NP_252900.1" /db_xref="GeneID:880518" /translation="MPDTTNPIGFTDANELREKNRATVEKYMNTKGQDRLRRHELFVE DGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNINIFGTDDPNHFWVECD GHGKILFPGYPEGYYENHFLHSFELEDGKIKRNREFMNVFQQLRALSIPVPQIKREGI PT" misc_feature 4714320..4714799 /gene="phzB1" /locus_tag="PA4211" /note="Phenazine biosynthesis protein A/B; Region: PHZA_PHZB; pfam03284" /db_xref="CDD:397400" gene 4714826..4716043 /gene="phzC1" /locus_tag="PA4212" /db_xref="GeneID:880519" CDS 4714826..4716043 /gene="phzC1" /locus_tag="PA4212" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phenazine biosynthesis protein PhzC" /protein_id="NP_252901.1" /db_xref="GeneID:880519" /translation="MDDLLQRVRRCEALQQPEWGDPSRLRDVQAYLRGSPALIRAGDI LALRATLARVARGEALVVQCGDCAEDMDDHHAENVARKAAVLELLAGALRLAGRRPVI RVGRIAGQYAKPRSKPHEQVGEQTLPVYRGDMVNGREAHAEQRRADPQRILKGYAAAR NIMRHLGWDAASGQEANASPVWTSHEMLLLDYELSMLREDEQRRVYLGSTHWPWIGER TRQVDGAHVALLAEVLNPVACKVGPEIGRDQLLALCERLDPRREPGRLTLIARMGAQK VGERLPPLVEAVRAAGHPVIWLSDPMHGNTIVAPCGNKTRLVRSIAEEVAAFRLAVSG SGGVAAGLHLETTPDDVTECVADSSGLHQVSRHYTSLCDPRLNPWQALSAVMAWSGAE AIPSATFPLETVA" misc_feature 4714862..4715971 /gene="phzC1" /locus_tag="PA4212" /note="Class-II DAHP synthetase family; Region: DAHP_synth_2; cl03230" /db_xref="CDD:470763" gene 4716040..4716663 /gene="phzD1" /locus_tag="PA4213" /db_xref="GeneID:880504" CDS 4716040..4716663 /gene="phzD1" /locus_tag="PA4213" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phenazine biosynthesis protein PhzD" /protein_id="NP_252902.1" /db_xref="GeneID:880504" /translation="MSGIPEITAYPLPTAQQLPANLARWSLEPRRAVLLVHDMQRYFL RPLPESLRAGLVANAARLRRWCVEQGVQIAYTAQPGSMTEEQRGLLKDFWGPGMRASP ADREVVEELAPGPDDWLLTKWRYSAFFHSDLLQRMRAAGRDQLVLCGVYAHVGVLIST VDAYSNDIQPFLVADAIADFSEAHHRMALEYAASRCAMVVTTDEVLE" misc_feature 4716046..4716648 /gene="phzD1" /locus_tag="PA4213" /note="Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of a vinyl ether, an uncommon reaction in biological...; Region: isochorismatase; cd01013" /db_xref="CDD:238495" misc_feature order(4716049..4716051,4716166..4716168,4716319..4716321, 4716412..4716414,4716490..4716492,4716499..4716501, 4716577..4716579) /gene="phzD1" /locus_tag="PA4213" /note="hydrophobic substrate binding pocket [active]" /db_xref="CDD:238495" misc_feature order(4716151..4716153,4716271..4716273,4716298..4716300, 4716403..4716405,4716490..4716492,4716502..4716504) /gene="phzD1" /locus_tag="PA4213" /note="active site" /db_xref="CDD:238495" misc_feature 4716487..4716492 /gene="phzD1" /locus_tag="PA4213" /note="conserved cis-peptide bond [active]" /db_xref="CDD:238495" gene 4716660..4718543 /gene="phzE1" /locus_tag="PA4214" /db_xref="GeneID:880505" CDS 4716660..4718543 /gene="phzE1" /locus_tag="PA4214" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phenazine biosynthesis protein PhzE" /protein_id="NP_252903.1" /db_xref="GeneID:880505" /translation="MNALPTSLLQRLLERPAPFALLYRPESNGPGLLDVIRGEALELH GLADLPLDEPGPGLPRHDLLALIPYRQIAERGFEALDDGTPLLALKVLEQELLPLEQA LALLPNQALELSEEGFDLDDEAYAEVVGRVIADEIGRGEGANFVIKRRFQARIDGYAT ASALSFFRQLLLREKGAYWTFIVHTGERTLVGASPERHISVRDGLAVMNPISGTYRYP PAGPNLAEVMEFLDNRKEADELYMVVDEELKMMARICEDGGRVLGPYLKEMAHLAHTE YFIEGQTSRDVREVLRETLFAPTVTGSPLESACRVIRRYEPQGRGYYSGVAALIGGDG QGGRTLDSAILIRTAEIEGDGRLRIGVGSTIVRHSDPLGEAAESRAKASGLIAALKSQ APQRLGSHPHVVAALASRNAPIADFWLRGASERQQLQADLSGREVLIVDAEDTFTSMI AKQLKSLGLTVTVRGFQEPYSFDGYDLVIMGPGPGNPTEIGQPKIGHLHLAIRSLLSE RRPFLAVCLSHQVLSLCLGLDLQRRQEPNQGVQKQIDLFGAAERVGFYNTFAARALQD RIEIPEVGPIEISRDRETGEVHALRGPRFASMQFHPESVLTREGPRIIADLLRHALVE RRP" misc_feature 4717026..4717802 /gene="phzE1" /locus_tag="PA4214" /note="chorismate binding enzyme; Region: Chorismate_bind; pfam00425" /db_xref="CDD:425674" misc_feature 4717968..4718513 /gene="phzE1" /locus_tag="PA4214" /note="Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase; Region: GATase1_Anthranilate_Synthase; cd01743" /db_xref="CDD:153214" misc_feature order(4718103..4718108,4718112..4718114,4718205..4718210, 4718217..4718219,4718325..4718336) /gene="phzE1" /locus_tag="PA4214" /note="glutamine binding [chemical binding]; other site" /db_xref="CDD:153214" misc_feature order(4718205..4718207,4718460..4718462,4718466..4718468) /gene="phzE1" /locus_tag="PA4214" /note="catalytic triad [active]" /db_xref="CDD:153214" gene 4718557..4719393 /gene="phzF1" /locus_tag="PA4215" /db_xref="GeneID:880481" CDS 4718557..4719393 /gene="phzF1" /locus_tag="PA4215" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="trans-2,3-dihydro-3-hydroxyanthranilate isomerase" /protein_id="NP_252904.1" /db_xref="GeneID:880481" /translation="MHRYVVIDAFASEPLQGNPVAVFFDCDDLSGERMQRMAREMNLS ESTFVLRPQQDGDARIRIFTPVNELPFAGHPLLGTAIALGAETDKDRLFLETRMGTVP FALERQDGKVVACSMQQPIPTWEHFSRPAELLAALGLKGSTFPIEVYRNGPRHVFVGL ESVAALSALHPDHRALCDFPDLAVNCFAGAGRHWRSRMFSPAYGVVEDAATGSAAGPL AIHLARHRQIPYGQQIEILQGVEIGRPSRMYARAEGAGERVSAVEVSGNGAAFAEGRA YL" misc_feature 4718575..4719378 /gene="phzF1" /locus_tag="PA4215" /note="Phenazine biosynthesis-like protein; Region: PhzC-PhzF; pfam02567" /db_xref="CDD:396907" gene 4719419..4720063 /gene="phzG1" /locus_tag="PA4216" /db_xref="GeneID:881835" CDS 4719419..4720063 /gene="phzG1" /locus_tag="PA4216" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyridoxamine 5'-phosphate oxidase" /protein_id="NP_252906.1" /db_xref="GeneID:881835" /translation="MGVNANISESLTGTIEAPFPEFEAPPANPMEVLRNWLERARRYG VREPRALALATVDGQGRPSTRIVVIAELGERGVVFATHADSQKGRELAQNPWASGVLY WRESSQQIILNGRAERLPDERADAQWLSRPYQTHPMSIASRQSETLADIHALRAEARR LAETDGPLPRPPGYCLFELCLESVEFWGNGTERLHERLRYDRDEGGWKHRYLQP" misc_feature 4719446..4720060 /gene="phzG1" /locus_tag="PA4216" /note="phenazine biosynthesis FMN-dependent oxidase PhzG; Region: phena_PhzG; NF038138" /db_xref="CDD:468380" gene 4720301..4721509 /gene="phzS" /locus_tag="PA4217" /db_xref="GeneID:881836" CDS 4720301..4721509 /gene="phzS" /locus_tag="PA4217" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252907.1" /db_xref="GeneID:881836" /translation="MSEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLG VGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSGATVWSEPRGVEAGNAYPQY SIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGHGKPQALGADV LVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFLDGKTMIVANDEHWSRLVA YPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDI RDLLTRNQLILQYPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELA AALARNADVAAALREYEEARRPTANKIILANREREKEEWAAASRPKTEKSAALEAITG SYRNQVERPR" misc_feature 4720316..4721506 /gene="phzS" /locus_tag="PA4217" /note="hypothetical protein; Provisional; Region: PRK07538" /db_xref="CDD:236046" gene complement(4721614..4722858) /locus_tag="PA4218" /db_xref="GeneID:880532" CDS complement(4721614..4722858) /locus_tag="PA4218" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_252908.1" /db_xref="GeneID:880532" /translation="MLELYRHRRLVITLALLYLSQGIPIGLAMDALPTLLRQDGAPLQ ALAFLPLVGLPWVVKFLWAPWVDNHWSRRLGRRRSWILPMQCMVLACLLGLATLGLGV ASAGWAVGLLALASLASATQDIATDGMAAEHFSGELLAKVNAVQIAGVMIGFFGGGAG SLILAGHFGQRTAFLVMACVPLASLCCVLALGRGDPHELPPAPAAKASLLRFLRRPLA PSLLALALLSAMTAVSGFGLSKLYLSDAGWALQDIGRLGMSGGLVTVFLGCGGGAWLV RRIGLWRGFALGVVLAGCSALLWYLQAGRWLALSEGLAWTCVLIGSLATGITSVAILT AAMRFAGQGGQAGTDVTAVQSTRDLGEMLASSFLVSLTAQIGYAGGFLTGSALAVLAL LLALRLQAGEGRGEWKGRAEEA" misc_feature complement(4721704..4722834) /locus_tag="PA4218" /note="siderophore transporter, RhtX/FptX family; Region: sider_RhtX_FptX; TIGR02718" /db_xref="CDD:131765" misc_feature complement(order(4721776..4721778,4721785..4721790, 4721797..4721802,4721809..4721811,4721860..4721862, 4721872..4721874,4721884..4721889,4722052..4722054, 4722064..4722066,4722148..4722150,4722157..4722165, 4722172..4722177,4722184..4722186,4722409..4722411, 4722418..4722423,4722430..4722432,4722478..4722480, 4722487..4722495,4722499..4722504,4722682..4722684, 4722772..4722774,4722781..4722786,4722793..4722798)) /locus_tag="PA4218" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341038" gene complement(4722851..4724356) /locus_tag="PA4219" /db_xref="GeneID:880533" CDS complement(4722851..4724356) /locus_tag="PA4219" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252909.2" /db_xref="GeneID:880533" /translation="MAARPLLLSLHGGAGALFGVLLFVVLFSGAWSLGHDDLREWLRA PAQAGGEALALERLLERAGEEGVDIRDATLLLPAPGHAAFSVCDARLDCRLDLDPASG RVLPPMPALDLLLNLHKSLFVGFPGRVLVSLFGVSLLLLCLAGVLLHSRRWRDLRRWR RDRGLRLALFDLHGLIGIWGLPWLLLFGFTGALSGLGALGTLLLAPVAYPQEPNRVFV ELMGPPPPAAEGRPLASRIDLDRLLAGDAVRAPGFVAQRLSLSHAGDVAGSVEIAGIR RGLPSTANFERHRYRLADGTLLGERSSAQRGFWLRAFIAVQPLHFAQYQWLGPGWSAA LRGLHLAMGLGACLLCASGLYLWLQRRASAPDARVRLLQRLSQGFCAGLVAAAALLLL GLQLAPSELLAGPWPGRLFLVLWAAAGLAALLLPGDWPLARGLLGVAGLACLAAAVAH LAPWLMRGRLPALGPDLTLILCGALLIRHAWMQARAAAPPAHPRVTGDHHA" misc_feature complement(4723232..4724356) /locus_tag="PA4219" /note="PepSY-associated TM region [Function unknown]; Region: PiuB; COG3182" /db_xref="CDD:442415" gene complement(4724358..4724639) /locus_tag="PA4220" /db_xref="GeneID:880418" CDS complement(4724358..4724639) /locus_tag="PA4220" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252910.1" /db_xref="GeneID:880418" /translation="MPRQSGFGWAWRVPLALAGSLAAATASGYLLTRGLPLDDPLERL YAGLFGALGVGLLLLVGGLLARGPGNFAWRLGGSLLVLGLALWLLAGRG" gene complement(4724639..4726801) /gene="fptA" /locus_tag="PA4221" /db_xref="GeneID:880419" CDS complement(4724639..4726801) /gene="fptA" /locus_tag="PA4221" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="Fe(III)-pyochelin outer membrane receptor" /protein_id="NP_252911.1" /db_xref="GeneID:880419" /translation="MKTETKVIKGRQGIARNRHTPLCLGLLLALSPLAAAVADARKDG ETELPDMVISGESTSATQPPGVTTLGKVPLKPRELPQSASVIDHERLEQQNLFSLDEA MQQATGVTVQPFQLLTTAYYVRGFKVDSFELDGVPALLGNTASSPQDMAIYERVEILR GSNGLLHGTGNPAATVNLVRKRPQREFAASTTLSAGRWDRYRAEVDVGGPLSASGNVR GRAVAAYEDRDYFYDVADQGTRLLYGVTEFDLSPDTLLTVGAQYQHIDSITNMAGVPM AKDGSNLGLSRDTYLDVDWDRFKWDTYRAFGSLEQQLGGGWKGKVSAEYQEADSRLRY AGSFGAIDPQTGDGGQLMGAAYKFKSIQRSLDANLNGPVRLFGLTHELLGGVTYAQGE TRQDTARFLNLPNTPVNVYRWDPHGVPRPQIGQYTSPGTTTTTQKGLYALGRIKLAEP LTLVVGGRESWWDQDTPATRFKPGRQFTPYGGLIWDFARDWSWYVSYAEVYQPQADRQ TWNSEPLSPVEGKTYETGIKGELADGRLNLSLAAFRIDLENNPQEDPDHPGPPNNPFY ISGGKVRSQGFELEGTGYLTPYWSLSAGYTYTSTEYLKDSQNDSGTRYSTFTPRHLLR LWSNYDLPWQDRRWSVGGGLQAQSDYSVDYRGVSMRQGGYALVNMRLGYKIDEHWTAA VNVNNLFDRTYYQSLSNPNWNNRYGEPRSFNVSLRGAF" misc_feature complement(4724642..4726684) /gene="fptA" /locus_tag="PA4221" /note="Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]; Region: FhuE; COG4773" /db_xref="CDD:443805" gene complement(4726893..4728617) /locus_tag="PA4222" /db_xref="GeneID:880073" CDS complement(4726893..4728617) /locus_tag="PA4222" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_252912.1" /db_xref="GeneID:880073" /translation="MTLFERMRALPEDCRAALRRASAWAVLAALLDAACGVLLVPLVE AWFAEGALPWRWVAALLGLSLAQALLQYLALRRGFAAGGSLAAGLVRSLVARLPRLAP PALRRVAPAEGLLRGPVMQAMGIPAHLLGPLIAALVTPLGVILGLFLIDPSIALGLLL AGAFLAALLRWSGRRNLAAEDARLAAERDAARQLQAFAERQPLLRAAQRESVARQGLE EALRSLHRSTLDLLRRSLPSGLGFALAVQAAFAFALLGGAWAVERQWLDGARLVAVLV LLVRFIEPLAQLTHLDQALRGAWQALDTLLRVFALAPLRSPEPGERPHDASLAAEAVE LRLEDGRALLEDISLRLEPGSLNVLVGPSGAGKSSLLALLGRLYDVDAGRVLLGGVDI RRLSETTLAASRNLVFQDNGLFRGSVAWNLRMARADADLEALREAARAVGLLEEIEAW PQGWDSDVGPGGALLSGGQRQRLCLARGLLSTAPLLLLDEPTASLDAASEAQVLRSLL GLRGRRTLLVVTHRPALARQADQVLLLEEGRLRLSGLHADLLVRDDWYAGFVGLAGEE SSATVVDR" misc_feature complement(4726947..4728509) /locus_tag="PA4222" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:440747" gene complement(4728614..4730326) /locus_tag="PA4223" /db_xref="GeneID:880074" CDS complement(4728614..4730326) /locus_tag="PA4223" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_252913.1" /db_xref="GeneID:880074" /translation="MTPVLWRLLRTYRWRLAAAMGLQALAGLCSLLPWMLLAWLAEPL ARGQAQPALLALVLLAVLAWLGCQALAAHLAHRVDADLCNDLRLRLLAHLQRLPLDWF GRQGPDGVARLVEQDVRALHQLIAHAPNDLSNLLVVPLVALLWLAWLHPWLLLFCLLP LVLAAAGFLLLRSARYRDLVLRRNAALERLSADYGEFAHNLLLARQYPGAGIQQGAEA SAAAFGEAFGAWVKRVGHLAALVYVQLSTPWLLAWVLLGALALDALGVPLALGQACAF LLLLRALAAPVQALGHGGDALLGARAAAERLQQVFDQAPLAEGRSTREPVDGAVALHG LGHAYEGVEVLADIDLELEDGSLVALVGPSGSGKSTLLHLLARYMDAQRGELEVGGLA LKDMPDAVRHRHIALVGQQAAALEISLADNIALFRPDADLQEIRQAARDACLDERIMA LPRGYDSVPGRDLQLSGGELQRLALARALLSPASLLLLDEPTSALDPQTARQVLRNLR ERGGGRTRVIVAHRLAEVSDADLILVLVAGRLVERGEHAALLAADGAYARLWREQNGA EVAA" misc_feature complement(4728626..4730314) /locus_tag="PA4223" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:440747" protein_bind 4729256..4729268 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4222" /bound_moiety="AmrZ" protein_bind 4729277..4729289 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4222" /bound_moiety="AmrZ" gene complement(4730323..4731372) /gene="pchG" /locus_tag="PA4224" /db_xref="GeneID:880082" CDS complement(4730323..4731372) /gene="pchG" /locus_tag="PA4224" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyochelin biosynthetic protein PchG" /protein_id="NP_252914.1" /db_xref="GeneID:880082" /translation="MSDVRSVVVAGSRFGQFYAAGVAADPRFVLRGILGQGSRRSRAL AERLGVETWCEVEALPDDVRLACVAVGGAARGEQGPALAEALMARGIDVLIEHPLLPR EWQDLLRSAERLGRRCLLNTFYPQLPAVARFIELGRQLHRRRGIRHLDAACGVQVGFA TLDILAALLEGVGPWSLESPSNDLSAMRGLSLVLAEVPLSLLVLNELAAADDGRMTLL QRVSLTTDRGTLSLLSPHGPLLWTPAVAVPAEDDDGLFALFDEIAGEPLPSAQLWYAE PCSWAQVHQRLWPAAAAEALALLADGDEVRRRNQRSLEVAALWQRIGERLGFPEAPPA SLAPASLEQVLEQAS" misc_feature complement(4730377..4731369) /gene="pchG" /locus_tag="PA4224" /note="Oxidoreductase (NAD-binding), involved in siderophore biosynthesis [Inorganic ion transport and metabolism]; Region: PchG; cl28196" /db_xref="CDD:475003" gene complement(4731369..4736798) /gene="pchF" /locus_tag="PA4225" /db_xref="GeneID:880083" CDS complement(4731369..4736798) /gene="pchF" /locus_tag="PA4225" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyochelin synthetase" /protein_id="NP_252915.1" /db_xref="GeneID:880083" /translation="MSLGELLETCRSRRIELWSEAGRLRYRAPQGALDAGLAERLRAE REALLEHLEGGPGWRAEPDMAHQRFPLTPVQAAYVLGRQAAFDYGGNACQLYAEYDWP ADTDPARLEAAWNAMVERHPMLRAVIEDNAWQRVLPEVPWQRLTVHACAGLDEAAFQA HLERVRERLDHACAALDQWPVLRPELSIGRDACVLHCSVDFTLVDYASLQLLLGEWRR RYLDPQWTAEPLEATFRDYVGVEQRRRQSPAWQRDRDWWLARLDALPGRPDLPLRVQP DTRSTRFRHFHARLDEAAWQALGARAGEHGLSAAGVALAAFAETIGRWSQAPAFCLNL TVLNRPPLHPQLAQVLGDFTALSLLAVDSRHGDSFVERARRIGEQMFDDLDHPTFSGV DLLRELARRRGRGADLMPVVFTSGIGSVQRLLGDGEAPRAPRYMISQTPQVWLDCQVT DQFGGLEIGWDVRLGLFPEGQAEAMFDDFVGLLRRLAQSPRAWTDGDATEPVEAPPQA LPGSARSIAAGFAERALLTPDATAIHDAAGSYSYRQVAQHASALRRVLEAHGAGRGRR VAVMLPKSAAQLVAVIGILQAGAAYVPVDIRQPPLRRQAILASAEVVALVCLESDVPD VGCACVAIDRLAADSAWPPPPAAEVAADDLAYVIYTSGSTGTPKGVMLSHAAVSNTLL DINQRYGVDANDRVLGLAELSFDLSVYDFFGATAAGAQVVLPDPARGSDPSHWAELLE RHAITLWNSVPAQGQMLIDYLESEPQRHLPGPRCVLWSGDWIPVSLPTRWWRRWPDSA LFSLGGATEAAIWSIEQPIRPQHTELASIPYGRALRGQSVEVLDARGRRCPPGVRGEI HIGGVGLALGYAGDPQRTAERFVRHPDGRRLYRTGDLGRYLADGSIEFLGREDDQVKI RGHRIELAELDAALCAHPQVNLAATVVLGETHERSLASFVTLHAPVEAGEDPRTALDA VRQRAAQALRRDWGSEEGIAAAVAALDRACLASLAAWLAGSGLFASATPLDLATLCQR LGIAEARQRLLRHWLRQLEEGGYLRAEGEGWLGCAERPAQSPEDAWTAFAGCAPAALW PAELVAYLRDSAQSLGEQLAGRISPAALMFPQGSARIAEAMYSQGLHAQALHEAMAEA IAAIVERQPQRRWRLLELGAGTAAASRTVIARLAPLVQRGAEVDYLFTDVSSYFLAAA RERFADQPWVRFGRFDMNGDLLDQGVAPHSVDILLSSGALNNALDTPALLAGLRELLS ADAWLVIQELTREHNEISVSQSLMMENPRDLRDERRQLFVHTGQWLEWLAAQGGDLAC GVVPPGSALDLLGYDVLLARCKTDRARLEPAELLAFVEARVPRYMLPAQLRVLERLPV TGNGKIDRKALTGFARQPQADLRHGVAQAPADELENALLALWREVLDNPSLGVEQDFF GAGGDSLLIAQLIARLRERLESARRHPFDRLLRWALSQPTPRGLAERLRSAPEEGRGP ALAAARGVAPAPAGMSRAPLAEGAVALDPLVRLVPGEGVPRVLVHEGLGTLLPYRPLL RALGEGRPLLGLAVHDSDAYLAIPAEHLNACLGRRYAEALHRAGLREVDLLGYCSGGL VALETAKSLVQRGVRVRQLDIVSSYRIPYRVDDERLLLFSFAATLGLDTAALGFPAPE RLGQAVQAALAQTPERLVAEALAGLPGLADLVALRGRVLQAASGSADAVSVERDTLYR LFCHSVRASQAEAPEPYVGALRLFVPDAGNPLVPRYAEALETQWRAAALGACGIHEVP GGHFDCLGEALAQSLSKPMPEEASR" misc_feature complement(4736640..4736786) /gene="pchF" /locus_tag="PA4225" /note="TubC N-terminal docking domain; Region: TubC_N; pfam18563" /db_xref="CDD:436580" misc_feature complement(4732719..4736624) /gene="pchF" /locus_tag="PA4225" /note="seryl-AMP synthase component of non-ribosomal peptide synthetase [Secondary metabolites biosynthesis, transport and catabolism]; Region: EntF; COG1020" /db_xref="CDD:440643" misc_feature complement(4733769..4735217) /gene="pchF" /locus_tag="PA4225" /note="The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes; Region: A_NRPS_TlmIV_like; cd12114" /db_xref="CDD:341279" misc_feature complement(order(4734795..4734800,4734804..4734821, 4734828..4734830)) /gene="pchF" /locus_tag="PA4225" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341279" misc_feature complement(order(4733787..4733789,4734078..4734080, 4734087..4734089,4734123..4734125,4734312..4734314, 4734381..4734398,4734459..4734464,4734816..4734821)) /gene="pchF" /locus_tag="PA4225" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341279" misc_feature complement(4731558..>4732748) /gene="pchF" /locus_tag="PA4225" /note="peptide synthase; Provisional; Region: PRK12467" /db_xref="CDD:237108" gene complement(4736795..4741111) /gene="pchE" /locus_tag="PA4226" /db_xref="GeneID:880048" CDS complement(4736795..4741111) /gene="pchE" /locus_tag="PA4226" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="dihydroaeruginoic acid synthetase" /protein_id="NP_252916.1" /db_xref="GeneID:880048" /translation="MDLPPDSRTALRDWLTEQLADLLGEPLADVRALADDDDLLGCGL DSIRLMYLQERLRARGSTLDFAQLAQRPCLGAWLDLLACADRLSAPATVALPTAQDRD QPFELSSVQQAYWLGRGAGEVLGNVSCHAFLEFRTRDVDPQRLAAAAECVRQRHPMLR ARFLDGRQQILPTPPLSCFDLQDWRTLQVDEAERDWQALRDWRAHECLAVERGQVFLL GLVRMPGGEDRLWLSLDLLAADVESLRLLLAELGVAYLAPERLAEPPALHFADYLAHR AAQRAEAAARARDYWLERLPRLPDAPALPLACAPESIRQPRTRRLAFQLSAGESRRLE RLAAQHGVTLSSVFGCAFALVLARWSESAEFLLNVPLFDRHADDPRIGEVIADFTTLL LLECRMQAGVSFAEAVKSFQRNLHGAIDHAAFPALEVLREARRQGQPRSAPVVFASNL GEEGFVPAAFRDAFGDLHDMLSQTPQVWLDHQLYRVGDGILLAWDSVVGLFPEGLPET MFEAYVGLLQRLCDSAWGQPADLPLPWAQQARRALLNGQPACATARTLHRDFFLRAAE APDADALLYRDQRVTRGELAERALRIAGGLREAGVRPGDAVEVSLPRGPQQVAAVFGV LAAGACYVPLDIDQPPARRRLIEEAAGVCLAITEEDDPQALPPRLDVQRLLRGPALAA PVPLAPQASAYVIYTSGSTGVPKGVEVSHAAAINTIDALLDLLRVNASDRLLAVSALD FDLSVFDLFGGLGAGASLVLPAQEQARDAAAWAEAIQRHAVSLWNSAPALLEMALSLP ASQADYRSLRAVLLSGDWVALDLPGRLRPRCAEGCRLHVLGGATEAGIWSNLQSVDTV PPHWRSIPYGRPLPGQAYRVVDTHGRDVPDLVVGELWIGGASLARGYRNDPELSARRF VHDAQGRWYRTGDRGRYWGDGTLEFLGRVDQQVKVRGQRIELGEVEAALCAQAGVESA CAAVLGGGVASLGAVLVPRLAPRAEGSMDLPAAQPFAGLAEAEAVLTREILGALLEAP LELDDGLRRRWLDWLADSAASALPSLDEALRRLGWQAAGLTAMGNALRGLLAGEQAPA ALLLDPWLAPQAVAARLPDGREALARLLEALPTPAAGERLRVAVLDTRAGLWLDQGMA SLLRPGLELTLFERSRVLLDAAATRLPERIVVQALDDGLLPAEHLGRYDRVISFAALH AYEASREGLALAAALLRPQGRLLLVDLLCESPLALLGAALLDDRPLRLAELPSLLADL AAAGLAPRCLWRSERIALVEALAPGLGLDAAALQAGLEQRLPQAMRPERLWCLPSLPL NGNGKVDRRRLAESMTRALGECRHEPSAEEPLEAHEQALAECWEAVLKRPVRRREASF FSLGGDSLLATRLLAGIRERFGVRLGMADFYRQPTLAGLARHLQVQTVEIEETQLEEG VL" misc_feature complement(4740854..>4741102) /gene="pchE" /locus_tag="PA4226" /note="Acyl carrier protein/domain [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]; Region: AcpA; COG3433" /db_xref="CDD:442659" misc_feature complement(4736924..4740862) /gene="pchE" /locus_tag="PA4226" /note="seryl-AMP synthase component of non-ribosomal peptide synthetase [Secondary metabolites biosynthesis, transport and catabolism]; Region: EntF; COG1020" /db_xref="CDD:440643" gene complement(4741305..4742195) /gene="pchR" /locus_tag="PA4227" /db_xref="GeneID:880049" CDS complement(4741305..4742195) /gene="pchR" /locus_tag="PA4227" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator PchR" /protein_id="NP_252917.1" /db_xref="GeneID:880049" /translation="MTITIIAPPQADAAAPAPGNRPGVAHIDPNMKLVTGTFCSASED WFEEPLERGLRLILVQSGQLRCRIPGQPEHLIEGPSLCTIANDGDFTSAQIYGTDKPL RYTIVQLGVEALDSRLGWLPEQLIRRPGGDPRIMSCPAPRAMQALASQIATCQMLGPT RDLYLGGKALELAALSAQFLSGEGRPVEEPRITCSEVERIHAARDLLVGALQEPPSLD TLASRVGMNPRKLTAGFRKVFGASVFGYLQEYRLREAHRMLCDEEANVSTVAYRVGYS PAHFSIAFRKRYGISPSEIR" misc_feature complement(4741308..>4741892) /gene="pchR" /locus_tag="PA4227" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" misc_feature complement(4741308..4741556) /gene="pchR" /locus_tag="PA4227" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" protein_bind 4742303..4742334 /experiment="Beta-gal reporter assay [PMID: 16194235]" /experiment="EMSA [PMID: 16194235]" /experiment="Site directed mutagenesis [PMID: 16194235]" /note="'Transcription factor binding site for NP_252917.; Evidence of regulation for: PA4228, PA4227'" /bound_moiety="PchR" gene 4742424..4744067 /gene="pchD" /locus_tag="PA4228" /db_xref="GeneID:880566" CDS 4742424..4744067 /gene="pchD" /locus_tag="PA4228" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="2,3-dihydroxybenzoate-AMP ligase" /protein_id="NP_252918.1" /db_xref="GeneID:880566" /translation="MTSSPVTPSAVDDAPDWPAAFVRRYLDAGHWQDQSFAEALATSA ARHPRRIALCDDDQRLSYADLLQRCRRLAAGLRQAGLAHGDTVVLHLPNGIAFVETCF ALFQLGVRPVLALPAHRQHEISGFCRFAEAKAYIGAERIDGFDPRPMARELLASGACR MALIHGEAEAPLQALAPLYQADALEDCAARAEDIACFQLSGGTTGTPKLIPRRHREYL YNVRASAEVCGFDEHTVYLTGLPMAHNFTLCCPGVIGTLLASGRVVVSQRADPEHCFA LIARERVTHTALVPPLAMLWLDAQESRRADLSSLRLLQVGGSRLGSSAAQRVEPVLGC QLQQVLGMAEGLICYTRLDDPPERVLHTQGRPLSPDDEVRVVDAEGREVGPGEVGELT VRGPYTIRGYYRLPEHNAKAFSADGFYRTGDRVSRDKDGYLVVEGRDKDQINRGGEKI AAEEVENLLIAHPQVHDATVVAMPDSLLGERTCAFVIPRQPAPSALKLKQYLHACGLA AFKVPDRIELVPAFPQTGIGKISKKDLRERLRRELEARA" misc_feature 4742457..4744025 /gene="pchD" /locus_tag="PA4228" /note="2,3-dihydroxybenzoate-AMP synthase component of non-ribosomal peptide synthetase [Secondary metabolites biosynthesis, transport and catabolism]; Region: EntE; COG1021" /db_xref="CDD:440644" protein_bind complement(4742530..4742547) /experiment="EMSA [PMID: 22505688]" /note="Transcription factor binding site for NP_251281." /bound_moiety="VqsR" gene 4744064..4744819 /gene="pchC" /locus_tag="PA4229" /db_xref="GeneID:881845" CDS 4744064..4744819 /gene="pchC" /locus_tag="PA4229" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyochelin biosynthetic protein PchC" /protein_id="NP_252919.1" /db_xref="GeneID:881845" /translation="MSAAWVRPFRLTPMPRLRLACFPHAGGSASFFRSWSERLPPDID LLALQYPGREDRFNEAPATRLEDLADGAALALRDFADAPLALFGHSLGAALAYETALR LESAGAPLRHLFVSAHPAPHRQRGGALHRGDEAALLEDVRRQGGASELLEDADLRALF LPILRADYQAIETYRRAQPIALACALDVLLGEHDEEVSAAEAQAWSDASRTPARLRRF PGGHFYLSEGRDAVIEHLLRRLAHPDALSREVA" misc_feature 4744097..4744786 /gene="pchC" /locus_tag="PA4229" /note="Surfactin synthase thioesterase subunit [Secondary metabolites biosynthesis, transport and catabolism]; Region: GrsT; COG3208" /db_xref="CDD:442441" gene 4744819..4745124 /gene="pchB" /locus_tag="PA4230" /db_xref="GeneID:881846" CDS 4744819..4745124 /gene="pchB" /locus_tag="PA4230" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="isochorismate-pyruvate lyase" /protein_id="NP_252920.1" /db_xref="GeneID:881846" /translation="MKTPEDCTGLADIREAIDRIDLDIVQALGRRMDYVKAASRFKAS EAAIPAPERVAAMLPERARWAEENGLDAPFVEGLFAQIIHWYIAEQIKYWRQTRGAA" misc_feature 4744819..4745121 /gene="pchB" /locus_tag="PA4230" /note="isochorismate lyase; Region: PRK07075" /db_xref="CDD:136191" gene 4745121..4746551 /gene="pchA" /locus_tag="PA4231" /db_xref="GeneID:881821" CDS 4745121..4746551 /gene="pchA" /locus_tag="PA4231" /EC_number="5.4.4.2" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="salicylate biosynthesis isochorismate synthase" /protein_id="NP_252921.1" /db_xref="GeneID:881821" /translation="MSRLAPLSQCLHALRGTFERAIGQAQALDRPVLVAASFEIDPLD PLQVFGAWDDRQTPCLYWEQPELAFFAWGCALELQGHGEQRFARIEENWQLLCADAVV EGPLAPRLCGGFRFDPRGPREEHWQAFADASLMLAGITVLREGERYRVLCQHLAKPGE DALALAAYHCSALLRLRQPARRRPSGPTAGAQGDASAQERRQWEAKVSDAVSSVRQGR FGKVVLARTQARPLGDIEPWQVIEHLRLQHADAQLFACRRGNACFLGASPERLVRIRA GEALTHALAGTIARGGDAQEDARLGQALLDSAKDRHEHQLVVEAIRTALEPFSEVLEI PDAPGLKRLARVQHLNTPIRARLADAGGILRLLQALHPTPAVGGYPRSAALDYIRQHE GMDRGWYAAPLGWLDGEGNGDFLVALRSALLTPGRGYLFAGCGLVGDSEPAHEYRETC LKLSAMREALSAIGGLDEVPLQRGVA" misc_feature 4745139..4746548 /gene="pchA" /locus_tag="PA4231" /note="isochorismate synthase; Region: PRK07054" /db_xref="CDD:235920" gene complement(4746640..4747137) /gene="ssb" /locus_tag="PA4232" /db_xref="GeneID:881822" CDS complement(4746640..4747137) /gene="ssb" /locus_tag="PA4232" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="single-stranded DNA-binding protein" /protein_id="NP_252922.1" /db_xref="GeneID:881822" /translation="MARGVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQ TGQQQERTEWHRVVFFGRLAEIAGEYLRKGSQVYVEGSLRTRKWQGQDGQDRYTTEIV VDINGNMQLLGGRPSGDDSQRAPREPMQRPQQAPQQQSRPAPQQQPAPQPAQDYDSFD DDIPF" misc_feature complement(4746643..4747137) /gene="ssb" /locus_tag="PA4232" /note="This superfamily includes two oligonucleotide/oligosaccharide binding fold (OBF) domain families. One of these contains the OBF domains of the large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small (RPA3, 14 kDa) subunits of human heterotrimeric...; Region: Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.; cl09930" /db_xref="CDD:471953" misc_feature complement(order(4746841..4746843,4746850..4746852, 4746883..4746885,4746910..4746912,4746973..4746975, 4746979..4746981,4747024..4747032,4747105..4747116)) /gene="ssb" /locus_tag="PA4232" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:239942" misc_feature complement(order(4746832..4746834,4746838..4746840, 4746877..4746882,4746886..4746888,4746892..4746894, 4746916..4746921,4746958..4746960,4746964..4746966, 4746970..4746972,4746976..4746978,4746982..4746987, 4747021..4747026,4747045..4747047,4747075..4747077, 4747093..4747101)) /gene="ssb" /locus_tag="PA4232" /note="ssDNA binding site [nucleotide binding]; other site" /db_xref="CDD:239942" gene complement(4747154..4748542) /locus_tag="PA4233" /db_xref="GeneID:881826" CDS complement(4747154..4748542) /locus_tag="PA4233" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_252923.1" /db_xref="GeneID:881826" /translation="MHDSHTERMSGTETRAAVGLSLVFAFRMLGMFMVLPVLATYGQD LAGATPALIGLAIGAYGLTQAILQIPFGTISDRIGRRPVIVVGLLIFAAGAALAANAD SIWGVIAGRVLQGAGAISAAVMALLSDLTREQHRTKAMAMIGMSIGVSFAVAMVLGPV LTHLFGLHGLFWFTAGMALVGLLLILFFVPQPDHMTQHRESSVARQALLPTLKHGDLL RLDAGILILHAILMASFVALPLALVHEGGLPKEQHWWVYLTALLVGFFGMVPFIIYAE KKRRMKRVLTGAVATLLACELFFLVFGHSLAMLVVGTVVFFTAFNLLEASLPSLVSKV SPAGGKGTAMGVYSTSQFLGAALGGILGGWMFQHGGLSMVFIGCAVLAALWLAIAVTM REPPYVTSIRLPLAPAALQDAVLVQRFRALPGVADAVVVAEEAAAYVKVDTQQVDRTA LERLAQAAPGGC" misc_feature complement(4747364..4748485) /locus_tag="PA4233" /note="Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily; Region: MFS_YajR_like; cd17472" /db_xref="CDD:341025" misc_feature complement(order(4747478..4747480,4747487..4747492, 4747499..4747504,4747511..4747513,4747580..4747582, 4747592..4747594,4747604..4747609,4747739..4747741, 4747751..4747753,4747835..4747837,4747844..4747852, 4747859..4747864,4747871..4747873,4748078..4748080, 4748087..4748092,4748099..4748101,4748165..4748167, 4748174..4748182,4748186..4748191,4748339..4748341, 4748438..4748440,4748447..4748452,4748459..4748464)) /locus_tag="PA4233" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341025" gene 4748756..4751593 /gene="uvrA" /locus_tag="PA4234" /db_xref="GeneID:881827" CDS 4748756..4751593 /gene="uvrA" /locus_tag="PA4234" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit A" /protein_id="NP_252924.1" /db_xref="GeneID:881827" /translation="MDKILIRGARTHNLKNVDLTLPRDKLIVITGLSGSGKSSLAFDT LYAEGQRRYVESLSAYARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTIT EIYDYLRLLYARVGTPRCPDHDIPLEAQTVSQMVDQVLALPEGSKLMLLAPVIRERKG EHLAVFDEMRAQGFVRARVDGKLYELDEVPKLDKQKKHSIDVVVDRFKVRADLQQRLA ESFETALSLADGIALVAPMDEDEDVEEIIFSARFACPVCGHSISELEPKLFSFNNPAG ACPTCDGLGVKQFFDARRVVNGELTLAEGAIRGWDRRNVYYFQMLGSLAQHYGFSLEE PFDELGAEHQKVVLYGSGRENVDFRYLNDRGDIVKRSHPFEGILPNLERRYRETESAT VREELAKFLSTQPCPDCHGTRLRREARHVWVGDRTLPAITAMPVGEACEYAAGLSLTG RRGEIAAKILKEIRDRLQFLVNVGLDYLTLDRSADTLSGGEAQRIRLASQIGAGLVGV MYILDEPSIGLHQRDNERLLGTLTHLRNLGNTVIVVEHDEDAIRLADYVVDIGPGAGV HGGQVVAEGTPDQVMNHPDSLTGKYLSGRKKIAVPAKRTPRDKKKLLKLKGARGNNLQ NVNLEIPVGLFTCITGVSGSGKSTLINNTLFPITATALNGATTLEVAPYDSFDGLQHL DKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFSGVPEARSRGYGPGRFSFNVKGGRC EACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEIRYKGKSIHEVLEMTIEEARE FFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLSRELSKRDTGKTLYIL DEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWLVDLGPEGGSKGGQ IIANGTPEQVAEMPQSHTGHFLKPLLERDRA" misc_feature 4748756..4751581 /gene="uvrA" /locus_tag="PA4234" /note="excinuclease ABC subunit UvrA; Region: uvrA; PRK00349" /db_xref="CDD:234734" gene complement(4751665..4752129) /gene="bfrA" /locus_tag="PA4235" /db_xref="GeneID:881830" CDS complement(4751665..4752129) /gene="bfrA" /locus_tag="PA4235" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="bacterioferritin" /protein_id="NP_252925.1" /db_xref="GeneID:881830" /translation="MQGHPEVIDYLNTLLTGELAARDQYFIHSRMYEDWGFSKLYERL NHEMEEETQHADALLRRILLLEGTPRMRPDDIHPGTTVPEMLEADLKLERHVRAALAK GIALCEQHKDFVSRDILKAQLADTEEDHAYWLEQQLGLIARMGLENYLQSQI" misc_feature complement(4751668..4752126) /gene="bfrA" /locus_tag="PA4235" /note="ferritin-like diiron-binding domain; Region: Bacterioferritin; cd00907" /db_xref="CDD:153099" misc_feature complement(order(4751962..4751964,4751974..4751976, 4751995..4751997,4752040..4752042,4752061..4752063, 4752085..4752087)) /gene="bfrA" /locus_tag="PA4235" /note="heme binding site [chemical binding]; other site" /db_xref="CDD:153099" misc_feature complement(order(4751749..4751754,4751830..4751832, 4751842..4751844,4751851..4751856,4751968..4751970, 4751977..4751979,4752055..4752057,4752067..4752072, 4752076..4752081)) /gene="bfrA" /locus_tag="PA4235" /note="ferroxidase pore [active]" /db_xref="CDD:153099" misc_feature complement(order(4751740..4751742,4751749..4751751, 4751830..4751832,4751851..4751853,4751968..4751970, 4751977..4751979,4752055..4752057,4752076..4752078)) /gene="bfrA" /locus_tag="PA4235" /note="ferroxidase diiron center [ion binding]; other site" /db_xref="CDD:153099" gene complement(4752260..4753708) /gene="katA" /locus_tag="PA4236" /db_xref="GeneID:881831" CDS complement(4752260..4753708) /gene="katA" /locus_tag="PA4236" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="catalase" /protein_id="NP_252926.1" /db_xref="GeneID:881831" /translation="MEEKTRLTTAAGAPVVDNQNVQTAGPRGPMLLQDVWFLEKLAHF DREVIPERRMHAKGSAAYGTFTVTHDITPYTRAKIFSQVGKKTDMFLRFSTVAGERGA ADAERDIRGFSMRFYTEQGNWDLVGNNTPVFYLRDPLKFPDLNHVVKRDPRTNLRNAT FKWDFFSHLPESLHQLTIDFSDRGLPKSYRHIHGFGSHTFSFINANNERFWVKFHFKT QQGIENLTNAEAAEVIAQDRESSQRDLYESIEKGDFPRWKMYVQIMPEKEAATYRYNP FDLTKVWPHGDYPLIEVGFFELNRNPDNYFAEVEQAAFTPANVVPGIGFSPDKMLQGR LFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGMRVDGNNAHQRVTYEPNSFNQW QEQPDFSEPPLSLEGAADHWNHRVDDDYYSQPAALFHLFTDEQKQRLFANIAEDIRDV PEQIQRRQIGLFLKVDPAYGKGVADALGLKLD" misc_feature complement(4752263..4753705) /gene="katA" /locus_tag="PA4236" /note="Catalase [Inorganic ion transport and metabolism]; Region: KatE; COG0753" /db_xref="CDD:440516" protein_bind complement(4753865..4753882) /experiment="EMSA [PMID: 16238634]" /experiment="GUS reporter gene assay [PMID: 16238634]" /note="Transcription factor binding site for NP_254047.; Evidence of regulation for: PA4236" /bound_moiety="PhoB" gene complement(4753990..4754379) /gene="rplQ" /locus_tag="PA4237" /db_xref="GeneID:881767" CDS complement(4753990..4754379) /gene="rplQ" /locus_tag="PA4237" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L17" /protein_id="NP_252927.1" /db_xref="GeneID:881767" /translation="MRHRKSGRHLSRTSAHRKAMFQNMAVSLFEHELIKTTLPKAKEL RRVAEPLITLAKEDSVANRRLAFDRTRSKAAVGKLFNDLGKRYANRPGGYLRILKCGF RAGDNAPMAYVELVDRPVGGEVVEAAE" misc_feature complement(4754020..4754379) /gene="rplQ" /locus_tag="PA4237" /note="Ribosomal protein L17 [Translation, ribosomal structure and biogenesis]; Region: RplQ; COG0203" /db_xref="CDD:439973" gene complement(4754423..4755424) /gene="rpoA" /locus_tag="PA4238" /db_xref="GeneID:881813" CDS complement(4754423..4755424) /gene="rpoA" /locus_tag="PA4238" /EC_number="2.7.7.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit alpha" /protein_id="NP_252928.1" /db_xref="GeneID:881813" /translation="MQSSVNEFLTPRHIDVQVVSQTRAKITLEPLERGFGHTLGNALR RILLSSMPGCAVVEAEIDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTL AKKGSGVVTAADIQLDHDVEIINGDHVIANLADNGALNMKLKVARGRGYEPADARQSD EDESRSIGRLQLDASFSPVRRVSYVVENARVEQRTNLDKLVLDLETNGTLDPEEAIRR AATILQQQLAAFVDLKGDSEPVVEEQEDEIDPILLRPVDDLELTVRSANCLKAENIYY IGDLIQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLDNWPPASLKKDDKATA" misc_feature complement(4754462..4755409) /gene="rpoA" /locus_tag="PA4238" /note="DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Transcription]; Region: RpoA; COG0202" /db_xref="CDD:439972" gene complement(4755447..4756067) /gene="rpsD" /locus_tag="PA4239" /db_xref="GeneID:881814" CDS complement(4755447..4756067) /gene="rpsD" /locus_tag="PA4239" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S4" /protein_id="NP_252929.1" /db_xref="GeneID:881814" /translation="MARYIGPKCKLSRREGTDLFLKSGARALDSKCKAENVPGQHGQR RGRLSDYGLQLREKQKVRRIYGVLERQFRGYYQEASRRKGSTGENLLQLLECRLDNVV YRMGFGSTRSESRQLVSHKAITVNGQTVNIPSYQVKAGDVVAVREKSKNQLRIAQALE LCGQRGRVEWVEVDLDKKAGTFKSAPARSDLSADINENLIVELYSK" misc_feature complement(4755450..4756067) /gene="rpsD" /locus_tag="PA4239" /note="Ribosomal protein S4 or related protein [Translation, ribosomal structure and biogenesis]; Region: RpsD; COG0522" /db_xref="CDD:440288" gene complement(4756084..4756473) /gene="rpsK" /locus_tag="PA4240" /db_xref="GeneID:881817" CDS complement(4756084..4756473) /gene="rpsK" /locus_tag="PA4240" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S11" /protein_id="NP_252930.1" /db_xref="GeneID:881817" /translation="MAKPAARPRKKVKKTVVDGIAHIHASFNNTIVTITDRQGNALSW ATSGGSGFRGSRKSTPFAAQVAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNA CGYKIASITDVTPIPHNGCRPPKKRRV" misc_feature complement(4756087..4756470) /gene="rpsK" /locus_tag="PA4240" /note="30S ribosomal protein S11; Validated; Region: PRK05309" /db_xref="CDD:180007" gene complement(4756492..4756848) /gene="rpsM" /locus_tag="PA4241" /db_xref="GeneID:881818" CDS complement(4756492..4756848) /gene="rpsM" /locus_tag="PA4241" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S13" /protein_id="NP_252931.1" /db_xref="GeneID:881818" /translation="MARIAGVNIPDNKHTVISLTYIYGVGRTTAQSICAATGVNPAAK IKDLSDEQIDQLRNEVAKITTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRT KTNARTRKGPRKPIRK" misc_feature complement(4756495..4756848) /gene="rpsM" /locus_tag="PA4241" /note="30S ribosomal protein S13; Validated; Region: rpsM; PRK05179" /db_xref="CDD:235358" gene complement(4756979..4757095) /gene="rpmJ" /locus_tag="PA4242" /db_xref="GeneID:881839" CDS complement(4756979..4757095) /gene="rpmJ" /locus_tag="PA4242" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L36" /protein_id="NP_252932.1" /db_xref="GeneID:881839" /translation="MKVRASVKKLCRNCKIIRRDGIVRVICSAEPRHKQRQG" misc_feature complement(4756982..4757095) /gene="rpmJ" /locus_tag="PA4242" /note="Ribosomal protein L36 [Translation, ribosomal structure and biogenesis]; Region: RpmJ; COG0257" /db_xref="CDD:440027" gene complement(4757124..4758452) /gene="secY" /locus_tag="PA4243" /db_xref="GeneID:881804" CDS complement(4757124..4758452) /gene="secY" /locus_tag="PA4243" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecY" /protein_id="NP_252933.1" /db_xref="GeneID:881804" /translation="MAKQGALSALSNGGLSELWARLRFLFLAIIVYRIGAHIPVPGIN PDRLAALFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQLMTAISPQLE QLKKEGESGRRKISQYTRYGTVVLALVQAIGMSVGLGSQGVAFSNDFGFYFVAVTTFV AGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQSFESARQGDINIFALIGV GLLAVAIIAFVVFIERGQRRIAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFAS SILLFPASLGSWFGQSEGLGWLQDVAQAIAPGQPLNILLFTAGIVFFCFFYTALMFNP KDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLTMFGALYMTAVCLLPQFLVVAAHV PFYLGGTSLLIVVVVVMDFMAQVQSHLVSHQYESLMKKANLKGYGSGMLR" misc_feature complement(4757166..4758437) /gene="secY" /locus_tag="PA4243" /note="Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport]; Region: SecY; COG0201" /db_xref="CDD:439971" gene complement(4758453..4758887) /gene="rplO" /locus_tag="PA4244" /db_xref="GeneID:881805" CDS complement(4758453..4758887) /gene="rplO" /locus_tag="PA4244" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L15" /protein_id="NP_252934.1" /db_xref="GeneID:881805" /translation="MQLNDLRSAPGARREKHRPGRGIGSGLGKTGGRGHKGLTSRSGG KVAPGFEGGQQPLHRRLPKFGFVSLKAMDRAEVRTSELAKVEGDVVSLQTLKDANLIN QHVQRVKVMLSGEVGRAVTLKGIAATKGARAAIEAAGGKFED" misc_feature complement(4758459..4758887) /gene="rplO" /locus_tag="PA4244" /note="Ribosomal protein L15 [Translation, ribosomal structure and biogenesis]; Region: RplO; COG0200" /db_xref="CDD:439970" gene complement(4758891..4759067) /gene="rpmD" /locus_tag="PA4245" /db_xref="GeneID:881787" CDS complement(4758891..4759067) /gene="rpmD" /locus_tag="PA4245" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L30" /protein_id="NP_252935.1" /db_xref="GeneID:881787" /translation="MATVKVTLVKSLNGRLANHKACVKGLGLRRINHTVEVQDTPENR GMINKAYYLLRVEG" misc_feature complement(4758897..4759067) /gene="rpmD" /locus_tag="PA4245" /note="50S ribosomal protein L30; Reviewed; Region: rpmD; PRK05611" /db_xref="CDD:180163" misc_feature complement(order(4758930..4758935,4758939..4758947, 4758954..4758959,4758972..4758974,4758981..4758983, 4758987..4758995,4759002..4759007,4759014..4759022, 4759026..4759031,4759035..4759040)) /gene="rpmD" /locus_tag="PA4245" /note="23S rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:100100" gene complement(4759070..4759570) /gene="rpsE" /locus_tag="PA4246" /db_xref="GeneID:881788" CDS complement(4759070..4759570) /gene="rpsE" /locus_tag="PA4246" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S5" /protein_id="NP_252936.1" /db_xref="GeneID:881788" /translation="MANNEQKRDEGYIEKLVQVNRVAKTVKGGRIFAFTALTVVGDGK GRVGFGRGKAREVPAAIQKAMEAARRNMIQVDLNGTTLQYPTKSAHGASKVYMQPASE GTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKNMQAPEAVAAKRGK SVEEIL" misc_feature complement(4759073..4759570) /gene="rpsE" /locus_tag="PA4246" /note="30S ribosomal protein S5; Validated; Region: rpsE; PRK00550" /db_xref="CDD:234790" gene complement(4759574..4759924) /gene="rplR" /locus_tag="PA4247" /db_xref="GeneID:881795" CDS complement(4759574..4759924) /gene="rplR" /locus_tag="PA4247" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L18" /protein_id="NP_252937.1" /db_xref="GeneID:881795" /translation="MSVKKETRLRRARKARLKMRELETVRLCVYRSSQHIYAQVIAAD GGKVLASASTLDKDLREGATGNIDAAKKVGQLVAERAKAAGVTQVAFDRSGFKYHGRV KALADAAREGGLEF" misc_feature complement(4759577..4759864) /gene="rplR" /locus_tag="PA4247" /note="Ribosomal protein L18 [Translation, ribosomal structure and biogenesis]; Region: RplR; COG0256" /db_xref="CDD:440026" gene complement(4759935..4760468) /gene="rplF" /locus_tag="PA4248" /db_xref="GeneID:881796" CDS complement(4759935..4760468) /gene="rplF" /locus_tag="PA4248" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L6" /protein_id="NP_252938.1" /db_xref="GeneID:881796" /translation="MSRVAKNPVKLPAGVEIKLAGQQLSIKGAKGALELKVHPSVEVI QDSGELRFAARNGDQQTRAMAGTTRALVNNMVVGVSQGFERKLQLVGVGYKAQAKGQV LSLSLGFSHPVDYELPAGIVAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGK GVRYADEVVRRKEAKKK" misc_feature complement(4759938..4760465) /gene="rplF" /locus_tag="PA4248" /note="Ribosomal protein L6P/L9E [Translation, ribosomal structure and biogenesis]; Region: RplF; COG0097" /db_xref="CDD:439867" gene complement(4760480..4760872) /gene="rpsH" /locus_tag="PA4249" /db_xref="GeneID:881738" CDS complement(4760480..4760872) /gene="rpsH" /locus_tag="PA4249" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S8" /protein_id="NP_252939.1" /db_xref="GeneID:881738" /translation="MSMQDPLADMLTRIRNAQMAEKTVVSMPSSKLKAAVAKVLKDEG YIADFQISSEVKPQLSIELKYFEGKPVIEEVKRISRPGLRQYKSVEQLPKVRGGLGVS IVSTNKGVMTDRAARAAGVGGEVLCTVF" misc_feature complement(4760483..4760869) /gene="rpsH" /locus_tag="PA4249" /note="30S ribosomal protein S8; Validated; Region: rpsH; PRK00136" /db_xref="CDD:234658" gene complement(4761062..4761367) /gene="rpsN" /locus_tag="PA4250" /db_xref="GeneID:881778" CDS complement(4761062..4761367) /gene="rpsN" /locus_tag="PA4250" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S14" /protein_id="NP_252940.1" /db_xref="GeneID:881778" /translation="MAKESMKNRELKRQLTVAKYAKKRAELKAIIANPNSSAEERWNA QVALQKQPRDASASRLRNRCRLTGRPHGFYRKFGLSRNKLREAAMRGDVPGLVKASW" misc_feature complement(4761065..4761367) /gene="rpsN" /locus_tag="PA4250" /note="30S ribosomal protein S14; Reviewed; Region: rpsN; PRK08881" /db_xref="CDD:181574" gene complement(4761381..4761920) /gene="rplE" /locus_tag="PA4251" /db_xref="GeneID:881779" CDS complement(4761381..4761920) /gene="rplE" /locus_tag="PA4251" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L5" /protein_id="NP_252941.1" /db_xref="GeneID:881779" /translation="MARLKEIYRKEIAPKLKEELQLANVMEVPRVTKITLNMGLGEAV GDKKIIENAVADLEKITGQKPVVTYARKSIAGFKIREGWPIGVKVTLRSDRMYEFLDR LLSISLPRVRDFRGLNAKSFDGRGNYSMGVKEQIIFPEIDYDKIDALRGLDITLTTTA RTDDEGRALLRAFKFPFRN" misc_feature complement(4761384..4761920) /gene="rplE" /locus_tag="PA4251" /note="Ribosomal protein L5 [Translation, ribosomal structure and biogenesis]; Region: RplE; COG0094" /db_xref="CDD:439864" gene complement(4761940..4762254) /gene="rplX" /locus_tag="PA4252" /db_xref="GeneID:881810" CDS complement(4761940..4762254) /gene="rplX" /locus_tag="PA4252" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L24" /protein_id="NP_252942.1" /db_xref="GeneID:881810" /translation="MQKIRRDDEVIVIAGKDKGKRGKVLKVLADDRLVVGGVNLIKRH TKPNPMLGQQGGIVEKEAPLHVSNVAIFNTETSKADRVGFKVEDGKKIRVFKSTQKPV QA" misc_feature complement(4761949..4762254) /gene="rplX" /locus_tag="PA4252" /note="Ribosomal protein L24 [Translation, ribosomal structure and biogenesis]; Region: RplX; COG0198" /db_xref="CDD:439968" gene complement(4762267..4762635) /gene="rplN" /locus_tag="PA4253" /db_xref="GeneID:881811" CDS complement(4762267..4762635) /gene="rplN" /locus_tag="PA4253" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L14" /protein_id="NP_252943.1" /db_xref="GeneID:881811" /translation="MIQTQSMLDVADNSGARRVMCIKVLGGSHRRYAGIGDIIKVTVK EAIPRGKVKKGQVMTAVVVRTKHGVRRTDGSIIRFDGNAAVLLNNKQEPIGTRIFGPV TRELRTEKFMKIVSLAPEVL" misc_feature complement(4762270..4762635) /gene="rplN" /locus_tag="PA4253" /note="Ribosomal protein L14 [Translation, ribosomal structure and biogenesis]; Region: RplN; COG0093" /db_xref="CDD:439863" gene complement(4762659..4762925) /gene="rpsQ" /locus_tag="PA4254" /db_xref="GeneID:881770" CDS complement(4762659..4762925) /gene="rpsQ" /locus_tag="PA4254" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S17" /protein_id="NP_252944.1" /db_xref="GeneID:881770" /translation="MAEAQKTVRTLTGRVVSDKMDKTVTVLIERRVKHPIYGKYVKRS TKLHAHDESNQCRIGDLVTIRETRPLAKTKAWTLVDIVERAVEV" misc_feature complement(4762665..4762925) /gene="rpsQ" /locus_tag="PA4254" /note="Ribosomal protein S17 [Translation, ribosomal structure and biogenesis]; Region: RpsQ; COG0186" /db_xref="CDD:439956" gene complement(4762928..4763119) /gene="rpmC" /locus_tag="PA4255" /db_xref="GeneID:881771" CDS complement(4762928..4763119) /gene="rpmC" /locus_tag="PA4255" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L29" /protein_id="NP_252945.1" /db_xref="GeneID:881771" /translation="MKANELREKSVEQLNEQLLGLLRDQFNLRMQKATGQLGQSHLLS QVKRDIARVKTVLNQQAGK" misc_feature complement(4762931..4763119) /gene="rpmC" /locus_tag="PA4255" /note="Ribosomal protein L29 [Translation, ribosomal structure and biogenesis]; Region: RpmC; COG0255" /db_xref="CDD:440025" gene complement(4763119..4763532) /gene="rplP" /locus_tag="PA4256" /db_xref="GeneID:881758" CDS complement(4763119..4763532) /gene="rplP" /locus_tag="PA4256" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L16" /protein_id="NP_252946.1" /db_xref="GeneID:881758" /translation="MLQPKRTKFRKQMTGHNRGLAHRGSKVSFGEYALKATSRGRLTA RQIESARRALTRHVKRGGKIWIRVFPDKPVTKKPLEVRMGKGKGGVEYWVAQIQPGKV LYEIEGVSEELAREAFALAAAKLPLATSFVKRTVM" misc_feature complement(4763194..4763532) /gene="rplP" /locus_tag="PA4256" /note="Ribosomal protein L16/L10AE [Translation, ribosomal structure and biogenesis]; Region: RplP; COG0197" /db_xref="CDD:439967" gene complement(4763544..4764230) /gene="rpsC" /locus_tag="PA4257" /db_xref="GeneID:881761" CDS complement(4763544..4764230) /gene="rpsC" /locus_tag="PA4257" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S3" /protein_id="NP_252947.1" /db_xref="GeneID:881761" /translation="MGQKVHPNGIRLGIVKEHTSVWYADRKNYADYLFADLKVREYLQ DKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHIN IEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGA EIARTEWYREGRVPLHTLRADIDYATYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPV APAPRKKAAR" misc_feature complement(4763556..4764230) /gene="rpsC" /locus_tag="PA4257" /note="Ribosomal protein S3 [Translation, ribosomal structure and biogenesis]; Region: RpsC; COG0092" /db_xref="CDD:439862" gene complement(4764243..4764575) /gene="rplV" /locus_tag="PA4258" /db_xref="GeneID:881762" CDS complement(4764243..4764575) /gene="rplV" /locus_tag="PA4258" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L22" /protein_id="NP_252948.1" /db_xref="GeneID:881762" /translation="MEVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAA EIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCH ITVKVADK" misc_feature complement(4764246..4764575) /gene="rplV" /locus_tag="PA4258" /note="Ribosomal protein L22 [Translation, ribosomal structure and biogenesis]; Region: RplV; COG0091" /db_xref="CDD:439861" gene complement(4764588..4764863) /gene="rpsS" /locus_tag="PA4259" /db_xref="GeneID:881748" CDS complement(4764588..4764863) /gene="rpsS" /locus_tag="PA4259" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S19" /protein_id="NP_252949.1" /db_xref="GeneID:881748" /translation="MPRSLKKGPFIDLHLLKKVEVAVEKNDRKPIKTWSRRSMILPHM VGLTIAVHNGRQHVPVLVNEDMVGHKLGEFAATRTYRGHAADKKAKR" misc_feature complement(4764591..4764863) /gene="rpsS" /locus_tag="PA4259" /note="30S ribosomal protein S19; Reviewed; Region: rpsS; PRK00357" /db_xref="CDD:178985" gene complement(4764880..4765701) /gene="rplB" /locus_tag="PA4260" /db_xref="GeneID:881749" CDS complement(4764880..4765701) /gene="rplB" /locus_tag="PA4260" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L2" /protein_id="NP_252950.1" /db_xref="GeneID:881749" /translation="MAIVKCKPTSAGRRFVVKVVNQELHKGAPYAPLLEKKSKSGGRN NNGRITTRHIGGGHKQHYRLVDFRRNKDGIPAIVERVEYDPNRTAHIALLKYADGERR YIIAPKGVAAGDQLISGIGAPIKAGNSMPLRNIPVGSTVHGIELKPGKGAQIARSAGA SAQLVAREGAYVTLRLRSGEMRKVLAECRATLGEVSNSEHSLRSLGKAGATRWRGVRP TVRGVAMNPVDHPHGGGEGRTSAGRHPVSPWGLQTKGKKTRSNKRTDNMIVRRRK" misc_feature complement(4764883..4765701) /gene="rplB" /locus_tag="PA4260" /note="Ribosomal protein L2 [Translation, ribosomal structure and biogenesis]; Region: RplB; COG0090" /db_xref="CDD:439860" gene complement(4765713..4766012) /gene="rplW" /locus_tag="PA4261" /db_xref="GeneID:881753" CDS complement(4765713..4766012) /gene="rplW" /locus_tag="PA4261" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L23" /protein_id="NP_252951.1" /db_xref="GeneID:881753" /translation="MNQERVFKVLLGPHISEKATGLADGKSQFVFKVATDATKLEIKK AVESLFSVKVQRVTTLNVKGKTKRTARGLGKRNDWKKAYIALQPGQDLDFATSAE" misc_feature complement(4765719..4765994) /gene="rplW" /locus_tag="PA4261" /note="50S ribosomal protein L23; Reviewed; Region: rplW; PRK05738" /db_xref="CDD:235586" gene complement(4766009..4766611) /gene="rplD" /locus_tag="PA4262" /db_xref="GeneID:881754" CDS complement(4766009..4766611) /gene="rplD" /locus_tag="PA4262" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L4" /protein_id="NP_252952.1" /db_xref="GeneID:881754" /translation="MQLNVNGAQAIEVSERTFGGEFNETLVHQAVVAYMAGGRQGSKA QKTRSEVSGGGKKPWRQKGTGRARAGTIRSPIWRGGGTTFAAKPRSHEQKLNKKMYRA ALRSILAELVRLDRLVVVADFAVDAPKTKGLVAKLDTLGLKDVLIVTDGVDENLYLAA RNLAHVDVRDVQGSDPVSLIAYDKVLVTVSAVKKFEELLG" misc_feature complement(4766012..4766605) /gene="rplD" /locus_tag="PA4262" /note="Ribosomal protein L4 [Translation, ribosomal structure and biogenesis]; Region: RplD; COG0088" /db_xref="CDD:439858" gene complement(4766625..4767260) /gene="rplC" /locus_tag="PA4263" /db_xref="GeneID:881728" CDS complement(4766625..4767260) /gene="rplC" /locus_tag="PA4263" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L3" /protein_id="NP_252953.1" /db_xref="GeneID:881728" /translation="MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETD GYRAVQVTAGERRASRVTKAQAGHFAKANVAAGRGVWEFRLGEEQYAAGDQITVDLFQ AGQMVDVTGESKGKGFAGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKK MSGHLGAERVTVQSLEIVRVDAERNLLLVKGAVPGATGGDVIVRPAAKARG" misc_feature complement(4766631..4767260) /gene="rplC" /locus_tag="PA4263" /note="Ribosomal protein L3 [Translation, ribosomal structure and biogenesis]; Region: RplC; COG0087" /db_xref="CDD:439857" gene complement(4767343..4767654) /gene="rpsJ" /locus_tag="PA4264" /db_xref="GeneID:881717" CDS complement(4767343..4767654) /gene="rpsJ" /locus_tag="PA4264" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S10" /protein_id="NP_252954.1" /db_xref="GeneID:881717" /translation="MQNQQIRIRLKAFDHRLIDQSTQEIVETAKRTGAQVRGPIPLPT RKERFTVLISPHVNKDARDQYEIRTHKRVLDIVQPTDKTVDALMKLDLAAGVEVQISL G" misc_feature complement(4767349..4767654) /gene="rpsJ" /locus_tag="PA4264" /note="30S ribosomal protein S10; Reviewed; Region: rpsJ; PRK00596" /db_xref="CDD:179076" gene complement(4767811..4769004) /gene="tufA" /locus_tag="PA4265" /db_xref="GeneID:881718" CDS complement(4767811..4769004) /gene="tufA" /locus_tag="PA4265" /EC_number="3.6.5.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="elongation factor Tu" /protein_id="NP_252955.1" /db_xref="GeneID:881718" /translation="MAKEKFERNKPHVNVGTIGHVDHGKTTLTAALTKVCSDTWGGSA RAFDQIDNAPEEKARGITINTSHVEYDSAVRHYAHVDCPGHADYVKNMITGAAQMDGA ILVCSAADGPMPQTREHILLSRQVGVPYIVVFLNKADMVDDAELLELVEMEVRDLLNT YDFPGDDTPIIIGSALMALEGKDDNGIGVSAVQKLVETLDSYIPEPVRAIDQPFLMPI EDVFSISGRGTVVTGRVERGIIKVQEEVEIVGIKATTKTTCTGVEMFRKLLDEGRAGE NVGILLRGTKREDVERGQVLAKPGTIKPHTKFECEVYVLSKEEGGRHTPFFKGYRPQF YFRTTDVTGNCELPEGVEMVMPGDNIKMVVTLIAPIAMEDGLRFAIREGGRTVGAGVV AKIIE" misc_feature complement(4767814..4769004) /gene="tufA" /locus_tag="PA4265" /note="elongation factor Tu; Reviewed; Region: PRK00049" /db_xref="CDD:234596" gene complement(4769035..4771155) /gene="fusA1" /locus_tag="PA4266" /db_xref="GeneID:881744" CDS complement(4769035..4771155) /gene="fusA1" /locus_tag="PA4266" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="elongation factor G" /protein_id="NP_252956.1" /db_xref="GeneID:881744" /translation="MARTTPINRYRNIGICAHVDAGKTTTTERVLFYTGVNHKLGEVH DGAATTDWMVQEQERGITITSAAVTTFWKGSRGQYDNYRVNVIDTPGHVDFTIEVERS LRVLDGAVVVFCGTSGVEPQSETVWRQANKYGVPRIVYVNKMDRQGANFLRVVEQIKK RLGHTPVPVQLAIGAEENFVGQVDLIKMKAIYWNDDDKGMTYREEEIPAELKDLAEEW RSSMVEAAAEANEELMNKYLEEGELSEAEIKEGLRLRTLACEIVPAVCGSSFKNKGVP LVLDAVIDYLPAPTEIPAIKGVSPDDETVEDERHADDNEPFSSLAFKIATDPFVGTLT FARVYSGVLSSGDSVLNSVKGKKERVGRMVQMHANQREEIKEVRAGDIAALIGMKDVT TGDTLCSIEKPIILERMDFPEPVISVAVEPKTKADQEKMGIALGKLAQEDPSFRVKTD EESGQTIISGMGELHLDIIVDRMKREFGVEANIGKPQVAYRETITKDNVEIEGKFVRQ SGGRGQFGHCWIRFSAADVDEKGNITEGLVFENEVVGGVVPKEYIPAIQKGIEEQMKN GVVAGYPLIGLKATVFDGSYHDVDSNEMAFKIAASMATKQLAQKGGGKVLEPIMKVEV VTPEDYMGDVMGDLNRRRGLIQGMEDTVSGKVIRAEVPLGEMFGYATDVRSMSQGRAS YSMEFSKYAEAPSNIVEALVKKQG" misc_feature complement(4769038..4771155) /gene="fusA1" /locus_tag="PA4266" /note="Translation elongation factor EF-G, a GTPase [Translation, ribosomal structure and biogenesis]; Region: FusA; COG0480" /db_xref="CDD:440248" gene complement(4771186..4771656) /gene="rpsG" /locus_tag="PA4267" /db_xref="GeneID:881745" CDS complement(4771186..4771656) /gene="rpsG" /locus_tag="PA4267" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S7" /protein_id="NP_252957.1" /db_xref="GeneID:881745" /translation="MPRRRVAAKREVLADPKYGSQILAKFMNHVMESGKKAVAERIVY GALDKVKERGKADPLETFEKALDAIAPLVEVKSRRVGGATYQVPVEVRPSRRNALAMR WLVDFARKRGEKSMALRLAGELLDAAEGKGAAVKKREDVHRMAEANKAFSHYRF" misc_feature complement(4771189..4771656) /gene="rpsG" /locus_tag="PA4267" /note="30S ribosomal protein S7; Validated; Region: PRK05302" /db_xref="CDD:235398" misc_feature complement(order(4771300..4771302,4771309..4771314, 4771330..4771332,4771351..4771353,4771363..4771365, 4771372..4771377,4771402..4771404,4771414..4771416, 4771429..4771431,4771531..4771536,4771543..4771557, 4771567..4771575)) /gene="rpsG" /locus_tag="PA4267" /note="rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:271248" misc_feature complement(order(4771525..4771527,4771534..4771539, 4771546..4771548)) /gene="rpsG" /locus_tag="PA4267" /note="S9 interface [polypeptide binding]; other site" /db_xref="CDD:271248" misc_feature complement(4771210..4771212) /gene="rpsG" /locus_tag="PA4267" /note="S11 interface [polypeptide binding]; other site" /db_xref="CDD:271248" gene complement(4771756..4772127) /gene="rpsL" /locus_tag="PA4268" /db_xref="GeneID:881709" CDS complement(4771756..4772127) /gene="rpsL" /locus_tag="PA4268" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S12" /protein_id="NP_252958.1" /db_xref="GeneID:881709" /translation="MATINQLVRKPRKRMVDKSDVPALQNCPQRRGVCTRVYTTTPKK PNSALRKVCRVRLTNGFEVSSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL DTSGVKDRKQGRSKYGAKRPK" misc_feature complement(4771759..4772127) /gene="rpsL" /locus_tag="PA4268" /note="Ribosomal protein S12 [Translation, ribosomal structure and biogenesis]; Region: RpsL; COG0048" /db_xref="CDD:439818" gene complement(4772279..4776478) /gene="rpoC" /locus_tag="PA4269" /db_xref="GeneID:881710" CDS complement(4772279..4776478) /gene="rpoC" /locus_tag="PA4269" /EC_number="2.7.7.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit beta'" /protein_id="NP_252959.1" /db_xref="GeneID:881710" /translation="MKDLLNLLKNQGQIEEFDAIRIGLASPEMIRSWSFGEVKKPETI NYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERM GHIELASPVAHIWFLKSLPSRIGLLLDMTLRDIERVLYFESYVVIDPGMTTLEKGQLL NDEQYFEALEEFGDDFDARMGAEAVHELLNAIDLEHEIGRLREEIPQTNSETKIKKLS KRLKLMEAFQGSGNKPEWMVLTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRN NRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGK QGRFRQNLLGKRVDYSGRSVITVGPTLRLHQCGLPKKMALELFKPFIFGKLEGRGMAT TIKAAKKMVERELPEVWDVLAEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVM GLYYMTREAINAKGEGMAFADLQEVDRAYRSGQASLHARVKVRINEKIKGEDGQLTAN TRIVDTTVGRALLFQVVPAGLPFDVVNQSMKKKAISKLINHCYRVVGLKDTVIFADQL MYTGFAYSTISGVSIGVNDFVIPDEKARIINAATDEVKEIESQYASGLVTQGEKYNKV IDLWSKANDEVSKAMMANLSKEKVVDREGKEVDQESFNSMYMMADSGARGSAAQIRQL AGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTR RLVDVAQDLVVTEIDCGTEHGLLMSPHIEGGDVVEPLGERVLGRVIARDVFKPGSDEV IVPAGTLIDEKWVDFLEVMSVDEVVVRSPITCETRHGICAMCYGRDLARGHRVNIGEA VGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAADNVQVKNGGTIRLHNLKHVVRADGA LVAVSRSGELAVADDFGRERERYKLPYGAVISVKEGDKVDPGAIVAKWDPHTHPIVTE VDGTVAFVGMEEGITVKRQTDELTGLTNIEVMDPKDRPAAGKDIRPAVKLIDAAGKDL LLPGTDVPAQYFLPANALVNLTDGAKVSIGDVVARIPQETSKTRDITGGLPRVADLFE ARRPKEPSILAEISGTISFGKETKGKRRLVITPNDGSDPYEELIPKWRHLNVFEGEQV NRGEVISDGPSNPHDILRLLGVSSLAKYIVNEIQDVYRLQGVKINDKHIETILRQMLR KVEVSESGDSSFIKGDQVELTQVLEENEQLGTEDKFPAKYERVLLGITKASLSTESFI SAASFQETTRVLTEAAVTGKRDFLRGLKENVVVGRLIPAGTGLAYHSERKRQRDLGKP QRVSASEAEAALTEALNSSGN" misc_feature complement(4772357..4776433) /gene="rpoC" /locus_tag="PA4269" /note="DNA-directed RNA polymerase subunit beta'; Provisional; Region: PRK00566" /db_xref="CDD:234794" gene complement(4776544..4780617) /gene="rpoB" /locus_tag="PA4270" /db_xref="GeneID:881699" CDS complement(4776544..4780617) /gene="rpoB" /locus_tag="PA4270" /EC_number="2.7.7.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit beta" /protein_id="NP_252960.1" /db_xref="GeneID:881699" /translation="MAYSYTEKKRIRKDFSKLPDVMDVPYLLAIQLDSYREFLQAGAT KEQFRDVGLHAAFKSVFPIISYSGNAALEYVGYRLGEPAFDVKECVLRGVTFAVPLRV KVRLIIFDRESSNKAIKDIKEQEVYMGEIPLMTENGTFIINGTERVIVSQLHRSPGVF FDHDRGKTHSSGKLLYSARIIPYRGSWLDFEFDPKDCVFVRIDRRRKLPASVLLRALG YSTEEILNAFYATNVFHIKGETLNLELVPQRLRGEVASIDIKDGSGKVIVEQGRRITA RHINQLEKAGVSQLEVPFDYLIGRTIAKAIVHPATGEIIAECNTELTLDLLAKVAKAQ VVRIETLYTNDIDCGPFISDTLKIDNTSNQLEALVEIYRMMRPGEPPTKEAAETLFGN LFFSAERYDLSAVGRMKFNRRIGRTEIEGPGVLSKEDIIDVLKTLVDIRNGKGIVDDI DHLGNRRVRCVGEMAENQFRVGLVRVERAVKERLSMAESEGLMPQDLINAKPVAAAIK EFFGSSQLSQFMDQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPI ETPEGPNIGLINSLATYARTNKYGFLESPYRVVKDSLVTDEIVFLSAIEEADHVIAQA SATLNEKGQLVDELVAVRHLNEFTVKAPEDVTLMDVSPKQVVSVAASLIPFLEHDDAN RALMGSNMQRQAVPTLRADKPLVGTGMERNVARDSGVCVVARRGGVIDSVDASRVVVR VADDEVETGEAGVDIYNLTKYTRSNQNTCINQRPLVSKGDVVARGDILADGPSTDMGE LALGQNMRVAFMPWNGFNFEDSICLSERVVQEDRFTTIHIQELTCVARDTKLGPEEIT ADIPNVGEAALNKLDEAGIVYVGAEVQAGDILVGKVTPKGETQLTPEEKLLRAIFGEK ASDVKDTSLRVPTGTKGTVIDVQVFTRDGVERDSRALSIEKMQLDQIRKDLNEEFRIV EGATFERLRAALVGAKAEGGPALKKGTEITDDYLDGLERGQWFKLRMADDALNEQLEK AQAYISDRRQLLDDKFEDKKRKLQQGDDLAPGVLKIVKVYLAIKRRIQPGDKMAGRHG NKGVVSVIMPVEDMPHDANGTPVDIVLNPLGVPSRMNVGQILETHLGLAAKGLGEKIN RMLEEQRKVAELRKFLHEIYNEIGGREENLDELGDNEILALAKNLRGGVPMATPVFDG AKEREIKAMLKLADLPESGQMRLFDGRTGNQFERPTTVGYMYMLKLNHLVDDKMHARS TGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMY KNIVDGDHRMEAGMPESFNVLIKEIRSLGIDIELETE" misc_feature complement(4776547..4780617) /gene="rpoB" /locus_tag="PA4270" /note="DNA-directed RNA polymerase subunit beta; Reviewed; Region: rpoB; PRK00405" /db_xref="CDD:234749" gene complement(4780768..4780833) /locus_tag="PA4270.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965629" ncRNA complement(4780768..4780833) /ncRNA_class="other" /locus_tag="PA4270.1" /product="P26" /db_xref="GeneID:6965629" gene complement(4780839..4781207) /gene="rplL" /locus_tag="PA4271" /db_xref="GeneID:881701" CDS complement(4780839..4781207) /gene="rplL" /locus_tag="PA4271" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L7/L12" /protein_id="NP_252961.1" /db_xref="GeneID:881701" /translation="MALTNEDIINAVSEMSVMQVVELIKAMEEKFGVTAAAATVAAAG PAAAAAEEQTEFTIVLAEAGDKKVNVIKVVRELTGLGLKEAKAVVDGAPGVVKEGASK EEAEAAKKALEEAGAKVELK" misc_feature complement(4780842..4781207) /gene="rplL" /locus_tag="PA4271" /note="Ribosomal protein L7/L12 [Translation, ribosomal structure and biogenesis]; Region: RplL; COG0222" /db_xref="CDD:439992" misc_feature complement(order(4780896..4780898,4780905..4780907, 4780911..4780916,4780956..4780961,4780965..4780967, 4780971..4780976,4780980..4780982,4781043..4781048, 4781076..4781084,4781124..4781126,4781133..4781135, 4781142..4781147,4781154..4781162,4781199..4781201)) /gene="rplL" /locus_tag="PA4271" /note="core dimer interface [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature complement(order(4781115..4781117,4781130..4781132, 4781169..4781171,4781181..4781183,4781190..4781192)) /gene="rplL" /locus_tag="PA4271" /note="peripheral dimer interface [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature complement(order(4781115..4781117,4781124..4781126, 4781136..4781141,4781148..4781150)) /gene="rplL" /locus_tag="PA4271" /note="L10 interface [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature complement(order(4780950..4780952,4780959..4780964, 4780983..4780985,4780992..4780997,4781004..4781009)) /gene="rplL" /locus_tag="PA4271" /note="L11 interface [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature complement(order(4780950..4780952,4780959..4780964, 4780983..4780985,4780992..4780994,4781004..4781006)) /gene="rplL" /locus_tag="PA4271" /note="putative EF-Tu interaction site [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature complement(order(4780983..4780985,4780992..4780997, 4781004..4781006)) /gene="rplL" /locus_tag="PA4271" /note="putative EF-G interaction site [polypeptide binding]; other site" /db_xref="CDD:100102" gene complement(4781286..4781786) /gene="rplJ" /locus_tag="PA4272" /db_xref="GeneID:881702" CDS complement(4781286..4781786) /gene="rplJ" /locus_tag="PA4272" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L10" /protein_id="NP_252962.1" /db_xref="GeneID:881702" /translation="MAIKLEDKKAIVAEVNEAAKAALSAVVADARGVTVGAMTGLRKE AREAGVYVKVVRNTLLKRAVEGTQFDVLNDVFKGPTLIAFSNEHPGAAARIFREFAKG QDKFEIKAAAFEGQFLAANQIDVLASLPTYDEAVSQLMSVIQGATSKLARTLAAIRDQ KEAAAA" misc_feature complement(4781298..4781777) /gene="rplJ" /locus_tag="PA4272" /note="50S ribosomal protein L10; Reviewed; Region: rplJ; PRK00099" /db_xref="CDD:234632" misc_feature complement(order(4781601..4781603,4781610..4781621, 4781751..4781753,4781760..4781765)) /gene="rplJ" /locus_tag="PA4272" /note="23S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:240223" misc_feature complement(order(4781307..4781309,4781313..4781318, 4781322..4781327,4781334..4781342,4781346..4781363, 4781367..4781372,4781379..4781384,4781391..4781393, 4781439..4781441,4781448..4781450,4781517..4781519)) /gene="rplJ" /locus_tag="PA4272" /note="Interface with L7/L12 ribosomal proteins [polypeptide binding]; other site" /db_xref="CDD:240223" gene 4781786..4781978 /locus_tag="PA4272.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965627" ncRNA 4781786..4781978 /ncRNA_class="other" /locus_tag="PA4272.1" /product="P27" /db_xref="GeneID:6965627" gene complement(4781985..4782680) /gene="rplA" /locus_tag="PA4273" /db_xref="GeneID:881704" CDS complement(4781985..4782680) /gene="rplA" /locus_tag="PA4273" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L1" /protein_id="NP_252963.1" /db_xref="GeneID:881704" /translation="MAKLTKRQKAIAEKVVAGKQYSFEEAAKLLAELSTIKFKESVDV AVNLGVDPRKSDQVVRGATVLPNGTGKSVRVAVFTQGPAAEAALAAGADKVGMDELAA EMKGGDLNYDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPDVATAVKNAKAGQ VRFRTDKNGIIHSSVGKVDFEPAKLQQNVEALLADLKRLKPSSSKGVYVKRVTLSTTM GPGLQIDLASLEA" misc_feature complement(4782003..4782680) /gene="rplA" /locus_tag="PA4273" /note="Ribosomal protein L1 [Translation, ribosomal structure and biogenesis]; Region: RplA; COG0081" /db_xref="CDD:439851" gene complement(4782680..4783111) /gene="rplK" /locus_tag="PA4274" /db_xref="GeneID:881705" CDS complement(4782680..4783111) /gene="rplK" /locus_tag="PA4274" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L11" /protein_id="NP_252964.1" /db_xref="GeneID:881705" /translation="MAKKIQAYIKLQVKAGQANPSPPVGPALGQHGVNIMEFCKAFNA KTQGQEPGLPTPVIITVYSDRSFTFETKSTPAAVLLKKAAGITSGSARPNSQKVGTVT RAQLEEIAKTKQADLTAADLDAAVRTIAGSARSMGLNVEGV" misc_feature complement(4782686..4783111) /gene="rplK" /locus_tag="PA4274" /note="50S ribosomal protein L11; Validated; Region: rplK; PRK00140" /db_xref="CDD:234661" misc_feature complement(order(4782704..4782712,4782716..4782721, 4782728..4782733,4782740..4782742,4782752..4782760, 4782773..4782775,4782848..4782850,4782869..4782871, 4782881..4782889,4783022..4783024,4783082..4783084)) /gene="rplK" /locus_tag="PA4274" /note="23S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:100101" misc_feature complement(order(4782755..4782760,4782767..4782772, 4782902..4782907,4782911..4782913,4782923..4782934, 4782938..4782940,4783082..4783084)) /gene="rplK" /locus_tag="PA4274" /note="L7/L12 interface [polypeptide binding]; other site" /db_xref="CDD:100101" misc_feature complement(order(4783022..4783024,4783034..4783036)) /gene="rplK" /locus_tag="PA4274" /note="putative thiostrepton binding site [active]" /db_xref="CDD:100101" misc_feature complement(order(4782821..4782823,4782830..4782832)) /gene="rplK" /locus_tag="PA4274" /note="L25 interface [polypeptide binding]; other site" /db_xref="CDD:100101" gene complement(4783228..4783761) /gene="nusG" /locus_tag="PA4275" /db_xref="GeneID:881693" CDS complement(4783228..4783761) /gene="nusG" /locus_tag="PA4275" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcription antitermination protein NusG" /protein_id="NP_252965.1" /db_xref="GeneID:881693" /translation="MAKRWYVVHAYSGYEKHVMRSLIERVKLAGMEEEFGEILVPTEE VVEMRNGQKRKSERKFFPGYVLVQMEMNEGTWHLVKDTPRVMGFIGGTADKPAPITDR EADAILRRVADSGDKPKPKTLFEPGETVRVIDGPFADFNGVVEEVNYEKSRIQVAVLI FGRSTPVELEFSQVEKV" misc_feature complement(4783234..4783749) /gene="nusG" /locus_tag="PA4275" /note="transcription termination/antitermination factor NusG; Region: nusG; TIGR00922" /db_xref="CDD:273341" gene complement(4783771..4784139) /gene="secE" /locus_tag="PA4276" /db_xref="GeneID:881694" CDS complement(4783771..4784139) /gene="secE" /locus_tag="PA4276" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecE" /protein_id="NP_252966.1" /db_xref="GeneID:881694" /translation="MNAKAEAKESRFDLLKWLLVAVLVVVAVVGNQYFSAQPILYRVL GILVLAVIAAFLALQTAKGQAFFSLAKEARVEIRKVVWPSRQETTQTTLIVVAVVLVM ALLLWGLDSLLGWLVSMIVG" misc_feature complement(<4783864..4784049) /gene="secE" /locus_tag="PA4276" /note="preprotein translocase subunit SecE; Reviewed; Region: secE; PRK05740" /db_xref="CDD:235587" gene complement(4784184..4784259) /locus_tag="PA4276.1" /db_xref="GeneID:3240231" tRNA complement(4784184..4784259) /locus_tag="PA4276.1" /product="tRNA-Trp" /db_xref="GeneID:3240231" gene complement(4784316..4785509) /gene="tufB" /locus_tag="PA4277" /db_xref="GeneID:881697" CDS complement(4784316..4785509) /gene="tufB" /locus_tag="PA4277" /EC_number="3.6.5.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="elongation factor Tu" /protein_id="NP_252967.1" /db_xref="GeneID:881697" /translation="MAKEKFERNKPHVNVGTIGHVDHGKTTLTAALTKVCSDTWGGSA RAFDQIDNAPEEKARGITINTSHVEYDSAVRHYAHVDCPGHADYVKNMITGAAQMDGA ILVCSAADGPMPQTREHILLSRQVGVPYIVVFLNKADMVDDAELLELVEMEVRDLLNT YDFPGDDTPIIIGSALMALEGKDDNGIGVSAVQKLVETLDSYIPEPVRAIDQPFLMPI EDVFSISGRGTVVTGRVERGIIKVQEEVEIVGIKATTKTTCTGVEMFRKLLDEGRAGE NVGILLRGTKREDVERGQVLAKPGTIKPHTKFECEVYVLSKEEGGRHTPFFKGYRPQF YFRTTDVTGNCELPEGVEMVMPGDNIKMVVTLIAPIAMEDGLRFAIREGGRTVGAGVV AKIIE" misc_feature complement(4784319..4785509) /gene="tufB" /locus_tag="PA4277" /note="elongation factor Tu; Reviewed; Region: PRK00049" /db_xref="CDD:234596" gene complement(4785593..4785668) /locus_tag="PA4277.1" /db_xref="GeneID:3240232" tRNA complement(4785593..4785668) /locus_tag="PA4277.1" /product="tRNA-Thr" /db_xref="GeneID:3240232" gene complement(4785688..4785761) /locus_tag="PA4277.2" /db_xref="GeneID:3240235" tRNA complement(4785688..4785761) /locus_tag="PA4277.2" /product="tRNA-Gly" /db_xref="GeneID:3240235" gene complement(4785788..4785872) /locus_tag="PA4277.3" /db_xref="GeneID:3240230" tRNA complement(4785788..4785872) /locus_tag="PA4277.3" /product="tRNA-Tyr" /db_xref="GeneID:3240230" gene complement(4786021..4786725) /locus_tag="PA4278" /db_xref="GeneID:881687" CDS complement(4786021..4786725) /locus_tag="PA4278" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252968.1" /db_xref="GeneID:881687" /translation="MRWFFLFLLALNVFYYVWHQQQSPLRAKEIAPLELYKDGQKNIL LLAESNLASRARSGSQVPAPSVPPAAEESIASESACLYLGGGGEEADARRLRQRLLGL DIEAEVEARGEMSVDYWVYLPPLASREAALRQLKELQARNIDSYLIGEGVLANGISLG MFSARDSAESAQVRLKTAGYEAELKELPRGQRDFWVRVAPGSRRLVDEQLLQELARDF KGLQHQIMSCKGVASP" misc_feature complement(4786180..>4786578) /locus_tag="PA4278" /note="Cell division protein FtsN [Cell cycle control, cell division, chromosome partitioning]; Region: FtsN; COG3087" /db_xref="CDD:442321" misc_feature complement(4786045..>4786257) /locus_tag="PA4278" /note="Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning]; Region: DedD; COG3147" /db_xref="CDD:442381" gene complement(4786734..4787480) /locus_tag="PA4279" /db_xref="GeneID:881667" CDS complement(4786734..4787480) /locus_tag="PA4279" /EC_number="2.7.1.33" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="pantothenate kinase" /protein_id="NP_252969.1" /db_xref="GeneID:881667" /translation="MILELDCGNSLIKWRVIEGAARSVAGGLAESDDALVEQLTSQQA LPVRACRLVSVRSEQETSQLVARLEQLFPVSALVASSGKQLAGVRNGYLDYQRLGLDR WLALVAAHHLAKKACLVIDLGTAVTSDLVAADGVHLGGYICPGMTLMRSQLRTHTRRI RYDDAEARRALASLQPGQATAEAVERGCLLMLRGFVREQYAMACELLGPDCEIFLTGG DAELVRDELAGARIMPDLVFVGLALACPIE" misc_feature complement(4786737..4787480) /locus_tag="PA4279" /note="pantothenate kinase; Reviewed; Region: PRK13322" /db_xref="CDD:237350" gene complement(4787477..4788415) /gene="birA" /locus_tag="PA4280" /db_xref="GeneID:881668" CDS complement(4787477..4788415) /gene="birA" /locus_tag="PA4280" /EC_number="6.3.4.15" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="biotin--protein ligase" /protein_id="NP_252970.1" /db_xref="GeneID:881668" /translation="MQTLLKLLQDGRFHSGEELGAVLGISRSAVWKRLQHLEAEHGLQ FHKVRGRGYRLASPLSLLDPRKIDSLWPVEIMPTVDSTNSEAMRRLAAGASTPFVIVA EQQTAGRGRRGRAWVSPYGENLYYSLAITVRGGARELEGLSLVVGLAVLRALESLGVQ DTGLKWPNDLLQGGKKIAGILLELSGDPADLCHVVIGIGINVNMKTATDIGQPWTSLR EALGELVDRSRLLSALNRQLADYLDRHSREGFAASREEWESCNLWQGAQVILSTALSS IEGRVLGVDSRGALRLEVDGVEQGFSGGELSLRLRQ" misc_feature complement(4787480..4788415) /gene="birA" /locus_tag="PA4280" /note="bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA; Region: PRK11886" /db_xref="CDD:237010" misc_feature complement(order(4787813..4787815,4787819..4787827, 4787873..4787875,4787879..4787881,4787888..4787890, 4787903..4787905,4787909..4787911,4787921..4787923, 4788035..4788043,4788065..4788076,4788083..4788094, 4788101..4788103,4788167..4788175)) /gene="birA" /locus_tag="PA4280" /note="active site" /db_xref="CDD:319741" misc_feature complement(4787888..4787890) /gene="birA" /locus_tag="PA4280" /note="catalytic site [active]" /db_xref="CDD:319741" gene complement(4788574..4788693) /locus_tag="PA4280.1" /db_xref="GeneID:3240240" rRNA complement(4788574..4788693) /locus_tag="PA4280.1" /product="5S ribosomal RNA" /db_xref="GeneID:3240240" gene complement(4788836..4791724) /locus_tag="PA4280.2" /db_xref="GeneID:3240221" rRNA complement(4788836..4791724) /locus_tag="PA4280.2" /product="23S ribosomal RNA" /db_xref="GeneID:3240221" gene complement(4791951..4792026) /locus_tag="PA4280.3" /db_xref="GeneID:3240242" tRNA complement(4791951..4792026) /locus_tag="PA4280.3" /product="tRNA-Ala" /db_xref="GeneID:3240242" gene complement(4792055..4792131) /locus_tag="PA4280.4" /db_xref="GeneID:3240225" tRNA complement(4792055..4792131) /locus_tag="PA4280.4" /product="tRNA-Ile" /db_xref="GeneID:3240225" gene complement(4792196..4793731) /locus_tag="PA4280.5" /db_xref="GeneID:3240239" rRNA complement(4792196..4793731) /locus_tag="PA4280.5" /product="16S ribosomal RNA" /db_xref="GeneID:3240239" gene 4794404..4795633 /gene="sbcD" /locus_tag="PA4281" /db_xref="GeneID:881611" CDS 4794404..4795633 /gene="sbcD" /locus_tag="PA4281" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="exonuclease SbcD" /protein_id="NP_252971.1" /db_xref="GeneID:881611" /translation="MRLIHTSDWHLGQTLHGQDRDHEHARFLDWLLRQLEEQRADVLL IAGDIFDTINPPLKAQERLYDFIVSAHRRLPRLEIVMIAGNHDSGARIELPAPLMKRL NAHAIGRIGWIDESLDSDRLLLPLHDADGQVAAWCLALPFLRPAEVTGGGLGDDYLAG IRQVHERLVAAAHARRTPGQALVAVSHAHMAGGSVSEDSERNLIIGNVEALPASLFPE QIAYVALGHLHKPQKVAGQERIRYSGSPLPLSFAEVNYRHQVLLVTLEGERLKDVQSL PVPRAVELLRIGPAPLGEVLDRIGELAEADLLNEQRPWLEVRVMLDQPQPDLRQQVES ALLGKACRLVRIASEYQRRDEEQAPLLGLDQLNPQELFSRAWESAYGSGPDAQALDDF ASLLQSVELATEEPPGK" misc_feature 4794404..4795537 /gene="sbcD" /locus_tag="PA4281" /note="exonuclease subunit SbcD; Provisional; Region: PRK10966" /db_xref="CDD:182871" gene 4795642..4799277 /locus_tag="PA4282" /db_xref="GeneID:881690" CDS 4795642..4799277 /locus_tag="PA4282" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="exonuclease" /protein_id="NP_252972.1" /db_xref="GeneID:881690" /translation="MKILAIRLKNLASLAGEQEIDFTREPLSSAGLFAITGPTGAGKS TVLDALCLALFGSTPRLESTSASSKVPDGRNELSSNDERNLLRRGCASGYAEVDFVGI DGHRYRARWETRRSRDKADGALQKSQQSLQDLETQQMLAANKKSEFREQLEQKLGLNF AQFTRAVLLAQSEFSAFLKASDNDRGALLEKLTDTGLYSQLSKAAYQRASQADEQRKQ LEQRLEGSLPLAEQARAGLEAALESHAQARLQEQQALQRLEGQQQWFTEEQRLLQSCE HAQGQLAEARQAWDALATERETLQWLERLAPVRGLIERLKQLEQELRHSEQQQRQRTE QQAAGTERLQGLQARLQEARERQAQADNHLRQAQAPLREAFQLESEARRLERTLAERQ ELHRQSNQRHAQQSDAARQLDMEQQRHVAEQAQLQAALRDSQALAALGDAWVTHQGQL ATFVQRRQRALESQAQLPELEKSLAHAGEPLERLQAQWTALHGSEPDDLAARLVELRR QTDSLERQQALHKEWQQVLDQRAGLARRLGELDQRMVEQEQALLDLKRQGSQCAEEVK AAEQALQVTRELLQRQRLARSASVEQLRAGLVDGEACPVCGSQEHPYHHSEQLLAALG EHDDQEQVRAEQSLERLRQTLVGLREGYSSQRERLNQSRQEQQELTGQLAALDRQLDQ WTLPEELRLLQPSAQLEWLAQRLDDLAGQRQQCQRDFDRLIARQRQTQQLQQELRAAE TILQQRQQALTEQRQRYEHLQQQVEEDSQQLRPLLSDEHWQRWQADPLRTFQALGESI EQRRQQQARLQQIEQRLQELKQRCDESSWQLKQSDEQRNEARQAEERAQAELAELNGR LGAHLGQHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQ RQQDEFQRLQADWQAWRERQDNLDDSRLDALLGLSEEQATQWREQLQRLQEEITRQQT LEAERQAQLLQHRRQRPETDREALEDNLRQQRERLAASEQAYLETYSQLQADNQRREQ SQALLAELERARAEFRRWGRLNELIGSSSGDKFRRIAQGYNLDLLVQHSNVQLRQLAR RYRLQRGGSELGLLVVDTEMGDELRSVYSLSGGETFLISLALALGLASMASSKLRIES LFIDEGFGSLDPESLQLAMDALDNLQAQGRKVAVISHVQEMHERIPVQVRVQREGNGM SSLKVVG" misc_feature 4795642..4799238 /locus_tag="PA4282" /note="exonuclease subunit SbcC; Provisional; Region: PRK10246" /db_xref="CDD:182330" gene complement(4799299..4801464) /gene="recD" /locus_tag="PA4283" /db_xref="GeneID:881652" CDS complement(4799299..4801464) /gene="recD" /locus_tag="PA4283" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease V subunit alpha" /protein_id="NP_252973.1" /db_xref="GeneID:881652" /translation="MNPTLKQLAGEVRDGRDDQVAQPLAARHDLLRQLDLWVARGWLR ALDRAFVAFLVELQPQADPRVLLAAALTSHQLGHGHVCLDLEATVGAPDAALSLPPEG DEGRDVLLPSQLLHGVRLDAWREALAASPLVEVVDERPGDPEPSETATSPLVLCAQRL YLRRYWRHELEIALALRERLGRQAPLAADLAPRLAALFAQAPTEDGQRVTDWQKLACA LAARGYFSLITGGPGTGKTTTVVRLLGLLQAPAVAAGQPLRIRLAAPTGKAAARLSES IGQQVRALPLAEDVLQAIPAEVTTLHRLLGSRPDTRHFRHHRDNPLALDVLVVDEASM IDLEMMASLLDALPPQARLILLGDKDQLASVEAGAVLGDLCRDAEEGWYSAETRAWLQ RVSGETWQGLREGSSQAHPLAQQTVMLRHSRRFGASSGIGRLARLVNRQQAGDARALL DSPPADLFDLRLRGERDAAFARLFVDGHPQAPGTPYGYRHYLQRLAEGRPAAGLALED GAWERWAQSVLTAFDAFRLLCALRRGPWGVEGLNQRVAAELLRLGLIEADHGWYEGRP VLVTRNDYSLGLMNGDIGIALRLPERNDDGSLRFALRVAFPRNDGSGGVRFVLPSRLV EVDTVFAMTVHKSQGSEFAHTALVLPDALNPVLTKELVYTGITRARDWFSLVESLPGV FEEAVRRKVRRLSGLMLHLRPEREEQPPHAPGEQTELPF" misc_feature complement(4799380..4801365) /gene="recD" /locus_tag="PA4283" /note="exodeoxyribonuclease V, alpha subunit; Region: recD; TIGR01447" /db_xref="CDD:273631" gene complement(4801461..4805198) /gene="recB" /locus_tag="PA4284" /db_xref="GeneID:881653" CDS complement(4801461..4805198) /gene="recB" /locus_tag="PA4284" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease V subunit beta" /protein_id="NP_252974.1" /db_xref="GeneID:881653" /translation="MSQQQMPVALDPLDFPLHGSRLIEASAGTGKTFTIALLYVRLVL DHGGENAFGRPLSPPEILVVTFTDAATQELRERIRSRLGEAARCFAEPQERHDGLLVA LRQQYPTERWPGCARLLRLAAEWMDEAAVSTIHSWCYRMLREHAFDSGSLFTQNLETD QSELLAEVVRDYWRRNFYGLTAPAAQAVASCYSGPEALGKALQPLLARQDADFRYADQ ALSAPESLAALLEQGGDWYRQLDQLDAQARAAWRAARVELEALLRDLRPYLNGNSYRG KDSDETFDAWLQALADWSEGGEQPANLGKFGQTRIKLTAKRVAPEHAALRAIDAWAAH QEERPDLAPHLLLHALGEVGHELEIEKQRRAEIGFDDLLSRLDRALQGPGGERLAQLI REQFPVALIDEFQDTDPVQYRIFERIYRIAADPDEPQARETGLFMIGDPKQAIYAFRG ADIHTYLRAREATRGRHYTLGKNFRSTAAMVAAANRCFAFAEEHPRGAFRFAREGLEN PVPFHAVDAQGRAERLLIDGAEAPAMTFWNLDVEAGVLGSAAYRQEMAERSASAIRRW LSLADLGRAGFADEQGGWRALRPADIAILVRGRAEAEAIRSALAARRLASVYLSDRDS VFDSQEAADLLHWLRACADPGADALLRVALATRSLHLDWATLERLNQDELFWERMVLR FRDYRRSWQAQGVLPMLRRLLADFELPARLLRHADGERSLTNLLHLAEWLQRAAVELD GEHALIRHLAEQVQSPGSEEILRLESDADLIKVVTIHKSKGLEYPLVLLPFICSWREL DGNSGAPASFHEDGAAGRVIELARRKEQAARAYEQANDERLGEDMRLLYVALTRARHS VWLGIAPLVASNSKSPELHKGALGYLLAGGATIGSDGLGQCLAALRGECREIVVEPAP EADAERYVAGRGQGLGQARETRRSSREKWWVASYSGLQLQASAGLDDDEVLESDESQE PISAEEATFHEEGRSAEQPPVAHASEMRDDLHRFPRGPAPGTFLHGLLEWAGREGFDV ARADAQRRRELVARRCDLRGWKDWAEPLDLWLEQYLAEPLRWPGGETSLAGLVAYQVE MEFWFATHQVQAEAIDALVRRHTLGGAARPALAPTLLNGMFKGFVDLVFEHQGRFYVA DYKSNWLGADDGAYSPEAMTAAVLENRYDLQYVLYLLALHRQLKARLPDYDYDRHMGG AVYLFLRGTRAATQGLHFERPPRELIERLDALFSGQPGAER" misc_feature complement(4801488..4805171) /gene="recB" /locus_tag="PA4284" /note="exodeoxyribonuclease V, beta subunit; Region: recB; TIGR00609" /db_xref="CDD:273172" gene complement(4805195..4808710) /gene="recC" /locus_tag="PA4285" /db_xref="GeneID:881634" CDS complement(4805195..4808710) /gene="recC" /locus_tag="PA4285" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease V subunit gamma" /protein_id="NP_252975.1" /db_xref="GeneID:881634" /translation="MPEPLGTTALTPGFMIVHGNRLDDLRDLAVSWMRRYPLAPLESE RVLVHSNGIAQWLKLALAEDPREDGGGGGGIAAALEVQLPAQFLWQAYRAVLGRESIP EVSELDKAPLTWRLMRLLPGLLERPEFRTLQRFLADDADLRKRHQLAERLADLFDQYQ VYRGDWLDDWSQGRDQLRTANGQARPLGADERWQAELWRALLADVGADSLARSRSGVH RRFIEALRSASAAPRALPRRVVVFGISSMPAQTLEALAALARFSQVLLCVHNPCRHHW ADIVADKDLLRHEYRRQQRRAGVPADLDEDRQHQHAQPLLAAWGKQGRDYINLLDSYD DPDSYRNLFGEVNGGRIDLFSEETPHGLLGQLQDDILELRPLAETREHWPPVAPRSDA SIRFHVAHSAQREVEILHDQLLARFNADPSLKPRDVIVMVPDINAYAPHIEAVFGQVP RDDQRFIPYTLADQGQRGREPLLIALEHLLKLPDSRFAVSEILDLLDVPALRRRFGVD EADLATLHRWIEGAGVRWGLDAAQRERLGLPAGLEGNSWRFGLRRMLLGYAVGEGAAL QGIQPYDEVGGLDAALAGPLAVLLERLEVAYAELAEPATPAQWGERLQALLTVFFEAH DERDELLLTQLLQLLERWQEHCACAAFAEPLPISVIREAWLGGLDQGGLNQRFLAGAV SFCTLMPMRAIPFRLVCLLGMNDGDYPRQQSPLDFDLMRNDYRPGDRSRREDDRYLLL EALLSAREQLYVSWVGRSIRDNGERPPSVLIGQLRDHLAAGWRLDPDGDGEALLRALT QEHPLQPFSRRYFHDAPEQGVDGLFTYAREWREVHREDEIGVPDAEAPLPPLELEGAL GLRALAEFLANPVNAFFQQRLKVRFDDEQLTGNDEEPFELDALDNWKLQFELTERMKR WVERDWDAEGLPVQLQAQVERLRRQGRLPLAAFGEFSARHLLQPLPDLLWRYRQEIER WPEAVEQQQELRHRHPSGLELEDWLGGLRRDASGRLARLQLLSGKLHEGRSFKWHSLV RHWLQHLALQRLGQPVSSVLVSQTGTLEIPPLPSERASEYLDQLIDAWRQGMRQPLPL ACRTAFAWLASGGAAEPEKAMREARKRYEGGFGMGGEVDASPALARVYPDFDRLLASG EFAHWAEQLYAPLLAALGRGAEEQA" misc_feature complement(4805324..4808671) /gene="recC" /locus_tag="PA4285" /note="exodeoxyribonuclease V, gamma subunit; Region: recC; TIGR01450" /db_xref="CDD:273633" gene complement(4808751..4809434) /locus_tag="PA4286" /db_xref="GeneID:881635" CDS complement(4808751..4809434) /locus_tag="PA4286" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252976.1" /db_xref="GeneID:881635" /translation="MVEVFSVQDGLDAERALLDEVCGGAREHGLLLWQPCDRALVMPR RMERLEGFAPASAAVAERGWPVLLRDTGGEPVPQSPGVLNIALSYALGPGDNEQTRIE TAYLRLCQPICDWLRERGLDAGVGAVAGSFCDGRYNVTLDGRKLAGTAQRWRRNGAGR PVVLAHAALLVGAEREEMVEVVNTFTRRCASAPDCQADSHLGLSERWSDFRMADSLEL ERRFVAARS" misc_feature complement(<4808880..4809404) /locus_tag="PA4286" /note="Lipoate-protein ligase A [Coenzyme transport and metabolism]; Region: LplA; COG0095" /db_xref="CDD:439865" gene complement(4809547..4810437) /locus_tag="PA4287" /db_xref="GeneID:881640" CDS complement(4809547..4810437) /locus_tag="PA4287" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252977.1" /db_xref="GeneID:881640" /translation="MQYLFPLLAVFIWAGNTVVNKLAVGIIQPAEIGFFRWLLVGLAL TPFMLGPVLRNRRYILANLGKFVVLGLLGMAVYQSLAYYAAALTSATNMGIILSLMPL MSLGLASSILAHRLNAGALLGALVSLAGVVLVISQGHLGALLEHGVNLGDAMMIVATL AYAVYSVLLKKWSLKLPAMQLLYLQVLVAILALLPLYLLSPRTGLNAANLPLVLYAAL FASIVAALAWMHGVARLGPSRMALFFNLLPIITACIATLVLGERLTVHHLVGGALTLA GVLLAEFWQRRPARLRSATC" misc_feature complement(4809568..4810431) /locus_tag="PA4287" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene 4810538..4811341 /locus_tag="PA4288" /db_xref="GeneID:881641" CDS 4810538..4811341 /locus_tag="PA4288" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_252978.1" /db_xref="GeneID:881641" /translation="MSTTTLLRLPDLQGQSFDVYFRYDEFGADTHSPPHTHAWGQLNY AAHGVMQLEIDGQRFLSPPQYAVWIPPERVHSCYNSQAIVYRSLYLSAELSRRLPATP CTLAISAILKAILSDFAERGVNLPTSAQDLRLARVVMDQLECAQPHDDYLPYGRTPAL REVLDALQAEPGDNRSLAQWAQQVHSTERTLARHCQRELGMTFGEWRQRLRFLAAIEA LEAGRGIQQIAFDLGYSSPSAFISMFRRLAGTTPEQYRLASRAQDMPML" misc_feature 4810592..4810876 /locus_tag="PA4288" /note="AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain; Region: cupin_NimR-like_N; cd06124" /db_xref="CDD:380379" misc_feature 4811075..4811305 /locus_tag="PA4288" /note="Helix-turn-helix domain; Region: HTH_18; pfam12833" /db_xref="CDD:432818" gene 4811396..4812601 /locus_tag="PA4289" /db_xref="GeneID:881647" CDS 4811396..4812601 /locus_tag="PA4289" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_252979.1" /db_xref="GeneID:881647" /translation="MPTASRHPDTALAVFLAFLKLGCSAFGGPIAHLGYFRDEFVRRR GWLSESSYADLVALCQFLPGPASSQVGMALGLARAGYPGALAAWLGFTLPSALLLVLF ALGLGRWGALLPEGVLHGLKIAAVAVVAQAVWGMGRSLCPDRPRLTLMALSCASVLAW PTAWTQVAVIAGAGLAGLALLKTEAVEGHERLPIDIGYRGALLFLTLFAVLLVCLPLA ARLWPEHWLRLLDAFYRAGSLVFGGGHVVLPLLQAEVVPKGWVDGDTFLAGYAAAQAV PGPLFTFAAFLGAASGPAPNGWSGALLCLLAIFLPSFLLVAGALPFWERLRHERRVRA TLAGVNAAVVGLLLAALYQPLWTEGILRPADFALLLFALLALLAWKTPPWQVVLACAV AGGLIATAG" misc_feature 4811447..4812577 /locus_tag="PA4289" /note="chromate transporter, chromate ion transporter (CHR) family; Region: 2A51; TIGR00937" /db_xref="CDD:273350" gene complement(4812598..4814214) /locus_tag="PA4290" /db_xref="GeneID:881648" CDS complement(4812598..4814214) /locus_tag="PA4290" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_252980.1" /db_xref="GeneID:881648" /translation="MQPARSRILFVCLLQSLALVLLLVGARHGWLPLYLALPLGVALL WLPWLLPGNRTAVATVGEPDIARLARDLSHNTSQNALSAAGVAFSVKRLAEKLQSQLD AAEQIVGSAEVMIHTERATSNLARQAMDAATRARAGSDEGQVLLASTIERMHRLSERM GASREAIEALNQRSEDIQRVTLVIQGIASQTNLLALNAAIEAARAGEHGRGFAVVAEE VRGLAGRTAEATEEVGQMVAEIQRQTSEVVEQIRQLSEELGEGVGQVELTGRQLEGIA ELAAGVESQITEIAQGAEINRSQLASLFAAVEQVRGDLSASEEQTLRLGEAASQLENQ AEVISERLAEVSLDAYHQSVYDLAREGAAAIAARFEEDVRSGRIDLDDLFDRSYQPLP NTQPTKYRTRFDSYTDQVLPGIQEQLLERNRNLVFAIACTPEGYVPTHNRAFAHPPSG DPQTDALRSRSKRLFNDRTGIRCGSHQQPLLLQTYTRDTGELMHDLSVPIFVHGKHWG GLRLGYRPEGAEPGKAAAPTAQGLSLALNG" misc_feature complement(4813177..>4814022) /locus_tag="PA4290" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene 4814213..4814899 /locus_tag="PA4291" /db_xref="GeneID:881582" CDS 4814213..4814899 /locus_tag="PA4291" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252981.1" /db_xref="GeneID:881582" /translation="MSKSPASGALRHDPGVGRATAGLLYLTCSPVCSPPPEAPPSFLS GMANGWHSTSAGRDERRRTPRTRRPGLDPWGLRRISRGRSKNFRPAVRRPTPYDKPGA HVIIPRPFTAGSGRLDSQPALAGPRFRPAWSLSGPLFLDSGPPVTKDELRAALAREEQ RYKDVYGGEVTLYAAQPEPDRKPWRKRPTVQEQAFDRELQKIEEERLKAGQEAANPIP FTSNRQESDG" gene 4815043..4816512 /locus_tag="PA4292" /db_xref="GeneID:881583" CDS 4815043..4816512 /locus_tag="PA4292" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phosphate transporter" /protein_id="NP_252982.1" /db_xref="GeneID:881583" /translation="MFDLFSGLDAWVGISLVLALAFVLTFEFINGFHDTANAVATVIY TKAMSPYRAVMLSGVFNFLGVLLGGVGVAYAIVHLLPVELLINVNTGHGLAMVFSLLA AAIAWNLGTWYFGIPASSSHTLIGSILGVGLANALITDVPLAEGINWQKAIDIGLSLI FSPLAGFMVAALVLLGLKWWRPLSKMHKTPETRRELDEKKHPPFWNRLVLVLSAMAVS FVHGSNDGQKGIGLIMLVLIGIVPAKFVLDLNSTTYQIERTRDAALHLSQFYQRHTDT LGDMLALGKSNGSEMPQFYRCDPKQTEPTINALLRDLRGVPSYNDLDADERVQVRRYL LCLDDTAKKVGKLSDLPAREKADLEKLRKDLTATTEYAPFWVIIAVALALGIGTMVGW KRVVLTVGEKIGKQGMTYAQGMSAQITAAAAIGMANIYSLPVSTTHVLSSGVAGTMVA NKSGLHGGTVRNILMAWVLTLPTSMALSAGLFWLASQFI" misc_feature 4815043..4816509 /locus_tag="PA4292" /note="Phosphate transporter family; Region: PHO4; cl27575" /db_xref="CDD:474944" protein_bind complement(4815881..4815893) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4292" /bound_moiety="AmrZ" gene complement(4816580..4819348) /gene="pprA" /locus_tag="PA4293" /db_xref="GeneID:881624" CDS complement(4816580..4819348) /gene="pprA" /locus_tag="PA4293" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="two-component sensor PprA" /protein_id="NP_252983.1" /db_xref="GeneID:881624" /translation="MFEFSRSSSAEAERPEPFSQEGPALWSASLRSWDLCFEMDEQDR VIRVGGRQAYRLQCAHGLGEQPRPFAEYLERRAPGAPTLAGLRRGERLDLTLRSDAAA PLTCRFQPMQPLDGLGRSLLLGMDISDLNWQSDSQQHQLQSLSLGKLILSRLRHVSHG HLAEAVQEILESLSGAFQMQAIALLLGDGKGFCTVFASHVRPGSDSLLRPPLQLADDD LREGAGARLLRRGEGASTLLRQIGEDALYLVPATMRGGRLGALLVRPMSLEQLAQGPA PQDWQYLAELLANQVADRCELHEQHDSSRKLGLLQEMIGGGWWRYWAEQELFELAPAL HDSLGLTGEYRRVPLEHLQGLLQPADADELGLRLRASLRSGQALAQDLCLRQPDSRGE RRWLRIEGRPLGRGSALGLSGVLLDISEGRRQEERAQAAHARLRSLIDSAPVVIYVQR VEQGHLVPEFYSESASNLLGLDLQGQSWQALAERVHPDDLEAFFARGRELLREGRVKT RYRLADGQGNWHWLYDEAKLLRDAQGLPSEAVGLWLDVTEQHLAAQRIAESEERYRVL VEDSPALICRYTADLVLTYVNRTFADSLATSPERLVGRRLDEWLAAEDASALRARLLG SPREGASEVPELRFNLPGQRFLWLVWAERPLFDARGELCEVQAVGRDNTPVRRAQQQL AQGAKMASLGEMVSGLAHEVKQPLHVLRMTLFNMRQRMNSVGLDGDYLGEKLERMDAQ VLRVDRLVSHLGVFSRKSALEALPFDPYAAFEGALGLLGEGLRQHAIEVECPAPTQRM VVRGQADQLEQVIINLLANARDALLGNPGLASRRVRLEQVACREPGWVELHVHDNGGG IEPLLLERIFEPFFTTKAEGKGTGLGLSVSHDLVRNMGGSLTAANQGEGALFVVRLPL AAPAEAGG" misc_feature complement(4817681..4818463) /gene="pprA" /locus_tag="PA4293" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature complement(4816604..4817698) /gene="pprA" /locus_tag="PA4293" /note="Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]; Region: COG4191" /db_xref="CDD:443345" gene complement(4819358..4819864) /locus_tag="PA4294" /db_xref="GeneID:881625" CDS complement(4819358..4819864) /locus_tag="PA4294" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252984.1" /db_xref="GeneID:881625" /translation="MTTSIKDADRGCQLMLGKAFRRRQHGAVAIEFTAIFLLFFALVY GLISYSIPLLMLQSFNDAAAVGARAAIAVDPSDAGYESLAEARARDELLARLDWMPAA WRANLQPCAGNGQYADYVSATSRIEVCVQYPYGDPGKAIIPVLSFPGIGAIPNLPQTL KASANLLL" misc_feature complement(<4819712..4819813) /locus_tag="PA4294" /note="Flp pilus assembly protein TadG, includes N-terminal TadE domain [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: TadG; COG4961" /db_xref="CDD:443987" gene 4819928..4820410 /gene="fppA" /locus_tag="PA4295" /db_xref="GeneID:881657" CDS 4819928..4820410 /gene="fppA" /locus_tag="PA4295" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="Flp prepilin peptidase FppA" /protein_id="NP_252985.1" /db_xref="GeneID:881657" /translation="MEQLALALWASVCGYQDIKRLRVSNWLILGGFLISFVYLYVKES SLTGATVNMAMTALFIGVCLSLPGYLLGRLGAADVKYLAALGLASDPLTVLYSLAFGC LLCIALFILVKLFKRSVEKSAMNEEVRLRRAPSKNKSFPFIFAMGAGLLAHLIINKII " misc_feature 4819937..4820407 /gene="fppA" /locus_tag="PA4295" /note="Flp pilus assembly protein, peptidase CpaA [Posttranslational modification, protein turnover, chaperones, Signal transduction mechanisms]; Region: CpaA; COG4960" /db_xref="CDD:443986" gene 4820532..4821359 /gene="pprB" /locus_tag="PA4296" /db_xref="GeneID:881658" CDS 4820532..4821359 /gene="pprB" /locus_tag="PA4296" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="two-component response regulator PprB" /protein_id="NP_252986.1" /db_xref="GeneID:881658" /translation="MDKPASRHFSVLIIDDEPQVTSELRELLENSGYRCVTSTHRESA IASFQADPNIGLVICDLYLGQDNGIRLIESLKEVAGNGRFFESIILTGHDGRQEVIEA MRVGAADYYQKPVAPQELLHGLERLESRLHERVRSQLSLSHVNQRLEYLAESLNSIYR DIHKIKYEVHGNSQPSALRSEDSQPSAPPAPVAESQVSPSNPLFGKLSPRQQAVARLV SKGLTNYQIAYELGITENTVKLYVSQVLRLMHMHNRTQLALALSPAAMQQGSGAVVH" misc_feature 4820562..4821305 /gene="pprB" /locus_tag="PA4296" /note="DNA-binding response regulator, FixJ family, consists of REC and HTH domains [Signal transduction mechanisms, Transcription]; Region: FixJ; COG4566" /db_xref="CDD:443623" gene complement(4821385..4823055) /gene="tadG" /locus_tag="PA4297" /db_xref="GeneID:881605" CDS complement(4821385..4823055) /gene="tadG" /locus_tag="PA4297" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252987.1" /db_xref="GeneID:881605" /translation="MNGWPARQRGAIGILAATTLLLALICLLLVVDTGRLYLEQRNLQ RVADVAALESASQGALCGDQSSAQATSFAKASAMLNGFDADAAGSSLSAEVGGVLSAG GLRSFIASASNAAVANEAVHVEVTKSVPGSLVANLGGLFGGGNANVDLRAEAVARRLP NATISAGTGLASVNSGQSALLNPILSGLLGTHIDLSAAAYNGIADAKLSVLDILGADG MGLIGVDTSLGTIEQLLNTNVGLQQVLAASVNVLAKNGVASVEALRAQLVGVKSATLK LGDLLGLSAGEVNSMSQLDTAINALDLIMAVAQVANKNSAVAVNLGIPGLANARLTVV EPKRIVSGPPGQDESGAWRTEVRQSQVRLTADIDSGFLSILATTKLQLAIEGASGAVW LKSMACTRPDTALDFGWRSSGATIKIGSPANIDQVGSILVLGGLVRLDLKLDTSIAGS SGDTRFNVKADGSDLVQSRRLPESGFLASTLKTSINVNPVVLGLCLPLLCGSTALTDL IVNSVVAPLVDGLLTPILNLVLPLLGVQLGYIDAEILKVDVGRAELLI" misc_feature complement(4821388..4823046) /gene="tadG" /locus_tag="PA4297" /note="Uncharacterized conserved protein, contains TadX/Tad_C domain [General function prediction only]; Region: TadX; COG4655" /db_xref="CDD:443693" gene complement(4823080..4823364) /locus_tag="PA4298" /db_xref="GeneID:881606" CDS complement(4823080..4823364) /locus_tag="PA4298" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252988.1" /db_xref="GeneID:881606" /translation="MHERILFGVLLLLSGTAWAADTPAVRPAAPATAEPQTATRAWLA IQASGRAASPVRQSATAAERQRAYQRYLKSYEHEIPEYLLEDRGFGESKN" misc_feature complement(4823104..4823304) /locus_tag="PA4298" /note="Protein of unknown function (DUF3613); Region: DUF3613; pfam12266" /db_xref="CDD:432438" gene complement(4823387..4824124) /gene="tadD" /locus_tag="PA4299" /db_xref="GeneID:881552" CDS complement(4823387..4824124) /gene="tadD" /locus_tag="PA4299" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="type II secretion system protein TadD" /protein_id="NP_252989.1" /db_xref="GeneID:881552" /translation="MKALIGIGLCAALLGGCAALPGRDGPRECSQQLGQEQELQMNMV RDMIREGRLHAALANLESMPPGLLDVREERALILRRIGDPRARAEYQALLETCKAPEA HHGLGLLALRNGDSARAVLELREAARLRPTESRFRNDLGVALLKRGDRVGARFEFITA LELQQGGKLPATNLLGLLYLQGDREDAQRLIERLQLDARDIRAAEARARSWGAVPTPG AAPASDDPLAELPAEANMHTAMANEAP" misc_feature complement(<4823498..>4823962) /gene="tadD" /locus_tag="PA4299" /note="Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis]; Region: LapB; COG2956" /db_xref="CDD:442196" misc_feature complement(4823741..4823827) /gene="tadD" /locus_tag="PA4299" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(order(4823585..4823587,4823594..4823599, 4823606..4823611,4823618..4823620,4823687..4823692, 4823696..4823701,4823708..4823713,4823720..4823722, 4823792..4823794,4823798..4823803,4823810..4823815, 4823822..4823824)) /gene="tadD" /locus_tag="PA4299" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature complement(4823636..4823728) /gene="tadD" /locus_tag="PA4299" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(4823546..4823623) /gene="tadD" /locus_tag="PA4299" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" gene complement(4824121..4825032) /gene="tadC" /locus_tag="PA4300" /db_xref="GeneID:881553" CDS complement(4824121..4825032) /gene="tadC" /locus_tag="PA4300" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="type II secretion system protein TadC" /protein_id="NP_252990.1" /db_xref="GeneID:881553" /translation="MQAQWLIFAALLMAVGGALLLLLQARNGSREQRLIERRLGALAN PGGSTRWLAGMTERMDDSFWVRRLQLMDSEARQLLQQAGWHESRYRTLYLISVFLTPL LFVLLVLLVKLLRAESEASYAVPLLFAAGIGFLLPKQVLKHFAKARRALIADEMILFV QLIRILFDAGLTVEQTLRVVCLEGRGITPQLARELDLALTRADNGIDLAEELEALARR LQVDPLNDCCGVLRQMLRQGGSARSTLLTLKQLFEDRRLTTLQERIGKLSAKMSLVMM VLLFPALLIVLAGPGVIAITKALGGLG" misc_feature complement(4824148..4824681) /gene="tadC" /locus_tag="PA4300" /note="Flp pilus assembly protein TadC [Extracellular structures]; Region: TadC; COG2064" /db_xref="CDD:441667" protein_bind 4824986..4824998 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="'Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4300, PA4297'" /bound_moiety="AmrZ" gene complement(4825042..4825926) /gene="tadB" /locus_tag="PA4301" /db_xref="GeneID:881596" CDS complement(4825042..4825926) /gene="tadB" /locus_tag="PA4301" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="type II secretion system protein TadB" /protein_id="NP_252991.1" /db_xref="GeneID:881596" /translation="MNGAQLLVLFSGVLAFAALALAFMGWRAGRNELVVERLLGRQEA VAVRPRSSHWLARQMRRAGIQRPRPWLFGAAVLALLLVWSGLGLFGTIGALGGLLLAA LSCRVALGMLYQRRLKRMIRQMPRFLDQVVRSLHAGRTLGDALMQAVENAEEPLRDIF TLARNHVLLGIHLPEALQEVAELYEVEELRILALGVSVNHRYGGNTSDLLDSIVKLIH EREKLSRQLHAMTGETRISAYVLAGVPSALGGYILASNPGYLLNMWADGTGRFLLLAS LGLQLLGCYALWRMLKSV" misc_feature complement(4825051..4825719) /gene="tadB" /locus_tag="PA4301" /note="Flp pilus assembly protein TadB [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: TadB; COG4965" /db_xref="CDD:443991" gene complement(4825923..4827188) /gene="tadA" /locus_tag="PA4302" /db_xref="GeneID:881597" CDS complement(4825923..4827188) /gene="tadA" /locus_tag="PA4302" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="ATPase TadA" /protein_id="NP_252992.1" /db_xref="GeneID:881597" /translation="MSTGFGARPDGGAFHSRQEQDIQALKLRLHRYIIDEIDEDGMNL LEGARSAVVQYVSEKVCEYGSRHQLAISRYELDRLAEEVVDELTGFGPLEILLRDPGV SEILVNGPGRVFVEREGRLYQSDLRFIDDHHVLRVIQRILAPLGRRLDESSPMVDARL PDGSRVNAIIPPVALDGPCISIRKFSQELLRSADLLAYQSVDEALLEFLRQAVSRRCN ILISGGTGTGKTTLLNVISGFIDERERIVTIEDTAELQLGHDHVVRLETRPPNAEGYG EVTARDLIRNALRMRPDRIILGEIRGVEVLDVLQAMNTGHDGSMSTVHANSAMDSLLR MEMLVGLTGNRLPEQTLRLMICAALDVVVQITRLASGRRCISEVLEVLEVRDGVYVTN TLFSLDRRGSGQFVRQAAPVGQKFRQALL" misc_feature complement(4825932..4827122) /gene="tadA" /locus_tag="PA4302" /note="Pilus assembly protein, ATPase of CpaF family [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: CpaF; COG4962" /db_xref="CDD:443988" gene complement(4827185..4828369) /gene="tadZ" /locus_tag="PA4303" /db_xref="GeneID:881617" CDS complement(4827185..4828369) /gene="tadZ" /locus_tag="PA4303" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252993.1" /db_xref="GeneID:881617" /translation="MNQNFVALTQHPGELDWLQNSLASAGQVVPAGSASLEELLALLD VTAAGVLFISLGKSNLVSQGALVEGLVSARPMLSVVAIGDGLDNQLVLAAMRAGARDF ITYGARASELTGLIRRLGGRLPSVPVSAARQGELLTLVSARPDADGAFVALHLAKALQ EQTPNQVLLLDVGQPTGEALAILGLDSAFTFSDALRNLRRLDQTLIDSAFTRLDSGLR ILSLTDEPGVLERVTTAELYLLLGNLRGAFSHVVVNLTGLPEGELSNQLLVQANRVLW MVDQSVPSCKKGLERLRRLRERNLPLPSIELLIERYLPNVAPDQQALSRMFDLDLFGV LPLSPESRLRAKNLGKSLFEVAPRDPLAAKLRQLADSLCVTRGERRSLLSWLGRAKAA LL" misc_feature complement(4827980..4828366) /gene="tadZ" /locus_tag="PA4303" /note="Pilus assembly protein TadZ N-terminal; Region: TadZ_N; pfam16968" /db_xref="CDD:407181" misc_feature complement(4827200..4828105) /gene="tadZ" /locus_tag="PA4303" /note="Flp pilus assembly ATPase CpaE/TadZ, contains N-terminal REC/TadZ_N domain [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: CpaE; COG4963" /db_xref="CDD:443989" gene complement(4828379..4829629) /gene="rcpA" /locus_tag="PA4304" /db_xref="GeneID:881618" CDS complement(4828379..4829629) /gene="rcpA" /locus_tag="PA4304" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="type II/III secretion system protein" /protein_id="NP_252994.1" /db_xref="GeneID:881618" /translation="MHRSTGIGVSRWLGGLLGVALALPALALPQGCIELLAQAPRVDV VQGQQRDLRLAVPIERLAIGDPKIADVQLLDRRGFLVTGKEQGSTSLLIWTGCSPEPL RSLVEVEGRGSVDTRGAPAFTVGAAEELPNQVQTDIRFVEVSRSKLKQASTSFVRRGG NLWVLGAPGSLGDIKVNADGSGLGGTFGTGSSGFNLIFGGGKWLSFMNALEGSGFAYT LARPSLVAMSGQSASFLAGGEFPIPVPNGTNDNVTIEYKEFGIRLTLTPTVMNNRRIA LKVAPEVSELDYSAGIQSGGVAVPALRVRRTDTSVMLADGESFVISGLTSSNSVSNVD KFPWLGDIPILGAFFRSTKLDKDDRELLMIVTPHLVQPLAADAQLPDLPGEGLRHYDP GFSRLYFLERGEYDGQQNDTGLSD" misc_feature complement(4828418..4829629) /gene="rcpA" /locus_tag="PA4304" /note="Flp pilus assembly protein, secretin CpaC [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: CpaC; COG4964" /db_xref="CDD:443990" gene complement(4829643..4830554) /gene="rcpC" /locus_tag="PA4305" /db_xref="GeneID:881571" CDS complement(4829643..4830554) /gene="rcpC" /locus_tag="PA4305" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252995.1" /db_xref="GeneID:881571" /translation="MNSKVLMALAGLLLLGAVLLGYLGVSIGRAPSNAHAPSVAPASA TVDASLEKLERKPVLVASRDLPALAVIGRDDLSVELLRTAPVGSYDRPEALLGKRVWV AVPAGSILSAATLEPGGPLARTIRPDERAMAIAVDEVVGGGGFVLPGDYVDVMLFVRD ERDGESTPLAQLVLPGVRVLTYGERIAVGSDGQDRSNQEKDPRPPRTAVLAVPEDGVA RLMLASQAGSLRLAIRSKDEELYRREQEGALLQASLGAPSAALSLDQLLERRKPTAPS VRSAAPRVPVANGVTVYRGSAMTHEAP" misc_feature complement(4829652..4830434) /gene="rcpC" /locus_tag="PA4305" /note="Flp pilus assembly protein CpaB; Region: pilus_cpaB; TIGR03177" /db_xref="CDD:274472" protein_bind 4830568..4830583 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA4306" /bound_moiety="LasR" protein_bind 4830883..4830895 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4306" /bound_moiety="AmrZ" gene 4830964..4831182 /gene="flp" /locus_tag="PA4306" /db_xref="GeneID:881572" CDS 4830964..4831182 /gene="flp" /locus_tag="PA4306" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="type IVb pilin Flp" /protein_id="NP_252996.1" /db_xref="GeneID:881572" /translation="MKNLTLFVYCKVRAFLADEEGANAIEYAVIAGLIAVALIAVLSP TDSGIVGGLKAFFDGVGEKVGGLAPTAN" misc_feature 4830994..4831170 /gene="flp" /locus_tag="PA4306" /note="Flp pilus assembly protein, pilin Flp [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: Flp; COG3847" /db_xref="CDD:443057" protein_bind complement(4831249..4831261) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4307" /bound_moiety="AmrZ" gene 4831372..4833270 /gene="pctC" /locus_tag="PA4307" /db_xref="GeneID:881576" CDS 4831372..4833270 /gene="pctC" /locus_tag="PA4307" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="chemotactic transducer PctC" /protein_id="NP_252997.1" /db_xref="GeneID:881576" /translation="MLRSLSFAKKILLAAALVVVFAFSCFILYNDYRQREAVRTDTEN YLGEIGTLTASNIQSWLEGRMHLVEGLASQLALLDQPDEANIARQLEQPVFSRNFASV YLGEAASGTFTMRPYDAMPEGYDPRTRAWYKDALAADRLIVTEPFVDAGTGEQILAMS LPVRHAGQLLGVAAGDMKLETLTAILNSLKFDGAGYAFLVSDAGKILLHPDSGLVLKT LAEAYPKGAPNIVPGVHEVELDGSSQFVSFTPVKGLPGVTWYVALVLDRDTAYSMLSE FRTSAIVATLIAVVGIMLLLGMLIRVLMQPLTDMGRAMQDIAQGEGDLTKRLKVTSND EFGTLANAFNRFVERIHESIREVAGTARQLHDVAQLVVNASNSSMANSDEQSNRTNSV AAAINELGAAAQEIARNAADASHHASDANHQAEDGKQVVEQTIRAMNELSEKISASCA NIEALNSRTVNIGQILEVIKGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLA HRAQESAQQIQKMIEELQVGAREAVATMTESQRYSLESVEIANRAGERLGSVTSRIGE IDSMNQSVATATEEQTAVVDSLNMDITEINTLNQEGVENLQATLRACGELETQAGRLR HLVDSFKI" misc_feature 4831549..4831908 /gene="pctC" /locus_tag="PA4307" /note="first PDC (PhoQ/DcuS/CitA) domain of methyl-accepting chemotaxis proteins and similar domains; Region: PDC1_MCP_like; cd12913" /db_xref="CDD:350338" misc_feature 4831750..4833267 /gene="pctC" /locus_tag="PA4307" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene complement(4833374..4834864) /locus_tag="PA4308" /db_xref="GeneID:881577" CDS complement(4833374..4834864) /locus_tag="PA4308" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_252998.1" /db_xref="GeneID:881577" /translation="MSQANELLIGAGPDGQPVGQAWRLANRHGLIAGATGTGKTVTLQ HLAESFSDAGVAVFAADIKGDLCGIAAPGNPQGKVAERIASMPWLNYQPKAYPTTLWD IAGKTGHPLRTTISEMGPLLLANLLELTDSQQAALFAAFQVADREGLLLLDLKDLKAL LNHLKDNPEILGEDRALFTGASGQALLRRLATLEQQGAEAFFGEPALQLEDILRPEPD GRGRIHLLDASRLVHEAPKVYATFLLWLLAELFEQLPERGDADKPVLALFFDEAHLLF NGTPKALRDRLEQVVRLIRSKGVGVYFVTQSPGDLPDDVLAQLGLRIQHGLRAFTAKE QKSLRAVADGFRPNPAFDTLGVLTELGIGEALVGTLEEKGTPAMVQRVAVAPPYSRIG PLSDSERAELVQRSPLKGRYDQPIDRESAYEVLANKAGAKPEVQGQATAQQESSSGVG GMAGQILGSLLSNSTVKSAMRQAANQLSRELVRGLLGSLMGGKKRR" misc_feature complement(4833380..4834849) /locus_tag="PA4308" /note="Helicase HerA-like C-terminal; Region: HerA_C; pfam05872" /db_xref="CDD:428657" gene 4835264..4837153 /gene="pctA" /locus_tag="PA4309" /db_xref="GeneID:881565" CDS 4835264..4837153 /gene="pctA" /locus_tag="PA4309" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="chemotactic transducer PctA" /protein_id="NP_252999.1" /db_xref="GeneID:881565" /translation="MIKSLKFSHKILLAASLVVFAAFALFTLYNDYLQRNAIREDLES YLREMGDVTSSNIQNWLGGRLLLVEQTAQTLARDHSPETVSALLEQPALTSTFSFTYL GQQDGVFTMRPDSPMPAGYDPRSRPWYKDAVAAGGLTLTEPYVDAATQELIITAATPV KAAGNTLGVVGGDLSLKTLVQIINSLDFSGMGYAFLVSGDGKILVHPDKEQVMKTLSE VYPQNTPKIATGFSEAELHGHTRILAFTPIKGLPSVTWYLALSIDKDKAYAMLSKFRV SAIAAALISIVAILVLLGLLIRLLMQPLHLMGRAMQDIAQGEGDLTKRLAVTSRDEFG VLGDAFNQFVERIHRSIREVAGTAHKLHDVSQLVVNASNSSMANSDEQSNRTNSVAAA INELGAAAQEIARNAADASHHASDANHQAEDGKQVVEQTIRAMNELSEKISASCANIE ALNSRTVNIGQILEVIKGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRA QESAQQIQKMIEELQVGAREAVATMTESQRYSLESVEIANRAGESLSSVTRRIGEIDG MNQSVATATEEQTAVVDSLNMDITEINTLNQEGVENLQATLRACGELETQAGRLRQLV DSFKI" misc_feature 4835369..4836046 /gene="pctA" /locus_tag="PA4309" /note="Cache domain; Region: dCache_1; pfam02743" /db_xref="CDD:460673" misc_feature <4836038..4837150 /gene="pctA" /locus_tag="PA4309" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene 4837390..4839279 /gene="pctB" /locus_tag="PA4310" /db_xref="GeneID:881566" CDS 4837390..4839279 /gene="pctB" /locus_tag="PA4310" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="chemotactic transducer PctB" /protein_id="NP_253000.1" /db_xref="GeneID:881566" /translation="MIKSLKFSHKILLAAALVVIATFSLFTLYNDSLQRASIREDLED YLHEMGEITASNVQNWLSGRILLIENLAQTLARDHSPETTQALLEQPLLGSTFLFTYL GQTDGTYTARPTSDLPADYDPRRRPWYNAATSAGQTTLTEPYMEPAIHELVLTIASPA RQGGQPFGVVGGDLSLQTVVKIINSLDFGGMGYAFLVSGDGKILVHPDKDQVMKSLSD VYPRNTPKIGSGFSEAELHGNTRILSFSPVKGLSGLDWYIGISVDKDKAYAMLTKLRT SAIVAALIAVVAIVLLLGMLIRVLMQPLTDMGRAMQDIAQGEGDLTKRLKVTSNDEFG ALAISFNRFVERIHESIREVAGTARQLHDVAQLVVNASNSSMANSDEQSNRTNSVAAA INELGAAAQEIARNAADASHHASDANHQAEDGKQVVEQTIRAMNELSEKISASCANIE ALNSRTVNIGQILEVIKGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRA QESAQQIQKMIEELQIGAQEAVSTMTESQRYSLESVEIANRAGERLSSVTGRIAEIDG MNQSVATATEEQTAVVDSLNMDITEINTLNQEGVENLQATLRACGELETQAGRLRQLV DSFKI" misc_feature 4837498..4838172 /gene="pctB" /locus_tag="PA4310" /note="Cache domain; Region: dCache_1; pfam02743" /db_xref="CDD:460673" misc_feature 4837921..4838184 /gene="pctB" /locus_tag="PA4310" /note="second PDC (PhoQ/DcuS/CitA) domain of methyl-accepting chemotaxis proteins and similar domains; Region: PDC2_MCP_like; cd12912" /db_xref="CDD:350337" misc_feature <4838161..4839276 /gene="pctB" /locus_tag="PA4310" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene 4839597..4840712 /locus_tag="PA4311" /db_xref="GeneID:881589" CDS 4839597..4840712 /locus_tag="PA4311" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253001.1" /db_xref="GeneID:881589" /translation="MHIADMTMFYAPASGGVRTYLEAKHRHLWHYPGIRHSVLVPGAS YRQANGIHEVPAPPLPFGNGYRFPLRRGPWRKVLRNLQPDLIEVGDPYLTAWAALDAR RRLDVPVIGFYHSDLPLLVSNRMGAWLGTNADNYVSKLYGHFDRVLAPSRVMAEKLMR LGVADVHVQPLGVDLVTFHPSNRDPGLRQELGLDEETRLLVFAGRGSREKNLPVLLDA IQRLGDGYHLLLVGSNMPTRVPRNTSVVDHFCDSREVARLLASSDALLHAGDQETFGL VALEAMASGIPVVAVRAGALAEIVPERCGVLCAPNNGDAMACAVRELFSHDVELRGQR ARRHVERQHAWDAVVAGLLLHYHAVLGDSEARFPRYG" misc_feature 4839600..4840667 /locus_tag="PA4311" /note="glycosyltransferase family 4 proteins; Region: GT4-like; cd03814" /db_xref="CDD:340842" gene 4840705..4841466 /locus_tag="PA4312" /db_xref="GeneID:881590" CDS 4840705..4841466 /locus_tag="PA4312" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253002.1" /db_xref="GeneID:881590" /translation="MAERSLLLVLHDVAPETWPDYRPFVEAVDALGQVPMTWLVVPDF HHRNPLEADEKFCELLSRRVDRGDELALHGFYHYDDAPPPRTPGQYFMRRIYTWEGEF YALDHAEAKARLAAGIELFRRRGWPLHGFVAPAWLMSAGTRQALGESGLRYTSDPSNL YRLPHLQPIEAPGLVWSARSAWRRGLSWALSEQRRRAWRAAPVIRLGLHPVDMRHRFS REYWLRTLRTLLSEGRQPLTKIDWLERRLALDHAA" misc_feature 4840705..4841448 /locus_tag="PA4312" /note="Predicted deacetylase [General function prediction only]; Region: COG3233" /db_xref="CDD:442465" gene 4841463..4842464 /locus_tag="PA4313" /db_xref="GeneID:881556" CDS 4841463..4842464 /locus_tag="PA4313" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253003.1" /db_xref="GeneID:881556" /translation="MSRGWLLLFGLIGASLIPLVLGGSDMFSRLRAFPLDSLLLMFGM IVVCWFINGLRLRLLLAGRAGKLGQLQSVGIIMASEFAFCATPGGSGGPLTLMALLAR RGLRPAQTSAVFAVDQLADLTFFLCALGAILIYALSHSLSPNMESSLIFSAVFLVGLF VGAVMLIRYLHQVIRFNGRVLARLGVSSRKRLHWGRKILHFRIALHDSLRLPKRRLLA VFLLSSTHWLLRFSVLDLTLRGLGVDIQWAWTFLIQMVSLSAGQLSLIPGGAGGTELT SAALLAPMIGKSTAAAAIVIWRAVTFYFYLVAGGPVFAVLAGRPLLKKLISSREASS" misc_feature 4841550..4842431 /locus_tag="PA4313" /note="Predicted membrane flippase AglD2/YbhN, UPF0104 family [Cell wall/membrane/envelope biogenesis]; Region: AglD2; COG0392" /db_xref="CDD:440161" gene complement(4842439..4842651) /locus_tag="PA4313a" /db_xref="GeneID:17373383" CDS complement(4842439..4842651) /locus_tag="PA4313a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719777.1" /db_xref="GeneID:17373383" /translation="MSDPRSAGTASPPPTLGEGCTSRYDIDALGDEDGTEFPGAAELW RRIQESASETGEANAEDTLRKKPRDC" gene complement(4842701..4843552) /gene="purU1" /locus_tag="PA4314" /db_xref="GeneID:881557" CDS complement(4842701..4843552) /gene="purU1" /locus_tag="PA4314" /EC_number="3.5.1.10" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="formyltetrahydrofolate deformylase" /protein_id="NP_253004.1" /db_xref="GeneID:881557" /translation="MRTFRLVIACPDGVGIVAKVSNFLATYNGWITEASHHSDNDNGW FFMRHEIRADSLPFDLDGFRQAFAPIAREFSMEWRITDSEVKKRVVLMASKESHCLAD LLHRWHSGELDCEIPCVIANHDDLRSMVEWHGIPYFHVPVDPQDKQPAFDEVSRLIDE HGADCIVLARYMQILPPDLCRKYAHQVINIHHSFLPSFIGAKPYHQASKRGVKLIGAT SHYVTEELDAGPIIEQDVVRVTHRDNVEDMVRLGKDVEKLVLARGLRYHLEDRVLVHG NKTVVFD" misc_feature complement(4842704..4843552) /gene="purU1" /locus_tag="PA4314" /note="formyltetrahydrofolate deformylase; Reviewed; Region: purU; PRK06027" /db_xref="CDD:235676" protein_bind 4843574..4843586 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4314" /bound_moiety="AmrZ" gene 4843812..4844186 /gene="mvaT" /locus_tag="PA4315" /db_xref="GeneID:881542" CDS 4843812..4844186 /gene="mvaT" /locus_tag="PA4315" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator MvaT" /protein_id="NP_253005.1" /db_xref="GeneID:881542" /translation="MSLINEYRATEEAIKELQERLKSLEQDDKLKKELEFEEKLRTLM GTYQKSLRDVISLLDPDAKIGKSTRTAKAPAGKRARKVKQYKNPHTGEVIETKGGNHK TLKEWKAKWGPEAVESWATLLG" misc_feature 4844049..4844174 /gene="mvaT" /locus_tag="PA4315" /note="DNA-binding domain of the bacterial xenogeneic silencer MvaT; Region: MvaT_DBD; cd16170" /db_xref="CDD:320084" misc_feature order(4844049..4844054,4844058..4844060,4844064..4844066, 4844097..4844111,4844115..4844117,4844121..4844126, 4844133..4844135,4844160..4844162) /gene="mvaT" /locus_tag="PA4315" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:320084" gene complement(4844271..4845713) /gene="sbcB" /locus_tag="PA4316" /db_xref="GeneID:881546" CDS complement(4844271..4845713) /gene="sbcB" /locus_tag="PA4316" /EC_number="3.1.11.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="exonuclease I" /protein_id="NP_253006.1" /db_xref="GeneID:881546" /translation="MTVNASIFWYDYETTGIDPRRDRPLQIAGIRTDEALNEIGEPMN LYCRPSDDILPHPMACLITGITPQRLAERGLSEADFMTRVHAQLAQPATCVAGYNSLR FDDEVTRYSLYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWPQLDGRLSLK LEMLTAANGLEHGQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVRL LQPLVHVSGRFSAERHFLSVVLPLAWHPRNRNALIVCDLCADPAPLLELSAEDLRRRL YTRRDELAEGELPVPLKQIQVNRCPVVAPLSVLRAEDRQRTGIELDECQQKAELLRQH QTVWADKLTALYGEESFSASDDPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPF DDARLQELFFRYRARNFPETLNVAERQQWESFCRNRLSHEEYGAPNTLPAFEAALEAC RQEQGGTLPAVLAAWRDYAAELRQRYSLET" misc_feature complement(4844286..4845713) /gene="sbcB" /locus_tag="PA4316" /note="exonuclease I; Provisional; Region: sbcB; PRK11779" /db_xref="CDD:236979" gene 4845938..4846675 /locus_tag="PA4317" /db_xref="GeneID:881547" CDS 4845938..4846675 /locus_tag="PA4317" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253007.1" /db_xref="GeneID:881547" /translation="MNDTSNPYATPASALQPTQAVPPVIGDYDFRIGDVISEAWAKIK GVKGILIGAFVVYSVVIQTITFILTLLFGGIGLMSEADPIAFAVGQMIASLVATAVGY PFFTGLTMIGIRRAADQPATFNEMFNYFGMLVPLLLTGLLMMLMVYVGFFLLIIPGLY LSVAYMLALPLVAERGLTPWQALETSRKAISRHWFKVFGLLLVLSLLMLVSMIPLFIG LIWTGPLFVVSMGILYRTIFGVRPLGN" misc_feature <4846382..>4846600 /locus_tag="PA4317" /note="Membrane-anchored glycerophosphoryl diester phosphodiesterase (GDPDase), membrane domain [Lipid transport and metabolism]; Region: UgpQ1; COG4781" /db_xref="CDD:443811" gene 4846713..4847510 /locus_tag="PA4318" /db_xref="GeneID:881548" CDS 4846713..4847510 /locus_tag="PA4318" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253008.1" /db_xref="GeneID:881548" /translation="MTPRWLASDFPRHGPPMPPNAAARLVAPASRPGAEVLDTHYHVE TPEGIDLLLRPAGVVPRALAYTIDLCIRGLIMLVLMLGLAFLGKLGAGLGLLLTFIMT WWYMVLFEVLNQGRSPGKQMMGLRVVHDDGTPVGWAASLLRNLLRFADILPFGYALGL LCCLNHPAFKRLGDIAAGTLVVYREPELSRPSLPDVEPQLPPFPMSLEEQRAFLGFAE RGAALSSARREELAGILAEPLGVEPVRAQAEINGIARGFLGLRQESA" misc_feature 4846839..4847264 /locus_tag="PA4318" /note="Uncharacterized membrane protein YckC, RDD family [Function unknown]; Region: YckC; COG1714" /db_xref="CDD:441320" gene 4847507..4848487 /locus_tag="PA4319" /db_xref="GeneID:881549" CDS 4847507..4848487 /locus_tag="PA4319" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253009.1" /db_xref="GeneID:881549" /translation="MKQSLFEQRHQAAWLRFDKRLAFLEKGKKLEGSSDDFAADYRRL CQQLALAQERGYSSHLIDQLQQLAMRGHQQFYRHRSHLGSRILGFLLAGLPRLVREEW RSIAVASLLFYGSALLMGLLVYHFPDLIYSVVSPDKVSEMESMYAPETTRLGPLGARD TSDDWEMFGFYIMNNIGIAFQTFASGVLLGLGSLFFLLFNGLMIGSVAGHLTQIGYVQ TFWPFVIGHGAFELTAITFAGAAGLKLGWALLAPGRLTRGEALRLAARRSVQLIAGVI VLLLLAAFTEAYWSSISHFEPRVKYAVGAVLWLLVGSYFLFAGRSRHAPD" misc_feature 4847528..4848472 /locus_tag="PA4319" /note="Stage II sporulation protein SpoIIM, component of the engulfment complex [Cell cycle control, cell division, chromosome partitioning]; Region: SpoIIM; COG1300" /db_xref="CDD:440911" gene 4848474..4850045 /locus_tag="PA4320" /db_xref="GeneID:881534" CDS 4848474..4850045 /locus_tag="PA4320" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253010.1" /db_xref="GeneID:881534" /translation="MRLTDASVAIRPRSAWEALDLGILLAHRHARLLMGSWALLTLPL FAVLSLLLWQHPTLAILIFWWLKPAFERLPLYILSHALFGDTPTLRQALRAYPALLRK QLPASLLWRRFSPTRSFDLPVLQLEGLAGEPRSQRLIVLSQRNAGGATWLTVVGVHLE MALWAGFAMLLYLLIPAQNEIDWNWQSLLDPEAGEWLWLEHLSNLLYVLVLVVWEPIY VACGFTLYLNRRTELEAWDIELVFRRLRQRLVGSAYVLLLGLTASLAWLPAPSAYAEP AAATSAGEAELPPEQARLLRQKLNSEQAGKQIRAIVDGAPFKNSETVTGWRFGDKTEK KDSRKEDEERLKAFFEALANWVPFRHAAQVIEVLLWALLFSAVFLLVWRYREWLRLFV GNLGLPQRARREAPTVMFGLDLSPESLPDDIASNAERLWNEKPREALGLLYRGLLSRL LHDYRLPLKGSHTEGEVLRLVEGLEQQRPLLHYSQLLTAQWQALAYGHRLPADDTRQR LCDGWRSLFAAGAKP" misc_feature 4849797..4850015 /locus_tag="PA4320" /note="Domain of unknown function (DUF4129); Region: DUF4129; pfam13559" /db_xref="CDD:433308" gene 4850042..4851313 /locus_tag="PA4321" /db_xref="GeneID:881535" CDS 4850042..4851313 /locus_tag="PA4321" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253011.1" /db_xref="GeneID:881535" /translation="MMSRRARFLLLAVLLLLAGLLAIFLASRLQPYTETIDLGPSPEA RRNPYLAAELFLRKQGVTVSRADGLEVLKELPPSGHTLLLLGSRSGMTPGQARRLLQW SEQGGHLVLIAERLWDEDEKKSGDLLLDSLDIRQYLTEDFDDSQDRASEETADADADE GSVDDHATEAPPEDTAGEEEEPADSVPDYSALTRLYLENERSPAYIGFDPDYHLYDPQ NHAYAWANSGDATHLLQMQHGKGLVTVLTDAWIWQNRNIEQYDNAWLLWYLTQDNQVT LLYRAERDSLATLLARHFPEALAAALLLLLAGLWRAGLRQGPLQPVASRSRRQLEEHL RAGADFLLRQRGHVALLHGLQRDILRRARRRHPGFEQLGVAEQWQILGRMTRLPPSAI SQAMRPYPAQRLSAADFTRQVAHLQSLRNAL" misc_feature 4850162..4850851 /locus_tag="PA4321" /note="Domain of unknown function (DUF4350); Region: DUF4350; pfam14258" /db_xref="CDD:464118" gene 4851310..4852317 /locus_tag="PA4322" /db_xref="GeneID:881562" CDS 4851310..4852317 /locus_tag="PA4322" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253012.1" /db_xref="GeneID:881562" /translation="MSEQTPEQPSTAPNPALQRQRASQLAQALRTELQKALIGQGAVI DDVLTALLAGGHVLVEGVPGLGKTLLVRALARCFDGGFARIQFTPDLMPSDVTGHAVY DLASEQFKLRKGPVFTHLLLADEINRAPAKTQAALLEVMQERQVTLEGRALPVPQPFM VLATQNPIEQEGTYPLPEAELDRFMLKLRIDYPAEAEEQTLVRQVTRSARSDMLDVAN LRPLLKDKDVLALQRIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRC GRARALLRGGEFVVPDDIKGCALAVLRHRVRLSPELDIEGLSVDQVLQQLLDQVPAPR V" misc_feature 4851385..4852272 /locus_tag="PA4322" /note="MoxR-like ATPase [General function prediction only]; Region: MoxR; COG0714" /db_xref="CDD:440478" gene 4852314..4853645 /locus_tag="PA4323" /db_xref="GeneID:881563" CDS 4852314..4853645 /locus_tag="PA4323" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253013.1" /db_xref="GeneID:881563" /translation="MKPSRALLALFAALLLLAIGLGSLSALGQRLPAQLHTFWWAALA ALLLLGLLDALWARRQAVPKLSRQLSGNLPLGRWSEVRLHLQHTYRRPVRLTLFDHLP AGMDFEYLPQEVELRPGESTEVGYRVRPLNRGHFVFPRCELELPSPLRLWRQRRYLEA RGETRVYPDFARLYGAELMAVDHWLNQIGVRGGQRRGLGLEFHQLREFRDGDTLRQID WKATARKRTPIAREYQDERDQQILFLLDCGRRMRSQDGDLSHFDHALNASLLLAYVAL RQGDAVGAMTFAGDDRRHLPPGKGSAQLGALLNTVYDLQTSQRPADFPEAVQAVLSRQ RRRALVILVTNLRDEDDEELLGAVKRLGRQHRVLVASLREEVLDTLRHEPVARYEQAL AYTGTIDYLNARNGLHEKLAAHGVPVLDARPSELGPELISRYLGWKRAGVL" misc_feature 4852590..4853366 /locus_tag="PA4323" /note="Uncharacterized conserved protein, DUF58 family, contains vWF domain [Function unknown]; Region: YeaD2; COG1721" /db_xref="CDD:441327" gene complement(4853650..4854009) /locus_tag="PA4324" /db_xref="GeneID:881527" CDS complement(4853650..4854009) /locus_tag="PA4324" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253014.1" /db_xref="GeneID:881527" /translation="MGLQRHIQRHQLPSYLKVFNRITDKPMGYIGNVSEDGLLLISQL PMLVGARFELRLKVPGLGGRPQCIDFSADCRWTCEDVTPGHFDSGFHLLAPPAEFLEL VEALRRYFSFPRQPQSV" misc_feature complement(4853692..4854000) /locus_tag="PA4324" /note="PilZ domain; Region: PilZ; pfam07238" /db_xref="CDD:399904" protein_bind complement(4853978..4853990) /locus_tag="PA4324" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4324" /bound_moiety="AmrZ" protein_bind complement(4854009..4854021) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4324" /bound_moiety="AmrZ" protein_bind 4854015..4854027 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4324" /bound_moiety="AmrZ" gene complement(4854070..4854492) /locus_tag="PA4325" /db_xref="GeneID:881528" CDS complement(4854070..4854492) /locus_tag="PA4325" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253015.1" /db_xref="GeneID:881528" /translation="MRALWFCVALMPVLAQADIYRWTDAQGKVHFSATPPAGAQRVEV RPQVVERDAATRQREQRTQEYFDARREERTAAAERAGQRQAALAEECGRLRQQLSQLE RGGRFYRQDAGGGPVYLSDAELDAIRRELASRESERCR" misc_feature complement(4854319..4854477) /locus_tag="PA4325" /note="Domain of unknown function (DUF4124); Region: DUF4124; pfam13511" /db_xref="CDD:433269" gene complement(4854595..4854978) /locus_tag="PA4326" /db_xref="GeneID:881508" CDS complement(4854595..4854978) /locus_tag="PA4326" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253016.1" /db_xref="GeneID:881508" /translation="MPMRSLIVACLALSATGCNSWSLNSDLNGAYRAYDKGDCAQVML DLSRAERRIRARPYLQPEISLLRGQCLERQSLFVDAAQTYHFIIARYPTSEYAYRAKA RLETLRQLGRLSETPASASAVPTRL" misc_feature complement(4854658..>4854891) /locus_tag="PA4326" /note="Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning]; Region: CpoB; COG1729" /db_xref="CDD:441335" gene 4855072..4855878 /locus_tag="PA4327" /db_xref="GeneID:881509" CDS 4855072..4855878 /locus_tag="PA4327" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253017.1" /db_xref="GeneID:881509" /translation="MRFARRLVLLPLLSLLAACSPTTPLFVAQVTTGEVAEYKQMKSN RMTAAIEEEGDLLTYSAMAIRDNRSAEAEKLYLTGYDNRRYSAEVRGISLYQIGLIYM SRYNDQRDDAKATDYFQRVVREFPGTHAAEHAQARLLAMRQRAREPVQKSARELLATW KPQQNLDLYKTSLDPDMTLLSRRAVLKDRVDEAAELYLLAVNDPAIPAGIKEKALYQL GLMYLAPDNPHPNRDKAIEYLRRQLLDYPEGELSNKAGRHLDQALNVQPR" misc_feature <4855348..4855494 /locus_tag="PA4327" /note="tol-pal system protein YbgF; Provisional; Region: PRK10803" /db_xref="CDD:182745" gene 4855963..4856877 /locus_tag="PA4328" /db_xref="GeneID:881515" CDS 4855963..4856877 /locus_tag="PA4328" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253018.1" /db_xref="GeneID:881515" /translation="MNLHNLLVVVDPSSDEQPALTRAQWIAEHSGASVELLLCDFNPA LDGGLFFDSHSLQRARDLYLDERVTWLEQLSMPLQQAGIRTQVEAQWGKPLDRMVLQR VGETRPDLVLKSTRKHNLLRRLLLGNSDWQLIRHCPQPLWLVHHDAWRGQRLCAALDP LHASDKPAALDHRLIAAARQLEASLGLRADYLHTHAAMPRSLLFDAEMLAGYERFVLQ HEERHRQAFDDLLAAYPEIAAERRHLLAGYAEQAIPDFVRANDIDLLLMGAVARGHLD NALIGQTAERVLEEVECDLLVLKPTNDI" misc_feature 4855975..4856394 /locus_tag="PA4328" /note="Adenine nucleotide alpha hydrolase (AANH) superfamily; Region: AANH_superfamily; cl00292" /db_xref="CDD:469708" misc_feature 4856413..4856862 /locus_tag="PA4328" /note="Adenine nucleotide alpha hydrolase (AANH) superfamily; Region: AANH_superfamily; cl00292" /db_xref="CDD:469708" gene 4856960..4858411 /gene="pykA" /locus_tag="PA4329" /db_xref="GeneID:881516" CDS 4856960..4858411 /gene="pykA" /locus_tag="PA4329" /EC_number="2.7.1.40" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="pyruvate kinase" /protein_id="NP_253019.1" /db_xref="GeneID:881516" /translation="MSVRRTKIVATLGPASNSPEVLEQLILAGIDVARLNFSHGTPDE HRARARLVRELAAKHGRFVALLGDLQGPKIRIAKFANKRIELQVGDKFRFSTSHARDA GTQEVVGIDYPDLVKDCGVGDELLLDDGRVVMVVEEVAADELRCRVLIGGPLSDHKGI NRRGGGLTAPALTDKDKADIKLAADMDLDYVAVSFPRDAKDMEYARRLLTEAGGKAWL VAKIERAEAVADDDALDGLIRASDAVMVARGDLGVEIGDAELVGIQKKIILHARRNNK VVITATQMMESMIHSPMPTRAEVSDVANAVLDYTDAVMLSAESAAGEYPVEAVKAMAR VCQGAEKHPTSQKSSHRLGQTFDRCDESIALASMYTANHFPGIKAIICLTESGFTPLI MSRIRSSVPIYAYSPHRETQARVAMFRGVETIPFDPAALPAEKVSQAAVDELLKRGVV TKGDWVILTKGDSYTAQGGTNTMKVLHVGDLLV" misc_feature 4856960..4858366 /gene="pykA" /locus_tag="PA4329" /note="pyruvate kinase; Provisional; Region: PRK05826" /db_xref="CDD:235619" gene complement(4858490..4859263) /locus_tag="PA4330" /db_xref="GeneID:881502" CDS complement(4858490..4859263) /locus_tag="PA4330" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="NP_253020.1" /db_xref="GeneID:881502" /translation="MSELIRVERETGLLTLRLDRQDKKNALTRAMYSRMAEALLEAQA DTAVRVVLITGGDACFTSGNDILDFLEQPPSLRDSPVGRFMSALLEFPKPVIAAVNGP AVGIGTTLLLHCDLVFVGRNARLKMPFVNLGLTPEFGSSLILPRMLGHAKAAELLMLG QDFSGEQAAAWGLANAALEDGATVLEHARDAARRFLHLAPSAVVESKRLMKAPFIEEL RRVIAEEGDIFSTRLRSPEAIEALSAFMHRRQPDFSRFA" misc_feature complement(4858496..4859263) /locus_tag="PA4330" /note="enoyl-CoA hydratase; Provisional; Region: PRK06688" /db_xref="CDD:235852" misc_feature complement(order(4858868..4858870,4858877..4858882, 4858946..4858954,4858958..4858960,4859066..4859080, 4859090..4859092,4859186..4859188,4859192..4859194)) /locus_tag="PA4330" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(4858946..4858948,4859072..4859074)) /locus_tag="PA4330" /note="oxyanion hole (OAH) forming residues [active]" /db_xref="CDD:119339" misc_feature complement(order(4858781..4858783,4858790..4858795, 4858799..4858804,4858808..4858813,4858826..4858831, 4858835..4858843,4858847..4858849,4858865..4858876, 4858910..4858921,4858982..4858984,4859006..4859008)) /locus_tag="PA4330" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene complement(4859329..4860255) /locus_tag="PA4331" /db_xref="GeneID:881503" CDS complement(4859329..4860255) /locus_tag="PA4331" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253021.1" /db_xref="GeneID:881503" /translation="MPDIRVGERRLAVAAGSNLLDALLAGGIAVPHSCRAGSCHACLV HCLQGEVDDTLPEALDPVRREAGWRLACQCRVLGDLVLQPFDPERDGLPARVVACHWL GDVLRLRLEPERPLRYRAGQHLLLWSDDGVARPYSLASLPHEDPWLEFHIDCSAPGAF CDRARRLAPGALLRLGELRGGALRYEPDWQERPLLLMAAGTGLAPLWGILREALRAEH QAPIQLLHLARDHYLASELAELAGRHPQLRVNLVSAAQLPSALADLRLVPRRSMALLC GQPASVERFARHLYLAGVPRSQTLADLFLPHA" misc_feature complement(4859332..4860255) /locus_tag="PA4331" /note="iron-sulfur-binding ferredoxin reductase; Region: PRK05713" /db_xref="CDD:235575" gene complement(4860248..4861375) /locus_tag="PA4332" /db_xref="GeneID:881493" CDS complement(4860248..4861375) /locus_tag="PA4332" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253022.2" /db_xref="GeneID:881493" /translation="MRTDKPPLKQRALQKLLLRRFGMAAGTYLLGLVLLWLALLSGFY RAAPTTAAASTTLVVACQLAFLWLFASGRNLRYADPSLTEPQVLVAIAWLTYFLYHVD SLRGTFMVFYVLALLFGVFQLPPRVFARCAALAFIAFSGIYLVEALQQRLELPGRAAL QVLVMFIVMVWLSLFASYIQAMRQRMRQRRYALQAHQDTLRGMMRQLEDLVATDELTG LFNRRHFMRMASRALEDLLPNRQHGLALIDLDHFKRINDRHGHAAGDRVLQTFAAVAR SCLRDGDVLARYGGEEFVLLLPHADAEQLESCCERLRLAFQQAEPVGVTVDTLSLSVG MTLLYADDDLDEALQRADQALYRAKRGGRNRCDATWEVTSA" misc_feature complement(<4860278..4861348) /locus_tag="PA4332" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" misc_feature complement(4860278..4860739) /locus_tag="PA4332" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature complement(order(4860503..4860505,4860632..4860634)) /locus_tag="PA4332" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature complement(order(4860500..4860511,4860515..4860517, 4860581..4860583,4860593..4860595,4860605..4860610, 4860617..4860619)) /locus_tag="PA4332" /note="active site" /db_xref="CDD:143635" misc_feature complement(order(4860443..4860445,4860527..4860529)) /locus_tag="PA4332" /note="I-site [active]" /db_xref="CDD:143635" protein_bind complement(4860844..4860856) /locus_tag="PA4332" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4331" /bound_moiety="AmrZ" protein_bind complement(4861162..4861174) /locus_tag="PA4332" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(4861180..4861192) /locus_tag="PA4332" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4861653..4863176 /locus_tag="PA4333" /db_xref="GeneID:881494" CDS 4861653..4863176 /locus_tag="PA4333" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="fumarase" /protein_id="NP_253023.1" /db_xref="GeneID:881494" /translation="MAVIKQDDLIQSVADALQFISYYHPVDFIQAMHEAYLREESPAA RDSMAQILINSRMCATGHRPICQDTGIVTVFVRVGMDVRWDGATMSVDDMINEGVRRA YNLPENVLRASILADPAGARKNTKDNTPAVIHYSIVPGDKVEVDVAAKGGGSENKSKM AMLNPSDSIVDWVLKTVPTMGAGWCPPGMLGIGIGGTAEKAAVMAKEVLMDPIDIHEL KARGPQNRIEELRLELFEKVNQLGIGAQGLGGLTTVLDVKIMDYPTHAASLPVCMIPN CAATRHAHFVLDGSGPAELEAPSLDAYPEIVWEAGPSARRVDLDKITPEEVQSWKPGE TLLLNGKMLTGRDAAHKRMVDMLNKGETLPVDLKGRFIYYVGPVDPVGDEVVGPAGPT TATRMDKFTRQILEQTGLLGMIGKSERGPIAIEAIKDNKAVYLMAVGGAAYLVAQAIK KSKVLAFAELGMEAIYEFEVKDMPVTVAVDTNGESVHITGPAVWQKKIAESLAVEVK" misc_feature 4861653..4862546 /locus_tag="PA4333" /note="Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion]; Region: TtdA; COG1951" /db_xref="CDD:441554" misc_feature 4862517..4863113 /locus_tag="PA4333" /note="Fumarase C-terminus; Region: Fumerase_C; pfam05683" /db_xref="CDD:461714" gene complement(4863273..4864529) /locus_tag="PA4334" /db_xref="GeneID:881479" CDS complement(4863273..4864529) /locus_tag="PA4334" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="manganese transporter MntH" /protein_id="NP_253024.1" /db_xref="GeneID:881479" /translation="MAVPADASPLRKLALFVGPGLLVSVGYMDPGNWATAIEAGSRFG YALLFVVVLASFSGMLLQSLCSRLGIATGRDLAQLSRERYRPGVARGQWLLAELSIVA TDLAEVLGAALAFHLLLGVSITTGVVLTAFDTLIVLALQGANFRRLEAIVLGLIATIG ACFFVELVLIGPYWPDVAAGLRPSWDTLSSQEPLYLAIGILGATVMPHNLYLHSSVVQ TRVSGDDAASKRSAIRFSRLDTIGSLSLALLVNAAILILAAAAFHGSGHTEVVEIQDA YHLLDPLVGGALASFLFGFALLAAGQSSTFTGTIAGQVVMEGFLRAKIPCWQRRLITR GLALVPALIGVLWLGEAAVGKLLVLSQVVLSLQLPFALWPLIRFSSDRGLMGEFVNPR WVSALAWSLFGLISAANLTLLYFWFG" misc_feature complement(4863276..4864526) /locus_tag="PA4334" /note="divalent metal cation transporter MntH; Region: PRK00701" /db_xref="CDD:234815" gene complement(4864665..4864973) /locus_tag="PA4335" /db_xref="GeneID:881480" CDS complement(4864665..4864973) /locus_tag="PA4335" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253025.1" /db_xref="GeneID:881480" /translation="MCELYVKADPILYESRSRSLRIRGVVTTLRLENQFWDILREIAE GEGLSTNQLITNLYEEVMDYRGEVLNFASFLRVSCTRYLAQRREKVAELSLVGQRAQA " misc_feature complement(4864692..4864973) /locus_tag="PA4335" /note="Predicted DNA-binding protein, contains ribbon-helix-helix (RHH) domain [General function prediction only]; Region: COG4321" /db_xref="CDD:443462" gene complement(4864994..4865578) /locus_tag="PA4336" /db_xref="GeneID:881488" CDS complement(4864994..4865578) /locus_tag="PA4336" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253026.1" /db_xref="GeneID:881488" /translation="MMAAKKILMLVGDYAEDYETMVPFQALQMVGHQVHAVCPDKRAG QSVRTAIHDFEGDQTYSEKPGHNFTLNADFAQARAEDYDALLIPGGRAPEYLRLNEQV LALVRDFDAARKPIAAVCHGAQLLAAAGVLQGRACSAYPACAPEVRLAGGEYVDLPPD QAHVDGHLVTAPAWPAHPAWLARFLEALGTRISH" misc_feature complement(4865015..4865563) /locus_tag="PA4336" /note="Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus; Region: GATase1_PfpI_1; cd03169" /db_xref="CDD:153243" misc_feature complement(4865219..4865221) /locus_tag="PA4336" /note="conserved cys residue [active]" /db_xref="CDD:153243" gene complement(4865682..4866293) /locus_tag="PA4337" /db_xref="GeneID:881489" CDS complement(4865682..4866293) /locus_tag="PA4337" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253027.1" /db_xref="GeneID:881489" /translation="MLRSLSLALSIVASLVGCSTPGAFFGAVDGPAFVAHPSADASHA TVYLYRPRSQWADEELEAPGIFLNNELIGSLPSNGYLAFEFETGSYKLEMRRPLAGSF WTLFADGPMDFTRIASFMLEARAGSVYYLRYDELNPPPKSEHPAGEGDGPLQLVAADL GAAEIGATHQVQEPMQFAASGYRKRVQRSFWEGVGRALDKIGI" misc_feature complement(4865856..4866176) /locus_tag="PA4337" /note="Protein of unknown function (DUF2846); Region: DUF2846; pfam11008" /db_xref="CDD:431601" gene complement(4866387..4867667) /locus_tag="PA4338" /db_xref="GeneID:881471" CDS complement(4866387..4867667) /locus_tag="PA4338" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="acyltransferase" /protein_id="NP_253028.1" /db_xref="GeneID:881471" /translation="MATPDSKERFIGLEWLRFLLGLYVVVYHTLHTYPKEQKFPGLDE LTSLGFFATSTFFVLSGFLLAHVYARSGRLRESARSFWTKRLSNLYPLHLFSLLLSIL VLLALSHLGIGPELDKATPRFVIYDTNEVLGRTHPELFLHWMSNTELFVNSILQILLL QAWNPYYLTFNAPLWSLSTLMFFYLAFPFVAPRLMRSRHKWKVLALVWLVYLIPPALV VASESYGIPWTGLLHRNPLLRLPEFLGGILAYGLFRGYRDRGMVPGRGLLAALVALVV AAFLVADYLFTQGAKHWYFLLHNGLLLPAQLLLVCLCALPADPKSAFVRHWSPRLGAA SLSLFALHVPMFTLFSRSERLIAVPGRCLDDWRACTEAAAALPSSLLYYPLFLVLLVA FCVLFQERGVVPVRKWLVRRLMPAPALAKVPRPA" misc_feature complement(4866408..4867661) /locus_tag="PA4338" /note="Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains [Cell wall/membrane/envelope biogenesis]; Region: OafA; COG1835" /db_xref="CDD:441440" gene complement(4867767..4868846) /locus_tag="PA4339" /db_xref="GeneID:881472" CDS complement(4867767..4868846) /locus_tag="PA4339" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phospholipase" /protein_id="NP_253029.1" /db_xref="GeneID:881472" /translation="MLLAIEAAQRSIELELYLVEDGHCAELFLVALLDARRRGVAVRC LFDGFGCLGLGSAWIQRLREAGGELRLYNPLRWKLTGGNLYRDHRKLLLVDGRLGYVG GAGITDEFWEPVSDVSAWREVMVEMDGPVVADWAALFERQWLACLEEKAWKPREGMTL TRLPPQPGAARGLGRVAYADARQHRDILQSLVRALNGSRRRIWLATPYFLPTWKVRRA LRKAAQRGVEVRLLLAGRLTDHAPVRYAGQRYYPRLLRAGVRIHEYQPRFLHLKMVMV DDWVSVGSCNFDHWNLRFNLDANLEALDPDFTNEAAASLLADFADSREVTLAMWRARP LWMRLHQRLWGWLDRVVVNFLDRRR" misc_feature complement(4867797..4868846) /locus_tag="PA4339" /note="Phosphatidylserine/phosphatidylglycerophosphate/car diolipin synthase [Lipid transport and metabolism]; Region: Cls; COG1502" /db_xref="CDD:441111" gene complement(4868921..4869493) /locus_tag="PA4340" /db_xref="GeneID:881468" CDS complement(4868921..4869493) /locus_tag="PA4340" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253030.1" /db_xref="GeneID:881468" /translation="MHKLICLGLALLALPVQAAWYLDYESSRLSFISTKNATLSEVGR FLVMHGKVDDKGQARLRVELDSVSTDIPLRDERIREYLFETKRFAEAEITAQLDLAPI VELADGVQLEMRQPVTVSLHGKRKSYASDLLVTRLDEHRFQVVTLSPLVLDAADFDLA PGIETLRKLAGAGSIGLSVPVGAVLIFTSR" misc_feature complement(4868930..4869436) /locus_tag="PA4340" /note="YceI-like domain; Region: YceI; smart00867" /db_xref="CDD:214870" gene complement(4869558..4870328) /locus_tag="PA4341" /db_xref="GeneID:881469" CDS complement(4869558..4870328) /locus_tag="PA4341" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253031.1" /db_xref="GeneID:881469" /translation="MPEREEAGTVRSVERALAILDLLGQHQALGLEELHYLTELPKAT VSRLLHTLLEQGWLYRGLTDRRYRLRSTRLYGDAAERLRCQVVERSAPLLVELSERTG LVADLSILDGDRLLVAESSVPGVLRKRYPANRLVVGQHASLFHSAMGKACLGELAESE VRRLARQHQVDEDLWLRTREQAHGQGYGERTEGHWEYPVRLPFLIRAVALPVRAQGRL LGSVALHWPRDQDCVERVRRRHLGTLADTVSQLQHALD" misc_feature complement(4869564..4870313) /locus_tag="PA4341" /note="DNA-binding transcriptional regulator, IclR family [Transcription]; Region: IclR; COG1414" /db_xref="CDD:441024" gene complement(4870428..4871912) /locus_tag="PA4342" /db_xref="GeneID:881456" CDS complement(4870428..4871912) /locus_tag="PA4342" /EC_number="3.5.1.4" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amidase" /protein_id="NP_253032.1" /db_xref="GeneID:881456" /translation="MSATRHRSDGHEEIVALDALPLSAAIRRRELSCREVMQAYLAQI ERFNPRVNAIVSLQAESRLLTQADERDRQLARGEWLGWMHGMPQAIKDLAATSGIPTT LGSPLFAGQVPEHDAIVVERVKSSGAIVIGKTNVPEFGLGSQTYNPLFGTTRNAYDPA RIAGGSSGGAAVALALRMLPVADGSDMMGSLRNPAAYNNVYGFRPSQGRVPHGPQAEL FVQQLATEGPMGRSVADLARLLATQAGYDPRCPLSLRDDPRRFADDLGRDFRGARLGW LGDYAGYLPMEEGVLELCEAALGDFAELGCDVEACLPDYPLERLWRTWLVHRQWLVQG SLGELYADPARRVRLKPEAQWEVESGLGLGAAEVYRASLDRSDWYRALARLFERYDFL LLPSAQVFPFDAETAWPRQVAGRPMDTYHRWMEVVIGPTLAGLPAISVPIGFGAAGLP MGLQIIGPAQADLAVLQLAHAHEGLTRWVSRRPPAMLEAPGGID" misc_feature complement(4870446..4871897) /locus_tag="PA4342" /note="amidase; Provisional; Region: PRK07486" /db_xref="CDD:236028" gene complement(4871913..4873232) /locus_tag="PA4343" /db_xref="GeneID:881457" CDS complement(4871913..4873232) /locus_tag="PA4343" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_253033.1" /db_xref="GeneID:881457" /translation="MHACPSGTSRTRQVAAAVIGNALEWYDFIVYGFLSSLIARLFFP SGDEYTSLLMALATFGVGFFMRPVGGVLLGLYADRRGRKAAMQLIILLMTLSIAMIAF APTYAAIGVGAPLLIVIARMLQGFATGGEYASATAFLVESAPPHRRGLYGSWQLFGQC LAVFAGAGMGALVTHCLDAEALESWGWRVPFLFGLLIGPVGLWIRRYMGETEAFLEAI REPGERQGLLGVLREYRRSVLVSMGLTVVGTVSFYVVLVNMPTFAHKQLGLPLDEVFM VQMAAVALMTLVIPLAGGLSDRVGRRPVLLVATLAFMLMVYPLFAWVAAAPSLGRLLL MQLLLCTAIGGFFGPAPTAVAEQFPVRVRSTGLAVAYNLAVMLFGGFAPFIVTWLTEV GGSPVAPAFYVLGAAFLGLLATLYLREGATPAPRPREPALGKPARSL" misc_feature complement(4871970..4873193) /locus_tag="PA4343" /note="Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Region: MFS_CitA; cd17368" /db_xref="CDD:340926" misc_feature complement(order(4872099..4872101,4872108..4872113, 4872120..4872125,4872132..4872134,4872180..4872182, 4872192..4872194,4872204..4872209,4872366..4872368, 4872378..4872380,4872462..4872464,4872471..4872479, 4872486..4872491,4872498..4872500,4872744..4872746, 4872753..4872758,4872765..4872767,4872825..4872827, 4872834..4872842,4872846..4872851,4873023..4873025, 4873137..4873139,4873146..4873151,4873158..4873163)) /locus_tag="PA4343" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340926" gene complement(4873270..4874490) /locus_tag="PA4344" /db_xref="GeneID:881463" CDS complement(4873270..4874490) /locus_tag="PA4344" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_253034.1" /db_xref="GeneID:881463" /translation="MARHRHIVAWLEEVADDLRSLRQDIHAHPELGFEERRTAALVAE CLRGWGYEVHEGIGRTGVVGVLRQGDGTRRLGLRADMDALPIVEATGLGYSSCHGGRM HACGHDGHTAMLLGAARYLAATRRFDGTLVLIFQPAEEGQGGAEAMLADGLLERFPCD ALFGMHNMPGLEAGHLGFRAGPMMASQDLLSVTLEGVGGHGSMPHLSVDPLLAASSAV MALQSVVARNVDPQKAAVVTVGALQAGEAANVIPQRAVLRLSLRALDGQVREQVLQRV RQIIELQAASYGCQASIEHYPAYPVLVNSVEETEFARQVGVELAGAEQVDGDTPKLMG SEDFAWMLQRCPGSYLFIGNGRGRPMVHNPAYDFNDDILVRGAAYWGALAETWLAAPA ASGLRLTAANNGAA" misc_feature complement(4873333..4874445) /locus_tag="PA4344" /note="M20 Peptidase aminoacylase 1 subfamily; Region: M20_Acy1-like; cd05666" /db_xref="CDD:349916" misc_feature complement(order(4873405..4873407,4873993..4873995, 4874071..4874073,4874170..4874172,4874176..4874178)) /locus_tag="PA4344" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:349916" misc_feature complement(order(4873711..4873719,4873735..4873737, 4873741..4873746,4873756..4873776,4873825..4873827, 4873834..4873836,4873843..4873845,4873855..4873860, 4873924..4873926)) /locus_tag="PA4344" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:349916" gene complement(4874655..4875245) /locus_tag="PA4345" /db_xref="GeneID:881464" CDS complement(4874655..4875245) /locus_tag="PA4345" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253035.1" /db_xref="GeneID:881464" /translation="MPVVLCVLLLLLSPLLSAAEWQLEPDYSRISFVSVKRAKMAEVQ RFDRLSGQIDKQGVARIVVPLGTLDSGLALRDERMKDNFFETSRFPEATVESRLDMAG FDDLRVGQSRVEKLDFTLDLHGQQRRLKADVLVTRQGEGLVQVATLEPVLLKLLDFDL EEKLKPLKEMANIPSITPEVPVFAVLNFREVPPEQF" misc_feature complement(4874679..4875185) /locus_tag="PA4345" /note="YceI-like domain; Region: YceI; smart00867" /db_xref="CDD:214870" gene complement(4875306..4875641) /locus_tag="PA4346" /db_xref="GeneID:881417" CDS complement(4875306..4875641) /locus_tag="PA4346" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253036.1" /db_xref="GeneID:881417" /translation="MIRRHPLLFLFVLGLLAALAWAWQNRIHLAAFPAIIGAYTAKEY CSCRYVMGNSADYCRAYTQQYVPISGFFDDEARRRVTARGLGSTQTAAWLGPREGCRL MPEADRLPD" gene complement(4875638..4876792) /locus_tag="PA4347" /db_xref="GeneID:881418" CDS complement(4875638..4876792) /locus_tag="PA4347" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253037.1" /db_xref="GeneID:881418" /translation="MLGLPLDRREGPPMPALPLSRRALAALALVFALPALAEDWPDTD WPRAQQPAGPALEAFERYAFGRRDDVRRKGIRTDAVVVIRDGRLVYERYAGPSRAETP HLTWSVSKSLLATLLGVAEGEGRFQLDDPVARYYPPFARHPEVTLRHLLNWSSGLDWQ EDYEFAPLKSSVVAMLYTRGRDDMAGFVAETPQARPPGRRFRYSSGDSNVLAAALHGM LGADYAEYPWRALFEPLGIRSAVWERDAAGTFVGSSYVYMSARDLARVGLLMQRHGRW RERQLLPLAWVEFNLTPFARYRPSAEEEGEAVPGGQWWLNRAVKGAPAPWPDVAETAF AALGHWGQALYVLPEEKLVIVRYADDRDGRFRHNEFLRLAQAAFAGEARP" misc_feature complement(4875653..4876651) /locus_tag="PA4347" /note="CubicO group peptidase, beta-lactamase class C family [Defense mechanisms]; Region: AmpC; COG1680" /db_xref="CDD:441286" gene complement(4876821..4877606) /locus_tag="PA4348" /db_xref="GeneID:881452" CDS complement(4876821..4877606) /locus_tag="PA4348" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253038.1" /db_xref="GeneID:881452" /translation="MRREPIVLFDNGSHQCLCFDDLVSGEGVQSNQFLIVDNGQYLLL DPGGDLTYTPLSLELSKRFPLQELDYIFASHQDPDIIAALDKWLLHTRARVICSKLWA RFLPHLTANYLAVSHGINTYDRVMPLPDRGQAIALGDCSLKAIPAHFLHSVGNFQLYD PVSKILFSGDMGASLVDDAAPVSDFAAHIQYMDGFHRRYMAANKICRLWARMVRDMDV EMIVPQHGRPFVGKEMISAFLYWIENLECGIDLLGPDDYRMPG" misc_feature complement(4876929..4877525) /locus_tag="PA4348" /note="ODP family beta lactamase; Region: ODP; pfam19583" /db_xref="CDD:437415" gene complement(4877691..4878587) /locus_tag="PA4349" /db_xref="GeneID:881453" CDS complement(4877691..4878587) /locus_tag="PA4349" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253039.1" /db_xref="GeneID:881453" /translation="MSWQRLLGPLDRLPTEGSLEDWHAAALARADGLGTLERAVLGGR LAASPGLAFLAGYQAALRALWPAAPEGLGALCVTEKRSVRPADLQTRLEGLVLHGQKD FVTAGDSASWWLVAARDEAPGQPPRLSMTVVLAGAPGARLEALPALPLMPDVPHSRLL LDGAHCERLPGDGWDDYVRPFRLLEDVHVLAALVGWLYGVGHECGWPSPLLLRLAGIL GGCAEVARHPVACVGTQAVLAGLFEQFSALEGQLDAAFAANASTWEALWQRDRGLLAI ANGARKVRLEKALTRLGLDPGQ" misc_feature complement(4878102..4878368) /locus_tag="PA4349" /note="Acyl-CoA dehydrogenase, middle domain; Region: Acyl-CoA_dh_M; pfam02770" /db_xref="CDD:460685" gene 4878790..4879545 /locus_tag="PA4350" /db_xref="GeneID:881446" CDS 4878790..4879545 /locus_tag="PA4350" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253040.1" /db_xref="GeneID:881446" /translation="MTQTAITREPVAGRRLKAERLNGARALREAQALRYRVFSAEFDA KLEGAEDGLDRDDYDRHCAHIGVRDLDSGALVATTRLLDHRAAERLGRFYSEEEFHLS GLDALHGPVLEIGRTCVAPEYRNGATIAVLWGELAEVLNEGGYRYLMGCASIPMRDGG MQAKAVMQRLRERYLCTDYLQAEPKNPLPPLDVPENLTAELPPLLKAYMRLGAKICGE PCWDPDFQVADVFILLKRDELCPRYARHFKAAV" misc_feature 4878886..4879188 /locus_tag="PA4350" /note="Acetyltransferase (GNAT) domain; Region: Acetyltransf_5; pfam13444" /db_xref="CDD:463880" gene 4879545..4880321 /locus_tag="PA4351" /db_xref="GeneID:881447" CDS 4879545..4880321 /locus_tag="PA4351" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyltransferase" /protein_id="NP_253041.1" /db_xref="GeneID:881447" /translation="MARLRLLLRSARLLGLVALGLGLAAWVSLRERLPGADVTPLRQR LTRWWLARLCAALPFEVRVSGEAPRQPMLWVANHVSWTDIPLLGALAPLTFLSKAEVR AWPLAGWLAEKAGTLFIRRGSGDSRLINQRLAEQLHRGRNLLIFPEGTTTNGESLRTF HGRLMASALEAGVAVQPVAISYRRDGVPDAQAPFIGDDDLLSHLGRLLRGERGSVHIQ LLEPIPSQGLDRAELARQAQQAVRLALFGTAAPTQTRRAA" misc_feature 4879662..4880279 /locus_tag="PA4351" /note="1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]; Region: PlsC; COG0204" /db_xref="CDD:439974" gene complement(4880318..4881178) /locus_tag="PA4352" /db_xref="GeneID:881434" CDS complement(4880318..4881178) /locus_tag="PA4352" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253042.1" /db_xref="GeneID:881434" /translation="MKRILVATDLSSRSELAVMRAAALAKARNAELTVLNVLDDDQPP VLIAPQRLAIANLLEVNGQALKERLGVESKAIVRVGDPVVVINAVAEEIGADLLVMGA HRHTPLRDLFIGTTLERVVRNAKIPVLRAAGAPEEEYRRVLLALDFSPTSTRAVQMAG QLGFLDAASLTALHAFEPFAKGMMRYSGIKEDRVEHYVDQEELKANVELRDYVAGLGL GREDIQLRVGEGLPINVIMTEVRRQAPQLTVLGTQGLTGFRRALIGSVAEAALGDLPC DVLAVPPKRD" misc_feature complement(4880792..4881178) /locus_tag="PA4352" /note="Nucleotide-binding universal stress protein, UspA family [Signal transduction mechanisms]; Region: UspA; COG0589" /db_xref="CDD:440354" misc_feature complement(4880336..4880764) /locus_tag="PA4352" /note="Nucleotide-binding universal stress protein, UspA family [Signal transduction mechanisms]; Region: UspA; COG0589" /db_xref="CDD:440354" gene complement(4881328..4881900) /locus_tag="PA4353" /db_xref="GeneID:881435" CDS complement(4881328..4881900) /locus_tag="PA4353" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253043.1" /db_xref="GeneID:881435" /translation="MNYLAHLHLGGPQPAQLLGSLYGDFVKGRLQGQWPDEIERAIQL HRRIDAFTDSHPLVHAAKRRFPLERRRFAGVLLDVFFDHCLARDWNDYADEPLPQFVE RVYGTLRTASPLPERLARIAPRMAAQDWLGSYREFAVLREVLGGMSRRLSRPHLLDGS WEELAQRYDDLSADFRAFYPQLQAFALSQR" misc_feature complement(4881331..4881900) /locus_tag="PA4353" /note="Acyl carrier protein phosphodiesterase [Lipid transport and metabolism]; Region: AcpH; COG3124" /db_xref="CDD:442358" protein_bind 4881989..4882028 /experiment="Beta-gal reporter assay [PMID: 22820840]" /experiment="EMSA [PMID: 22820840]" /experiment="qRT-PCR [RNA] [PMID: 22820840]" /note="'Transcription factor binding site for NP_253044.; Evidence of regulation for: PA4356, PA4355, PA4354'" /bound_moiety="PyeR" gene 4882053..4882355 /locus_tag="PA4354" /db_xref="GeneID:881441" CDS 4882053..4882355 /locus_tag="PA4354" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253044.1" /db_xref="GeneID:881441" /translation="MPLDIDEIIKALSHPVRRDMLRWLKEPEKYFVEQDHPFEIGVCA GKFDQRTGLSQSTVSVHLATLQRAGLVTSRRVGQWNFFKRNEETIQAFLDQLGDEL" misc_feature 4882062..4882352 /locus_tag="PA4354" /note="DNA-binding transcriptional regulator, ArsR family [Transcription]; Region: ArsR; COG0640" /db_xref="CDD:440405" gene 4882404..4883570 /locus_tag="PA4355" /db_xref="GeneID:881442" CDS 4882404..4883570 /locus_tag="PA4355" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_253045.1" /db_xref="GeneID:881442" /translation="MPASLLVLALSAFAIGTTEFVIMGLLPQVAGDLRVSIPSAGWLI SGYAFAVAFGAPLMAMATARLERKKALLALMGIFIVGNLLCAVAANYGLLMLARIVTA LCHGAFFGIGSVVAASLVAPNRRASAVALMFTGLTLANVLGVPLGTALGQEAGWRATF WVVTLIGVVAFVGLARVLPNDREEEKVDLRQEMSALKNPSLWLALGTTVLFAASMFAL FTYVAPLLGEVTGVSPRGVTWTLLLIGVGLTVGNVIGGRLADWRLGTTMAAVFAAMAL VSALFSWTSQALLPAEITLFFWAAAAFAAVPALQVNVVRVGHAAPNLVATLNIGAFNV GNALGAWVGGSVIDHGLGLTRVPLAAAALAALALLATLIAFSGNGRAQAQPVLD" misc_feature 4882416..4883453 /locus_tag="PA4355" /note="Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; Region: MFS_NepI_like; cd17324" /db_xref="CDD:340882" misc_feature order(4882446..4882451,4882458..4882463,4882470..4882472, 4882566..4882568,4882716..4882721,4882725..4882733, 4882740..4882742,4882800..4882802,4882809..4882814, 4882821..4882823,4883025..4883027,4883034..4883039, 4883046..4883054,4883061..4883063,4883145..4883147, 4883157..4883159,4883304..4883309,4883319..4883321, 4883331..4883333,4883376..4883378,4883385..4883390, 4883397..4883402,4883409..4883411) /locus_tag="PA4355" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340882" gene 4883607..4884659 /gene="xenB" /locus_tag="PA4356" /db_xref="GeneID:881382" CDS 4883607..4884659 /gene="xenB" /locus_tag="PA4356" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="xenobiotic reductase" /protein_id="NP_253046.1" /db_xref="GeneID:881382" /translation="MATLFDPIVLGDLELPNRIVMAPLTRCRADEGRVPNALMAEYYA QRADAGLILSEATAVTPMGVGYPDTPGIWSDDQVRGWSNVTKAVHAAGGRIFLQLWHV GRISDPLYLNGELPVAPSAIAAEGHVSLVRPKRPYVTPRALDTEEIADIVEAYRQGAE RAKAAGFDGVEIHGANGYLLDQFLQDSTNKRTDRYGGSIENRARLLLEVTDAAISVWG AQRVGVHLAPRADSHDMGDSNRLETFSHVARELGKRGIAFICAREAQADDSIGVALKK AFGGPYIANEQFTLDSANAILAKGDADAVAFGVPFIANPDLVERLRQGAELNPPRPET FYTGGTEGYLDYPTLA" misc_feature 4883613..4884602 /gene="xenB" /locus_tag="PA4356" /note="Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a...; Region: OYE_like_FMN; cd02933" /db_xref="CDD:239243" misc_feature order(4883673..4883675,4883679..4883681,4883772..4883774, 4883898..4883900,4884279..4884281,4884462..4884464, 4884522..4884524,4884528..4884536) /gene="xenB" /locus_tag="PA4356" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:239243" misc_feature order(4883673..4883675,4883679..4883681,4883772..4883774, 4883898..4883900,4883904..4883906,4883925..4883927, 4884123..4884125,4884132..4884134,4884138..4884140, 4884279..4884281,4884300..4884302,4884462..4884464, 4884522..4884524,4884528..4884533) /gene="xenB" /locus_tag="PA4356" /note="active site" /db_xref="CDD:239243" misc_feature order(4883679..4883681,4883904..4883906,4884123..4884125, 4884132..4884134,4884138..4884140,4884531..4884533) /gene="xenB" /locus_tag="PA4356" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:239243" misc_feature 4884138..4884140 /gene="xenB" /locus_tag="PA4356" /note="catalytic residue [active]" /db_xref="CDD:239243" gene complement(4884719..4884961) /locus_tag="PA4357" /db_xref="GeneID:881383" CDS complement(4884719..4884961) /locus_tag="PA4357" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253047.1" /db_xref="GeneID:881383" /translation="MATLMQLRAALEDGQARGLKQLSRQVDAPPALVEAILERLIALG KVERVAAQSSGGCGGGCKGCAQRDPCAEPEPYFRLR" misc_feature complement(<4884803..4884955) /locus_tag="PA4357" /note="FeoC like transcriptional regulator; Region: FeoC; pfam09012" /db_xref="CDD:462655" gene complement(4884961..4887261) /locus_tag="PA4358" /db_xref="GeneID:881401" CDS complement(4884961..4887261) /locus_tag="PA4358" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ferrous iron transporter B" /protein_id="NP_253048.1" /db_xref="GeneID:881401" /translation="MTALTLGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGA FHTVRHAVRLVDLPGTYSLTSVSAQASLDEQIACRYIASGEVDVLVNVVDAANLERNL YLTVQLREMGIPCIVALNMLDIARSQRIRIDIDGLARRLGCPVVPLVSTRADGIDELK AAIDSLQLPQAALAVDYPPAIQAQVGYLLETRAPAASAIEPRWLALQALEGDIFNGPA LGLPPATLEQARRGCGEEPELAIVDARYRLIGEICAAVCDHQQAQPHRLTQWLDRVVL NRWLGLPIFLLVMYLMFFFAINIGGALQPIFDKGSSAIFIDGIQWLGIRFGLPDWLTV FLAQGIGGGVNTVLPLVPQIGLMYLFLSLLEDSGYMARAAFVMDRLMQALGLPGKSFV PLIVGFGCNVPSIMGARTLDAQRERLITIMMAPFMSCGARLAIFAVFAGAFFGQGGAL VIFSLYLLGIVVAILTGLLLKHTLMRGEASPFVMELPLYHVPHLKSLLLQTWSRLRGF VVRAGKVIILVSLVIGGLNSITLDGKPVQGDIGHSALASVSQRLTPLLAPLGVQPDNW QATVGLVTGAMAKEVVVGTLNTLYTAEQIQGEAFDYEGYDLPGQLREALVETWDGLVD TFSLSVLANPVEASMADGDMETGSMGTMASKFGSPIAAYSYLVFVLLYVPCVTAMGAI ARESSKGWMAFSVLWGLNVAYSLATLCYQVATFAAHPERSVLTIAVVLLFNLILMTCL RLFGREQVLQLPGRMADAPSGQGGCH" misc_feature complement(4884964..4887261) /locus_tag="PA4358" /note="Fe(2+) transporter permease subunit FeoB; Region: feoB; PRK09554" /db_xref="CDD:236563" misc_feature complement(4887211..4887234) /locus_tag="PA4358" /note="G1 box; other site" /db_xref="CDD:206667" misc_feature complement(order(4886809..4886817,4886893..4886895, 4886899..4886904,4887208..4887219,4887223..4887225)) /locus_tag="PA4358" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206667" misc_feature complement(4887142..4887156) /locus_tag="PA4358" /note="Switch I region; other site" /db_xref="CDD:206667" misc_feature complement(4887151..4887153) /locus_tag="PA4358" /note="G2 box; other site" /db_xref="CDD:206667" misc_feature complement(4887085..4887096) /locus_tag="PA4358" /note="G3 box; other site" /db_xref="CDD:206667" misc_feature complement(order(4887004..4887009,4887019..4887045, 4887058..4887087)) /locus_tag="PA4358" /note="Switch II region; other site" /db_xref="CDD:206667" misc_feature complement(4886893..4886904) /locus_tag="PA4358" /note="G4 box; other site" /db_xref="CDD:206667" misc_feature complement(4886809..4886817) /locus_tag="PA4358" /note="G5 box; other site" /db_xref="CDD:206667" gene complement(4887279..4887506) /locus_tag="PA4359" /db_xref="GeneID:881402" CDS complement(4887279..4887506) /locus_tag="PA4359" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="ferrous iron transporter A" /protein_id="NP_253049.1" /db_xref="GeneID:881402" /translation="MSALQPSRSYRITGYSPAISNGYRQRLFSMGLLPGAALRVVRIA PLGDPIQVETRQTSLALRRKDLALLTLVPLD" misc_feature complement(4887282..4887503) /locus_tag="PA4359" /note="ferrous iron transporter A; Region: feoA; PRK09555" /db_xref="CDD:181949" gene complement(4887722..4888557) /locus_tag="PA4360" /pseudogene="unknown" /db_xref="GeneID:881406" gene 4888848..4889111 /locus_tag="PA4360a" /db_xref="GeneID:17373384" CDS 4888848..4889111 /locus_tag="PA4360a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719778.1" /db_xref="GeneID:17373384" /translation="MELNKSLLDCMRAVRRRLREEQALDIHFQQRDAIAAMQAACARS GDATTRELGQRLGRLSGVALPPAEPSLLPAQAPSRQYAGPLRG" gene complement(4889112..4890101) /locus_tag="PA4361" /db_xref="GeneID:881407" CDS complement(4889112..4890101) /locus_tag="PA4361" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_253051.1" /db_xref="GeneID:881407" /translation="MRILVTGATGFIGGRFARFALEQGLSVRVSGRRADAVEHLVARG AEFVPGDLADPALVLRLCEDVEAVVHCAGAVGVWGPRERFLAANVGLAESVVEACMRQ KVRRLVHLSSPSIYFDGRDHLDLNEEYVPRRFSDHYGATKYQAEQLVLSARDLGLEVL ALRPRFVVGAGDTSIFPRMIQAHRKGRLRILGNGLNRVDFTSVHNLNDALFSCLLAGE PALGKVYNISNGQPVPFWDAVNYVMRQLDLPPVGGHLPYAVGYGLAALNEGVCRILPG RPEPVLFRLGMAVMAKNFTLDINRAREYLDYDPRVSLWTALDEFCAWWRAQGL" misc_feature complement(4889124..4890098) /locus_tag="PA4361" /note="Nucleoside-diphosphate-sugar epimerase [Cell wall/membrane/envelope biogenesis]; Region: WcaG; COG0451" /db_xref="CDD:440220" gene 4890286..4891344 /locus_tag="PA4362" /db_xref="GeneID:881412" CDS 4890286..4891344 /locus_tag="PA4362" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253052.1" /db_xref="GeneID:881412" /translation="MASHWMIYGANGYTGRLVAEQAQREGLTPLLGGRNPAALHALGS QLGLECRVFDLGDPQACREALDQVKVVAHCAGPFSATSTPMIAACRAAGTHYVDITGE IAVFEQAHAGDAEAREAGIVVCPGVGFDVIPTDCLAACLKEALPDAQRLALGFDTGSG LSTGTAKTSVEGLKFGGKIRENGRLRDVPLGYKRRDIDFGRGLRHAVTIPWGDVATAY YSTGIPDIEVYLPAPPLLALGMRLIDPLRPLLGRQRVQDWLKGQVDKRIAGPDQAARE RLRTWVWGEARNARGERRTARLETANVYDLTLHGVLLAVRHLLDYQGPGGYFTPSRLL GARCVESLPGSGRITVIG" misc_feature 4890298..4891335 /locus_tag="PA4362" /note="Uncharacterized conserved protein, related to short-chain dehydrogenases [Function unknown]; Region: COG3268" /db_xref="CDD:442499" gene complement(4891345..4892247) /gene="iciA" /locus_tag="PA4363" /db_xref="GeneID:881413" CDS complement(4891345..4892247) /gene="iciA" /locus_tag="PA4363" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="chromosome replication initiation inhibitor protein" /protein_id="NP_253053.1" /db_xref="GeneID:881413" /translation="MILFDYKLLAALAAVVEQGGFERAAQALGLSQSAVSQRIKLLEA RVGQPVLVRETPPHPTDLGRRLLNHVQQVRLLEGDLQRWVPNLDEGGAPERLRIALNA DSLATWWAAAVGDFCAERRVLLDLVVEDQEVGLKRMRAGEVAGCVCGSARPVAGARSL LLGAMRYRGLASPDFIARHFPRGVEAAALAGVPAIVFGPDDLLQHRFLKDLGVEGGFI HHLCPSSEGFVRLTAGGLGWGLVPERQVQGELARGELVELLPGQVIDVPLYWHYWRNG GELLASLTEHLLARAGDGLVRVSG" misc_feature complement(4891360..4892238) /gene="iciA" /locus_tag="PA4363" /note="ArgP/LysG family DNA-binding transcriptional regulator; Region: PRK03635" /db_xref="CDD:235144" protein_bind 4891411..4891423 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4892345..4892746 /locus_tag="PA4364" /db_xref="GeneID:881346" CDS 4892345..4892746 /locus_tag="PA4364" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253054.1" /db_xref="GeneID:881346" /translation="MAGETSLRTLLRTLTPELNPGDYVFCTCAAGALPNGAEPLASFR EREGLTLVLERRQAERLGLPYEYVAAWITLTVHSSLTAVGLTAAFATALAEAGISCNV MAGYFHDHLFVARDEGRRALAVLQRLAAEAH" misc_feature 4892345..4892740 /locus_tag="PA4364" /note="ACT domain, ACT-3 family [Signal transduction mechanisms]; Region: ACT-3; COG3602" /db_xref="CDD:442821" gene 4892748..4893350 /locus_tag="PA4365" /db_xref="GeneID:881347" CDS 4892748..4893350 /locus_tag="PA4365" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_253055.1" /db_xref="GeneID:881347" /translation="MWQSYLNGILVAAGLIIAIGAQNAFVLAQSLRREHHLSVAALCV FCDAVLVSLGVFGLAKLLLENPTLLAIARWGGIAFLTWYGLKALLRALRPDALGNAAE TGPRSRKAVLLAALAVTLLNPHVYLDTVLLIGSLGAQQAAPGAYALGAASASLMWFFA LALGAAWLAPWLARPATWRLLDLMVAAMMLGMAAQLLFRG" misc_feature 4892748..4893347 /locus_tag="PA4365" /note="Arginine exporter protein ArgO [Amino acid transport and metabolism]; Region: ArgO; COG1279" /db_xref="CDD:440890" gene 4893697..4894278 /gene="sodB" /locus_tag="PA4366" /db_xref="GeneID:881397" CDS 4893697..4894278 /gene="sodB" /locus_tag="PA4366" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="superoxide dismutase" /protein_id="NP_253056.1" /db_xref="GeneID:881397" /translation="MAFELPPLPYEKNALEPHISAETLEYHHDKHHNTYVVNLNNLIP GTEFEGKSLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSPNGGGQPTGALADAINAAFG SFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGNPLTSGDTPLLTCDVWE HAYYIDYRNLRPKYVEAFWNLVNWDFVAKNFAA" misc_feature 4893706..4894266 /gene="sodB" /locus_tag="PA4366" /note="Superoxide dismutase [Inorganic ion transport and metabolism]; Region: SodA; COG0605" /db_xref="CDD:440370" protein_bind complement(4894385..4894397) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4367" /bound_moiety="AmrZ" gene 4894459..4896522 /gene="bifA" /locus_tag="PA4367" /db_xref="GeneID:881428" CDS 4894459..4896522 /gene="bifA" /locus_tag="PA4367" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein BifA" /protein_id="NP_253057.1" /db_xref="GeneID:881428" /translation="MKLDSRHSLSLKLLRVVLLAALAVGVVLSCAQIVFDAYKAKQAV SSDAQRILAMVRDPSTQAVYSLDREMAMQVLEGLFQHEAVRQASIGHPGEPMLAEKSR PLLDLPTRWLTDPILGQERTFSIRLIGRPPYSEYYGDLKITLDTAPYGENFVTTSEII FISGILRALAMGLVLFLVYHWMLTKPLSKIIEHLVSINPDRPSQHQLPLLKGHERNEL GLWVTTANQLLASIESNSHLRREAEDNLLRISQYDFLTGLPNRQLLQQQLDQILDGAG RQQRRVAVLCLGLDDFKGINEQYTYQLGDQLLIALADRLRGHSARLGSLARLGGDQFA LVQADIEQPYEAAELAQSILDGLEAPFEIDQHEVRLRATIGITLFPEDGETTEKLLQK AEQTMTLAKTRSRNRYQFYIASVDSEMRRRRELEKDLRDALQRHELHLVYQPQVDYRD HRVVGVEALLRWQHPLHGFVPPDLFIPLAEQNGSIFSIGEWVLDQACRQLREWHDQGF DDLRMAVNLSTVQLHHNALPRVVSNLLQVYRLPARSLELEVTETGLMEDISTAAQHLL SLRRAGALIAIDDFGTGYSSLSYLKSLPLDKIKIDKSFVQDLLQDEDDATIVRAIIQL GKSLGMQVIAEGVETAEQEAYIIAEGCNEGQGYLYSKPLPARELTQYLKQARRLSQAT SSERP" misc_feature 4894597..4896489 /gene="bifA" /locus_tag="PA4367" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" gene complement(4896523..4897425) /locus_tag="PA4368" /db_xref="GeneID:881429" CDS complement(4896523..4897425) /locus_tag="PA4368" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253058.1" /db_xref="GeneID:881429" /translation="MDFDLRWLFIAASLGLCAWAGWQFVHRLARARLLGDVPTSRIRS AAQGFVELYGVLEEGPEGPLQAPLTGKPCLWWRYRIEVEEKRSGREKAWRTVDKGASE SPFSLRDATDACLVDPRGAEVRPLTQQRWEAFREAPIDTLRLLESFGTLVGGERLYRY TEERLHAGEPLYALGEFRSSGGGRQGLDAERAQGAVIREWKGDFHGLLARFDSDGNGE LDEREWNRVRLAARLEAEDRHRASSAAPTRHRLGKPGEAHPFILSSQGEDDLAVQLRR QAAGAALLCLGSALLAGWLFSRLF" misc_feature complement(4896538..4897197) /locus_tag="PA4368" /note="E3 Ubiquitin ligase; Region: GIDE; pfam12483" /db_xref="CDD:403620" gene complement(4897427..4897999) /locus_tag="PA4369" /db_xref="GeneID:881385" CDS complement(4897427..4897999) /locus_tag="PA4369" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253059.1" /db_xref="GeneID:881385" /translation="MSLTAIAFWVVLLLLAGYAVVLYNGLVRLKHAVGKAWANIDVLL KQRHDELPKLVEACKQYMQHERATLERVIAARNAVASARERADVNALGKAESGLRAGL GQLFALAENYPQLKANESFQFLSQRISGLENGIADRRELYNEAVNLNNVRIEQFPDLL IARVAGFKAAELLQFSEAEKADVDLKALFG" misc_feature complement(4897442..4897999) /locus_tag="PA4369" /note="Magnetosome formation protein MamQ, lipoprotein antigen LemA family [Cell wall/membrane/envelope biogenesis]; Region: LemA; COG1704" /db_xref="CDD:441310" gene 4898193..4899533 /gene="icmP" /locus_tag="PA4370" /db_xref="GeneID:881386" CDS 4898193..4899533 /gene="icmP" /locus_tag="PA4370" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="insulin-cleaving metalloproteinase outer membrane protein" /protein_id="NP_253060.1" /db_xref="GeneID:881386" /translation="MTRMPLATASLLALAISLAGCGDDKKAEAPATPAASTQPAAPAA APAAKVDEAAAKAVIKNYADLAEATFADALSTAKDLQKAIDAFLAKPDAETLKAAKEA WFAARTPYSQSEAFRFGNAIIDDWEGQVNAWPLDEGLIDYVAKDYQHALGNPGATANI VANTEIQVGEDKIDVKEITGEKLASLNELGGSEANVATGYHAIEFLLWGQDLNGTGPG AGNRPATDYAQGKDCTGGHCDRRAAYLKAVTDLLVSDLEYMAGQWKAGVADNYRAKLE AEPVDTGLRKMFFGMGSLSLGELAGERMKVALEANSTEDEHDCFSDDTHHTLFFNGKS IRNIYLGEYKRIDGSVVKGPSLADLVAKADAAANDTLKADLADTEAKLQAIVDSAEKD GVHFDQMIAPDNKDGQQKIRDAIAALVKQTGAIEQAAGKLGIQDLKPDNADHEF" misc_feature 4898343..4899530 /gene="icmP" /locus_tag="PA4370" /note="Imelysin-like iron-regulated protein IrpA, duplicated M75 peptidase-like domain [Function unknown]; Region: IrpA; COG3487" /db_xref="CDD:442710" gene 4899696..4901117 /locus_tag="PA4371" /db_xref="GeneID:881368" CDS 4899696..4901117 /locus_tag="PA4371" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253061.1" /db_xref="GeneID:881368" /translation="MSLPSPSMPLACLLTALLLGGCGADDEPLRAEPGEHLSGGATTV LQSDRNAFSLPSANLAPSRRLDFSVGNSFFRNPWVIAPSSTTARDGLGPLFNTNACQN CHVKDGRGHPPGADAVSAVSMLVRLSIPAGPADGKTLLHQGVIPEPTYGGQLQDVGIP GVAPEGKVRVDYEPLKVRFEDGTEVELRKPILRISQLGYGPMHPQTMFSARVAPPMIG LGLLEAIPEEAILANADPDDRNGDGIRGRANQVWDAARQRTALGRFGWKAGQPNIPQQ NAHAFANDMGLTSSLLPHDDCSAAQVECRRAPDGGEPEVSDNIFAQVLFYSRNLAVPA RRKVDDPQVLAGKRLFAQANCVACHVPAFTTGSDASEPELANQRIRPYSDLLLHDMGD GLADNRPEFLASGRDWRTPPLWGIGLTETVNGHTQFLHDGRARNLLEAILWHGGEAEA AKRHVLGFDADQRSALLAFLNSL" misc_feature 4899786..4901114 /locus_tag="PA4371" /note="Uncharacterized conserved protein with two CxxC motifs, DUF1111 family [General function prediction only]; Region: COG3488" /db_xref="CDD:442711" gene 4901127..4902191 /locus_tag="PA4372" /db_xref="GeneID:881369" CDS 4901127..4902191 /locus_tag="PA4372" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253062.1" /db_xref="GeneID:881369" /translation="MFRPRLLLTSLAIALGACSPQDPQAVTSAALAQQVILPTYSRWV EADQALASSALAYCQGKEDLAKARDAFHAAQKAWAELQPLLIGPLAEGNRAWQVQFWP DKKDLVGRQVEQLLKNNPQVDAAALAKASVVVQGLSAYEYILFDSKIDLADAATKARY CPLLEAIGTHQQQLAQDILARWKNDGGMLTQMSKFPNDRYADAHEAIAELLRVQVTAL DMLKKKLGTPLGRQSKGIPQPYQAEAWRSNASLASLDASLSGAQALWEGIDGKGLKTL LPAEQKDLAGKIDAAYADSHAKLAALEQKPLSELLASEDGRNQLNALYDSLNVVHRLH EGDLARALGVQLGFNANDGD" misc_feature 4901130..4902188 /locus_tag="PA4372" /note="Imelysin-like iron-regulated protein IrpA, duplicated M75 peptidase-like domain [General function prediction only]; Region: IrpA2; COG3489" /db_xref="CDD:442712" gene 4902202..4903296 /locus_tag="PA4373" /db_xref="GeneID:881373" CDS 4902202..4903296 /locus_tag="PA4373" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253063.1" /db_xref="GeneID:881373" /translation="MLRRHVIGLGSLLLGALSFGGWSFSRLGSQPLVLSARDDADGQH YAVGYRLDGKCQFATRVAQRCHDIVQHPSLPLALFVARRPGTESYLIDLNDGRLLQTL VSQKDRHFYGHGVFHQSGEWLYATENDTTDPGRGVLGVYRFDGERLQHSGEISTHGLG PHQVSWMPDGETLVVANGGIRTEAESRVEMNLDAMEPSLVLMRRDGNLLSKETLAQQM NSVRHLAIGRDGTIVAGQQFMGDAHEHADLLAIKRPGRPFEAFPVAEEQRLAMAQYTA SVAIHDDLRLVALTAPRGNRFFIWDLDSGAVRLDAPLPDCAGVGAVKNGFVVTSGQGR CRFYDCQGERIAAQPLELPSGLWDNHLHLA" misc_feature 4902265..4903293 /locus_tag="PA4373" /note="Uncharacterized conserved protein, DUF1513 domain [Function unknown]; Region: COG3490" /db_xref="CDD:442713" protein_bind 4902320..4902332 /locus_tag="PA4373" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 4902367..4902379 /locus_tag="PA4373" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4903466..4904596 /locus_tag="PA4374" /db_xref="GeneID:881374" CDS 4903466..4904596 /locus_tag="PA4374" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) efflux membrane fusion protein" /protein_id="NP_253064.1" /db_xref="GeneID:881374" /translation="MLLRRMLIMLAAVIAVVAILAGYKVYSIRQQIALFSAPKPPISV TASLAEKRPWQSRLPAIGSLKAFQGVTLTAEVSGTVRDVLFLSGDQVKLDQPLIQLES DVEEATLRTAEADLGLARAEYQRGRELIGSKAISKSEFDRLAAQWAKTSATVAELKAA LAKKRVLAPFAGTIGIRQVDVGDYVSPGTPIATLQDLSTLLLDFHLPEQDFPLLSRGQ LVKVRVAAYPAQVFDAEIAAINPKVDNETRNLQVRAALENPDGKLLPGMFANLEVMLP GEEQRVVVPETAITFTLYGDSIYVVGQKKDEQGQVSKDDKGQPQQVVERRFVRIGERR EGLAVVLEGLEGGEQVVTSGQLKLDNGAAVAIVAERDLQQEH" misc_feature 4903610..4904575 /locus_tag="PA4374" /note="Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms]; Region: AcrA; COG0845" /db_xref="CDD:440606" gene 4904647..4907703 /locus_tag="PA4375" /db_xref="GeneID:881377" CDS 4904647..4907703 /locus_tag="PA4375" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="multidrug efflux protein" /protein_id="NP_253065.1" /db_xref="GeneID:881377" /translation="MAFTDPFIRRPVLASVVSLLIVLLGMQAFSKLVIREYPQMENAL ITVTTLYAGANAETIQGYITQPLQQSLASAEGIDYMTSVSRQNYSTISIYARIGANTD RLVTELLAKSNEVKSQLPPDAEDPVLQKEAADASALMYISFYSEQMNNPQITDYLSRV IQPKLATLPGIAEAEILGNQVFAMRLWLDPVKMAAFGVTAGEINQAVQQYNFLAAAGE VKGQLVVTSVNASTDLKSPQAFAAIPVKTDGDRRVLMGDVARVELGAASYDAISSFNG IPSVYIGIKGTPSANPLDVIKEVRAKMPELEEQLPPNLKVSIAYDATRFIQASIDEVV KTLGEAVLIVIVVVFLFLGAFRSVLIPVVTIPLSMIGVLFFMQAMGYSINLLTLLAMV LAIGLVVDDAIVVVENIHRHIEEGKPPFEAALEGAREIAVPVVSMTITLAAVYAPIGF LTGLTGALFKEFAFTLAGAVIISGIVALTLSPMMCSRLLRHEENPSGLAHRLDLIFEG LKQRYQRALHGTLDTRPVVLVFAVLVLALIPVLLMFTKKELAPEEDQGIVFLMTNSPQ TANLDYLNRYTAEFEGIFRSFPEYYSAFQINGYNGVQAGIGGMLLKPWDEREKSQMEL LHAVQAKLNEIPGVQIFAFNLPSLPGTGEGLPFQFVLNTANDYESLLQVAQRVKQRAS ESGKFAFLDLDLAFDKPELVVDIDREKAAQMGVSMQDLGVALASLLGEGEINRFTIDG RSYKVIAQVERPYRDNPGWLGSYYVKSRNGQLVALSTLIETHERARPRQLNQFQQLNS AIISGFPIVSMGEAIETVQQIAREEAPRGFAVDYAGASRQYVQEGSALLVTFGLALAI IFLVLAAQFESFRDPLVIMVTVPLSICGALIPLFLGVSSLNIYTQVGLVTLIGLISKH GILIVEFANQLRHEQGLGRREAIEQAAAIRLRPVLMTTAAMVLGVIPLILATGAGAVS RFDIGIVIATGMSVGTLFTLFVLPCIYTLVARPDAPPGVTQAANAH" misc_feature 4904647..4907697 /locus_tag="PA4375" /note="multidrug efflux RND transporter permease subunit; Region: PRK09579" /db_xref="CDD:169983" gene 4907841..4909037 /gene="pncB2" /locus_tag="PA4376" /db_xref="GeneID:881378" CDS 4907841..4909037 /gene="pncB2" /locus_tag="PA4376" /EC_number="6.3.4.21" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nicotinate phosphoribosyltransferase" /protein_id="NP_253066.1" /db_xref="GeneID:881378" /translation="MAESAFSERIVQNLLDTDFYKLTMMQAVLHNYPNAEVEWEFRCR NQEDLRLYLPAIREQLEYLAGLAISDEQLAFLERIPFLAPDFIRFLGLFRFNPRYVQT GIENDEFFLRLKGPWLHVILFEVPLLAMISEVRNRARYPAATVEQARERLQEKFDWLR REASAEELAGFKMADFGTRRRFSYRVHEAVVSGLKEDFPGCFVGTSNVHLARKLDLKP LGTMAHEWLMAHQQLGPRLIDSQSAALDCWVREYRGLLGIALTDCITTDAFLRDFDLY FAKLFDGLRHDSGDPLLWAEKTIAHYLKLGIDPLTKTLVFSDGLDLPRALKIYRALQG RINVSFGIGTHFTCDLPGVEPMNIVVKMSACNGHPVAKISDTPGKAQCRDPDFIHYLK HVFQVA" misc_feature 4907847..4909034 /gene="pncB2" /locus_tag="PA4376" /note="nicotinate phosphoribosyltransferase; Provisional; Region: PRK05321" /db_xref="CDD:235406" misc_feature order(4908372..4908380,4908453..4908458,4908699..4908701, 4908789..4908794,4908861..4908863,4908867..4908872, 4908879..4908881) /gene="pncB2" /locus_tag="PA4376" /note="active site" /db_xref="CDD:238695" gene complement(4909162..4909404) /locus_tag="PA4377" /db_xref="GeneID:881312" CDS complement(4909162..4909404) /locus_tag="PA4377" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253067.1" /db_xref="GeneID:881312" /translation="MKLEITRGLLLVGALAVATAAAAAWHEPAPNVVQMSGGHEYCPT PSALKAERPTRQEVQPNKDILLLMFGLSQGGASLSR" gene complement(4909401..4910105) /gene="inaA" /locus_tag="PA4378" /db_xref="GeneID:881313" CDS complement(4909401..4910105) /gene="inaA" /locus_tag="PA4378" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253068.1" /db_xref="GeneID:881313" /translation="MAPDLASLQRISGDSAIDQWLQVPGSWVEEPNERRGGASGVQRV YTGDGRLLYRKQQTGHVYRDWQRPFGYPTAMRERDALRAFESLGIRVPRLVYSGCRKV DGQWQALLVTEALEGFSSLDECYARGDQDRWGEAKHQRILQQIGATIARMNLAHWQHG CLYPKHIFVRVEGEAIEVALIDLEKSRRRLTVNKASQHDLKQLKRRSSWTGAQWQAFI YGYQTAFGSAIKGLQT" misc_feature complement(4909443..4910051) /gene="inaA" /locus_tag="PA4378" /note="Lipopolysaccharide kinase (Kdo/WaaP) family; Region: Kdo; pfam06293" /db_xref="CDD:428872" gene complement(4910108..4910791) /locus_tag="PA4379" /db_xref="GeneID:881358" CDS complement(4910108..4910791) /locus_tag="PA4379" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253069.1" /db_xref="GeneID:881358" /translation="MNNPPVDLDFSHKYDREHAEAYLKKHQDGLARKLSHRRDVQLAR HALKLAGQPNLVLDLPCGAGRFWPLLAEKDNRVIIGADNSADMLAVACAGQPDGVVKR VRPLQTSAFAIDLPDSSVDNIFCMRLLHHIGEADDRRVLLREFHRVTRDSVILSLWVD GNFKAWKRRRMEARRVANGEQTGYQNRFVLPAETVEREFRDAGFVVQKHLDFIPLYHM WRVYILRKE" misc_feature complement(4910114..4910752) /locus_tag="PA4379" /note="Predicted methyltransferase, contains TPR repeat [General function prediction only]; Region: COG4976" /db_xref="CDD:444001" misc_feature complement(4910342..4910626) /locus_tag="PA4379" /note="Methyltransferase domain; Region: Methyltransf_25; pfam13649" /db_xref="CDD:463945" gene complement(4910871..4912151) /locus_tag="PA4380" /db_xref="GeneID:881359" CDS complement(4910871..4912151) /locus_tag="PA4380" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_253070.1" /db_xref="GeneID:881359" /translation="MEYKQSLARRIVIAFMLMTVAVGGLFSAGIVGVVHIIEERLISR DLGGELERILRDDLAQGRNPVLDPGMRFFISDGQGSYAMPPALDQLDVGFHEVFEGDL SFHALVRDIDGRRFVLLQDQSDFEAREQVLYASVLTGYVLSIALAGLLGWMLARKVME PVVRLARQVRHREQLLGLAPPLAPDYANDEVGELAASFDETLGRLRDALKREQLFTSD VSHELRTPLMVIATSCELLAEEPSLGPRARGQLERMTKATEEMRDLVQTFLLLARAQK GEESLAPHGSLESIADDLVQVWREQVEARGLTLHYRNEGACAGQFNAPLLRAVMGNLL RNATHYTDAGSITLTLDEHGFSVEDTGAGVPEEQRERIFMPFVRGSSSSGRGEGLGLG LSLVKRICAAEGWSVTLSAVEPHGCRFEVLLDVA" misc_feature complement(4910883..4911842) /locus_tag="PA4380" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: BaeS; COG0642" /db_xref="CDD:440407" gene complement(4912141..4912824) /locus_tag="PA4381" /db_xref="GeneID:881364" CDS complement(4912141..4912824) /locus_tag="PA4381" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_253071.1" /db_xref="GeneID:881364" /translation="MRILVVEDNRDILANLADYLSLKGYTVDCAQDGLSGLHLAATEH YDLIVLDVMLPGIDGYALCRRLREDARRDTPVIMLTARDQLDDRLQGFRSGADDYLVK PFALSELSARIEAVLRRAQGGGRRELSVADLSYDLDTLEVKRAGKSLKLNPIGLKLLA VLMQKSPHVVRRDALEEAVWGDDCPDSDSLRSHVHQLRQVIDKPFSVALLHTVHGVGY RLAEEPNGV" misc_feature complement(4912210..4912824) /locus_tag="PA4381" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" gene 4913041..4913835 /locus_tag="PA4382" /db_xref="GeneID:881365" CDS 4913041..4913835 /locus_tag="PA4382" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253072.1" /db_xref="GeneID:881365" /translation="MTQAAVHSPSRPFNPWLFLALPLGLAALLLAFEPVTLDLALANL MYDPGAGFIGRHSWFLENILHDRVKQLVIAISVLGLLVSIAGLFHRPWRALSRPLAYV FLAMSLAASIVTPLKALTAVQCPWSLAQFGGEETYSSLLSPRPPTEHPGRCWPGGHAS SGFVLFALFFALRDRKPRLARYALAFAFAMGCLLSLSRMLQGAHFLSHNLWTMLFDWL ICLGLYRLMLYRPETRGQRNGGADENRVQEDDSSAPSTPNSMGTFM" misc_feature 4913134..4913742 /locus_tag="PA4382" /note="Membrane-associated enzyme, PAP2 (acid phosphatase) superfamily [General function prediction only]; Region: COG3907" /db_xref="CDD:443113" gene complement(4914127..4914510) /locus_tag="PA4383" /db_xref="GeneID:881388" CDS complement(4914127..4914510) /locus_tag="PA4383" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="camphor resistance protein CrcB" /protein_id="NP_253073.1" /db_xref="GeneID:881388" /translation="MWKSILAIALGAALGALLRWFLGLKLNSLLPSIPPGTLLANLVG GYVIGAAIAYFAQAPGIAPEWRLLIITGFCGGLTTFSTFSAEVVSLLQEGRLGWAAGA IATHVSGSLLMTLLGLFSMNWMLGK" misc_feature complement(4914133..4914456) /locus_tag="PA4383" /note="fluoride efflux transporter CrcB; Region: PRK14196" /db_xref="CDD:184564" gene 4914739..4915425 /locus_tag="PA4384" /db_xref="GeneID:881389" CDS 4914739..4915425 /locus_tag="PA4384" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253074.1" /db_xref="GeneID:881389" /translation="MRPVLLLCCLFLSATAQAEDCSPQTSVGSWCELPLAALHPTQQN VGLLQVEDDQAKLAGKKPKALERYLRKKEIPVVIGPGGRFYLTDRHHLSSALWRLDPK QGVPVKVIGRLPQASDFWEKMQENHWVWLHDARGAEIPPEALPDALAGLGDDPYRALA GYAEDENAFDKDRQSYFIEFHWARYFGERMHWRPISRATLPDDLKQALRLACEPAARE LPGYRQDCPH" misc_feature 4914775..4915416 /locus_tag="PA4384" /note="Uncharacterized conserved protein [Function unknown]; Region: COG4318" /db_xref="CDD:443459" gene complement(4915481..4917124) /gene="groEL" /locus_tag="PA4385" /db_xref="GeneID:881348" CDS complement(4915481..4917124) /gene="groEL" /locus_tag="PA4385" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="molecular chaperone GroEL" /protein_id="NP_253075.1" /db_xref="GeneID:881348" /translation="MAAKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLDKSF GAPTITKDGVSVAKEIELKDKFENMGAQLVKDVASKANDAAGDGTTTATVLAQAIVNE GLKAVAAGMNPMDLKRGIDKATVAIVAQLKELAKPCADTKAIAQVGTISANSDESIGQ IIAEAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMAAELDSP LLLLVDKKISNIREMLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAV KAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLEGATLEHLGNAKRVVINKENTTIID GAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEK KARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKGDNEEQNVGIALLRRAVESP LRQIVANAGDEPSVVVDKVKQGSGNYGFNAATGVYGDMIEMGILDPAKVTRSALQAAA SIGGLMITTEAMVAEIVEDKPAMGGMPDMGGMGGMGGMM" misc_feature complement(4915535..4917121) /gene="groEL" /locus_tag="PA4385" /note="chaperonin GroEL; Reviewed; Region: groEL; PRK00013" /db_xref="CDD:234573" misc_feature complement(order(4915559..4915579,4915586..4915588, 4915748..4915750,4915967..4915969,4915973..4915975, 4916354..4916356,4916438..4916440,4916534..4916536, 4916897..4916899,4916906..4916908,4916918..4916920, 4916942..4916944,4916948..4916950,4916978..4916980, 4916984..4916989,4917002..4917004,4917008..4917019, 4917050..4917052,4917101..4917103,4917113..4917115)) /gene="groEL" /locus_tag="PA4385" /note="ring oligomerisation interface [polypeptide binding]; other site" /db_xref="CDD:239460" misc_feature complement(order(4915640..4915642,4915646..4915648, 4915763..4915765,4915880..4915882,4915931..4915933, 4916675..4916677,4916852..4916854,4916864..4916866, 4917026..4917034)) /gene="groEL" /locus_tag="PA4385" /note="ATP/Mg binding site [chemical binding]; other site" /db_xref="CDD:239460" misc_feature complement(order(4915724..4915726,4915733..4915738, 4915742..4915744,4915769..4915771,4915823..4915825, 4916798..4916800)) /gene="groEL" /locus_tag="PA4385" /note="stacking interactions [active]" /db_xref="CDD:239460" misc_feature complement(order(4915895..4915900,4916000..4916002, 4916546..4916548,4916567..4916569,4916702..4916704)) /gene="groEL" /locus_tag="PA4385" /note="hinge regions; other site" /db_xref="CDD:239460" gene complement(4917175..4917468) /gene="groES" /locus_tag="PA4386" /db_xref="GeneID:881349" CDS complement(4917175..4917468) /gene="groES" /locus_tag="PA4386" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="co-chaperonin GroES" /protein_id="NP_253076.1" /db_xref="GeneID:881349" /translation="MKLRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVG TGRVLDNGEVRALAVKVGDKVVFGPYSGSNAIKVDGEELLVMGESEILAVLED" misc_feature complement(4917181..4917468) /gene="groES" /locus_tag="PA4386" /note="co-chaperonin GroES; Reviewed; Region: groES; PRK00364" /db_xref="CDD:178988" misc_feature complement(order(4917187..4917195,4917241..4917243, 4917250..4917252,4917265..4917267,4917295..4917297, 4917358..4917363,4917442..4917444,4917451..4917453, 4917457..4917459,4917463..4917465)) /gene="groES" /locus_tag="PA4386" /note="oligomerisation interface [polypeptide binding]; other site" /db_xref="CDD:238197" misc_feature complement(4917376..4917417) /gene="groES" /locus_tag="PA4386" /note="mobile loop [active]" /db_xref="CDD:238197" misc_feature complement(order(4917301..4917303,4917334..4917336)) /gene="groES" /locus_tag="PA4386" /note="roof hairpin [active]" /db_xref="CDD:238197" gene complement(4917663..4918130) /locus_tag="PA4387" /db_xref="GeneID:881334" CDS complement(4917663..4918130) /locus_tag="PA4387" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="phage exclusion suppressor FxsA" /protein_id="NP_253077.1" /db_xref="GeneID:881334" /translation="MRAFLFLLLLFPLVELAVLIKVGSVIGVGWTLFLIVASAFIGAA LLRVAGVATAWRARERLARGELPEQEMLEGLLIAVGGGLLMLPGFISDIFGILCLIPF TRRLMLGGLRRRVEQQALRRRAFADDLNARYGQGPSRPNVIEGEYERRDDSRN" misc_feature complement(4917675..4918091) /locus_tag="PA4387" /note="FxsA protein affecting phage T7 exclusion by the F plasmid, UPF0716 family [General function prediction only]; Region: FxsA; COG3030" /db_xref="CDD:442266" gene complement(4918199..4918933) /locus_tag="PA4388" /db_xref="GeneID:881335" CDS complement(4918199..4918933) /locus_tag="PA4388" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253078.1" /db_xref="GeneID:881335" /translation="MSVEAAKNARELLLKEYRAVLSTHSKKWPGFPFGSVVPYCLDAE GRPLILISRIAQHTHNLQADPRCSMLVGERGAEDIQAVGRLTLLAEARQLAEEEVAAA AERYYRYFPESADYHRVHDFDFWVLQPVQWRFIGGFGAIHWLAAERVPLANPFAGEAE RGMVEHMNSDHAAAIAHYVELAGLPAHAAAQLAGIDTEGFHLRIGQGLHWLPFPAACG NPGAVRQALVQLARAERWPTVEPEQG" misc_feature complement(4918241..4918924) /locus_tag="PA4388" /note="Putative heme iron utilization protein, contains PNPOx domain [Inorganic ion transport and metabolism]; Region: HugZ; COG0748" /db_xref="CDD:440511" gene 4919042..4919800 /gene="speA" /locus_tag="PA4389" /db_xref="GeneID:881338" /db_xref="PseudoCap:PA4389" CDS 4919042..4919800 /gene="speA" /locus_tag="PA4389" /EC_number="1.1.1.100" /note="'Product name confidence: class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene'" /codon_start=1 /transl_table=11 /product="3-ketoacyl-ACP reductase" /protein_id="NP_253079.1" /db_xref="GeneID:881338" /db_xref="PseudoCap:PA4389" /translation="MQLKDKVIIITGGCQGLGRAMGEYLAGKGARLALVDLNRERLDE AVAACKAAGGDARAYVCNVADEEQVTHMVAQVASDFGAINGLVNNAGILRDGLTIKVK DGQLSKMSLAQWQSVIDVNLTGVFLCTREVAAKMIELKNEGAIVNISSISRAGNMGQA NYSAAKAGVAADTVVWAKELARYGIRVAGVAPGFIETEMTAGMKPEALEKMTAGIPLK RMGKPVEIAHSVAYIFENDYYTGRVLELDGGLRL" misc_feature 4919042..4919797 /gene="speA" /locus_tag="PA4389" /note="3-ketoacyl-(acyl-carrier-protein) reductase; Provisional; Region: fabG; PRK08217" /db_xref="CDD:181297" misc_feature order(4919075..4919077,4919081..4919086,4919090..4919092, 4919147..4919155,4919306..4919314,4919483..4919491, 4919525..4919527,4919537..4919539,4919615..4919626) /gene="speA" /locus_tag="PA4389" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187535" misc_feature order(4919402..4919404,4919489..4919491,4919525..4919527, 4919537..4919539) /gene="speA" /locus_tag="PA4389" /note="active site" /db_xref="CDD:187535" gene complement(4919859..4920866) /locus_tag="PA4390" /db_xref="GeneID:881339" CDS complement(4919859..4920866) /locus_tag="PA4390" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253080.1" /db_xref="GeneID:881339" /translation="MLMLSRILLCLAALASSTSALADTVWMKNGDRLTGKITLFDGGK LLLKTDYGGDITLKWDKISTFESEQNLLVKQDAETGEHSKGIKAAGPGQVTLVNGEPK TVELASIQQMMPPKPILQDWVWNGNVDFSLDRKQAENDVSDYDIDFKTNARHGLWRHN VQGEYNREKKNGQVSTDNYSGQYALDRFIDDHWFWQGQVAYKRDMIEDLAKKRTVGTG PGYQFWDNELGAFSIATLVNRNDYEFADGEKEHFYSSSFKWDYNRYLLAKQFELFTNG EVSKPLQSGLDYELQTEAGIRYKLTSWASLSMKAEWDKFSGNDGNVNQRRYTFGLGVG W" misc_feature complement(4919862..4920485) /locus_tag="PA4390" /note="Protein of unknown function, DUF481; Region: DUF481; pfam04338" /db_xref="CDD:427876" gene complement(4920981..4921982) /locus_tag="PA4391" /db_xref="GeneID:881340" CDS complement(4920981..4921982) /locus_tag="PA4391" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253081.1" /db_xref="GeneID:881340" /translation="MSLRALCSIVVMLLAGPALADTVWLDNGDRLSGEIVLMDGGKLA LKTRYAGQVLIDWKDIDTISSDKPLLIKQQGVSGQRSRTLEAAGKGMVRIVDGGSHTV PLASIRQMVPPRPLVEDLVWEGNLDVKLDSKRNDSDKDEWKLKGDTRLRHGAWRHVLA GEVEREKKDGRKVEDNWELDYDLDRFFDEHWFWRGSYSQKHDAIDNLERQSALGTGPG YQFWDDELGRFDLVAEISRWQLEWRDQPREDFTSYSLEWDYKRLLAGTRLELYSKGTV LVPGIERIDYLLDSEYGLRYRLNSWARLSFLYELDQLRTEGGTQSDRHYLIGVGVGW" misc_feature complement(4920984..4921595) /locus_tag="PA4391" /note="Protein of unknown function, DUF481; Region: DUF481; pfam04338" /db_xref="CDD:427876" protein_bind 4921824..4921836 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4392" /bound_moiety="AmrZ" protein_bind 4921854..4921866 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4392" /bound_moiety="AmrZ" gene 4921981..4922364 /locus_tag="PA4392" /db_xref="GeneID:881341" CDS 4921981..4922364 /locus_tag="PA4392" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253082.1" /db_xref="GeneID:881341" /translation="MGVHKADRKGKTDEHAWAGSDPASAQARREALYLVLAQVPPGQV VSYGQLAELAGLGRAARWVGRTLSQLPVDTRLPWHRVLGAGGRISLPADSPGGREQRA RLREEGVLLHNDRVDIRRHGWLTAK" misc_feature 4922047..4922349 /locus_tag="PA4392" /note="Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain [Transcription]; Region: Atl1; COG3695" /db_xref="CDD:442910" misc_feature order(4922065..4922067,4922119..4922124,4922146..4922148, 4922155..4922157,4922161..4922166,4922170..4922172, 4922179..4922184,4922188..4922190,4922212..4922214, 4922227..4922229,4922248..4922250) /locus_tag="PA4392" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:119438" misc_feature order(4922119..4922121,4922212..4922217,4922221..4922223, 4922299..4922301) /locus_tag="PA4392" /note="active site" /db_xref="CDD:119438" gene 4922407..4924191 /gene="ampG" /locus_tag="PA4393" /db_xref="GeneID:881279" CDS 4922407..4924191 /gene="ampG" /locus_tag="PA4393" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="AmpG protein" /protein_id="NP_253083.1" /db_xref="GeneID:881279" /translation="MTQQSWREALVAYKSPASLALLLLGFAAGLPTMLVFNTLSVWLR EAGVARDTIGFASWLGLVYAFKWVWSPMLDQWRLPFVGRLGRRRSWLVFSQVLIALGL LGMALCNPQSHLPWLIGLALLVAFASATQDIAIDAYRLEIAEDSRQAALAACYMTGYR AAILLASAGALILAEWFGSTSLNYSQSAWGLTYALFALLILPGLVTSLLIREPAVDVP IHVNPSRFDFNHQLLSVLLLLILLISLPAMITALLDRAWPRAGLYALLMGICLSPWGR QQIRPVRELLATVRRPLLVAARGKEVPLFDFVHQAVSVMVLIILLVTVTAMCRAYYSG AWPRGTLFLLIAASCLSAPGRLLMAPVLTPITEFVQRYRWQALLLLGLISTYRLSDTV MGVMAGVFYIDMGFSKEVIASVSKVFGVLMTLIGAAAGGVLIARFSILSILFIGGAAS AATNLLFAMLAQLGPLHAEALPSHDVISLVMALEPHVLMLVMTITLDNFSGGLAASAF VAYLSSLTNLKFSATQYAMLSSTMLLLPRFIGGYSGTMVESLGYEHFFYVTAVMGIPT LLLIGWLWLRRAPSSEAPAPGHQNAEQH" misc_feature 4922497..4924008 /gene="ampG" /locus_tag="PA4393" /note="AmpG-like permease; Region: 2A0125; TIGR00901" /db_xref="CDD:273329" misc_feature order(4922500..4922505,4922512..4922514,4922602..4922604, 4922788..4922793,4922797..4922805,4922812..4922814, 4922860..4922862,4922869..4922874,4922881..4922883, 4923364..4923366,4923562..4923567,4923574..4923582, 4923589..4923591,4923673..4923675,4923685..4923687, 4923916..4923921,4923931..4923933,4923943..4923945, 4923991..4923993,4924000..4924005,4924012..4924017, 4924024..4924026) /gene="ampG" /locus_tag="PA4393" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341039" gene complement(4924247..4925083) /locus_tag="PA4394" /db_xref="GeneID:881280" CDS complement(4924247..4925083) /locus_tag="PA4394" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253084.1" /db_xref="GeneID:881280" /translation="MELNYDRLVQQTESWLPIVLEYSGKVALALLTLAIGWWLINTLT GRVGGLLARRSVDRTLQGFVGSLVSIVLKILLVVSVASMIGIQTTSFVAAIGAAGLAI GLALQGSLANFAGGVLILLFRPFKVGDWIEAQGVAGTVDSILIFHTVLRSGDNKRIIV PNGALSNGTVTNYSAEPVRKVIFDVGIDYDADLKNAQNILLAMADDPRVLKDPAPVAV VSNLGESAITLSLRVWVKNADYWDVMFMFNEKARDALGKEGIGIPFPQRVVKVVQGAM AD" misc_feature complement(4924259..4925047) /locus_tag="PA4394" /note="Small-conductance mechanosensitive channel [Cell wall/membrane/envelope biogenesis]; Region: MscS; COG0668" /db_xref="CDD:440432" gene complement(4925316..4925795) /locus_tag="PA4395" /db_xref="GeneID:881331" CDS complement(4925316..4925795) /locus_tag="PA4395" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="nucleotide-binding protein" /protein_id="NP_253085.1" /db_xref="GeneID:881331" /translation="MPSFDVVSELDKHELTNAVDNAIKELDRRFDLKGKCSFEAKDKS VTLTAEADFMLEQMLDILRSNLVKRKVDSQCMEIKDAYPSGKVVKQDVNFREGIDKDL AKKIVGLIKERKLKVQAAIQGEQVRVTGKKRDDLQEAIALLRGESLGMPLQFTNFRD" misc_feature complement(4925322..4925795) /locus_tag="PA4395" /note="Cyclic di-GMP-binding protein YajQ, UPF0234 family [Signal transduction mechanisms]; Region: YajQ; COG1666" /db_xref="CDD:441272" gene 4925899..4926999 /locus_tag="PA4396" /db_xref="GeneID:881332" CDS 4925899..4926999 /locus_tag="PA4396" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_253086.1" /db_xref="GeneID:881332" /translation="MPAGVAETDDFFPMARATAAGTRPPATNRALAGSVPAPILFSSP FMPNPDLSILVVDDAKFSSAMIGRALSQAGYQDIRFASSASEALQQLEQRPVSVLLAD WLMPEMDGLELTARVRQLDESINHYTYIVLLTGKEGENVLGEAFDRGVDDFVSKAAMN EQLVPRIYAADRLCNTLQRLLVENRLLTENIARMEERNLVDTLTGLGNPRYLRQKLAD SLRQVETRGGALCYLLVGMPEAPVLRQRHGEAFHRELLLGVARRLQQLVRPLDVLVRL DEQHFALITLVEDLHECSSSSFKRLHDGLNLKAFKTSEGFISLKAGIAMLGLDSGALP LGIDELLQRTEALLPDAYASGRIATCRLPALR" misc_feature 4926049..>4926417 /locus_tag="PA4396" /note="Two-component response regulator, PleD family, consists of two REC domains and a diguanylate cyclase (GGDEF) domain [Signal transduction mechanisms, Transcription]; Region: PleD; COG3706" /db_xref="CDD:442920" misc_feature 4926190..4926966 /locus_tag="PA4396" /note="GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants [Signal transduction mechanisms]; Region: GGDEF; COG2199" /db_xref="CDD:441801" gene 4927036..4927947 /gene="panE" /locus_tag="PA4397" /db_xref="GeneID:881354" CDS 4927036..4927947 /gene="panE" /locus_tag="PA4397" /EC_number="1.1.1.169" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-dehydropantoate 2-reductase" /protein_id="NP_253087.1" /db_xref="GeneID:881354" /translation="MTWHILGAGSLGSLWAARLGRAGLPVRLILRDRQRLRRYQQAGG LSLVEDGQASLYPIAAETPDGGQPIQRLLLACKAYDAEEAASSVAHRLAGNAELLLLQ NGLGSQQAVAARLPRSRCLFASSTEGAFRDGDFRVVFAGRGHTWLGDPRDTNAPAWLT QLSQAGIPHSWSDDILERLWRKLALNCAINPLTVLHDCRNGGLRQHPEEIAALCDELG QLLHASGYDAAARSLLEDVRAVIDATAANYSSMHQDVTRGRRTEIGYLLGYACQHGQR LGLPLPRLGTLLARLQAHLRQRGLPDR" misc_feature 4927036..4927944 /gene="panE" /locus_tag="PA4397" /note="putative 2-dehydropantoate 2-reductase; Region: PRK05708" /db_xref="CDD:235572" gene 4927998..4930094 /locus_tag="PA4398" /db_xref="GeneID:881355" CDS 4927998..4930094 /locus_tag="PA4398" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_253088.1" /db_xref="GeneID:881355" /translation="MNLRQRLDNLPVGQKLLAALLILLATVLLVANLAFISAAYWISQ ESVAPQAMQTIGRLIANPALSQPALSSPQTAEVLLRQLNDYQPLRAAALYDSNGLMLA DLQRGDTLKLPARLDRLEHWRRGEYRLNALIELPQENARPGYLLLVASGELPSAFYTG TLTASLAILGVSVLLWLLVAQQIRRLITRPIRDLEELSRQVTREENYALRAQRGNGDE IGRLADAFNTMLTRIEAREQQLKRARDDAQEAVEQAQSLAEETRRSNRKLELEVQVRS KIEKKLTGFQHYLNSIIDSMPSALIAVDEQLYVTQWNQEASQLSGTSLDDAVNQPVFL AFPSLKPFLPQLTRAAEKHSVERVERVTWALIDTPRHYALTFYPLMGGTGRGAVIRID DITQRLSLEEVMVQSEKMLSVGSLAAGMAHEINNPLGAILHNVQNIKRRLSPELAKNV ELAAEVGVPLEDINHYLDGRDIPRLLEGIQHAGSRAAKIVTHMLAFSRRSHRQMTACE LPALLEQAVEIAGNDFDLAEGFDFKSLQIVHEFDPNLGPVPVIANEVEQVLLNLLKNA AQAIHQRDDEEEGEQGRIVLRTRLTPPWAEVQVEDNGSGMPELVRKRIFEPFFTTKEV GQGTGLGLSVSYFIITNNHKGQMEVRSELGRGTCFSIRLPLESSEAVAPAQAKALPPA LPQPGSSLRRGDEEEG" misc_feature 4928145..>4928834 /locus_tag="PA4398" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" misc_feature 4928481..4930007 /locus_tag="PA4398" /note="Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms]; Region: NtrY; COG5000" /db_xref="CDD:444024" gene 4930099..4930677 /locus_tag="PA4399" /db_xref="GeneID:881317" CDS 4930099..4930677 /locus_tag="PA4399" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253089.1" /db_xref="GeneID:881317" /translation="MGNRLSKIYTRTGDRGETGLAGGRRVPKSHPRIEAIGAVDELNS QLGLLLAELLEARGAHPGLEEIVQALAPVQHRLFDLGGELAMPEYRALDETEVARLES CIDRWNDELGPLKNFILPGGSRPVAQAHVCRSLARSAERRCQALDQEETLEGVGLRYL NRLSDLLFVAARAIARRQGVAEILWEAAAKPD" misc_feature 4930114..4930656 /locus_tag="PA4399" /note="Cob(II)alamin adenosyltransferase [Coenzyme transport and metabolism]; Region: PduO; COG2096" /db_xref="CDD:441699" gene complement(4930748..4931695) /locus_tag="PA4400" /db_xref="GeneID:881318" CDS complement(4930748..4931695) /locus_tag="PA4400" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253090.1" /db_xref="GeneID:881318" /translation="MKRVHVAAAVIRGSDGRVLIARRPEDKHQGGLWEFPGGKVEDGE PVRAALARELEEELGIRVERARPLIQVRHDYADKHVLLDVWEVDGFSGEAHGAEGQPL AWVEPRELADYEFPAANAPIVQAARLPAHYLITPDGLEPGELISGVRKAVEAGIRLIQ LRAPNMFSPEYRDLAIDIQGLCAGKAQLMLKGPLEWLGDFPAAGWHLTSAQLRKYASA GRPFPEGRLLAASCHDAEELALAASMGVEFVTLSPVQPTESHPGEPALGWDKAAELIA GFNQPVYLLGGLGPQQAEQAWEHGAQGVAGIRAFWPGGL" misc_feature complement(4930763..4931695) /locus_tag="PA4400" /note="Nudix family hydrolase; Region: PRK08999" /db_xref="CDD:236361" gene complement(4931746..4932381) /locus_tag="PA4401" /db_xref="GeneID:881304" CDS complement(4931746..4932381) /locus_tag="PA4401" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutathione S-transferase" /protein_id="NP_253091.1" /db_xref="GeneID:881304" /translation="MALTIVIGNRNDSSWSLRGWLALRMSGAAFDEILVPLGRPDTRE RILQYSPTGKVPLLKSEDGDIWDSLAIAEYLAERFPEAHLWPRGEAARALARSVCAEM HSGFAALRGELPMDLRRQQPLVELSEATRQDIQRICEAWADCLRRFGQDGPFLFGHAS LADAFYAPVAARFRSYAVELPDIARTYVETIYQWPAFRAWYDAALREQAGS" misc_feature complement(4932154..4932372) /locus_tag="PA4401" /note="GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with...; Region: GST_N_1; cd03043" /db_xref="CDD:239341" misc_feature complement(order(4932163..4932168,4932175..4932177, 4932307..4932312,4932319..4932324,4932328..4932333, 4932337..4932339)) /locus_tag="PA4401" /note="putative C-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:239341" misc_feature complement(order(4932178..4932183,4932214..4932222, 4932337..4932339)) /locus_tag="PA4401" /note="putative GSH binding site (G-site) [chemical binding]; other site" /db_xref="CDD:239341" misc_feature complement(order(4932163..4932165,4932172..4932177, 4932181..4932186,4932220..4932222)) /locus_tag="PA4401" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:239341" misc_feature complement(4931773..4932117) /locus_tag="PA4401" /note="C-terminal, alpha helical domain of an unknown subfamily 3 of Glutathione S-transferases; Region: GST_C_3; cd03194" /db_xref="CDD:198303" misc_feature complement(order(4931866..4931868,4931878..4931880, 4931887..4931892,4931899..4931901,4932085..4932087, 4932106..4932108)) /locus_tag="PA4401" /note="putative N-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:198303" misc_feature complement(order(4931974..4931976,4932082..4932084, 4932091..4932096,4932103..4932108)) /locus_tag="PA4401" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:198303" misc_feature complement(order(4931866..4931868,4931875..4931877, 4932058..4932063,4932070..4932075,4932085..4932087)) /locus_tag="PA4401" /note="putative substrate binding pocket (H-site) [chemical binding]; other site" /db_xref="CDD:198303" gene complement(4932502..4933719) /gene="argJ" /locus_tag="PA4402" /db_xref="GeneID:881305" CDS complement(4932502..4933719) /gene="argJ" /locus_tag="PA4402" /EC_number="2.3.1.1" /EC_number="2.3.1.35" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bifunctional ornithine acetyltransferase/N-acetylglutamate synthase" /protein_id="NP_253092.1" /db_xref="GeneID:881305" /translation="MAVGLGPLSTLHPVPGFELGIASAGIKRPGRKDVVVMRCAEGSS VAGVFTLNAFCAAPVTLAKQRFLGEVRYLLTNTGNANAGTGEAGLAAAAQTCAKLAEL AGVAETSVLPYSTGVIGEPLPVAKIEAALPAALADLAEDRWAEAAAGIMTTDTLPKGA SRQFVHDGVTVTVTGISKGAGMIKPNMATMLGYIATDAKVAQGVLQDLLRDAANKSFN RITIDGDTSTNDCCMLIATGRAALPEVTQASGALFAALKQAVLEVSMELAQAIVRDGE GATKFVTVQVNGGATHQECLDVGYAVAHSPLIKTALFASDPNWGRILAAVGRAGVANL DVSKIDVFLGDVCIASRGGRAASYTEEQGAAVMAQAEIGIRIELGRGTCSETIWTTDL SHEYVKINAEYRT" misc_feature complement(4932505..4933719) /gene="argJ" /locus_tag="PA4402" /note="Glutamate N-acetyltransferase (ornithine transacetylase) [Amino acid transport and metabolism]; Region: ArgJ; COG1364" /db_xref="CDD:440975" gene complement(4933866..4936616) /gene="secA" /locus_tag="PA4403" /db_xref="GeneID:881307" CDS complement(4933866..4936616) /gene="secA" /locus_tag="PA4403" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecA" /protein_id="NP_253093.1" /db_xref="GeneID:881307" /translation="MFAPLLKKLFGSKNERDVKRMAKAVQAINALEPQMVALSDEQLK AKTAEFQQRYAKGETLDQLLPEAFAVVREAGKRVMGMRHFDVQLIGGMTLHDGKIAEM RTGEGKTLVGTLPVYLNALSGKGVHVVTVNDYLARRDANWMRPLYEFLGLSVGVVTPF QPPEDKRAAYAADITYGTNNEFGFDYLRDNMAFSLDDKFQRELNFAVVDEVDSILIDE ARTPLIISGQAEDSSELYIKINKLIPRLKRQVEEVEGKPTEEGHYSIDEKTRQVELNE QGHQFIEDLLSQNGLLGEGESLYSAHNLSLLTHVYAALRAHTLFHRNVEYIVQGDQIL LIDEHTGRTMPGRRLSEGLHQAIEAKEGLPIQAESQTLASTTFQNYFRLYNKLAGMTG TADTEAFEFRQIYGLDVVVIPTHRPIARKDFNDLVYLTQEEKYAAIITDIKQCQALGR PILVGTASIESSEYVSKLLQEAGIEHKVLNAKYHEKEAEIIAQAGAPGSVTIATNMAG RGTDILLGGNWEVEVAALENPTEEQIAQIKAEWQKRHQQVIEAGGLHVIASERHESRR IDNQLRGRAGRQGDPGSSRFYLSLEDNLMRIFASDRVKNFMKALGMQSGEAIEHRMVT NAIEKAQRKVEGRNFDIRKQLLEFDDVANEQRKVIYHMRNTLLSAEDVGETIKEFREE TLSATINQHIPPQSLPEQWDIEGLEAALYSDFAVRLPIQQWLDEDDKLYEETLRSKIL EQIVAAYYEKEELAGAEALRAFEKQMLLRVLDDLWKDHLSTMDHLRHGIHLRGYAQKN PKQEYKRESFTLFQELLDSIKRDTIRVLSHVQVRREDPAEEEARLRREAEELAKRMQF QHAEAPSMEQAVAGEEEELPEGPAPVVPLEPVRNEQKIGRNEPCPCGSGKKYKHCHGQ LD" misc_feature complement(4933872..4936613) /gene="secA" /locus_tag="PA4403" /note="Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking, secretion, and vesicular transport]; Region: SecA; COG0653" /db_xref="CDD:440418" gene complement(4936750..4937673) /locus_tag="PA4404" /db_xref="GeneID:881308" CDS complement(4936750..4937673) /locus_tag="PA4404" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253094.1" /db_xref="GeneID:881308" /translation="MHIIFLSRHHGAARSVHLQPRLLMLAGACVVGASLLAGGFMGAW LFRAPAPVAGIEVDAALQAQSAEISSAREDAQRQMDALSVHLGELQARLVRLDALGER LTELADVDPDEFDFSLSVGQGGVDEPLEGSAYAPPSFMATLDELAARLDTREQQLEVL EQLLADKHISQSTYLAGQPVRQGYISSPFGRRVNPVSGRLSMHKGIDFAAPAGSDVVA VAAGVVTWSGRKNGYGNVVEVGHADGYTTLYAHNQKNLVEVGDLVKRGQVLAKVGSTG RSTGYHVHFEVMKDGRVMNPQSFIARASVSE" misc_feature complement(4936771..4937253) /locus_tag="PA4404" /note="Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain [Cell wall/membrane/envelope biogenesis]; Region: NlpD; COG0739" /db_xref="CDD:440502" gene 4937820..4938215 /locus_tag="PA4405" /db_xref="GeneID:881291" CDS 4937820..4938215 /locus_tag="PA4405" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253095.1" /db_xref="GeneID:881291" /translation="MLFAEAQRICRLQQLLESQLQPAARPYCHVASWRGGCLLLIVTD GHWATRLRYQQRRLQRQLQAFEEFANLAKILFKVQPTTSTQRAARRSLTLSAVAAENL RESAEIVGNPRLREALERLASRAEKSRQE" misc_feature <4937883..4938194 /locus_tag="PA4405" /note="Uncharacterized conserved protein [Function unknown]; Region: COG4701" /db_xref="CDD:443736" gene complement(4938276..4939187) /gene="lpxC" /locus_tag="PA4406" /db_xref="GeneID:881292" CDS complement(4938276..4939187) /gene="lpxC" /locus_tag="PA4406" /EC_number="3.5.1.-" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase" /protein_id="NP_253096.1" /db_xref="GeneID:881292" /translation="MIKQRTLKNIIRATGVGLHSGEKVYLTLKPAPVDTGIVFCRTDL DPVVEIPARAENVGETTMSTTLVKGDVKVDTVEHLLSAMAGLGIDNAYVELSASEVPI MDGSAGPFVFLIQSAGLQEQEAAKKFIRIKREVSVEEGDKRAVFVPFDGFKVSFEIDF DHPVFRGRTQQASVDFSSTSFVKEVSRARTFGFMRDIEYLRSQNLALGGSVENAIVVD ENRVLNEDGLRYEDEFVKHKILDAIGDLYLLGNSLIGEFRGFKSGHALNNQLLRTLIA DKDAWEVVTFEDARTAPISYMRPAAAV" misc_feature complement(4938351..4939184) /gene="lpxC" /locus_tag="PA4406" /note="UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell wall/membrane/envelope biogenesis]; Region: LpxC; COG0774" /db_xref="CDD:440537" gene complement(4939194..4939277) /locus_tag="PA4406.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /db_xref="GeneID:9793396" ncRNA complement(4939194..4939277) /ncRNA_class="other" /locus_tag="PA4406.1" /note="Not available" /db_xref="GeneID:9793396" gene complement(4939300..4940484) /gene="ftsZ" /locus_tag="PA4407" /db_xref="GeneID:881296" CDS complement(4939300..4940484) /gene="ftsZ" /locus_tag="PA4407" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cell division protein FtsZ" /protein_id="NP_253097.1" /db_xref="GeneID:881296" /translation="MFELVDNIAQTAVIKVIGVGGGGGNAVNHMAKNNVEGVEFICAN TDAQALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERISEVLEGADMVFIT TGMGGGTGTGAAPIIAEVAKEMGILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDS LITIPNEKLLTILGKDASLLAAFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTVM SEMGMAMMGTGCASGPNRAREATEAAIRNPLLEDVNLQGARGILVNITAGPDLSLGEY SDVGNIIEQFASEHATVKVGTVIDADMRDELHVTVVATGLGARLEKPVKVVDNTVQGS AAQAAAPAQREQQSVNYRDLDRPTVMRNQSHGSAATAAKLNPQDDLDYLDIPAFLRRQ AD" misc_feature complement(4939402..4940412) /gene="ftsZ" /locus_tag="PA4407" /note="Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning]; Region: FtsZ; COG0206" /db_xref="CDD:439976" gene complement(4940535..4941788) /gene="ftsA" /locus_tag="PA4408" /db_xref="GeneID:881321" CDS complement(4940535..4941788) /gene="ftsA" /locus_tag="PA4408" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cell division protein FtsA" /protein_id="NP_253098.1" /db_xref="GeneID:881321" /translation="MASVQSGKMIVGLDIGTSKVVALVGEVTADGQLEVVGIGTHPSR GLKKGVVVNIESTVQSIQRAIDEAQQMAGCRIHSAFVGIAGNHIRSLNSHGIVAIRDR EVNPADIERVLDAAQAVAIPADQRVLHTLAQDYVIDNQEGVREPLGMSGVRLEAKVHV VTCAVNASQNIEKCVRRCGLEVDDIILEQLASAYSVLTEDEKELGVCLVDIGGGTTDI AIFTEGAIRHTAVIPIAGDQVTNDIAMALRTPTQYAEEIKIRYACALAKLAGAGETIK VPSVGDRPPRELSRQALAEVVEPRYDELFTLVQAELRRSGYEDLIPAGIVLTGGTSKM EGAVELAEEIFHMPVRLGVPYSVKGLTDVVRNPIYSTGVGLLMYGLQKQSDGMSMSVS GSSYSSDEPKAPVLERLKRWVQGNF" misc_feature complement(4940553..4941767) /gene="ftsA" /locus_tag="PA4408" /note="Cell division ATPase FtsA [Cell cycle control, cell division, chromosome partitioning]; Region: FtsA; COG0849" /db_xref="CDD:440610" protein_bind 4941690..4941702 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 4941697..4941709 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(4941810..4942673) /gene="ftsQ" /locus_tag="PA4409" /db_xref="GeneID:881322" CDS complement(4941810..4942673) /gene="ftsQ" /locus_tag="PA4409" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cell division protein FtsQ" /protein_id="NP_253099.1" /db_xref="GeneID:881322" /translation="MNGVLLRHQQPGGLGRAPRKPMPRGASRLVAKEPLSVRLPKADF SFLKYLAWPLLLAVLGYGAYRGAEYILPYADRPIAKVSVEGDLSYISQRAVQQRISPY LAASFFTIDLAGMRGQLEQMPWIAHAEVRRVWPDQVVIRLDEQLPIARWGDEALLNNQ GQAFTPKELANYEHLPRLHGPQRAQQQVMQQYQLLSQLLRPLGFSIARLEMSDRGGWA LTTAQGVEIQIGRDHVVDKIRRFVSIYDKALKDQISNIARIDLRYPNGLAVAWREPVT PATVATASAVQ" misc_feature complement(4941843..4942535) /gene="ftsQ" /locus_tag="PA4409" /note="Cell division septal protein FtsQ [Cell cycle control, cell division, chromosome partitioning]; Region: FtsQ; COG1589" /db_xref="CDD:441197" gene complement(4942677..4943636) /gene="ddlB" /locus_tag="PA4410" /db_xref="GeneID:881282" CDS complement(4942677..4943636) /gene="ddlB" /locus_tag="PA4410" /EC_number="6.3.2.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="D-alanine--D-alanine ligase" /protein_id="NP_253100.1" /db_xref="GeneID:881282" /translation="MNLCLDSLLNGTQDPKAFGRVAVLFGGKSAEREVSLKSGAMVLQ SLLAAGVDAFGIDVGEDLLQRLVEEKIDRAFIILHGRGGEDGSMQGLLECAGIPYTGS GVLASALAMDKLRTKRVWLSLGLPTPDYAVLASEDDCREAAQRLGFPLIVKPAHEGSS IGMAKVGGLDELIAAWREAARYDSQVLVEQWISGPEFTVATLRGQVLPAIRLGTPHTF YDYDAKYLASDTRYQVPCGLDEAKERELKELTARACDALGIQGWGRADVMQDAEGRFW LLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAILADSREARG" misc_feature complement(4942683..4943594) /gene="ddlB" /locus_tag="PA4410" /note="D-alanine--D-alanine ligase; Reviewed; Region: ddl; PRK01372" /db_xref="CDD:234948" gene complement(4943633..4945075) /gene="murC" /locus_tag="PA4411" /db_xref="GeneID:881283" CDS complement(4943633..4945075) /gene="murC" /locus_tag="PA4411" /EC_number="6.3.2.8" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramate--L-alanine ligase" /protein_id="NP_253101.1" /db_xref="GeneID:881283" /translation="MVKEPNGVTRTMRRIRRIHFVGIGGAGMCGIAEVLLNLGYEVSG SDLKASAVTERLEKFGAQIFIGHQAENADGADVLVVSSAINRANPEVASALERRIPVV PRAEMLAELMRYRHGIAVAGTHGKTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQ LGASRYLVAEADESDASFLHLQPMVAVVTNIDADHMATYGGDFNKLKKTFVEFLHNLP FYGLAVMCVDDPVVREILPQIARPTVTYGLSEDADVRAINIRQEGMRTWFTVLRPERE PLDVSVNMPGLHNVLNSLATIVIATDEGISDEAIVQGLSGFQGVGRRFQVYGELQVEG GSVMLVDDYGHHPREVAAVIKAIRGGWPERRLVMVYQPHRYTRTRDLYEDFVQVLGEA NVLLLMEVYPAGEEPIPGADSRQLCHSIRQRGQLDPIYFERDADLAPLVKPLLRAGDI LLCQGAGDVGGLAPQLIKNPLFAGKGGKGA" misc_feature complement(4943672..4945021) /gene="murC" /locus_tag="PA4411" /note="UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family [Cell wall/membrane/envelope biogenesis]; Region: MurC; COG0773" /db_xref="CDD:440536" gene complement(4945068..4946141) /gene="murG" /locus_tag="PA4412" /db_xref="GeneID:881264" CDS complement(4945068..4946141) /gene="murG" /locus_tag="PA4412" /EC_number="2.4.1.227" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase" /protein_id="NP_253102.1" /db_xref="GeneID:881264" /translation="MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIEN DLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSLFQALRVIRQLRPVCVLGLGGY VTGPGGLAARLNGVPLVIHEQNAVAGTANRSLAPIARRVCEAFPDTFPASDKRLTTGN PVRGELFLDAHARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQA GRQHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAF LVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQ ARSLAKPEATRTVVDACLEVARG" misc_feature complement(4945071..4946138) /gene="murG" /locus_tag="PA4412" /note="undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional; Region: murG; PRK00726" /db_xref="CDD:234825" gene complement(4946131..4947330) /gene="ftsW" /locus_tag="PA4413" /db_xref="GeneID:881267" CDS complement(4946131..4947330) /gene="ftsW" /locus_tag="PA4413" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cell division protein FtsW" /protein_id="NP_253103.1" /db_xref="GeneID:881267" /translation="MLSVLRPFPSPLLSRHGIDLDFPLLAGCLALLGLGLVMVTSASS EVAAAQSGNPLYFSVRHLIYLVIGLISCGLTMMVPMATWQRWGWKLLLVAFGLLVLVI TPGIGREVNGSMRWIGFGLFNIQPSEIAKVCVVIFMAGYLIRRQQEVRESWMGFFKPF VVLLPMAGLLLREPDFGATVVMMGAAAAMLFLGGVGLFRFGLMVLLAVGAVVLLIQTQ PYRMARLTNFTDPWADQFGAGYQLSQALIAFGRGGWLGMGLGNSIQKQFYLPEAHTDF VFAVLAEELGIVGALATVALFVFVSLRALYIGIWAEQAKQFFSAYVAYGLAFLWIGQF LINIGVNVGLLPTKGLTLPFLSYGGSSLVICCACLGMLLRIEWERRTHLGSEEYEFNE EDFADER" misc_feature complement(4946194..4947222) /gene="ftsW" /locus_tag="PA4413" /note="cell division protein FtsW; Region: ftsW; TIGR02614" /db_xref="CDD:274232" gene complement(4947330..4948676) /gene="murD" /locus_tag="PA4414" /db_xref="GeneID:881268" CDS complement(4947330..4948676) /gene="murD" /locus_tag="PA4414" /EC_number="6.3.2.9" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase" /protein_id="NP_253104.1" /db_xref="GeneID:881268" /translation="MSLIASDHFRIVVGLGKSGMSLVRYLARRGLPFAVVDTRENPPE LATLRAQYPQVEVRCGELDAEFLCSARELYVSPGLSLRTPALVQAAAKGVRISGDIDL FAREAKAPIVAITGSNAKSTVTTLVGEMAVAADKRVAVGGNLGTPALDLLADDIELYV LELSSFQLETCDRLNAEVATVLNVSEDHMDRYDGMADYHLAKHRIFRGARQVVVNRAD ALTRPLIADTVPCWSFGLNKPDFKAFGLIEEDGQKWLAFQFDKLLPVGELKIRGAHNY SNALAALALGHAVGLPFDAMLGALKAFSGLAHRCQWVRERQGVSYYDDSKATNVGAAL AAIEGLGADIDGKLVLLAGGDGKGADFHDLREPVARFCRAVVLLGRDAGLIAQALGNA VPLVRVATLDEAVRQAAELAREGDAVLLSPACASLDMFKNFEERGRLFAKAVEELA" misc_feature complement(4947333..4948643) /gene="murD" /locus_tag="PA4414" /note="UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; Region: MurD; COG0771" /db_xref="CDD:440534" gene complement(4948690..4949772) /gene="mraY" /locus_tag="PA4415" /db_xref="GeneID:881288" CDS complement(4948690..4949772) /gene="mraY" /locus_tag="PA4415" /EC_number="2.7.8.13" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phospho-N-acetylmuramoyl-pentapeptide- transferase" /protein_id="NP_253105.1" /db_xref="GeneID:881288" /translation="MLLLLAEYLQQFYKGFGVFQYLTLRGILSVLTALSLSLWLGPWM IRTLQIRQIGQAVRNDGPQSHLSKKGTPTMGGALILTAIAISTLLWADLSNRYVWVVL VVTLLFGAIGWVDDYRKVIEKNSRGLPSRWKYFWQSVFGIGAAVFLYMTAETPIETTL IVPMLKSVEIQLGIFFVVLTYFVIVGSSNAVNLTDGLDGLAIMPTVMVAGALGIFCYL SGNVKFAEYLLIPNVPGAGELIVFCAALVGAGLGFLWFNTYPAQVFMGDVGALALGAA LGTIAVIVRQEIVLFIMGGVFVMETLSVMIQVASFKLTGRRVFRMAPIHHHFELKGWP EPRVIVRFWIITVILVLIGLATLKLR" misc_feature complement(4948693..4949664) /gene="mraY" /locus_tag="PA4415" /note="Glycosyltransferase 4 (GT4) includes both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine:polyprenol phosphate D-N-acetylhexosamine-1-phosphate transferases. They catalyze the transfer of a D-N-acetylhexosamine 1-phosphate to a membrane-bound...; Region: GT_MraY-like; cl10571" /db_xref="CDD:471988" misc_feature complement(4949425..4949430) /gene="mraY" /locus_tag="PA4415" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:133462" misc_feature complement(4948972..4948983) /gene="mraY" /locus_tag="PA4415" /note="putative catalytic motif [active]" /db_xref="CDD:133462" misc_feature complement(order(4948792..4948806,4948822..4948824)) /gene="mraY" /locus_tag="PA4415" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:133462" gene complement(4949772..4951148) /gene="murF" /locus_tag="PA4416" /db_xref="GeneID:881289" CDS complement(4949772..4951148) /gene="murF" /locus_tag="PA4416" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase" /protein_id="NP_253106.1" /db_xref="GeneID:881289" /translation="MLEPLRLSQLTVALDARLIGEDAVFSAVSTDSRAIGPGQLFIAL SGPRFDGHDYLAEVAAKGAVAALVEREVADAPLPQLLVRDTRAALGRLGALNRRKFTG PLAAMTGSSGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLTLLQLAPQHRS AVIELGASRIGEIAYTVELTRPHVAIITNAGTAHVGEFGGPEKIVEAKGEILEGLAAD GTAVLNLDDKAFDTWKARASGRPLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAG EAQVQLNLLGRHNVANALAAAAAAHALGVPLDGIVAGLQALQPVKGRAVAQLTASGLR VIDDSYNANPASMLAAIDILSGFSGRTVLVLGDMGELGSWAEQAHREVGAYAAGKVSA LYAVGPLMAHAVQAFGATGRHFADQASLIGALATEQPTTTILIKGSRSAAMDKVVAAL CGSSEESH" misc_feature complement(4949784..4951139) /gene="murF" /locus_tag="PA4416" /note="UDP-N-acetylmuramyl pentapeptide synthase [Cell wall/membrane/envelope biogenesis]; Region: MurF; COG0770" /db_xref="CDD:440533" gene complement(4951141..4952604) /gene="murE" /locus_tag="PA4417" /db_xref="GeneID:881246" CDS complement(4951141..4952604) /gene="murE" /locus_tag="PA4417" /EC_number="6.3.2.13" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase" /protein_id="NP_253107.1" /db_xref="GeneID:881246" /translation="MPMSLNQLFPQAERDLLIRELTLDSRGVRPGDLFLAVPGGRQDG RAHIADALAKGAAAVAYEAEGAGELPPSDAPLIAVKGLAAQLSAVAGRFYGEPSRGLD LIGVTGTNGKTSVSQLVAQALDLLGERCGIVGTLGTGFYGALESGRHTTPDPLAVQAT LATLKQAGARAVAMEVSSHGLDQGRVAALGFDIAVFTNLSRDHLDYHGSMEAYAAAKA KLFAWPGLRCRVINLDDDFGRRLAGEEQDSELITYSLTDSSAFLYCREARFGDAGIEA ALVTPHGEGLLRSPLLGRFNLSNLLAAVGALLGLGYPLGDILRTLPQLQGPVGRMQRL GGGDKPLVVVDYAHTPDALEKVLEALRPHAAARLLCLFGCGGDRDAGKRPLMAAIAER LADEVLVTDDNPRTEASAAIIADIRKGFAAADKVTFLPSRGEAIAHLIASAAVDDVVL LAGKGHEDYQEIDGVRHPFSDIEQAERALAAWEVPHA" misc_feature complement(4951162..4952544) /gene="murE" /locus_tag="PA4417" /note="UDP-N-acetylmuramyl tripeptide synthase [Cell wall/membrane/envelope biogenesis]; Region: MurE; COG0769" /db_xref="CDD:440532" gene complement(4952604..4954343) /gene="ftsI" /locus_tag="PA4418" /db_xref="GeneID:881247" CDS complement(4952604..4954343) /gene="ftsI" /locus_tag="PA4418" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 3" /protein_id="NP_253108.1" /db_xref="GeneID:881247" /translation="MKLNYFQGALYPWRFCVIVGLLLAMVGAIVWRIVDLHVIDHDFL KGQGDARSVRHIAIPAHRGLITDRNGEPLAVSTPVTTLWANPKELMTAKERWPQLAAA LGQDTKLFADRIEQNAEREFIYLVRGLTPEQGEGVIALKVPGVYSIEEFRRFYPAGEV VAHAVGFTDVDDRGREGIELAFDEWLAGVPGKRQVLKDRRGRVIKDVQVTKNAKPGKT LALSIDLRLQYLAHRELRNALLENGAKAGSLVIMDVKTGEILAMTNQPTYNPNNRRNL QPAAMRNRAMIDVFEPGSTVKPFSMSAALASGRWKPSDIVDVYPGTLQIGRYTIRDVS RNSRQLDLTGILIKSSNVGISKIAFDIGAESIYSVMQQVGLGQDTGLGFPGERVGNLP NHRKWPKAETATLAYGYGLSVTAIQLAHAYAALANDGKSVPLSMTRVDRVPDGVQVIS PEVASTVQGMLQQVVEAQGGVFRAQVPGYHAAGKSGTARKVSVGTKGYRENAYRSLFA GFAPATDPRIAMVVVIDEPSKAGYFGGLVSAPVFSKVMAGALRLMNVPPDNLPTATEQ QQVNAAPAKGGRG" misc_feature complement(4952676..4954319) /gene="ftsI" /locus_tag="PA4418" /note="Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis]; Region: FtsI; COG0768" /db_xref="CDD:440531" gene complement(4954340..4954633) /gene="ftsL" /locus_tag="PA4419" /db_xref="GeneID:881233" CDS complement(4954340..4954633) /gene="ftsL" /locus_tag="PA4419" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cell division protein FtsL" /protein_id="NP_253109.1" /db_xref="GeneID:881233" /translation="MSRLFVKRLPTGSFLMLLLYIGLLLSAIAVAYSTYWNRQLLNSL YSELSVRDKAQAEWGRLILEQSTWTAHSRIESLAVEQLRMRVPDPAEVRMVAP" misc_feature complement(4954343..4954633) /gene="ftsL" /locus_tag="PA4419" /note="Cell division protein FtsL; Region: FtsL; pfam04999" /db_xref="CDD:428249" protein_bind 4954341..4954353 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4418" /bound_moiety="AmrZ" gene complement(4954630..4955571) /locus_tag="PA4420" /db_xref="GeneID:881254" CDS complement(4954630..4955571) /locus_tag="PA4420" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="S-adenosyl-methyltransferase MraW" /protein_id="NP_253110.1" /db_xref="GeneID:881254" /translation="MNATYRHITVLLEEAVSALAPREDGCYLDGTFGRGGHSRALLEK LGAGGRLLGFDKDPQAIQTGKALAAEDGRFVIVQRSFAELGDEVRARGLEGRVDGVLL DLGVSSPQLDDPERGFSFLNDGPLDMRMNPGQGISAAEFIANATEEEIARVFKEYGEE RFAKRMARAIVQRRQERPFERTADLAEVITVANPAWEKGKNPATRAFQGLRIHVNNEL GDLERGLDAALESLAVGGRLVVISFHSLEDRIVKLFMRKHAKGEADNLPRDLPIRSKV FEPRLKLLGKPQYASEEELKANPRSRSAVMRVAEKLR" misc_feature complement(4954636..4955571) /locus_tag="PA4420" /note="16S rRNA C1402 N4-methylase RsmH [Translation, ribosomal structure and biogenesis]; Region: RmsH; COG0275" /db_xref="CDD:440044" gene complement(4955574..4956029) /locus_tag="PA4421" /db_xref="GeneID:881255" CDS complement(4955574..4956029) /locus_tag="PA4421" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="cell division protein MraZ" /protein_id="NP_253111.1" /db_xref="GeneID:881255" /translation="MFRGANAISLDAKGRLAMPSRYRDELVSRCAGQLIVTIDAVDPC LTVYPLPEWELIEAKLRELPSLREETRRLQRLLIGNAVDLELDGNGRFLIPPRLREYA KLDKRAMLVGQLNKFQLWDEDAWNAMAEADLAAIKQPGGLPDELRDLIL" misc_feature complement(4955625..4956029) /locus_tag="PA4421" /note="transcriptional regulator MraZ; Region: PRK00326" /db_xref="CDD:234728" misc_feature complement(order(4955643..4955645,4955652..4955657, 4955682..4955684,4955703..4955705,4955787..4955789, 4955793..4955795)) /locus_tag="PA4421" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:293784" misc_feature complement(4955757..4955771) /locus_tag="PA4421" /note="DXXXR [structural motif]; Region: DXXXR" /db_xref="CDD:293784" protein_bind 4955968..4955980 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 4956179..4956192 /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" protein_bind 4956247..4956260 /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" gene 4956328..4956536 /gene="rnpB" /locus_tag="PA4421.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965619" ncRNA 4956328..4956536 /ncRNA_class="RNase_P_RNA" /gene="rnpB" /locus_tag="PA4421.1" /product="RNA component of RNaseP, RnpB" /db_xref="GeneID:6965619" gene complement(4956734..4957582) /locus_tag="PA4422" /db_xref="GeneID:881235" CDS complement(4956734..4957582) /locus_tag="PA4422" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253112.1" /db_xref="GeneID:881235" /translation="MSAGTLFVVATPIGNLDDISPRALRVLREVALVAAEDTRHSIRL FQHFGIETPLAACHEHNEREEGGRFISRLQGGEDVALISDAGTPLISDPGFHLVRQAQ ALGIRVVPVPGSCALIAALSAAGLPSDRFIFEGFLPAKAAGRRSRLQAVQEEPRTLIF YEAPHRLLESLADMRDVFGGERRAVLARELSKTFETIRSLPLAELHDWVASDSNQQRG ECVVLVAGWQAPEGEESIGAEALRVLDLLLAELPLKKAAALAAEITGVRKNLLYQQAL QRQGKS" misc_feature complement(4956905..4957567) /locus_tag="PA4422" /note="16S rRNA C1402 (ribose-2'-O) methylase RsmI [Translation, ribosomal structure and biogenesis]; Region: RsmI; COG0313" /db_xref="CDD:440082" protein_bind complement(4957432..4957444) /locus_tag="PA4422" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 4957709..4959523 /locus_tag="PA4423" /db_xref="GeneID:881236" CDS 4957709..4959523 /locus_tag="PA4423" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253113.1" /db_xref="GeneID:881236" /translation="MIACLRPLSALILAGLLTACATSSNSGLGELPRTPNASIEQLLQ QASQSKPEEAALLRLSAADLAYQQKDLARSTAILGQIPLESLKPAQQVFASTLNAELA LARSKPKAALQALQHPSMQHLSELPVTQQVRTQRAKAQALAADGQVLAAAKERIYFAP LLEGPAVIENQEKIWTLVSSLPVDQLQPSANEGDLSGWLTLARITKTSPTLQQQQASI ESWQQQNPEHPAAKHLPAALEKLKTLSQQPLTRIALLLPQQGQLANVARALQDGFLAA HFQAQQAGQNPPSIKLYDSTQVRSLDDFYRQAQADGVELVVGPLEKPLVKQLASREQL PITTLALNYSDNSQEGPAQLFQFGLAAEDEARAVASRAWGDGMRRAVALVPRGEWGDR VLAAFSQSWQSAGGSLIAAEHVDQPVQLAQQIADLLQLRQSEGRAQRLQGALGSQIAT QPSRRQDIDFVFLAATPQQARQIKPTLAFQYAGDLPVYATSHLYTGTNNPTQDQDLNG IRFCETPWLLNPSDPTRQQVAAQWPQANGSMGRLYAMGVDAYRLAPRLPELKAVPSLQ IDGLTGTLSLNPTQRIERQLQWAEFRNGQVQPLGTSSF" misc_feature 4957805..4959487 /locus_tag="PA4423" /note="LppC putative lipoprotein; Region: LppC; pfam04348" /db_xref="CDD:367906" gene 4959520..4959897 /locus_tag="PA4424" /db_xref="GeneID:881195" CDS 4959520..4959897 /locus_tag="PA4424" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253114.1" /db_xref="GeneID:881195" /translation="MTDRESSRDKGRQAEELACAHLRRQGLATLGKNWTCRRGELDLV MLDGDTVVFVEVRSRRHRAWGGALESIDARKRQRLILSAELFLQQEARWAKRPCRFDV VTVDTSDGQSPPRLDWIQNAFDA" misc_feature 4959535..4959894 /locus_tag="PA4424" /note="YraN family protein; Region: PRK12497" /db_xref="CDD:237119" gene 4959926..4960519 /locus_tag="PA4425" /db_xref="GeneID:881196" CDS 4959926..4960519 /locus_tag="PA4425" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="phosphoheptose isomerase" /protein_id="NP_253115.1" /db_xref="GeneID:881196" /translation="MDMQHRIRQLFQASIETKQQALEVLPPYIEQASLVMVNALLNEG KILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVALTTDSSTITSIANDYSYNEVFS KQIRALGQPGDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLLPED VEIRVPSKITARIQEVHLLAIHCLCDLIDRQLFGSEE" misc_feature 4959926..4960516 /locus_tag="PA4425" /note="phosphoheptose isomerase; Provisional; Region: PRK13936" /db_xref="CDD:237567" misc_feature order(4959965..4959967,4959977..4959979,4960013..4960015, 4960022..4960024,4960082..4960084,4960100..4960105, 4960445..4960450,4960460..4960462,4960469..4960471, 4960481..4960483,4960493..4960495) /locus_tag="PA4425" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:240139" misc_feature order(4960076..4960084,4960280..4960288,4960295..4960297, 4960433..4960435,4960445..4960447) /locus_tag="PA4425" /note="active site" /db_xref="CDD:240139" gene 4960516..4961094 /locus_tag="PA4426" /db_xref="GeneID:881225" CDS 4960516..4961094 /locus_tag="PA4426" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253116.1" /db_xref="GeneID:881225" /translation="MSRTAFVAATLALSLALGGCSSFLSATRDKPIDDDRGTRTIGSK IDDSLIETKAAVNIAKADPALDKDSHIVVVSYNGIVLIAGQTPRADLKSKAEQAARTV QKVKNVHNELQVTSPSSLLARNNDAWITTKLKTQMLSDPNVPSSRIKVVTENGIVYMM GLVNQQEAAQAVRVAQGVDGVQKIVKLFEYIN" misc_feature 4960609..4961082 /locus_tag="PA4426" /note="Osmotically-inducible protein OsmY, contains BON domain [Cell wall/membrane/envelope biogenesis]; Region: OsmY; COG2823" /db_xref="CDD:442071" gene complement(4961151..4961558) /gene="sspB" /locus_tag="PA4427" /db_xref="GeneID:881226" CDS complement(4961151..4961558) /gene="sspB" /locus_tag="PA4427" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ClpXP protease specificity-enhancing factor" /protein_id="NP_253117.1" /db_xref="GeneID:881226" /translation="MNSSRPYLVRALYEWIVDNDCTPHILVNAEFAGVKVPPGYASDG QIVLNVSPSAVRHLHMDNEAVSFEGRFGGVAQSLYIPALAVMAIYARENGQGMVFDLE QPGPVDDEPGDDDGGPSDEPPRPSGRPSLKVVK" misc_feature complement(4961154..4961558) /gene="sspB" /locus_tag="PA4427" /note="ClpXP protease specificity-enhancing factor; Provisional; Region: PRK11798" /db_xref="CDD:236987" gene complement(4961570..4962187) /gene="sspA" /locus_tag="PA4428" /db_xref="GeneID:881209" CDS complement(4961570..4962187) /gene="sspA" /locus_tag="PA4428" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="stringent starvation protein A" /protein_id="NP_253118.1" /db_xref="GeneID:881209" /translation="MASINKLTCYSDPADHYCHRIRLVLAEKNVAVEVIDIEAGRCPP MLAEVNPYGSVPTLVDRDLALYEPTVVMEYLDERYPHPPLLPDYPVKRANSRLLIHRI QRDWCSLVDRILDARSKEAERVQARKELRESLTGVSPLFADKAYFLSEDFSLVDCCLL PILWRLPLLGIELPRQAKPLLDYMERGFARESFRASLSSVERDMR" misc_feature complement(4961573..4962169) /gene="sspA" /locus_tag="PA4428" /note="stringent starvation protein A; Provisional; Region: sspA; PRK09481" /db_xref="CDD:236537" gene complement(4962273..4963055) /locus_tag="PA4429" /db_xref="GeneID:881210" CDS complement(4962273..4963055) /locus_tag="PA4429" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cytochrome C1" /protein_id="NP_253119.1" /db_xref="GeneID:881210" /translation="MKKQFAALILAVLPVLGFAAGGHGPQLDHVDIDLTDKAAMQDGA RTFANYCMGCHSAKFQRYERVATDLGIPADLMMEKLVFTGAKIGDHMDIGMKPADAKT WFGAAPPDLTLVARVRGTDWLYSYLRSFYEDPKRPWGVNNVIFPNVGMPNVLAPLQGR QVIGCKQVQVVEDGKKQFDPLTGTPLTHEACDQLTVVPKTGELNEAQFDEKVKNLVTF LAYSANPNKLASERIGTYVLLYLAFFFVFAYLLKREYWKDVH" misc_feature complement(4962276..4963019) /locus_tag="PA4429" /note="Cytochrome c1 [Energy production and conversion]; Region: CYT1; COG2857" /db_xref="CDD:442105" gene complement(4963055..4964266) /locus_tag="PA4430" /db_xref="GeneID:880944" CDS complement(4963055..4964266) /locus_tag="PA4430" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cytochrome b" /protein_id="NP_253120.1" /db_xref="GeneID:880944" /translation="MNKFMAWVDARFPATKMWEDHLSKYYAPKNFNFWYFFGSLALLV LVNQILTGIWLTMSFTPSAEEAFASVEYIMRDVDYGWIIRYMHSTGASAFFIVVYLHM FRGLLYGSYQKPRELVWIFGMLIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIP VVGEDLAQWIRGDFLISGITLNRFFALHVIALPIVLLGLVVLHILALHEVGSNNPDGV DIKKKKDENGVPLDGIAFHPYYTVKDIVGVVVFLFIFCTVIFFFPEMGGYFLEKPNFE MANQFKTPEHIAPVWYFTPFYAILRAVPDKLMGVVAMGAAIAVLFVLPWLDRSPVRSI RYKGWLSKLWLVIFAVSFVILGYYGAQAPSPLGTTLSRVCTVLYFAFFILMPFYTRME KTKPVPERVTG" misc_feature complement(4963073..4964266) /locus_tag="PA4430" /note="Cytochrome b subunit of the bc complex [Energy production and conversion]; Region: QcrB/PetB; COG1290" /db_xref="CDD:440901" gene complement(4964266..4964859) /locus_tag="PA4431" /db_xref="GeneID:880945" CDS complement(4964266..4964859) /locus_tag="PA4431" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="iron-sulfur protein" /protein_id="NP_253121.1" /db_xref="GeneID:880945" /translation="MSNDGVNAGRRRFLVAATSVVGAAGAVGAAVPFVGSWFPSAKAK AAGAPVQVNVGKIDPGQQIIAEWRGKPVFIVHRTKEMLDALPSLEGQLADPDSKASEQ PEYVDPKLRSIKPELAVIVGICTHLGCSPTFRPEVAPADLGPDWKGGYFCPCHGSHYD LAGRVYKGQPAPLNLPIPPYTFDADDVITIGVDQEKA" misc_feature complement(4964287..4964835) /locus_tag="PA4431" /note="ubiquinol-cytochrome c reductase, iron-sulfur subunit; Region: Rieske_proteo; TIGR01416" /db_xref="CDD:273610" gene complement(4965109..4965501) /gene="rpsI" /locus_tag="PA4432" /db_xref="GeneID:881274" CDS complement(4965109..4965501) /gene="rpsI" /locus_tag="PA4432" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S9" /protein_id="NP_253122.1" /db_xref="GeneID:881274" /translation="MSATQNYGTGRRKTATARVFLRPGTGKISINNRGLDQFFGRETA RMVVRQPLELTETVEKFDIFVTVVGGGVSGQAGAIRHGITRALIEYDETLRSSLRKAG YVTRDAREVERKKVGLRKARKRPQYSKR" misc_feature complement(4965112..4965501) /gene="rpsI" /locus_tag="PA4432" /note="30S ribosomal protein S9; Reviewed; Region: rpsI; PRK00132" /db_xref="CDD:178888" gene complement(4965516..4965944) /gene="rplM" /locus_tag="PA4433" /db_xref="GeneID:881275" CDS complement(4965516..4965944) /gene="rplM" /locus_tag="PA4433" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L13" /protein_id="NP_253123.1" /db_xref="GeneID:881275" /translation="MKTYTAKPETVQRDWFVVDAAGQTLGRLATEIARRLRGKHKPEY TPHVDTGDYIVVINAEQVRVTGAKTTDKMYYHHSGFPGGIKSINFEKLIAKAPERVIE TAVKGMLPKNPLGRDMYRKLKVYKGASHPHTAQQPQELKI" misc_feature complement(4965519..4965932) /gene="rplM" /locus_tag="PA4433" /note="Ribosomal protein L13 [Translation, ribosomal structure and biogenesis]; Region: RplM; COG0102" /db_xref="CDD:439872" gene 4966190..4967227 /locus_tag="PA4434" /db_xref="GeneID:880942" CDS 4966190..4967227 /locus_tag="PA4434" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_253124.1" /db_xref="GeneID:880942" /translation="MEYRPLGRTDLKVSALCLGTMTWGEQNSEQDAFAQIARAKAAGI NFMDTAEMYPVPPRAETYASTERIIGNWFRRSGDRADWILASKIAGPGNGISHVRDGN LKFNRQHIVAALDASLERLQTDWLDLYQLHWPERRTNFFGQLGYQHQEESFTPLEETL EVLDEQVRAGKIRHIGLSNETPWGTMTFLRLAEERGWPRAVSIQNPYNLLNRSFEVGL AEIAIREQCGLLAYSPMAFGMLSGKYADGARPANARISLYSRFTRYTNPQAEAACARY VALAREHGLEPAQMALAYVTSRPFVTSNIIGATSLEQLETNLGSVDLRLDEEVLAGID AIHREQPNPAP" misc_feature 4966226..4967197 /locus_tag="PA4434" /note="Escherichia coli Tas protein and similar proteins; Region: AKR_Tas-like; cd19094" /db_xref="CDD:381320" misc_feature order(4966244..4966252,4966265..4966267,4966331..4966333, 4966346..4966348,4966448..4966450,4966583..4966585, 4966721..4966726,4966799..4966801,4966883..4966903, 4966910..4966912,4966916..4966918,4966943..4966951, 4967051..4967053,4967102..4967116,4967126..4967128, 4967138..4967140) /locus_tag="PA4434" /note="active site" /db_xref="CDD:381320" misc_feature order(4966331..4966333,4966346..4966348,4966448..4966450, 4966583..4966585) /locus_tag="PA4434" /note="catalytic tetrad [active]" /db_xref="CDD:381320" gene complement(4967313..4968458) /locus_tag="PA4435" /db_xref="GeneID:880943" CDS complement(4967313..4968458) /locus_tag="PA4435" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_253125.1" /db_xref="GeneID:880943" /translation="MTTMIPRTLFSSDHELFRDSVRKFLEQEAVPFHHQWEKDGHVDR ALWNKAGEAGMLCSHLPEEYGGMGADFLYSAVVIEEIGRAGLTGIGFSLHSDIAAPYI LHYGSEALKRKYLPKLVSGEMVAAIAMTEPGAGSDLQGVKTTAVLDGDEYVINGSKTF ITNGFLADLVIVVAKTDPKAGAKGISLFVVEAGTPGFSKGKRLEKVGMKAQDTSELFF QDVRIPRENLLGKDGQGFIYLMQELPQERLTVGIGALASAEAALQWTLDYTRERKAFG KSVADFQNTRFKLAEMATEIQVGRVFVDRCMELHLQGKLDVPTAAMCKYWTTDLQCKV LDECVQLHGGYGFMWEYPVARAWADARVQRIYAGTNEIMKEIIARAL" misc_feature complement(4967316..4968422) /locus_tag="PA4435" /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933" /db_xref="CDD:447864" misc_feature complement(order(4967349..4967351,4967355..4967357, 4967361..4967369,4967973..4967975,4967979..4967981, 4968072..4968074,4968078..4968080,4968168..4968170)) /locus_tag="PA4435" /note="active site" /db_xref="CDD:173838" gene 4968712..4969611 /locus_tag="PA4436" /db_xref="GeneID:880951" CDS 4968712..4969611 /locus_tag="PA4436" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253126.1" /db_xref="GeneID:880951" /translation="MASLRHGKQQGLGLQPAFRTRILSPDGQPVRSFSGDSIAVDGPL AACDIVVLPAFWGDFDALERRYPQIVPWLRRSHAEGTALCGEATGVFWLAQAGLLDGK EATTYWRFYREFAERFPNVLLNQEKHLTDADDLFCASGVTSACDLYIYLIERFCGGSV AQAVARDTLYEVQRSYTPGRIGFGGQKLHHDPTILQIQQWLEDHFADKFRFEDVARDH GMSIRNFMRRFQAATGDKPLHYLQRLRIETAKGMLSSTRKSIKTISYEVGYDDASFFA RLFRQHTELSPHHYRRQFMQKES" misc_feature 4968754..4969593 /locus_tag="PA4436" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene 4969770..4970732 /locus_tag="PA4437" /db_xref="GeneID:880952" CDS 4969770..4970732 /locus_tag="PA4437" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253127.1" /db_xref="GeneID:880952" /translation="MRLYLLAFLALFGMNAMAADNWKAFPYDQSAYDYPGDKLKEAWP RLTRGFGDYPYPDADWVVNMATAHPDALEKTVKAGTGFTGKPEEAAQYAARLQDVWRL LFRGDYAKAKEQGLALGVGGQVPAMFAQVLYAMFLAPGQAEKQRLLEEVIDYTEQAGP LVKADIVAQFGSVYAKARLAEELSVPVVLKRGYTSEIPKELDALLARQPNQPFALALY GGYEAGVIRKVGKLVGKMTYGVSADKMEQYFARSFRQANDLPIGHYEYANALTYVYGD DEREKAIAQLKQAVAIKPINAMEALEVAHAKKLLAGFEQNTAQR" gene complement(4970797..4971891) /locus_tag="PA4438" /db_xref="GeneID:880957" CDS complement(4970797..4971891) /locus_tag="PA4438" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253128.1" /db_xref="GeneID:880957" /translation="MTPLERYQADLQRPDFFHDAAQANAVKHLQRLYDDLVAADHAKP GLFGKLLGRKSGGPVKGLYFWGGVGRGKTYLVDTFFESLPFEQKVRTHFHRFMKRVHE ELKTLKGEKNPLTIIGKRFADEARVICFDEFFVSDITDAMILATLLEELFKNGVSLVA TSNIVPDGLYKDGLQRARFLPAIALLKEHTEIVNVDSGVDYRLRALEQAELFHWPLSE QVEEEMARSFKALTPDCAKAQRDEALMIENREIRARLTCDDVAWFEFRELCDGPRSQN DYIELAKIFHAVLISNVEQMGVTKDDMARRFINLVDEFYDRSVKLIISAEVELKDLYS GGRLEFEFQRTLSRLLEMQSHEYLTRPHRP" misc_feature complement(4970800..4971891) /locus_tag="PA4438" /note="Cell division protein ZapE (Z ring-associated ATPase), AFG1 superfamily [Cell cycle control, cell division, chromosome partitioning]; Region: ZapE; COG1485" /db_xref="CDD:441094" gene complement(4971986..4973332) /gene="trpS" /locus_tag="PA4439" /db_xref="GeneID:880958" CDS complement(4971986..4973332) /gene="trpS" /locus_tag="PA4439" /EC_number="6.1.1.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tryptophan--tRNA ligase" /protein_id="NP_253129.1" /db_xref="GeneID:880958" /translation="MTTRILTGITPTGTPHLGNYAGAIRPAILASRRSDVDSFYFLAD YHALIKCDDPARIQRSRLEIAATWLAGGLDVERATFYRQSDIPEIPELTWLLTCVSAK GLLNRAHAYKAAVDRNVEAGEDPDAGVTMGLYSYPVLMAADILMFNAHKIPVGRDQVQ HVEMARDIGQRFNHLFGNGREFFVLPEAVIEENVATLPGLDGRKMSKSYDNTIPLFSP SRQLKDAIARIVTDSRAPGEPKDPDSSHLFLLYSAFASAEQVAAFRQELLEGLAWGEA KQRLFQLLDNELGEARERYQALIAKPDDIEDILLAGAAKARRIATPFIAELREAVGLR SLREPLKSAESGKKKAAKAARLVSFRDDDGSFRFRLLDAAGEQLLLSRAFADGKAAGA VSKRLLAGETADLRAEGNAFGLWLDGEAVAQSPAFADAAARDAAIERTREALAPQE" misc_feature complement(4971995..4973332) /gene="trpS" /locus_tag="PA4439" /note="tryptophanyl-tRNA synthetase; Reviewed; Region: PRK12284" /db_xref="CDD:237036" gene complement(4973400..4974029) /locus_tag="PA4440" /db_xref="GeneID:880949" CDS complement(4973400..4974029) /locus_tag="PA4440" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253130.1" /db_xref="GeneID:880949" /translation="MSTREIPVSIDGPCGPLEALHLDLPDARGVALVCHPHPLFAGTM QNKVVATLQRSARDAGLATLRFNFRGVGQSAGSYGEGIGEIDDAEAAARWLLARHPGL PLTLMGFSFGSCVAGNLAGRLEAQGVGLARLFMIAPPVERFAVSLPARCPLTVVQPED DDVVTPAAVYAWSESLARPHELLRVAESGHFFHGKLIDLKDLLLPRLQD" misc_feature complement(4973448..4974011) /locus_tag="PA4440" /note="Alpha/beta superfamily hydrolase [General function prediction only]; Region: COG2945" /db_xref="CDD:442188" gene 4974174..4974620 /locus_tag="PA4441" /db_xref="GeneID:880950" CDS 4974174..4974620 /locus_tag="PA4441" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253131.1" /db_xref="GeneID:880950" /translation="MEQSLTAWLLPALALVAGVAIGFLIARLLPNAAPNKVQRQMDDL QDRFDSYQREVVTHFNTTASLVKKLTQSYQDVQEHLSDGAQRLALDEQTRQRLLAALH ADEAYPAERRERLTPPASGEVPKDYAPKSPDSPGTLDATYGLKGKY" misc_feature 4974174..4974614 /locus_tag="PA4441" /note="Uncharacterized membrane-anchored protein YhcB, DUF1043 family [Function unknown]; Region: YhcB; COG3105" /db_xref="CDD:442339" gene complement(4974694..4976595) /gene="cysN" /locus_tag="PA4442" /db_xref="GeneID:880979" CDS complement(4974694..4976595) /gene="cysN" /locus_tag="PA4442" /EC_number="2.7.1.25" /EC_number="2.7.7.4" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase" /protein_id="NP_253132.1" /db_xref="GeneID:880979" /translation="MSHQSDLISEDILAYLGQHERKELLRFLTCGNVDDGKSTLIGRL LHDSKMIYEDHLEAITRDSKKVGTTGDDVDLALLVDGLQAEREQGITIDVAYRYFSTA KRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARYGVQTQTRRHSFIASLLGIRHI VVAINKMDLKDFDQGVFEQIKADYLAFAEKIGLKTSSLHFVPMSALKGDNVVNKSERS PWYAGQSLMEILETVEIAADRNLDDMRFPVQYVNRPNLNFRGFAGTLASGVVRKGDEV VALPSGKGSKVKSIVTFEGELEQAGPGQAVTLTLEDEIDVSRGDMLVHADNRPLVTDG FDAMLVWMAEEPMLPGKKYDIKRATSYVPGSIPSIVHKVDVNTLERTPGSELKLNEIA RVKVSLDAPIALDGYEQNRTTGAFIVIDRLTNGTVGAGMIVSAPPAAHGSSAHHGSNA HVTREERAGRFGQQPATVLFSGLSGAGKSTLAYAVERKLFDMGRAVYVLDGQNLRHDL NKGLPQDRAGRTENWLRTAHVAKQFNEAGLISLCAFVAPSAEGREQARALIGAERLIT VYVQASPQVCRERDPQGLYAAGEDNIPGESFPYDVPLDADLVIDTQALSVEDGVKQVL DLLRERQAI" misc_feature complement(4974697..4976595) /gene="cysN" /locus_tag="PA4442" /note="bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional; Region: PRK05506" /db_xref="CDD:180120" gene complement(4976607..4977524) /gene="cysD" /locus_tag="PA4443" /db_xref="GeneID:880980" CDS complement(4976607..4977524) /gene="cysD" /locus_tag="PA4443" /EC_number="2.7.7.4" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="sulfate adenylyltransferase subunit 2" /protein_id="NP_253133.1" /db_xref="GeneID:880980" /translation="MVDKLTHLKQLEAESIHIIREVAAEFDNPVMLYSIGKDSAVMLH LARKAFFPGKLPFPVMHVDTRWKFQEMYRFRDRMVEEMGLDLITHVNPDGVAQGINPF THGSAKHTDVMKTEGLKQALDKYGFDAAFGGARRDEEKSRAKERVYSFRDSKHRWDPK NQRPELWNIYNGKVKKGESIRVFPLSNWTELDIWQYIYLEGIPIVPLYFAAEREVIEK NGTLIMIDDERILEHLSDEEKARIEKRMVRFRTLGCYPLTGAVESSATTLPEIIQEML LTRTSERQGRVIDHDQAGSMEEKKRQGYF" misc_feature complement(4976610..4977524) /gene="cysD" /locus_tag="PA4443" /note="sulfate adenylyltransferase subunit CysD; Region: PRK05253" /db_xref="CDD:235375" gene 4977869..4978972 /gene="mltB1" /locus_tag="PA4444" /db_xref="GeneID:880971" CDS 4977869..4978972 /gene="mltB1" /locus_tag="PA4444" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="murein hydrolase B" /protein_id="NP_253134.1" /db_xref="GeneID:880971" /translation="MRRTALALPLFLLVSACSSEPTPPPKPAAKPQARTVISPRPVRQ SVQPILPLRGDYANNPAAQHFIDRMVSQHGFNRQQLHDLFAQTQRLDWVIRLMDRQAP TYTPPSGPNGAWLRYRKKFVTPGNVQNGVLFWDQYETDLQRASRVYGVPPEIIVGIIG VETRWGRVMGKTRIIDALSTLSFSYPRRAEFFSGELEQFLLQARKEGTDPLALRGSYA GAMGYGQFMPSSFTKYAVDFDGDGHIDLWNPRDAIGSVANYFKQHGWVSGDRVAVPAS GRAPSLEDGFKTLYPLDVLASAGLRPQGPLGGHRQASLLRLDMGRNYQYWYGLPNFYV ITRYNHSTHYAMAVWELGKEVDRVRHRSVVRQD" misc_feature 4977869..4978951 /gene="mltB1" /locus_tag="PA4444" /note="murein hydrolase B; Provisional; Region: PRK10760" /db_xref="CDD:236754" gene complement(4978959..4979717) /locus_tag="PA4445" /db_xref="GeneID:880975" CDS complement(4978959..4979717) /locus_tag="PA4445" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253135.1" /db_xref="GeneID:880975" /translation="MAIALSTLVEEADRYLDAARIQDYCPNGLQVEGRPQVRRIVSGV TASQALLDAAVEADADVVLVHHGYFWKGENPCVVGMKQRRLKTLLNNDISLLAYHLPL DLHPEVGNNVQLARQLGFEVEGPLEPGNPRSIVLLGSLAEPMQPADFARHVRDALGRE PLLVDAGQPIRRIAWCTGGAQGYIDQAIAAGVDAYLTGEVSEQTVHSARENGISFIAA GHHATERYGVQALGDYLGKRFAIEHLFIDCPNPA" misc_feature complement(4978962..4979705) /locus_tag="PA4445" /note="Putative GTP cyclohydrolase 1 type 2, NIF3 family [Coenzyme transport and metabolism]; Region: NIF3; COG0327" /db_xref="CDD:440096" gene 4979834..4981003 /gene="algW" /locus_tag="PA4446" /db_xref="GeneID:880976" CDS 4979834..4981003 /gene="algW" /locus_tag="PA4446" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="AlgW protein" /protein_id="NP_253136.1" /db_xref="GeneID:880976" /translation="MPKALRFLGWPVLVGVLLALLIIQHNPELVGLPRQEVHVEQAPL LSRLQEGPVSYANAVSRAAPAVANLYTTKMVSKPSHPLFDDPMFRRFFGDNLPQQKRM ESSLGSAVIMSAEGYLLTNNHVTAGADQIIVALRDGRETIAQLVGSDPETDLAVLKID LKNLPAMTLGRSDGIRTGDVCLAIGNPFGVGQTVTMGIISATGRNQLGLNTYEDFIQT DAAINPGNSGGALVDAAGNLIGINTAIFSKSGGSQGIGFAIPTKLALEVMQSIIEHGQ VIRGWLGVEVKALTPELAESLGLGETAGIVVAGVYRDGPAARGGLLPGDVILTIDKQE ASDGRRSMNQVARTRPGQKISIVVLRNGQKVNLTAEVGLRPPPAPAPQQKQDGGE" misc_feature 4979993..>4980949 /gene="algW" /locus_tag="PA4446" /note="periplasmic serine protease, Do/DeqQ family; Region: degP_htrA_DO; TIGR02037" /db_xref="CDD:273938" gene complement(4981046..4982101) /gene="hisC1" /locus_tag="PA4447" /db_xref="GeneID:880991" CDS complement(4981046..4982101) /gene="hisC1" /locus_tag="PA4447" /EC_number="2.6.1.9" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="histidinol-phosphate aminotransferase" /protein_id="NP_253137.1" /db_xref="GeneID:880991" /translation="MSKFWSPFVKDLVPYVPGEQPKLSRLVKLNTNENPYGPSPQALA AMQAELNDDLRLYPDPNGERLKQAVAAHYGVQANQVFVGNGSDEVLAHIFHGLFQHDL PLLFPDVTYSFYPVYCGLYGIAHEKIALDERFRIRVEDYARPNGGIIFPNPNAPTGCL LPLDAIEAMLKASPDSVVVVDEAYVDFGGESAIALVDRYPNLLVTQTLSKSRSLAGLR VGLAVGHADLVEALERIKNSFNSYPLDRLAIAGAAAAFEDDAYFRRTCQAVIDSREAL SASLQALGFEVLPSAANFVFARHPRHDAGQIASTLREQGVIVRHFKQARIDQFLRITI GSPEQNQALLDALHFLK" misc_feature complement(4981061..4982062) /gene="hisC1" /locus_tag="PA4447" /note="Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid transport and metabolism]; Region: HisC; COG0079" /db_xref="CDD:439849" gene complement(4982104..4983426) /gene="hisD" /locus_tag="PA4448" /db_xref="GeneID:880992" CDS complement(4982104..4983426) /gene="hisD" /locus_tag="PA4448" /EC_number="1.1.1.23" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="histidinol dehydrogenase" /protein_id="NP_253138.1" /db_xref="GeneID:880992" /translation="MTAPFAIRRLNAADPDFGRHLDHLLSWESVSDDSVNQRVLDIIA AVRSRGDAAVVEFTQRFDGLQAASMADLILPRERLELALTRITVAQREALEVAAERVR SYHEKQKQGSWRYTEADGTVLGQQVTPLDRAGLYVPGGKASYPSSVLMNAIPAKVAGV SEVVMVVPTPRGEINEIVLAAACIAGVDRVFTIGGAQAVAALAYGTESVPRVDKIVGP GNIYVATAKRHVFGQVGIDMIAGPSEILVVCDGQTDPDWIAMDLFSQAEHDEDAQSIL VSPDAAFLDRVADSIARLLPTMERAEIIRTSLEGRGALIQVADQAQACAVANRIAPEH LELSVADPESWLPEIRHAGAIFMGRYTAEALGDYCAGPNHVLPTSGTARFSSPLGVYD FQKRSSIINCSAEGASVLGRTASVLARGESLTAHARSAEYRILDEKEA" misc_feature complement(4982125..4983408) /gene="hisD" /locus_tag="PA4448" /note="bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed; Region: hisD; PRK00877" /db_xref="CDD:234853" misc_feature complement(order(4982623..4982625,4982758..4982763, 4982767..4982775,4982836..4982838,4982842..4982847, 4982923..4982925,4982986..4982988,4983010..4983015, 4983019..4983021,4983244..4983246)) /gene="hisD" /locus_tag="PA4448" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:119329" misc_feature complement(order(4982149..4982169,4982173..4982178, 4982221..4982244,4982251..4982256,4982260..4982274, 4982278..4982283,4982311..4982313,4982317..4982319, 4982323..4982337,4982341..4982346,4982350..4982352, 4982356..4982382,4982386..4982391,4982398..4982400, 4982413..4982415,4982623..4982628,4982632..4982640, 4982644..4982649,4982656..4982661,4982731..4982733, 4982743..4982745,4982788..4982790,4982989..4983003, 4983037..4983039,4983043..4983045,4983052..4983066, 4983076..4983078,4983082..4983084,4983103..4983108, 4983115..4983120,4983127..4983132,4983139..4983141, 4983145..4983150,4983157..4983162)) /gene="hisD" /locus_tag="PA4448" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:119329" misc_feature complement(order(4982149..4982151,4982158..4982160, 4982164..4982166,4982305..4982307,4982323..4982328, 4982338..4982340,4982425..4982430,4982623..4982625, 4982698..4982700,4982989..4982991,4982995..4982997)) /gene="hisD" /locus_tag="PA4448" /note="product binding site [active]" /db_xref="CDD:119329" misc_feature complement(order(4982149..4982151,4982158..4982160, 4982164..4982166,4982305..4982307,4982323..4982328, 4982338..4982340,4982425..4982430,4982623..4982625, 4982632..4982634,4982698..4982700,4982989..4982991)) /gene="hisD" /locus_tag="PA4448" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119329" misc_feature complement(order(4982149..4982151,4982326..4982328, 4982623..4982625,4982632..4982634)) /gene="hisD" /locus_tag="PA4448" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:119329" misc_feature complement(4982425..4982430) /gene="hisD" /locus_tag="PA4448" /note="catalytic residues [active]" /db_xref="CDD:119329" gene complement(4983552..4984187) /gene="hisG" /locus_tag="PA4449" /db_xref="GeneID:880968" CDS complement(4983552..4984187) /gene="hisG" /locus_tag="PA4449" /EC_number="2.4.2.17" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP phosphoribosyltransferase" /protein_id="NP_253139.1" /db_xref="GeneID:880968" /translation="MLTIALSKGRILDDTLPLLAAAGIVPSENPDKSRKLIIPTSLSD VRLLIVRATDVPTYVEHGAADLGVAGKDVLMEYGGQGLYEPLDLRIANCKLMTAGAIG APEPKGRLRVATKFVNVAKRYYAEQGRQVDVIKLYGSMELAPLVGLADKIIDVVDTGN TLRANGLEPQELIATISSRLVVNKASMKMQHGRIQSLIDTLRDAVEARHRH" misc_feature complement(4983576..4984187) /gene="hisG" /locus_tag="PA4449" /note="The catalytic domain of hetero-octomeric short form HisGs; contains the type 2 periplasmic binding protein fold; Region: PBP2_HisGs; cd13595" /db_xref="CDD:270313" misc_feature complement(order(4983594..4983596,4983603..4983605, 4983615..4983617,4983639..4983641,4983744..4983746, 4983750..4983755,4983762..4983764,4983771..4983788, 4983798..4983800,4983834..4983836,4983927..4983944, 4984005..4984010,4984014..4984016,4984026..4984028, 4984041..4984046,4984077..4984082,4984164..4984166)) /gene="hisG" /locus_tag="PA4449" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:270313" misc_feature complement(order(4983705..4983716,4983720..4983728, 4983765..4983767,4983771..4983773)) /gene="hisG" /locus_tag="PA4449" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270313" gene complement(4984205..4985470) /gene="murA" /locus_tag="PA4450" /db_xref="GeneID:880969" CDS complement(4984205..4985470) /gene="murA" /locus_tag="PA4450" /EC_number="2.5.1.7" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /protein_id="NP_253140.1" /db_xref="GeneID:880969" /translation="MDKLIITGGNRLDGEIRISGAKNSALPILAATLLADTPVTVCNL PHLHDITTMIELFGRMGVQPIIDEKLNVEVDASSIKTLVAPYELVKTMRASILVLGPM LARFGEAEVALPGGCAIGSRPVDLHIRGLEAMGAQIEVEGGYIKAKAPAGGLRGGHFF FDTVSVTGTENLMMAAALANGRTVLQNAAREPEVVDLANCLNAMGANVQGAGSDTIVI EGVKRLGGARYDVLPDRIETGTYLVAAAATGGRVKLKDTDPTILEAVLQKLEEAGAHI STGSNWIELDMKGNRPKAVNVRTAPYPAFPTDMQAQFISMNAVAEGTGAVIETVFENR FMHVYEMNRMGAQILVEGNTAIVTGVPKLKGAPVMATDLRASASLVIAGLVAEGDTLI DRIYHIDRGYECIEEKLQLLGAKIRRVPG" misc_feature complement(4984214..4985470) /gene="murA" /locus_tag="PA4450" /note="UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated; Region: PRK09369" /db_xref="CDD:236486" misc_feature complement(order(4984769..4984780,4985408..4985419)) /gene="murA" /locus_tag="PA4450" /note="hinge; other site" /db_xref="CDD:238796" misc_feature complement(order(4984547..4984549,4984970..4984975, 4984982..4984984,4985090..4985107,4985180..4985182, 4985192..4985194,4985402..4985404)) /gene="murA" /locus_tag="PA4450" /note="active site" /db_xref="CDD:238796" gene complement(4985491..4985730) /locus_tag="PA4451" /db_xref="GeneID:880983" CDS complement(4985491..4985730) /locus_tag="PA4451" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253141.1" /db_xref="GeneID:880983" /translation="MQAEDVKSLLQEKLPGTQVEVEGEGCNFQLNLISDELAGQSPVK RQQQVYAHLNAWIADGSIHAVTMKFFSRAAWAERS" misc_feature complement(4985494..4985730) /locus_tag="PA4451" /note="Acid stress protein IbaG/YrbA, BolA-like family [Signal transduction mechanisms]; Region: IbaG; COG5007" /db_xref="CDD:444031" gene complement(4985782..4985843) /locus_tag="PA4451.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965616" ncRNA complement(4985782..4985843) /ncRNA_class="other" /locus_tag="PA4451.1" /product="P35" /db_xref="GeneID:6965616" gene complement(4985847..4986155) /locus_tag="PA4452" /db_xref="GeneID:880993" CDS complement(4985847..4986155) /locus_tag="PA4452" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253142.1" /db_xref="GeneID:880993" /translation="MSQASLREGAAGELQLAGVLDYSSGPALREQGGRLIRASQAAEL VVDCSAVERSSSVGISLLLAFIRDARKAGKVLSVRALPDDMREIAKVSSLLEILPLQE " misc_feature complement(4985859..4986155) /locus_tag="PA4452" /note="Binding protein subunit MlaB of the ABC-type intermembrane phospholipid transporter Mla, contains STAS domain [Cell wall/membrane/envelope biogenesis]; Region: MlaB; COG3113" /db_xref="CDD:442347" gene complement(4986152..4986799) /locus_tag="PA4453" /db_xref="GeneID:880994" CDS complement(4986152..4986799) /locus_tag="PA4453" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253143.1" /db_xref="GeneID:880994" /translation="MLTLLRRGLLVFLAAFPLLSMAAPTPQQVVQGTVDELLSDIKAN KAAYKADPQKLYATLDRILGPVVDAEGIAKSVMTVKYSRQASPEQIKRFEEVFKNSLM QFYGNALLEYDNQDIRVLPSSAKPSDDRASVNMEIRDSKGTVYPVSYTMTNLAGGWKV RNVIINGINIGKLFRDQFADTMQKNRNDLEKTIAGWGEVVAKAKETAKAEEAGAK" misc_feature complement(4986179..4986730) /locus_tag="PA4453" /note="Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla [Cell wall/membrane/envelope biogenesis]; Region: MlaC; COG2854" /db_xref="CDD:442102" gene complement(4986811..4987284) /locus_tag="PA4454" /db_xref="GeneID:881007" CDS complement(4986811..4987284) /locus_tag="PA4454" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253144.1" /db_xref="GeneID:881007" /translation="MQTRTLEIGVGLFLLAGLLALLLLALRVSGLSVGNAGDTYKVYA YFDNIAGVTVRGKVTLAGVTIGKVTAVDLDRDSYTGRVTMEINQNVNNLPVDSTASIL TAGLLGEKYIGISVGGDEDVLKDGSTIHDTQSALVLEDLIGKFLLNSVNKDEAKK" misc_feature complement(4986847..4987206) /locus_tag="PA4454" /note="outer membrane lipid asymmetry maintenance protein MlaD; Region: OM_asym_MlaD; TIGR04430" /db_xref="CDD:275223" gene complement(4987285..4988082) /locus_tag="PA4455" /db_xref="GeneID:881008" CDS complement(4987285..4988082) /locus_tag="PA4455" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_253145.1" /db_xref="GeneID:881008" /translation="MRRVSPLERIRLFGRAGLDVVAALGRSTLFLGHALLGRRTPGTG LHLLVKQLYSVGVLSLAIIVVSGLFIGMVLALQGYNILISYGSEQAVGQMVALTLLRE LGPVVTGLLFAGRAGSALTAEIGNMKATEQLSSLEMIGVDPLKYIVAPRLWAGFISMP LLAAIFSVVGIWGGAMVAVDWLGVYEGSFWANMQNSVQFTEDVLNGVIKSIVFAFVVT WIAVYQGYDCEPTSEGISRATTRTVVYASLAVLGLDFILTALMFGDF" misc_feature complement(4987294..4988052) /locus_tag="PA4455" /note="lipid asymmetry maintenance ABC transporter permease subunit MlaE; Region: perm_MlaE_1; NF033619" /db_xref="CDD:411238" gene complement(4988082..4988891) /locus_tag="PA4456" /db_xref="GeneID:881000" CDS complement(4988082..4988891) /locus_tag="PA4456" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_253146.1" /db_xref="GeneID:881000" /translation="MSTDSAYAVELKGLTFKRGSRAIFDNIDVRIPRGKVTGIMGPSG CGKTTLLRLIASQLRPSKGEVWVNGQNLPQLSRGDLFDMRKQFGVLFQSGALFTDLDV FENVAFPLRVHTQLPEEMIRDIVLMKLQAVGLRGAVELMPDELSGGMKRRVALARAIA LDPQILLYDEPFVGQDPIAMGVLVRLIRLLNDALGITSIVVSHDLAETASIADYIYIV GDGRVLGHGTPDVLKETDDPRIRQFVKGIPDGPVPFHYPARDYRADLLGER" misc_feature complement(4988091..4988867) /locus_tag="PA4456" /note="phospholipid ABC transporter ATP-binding protein MlaF; Region: PRK11831" /db_xref="CDD:236997" gene 4989305..4990285 /locus_tag="PA4457" /db_xref="GeneID:881001" CDS 4989305..4990285 /locus_tag="PA4457" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="arabinose-5-phosphate isomerase KdsD" /protein_id="NP_253147.1" /db_xref="GeneID:881001" /translation="MNMSQNLDFIHSAQRTIGLERDAVDSLLARIGDDFVKACELLLA GKGRVVVVGMGKSGHVGKKIAATLASTGTPSFFVHPAEASHGDMGMITKDDVVLALSN SGSTAEIVTLLPLIKRLGITLISMTGNPESPLAKAAEVNLDASVGQEACPLNLAPTSS TTVTLVLGDALAIALLEARGFTAEDFAFSHPGGALGRRLLLKVEDVMHVGEGLPQVLL GTSLTGALMEMTRKGLGMTVVLDEHGKLAGIFTDGDLRRALDRGIDVRQVTIDQVMTV HGKTVRAEILAAEALKIMEDNKIGALVVVDADDRPVGALNMHDLLRAGVM" misc_feature 4989326..4990279 /locus_tag="PA4457" /note="arabinose-5-phosphate isomerase KdsD; Region: PRK10892" /db_xref="CDD:182814" gene 4990285..4990824 /locus_tag="PA4458" /db_xref="GeneID:881005" CDS 4990285..4990824 /locus_tag="PA4458" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253148.1" /db_xref="GeneID:881005" /translation="MSDTHSAAELPVRASRIRLAIFDVDGVLTDGKLYFLVDGSEFKT FNTLDGHGIKMLIASGVRTAIITGRDTPVVERRARNLGIQHLYQGREDKLAVLDELLG ELGLGYEQVAYLGDDLPDLPVIRRVGLGMAVASADPFVRQHAHGVTAARGGEGAAREF CELIMRAQGTLEAAQSAYL" misc_feature 4990321..4990821 /locus_tag="PA4458" /note="3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC and related HAD superfamily phosphatases [Cell wall/membrane/envelope biogenesis, General function prediction only]; Region: KdsC; COG1778" /db_xref="CDD:441384" gene 4990833..4991405 /locus_tag="PA4459" /db_xref="GeneID:881006" CDS 4990833..4991405 /locus_tag="PA4459" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253149.1" /db_xref="GeneID:881006" /translation="MPKTLRQKLLLALIALLLIVAGYYWNVGLELFNEQPTRPGQDNT IDYYAENAHSLQYQEDGSLDYEMTAVKLEHQKATDITFVTTPDLLLFRGNVQPWHIQS ARAEVGPKGKEVELIDDVRVARTDAKGQPSILTTTRLTVFPDKNYAQTEQAVKIDAAN GVTTAVGMKAYLKDSRMHLLSNVRGQHEVR" misc_feature 4990890..4991396 /locus_tag="PA4459" /note="Lipopolysaccharide-assembly, LptC-related; Region: LptC; pfam06835" /db_xref="CDD:429144" gene 4991392..4991919 /locus_tag="PA4460" /db_xref="GeneID:881017" CDS 4991392..4991919 /locus_tag="PA4460" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253150.1" /db_xref="GeneID:881017" /translation="MRFVNTLPLIFGLTAALGSSMALALPSDREQPIRVQADSAELDD KQGVAVYRGDVVVTQGSTKLTGNTVTLKQDKNGDIEVVTSVGKPAYYEQKPAPDKDVT KAYGLTIQYFVTQNRVVLIDQAKVIQEGNTFEGEKIVYDTQRQIVNAGRATGSQVTSP RPRIDMVIQPKKKAQ" misc_feature 4991461..4991904 /locus_tag="PA4460" /note="lipopolysaccharide transport periplasmic protein LptA; Region: outer_YhbN_LptA; TIGR03002" /db_xref="CDD:274384" gene 4991919..4992644 /locus_tag="PA4461" /db_xref="GeneID:881018" CDS 4991919..4992644 /locus_tag="PA4461" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_253151.1" /db_xref="GeneID:881018" /translation="MATLKAQHLAKSYKGRQVVRDVSMSIDSGQIVGLLGPNGAGKTT CFYMIVGLVQADQGVVRIDEQNVTHLPMHGRARAGIGYLPQEASIFRKLSVSDNIMAI LETRSDLDRNGRKEALEGLLQEFHIHHIRDNLGMSLSGGERRRVEIARALASAPKFIL LDEPFAGVDPISVGDIKQIIHHLKAKGIGILITDHNVRETLDICETAYIVNDGQLIAE GDAESILANDLVKEVYLGHEFRL" misc_feature 4991919..4992641 /locus_tag="PA4461" /note="ABC-type lipopolysaccharide export system, ATPase component [Cell wall/membrane/envelope biogenesis]; Region: LptB; COG1137" /db_xref="CDD:440752" gene 4992870..4994363 /gene="rpoN" /locus_tag="PA4462" /db_xref="GeneID:881022" CDS 4992870..4994363 /gene="rpoN" /locus_tag="PA4462" /EC_number="2.7.7.6" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="RNA polymerase factor sigma-54" /protein_id="NP_253152.1" /db_xref="GeneID:881022" /translation="MKPSLVLKMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESN PMLERQEDGDDFDNSDPLADGAEQAASAPQESPLQESATPSVESLDDDQWSERIPSEL PVDTAWEDIYQTSASSLPSNDDDEWDFTARTSSGESLHSHLLWQVNLAPMSDTDRMIA VTIIDSINNDGYLEESLEEILAAIDPELDVELDEVEVVLRRIQQLEPAGIGARNLREC LLLQLRQLPSTTPWLNEALRLVSDYLDLLGGRDYSQLMRRMKLKEDELRQVIELIQCL HPRPGSQIESSEAEYIVPDVIVRKDNERWLVELNQEAMPRLRVNATYAGMVRRADSSA DNTFMRNQLQEARWFIKSLQSRNETLMKVATQIVEHQRGFLDYGEEAMKPLVLHDIAE AVGMHESTISRVTTQKYMHTPRGIFELKYFFSSHVSTAEGGECSSTAIRAIIKKLVAA ENAKKPLSDSKIAGLLEAQGIQVARRTVAKYRESLGIAPSSERKRLV" misc_feature 4992870..4994357 /gene="rpoN" /locus_tag="PA4462" /note="RNA polymerase factor sigma-54; Reviewed; Region: PRK05932" /db_xref="CDD:235648" gene 4994441..4994749 /locus_tag="PA4463" /db_xref="GeneID:881023" CDS 4994441..4994749 /locus_tag="PA4463" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253153.1" /db_xref="GeneID:881023" /translation="MQVNISGHQLDVTDALRDYVGEKLSRLERHFDKITNVQVIMEVE KLKQKIEATLRIAGGEIVANAEHEDMYAAIDLLIDKLDRQLIKHKEKYLERQQGVGAR " misc_feature 4994441..4994725 /locus_tag="PA4463" /note="ribosomal subunit interface protein; Region: yfiA; TIGR00741" /db_xref="CDD:129824" misc_feature order(4994450..4994452,4994456..4994458,4994462..4994464, 4994516..4994518,4994525..4994527,4994543..4994548, 4994558..4994560,4994570..4994572,4994597..4994599, 4994606..4994617,4994624..4994626,4994630..4994632, 4994639..4994641,4994645..4994647,4994654..4994656, 4994696..4994701,4994711..4994713) /locus_tag="PA4463" /note="30S subunit binding site [active]" /db_xref="CDD:238308" gene 4994763..4995227 /gene="ptsN" /locus_tag="PA4464" /db_xref="GeneID:880997" CDS 4994763..4995227 /gene="ptsN" /locus_tag="PA4464" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nitrogen regulatory IIA protein" /protein_id="NP_253154.1" /db_xref="GeneID:880997" /translation="MIRLEQILTPGRSLVNVPGGSKKRVLEQIANLVARELPEFDAQT IFENLVAREKLGSTGFGNGIAIPHCRLSGCQSPISAVLHLDAPVDFDALDGAPVDLLF VLLVPEAATEEHLELLRQIAAMLDRADVRDRLRSAPTAEALYQIVVDVQNGQ" misc_feature 4994769..4995209 /gene="ptsN" /locus_tag="PA4464" /note="PTS IIA-like nitrogen-regulatory protein PtsN; Region: nitro_reg_IIA; TIGR01419" /db_xref="CDD:162350" misc_feature order(4994916..4994918,4994964..4994966) /gene="ptsN" /locus_tag="PA4464" /note="active site" /db_xref="CDD:238129" misc_feature 4994964..4994966 /gene="ptsN" /locus_tag="PA4464" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:238129" gene 4995229..4996089 /locus_tag="PA4465" /db_xref="GeneID:880998" CDS 4995229..4996089 /locus_tag="PA4465" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253155.1" /db_xref="GeneID:880998" /translation="MRLIIVSGRSGSGKSTALNVLEDNGFYCIDNLPASLLPDLAQRA LLHTELLQPQVAVSIDARNLPSQLQRFPELLQEVRDNHINCDVLYLDADDETLLKRFS ETRRRHPLTTDTRSLAEAIGDESQLLGPIADLADLKLDTTSLNLYQLRDTIKLRLLNK PEPGTAFLVESFGFKRGMPVDADLVFDVRCLPNPYWKPELRDHSGLEPEVREYLAAQP DVEEMYQDIVGYLNKWLPRFAASNRSYVTVAIGCTGGHHRSVYLAERIGAALRDSLKN VQIRHRDLSS" misc_feature 4995229..4996080 /locus_tag="PA4465" /note="RNase adapter RapZ; Region: PRK05416" /db_xref="CDD:235450" gene 4996119..4996391 /locus_tag="PA4466" /db_xref="GeneID:881011" CDS 4996119..4996391 /locus_tag="PA4466" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phosphoryl carrier protein" /protein_id="NP_253156.1" /db_xref="GeneID:881011" /translation="MPALEITIINKLGLHARAAAKFVGVAGRYPCQVRVGRNPESCVD GKSIMAVMMLAAGKGTNLHLHTEGEQEDEALNALVELINNRFDEGE" misc_feature 4996119..4996385 /locus_tag="PA4466" /note="HPr or related phosphotransfer protein [Signal transduction mechanisms, Carbohydrate transport and metabolism]; Region: PtsH; COG1925" /db_xref="CDD:441528" gene complement(4996488..4997420) /locus_tag="PA4467" /db_xref="GeneID:881012" CDS complement(4996488..4997420) /locus_tag="PA4467" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253157.1" /db_xref="GeneID:881012" /translation="MAGRQPGGAAMKALLHGIAEGNGRTLRNLLGLLIFIGGGYLLGR HALLLAELNLPAPIVLALKGGLLCAFGTALGAMPVLVVKTMPARLSDALLGFGAGVML SATAFSLIMPALSAAGDLGYSKFGAGFLVSFGLAVGVMGLFILGRLMPDVHPGCEGAP LSGGIPPRILLFVTAIVLHNIPEGMAVGVSAGAGLDEANGLALGIALQDVPEGLVVAL VLAGVGMSRFKAMLVGAASGLVEPLFAVLCAWLVGLSALLLPWGLAAAAGAMLFVVTH EIIPESHRQGHAAEATLGLVFGFCLMMVLDTALG" misc_feature complement(4996497..4997252) /locus_tag="PA4467" /note="Zinc transporter ZupT [Inorganic ion transport and metabolism]; Region: ZupT; COG0428" /db_xref="CDD:440197" gene complement(4997439..4998050) /gene="sodM" /locus_tag="PA4468" /db_xref="GeneID:881040" CDS complement(4997439..4998050) /gene="sodM" /locus_tag="PA4468" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="superoxide dismutase" /protein_id="NP_253158.1" /db_xref="GeneID:881040" /translation="MPHALPPLPYAYDALEPHIDALTMEIHHSKHHQTYVNNLNAALE GTPYAEQPVESLLRQLAGLPEKLRTPVVNNGGGHANHSLFWTVMSPQGGGRPDGDLGR AIDEQLGGFEAFKDAFTKAALTRFGSGWAWLSVTPQGSLLVESSGNQDSPLMNGNTPI LGLDVWEHAYYLKYQNRRPEYIGAFYNVIDWREVARRYAQALA" misc_feature complement(4997460..4998038) /gene="sodM" /locus_tag="PA4468" /note="Superoxide dismutase [Inorganic ion transport and metabolism]; Region: SodA; COG0605" /db_xref="CDD:440370" gene complement(4998063..4998512) /locus_tag="PA4469" /db_xref="GeneID:881041" CDS complement(4998063..4998512) /locus_tag="PA4469" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253159.1" /db_xref="GeneID:881041" /translation="MRHWQRTIEQGNRCFVTGALIDAREHYLHALALAQVLLERWGDA DEAVMAFVISHHNLADLHLQLEQPEETAEYLCACHERLLRVSADQKLPLALRQAAQHH SRRTYVELLSFIGEHGAYPRTERLLKGPPNAEVRPEFLAPPPSLRYH" misc_feature complement(<4998264..4998503) /locus_tag="PA4469" /note="Protein of unknown function (DUF2753); Region: DUF2753; pfam10952" /db_xref="CDD:431555" protein_bind complement(4998067..4998079) /locus_tag="PA4469" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(4998540..4999916) /gene="fumC1" /locus_tag="PA4470" /db_xref="GeneID:881033" CDS complement(4998540..4999916) /gene="fumC1" /locus_tag="PA4470" /EC_number="4.2.1.2" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="fumarate hydratase" /protein_id="NP_253160.1" /db_xref="GeneID:881033" /translation="MTDTRIERDSMGELAVPATALYGAQTQRAVNNFPVSGQRMPQAF VRALLLAKAAAARANVSLQQLDAPMGEAIADTCLQLLQEDFMQHFPVDVFQTGSGTSS NMNANEVVATLASRRLGGKVNPNDHVNCGQSSNDIIPSTIHISAALEISERLLPALRH LEQTIQSKAGEVHAYVKTGRTHLMDAMPVRMSQVLGGWAQQVRQAGVHIESVLPALQQ LAQGGTAVGTGINAHPRFAERFSQELNDLTGLAFRPGDDFFALIGSQDTAVAASGQLK TLAVTLMKLANDLRWMNSGPLAGLGEIELEALQPGSSIMPGKVNPVIPEATAMVAAQV IGNDAAIAVAGQSGNFELNVMLPLVADNLLHSIQLLANVSRLLADKAIASFKVNQGKL SEALARNPILVTALNPIIGYQKAAEIAKQAYREGRPIIDVALENTDLDRARLEVLLDP EKLTAGGL" misc_feature complement(4998555..4999916) /gene="fumC1" /locus_tag="PA4470" /note="Fumarate hydratase class II [Energy production and conversion]; Region: FumC; COG0114" /db_xref="CDD:439884" gene complement(4999909..5000304) /locus_tag="PA4471" /db_xref="GeneID:881034" CDS complement(4999909..5000304) /locus_tag="PA4471" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253161.1" /db_xref="GeneID:881034" /translation="MSFEAHDPQALDHWYWLGTQIRCALDPDEPRLLDQYLGEARYLA GWEGVAAWPLFEKAYNLLLDTGRDPILPWHWRSLCLDYAYRPLCELQRLTTNGSQRRR LRQLSVRMARQDLAPSMSFDHPQQGNQDD" protein_bind complement(5000321..5000340) /experiment="EMSA [PMID: 8806672]" /note="Transcription factor binding site for NP_415209." /bound_moiety="Fur" protein_bind 5000321..5000339 /experiment="DNAse footprinting [PMID: 9045799]" /experiment="EMSA [PMID: 9045799]" /experiment="Primer Extension assay [PMID: 9045799]" /note="Transcription factor binding site for NP_253452. Originally reported in Pseudomonas aeruginosa FRD1; Evidence of regulation for: PA4471" /bound_moiety="Fur" protein_bind complement(5000327..5000345) /experiment="'DNAse footprinting [PMID: 9045799, 8633080]'" /experiment="'EMSA [PMID: 9045799, 8633080]'" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="Primer Extension assay [PMID: 9045799]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA4471" /bound_moiety="Fur" gene complement(5000452..5001801) /gene="pmbA" /locus_tag="PA4472" /db_xref="GeneID:881037" CDS complement(5000452..5001801) /gene="pmbA" /locus_tag="PA4472" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="PmbA protein" /protein_id="NP_253162.1" /db_xref="GeneID:881037" /translation="MSLHAAAVGPSVLPDLREQVEQIIAEARRQGASACEVAVSLEQG LSTSVRQGEVETVEFNRDQGFGITLYAGQRKGSASTSATGEAAIRETVAAALAIARHT SEDECAGLADAALMARELPELDLYHPWSLSPEQAVERALACEAAAFAADKRVTKADGT TLNTHQGCRVYGNSHGFIGGYASTRHSLSCVMIAEGEGQMQRDYWYDVNRRGEALASA ESIGRRAAERAASRLGARPVQTAEVPVLFAPEIAVGLFGHFLGAISGGSLYRKSSFLE GALGQRLFPEWLSIDERPHLVGALGSASFDSDGLATYAKPFVENGELVSYVLGTYSGR KLGLPSTANAGGVHNLFVSHGDEDQAALIRRMERGLLVTELMGQGVNLVTGDYSRGAA GYWVENGEIQFPVQEVTIAANLRDLFRRIVAVGKDIERRGNLHTGSVLVESMMVAGR" misc_feature complement(5000458..5001753) /gene="pmbA" /locus_tag="PA4472" /note="PmbA/TldA metallopeptidase domain 1; Region: PmbA_TldD; cl19356" /db_xref="CDD:450292" gene 5001822..5002424 /locus_tag="PA4473" /db_xref="GeneID:881038" CDS 5001822..5002424 /locus_tag="PA4473" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253163.1" /db_xref="GeneID:881038" /translation="MAAHAAGPDKRPLTRYHGGVFHWTTTMAEFHDDDSQFEEKSKSQ IKRELHALQDLGERLTTLQPQLLERLPLTDPLRKALLEAPKHKAHIARKRHIQYIGKL MRDQDVDAIVALIDQVDSSTRQYNERFHALERWRDQLIAGGDAALDAFVGEFPECDRQ HLRGLVRHAQHEAAHNKPPAAARKVFKYIRELDETKRGLR" misc_feature 5001897..5002403 /locus_tag="PA4473" /note="ribosome-associated protein; Region: PRK05255" /db_xref="CDD:235377" gene complement(5002455..5003897) /locus_tag="PA4474" /db_xref="GeneID:881030" CDS complement(5002455..5003897) /locus_tag="PA4474" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253164.1" /db_xref="GeneID:881030" /translation="MSELLSSVSQQLLAPGGLELDSLPGILHELNGPGIDAADLYFQS QVSESWMLEDGIVKEGSFNLDQGVGVRAQSGEKTGFAYSNAITAEALKQAAVAARSIS RAGQNGSVQAFKAVVPARLYAGENPLDVLSRAEKVELLKQIDAATRALDPRIQQVTVS MAGVWEQILVAASDGSLAADIRPLVRFNVSVIVEQNGRRERGGHGGGGRTDYRYFLQE DRAMGYAREALRQALVNLEAIPAPAGTLPVVMGAGWSGVLLHEAVGHGLEGDFNRKGS SAYSGRVGEKVASSLCTIVDDGTLAGRRGSLSVDDEGTPSNCNVLIENGVLKGYMQDK LNARLMGVARTGNGRRESYAHLPMPRMTNTYMLAGESDPQEIIASVEKGIYCANLGGG QVDITSGKFVFSTSEAYLIENGRITTPVKGATLIGNGPEAMSRVSMVGNDLALDSGVG TCGKDGQSVPVGVGQPTLKIDAITVGGTGA" misc_feature complement(5002464..5003885) /locus_tag="PA4474" /note="PmbA/TldA metallopeptidase domain 1; Region: PmbA_TldD; cl19356" /db_xref="CDD:450292" gene complement(5003900..5004748) /locus_tag="PA4475" /db_xref="GeneID:881031" CDS complement(5003900..5004748) /locus_tag="PA4475" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253165.1" /db_xref="GeneID:881031" /translation="MSIAVIQMVSQDDVTANLAAARRLLEQAAEGGARLAVLPENFAA MGRRDLAELGRAEARGNGPILPWLNSAARDLRLWIVAGTLPLPPDGQPEAKANACSLL IDEHGERVARYDKLHLFDVDVADARGRYRESDDYAFGQKIVVADTPVGRLGLTVCYDL RFPELYTALREAGAELITAPSAFTAVTGAAHWQVLVRARAIETQCYLLAAGQGGVHPR GRETFGHSAIVDPWGRVLAERPQGEAVLLAVRDAAEQADIRRRMPVVAHRRFFPPAEP RPARTE" misc_feature complement(5003942..5004742) /locus_tag="PA4475" /note="Nit1, Nit 2, and related proteins, and the Nit1-like domain of NitFhit (class 10 nitrilases); Region: nit; cd07572" /db_xref="CDD:143596" misc_feature complement(order(5004203..5004205,5004266..5004271, 5004275..5004280,5004353..5004355,5004392..5004394, 5004404..5004406,5004455..5004457,5004629..5004631)) /locus_tag="PA4475" /note="putative active site [active]" /db_xref="CDD:143596" misc_feature complement(order(5004278..5004280,5004404..5004406, 5004629..5004631)) /locus_tag="PA4475" /note="catalytic triad [active]" /db_xref="CDD:143596" misc_feature complement(order(5003942..5003944,5003948..5003953, 5003960..5003965,5004053..5004055,5004143..5004148, 5004152..5004160,5004164..5004169,5004176..5004181, 5004245..5004250,5004254..5004268,5004275..5004277, 5004329..5004337,5004398..5004403)) /locus_tag="PA4475" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143596" gene complement(5004798..5008628) /locus_tag="PA4476" /db_xref="GeneID:881045" CDS complement(5004798..5008628) /locus_tag="PA4476" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253166.1" /db_xref="GeneID:881045" /translation="MADVGSLGTRLLRIVLGLCALVLVLLALYVSLGRQLVPLVAEYR QQLEDEAGKQLGIPVRIAELTGSWRGFEPLVVARDIQVGDGEQSLRLARVRLAPDLLG SLLARQVRIGSLELEGLKLTLREGEDGQWSLDGLPHSDKPSDPRKLLQFLLQTQRISL LDSQLEVAPRGSAALSLSAVGATLRSSSVGGQSLDARLQLPDGQPLALHAEGRIDSED WPRSSARFYLSLPQSDWAQWLPAGLTQEWTIVRAKAGGDFWFDWRDGKAQRLVARLLA PQLKASYAARKPVEINDLGMNLFFDREAQGWKVRVGDLAANFGEQRWGEVELLLRRDQ QNNEPHWKLQADRVDLTPLVPAIEALAPLPDAAAEWVAGLKPKGILHNLNADFWPQRE VPERVSYATNLEKVGISAFHEVPAVENVSGTLTGTLAGGQLDASAQDFMLHLAKVFPE PWRYREARTRMFWSLDDRAFTLGSHLMRVEGEEGSLAGDMLIRLMRDPGAEDYMDLQV GLSDGDARFTAKYLPTQLPGMNKSLANWLKTAIRSGHVEQGYFQWQGSLNRGAAAEAH VMNLYFKVRDGELAYQPGWPALSKTVGEVFVEDSGVRVLASSGNLLNSRVSDVKVDIP LGRPGQTPHLYVDGAVDSNLKDGIKLLQEAPIPTRKIFAGWEGDGPLQGHLTLDIPLD HDEAGKTGVVVDFSTVGATLKMPSPKLDMSEVKGDFRFDLAKGLSAPAVQARVLGSEV RGRIVAEGRGDARTRLLLNGQVAVKSLSDWLGAGQRPLPVSGRLPFQLNLLLDGKDSQ LQIDSDLKGAVVDLPAPFGKTAAQARPTQWRMTLDGAERRYWARYDGLASLAYAAPAD KPLNGRGALRLGGDPALLPSAQGLRVRGRLAELDWDAWQATLKRYGNGDQAASSAAGL LRGADLRIDSFKGFGQELKNLTVDLARQERAWQLVLVSDLASGRLVLPDARGAPIVVD LDRLNLPKSTLPDENKVEDSDPLAAVDPRSLPAVDVKIGQVALGGQPLGAWSLKVRPG SNGVAFNDLDLDLRGLHVNGSLRWDGSPGNTRSTYQGRIEGKNLADVLKAWNFAPSAT SERFRMDINGQWPGSPAYMALKRFSGSMDASLRKGQFVEVEGSAQALRVFGLLNFNAI NRRLRLDFSDILGKGLSYDRVKGVLSATDGVYVTREPLKLEGPSSNLELNGTLDLAHD RIDAKLLVTLPLTNNLTLAALIVGGPAVGGAVFVVDKLLGDRVSRFASVQYSVKGPWQ DPKISFDKPFEKPR" misc_feature complement(5004804..5008532) /locus_tag="PA4476" /note="Uncharacterized conserved protein YhdP, contains DUF3971 and AsmA2 domains [Function unknown]; Region: YhdR; COG3164" /db_xref="CDD:442397" gene complement(5008643..5010100) /gene="cafA" /locus_tag="PA4477" /db_xref="GeneID:881046" CDS complement(5008643..5010100) /gene="cafA" /locus_tag="PA4477" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytoplasmic axial filament protein" /protein_id="NP_253167.1" /db_xref="GeneID:881046" /translation="MSEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKG RVVRVLPGMQAAFVDIGLERAAFIHAAEISNREGSAVESISALVHEGQALVVQVTKDP IGTKGARLTTHLSIPSRYLVYMPRTSHVGISLRIEDEVERERLKKVVADCVAAEGIEG QGGFILRTAAEGAGEDEILADIRYLRRLWDQIAAQIQTVGAPSVIYEDLSLAIRTLRD LVNPRIEKIRIDSRENFQKITSFVEELMPEISDRLEHYPGERPIFDLYGVEDEIQKAL ERKVLLKSGGYLIVDPTEAMTTIDVNTGAFVGHRNLEETIFKTNLEAATAIARQLRLR NLGGIIIIDFIDMEDEEHRRQVLRTLEKQLERDHAKTNIIGITELGLVQMTRKRTRES LVQILCEPCPCCQGRGMLKTAETTCYEIFREILREARAYQADSYLVLANQKVVDRLLD EESGNVADLEAFIGRTIKFQVEAMYSQEQYDVVLL" misc_feature complement(5008646..5010094) /gene="cafA" /locus_tag="PA4477" /note="Ribonuclease G or E [Translation, ribosomal structure and biogenesis]; Region: CafA; COG1530" /db_xref="CDD:441139" gene complement(5010134..5010739) /locus_tag="PA4478" /db_xref="GeneID:881135" CDS complement(5010134..5010739) /locus_tag="PA4478" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253168.1" /db_xref="GeneID:881135" /translation="MPSLYLASASPRRRELLTQIGVPLSVLVTAIDESPLPNEAPAAY VERLARGKAAAGLAMLEGRGEDGCVLGADTSVVIDGRILGKPVDQADGLAMLAALSGR EHQVLTAVALAAAGGVEARVVECRVRFRQVAPEEALRYWQSGEPADKAGGYAIQGLGA IFVSRIEGSYSAVVGLPLCETAELLREFGIPCWQPVGGNPP" misc_feature complement(5010161..5010736) /locus_tag="PA4478" /note="7-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamily [Secondary metabolites biosynthesis, transport and catabolism]; Region: Maf; COG0424" /db_xref="CDD:440193" gene complement(5010828..5011322) /gene="mreD" /locus_tag="PA4479" /db_xref="GeneID:881136" CDS complement(5010828..5011322) /gene="mreD" /locus_tag="PA4479" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="rod shape-determining protein MreD" /protein_id="NP_253169.1" /db_xref="GeneID:881136" /translation="MARATQGSNNVWVIWLSLLVGLVLAVAPMPTFTEIGRPLWLAML LTYWVLLLPERVGMVTAWLLGLAQDVLYGNLLGQNALILGLITFLVLSLHQRLRMFPA WQQCLVLVVVYGLAQLLQLWLNALTGNRPPTLTFLLPALVSALLWPWVYALLQFVRLR LNVR" misc_feature complement(5010840..5011298) /gene="mreD" /locus_tag="PA4479" /note="Cell shape-determining protein MreD [Cell wall/membrane/envelope biogenesis]; Region: MreD; COG2891" /db_xref="CDD:442136" gene complement(5011322..5012314) /gene="mreC" /locus_tag="PA4480" /db_xref="GeneID:881172" CDS complement(5011322..5012314) /gene="mreC" /locus_tag="PA4480" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="rod shape-determining protein MreC" /protein_id="NP_253170.1" /db_xref="GeneID:881172" /translation="MLAVLSVSLMVVDARFDYLEPVRSKLGMVLTPFYGLAEMPVRAW EGVRDQFSSRSELIAENERLKAESLLMQRRVQKLAALTEQNVRLRELLNSAALVDDKV LVSELIGVDPNPFTQRIMIDKGENDGVFVGQPVLDASGLMGQVVEVMPYTARVLLLTD TTHSIPVQVNRNGLRAIAVGTGNPERLELRYVADTADIKEGDLLVSSGLGQRFPAGYP VATVKEVIHDSGQPFAVVRAVPTAKMNRSRYVLLVFSDSRTPEQRANDAAEAQEEADK KAAAGAQAPQPAAQPAAAPSPATPAAQGAAQQPAAAPAPAPTQPAAPAANGGRR" misc_feature complement(5011517..5012311) /gene="mreC" /locus_tag="PA4480" /note="Cell shape-determining protein MreC [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]; Region: MreC; COG1792" /db_xref="CDD:441397" gene complement(5012394..5013431) /gene="mreB" /locus_tag="PA4481" /db_xref="GeneID:881165" CDS complement(5012394..5013431) /gene="mreB" /locus_tag="PA4481" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="rod shape-determining protein MreB" /protein_id="NP_253171.1" /db_xref="GeneID:881165" /translation="MFKKLRGMFSSDLSIDLGTANTLIYVRERGIVLNEPSVVAIRSH GSQKSVVAVGTEAKRMLGRTPGNIAAIRPMKDGVIADFSVCEKMLQYFINKVHENSFL QPSPRVLICVPCKSTQVERRAIRESALGAGAREVFLIEEPMAAAIGAGLPVEEARGSM VVDIGGGTTEIALISLNGVVYAESVRVGGDRFDEAIVTYVRRNYGSLIGESTAERIKQ EIGTAFPGGDVREVDVRGRNLAEGVPRSFTLNSNEVLEALQESLATIVQAVKSALEQS PPELASDIAERGLVLTGGGALLRDLDKLLAQETGLPVIVAEEPLTCVARGGGRALEMM DRHSMDLLSTE" misc_feature complement(5012403..5013416) /gene="mreB" /locus_tag="PA4481" /note="rod shape-determining protein MreB; Provisional; Region: PRK13927" /db_xref="CDD:237562" gene 5013671..5013961 /gene="gatC" /locus_tag="PA4482" /db_xref="GeneID:881166" CDS 5013671..5013961 /gene="gatC" /locus_tag="PA4482" /EC_number="6.3.5.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA amidotransferase subunit C" /protein_id="NP_253172.1" /db_xref="GeneID:881166" /translation="MALERSDVEKIAHLARLGLSEADLPRTTETLNNILGLIDQMQAV DTSGVEPLAHPLEATQRLRPDAVTETDHRDAYQTIAPAVEEGLYLVPKVIES" misc_feature 5013671..5013955 /gene="gatC" /locus_tag="PA4482" /note="Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit [Translation, ribosomal structure and biogenesis]; Region: GatC; COG0721" /db_xref="CDD:440485" gene 5013974..5015428 /gene="gatA" /locus_tag="PA4483" /db_xref="GeneID:881180" CDS 5013974..5015428 /gene="gatA" /locus_tag="PA4483" /EC_number="6.3.5.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA amidotransferase subunit A" /protein_id="NP_253173.1" /db_xref="GeneID:881180" /translation="MLHQLTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFIS ITDDLAIAQAKAADERRANGENGALLGAPIAHKDLFCTQGVRTSCGSKMLDNFVSPYD ATVVEKLTAAGAVTLGKLNMDEFAMGSSNQSSHYGAVKNPWSLDRVPGGSSGGSAAAV AARLLPAATGTDTGGSIRQPAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARTA EDCALMLGVMAGFDPKDSTSVEQPVDDYLAALQKPLSGLRIGLPREYFGAGLDSRIAD AVLAVVEELKTLGATVKDISLPNMQHAIPAYYVIAPAEASSNLSRFDGVRYGYRCDAP QNLEDLYKRSRAEGFGSEVKNRIMVGTYALSAGYYDAYYLQAQKIRRLIKNDFVSAFA EVDVILGPTTPNPAWKIGEKNDDPVSQYLEDIYTITANLAGLPGLSMPAGFVDGLPVG VQLLAPYFQEGRLLNVAHQYQQVSDWHTRTPAGF" misc_feature 5013977..5015419 /gene="gatA" /locus_tag="PA4483" /note="Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal structure and biogenesis]; Region: GatA; COG0154" /db_xref="CDD:439924" gene 5015535..5016980 /gene="gatB" /locus_tag="PA4484" /db_xref="GeneID:881181" CDS 5015535..5016980 /gene="gatB" /locus_tag="PA4484" /EC_number="6.3.5.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA amidotransferase subunit B" /protein_id="NP_253174.1" /db_xref="GeneID:881181" /translation="MQWETVIGLEIHAQLATQSKIFSGSSTAFGAAPNTQASLVDLAM PGTLPVLNEEAVRMACLFGLAIDARIDRQNVFARKNYFYPDLPKGYQTSQMDHPIVGK GHLDITLEDGTTKRIGITRAHLEEDAGKSLHEDFQGMSGIDLNRAGTPLLEIVSEPDI RSAKEAVAYVKAIHALVRYLGICDGNMAEGSLRCDCNVSVRPKGQAEFGTRAEIKNVN SFRFIEKAINHEIQRQIELIEDGGKVVQETRLYDPNKDETRSMRGKEEANDYRYFPCP DLLPVVIEPEYLAKLREQLPELPVQKRERFESQYGLSAYDASVLSASREMADYFEKVQ GICGDAKLAANWVMVELGSLLNKDGLEIEQSPVSAEQLGGMILRIKDNTISGKLAKMV FEAMANGEGSADQIIEAKGLKQVTDSGAIEKMLDEVLAANAEQVEQYRAADEAKRGKM FGFFVGQAMKASKGKANPQQVNELLKKKLEA" misc_feature 5015535..5016977 /gene="gatB" /locus_tag="PA4484" /note="Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit [Translation, ribosomal structure and biogenesis]; Region: GatB; COG0064" /db_xref="CDD:439834" gene 5017040..5017417 /locus_tag="PA4485" /db_xref="GeneID:881190" CDS 5017040..5017417 /locus_tag="PA4485" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253175.1" /db_xref="GeneID:881190" /translation="MPTPSAAARLALAVLPLFLAGCSSLAGSGSADTGEASYYGSRHA GLRTASGERYNPNAMTAAHRTLPFGARVRVTNLDNRRSVVVRINDRGPFRRGRIIDVS RKAAEGLGMIRSGVAPVRIESLD" misc_feature <5017121..5017414 /locus_tag="PA4485" /note="Peptidoglycan lytic transglycosylase RlpA, contains C-terminal SPOR domain [Cell wall/membrane/envelope biogenesis]; Region: RlpA; COG0797" /db_xref="CDD:440560" gene 5017449..5017835 /locus_tag="PA4486" /db_xref="GeneID:881191" CDS 5017449..5017835 /locus_tag="PA4486" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253176.1" /db_xref="GeneID:881191" /translation="MSEQGKTGLEIRREVMGDAFVERAMGNATAFTQPLQDFVNEHAW GSVWAREALPRKTRSLITLAALTALKCPQELKGHVRGALNNGCTVEEIREALLHCAVY AGVPAAIDAFRAAQEAIDTWQGEQPA" misc_feature 5017467..5017808 /locus_tag="PA4486" /note="alkylhydroperoxidase AhpD family core domain; Region: ahpD_dom; cl00460" /db_xref="CDD:469777" gene complement(5017960..5018751) /locus_tag="PA4487" /db_xref="GeneID:881218" CDS complement(5017960..5018751) /locus_tag="PA4487" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253177.1" /db_xref="GeneID:881218" /translation="MNRMSLAALLSCLPLVAWADNPVKLDTPVSGWRAGDGSAANYRQ VVNYPASSVNVAADQATTARIRGAIESQPKDRPATLVVNGVSMPLKVDADGSFDRPFA FPSGSNSVEVRNAAGQSRRVQFYHGGGGGEVPAKLRVLLSWDSDNTDLDLHLVTPDGD HVWYGNRSLANGATLDVDVTTGYGPEIIATPTPQKGPYLVYVNYFGGGYGSSEDGAEQ AAQDLTTARITLVTEEGTPNEKQETFLVPMRKPGELTLVKRFSYP" misc_feature complement(5017963..5018352) /locus_tag="PA4487" /note="Uncharacterized conserved protein YfaP, DUF2135 family [Function unknown]; Region: YfaP; COG4676" /db_xref="CDD:443712" gene complement(5018756..5020405) /locus_tag="PA4488" /db_xref="GeneID:881219" CDS complement(5018756..5020405) /locus_tag="PA4488" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253178.1" /db_xref="GeneID:881219" /translation="MIALRAWLVLLCAVPLLLRAAEAPVQLAWRTTQGYELVSLDRQR VLERRPLPADLQAPLGSLWKLFVFAWLSDTGQAEPPYTCQGRSREEVYCCENGQTIGR DRALVRSCGLYFEPQRLALRPEAWRGYWQARQAPAWLLDLERLQPQTRVPVKELLEQL QQLPAQGEARRVLLDVALQAGDGHAVASLGGRLRVKTWSWLDDHDPQARQGGFAGWLV DGTPLWLGGPGTSKMILDRYAEVLGRFLPSPWPADPGRCVEVNLFSRYPLRSVSDPSG HPAAEGLLHGPQQVLFANGNRLDIASAGDLFLQRVDGVPRLVARVSREEYVARVLERE ASAQPKEAARALAVTIRTYLLQNAAPRGECLAIDDSSQRQRVAPRPASAPTRRIAAWS ADLVLAGATVNYHSDQPGPARLSWKHAVEQAGQGLGYDSILAQAFPRSSLSRWDNPVA ACQPLPAAEDWLRKQRRQWRERLDREPGYEEIPSFSVCRLASGRPYVDRERERIFVRG LYSLQERLDLTHEYLHLAFRAHPSGQDENYIESLARRLLLE" misc_feature complement(5018765..5020396) /locus_tag="PA4488" /note="Uncharacterized conserved protein YfaQ, DUF2300 domain [Function unknown]; Region: YfaQ; COG5445" /db_xref="CDD:444196" gene complement(5020402..5024952) /locus_tag="PA4489" /db_xref="GeneID:881072" CDS complement(5020402..5024952) /locus_tag="PA4489" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253179.1" /db_xref="GeneID:881072" /translation="MSNLRRFSRSLAVAALVLLPFAAVQAEDTVEPSGYTPMAGESFF LLADSSFATDEEARVRLEAPGRDYRRYRMEPYGGVDVRLYRIEQPLEFLKRQKNLHRV LAEGQFKGEGLSNTLAYLWDNWYRKSRRVMQRAFSYESRQQVTEAVPELKMGNAMTAP TPYDAQPQYAPIPGLPLVSQFRYPLWDAKPIEPPQDVKLAGSSSEFINVVPGNVYIPL GKLKPGLYLVEALVGKYRATTVVFVSNSVAVSKVAGDELLVWTARKHEGTPVPDTKVL WTDGLGVMSSGNTDADGLLRLKHASPERSYVIGEDREGGVFVSENFYYDSEIYDTKIY AFTDRPLYRPGDWVSLKMVGREFKDARQSQAAASAPVRLSVIDASGTVLQSLDLRFDA KSGANGRFQLPENAVAGGYELRFDYRGQTYSSAFRVAEYIKPHFEVALDLAKPDFKTA EPVKGEIVLLYPDGKPVANARLQLSLRAQQLSMVDNELQYLGQFPVELSSTELTTDGK GRAAIELPPAEKPSRYMLTIFASDGAAYRVKTSKEILIERGAARYRLSAPQRFSAAGE KVEFSYASEQPTPLKPSSYQWIRLEDRATDSGPVADGRFALTFERPGTYSVELRDDKG QLLGATGHSVSGEGVKSVPGTVEVVFDKPEYRTGEEASALITFPEPVEDALLSLERDK VEATALLSKGADWLRLEKLNPTQYRVWIPVREEFSPNLTFSVLYTKGGDYSFQNAGIK VGMPQVEIDIATDKERYEPGETVTVTLATRFAGKPVSSHLTVSVVDEMVYALQAEIAP GIDQFFYHPRRNNVRTSASLAFISYDVALPGSTSAPGRANRSERGVKVLERPRREDVD TAAWQPELVTDAQGKASFSFRMPDSLTRWRITARAIDDNGQVGQKKQFLRSEKPLYLK WSGPTRFRQGDQPDLGLFVFNQGEQPVKAELLSGPPGSQRSQTLELAKGVNYIPLAQQ PLSDGDWSAELRQDGQVRDRLAVRFNLLADGWQVEQMQNLSLAAASNPLQLPADARDV RLRLADGPAAAYLGNLDDLLEYPYGGVEQTASQLLPLSIAYPALAGGEPRIRDRLRLI MQNSRLRLVQMAGPDAWFAWWGGDVDGDAFLTAYAYYADWYASRALEIQLPAEHWQRI LEPYAKQATQTPLLQRALILAFARDMQLPVNTLLGGLLNDLANAGEGQARAEPLEADD GLVLGDPDSAVGLAAARVLAVDLARQLRVAVPAPLAAQAETATQRLREAGLPFTDALL ASRSAVDGQQASALLQRLAPAQSTLERALALTWLQGALAQAPQGKLPQPPKDWQAQRG ASGETYWQWRGRGIPSWVDLDEAPARPLPVALSYRSAQAPSGQLPVQISRRLLRLVPG EGAFEFKVEEVGDKPLSSDELYLDEVTLNVPEDTALRYGMLELPLPPGADVERTTWGI KISGLAGDEATTLERARNEPGELFYGVPVDSLSGEQRFRHLVRFSQKGSFNLPPARYL RLYAPEQQALEAKPALAKVKVE" misc_feature complement(5020435..5024943) /locus_tag="PA4489" /note="Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only]; Region: YfaS; COG2373" /db_xref="CDD:441940" protein_bind 5022016..5022028 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4488" /bound_moiety="AmrZ" gene complement(5024979..5025617) /locus_tag="PA4490" /db_xref="GeneID:881073" CDS complement(5024979..5025617) /locus_tag="PA4490" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253180.1" /db_xref="GeneID:881073" /translation="MRRLTAFGLALLLLASGVARGEPAVTLDPQQSQVFRAWFVRIAQ EQLRQGPSPRWHQQDCAGLVRFAANEALKVHDGKWLRANGLSNRYLPPELALSPEQRR LAQNWQQGGGQVGPYVNAIKLVQFNSRLVGRDLNQARPGDLMFYDQGDDQHLMIWMGR SIAYHTGSSTPTDNGMRSVSLQQLMTWKDTRWIPDESNPNFIGIYRLAFLSQ" misc_feature complement(5024985..5025569) /locus_tag="PA4490" /note="Uncharacterized conserved protein YfaT, DUF1175 family [Function unknown]; Region: yfaT; COG3234" /db_xref="CDD:442466" gene complement(5025614..5027383) /locus_tag="PA4491" /db_xref="GeneID:881054" CDS complement(5025614..5027383) /locus_tag="PA4491" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253181.1" /db_xref="GeneID:881054" /translation="MSENNTPSPANGTPAPAAARTRSALWPVLGIVAALAAGGVLAWQ MGWLERLGGGRPAEEDLGQPIGAQAPAAADAPRAYRDLRKPDALIESVSLSRLPKEIL EVPLLRDTLTEDFVFYYENNGDRLGLTGTLRRIIYEHDLTLKDSLVEELLDQPAQVAL WRGADGRLRDFVVVLKRGGLARVLEPLAHIAADDQQLRKVGELAGTSVYRLRYGNDKA MLFLSKGDRLLLLSNPRMLFDDGGESDDSPLNAPASEDLEALLDGDELFPERFGLPGR GELRQRITLNASVLAMGYQRFIPSFAGVRFEKGEQGWSSYLALNEVERQPPLDFAPVW QAMPMGASACVALPVTPGLYGVMLERLGAEQKMAQAFSEHLSGAAGLCWYASSRLHSP LLVGQLSAPASAELDDELGKLFGRVIGAKEAKVEGGSFPVEDRVDGQTRRWTRQVSSN FGAYPASQADNPDSISGRAFFRIGMARHGQTLLFSLDDQLLGKALDTLDKRYPPLAEV LPKDALVPAYLAPQPLSELLQRETLDSLPQDMEPVFRNAADTYLMPRLKTLAGKGSYA LGLPAGSQANAPWQWLPLEWRSL" misc_feature complement(5025626..5027257) /locus_tag="PA4491" /note="Uncharacterized protein conserved in bacteria (DUF2138); Region: DUF2138; pfam09909" /db_xref="CDD:430919" gene complement(5027422..5028231) /locus_tag="PA4492" /db_xref="GeneID:881055" CDS complement(5027422..5028231) /locus_tag="PA4492" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253182.1" /db_xref="GeneID:881055" /translation="MRIFGSSAGCLSVLFGLAFGLPALAEPSVDLDGPTAGWRYSGLL EQPDAPRVAYPTPPIDRGGQRGRSLIEGHLRELVGTERAQRLVVNGNPLPLYTDGAGR FVRPYAFGHGSNGVQVGSADGKILKRVQFYEANRSQLPPRVRVVLGWDDPKAELDLHI VTPDGQHAYWAHPRLSNSGGLDPDGVDGPGPEMFTMGAPLHGTYLIYVNYWGNLNNQG YNFQAGSNVQDVITAQVNLVFNENSVDEKHETFVVPLRTIGDLVLVKTFTY" misc_feature complement(5027425..5027820) /locus_tag="PA4492" /note="Uncharacterized conserved protein YfaP, DUF2135 family [Function unknown]; Region: YfaP; COG4676" /db_xref="CDD:443712" gene complement(5028394..5028954) /gene="roxR" /locus_tag="PA4493" /db_xref="GeneID:881056" CDS complement(5028394..5028954) /gene="roxR" /locus_tag="PA4493" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator RoxR" /protein_id="NP_253183.1" /db_xref="GeneID:881056" /translation="MSEELLFEGEEQPHLLLVDDDPTFTRVLARAMSRRGLRVSTAGS AEEGLALAQQDTPDYAVLDLKMEGDSGLVLLPKLLELHADMRVVILTGYSSIATAVEA IKRGACNYLCKPADADDVLAALLSEHADLDTLVPENPMSVDRLQWEHIQRVLAEHEGN ISATARALGMHRRTLQRKLQKRPVRR" misc_feature complement(5028397..5028927) /gene="roxR" /locus_tag="PA4493" /note="DNA-binding response regulator, ActR/RegA family, consists of REC and Fis-type HTH domains [Signal transduction mechanisms, Transcription]; Region: COG4567" /db_xref="CDD:443624" gene complement(5028980..5030248) /gene="roxS" /locus_tag="PA4494" /db_xref="GeneID:881057" CDS complement(5028980..5030248) /gene="roxS" /locus_tag="PA4494" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="sensor histidine kinase RoxS" /protein_id="NP_253184.1" /db_xref="GeneID:881057" /translation="MRAPVFLLSASRQNLGRLLLIRILVLAAQAGSVGFAWLSDLLPL PWLALGLTLGLSACLILFTALRLRAPWPVTDQEYAVQLACDLIIHSTLLYYSGGSTNP FVSYYLVPLTIAAATLPWIYSMVLSGLALTGYTLLLIWYHPLHLQAVQHEAMLINLHL FGMWLNFALSAAFITFFVVKMSEALRWQAHMQAERREESMRDQQLLAVATQAAGAAHE LGTPLATMSVLLNELRQERPQDPTLQEDLALLQEQVKQCKHTLQQLVRAAEADRRQAI EEQSAAEWLESVLRRWHLMRPEASYRYQCLGLGSAPRLTPPTDLSQALLNLLNNAADA CPDDLDIRLDWDSSSICLSIRDHGVGVPLAIAEQIGKPFFTTKGKGFGLGLFLSQASV TRAGGTVKLYNHEDGGTLTELRLPRSYGMA" misc_feature complement(5028995..5030170) /gene="roxS" /locus_tag="PA4494" /note="ActS/PrrB/RegB family redox-sensitive histidine kinase; Region: ActS_PrrB_HisK; NF033792" /db_xref="CDD:468186" protein_bind 5029019..5029031 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4493" /bound_moiety="AmrZ" gene 5030525..5031235 /locus_tag="PA4495" /db_xref="GeneID:881066" CDS 5030525..5031235 /locus_tag="PA4495" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253185.1" /db_xref="GeneID:881066" /translation="MSAISRLAAAVTLCAASLSAVAEEAPRYNQVSLHAEVSQQVAHD LMQVTLYSENQGSDPAKLAAETTSVLNAAVADARKVKGVTISLGSRNSYPVYDDKGQK ITGWRERAELRLESSDFAALGQLSADLLGKLKMGGMDFSIADATRKKNEDQLMKGAVD AFKERAQLLTEALGGKGYKLVSLSVNSAGAPRPYPVMRMAAMKADASFGGAQAPEIEA GTSQVTVNADGVIEVQMP" misc_feature 5030525..5031226 /locus_tag="PA4495" /note="Predicted secreted (periplasmic) protein [Function unknown]; Region: COG3471" /db_xref="CDD:442694" gene 5031488..5033101 /locus_tag="PA4496" /db_xref="GeneID:881067" CDS 5031488..5033101 /locus_tag="PA4496" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_253186.1" /db_xref="GeneID:881067" /translation="MRRNAVIRSAIIPSLLGAALVAAVPQAFASNLIFCSEGSPAGFD PAQYTTGTDFDAAAETVFNRLTQFERGGTKVLPGLAESWDVSDDGKTYTFHLRKGVKF HSTDYFKPTREFNADDVLFTFERMLDKDHPFRKAYPTEFPYFTDMGLDKNIARVEKLD EHTVKFTLNEVDAAFIQNLAMPFPSIQSAEYAAQLLKQGKASDINQKPIGTGPFVFSR YQKDAQIRFKGNKDYWKPDEVKVDNLIFAINTDASVRAQKLKAGECQITLNPRPADLD ALKKDPNLNLPSQAGFNLGYIAYNVTHKPFDKLEVRQALDMAVNKKAIIDAVYQGAGQ LASNGMPPTQWSYDETIKDAPYDPAKARELLKKAGVAEGTEITLWAMPVQRPYNPNAK LMAEMLQNDWAKIGIKAKIVTYEWGEYIKRAKGGEHDAMLIGWSGDNGDPDNWLGTLY GCDAVDGNNFSKWCDAGYDKLVKDAKRTTDQGKRTELYKQAQHILKEQVPITPIAHST VYQPMRKTVHDFRISPFGLNSFYEVSVGK" misc_feature 5031578..5033047 /locus_tag="PA4496" /note="The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold; Region: PBP2_DppA_like; cd08493" /db_xref="CDD:173858" misc_feature order(5032733..5032735,5032745..5032747,5032784..5032795, 5032799..5032801) /locus_tag="PA4496" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:173858" gene 5033194..5034792 /locus_tag="PA4497" /db_xref="GeneID:881082" CDS 5033194..5034792 /locus_tag="PA4497" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_253187.1" /db_xref="GeneID:881082" /translation="MRPRSALRYSLLLLALAASAAIQAQPKTLAVCTEAAPEGFDPAR YTSGYTFDASAHPLYNALAAFAPGSATVIPALAESWDVSADGLVYTFRLRQGVKFHST DYFKPTREFDADDVLFSFQRMLDPQHPAHDLSPSGYPYADAMQLRDIIERIEKIDEHQ VRFVLKHPEAPFLADLAMPFGSILSAEYAGQLIARGKGDELNSKPIGTGPFVFTRYRK DAQVRYAANPDYWKGKPAIDHLVLAITLDPNVRVQRLRRNECQIALTPKPEDVAALRQ DPQLTVLEEAAMITSHAAINTRHEPFDDPRVRRAIAMGFNKSSYLKIVFGDQARPAIG PYPPMLLGYDDSIRDWPYDPERAKALLKEAGVTPDTPLNLYISTGSGPGGNPARVAQL IQSDLAAIGIRVNIRQFEWGEMVKRTKAGEHDMMLYSWIGDNGDPDNFLTHNLGCASV ESGENRARWCDKGFDEAIRKARMSNDESQRVALYKEAQRIFHEQMPWLPLAHPLMFDA QRKNVSGYRMSPMSARDFSRVKLD" misc_feature 5033275..5034741 /locus_tag="PA4497" /note="The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold; Region: PBP2_DppA_like; cd08493" /db_xref="CDD:173858" misc_feature order(5034424..5034426,5034436..5034438,5034475..5034486, 5034490..5034492) /locus_tag="PA4497" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:173858" gene complement(5034860..5036077) /locus_tag="PA4498" /db_xref="GeneID:881083" CDS complement(5034860..5036077) /locus_tag="PA4498" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="metallopeptidase" /protein_id="NP_253188.1" /db_xref="GeneID:881083" /translation="MTVGVGGSTPAQALERLRNMMDGAQPIGLASYRARIAAAQAWMG EHGIAAAYLHAGSNLRYFSGVQWHPSERLVGALLPAEGALEYLAPAFEEGTVRDFQVV DGAIHTWEEHQDPYRLLLDRLEALGVGERSTVALCPSLPFGMFERLRQQAPGRNFVSA APLIDQGRMRKSAEELALMQRAKDMTLEVQKAAASILREGISTTEVAEFIHQAHRKVG APGSTFCIVLFGAASAFPHGVKHAQVLKDGDMVLIDTGCQVHGYQSDITRSYVFGTPS ARQREFWGMERDAQLAAFEAARLGQPCEAVDAAARRSLEANGLGPDYRLPGLPHRTGH GIGMDVHEGPYLVRGDRTPLDVGMCFSNEPMICVPGEFGIRLEDHFYMTKEGPRWFTQ PSPSIDDPFGLGG" misc_feature complement(5034881..5035969) /locus_tag="PA4498" /note="Xaa-Pro aminopeptidase [Amino acid transport and metabolism]; Region: PepP; COG0006" /db_xref="CDD:439777" gene 5036245..5036808 /locus_tag="PA4499" /db_xref="GeneID:881061" CDS 5036245..5036808 /locus_tag="PA4499" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253189.1" /db_xref="GeneID:881061" /translation="MTVDRIGERLRRYRRAAKKTLHQVASESGLTASFLSQAERNLTG VSISSLANIAKSLNIPLNALFDQPAQPQPDSHEGERVRYTIEGQPLAYERLSSSFPGN LINAVKMNMPVGYQSELISHEGAEFSYVLSGQIVYTIEGRQYPLGAGDSVHFDATKTH CLANVGSDVAEVLTITTMGLFDDHPTP" misc_feature 5036245..5036469 /locus_tag="PA4499" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" misc_feature 5036518..5036775 /locus_tag="PA4499" /note="XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain; Region: cupin_XRE_C; cd02209" /db_xref="CDD:380339" misc_feature order(5036518..5036520,5036563..5036565,5036569..5036571, 5036599..5036601,5036608..5036610,5036620..5036622, 5036722..5036724,5036728..5036730,5036764..5036766) /locus_tag="PA4499" /note="putative active site [active]" /db_xref="CDD:380339" gene 5037074..5038675 /locus_tag="PA4500" /db_xref="GeneID:881062" CDS 5037074..5038675 /locus_tag="PA4500" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_253190.1" /db_xref="GeneID:881062" /translation="MRKILPLRAWLAAGLILGSPFSHAASNLVFCSEGSPAGFDPAQY TTGTDYDATSVTLFNRLVQFERGGTRAIPALAESWDIGDDGKTYTFHLRKGVKFHSTD YFKPTREFNADDVLFTFQRMLDKNHPFRKAYPTEFPYFTDMGLDKNIARVEKLDEHRV KFTLNEVDAAFIQNLAMDVASIQSAEYAGQLLEAGKPQQINQKPIGTGPFILSRYQKD AQIRFKGNKDYWKPEDVKIDNLIFSINTDAAVRAQKLKAGECQITLNPRPADLKALQE AANLKVPSQPGFNLGYIAYNVTHKPFDQLEVRQALDMAVNKQAIIDAVYQGAGQLAVN GMPPTQWSYDETIKDAPFDPAKARELLKKAGVAEGTEITLWAMPVQRPYNPNAKLMAE MIQADWAKIGIKARIVSYEWGEYIKRAHAGEHDAMLFGWTGDNGDPDNWLATLYGCDS INGNNVSKWCDAAYDKLVKAAKRVSDQDKRSELYKQAQHILKEQVPITPIAHSTVYQP MSKSVHGFKISPFSRNAFYGVANQP" misc_feature 5037152..5038621 /locus_tag="PA4500" /note="The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold; Region: PBP2_DppA_like; cd08493" /db_xref="CDD:173858" misc_feature order(5038307..5038309,5038319..5038321,5038358..5038369, 5038373..5038375) /locus_tag="PA4500" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:173858" gene 5038901..5040355 /gene="opdP" /locus_tag="PA4501" /db_xref="GeneID:881095" CDS 5038901..5040355 /gene="opdP" /locus_tag="PA4501" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycine-glutamate dipeptide porin OpdP" /protein_id="NP_253191.1" /db_xref="GeneID:881095" /translation="MMRNQRVTSATLGLALLAASAPGWAADEQENPPAPDNPSYAAEV QSIPSVAKPIKGQAGATGLVEGQSLTLTTRNFYSRENMKDSFTFRIPKAGGGSQRIHQ RNAWVQGTVLKYSSGYTQGTVGFGFDVAAFNEIALERGKGRIGGGGNRTLANSDGEAL GEWSKLGVANIRLRASNTEFKAGRFLVNTPVFSYIDNRALPSSFTGFAVTSEELDNLS LQAGSFRKVSPRTGSGDEDMTTEYGTRQVKGDRLNYLGGNYKPLDGLEISLYGSHFQD VWNQYYLGVTHDIGDLENGIALRTAFNGYHTGDTGAREAGYIDNDTWSLAFTLGHRAH ALTLAYQQVDGNEYFDYVHETSAIFLANSMLADYNSPNEKSAQIRYETDWSYYGVPGL STGVWYVKGWDIDGTHYDGDRNGAYGNYAEVRAQDGEKHHELGLMAAYKVQNGPIKDS TFKLTYMMHKASQNQIDGSVNELRLVSTFPFNLL" misc_feature 5039084..5040346 /gene="opdP" /locus_tag="PA4501" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene 5040405..5042000 /locus_tag="PA4502" /db_xref="GeneID:881096" CDS 5040405..5042000 /locus_tag="PA4502" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_253192.1" /db_xref="GeneID:881096" /translation="MLHPLLRHLPLALALCAAGAAQAKNLVVCTEASPEGFDIVQYTG AVTADASAETVFNRLLAFRPGTTEVIPGLAERWDVSADGLSYTFHLRPGVKFHTTDYF KPTRSLNADDVLWTFQRALDPKHPWHASALRGYAYFDAMGMGELIKSVEKVDELTVRF VLNRPEAPFLRDMAMPFASIYSAEYGDQLLAAGKLGQLNNQPIGTGPFVFKRYAKDAQ VRYTANPDYYAGKPPIDNLVFAITLDPNVRMQKVRAGECQVSLYPKPEDVPRLKQDPN LAVDEIDALLTTYIAINTQHKPLDDPRVRQAINLALDKKAMLDAVFGPGAASPAVGPY PPTLLGYNHSIQDWPHDPERARALLKEAGAENLRITLFIRNGTSPTIPNPALAAQMLQ ADLAKAGIQLTIRSLEWGELLKRSKAGEHDLSLLGWAGDNGDPDNFLSPNLSCAAAES GENQARWCDKDFEALMRKAREVSDPAERAKLYEQAQVVFHEQAPWIPLAYPKLFNVRR NTVQGYVINPLSNNNFATTSVKP" misc_feature 5040477..5041946 /locus_tag="PA4502" /note="The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold; Region: PBP2_DppA_like; cd08493" /db_xref="CDD:173858" misc_feature order(5041629..5041631,5041641..5041643,5041680..5041691, 5041695..5041697) /locus_tag="PA4502" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:173858" gene 5042068..5043078 /locus_tag="PA4503" /db_xref="GeneID:881080" CDS 5042068..5043078 /locus_tag="PA4503" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_253193.1" /db_xref="GeneID:881080" /translation="MLSFIARRLGLLIPTFFGVTLLTFALIRLIPGDPVEVMMGERRV DPQMHAEALHRLGLDKPLYQQYLDYVGNLAQGNLGKSIRTHEPVWNEFLTLFSATLEL SFAAMLFAGTLGLLAGVVAALKRGSIFDHGVMTISLAGYSMPIFWWGLLLIMLFSVSL GWTPVSDRIGVLYEVEPKTGFMLIDTLLSDEEGAFLDAVRHLILPAIVLGTIPLAVIA RMTRSAMLEVLREDYVRTARAKGLSPARVVFVHALRNALIPVLTVLGLQVGTLLAGAV LTETIFSWPGIGKWLIDAISARDYPVVQNGILLVATLVILVNFVVDILYGLANPRIRH QR" misc_feature 5042068..5043075 /locus_tag="PA4503" /note="Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2; cl00427" /db_xref="CDD:444901" misc_feature order(5042401..5042406,5042413..5042418,5042431..5042433, 5042464..5042475,5042479..5042508,5042515..5042520, 5042524..5042526,5042701..5042706,5042710..5042712, 5042716..5042718,5042725..5042730,5042734..5042736, 5042746..5042751,5042758..5042760,5042809..5042811, 5042851..5042856,5042863..5042865,5042884..5042895, 5042902..5042907,5042932..5042937,5042965..5042970, 5042977..5042982,5042986..5042991,5042998..5043003, 5043010..5043015) /locus_tag="PA4503" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature order(5042482..5042526,5042884..5042901) /locus_tag="PA4503" /note="conserved gate region [active]" /db_xref="CDD:119394" misc_feature order(5042524..5042526,5042686..5042688,5042902..5042904, 5042926..5042928,5042935..5042937,5042965..5042967) /locus_tag="PA4503" /note="putative PBP binding loops [active]" /db_xref="CDD:119394" misc_feature order(5042761..5042799,5042815..5042820,5042830..5042832) /locus_tag="PA4503" /note="ABC-ATPase subunit interface [active]" /db_xref="CDD:119394" gene 5043090..5044001 /locus_tag="PA4504" /db_xref="GeneID:881081" CDS 5043090..5044001 /locus_tag="PA4504" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_253194.1" /db_xref="GeneID:881081" /translation="MNAMHNAPASDPSLVYPSPLKEFWQAFTRNKGAVGGLLFMLLIV FCALFAPWVAPYDPSEQFRDFLLTPPSWLEGGQARFLLGTDELGRDLLSRLIHGARLS LLIGLSSVVISLVPGILLGLLAGFSPNRAGPLIMRLMDIMLALPSLLLAVAIVAILGP GLINTVIAIAIVSLPAYVRLTRAAVMTELNRDYVTASRLAGAGTLRLMFVCVLPNCMA PLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLT ILLSVLAINLMGDGLRDALDPKLKNAA" misc_feature 5043141..5043989 /locus_tag="PA4504" /note="dipeptide ABC transporter permease DppC; Region: PRK10913" /db_xref="CDD:182833" gene 5044054..5045028 /locus_tag="PA4505" /db_xref="GeneID:881158" CDS 5044054..5045028 /locus_tag="PA4505" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_253195.1" /db_xref="GeneID:881158" /translation="MSLLDIKNLSVRFGDTTAVPVVDGLDLSVDKGEVLAIVGESGSG KSVTMMALMGLIDAPGWVSADHLRFDGHDMLTLKGRQRRRIVGKDMAMVFQDPMTALN PSYTVGYQIEEVLRLHLGLRGKALRQRALELLERVEIPAAASRLDAYPHQLSGGMSQR VAIAMAIAAEPKLLIADEPTTALDVTIQAQIMELLLNLQRDQDMALILITHDLAVVAE TAQRVCVMYAGEAVEIGGVPALFDRPTHPYTEALIKAIPEHCAGEARLATLPGIVPGR YDRPRGCLLSPRCPYAQEHCRQERPALETHERGAVRCFYPLNLLNEVA" misc_feature 5044060..5045001 /locus_tag="PA4505" /note="ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism, Inorganic ion transport and metabolism]; Region: DppD; COG0444" /db_xref="CDD:440213" gene 5045028..5045999 /locus_tag="PA4506" /db_xref="GeneID:881159" CDS 5045028..5045999 /locus_tag="PA4506" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="peptide ABC transporter ATP-binding protein" /protein_id="NP_253196.1" /db_xref="GeneID:881159" /translation="METVLTARDLTRHYEVSRGLFKGHAQVRALNGVSFELEAGKTLA VVGESGCGKSTLARALTLIEEPTSGSLKIAGQEVKGASKDQRRQLRRDVQMVFQNPYA SLNPRQKIGDQLAEPLLINTALSREERREKVQQMMRQVGLRPEHYQRYPHMFSGGQRQ RIALARAMMLQPKVLVADEPTSALDVSIQAQVLNLFMDLQQQFRTAYVFISHNLAVVR HVADDVLVMYLGRPAEMGPADKLYENPLHPYTRALLSATPAIHPDPTKPKIRIQGELP NPLNPPEGCAFHKRCPYATERCRSEVPELRLLDQRQVACHHAEQFLG" misc_feature 5045028..5045996 /locus_tag="PA4506" /note="dipeptide transporter ATP-binding subunit; Provisional; Region: dppF; PRK11308" /db_xref="CDD:236898" misc_feature 5045166..5045189 /locus_tag="PA4506" /note="Walker A/P-loop; other site" /db_xref="CDD:213224" misc_feature order(5045175..5045180,5045184..5045192,5045319..5045321, 5045559..5045564,5045661..5045663) /locus_tag="PA4506" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:213224" misc_feature 5045310..5045321 /locus_tag="PA4506" /note="Q-loop/lid; other site" /db_xref="CDD:213224" misc_feature 5045487..5045516 /locus_tag="PA4506" /note="ABC transporter signature motif; other site" /db_xref="CDD:213224" misc_feature 5045547..5045564 /locus_tag="PA4506" /note="Walker B; other site" /db_xref="CDD:213224" misc_feature 5045571..5045582 /locus_tag="PA4506" /note="D-loop; other site" /db_xref="CDD:213224" misc_feature 5045649..5045669 /locus_tag="PA4506" /note="H-loop/switch region; other site" /db_xref="CDD:213224" gene complement(5046032..5046664) /locus_tag="PA4507" /db_xref="GeneID:881099" CDS complement(5046032..5046664) /locus_tag="PA4507" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253197.1" /db_xref="GeneID:881099" /translation="MDTSAFLIALAVVYLVPGPDMLLLFQTGARQGRRAALVTALGLA LARACHVLMAATGLALLFRTAPWTFDLVRLLGAVYLAWLGLQMLRGGGLALPTSDAGS APVVPHADRRALLRGLLTNLLNPKALLFCSVLLPQFVSPEAGSLAVQFAALGTVLVLV GLAFDCAYALAGGRLGRWLASRPRAQRLQQWGFGGLLIGFGVRLALLRQL" misc_feature complement(5046041..5046652) /locus_tag="PA4507" /note="Threonine/homoserine/homoserine lactone efflux protein [Amino acid transport and metabolism]; Region: RhtB; COG1280" /db_xref="CDD:440891" gene 5046806..5047279 /locus_tag="PA4508" /db_xref="GeneID:881100" CDS 5046806..5047279 /locus_tag="PA4508" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253198.1" /db_xref="GeneID:881100" /translation="MKLDAYDHRILAALQRDGRLSNVQLAEEIGLSPSPCLRRVRLLE EAGVIRGYQASIDRDEVGLGLTVFVGIKVERHRQEQAEAFHRAVVDLPEVISVHLVSG ESDFLLQVVVPDLRAYERLLSETLLRLPGVSDIRSNFAIKTVKAPAPLPLGHLAG" misc_feature 5046806..5047228 /locus_tag="PA4508" /note="DNA-binding transcriptional regulator, Lrp family [Transcription]; Region: Lrp; COG1522" /db_xref="CDD:441131" gene complement(5047284..5048213) /locus_tag="PA4509" /db_xref="GeneID:881129" CDS complement(5047284..5048213) /locus_tag="PA4509" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253199.1" /db_xref="GeneID:881129" /translation="MNGLRVVKAGPQSLLQDDGRRGWQHLGVSPGGPLDRQAAAWANR LLGNPWGAPLLEIAFGGLVLECTVEATWLALTGARLALTVDGRECLPWSRFRVRRGQR IELGFAEAGQRAYLACAGGFRAKPVLGSIACQVRDGLGGLRGDGRILAEGDCLPCVEA GAACPWDASVPWRFQPDYRQQRPLRVLLGGDAAAFDAASRRAFFASAWRISPRSDRMG VRLAGEPLRGASRAWSQGVVEGAIQVPPDGQPIVLMADRQSMGGYPLLGFVHPLDLSR LAQSPAHSEVTFVESDLATQQADLLRFYRFFRG" misc_feature complement(5047344..5048207) /locus_tag="PA4509" /note="5-oxoprolinase subunit C/Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]; Region: PxpC; COG1984" /db_xref="CDD:441587" gene complement(5048210..5048887) /locus_tag="PA4510" /db_xref="GeneID:881130" CDS complement(5048210..5048887) /locus_tag="PA4510" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253200.1" /db_xref="GeneID:881130" /translation="MIRIEPAGAEALLLTLAEEPEVDLSVRLAELARRLREGLGEGVR DLVPGWTTLMLHYDPYRIASQILEERLGPLLAEWHAWRPAEDAGRLHEIPVWYAGEDL ATVAVACGLTGEGVIELHSAAEYRVGAIGFAPGFAYLGGLDPRLVLPRRATPRARVPA GSLAIAEAQTAIYPQASPGGWHLLGRSPWRPFDPAATPPCPLALGDRVRFVAIGREAF LDLGGRE" misc_feature complement(5048216..5048887) /locus_tag="PA4510" /note="5-oxoprolinase subunit B/Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]; Region: PxpB; COG2049" /db_xref="CDD:441652" gene complement(5048884..5049639) /locus_tag="PA4511" /db_xref="GeneID:881154" CDS complement(5048884..5049639) /locus_tag="PA4511" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253201.1" /db_xref="GeneID:881154" /translation="MNDTGRRILLNCDMGESFGAWRMGDDVHSMPLVDQANLACGFHA GDPLTMRRAVELAVRHGVSIGAHPAYPDLSGFGRRSLACSAEEVHAMVLYQIGALDAF CRSLGTQVAYVKPHGALYNDLVGDDELLRAVLDACAAYRKGLPLMVLALADNGRELEL ADEADVPLLFEAFADRAYLPDGRLAPRRLGGAVHHDPQRIIEQALAIARGEAFPDYDG NPLRLTADSLCVHGDNPQSLAVLRRLRAALDSL" misc_feature complement(5048896..5049618) /locus_tag="PA4511" /note="LamB/YcsF family of lactam utilization protein; Region: LamB_YcsF_like; cd10787" /db_xref="CDD:212099" misc_feature complement(order(5048947..5048949,5049079..5049081, 5049088..5049090,5049112..5049114,5049121..5049123, 5049277..5049279,5049289..5049294,5049298..5049300, 5049406..5049408,5049439..5049441,5049601..5049603)) /locus_tag="PA4511" /note="putative active site [active]" /db_xref="CDD:212099" protein_bind complement(5049684..5049696) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 5049769..5050668 /gene="lpxO1" /locus_tag="PA4512" /db_xref="GeneID:881155" CDS 5049769..5050668 /gene="lpxO1" /locus_tag="PA4512" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="lipopolysaccharide biosynthetic protein LpxO" /protein_id="NP_253202.1" /db_xref="GeneID:881155" /translation="MKVLILAAYALSILYVHFRGRVRHKLSRQLSDHSSFLAPINCLM YLFSKVPNRPYLAPQTFPELQVLVDNWQAIRSEALHLHDAGNIKRSEQYDDIGFNSFF KSGWKRFYLKWYDEAHPSAGQLCPQTTALLRQIPSVKAAMFAELPPGSKLVRHRDPYA GSLRFHLGLFTPNDPACFIEVDGERYHWRDGEAVVFDETFIHYAENATEHNRIILFCD IERPLTQGWATAFNRWFSRNVMAAAAAPNNAGDRTGGLNRIFDSLYKIRLQGKRLKKR NRKLYYLQKWGFFALVLAFILWI" misc_feature 5049772..5050662 /gene="lpxO1" /locus_tag="PA4512" /note="Aspartyl/Asparaginyl beta-hydroxylase; Region: Asp_Arg_Hydrox; cl42444" /db_xref="CDD:478204" gene complement(5050848..5053400) /locus_tag="PA4513" /db_xref="GeneID:881111" CDS complement(5050848..5053400) /locus_tag="PA4513" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_253203.1" /db_xref="GeneID:881111" /translation="MKKVWFQLHWFFGISAGLVLALMGVTGATLSFQDELMRALNPDV LVVQKRPEGVLPLDELVRRIEGAEPGRKVAFVWVEMDSDKAGRIFYTPPPGQRRGESR WIDPYTGAFVGEPRGEGFFNLMMQLHRFLAMGEYGKQVTAACTLILIFFCLSGLYLRW PRKVFDWRAWLTLDWSRKGRSFNWDLHAVAGTWCLALYLLAALTGLYWSYEWYRNGLF KLLDDAPAGQQAQRGKPGGRGERPADAAPLVVDYAAVWNSIRQAGGDRLQAYNLRLPP AGGQPATVFYRLTDAPHERAFNTLTLDPANGQVKSDQRYSDRSFGSQLLASVYALHVG SYFGMAGRILMMLASLAMPLFFITGWLLYLDRRRKKRAVRASRADLGGSAGASGEPWL IGYASQSGFAEQLAWQSAGQLQAAGLPVRVESLARLDAGQLAEARKALFVVSTFGDGE APDSARGFERKVLGQAASLDGLSYALLALGDRQYEQFCGFARRMQGWLQGQGARSLFA PVEVDDGDAAALRQWQESLAEVTGGAAPAAWEAPAFEVWSLARRECLNPGSQGESTWL LDLRAPANSAIQWRAGDLLEIVPHQAPVRIREWLQRHNLDGQARVAVEGVEQSLEQAL AGRLLPDSFEHLVGLHPQALLDALIPLSVRQYSIASLQSDGDLQLIVRQEQHADGSLG ICSGWLTEYLPLGAALTLRLRRNAGFHLPEDDVPLILIGNGTGLAGLRSLLRASIAAG RKRNWLLFGERNFAHDYYCRAELEQALARGELQRLDLAFSRDQAEKIYVQDRLHEAAD ELRRWIDEGAALYVCGSLQGMAGGVDRVLREVLGEEALQRLADEGRYRRDVY" misc_feature complement(5052309..5053400) /locus_tag="PA4513" /note="PepSY-associated TM region [Function unknown]; Region: PiuB; COG3182" /db_xref="CDD:442415" misc_feature complement(5051841..5052224) /locus_tag="PA4513" /note="Region: Flavodoxin_1; pfam00258" /db_xref="CDD:425562" misc_feature complement(5050851..5051762) /locus_tag="PA4513" /note="Cytochrome p450- like alpha subunits of E. coli sulfite reductase (SiR) multimerize with beta subunits to catalyze the NADPH dependent reduction of sulfite to sulfide. Beta subunits have an Fe4S4 cluster and a siroheme, while the alpha subunits (cysJ...; Region: SiR_like1; cd06200" /db_xref="CDD:99797" misc_feature complement(order(5051346..5051357,5051385..5051387, 5051391..5051393,5051430..5051441,5051649..5051651)) /locus_tag="PA4513" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99797" misc_feature complement(order(5051430..5051435,5051439..5051441)) /locus_tag="PA4513" /note="FAD binding motif [chemical binding]; other site" /db_xref="CDD:99797" misc_feature complement(order(5050851..5050853,5050857..5050859, 5050962..5050964,5051430..5051432)) /locus_tag="PA4513" /note="catalytic residues [active]" /db_xref="CDD:99797" misc_feature complement(order(5050944..5050946,5051031..5051033, 5051037..5051039,5051058..5051063,5051148..5051153, 5051229..5051231,5051235..5051237,5051376..5051387)) /locus_tag="PA4513" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99797" misc_feature complement(order(5051337..5051339,5051346..5051348, 5051355..5051357)) /locus_tag="PA4513" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99797" misc_feature complement(order(5051217..5051219,5051223..5051234, 5051244..5051246)) /locus_tag="PA4513" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99797" protein_bind complement(5053498..5053516) /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA4513" /bound_moiety="Fur" gene complement(5053616..5055877) /locus_tag="PA4514" /db_xref="GeneID:881112" CDS complement(5053616..5055877) /locus_tag="PA4514" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="iron transport outer membrane receptor" /protein_id="NP_253204.1" /db_xref="GeneID:881112" /translation="MSRQSTDTAVSSQRLLASAIGVAITAIAAPQAAQADEAGQKKTD KDRVLSLDAATIVGEQQDETTYNVDRSASKKYTAPLLDTPKTVTVIPQQVIKDTGALT LADALRTTPGITFGAGEGGNPAGDRPFIRGFNAESDTFLDGMRDVASQTREVFNVEQI EVSKGPGSAYTGAGSTGGSLNLISKTAKQDNFTDAGFTWGSDQTRRTTLDVNRMIGDN AAFRLNLMKHDAHVAGRDEVSVSRWGVAPTVTFGFDTPTRATLSYYHLSTDDMPDYGL PLTNVNRSKANPSKPASVDRDNFYGLKDRDYRKSTTDSGTFRIEHDLNDNLTLSNSTR LVRTTLDYIVSNPDDSRGNVANGYVYRSAKSRNSTSKGWVNQTDLKANFETGFIKHTL VTGLEFSYEDVHNRPYAITSGGGAGNTCNARLLASGDCTSLNRPTPGDNWTGSITDGL AYTDTDTKTSAAYVFDTLKLSEQWELNLGLRYDDFDTKSSGYQTAGRNGPAGYFKREN NSHFWNYQTGLVYKPAPNGSIYLAWSTSSNPTGETGGEGQADISVGNNGLDPERNRNL ELGTKWAFFDDALSLNAALFRTDKTNARVASPDVSTLQVLDGEQRVQGVELGFNGKLT EKWKVFGGYTYLDSEIRKSTVKSDEGNKMPQTAQNNFTLWTTYDLLQNFTIGGGTTYV DKQYGNTANSTYIPSYWRYDAMASYKVSKNVDLQLNVQNLTDKRYFDQVYSTHMAHVA PGRTALLGVNFHF" misc_feature complement(5053619..5055655) /locus_tag="PA4514" /note="Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; Region: Fiu; COG4774" /db_xref="CDD:443806" protein_bind 5053774..5053786 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 5056043..5056061 /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA4515" /bound_moiety="Fur" protein_bind complement(5056049..5056067) /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA4515" /bound_moiety="Fur" gene 5056095..5056775 /locus_tag="PA4515" /db_xref="GeneID:881121" CDS 5056095..5056775 /locus_tag="PA4515" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hydroxylase" /protein_id="NP_253205.1" /db_xref="GeneID:881121" /translation="MLLHIPAIFTAEEVSRIRAALEQAEWADGKATAGYQSAKAKHNL QLPQDHPLAREIGEAMLQRLWNHPLFMSAALPLKVFPPLFNCYTGGGSFDFHIDNAVR DVHGGRERVRTDLSSTLFFSDPEDYDGGELVIQDTYGLQQVKLPAGDLVLYPGTSLHK VNPVTRGARYASFFWTQSLVREDSQRTLLFEMDQSIQRLTRDVPDHPSLIRLTGTYHN LLRRWSEL" misc_feature 5056098..5056772 /locus_tag="PA4515" /note="Predicted 2-oxoglutarate- and Fe(II)-dependent dioxygenase YbiX [General function prediction only]; Region: PiuC; COG3128" /db_xref="CDD:442362" gene 5056778..5057593 /locus_tag="PA4516" /db_xref="GeneID:881122" CDS 5056778..5057593 /locus_tag="PA4516" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253206.1" /db_xref="GeneID:881122" /translation="MRHLLLRHDALDAEGFAAQLAGTPGEVAQAILGAAREGLTEAQA LLGQILLDGQGIQRDPTLARTWFTIAAERGHAMARNMLARCLEHGWGGPADPAAAAVH YRIAAQAGLDWARYNLANLHATGRGVPQDQPRAYALYRQAAEQGHAKSMNLVGRYHEE GLVVARDLAQAAHWYRRSAEGGDFRGQFSHAAMLSASGRHAEAETWLRRALEGGNLNF LRSARHGLEQSAHPPFRSLALAYYRRAAQLGDDIDREALEQALERHGHAQLPV" misc_feature 5056805..5057413 /locus_tag="PA4516" /note="TPR repeat [General function prediction only]; Region: TPR; COG0790" /db_xref="CDD:440553" misc_feature 5056952..5057041 /locus_tag="PA4516" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" misc_feature 5057060..5057149 /locus_tag="PA4516" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" misc_feature 5057168..5057257 /locus_tag="PA4516" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" gene 5057716..5059518 /locus_tag="PA4517" /db_xref="GeneID:881088" CDS 5057716..5059518 /locus_tag="PA4517" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253207.1" /db_xref="GeneID:881088" /translation="MSPTPPSVTRNRIDWAGLGWLFLFFWFFSGITQLLLLTSGNSGF SGFRNAMVLSTIWLAPVLLFPRWTKPLAAVIGLVLWAASLVGLSYFGIYHQEFSQSVI FVMFESNTAEASEYFSQYFNPWMTLGLVLYSLVAILLWRRLRPVYLPRFSALPVAVLL IVATIGYPFYKQLVSQGRPFDEALDKVQARMEPAVPWQLLIGYQQYRQQLGSMQALLQ KNAALPPLKNLVDANGDTPRTLVLVIGESTSRKHMSLYGYPRETTPQLDALKAANRNL TVFNNVVASRPYTIEVLQQVLTFADQEHPDRFLTDPSLMNLMKQAGYKTFWITNQQTM TKRNTMLTTFAQQTDAQFYLNNQRSQNASQLDGAVLAPFAKVLDDPAPKKFIVVHLLG THMNYKYRYPADYARFVDRQGAPAALSDDQVEVYNSYDNAVLYNDYVVSSLIKGFANS DPNGFLVYLSDHGEEVFDEAPHDRLGRNEGDPTRGMYTVPFLVWTSPSWQQTHPRDLQ ALVDRRYSSEDLIHTWSDLAGLNYDLFDPTKSLVSNDFRHEVRWIGNPYAHNGLRDFD KLPLDKADAGQQVAQAGRPAPTTPRAPSRQPNEG" misc_feature 5057800..5059419 /locus_tag="PA4517" /note="phosphoethanolamine transferase CptA; Region: CptA; NF012179" /db_xref="CDD:333729" misc_feature order(5058451..5058453,5058580..5058582,5058895..5058897, 5059096..5059101,5059144..5059146) /locus_tag="PA4517" /note="putative active site [active]" /db_xref="CDD:293741" misc_feature order(5058451..5058453,5058580..5058582,5058895..5058897, 5059099..5059101) /locus_tag="PA4517" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:293741" misc_feature order(5058670..5058672,5058709..5058711,5059141..5059149) /locus_tag="PA4517" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:293741" gene complement(5059574..5059999) /locus_tag="PA4518" /db_xref="GeneID:881089" CDS complement(5059574..5059999) /locus_tag="PA4518" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253208.1" /db_xref="GeneID:881089" /translation="MTGNGVSLVTLGVADLARSSLYYQALGWQPSSDGNEQVVFLKGR NLVLGLYGRSALAEDAQVEDRPTGFAAITLACNCASRDEVDRLFSAATAAGGQATKMP QEVFWGGYSGYVADPDGHLWEIAYNPFWPFDEQGNLVLP" misc_feature complement(5059619..5059978) /locus_tag="PA4518" /note="uncharacterized subfamily of vicinal oxygen chelate (VOC) family; Region: VOC_like; cd07251" /db_xref="CDD:319914" gene complement(5060115..5061278) /gene="speC" /locus_tag="PA4519" /db_xref="GeneID:881118" CDS complement(5060115..5061278) /gene="speC" /locus_tag="PA4519" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="ornithine decarboxylase" /protein_id="NP_253209.1" /db_xref="GeneID:881118" /translation="MSIKVEDYFAPETFQRMKAFADKQETPFVVIDKQTIADAYDQLT DCFPFARIYYAVKANPATEITELLRDKGSNFDIASIYELDKVMKTGVGPERISYGNTI KKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVRILTEGSTTADWPLSRKFG CQTDMAMDLLILARQLGLEPYGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIV LKMINMGGGFPANYITKTNDLETYAEEIIRFLKEDFGDDLPEIILEPGRSLIANAGIL VSEVVLVARKSRTAVERWVYADVGKFSGLIETMDESIKFPIWTEKQGEMEEVVIAGPT CDSADIMYEHYKYGLPLNLASGDRLYWLSTGAYTTSYSAVEFNGFPPLKAFYL" misc_feature complement(5060118..5061206) /gene="speC" /locus_tag="PA4519" /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase; Region: PLPDE_III_ODC; cd00622" /db_xref="CDD:143482" misc_feature complement(order(5060139..5060141,5060145..5060153, 5060160..5060162,5060166..5060168,5060262..5060264, 5060271..5060273,5060277..5060279,5060283..5060285, 5060343..5060345,5060349..5060351,5060373..5060378, 5060385..5060387,5060391..5060393,5060397..5060399, 5060427..5060432,5060436..5060438,5060802..5060810, 5060892..5060894,5060904..5060906,5060913..5060915, 5060952..5060954,5060967..5060969,5061033..5061038, 5061042..5061047,5061108..5061110,5061201..5061203)) /gene="speC" /locus_tag="PA4519" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143482" misc_feature complement(order(5060178..5060180,5060274..5060276, 5060346..5060348,5060478..5060489,5060598..5060603, 5060712..5060714,5060721..5060723,5060853..5060855, 5061051..5061053,5061108..5061110,5061114..5061116)) /gene="speC" /locus_tag="PA4519" /note="active site" /db_xref="CDD:143482" misc_feature complement(order(5060178..5060180,5060274..5060276, 5060478..5060489,5060598..5060603,5060712..5060714, 5060721..5060723,5060853..5060855,5061051..5061053, 5061108..5061110,5061114..5061116)) /gene="speC" /locus_tag="PA4519" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143482" misc_feature complement(order(5060274..5060276,5061108..5061110)) /gene="speC" /locus_tag="PA4519" /note="catalytic residues [active]" /db_xref="CDD:143482" misc_feature complement(order(5060151..5060153,5060178..5060180, 5060271..5060276,5060346..5060351)) /gene="speC" /locus_tag="PA4519" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:143482" gene complement(5061730..5063751) /locus_tag="PA4520" /db_xref="GeneID:881119" CDS complement(5061730..5063751) /locus_tag="PA4520" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_253210.1" /db_xref="GeneID:881119" /translation="MKTVLYPAIALMNRLSFGMKFGLISVLFFLPLLITSFYLVRDAY RQFSDTRIELQSLTLLGSGLQIRRGLESLNDLLQINAVIGQSGKAGDLEARIADVQKG LRGRLEALAPLSEDGAAVAEFEAQRDRLLNGLQAVEAEGSLQGKGARAEKLLGSAQVF IKLLIAQAGLSQDSQRQVRQLSELVGSITPEVTAAISKGRAIGAYSLGQGFLNSSSSA RLDELLLEFEKLHGEYGLKLQESLAGSPQLLEEAAQASRETLKSLGQLFEDRVIVAET LDTPWTQFYDQVSVAMDKTYQLDDAVLGYLDTQLQKRLQQVRTQMLLLVAALAVVFAA ILYLYGGFYVSTRATLKDLGRMMERVAGGDMTVSFQARSRDELGELGQSFNESVAKIH DLIERVSQTVGEVERQTLRVESVSAESNQAVAGQRSQIEQVATAMNQMAATAQEVARS AAMAVSSANSVNQETLSGRSLVESQVGSIQRLAGEIDQSVAAINRLASDSASISQVLD VIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAKRTQQSTAEIEQMILRL QGGVDAAVKAMGSSHHTADGTVNESAQVQQALENILGAVGMIVDQNQQIAAAAEQQTA VAHDIDQNIVEINQAGERTAEGASQTERASRELGAQVTQLKRLIGAFRV" misc_feature complement(5061733..5063313) /locus_tag="PA4520" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" protein_bind complement(5063829..5063841) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4520" /bound_moiety="AmrZ" gene complement(5063941..5064777) /locus_tag="PA4521" /db_xref="GeneID:881104" CDS complement(5063941..5064777) /locus_tag="PA4521" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253211.1" /db_xref="GeneID:881104" /translation="MTFLVLLLALALEKFSGWRRRIQRDGAWLAWLSLVEDLPSVSRR SWLGLLLAVVLPLLPLALLLTLLQSLAYGWLSLPLHLLVVVYSLGRGDVMADLGPFRD AWRREEAQAAFHVAERDLGILGGSESELIGRVHGHLLWQGYQSFFAVIFWYALLGPVA ALAYRLLALALEHARQPALREQAARVRHILDWLPVRALVLSFALVGNFLAVIRVLLHW LLAWDISAAALLGKAGRVASDVEAVELGAAGVASLDALWQLLVRAAVLWYAVFAFCAL FL" misc_feature complement(5063944..5064777) /locus_tag="PA4521" /note="Membrane protein AmpE required for beta-lactamase induction [Defense mechanisms]; Region: AmpE; COG3725" /db_xref="CDD:442939" gene complement(5064774..5065340) /gene="ampD" /locus_tag="PA4522" /db_xref="GeneID:881105" CDS complement(5064774..5065340) /gene="ampD" /locus_tag="PA4522" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="N-acetyl-anhydromuranmyl-L-alanine amidase" /protein_id="NP_253212.1" /db_xref="GeneID:881105" /translation="MHFDSVTGWVRGVRHCPSPNFNLRPQGDAVSLLVIHNISLPPGQ FGTGKVQAFFQNRLDPNEHPYFEEIRHLTVSAHFLIERDGAITQFVSCHDRAWHAGVS CFDGREACNDFSLGIELEGTDTEPYTDAQYTALAGLTRLLRAAFPGITPERIQGHCDI APERKTDPGEAFDWSRYRAGLTDSKEET" misc_feature complement(5064783..5065340) /gene="ampD" /locus_tag="PA4522" /note="1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD; Region: PRK11789" /db_xref="CDD:236984" misc_feature complement(order(5064840..5064842,5064846..5064848, 5064870..5064872,5065113..5065115,5065233..5065235)) /gene="ampD" /locus_tag="PA4522" /note="amidase catalytic site [active]" /db_xref="CDD:133475" misc_feature complement(order(5064840..5064842,5064870..5064872, 5065233..5065235)) /gene="ampD" /locus_tag="PA4522" /note="Zn binding residues [ion binding]; other site" /db_xref="CDD:133475" misc_feature complement(order(5064840..5064848,5064858..5064860, 5064870..5064872,5065008..5065010,5065047..5065052, 5065071..5065073,5065113..5065115,5065125..5065127, 5065227..5065232)) /gene="ampD" /locus_tag="PA4522" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133475" gene complement(5065491..5067746) /locus_tag="PA4523" /db_xref="GeneID:881147" CDS complement(5065491..5067746) /locus_tag="PA4523" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253213.1" /db_xref="GeneID:881147" /translation="MQNDANVVHLTRVASEPSPNAGAGRLPVILVQVRDKAALQLKQA LQALFDNADDTLFEMADRATSNLEQNAFFEAMRDLRLKRKSIERVYLQKVFEEFSALN QVQSGKSVPTLDTVSFDSLSLVQNEELEESVAVDAMVARVMSRDATALAHLSTRLNTL VGRKVDEKSNPLAPRPLTAAFLDACQGLGVEIKVKLIILKLFEKYVLAHCDQLYAEAN QILVAAGVLPELKSALPRRQPAVRPEAVRDAGTLQAQAALLDGGQQEVFGALQELLAQ VRDNPSFYRRETPENAAPISSNDLMRLLSHLQQHLPGPGAAEFDVRDGVDQLLQRVSH KSGRSRVVGQVDDDVINLVSMLFEFILDDRTLPDSLKALIGRMQIPMLKVALLDKTFF SRGSHPARRLLNEIASASLGWAEHNDARRDSLYQKIEQVVMRLLNDFVDDPAIFAELL EDFIAFTGDERRRSELLEQRTRDAEEGRAKAELARQDVEQVLNQRLLGKVLPEVVVRL LRDAWSKVMLLICLKHGKASAEWREALDTMDELIWSVGPHDDPLSRQQLLERVPGLLK ALREGLASAAFDPFSTGEFFSQLETLHVQGLQRDKRGEAAVADSPLLDEASLGTAAEK PRAPVMLRVVEEIVLTSPDAAPAPVESEVRLPDNDEALLRVDALRVGSWVEIQEDAEH KLRCKLAAVIRPTGRYIFVNRTGMKVLEKTRMGLAVEFRRQAVRLLDDALLFDRALES VIGNLRRLKGA" misc_feature complement(5065512..5067677) /locus_tag="PA4523" /note="Protein of unknown function (DUF1631); Region: DUF1631; pfam07793" /db_xref="CDD:429661" gene 5068032..5068880 /gene="nadC" /locus_tag="PA4524" /db_xref="GeneID:878422" CDS 5068032..5068880 /gene="nadC" /locus_tag="PA4524" /EC_number="2.4.2.19" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nicotinate-nucleotide pyrophosphorylase" /protein_id="NP_253214.1" /db_xref="GeneID:878422" /translation="MPNLTLADLQGEIQANVRTALAEDVGGGDLTAQLIDPQREAEAR VITREHATIAGRAWVDEVFRQVDPRVLVTWQVEDGQRVEPNQMLFQLKGPARALLTGE RSALNFLQLLSGTATRSQHYADLVAGTAVKLLDTRKTLPGLRLAQKYAVTCGGCHNHR IGLYDAFLIKENHIAACGGIDRAIAEARRIAPGKPVEVEVENLDELRQALEAGADIVM LDELSLDDMRTAVALTAGRAKLEASGGINEGTLRNIAETGVDYISIGTLTKDVRAVDL SMRLTL" misc_feature 5068068..5068874 /gene="nadC" /locus_tag="PA4524" /note="Nicotinate-nucleotide pyrophosphorylase [Coenzyme transport and metabolism]; Region: NadC; COG0157" /db_xref="CDD:439927" gene complement(5068932..5069007) /locus_tag="PA4524.1" /db_xref="GeneID:3240259" tRNA complement(5068932..5069007) /locus_tag="PA4524.1" /product="tRNA-Thr" /db_xref="GeneID:3240259" gene complement(5069082..5069531) /gene="pilA" /locus_tag="PA4525" /db_xref="GeneID:878423" CDS complement(5069082..5069531) /gene="pilA" /locus_tag="PA4525" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial protein PilA" /protein_id="NP_253215.1" /db_xref="GeneID:878423" /translation="MKAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVARSEGASALA TINPLKTTVEESLSRGIAGSKIKIGTTASTATETYVGVEPDANKLGVIAVAIEDSGAG DITFTFQTGTSSPKNATKVITLNRTADGVWACKSTQDPMFTPKGCDN" misc_feature complement(<5069367..5069531) /gene="pilA" /locus_tag="PA4525" /note="Type II secretory pathway, pseudopilin PulG [Cell motility, Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: PulG; COG2165" /db_xref="CDD:441768" misc_feature complement(5069091..5069429) /gene="pilA" /locus_tag="PA4525" /note="Pilin (bacterial filament); Region: Pilin; pfam00114" /db_xref="CDD:395064" gene 5069763..5071463 /gene="pilB" /locus_tag="PA4526" /db_xref="GeneID:879459" CDS 5069763..5071463 /gene="pilB" /locus_tag="PA4526" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein PilB" /protein_id="NP_253216.1" /db_xref="GeneID:879459" /translation="MNDSIQLSGLSRQLVQANLLDEKTAVQAQAQAQRNKLSLVTHLV QSKLVSGLALAELSAEQFGIAYCDLNSLDKESFPRDAISEKLVRQHRVIPLWRRGNKL FVGISDPANHQAINDVQFSTGLTTEAILVEDDKLGLAIDKLFESATDGLAGLDDVDLE GLDIGSADKSTQEDASAEADDAPVVRFVNKMLLDAIKGGSSDLHFEPYEKIYRVRFRT DGMLHEVAKPPIQLASRISARLKVMAGLDISERRKPQDGRIKMRVSKTKSIDFRVNTL PTLWGEKIVMRILDSSSAQMGIDALGYEEDQKELYLAALKQPQGMILVTGPTGSGKTV SLYTGLNILNTTDINISTAEDPVEINLEGINQVNVNPRQGMDFSQALRAFLRQDPDVI MVGEIRDLETAEIAIKAAQTGHMVMSTLHTNSAAETLTRLLNMGVPAFNLATSVNLII AQRLARKLCSHCKKEHEVPRETLLHEGFPEDKIGTFKLYSPVGCDHCKNGYKGRVGIY EVVKNTPALQRIIMEEGNSIEIAEQARKEGFNDLRTSGLLKAMQGITSLEEVNRVTKD " misc_feature 5069787..5071460 /gene="pilB" /locus_tag="PA4526" /note="type IV-A pilus assembly ATPase PilB; Region: type_IV_pilB; TIGR02538" /db_xref="CDD:274186" gene 5071567..5072691 /gene="pilC" /locus_tag="PA4527" /note="type 4 fimbrial biogenesis protein PilC" /pseudo /db_xref="GeneID:877860" gene 5072695..5073567 /gene="pilD" /locus_tag="PA4528" /db_xref="GeneID:877861" CDS 5072695..5073567 /gene="pilD" /locus_tag="PA4528" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 prepilin peptidase PilD" /protein_id="NP_253218.1" /db_xref="GeneID:877861" /translation="MPLLDYLASHPLAFVLCTILLGLLVGSFLNVVVHRLPKMMERNW KAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRPWENIPLVSYLALGGKCSSCKA AIGKRYPLVELATALLSGYVAWHFGFTWQAGAMLLLTWGLLAMSLIDADHQLLPDVLV LPLLWLGLIANHFGLFASLDDALFGAVFGYLSLWSVFWLFKLVTGKEGMGYGDFKLLA MLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESGTPIPFGPYLAIAGWIALLWG DQITRTYLQFAGFK" misc_feature 5072722..5073555 /gene="pilD" /locus_tag="PA4528" /note="Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase [Cell motility, Intracellular trafficking, secretion, and vesicular transport]; Region: PulO; COG1989" /db_xref="CDD:441592" gene 5073564..5074175 /gene="coaE" /locus_tag="PA4529" /db_xref="GeneID:878572" CDS 5073564..5074175 /gene="coaE" /locus_tag="PA4529" /EC_number="2.7.1.24" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="dephospho-CoA kinase" /protein_id="NP_253219.1" /db_xref="GeneID:878572" /translation="MTQPWILGLTGGIGSGKSAAAEHFISLGVHLVDADHAARWVVEP GRPALAKIVERFGDGILLPDGQLDRAALRERIFQAPEERRWLEQLLHPLIGAEIVQYL ARAESPYAILVSPLLVESGQRQMTHRVLVVDTPEHLQLQRTMLRDKVSEEQVRSILQA QARRDERLKHADDVLVNDGDLSHLQREVERLHAFYLTLRGGRA" misc_feature 5073573..5074148 /gene="coaE" /locus_tag="PA4529" /note="Dephospho-CoA kinase [Coenzyme transport and metabolism]; Region: CoaE; COG0237" /db_xref="CDD:440007" gene 5074172..5074372 /locus_tag="PA4530" /db_xref="GeneID:878573" CDS 5074172..5074372 /locus_tag="PA4530" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="zinc-binding protein" /protein_id="NP_253220.1" /db_xref="GeneID:878573" /translation="MSQPLTVECPTCGAPVEWKSDNKYRPFCSDRCKLIDLGAWAAEE HAIPGDTLEDDIFSADLPPREH" misc_feature 5074172..5074351 /locus_tag="PA4530" /note="DNA gyrase inhibitor YacG; Region: PRK00418" /db_xref="CDD:234754" gene complement(5074409..5074618) /locus_tag="PA4531" /db_xref="GeneID:878565" CDS complement(5074409..5074618) /locus_tag="PA4531" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253221.1" /db_xref="GeneID:878565" /translation="MGVHEWAREGLRELLSKSDEADRAMRLRALLSAIVELNRAERDA GDLASELQFLAENLDDQRDYAFMRP" gene complement(5074724..5075413) /locus_tag="PA4532" /db_xref="GeneID:878566" CDS complement(5074724..5075413) /locus_tag="PA4532" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253222.1" /db_xref="GeneID:878566" /translation="MIAAELLSAESLELGWAIYAPVLLLAAWRAPWVELVSDTRRQHL VFGTMLGLFLLWLVRRDFESGLSFHFIGMTAVTLLLDWPLAIVVGLVAQLGLCLLGRQ DWLAIGVNGVLLVAIPALIAELAALFVEKRQPRNLFVYIFCCGFFPAALTAVVVLLLG LGVVWIDGLFPMPPWLEDFAGYLWLIMFPEAFINGTVITGLVVYYPEWLETFNRTRYL QAPWKDEERKP" misc_feature complement(5074754..5075410) /locus_tag="PA4532" /note="Uncharacterized membrane protein [Function unknown]; Region: COG3235" /db_xref="CDD:442467" gene complement(5075410..5075880) /locus_tag="PA4533" /db_xref="GeneID:877952" CDS complement(5075410..5075880) /locus_tag="PA4533" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253223.1" /db_xref="GeneID:877952" /translation="MKRLHWVLLAMLLPGLALAVEKGSTLEPWTLQDQFEKAHSLDDS TRVLLVARDMDGSKLVKAALAERPKGYLEARHALFLADISRMPALISRLFAVPAMRDY SYPVLLDRDAAIASRYASDEGKVLWVRLEQRRVLETRQLDSPVALRIALEQLQP" gene complement(5075877..5076302) /locus_tag="PA4534" /db_xref="GeneID:877953" CDS complement(5075877..5076302) /locus_tag="PA4534" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253224.1" /db_xref="GeneID:877953" /translation="MQLRSVIAADHPALFALWSRTPGIRLRAEDAYPFFLAYLQRNPG LSLLVETEGEVIACLMAGHDGRRGYLQHLVVDPGYRGLGLARRMLDEVLARLAREGIG KSHVFVLDAAEEAQAFWRAQSDWERRKDIQVFSTREGHA" misc_feature complement(5075940..5076302) /locus_tag="PA4534" /note="putative acetyltransferase; Provisional; Region: PRK03624" /db_xref="CDD:235142" gene 5076435..5077064 /locus_tag="PA4535" /db_xref="GeneID:877929" CDS 5076435..5077064 /locus_tag="PA4535" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253225.1" /db_xref="GeneID:877929" /translation="MNEADYLRLLTRQAEQANDFLSNARKWDRERWVCQRFLEALNVP YRQEDFAAPGEQPPDVLFKGAGFEVFFVLDEGRRLNEEWREELTRRRQAVSLRQLIRR EERPQRIAAAELQARLAPTLRKKAHNYSERGIDHGELDLLAFVNLKRAVPDFNTPFPP PTEYLRQGWRSLSMVGPTFARVLFAHSGAPEFLRANLGRSILFDAGVGL" misc_feature 5076438..5077061 /locus_tag="PA4535" /note="Putative endonuclease, protein of unknown function (DUF1780); Region: DUF1780; pfam08682" /db_xref="CDD:430150" gene 5077061..5077510 /locus_tag="PA4536" /db_xref="GeneID:877930" CDS 5077061..5077510 /locus_tag="PA4536" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253226.1" /db_xref="GeneID:877930" /translation="MSEGRVKWIGVRSGSRAPIQELEAVEARRGLGLTGDHPHPPRQV TLVQWEHIEALGTLLGRPLLPNEMRRNIAVAGINLLSLKDRRFRLGGALLETTGWYQP CGRLEKHIDHRTLKSVREQGGITARVIGSGVIRLDDPLVIEPPVCLE" misc_feature 5077070..5077495 /locus_tag="PA4536" /note="N-hydroxylaminopurine reductase YiiM, contains MOSC domain [Nucleotide transport and metabolism, Defense mechanisms]; Region: YiiM; COG2258" /db_xref="CDD:441859" gene 5077536..5077706 /locus_tag="PA4537" /db_xref="GeneID:878459" CDS 5077536..5077706 /locus_tag="PA4537" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253227.1" /db_xref="GeneID:878459" /translation="MSSRLSPEDQQKVEQYLASPLHQVERAPFRPWFLMFVLLAVVIG LGLLSRLLSYLA" misc_feature 5077539..>5077664 /locus_tag="PA4537" /note="Protein of unknown function (DUF3094); Region: DUF3094; pfam11293" /db_xref="CDD:431790" gene 5077770..5079077 /gene="ndh" /locus_tag="PA4538" /db_xref="GeneID:878460" CDS 5077770..5079077 /gene="ndh" /locus_tag="PA4538" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase" /protein_id="NP_253228.1" /db_xref="GeneID:878460" /translation="MSHRIVIVGGGAGGLELATRLGRTLGKRGKAQVTLVDANLTHIW KPLLHEVAAGSLNSSEDELNYVAQAKWNHFEFQLGRMQGLDRAGKRVRLAALVDENGV ELVPERDIAYDTLVIAVGSTTNDFGTEGAAEHCIFLDTRAQAERFHRQLLGQYLRAHT GHDANNNAVSIAIIGAGATGVELAAELHHAAQMLAAYGLDRIRPEDLHISLVEAGPRV LPALPERISQPVHQTLSKLGVRVMTGSAVSKVDADGLWTGDGEFVPATLKVWAAGIRA PAFLKELDGLESNRINQLVVRPTLQTTRDDDIFAFGDCAACPQPAQPGEQPRNVPPRA QAAHQQASLLVKSLRARLEGKPLGEYHYRDYGSLISLSRFSAVGNLMGNLMGSVMLEG WLARMFYVSLYRMHQMALYGPLRTAMLMLSGRLRSTEPRLKLH" misc_feature 5077776..5079023 /gene="ndh" /locus_tag="PA4538" /note="NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; Region: Ndh; COG1252" /db_xref="CDD:440864" protein_bind 5079089..5079101 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(5079117..5080208) /locus_tag="PA4539" /db_xref="GeneID:877787" CDS complement(5079117..5080208) /locus_tag="PA4539" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253229.1" /db_xref="GeneID:877787" /translation="MSFGSFSWRSPMTGTKPTTPVARYFHQEAQRRGYVLDAAQGNAI LHLDRLAERLRRGPSLFRQAPRSLYLWGPVGRGKSWLMDGFFRSADLQGLRRTHFHAF FRRLHDGMFRRQGRPDALGGALDELLGDCRLLCFDEFHVHDIGDAMLITRLFRELFGR KITLVCTSNYAPRQLLPNPLYHERFLPAIRLIETRMEVLEVAGARDYRTISPRQEIAS GYASGGYCWPASCACLDELGLSAPEPSQRVTLQSGARTLQARAVCGDLVWFAFADLCE APTAVMDYLALGERFSTWVLEGVPPMARCSVAAQQRFINLVDVLYDNDRRFFLSAEKA LPDLVEGSDLPADMQRTASRLAQLRQLRC" misc_feature complement(5079129..5080157) /locus_tag="PA4539" /note="AFG1-like ATPase; Region: AFG1_ATPase; pfam03969" /db_xref="CDD:397872" gene 5080757..5082394 /locus_tag="PA4540" /db_xref="GeneID:877788" CDS 5080757..5082394 /locus_tag="PA4540" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253230.1" /db_xref="GeneID:877788" /translation="MGMAMLSSCLANAAPDAGQALRDVESRRLNLPAPVELDAERPSP EDGVSRAAEEGGPTVLVKRFQLSGNRQFDDRRLLALLHDLPGQELNLSQLHAAAARIG DFYQEKGYVLARAFLPAQEIQDGTVRIEVLEGRYGRIELHNTSRTLDRVLLRPLSALE RDTAVQGSELERALLLLSDIPGLQAKGTLLPGQAQGTTDLRVEARPGPLVGGRLEADN YGGRYMGEYRLGTTLDFNSPLRLGDQARLSLLGSDRHQRYYRAAYQLPLGSRGTRIGL AHAETTYRLVRDFSRLDAHGRAITDSLFVSQPLLRSRSLSLSTQLQYENKRLRDDQER TGRHSRKEIRLWTASISGNAQDRLFGGGQSGFSLAYAHGQLAIDSGEERLLDRYTIGT AGSFDKIMLNAVRLQHLGDRLQLFAQLNAQWSGGNLDSAEQFDMGGPYGVRAFPLGSY KGYGDEGWQASAELRYSLAPGWQLSSFVDQGAVKFLKHPNTTEGNRNRMAAVGSGATW YGTDHQVSLTAAWPLSQENNIEPERTPRLWLQATRYF" misc_feature 5080763..5082391 /locus_tag="PA4540" /note="Hemolysin activation/secretion protein [Intracellular trafficking, secretion, and vesicular transport]; Region: FhaC; COG2831" /db_xref="CDD:442079" gene 5082443..5086696 /locus_tag="PA4541" /db_xref="GeneID:878626" CDS 5082443..5086696 /locus_tag="PA4541" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253231.1" /db_xref="GeneID:878626" /translation="MNKSYTLVWNQATGCWNVASEGTRRRSKSGRGKALVVAGASLLG LFCQAPAFALPSGATVVSGDAGFQTSTDGRHMVIDQQSHKLITNWNEFSVRADERVSF HQPGQDAVALNRVIGRNGSDIQGRIDANGKVFLVNPNGVVFGKSAQVNVGGLVASTLD LADRDFLAGNYQFSGDSGATVSNAGSLQASEGGSIALLGARVSNDGLIQAQLGDVALG AGQGINLNFDGDGLLNLQVDKGSVDALAHNGGLIRADGGQVLMSARSADSLLKTVVNN QGTLEARTLRSAEGRIVLDGGEQGTVRVAGKQDASAIGGGNGGLVLNQGANVEIQRTA QVDTHADQGATGTWRILSHEVSVAAVGQANAAGDGSGQVHVAQGPAGANASDSNGVTI VQQQPAVDLAAGANGTSAVQSQSGANIGSGANGISVVQSQNSPNIGSGANGISVVQSQ NGANIGAGASGISVVQSQNSPNIGSGVNGVTVVQSQNGANIGSGASGITVVQSQNGAN IGSGASGISVVQSQSGPSIGSGVNGVTIVQSQSGANIGPGVSGIDVVQTQTLPNLSPG ANGSSIVQVQTLPDIAADAGNVHVVQVQTGGNKVFGNSATNVRSRTVQARSNENVGSG LANPSSAGKGSTLHADTLARNLSTSNVEVVATRGNAHVGAPLSWDSGNGLTLTAERGD LRINGALTAQGENASLTLNAGQRPLRIDDSLSLTGQGARVEFNSDKGYALAEGTRITL SGKNAGFRANGRDYSVIQDLQQLRGIDRDLGGSYVLGNRIAGGNSSFLSIGNASAFGG TFDGLGNTIDNLAVYGTGAYSGLFSVNRGTLRNLNLERISADGAQATHYNVQVGSLAA VNLGRIDNVNASDIRIAAASKLNSLGGLVALNLGSIDNASASGTLVGNRHTYALGGLA AENISTARGVASISNSRADFAISGQLKDHASHYGAGGLVGRNRGGLIRSSGSQGTLSL SGHGMNLGGLVGYSSAGGLADVSASVDVSGNGQRGLYGGLIGLNVNSGIAHATASGKV RGTDAEALGGLIGRNLNAAINNASAHGDVSLQAGRYLGGLIGHNQAGNLANVSTSGNL SGGSLLQAGGLIGLNANASLVNASAKGNVATRGAEAVGGLLGENLYGSVINGSASGEV TDGSGKTLGGLIGSNLGGNHSNLKASGWVNAGANSDVGGLIGHNRGGNHSTLAASGNV TGGKGSRVGGLVGYNDAASLTNVSASGNVSASGSRAIGGLIGSDLRGSLMLASSHGIV NDKTSHNLGGLVGRGENTSIRSAKASGAVSGGAGIRAGGLVGSLEGWQALILGASAGG DVTAGYDSYIGGLVGFSTATISGASASGKVGGSGLLGGLVAWNQGNVMGSSASGRLEP QIPNQIHGGLIGINFGWQSWNSVYGAAATVPMIGRHYNL" misc_feature 5082443..5082589 /locus_tag="PA4541" /note="Extended Signal Peptide of Type V secretion system; Region: ESPR; pfam13018" /db_xref="CDD:463773" misc_feature 5082593..5083333 /locus_tag="PA4541" /note="TPS secretion domain; Region: TPS; pfam05860" /db_xref="CDD:461762" misc_feature 5082758..5086564 /locus_tag="PA4541" /note="Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport]; Region: FhaB; COG3210" /db_xref="CDD:442443" gene complement(5086925..5087000) /locus_tag="PA4541.1" /db_xref="GeneID:3240260" tRNA complement(5086925..5087000) /locus_tag="PA4541.1" /product="tRNA-Lys" /db_xref="GeneID:3240260" gene complement(5087011..5087087) /locus_tag="PA4541.2" /db_xref="GeneID:3240269" tRNA complement(5087011..5087087) /locus_tag="PA4541.2" /product="tRNA-Pro" /db_xref="GeneID:3240269" gene complement(5087097..5087172) /locus_tag="PA4541.3" /db_xref="GeneID:3240265" tRNA complement(5087097..5087172) /locus_tag="PA4541.3" /product="tRNA-Asn" /db_xref="GeneID:3240265" gene complement(5087408..5089972) /gene="clpB" /locus_tag="PA4542" /db_xref="GeneID:879457" CDS complement(5087408..5089972) /gene="clpB" /locus_tag="PA4542" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="chaperone protein ClpB" /protein_id="NP_253232.1" /db_xref="GeneID:879457" /translation="MRIDRLTSKLQLALSDAQSLAVGHDHPAIEPVHLLSALLEQQGG SIKPLLMQVGFDIAALRSGLNKELDALPKIQSPTGDVNLSQDLARLLNQADRLAQQKG DQFISSELVLLAAMDENTRLGKLLLGQGVSRKALENAVANLRGGEAVNDPNVEESRQA LDKYTVDMTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG LAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERLKAVLNELGKQEGRVILF IDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ KVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHRYITDRQLPDKAID LIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRKRLAKLEEDIVK LEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMARIQYQTIPD LERSLQMVDQHGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEQEL HRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFD TEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSVVLLDEVEKA HPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQELAGDREAQRAAVM DAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLELSQEAL DKLIAVGFDPVYGARPLKRAIQRWIENPLAQLILAGKFAPGASISAKVEGDEIVFA" misc_feature complement(5087417..5089957) /gene="clpB" /locus_tag="PA4542" /note="ATP-dependent chaperone ClpB; Region: chaperone_ClpB; TIGR03346" /db_xref="CDD:274529" gene complement(5090128..5090856) /locus_tag="PA4543" /db_xref="GeneID:878617" CDS complement(5090128..5090856) /locus_tag="PA4543" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253233.1" /db_xref="GeneID:878617" /translation="MNAWLTPDWPAPARVRACVTTRSGGVSQAPFDSLNLGAHVDDDP RAVEENRRRLTERLECRPSWLDQVHGVTVVEADPSRVLRADASWSAMPGVACTIMTAD CLPALFCDRSGTRVAAAHAGWRGLAAGVLEATVDSLGVPGDELLVWLGPAIGPRAFEV GGEVRDAFVAAHAEARSAFVPSANPGRFMADIYRLARIRLGAHGVTAVHGGGFCTFSD TARFYSYRRSSRTGRFASLVWLQD" misc_feature complement(5090137..5090838) /locus_tag="PA4543" /note="Copper oxidase (laccase) domain [Inorganic ion transport and metabolism]; Region: YfiH; COG1496" /db_xref="CDD:441105" gene complement(5090853..5091815) /gene="rluD" /locus_tag="PA4544" /db_xref="GeneID:877896" CDS complement(5090853..5091815) /gene="rluD" /locus_tag="PA4544" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="pseudouridine synthase" /protein_id="NP_253234.1" /db_xref="GeneID:877896" /translation="MSDMIQRAAEVPFELGGQRLDQIAAQLFPEHSRSRLAGWIKDGR LTVDGAVLRPRDIVHSGAQLVLEAEQEAQGEWLAQDIELEIVYEDEHILVIDKPAGLV VHPAAGHQDGTLLNALLYHVPDIANVPRAGIVHRLDKDTTGLMVVAKTLEAHTKLVAQ LQARSVSRIYEAIVIGVITSGGTIDAPIGRHGVQRQKMAVVDAGKVAVSHYRVLERFR AHTHTRVKLETGRTHQIRVHMSHIGYPLVGDPVYGGRFRIPPVASQTLVQTLREFPRQ ALHARFLELDHPATGVRMKWESPLPEDFLWLLSLLRQDREAFVG" misc_feature complement(5090862..5091815) /gene="rluD" /locus_tag="PA4544" /note="23S rRNA pseudouridine(1911/1915/1917) synthase RluD; Region: rluD; PRK11180" /db_xref="CDD:183020" gene 5091961..5092986 /gene="comL" /locus_tag="PA4545" /db_xref="GeneID:877897" CDS 5091961..5092986 /gene="comL" /locus_tag="PA4545" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="competence protein ComL" /protein_id="NP_253235.1" /db_xref="GeneID:877897" /translation="MQVKHLLLIAILALTAACSSNKETVDENLSESQLYQQAQDDLNN KSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNMEPEAARAAAERFIRLHPQHP NVDYAYYLKGLSSFDQDRGLLARFLPLDMTKRDPGAARDSFNEFAQLTSRFPNSRYAP DAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVENFQETPAVGDGLAIMV EAYRRLGLDDLASTSLETLKLNYPDNASLKDGEFVARESEADTRSWLAKATLGLIEGG EPPPHMETQAAKDVIKQYEDAEREIPAELKPENQDHSADDEKPESDDDEDSGRSWWSY MTFGLFD" misc_feature 5092045..5092683 /gene="comL" /locus_tag="PA4545" /note="BamD lipoprotein, a component of the beta-barrel assembly machinery; Region: BamD; cd15830" /db_xref="CDD:276939" misc_feature 5092051..5092137 /gene="comL" /locus_tag="PA4545" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276939" misc_feature order(5092054..5092056,5092063..5092065,5092087..5092095, 5092099..5092101,5092153..5092158,5092165..5092167, 5092174..5092179,5092186..5092188,5092195..5092200, 5092267..5092269,5092276..5092278,5092285..5092287, 5092297..5092299,5092378..5092380,5092387..5092389, 5092411..5092413,5092429..5092431,5092438..5092443, 5092447..5092464,5092468..5092470,5092477..5092479, 5092561..5092563,5092567..5092575,5092591..5092593, 5092654..5092656,5092663..5092668,5092675..5092680) /gene="comL" /locus_tag="PA4545" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:276939" misc_feature 5092156..5092251 /gene="comL" /locus_tag="PA4545" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276939" misc_feature 5092267..5092419 /gene="comL" /locus_tag="PA4545" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276939" misc_feature 5092456..5092575 /gene="comL" /locus_tag="PA4545" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276939" misc_feature 5092588..5092680 /gene="comL" /locus_tag="PA4545" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276939" gene 5093378..5094970 /gene="pilS" /locus_tag="PA4546" /db_xref="GeneID:877621" CDS 5093378..5094970 /gene="pilS" /locus_tag="PA4546" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component sensor PilS" /protein_id="NP_253236.1" /db_xref="GeneID:877621" /translation="MRAERLRLSEEQGQRILRLYHLYRLTIGLVLVLLISSELEDQVL KLVHPELFHVGSWCYLVFNILVALFLPPSRQLLPIFILALTDVLMLCGLFYAGGGVPS GIGSLLVVAVAIANILLRGRIGLVIAAAASLGLLYLTFFLSLSSPDATNHYVQAGGLG TLCFAAALVIQALVRRQEQTETLAEERAETVANLEELNALILQRMRTGILVVDSRQAI LLANQAALGLLRQDDVQGASLGRHSPMLMHCMKQWRLNPSLRPPTLKVVPDGPTVQPS FISLNREDDQHVLIFLEDISQIAQQAQQMKLAGLGRLTAGIAHEIRNPLGAISHAAQL LQESEELDAPDRRLTQIIQDQSKRMNLVIENVLQLSRRRQAEPQQLDLKEWLQRFVDE YPGRLRNDSQLHLQLGAGDIQTRMDPHQLNQVLSNLVQNGLRYSAQAHGRGQVWLSLA RDPESDLPVLEVIDDGPGVPADKLNNLFEPFFTTESKGTGLGLYLSRELCESNQARID YRNREEGGGCFRITFAHPRKLS" misc_feature 5093576..>5093929 /gene="pilS" /locus_tag="PA4546" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" misc_feature 5093915..5094946 /gene="pilS" /locus_tag="PA4546" /note="Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms]; Region: NtrY; COG5000" /db_xref="CDD:444024" gene 5094985..5096322 /gene="pilR" /locus_tag="PA4547" /db_xref="GeneID:877622" CDS 5094985..5096322 /gene="pilR" /locus_tag="PA4547" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component response regulator PilR" /protein_id="NP_253237.1" /db_xref="GeneID:877622" /translation="MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLA REPFDLCLTDMRLPDGSGLDLVQYIQQRHPQTPVAMITAYGSLDTAIQALKAGAFDFL TKPVDLGRLRELVATALRLRNPEAEEAPVDNRLLGESPPMRALRNQIGKLARSQAPVY ISGESGSGKELVARLIHEQGPRIERPFVPVNCGAIPSELMESEFFGHKKGSFTGAIED KQGLFQAASGGTLFLDEVADLPMAMQVKLLRAIQEKAVRAVGGQQEVAVDVRILCATH KDLAAEVGAGRFRQDLYYRLNVIELRVPPLRERREDIPLLAERILKRLAGDTGLPAAR LTGDAQEKLKNYRFPGNVRELENMLERAYTLCEDDQIQPHDLRLADAPGASQEGAASL SEIDNLEDYLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID" misc_feature 5094988..5096313 /gene="pilR" /locus_tag="PA4547" /note="DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]; Region: AtoC; COG2204" /db_xref="CDD:441806" gene complement(5096368..5097462) /locus_tag="PA4548" /db_xref="GeneID:878196" CDS complement(5096368..5097462) /locus_tag="PA4548" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="D-amino acid oxidase" /protein_id="NP_253238.1" /db_xref="GeneID:878196" /translation="MSERVVVVGAGVIGLLTARELALAGLRVTLVERGESGREASWAG GGIVSPLYPWRYSPAVTALAHWSQDFYPALGQRLLDETGLDPEVHTVGLYWLDLDDQT EALQWARKHTRPLKEVPIEEAYAAVPGLGAGFQRAVYMSGVANVRNPRLARSLRASLQ QFANLELHEQTEVRGWLRDGDRVVGVATSRGEIRGDKVLLAAGAWSGELLKPLGLELP VVPVKGQMILYKCAADFLPRMVLAKGRYAIPRRDGHILIGSTLEHSGFDKTPTDEAQE SLRASAAELLPELADMQPVAHWAGLRPGSPEGIPYIGPVPGFDGLWLNTGHYRNGLVL APASCRLLADLMSGREPIIDPAPYAPAGRL" misc_feature complement(5096380..5097420) /locus_tag="PA4548" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" gene 5097597..5098106 /gene="fimT" /locus_tag="PA4549" /db_xref="GeneID:878197" CDS 5097597..5098106 /gene="fimT" /locus_tag="PA4549" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein FimT" /protein_id="NP_253239.1" /db_xref="GeneID:878197" /translation="MVERSQRALTLTELLFALVLLGILGSLALPGMAAWLDGNRERSV LHELSASIQLGRTHAVAYQRPVTLCPSTDGRHCGSDWGEGWLLAEDGGERLLVGRALA KKERLLWNRSNRLRFLPSGQLNIHNGRFLLCGRHTVAWQLILNRQGRLRTASARENRE KRELCSTSG" misc_feature 5097606..5097809 /gene="fimT" /locus_tag="PA4549" /note="Type IV pilus assembly protein FimT [Cell motility, Extracellular structures]; Region: FimT; COG4970" /db_xref="CDD:443996" misc_feature 5097735..5098040 /gene="fimT" /locus_tag="PA4549" /note="Type II transport protein GspH; Region: GspH; pfam12019" /db_xref="CDD:463433" protein_bind 5098127..5098135 /experiment="DNAse footprinting [PMID: 18178737]" /experiment="EMSA [PMID: 18178737]" /experiment="qRT-PCR [RNA] [PMID: 18178737]" /note="'Transcription factor binding site for NP_253948.; Evidence of regulation for: PA4551, PA4550, PA4553, PA4552, PA4555, PA4554, PA4556'" /bound_moiety="AlgR" protein_bind 5098168..5098176 /experiment="DNAse footprinting [PMID: 18178737]" /experiment="EMSA [PMID: 18178737]" /experiment="qRT-PCR [RNA] [PMID: 18178737]" /note="'Transcription factor binding site for NP_253948.; Evidence of regulation for: PA4551, PA4550, PA4553, PA4552, PA4555, PA4554, PA4556'" /bound_moiety="AlgR" gene 5098212..5098718 /gene="fimU" /locus_tag="PA4550" /db_xref="GeneID:879606" CDS 5098212..5098718 /gene="fimU" /locus_tag="PA4550" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein FimU" /protein_id="NP_253240.1" /db_xref="GeneID:879606" /translation="MSYRSNSTGFTLIELLIIVVLLAIMASFAIPNFKQLTERNELQS AAEELNAMLQYARSEAVSQRRAISIQALKDKDWGKGLSIGVLASGSIAAPLRKHDGFR AATLTAKEKSAVEHLTFTANGTLVPPTERTFAICQNGKTDGGRVLSISQAGRIQLEPS SKAPQSCY" misc_feature 5098215..5098421 /gene="fimU" /locus_tag="PA4550" /note="Type IV pilus assembly protein FimT [Cell motility, Extracellular structures]; Region: FimT; COG4970" /db_xref="CDD:443996" misc_feature 5098344..5098670 /gene="fimU" /locus_tag="PA4550" /note="Type II transport protein GspH; Region: GspH; pfam12019" /db_xref="CDD:463433" gene 5098709..5099266 /gene="pilV" /locus_tag="PA4551" /db_xref="GeneID:879607" CDS 5098709..5099266 /gene="pilV" /locus_tag="PA4551" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein PilV" /protein_id="NP_253241.1" /db_xref="GeneID:879607" /translation="MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQY TADSVERNKAAMLGSNLLESMRASPKALYDVKDQMATQSDFFKAKGSAFPTAPSSCTP LPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK QGACVNAADSSADTSLCYYTLRVEP" misc_feature 5098742..5099182 /gene="pilV" /locus_tag="PA4551" /note="type IV pilus modification protein PilV; Region: type_IV_pilV; TIGR02523" /db_xref="CDD:131575" gene 5099263..5100087 /gene="pilW" /locus_tag="PA4552" /db_xref="GeneID:879456" CDS 5099263..5100087 /gene="pilW" /locus_tag="PA4552" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein PilW" /protein_id="NP_253242.1" /db_xref="GeneID:879456" /translation="MSMNNRSRRQSGLSMIELLVALAISSFLILGITQIYLDNKRNYL FQQGQAGNQENGRFAMMFLDQQLAKVGFRRRADDPNEFAFPAQQKTAYCEAFKAGSTL VPAVVKAGQSGFCYRYQPAPGEAYDCEGNSITTPSDPFATAQAITARVLFVPATADVP GSLACSAQTIKEKGQEIVSGLVDFKLEYGVGPTMAGKREVESFVEQANIADRPVRALR YSALMASDKNLRQGDSKTLDDWITLYPSSKTSLQGNDKDRLYQIAKGSQTLRNLVP" misc_feature 5099281..>5099499 /gene="pilW" /locus_tag="PA4552" /note="Type IV pilus assembly protein PilW [Cell motility, Extracellular structures]; Region: PilW; COG4966" /db_xref="CDD:443992" gene 5100084..5100671 /gene="pilX" /locus_tag="PA4553" /db_xref="GeneID:877858" CDS 5100084..5100671 /gene="pilX" /locus_tag="PA4553" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein PilX" /protein_id="NP_253243.1" /db_xref="GeneID:877858" /translation="MNNFPAQQRGATLVIALAILVIVTLLAVSSMREVVLESRITGNV IEQTRLQNAAESGLREGERRFVNTLRPPEPGTGCTADNVARPCLLDLAALNLKLADTH QNPVGVLKGIANTWMSYRGSDISSATTAGTLYSVQWNNLPIPSGGQVNEAESPEYGNL MRGIGTFYYETNSVARNQTNSETVLQTVLARLYTN" misc_feature 5100096..5100662 /gene="pilX" /locus_tag="PA4553" /note="Type IV pilus assembly protein PilX [Cell motility, Extracellular structures]; Region: PilX; COG4726" /db_xref="CDD:443761" gene 5100683..5104168 /gene="pilY1" /locus_tag="PA4554" /db_xref="GeneID:877859" CDS 5100683..5104168 /gene="pilY1" /locus_tag="PA4554" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein PilY1" /protein_id="NP_253244.1" /db_xref="GeneID:877859" /translation="MKSVLHQIGKTSLAAALSGAVLLSAQTTHAAALSVSQQPLMLIQ GVAPNMLVTLDDSGSMAFAYAPDSISGYGNYTFFASNSFNPMYFDPNTQYKLPKKLTL VNGQVQIQDYPAPNFSSAWRNGFTRSGSINLSNSYKVTIEYGRGYDKESTIKADAAYY YDFTGSSSCNRTNQACYTRRYVSTEQRQNFANWYSFYRTRALATQTAANLAFYSLPEN ARVSWQLLNDSNCNQMGSGSSSGNCFSNYLRDFTGQHRVNFFNWLEKLSVNGGTPLRQ AMTRAGEFLKKTGVNGPYAYRPGTQTAPEYSCRGSYHILMTDGLWNNDSANVGNADST ARNLPDGKSYSSQTPYRDGTFDTLADQAFHYWATDARPDIDDNIKPYIPYPDQANPSA EYWNPRNDPATWQHMVTYTLGLGLTTSLTSPRWEGSTFSGGYNDIVAGNLSWPRASNN DSNNVYDLWHAAVNSRGEFFSADSPDQLVAAFQDILNRISGKDLPASRPAISSSLQED DTGDKLTRFAYQTSFASDKNWAGDLTRYSLTTQDKATVQTKLWSAQSILDAMPNGGAG RKIMMAGSGTSGLKEFTWGSLSADQQRQLNRDPDRNDVADTKGQDRVAFLRGDRRKEN SDNFRTRNSILGDIINSSPATVGKAQYLTYLAQPIEPSGNYSTFAEAQKTRAPRVYVG ANDGMLHGFDTDGNETFAFIPSAVFEKLHKLTARGYQGGAHQFYVDGSPVVADAFFGG AWHTVLIGSLRAGGKGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGK WAVVTGNGYSSLNDKAALLIIDLETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVA DYAYAGDLQGNLWRFDLIAGKVNQDDPFSRANDGPAVASSFRVSFGGQPLYSAVDSAG AAQAITAAPSLVRHPTRKGYIVIFGTGKYFENADARADTSRAQTLYGIWDQQTKGEAA GSTPRLTRGNLQQQTLDLQADSTFASTARTIRIASQNPVNWLNNDGSTKQSGWYLDFM VNGTLKGEMLIEDMIAIGQVVLLQTITPNDDPCADGASNWTYGLDPYTGGRTSFTVFD LARQGVVDSKSDYSYNKQNVAVSGTEQKGLGGLTLSTNEQGNPEVCSSGECLTVNPGP NTRGRQNWRPIEGKN" misc_feature 5101514..5104147 /gene="pilY1" /locus_tag="PA4554" /note="Type IV pilus assembly protein, tip-associated adhesin PilY1 [Cell motility, Extracellular structures]; Region: PilY1; COG3419" /db_xref="CDD:442645" gene 5104170..5104517 /gene="pilY2" /locus_tag="PA4555" /db_xref="GeneID:878450" CDS 5104170..5104517 /gene="pilY2" /locus_tag="PA4555" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein PilY2" /protein_id="NP_253245.1" /db_xref="GeneID:878450" /translation="MKVLPMLLALAVPGLCWAEDPQTFEGAGVVFEVQVEKNLVDIDH RLYRLPNSTVRNGMPSLFQVKPGSVVSYSGTVSQPWSTITDIYIHKQMSEQELAEMIE KEQPRQDGEEQPR" misc_feature 5104170..5104484 /gene="pilY2" /locus_tag="PA4555" /note="Type 4 fimbrial biogenesis protein PilY2; Region: Fimbrial_PilY2; pfam14481" /db_xref="CDD:373090" gene 5104514..5104939 /gene="pilE" /locus_tag="PA4556" /db_xref="GeneID:878451" CDS 5104514..5104939 /gene="pilE" /locus_tag="PA4556" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein PilE" /protein_id="NP_253246.1" /db_xref="GeneID:878451" /translation="MRTRQKGFTLLEMVVVVAVIGILLGIAIPSYQNYVIRSNRTEGQ ALLSDAAARQERYYSQNPGVGYTKDVAKLGMSSANSPNNLYNLTIATPTSTTYTLTAT PINSQTRDKTCGKLTLNQLGERGAAGKTGNNSTVNDCWR" misc_feature 5104514..5104933 /gene="pilE" /locus_tag="PA4556" /note="Type IV pilus assembly protein PilE [Cell motility, Extracellular structures]; Region: PilE; COG4968" /db_xref="CDD:443994" gene complement(5104986..5105930) /gene="lytB" /locus_tag="PA4557" /db_xref="GeneID:879669" CDS complement(5104986..5105930) /gene="lytB" /locus_tag="PA4557" /EC_number="1.17.7.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="4-hydroxy-3-methylbut-2-enyl diphosphate reductase" /protein_id="NP_253247.1" /db_xref="GeneID:879669" /translation="MQIKLANPRGFCAGVDRAIEIVNRALDVFGPPIYVRHEVVHNKF VVDNLRQRGAIFVEELDQVPNNVIVIFSAHGVSQAVRKEAEGRGLKVFDATCPLVTKV HMEVVRYSRDGHECVLIGHEGHPEVEGTMGQYDASNGGAIYLVEDEADVAALEVRKPE ALHYVTQTTLSMDDTSKVIDALRAKFPQIQGPRKNDICYATQNRQDAVKELADQCDMV LVVGSPNSSNSNRLRELAERMGTPAYLIDGAEDMQRGWFDGVRRIGITAGASAPEVLV RGVIAQLREWGASEEQELEGREENITFSMPKELRVKAL" misc_feature complement(5105025..5105930) /gene="lytB" /locus_tag="PA4557" /note="4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed; Region: ispH; PRK01045" /db_xref="CDD:234893" misc_feature complement(order(5105337..5105339,5105643..5105645, 5105895..5105897)) /gene="lytB" /locus_tag="PA4557" /note="Fe-S cluster binding site [ion binding]; other site" /db_xref="CDD:260116" misc_feature complement(order(5105121..5105123,5105247..5105258, 5105424..5105429,5105553..5105555,5105559..5105561, 5105709..5105714,5105808..5105813,5105886..5105888)) /gene="lytB" /locus_tag="PA4557" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:260116" misc_feature complement(order(5105247..5105249,5105253..5105255, 5105553..5105555,5105559..5105561)) /gene="lytB" /locus_tag="PA4557" /note="catalytic site [active]" /db_xref="CDD:260116" gene complement(5106016..5106456) /locus_tag="PA4558" /db_xref="GeneID:877619" CDS complement(5106016..5106456) /locus_tag="PA4558" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="FkbP-type peptidyl-prolyl cis-trans isomerase" /protein_id="NP_253248.1" /db_xref="GeneID:877619" /translation="MAESTRIGQESRVTLHFALKLEDGNVVDSTFDKQPASFKVGDGN LLPGFEQALFGLKAGDKRTLSILPEQGFGQPNPQNVQIMPRDQFQDMELAEGLLVIFN DAAKTELPGVVKAFDEQQVTVDFNHPLAGKTLAFEVEIIDVQPA" misc_feature complement(5106028..5106438) /locus_tag="PA4558" /note="Peptidyl-prolyl cis-trans isomerase, FKBP type [Posttranslational modification, protein turnover, chaperones]; Region: SlpA; COG1047" /db_xref="CDD:440668" gene complement(5106449..5106958) /gene="lspA" /locus_tag="PA4559" /db_xref="GeneID:877620" CDS complement(5106449..5106958) /gene="lspA" /locus_tag="PA4559" /EC_number="3.4.23.36" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="lipoprotein signal peptidase" /protein_id="NP_253249.1" /db_xref="GeneID:877620" /translation="MPDVDRFGRLPWLWITVLVFVLDQVSKAFFQAELSMYQQIVVIP DLFSWTLAYNTGAAFSFLADSSGWQRWLFALIAIVVSASLVVWLKRLKKGETWLAIAL ALVLGGALGNLYDRMVLGHVVDFILVHWQNRWYFPAFNLADSAITVGAVMLALDMFRS KKSGEAAHG" misc_feature complement(5106464..5106931) /gene="lspA" /locus_tag="PA4559" /note="Lipoprotein signal peptidase [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport]; Region: LspA; COG0597" /db_xref="CDD:440362" gene complement(5106951..5109782) /gene="ileS" /locus_tag="PA4560" /db_xref="GeneID:878194" CDS complement(5106951..5109782) /gene="ileS" /locus_tag="PA4560" /EC_number="6.1.1.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="isoleucine--tRNA ligase" /protein_id="NP_253250.1" /db_xref="GeneID:878194" /translation="MTDYKATLNLPETAFPMKAGLPQREPETLKFWNDIGLYQKLRAI GGDRPKFVLHDGPPYANGSIHIGHAVNKILKDIIVRSKTLAGYDAPYVPGWDCHGLPI EHKVETTHGKNLPADKTRELCREYAAEQIEGQKADFIRLGVLGEWDNPYKTMNFANEA NEIRALAEMVKQDFVFKGLKPVNWCFDCGSALAEAEVEYADKKSPTIDVGFPVADADK LAAAFGLAALDKPAQIVIWTTTPWTIPANQALNVHPEIDYALVDAGDRYLVLAEALVE SCLARYQREGKVVATAKGEALELINFRHPFYERLSPVYLADYVALDAGTGIVHSSPAY GEDDFYTCKRYGMSNDDILSPVQSNGVYVDSLPFFGGQFIWKANPNVVAKLEEVGSLL AHETINHSYMHCWRHKTPLIYRATAQWFVGMDKQPRQGASLRERALEAITQTEFVPGW GQARLHGMIAGRPDWCISRQRNWGVPIPFFLHKASGELHPRTVELMEEVAQRVEKEGI EAWFKLDAAELLGEEAAQYEKINDTLDVWFDSGTTHWHVLRGSHRIGHASGPVADLYL EGSDQHRGWFHSSLLTGCAIDNHAPYRQLLTHGFTVDESGRKMSKSLGNTVVPQTVID TLGADILRLWVASTDYSGEIAVSQQILQRSADAYRRIRNTTRFLLSNLNGFDPATDLL PPQEMLALDRWAVDRALLLQREIEEAYREYRFWNVYSKVHNFCVQELGGFYLDIIKDR QYTTGANSVARRSCQTALFHIAEALVRWIAPILAFTAEEVWKFLPGERAESVMLATWY DGLNELPADVTLNRQYWEQVMAVKAAVNKELENQRAAKAVGGNLQAEVTLYAEDALQA QLAKLGNELRFVLITSTATLAPLSAAPADAVDSEVAGLKLKVVKSTHAKCGRCWHHRE DVGQHAAHPDLCGRCIENIEGSGEVRHYA" misc_feature complement(5106978..5109773) /gene="ileS" /locus_tag="PA4560" /note="Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: IleS; COG0060" /db_xref="CDD:439830" gene complement(5109806..5110744) /gene="ribF" /locus_tag="PA4561" /db_xref="GeneID:878195" CDS complement(5109806..5110744) /gene="ribF" /locus_tag="PA4561" /EC_number="2.7.1.26" /EC_number="2.7.7.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bifunctional riboflavin kinase/FMN adenylyltransferase" /protein_id="NP_253251.1" /db_xref="GeneID:878195" /translation="MQLLRGLHNLQPLAGGCVATIGNFDGVHLGHQAILARLRERSLE LGVPSCVVIFEPQPREFFSPDSAPVRLTRLREKLELLRGQGVDVVLCLAFNRRLRELS AAEFVRQVLVDGLAVRHLEVGDDFRFGCDRSGDFAFLVNASREQGFTVEAATTVELDG VRVSSTRVRQALAEGDLHLAERLLGRPFSLSGRVLHGQKLGRQLGSPTANIQLKRRKA PLNGVYLVSTLVDGQRCQGVANIGTRPSVNGDGRPHLEVHLLDFAGDLYGRHLQVTFH QKLRDEQRFASLEALKAAILADIAAARAYWLGQPLD" misc_feature complement(5109869..5110744) /gene="ribF" /locus_tag="PA4561" /note="FAD synthase [Coenzyme transport and metabolism]; Region: RibF; COG0196" /db_xref="CDD:439966" gene complement(5110841..5112379) /locus_tag="PA4562" /db_xref="GeneID:879604" CDS complement(5110841..5112379) /locus_tag="PA4562" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253252.1" /db_xref="GeneID:879604" /translation="MNLLKSLAAVSSITMLSRVLGFVRDTILARIFGAGLATDAFFVA FKLPNLLRRIFAEGAFSQAFVPILAEYKNQQGEEATRTFIAYVSGLLTLVLALVTALG ILAAPWVIWVTAPGFADTPEKFALTTDLLRVTFPYILLISLSSLAGAILNTWNRFSVP AFVPTLLNVAMIGFALFLTPYFDPPVMVLGWAVLAGGLLQLLYQLPHLRKIGMLVLPR LNLRDSGVWRVMKLMLPAILGVSVSQISLIINTIFASFLAAGSVSWMYYADRLMELPS GVLGVALGTILLPMLAKTYSNKDRHEYSRLLDWGLRLCFLLVLPCSLALAILAEPLTV SLFQYGKFTTVDAAMTQRALVAYSVGLLGIILVKVLAPGFYAQQNIRTPVKIALFTLV STQLMNLAFIGPLQHAGLALSIGLAACLNAGLLYWQLRKQRLYLPQPGWAKFLVKLVV AVLAMSAVLLATMHWLPAWEQGAMLERFLRLGLLVVAGLLAYFGMLALLGFRLRDFSR RAVL" misc_feature complement(5110856..5112370) /locus_tag="PA4562" /note="Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis) [Cell wall/membrane/envelope biogenesis]; Region: MurJ; COG0728" /db_xref="CDD:440492" gene 5112663..5112938 /gene="rpsT" /locus_tag="PA4563" /db_xref="GeneID:879605" CDS 5112663..5112938 /gene="rpsT" /locus_tag="PA4563" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S20" /protein_id="NP_253253.1" /db_xref="GeneID:879605" /translation="MANTPSAKKRAKQAEKRRSHNASLRSMVRTYIKNVVKAIDAKDL EKAQAAFTAAVPVIDRMADKGIIHKNKAARHKSRLSGHIKALSTAAA" misc_feature 5112663..5112923 /gene="rpsT" /locus_tag="PA4563" /note="Ribosomal protein S20 [Translation, ribosomal structure and biogenesis]; Region: RpsT; COG0268" /db_xref="CDD:440038" gene complement(5113005..5113469) /locus_tag="PA4564" /db_xref="GeneID:880908" CDS complement(5113005..5113469) /locus_tag="PA4564" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253254.1" /db_xref="GeneID:880908" /translation="MRKLAGLLGGLLLLPALAGAEEIGEVSTVFKWVGPNDKIVVEAF DDPKVQGVTCYLSRAKTGGVKGGLGLAEDRAEASIACRQVGPIQFSGELKDGEEVFKQ RTSLVFKSMQVVRFFDRKRNALVYLVYSDRVIEGSPQNAVTAIPLMPWPTAR" misc_feature complement(5113014..5113409) /locus_tag="PA4564" /note="Periplasmic catabolite regulation protein CreA (function unknown) [Signal transduction mechanisms]; Region: CreA; COG3045" /db_xref="CDD:442279" gene complement(5113481..5114599) /gene="proB" /locus_tag="PA4565" /db_xref="GeneID:880909" CDS complement(5113481..5114599) /gene="proB" /locus_tag="PA4565" /EC_number="2.7.2.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="gamma-glutamyl kinase" /protein_id="NP_253255.1" /db_xref="GeneID:880909" /translation="MRDKVTGARRWVVKIGSALLTADGRGLDRNAMAVWVEQMVALHC AGIELVLVSSGAVAAGMSRLGWVSRPSAMHELQAAASVGQMGLVQAWESSFALHGLQT AQVLLTHDDLSDRKRYLNARSTLRTLVELGVVPVINENDTVVTDEIRFGDNDTLAALV ANLVEADLLVILTDRDGMFDADPRNNPDAQLIYEARADDPQLDAVAGGSAGALGRGGM QTKLRAARLAARSGGHTVIVGGRIERVLDRLRAGERLGTLLTPDRSRKAARKQWLAGH LQMRGTLVLDDGAVKAVSQDHKSLLPVGVKAVQGSFRRGEMVVCVDQGGREVARGLVN YSALEAQKILGQPTDAIEALLGYVDGPELVHRDNLVLV" misc_feature complement(5113484..5114596) /gene="proB" /locus_tag="PA4565" /note="Glutamate 5-kinase [Amino acid transport and metabolism]; Region: ProB; COG0263" /db_xref="CDD:440033" gene complement(5114670..5115890) /gene="obg" /locus_tag="PA4566" /db_xref="GeneID:880877" CDS complement(5114670..5115890) /gene="obg" /locus_tag="PA4566" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="GTPase ObgE" /protein_id="NP_253256.1" /db_xref="GeneID:880877" /translation="MKFVDEVSIHVKAGDGGNGLMSFRREKFIEKGGPNGGDGGDGGS IYLEADVNLNTLVDYRYTRRFDAQRGENGGSKDCTGAKGDDLILPVPVGTTVIDANTQ EIIGDLTEPGQRLMVAQGGWHGLGNTRFKSSTNRAPRQTTPGKPGEARDLKLELKVLA DVGLLGLPNAGKSTFIRAVSAAKPKVADYPFTTLVPNLGVVSVGRYKSFVVADIPGLI EGAAEGAGLGIRFLKHLARTRILLHLVDMAPLDESDPADAAEVIVRELGRFSPALTER ERWLVLNKMDQILDPAEREARKQAVIERLGWEGPVYVISALERDGTEALSQDIMRYLD ERTLRLEEDPQYAEELAELDRRIEDEARARLQALDDARALRRSGLKNAGAVDDDDFDD EEDDGDGPEIFYVP" misc_feature complement(5114775..5115890) /gene="obg" /locus_tag="PA4566" /note="GTPase CgtA; Reviewed; Region: obgE; PRK12298" /db_xref="CDD:237047" gene complement(5116032..5116289) /gene="rpmA" /locus_tag="PA4567" /db_xref="GeneID:880878" CDS complement(5116032..5116289) /gene="rpmA" /locus_tag="PA4567" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L27" /protein_id="NP_253257.1" /db_xref="GeneID:880878" /translation="MAHKKAGGSTRNGRDSESKRLGVKLFGGQAVKAGNILVRQRGTK FHAGYGVGLGKDHTLFAKVDGVVKFETKGAFGRKYVSIVAA" misc_feature complement(5116041..5116289) /gene="rpmA" /locus_tag="PA4567" /note="50S ribosomal protein L27; Validated; Region: rpmA; PRK05435" /db_xref="CDD:235464" gene complement(5116313..5116624) /gene="rplU" /locus_tag="PA4568" /db_xref="GeneID:881148" CDS complement(5116313..5116624) /gene="rplU" /locus_tag="PA4568" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L21" /protein_id="NP_253258.1" /db_xref="GeneID:881148" /translation="MYAVIVTGGKQHKVTEGEFLKVEKLDVATGEAIDFDRVLLVANG EDVKIGLPVVEGAKVTAEVVSHGRHDKVRIIKFRRRKHHMKRQGHRQWFTEIKITGIQ A" misc_feature complement(5116316..5116624) /gene="rplU" /locus_tag="PA4568" /note="Ribosomal protein L21 [Translation, ribosomal structure and biogenesis]; Region: RplU; COG0261" /db_xref="CDD:440031" gene 5116865..5117833 /gene="ispB" /locus_tag="PA4569" /db_xref="GeneID:880946" CDS 5116865..5117833 /gene="ispB" /locus_tag="PA4569" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="octaprenyl-diphosphate synthase" /protein_id="NP_253259.1" /db_xref="GeneID:880946" /translation="MQPQAFYRVVAEDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGG KRLRPLLVLLAGKTLGYKGDDLCLLAATIEFLHTSTLLHDDVVDASGLRRGRSTANAL WGNAPSVLVGDFLYARSFEMMVELGSMPVMRIISQATRVIAEGEVLQLSKVRDASTTE ETYMEVIRGKTAMLFEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRG DAATLGKNVGDDLAEGKPTLPLIVTMRDGTEEQAALVRKAIQQGGSQDLESVCAAVEA AGALDYTANLARDYAARAIACLDTLPDNEYRSALVELSEFAVARTH" misc_feature 5116865..5117824 /gene="ispB" /locus_tag="PA4569" /note="Isoprenoid Biosynthesis enzymes, Class 1; Region: Isoprenoid_Biosyn_C1; cl00210" /db_xref="CDD:469660" misc_feature order(5117090..5117092,5117099..5117107,5117111..5117119, 5117123..5117128,5117141..5117146,5117300..5117302, 5117309..5117311,5117372..5117377,5117384..5117386, 5117495..5117500,5117507..5117509,5117537..5117539, 5117552..5117554,5117567..5117569) /gene="ispB" /locus_tag="PA4569" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:173833" misc_feature 5117099..5117128 /gene="ispB" /locus_tag="PA4569" /note="chain length determination region [active]" /db_xref="CDD:173833" misc_feature order(5117114..5117119,5117126..5117128,5117141..5117146, 5117309..5117311,5117372..5117374,5117495..5117500, 5117507..5117509,5117537..5117539,5117552..5117554, 5117567..5117569) /gene="ispB" /locus_tag="PA4569" /note="substrate-Mg2+ binding site [active]" /db_xref="CDD:173833" misc_feature order(5117114..5117119,5117126..5117128,5117141..5117146, 5117372..5117374,5117495..5117500) /gene="ispB" /locus_tag="PA4569" /note="catalytic residues [active]" /db_xref="CDD:173833" misc_feature order(5117114..5117119,5117126..5117128,5117141..5117146, 5117309..5117311,5117372..5117374) /gene="ispB" /locus_tag="PA4569" /note="aspartate-rich region 1; other site" /db_xref="CDD:173833" misc_feature order(5117132..5117176,5117516..5117521,5117537..5117554, 5117561..5117575) /gene="ispB" /locus_tag="PA4569" /note="active site lid residues [active]" /db_xref="CDD:173833" misc_feature order(5117495..5117500,5117507..5117509,5117537..5117539, 5117552..5117554,5117567..5117569) /gene="ispB" /locus_tag="PA4569" /note="aspartate-rich region 2; other site" /db_xref="CDD:173833" gene 5117971..5118195 /locus_tag="PA4570" /db_xref="GeneID:880947" CDS 5117971..5118195 /locus_tag="PA4570" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253260.1" /db_xref="GeneID:880947" /translation="MTYLIDAWLDRPHPYLRILHRETGEICAVLEEDALDELRDQGGL DLHELNSSEPLILKELVRNLFLFCYARALR" gene 5118538..5120565 /locus_tag="PA4571" /db_xref="GeneID:880955" CDS 5118538..5120565 /locus_tag="PA4571" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cytochrome C" /protein_id="NP_253261.1" /db_xref="GeneID:880955" /translation="MPASFPRLGLLGALCSIVPLLHASEPTTDAALIEKGRYVAQLGD CIACHTGPQGAPMAGGLELKTPMGTIYSTNITPDRETGIGRYSFEEFDRAMRKGVTAE GVNLYPAMPYPSYAKISEEDMRALYAYLMHGVQPVTQANTPSAMSWPFNQRWGLSLWN WAFLDDAPFTPSSDADPVINRGAYLVQGLGHCGACHTPRGIAFQEKAMSEAGRSGQFY LAGETVEQWQALSLRNLWTVEDTVQLLKTGQNRFATVSGSMTDVIHHSTQHFSDDDLL AIASYLKSLPAGKDDLPMPDSERPLAAPVDLYSSRGGLGYAQFCSDCHRKDGSGVPGM FPPLAGNPTVASANPSTLLHITLTGWKTAQTATHSRVYTMPGFAQLEDREIAEILSFV RSSWGNQGSSIDAGQVKKLRQRIEAGNGPATTFVSPRLADMLAAPNAEQVVRGMRLHL ETRELLPANVGNQLHCTSCHLNAGTVADGSPFVGVSAFFPSYAPRAGKVIGLEERING CFRRSMNGKPLPPDSADMQAMVAYFDWMKNNTRPQDKVAGRGVGKVDPALKPDPENGR KVYARQCVVCHGENGEGLRNSAGEMLFPPLWGDESFNIGAGMARTFTAAAFVKHNMPI GFQERFPLGQGGLSDQDAVDVAEYFSHQPRPDFPDKIKDWPKDKRPLDARY" misc_feature 5118658..5118933 /locus_tag="PA4571" /note="Di-haem oxidoreductase, putative peroxidase; Region: DHOR; cl21467" /db_xref="CDD:473872" misc_feature 5119243..5119731 /locus_tag="PA4571" /note="Cytochrome c, mono- and diheme variants [Energy production and conversion]; Region: CccA; COG2010" /db_xref="CDD:441613" misc_feature 5119921..5120544 /locus_tag="PA4571" /note="Thiosulfate dehydrogenase TsdA, contains C-terminal cytochrome c domain [Inorganic ion transport and metabolism]; Region: TsdA; COG3258" /db_xref="CDD:442489" gene complement(5120635..5121252) /gene="fklB" /locus_tag="PA4572" /db_xref="GeneID:880956" CDS complement(5120635..5121252) /gene="fklB" /locus_tag="PA4572" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase FklB" /protein_id="NP_253262.1" /db_xref="GeneID:880956" /translation="MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSD AFAGIDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPS GLQFEVLSTGEGAKPSREDTVRTHYHGTLIDGTVFDSSYQRGQPAEFPVGGVIAGWVE ALQLMNAGSKWRLHVPSELAYGGQAVGSIPPHSVLVFDVELLEIL" misc_feature complement(5120638..5121252) /gene="fklB" /locus_tag="PA4572" /note="peptidyl-prolyl cis-trans isomerase; Provisional; Region: PRK11570" /db_xref="CDD:183207" gene complement(5121337..5121642) /locus_tag="PA4573" /db_xref="GeneID:880965" CDS complement(5121337..5121642) /locus_tag="PA4573" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253263.1" /db_xref="GeneID:880965" /translation="MNMQDLAGRVQAGHIDALHLVSLEGGIYVLEAQMGDRAYPVEDD LGQPVSLRSVEHARQVLRGLDRVPVELVCADVDDEMCGLLAESGSFIGGLPLSIRQG" misc_feature complement(5121376..5121603) /locus_tag="PA4573" /note="Family of unknown function (DUF6482); Region: DUF6482; pfam20090" /db_xref="CDD:437922" gene complement(5121899..5122387) /locus_tag="PA4574" /db_xref="GeneID:880966" CDS complement(5121899..5122387) /locus_tag="PA4574" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253264.1" /db_xref="GeneID:880966" /translation="MERFFENAMYASRWLLAPIYMGLSLALLALTIKFFQEIFHVIPN IFAMAEADLILVLLSLIDMALVGGLLVMVMISGYENFVSQLDIDEGKEKLSWLGKMDS GSLKNKVAASIVAISSIHLLRIFMDAKNVPDNKLMWYVIIHMTFVLSAFAMGYLDKQT RH" misc_feature complement(5121902..5122387) /locus_tag="PA4574" /note="Uncharacterized membrane protein YqhA [Function unknown]; Region: YqhA; COG2862" /db_xref="CDD:442109" gene complement(5122561..5122902) /locus_tag="PA4575" /db_xref="GeneID:880973" CDS complement(5122561..5122902) /locus_tag="PA4575" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253265.1" /db_xref="GeneID:880973" /translation="MPRNLCLIRPCLGLTTRIECVVRPLAGENGLWTLLCAAGMSGSQ PSAIKAQGPFHGPLVAEGVLQAIADCLAQQGYIEAVDPPIWRLHLQGELRRLNGERRP HVGDYLFRPES" gene complement(5123053..5125506) /locus_tag="PA4576" /db_xref="GeneID:880974" CDS complement(5123053..5125506) /locus_tag="PA4576" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ATP-dependent protease" /protein_id="NP_253266.1" /db_xref="GeneID:880974" /translation="MPDSVAAGLRLAPEELTRPFAPEQFTFDTTDDLEPFRGVLGQER AVEALQFGVAMPRPGYNVFVMGEPGTGRFSFVKRYLQAEGKRVATPSDWVYLNNFDEP REPRVIELPPGSATEFSADIDRLIDNLMSTFPAVFEHPAYQQKKNAVDRAFNQRYDRA LDSVERRALEKDVALYRDSANVAFTPMKDGKALDEAEFAQLPEAERERFHKDIAALEE YLNEELASLPQWKRESSNQLRELNEETITLALQPLLAPLVEKYNNNPGVCAYLQAMQL NLLKTVVDQLVDDSRTDAQRKQGLIEQYAPNQAIVHHATSGAPVVFESHPTYDNLFGR IEYSSDQGALYTSYRQLRPGALHRANGGFLILEAEKMLGEPFVWDALKRALQSRQLKM ESPLAELGRLAAVSLTPQVIPLQLKVIIIGSRQIYYTLQDLDPDFQEMFRVLVDFDED IPLGEDSLEQFAQLLKTRTSEEGMAPLSGAAVARLATYSARLAEHQGRLSARIGDLFQ LVSEADFIRQLANEEVIQLGHIERALKAKQTRTGRVSARILDDMLAGIILIDTAGAAV GKCNGLTVLEVGDSVFGVPARISATVYPGSSGIVDIEREVNLGQPIHSKGVMILTGYL GSRYAQEFPLEISASIALEQSYGYVDGDSASLGEVCTLISALSRTPLKQCFAITGSIN QFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGVIIPRANVTTLMLDERVLQAVRAGQF HVYAVREVDEALALLVGKPVGAQDEKGRFPKGSVNDLVVARLQEISELGMEEDDKEKD KPAEKETVAAKDKAAAKKD" misc_feature complement(5123107..5125242) /locus_tag="PA4576" /note="Predicted ATP-dependent protease [Posttranslational modification, protein turnover, chaperones]; Region: LonB; COG1067" /db_xref="CDD:440686" gene complement(5125605..5125931) /locus_tag="PA4577" /db_xref="GeneID:880981" CDS complement(5125605..5125931) /locus_tag="PA4577" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253267.1" /db_xref="GeneID:880981" /translation="MSAFDPATALETLATEYAARAAAIRRDLARSHSPDFAEQAVQRQ NDEVLEGLLAEAEAGMRQVGLARLRLAEGRYGQCERCGEAIEPARLAALPAAEYCLRC ADLVHR" misc_feature complement(<5125674..5125904) /locus_tag="PA4577" /note="RNA polymerase-binding transcription factor DksA [Transcription]; Region: DksA; COG1734" /db_xref="CDD:441340" gene 5126166..5126654 /locus_tag="PA4578" /db_xref="GeneID:880982" CDS 5126166..5126654 /locus_tag="PA4578" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253268.1" /db_xref="GeneID:880982" /translation="MKRILLGTLFAAASFNAFADAPGGAGCGWGNMLFKGQRGVATHV VAATTNGTSGNNTFGMTTGTNGCHTNGALSYGGKPLLVLGSMMDELSEDMAKGNGEAL TTYAVVLGVQPQDREHFAAVTHEHFSEIFNKSDATAADVYANTQAILKQDARLAKYAE QA" misc_feature 5126229..5126636 /locus_tag="PA4578" /note="Protein of unknown function (DUF3015); Region: DUF3015; pfam11220" /db_xref="CDD:431737" gene 5126713..5128569 /locus_tag="PA4579" /db_xref="GeneID:880988" CDS 5126713..5128569 /locus_tag="PA4579" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253269.1" /db_xref="GeneID:880988" /translation="MPKRLLPWMALCACSPLLAAPTVPEARLQQLAADPYWIALGHYE RGKLGGWRSYVDDERFFLADNGESHPDAELAATLKALYASPSLGDKHAQCVYPARTRW LRQQLQLDDLPQPQCGEYDNWYRDINPHSAVLVFPAAYLNSPSSMFGHTLLRIDQADV TSNNTALLSYALNFGAYIEGMDNSILYAWKGLMGGYPGLFALVPYREKLAEYSRLENR DLWEYKLNLTPEETGRMVEHVWELKQVRFDYYFFDENCSFRLLELMEIARPGIELTEQ FPLTAIPTDTVRAVKNAGLIERIDYRPSREKELLARAEPLDHAERDWAKRLADDDSLL DAPDFKALPMPRQALIQDAAFRLVRYRATGQARDSGIASRSYNLLRAINRNPPPDLQV ERPGQPEDGHESRTWQFAVGSRDDRAFAEYGLRMAYHDLADNAYGFPLGAQIEIGQLK LRQYEGNRWQLQNLDLVTIRSLTPRNQLLKPLSWQVAGGLERVPGEDGDENLVSHLNG GAGGSWMFGDDLLLYAMGTARIENNRDFAAAIAPAVGFDSGLLWRNPLGNLTLEAKGD YFHNGEVRRSLGFVQQVELGRDLGLRLGAEREFSHVGKPINEVKLELRWYYY" misc_feature 5127070..5127585 /locus_tag="PA4579" /note="Domain of unknown function (DUF4105); Region: DUF4105; pfam13387" /db_xref="CDD:433167" gene complement(5128563..5129117) /locus_tag="PA4580" /db_xref="GeneID:880989" CDS complement(5128563..5129117) /locus_tag="PA4580" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253270.1" /db_xref="GeneID:880989" /translation="MSEIMDVERLRQRCAAGESFKYLYFWGHRPATDDKVGKSCFSQW YEASFKLDGVRYPSAEHYMMAAKARLFDDPRLLERILAARSPGEAKALGREVAGFDEA RWNAERVGIVIEGNLGKFGQNASLKKYLLGTADRVLVEASPVDAIWGIGLAASDPLAA EPATWQGLNLLGFALMEVRRRLAQ" misc_feature complement(5128572..5129048) /locus_tag="PA4580" /note="NADAR domain; Region: NADAR; pfam08719" /db_xref="CDD:462576" gene complement(5129173..5130768) /gene="rtcR" /locus_tag="PA4581" /db_xref="GeneID:880996" CDS complement(5129173..5130768) /gene="rtcR" /locus_tag="PA4581" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcriptional regulator RtcR" /protein_id="NP_253271.1" /db_xref="GeneID:880996" /translation="MKRTVAIGFIGATLDRLGKGAARWQKWRPSIGLCQQPDLLIDRL ELIHGNDARDLGLAERIRADIAAVSPHTEVRLQQMELRNPWDFEEVYGALHDFVSAYP FDTEREDYLVHITTGTHVAQICWFLLTEARYLPARLVQTSPSRRKDEARHPEGSATLI DLDLSRYDRIASRFRREQEESLALLKSGIATRNAAFNRSIEQIERVAVRSRAPMLLVG PTGAGKSFLARRIYELKRSRHQLDGRFVEVNCATLRGDGAMSALFGHVKGAFTGAQNA REGLLRAADGGMLFLDEIGELGADEQAMLLKAIEEKRFFPLGSDREVESDFQLIAGTH RDLRGRVAEGLFREDLFARINLWTFELPGLAGRREDIEPNIDFELERHAREQGRQVRF NLEAKRRYLAFAGSSEARWAGNFRELSASITRMATLADSGRIDEALVEEEILRLRQAW GLDAGREPLADLLGQRVEALDLFDRLQLQAVLEVCRGAKTLSEAGRRLFAVSRQDKRN PNDADRLRKYLARFGLDWAQIRA" misc_feature complement(5129176..5130768) /gene="rtcR" /locus_tag="PA4581" /note="Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription, Signal transduction mechanisms]; Region: RtcR; COG4650" /db_xref="CDD:443688" gene 5131082..5131155 /locus_tag="PA4581.1" /db_xref="GeneID:3240224" tRNA 5131082..5131155 /locus_tag="PA4581.1" /product="tRNA-Arg" /db_xref="GeneID:3240224" gene 5131428..5132573 /locus_tag="PA4582" /db_xref="GeneID:881002" CDS 5131428..5132573 /locus_tag="PA4582" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253272.1" /db_xref="GeneID:881002" /translation="MKMLKRFIVKKNERGLLYSEGDFLAVLEPGTYRRFDPYDRLSLE SFSLNTPQFEHRLAGYLRQSEPQLVERYFTRMDLGDNEAGLRYEDGVLVELLAPGSRR LYWKGQTEQRLERIDLTQDYRLSAALVAQLHQPNLRDRALAGLDAVLLVQVPAFQVGV LKVDGALAGLLQAGQYGFWRYNRQVSVELVDTRIQALEVSGQEILTRDKVSLRLNLAA NWRYSDVLTAFSRLSKPLEYLYRELQFGLRAAVGTRTLDELLENKQSIDEAVSAHLAA KLEDNGLEVSGLGVRDIILPGEMKTLLAQVVEAEKAAQANVIRRREETSATRSLLNTA KVMEENPTALRLKELETLERVAERIDRISVFGGLDQVLNGLVTLKQA" misc_feature 5131884..5132528 /locus_tag="PA4582" /note="Uncharacterized prokaryotic subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; Region: SPFH_eoslipins_u2; cd13438" /db_xref="CDD:259816" gene 5132629..5133843 /locus_tag="PA4583" /db_xref="GeneID:881003" CDS 5132629..5133843 /locus_tag="PA4583" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253273.1" /db_xref="GeneID:881003" /translation="MKDMNILEVAGGKPIKLWTQGVPVEEEARQQLLNTAKMPFIFKH LAVMPDVHLGKGSTIGSVIPTLGAIIPAAVGVDIGCGMIAARTSLVAADLPDNLHGLR SAIEQAVPHGKTFGRRDRGAWHEVPEAADQAWKALAGRFKAITDKHPRLEKTNNRQHL GTLGTGNHFIEVCLDEADRVWFMLHSGSRGVGNAIGNLFIELAKADMRQHIANLPDKD LAYFEEGSRNFDDYVEAVGWAQDFARQNRALMMHAVIEAARQVIRKPFEANLEAVDCH HNYVQKERHFGQEVLVTRKGAVSAQKGQLGIIPGSMGAKSFIVRGLGNQEAFCSCSHG AGRTMSRTKAKKVFSVADQARATAHVECRKDADVIDEIPMAYKDIDRVMEAQRELVEV LHTLRQVVCVKG" misc_feature 5132644..5133840 /locus_tag="PA4583" /note="RNA-splicing ligase RtcB, repairs tRNA damage [Translation, ribosomal structure and biogenesis]; Region: RtcB; COG1690" /db_xref="CDD:441296" gene 5133880..5134692 /locus_tag="PA4584" /db_xref="GeneID:881009" CDS 5133880..5134692 /locus_tag="PA4584" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253274.1" /db_xref="GeneID:881009" /translation="MNREERHPLPAAMRERVLDELERIEREHDVVVLYACESGSRAWG FASPDSDYDVRFVYVHQPEWYQRVEEPRDVIERPLSDELDISGWELRKALRLMRKSNP ALLEWLGSPLVYREEPGVREELLWLGSAFHSVPGSRHHYLSMARKNYRGYLKGDSVRL KKYLYVLRPLFAVRWLDAGLGLPPVAFERLVEATLDDPSLREELDALLSLKRQRDESA YGPPRLALQRFIEAELLQAERGATQPTGARQDSRLLDRYLHDKIWQYTRETS" misc_feature 5133919..5134659 /locus_tag="PA4584" /note="RNA repair pathway DNA polymerase beta family; Region: RlaP; pfam10127" /db_xref="CDD:431073" gene 5134689..5135714 /gene="rtcA" /locus_tag="PA4585" /db_xref="GeneID:881010" CDS 5134689..5135714 /gene="rtcA" /locus_tag="PA4585" /EC_number="6.5.1.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="RNA 3'-terminal-phosphate cyclase" /protein_id="NP_253275.1" /db_xref="GeneID:881010" /translation="MRKDLIELDGSEGGGQILRSALSLSMTSGQPLRIRNIRGRRSRP GLLRQHLTAVRAAAEICAAEVEGAELGSRELAFRPGAIRAGDYAFAIGSAGSCSLVLQ TLLPALLAANGESRVRISGGTHNPLAPPADFLRDSWLPLLQRMGAEVDLELLRHGFVP AGGGELLARVRPARWRPLQLEHPGAALRRQARALLAGIPGHVGERELERVRQRLGWSD EERQLEFLAEDQGPGNALLLRIDCEHICATFCAFGQAGVSAERVAEQVATQAIGWMES GCAADEHLADQLLLPMALAGAGSFTTPRLSAHLQSNRRVIERFLPVRIGDQALDGGGH RIVITSA" misc_feature 5134698..5135702 /gene="rtcA" /locus_tag="PA4585" /note="RNA 3'-terminal phosphate cyclase; Region: PRK04204" /db_xref="CDD:235255" gene 5135816..5136193 /locus_tag="PA4586" /db_xref="GeneID:881020" CDS 5135816..5136193 /locus_tag="PA4586" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253276.1" /db_xref="GeneID:881020" /translation="MSSSRLGVLVLALILLTATLLGGCESTHQYLLAKGYPPAYADGF DDGCGSGRQAAGSISGEFRKDVPRYLREAIYASGWGDGFEQCRSMARSEERRRFEERQ WDDRDDDWQRDRDRALARALRER" gene 5136317..5137357 /gene="ccpR" /locus_tag="PA4587" /db_xref="GeneID:881021" CDS 5136317..5137357 /gene="ccpR" /locus_tag="PA4587" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="cytochrome C551 peroxidase" /protein_id="NP_253277.1" /db_xref="GeneID:881021" /translation="MQSSQLLPLGSLLLSFATPLAQADALHDQASALFKPIPEQVTEL RGQPISEQQRELGKKLFFDPRLSRSHVLSCNTCHNVGTGGADNVPTSVGHGWQKGPRN SPTVFNAVFNAAQFWDGRAKDLGEQAKGPIQNSVEMHSTPQLVEQTLGSIPEYVDAFR KAFPKAGKPVSFDNMALAIEAYEATLVTPDSPFDLYLKGDDKALDAQQKKGLKAFMDS GCSACHNGINLGGQAYFPFGLVKKPDASVLPSGDKGRFAVTKTQSDEYVFRAAPLRNV ALTAPYFHSGQVWELKDAVAIMGNAQLGKQLAPDDVENIVAFLHSLSGKQPRVEYPLL PASTETTPRPAE" misc_feature 5136467..5137294 /gene="ccpR" /locus_tag="PA4587" /note="Cytochrome c peroxidase [Posttranslational modification, protein turnover, chaperones]; Region: MauG; COG1858" /db_xref="CDD:441463" gene complement(5137417..5138754) /gene="gdhA" /locus_tag="PA4588" /db_xref="GeneID:881027" CDS complement(5137417..5138754) /gene="gdhA" /locus_tag="PA4588" /EC_number="1.4.1.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutamate dehydrogenase" /protein_id="NP_253278.1" /db_xref="GeneID:881027" /translation="MTQSVDAFLERLKRRDPDQPEFHQAVEEVLRSLWPFLEANPHYL EAGIIERIVEPERAILFRVPWVDDQGRVRVNRGYRVQMSSAIGPYKGGLRFHPSVNLG VLKFLAFEQVFKNSLTTLPMGGGKGGSDFDPKGKSDAEVMRFCQSFMSELYRHVGADL DVPAGDIGVGAREIGYLFGQYKRLSNQFTSVLTGKGLSYGGSLIRPEATGFGCVYFAQ EMLKDRGRGFDGQRVAISGSGNVAQYAARKVMEMGGKVISLSDSEGTLYAEAGLSDEQ WEYLMELKNVRRGRIREMAEQFSLQFLEGRRPWGLACDIALPCATQNELDAEDARRLL ANGCVCVAEGANMPSTLEAVDLFLEAGILYAPGKASNAGGVAVSGLEMSQNAMRLRWS EGEVDTKLHGIMQSIHHACLLYGEEQGRVNYVKGANIAGFVKVADAMLAQGVV" misc_feature complement(5137420..5138754) /gene="gdhA" /locus_tag="PA4588" /note="NADP-specific glutamate dehydrogenase; Region: PRK09414" /db_xref="CDD:181834" protein_bind complement(5138836..5138877) /experiment="Beta-gal reporter assay [PMID: 15175298]" /experiment="DNAse footprinting [PMID: 15175298]" /experiment="EMSA [PMID: 15175298]" /note="Transcription factor binding site for NP_249584.; Evidence of regulation for: PA4588" /bound_moiety="ArgR" gene complement(5139050..5140441) /locus_tag="PA4589" /db_xref="GeneID:881028" CDS complement(5139050..5140441) /locus_tag="PA4589" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253279.1" /db_xref="GeneID:881028" /translation="MPLLCALIVGGLFGTSQAQAGGFMVPTTNTAGWGRAMAGGSLFP NDPSAAFNNPAAMAFIDKRIAQLTVNYADIDIKYNGDAYDYQGNPMTGGYQDGPGTPE LGTNDGGQAGFGAWLPTGFLVVPINDRFAFGLSQVVPMGMRSTWDPNWKGRDFAVDTK IETIGLTGSLSFKVNDNFSLGAGVIIQRTSGFVSQNLDLYASAANSPGMGGIPFPASN SSALMRVKVDNTSPGFFAGAVWKPTDRDTLGFAYHAKIRNKLKGHYNLYDHDGGLTEG AIEGGTPGLAYPGLDLRMGASASARLDIPAYASLDWVHQFNDRLSLGASATWTEWSSF QDLTLKSHGNTIVSIPYTYRNTWTLAVGGDYKVTDQWTMRAGVAYDQTPTHNATRDPR IPDGDRYFASLGAGYRFQSMPELSIDAAYSRQFVKEVPLKTVNQDRLGGGRLDGRATS KGQVFSLSATYDF" misc_feature complement(5139053..5140378) /locus_tag="PA4589" /note="Outer membrane protein transport protein (OMPP1/FadL/TodX); Region: Toluene_X; pfam03349" /db_xref="CDD:427255" gene complement(5140701..5141189) /gene="pra" /locus_tag="PA4590" /db_xref="GeneID:881035" CDS complement(5140701..5141189) /gene="pra" /locus_tag="PA4590" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="protein activator" /protein_id="NP_253280.1" /db_xref="GeneID:881035" /translation="MKSIKSLPSFAALALCLSVSSMASAATITPVNSAFTAPGTISVS SPASLNLPVTCNITFKGKTAADGSYASIDSVTVSGSNTLCSVPQMTGLPWKLTVSSTT AGKVDGVGFKILSSTCGPSTVNGSWSNATNTLSASNQSLAGNCKINSLSVKPTPAFVV NP" misc_feature complement(5140704..5141189) /gene="pra" /locus_tag="PA4590" /note="alkane oxidation protein activator PraB; Region: PraB; cl46047" /db_xref="CDD:480387" gene complement(5141786..5143063) /locus_tag="PA4591" /db_xref="GeneID:881042" CDS complement(5141786..5143063) /locus_tag="PA4591" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253281.1" /db_xref="GeneID:881042" /translation="MTTDRFSFLRRPALPLAVGLAVVAALAWLVFAGGTAKRTEGERW VAVRAAPLVHQIGLVGRLEPGRVVTLAAPFAGNVEALLVEPGQRVAEGQELLRMDTRE IAVQVREAQSALLKARRTLQDLRDWERGEDMARVRRALRSAQLAQSSTERKLRETREL FQRGIVPRNELDDLEQQASQQRMDLEAARREVESTRAKGQGENRQIAEMDLANASVKY ETLQAQLDGRTVRAPFAGIVVAAPGLAGEQGSREPVQAGSKLGQGQALFGLASVERLK VSAKVSELDINQLREGQAVEISGDGFEGTTLAGVIAALGGQALPGMAQGGSPQFEVTV SVAPLDPRQLQKIRLGMSAKLTVTTYRNEQAIVVPPEAIRHEGDRLFVDFRQAPGASV MAQQVKIGSSTPEGVEVFELQPGLVRVPSSSDR" misc_feature complement(5141819..5142925) /locus_tag="PA4591" /note="Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms]; Region: AcrA; COG0845" /db_xref="CDD:440606" gene complement(5143053..5144534) /locus_tag="PA4592" /db_xref="GeneID:881043" CDS complement(5143053..5144534) /locus_tag="PA4592" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253282.1" /db_xref="GeneID:881043" /translation="MNRWGLGVLWLVTALPVAASVNPALSPDVPSMAREQGRSVLLSE QVIDLSLSDAVYLGLRNNRGIRSAYLQRIAQKFDLRVAADAFNPKLVVRGDYRANRAT EDRTRTSNVSPTATLLGEYGTRFSLAWVKQFRTADEAGRYRSDGLDLTVVQPLLRDAG WDVTTAPLRLARLSEDANRLQLKASVSQTISQVIGAYRELLRAQEQARIAREALARTQ ELLEVNRAMIRAGRMAEFEIVQTEADVASQELNVEESTNQVDSARLALLQLLALDLST QIRASDALAATPIEVDRQQAIRTALQQQPEYLQRLIGSRQADLNLVLAKNQRLWDVSL VGGASQIRDRYSEGGGDNSRSWDSYAGVQVEIPIGDLSRRQAEVRAQVDVENQKILIE DARQTLEQNVIDAVRDLGTRWRQYQIAQRATALSRRKLEIEREKLRVGRSSNFQVLSF ETDLRNVENTQLNALISFLNAQTQLDLIVGMTLDSWEISLNDH" misc_feature complement(5143758..5144366) /locus_tag="PA4592" /note="Outer membrane efflux protein; Region: OEP; pfam02321" /db_xref="CDD:396757" misc_feature complement(5143095..5144054) /locus_tag="PA4592" /note="Outer membrane protein TolC [Cell wall/membrane/envelope biogenesis]; Region: TolC; COG1538" /db_xref="CDD:441147" gene complement(5144527..5145720) /locus_tag="PA4593" /db_xref="GeneID:881052" CDS complement(5144527..5145720) /locus_tag="PA4593" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_253283.1" /db_xref="GeneID:881052" /translation="MSASPSPRQLLHEALASLRGLGRRSLLALLGIVMGCSSVIAMLN IGSNATDEAMSIFKDMGTDTLVVQFPFAPQAPMPMPASLDTEPLLRDVAGLEHLAALG LYSAPVTFHGRTNNASIVGASAGLAAAARLRLREGRFLSHFDDHDTYVVVGATIAEAL GAPGDPLRLGEQLTVNDYLFRVIGILQPQASAALLPFAANDSLFVPAPGMPRLQPAAE VSHVVARVSPGADVYSVGAALGAALTARLPGHEAQVQVSQQVLDGLKRQTRTFTYLLA GLGIISLLGGGVGVMNVMLMSVAERRREIGVRMALGARQRDIRNLFLIEAVTLTAAGA LSGAVLGVAAAYLYARFSGWTFSLAYAALPLGMGSTLLVGLFFGLYPAVSAARLQPVE ALRDE" misc_feature complement(5144530..5145696) /locus_tag="PA4593" /note="ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]; Region: SalY; COG0577" /db_xref="CDD:440342" gene complement(5145717..5146403) /locus_tag="PA4594" /db_xref="GeneID:881053" CDS complement(5145717..5146403) /locus_tag="PA4594" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_253284.1" /db_xref="GeneID:881053" /translation="MISLQGIGKGYLLGGQPLQILKDVCLDIFPGESCAIVGASGSGK STLLNILGLLDRPDSGAYRFAEHDIFSVDGDRLAAIRNRLIGFVFQSFNLLPRLNALD NVALPLSYRGMPRREALERAEAMLARVGLAERAGHRPADLSGGQRQRVAIARALVGEP ALILADEPTGNLDASTAKEVLELLLTLNRERQVTLVVVTHDPGLAARLGRQLTVRHGE VHEDLAEACR" misc_feature complement(5145732..5146403) /locus_tag="PA4594" /note="ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]; Region: LolD; COG1136" /db_xref="CDD:440751" gene complement(5146907..5148571) /locus_tag="PA4595" /db_xref="GeneID:881059" CDS complement(5146907..5148571) /locus_tag="PA4595" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_253285.1" /db_xref="GeneID:881059" /translation="MAQYVYTMHRVGKIVPPKREILKDISLSFFPGAKIGVLGLNGAG KSTLLRIMAGVDTEIEGEARPMPGINVGYLPQEPKLDPQATVRDIVEEAVGQIKQAQA RLDEVYAAYAEPDADFDALAAEQAKLEAILQASDGHNLERQLEVAADALRLPPWDAKV EHLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDADSVAWLEHFLHDFPGTVVAITHD RYFLDNVAGWILELDRGHGIPFEGNYSGWLESKAARLAQEAKQEASHAKAMKAELEWV RQGAKGRQAKSKARLQRFEELQSQEFQKRSETNEIYIPAGPRLGDKVIELHNVTKGYG DRVLIDNLSLSIPKGAIVGVIGGNGAGKSTLFRMLTGKEQPDSGTIEIGETVQIASVD QSRDSLEGNKTVWEQVSDGFEQIKIGNYEVPSRSYVGRFNFKGADQQKFVKDLSGGER GRLHLALTLKQGGNVLLLDEPSNDLDVETLRALEEALLDFPGAAIVISHDRWFLDRIA THILSYEDDGKVTFFEGNYTEFEADRKKRLGDAASQPHRVRYKKLA" misc_feature complement(5146910..5148571) /locus_tag="PA4595" /note="putative ABC transporter ATP-binding protein; Reviewed; Region: PRK11819" /db_xref="CDD:236992" gene 5149064..5149582 /locus_tag="PA4596" /db_xref="GeneID:881060" CDS 5149064..5149582 /locus_tag="PA4596" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253286.1" /db_xref="GeneID:881060" /translation="MVNHPRATMGELAELAGVSRATLNRHCGTREGLKRRLESHARST LERLTHSAALQRLEPREALRELIREHLAQRDLLALLMFEQNPGRQAGHGDASWQSYVE ALDAFFLRGQQKRVFRIDISAATFSELFIVLIYGMVDAERRGRAASAGLSATLEELFL RGASNPAQPASP" misc_feature 5149079..5149471 /locus_tag="PA4596" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene complement(5149633..5151072) /gene="oprJ" /locus_tag="PA4597" /db_xref="GeneID:881070" CDS complement(5149633..5151072) /gene="oprJ" /locus_tag="PA4597" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="multidrug efflux outer membrane protein OprJ" /protein_id="NP_253287.1" /db_xref="GeneID:881070" /translation="MRKPAFGVSALLIALTLGACSMAPTYERPAAPVADSWSGAAAQR QGAAIDTLDWKSFIVDAELRRLVDMALDNNRSLRQTLLDIEAARAQYRIQRADRVPGL NAAATGNRQRQPADLSAGNRSEVASSYQVGLALPEYELDLFGRVKSLTDAALQQYLAS EEAARAARIALVAEVSQAYLSYDGALRRLALTRQTLVSREYSFALIDQRRAAGAATAL DYQEALGLVEQARAEQERNLRQKQQAFNALVLLLGSDDAAQAIPRSPGQRPKLLQDIA PGTPSELIERRPDILAAEHRLRARNADIGAARAAFFPRISLTGSFGTSSAEMSGLFDG GSRSWSFLPTLTLPIFDGGRNRANLSLAEARKDSAVAAYEGTIQTAFREVADALAASD TLRREEKALRALANSSNEALKLAKARYESGVDNHLRYLDAQRSSFLNEIAFIDGSTQR QIALVDLFRALGGGWDEGRSLVVHRGGRS" misc_feature complement(5149672..5151036) /gene="oprJ" /locus_tag="PA4597" /note="Cu(I)/Ag(I) efflux RND transporter outer membrane protein; Region: PRK09837" /db_xref="CDD:182103" gene complement(5151078..5154209) /gene="mexD" /locus_tag="PA4598" /db_xref="GeneID:881071" CDS complement(5151078..5154209) /gene="mexD" /locus_tag="PA4598" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) multidrug efflux transporter MexD" /protein_id="NP_253288.1" /db_xref="GeneID:881071" /translation="MSEFFIKRPNFAWVVALFISLAGLLVISKLPVAQYPNVAPPQIT ITATYPGASAKVLVDSVTSVLEESLNGAKGLLYFESTNNSNGTAEIVVTFEPGTDPDL AQVDVQNRLKKAEARMPQAVLTQGLQVEQTSAGFLLIYALSYKEGAQRSDTTALGDYA ARNINNELRRLPGVGKLQFFSSEAAMRVWIDPQKLVGFGLSIDDVSNAIRGQNVQVPA GAFGSAPGSSAQELTATLAVKGTLDDPQEFGQVVLRANEDGSLVRLADVARLELGKES YNISSRLNGTPTVGGAIQLSPGANAIQTATLVKQRLAELSAFFPEDMQYSVPYDTSRF VDVAIEKVIHTLIEAMVLVFLVMFLFLQNVRYTLIPSIVVPVCLLGTLMVMYLLGFSV NMMTMFGMVLAIGILVDDAIVVVENVERIMAEEGISPAEATVKAMKQVSGAIVGITLV LSAVFLPLAFMAGSVGVIYQQFSVSLAVSILFSGFLALTFTPALCATLLKPIPEGHHE KRGFFGAFNRGFARVTERYSLLNSKLVARAGRFMLVYAGLVAMLGYFYLRLPEAFVPA EDLGYMVVDVQLPPGASRVRTDATGEELERFLKSREAVASVFLISGFSFSGQGDNAAL AFPTFKDWSERGAEQSAAAEIAALNEHFALPDDGTVMAVSPPPINGLGNSGGFALRLM DRSGVGREALLQARDTLLGEIQTNPKFLYAMMEGLAEAPQLRLLIDREKARALGVSFE TISGTLSAAFGSEVINDFTNAGRQQRVVIQAEQGNRMTPESVLELYVPNAAGNLVPLS AFVSVKWEEGPVQLVRYNGYPSIRIVGDAAPGFSTGEAMAEMERLASQLPAGIGYEWT GLSYQEKVSAGQATSLFALAILVVFLLLVALYESWSIPLSVMLIVPIGAIGAVLAVMV SGMSNDVYFKVGLITIIGLSAKNAILIVEFAKELWEQGHSLRDAAIEAARLRFRPIIM TSMAFILGVIPLALASGAGAASQRAIGTGVIGGMLSATFLGVLFVPICFVWLLSLLRS KPAPIEQAASAGE" misc_feature complement(5151096..5154209) /gene="mexD" /locus_tag="PA4598" /note="AcrB/AcrD/AcrF family; Region: ACR_tran; cl47191" /db_xref="CDD:481531" protein_bind 5151828..5151840 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(5154237..5155400) /gene="mexC" /locus_tag="PA4599" /db_xref="GeneID:881078" CDS complement(5154237..5155400) /gene="mexC" /locus_tag="PA4599" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="resistance-nodulation-cell division (RND) multidrug efflux membrane fusion protein MexC" /protein_id="NP_253289.1" /db_xref="GeneID:881078" /translation="MADLRAIGRIGALAMAIALAGCGPAEERQEAAEMVLPVEVLTVQ AEPLALSSELPGRIEPVRVAEVRARVAGIVVRKRFEEGADVKAGDLLFQIDPAPLKAA VSRAEGELARNRAVLFEAQARVRRYEPLVKIQAVSQQDFDTATADLRSAEAATRSAQA DLETARLNLGYASVTAPISGRIGRALVTEGALVGQGEATLMARIQQLDPIYADFTQTA AEALRLRDALKKGTLAAGDSQALTLRVEGTPYERQGALQFADVAVDRGTGQIALRGKF ANPDGVLLPGMYVRVRTPQGIDNQAILVPQRAVHRSSDGSAQVMVVGADERAESRSVG TGVMQGSRWQITEGLEPGDRVIVGGLAAVQPGVKIVPKPDGAQAQAQSPAPQQ" misc_feature complement(5154276..5155400) /gene="mexC" /locus_tag="PA4599" /note="MexC family multidrug efflux RND transporter periplasmic adaptor subunit; Region: RND-peri-MexC; NF033138" /db_xref="CDD:411094" gene 5155561..5156124 /gene="nfxB" /locus_tag="PA4600" /db_xref="GeneID:881079" CDS 5155561..5156124 /gene="nfxB" /locus_tag="PA4600" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator NfxB" /protein_id="NP_253290.1" /db_xref="GeneID:881079" /translation="MTLISHDERLIKALAVAIVDRPRATLKELAEAAGVSKATLHRFC GTRDNLVQMLEDHGETVLNQIIQACDLEHAEPLEALQRLIKEHLTHRELLVFLVFQYR PDFLDPHGEGARWQSYLEALDAFFLRGQQKGVFRIDITAAVFTELFITLVYGMVDAER RGRAASSNSAHTLEQMFLHGASNPARS" misc_feature 5155582..5156022 /gene="nfxB" /locus_tag="PA4600" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene 5156368..5160615 /gene="morA" /locus_tag="PA4601" /db_xref="GeneID:881084" CDS 5156368..5160615 /gene="morA" /locus_tag="PA4601" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="motility regulator" /protein_id="NP_253291.1" /db_xref="GeneID:881084" /translation="MSTPSLTPSPPPAGDPLTVPDRPAAKAGLLLLVLLMLGLLLWQM SQELRQQERFEHERAAAQLDRLNDRLSLTLELKARTALALLPGVPPSERGEIQGRLLP RISDALPQVRQLQWVDSAPQTDSPSPETTLPEQLRQHAGSGLYHYCLDPRDGESLYLT LREPGSRRDSGFWLLHLASDSLAQWSPDLPTGNLLWRLEDQYAGRVLWHTPGSTALLD DMQTLGVEPLRNSDWQLRGLYDSTRVRLGLLPGIGGELAIFLLLVGVTVYMLLRLHRE QQGLRAMTLASQRSLRQAATALAAIDERVLVTRADGRLSYLNPQAERLFGISSAQARQ HHLLGLLPDLEPGWLTDAGGDGETRSELLPLRVRGEPRTFTLSRHPLASYPALADQAW TLREQILQGGQVWVLRDVTEEQHALGVLEETRRRYQDIFEGVGVALCVLDLSALRQAL VEQGLDSCAALRAWLAGEPGRQQALLERIRITEINDVSRRLLQIDSTEQAWQRLLDHG PLQPDSLRLQVIEALIERRPVLELEATLRCGKSTPRHLWLQLRLPENPGEWHAVTLSL SDVTSRKEVELSLIEREKFWSDAVQAVPDTLYIHDLHARRVIFSNHHLGQQLGYNQEE LARMGENFWETLLHPDDQEYYWRIRNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIREQ AFSRDRSGRVARLIGVAKDITFTVEANNALRENGRRYRMLAENISDVIFSTDAELNAS YVSPSVQHVFGYSPEWALLNGLHQTATNPRQLGRLNGLLRRVRHAIGDRQKLAELREN PGQHLFALDCLRADGRKIPIELRIVLMWDEHDRFEGLLGIARDISQQRRAERELRMAA TVFEHSTAAIMVTDPAGYIVQVNDSFSRLTGYSPADVLDQQPRLLTADRQEANQLKHV LASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSFVCFFSDISERKASER RIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDSLGHA AGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGR LARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAE MNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPP SEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGER IAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLN YLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFL REHGCDEVQGYLFGRPMPAEQFGMLYASDVLFMFNEG" misc_feature 5157220..5158104 /gene="morA" /locus_tag="PA4601" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature 5158087..5158923 /gene="morA" /locus_tag="PA4601" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature 5158678..5160585 /gene="morA" /locus_tag="PA4601" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" gene 5160738..5161991 /gene="glyA3" /locus_tag="PA4602" /db_xref="GeneID:881085" CDS 5160738..5161991 /gene="glyA3" /locus_tag="PA4602" /EC_number="2.1.2.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="serine hydroxymethyltransferase" /protein_id="NP_253292.1" /db_xref="GeneID:881085" /translation="MFSRDLTLARYDAELFAAMEQEAQRQEEHIELIASENYTSPAVM EAQGSVLTNKYAEGYPHKRYYGGCEYVDIVEQLAIDRAKQLFGADYANVQPHAGSQAN AAVYLALLSAGDTILGMSLAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVER LAVEHKPKMIVAGFSAYSQVLDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVP FADVVTTTTHKTLRGPRGGLILARANEEIEKKLNSAVFPSAQGGPLEHVIAAKAVCFK EALQPEFKTYQQQVLKNAQSMAQVFLDRGFDVVSGGTQNHLFLLSLIKQDITGKDADA ALGRAFITVNKNSVPNDPRSPFVTSGLRIGTPAVTTRGFKEAECRELAGWICDILENM GDESVVDGVREKVKAICAKFPVYGN" misc_feature 5160756..5161988 /gene="glyA3" /locus_tag="PA4602" /note="serine hydroxymethyltransferase; Reviewed; Region: glyA; PRK00011" /db_xref="CDD:234571" misc_feature order(5160771..5160773,5160777..5160779,5160798..5160803, 5160828..5160830,5160843..5160845,5160897..5160899, 5160951..5160956,5160978..5160980,5161023..5161025, 5161044..5161046,5161149..5161154,5161527..5161529, 5161581..5161583) /gene="glyA3" /locus_tag="PA4602" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:99733" misc_feature order(5160840..5160842,5160900..5160902,5160930..5160932, 5161029..5161034,5161113..5161115,5161260..5161262, 5161335..5161337,5161344..5161346,5161419..5161424, 5161440..5161442,5161821..5161823) /gene="glyA3" /locus_tag="PA4602" /note="glycine-pyridoxal phosphate binding site [chemical binding]; other site" /db_xref="CDD:99733" misc_feature order(5160840..5160842,5161113..5161115,5161422..5161424, 5161821..5161823) /gene="glyA3" /locus_tag="PA4602" /note="active site" /db_xref="CDD:99733" misc_feature order(5160906..5160908,5160927..5160929,5161098..5161100, 5161110..5161112,5161116..5161118,5161503..5161505, 5161773..5161775) /gene="glyA3" /locus_tag="PA4602" /note="folate binding site [chemical binding]; other site" /db_xref="CDD:99733" gene complement(5162069..5162449) /locus_tag="PA4603" /db_xref="GeneID:881090" CDS complement(5162069..5162449) /locus_tag="PA4603" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253293.1" /db_xref="GeneID:881090" /translation="MEMDRNALIGAWRDCIRGADKSWVLFAQGTCVILTQPEPDLAAQ ARALLAEWGAVQVGTPAGDFGVITLDNGRGWVVTGHHPDILTFVPREELEEDAGELLV GMHGRSRRGEDAEALAVIHVEDRR" gene complement(5162472..5163476) /locus_tag="PA4604" /db_xref="GeneID:881091" CDS complement(5162472..5163476) /locus_tag="PA4604" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253294.1" /db_xref="GeneID:881091" /translation="MSEVANDNHAPIPVTVLTGFLGAGKTTLLKYLLQAEHGMKIAVI ENEYSETPIDGQLLGVEPVQVMTLSNGCVCCSINTDLEKALFLLLERRDNGEIDFDRL VIECTGLADPAPVAQTFFADEELCQRYVLDGIITLVDAANAERHLQETIAQAQVGFAD RILVSKTDLVDAATFEALGQRLQRINRRALVHVVEHGRIDLAHLLDVRGFNLNADLGP GIGLRPLRAVAAKDSRDRIGTLVLRSDTPLDLERLSEFMDDLLQWHGNSLLRYKGVLN IADEPRRLVFQGVLRLYGFDWDSEWRDDEARESVIVFIGDNLPEDSIREGFERIVEGR " misc_feature complement(5162487..5163446) /locus_tag="PA4604" /note="putative GTP-binding protein YjiA; Provisional; Region: PRK11537" /db_xref="CDD:183183" gene complement(5163536..5163739) /locus_tag="PA4605" /db_xref="GeneID:881097" CDS complement(5163536..5163739) /locus_tag="PA4605" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253295.1" /db_xref="GeneID:881097" /translation="MFNDLSRMGKYLGQAARMLVGMPDYDTYVEHMRNKHPDKPVMTY EEFFRERQEARYGGGKGRPIRCC" misc_feature complement(5163539..5163739) /locus_tag="PA4605" /note="Uncharacterized short protein YbdD, DUF466 family [Function unknown]; Region: YbdD; COG2879" /db_xref="CDD:442126" gene complement(5163788..5165854) /locus_tag="PA4606" /db_xref="GeneID:881098" CDS complement(5163788..5165854) /locus_tag="PA4606" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253296.1" /db_xref="GeneID:881098" /translation="MNNNNSLLRHLAWLVVAIVGAAALGVVALRRGEAINALWIVVAA VAIYLVAYRYYSLFIASKVMQLDPNRATPAVLNNDGLDYVPTNKHILFGHHFAAIAGA GPLVGPVLAAQMGYLPGTLWLIAGVVLAGAVQDFMVLFISSRRNGRSLGELVREEMGQ VAGTIALFGAFLIMIIILAVLALIVVKALADSPWGMFTVLATIPIALFMGVYMRFIRP GRIGEISIIGVFLLLGSIWLGGQVAASPEWAPHFTFSGIQITWMLIGYGAVASVLPVW LLLAPRDYLSTFLKIGTIIGLAIGILIVMPELKMPALTQFTDGTGPVWKGSLFPFLFI TIACGAVSGFHALISSGTTPKLLNREPDARYIGYGGMLMESFVAIMAMVAASVIEPGI YFAMNSPPAVVGADVNAVAATVSSWGFAITPEQLTQTAQDIGETTILARAGGAPTLAV GIAHILHQVLPGENTMAFWYHFAILFEALFILTAVDAGTRAGRFMLQDLLGNFVPALK KTESWTANIIGTGGCVALWGWLLYQGVVDPLGGINTLWPLFGISNQMLAGIALMLATV VLIKMKRQQYVWVTILPAAWLLICTTTAGLIKIFDSNPAVGFVALGEKYATALDAGQV LAPAKDIGQMQHVVLNAYINAGLTVLFLLVVFSVLFYAIKVGIAAWGKSERTDKETPF EPIPDA" misc_feature complement(5163797..5165842) /locus_tag="PA4606" /note="carbon starvation protein CstA; Region: PRK15015" /db_xref="CDD:184976" protein_bind 5164449..5164461 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(5165671..5165683) /locus_tag="PA4606" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4606" /bound_moiety="AmrZ" gene complement(5166191..5166697) /locus_tag="PA4607" /db_xref="GeneID:881101" CDS complement(5166191..5166697) /locus_tag="PA4607" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253297.1" /db_xref="GeneID:881101" /translation="MDKRLLSKGLVLGLLSLGSMTAHADAAGGNGCGWGNMVFEGQRG LFPHLLATTTNGTSGNATFGMTSGTNGCNTNARLGYGGRSIFAMNGMLDNIAEDMAKG QGEALDAYAVLLGVEAKDRAHFAQVTQQHFGEIFASKDATGEQVLSNTLAVMSRDGTL ARYAKQPA" misc_feature complement(5166212..5166622) /locus_tag="PA4607" /note="Protein of unknown function (DUF3015); Region: DUF3015; pfam11220" /db_xref="CDD:431737" gene 5166900..5167277 /locus_tag="PA4608" /db_xref="GeneID:881102" CDS 5166900..5167277 /locus_tag="PA4608" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253298.1" /db_xref="GeneID:881102" /translation="MSDQHDERRRFHRIAFDADSEILQGERRWEVLLHDVSLHGILVG QPQDWNGDPQRPFEARLYLGLDVLIRMEISLAWARDGLLGFECQHIDLDSISHLRRLV ELNLGDEELLERELALLVSAHDD" misc_feature 5166918..5167208 /locus_tag="PA4608" /note="PilZ domain; Region: PilZ; pfam07238" /db_xref="CDD:399904" gene complement(5167284..5168645) /gene="radA" /locus_tag="PA4609" /db_xref="GeneID:881107" CDS complement(5167284..5168645) /gene="radA" /locus_tag="PA4609" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA repair protein RadA" /protein_id="NP_253299.1" /db_xref="GeneID:881107" /translation="MAKAKRMYGCTECGATFPKWAGQCADCGAWNTLVETVVEAAPSG SGRGGWAGQQANLKTLAEVSVEEMPRFTTGSTELDRVLGGGLVDGSVVLIGGDPGIGK STILLQTLCNLASRVPALYVTGEESQQQVAMRARRLSLPEDKLKVMTETSIETIIATA RQEQPRVMVIDSIQTIFTEQLQSAPGGVAQVRESAAMLVRYAKQSGTAIFLVGHVTKE GALAGPRVLEHMVDTVLYFEGESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSN PSAIFLTRAQEAVPGSVVMATWEGSRPMLVEVQALVDTSHLANPRRVTLGLDQNRLAM LLAVLHRHGGIPTYDQDVFLNVVGGVKVLETASDLALMAAVMSSLRNRPLPHDLLVFG EVGLSGEVRPVPSGQERLKEAGKHGFKRAIVPLGNAPKEAPAGLQVIAVTRLEQALDA LFE" misc_feature complement(5167290..5168645) /gene="radA" /locus_tag="PA4609" /note="DNA repair protein RadA/Sms, contains AAA+ ATPase domain [Replication, recombination and repair]; Region: Sms; COG1066" /db_xref="CDD:440685" gene 5168755..5169189 /locus_tag="PA4610" /db_xref="GeneID:881108" CDS 5168755..5169189 /locus_tag="PA4610" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253300.1" /db_xref="GeneID:881108" /translation="MRTLLFLHLLGAAIWVGGHLVLALGILPGALRRRDPQAIRAFEQ VYERIGIPALLLQVVSGLWLASLWLPFDHWFGATPVARALQLKLLLLAATAALGVHAR LRLIPNLDAESLPKLGWHIAAITLVGLGFVAVGQSFRFGGAF" misc_feature 5168764..>5168961 /locus_tag="PA4610" /note="Domain of unknown function (DUF4149); Region: DUF4149; cl46318" /db_xref="CDD:480658" gene complement(5169251..5169505) /locus_tag="PA4611" /db_xref="GeneID:881114" CDS complement(5169251..5169505) /locus_tag="PA4611" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253301.1" /db_xref="GeneID:881114" /translation="MPLEQHPLSREFPDFHAELKQLHGNDAHFTRLAADYESLDKRIY EVEGGREPLDDLALQGLKQQRVQLKDEIAERLRKANGKGH" misc_feature complement(5169263..5169475) /locus_tag="PA4611" /note="Uncharacterized conserved protein YdcH, DUF465 family [Function unknown]; Region: YdcH; COG2841" /db_xref="CDD:442089" gene complement(5169580..5170131) /locus_tag="PA4612" /db_xref="GeneID:881115" CDS complement(5169580..5170131) /locus_tag="PA4612" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253302.1" /db_xref="GeneID:881115" /translation="MTTMRGWILAGLLLAALAAQAGEVHGVEVEARLRDYFFDAARRG DQAMLKEFVEAGFDLDVQDAKGYTALILAAYHGHGGAVEQLLEAGADPCVQDARGNTA LMGAIFKGEVRIARRLIGAQCSPDQRNGAGQTAAMYAALFKREELLQALSARGADLGA RDALGNSVESLRRGELNGTAAAR" misc_feature complement(<5169631..>5170023) /locus_tag="PA4612" /note="Ankyrin repeat [Signal transduction mechanisms]; Region: ANKYR; COG0666" /db_xref="CDD:440430" misc_feature complement(5169844..5169936) /locus_tag="PA4612" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature complement(order(5169646..5169648,5169673..5169675, 5169682..5169684,5169694..5169699,5169703..5169711, 5169718..5169723,5169733..5169735,5169739..5169741, 5169745..5169747,5169772..5169774,5169781..5169783, 5169793..5169798,5169802..5169810,5169817..5169822, 5169832..5169834,5169838..5169840,5169844..5169846, 5169871..5169873,5169880..5169882,5169892..5169897, 5169901..5169909,5169916..5169921,5169931..5169933)) /locus_tag="PA4612" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:293786" misc_feature complement(5169745..5169840) /locus_tag="PA4612" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature complement(5169646..5169741) /locus_tag="PA4612" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" gene complement(5170185..5171726) /gene="katB" /locus_tag="PA4613" /db_xref="GeneID:881120" CDS complement(5170185..5171726) /gene="katB" /locus_tag="PA4613" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="catalase" /protein_id="NP_253303.1" /db_xref="GeneID:881120" /translation="MNPSLNAFRPGRLLVAASLTASLLSLSVQAATLTRDNGAPVGDN QNSQTAGPNGSVLLQDVQLLQKLQRFDRERIPERVVHARGTGAHGEFVASADISDLSM AKVFRKGEKTPVFVRFSAVVHGNHSPETLRDPRGFATKFYTADGNWDLVGNNFPTFFI RDAIKFPDMVHAFKPDPRSNLDDDSRRFDFFSHVPEATRTLTLLYSNEGTPASYREMD GNSVHAYKLVNARGEVHYVKFHWKSLQGQKNLDPKQVAEVQGRDYSHMTNDLVSAIRK GDFPKWDLYIQVLKPEDLAKFDFDPLDATKIWPGIPERKIGQMVLNRNVDNFFQETEQ VAMAPSNLVPGIEPSEDRLLQGRLFAYADTQMYRVGANGLGLPVNRPRSEVNTVNQDG ALNAGHSTSGVNYQPSRLDPREEQASARYVRTPLSGTTQQAKIQREQNFKQTGELFRS YGKKDQADLIASLGGALAITDDESKYIMLSYFYKADSDYGTGLAKVAGADLQRVRQLA AKLQD" misc_feature complement(5170236..5171633) /gene="katB" /locus_tag="PA4613" /note="Clade 1 of the heme-binding enzyme catalase; Region: catalase_clade_1; cd08154" /db_xref="CDD:163710" misc_feature complement(order(5170296..5170298,5170308..5170310, 5170314..5170316,5170320..5170325,5170500..5170517, 5170542..5170550,5170554..5170556,5170563..5170565, 5170569..5170574,5170584..5170586,5170596..5170607, 5170611..5170616,5170620..5170628,5170635..5170640, 5170647..5170655,5170662..5170664,5170671..5170673, 5170677..5170679,5170701..5170706,5170725..5170727, 5170734..5170736,5170740..5170745,5170749..5170751, 5170821..5170823,5170827..5170829,5170842..5170847, 5170914..5170916,5170923..5170928,5170935..5170937, 5170947..5170952,5170959..5170961,5170968..5170970, 5171160..5171162,5171169..5171171,5171181..5171198, 5171214..5171216,5171223..5171225,5171229..5171243, 5171286..5171291,5171346..5171351,5171490..5171492, 5171505..5171507)) /gene="katB" /locus_tag="PA4613" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:163710" misc_feature complement(order(5170644..5170646,5170656..5170658, 5171229..5171231,5171253..5171255,5171268..5171270, 5171370..5171372,5171484..5171486)) /gene="katB" /locus_tag="PA4613" /note="heme binding pocket [chemical binding]; other site" /db_xref="CDD:163710" protein_bind complement(5171801..5171837) /experiment="Beta-gal reporter assay [PMID: 10913087]" /experiment="EMSA [PMID: 10913087]" /note="Transcription factor binding site for NP_254031.; Evidence of regulation for: PA4613" /bound_moiety="OxyR" gene 5172253..5172666 /gene="mscL" /locus_tag="PA4614" /db_xref="GeneID:881127" CDS 5172253..5172666 /gene="mscL" /locus_tag="PA4614" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="large-conductance mechanosensitive channel" /protein_id="NP_253304.1" /db_xref="GeneID:881127" /translation="MGLLSEFKAFAVKGNVVDMAVGIIIGAAFGKIVSSFVGDVIMPP IGLLIGGVDFSDLAITLKAAEGDVPAVVLAYGKFIQTVLDFVIVAFAIFMGVKAINRL KREEAVAPSEPPVPSAEETLLTEIRDLLKAQQNKS" misc_feature 5172259..5172663 /gene="mscL" /locus_tag="PA4614" /note="large-conductance mechanosensitive channel protein MscL; Region: mscL; PRK00567" /db_xref="CDD:234795" gene complement(5172771..5173547) /locus_tag="PA4615" /db_xref="GeneID:881128" CDS complement(5172771..5173547) /locus_tag="PA4615" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_253305.1" /db_xref="GeneID:881128" /translation="MTASEEKFTRQTLLDVQPLTPNLFTLRTSRDAGFRFRAGQFARL GVYKPSGSIVWRAYSMVSAPHDEFLDFFSIVVPDGEFTSELSRLREGDQLLVDRQAFG FLTLDRFVDGRDLWLLATGTGVAPFVSILQDFEVWERFESIKLVYSVRESKELAYREL IAGLAEREYLAEHAHKLQFIPVVTREQVPGCLNGRITTLIENGDLERAADLELTPEHS RVMLCGNPQMIEDTRAVLKARGMNLSLTRRPGQVAVENYW" misc_feature complement(5172777..5173514) /locus_tag="PA4615" /note="Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently...; Region: FNR1; cd06195" /db_xref="CDD:99792" misc_feature complement(order(5172777..5172779,5173182..5173184, 5173302..5173307,5173311..5173313,5173320..5173322, 5173326..5173328,5173332..5173334,5173371..5173382, 5173425..5173427)) /locus_tag="PA4615" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99792" misc_feature complement(order(5173371..5173376,5173380..5173382)) /locus_tag="PA4615" /note="FAD binding motif [chemical binding]; other site" /db_xref="CDD:99792" misc_feature complement(order(5173242..5173244,5173248..5173250, 5173275..5173277,5173293..5173295,5173302..5173304, 5173311..5173313)) /locus_tag="PA4615" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99792" misc_feature complement(order(5173170..5173172,5173176..5173187, 5173197..5173199)) /locus_tag="PA4615" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99792" misc_feature complement(order(5172873..5172878,5173098..5173106, 5173179..5173184)) /locus_tag="PA4615" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99792" gene complement(5173654..5174652) /locus_tag="PA4616" /db_xref="GeneID:881133" CDS complement(5173654..5174652) /locus_tag="PA4616" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate-binding protein" /protein_id="NP_253306.1" /db_xref="GeneID:881133" /translation="MFKPFVGVALAALFAVSAVAHAEDAGPVVIKFSHVVSDDTPKGK GALLFKKLAEERLPGKVKVEVYPNSTLFGDADEIEALRANKVQMLATSLSKFEPYTKQ LQVFDLPFLFDDLEALKRFQKRDKSRELLRSMAKHGIYGLAYWNNGMKQLSATRELHR PDDAKGLVFRIQPSSVLEAQFAMLGATAKQLSYAETLKAMQAGSVQGTENTWSNLAGQ KIDSVQPYITETNHGALSYMLITSSAFWTGIPYQTRTELESIVDEVTLVVNKEAEALN QKEREHLLAAGKSRLVSLSAEEHEAWRNAMKPLWKNYEAQIGSDVLRAAQVVNRKR" misc_feature complement(5173675..5174568) /locus_tag="PA4616" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" gene 5174980..5176104 /locus_tag="PA4617" /db_xref="GeneID:881134" CDS 5174980..5176104 /locus_tag="PA4617" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253307.1" /db_xref="GeneID:881134" /translation="MPLFATPFAQLDLVRQPEQDGEPLQAFDAADEYLLNQLHERGVT AQCRVLVLNDAFGALAASLAPHVQVTSSGDSHLGFLALRKNLARNGLDLGSVRFVPAS ETAVGPFDHVLVKVPKTLALLEEQLIRLHGQLAPGAQVVAAGMVKHLPRAAGDLLERY IGPMHASLAVKKARLLIAEAAERPQPRSPYPTRYRLEQPPLTLLNHANVFCREGLDIG TRAFLPHLPRSLGALRAADLGCGNGVLGIAYALLNPQAELALVDESYMAVQSARENWR AALGERPATFRADDGLAGQAAGSLDLVLCNPPFHQQQVVGDFLAWRMFLQARDALAAG GELWIVGNRHLGYHAKLKRLFRGVEQVAANPKFVILKAGK" misc_feature 5175001..5176101 /locus_tag="PA4617" /note="23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG; Region: PRK15001" /db_xref="CDD:184963" gene complement(5176680..5177651) /locus_tag="PA4618" /db_xref="GeneID:881145" CDS complement(5176680..5177651) /locus_tag="PA4618" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253308.1" /db_xref="GeneID:881145" /translation="MQHLDLQVVRKALKWSVGGERVWFCTVLTTYGSAPRAPGSLLAV NASGEWIGSLSGGCVEDDFLERVAAGGFPDPAVIVRYGEGDDPNSNIRLPCGGILDVL VENLAPDCDVQAHLRELESALLGQRRLLREVELGSGARSLRDDSSHGPRAERDGECVR LRVGAAQRLLLAGYSSVAHACAEFGKGLGFEVILCDPREEALRGVVLEGIEIRRELPS LFIADGGCHADTAVVALTHDPKIDDLAMLEAVRTEAFYIGVMGSRATSEKRFERLRRI GGLGDAELARIHAPIGLNLGSKTPAEIALAVLADILRIRNGIPRERL" misc_feature complement(5176683..5177636) /locus_tag="PA4618" /note="Molybdoenzyme maturation factor PaoD (Mo cofactor insertion), XdhC/CoxF family [Posttranslational modification, protein turnover, chaperones]; Region: XdhC; COG1975" /db_xref="CDD:441578" gene complement(5177655..5178902) /locus_tag="PA4619" /db_xref="GeneID:881146" CDS complement(5177655..5178902) /locus_tag="PA4619" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cytochrome C" /protein_id="NP_253309.1" /db_xref="GeneID:881146" /translation="MKRTLSGLALALAALSPFLASAAGADAALVKRGEYLARAADCMA CHTAEGGAPFAGGLPIQSPFGTIYGTNITPDKEHGIGAYSADEFFAALTEGKRKDGAY LYPAMPYTSYHLIEREDADAIYAYLMAQEPIARPAPQTSLSFPFNVRMGLAGWNLLYG KSVRLQPEEGRSEAWKRGQYMVEVLGHCGECHTPRNLAGALEQDKRLSGGLLNGYLAP SLLPGDLAARGWTQPDLASFLKHGMSAQGSMFNEMFPVVHHSTQHLDDGDLAAMATYL LGDQPPPAKVVQALPEAQLNDSGKRGRQQYLNVCAGCHGGEGEGKPHIAVAMNGNTTL RLQDPRNLLRVIEDGIVEQQFTGFERMQPMPGFAGKLDDEQLTDLLNYLRQTWGGLPG DLGPQQVAQLKMESASAHTVKVK" misc_feature complement(5178519..5178788) /locus_tag="PA4619" /note="Cytochrome c; Region: Cytochrom_C; pfam00034" /db_xref="CDD:459641" misc_feature complement(5177736..5178278) /locus_tag="PA4619" /note="Cytochrome c, mono- and diheme variants [Energy production and conversion]; Region: CccA; COG2010" /db_xref="CDD:441613" gene complement(5178905..5179444) /locus_tag="PA4620" /db_xref="GeneID:881160" CDS complement(5178905..5179444) /locus_tag="PA4620" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253310.1" /db_xref="GeneID:881160" /translation="MANRKLQMTLNGQAVGPVEVAEDLPMIDYLHEYQNLTGSRLGCG QGICHACVVIVDNPDGTSEEVRTCITGAHYFDGKKVRTIEGHAQRDENGDIRELNPIQ QKFVDQFAFQCSYCAPGFVNAATVLVEKAQRQPIKRSELEQAIEDSLGHHICRCTGYV RYYSATRDVLDELGLVKEA" misc_feature complement(5178926..5179435) /locus_tag="PA4620" /note="Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and conversion]; Region: CutS; COG2080" /db_xref="CDD:441683" gene complement(5179437..5182268) /locus_tag="PA4621" /db_xref="GeneID:881161" CDS complement(5179437..5182268) /locus_tag="PA4621" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_253311.1" /db_xref="GeneID:881161" /translation="MSNRDISRRAFLQGGLIAGVGVTLAPLGSQAFAALFENQVTVSA QRWMAGNGQVRFRNDALSKVCGNKVFARDIRARDMPGWPQQQGHAMLLKTVRADRIYE GHDLSWLGAELQPDRIVTAADLEKDGIVFPEAHSPDPLLPPGKVPMFIGHPVAILIWN DFERFRRAKLKLKFNDKAIRYGAQAPLYQGDPYGSYRFVRVGGKTPYEDDEFSSLKDS MLFPTILNRKPVWTREPKLHGDLTEQGLFHAKRMAEQLENPPQDWLVFDERYKTPSIE PAALEPDNGNGWYDAASKTLHFVVATQCPFEVAYESVHMIKPSRFALEKLNIHPGYTV GYGSKDNNIFVFYAALAALYGEGVPVRLANDRYEQFQSGIKRHPFDIRYQLAVDRNDL GFRIFRADMSADGGGRANYSASVAAVGATAAQSIYYMPQNDLAVTAYHSRGVEAGSMR GYGTLQTMAATEMMVDEIAGRLGVDAIDLRRRNALRSGMKNTQGAVPAGALRLHEILD KAAAHEVWKDRDARKKRFDAEDPDNWYGVGFAICQKDFGTGAEAPMASIEFSADGRIS LRHIGTEIGTGMSTSQAFVVGDFLGRPADEVKTAETEWPELRLTTKGNPYLMSQAEQD AALRDPRWVGKLASPSSATNSAFYFSHATREAARVLFNHGLWPAALELWRSGPFGGQA NPYVVRRENAVWVDGQLTGNGLAPIPFAELAKKAHEMGLVTGVSVHGFNRWSWAEADF VIDGVRERLPLDAMAVKYGDGAPGVKKAMMNSAGFHLLDRQNPAYPATQLNNAMVTYY SPVATLVELKVNKGSGEVQVLDHHSWIECGRVLVPELVKGQLEGGIAMGIGHALLEEM PLYEGGPAEGDWNFNRYRLPRAKDVAVWSQTAEILPPLSPTDPAKGIAEVVMIPVVGA IANAVAHATGKRVRDLPITPARIKEALHG" misc_feature complement(5179440..5182115) /locus_tag="PA4621" /note="Aldehyde, CO or xanthine dehydrogenase, Mo-binding subunit [Energy production and conversion]; Region: CoxL; COG1529" /db_xref="CDD:441138" gene 5182579..5183790 /locus_tag="PA4622" /db_xref="GeneID:881168" CDS 5182579..5183790 /locus_tag="PA4622" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_253312.1" /db_xref="GeneID:881168" /translation="MSSQPSSLLRHRPFLAFWLARVCTASGFQMLTVAIGWHIYELTG NVLDLGLVGLVEFLPRVLFMLHTGHVADRYDRRRIAALCQAGQALVAVALVLGAASGE ITRNMIFVLAFALGTARAFEMPTTQALLPNLVPAGLFPRAVAASASAMQAATIAAPAL GGLLYAFGASWVYVPTATLYVLACVLTLSLPVRNQPLTQGKATLDSLLAGIRFIRSRP DIFGAISLDLFAVLLGGATALLPVFAKDILLTGPWGLGLLRSAPAVGALAMSFWLAHF SIERNVGRIMFLSVGIFGLATIAFGLSKSFWLSLGVLVVLGAADMVSMVIRGAFVQLE TPDEMRGRVSAVNGLFIGASNQLGEFESGLTAHWFGTVPAVVLGGIGTLVVTGAWMKL FPSLAQRDRLH" misc_feature 5182618..5183754 /locus_tag="PA4622" /note="Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; Region: MFS_MefA_like; cd06173" /db_xref="CDD:340863" misc_feature order(5182648..5182653,5182660..5182665,5182672..5182674, 5182768..5182770,5182933..5182938,5182942..5182950, 5182957..5182959,5183017..5183019,5183026..5183031, 5183038..5183040,5183254..5183256,5183263..5183268, 5183275..5183283,5183290..5183292,5183362..5183364, 5183374..5183376,5183533..5183538,5183548..5183550, 5183560..5183562,5183608..5183610,5183617..5183622, 5183629..5183634,5183641..5183643) /locus_tag="PA4622" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340863" gene complement(5183950..5184339) /locus_tag="PA4623" /db_xref="GeneID:881169" CDS complement(5183950..5184339) /locus_tag="PA4623" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253313.1" /db_xref="GeneID:881169" /translation="MKRPLILAIALATLTANAAFAAPRVESIALRGAQQLIASDGSDR TLERLRKTQAPRVQEERRVAESGSEQTIDRLHRDMTSREARLAENGSEQTVDRLHKDM GRVDLRLADNGSERTVDRLHREMRRPA" protein_bind complement(5184415..5184438) /experiment="Beta-gal reporter assay [PMID: 19846594]" /experiment="DNA-array expression analysis [PMID: 19846594]" /experiment="Site directed mutagenesis [PMID: 19846594]" /note="Transcription factor binding site for NP_251182.; Evidence of regulation for: PA4623" /bound_moiety="MexT" gene complement(5184642..5186348) /locus_tag="PA4624" /db_xref="GeneID:881173" CDS complement(5184642..5186348) /locus_tag="PA4624" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253314.1" /db_xref="GeneID:881173" /translation="MKPSQWTLRWVTLCGCGMLAASAAAVELPGTVQPSQLDERFKPR SEPQAKPEAPLVVPKQVAPQGSEQIRFKLREIRIEGNTRYDKAVLESYYQHMLGEQVS LAELVDLANRLTAKYRQDGFLLTQVVVPEQSIEGGKVRLQVIEGYLEHVQIKGTVDGP RVRVEELLAPLTEKRPLDADTLERGLLLVGDLPGVNVQSVLSPGQALGSSNLDVALQQ QRYEGFVSLDNRGSHYTDPTTLAFGATEFSRLGFYEQIDVLGAISPFSDATRYIQLRG TLPLGGMFAGDTLQIMGSYSKVNPDIPDSVFPFDSVSKSTEGSISYNHPFIRSRSQNL SGGLALQWKDTETRLRDFASDASNPGRDHVRVFQQRLTYDWVDRWMGINLAEVRNNIG LDMWGATKKDDERRSREVADGRFVYLNGNIGRLQGLGGPWSVYGELQWQYSFDPLLPS ERFGVGGSGIGRGFAPGNITGDRGFALKLEPRYGQAVGYSWLRSYQAYAFYDWGKTYN LDVDDDEQQKLGSIGAGVRFNLTDQLSFNPEIARQVIGEPADQRDGKRETRVLFNVVA RF" misc_feature complement(5184645..5186318) /locus_tag="PA4624" /note="Hemolysin activation/secretion protein [Intracellular trafficking, secretion, and vesicular transport]; Region: FhaC; COG2831" /db_xref="CDD:442079" gene complement(5186411..5192875) /locus_tag="PA4625" /db_xref="GeneID:881174" CDS complement(5186411..5192875) /locus_tag="PA4625" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253315.1" /db_xref="GeneID:881174" /translation="MVRPDSQRGKRTSSKAGREGRFVLAASSTLMFAIASINAAMAAP TGAQFNPNEIKISQQGKTTLIDQSTQRAIINWKGFDVSADEAVRFNQPGVTSSTLNRV TAGQESVIAGRISAPGQVIIYNSNGVVFSGSAKVDVGSLITTTANISDEHFRQGKLIF DQPGNPDARIVNDGSISVAEKGLAAFVAPSVANNGVINARLGTVAMAAGNAATIDLYG DGLVSIAVTDPVTRKPQDAQALVSNGGAIQADGGSVLITAEQASRVVDNAVNLSGVIL ARGTEVREGSVALVSKSGDIQIAGKIDVSGPKNGGDVLVSGQQVALASTASIDARGTA QGGSVRIGGDFQGRGELPRAKNATLAKGASIDVSATGKGNGGLAVVWSDGNTRMDGRI LARGGAQGGNGGLVETSGKVNLSIADSAYVSVAAPYGNGGTWLLDPTTLRIVASGGTS GSVGGANGASGDATVNASVVTGALAGGKVTLSASDRLSVEAPLITSNLGGASRGLELI ATGPAGAVDISAPILFRNGSLAIRAGGNINFLSGGTPQTSGIVDLGSGTLWMQTSTAG KISQQAGTALIAANLAGRAGSIDLASWDNYAGNLALQTFNGTLKYRQSNATGVTTSGT VFDPFINQSMTGTAQNIVSSVGTRILEANSVGTTGNYTLTADGNSEFDRLVFTALPYR RVSGSASFPTNDSSDYLVTNLRYQVNGSNVTATPNGGAPSGFTVAAGNGSVTTWTGNW GTSWGVKGFGGVIGVTDELQYDVGTGLTEELIFGLGGKTSRVDTRLDLFMREGAFNSF AERAQVEMFKTTTTAGDILSRQQTATLTANDATRVYGDVNPTLTATMSGINAIDAYVN SQFNDLYQATASTTATQASNVGQYAITGNANGSEYFSQRYQLVRQDGRLTVTPAQLIV SADAKTKVYGDADPTLTYQVSGLKNSDTAAGVLSGNLGRVAGENVGNYGILQGGLGLN TANYTLSYVGNDLRITPAQLNVIADAKTKVYGDLDPALTYQVSGLKRGDTAGAVLNGG SLSRVAGENVGVYGINQGGLGLVSSNYTLNYQGNNLTITKALLNVIADAKTKVYGDAD PALTYQVSGLKNGDTAGAVLNGGSLSRVAGENVGVYGINQGGLGLLSANYDLSYQGNN LTITKALLNVIADAKTKVYGDADPSLTYQVSGLKNGDTAGSILTGGLNRAAGENVGVY GINQGDLALNSGNYDLSYQGNNLTITKALLNVIADAKTKVYGDADPSLTYQVSGLKNG DTAGAVLNGGGLVRVSGENVGNYAIQQGGLGLVSGNYDLAYQGNNLTITKALLNVIAD AKTKVYGDADPSLTYQVSGLKNGDSAGSILTGGLNRAAGENVGVYGINQGDLALNSGN YDLSYQGNNLTITKALLNVIADAKTKVYGDADPSLTYQVSGLKNGDTAGAVLNGGGLV RVSGENVGNYAIQQGGLGLVSGNYDLAYQGNNLTITKALLNVIADAKTKVYGDADPSL TYQVSGLKNGDTAGAVLNGGSLSRVAGENVGVYGINQGDLALNSGNYDLSYQGNNLTI TKALLNVIADAKTKVYGDADPSLTYQVSGLKNGDTAGAVLNGGGLVRVSGENVGNYAI QQGGLGLVSGNYDLAYQGNNLTITKALLNVIADAKTKVYGDADPSLTYQVSGLKNGDS AGSILTGGLNRAAGENVGVYGINQGDLALNSGNYDLSYQGNNLTITKALLNVIADAKT KVYGDADPSLTYQVSGLKNGDTAGAVLNGGGLVRVSGENVGNYAIQQGGLGLVSGNYD LAYQGNNLTITKALLNVIADAKTKVYGDADPSLTYQVSGLKNGDTAGAVLNGGSLSRV AGENVGVYGINQGGLGLVSGNYDLAYQGNNLTITKALLNVIADGKTKVYGDADPSLTY QVSGLKNGDSAGSILTGGLNRDAGENVGVYGINQGGLVLTSGNYDLAYQGNDLTITKA LLNVFADAKSKQVGTADPALTYQVSGLKNGDSAGQVLAGGLGRVGGEAVGQYDILQGG LALTSGNYQLNYQGNLLSILPLPVTPGDLGQLAALSDLRELQKGRDPDTPGDAVYRTT TLENPFLENPFLRAYALGMDVSDPNLLPATAAGPAEDASAKRVGQFTDRPLRAEAESG AGCSNQSYLADYWSCFNKPLNF" misc_feature complement(5191964..5192758) /locus_tag="PA4625" /note="TPS secretion domain; Region: TPS; pfam05860" /db_xref="CDD:461762" misc_feature complement(5186738..5191810) /locus_tag="PA4625" /note="Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport]; Region: FhaB; COG3210" /db_xref="CDD:442443" protein_bind 5191076..5191088 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4625" /bound_moiety="AmrZ" gene 5193196..5194167 /gene="hprA" /locus_tag="PA4626" /db_xref="GeneID:881182" CDS 5193196..5194167 /gene="hprA" /locus_tag="PA4626" /EC_number="1.1.1.29" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycerate dehydrogenase" /protein_id="NP_253316.1" /db_xref="GeneID:881182" /translation="MSHALRAVFLDHASLDLGDLDMRPLRAAFDELQLHAASQPQEVA ARLHDARVAISNKVPIDAQCIAACPELELILISATGTNNIDLAAARERGIVVANCHGY GTPSVAQHTLALLLALATRLPDYQQAVRSGRWQQSSQFCLLDFPIVELEGKTLGLLGH GELGGAVARLAEAFGMRVLLGQLPGRPARADRLPLGELLPRVDALTLHCPLTEDTRGM LGSAELALMKPGAFLVNTARGGLVDEQALADALRGGHLGGAATDVLSVEPPRNGNPLL APDIPRLIVTPHNAWGSREARQRIVGQLAENAEAWKAGRALRVVNAG" misc_feature 5193208..5194158 /gene="hprA" /locus_tag="PA4626" /note="2-hydroxyacid dehydrogenase; Region: PRK06487" /db_xref="CDD:180588" misc_feature order(5193364..5193366,5193427..5193435,5193502..5193504, 5193907..5193909,5194057..5194059) /gene="hprA" /locus_tag="PA4626" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:240639" misc_feature order(5193430..5193432,5193502..5193504,5193514..5193516, 5193670..5193684,5193736..5193744,5193817..5193825, 5193838..5193840,5193901..5193909,5193979..5193984, 5194057..5194059,5194063..5194068) /gene="hprA" /locus_tag="PA4626" /note="putative NAD binding site [chemical binding]; other site" /db_xref="CDD:240639" gene 5194277..5195275 /locus_tag="PA4627" /db_xref="GeneID:881183" CDS 5194277..5195275 /locus_tag="PA4627" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="16S rRNA methyltransferase" /protein_id="NP_253317.1" /db_xref="GeneID:881183" /translation="MDPRSEVLLRQRHLFATPLLLAGLPADDLLAELPQAQGWSWHAG EQAQLDARFPGRSRFDTRAPTGAWTSAVLFLPKSRELTDYLLASLAARLPGGELFLVG EKRGGIERASKQLAAYGKPRKLDSARHCQLWQVRIEQAPAEPDLHALAQRYSLPLADG ELQVVSLPGVFSHGRLDRGSALLLGQLQALPGGHLLDFGCGAGVLGAVLKRRYPASRL SLLDVDAFAVESSRLTLAANGLDGEVIAADGIDGAPRELAAIVSNPPFHQGVHTDYQA SERLLQRAAEHLAPGGELRLVANSFLKYPPLIERHLGPCRTLAEGDGFRIYSARRS" misc_feature 5194283..5195266 /locus_tag="PA4627" /note="16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC; Region: rsmC; PRK09489" /db_xref="CDD:181902" gene 5195370..5196833 /gene="lysP" /locus_tag="PA4628" /db_xref="GeneID:881192" CDS 5195370..5196833 /gene="lysP" /locus_tag="PA4628" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="lysine-specific permease" /protein_id="NP_253318.1" /db_xref="GeneID:881192" /translation="MTDLNTSQGQQLRRVLKPRHLNMIAIGGSIGTGLFVASGATVAT AGPGGALLSYALIGLMVYFLMTSLGEMAAYMPVSGSFCTYGSRFVEDGFGFALGWNYW YNWAVTIAAELVAAQLVMSFWFPEVPGIYWSAIFLGIMFGLNVISARGFGESEFWFAL IKVVTVVIFIGVGLATIFGIMHGVESPGFSNFTMGDAPFVGGFQAMVGVAMIAGFSFQ GTELIGIAAGESENPRKNIPIAIRQVFWRILMFYILAIFVIGMLIPYTDPNLLKNDAS DISVSPFTLLFERAGFAAAAGVMNAVILSAILSAGNSGMYASTRMLYNLALEGKAPRL FSRVSRSGVPRNALYATTLVGALCFLTSAFGDSTVYTWLLNTSGMCGFIAWLGIAISH YRFRKGYLAQGGRLEDLPYRAKLFPFGPLFAFALCMVITLGQNYQALVGERIDWIGLL ATYISLPLFLAIWLGYRWKKRARFVRYHEMDVSPTNT" misc_feature 5195382..5196821 /gene="lysP" /locus_tag="PA4628" /note="Amino acid permease [Amino acid transport and metabolism]; Region: LysP; COG0833" /db_xref="CDD:440595" gene 5197186..5197764 /locus_tag="PA4629" /db_xref="GeneID:881193" CDS 5197186..5197764 /locus_tag="PA4629" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253319.1" /db_xref="GeneID:881193" /translation="MESLFVPTLIVALAEIGDKTQLLALLLAARFRKPWPIIAGIVAA TLANHFAAGAVGAWVASFFSEATLSWILAASFIAVALWTLVPDKLDDEESGLKKYGPF LTTLIAFFLAEMGDKTQVATVMLAAQYPHFWLVVIGTTLGMLIANVPVVLIGNLAADK LPLTLIRRLAAAAFAALGLYAAWHAAQLTGWL" misc_feature 5197186..5197689 /locus_tag="PA4629" /note="Putative Ca2+/H+ antiporter, TMEM165/GDT1 family [General function prediction only]; Region: Gdt1; COG2119" /db_xref="CDD:441722" gene 5197881..5198324 /locus_tag="PA4630" /db_xref="GeneID:881199" CDS 5197881..5198324 /locus_tag="PA4630" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253320.1" /db_xref="GeneID:881199" /translation="MPSHDLKRLARHHIELSWNKGRMALVEQLHSKDFLYKSSFIGRP LDTAGYIRLLQDIRTAMPDLEVVVEDCIGEERKVFTWSTLIGTIVRPTLGYPASDKVL SISAMGFWVFNPQGQLQELCTMFDMESFRAQLGLQTRPFAEKTLP" misc_feature 5197899..5198285 /locus_tag="PA4630" /note="conserved hypothetical protein, steroid delta-isomerase-related; Region: TIGR02096" /db_xref="CDD:273970" gene complement(5198334..5199359) /locus_tag="PA4631" /db_xref="GeneID:881200" CDS complement(5198334..5199359) /locus_tag="PA4631" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253321.1" /db_xref="GeneID:881200" /translation="MDEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHR PSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASAL GQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWA LDEQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDA AEAGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALAT LGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFR DNGYFNA" misc_feature complement(5198361..5199311) /locus_tag="PA4631" /note="A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous...; Region: Rossmann-fold NAD(P)(+)-binding proteins; cl21454" /db_xref="CDD:473865" misc_feature complement(order(5198811..5198822,5198886..5198888, 5198898..5198900,5198985..5198993,5199105..5199113, 5199225..5199233,5199288..5199290,5199294..5199299, 5199303..5199305)) /locus_tag="PA4631" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187539" misc_feature complement(order(5198886..5198888,5198898..5198900, 5198985..5198987,5199057..5199059)) /locus_tag="PA4631" /note="active site" /db_xref="CDD:187539" gene complement(5199503..5200324) /locus_tag="PA4632" /db_xref="GeneID:881207" CDS complement(5199503..5200324) /locus_tag="PA4632" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253322.1" /db_xref="GeneID:881207" /translation="MAHPFRFATLAGALLLAGCQAVNTTSGGAVGVDRKQYMFSMLSS QEVDQMYAQSYQKTLGEAKSAGVLDTSSADARRVKAIAQRLIPQTAAFRPDATGWNWE VNVVKSDELNANCGPGGKIIFYTGLIDKLKLTDDEIAAVMGHEIAHALREHGREAMSK AYGVQVASQIGALAGLGQESLQLANTGVDYLMTLPNSRANENEADLIGLELAARAGYN PEAAITLWQKMGRASGGASQPEFTSTHPSDSSRMANLQAAIPKVMPLYQQARRGK" misc_feature complement(5199539..5200093) /locus_tag="PA4632" /note="Peptidase M48C, integral membrane endopeptidase; Region: M48C_Oma1_like; cd07331" /db_xref="CDD:320690" misc_feature complement(order(5199590..5199592,5199710..5199712, 5199722..5199724,5199881..5199883,5199890..5199895)) /locus_tag="PA4632" /note="putative active site [active]" /db_xref="CDD:320690" misc_feature complement(order(5199590..5199592,5199722..5199724, 5199881..5199883,5199893..5199895)) /locus_tag="PA4632" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:320690" gene 5200487..5202625 /locus_tag="PA4633" /db_xref="GeneID:881208" CDS 5200487..5202625 /locus_tag="PA4633" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_253323.1" /db_xref="GeneID:881208" /translation="MKLKSIQFSVAALAGASVLSVVVVLVLYALFAGARTQELVQQRT QGLLEKVINERLVALARAQVSQIQRELEYPLTVVHGLANSTRLLGEPGADGMPQLNAS RDEISALLRSTVQNNPKLLDTFMAWEPNAFDTDAAFAGQPGKGYGPDGRYLPWWYRGA DGKPIVEAMADSIDSEKLLPTGVRENEFYACPKENKRPCIIDPAPYEMGGKTVMMSSF NVPIMVGDQFRGAVGADLSLAFIQDLLKRADQQLYDGAGEMALIASNGRLVAYTRDDS KLGEPAGSVLDGNEVDNLKNLTVDQPLYDIDAEHGHIELFLPFTIADSGVRWTLMLQI PQAAVFGELQQLQGELSDQRQQDILGMSLAGLVVAALGLLVVWLVGYGIARPLRQLVG MLDDIAQGEGDLTRRLSSERADELGSIAKGFNTFLGKLQNMIGQVVQSVQKVSDSSEH TADIAIRTNQGVQQQLAEIELVATAVHEMTATAQDVARNATHAAEAANHADQAAHQGK QIVESSSAAIQALASEIGRAVGVVQNLAKDSENINAILVAIRGIAEQTNLLALNAAIE AARAGEQGRGFAVVADEVRNLAQKTQQATEEIQSMIQQLQQGTRDVVKVMQDSQERTD DSVRHARQAAEALESITQAVSVINDMNTQIASAAEEQSAVAEDINRNVANIGQVANQV AGGADEASQASAELTRLAEQQRRLVNQFRV" misc_feature 5200694..5201200 /locus_tag="PA4633" /note="first PDC (PhoQ/DcuS/CitA) domain of methyl-accepting chemotaxis proteins and similar domains; Region: PDC1_MCP_like; cd12913" /db_xref="CDD:350338" misc_feature 5201171..5202622 /locus_tag="PA4633" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene complement(5202628..5203242) /locus_tag="PA4634" /db_xref="GeneID:881215" CDS complement(5202628..5203242) /locus_tag="PA4634" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253324.1" /db_xref="GeneID:881215" /translation="MSGRYALFRWNPSLAALPGFPADWRAQWNISPANQVLMVREDAG ARRADLARWGLTPAWLTDLSRTPSHARAETLAEQPMFREAFQQRRCLLPANGFYEWRG VRKRPYWVSTGERLLFFAGIWEAYPVHGQTWLSVAQVSQAAAEFRRPLLLDEAEQDTW LAPDTPLPALISLLAKPQPNLRSVALAGFVNKPETDGPECLTPA" misc_feature complement(5202631..5203242) /locus_tag="PA4634" /note="ssDNA abasic site-binding protein YedK/HMCES, SRAP family [Replication, recombination and repair]; Region: SRAP; COG2135" /db_xref="CDD:441738" protein_bind 5203316..5203334 /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA4634" /bound_moiety="Fur" gene 5203668..5204372 /locus_tag="PA4635" /db_xref="GeneID:881216" CDS 5203668..5204372 /locus_tag="PA4635" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253325.1" /db_xref="GeneID:881216" /translation="MDWKVFLLRVAVALVLGALIGAERQLRQRLTGLRTNALVSTGAC LFVLMTQGVPGLAGDASRIAAYVVSGIGFLGGGVIMRDGLNVRGLNTAATLWCTAAIG VLCSMGLLLEATLGSLVVLCANILLRDIAQRLNRQDVLPASEAEQRYEVQIVCRAEDE IQVRSLMLHSLGSSDLRLQSLHSEDLDNPAKLEVRAELLGTPEAPAQLERLVSRVSLE KGVSSVRWQVFELAAD" misc_feature 5203683..5204357 /locus_tag="PA4635" /note="MgtC family protein; Region: PRK15385" /db_xref="CDD:185283" gene complement(5204385..5204648) /locus_tag="PA4635a" /db_xref="GeneID:17373385" CDS complement(5204385..5204648) /locus_tag="PA4635a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719779.1" /db_xref="GeneID:17373385" /translation="MQRVYEPADLLEAEMLVGMLASEGIAAHVSGRHLVGAIGELPPG GLLALLVADEQTERARELILAYNAAAPLAEEPPEPCGPGSLLC" misc_feature complement(5204460..5204648) /locus_tag="PA4635a" /note="Putative prokaryotic signal transducing protein; Region: DUF2007; cl09659" /db_xref="CDD:471910" gene complement(5204648..5204830) /locus_tag="PA4636a" /db_xref="GeneID:17373335" CDS complement(5204648..5204830) /locus_tag="PA4636a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719780.1" /db_xref="GeneID:17373335" /translation="MLESQAYSCPYCGEPAEALLDLSAGDQQYYEDCPVCCRPILFDL RTDGQDWSLNVRREDD" misc_feature complement(5204666..5204812) /locus_tag="PA4636a" /note="Cysteine-rich CPXCG; Region: Cys_rich_CPXG; pfam14255" /db_xref="CDD:464116" gene 5204928..5206088 /locus_tag="PA4636" /db_xref="GeneID:881223" CDS 5204928..5206088 /locus_tag="PA4636" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253326.1" /db_xref="GeneID:881223" /translation="MMGEFEAIRPYSDAEVPAVLQRLLSDDAFLGALVRYRFPRLAGP LGWLLKPLIAHRLAREVTGIRSVATLQDKFEPYVDHTIEKATDGVTYSGVNRLKPGCA YLFIANHRDIVMDPAFVNYAVYHAGLPTPRIAIGDNLLQKSFVSDLMRLNKSFIVHRS LSGRREKLAAYQTLSAYINHSIREDRQSVWIAQAEGRAKDGDDRTDSAILKMFHMSRK DEPFAEMVRALHFIPVSISYEYDPCDLAKARELHTRASTGEYRKAPGEDDASIALGIT GYKGRVHINFGAELEGEFSDAKQLAAELDRQILGNYRLFPVHYLAYEMSENRDPGLAV PTAESLFGSEELEKARKEWNRRLEQCPAEQRSWLVLQYANPVLNQYRIKQQS" misc_feature 5205192..>5205650 /locus_tag="PA4636" /note="Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis; Region: LPLAT; cl17185" /db_xref="CDD:473073" misc_feature order(5205252..5205254,5205264..5205266,5205270..5205272, 5205330..5205341,5205513..5205521) /locus_tag="PA4636" /note="putative acyl-acceptor binding pocket [active]" /db_xref="CDD:153244" gene complement(5206209..5206487) /locus_tag="PA4637" /db_xref="GeneID:881224" CDS complement(5206209..5206487) /locus_tag="PA4637" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253327.1" /db_xref="GeneID:881224" /translation="MSLQALWALFLAHPAQAVNGLALFFGVAGAWLLLATRARERRAL ARWAAEGEAGEAALPMDEATLRINLFFYRFGTACLGLALLVSWASTRL" gene complement(5206720..5207007) /locus_tag="PA4637a" /db_xref="GeneID:881238" CDS complement(5206720..5207007) /locus_tag="PA4637a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719781.1" /db_xref="GeneID:881238" /translation="MPGFFMRSGNSGGLVERVRLADADAFVGLRQVEVFMAAGGAVHQ PAVVLDIEGKIDDHGLDLVQVVDQIVMFVGCGFQHDDSPVLSFAWVGFCDR" gene complement(5207035..5207622) /locus_tag="PA4639" /db_xref="GeneID:881239" CDS complement(5207035..5207622) /locus_tag="PA4639" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253329.1" /db_xref="GeneID:881239" /translation="MLHRLLLSLMTASALVLGGCALSPQQLDPQPVLKGPLTAVGHGQ PVVVKVVDGRPGPSLGTRGGLYADTSTLTVRSEDVVPKLQAQAETAVRLLGYTPSANA YNAPQLTLTLAELKYQSPKDGVYVTQADITATFRADVQNSSRRYTGRYGASLNQRFGM APNQATNSKLVSEVLSDALTRVFKDPTIAQTLGQQ" misc_feature complement(5207038..5207619) /locus_tag="PA4639" /note="Uncharacterized lipoprotein YajG [Function unknown]; Region: YajG; COG3056" /db_xref="CDD:442290" protein_bind 5207647..5207659 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4639" /bound_moiety="AmrZ" gene 5208464..5209987 /gene="mqoB" /locus_tag="PA4640" /db_xref="GeneID:881249" CDS 5208464..5209987 /gene="mqoB" /locus_tag="PA4640" /EC_number="1.1.5.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="malate:quinone oxidoreductase" /protein_id="NP_253330.1" /db_xref="GeneID:881249" /translation="MAQNDHETVDMLLVGAGIMSATLAVLLKELDPNLKMEVVELQES GAIESSNPWNNAGTGHAGLCELNYTPQSADGSIDIKKAVGINTMFEVSKQFWSHLVAK GTFGSPKTFINPVPHLSFVRGSEGIAYLKKRFESLTKHHAFETMVYSEDKATLAEWMP LMMPGRPADEAIAATRVEGGTDVNFGALTNQLLQHLAQQPGAQIRYNQKVTHLRRADN GWRVTVKDTRNGGDREIQARFVFLGAGGGALPLLQLSGIPEGKGFGGFPVSGQWLRCD NPEIVKQHQAKVYSQAEVGSPPMSVPHLDTRVVDGKKSLLFGPYAGFSTKFLRHGSFL DLPLSVRPGNILPMLSVARDNMDLTRYLIGQVMQSPEQRLEALRKFYPEARAEDWRLE VAGQRVQIIKKDPKKGGILQFGTELVAAHDGSIAALLGASPGASVTVSIMLGLIERCF PEQARSPEWSAKLKEIFPAREKELESDAELYRSVSSRCSEVLELTAKNDVQAPVNAE" misc_feature 5208470..5209960 /gene="mqoB" /locus_tag="PA4640" /note="malate:quinone oxidoreductase; Reviewed; Region: PRK13339" /db_xref="CDD:183983" gene complement(5210037..5210450) /locus_tag="PA4641" /note="'product name confidence: class 4 (homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences); this gene contains a frameshift that has been confirmed in the final sequence assembly. Contains high homology to Eschericha coli PhnB'" /pseudo /db_xref="GeneID:881250" gene complement(5210706..5210996) /locus_tag="PA4642" /db_xref="GeneID:881256" CDS complement(5210706..5210996) /locus_tag="PA4642" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253331.1" /db_xref="GeneID:881256" /translation="MRKDKKQIIGEEISDESIKLFLGVEPADDTPPSLHKLIKAYRGL RIDDFERFLTFFREAGYDLDARDAKGNDFVALVADQRQAAPYIEALQAAKGA" misc_feature complement(5210718..5210993) /locus_tag="PA4642" /note="PA4642 family protein; Region: gamma_NF038106" /db_xref="CDD:411685" gene complement(5211079..5211564) /locus_tag="PA4643" /db_xref="GeneID:881257" CDS complement(5211079..5211564) /locus_tag="PA4643" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253332.1" /db_xref="GeneID:881257" /translation="MFARSLCGSLLLFVSLAGLAAENPPMHARFLPPDDGQLRQEAPE QQQLIQITEYSVVLGNQRQSNQQPIPITTPTLLRLKGKPLSKGATLAQVLIQFDSEGK SLKKPVYDAGTRTLTLNYPLAQYPALLDLLRNQTVYCQFLAYPNGHVWADLHTGAVRA R" gene complement(5211632..5212105) /locus_tag="PA4644" /db_xref="GeneID:881265" CDS complement(5211632..5212105) /locus_tag="PA4644" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253333.1" /db_xref="GeneID:881265" /translation="MAGPRYLDQQLFAELASGAGNAPRGRQHHNFHRMEEPCHRMAVG LQPNTYIPPHRHLDAGKAEALIVLKGRLGLLVFAEDGELLDKRELSAAGDCPGVDLPP GVFHALVVLEPDSILFECKAGPYRPLGEGEFASWAPAEGSADAPAYRDWMRAQFA" misc_feature complement(5211692..5212087) /locus_tag="PA4644" /note="cupin fold metalloprotein, WbuC family; Region: cupin_WbuC; TIGR04366" /db_xref="CDD:275159" gene complement(5212107..5212664) /locus_tag="PA4645" /db_xref="GeneID:881266" CDS complement(5212107..5212664) /locus_tag="PA4645" /EC_number="2.4.2.8" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypoxanthine-guanine phosphoribosyltransferase" /protein_id="NP_253334.1" /db_xref="GeneID:881266" /translation="MSVDLAHIRQVRAEADCLFNNDEVEAAIGRVAEAINRDLGETNP VVFCVMNGGLIFSGKLLPLLDFPLELSYLHATRYRNETSGGELFWKAKPEISFIDRDV LIIDDILDEGHTLSAIIDFCKHAGARAVHTAVLVDKEHERKARPDLKASFTGLYCADR YVFGYGMDYKGYWRNAAGIFAVKGL" misc_feature complement(5212113..5212658) /locus_tag="PA4645" /note="hypoxanthine-guanine phosphoribosyltransferase; Provisional; Region: PRK09162" /db_xref="CDD:181675" misc_feature complement(order(5212251..5212253,5212323..5212337, 5212341..5212349,5212509..5212511,5212515..5212517)) /locus_tag="PA4645" /note="active site" /db_xref="CDD:206754" gene 5212833..5213471 /gene="upp" /locus_tag="PA4646" /db_xref="GeneID:881277" CDS 5212833..5213471 /gene="upp" /locus_tag="PA4646" /EC_number="2.4.2.9" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="uracil phosphoribosyltransferase" /protein_id="NP_253335.1" /db_xref="GeneID:881277" /translation="MPVHEIRHPLIRHKLGLMRRADISTKNFRELAQEVGALLTYEAT KDLPLEQYEIPGWAGPVTVEKISGKKITVVPILRAGIGMLDGVLSLIPGAKVSAVGVA RNEETLEARTYLEKLAPDIAERRSLIIDPMLATGGSMVATIDLLKKAGSKEIRAMVLV AAPEGIEAVRKAHPDVIIYTASIDEKLDENGYIIPGLGDAGDKIFGTKQKEA" misc_feature 5212833..5213456 /gene="upp" /locus_tag="PA4646" /note="uracil phosphoribosyltransferase; Reviewed; Region: upp; PRK00129" /db_xref="CDD:234653" misc_feature order(5213061..5213063,5213067..5213069,5213220..5213228, 5213232..5213246,5213316..5213318) /gene="upp" /locus_tag="PA4646" /note="active site" /db_xref="CDD:206754" gene 5213474..5214757 /gene="uraA" /locus_tag="PA4647" /db_xref="GeneID:881278" CDS 5213474..5214757 /gene="uraA" /locus_tag="PA4647" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="uracil permease" /protein_id="NP_253336.1" /db_xref="GeneID:881278" /translation="MGDAFQEPLWRQVLSGAQMLFVAFGALVLMPLITGLDPNVALFT AGLGTLLFQLVTGRQVPVFLASSFAFITPIILAKGQFGLAATMGGVVAAGFVYTFMGL AVKIKGTGFIDKLLPPVVIGPVIISIGLAMAPIAANMAMGKAGDGSELLPYRTAMMIS MPALLTTLVVAVFGKGIFRLVPIIAGVLVGFALSFVFGVVDTAAIVAAPWLELPKFTA PEFNWQAILFIVPVALAPAIEHIGGVIAVGGVTGQDYLKKPGLHRTLLGDGLATSAAG LFGGPPNTTYAEVTGAVMLTKNYNPKIMTWAAVIAITLAFVGKFGAILQSIPVPVMGG ILCLLFGTIASVGMNTLIRHKVDLSEARNLVIVSVTLVFGIGGVLIGSGTGPDDIGLK GIALCAIVAIVLNLLLPGNDGWQNKALDEQHKDSH" misc_feature 5213495..5214703 /gene="uraA" /locus_tag="PA4647" /note="Xanthine/uracil permease [Nucleotide transport and metabolism]; Region: UraA; COG2233" /db_xref="CDD:441834" gene 5215091..5215639 /locus_tag="PA4648" /db_xref="GeneID:881285" CDS 5215091..5215639 /locus_tag="PA4648" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253337.1" /db_xref="GeneID:881285" /translation="MNKRIPAVLLFCACASLLGTAQAAGTLIGQVGVQMVIGAGCTII NGSVSGGINQWGTLDFGSHSDLTNVVDAQTVGTSGNIQIQCSTGLTPSLTVNAGLHAS GGQRYMQNTTTTSSTIAYNIYSDAARSALIQANTPVDISSVSTGTAVNIPLYGRVVPT GQSTPTPTAGTYTDTLLVTIAW" misc_feature 5215109..5215636 /locus_tag="PA4648" /note="Fimbrial subunit ScuA/B, ScuA/B/SCPU domain [Extracellular structures]; Region: SCPU; COG5430" /db_xref="CDD:444182" gene 5215670..5216203 /locus_tag="PA4649" /db_xref="GeneID:881286" CDS 5215670..5216203 /locus_tag="PA4649" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253338.1" /db_xref="GeneID:881286" /translation="MVLGGPMSLNRYFTGGLLCLLGCNPANAQTATIVLSATLLPACE AGSVGSGGAITFGTLDFGQYASLNNAISATSQQGAGSIRVRCVSGQTYAITLDGGLYG SVATRRMANIANTALTLTYNLYSDRPGGIVWDNTTGVAATGNGNDQWYPIYGLVPAQT TPVAGTYRDTVNVTISW" misc_feature 5215718..5216200 /locus_tag="PA4649" /note="Fimbrial subunit ScuA/B, ScuA/B/SCPU domain [Extracellular structures]; Region: SCPU; COG5430" /db_xref="CDD:444182" gene 5216203..5216745 /locus_tag="PA4650" /db_xref="GeneID:881294" CDS 5216203..5216745 /locus_tag="PA4650" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253339.1" /db_xref="GeneID:881294" /translation="MPMSSRRLFLSLLLLPLPNLVAHADPSPISRAFQVQAVVANGCA FGTAISNNAYDLGTLSFGTLGNLASPVNVASSSGAGSIVLTCTPGMTVSVALDYGVNG GSSSQRYLKRVSGNETLAYQLYQDAAYSQVWGNGALARTIANFPASTQTYTVYARLFA VGSLPSAGNYRDTVTVTLSF" misc_feature 5216263..5216742 /locus_tag="PA4650" /note="Fimbrial subunit ScuA/B, ScuA/B/SCPU domain [Extracellular structures]; Region: SCPU; COG5430" /db_xref="CDD:444182" gene 5216764..5217552 /locus_tag="PA4651" /db_xref="GeneID:881295" CDS 5216764..5217552 /locus_tag="PA4651" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="pili assembly chaperone" /protein_id="NP_253340.1" /db_xref="GeneID:881295" /translation="MPSPHLPLRPSRWLAALLALLLGGPAQAASAVLIWPINPAIEAD QPATALWLENRGKQPVTLQVRVLGWSQADFQDVYRNQQAVIPSPPFVKVEPGRRQLVR LIRQGGQPSTPEDAYRVLIDEVPDGDAGQTQRSPGLALQFQMRYSVPLFVSADGVWTQ PRSDVERDPADATRPKLAWRLVEEQGKRYLQVRNEGSVHARLSHVRWEGNGRSLALLD GLLGYVLPGRQMRWPLPPGLLPDSGMTLKLQLADNDAPISVPGY" misc_feature 5216836..5217519 /locus_tag="PA4651" /note="P pilus assembly protein, chaperone PapD [Extracellular structures]; Region: FimC; COG3121" /db_xref="CDD:442355" gene 5217569..5219941 /locus_tag="PA4652" /db_xref="GeneID:881301" CDS 5217569..5219941 /locus_tag="PA4652" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253341.1" /db_xref="GeneID:881301" /translation="MPRPCQRRSRRHRSLLIGLALLSPVHAADYLAGLPPPQPAPSGG GNVLYYLELVINGRDSGQVVPVNAADGHYLLDAAALREAGVRLPGNPAGQVAVDALPE VRADYDSASQQLHLQVPPDWLPEQRFDDPGLVARAPARSSLGALFNYDLYYSDPADGA TPWLSALLEQRLFDGFGVISNTGVYTRYFGDADNLDSRYLRYDTYWLYNDERNMHSYQ LGDYVNGALNWTTPVRMGGFRFARNFGVRPDLVTYPLLRFDGQAAVPSTVDLFINGYK ASSADLQPGPFAISNVPYINGAGEATVVTTDAQGRQVVTSLPFYVSNTLLARGLSDFD LSVGRLRDDYGLRNFSYADNAASGIYRYGVSDRLTLSTHAEAASDLRLLGIGGDIAVA TFGTLSLAASGSDGQGDSGQQYLLGYSYYSRRLGLSLQHIERSAGYGDLGTLDGEYQL SRRTDQATASLTFDEQGTIGTGYFDIRARDGSRTRLANLSYSRPIGSRSSFYLALNKD LDGDGYSALMQLVIPFDINGLLNIGVTRDSDRRYSERVIWSRSTPSQGGLGWNLGYGG GASRYQQADLTWRMQNVQLQGGLYGETGNYTRWADLSGSLVWMDNAVFASNRINDAFV LVSTKGYPQVPIRYENQLMGSTDDNGHLLVPWVAAYYPAKFQIEPLDLPANVSAPEVE QRVAVRQGSGLLLDFPIRAVVAASISLVDERGEPLPLGSQAEETGSGQRASVGWDGQV YFEGLQSDNQLRVVRPDGRACQARFRLDTRKPTVSQVGPLTCSAPIGDTP" misc_feature 5217713..5219914 /locus_tag="PA4652" /note="Outer membrane usher protein FimD/PapC [Cell motility, Extracellular structures]; Region: FimD; COG3188" /db_xref="CDD:442421" gene 5219938..5220885 /locus_tag="PA4653" /db_xref="GeneID:881302" CDS 5219938..5220885 /locus_tag="PA4653" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253342.1" /db_xref="GeneID:881302" /translation="MSRHSTSACLLGFATLCASPLLLAACTTSSGTGNFGSLSSFTVA STAQTITGTTGFKCTGSLLSILSTNTIDATIASTANPLGTTPRLYNAASGTYLPYSIC KDNGCGTVYNVGSTVRWSSTTFLGILGLFNATDGSLPLYLRTATGVTLPAGTYTDTIG LNWAWHLCAAGIGPVCVYDDGTASSSVNVTLTVLKDCFIDSAPDLSFGSAALVSAFTA VNQNIGVRCTLNATYTIGFDNGNNFSGGWRRMLSGANAIQYNLYKPGDSTVWTTSNTQ AGTGSGAAQNVPYRAIVNPAQGNVPAGTYSDTVRVILTY" misc_feature 5219977..5220414 /locus_tag="PA4653" /note="Spore Coat Protein U domain; Region: SCPU; pfam05229" /db_xref="CDD:428381" misc_feature 5220436..5220882 /locus_tag="PA4653" /note="Fimbrial subunit ScuA/B, ScuA/B/SCPU domain [Extracellular structures]; Region: SCPU; COG5430" /db_xref="CDD:444182" gene complement(5220887..5222260) /locus_tag="PA4654" /db_xref="GeneID:881310" CDS complement(5220887..5222260) /locus_tag="PA4654" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_253343.1" /db_xref="GeneID:881310" /translation="MHNNNNGYPSNLAAWTTVAILMVAYVLSFIDRQILNLLVGPIRR DLAISDTEMSLLMGLSFALFYTLCGIPLGRMADNRSRRGLILFGVLVWSAMTAACGLA RSYWQFLTFRVGVGVGEAALSPAAYSLIADSFPRERRATAISVYSMGIYLGSGLAFLL GGLVIKFASAQGDVHLPLFGEVRPWQLIFLILGAAGVLFCLLLLAIREPARRGVGAGV AVPLGEVGAYLRANRKTVLCHNFGFACLSFAGYGSGAWVPTFFVRTHGWDAGHVGVVY GSIVAVFGCLGIVFGGRLADYWAKRGRSDANMRVGLLAAWAVIPFTLVYPLLDNANWA AALMAPTVFFLSMPFGVAPAAIQEIMPNSMRGQASAIYLFVVTLFGLGVGPTAVALVT DFVFADDMALRYSLLLVTLAAVLGAVVLLGIGLKPYRASLEHLKDWSLRREGEGGEDW KASRQPA" misc_feature complement(5220998..5222209) /locus_tag="PA4654" /note="Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; Region: MFS_spinster_like; cd17328" /db_xref="CDD:340886" misc_feature complement(order(5221121..5221123,5221130..5221135, 5221142..5221147,5221154..5221156,5221214..5221216, 5221226..5221228,5221238..5221243,5221397..5221399, 5221409..5221411,5221496..5221498,5221505..5221513, 5221520..5221525,5221532..5221534,5221799..5221801, 5221808..5221813,5221820..5221822,5221880..5221882, 5221889..5221897,5221901..5221906,5222054..5222056, 5222153..5222155,5222162..5222167,5222174..5222179)) /locus_tag="PA4654" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340886" gene complement(5222540..5223562) /gene="hemH" /locus_tag="PA4655" /db_xref="GeneID:881311" CDS complement(5222540..5223562) /gene="hemH" /locus_tag="PA4655" /EC_number="4.99.1.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ferrochelatase" /protein_id="NP_253344.1" /db_xref="GeneID:881311" /translation="MTENALLLLNLGSPDSTRVEDVRRYLDQFLMDPYVVDLPWPLRR LLVSLILIKRPAESAHAYSSIWWDEGSPLIVLSRRLQEAMKPHWPHGPVELAMRYGQP AIEKVLLDLARRGIRRVTLAPLYPQFADSTTTTAEQEVRRVIAAHRLGLEVSTLPPFY DQPVYLDALVESVRPYLQQPHDHLLLSFHGLPERHIRKLVKDPAHDLLAENSRNVSPE ALALCYRSQCLRTAEAFAERAGLEQGRWSVSFQSRLGRAKWIEPYTDAKLDELVQRGV KRLLVMCPAFVADCIETLEEIGMRGREQFISAGGEDLVLIPCLNDHPAWVGALAEMSG RLARPL" misc_feature complement(5222567..5223562) /gene="hemH" /locus_tag="PA4655" /note="ferrochelatase; Reviewed; Region: hemH; PRK00035" /db_xref="CDD:234585" gene complement(5223559..5224476) /locus_tag="PA4656" /db_xref="GeneID:881319" CDS complement(5223559..5224476) /locus_tag="PA4656" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253345.1" /db_xref="GeneID:881319" /translation="MHILLTGGTGLMGRRLCARWRQAGHRLTVFSRRPQQVESLCGVG VRGIDRFDEYGDQPLDAVVNLAGEPIADKPWSHKRKALLWESRVRLTERLVEWLDARE QRPDLLLSGSAVGWYGDSGERPVTEEGAAAGEDFASELCLAWEQIAREAEKLGTRVVL LRTGLVLAPEGGFLGRLLPLYRLGLGGPLGDGRQWMPWIHIEDQIELIDFLLRRPDAS GPYNACAPNPVRNRDFAKALGRALHKPARIPTPGFVLRLGLGEMSGLLLGGQRALPQR LQDAGYRFQFTDLDVALADVLDARRKDQA" misc_feature complement(5223598..5224470) /locus_tag="PA4656" /note="TIGR01777 family protein; Region: yfcH" /db_xref="CDD:273800" gene 5224890..5225873 /locus_tag="PA4657" /db_xref="GeneID:881328" CDS 5224890..5225873 /locus_tag="PA4657" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253346.1" /db_xref="GeneID:881328" /translation="MSVPIAIIGTGIAGLSAAHALRSAGQTVQLFDKGHGSGGRMASK RSEAGTLDLGAQYFTARDRRFLDALQHWREEGWVDEWKPALYQYRDGQLSPSPDEQPR WVGIPRMSAITRALLTDLQVVFSCRITEVFRGKQHWHLQDSEGQNHGPFNQVLIAIPA PQATPLLASVPKLAATAASVVMEPTWAVALGFREVLDTPVQGCFVHGSPIAWLACNRS KPGRDTTLDTWVLHATSQWSRQHIDMAKEDVVEHLRCAFAEVIGCAVPEAAFSIAHRW LYARPAEAHQWGALGDPDLGIYACGDWCSSGRVEGAWLSGQEAARRLLEHL" misc_feature 5224890..5225870 /locus_tag="PA4657" /note="Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]; Region: COG3380" /db_xref="CDD:442607" gene 5226026..5226982 /locus_tag="PA4658" /db_xref="GeneID:881329" CDS 5226026..5226982 /locus_tag="PA4658" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253347.1" /db_xref="GeneID:881329" /translation="MHESHPSLTPRLGISACLLGEPVRFNGGHKRSALCEELARHVEF VSFCPEQAIGLGTPRPAIRLEGTPEAAEARSRDGLAVGGALAEYARRVAQRADTLDGF IFMQRSPSCGLQRVKVYPEGGGAPRAEGRGRFAAALCEALPELPVEEEGRLHDPVLRE NFLTRVYAHAHWQALRQRGLSHSAIVAFHSRYKYQLLAHSPEHYRSLGRLLGEAGHYQ PEALGTRYFGELMQGLRRCATRGSHGNVLLHLSGYLKRDLATEDRRELRELIEQYRHG SVPLVVPLTLLKHHFRRHPHAYIAQQAYLQPHPTELGLRNAL" misc_feature 5226053..5226493 /locus_tag="PA4658" /note="Uncharacterized conserved protein YbbK, DUF523 family [Function unknown]; Region: YbbK; COG1683" /db_xref="CDD:441289" misc_feature 5226275..5226970 /locus_tag="PA4658" /note="Uncharacterized conserved protein YbgA, DUF1722 family [Function unknown]; Region: YbgA; COG3272" /db_xref="CDD:442503" gene 5226992..5227891 /locus_tag="PA4659" /db_xref="GeneID:881336" CDS 5226992..5227891 /locus_tag="PA4659" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253348.1" /db_xref="GeneID:881336" /translation="MNSPHLERGGLPIREVTRLTGVHPVTLRAWERRYGLVVPQRTGK GHRLYSEEQVERIRRILVWLERGVAISQVRALLERPEETPAADVESPWERLHEQLLDA IAALAERRLDDLFNQAASLYPVATLCEKLLQPLLQHLERRWQGQFGARMERAFFFSWL RSKLGARLYHQQRLQQGAPLLLVNQSELSLEPNLWLCSWLLGSGEVPLQVFDWPLPPA ELALACERLEARGVLLYASHRLNPEHLPRLLAGVSCPVVLVGPAVEIQREAFETLALT GLLLASTPLEARRLLGERGLLNP" misc_feature 5227022..5227225 /locus_tag="PA4659" /note="Helix-Turn-Helix DNA binding domain of the transcription regulators MlrA and CarA; Region: HTH_MlrA-CarA; cd01104" /db_xref="CDD:133379" misc_feature order(5227025..5227033,5227073..5227075,5227124..5227132) /locus_tag="PA4659" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133379" misc_feature 5227028..>5227429 /locus_tag="PA4659" /note="HTH-type transcriptional regulator MlrA; Region: PRK15043" /db_xref="CDD:185003" gene 5227888..5229333 /gene="phr" /locus_tag="PA4660" /db_xref="GeneID:881337" CDS 5227888..5229333 /gene="phr" /locus_tag="PA4660" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="deoxyribodipyrimidine photolyase" /protein_id="NP_253349.1" /db_xref="GeneID:881337" /translation="MNGLPMNLIWFRCDLRTTDNSALLAAADGRPCLALYLLSPAQWR EHDDAPCKVDFWLRNLGELQRQLAALNIPLLVRDCGHWRQAPEVIGRLCRELGVGAVH VNQEYGVNEERRDQAVGQRLREQGVAFHSHLDQLFFAPGSVLTRTGGYFQVFSQFRKV CHERLYQALPGVRPRPQPQPPHALASDPLPDAVPAFPRPADSLRRLWPAGEEVAQERL RDFADQHLADYHERRDFPALPGTSQLSPYLAAGVLSPRQCLDAALVANRGEFSGGQQG AATWINELLWREFYKHILVGYPRVSRHRPFREETEALRWRQAPAELEAWQQGRTGIPI IDAAMRQLLATGWMHNRLRMVVAMFLSKNLLIDWREGERWFMRHLIDGDLAANNGGWQ WSASTGTDAVPYFRLFNPLSQSERFDPRGEFIRHWLPELAGLERKAIHDPSSLGLFAG VDYPRPMVDLKASRERALAAFRNLPPRDGRA" misc_feature 5227900..5229309 /gene="phr" /locus_tag="PA4660" /note="Deoxyribodipyrimidine photolyase [Replication, recombination and repair]; Region: PhrB; COG0415" /db_xref="CDD:440184" gene complement(5229459..5229980) /gene="pagL" /locus_tag="PA4661" /db_xref="GeneID:881344" CDS complement(5229459..5229980) /gene="pagL" /locus_tag="PA4661" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="lipid A 3-O-deacylase" /protein_id="NP_253350.1" /db_xref="GeneID:881344" /translation="MKKLLPLAVLAALSSVHVASAQAADVSAAVGATGQSGMTYRLGL SWDWDKSWWQTSTGRLTGYWDAGYTYWEGGDEGAGKHSLSFAPVFVYEFAGDSIKPFI EAGIGVAAFSGTRVGDQNLGSSLNFEDRIGAGLKFANGQSVGVRAIHYSNAGLKQPND GIESYSLFYKIPI" misc_feature complement(5229474..5229869) /gene="pagL" /locus_tag="PA4661" /note="Lipid A 3-O-deacylase (PagL); Region: PagL; pfam09411" /db_xref="CDD:462791" gene complement(5230114..5230911) /gene="murI" /locus_tag="PA4662" /db_xref="GeneID:881345" CDS complement(5230114..5230911) /gene="murI" /locus_tag="PA4662" /EC_number="5.1.1.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutamate racemase" /protein_id="NP_253351.1" /db_xref="GeneID:881345" /translation="MAVESAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPY GEKSAEYIRERCERIGDFLLEQGAKALVLACNTATAAAAAELRERYPQVPLVAMEPAV KPAAAATRNGRVGVLATTGTLKSARFAALLDRFASDVQVFTQPCPGLVERIEAGDLYG PQTRALLERLLAPILEQGCDTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLE RVLSARALLASGQAATPRFWTSALPEEMERILPILWGSPESVGKLVV" misc_feature complement(5230132..5230911) /gene="murI" /locus_tag="PA4662" /note="glutamate racemase; Provisional; Region: PRK00865" /db_xref="CDD:234851" gene complement(5230901..5231659) /gene="moeB" /locus_tag="PA4663" /db_xref="GeneID:881352" CDS complement(5230901..5231659) /gene="moeB" /locus_tag="PA4663" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein MoeB" /protein_id="NP_253352.1" /db_xref="GeneID:881352" /translation="MLSDEELLRYSRQILLAQVDVEGQLRLKRSRALIVGLGGLGSPV ALYLAAAGVGELHLADFDTVDLTNLQRQVIHDGASVGIGKVESAMRRLGALNPQIRLV SHSAALDEDSLDAAVAAVDLVLDCTDNFATREAVNVACVRAGKPLVSGAAIRLEGQLS VFDTRRDESPCYHCLYGHGSEAELTCSEAGVIGPLVGLVGSLQALEALKLLAGFGEPL VGRLLLVDALGTRFRELRVRRDPSCAVCGQRHGG" misc_feature complement(5230931..5231659) /gene="moeB" /locus_tag="PA4663" /note="molybdopterin biosynthesis protein MoeB; Provisional; Region: PRK05690" /db_xref="CDD:180204" gene complement(5231653..5232483) /gene="hemK" /locus_tag="PA4664" /db_xref="GeneID:881353" CDS complement(5231653..5232483) /gene="hemK" /locus_tag="PA4664" /EC_number="2.1.1.-" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="methyl transferase" /protein_id="NP_253353.1" /db_xref="GeneID:881353" /translation="MTTICTLLKDSQLPDSPSARLDTELLLAAAMGKPRSFLRTWPER IVPREANERFDDWIARRRNGEPVAYILGHQGFWSLDLEVAPHTLIPRPDTELLVETAL ATLAADTATVLDLGTGTGAIALALASERPLWTVTAVDRVEEAVALAERNRQRLLLENV EVRRSHWFSALDGRRFRMIVGNPPYIPASDPHLSEGDVRFEPKSALVAGSDGLDDIRQ IVAQAPRHLLDEGWLLLEHGYDQGAAVRELLGARGFAGVHTLRDLGGNERITLGQWAC " misc_feature complement(5231662..5232483) /gene="hemK" /locus_tag="PA4664" /note="N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional; Region: PRK09328" /db_xref="CDD:236467" misc_feature complement(order(5231938..5231940,5231983..5231991, 5232064..5232069,5232121..5232141)) /gene="hemK" /locus_tag="PA4664" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(5232485..5233567) /gene="prfA" /locus_tag="PA4665" /db_xref="GeneID:881360" CDS complement(5232485..5233567) /gene="prfA" /locus_tag="PA4665" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="peptide chain release factor 1" /protein_id="NP_253354.1" /db_xref="GeneID:881360" /translation="MKASLLKKLDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAE VEPVILAFRDYRKVQADLEGAQALLKDSDPELRDLAEEEVAEARGRLAALGDSLQRML LPKDPNDSRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERQGWRIETLSENEGEHGG YKEVIARVEGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIE INPADLRVDTYRSSGAGGQHVNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWL AAKLNDQQQAAAQQAIASTRKLLVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLGEV MEGAVEQVIEPLLQEYQADQLAALGD" misc_feature complement(5232491..5233558) /gene="prfA" /locus_tag="PA4665" /note="Protein chain release factor RF1 [Translation, ribosomal structure and biogenesis]; Region: PrfA; COG0216" /db_xref="CDD:439986" gene complement(5233585..5234853) /gene="hemA" /locus_tag="PA4666" /db_xref="GeneID:881361" CDS complement(5233585..5234853) /gene="hemA" /locus_tag="PA4666" /EC_number="1.2.1.70" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA reductase" /protein_id="NP_253355.1" /db_xref="GeneID:881361" /translation="MAFIALGINHKTASVAVRERVAFTPEQMVEALQQLCRLTTSREA AILSTCNRSELYLEIDHPTADDVLAWLADYHRLTLDELRACAYVHQDEDAVRHMMRVA SGLDSMVLGEPQILGQMKSAYAVAREAGTVGPLLGRLFQATFSTAKTVRTDTAIGENP VSVAFAAVSLAKQIFSDLHRSQALLIGAGETITLVARHLFEQGVKRIVVANRTLERAS LLAEQFGAHAVLLSEIPEELANSDIVISSTASQLPILGKGAVERALKQRKHKPMFMVD IAVPRDIEPEVGELDDVYLYSVDDLHEVVAENLKSRQGAAQAAEELVGSGVAEFMQRL RELAAVDVLRAYRQQAERLRDEELGKAQRQLANGADPAEVMAQLARGLTNKLLHAPSV QMKKMSAEGRIDALALAQELFALDEGAPRH" misc_feature complement(5233591..5234853) /gene="hemA" /locus_tag="PA4666" /note="glutamyl-tRNA reductase; Reviewed; Region: hemA; PRK00045" /db_xref="CDD:234592" gene 5234997..5236769 /locus_tag="PA4667" /db_xref="GeneID:881370" CDS 5234997..5236769 /locus_tag="PA4667" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253356.1" /db_xref="GeneID:881370" /translation="MMAPPSQVQGRLSSSMNKSLALLTVTLLLGGCQSLIHKTPDGTP PVEDTAVETKAKPEKYGSFSEDSLYSLLVAELAGQRNRFDIALSNYVVQAQKTRDPGV SERAFRIAEYLGADQEALDTSLLWARSAPDNLDAQRAAAIQLARAGRYEESMVYMEKV LNGQGDTHFDFLALSAAETDPDTRAGLLQSFDHLLKKYPNNGQLLFGKALLLQQDGRP DEALTLLEDNSASRHEVAPLLLRSRLLQSMKRSDEALPLLKAGIKEHPDDKRVRLAYA RLLVEQNRLDDAKAEFAGLVQQFPDDDDLRFSLALVCLEAQAWDEARIYLEELVERDS HVDAAHFNLGRLAEEQKDTARALDEYAQVGPGNDFLPAQLRQTDVLLKAGRVDEAAQR LDKARSEQPDYAIQLYLIEAEALSNNDQQEKAWQAIQEGLKQYPEDLNLLYTRSMLAE KRNDLAQMEKDLRFVIAREPDNAMALNALGYTLADRTTRYGEARELILKAHKLNPDDP AILDSMGWINYRQGKLADAERYLRQALQRYPDHEVAAHLGEVLWAQGRQGDARAIWRE YLDKQPDSDVLRRTIKRLTGAETP" misc_feature <5235216..5235791 /locus_tag="PA4667" /note="Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis]; Region: LapB; COG2956" /db_xref="CDD:442196" misc_feature <5235561..5236682 /locus_tag="PA4667" /note="putative PEP-CTERM system TPR-repeat lipoprotein; Region: PEP_TPR_lipo; TIGR02917" /db_xref="CDD:274350" misc_feature order(5235804..5235806,5235813..5235818,5235825..5235830, 5235834..5235836,5235906..5235908,5235915..5235920, 5235927..5235932,5235936..5235941,5236008..5236010, 5236017..5236022,5236029..5236034,5236041..5236043) /locus_tag="PA4667" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature 5235804..5235887 /locus_tag="PA4667" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 5235900..5235992 /locus_tag="PA4667" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 5236005..5236085 /locus_tag="PA4667" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 5236104..5236184 /locus_tag="PA4667" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 5236209..5236295 /locus_tag="PA4667" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 5236308..5236400 /locus_tag="PA4667" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 5236413..5236502 /locus_tag="PA4667" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature order(5236416..5236418,5236425..5236430,5236437..5236442, 5236446..5236448,5236521..5236523,5236530..5236535, 5236542..5236547,5236551..5236556,5236623..5236625, 5236629..5236634,5236641..5236646,5236653..5236655) /locus_tag="PA4667" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature 5236515..5236607 /locus_tag="PA4667" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 5236620..5236703 /locus_tag="PA4667" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" gene 5236774..5237391 /locus_tag="PA4668" /db_xref="GeneID:881371" CDS 5236774..5237391 /locus_tag="PA4668" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="molecular chaperone LolB" /protein_id="NP_253357.1" /db_xref="GeneID:881371" /translation="MRLRLFLAASALALLSGCAGLTSHEALEGQGDAQTWKTHKQQLS ELDAWQIDGKVGIRAPRDSGSGTLFWLQRQGYYDIRLSGPLGRGAARLTGREGAVSLE VAGQGRYQAESPEALLEEQLGWRLPVSHLLWWVRGLPAPDSKSRLTLDADSRLARLEQ DGWQIEYTRYAEQNGYWLPERLKLHGQDLDVTLVIKDWQPRQLGR" misc_feature 5236777..5237373 /locus_tag="PA4668" /note="family containing periplasmic molecular chaperone LolA, the outer membrane lipoprotein receptor LolB and the periplasmic protein RseB; Region: LolA_fold-like; cl19192" /db_xref="CDD:473147" misc_feature order(5236924..5236926,5236930..5236932,5236936..5236938, 5236942..5236944,5236969..5236971,5236975..5236977, 5236981..5236983,5237008..5237010,5237014..5237016, 5237041..5237043,5237047..5237049,5237068..5237070, 5237074..5237076,5237245..5237247,5237266..5237268, 5237272..5237274,5237308..5237310,5237317..5237319, 5237323..5237325,5237344..5237346,5237350..5237352, 5237356..5237358,5237365..5237367) /locus_tag="PA4668" /note="hydrophobic core; other site" /db_xref="CDD:319984" misc_feature 5237026..5237028 /locus_tag="PA4668" /note="lipid binding site [chemical binding]; lipid-binding site" /db_xref="CDD:319984" gene 5237393..5238241 /gene="ipk" /locus_tag="PA4669" /db_xref="GeneID:881380" CDS 5237393..5238241 /gene="ipk" /locus_tag="PA4669" /EC_number="2.7.1.148" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="4-diphosphocytidyl-2C-methyl-D-erythritol kinase" /protein_id="NP_253358.1" /db_xref="GeneID:881380" /translation="MSVRLSLPAPAKLNLFLHILGRRDDGYHELQTLFQFLDHGDELH FEARQDGQVRLHTEIAGVPHDSNLIVRAARGLQEASGSPQGVDIWLDKRLPMGGGIGG GSSDAATTLLALNHLWQLGWDEDRIAALGLRLGADVPVFTRGRAAFAEGVGEKLTPVD IPEPWYLVVVPQVLVSTAEIFSDPLLTRDSPAIKVRTVLEGDSRNDCQPVVERRYPEV RNALILLNKFVSARLTGTGGCVFGSFPNKAEADKVSALLPDHLQRFVAKGSNISMLHR KLETLV" misc_feature 5237402..5238202 /gene="ipk" /locus_tag="PA4669" /note="4-diphosphocytidyl-2C-methyl-D-erythritol kinase [Lipid transport and metabolism]; Region: IspE; COG1947" /db_xref="CDD:441550" gene 5238277..5238351 /locus_tag="PA4669.1" /db_xref="GeneID:3240207" tRNA 5238277..5238351 /locus_tag="PA4669.1" /product="tRNA-Gln" /db_xref="GeneID:3240207" gene 5238408..5239349 /gene="prs" /locus_tag="PA4670" /db_xref="GeneID:881387" CDS 5238408..5239349 /gene="prs" /locus_tag="PA4670" /EC_number="2.7.6.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribose-phosphate pyrophosphokinase" /protein_id="NP_253359.1" /db_xref="GeneID:881387" /translation="MSKMMVFTGNANPDLARRVVRQLHIPLGDVSVGKFSDGEISVEI NENVRGKDVFLIQPTCAPTNDNLMELVVMADAFRRSSATRITAVIPYFGYARQDRRPR SARVAISAKVVADMLTVVGVNRVLTVDLHADQIQGFFDIPVDNIYGSPVLVDDIEDQR FENLMIVSPDIGGVVRARAVAKSLGVDLAIIDKRRPKANQSEVMHIIGDVEGRTCVLV DDMVDTAGTLGHAAKALKEHGAAKVIAYCTHPVLSGRAIENIEKSVLDELVVTNTIPL SAAAQACGRIRQLDIAPVVAEAMRRISNEESISAMFR" misc_feature 5238417..5239346 /gene="prs" /locus_tag="PA4670" /note="ribose-phosphate diphosphokinase; Region: PRK01259" /db_xref="CDD:234929" gene 5239466..5240080 /locus_tag="PA4671" /db_xref="GeneID:881395" CDS 5239466..5240080 /locus_tag="PA4671" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L25/general stress protein Ctc" /protein_id="NP_253360.1" /db_xref="GeneID:881395" /translation="MVDFILNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVT LELREIAKLLENEAAFSHVIALNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHK LTAHVPLHFINEEVAVGVKQAGGEISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIV HLSDLKAPKGVELVQLAHGNDLAVANIHASRVVKEEGSEEGAAE" misc_feature 5239466..5240047 /locus_tag="PA4671" /note="50S ribosomal protein L25/general stress protein Ctc; Reviewed; Region: PRK05618" /db_xref="CDD:235534" gene 5240122..5240706 /locus_tag="PA4672" /db_xref="GeneID:881396" CDS 5240122..5240706 /locus_tag="PA4672" /EC_number="3.1.1.29" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="peptidyl-tRNA hydrolase" /protein_id="NP_253361.1" /db_xref="GeneID:881396" /translation="MTAVQLIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSLVADR KYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALAGFFRIAPDAILVAHDELDMPPG VAKLKTGGGHGGHNGLRDIIAQLGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQ ELLDTSIDFALGVLPEMLAGDWTRAMQKLHSQKA" misc_feature 5240134..5240694 /locus_tag="PA4672" /note="Peptidyl-tRNA hydrolase [Translation, ribosomal structure and biogenesis]; Region: Pth; COG0193" /db_xref="CDD:439963" gene 5240747..5241847 /locus_tag="PA4673" /db_xref="GeneID:881404" CDS 5240747..5241847 /locus_tag="PA4673" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="GTP-dependent nucleic acid-binding protein EngD" /protein_id="NP_253362.1" /db_xref="GeneID:881404" /translation="MGFNCGIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIV PMPDARLNALAEIVKPERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAH VVRCFEDDNVIHVSNSVDPKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKEALA QKALLEKLIPHFTEGKPARSLLKNLGDEEKRLVRSFHLLTSKPVMYIANVAEDGFENN PHLDVVKAIAEEEGAVVVPVCNKIEAEIAELEDGEEKDMFLESLGLEEPGLNRVIRAG YGLLNLQTYFTAGVKEVRAWTVRVGATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFK GEQGAKEAGKWRLEGKDYIVKDGDVMHFRFNV" misc_feature 5240753..5241844 /locus_tag="PA4673" /note="Ribosome-binding ATPase YchF, GTP1/OBG family [Translation, ribosomal structure and biogenesis]; Region: GTP1; COG0012" /db_xref="CDD:439783" gene 5242026..5242102 /locus_tag="PA4673.1" /db_xref="GeneID:3240208" tRNA 5242026..5242102 /locus_tag="PA4673.1" /product="tRNA-Met" /db_xref="GeneID:3240208" gene complement(5242254..5242559) /locus_tag="PA4674" /db_xref="GeneID:881405" CDS complement(5242254..5242559) /locus_tag="PA4674" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253363.1" /db_xref="GeneID:881405" /translation="MATNGMRPIHPGEILRDEFLMEFDISPAALARALKVSAPTVNDI VREQRGISADMAIRLGRYFDTSAQFWMNLQSEYSLATAYAANGKQIEHEIEPLLAHG" misc_feature complement(5242314..5242553) /locus_tag="PA4674" /note="Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain [Defense mechanisms]; Region: VapI; COG3093" /db_xref="CDD:442327" gene 5243178..5245406 /locus_tag="PA4675" /db_xref="GeneID:881415" CDS 5243178..5245406 /locus_tag="PA4675" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="TonB-dependent receptor" /protein_id="NP_253364.1" /db_xref="GeneID:881415" /translation="MPRSIPLRPAPLALSLSLFASFSAPALAADPVEQQMVVIGSRAP TSISELPGTVWVIEREQLDQQTQAGVPLKEALGQLIPGLDIGSQGRTNNGQNLRGRSV LVMIDGVSLNSSRGISRQFDSIDPFNIERIEVMSGASAVYGGGATGGIINIVTKKGVG GDTRFNTELGARSGFQSHEDHDLRAAQSISGGNDLFNGRLAIAYQKNGAAYDGSGDQV LTDITQTDLQYNRSVDLMGSLGFTFANGHSLDLGLQYYDSGYDGDRGLDLGRNFDALR GRAPYSIKGGVDLDREPESKRHQFNATYHAPEVLGHDLYLQAYYRNEKMAFNPFPTIR YSNTGAINYGTSYYSASQQDTDYYGMKLALVKTWERASLTYGVDLDREKFTSDQMLFN LPLAAASGGLVASEQAKLGRYPDIDTDSRAFFLQGSWKATDDLTLSAGVRRQSMSTDV SDFVAANQQILIANGLGKTADAVPGGSKDYDVNLVNVGAIYKLNLQQQVWANYSEGFE LPDPAKYYGFGRYGAADGNGHYPLLQGVSVNDSPLDGIKTKQVELGWRHTDGALDTQV AAFYSWSDKSIKYDSKTLAVLQQDTKKRNYGLEGQATYWLDDHWQVGVNGLAIRSQEK VDGRWLKQDVTSASPSKAGAFVGWKDDQRSLRLQGVRTFNLNDEPGNKIDGYALFDLL GTQALPVGTLTAGIQNLLDKDYTTVWGQRAQVYYGGLAPAGLFDYKGRGRTYSLTYSV EF" misc_feature 5243334..5245403 /locus_tag="PA4675" /note="TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel; Region: ligand_gated_channel; cd01347" /db_xref="CDD:238657" misc_feature order(5243334..5243363,5243400..5243429,5243460..5243477, 5243487..5243510,5243553..5243585,5243616..5243642) /locus_tag="PA4675" /note="N-terminal plug [active]" /db_xref="CDD:238657" misc_feature order(5244150..5244152,5244234..5244236) /locus_tag="PA4675" /note="ligand-binding site [chemical binding]; other site" /db_xref="CDD:238657" gene complement(5245476..5246123) /locus_tag="PA4676" /db_xref="GeneID:881416" CDS complement(5245476..5246123) /locus_tag="PA4676" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="carbonic anhydrase" /protein_id="NP_253365.1" /db_xref="GeneID:881416" /translation="MSDLQQLFENNVRWAEAIKQEDPDFFAKLARQQTPEYLWIGCSD ARVPANEIVGMLPGDLFVHRNVANVVLHTDLNCLSVIQFAVDVLKVKHILVTGHYGCG GVRASLHNDQLGLIDGWLRSIRDLAYEYREHLEQLPTEEERVDRLCELNVIQQVANVS HTSIVQNAWHRGQSLSVHGCIYGIKDGLWKNLNVTVSGLDQLPPQYRLSPLGGCC" misc_feature complement(5245548..5246093) /locus_tag="PA4676" /note="Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an...; Region: beta_CA_cladeA; cd00883" /db_xref="CDD:238448" misc_feature complement(order(5245578..5245580,5245821..5245823, 5245830..5245832,5245860..5245862,5245875..5245877, 5245941..5245943,5245950..5245952,5245986..5245994, 5245998..5246000,5246019..5246021,5246025..5246027)) /locus_tag="PA4676" /note="active site clefts [active]" /db_xref="CDD:238448" misc_feature complement(order(5245821..5245823,5245830..5245832, 5245992..5245994,5245998..5246000)) /locus_tag="PA4676" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:238448" misc_feature complement(order(5245557..5245559,5245563..5245565, 5245569..5245574,5245578..5245580,5245767..5245769, 5245875..5245880,5245887..5245892,5245932..5245934, 5245938..5245940,5245944..5245952,5245965..5245967, 5245971..5245976,5245980..5245982,5245986..5245997)) /locus_tag="PA4676" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238448" gene complement(5246185..5247423) /locus_tag="PA4677" /db_xref="GeneID:881426" CDS complement(5246185..5247423) /locus_tag="PA4677" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253366.1" /db_xref="GeneID:881426" /translation="MCDTLILRHQGQTWFAKNSDREPAEPQRLLRLPAVRNDPEARLR TTYLDIPQTAQRHALVISQPSWIWGAEMGVNEHGVAIGNEAVFTKLTRQRGTALLGMD LLRLGLERGASAREALEVITGLLQRYGQGGPAGYRDKRIRYDNSFLIADPGEAWVLET AGNLWAAKKVERWAISNALTLGHEFDLCSRDLEDQARRQGCWDGRGDFHFARVFDTRL LPWVGGAHRRCRINQRFLDSLPGEPDWHALFAALRHHGPRGDHFRRHNNRQVCMHAGS FWRPSQTTASLVARLRDDGPLLAATGTSAPCLGLFQPLSFDPASGAAVLSQPREAVQE SPWWRFEAVHRRALTDRAFRRLLRSGRDWLERELFADLEQPDWPRLAEDAAAWHACWH DQVAMQPLAQQRWWRSHAAL" misc_feature complement(<5246782..5247393) /locus_tag="PA4677" /note="Dipeptidase [Amino acid transport and metabolism]; Region: PepD; cl41909" /db_xref="CDD:477862" protein_bind 5247561..5247573 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4677" /bound_moiety="AmrZ" protein_bind complement(5247576..5247591) /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA4677" /bound_moiety="LasR" protein_bind complement(5247586..5247598) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4677" /bound_moiety="AmrZ" protein_bind 5247592..5247604 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4677" /bound_moiety="AmrZ" gene complement(5247622..5248074) /gene="rimI" /locus_tag="PA4678" /db_xref="GeneID:881427" CDS complement(5247622..5248074) /gene="rimI" /locus_tag="PA4678" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="peptide n-acetyltransferase RimI" /protein_id="NP_253367.1" /db_xref="GeneID:881427" /translation="MSDAISFRPMTEADLDAVLKIEYAAFSHPWTRGIFSEGLKNYHC WLMFEGSQQVGHGVIQIILDEAHLLNITVKPESQGRGLGLRLLEHLMREAAGHQAREC FLEVRASNQAAYRLYERYGFNEIGRRRDYYPAVGGREDALVMACTLFD" misc_feature complement(5247643..5248035) /gene="rimI" /locus_tag="PA4678" /note="ribosomal-protein-alanine acetyltransferase; Region: rimI; TIGR01575" /db_xref="CDD:273701" misc_feature complement(order(5247823..5247828,5247856..5247864)) /gene="rimI" /locus_tag="PA4678" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene complement(5248071..5248772) /locus_tag="PA4679" /db_xref="GeneID:881431" CDS complement(5248071..5248772) /locus_tag="PA4679" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253368.1" /db_xref="GeneID:881431" /translation="MPVRARAAIDAPQARVPQAEAPASAPSVAPAAPVEGRGIPISLP KPGAPAAKKAEPVAPVEEAPAESPAVQAPPPRFALQLLQAGSCTLLVELPTGEPFASR DPGYLLLRDLLRAAGLPDSPRLIGEPVRWPLLARGNLDQGPQAALEFVQSFVAARMEE SERSRCLWLVGLPAIRFAGEGDEGSLFRELQVDGLGATWAVPGLEALMEEPALKGELW RAMRRVRQRWSSEIQ" gene complement(5249032..5249568) /locus_tag="PA4680" /db_xref="GeneID:881432" CDS complement(5249032..5249568) /locus_tag="PA4680" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253369.1" /db_xref="GeneID:881432" /translation="MAKQTHPLAGGIGILAALALLFSASAGAELRSLGDSDLDDVVGQ AGISISASLNLQENPSQTRCAGGCGARLAIQPAGSGNNYLVIDDISGKFSFDEVTLDV VTIKDGFGGDGAAFNRPVLRVGLKDTSFQDLSFTIAGANKARGTDPGLVQTNLVSARI DGTLKLQGNVNIFTVAPR" gene complement(5249599..5250618) /locus_tag="PA4681" /db_xref="GeneID:881437" CDS complement(5249599..5250618) /locus_tag="PA4681" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253370.1" /db_xref="GeneID:881437" /translation="MSRACLLAALLAAPFAHAEMTALDDEQLSDVQGAGIGFVLDSAM VDGNKATIAINGVTNTATGQNVPITVKELYVAATGSNKGSTLAPVTLGRLNFPFKLNL AKGSVLTTQLDDGRVVSTLPDTADVIELAFPSLVSGAGGQPCIAGYAGAGSNCSSRAS EKVDAGIRFDFGVTSTRTDVLNLDFSELAMDGSYLRFWGANARSQLVGEIRLNLYAKT FEIMSCGAGSPSCVSAAEQAARTVYLTNAYASVALGYGKSQPLLFSVTADGNFTFELP KLTLANAADFYANAPRTSLVIENLNIGGTRPGYGQVPTGGYNMGRNEISGLSFNYLKV TSHNL" gene complement(5250620..5251666) /locus_tag="PA4682" /db_xref="GeneID:881438" CDS complement(5250620..5251666) /locus_tag="PA4682" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253371.1" /db_xref="GeneID:881438" /translation="MSRRLPFLLRCALFCGAGLLAATAQARMESLDDDQLSDVVGQAF INLTTDAANGLNFTRINFGADIETQLNMKKLQLGQYNRSGELAGSADIAIDNFALGTV NDTTGAINPFLISNPYIEFAYDGSKMVGIRIGFGEAKGYLSGDIKTLTGNVPVDLYGT GSQLGGSISCGLLALDCLAAKTAITLTGSSQYTAQAELVNSSGNPDPIRAAMIGLKNG TALDMHDSTIIGSLVNVLLPFLTSNDCKLMGAQTCFNLAQYQSFPIGTVDPNNAQNFI DSSKGFFISMQSQNVQWRDQQDPSKLVAALAGAFLNMSRNADGTAPIKVDFGQAFNGI PRQDTCLGGLNKGC" gene complement(5251871..5252473) /locus_tag="PA4683" /db_xref="GeneID:881444" CDS complement(5251871..5252473) /locus_tag="PA4683" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253372.1" /db_xref="GeneID:881444" /translation="MNDAAYAEARWAELQNQGDLAWDLDAITNRSEAIAFLKRFENRL CIYSAYVEKLYSNYSFVIPESDHGGITILPSEQAWHDTFHDIPLAAVEPTGIHILPGE TMGYRGLYLKIPGEHRLVASKELPFQEGLKLLIQRYQAHDDVFLPILVKGDLREYEAR MPSLHLHRINPARLSAHSLLSLNAIKGAIADHLIGLFRQQ" protein_bind complement(5252613..5252625) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4683" /bound_moiety="AmrZ" gene 5252758..5254056 /locus_tag="PA4684" /db_xref="GeneID:881445" CDS 5252758..5254056 /locus_tag="PA4684" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253373.1" /db_xref="GeneID:881445" /translation="MIDPRRVLRALAEHWALLEPLCERFDAGTLSLAELRSQLNTQLP ESNPAEITALLDQWIRLDILVPVAKSPNRFELNAQIHDFLAYLRHEHRLGLCLEIEAY LRHLERLAGYIQDAFETRDSQDLARQLRLLDMRVRDVLKKLGNDEQALIGVAERAKTS DRQIPLAQRYAEVLATWDEYVEPMIQLVSADGAFEQGVRRVEQVLLRLLGEQQRLGHL VDDDLVLRTHARILEMQTNAQLTLRRARELLLPLREEARRHNAVTRGAALALAAIRRK GLDAVPQAAMPLFTRPQSTFLGTASQVESYVFALARFEPKPAQFPKSSGTRKSNGPAR PPRTAREMIERCQAALPLPDLMQWLLAQEPDGATDELLYWFSRLSRDARFQRERLQRR EYETTEHCVSLCSFALNPAAKDKGQARDADTLSASETHAS" misc_feature 5252758..5253993 /locus_tag="PA4684" /note="Mks condensin complex protein MksB; Region: condensinMksB; NF040857" /db_xref="CDD:468795" gene 5254046..5254741 /locus_tag="PA4685" /db_xref="GeneID:881449" CDS 5254046..5254741 /locus_tag="PA4685" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253374.1" /db_xref="GeneID:881449" /translation="MHLDLSELTQLAPIFRELFKGYHISHRDPELYTQLSSHQDQYRG LFRAMGFELVCDTRGFYYFVPEQVGAQVNKTAQRLALFTFILVEHLADQGRDPLSVLD GGSIGREELPPLLEKYRDLFLQAEVQTQEELEEKVMRRLTQLGFASEDSGVYRFMPPM HRFLDVCLSVQQDRNLSASLHADLPLQTPVLVDDGEIEPLMASDEELSEESEEDALAR AIAEEHAQQEADA" misc_feature 5254046..5254738 /locus_tag="PA4685" /note="bacterial condensin complex subunit MukE; Region: MukE; cl46175" /db_xref="CDD:480515" misc_feature order(5254097..5254108,5254238..5254240,5254241..5254249, 5254253..5254255,5254262..5254267,5254274..5254276, 5254283..5254288,5254295..5254300,5254304..5254306, 5254313..5254330,5254358..5254360,5254373..5254375, 5254385..5254387,5254472..5254474,5254484..5254486, 5254502..5254504,5254508..5254510,5254526..5254537, 5254541..5254558,5254565..5254567,5254598..5254600, 5254628..5254639,5254643..5254645) /locus_tag="PA4685" /note="MukE-MukF interface [polypeptide binding]; other site" /db_xref="CDD:319980" gene 5254738..5257584 /locus_tag="PA4686" /db_xref="GeneID:881450" CDS 5254738..5257584 /locus_tag="PA4686" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253375.1" /db_xref="GeneID:881450" /translation="MSQTRYGIRRFALLNTAGYSLGIFPLENPLSIYGANNLGKSASI NALQFPILARLSDMSFGKYSMEQSRRFYFASDTSYILLELMLPHGPHVIGVAGRGPGG GFGHQFFAYAGELSLDHYQKNGTCLRQRELFANLEREGIKAYEVKPEELRRLLVGGHT SIPLDLTMIPLRSTSEQSLKTFRSLFINLLHMREITAAKLKQLFLDAFEHSLRSGNVD YIAACEEAFRDVRRMEQDYQALVAAGPLVEALANGVTQRDVLRGKMHRLSPLLDSLLG TWHDYAGARREELLIQHEQYRAEQDGLQNEQRGGTQELMRLEREIAGIQRWLGELSVL KTRFALVDDAKVLEQQLLAAKDAHDELAGALAHSRQFSSEDLEERLRDLEKRLKNVRQ QLEHADNNSYARLREEFSQQDVERLMRLFNGALFSLPLGENGVNLDDGDVWVKSVEAI LDHFKGEHFEAPGLSIDLSHIEPPALQALADRAALRDQKERLEKELKQLKTQQSVAAD RAASKAQAEKLYQDVLDAQKALEDFRRTQTLTAEEPEKLAELAQLEASQDELKRSSDA FAERVQQLSARLQLVARQLGDLEAKERTLEDALRRRQLLPANLPFGTPFMEPVDDSLD NLLPLLNDYQDTWQALQRIDGQIEALYAQVRLKGVAKFDSEDDTERRLKLLINAYAHR QDEALTLAKARRAAVTDIARTLRNIRSDYDNLEHQLALFNREINKRQVSNLQSFRIVL APNKDALKHIDQIIHSAGQYEEGENLSVFDLTQSAEQDAKNEEAKEYLARLVAANHNQ LGLKDLFELAFEITKVNGQPIMHTDIDGAASNGTTMTIKALTNMYLLLHLMDREQAGR VRLPYYLDEAADIDERNQAALLETSLQLGFVPILASVKPQVSAHVAIDLEGGSGPNGI YIDEADWKYIRRRDAAASGETRAASEPEEAGEPA" misc_feature 5254738..5257515 /locus_tag="PA4686" /note="Mks condensin complex protein MksF; Region: condensinMksF; NF040859" /db_xref="CDD:468797" gene 5257696..5258703 /gene="hitA" /locus_tag="PA4687" /db_xref="GeneID:881454" CDS 5257696..5258703 /gene="hitA" /locus_tag="PA4687" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ferric iron-binding periplasmic protein HitA" /protein_id="NP_253376.1" /db_xref="GeneID:881454" /translation="MPVRLLNRFRHAALACLLGSLSLNAAADPVTLTLYNGQHAATGI AIAKAFQDKTGIQVKIRKGGDGQLASQITEEGARSPADVLYTEESPPLIRLASAGLLA KLEPETLALVEPEHAGGNGDWIGITARTRVLAYNPKKIDEKDLPKSLMDLSDPSWSGR FGFVPTSGAFLEQVAAVIKLKGQEEAEDWLTGLKAFGSIYTNNVTAMKAVENGEVDMA LINNYYWYTLKKEKGELNSRLHYFGNQDPGALVTVSGAAVLKSSKHPREAQQFVAFML SEEGQKAILSQSAEYPMRKGMQADPALKPFAELDPPKLTPADLGEASEALSLERDVGL N" misc_feature 5257786..5258697 /gene="hitA" /locus_tag="PA4687" /note="Substrate binding domain of ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily; Region: PBP2_Fbp; cd13543" /db_xref="CDD:270261" misc_feature order(5258197..5258202,5258299..5258307,5258356..5258358, 5258362..5258367) /gene="hitA" /locus_tag="PA4687" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270261" gene 5258724..5260262 /gene="hitB" /locus_tag="PA4688" /db_xref="GeneID:881460" CDS 5258724..5260262 /gene="hitB" /locus_tag="PA4688" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="iron (III)-transporter permease HitB" /protein_id="NP_253377.1" /db_xref="GeneID:881460" /translation="MRLRTGSRRRTPFWLLLPVLLLALLASLPLLYVAAKAWDAGWHS AWQLLWRPYVFRLLGNTLWLMFGVTLLSALLGLALAWCVERSDLPARRFWNVVLCLPF AIPAFVSSFTWVSLSPMYEGLGGAILVMTMSKYPLVYLPVAATLRGIDPSLEESARML GLSRRQVFLRVTLPLLRPTLAATGLLVALHMLVEFGALSILRYQTFTTAIYQEFELEF SNATAAMLSSVLLALCFLLLWLELRMRGRGRLVRTGQGSARRAERVRLGLGKWPLQAL LATLVLVGTGIPLVMLGYWLYEGSSASFPLMEIASTLLSSLSLAFGGALLSCLLALPV SILVVRYPGALARWTQRLPYLLQALPGLVIALSLVYFSLHYLPATYQTTGLLLVAYAL LFMPLTQAPIRVALEKASPQLEEAARTLGQTPLMAFLRITLPIISPAIGAGFVLVFLD TMKELTATLVLGPTGLSTLATSVWVHTANLEYAAAAPYAALLILISGLPVYLLTTRAH LSTH" misc_feature 5258817..5260232 /gene="hitB" /locus_tag="PA4688" /note="ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; Region: FbpB; COG1178" /db_xref="CDD:440791" gene complement(5260343..5262649) /locus_tag="PA4689" /db_xref="GeneID:881461" CDS complement(5260343..5262649) /locus_tag="PA4689" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253378.1" /db_xref="GeneID:881461" /translation="MSDLPSPKKHKTSNWSAIWVLPLVALAIGAWLAWRAFDQAGVDI QVRFESGDGIQANKTEVLYKGISVGKVTDLHVSKDIKGVVATIEIKKEAQEYLSKDTR FWLVKPRVSLAGVTGLETLVSGVYIAVDPVKGEKEERYFTALKEPPPLSDKLPGLHLT LKADRLGSLEQGSPVFYRQIQVGQVKSFQLGDDQRTIEIKVHIEPAYADLVRKHTRFW NASGISISGGLSGFKVHSESLLTLVAGGIAFSTPENRTDSPPTDPSKPFRLYDDYDAA QAGLRVKLKMNDVSGIDPGRTPVMFNGVQVGLVKSIDMGKDYSSATADLAMDPRVEDM LLEGTEFWTVKPSISLAGITGLEALVKGNYIDVRFAKSGAPSREFTIRPKAPPLNTDA PGLHLVLTSDKLGSIDIGAPILYRQVRVGSVQSYQLSRDRQRVVVGVHIEPEYAHLVN TSTRFWNSSGITLTGNLSGVQVKSESLQTLITGGISFDTLDPKAPTVTKVRRFTLFDS EEAAMARGVEIQLSIDNADGLREGTPIRFKGLDIGKIESVELNPDLSGVLMKARLTSA GERVARSGTRFWVVRPALGLLRTENLGTLVSGPYIEALPSSTPGERQARFQTLAEAPN LLGRENGLRLTLSAPRKGSIKPGNLVTYRQIPVGKVVDLALGEQADRVLISILIEPRY VPLVRTGSRFWNASGFGVDASLFKGLSLRTESMEALMEGGIAFATPNNAQMGEPAKPG QTFALFDSANDEWLEWAPKIPLKETARR" misc_feature complement(5261027..5262649) /locus_tag="PA4689" /note="Intermembrane transporter PqiABC subunit PqiB [Cell wall/membrane/envelope biogenesis]; Region: PqiB; COG3008" /db_xref="CDD:442245" misc_feature complement(<5260406..5261113) /locus_tag="PA4689" /note="Intermembrane transporter PqiABC subunit PqiB [Cell wall/membrane/envelope biogenesis]; Region: PqiB; COG3008" /db_xref="CDD:442245" gene complement(5262642..5263262) /locus_tag="PA4690" /db_xref="GeneID:881465" CDS complement(5262642..5263262) /locus_tag="PA4690" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719782.1" /db_xref="GeneID:881465" /translation="MRALDAGILVCGECHQLNRADGDEHPRCSRCGAVLHARRPNSLT RTWALLITAAILYIPANLLPIMTVNLFGSGMPATIMEGVVELVHADMFPIAMVVFVAS ILVPTFKLVGIALLLYSVQRHQPMSARQRILMYRFIEWIGRWSMLDIFVIAILVALVN FGNLASIEANLGAAAFASVVVLTMLAAVTFDPRLIWDNTNLDDENE" misc_feature complement(5262669..5263256) /locus_tag="PA4690" /note="Intermembrane transporter PqiABC subunit PqiA [Cell wall/membrane/envelope biogenesis]; Region: PqiA; COG2995" /db_xref="CDD:442234" gene complement(5263249..5263956) /locus_tag="PA4690a" /db_xref="GeneID:17373386" CDS complement(5263249..5263956) /locus_tag="PA4690a" /codon_start=1 /transl_table=11 /product="paraquat-inducible protein A" /protein_id="YP_008719783.1" /db_xref="GeneID:17373386" /translation="MHCALVYNSRQIQPSSFMSDTDVRGLQDLPLEELVACHECDLLM RREPLGPGEKANCPRCGFELAAHRHQWKRRCFALVLTALFLYIPANFLPIMNLSLLGQ TRSDTVWTGVLGLYDSGMQGVAILVFLCSMVIPLVKLLCQLLVMISVRFGIARHIGML LYRGYHHLREWGMLEVYLMGILVSIVKLIDMADLSLGIGLACFVALLFTQVWLEVTMS PHQVWEALGGEDDDARA" misc_feature complement(5263267..5263905) /locus_tag="PA4690a" /note="Intermembrane transporter PqiABC subunit PqiA [Cell wall/membrane/envelope biogenesis]; Region: PqiA; COG2995" /db_xref="CDD:442234" protein_bind complement(5263748..5263760) /locus_tag="PA4690a" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(5264100..5264219) /locus_tag="PA4690.1" /db_xref="GeneID:3240214" rRNA complement(5264100..5264219) /locus_tag="PA4690.1" /product="5S ribosomal RNA" /db_xref="GeneID:3240214" gene complement(5264362..5267252) /locus_tag="PA4690.2" /db_xref="GeneID:3240216" rRNA complement(5264362..5267252) /locus_tag="PA4690.2" /product="23S ribosomal RNA" /db_xref="GeneID:3240216" gene complement(5267479..5267554) /locus_tag="PA4690.3" /db_xref="GeneID:3240213" tRNA complement(5267479..5267554) /locus_tag="PA4690.3" /product="tRNA-Ala" /db_xref="GeneID:3240213" gene complement(5267583..5267659) /locus_tag="PA4690.4" /db_xref="GeneID:3240212" tRNA complement(5267583..5267659) /locus_tag="PA4690.4" /product="tRNA-Ile" /db_xref="GeneID:3240212" gene complement(5267724..5269259) /locus_tag="PA4690.5" /db_xref="GeneID:3240211" rRNA complement(5267724..5269259) /locus_tag="PA4690.5" /product="16S ribosomal RNA" /db_xref="GeneID:3240211" gene complement(5269803..5270411) /locus_tag="PA4691" /db_xref="GeneID:881474" CDS complement(5269803..5270411) /locus_tag="PA4691" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="sulfite oxidase subunit YedZ" /protein_id="NP_253379.1" /db_xref="GeneID:881474" /translation="MRYWYLRLAVFLGALAVPAWWLYQAWIFALGPDPGKTLVDRLGL GALVLLLLTLAMTPLQKLSGWPGWIAVRRQLGLWCFTYVLLHLSAYYVFILGLDWGQL GIELSKRPYIIVGMLGFVCLFLLAITSNRFAMRKLGSRWKKLHRLVYLILGLGLLHML WVVRADLEEWTLYAVVGASLMLLRLPSIARRLPRLRTRHGVS" misc_feature complement(5269812..5270411) /locus_tag="PA4691" /note="protein-methionine-sulfoxide reductase heme-binding subunit MsrQ; Region: PRK05419" /db_xref="CDD:235452" gene complement(5270411..5271424) /locus_tag="PA4692" /db_xref="GeneID:881475" CDS complement(5270411..5271424) /locus_tag="PA4692" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="sulfite oxidase subunit YedY" /protein_id="NP_253380.1" /db_xref="GeneID:881475" /translation="MLIKIPSRSDCSESEVTSETLYLSRRRLLGASFAGLALASGLPR LGFADEQRYAGVESVPAPGWFAEKLPQTRWQAVNVQGEAITPFKDATHYNNFYEFGPN KGDPAENASALKAEPWSVVIDGEVGKPGTYALEDFVKPYQLEERIYRLRCVEAWSMVI PWLGFPLADLLKRVEPNGQAKFVRFETLQRPEQMVGQRSGFSVIDWPYMEGLRMDEAM HPLAILAVGMYGRLLPNQNGAPLRLVVPWKYGFKSIKSIVRISLVREQPKTTWESIAA NEYGFYANVNPQVDHPRWSQARERRLPSGLFSPNVRDTQMFNGYGSEVASLYSGMDLR KYY" misc_feature complement(5270414..5271418) /locus_tag="PA4692" /note="protein-methionine-sulfoxide reductase catalytic subunit MsrP; Region: PRK05363" /db_xref="CDD:235431" misc_feature complement(order(5270657..5270662,5270666..5270668, 5270675..5270677,5270699..5270701,5270714..5270716, 5270801..5270803,5270969..5270971,5271134..5271136, 5271140..5271142,5271146..5271148)) /locus_tag="PA4692" /note="Moco binding site [active]" /db_xref="CDD:238198" misc_feature complement(5270969..5270971) /locus_tag="PA4692" /note="metal coordination site [ion binding]; other site" /db_xref="CDD:238198" gene complement(5271485..5272300) /gene="pssA" /locus_tag="PA4693" /db_xref="GeneID:881482" CDS complement(5271485..5272300) /gene="pssA" /locus_tag="PA4693" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphatidylserine synthase" /protein_id="NP_253381.1" /db_xref="GeneID:881482" /translation="MSERPEEPNKASDEESLLPIDEHIEEGHDAEGRKVRHRGIYLLP NLFTTAALFSGFYAIINGMSGQFANAAIAIFVAMVLDGLDGRVARLTNTQSAFGAEYD SLSDMVAFGVAPALVAFEWALGSLGKVGWMVAFIYVAGAALRLARFNTQVGKADKRYF IGLASPAAAALVAGTVWAFSDFEIQGAKVAFLVALLVAAAGVLMVSNIKYHSFKDLDL RGRVPFVAILIVVLAFAVVFTDPPRILLLLFLAYAASGPVQYLLQLRRRKQPS" misc_feature complement(5271494..5272201) /gene="pssA" /locus_tag="PA4693" /note="Phosphatidylserine synthase [Lipid transport and metabolism]; Region: PssA; COG1183" /db_xref="CDD:440796" gene complement(5272455..5273471) /gene="ilvC" /locus_tag="PA4694" /db_xref="GeneID:881483" CDS complement(5272455..5273471) /gene="ilvC" /locus_tag="PA4694" /EC_number="1.1.1.86" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ketol-acid reductoisomerase" /protein_id="NP_253382.1" /db_xref="GeneID:881483" /translation="MRVFYDKDCDLSIIQGKKVAIIGYGSQGHAHACNLKDSGVDVTV GLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEEIEPNLKKGAT LAFAHGFSIHYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDASGNA KNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGY APEMAYFECLHELKLIVDLMYEGGIANMNYSISNNAEYGEYVTGPEVINAESRAAMRN ALKRIQDGEYAKMFITEGAANYPSMTAYRRNNAAHPIEQIGEKLRAMMPWIAANKIVD KSKN" misc_feature complement(5272485..5273471) /gene="ilvC" /locus_tag="PA4694" /note="ketol-acid reductoisomerase; Provisional; Region: PRK05479" /db_xref="CDD:235491" gene complement(5273514..5274005) /gene="ilvH" /locus_tag="PA4695" /db_xref="GeneID:881490" CDS complement(5273514..5274005) /gene="ilvH" /locus_tag="PA4695" /EC_number="2.2.1.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="acetolactate synthase small subunit" /protein_id="NP_253383.1" /db_xref="GeneID:881490" /translation="MRHIISLLLENEPGALSRVVGLFSQRNYNIESLTVAPTEDPTLS RLTLTTVGHDEVIEQITKNLNKLIEVVKLVDLSESAHIERELMLVKVKATGAQRAEVK RTTDIFRGQIVDVTSSVYTVQLAGTSDKLDSFIQAIGTASILEVVRSGVTGIARGDKT LSI" misc_feature complement(5273523..5274005) /gene="ilvH" /locus_tag="PA4695" /note="acetolactate synthase 3 regulatory subunit; Reviewed; Region: ilvH; PRK11895" /db_xref="CDD:183365" gene complement(5274008..5275732) /gene="ilvI" /locus_tag="PA4696" /db_xref="GeneID:881496" CDS complement(5274008..5275732) /gene="ilvI" /locus_tag="PA4696" /EC_number="2.2.1.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="acetolactate synthase 3 catalytic subunit" /protein_id="NP_253384.1" /db_xref="GeneID:881496" /translation="MELLSGAEMVVRSLRDEGVKYIYGYPGGALLHIYDALFKEHDVT HILVRHEQAATHMADGYARATGKPGVVLVTSGPGATNAITGIATAYMDSIPMVILSGQ VPSNMVGTDAFQETDMVGISRPIVKHSFIIKHPSEIPEVIKKAFYLAQSGRPGPVVVD IPKDMGDPTQKFEYSYPKKVKLRSYSPAVRGHSGQIRKAAEMLLAAKRPVVYSGGGVI MGNAAAPLTELAQMLNLPVTNTLMGLGGYPGADRQFLGMLGMHGSFTANLAMHHSDVI LAVGARFDDRVINGAAKFCPNAKIIHIDIDPASISKTIKADIPIVGPVDSVLTEMVAI VREIGETPNQDAQAAWWKQIDEWRGNRGLFPYDKGDGSIIKPQTVIETLYEVTHGDAF ITSDVGQHQMFASQYYKFNKPNRWINSGGLGTMGFGFPAAMGIKLNFPDDDVACVTGE GSIQMNIQELSTCLQYDLPVKIVNLNNGALGMVRQWQDMQYNSRYSHSYMESLPDFVK LAEAYGHVGMRITDLKDLKPKMEEAFAMKNRLVFLDIQVDASEHVYPMQIRDGAMRDM WLSKTERT" misc_feature complement(5274011..5275732) /gene="ilvI" /locus_tag="PA4696" /note="acetolactate synthase 3 large subunit; Region: PRK06466" /db_xref="CDD:180578" gene 5276283..5276735 /locus_tag="PA4697" /db_xref="GeneID:881497" CDS 5276283..5276735 /locus_tag="PA4697" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253385.1" /db_xref="GeneID:881497" /translation="MRRMILPASLLLALSSFAMAAPIYKWVDAEGVTHFGAQPPQGAQ ATTVNTQTAPPPDNFPLPPSTPAPTIQQKPADPEQKAIDDKVKQQVAKEEAERKQFCE ETRNNLAQLKNNPRVRVDEGKGELRRLGEEERQERIAKAEKAIQENCR" misc_feature 5276337..5276441 /locus_tag="PA4697" /note="Domain of unknown function (DUF4124); Region: DUF4124; pfam13511" /db_xref="CDD:433269" gene complement(5276843..5277172) /locus_tag="PA4698" /db_xref="GeneID:881505" CDS complement(5276843..5277172) /locus_tag="PA4698" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253386.1" /db_xref="GeneID:881505" /translation="MDRRVYALADQLLLIERELRALGWWSESSPAPEALASPEPFCVD TLALEQWLQWIFLPRMKLILESDSALPQASGILAIAEVAYAQRGEEVAGLLAALGEFD RLIGGPS" misc_feature complement(5276846..5277151) /locus_tag="PA4698" /note="Uncharacterized conserved protein YqcC, DUF446 family [Function unknown]; Region: YqcC; COG3098" /db_xref="CDD:442332" gene complement(5277172..5277951) /locus_tag="PA4699" /db_xref="GeneID:881506" CDS complement(5277172..5277951) /locus_tag="PA4699" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253387.1" /db_xref="GeneID:881506" /translation="MKKIFVFAALAGSAVLAGCASPQHGAIPVVDSGTPVSNQESGGF RITRTQVPRTQQGAATQGIPQGGDSGVVVMVPQGANSAPIQTFPAQSGAAPISSAPLG TGTQYQAPPSSASTPPLGGSYNMPPSGASRSAPTGIPASGSAGSLAADEQLDGPVLAM LTTAQQQQGSGDLNSAAASLERAQRIAPREPQVLYRLAQVRLAQGDAAQAEQVARRGL SYANGRPALQAGLWELIAQAREKQGDSAGAALARQKAKVSS" misc_feature complement(5277187..>5277477) /locus_tag="PA4699" /note="Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: BepA; COG4783" /db_xref="CDD:443813" misc_feature complement(5277292..5277384) /locus_tag="PA4699" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(5277187..5277267) /locus_tag="PA4699" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" gene complement(5277968..5280292) /gene="mrcB" /locus_tag="PA4700" /db_xref="GeneID:881511" CDS complement(5277968..5280292) /gene="mrcB" /locus_tag="PA4700" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 1B" /protein_id="NP_253388.1" /db_xref="GeneID:881511" /translation="MTRPRSPRSRNSKARPAPGLNKWLSWALKLGLVGLVLLAGFAIY LDAVVQEKFSGRRWTIPAKVYARPLELFNGLKLSREDFLRELDALGYRREPSVSGPGT VSVAASAVELNTRGFQFYEGAEPAQRVRVRFNGNYVSGLSQANGKELAVARLEPLLIG GLYPAHHEDRILVKLDQVPTYLIDTLVAVEDRDFWNHHGVSLKSVARAVWVNTTAGQL RQGGSTLTQQLVKNFFLSNERSLSRKINEAMMAVLLELHYDKRDILESYLNEVFLGQD GQRAIHGFGLASQYFFSQPLAELKLDQVALLVGMVKGPSYFNPRRYPDRALARRNLVL DVLAEQGVATQQEVDAAKLRPLGVTRQGSMADSSYPAFLDLVKRQLRQDYRDEDLTEE GLRIFTSFDPILQEKAETSVNETLKRLSGRKGVDQVEAAMVVTNPETGEIQALIGSRD PRFAGFNRALDAVRPIGSLIKPAVYLTALERPSKYTLTTWVQDEPFAVKGQDGQVWRP QNYDRRSHGTIFLYQGLANSYNLSTAKLGLDVGVPNVLQTVARLGINRDWPAYPSMLL GAGSLSPMEVATMYQTIASGGFNTPLRGIRSVLTADGQPLKRYPFQVEQRFDSGAVYL VQNAMQRVMREGTGRSVYSQLPSSLTLAGKTGTSNDSRDSWFSGFGGDLQAVVWLGRD DNGKTPLTGATGALQVWASFMRKAHPQSLEMPMPENVVMAWVDAQTGQGSAADCPNAV QMPYIRGSEPAQGPGCGSQNPAGEVMDWVRGWLN" misc_feature complement(5278031..5280178) /gene="mrcB" /locus_tag="PA4700" /note="penicillin-binding protein 1B; Region: PBP_1b; TIGR02071" /db_xref="CDD:273952" gene 5280505..5282067 /locus_tag="PA4701" /db_xref="GeneID:881512" CDS 5280505..5282067 /locus_tag="PA4701" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253389.1" /db_xref="GeneID:881512" /translation="MSQTLIAALQNPALYPHPVERFEVIETHISWVLLTGPYAYKIKK PMDFGFLDFTSLDKRRFYCNEELRLNQRLTDDLYLEVLPITGSEEAPRIGGDGEAIEY LLKMRQFPQDNLLAAIQGRGELSNQHIDELAEQIAHFHQNTPKVPLEHPLGTAESCMA PVRQNFEQVRPLLKDKADLQQLDALEAWAESSFERLLPVLQERKAKGFIRECHGDIHL GNAALIDGRVVLFDCIEFNEPFRFTDVCADFAFLAMDLEDRGLKCHARRFVSLYLEHT GDYQALELLNFYKAYRAMVRAKVALFSLGYQTDAVQRAATLRQYRNYANLAESYSAIP SRFLAVTHGVSAVGKSQVAMRLVEALGAVRLRSDIERKRLFGEQPEHDRGQFAAGIYS SQASEATYAHLHQLAAKILQAGYPVVIDAAYLKQNQRQAACHIAEETGVPFLILDCQA PEAVIAGWLAQRQAEGKDPSDATLDVIRTQQATREPLTAAETVQSKRVDTHDAASLDG LVDGIRQRLPGL" misc_feature 5280511..5281512 /locus_tag="PA4701" /note="Aminoglycoside phosphotransferase family enzyme [General function prediction only]; Region: COG2187" /db_xref="CDD:441790" misc_feature 5281516..5281965 /locus_tag="PA4701" /note="AAA domain; Region: AAA_33; pfam13671" /db_xref="CDD:463952" gene 5282159..5282506 /locus_tag="PA4702" /db_xref="GeneID:881517" CDS 5282159..5282506 /locus_tag="PA4702" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253390.1" /db_xref="GeneID:881517" /translation="MNSPRQLDSPLYQLLHAEDIEGFNRQKPADGWIDLAGGDFRGLD LRLLDAARVDFSDAYFRGADLRGVDLREARLEGASLAHAQISGTYFPLRLAPDEIRMS VNFGTRLRYLPEP" misc_feature <5282258..5282428 /locus_tag="PA4702" /note="Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; Region: YjbI; COG1357" /db_xref="CDD:440968" gene 5282732..5283004 /locus_tag="PA4703" /db_xref="GeneID:881518" CDS 5282732..5283004 /locus_tag="PA4703" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253391.1" /db_xref="GeneID:881518" /translation="MNDELLNLKNLGKTSTQWLHAVGIHSATDLRRLGSVGAYRAVRA RGFRASKVLLYAIEGALLDVHWNELSPDHKAALLGELETFPVRNKS" misc_feature 5282741..5282971 /locus_tag="PA4703" /note="TfoX C-terminal domain; Region: TfoX_C; pfam04994" /db_xref="CDD:461512" protein_bind 5282991..5283011 /experiment="Beta-gal reporter assay [PMID: 19801409]" /experiment="EMSA [PMID: 19801409]" /experiment="Site directed mutagenesis [PMID: 19801409]" /note="Transcription factor binding site for NP_249343.; Evidence of regulation for: PA4704" /bound_moiety="Vfr" gene 5283109..5283906 /gene="cbpA" /locus_tag="PA4704" /db_xref="GeneID:881530" CDS 5283109..5283906 /gene="cbpA" /locus_tag="PA4704" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="cAMP-binding protein A" /protein_id="NP_253392.1" /db_xref="GeneID:881530" /translation="MYLLGEQPAYADQLINRLQGIPHRLLEGLAPSGPALELERSDDL ERELPADQVFLVESGLLHALVDERPLFYLQEGDLLGLRRGLELPACRHANEEPIRLLP YSRDALLQHIHADQERQELLLQYLIGQTALLGDALAHLKQPEVRPATGFRHFAAGEAL IRQGDDADHVFIIIEGHAEALVDGQKVGDVQKDEIFGAMAVFTREKRSATVVASEPCT VMVIPKEQFLGLMQNNPRIAHSLIEGMARRIDLLNREVTQLRLRRSA" misc_feature 5283538..5283834 /gene="cbpA" /locus_tag="PA4704" /note="effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO...; Region: CAP_ED; cd00038" /db_xref="CDD:237999" misc_feature order(5283697..5283702,5283727..5283735) /gene="cbpA" /locus_tag="PA4704" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:237999" misc_feature order(5283793..5283801,5283811..5283819) /gene="cbpA" /locus_tag="PA4704" /note="flexible hinge region; other site" /db_xref="CDD:237999" gene 5283960..5284110 /gene="prrF1" /locus_tag="PA4704.1" /db_xref="GeneID:4179187" ncRNA 5283960..5284110 /ncRNA_class="other" /gene="prrF1" /locus_tag="PA4704.1" /product="regulatory RNA PrrF1" /db_xref="GeneID:4179187" protein_bind 5283967..5283985 /gene="prrF1" /locus_tag="PA4704.1" /experiment="'EMSA [PMID: 15210934, 8633080]'" /experiment="DNAse footprinting [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="Northern blot [PMID: 15210934]" /experiment="RNAse protection [PMID: 8633080]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA4704.1" /bound_moiety="Fur" gene 5284172..5284319 /gene="prrF2" /locus_tag="PA4704.2" /db_xref="GeneID:4179185" ncRNA 5284172..5284319 /ncRNA_class="other" /gene="prrF2" /locus_tag="PA4704.2" /product="regulatory RNA PrrF2" /db_xref="GeneID:4179185" protein_bind 5284179..5284197 /gene="prrF2" /locus_tag="PA4704.2" /experiment="'EMSA [PMID: 15210934, 8633080]'" /experiment="DNAse footprinting [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /experiment="Northern blot [PMID: 15210934]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA4704.2" /bound_moiety="Fur" protein_bind complement(5284185..5284203) /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /note="Transcription factor binding site for NP_253452." /bound_moiety="Fur" gene complement(5284370..5285257) /locus_tag="PA4705" /db_xref="GeneID:881531" CDS complement(5284370..5285257) /locus_tag="PA4705" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253393.1" /db_xref="GeneID:881531" /translation="MRIRLFAFCLLLGGCQSQLPPLPDWQSPEGRDDPQTGRIVELRS GVTLSPQQLVARLAAAPRVIVGEKHDNPDHHAVELWLAQALGEYRAQGSLLLEMLDPG QQPRVDAVRAQLGNGKPVANLEEALDWQKGWDWTQYGPLVSWAVAQPAPLLAANLQRS EIMRIYRERPPLPGTASRRDSVRLPLLAQIRESHCGMLPDDQLPAMLAVQQQRDRRMA ERLRDAPRPAMLVAGSFHARRDLGVPVHLRDLGAEKGTQVLMLVEAGQAVTTREADYA WYTPAQPDKDYCAEMKKAR" misc_feature complement(5284421..5285254) /locus_tag="PA4705" /note="Putative heme-binding protein PhuW [General function prediction only]; Region: PhuW; COG3016" /db_xref="CDD:442253" gene complement(5285268..5286035) /locus_tag="PA4706" /db_xref="GeneID:881536" CDS complement(5285268..5286035) /locus_tag="PA4706" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hemin importer ATP-binding subunit" /protein_id="NP_253394.1" /db_xref="GeneID:881536" /translation="MLRVENLSIRRGGKTVLEGLELELRPGEMLGVLGPNGAGKSTLL GALCGELEPAEGLVLLDERGLDDWPGVARAQRLAVLPQSSSLGFAFPVEAVVGFGRLP HSSGRERDVQIVAEALAAADASHLAGRSYLALSGGERQRVHLARVLAQLWPGEPGQVL LLDEPTSALDPLHQHTTLQAVHDFARRGASVLVILHDLNLAARYCDRLLLLQNGRPHL LGTPEEVLRPEPLRAVFGLEVLVQRHPERGHPLIVAR" misc_feature complement(5285271..5286035) /locus_tag="PA4706" /note="hemin importer ATP-binding subunit; Provisional; Region: hmuV; PRK13548" /db_xref="CDD:237422" gene complement(5286035..5287018) /locus_tag="PA4707" /db_xref="GeneID:881537" CDS complement(5286035..5287018) /locus_tag="PA4707" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_253395.1" /db_xref="GeneID:881537" /translation="MLVLWLSLALGPVSLPLGDTLRAALRLAGLPLDGTGLAQAEMIL GQIRLPRTLLGLAVGAVLALSGVAMQGLFRNPLADPGLVGVSSGAALGAALAIVFGAS LGGLPAFLAPYLLSLCAFGGGLGVTWLVYRLGRRDGQTSVATMLLAGIALTALSGAVI GLFTYLADDATLRTLTFWNLGSLNGASYPRLWPLLLVALLVACWLPRRADALNALLLG ESEARHLGFDVERLKAELVLCTALGVGAAVAAAGMIGFIGLVVPHLIRLVAGPDHRTL LPASMMAGAILLLLADLLARLALAPAELPIGIVTALIGAPFFLYLLLRGRA" misc_feature complement(5286041..5287000) /locus_tag="PA4707" /note="ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]; Region: FepD; COG0609" /db_xref="CDD:440374" gene complement(5287069..5287962) /gene="phuT" /locus_tag="PA4708" /db_xref="GeneID:881543" CDS complement(5287069..5287962) /gene="phuT" /locus_tag="PA4708" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="heme-transporter PhuT" /protein_id="NP_253396.1" /db_xref="GeneID:881543" /translation="MRIDRLFNGLALGILLGTGMAQAAELPQRWVSAGGSLSEWVVAL GGESKLVGVDTTSQHPQALKQLPSVGYQRQLAAEGVLALRPDILIGTEEMGPPPVLKQ LEGAGVRVETLSAKPDLEALESNLKKLGDWLGVPQRAEAAELDYRQRLRRQADWIAAA QKSQPAPGVLLVIGNAGGQLLVAGRNTGGDWVLNRAGARNLATHEGYKPISVEALAAL DPVAVVIADRSLEGDAARAALLKQNPGLAATRAARDGRLLVLDPTLLVGGLGPRLPDG LAALSAAFYPSAKPLSTEAAH" misc_feature complement(5287171..5287884) /gene="phuT" /locus_tag="PA4708" /note="Hemin binding protein HutB. These proteins have been shown to function as initial receptors in ABC transport of hemin and hemoproteins in many eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a...; Region: HutB; cd01149" /db_xref="CDD:238569" misc_feature complement(5287777..5287779) /gene="phuT" /locus_tag="PA4708" /note="putative hemin binding site [active]" /db_xref="CDD:238569" gene complement(5287972..5289036) /locus_tag="PA4709" /db_xref="GeneID:881544" CDS complement(5287972..5289036) /locus_tag="PA4709" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hemin degrading factor" /protein_id="NP_253397.1" /db_xref="GeneID:881544" /translation="MSSTPSLSHSPAELYRAWQDLRAERPQLRARDAAALLQVSEGEL VASRVGIDAVRLRPDWAALLPALGELGPIMALTRNEHCVHERKGPYREVTVSANGQMG LVVSPDIDLRLFLGGWNAVFAIAEETARGTQRSIQVFDQQGVAVHKVFLAEASDVRAW EPLVERLRAAEQDAVLALHEPRAPAAALVDAQIDAAALREGWAALKDTHHFHALLKKH GAQRTQALRLAGGEWAERLDNGDLAKLFEAAAESGLPIMVFVGNAHCIQIHTGPVCNL KWLDDWFNVLDPEFNLHLKTTGIAELWRVRKPSTDGIVTSWEAFDADGELIVQLFGAR KPGEPERDDWRELAESFKAL" misc_feature complement(5287987..5289003) /locus_tag="PA4709" /note="Putative heme degradation protein [Inorganic ion transport and metabolism]; Region: HemS; COG3720" /db_xref="CDD:442934" protein_bind 5289100..5289118 /experiment="DNAse footprinting [PMID: 10658665]" /experiment="RNAse protection [PMID: 10658665]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA4710" /bound_moiety="Fur" protein_bind 5289124..5289142 /experiment="DNAse footprinting [PMID: 10658665]" /experiment="RNAse protection [PMID: 10658665]" /note="Transcription factor binding site for NP_253452.; Evidence of regulation for: PA4710" /bound_moiety="Fur" gene 5289217..5291511 /gene="phuR" /locus_tag="PA4710" /db_xref="GeneID:881550" CDS 5289217..5291511 /gene="phuR" /locus_tag="PA4710" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="heme/hemoglobin uptake outer membrane receptor PhuR" /protein_id="NP_253398.1" /db_xref="GeneID:881550" /translation="MPLSPPFALRPCLALLLLSPSLALAGNAVPLTPTTITATRTEQA VDSVPSTVSVQTREQLDRQNVNNIKELVRYEPGVSVGGAGQRAGITGYNIRGIDGNRI LTQIDGVELPNDFFSGPYAQTHRNYVDPDIVKRVEILRGPASALYGSNAIGGAVSYFT LDPSDIIKDGKDVGARLKAGYESASHSWLTSATVAGRADDFDGLLHYGYRQGHETESN GGHGGTGLSRSEANPEDADSYSLLGKLGWNYAEGSRFGLVFEKYKSDVDTDQKSAYGG PYDKGKPAIPPSMLPGGMYQWRKGNDTLTRERYGLEHHFLLDSQVADRIQWSLNYQLA KTDQATREFYYPITRKVLRTRDTTYKERLWVFDSQLDKSFAIGETEHLLSYGINLKHQ KVTGMRSGTGTNLDTGADSPRDALERSSDFPDPTVKTYALFAQDSISWNDWTFTPGLR YDYTRMEPHITDEFLRTMKQSQNTAVDESDKKWHRVSPKFGVTYDFAQHYTWYGQYAQ GFRTPTAKALYGRFENLQAGYHIEPNPNLKPEKSQSFETGLRGKFDEGSFGVAVFYNK YRDFIDEDALNTDSTGGNGQTFQSNNIERAVIKGVELKGRLELGAFGAPQGLYTQGSV AYAYGRNKDNGEPINSVNPLTGVFGLGYDEADGNYGGLLSWTLVKRKDRVDDSTFHTP DGTASQFKTPGFGVLDLSAYYRLSKDLTLNAGLYNLTDKKYWLWDDVRGYDSVGEASA LAPANIDRLSQPGRNFAVNLVWDI" misc_feature 5289346..5291502 /gene="phuR" /locus_tag="PA4710" /note="Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in strand and shear number. Classical (gram-negative) porins are non-specific channels for small hydrophillic molecules and form 16 beta-stranded barrels (16,20)...; Region: OM_channels; cl21487" /db_xref="CDD:473880" misc_feature order(5289367..5289396,5289424..5289453,5289490..5289507, 5289526..5289549,5289604..5289636,5289670..5289696) /gene="phuR" /locus_tag="PA4710" /note="N-terminal plug [active]" /db_xref="CDD:238657" misc_feature order(5290222..5290224,5290291..5290293) /gene="phuR" /locus_tag="PA4710" /note="ligand-binding site [chemical binding]; other site" /db_xref="CDD:238657" gene 5291614..5291961 /locus_tag="PA4711" /db_xref="GeneID:881551" CDS 5291614..5291961 /locus_tag="PA4711" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253399.1" /db_xref="GeneID:881551" /translation="MIPANGAPMIHLCPSSHLAEGNSRGFLVDERRLFAVRRDGRAYI YLNRCPHRGIPLEWQPDTFLDDSASLIRCASHGALFLIESGECVAGPCAGERLRALPC REDAEGLWVELDD" misc_feature 5291641..5291958 /locus_tag="PA4711" /note="Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase [Inorganic ion transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]; Region: NirD; COG2146" /db_xref="CDD:441749" gene 5292042..5292554 /locus_tag="PA4712" /db_xref="GeneID:881559" CDS 5292042..5292554 /locus_tag="PA4712" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253400.1" /db_xref="GeneID:881559" /translation="MRRFSLRFVLLLLFGLLLYACRNEPGPVRLAPGVTAADYRTFFI QAVRAEGHRIDFEERFDTAVRRALEAKGYRYHAEHGDLRVIYALGLQRQPGLEMRPVI TQDGVFTQTLLTEDTKARLALRILDESNGRVLLESVLSRQLHDPALTQEASDRGVAQL LKDFPSRSQP" misc_feature 5292150..5292536 /locus_tag="PA4712" /note="Domain of unknown function (DUF4136); Region: DUF4136; pfam13590" /db_xref="CDD:463929" gene complement(5292558..5293007) /locus_tag="PA4713" /db_xref="GeneID:881560" CDS complement(5292558..5293007) /locus_tag="PA4713" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253401.1" /db_xref="GeneID:881560" /translation="MLFARLVLLVQALVWGALGVLYWVRPYEMANLSGMLLMEPSAVS DARVFYGGHQFALALFLLFALRRASLVQPALILVVLLQSILTLSRLLIAWIEGGMEAD GNLFGLLFRGAMAALGIAALWWLQRRPPRLSAPGESAERREDDFDGL" gene 5293257..5293706 /locus_tag="PA4714" /db_xref="GeneID:881568" CDS 5293257..5293706 /locus_tag="PA4714" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253402.1" /db_xref="GeneID:881568" /translation="MRRFAPLAVLAATLLHGSLVQAAEPLAIDVHRDANCGCCKDWIK HLEANGFKVTDHVEADMSAVKSRLGVPYSMGSCHTGVIDGKFVEGHVPAADILKLRER ADLVGAAVPGMPVGSPGMEMGDRQDAYQVVGLTRSGQASVLAEYPGR" misc_feature 5293257..5293697 /locus_tag="PA4714" /note="Uncharacterized metal-binding protein, DUF411 family [Function unknown]; Region: COG3019" /db_xref="CDD:442256" gene complement(5293765..5295000) /locus_tag="PA4715" /db_xref="GeneID:881569" CDS complement(5293765..5295000) /locus_tag="PA4715" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_253403.1" /db_xref="GeneID:881569" /translation="MAESRPARRFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMG NPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAI VTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNE LERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVY DGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYG TFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAGWMVENPKASMYVWAKI PEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKA MFRADGLLSPQRKVDSLAE" misc_feature complement(5293795..5294979) /locus_tag="PA4715" /note="aminotransferase; Validated; Region: PRK08175" /db_xref="CDD:181268" gene 5295170..5296024 /locus_tag="PA4716" /db_xref="GeneID:881573" CDS 5295170..5296024 /locus_tag="PA4716" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253404.1" /db_xref="GeneID:881573" /translation="MSRRYWQLDVFAERPLTGNGLAVFDDASALDDAAMQAWTRELRQ FESIFLLPGDDPRAFRARIFTLEEELPFAGHPLLGAAALLHHLRGGDNEQHWTLHLAS KSVALRSVRAGSGFYAEMDQGRAEFGATPDAGTCRWFAEAFSLSANDLSGHPPRVVST GLPYLLLPVTAEALGRARQVNDLQEALDKLGAAFVYLLDVDGREGRTWDNLGLVEDVA TGSAAGPVAAYLVEYGLAARGEPFVLHQGRFLERPSRLDVQVATDGSVRVGGHVQLLA RAELLTSA" misc_feature 5295170..5296012 /locus_tag="PA4716" /note="Predicted epimerase YddE/YHI9, PhzF superfamily [General function prediction only]; Region: YHI9; COG0384" /db_xref="CDD:440153" gene 5296092..5296985 /locus_tag="PA4717" /db_xref="GeneID:881574" CDS 5296092..5296985 /locus_tag="PA4717" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253405.1" /db_xref="GeneID:881574" /translation="MLWRKGRRSDNVIDARGEGGAGGGGGMRIGGKGLSLGGVAIVVV VGLLMGQDPMQILGSLLGQMDSPAPATQQQAGGRAPAANDEQSEFVRSILGDTEDTWE QIFASGQAQYQQPKLVLFSNGVNSACGFASSATGPFYCPADRRVYLDLEFFREMEQRF SAAGDFAQAYVIAHEVGHHVQNLMGISAKINAARQRGARMEGANGLSVRQELQADCFA GVWANRAQQRLNWLEPGDIEEALNAANAIGDDRLQRQGRGMVVPDSFTHGSSAQRMRW FKTGFESGSPASCDTFKAQTL" misc_feature 5296092..5296967 /locus_tag="PA4717" /note="Putative neutral zinc metallopeptidase; Region: Zn_peptidase; pfam04228" /db_xref="CDD:427802" gene complement(5297007..5297483) /locus_tag="PA4718" /db_xref="GeneID:881580" CDS complement(5297007..5297483) /locus_tag="PA4718" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253406.1" /db_xref="GeneID:881580" /translation="MKRSKLALLPLGLALLLAACASDPLPIPQHSFGVYATASTPSAA FRTLADPQGKAMLVALKPSLTQADVLRAEVLYDQNGRPGVEVTFTEPAARRLAALTGE ARGRTLAVLVDGRLRLAPRVREPIRNGKVYLDGLASVYEARELADQLNALGSQPGR" misc_feature complement(<5297031..>5297348) /locus_tag="PA4718" /note="Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular transport]; Region: SecD; COG0342" /db_xref="CDD:440111" gene 5297897..5299192 /locus_tag="PA4719" /db_xref="GeneID:881581" CDS 5297897..5299192 /locus_tag="PA4719" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_253407.1" /db_xref="GeneID:881581" /translation="MLEKLFQLKAHNTTVRTEILAGITTFLTMAYILFVNPSILGETG MDKGAVFVATCLAAAIGSTIMGLIANYPIALAPGMGLNAFFTYTVVLHMGHSWQVALG AVFISATMFFLLSIFRIREWIINSIPLPLRSAIAAGIGLFLALIALQNAGIVVDNPAT LIGMGDLTKPAPILATLGFILIVALEARSVTGAVLIGILVVTAIAILLGVTQFGGVVS MPPSLAPTFLQLDIKGALDIGLVSVIFAFLFVDLFDNSGTLIGVAKRAGLMGKDGHMP KMGRALIADSTAAMGGSLLGTSTTTSYIESAAGVSAGGRTGLTAIVVAILFLLALFFA PLAGSVPAFATAPALLFVAVLMASGLAEIDWEDITVAAPVVVTALAMPFTYSIATGIA FGFISWTAIKVLSGRWRELNPALVILSVLFVIKLGFFNA" misc_feature 5297897..5299183 /locus_tag="PA4719" /note="Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 (NCS2) family [Nucleotide transport and metabolism]; Region: NCS2; COG2252" /db_xref="CDD:441853" gene 5299189..5300280 /gene="trmA" /locus_tag="PA4720" /db_xref="GeneID:881587" CDS 5299189..5300280 /gene="trmA" /locus_tag="PA4720" /EC_number="2.1.1.35" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tRNA (uracil-5-)-methyltransferase" /protein_id="NP_253408.1" /db_xref="GeneID:881587" /translation="MSRPQFDPSAYAAQLEDKKSRLAGLLAPFAAPAPEVFESPREHY RLRAEFRLWRETGNEKRHYAMFEQGDKHTPILLEDFPIASRRINELMPRLKAAWADPA LGFKLFQVEFLTTLAGDALITLCYHRPIDDAWRQAAEKLAAELGVNLVGRSRGKRIVV GRDYVEEELSVAGRRFRYRQPEGAFTQPNGEVNQKMLGWAYEALGQRDDDLLELYCGN GNFTLPLATRVRKVLATEISKSSVNAALANLADNAVDNVSLVRLSAEELTQALNEVRP FRRLADIDLKSYAFGSVFVDPPRAGMDPDTCELARRFERILYISCNPETLAQNIAQLH DTHRISRCALFDQFPYTHHMESGVLLERR" misc_feature 5299189..5300277 /gene="trmA" /locus_tag="PA4720" /note="tRNA (uracil-5-)-methyltransferase; Validated; Region: PRK05031" /db_xref="CDD:235332" gene complement(5300314..5301021) /locus_tag="PA4721" /db_xref="GeneID:881588" CDS complement(5300314..5301021) /locus_tag="PA4721" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="sugar fermentation stimulation protein A" /protein_id="NP_253409.1" /db_xref="GeneID:881588" /translation="MRFEQPLEEGRLLRRYKRFLADIESAGGERLTIHCPNTGSMLNC MSEGCRVWFSRSNDPKRKLPGTWELSETPQGRLACVNTARANRLVEEALLAGDIAELA GFTALRREVAYGVENSRADFRLEYPTGALFIEVKSVTLGFDETAVAAFPDAVTLRGAK HLRELAALAREGIRAVQLYCVNLSGVEAVRPADEIDPAYGKALREAAQAGVEVLAYGA EVTTEGLNLARRLPVRL" misc_feature complement(5300317..5301021) /locus_tag="PA4721" /note="DNA-binding protein, stimulates sugar fermentation [Carbohydrate transport and metabolism, Signal transduction mechanisms]; Region: SfsA; COG1489" /db_xref="CDD:441098" gene complement(5301021..5302193) /locus_tag="PA4722" /db_xref="GeneID:881593" CDS complement(5301021..5302193) /locus_tag="PA4722" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253410.1" /db_xref="GeneID:881593" /translation="MATSYSARSRAIEPFHVMALLARANELQAAGHDVIHLEIGEPDF TTAEPIVEAGRAALAAGHTRYTAARGLPALREAIAKFYGERYGVDLDPQRVLVTPGGS GALLLASSLLVDPGRHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPDLIER HWDSDSVGALVATPANPTGTLLDRDELAGLSGALKARGGHLVVDEIYHGLTYGVDAAS VLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPTAAVPELEKLAQNLYISAPSMAQQAAL ACFEPTTIAILEERREEFARRRDFLLPALRELGFGIAVEPEGAFYLYADISAFGGDAY AFCKHFIETEHVAFTPGLDFGRHQAGHHVRFAYTQNLPRLQEAVERIARGLKNWRP" misc_feature complement(5301033..5302193) /locus_tag="PA4722" /note="pyridoxal phosphate-dependent aminotransferase; Region: PRK08960" /db_xref="CDD:181595" gene 5302386..5302832 /gene="dksA" /locus_tag="PA4723" /db_xref="GeneID:881594" CDS 5302386..5302832 /gene="dksA" /locus_tag="PA4723" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="suppressor protein DksA" /protein_id="NP_253411.1" /db_xref="GeneID:881594" /translation="MSTKAKQQSSQQMTRGFEPYQETKGEEYMSERMRAHFTAILNKW KQELMEEVDRTVHHMQDEAANFPDPADRASQEEEFSLELRARDRERKLIKKIDETLQL IEDEEYGWCDSCGVEIGIRRLEARPTATLCIDCKTLAEIREKQLGS" misc_feature 5302431..5302826 /gene="dksA" /locus_tag="PA4723" /note="Prokaryotic dksA/traR C4-type zinc finger; Region: zf-dskA_traR; cl00755" /db_xref="CDD:445081" gene 5302900..5303781 /locus_tag="PA4724" /db_xref="GeneID:881601" CDS 5302900..5303781 /locus_tag="PA4724" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutamyl-Q tRNA(Asp) synthetase" /protein_id="NP_253412.1" /db_xref="GeneID:881601" /translation="MTSSYVGRFAPTPSGYLHFGSLVAAVASYLDARAVGGRWLVRME DLDPPREVPGAQQAILETLERYGFEWDGAVERQSERFPAYAAVVEQLLRSGLAYACTC SRKQLEGFAGIYPGFCRDAGHAREDAAIRLRVPELEYRFVDRVQGEVRQHLGREVGDF VIQRRDGLYAYQLAVVLDDAWQGITDIVRGADLLDSTPRQLYLQELLGLSQPRYLHVP LIVQPDGHKLGKSYRSPPLPAEQAAAPLTRALRALGQRPPAELAQASASEALAWGVAH WDATRIPRCATLPEERL" misc_feature 5302900..5303769 /locus_tag="PA4724" /note="tRNA glutamyl-Q(34) synthetase GluQRS; Region: PRK05710" /db_xref="CDD:235573" misc_feature order(5302951..5302953,5302960..5302962,5303587..5303589) /locus_tag="PA4724" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:173912" misc_feature 5302951..5302962 /locus_tag="PA4724" /note="HIGH motif; other site" /db_xref="CDD:173912" gene 5303851..5304027 /locus_tag="PA4724.1" /db_xref="GeneID:9793393" CDS 5303851..5304027 /locus_tag="PA4724.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_003933613.1" /db_xref="GeneID:9793393" /translation="MYIYRLVLLLVVGIYLFSPAIMDWWIDPNGAWYRPYLLWLILIV VTFILQSQRDADEL" gene 5304011..5306962 /gene="cbrA" /locus_tag="PA4725" /db_xref="GeneID:881602" CDS 5304011..5306962 /gene="cbrA" /locus_tag="PA4725" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component sensor CbrA" /protein_id="NP_253413.1" /db_xref="GeneID:881602" /translation="MLTSFSLTQLILISVTYLSTLFGIAWITERGYVPRRLVRHPLVY TLSLGVYASAWAFYGTVGLAYQYGYGFLAIYLGISGAFLLAPVLLYPILRVTRAYQLS SLADLFAFRFRSTWAGALTTLFMLIGVLPMLALQIQAVTDSISILTRDPAQERVAFVF CTLITLFAILFGARHIATRERHEGLVFAIAFESLVKLVMLGSIGLYALYGVFGGPEGL EVWLLQNQTALTTLHTPLAEGPWRTLLLVFFAAAIVMPHMFHMIFTENLNPRALISAS WGLPLFLLLMSLAVPPILWAGLRLGASTTPEYYTIGLGLAVDSPALALAAFIGGISAA SGLTIVMTLALSGMVLNHLVLPLYQPPAQGNIYRWLKWTRRLLIVAIIMASYAFYLLL GAEQDLSNLGIVSFVATLQFLPGALSVLYWPTANRRGFISGLIAGMLVWAITMLLPLM GNVQGLYLPLFDVIYVLDDSNWHLAALSSLAANVLVFTLVSLFTEASDEEKGAAEACA VDNVRRPQRRELFAGSPQEFASQLAKPLGAKTAQKEVEQALRDLHLPFDERRPYALRR LRDRIEANLSGLMGPSVAQDIVETFLPYKTSEESYVTEDIHFIESRLEDYHSRLTGLA AELDTLRRYHRQTLQDLPMGVCSLAKDQEVLMWNRAIEELTGVGAQKVVGSRLSALPE PWKGLLERFIDAPDEHLHKQRLVYDGHTRWLNLHKAAIEEPLAPGNSGLVLLVEDLTE TQLLEDKLVHSERLASIGRLAAGVAHEIGNPITGIACLAQNLREEREGDGELTEISEQ ILDQTKRVSRIVQSLMSFAHSGSHLQALEPVCLSEVAQEAIGLLSLNRRSVEVEFFNL CDPAHWVEGDSQRLAQVLINLLSNARDASPPGGAIRVRSEASEHTVDLVVEDEGSGIP KAIMDQLFEPFFTTKDPGKGTGLGLALVYSIVEEHYGQITIESPTDHQREGGTRFRVT LPRHPGPTAEL" misc_feature 5304041..5305483 /gene="cbrA" /locus_tag="PA4725" /note="Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain; Region: SLC5sbd; cd10322" /db_xref="CDD:271357" misc_feature order(5304155..5304157,5304164..5304166,5305007..5305009, 5305016..5305021) /gene="cbrA" /locus_tag="PA4725" /note="Na binding site [ion binding]; other site" /db_xref="CDD:271357" misc_feature 5305865..5306947 /gene="cbrA" /locus_tag="PA4725" /note="Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms]; Region: NtrY; COG5000" /db_xref="CDD:444024" gene 5306989..5308425 /gene="cbrB" /locus_tag="PA4726" /db_xref="GeneID:881609" CDS 5306989..5308425 /gene="cbrB" /locus_tag="PA4726" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component response regulator CbrB" /protein_id="NP_253414.1" /db_xref="GeneID:881609" /translation="MAHILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERYTIP SFDMVVSDLRLPGAPGTELIKLAEGIPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDH DEMLQAVARILKDRQENRSAAPVSANGGKAGGERGASPAVADGEIGIIGSCAPMQELY SKIRKVAPTDSTVLIQGESGTGKELVARALHNLSKRAKAPLISVNCAAIPETLIESEL FGHEKGAFTGASAGRAGLVEAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSV QSQKVDVRLIAATHRDLKTLAKTGQFREDLYYRLHVISLKLPALRERGNDVMEIARAF LARQCTRMGRAPLSFAHDAEQAIRHYPWPGNVRELENAIERAVILSESQEIHADLLGI DIELDDLEDDFAADLGLGPAGAAASNHEPTEDLSLEDYFQHFVLEHQDHMTETELARK LGISRKCLWERRQRLGIPRRKSGASADS" misc_feature 5306989..5308386 /gene="cbrB" /locus_tag="PA4726" /note="DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]; Region: AtoC; COG2204" /db_xref="CDD:441806" gene 5308433..5308493 /locus_tag="PA4726.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965622" ncRNA 5308433..5308493 /ncRNA_class="other" /locus_tag="PA4726.1" /product="P36" /db_xref="GeneID:6965622" protein_bind 5308572..5308585 /experiment="ChIP-PCR [PMID: 24157832]" /experiment="ChIP-Seq [PMID: 24157832]" /experiment="qPCR [quantitative real-time] [PMID: 24157832]" /experiment="RNA-Seq [PMID: 24157832]" /note="Transcription factor binding site for NP_252798." /bound_moiety="AmpR" gene 5308587..5308993 /gene="crcZ" /locus_tag="PA4726.11" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /db_xref="GeneID:9793394" ncRNA 5308587..5308993 /ncRNA_class="other" /gene="crcZ" /locus_tag="PA4726.11" /product="CrcZ" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:9793394" gene complement(5308743..5308964) /locus_tag="PA4726.2" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965628" ncRNA complement(5308743..5308964) /ncRNA_class="other" /locus_tag="PA4726.2" /product="P30" /db_xref="GeneID:6965628" gene 5309326..5310729 /gene="pcnB" /locus_tag="PA4727" /db_xref="GeneID:881610" CDS 5309326..5310729 /gene="pcnB" /locus_tag="PA4727" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="poly(A) polymerase" /protein_id="NP_253415.1" /db_xref="GeneID:881610" /translation="MLKKLIQTIRSPLRRPRAVRTTPEVIGNNQHSLRRDQFSRNAVK VVEILQRAGYQAYVVGGCVRDQMLGIAPKDFDVATSATPEQVRAEFRNARIIGRRFKL VHVHFGREIIEVATFRAHHPEGQDDGDSRASSNESGRILRDNVYGSLEDDAQRRDFTI NALYFDVTSERLLDYANGVHDIRNRLIRLIGDPEQRYLEDPVRMLRAVRFAAKLDFEI EKHSAAPIRRLAPLLREIPSARLFDEVLKLFLAGRAERTFELLVEYELFAPLFPASAK ALQANPDYTGKLIRQALANTDARIRQGKPVTPAFLFAALLWPALPARVAQLQEKGMPA IPAMQEAAHELISEQCQRIAIPKRFTLPIREIWDMQERLPRRQGKRADLLLENPRFRA GYDFLLLRESAGEETEGLGQWWTDYQEVSDSERRNMIRDLVSQEDGSAPRKRRRGGNS GRRRRGPRKEGSGGSGE" misc_feature 5309398..5310615 /gene="pcnB" /locus_tag="PA4727" /note="poly(A) polymerase; Region: pcnB; TIGR01942" /db_xref="CDD:130997" gene 5310726..5311214 /gene="folK" /locus_tag="PA4728" /db_xref="GeneID:881616" CDS 5310726..5311214 /gene="folK" /locus_tag="PA4728" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase" /protein_id="NP_253416.1" /db_xref="GeneID:881616" /translation="MIQRVYVALGSNLAEPREQIQAALDAFERLPETRLVAVSPLYIS DPLGPADQPRFVNGVAALDTNLAPLDLLDALQAIELEQGRVRDLRWGPRTLDLDILLF GEQLLDLPRLKVPHYHMQARAFVLYPLADLAPDLRLPDGRHLPELLAACPFEGIERLP GA" misc_feature 5310735..5311181 /gene="folK" /locus_tag="PA4728" /note="7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (folate biosynthesis) [Coenzyme transport and metabolism]; Region: FolK; COG0801" /db_xref="CDD:440564" gene 5311464..5312264 /gene="panB" /locus_tag="PA4729" /db_xref="GeneID:881621" CDS 5311464..5312264 /gene="panB" /locus_tag="PA4729" /EC_number="2.1.2.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-methyl-2-oxobutanoate hydroxymethyltransferase" /protein_id="NP_253417.1" /db_xref="GeneID:881621" /translation="MPDVTLTTLQGLKQSGEKIAMLTCYDATFAHTASQAGVDVLLVG DSLGMVLQGHDSTLPVSNEEMAYHTACVKRGNKGSLIVTDLAFESSHSVAQTLADAVR LMQAGAHMVKLEGGVWLAEPIARLAQMGVPVCAHLGLTPQAVNLFGGFKVQGRQETQA RQLRADAIALEQAGAAMLLLECVPSVLAEEITQAVKIPVIGIGAGAATDGQVLVMHDM LGLSLTGRSPKFVKDFMQGQESIPAAIAAYVRAVKDVSFPAAEHGFNA" misc_feature 5311473..5312258 /gene="panB" /locus_tag="PA4729" /note="3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed; Region: panB; PRK00311" /db_xref="CDD:234723" gene 5312261..5313112 /gene="panC" /locus_tag="PA4730" /db_xref="GeneID:881622" CDS 5312261..5313112 /gene="panC" /locus_tag="PA4730" /EC_number="6.3.2.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="pantoate--beta-alanine ligase" /protein_id="NP_253418.1" /db_xref="GeneID:881622" /translation="MNTVKTVRELRAAVARARSEGKRIGFVPTMGNLHAGHAALVKKA GERADFVVVSIFVNPLQFGPSEDLDTYPRTLAADQERLLEAGCHLLFTPTVEEMYPDG MDGQTRIHVPGVSEGLCGASRPGHFEGVATVVSKLLNMVQPDLALFGEKDFQQLAVIR KLVRDLNLPVQIFGEPTVRAADGLALSSRNGYLDEQQRAAAPAIYRTLRQLGERIRAG AEDFPALLADARQALEQAGLRPDYLEIREPISLRPGVPGDRQLVILAAAYLGSTRLID NLSVHLD" misc_feature 5312261..5313100 /gene="panC" /locus_tag="PA4730" /note="Panthothenate synthetase [Coenzyme transport and metabolism]; Region: PanC; COG0414" /db_xref="CDD:440183" gene 5313206..5313586 /gene="panD" /locus_tag="PA4731" /db_xref="GeneID:881637" CDS 5313206..5313586 /gene="panD" /locus_tag="PA4731" /EC_number="4.1.1.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aspartate alpha-decarboxylase" /protein_id="NP_253419.1" /db_xref="GeneID:881637" /translation="MHAIMLKAKLHRAEVTHAVLDYEGSCAIDGDWLDLSGIREYEQI QIYNIDNGERFTTYAIRAENGSKMISVNGAAAHKAKVGDRVIICAYAHYSEAELASHK PRMLYMAPGNQLSHTSEAIPIQVA" misc_feature 5313206..5313562 /gene="panD" /locus_tag="PA4731" /note="Aspartate 1-decarboxylase [Coenzyme transport and metabolism]; Region: PanD; COG0853" /db_xref="CDD:440614" gene 5313676..5315340 /gene="pgi" /locus_tag="PA4732" /db_xref="GeneID:881638" CDS 5313676..5315340 /gene="pgi" /locus_tag="PA4732" /EC_number="5.3.1.9" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate isomerase" /protein_id="NP_253420.1" /db_xref="GeneID:881638" /translation="MKHHLTPLDATQLDSWRALAAHRQELQDFRMRQAFIDDPERFKR FSFSACGLFLDFSKNLIRQDTIDLLVKLAEEARLSDAIRAMFDGEAINASERRPVLHT ALRRPIGDKVLVDGVDVMPEVHRVLHQMTELVGYVHNGLWRGYTEKPITDVVNIGIGG SFLGPQLVSEALLPFAQKGVRCHYLANIDGSEFHELASRLNAETTLFIVSSKSFGTLE TLKNAQAARAWYLAQGGTEEELYRHFIAVSSNKEAAIAFGIREENIFPMWDWVGGRYS LWSAIGLPIAMSIGISNFKELLSGAYNMDQHFQTAPFERNIPVLLGLLGVWYGDFWGA NSHAILPYDYYLRNITDHLQQLDMESNGKSVRQDGTPVTSGTGPVIWGGVGCNGQHAY HQLLHQGTQLIPADFIVPVSSYNPVADHHQWLYANCLSQSQALMLGKSREEAEAELRA KGLPEAEVQRLAPHKVIPGNRPSNTLVVERISARRLGALIAMYEHKVYVQSILWGINA FDQWGVELGKELGKGVYSRLVGSEETPAEDASTQGLIDFFRGRHRG" misc_feature 5313691..5315334 /gene="pgi" /locus_tag="PA4732" /note="glucose-6-phosphate isomerase; Reviewed; Region: pgi; PRK00179" /db_xref="CDD:234679" gene 5315534..5317471 /gene="acsB" /locus_tag="PA4733" /db_xref="GeneID:881650" CDS 5315534..5317471 /gene="acsB" /locus_tag="PA4733" /EC_number="6.2.1.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="acetyl-CoA synthetase" /protein_id="NP_253421.1" /db_xref="GeneID:881650" /translation="MFEISVHPVPDAVRQRAYLNDDDYQRLYRQSVENPDEFWGEQAK AFLDWFKPWHSVHHGDLRKGQATWFKGGQLNVAYNCIDRHLERRGEQIAIVWEGDNPS ESAHITYRKLHHNVCRLANVLKSRGVEKGDRVCIYMPMIPEAAYAMLACARIGAVHSV VFGGFSPDSLRDRILDADCRTVITADEGVRGGKYIPLKQNVEKALKDCPDVSTVVVVE RTQGDIPWVEGRDIWYHEALHAASADCPAEAMDAEDPLFILYTSGSTGKPKGVLHTTG GYLLGAAMTHKYVFDYHDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYP DASRFWQVIDKHQVNIFYTAPTAIRALMREGDAPVRQTSRSSLRLLGSVGEPINPEAW EWYYQVVGEKRCPILDTWWQTETGSILITPLPGATALKPGSATRPFFGVQPVLLDEKG KEIDGAGSGVLAIKASWPSQIRSVYGDHQRMIDTYFKPYPGYYFSGDGARRDEDGYYW ITGRVDDVINVSGHRIGTAEVESALVLHDAVAEAAVVGCPHDVKGQAIYAFVTLMAGS QPSEALQQELLALVGKEIGSFAKPDHLQWAPSLPKTRSGKIMRRILRKIACNELDSLG DTSTLADPGVVQGLIDNRLNR" misc_feature 5315549..5317468 /gene="acsB" /locus_tag="PA4733" /note="acetyl-CoA synthetase; Provisional; Region: PRK00174" /db_xref="CDD:234677" misc_feature order(5316017..5316025,5316101..5316103,5316110..5316112, 5316116..5316118,5316437..5316439,5316452..5316457, 5316521..5316529,5316599..5316604,5316611..5316613, 5316680..5316691,5316755..5316772,5317022..5317024, 5317058..5317060,5317067..5317069,5317091..5317102, 5317274..5317276,5317289..5317294) /gene="acsB" /locus_tag="PA4733" /note="active site" /db_xref="CDD:341270" misc_feature order(5316017..5316025,5316101..5316103,5316110..5316112, 5316116..5316118,5316437..5316439,5316455..5316457, 5316521..5316529,5316599..5316604,5316611..5316613, 5317091..5317099,5317274..5317276,5317289..5317291) /gene="acsB" /locus_tag="PA4733" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:341270" misc_feature order(5316305..5316307,5316314..5316331,5316335..5316340) /gene="acsB" /locus_tag="PA4733" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341270" misc_feature order(5316452..5316457,5316680..5316691,5316755..5316772, 5317022..5317024,5317058..5317060,5317067..5317069, 5317100..5317102) /gene="acsB" /locus_tag="PA4733" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341270" misc_feature order(5316452..5316457,5316680..5316685,5316764..5316766) /gene="acsB" /locus_tag="PA4733" /note="acetate binding site [chemical binding]; other site" /db_xref="CDD:341270" gene 5317569..5318450 /locus_tag="PA4734" /db_xref="GeneID:881651" CDS 5317569..5318450 /locus_tag="PA4734" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253422.1" /db_xref="GeneID:881651" /translation="MESVRRHIESQVLSLTGLAVGGVDFESPKGDPGLFGPDAACWKV HGDFSSMMIGGIGALLLQMLHPLALAGVWDHSNFRDDLLGRLRRTGQFISATTYGPLA DAERLIERVRRIHESVIGQLPDGTPYSASDPDLLTWVHVAEVSSFLKSYLRYLNPDLP GSEQDRYYSEIALVAERLGARAVPRDRQQIAAYLEAMRPRLRCDERTREVVRILFNAP APSTLARPFGALMLRAGAELLPEWAGSMLDLPFSPLQRRLIRGSVRRSVPLLRWAVRN ASMHRACRRMGLPPVSH" misc_feature 5317623..5318441 /locus_tag="PA4734" /note="Uncharacterized conserved protein, DUF2236 family [Function unknown]; Region: COG3662" /db_xref="CDD:442879" gene 5318575..5321841 /locus_tag="PA4735" /db_xref="GeneID:881654" CDS 5318575..5321841 /locus_tag="PA4735" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253423.1" /db_xref="GeneID:881654" /translation="MPKGLKRAVSALLITFLVYCLLGFLLIPGIGLRVANQQLAQYAT VPARLERIEFNPFSLELTLWGLRLGEEKNPQLAFRRLYANLQLDSLWKRQLHLADVEL EGPHTELLFGEKGQLNLASLFRIPPSESPEPEQPSDPFPLRIDRIQLAEGSLHFQDLR PSEPVDFSFDPLGFELHNLSTLPDDGAKMTLVATGPNGGRLDWEGDLTLVPITSRGHL SVKDIQLKAWWPYVRDNAPLVLENGVVSLSSDYRLDLSKDTQLLLDKAALKLADFSIN SPQGKPLAKLASLDVAATTLDLAKQEVVLGEVRSQGLEAWAAREKDGQLDWQKLFADF TPPPRKAPAPKPAENTDPAAAPTDAAKTTSEPATDGAAKAAAIASGEASKDRPAEKDA SVAETERATDDKESAKAAEGAADKVAKQETSKAPKTGKATGQETAKTAEIDKAASDSP QQLADTAKTPPPESTKASAETPAKPWNIVLRDAQLRGYKAHLVDRQPATEVPLEVGPL DLDLQNVDSLGKTPFDLKLKTGLGNRGQVQASGQVVLDPVSARLKVSTRDIDLRVAQA YISPFIRLELRSGFLGSELAVDLKSVEPLAFSVDGSAEVSQLHTLDTIKDRDFVKWTK LTLNGLAYRHEDSLSIQSVSFEEPYARFIINEDRSTNVSELIIPQPASSSGKTAAESK NAPASKPLGIHIGGVRINNGSANFADLTLMPPFGTAIQQLSGEVGTLDTRNSQPAKVD IKGKVDKYAPVTIAGELDPFDPLKKLDITTSFKRVELTTLTPYSGKFAGYRIRKGRLN LDLHYQIERSQLKAENKVLLEGLQLGEKVDSPDAVDLPVKLAVALLKDTKGNIDIQLP VAGDLNNPEFSVMPIVWQTLRNLVLRAVQAPFKFIAGLAAGGNEDLGTVPFAAGSDEL TPEAQANLDKLADALKERPALRLEVEGVASAAADGPSIGAKRLELEYQNTYYRMLQRR GDKVPSDAKQLEVPENMQAPLLEGIYRTRLKQQPPAEWKELDSDERTAKMREAVIASW AKSQVLLRQIGQARATRIKDYLVEKGQLPDDRIYLIDVSFAEGEDKGNVDTQLHLDSE " misc_feature 5318578..>5319564 /locus_tag="PA4735" /note="Uncharacterized conserved protein YhdP, contains DUF3971 and AsmA2 domains [Function unknown]; Region: YhdR; COG3164" /db_xref="CDD:442397" misc_feature 5318992..>5319333 /locus_tag="PA4735" /note="Domain of Unknown Function (DUF748); Region: DUF748; pfam05359" /db_xref="CDD:461629" misc_feature <5319670..5319996 /locus_tag="PA4735" /note="adenylate kinase; Provisional; Region: PRK13808" /db_xref="CDD:172341" misc_feature 5320000..5320455 /locus_tag="PA4735" /note="Domain of Unknown Function (DUF748); Region: DUF748; pfam05359" /db_xref="CDD:461629" misc_feature 5320648..5321097 /locus_tag="PA4735" /note="Domain of Unknown Function (DUF748); Region: DUF748; pfam05359" /db_xref="CDD:461629" misc_feature 5320819..>5321397 /locus_tag="PA4735" /note="Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall/membrane/envelope biogenesis]; Region: OmpA; COG2885" /db_xref="CDD:442131" gene 5321846..5322139 /locus_tag="PA4736" /db_xref="GeneID:881655" CDS 5321846..5322139 /locus_tag="PA4736" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253424.1" /db_xref="GeneID:881655" /translation="MHKRFAALAAPLLYLACASAQADTMRCGSALVSVGDRAFEVQQK CGDPDHRDDVGYTLGSYDRREFKVEEWVYGPRNGVTYILTFEANKLKRIEFKR" misc_feature 5321909..5322127 /locus_tag="PA4736" /note="Protein of unknown function (DUF2845); Region: DUF2845; pfam11006" /db_xref="CDD:431599" gene 5322136..5322450 /locus_tag="PA4737" /db_xref="GeneID:881663" CDS 5322136..5322450 /locus_tag="PA4737" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253425.2" /db_xref="GeneID:881663" /translation="MNRSLPRTGLVALLSLLPLAHAQADSLRCGSRLVSTGDSSADVL ARCGEPRSRDSLGYREVVGEWGKRYEVEVQEWVYGPWNGMLYFVRFEGNRLSAIQSRR GD" misc_feature 5322205..5322435 /locus_tag="PA4737" /note="Protein of unknown function (DUF2845); Region: DUF2845; pfam11006" /db_xref="CDD:431599" gene complement(5322510..5322707) /locus_tag="PA4738" /db_xref="GeneID:881664" CDS complement(5322510..5322707) /locus_tag="PA4738" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253426.1" /db_xref="GeneID:881664" /translation="MNSDVIKGKWKQLTGKIKERWGDLTDDDLQAADGHAEYLVGKLQ ERYGWSKERAEQEVRDFSDRL" misc_feature complement(5322513..5322707) /locus_tag="PA4738" /note="Uncharacterized conserved protein YjbJ, UPF0337 family [Function unknown]; Region: yjbJ; COG3237" /db_xref="CDD:442469" gene complement(5322757..5323101) /locus_tag="PA4739" /db_xref="GeneID:881670" CDS complement(5322757..5323101) /locus_tag="PA4739" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253427.1" /db_xref="GeneID:881670" /translation="MKFSKLAIAAATATALSFSMANAFAAQPISLAANDTMQKTEEAV SDTWITSKVKSSLIANKNVSGVDIKVETNKGVVSLSGNVKSDAERDLAIETAKGIKGV KAVSADGLKSVE" misc_feature complement(<5322787..5323011) /locus_tag="PA4739" /note="Osmotically-inducible protein OsmY, contains BON domain [Cell wall/membrane/envelope biogenesis]; Region: OsmY; COG2823" /db_xref="CDD:442071" gene complement(5323374..5325479) /gene="pnp" /locus_tag="PA4740" /db_xref="GeneID:881671" CDS complement(5323374..5325479) /gene="pnp" /locus_tag="PA4740" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="polynucleotide phosphorylase" /protein_id="NP_253428.1" /db_xref="GeneID:881671" /translation="MNPVTKQFQFGQSTVTLETGRIARQATGAVLVTMDDVSVLVTVV GAKSPAEGRDFFPLSVHYQEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLF PEGFMNEVQVVCTVVSTNKKSDPDIAAMIGTSAALAISGIPFAGPIGAARVGFHPEIG YILNPTYEQLQSSSLDMVVAGTEDAVLMVESEADELTEDQMLGAVLFAHDEFQAVIRA VKELAAEAGKPAWDWKAPAENTVLVNAIKAELGEAISQAYTITIKQDRYNRLGELRDQ AVALFAGEEEGKFPASEVKDVFGLLEYRTVRENIVNGKPRIDGRDTRTVRPLRIEVGV LGKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGERKDAFMLHYNFPPFSVGECG RMGSPGRREIGHGRLARRGVAAMLPTQDEFPYTIRVVSEITESNGSSSMASVCGASLA LMDAGVPVKAPVAGIAMGLVKEGEKFAVLTDILGDEDHLGDMDFKVAGTDKGVTALQM DIKINGITEEIMEIALGQALEARLNILGQMNQVIAKPRAELSENAPTMLQMKIDSDKI RDVIGKGGATIRGICEETKASIDIEDDGSVKIYGETKEAAEAAKLRVLAITAEAEIGK IYVGKVERIVDFGAFVNILPGKDGLVHISQISDKRIDKVTDVLQEGQEVKVLVLDVDN RGRIKLSIKDVAAAEASGV" misc_feature complement(5323401..5325479) /gene="pnp" /locus_tag="PA4740" /note="polynucleotide phosphorylase/polyadenylase; Provisional; Region: PRK11824" /db_xref="CDD:236995" gene complement(5325653..5325922) /gene="rpsO" /locus_tag="PA4741" /db_xref="GeneID:881675" CDS complement(5325653..5325922) /gene="rpsO" /locus_tag="PA4741" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S15" /protein_id="NP_253429.1" /db_xref="GeneID:881675" /translation="MALSVEEKAQIVNEYKQAEGDTGSPEVQVALLSANINKLQDHFK ANGKDHHSRRGLIRMVNQRRKLLDYLKGKDVSRYTALIGRLGLRR" misc_feature complement(5325656..5325922) /gene="rpsO" /locus_tag="PA4741" /note="30S ribosomal protein S15; Reviewed; Region: rpsO; PRK05626" /db_xref="CDD:180170" misc_feature complement(order(5325716..5325718,5325728..5325730, 5325767..5325772,5325776..5325781,5325785..5325787, 5325797..5325799,5325806..5325808,5325818..5325820, 5325839..5325841,5325848..5325850,5325899..5325901)) /gene="rpsO" /locus_tag="PA4741" /note="16S/18S rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:238213" misc_feature complement(order(5325671..5325673,5325683..5325685, 5325803..5325805,5325812..5325814,5325821..5325826, 5325833..5325835)) /gene="rpsO" /locus_tag="PA4741" /note="S13e-L30e interaction site [polypeptide binding]; other site" /db_xref="CDD:238213" misc_feature complement(order(5325665..5325670,5325731..5325733, 5325743..5325745)) /gene="rpsO" /locus_tag="PA4741" /note="25S rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:238213" gene complement(5326018..5326932) /gene="truB" /locus_tag="PA4742" /db_xref="GeneID:881676" CDS complement(5326018..5326932) /gene="truB" /locus_tag="PA4742" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine synthase B" /protein_id="NP_253430.1" /db_xref="GeneID:881676" /translation="MAQVKRIRRSISGILVLDKPRGMSSNQALQKVRWLLNAEKAGHT GSLDPLATGVLPLCFGEATKFSQYLLDADKGYETVMRMGITTTTGDAEGELLAERDVT VGRDDLEQALPRFRGDIEQVPPMYSALKKDGQPLYKLARAGEVVEREARSVTITRLDL LSFEPPCATLAVSCSKGTYVRTLVEDLGQVLGCGAHVAALRRTQAGPFALAQAITLET LERVHAEGGPEALDQFLMPEDSGLLHWPVLQLSEHSAYYWLHGQPVRAPEAPKFGWLR VQDHTGRFIGIGEVTDDGRIAPRRLIRS" misc_feature complement(5326024..5326896) /gene="truB" /locus_tag="PA4742" /note="tRNA U55 pseudouridine synthase TruB, may also work on U342 of tmRNA [Translation, ribosomal structure and biogenesis]; Region: TruB; COG0130" /db_xref="CDD:439900" gene complement(5326935..5327324) /gene="rbfA" /locus_tag="PA4743" /db_xref="GeneID:881688" CDS complement(5326935..5327324) /gene="rbfA" /locus_tag="PA4743" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribosome-binding factor A" /protein_id="NP_253431.1" /db_xref="GeneID:881688" /translation="MAKDYSRTQRIGDQMQRELAQLIQREIKDPRLGLVTITGVEVSR DVAHAKVFITVMGQDDAGKIALNMEILNDAAGYLRMLLGKSMKLRSVPQLHFHYDESI RRGAELSALIERAVAEDGRRHGDETED" misc_feature complement(5326968..5327324) /gene="rbfA" /locus_tag="PA4743" /note="30S ribosome-binding factor RbfA; Region: rbfA; PRK00521" /db_xref="CDD:234787" gene complement(5327427..5329949) /gene="infB" /locus_tag="PA4744" /db_xref="GeneID:881695" CDS complement(5327427..5329949) /gene="infB" /locus_tag="PA4744" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-2" /protein_id="NP_253432.1" /db_xref="GeneID:881695" /translation="MTQVTVKELAQVVDTPVERLLLQMRDAGLPHTSAEQVVTDSEKQ ALLTHLKGSHGDRASEPRKITLQRKTTTTLKVGGSKTVSVEVRKKKTYVKRSPDEIEA ERQRELEEQRAAEEAERLKAEEAAARQRAEEEARKAEEAARAKAAQEAAATAGAEPAV VADVAVAEPVAKPAAVEERKKEEPRRVPKRDEDDDRRDRKHTQHRPSVKEKEKVPAPR VAPRSTDEESDGYRRGGRGGKSKLKKRNQHGFQNPTGPIVREVNIGETITVAELAAQM SVKGAEVVKFMFKMGSPVTINQVLDQETAQLVAEELGHKVKLVSENALEEQLAESLKF EGEAVTRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETERGMVT FLDTPGHAAFTAMRARGAQATDIVILVVAADDGVMPQTQEAVQHAKAAGVPIVVAVNK IDKPEANPDNIKNGLAALDVIPEEWGGDAPFVPVSAKLGTGVDELLEAVLLQAEVLEL KATPSAPGRGVVVESRLDKGRGPVATVLVQDGTLRQGDMVLVGINYGRVRAMLDENGK PIKEAGPSIPVEILGLDGTPDAGDEMTVVADEKKAREVALFRQGKFREVKLARAHAGK LENIFENMGQEEKKTLNIVLKADVRGSLEALQGSLSGLGNDEVQVRVVGGGVGGITES DANLALASNAVLFGFNVRADAGARKIVEAEGLDMRYYNVIYDIIEDVKKALTGMLGSD LRENILGIAEVRDVFRSPKFGAIAGCMVTEGMVHRNRPIRVLRDDVVIFEGELESLRR FKDDVAEVRAGMECGIGVKSYNDVKVGDKIEVFEKVEVARSL" misc_feature complement(5329791..5329949) /gene="infB" /locus_tag="PA4744" /note="Translation initiation factor IF-2, N-terminal region; Region: IF2_N; pfam04760" /db_xref="CDD:428110" misc_feature complement(5329665..5329769) /gene="infB" /locus_tag="PA4744" /note="Bacterial translation initiation factor IF-2 associated region; Region: IF2_assoc; pfam08364" /db_xref="CDD:429947" misc_feature complement(5329005..5329157) /gene="infB" /locus_tag="PA4744" /note="Translation initiation factor IF-2, N-terminal region; Region: IF2_N; pfam04760" /db_xref="CDD:428110" misc_feature complement(5327430..5328935) /gene="infB" /locus_tag="PA4744" /note="Translation initiation factor IF-2, a GTPase [Translation, ribosomal structure and biogenesis]; Region: InfB; COG0532" /db_xref="CDD:440298" gene complement(5329977..5331458) /gene="nusA" /locus_tag="PA4745" /db_xref="GeneID:881696" CDS complement(5329977..5331458) /gene="nusA" /locus_tag="PA4745" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcription elongation factor NusA" /protein_id="NP_253433.1" /db_xref="GeneID:881696" /translation="MSKEVLLVVESVSNEKGVPAGVIFEALELALATATKKRFEDEVD LRVEINRHNGSYETFRRWHVVADEDYQDPATEITVEDVQEQKPGAKVGEVIEEKIESI EFGRIAAQTAKQVIVQKVREAERAQVVDAYREKVGEIISGTVKKVTRDNVIVDLGNNA EALLARDQIIPRETFRVGTRVRALLKEIRTENRGPQLVLSRTAPEMLIELFRIEVPEI AEQLIDVMAAARDPGSRAKIAVRSKDKRIDPQGACIGMRGSRVQAVSGEIGGERVDIV LWDDNPAQFVINAMAPAEVAAIIVDEDTHTMDIAVAEDNLAQAIGRSGQNVRLASQLT GWTLNVMTEADIQAKQQAETGDILQRFVDELDVDEELAQVLVEEGFTTLEEIAYVPME EMLSIDGFDEDIVNELRSRAKDRLLTKAIATEEKLADAQPAEDLLSLDGMSKELALDL ALRGVTTREDLAEQSIDDLLDIDGMDEERAGKLIMAARAHWFE" misc_feature complement(5330025..5331458) /gene="nusA" /locus_tag="PA4745" /note="transcription elongation factor NusA; Validated; Region: nusA; PRK09202" /db_xref="CDD:236410" gene complement(5331503..5331961) /locus_tag="PA4746" /db_xref="GeneID:881700" CDS complement(5331503..5331961) /locus_tag="PA4746" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253434.1" /db_xref="GeneID:881700" /translation="MSSKLEQLQALLAPVVEALGYECWGVEFISQGRHSVLRVYIDRP EGILIDDCEAVSRQVSGILDVEDPISGEYTLEVSSPGMDRPLFTLEQFAKHAGEQVKI RLRSPYEGRRNYQGILRGVEEQDVVVLVDDHEYLLPIDSIDKANIIPRFD" misc_feature complement(5331509..5331961) /locus_tag="PA4746" /note="ribosome maturation protein RimP; Reviewed; Region: PRK00092" /db_xref="CDD:234627" misc_feature complement(order(5331524..5331541,5331545..5331550, 5331554..5331559,5331581..5331583,5331602..5331604, 5331620..5331622,5331626..5331628,5331647..5331649, 5331653..5331655)) /locus_tag="PA4746" /note="putative oligomer interface [polypeptide binding]; other site" /db_xref="CDD:212481" misc_feature complement(order(5331548..5331550,5331590..5331592, 5331596..5331598)) /locus_tag="PA4746" /note="putative RNA binding site [nucleotide binding]; other site" /db_xref="CDD:212481" gene complement(5332087..5332163) /locus_tag="PA4746.1" /db_xref="GeneID:3240250" tRNA complement(5332087..5332163) /locus_tag="PA4746.1" /product="tRNA-Met" /db_xref="GeneID:3240250" gene complement(5332254..5332339) /locus_tag="PA4746.2" /db_xref="GeneID:3240251" tRNA complement(5332254..5332339) /locus_tag="PA4746.2" /product="tRNA-Leu" /db_xref="GeneID:3240251" gene complement(5332354..5332743) /gene="secG" /locus_tag="PA4747" /db_xref="GeneID:881707" CDS complement(5332354..5332743) /gene="secG" /locus_tag="PA4747" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecG" /protein_id="NP_253435.1" /db_xref="GeneID:881707" /translation="MLEKVVIVVHLLMALGLVGLILVQHGKGADAGASFGAGASATVF GSQGSATFLSRITGILAAVFFLTSLGLAYFAKEKSDALQHIGLPDPAVLEQKQEKAPA ADDVPVLQEQSKPAESAGDVPAAPEQK" misc_feature complement(5332501..5332740) /gene="secG" /locus_tag="PA4747" /note="Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport]; Region: SecG; COG1314" /db_xref="CDD:440925" gene complement(5332746..5333501) /gene="tpiA" /locus_tag="PA4748" /db_xref="GeneID:881712" CDS complement(5332746..5333501) /gene="tpiA" /locus_tag="PA4748" /EC_number="5.3.1.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="triosephosphate isomerase" /protein_id="NP_253436.1" /db_xref="GeneID:881712" /translation="MRRPLVAGNWKMHGTHSSVAELIKGLRQLALPSGVDVAVMPPCL FISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLIL GESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFA RAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAENAEVAKGVRLLYGGSVKAASA AELFGMPDIDGGLVGGASLNADEFGAICRAAGS" misc_feature complement(5332755..5333498) /gene="tpiA" /locus_tag="PA4748" /note="triosephosphate isomerase; Provisional; Region: tpiA; PRK00042" /db_xref="CDD:234589" misc_feature complement(order(5332800..5332805,5332809..5332811, 5332866..5332868,5332983..5332985,5333001..5333003, 5333217..5333219,5333469..5333471,5333475..5333477)) /gene="tpiA" /locus_tag="PA4748" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238190" misc_feature complement(order(5333208..5333213,5333244..5333249, 5333256..5333258,5333313..5333315,5333352..5333354, 5333361..5333363,5333367..5333375,5333466..5333468, 5333475..5333477)) /gene="tpiA" /locus_tag="PA4748" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238190" misc_feature complement(order(5333001..5333003,5333217..5333219, 5333469..5333471)) /gene="tpiA" /locus_tag="PA4748" /note="catalytic triad [active]" /db_xref="CDD:238190" gene complement(5333567..5334904) /gene="glmM" /locus_tag="PA4749" /db_xref="GeneID:881713" CDS complement(5333567..5334904) /gene="glmM" /locus_tag="PA4749" /EC_number="5.4.2.10" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phosphoglucosamine mutase" /protein_id="NP_253437.1" /db_xref="GeneID:881713" /translation="MSRKYFGTDGIRGRVGEFPITPDFVLKLGWAVGMAFRRQGNCRV LIGKDTRSSGYMFESAFEAGLSASGADTLLLGPMPTPGIAYLTRTFHAEAGVVISASH NPHDDNGIKFFSGQGTKLPDDVELMIEELLDAPMTVVESARLGKVSRINDAAGRYIEF CKSSVPTSTDFNGLKVVLDCANGATYKIAPSVFRELGAEVTVLAASPNGLNINDKCGS THLDGLQAAVVEHHADLGIAFDGDGDRVMMVDHTGAVVDGDELLFLIARDLQESGRLQ GGVVGTLMSNLGLELALQELHIPFVRAKVGDRYVMAELLARNWMLGGENSGHIVCCQN TTTGDAIIAALQVLMALKHRGQTLAEARQGIRKCPQVLINVRFKGENDPLEHPSVKEA SVRVTEQMGGRGRVLLRKSGTEPLVRVMVEGDEEASVRAHAEQLAKIVSEVCA" misc_feature complement(5333573..5334898) /gene="glmM" /locus_tag="PA4749" /note="phosphoglucosamine mutase; Provisional; Region: glmM; PRK10887" /db_xref="CDD:236787" misc_feature complement(order(5333651..5333653,5333666..5333674, 5333678..5333680,5333921..5333923,5333927..5333929, 5333933..5333935,5333984..5333992,5334053..5334055, 5334170..5334175,5334179..5334181,5334185..5334187, 5334572..5334574,5334596..5334604,5334869..5334871, 5334878..5334880,5334884..5334886)) /gene="glmM" /locus_tag="PA4749" /note="active site" /db_xref="CDD:100095" misc_feature complement(order(5333651..5333653,5333666..5333674, 5333678..5333680,5333921..5333923,5333927..5333929, 5333933..5333935,5333984..5333986,5333990..5333992, 5334053..5334055,5334170..5334172,5334602..5334604, 5334878..5334880)) /gene="glmM" /locus_tag="PA4749" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100095" misc_feature complement(order(5334173..5334175,5334179..5334181, 5334185..5334187,5334602..5334604)) /gene="glmM" /locus_tag="PA4749" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:100095" protein_bind 5333850..5333862 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4748" /bound_moiety="AmrZ" gene complement(5334921..5335772) /gene="folP" /locus_tag="PA4750" /db_xref="GeneID:881715" CDS complement(5334921..5335772) /gene="folP" /locus_tag="PA4750" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="dihydropteroate synthase" /protein_id="NP_253438.1" /db_xref="GeneID:881715" /translation="MSNPQYPTRLPCGSRVLDLARPHVMGILNVTPDSFSDGGRYDRL DDALRHAERMVLEGATLIDVGGESTRPGARSVSPTEELERVAPVVERIARELDVVISV DTSTPAVMRETARLGAGLINDVRSLQRDGALDAAVDSGLAVCLMHMRGEPQTMQDAPA YQDVVAEVGAFLQERVDACVAAGIDRERLLLDPGFGFAKTLEHNLVLFRHLQALHGLG LPLLVGVSRKSMIGKVLGREVDERLYGSLALAALALAKGARIIRVHDVAATVDVMRMI SAVEMAD" misc_feature complement(5334924..5335730) /gene="folP" /locus_tag="PA4750" /note="Dihydropteroate synthase [Coenzyme transport and metabolism]; Region: FolP; COG0294" /db_xref="CDD:440063" gene complement(5335782..5337701) /gene="ftsH" /locus_tag="PA4751" /db_xref="GeneID:881716" CDS complement(5335782..5337701) /gene="ftsH" /locus_tag="PA4751" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cell division protein FtsH" /protein_id="NP_253439.1" /db_xref="GeneID:881716" /translation="MAKNLILWLIIAAVLVTVMNNFSSPSEPQTLNYSDFIQQVKDGK VERVTVDGYVITGKRSDGDTFKTIRPAIQDNGLIGDLVNNNVVVEGKQPEQQSIWTQL LVASFPILVIIAVFMFFMRQMQGGGGGRGGPMSFGKSKARLLSEDQVKTTFADVAGCD EAKEEVSELVEFLRDPGKFQRLGGRIPRGVLMVGPPGTGKTLLAKAIAGEAKVPFFTI SGSDFVEMFVGVGASRVRDMFDQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQT LNQLLVEMDGFEMNDGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDIRGREQILK VHMRKVPLGDHVDPAVIARGTPGFSGADLANLVNEASLFAARSNKRIVDMREFELAKD KIMMGAERKTMVMSEKEKRNTAYHEAGHAIVGRLVPEHDPVYKVSIIPRGRALGVTMF LPEEDRYSLSKRALESQICSLFGGRIAEEMTLGFEGVTTGASNDIMRATQLARNMVTK WGLSEKLGPLMYAEEEGEVFLGRSAGSQHANVSGETAKMIDQEVRRIIDDCYGTAKRL LDENRDKLEMMADALMKYETIDSDQIDDIMAGRVPREPRDWQGGSGTGTPPANLEESG RRENTPPIGGPAGEH" misc_feature complement(5335908..5337671) /gene="ftsH" /locus_tag="PA4751" /note="ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones]; Region: HflB; COG0465" /db_xref="CDD:440233" gene complement(5337900..5338523) /gene="ftsJ" /locus_tag="PA4752" /db_xref="GeneID:881725" CDS complement(5337900..5338523) /gene="ftsJ" /locus_tag="PA4752" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cell division protein FtsJ" /protein_id="NP_253440.1" /db_xref="GeneID:881725" /translation="MARSKTSQRWLKEHFDDPYVKMAQRDGYRSRASYKLLEIQEKDR ILRPGMTVVDLGAAPGGWSQVTSRVIGDRGRLIASDILEMDSIPDVTFIQGDFTEDAV FARILEAIGDHPVDLVISDMAPNMSGVRAADQPRAMYLCELALDLAGRVLRPGGDFLI KIFQGEGFDQYHKQAREMFDKVQMRKPLSSRDRSREQYLLARGFRGE" misc_feature complement(5337906..5338523) /gene="ftsJ" /locus_tag="PA4752" /note="23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ [Translation, ribosomal structure and biogenesis]; Region: RlmE; COG0293" /db_xref="CDD:440062" gene 5338618..5338932 /locus_tag="PA4753" /db_xref="GeneID:881726" CDS 5338618..5338932 /locus_tag="PA4753" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253441.1" /db_xref="GeneID:881726" /translation="MALTQEQKKQFKSIGHHLKPVLIVAENGLTEGVLAELERALNDH ELIKVKLALAERDDRRALLDELCAQSRSDLVQSIGKMALVYRKNPKPNKNLSNISRFA GI" misc_feature 5338624..5338896 /locus_tag="PA4753" /note="RNA-binding protein YhbY [Translation, ribosomal structure and biogenesis]; Region: YhbY; COG1534" /db_xref="CDD:441143" gene complement(5338973..5339380) /locus_tag="PA4754" /db_xref="GeneID:881735" CDS complement(5338973..5339380) /locus_tag="PA4754" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253442.1" /db_xref="GeneID:881735" /translation="MRAGAISWLLAQTFWVGGLWLLQFVVLPALAKTGLAPLLVETVA AALTPLLIGFAGFCAALQALVLVSSHGPRSLWRDLRGQLLLAVALLCLVYFLVRGLAP EAVRWLLFNYLAVAMCGLLLVLQPVPGRDEEGV" gene complement(5339391..5339867) /gene="greA" /locus_tag="PA4755" /db_xref="GeneID:881736" CDS complement(5339391..5339867) /gene="greA" /locus_tag="PA4755" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcription elongation factor GreA" /protein_id="NP_253443.1" /db_xref="GeneID:881736" /translation="MSKFPMTVQGARALEEEVKHLKGVLRPQISQAIAEARELGDLKE NAEYHAAREQQGMVEARIRDIEAKLSNAQVIDVTAIPHSGKVIFGTTVDIANVETDET VTYQIVGDDEADIKGGKISVNSPIARALIGKTEGDAVLVRTPGGDVEYEIVEVRHI" misc_feature complement(5339397..5339867) /gene="greA" /locus_tag="PA4755" /note="transcription elongation factor GreA; Reviewed; Region: greA; PRK00226" /db_xref="CDD:234693" gene complement(5339864..5343085) /gene="carB" /locus_tag="PA4756" /db_xref="GeneID:881743" CDS complement(5339864..5343085) /gene="carB" /locus_tag="PA4756" /EC_number="6.3.5.5" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="carbamoyl phosphate synthase large subunit" /protein_id="NP_253444.1" /db_xref="GeneID:881743" /translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV ILVNSNPATIMTDPAMADATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDL ERHGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKDIGLACPRSGIAHSMEEAYGVLE QVGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEM EVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG VETGGSNVQFGICPNTGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDE LQNDITGGRTPASFEPAIDYVVTKIPRFAFEKFPKADARLTTQMKSVGEVMAIGRTFQ ESVQKALRGLEVGATGFDPKLDLNDPEADSILKRELTVPSAERVWYVADAFRAGKSVE EVFELTRIDEWFLVQIEDLVKDEEKVKTLGLSSIDRELMYKLKRKGFSDARLAKLLGV TEKNLRSHRHKLKVLPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSSREKIMILGG GPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLED VLEIVRVEQPKGVIVQYGGQTPLKLCRALEEAGVPIIGTSPDAIDRAEDRERFQQMVQ RLNLRQPANATARSEDEALAASKAIGYPLVVRPSYVLGGRAMEIVYQEEELKRYMREA VQVSNDSPVLLDHFLNCAIEVDIDAVCDGEIVVIGAIMQHIEQAGVHSGDSACSLPPY SLPQHIQDEIREQVKKMALELGVVGLMNVQMAVQGEDIFVIEVNPRASRTVPFVSKCV GESLAKVAARVMAGKTLAEVGFTQEIIPPFFSVKEAVFPFAKFPGVDPILGPEMKSTG EVMGVGDSFAEAFAKAQLGASEILPTAGCAFISVREDDKPFAAQVAGDLVALGFEVVA TAGTARVIEAAGLPVRRVNKVTEGRPHVVDMIKNDEVTLIINTTEGRQSIADSYSIRR NALQHKICCTTTIAGGQAICEALKFGPEKTVRRLQDLHAGIKA" misc_feature complement(5339882..5343085) /gene="carB" /locus_tag="PA4756" /note="carbamoyl-phosphate synthase large subunit; Region: carB; PRK05294" /db_xref="CDD:235393" gene complement(5343105..5343755) /locus_tag="PA4757" /db_xref="GeneID:881750" CDS complement(5343105..5343755) /locus_tag="PA4757" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="leucine export protein LeuE" /protein_id="NP_253445.1" /db_xref="GeneID:881750" /translation="MPTLGITDFWTYVLGVVFVILLPGPNSLFVLATSAQRGVATGYR AACGVFLGDAVLMLLSALGVASLLKAEPMLFIGLKYLGAAYLFYLGVGMLRGAWRKLR NPEATAAQAEQVDVHQPFRKALLLSLSNPKAILFFISFFIQFVDPGYAYPGLSFLVLA VILELVSALYLSFLIFTGVRLAAWFRRRQRLAAGATSGVGALFVGFGVKLATATLS" misc_feature complement(5343111..5343755) /locus_tag="PA4757" /note="leucine export protein LeuE; Provisional; Region: PRK10958" /db_xref="CDD:236807" gene complement(5343767..5344903) /gene="carA" /locus_tag="PA4758" /db_xref="GeneID:881751" CDS complement(5343767..5344903) /gene="carA" /locus_tag="PA4758" /EC_number="6.3.5.5" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="carbamoyl phosphate synthase small subunit" /protein_id="NP_253446.1" /db_xref="GeneID:881751" /translation="MTKPAILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILT DPSYAQQIVTLTYPHIGNTGTTPEDAEANRVWAAGLIIRDLPLIASNWRSKQSLPDYL KANGTVAIAGIDTRRLTRILREKGSQNGCILAGADATEERALELARAFPGLKGMDLAK EVTTAERYEWRSSVWNLESDSHPEIPAGELPYHVVAYDYGVKLNILRMLVARGCRLTV VPAQTPASEVLALNPDGIFLSNGPGDPEPCDYAIQAIREFLDTEIPVFGICLGHQLLA LASGAKTLKMGHGHHGANHPVQDLDSGVVMITSQNHGFAVDESTLPDNLRATHKSLFD GTLQGIERTDKVAFSFQGHPEASPGPHDVAPLFDRFISAMAERR" misc_feature complement(5343779..5344903) /gene="carA" /locus_tag="PA4758" /note="Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism, Nucleotide transport and metabolism]; Region: CarA; COG0505" /db_xref="CDD:440271" gene complement(5344950..5345060) /locus_tag="PA4758.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965632" ncRNA complement(5344950..5345060) /ncRNA_class="other" /locus_tag="PA4758.1" /product="P32" /db_xref="GeneID:6965632" gene complement(5345086..5345892) /gene="dapB" /locus_tag="PA4759" /db_xref="GeneID:881759" CDS complement(5345086..5345892) /gene="dapB" /locus_tag="PA4759" /EC_number="1.17.1.8" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="4-hydroxy-tetrahydrodipicolinate reductase" /protein_id="NP_253447.1" /db_xref="GeneID:881759" /translation="MRRIAVVGAAGRMGKNLIEAVQQTGGAAGLTAAVDRPDSTLVGA DAGELAGLGRIGVPLSGDLGKVCEEFDVLIDFTHPSVTLKNIEQCRKARRAMVIGTTG FSADEKLLLAEAAKDIPIVFAANFSVGVNLCLKLLDTAARVLGDEVDIEIIEAHHRHK VDAPSGTALRMGEVVAQALGRDLQEVAVYGREGQTGARARETIGFATVRAGDVVGDHT VLFAAEGERVEITHKASSRMTFARGAVRAALWLEGKENGLYDMQDVLGLR" misc_feature complement(5345098..5345886) /gene="dapB" /locus_tag="PA4759" /note="4-hydroxy-tetrahydrodipicolinate reductase [Amino acid transport and metabolism]; Region: DapB; COG0289" /db_xref="CDD:440058" gene complement(5345949..5347082) /gene="dnaJ" /locus_tag="PA4760" /db_xref="GeneID:881760" CDS complement(5345949..5347082) /gene="dnaJ" /locus_tag="PA4760" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="molecular chaperone DnaJ" /protein_id="NP_253448.1" /db_xref="GeneID:881760" /translation="MAKRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAE DKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFSDF FGGGGARGGSRGGAQRGADLRYTLDLDLEEAVRGTTVTIRVPTLVGCKTCNGSGAKPG TTPVTCTTCGGIGQVRMQQGFFSVQQTCPRCHGTGKMISDPCGSCHGQGRVEEQKTLS VKVPAGVDTGDRIRLTGEGEAGSMGGPAGDLYVVVNVREHPIFQRDGKHLYCEVPISF ADAALGGELEVPTLDGRVKLKIPESTQTGKLFRLRGKGVAPVRGGGAGDLMCKVVVET PVNLDKRQRELLEEFRKSLQSDTSHSPKASGWFEGMKRFFDDL" misc_feature complement(5345958..5347082) /gene="dnaJ" /locus_tag="PA4760" /note="chaperone protein DnaJ; Provisional; Region: PRK10767" /db_xref="CDD:236757" gene complement(5347198..5349111) /gene="dnaK" /locus_tag="PA4761" /db_xref="GeneID:881765" CDS complement(5347198..5349111) /gene="dnaK" /locus_tag="PA4761" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="molecular chaperone DnaK" /protein_id="NP_253449.1" /db_xref="GeneID:881765" /translation="MGKIIGIDLGTTNSCVAILENGNVKVIENAEGARTTPSIIAYTN DGETLVGQPAKRQAVTNPQNTLYAVKRLIGRRFEENVVQKDIQMVPYSIVKADNGDAW VEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRI AGLDVKRIINEPTAAALAYGLDKAKGDHTVIVYDLGGGTFDVSVIEIAEVDGEHQFEV LATNGDTFLGGEDFDIRLIDYLVDEFKKESGINLKGDPLAMQRLKEAAEKAKIELSST QQTDVNLPYVTADASGPKHLNVKVSRAKLESLVEDLVQRTIEPCRTALKDAGLDVSDI HEVILVGGQTRMPLVQKTVAEFFGKEARKDVNPDEAVAVGAAIQGAVLAGDVKDVLLL DVTPLTLGIETLGGVMTGLIEKNTTIPTKKSQVFSTADDNQGAVTIHVLQGERKQAAQ NKSLGKFDLADIPPAPRGVPQIEVTFDIDANGILHVSAKDKATGKQQSIVIKASSGLS EDEIQQMVRDAEANAEEDRKFEELAAARNQGDALVHATRKMITEAGDKATAEDKATIE KALGELEAAVKGDDKAEIEAKMNALSQASTPLAQKMYAEQAQQGEDAPQGEQAKAADD VVDAEFEEVKDNK" misc_feature complement(5347201..5349111) /gene="dnaK" /locus_tag="PA4761" /note="molecular chaperone DnaK; Provisional; Region: dnaK; PRK00290" /db_xref="CDD:234715" gene complement(5349201..5349761) /gene="grpE" /locus_tag="PA4762" /db_xref="GeneID:881766" CDS complement(5349201..5349761) /gene="grpE" /locus_tag="PA4762" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="heat shock protein GrpE" /protein_id="NP_253450.1" /db_xref="GeneID:881766" /translation="MADEQQTLDQQTPEQPTGAAEDLTARVQELEEQLAAAQDQALRM VADLQNVRRRAEQDVEKAHKFALEKFAGDLLAVVDTLERGLEMSDPNDEAIKPMREGM ELTLKMFDDTLRRYQVEALNPEGEPFNPEQHQAMAMQESASAEPGSVLKVFQKGYLLN GRLLRPAMVVVSKAPAETPPSIDEQA" misc_feature complement(5349240..5349761) /gene="grpE" /locus_tag="PA4762" /note="heat shock protein GrpE; Provisional; Region: PRK14151" /db_xref="CDD:172640" misc_feature complement(5349507..5349659) /gene="grpE" /locus_tag="PA4762" /note="2-helical coiled coil [structural motif]; Region: 2-helical coiled coil" /db_xref="CDD:271355" misc_feature complement(order(5349414..5349419,5349435..5349437, 5349444..5349452,5349456..5349461,5349510..5349515, 5349519..5349533,5349537..5349545,5349552..5349557, 5349561..5349566,5349573..5349578,5349585..5349590, 5349597..5349599,5349603..5349611,5349618..5349623, 5349627..5349632,5349639..5349644,5349651..5349653)) /gene="grpE" /locus_tag="PA4762" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:271355" misc_feature complement(order(5349249..5349251,5349258..5349260, 5349264..5349266,5349276..5349278,5349303..5349305, 5349351..5349365,5349369..5349374,5349378..5349380, 5349504..5349506,5349513..5349515,5349579..5349581, 5349603..5349605)) /gene="grpE" /locus_tag="PA4762" /note="Hsp70 (ATPase domain) interactions [polypeptide binding]; other site" /db_xref="CDD:271355" misc_feature complement(5349414..5349461) /gene="grpE" /locus_tag="PA4762" /note="2-helical coiled coil [structural motif]; Region: 2-helical coiled coil" /db_xref="CDD:271355" gene 5349929..5351605 /gene="recN" /locus_tag="PA4763" /db_xref="GeneID:881773" CDS 5349929..5351605 /gene="recN" /locus_tag="PA4763" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA repair protein RecN" /protein_id="NP_253451.1" /db_xref="GeneID:881773" /translation="MLVHLSVHNYAIVEHLDLELATGMSVITGETGAGKSIMLDALGL TLGDRADSGAVRPGADKADILASFDVSAIAEARDWLAERDLEQDGPCILRRVITAEGR SRAYINGTPCPLGDLKSLGELLIDIHSQHEHQSLLKSETHRRLLDEYAGCQELARQVQ LAAQRWKQTSQELERLSRSGDEQRARHQLLSYQLEELENLSLGENELESLEQEQKTLS NAESLLAACRQVVEMCSESDAGNVLSALNASLNRLTSFSGQPAALGEAVNLLSSAQIQ VEEAIGELNRFVDHFDADPNRQQQVEERLDVIYSLARKHRVQPAELADLQQRLFDELE ALNADDEAVGRLGDELAAYARHYQEEAEELSRLRQAAAAPLAASVEQEMQRLGMPGGR FAIVLHPGDSAEPQANGLESVEFLVSANPGQPLKGLAKVASGGELSRISLAIQVITAQ TSRIPTLVFDEVDVGIGGPTAEVVGQLLRRLGERGQVLTVTHLPQVAAQGHQHLFVHK ERGSSETRTAVATLNKAQRIEEIARMLGGVDLTKESLAHAKKLVNLAAQN" misc_feature 5349929..5351599 /gene="recN" /locus_tag="PA4763" /note="DNA repair ATPase RecN [Replication, recombination and repair]; Region: RecN; COG0497" /db_xref="CDD:440263" gene complement(5351675..5352079) /gene="fur" /locus_tag="PA4764" /db_xref="GeneID:881780" CDS complement(5351675..5352079) /gene="fur" /locus_tag="PA4764" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="ferric uptake regulation protein" /protein_id="NP_253452.1" /db_xref="GeneID:881780" /translation="MVENSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALME AGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFM DAEIEKRQKEIVRERGFELVDHNLVLYVRKKK" misc_feature complement(5351693..5352070) /gene="fur" /locus_tag="PA4764" /note="helix_turn_helix, cAMP Regulatory protein C-terminus; DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family; Region: HTH_CRP; cl46859" /db_xref="CDD:481199" gene 5352177..5352707 /gene="omlA" /locus_tag="PA4765" /db_xref="GeneID:881781" CDS 5352177..5352707 /gene="omlA" /locus_tag="PA4765" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein OmlA" /protein_id="NP_253453.1" /db_xref="GeneID:881781" /translation="MQNAKLMLTCLAFAGLAALAGCSFPGVYKIDIQQGNVVTQDMID QLRPGMTRRQVRFIMGNPLIVDTFHANRWDYLYSIQPGGGRRQQERVSLFFNDSDQLA GLNGDFMPGVSRDEAILGKEGSTTVTQPADQQKPEAQKEEPPKPGSTLEQLQREVDEA QPVPVPTPEPLDPSPQ" misc_feature 5352240..5352575 /gene="omlA" /locus_tag="PA4765" /note="Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complex [Cell wall/membrane/envelope biogenesis]; Region: BamE; COG2913" /db_xref="CDD:442157" gene complement(5352775..5353080) /locus_tag="PA4766" /db_xref="GeneID:881790" CDS complement(5352775..5353080) /locus_tag="PA4766" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253454.1" /db_xref="GeneID:881790" /translation="MAEIAVEVVYALPERQALLRLSVPAGTSAREAVLLSGIAEAFPG LDVQGCPLGIFGKLLARPEERVLEAGERVEIYRPLIADPKEVRKQRAARARSEREGG" misc_feature complement(5352802..5353080) /locus_tag="PA4766" /note="Putative antitoxin component PasI (RatB) of the RatAB toxin-antitoxin module, ubiquitin-RnfH superfamily [Defense mechanisms]; Region: PasI; COG2914" /db_xref="CDD:442158" gene complement(5353073..5353507) /locus_tag="PA4767" /db_xref="GeneID:881791" CDS complement(5353073..5353507) /locus_tag="PA4767" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253455.1" /db_xref="GeneID:881791" /translation="MSTHIQRSALLPYPARALFDLVNDVKRYPEFLPWCSASQVLEES ESLMRAELTVAKGSLSQRFTTRNVLVPGASIEMNLENGPFTELHGVWQFKALGEKACK ITLDLTFDYAGPLVKATLGPLFTQAANTMVDAFCQRAKQLYG" misc_feature complement(5353082..5353495) /locus_tag="PA4767" /note="Coenzyme Q-binding protein COQ10p and similar proteins; Region: COQ10p_like; cd07813" /db_xref="CDD:176855" misc_feature complement(order(5353103..5353105,5353112..5353120, 5353124..5353132,5353136..5353150,5353181..5353183, 5353187..5353189,5353193..5353195,5353199..5353201, 5353229..5353231,5353235..5353237,5353241..5353246, 5353277..5353279,5353283..5353285,5353301..5353303, 5353307..5353309,5353313..5353315,5353346..5353348, 5353352..5353354,5353358..5353360,5353364..5353366, 5353394..5353396,5353439..5353444,5353448..5353456, 5353481..5353483,5353487..5353489,5353493..5353495)) /locus_tag="PA4767" /note="putative coenzyme Q binding site [chemical binding]; other site" /db_xref="CDD:176855" gene 5353783..5354262 /gene="smpB" /locus_tag="PA4768" /db_xref="GeneID:881797" CDS 5353783..5354262 /gene="smpB" /locus_tag="PA4768" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="SsrA-binding protein" /protein_id="NP_253456.1" /db_xref="GeneID:881797" /translation="MAKQKKHPSGTIAQNKKALHDYFIEQRFEAGVALAGWEVKSLRA GKAQLVDSYVLLKDGEAWLLGSHITPLTTASTHVIADPVRTRKLLLHKRELGKLFGAV QQKGYACVALSMYWKKHLVKCEIALAKGKKDFDKRHTEKERDSDREIQRAMRHGKDD" misc_feature 5353783..5354247 /gene="smpB" /locus_tag="PA4768" /note="tmRNA-binding protein [Posttranslational modification, protein turnover, chaperones]; Region: SmpB; COG0691" /db_xref="CDD:440455" gene complement(5354285..5355058) /locus_tag="PA4769" /db_xref="GeneID:881798" CDS complement(5354285..5355058) /locus_tag="PA4769" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253457.1" /db_xref="GeneID:881798" /translation="MEFGQVRQRRLSDDIVAQLEAMILEGTLKSGERLPAERVLAEQF GVSRPSLREAIQKLVAKGLLVSRQGGGNYVTESLGATFSDPLLHLLEGNPEAQRDLLE FRHTLEGSCAYYAALRATSLDHQRLTEAFEALQACYARNDQVSAEEGAADARFHLAIA EASHNTVLLHTIKGLFDLLRRNVVTNIGGMYAQRTETRAQLMEQHQRLYDAIISGQAE LAREVSNQHIHYVQEVLAEVQEEARRMKRSQRRRSVQED" misc_feature complement(5354336..5355058) /locus_tag="PA4769" /note="pyruvate dehydrogenase complex transcriptional repressor PdhR; Region: pdhR; PRK09464" /db_xref="CDD:181879" gene 5355387..5357075 /gene="lldP" /locus_tag="PA4770" /db_xref="GeneID:881808" CDS 5355387..5357075 /gene="lldP" /locus_tag="PA4770" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="L-lactate permease" /protein_id="NP_253458.1" /db_xref="GeneID:881808" /translation="MQAWQQLYTPLGSLGLSAAAAVIPIVFFFLALAVFRLKGHIAGS ITLALAIAVAIFAFHMPADMAFAAAGYGFLYGLWPIAWIIVAAVFLYKLTVKSGQFEV IRSSVLSITGDQRLQVLLIGFSFGAFLEGAAGFGAPVAITAALLVGLGFNPLYAAGLC LIANTAPVAFGALGIPIIVAGQVTGIDAFKIGAMTGRQLPFLSILVPFWLVFMMDGWR GIRETWPAAIVAGGSFAITQYLTSNFIGPELPDITSALVSLVSLTLFLKVWQPQGASE ALAAGGGAAVAVAGGGFGGQRSVEPSAYSFGEILKAWSPFLVLTVLVTIWTLKPFKAL FAPGGELYWLVFNFAIPHLDQLVVKGAPIATSATPIAAVFKFDPISATGTAIFLSALV SMFILRIGAKIGITTFKEVLVELKWPILSIGMVLAFAFVTNYSGMSTTLALVLAGTGA AFPFFSPFLGWLGVFLTGSDTSSNALFSSLQSTTAHQIGVSDTLLVAANTSGGVTGKM ISPQSIAVACAATGMVGKESDLFRFTLKHSLIFAALVGLITLAQAYLFTGMLVH" misc_feature 5355387..5357066 /gene="lldP" /locus_tag="PA4770" /note="L-lactate permease; Region: Lactate_perm; cl00701" /db_xref="CDD:445056" gene 5357230..5358375 /gene="lldD" /locus_tag="PA4771" /db_xref="GeneID:881809" CDS 5357230..5358375 /gene="lldD" /locus_tag="PA4771" /EC_number="1.1.2.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="L-lactate dehydrogenase" /protein_id="NP_253459.1" /db_xref="GeneID:881809" /translation="MIISASTDYRAAAQRKLPPFLFHYIDGGAYAEYTLRRNVEDLSA IALRQRVLKNMSELSLETRLFDETLAMPVALAPVGLTGMYARRGEVQAARAAAAKGVP FTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPV PGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLGNISAYRGNPTGLE DYIGWLGANFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHG GRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVY ALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEISADSLVRELGA" misc_feature 5357230..5358372 /gene="lldD" /locus_tag="PA4771" /note="L-lactate dehydrogenase; Provisional; Region: lldD; PRK11197" /db_xref="CDD:183033" gene 5358442..5361258 /locus_tag="PA4772" /db_xref="GeneID:881816" CDS 5358442..5361258 /locus_tag="PA4772" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ferredoxin" /protein_id="NP_253460.1" /db_xref="GeneID:881816" /translation="MSLPIPFLETVERLIPRERRFDDPLSTLAFGTDASFYRLIPKLV LRVESEDEVAAILSAAYREQVPVTFRAAGTSLSGQAISDSVLLVLGDNWNGREIRADG AQIRLQPGVIGAQANAWLAPFGRKIGPDPASINACKIGGIVANNASGMCCGTAQNSYH TLAGLRLLLADGTRLDSEDPASVAAFRASHGELLERLAELGRETRANAELAAKIRHKY RLKNTTGLSLNALVDYDEPLDILTHLMVGSEGTLGFISAVTYDTVPEHPHKASALLVF PTVETCCTAVAVLKRQPVSAVELLDRRSLRSVENMQGMPEWVKSLSAGACALLIESRA ASRTLLHEQLGRIMASIAEYPLEKQVDFSEDPAVYNQLWRIRKDTFPAVGAVRETGTT VIIEDVTFPVERLAEGVNRLIELFDKHRYDEAILFGHALEGNLHFVFTQGFDSPEQIA RYSAFMDDVAHLVAVEYGGSLKAEHGTGRNMAPFVELEWGEDAYRLMWQLKRLLDPRG ILNPGVVLSDDPQSHLKNLKPLPAADEIVDKCIECGFCEPVCPSRGLTLTPRQRIVLW RDIQAKKRAGVDTTALERDYRYQGIDTCAATGLCAQRCPVNINTGELIRKLRGADARH AEGATWLARNFAGAMRAARFALLAADGARRLLGAPLLARASRGLSQASGGRVPQWTPA LPQPVRLAPPTAPLDDERPRVVYLAACVSRAMGPAFGDEEREPLLDKTRRLLEKAGYQ VVFPDNLDNLCCGQPFASKGYAKQADDKRDELLAALLQASRGGLDPIYCDTSPCTLRL VQGLDDPRLQIHDPVKFIRSHLLDRLEFIPQDKPVAVHVTCSTQHLGESQALIDLVGR CTRKVVIPEGIHCCGFAGDKGFTTPELNAHSLRSLKDAVQFCEEGVSTSRTCEIGLSE HGGIDYRGVVYLVDRVTQAKGAPR" misc_feature 5358478..5359998 /locus_tag="PA4772" /note="FAD/FMN-containing lactate dehydrogenase/glycolate oxidase [Energy production and conversion]; Region: GlcD; COG0277" /db_xref="CDD:440046" misc_feature 5359828..5361228 /locus_tag="PA4772" /note="Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF [Energy production and conversion]; Region: GlpC; COG0247" /db_xref="CDD:440017" gene 5361586..5362068 /locus_tag="PA4773" /db_xref="GeneID:881823" CDS 5361586..5362068 /locus_tag="PA4773" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253461.1" /db_xref="GeneID:881823" /translation="MAIQPLRLDPITVLGKQLVIELFDCVDQRFDDIQWIEESMLEAA RQANATIITSAFHKFSPIGISGVVVIAESHLAIHTWPEYGYAAVDVFTCGDVLDGAQA VRVLSERLGSRRHLISSMDRGLGGHRLGLLSRSLAGNGPVDEDSPTLRWALGQGTGVA " misc_feature 5361622..5361948 /locus_tag="PA4773" /note="S-adenosylmethionine decarboxylase proenzyme, Bacillus form; Region: SAM_DCase_Bsu; TIGR03330" /db_xref="CDD:274523" gene 5362146..5363195 /locus_tag="PA4774" /db_xref="GeneID:881824" CDS 5362146..5363195 /locus_tag="PA4774" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253462.1" /db_xref="GeneID:881824" /translation="MPAEVAAGLPPLPPNHFYFYPPDPLLEGDGAITAIEDSDPFDQY VYRLRRVLYQGRTRWQNVLIADTYNYDRVLMLDGAIQSAESDESLYHELLVQPAMLAH DEPRDVLIIGGGEGATLREVLSHASVRRAVMVDLDRELVELCREHLFQWHQGAFDDPR CELLAEDGRAYLERDPSLYDVVIIDVVDMLDNGPAQALYTRQFYELLHSRLRPGGVVA VQGLEFSHSDDKPHAALARTLRSVFSQVHSYRATVPSFLSSWGFLLASDWLDTNHWQA EDIDRRIERKLGPLWLDHLDGDYLKACFVMDRETRFLLAQPGPVLEDGVPFVAPPDIE EIEFGPAQLPALART" misc_feature 5362275..5363093 /locus_tag="PA4774" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases; cl17173" /db_xref="CDD:473071" misc_feature order(5362476..5362496,5362548..5362553,5362641..5362649, 5362698..5362700) /locus_tag="PA4774" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 5363198..5364058 /locus_tag="PA4775" /db_xref="GeneID:881833" CDS 5363198..5364058 /locus_tag="PA4775" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253463.1" /db_xref="GeneID:881833" /translation="MSAAPLASVPLAVNGAPCLLHRVRFRSAADGGGLPLLATLRDPQ PALAVLAQRIELSEDAELPETAVDDELLVIFANAGLQTGHAWRQRLEAWMAAGEDERQ PTLEAPSFGERVLWRPGRALVIGNPERCRELLEGLAVFAWHEGHLRRLEGETAAAWEP AQADVELTQLPRRAALRRQEHVNRQVRRTTLWRMAYARLESHLEKPPLQLNGAVRRLY NELAMQAEVHDRLATLDDRIEVLQDLYELAADRLGEYRYFRGELRVEWLIVAILLLEA GLSLWELWNH" misc_feature <5363843..5364046 /locus_tag="PA4775" /note="RMND1/Sif2-Sif3/Mrx10, DUF155; Region: DUF155; cl00751" /db_xref="CDD:469904" gene 5364071..5364736 /gene="pmrA" /locus_tag="PA4776" /db_xref="GeneID:881834" CDS 5364071..5364736 /gene="pmrA" /locus_tag="PA4776" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component regulator system response regulator PmrA" /protein_id="NP_253464.1" /db_xref="GeneID:881834" /translation="MRILLAEDDLLLGDGIRAGLRLEGDTVEWVTDGVAAENALVTDE FDLLVLDIGLPRRSGLDILRNLRHQGLLTPVLLLTARDKVADRVAGLDSGADDYLTKP FDLDELQARVRALTRRTTGRALPQLVHGELRLDPATHQVTLSGQAVELAPREYALLRL LLENSGKVLSRNQLEQSLYGWSGDVESNAIEVHVHHLRRKLGNQLIRTVRGIGYGIDQ PAP" misc_feature 5364071..5364727 /gene="pmrA" /locus_tag="PA4776" /note="two-component system response regulator QseB; Region: PRK10336" /db_xref="CDD:182387" gene 5364760..5366193 /gene="pmrB" /locus_tag="PA4777" /db_xref="GeneID:881841" CDS 5364760..5366193 /gene="pmrB" /locus_tag="PA4777" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component regulator system signal sensor kinase PmrB" /protein_id="NP_253465.1" /db_xref="GeneID:881841" /translation="MSRAAVPSVRRRLLVNLLVGFVLCWLSVAALTYHLSLKQVNRLF DDDMVDFGEAALRLLDLATEDQAGEDGSITEIIERSREAIQGLPLLRRESALGYALWR DGQPLLSSLNLPPEITAQGPGFSTVEAQGTHWRVLQLNIDGFQIWISENLIYRQHTMN LLLFYSLFPLLLALPLLGGLVWFGVARGLAPLREVQAEVQQRSARHLQPIAVEAVPLE IRGLIDELNLLLERLRTALEAERRLTSDAAHEIRTPLASLRTHAQVALRSEDPKAHAR GLLQVSRSVERISTLMEQILLLARLDGDALLEQFHPVNLATLAEDVLSELARQAIDKD IELSLHQETVYVMGIDLWLKAMVGNLVGNALRYTPAGGQVEIRVENRAQHAVLRVRDN GPGVALEEQQAIFTRFYRSPATSSGEGSGLGLPIVKRIVELHFGSIGLGKGLEGKGLE VQVFLPKTQPDATRPPARGPDSGRSHI" misc_feature 5364760..5366061 /gene="pmrB" /locus_tag="PA4777" /note="sensor protein QseC; Provisional; Region: PRK10337" /db_xref="CDD:182388" protein_bind 5366182..5366200 /experiment="Beta-gal reporter assay [PMID: 20233934]" /experiment="DNA-array expression analysis [PMID: 20233934]" /experiment="EMSA [PMID: 20233934]" /experiment="Site directed mutagenesis [PMID: 20233934]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA4778" /bound_moiety="LasR" protein_bind 5366213..5366228 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA4778" /bound_moiety="LasR" protein_bind 5366232..5366247 /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /experiment="EMSA [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA4778" /bound_moiety="LasR" gene 5366257..5366655 /gene="cueR" /locus_tag="PA4778" /db_xref="GeneID:881842" CDS 5366257..5366655 /gene="cueR" /locus_tag="PA4778" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein CueR" /protein_id="NP_253466.1" /db_xref="GeneID:881842" /translation="MNIGEAAKKSGLTPKMIRYYESIELLRPAGRSASGYRHYNENDL HTLAFIRRSRDLGFSLDEVGKLLTLWQDRQRASADVKALAAQHVRELNRKIEELSTLR DTLQDLVEHCQGDHRPDCPILKDLASGCCH" misc_feature 5366257..5366637 /gene="cueR" /locus_tag="PA4778" /note="Helix-Turn-Helix DNA binding domain of CueR-like transcription regulators; Region: HTH_CueR; cd01108" /db_xref="CDD:133383" misc_feature order(5366260..5366268,5366308..5366310,5366359..5366367) /gene="cueR" /locus_tag="PA4778" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133383" misc_feature order(5366401..5366403,5366410..5366412,5366422..5366427, 5366452..5366454,5366464..5366466,5366485..5366490, 5366497..5366499,5366506..5366508,5366518..5366520, 5366536..5366538,5366548..5366550,5366557..5366562, 5366581..5366583,5366596..5366610,5366614..5366616, 5366620..5366622,5366629..5366634) /gene="cueR" /locus_tag="PA4778" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133383" misc_feature order(5366485..5366487,5366590..5366592,5366614..5366616) /gene="cueR" /locus_tag="PA4778" /note="copper binding site [ion binding]; other site" /db_xref="CDD:133383" gene complement(5367187..5368080) /locus_tag="PA4779" /db_xref="GeneID:880056" CDS complement(5367187..5368080) /locus_tag="PA4779" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253467.1" /db_xref="GeneID:880056" /translation="MPVAHILLALLVTLIWGLNFVVIKVGLGDFPPLLFCALRFALAA LPLLVLRGPMPAPFGRILLIGVLLGVVKFGLLFVGMAQGMPAGLSSLVLQSQVFFTIL IAALWLGERPTPRGLFGLLLAAAGLVLIGLERPLGDSLLAFLLVVAAALAWSFANIAT KRSGATDMLRLICWVSLVPPLPLLALSYLFEGPQAIERAVLNMSWGGFGALLYIAFGA TTVGFAIWSFLLRHYPASLVTPFALAVPVSGMLAGWLLLGERLDLDSLLACALVFVGL AITLLPASLLRRFAWPVRRLG" misc_feature complement(5367247..5368062) /locus_tag="PA4779" /note="O-acetylserine/cysteine exporter; Region: PRK11453" /db_xref="CDD:183142" gene complement(5368170..5369063) /locus_tag="PA4780" /db_xref="GeneID:880057" CDS complement(5368170..5369063) /locus_tag="PA4780" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253468.1" /db_xref="GeneID:880057" /translation="MKTPRRLEPLIEDGLIDEVVRPLMSGKEASVYVVRCGDSLRCAK VYKEANKRSFRQAAEYQEGRKVRNSRQARAMAKGSKYGRREQEEAWQNAEVAALFRLA GAGVRVPKPYDFLDGVLLMELVADADGDAAPRLNDVTLEPDEARRHHAFLIRQIVAML CAGLVHGDLSEFNVLLGPDGPVIIDLPQAVDAAGNNHAFSMLERDVGNMAAYFGRFAP ELRQTRYAKEMWALYEAGELTAETPLSGTFVEAEEAADVRAVLREIEAAQREEARRQA LRQADDAPRGEREEPPPPWLQ" misc_feature complement(5368242..5369063) /locus_tag="PA4780" /note="PA4780 family RIO1-like protein kinase; Region: prot_kin_PA4780; NF041645" /db_xref="CDD:469527" gene complement(5369187..5370368) /locus_tag="PA4781" /db_xref="GeneID:880075" CDS complement(5369187..5370368) /locus_tag="PA4781" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="cyclic di-GMP phosphodiesterase" /protein_id="NP_253469.1" /db_xref="GeneID:880075" /translation="MESMLDRPEQELVLVVDDTPDNLLLMRELLEEQYRVRTAGSGPA GLRAAVEEPRPDLILLDVNMPGMDGYEVCRRLKADPLTRDIPLMFLTARADRDDEQQG LALGAVDYLGKPVSPPIVLARVRTHLQLKANADFLRDKSEYLELEVRRRTRQLQQLQD AVIEALATLGDLRDNPRSRHLPRIERYVRLLAEHLAAQRAFADELTPEAVDLLSKSAL LHDIGKVAVPDRVLLNPGQLDAADTALLQGHTRAGRDALASAERRLGQPSGFLRFARQ IAYSHHERWDGRGFPEGLAGERIPLAARIVALADRYDELTSRHAYRPPLAHAEAVLLI QAGAGSEFDPRLVEAFVAVADAFAEVARRYADSAEALDVEMQRLEQAVAESIELTAPP A" misc_feature complement(5369364..5370356) /locus_tag="PA4781" /note="Response regulator c-di-GMP phosphodiesterase, RpfG family, contains REC and HD-GYP domains [Signal transduction mechanisms]; Region: RpfG; COG3437" /db_xref="CDD:442663" gene complement(5370476..5370721) /locus_tag="PA4782" /db_xref="GeneID:880076" CDS complement(5370476..5370721) /locus_tag="PA4782" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253470.1" /db_xref="GeneID:880076" /translation="MLRRSARMGRADGGTKMKALVIGVVLVFLGGCASHVSPGGKAIE SPIKEYFGQDPIERRAFGESENGAEAEDSPLRFRLTP" gene complement(5370755..5371645) /locus_tag="PA4783" /db_xref="GeneID:880391" CDS complement(5370755..5371645) /locus_tag="PA4783" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253471.1" /db_xref="GeneID:880391" /translation="MPARRLPLLLFGAFFALYFIWGSTYLAIRFGVESWPPMLMAGVR FVIAGGLMFAWLRWRGAPLPTWREWRGAGVVGILLLSCGNGGVTVAEHWGVSSGVAAL AVATVPLFTLLFSQLFGQRNTTLEWGGIVLGLFGIVLLNLGSNLQASPAGAGLILFAA ASWAFGSVWSRRLSLPAGPMASAAEMLVGGAVLLVGSLASGERLEHWPSTSGWLALVY LILFGSIIAFSAYQYLLRNVRPAAATSYAYVNPAVAVLLGTLFAGERIGGIEGLAMLV IISAVVLIGLPQWRASRAAA" misc_feature complement(5370767..5371639) /locus_tag="PA4783" /note="putative DMT superfamily transporter inner membrane protein; Provisional; Region: PRK11272" /db_xref="CDD:183067" gene 5371800..5372267 /locus_tag="PA4784" /db_xref="GeneID:880392" CDS 5371800..5372267 /locus_tag="PA4784" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253472.1" /db_xref="GeneID:880392" /translation="MDKYDRALLAALIDNGRLTFAELARRINLSPPAVADRVAKLEAE GVITGYHASVNLAKLGLPIECVIELRITEKDCQSVLDELARIPQLTLCHRITGDACVL MKAAVASMPELQDLIDRLMKFGISKTSMILSTPFADRQPASLRGQDGNGGCAA" misc_feature 5371800..5372198 /locus_tag="PA4784" /note="DNA-binding transcriptional regulator, Lrp family [Transcription]; Region: Lrp; COG1522" /db_xref="CDD:441131" gene complement(5372591..5373868) /locus_tag="PA4785" /db_xref="GeneID:880568" CDS complement(5372591..5373868) /locus_tag="PA4785" /EC_number="2.3.1.9" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyl-CoA acetyltransferase" /protein_id="NP_253473.1" /db_xref="GeneID:880568" /translation="MTQLRRVAIVGGNRIPFARSNTVYATASNQEMLTSALEGLVERY NLHGERLGEVVAGAVLKHSRDFNLTRECVLGSRLAPETPAYDIQQACGTGLEAAILVA NKIALGQIDSGIAGGVDTTSDAPIGVNEGLRKILLEANRGKSNLDKLKSLLKIRPRHV VPAIPRNGEPRTGLSMGESCELMAQTWQIPRDEQDRLAFESHHKLAAAYEEGWQNDLM TPFRGLTRDQNLRPDIDLEKIGTLKPVFERGSRGTLTAANSTPLTDGASVVLLASEEW AKARGLPILAYFKDGEAAAVNFVDRQEGLLMAPVYAVPRLLARNGLSLQDFDYYEIHE AFAAQVLCTLKAWEDPEYCKTRLGLDQPLGSIDRSKLNVKGSSLAAGHPFAATGGRIV ANLAKLLSLAEQGRGLISICAAGGQGVTAIIER" misc_feature complement(5372594..5373868) /locus_tag="PA4785" /note="acetyl-CoA C-acetyltransferase; Region: PRK09268" /db_xref="CDD:236440" protein_bind complement(5372710..5372722) /locus_tag="PA4785" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 5374123..5375478 /locus_tag="PA4786" /db_xref="GeneID:880569" CDS 5374123..5375478 /locus_tag="PA4786" /EC_number="1.1.1.100" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="3-ketoacyl-ACP reductase" /protein_id="NP_253474.1" /db_xref="GeneID:880569" /translation="MTDRYIAFANSPVGRRLVGAVGLPSPLRLERWQAGRVRPVDGPL VIGGSGALAEAVLPFAGKLTDAVFAAVDGQFELPRWTAEHSPRAKAVLFDASGLTRFE QLVALRDFFQPVLKGLDKCPKVVVLGRPPESLKDPVTASVQRSLEGFTRSLGKEIRRG GNVQLLYVGKGAEDQLEGALRFFLSPKSAYVSGQVIRLAANSAQVHDWSKPLAGQRAL VTGAARGIGAAIAETLARDGAEVVLLDVPPAREALEGLAARLGGRAVALDICAADAGQ QLVEALPEGVDIVVHNAGITRDKTLAKMSSDFWNSVINVNLNAPQVLTQALLDGGKLH DNGRVVLLASISGIAGNLGQSNYAVSKAGLIGLAQAWAPALGKRGITINAVAPGFIET QMTAAIPLTIREAGRRMNSMSQGGLPQDVAETVAWFAQPSSGAVSGQVLRVCGQSLLG A" misc_feature 5374126..5375475 /locus_tag="PA4786" /note="3-ketoacyl-(acyl-carrier-protein) reductase; Provisional; Region: fabG; PRK08261" /db_xref="CDD:236207" gene complement(5375590..5376591) /locus_tag="PA4787" /db_xref="GeneID:880495" CDS complement(5375590..5376591) /locus_tag="PA4787" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253475.1" /db_xref="GeneID:880495" /translation="MRDLTDDVALMRPVIDALRASGCDPDRVLVRVGLPPGGLPAGRF PHSAQNLFWKAAADECGEEHVGLHLAEHLPAFHGLLLEYLFLSSDTFGAGLRHSLRYV RLLSDTLQAQLEVEGERAVLSLGESPAINRHFPEMLAGAVIRLFGALTEGEFKPLEVQ LMNETGAPMERYRAVYGCPTILGMPRYALVFDAAVLDKPSRHAAPELLRMHESLARRQ LAEVERLDLVRQVRELIGELLVDGGATLEQVAARLGMPARRLRERLAMAGVRFNDLVT DYRCRLAKELLLKTDERIEVIVERTGFSEPSTFYRAFKRWVGETPVEFRRRGQQGRG" misc_feature complement(5375995..5376528) /locus_tag="PA4787" /note="Arabinose-binding domain of AraC transcription regulator, N-term; Region: Arabinose_bd; pfam12625" /db_xref="CDD:432679" misc_feature complement(5375602..>5376204) /locus_tag="PA4787" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" gene 5376852..5377709 /locus_tag="PA4788" /db_xref="GeneID:880496" CDS 5376852..5377709 /locus_tag="PA4788" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253476.1" /db_xref="GeneID:880496" /translation="MPTAWLDLPAPPALPGLFLRAALRRGIRGKALPERGLRSQVTVD PKHLERYRQVCGFRDDGLLPPTYPHILAFPLQMALLTDKRFPFPLLGLVHLENRIDVL RALGGLGPFTVSVAVENLQPHDKGATFSIVTRLEDQLGLLWVGDSKVLCRGVKVPGEI PPKAEQEPLPLEPVDNWKAPADIGRRYARAAGDYNPIHLSAPSAKLFGFPRAIAHGLW NKARSLAALGERLPASGYRVEVRFQKPVLLPASLTLLASAAAADGQFSLRGKDDLPHM AGHWSRLQG" misc_feature 5377392..>5377589 /locus_tag="PA4788" /note="Acyl-CoA dehydratase PaaZ [Lipid transport and metabolism]; Region: MaoC; COG2030" /db_xref="CDD:441633" gene 5377791..5378096 /locus_tag="PA4789" /db_xref="GeneID:880548" CDS 5377791..5378096 /locus_tag="PA4789" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253477.1" /db_xref="GeneID:880548" /translation="MDLHELTARLHAIRDRNDWRQFHSPKNLAMAASVEMAELVEIFQ WLTEDQSRTLSAEQLEHAGQEVGDIVLYLLLFCGETGLDLEQVVRAKLADCERRFLP" misc_feature 5377809..5378072 /locus_tag="PA4789" /note="Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in mouse RS21-C6 protein and its homologs; Region: NTP-PPase_RS21-C6_like; cd11537" /db_xref="CDD:212144" misc_feature order(5377815..5377820,5377827..5377829,5377836..5377841, 5377845..5377847,5377863..5377868,5377875..5377880, 5377884..5377889,5377896..5377898,5377905..5377910, 5377917..5377922,5377974..5377982,5377986..5377994, 5377998..5378003,5378007..5378009,5378016..5378021, 5378025..5378030,5378034..5378036,5378040..5378045, 5378049..5378057,5378061..5378066,5378070..5378072) /locus_tag="PA4789" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:212144" misc_feature order(5377818..5377820,5377893..5377895,5377902..5377904, 5377983..5377985,5377992..5377994,5378004..5378006) /locus_tag="PA4789" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:212144" misc_feature order(5377854..5377856,5377866..5377871,5377875..5377883, 5377887..5377892,5377899..5377904,5377908..5377910, 5377917..5377922,5378004..5378006) /locus_tag="PA4789" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:212144" gene 5378093..5378842 /locus_tag="PA4790" /db_xref="GeneID:880549" CDS 5378093..5378842 /locus_tag="PA4790" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253478.1" /db_xref="GeneID:880549" /translation="MSDRHFDELATRFAEKIYGGAKGAIRLAVLQADLAEALPERPLR VLDIGAGLGHMSLWLAARGHRVTLAEPAQPMLDGARQRFAEAGQAAEFIQAPWQELLG QLTEPYDLVLCHAVLEWLAEPHAILPVLHQLCAPGGWLSLAFYNRDALIYRNLLKGHF RKLRKERFAGEGQSLTPQRPLDPRELEQALAARWRIEARSGVRVFHDYMPSEFQAKAE RLDLVEMELAYRRHPAFAGLGRYLHWLCRPQ" misc_feature 5378093..5378821 /locus_tag="PA4790" /note="tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM; Region: PRK11036" /db_xref="CDD:182918" gene 5378908..5379528 /locus_tag="PA4791" /db_xref="GeneID:880462" CDS 5378908..5379528 /locus_tag="PA4791" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253479.1" /db_xref="GeneID:880462" /translation="MQSRLLILPLLASLAALGACQGDNPYRASSLPYPPQPATAANPG LDPGAYPAAPRDYARYRSWSWAAAGVSGFPQGLDDNQLRDAVSQQLDQRGLRPARPGS AADLQVSAFLRNELRTRQVTDYYGGYYGNYGGWRDPWYGYGASYPVTRSYTVQVTVVR VELNDARSGQPVWGNSAEFDSGDSASEQAKALREAVKRALSSYPPG" misc_feature 5379073..5379522 /locus_tag="PA4791" /note="Domain of unknown function (DUF4136); Region: DUF4136; pfam13590" /db_xref="CDD:463929" gene complement(5379513..5380448) /locus_tag="PA4792" /db_xref="GeneID:880463" CDS complement(5379513..5380448) /locus_tag="PA4792" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253480.1" /db_xref="GeneID:880463" /translation="MNRSIAILLLGLSLSGCVEARSVVPADGPGPLLVAHRAGTADYP ENTLLAIRKALDNGADALWLSVQLSADGHPVLYRPADLAVLTQGAGAVGQSSLAELAR LNAGYMFKAEDGSYPYRQKPLRIPTLRQALRAIPPQVPVFLDMKSLPVEPLVDAVAGE LERQKAWSRVRFYSTEKAANDYLTQRYADRARQFESRDATRNRLVGLAFGERCEAPPA GGTWMGIELRRELTVTERFTLGESSYKVPAAQLWTRKAMDCVRREPVKVVMFGIETAE DYRTARTLGADAVMSNSPRKMEAIRRRVLADQPGG" misc_feature complement(5379558..5380358) /locus_tag="PA4792" /note="Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins; Region: GDPD_Rv2277c_like; cd08580" /db_xref="CDD:176522" misc_feature complement(order(5379639..5379641,5379930..5379932, 5380017..5380019,5380215..5380217,5380254..5380256, 5380260..5380262,5380341..5380343)) /locus_tag="PA4792" /note="putative active site [active]" /db_xref="CDD:176522" misc_feature complement(order(5380215..5380217,5380341..5380343)) /locus_tag="PA4792" /note="catalytic site [active]" /db_xref="CDD:176522" misc_feature complement(order(5380017..5380019,5380254..5380256, 5380260..5380262)) /locus_tag="PA4792" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:176522" gene 5380580..5381143 /locus_tag="PA4793" /db_xref="GeneID:880439" CDS 5380580..5381143 /locus_tag="PA4793" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253481.1" /db_xref="GeneID:880439" /translation="MIRRILLLGLLLSLAACETTQLDRDFDSSRDFAAYRSWSWSQPA FEYRPDDPRIKSDLTEQRIREAVAQQLDQRGLRPAQGNARGDVTVRAYLIVDDRQDQI TTNYGGGYWGGYWGGYWGGPAMAETRTVNYKVATLQVDLFDGKDGKLVWRGSGEQIMR TSPPSPAEREQAIRETVQKVMSQYPPR" misc_feature 5380652..5381137 /locus_tag="PA4793" /note="Domain of unknown function (DUF4136); Region: DUF4136; pfam13590" /db_xref="CDD:463929" gene 5381145..5381627 /locus_tag="PA4794" /db_xref="GeneID:880440" CDS 5381145..5381627 /locus_tag="PA4794" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253482.1" /db_xref="GeneID:880440" /translation="MQLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAA AIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMEN LAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHDPDGRRVALIQMDKPLEP " misc_feature 5381160..5381618 /locus_tag="PA4794" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" gene 5381617..5381994 /locus_tag="PA4795" /db_xref="GeneID:880423" CDS 5381617..5381994 /locus_tag="PA4795" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253483.1" /db_xref="GeneID:880423" /translation="MNPDTHAQRVLIIVSSGPSTPARCAAPFHTATLLACMDAEVTLF LSGEGVQLARRAVADQLRALDGGEPLRHFIRQAREAGARLLMCRQPGVNIDESELIEE LDEISSGGELARLILESERVLTL" misc_feature 5381635..5381991 /locus_tag="PA4795" /note="Predicted peroxiredoxin, DsrE/DsrF-like family [General function prediction only]; Region: COG2044" /db_xref="CDD:441647" gene 5381991..5382458 /locus_tag="PA4796" /db_xref="GeneID:880424" CDS 5381991..5382458 /locus_tag="PA4796" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253484.1" /db_xref="GeneID:880424" /translation="MSANLHGLEFPDGLFYAPDYNLWLREEVDGSLTLGLSAYGCALY GEIFAFTPKRDGWHIERDRSFGVVEFAKAASSARSPLAGTLLASNPAVVKRPALINRD CYGEGWMVRLQPDDWASARSAFLQGDAAREAFAERMRLDGFDPQHPGVQALDF" misc_feature 5382015..5382401 /locus_tag="PA4796" /note="Glycine cleavage system protein H (lipoate-binding) [Amino acid transport and metabolism]; Region: GcvH; COG0509" /db_xref="CDD:440275" gene complement(5382796..5383812) /locus_tag="PA4797" /db_xref="GeneID:880407" CDS complement(5382796..5383812) /locus_tag="PA4797" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_253485.1" /db_xref="GeneID:880407" /translation="MNLSRIGLDLAKQVFQVHGVDRHEHVVCRRQLKRAQVRDFFRQL PPCLVAMEACGSAHYWARELRELGHTVRLIAPQFVKPYVKGDKHDAHDAEAICEAASR PSMRYVPVKSAEQQAVQSMHRVRSRLVRARTALCNEVRGLLGEFGLIATRRGRAATMA LLETVMATEPAPLPAPMGELLRELKDELQTLEARIARLERQIQAHVRGDARIQRLLAV EGIGPISASAVAASAGDARQFRTGRQFAAWLGLVPRQHSTGGQQRLGNISKRGDTYLR TLLIHGARAVVRCCANKTDARSRWLQGLLQRRPANVVAVALANKNARILWALLSRETC YRPG" misc_feature complement(5382814..5383797) /locus_tag="PA4797" /note="IS110 family transposase; Region: transpos_IS110; NF033542" /db_xref="CDD:468073" gene 5383947..5384675 /locus_tag="PA4798" /db_xref="GeneID:880408" CDS 5383947..5384675 /locus_tag="PA4798" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253486.1" /db_xref="GeneID:880408" /translation="MSSPQPPRFDGQRWSNADDDRIEVLPADPAWPQHFAAEAEAIRT ALALPGLGIEHVGSTAVPGLDAKPIIDILLLPPPGHDPQRLVAPLEGLGYQFWRENPN TQRMFFVKGMPPFGHGRTHHVHVMPLAQADRYLLFRDWLRNHPDDARLYAETKHALAR RYPTDREAYTRGKDEVVARILGRALAATRHPMIQSGLVRGEREMHARELRETLVAGAE STPGGPADTAYFESLRSRVSKPQD" misc_feature 5384007..5384507 /locus_tag="PA4798" /note="GrpB domain, predicted nucleotidyltransferase, UPF0157 family [General function prediction only]; Region: GrpB; COG2320" /db_xref="CDD:441894" gene complement(5384698..5385276) /locus_tag="PA4799" /db_xref="GeneID:880308" CDS complement(5384698..5385276) /locus_tag="PA4799" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253487.1" /db_xref="GeneID:880308" /translation="MTCVEAERGAPLRVVVVGTSGAGKSTFSAALAARLGCTHVELDR LYWGPGWQAVPHERFEHAVERATTAPRWVADGNYSAVRELLWGRATHVVWLNFGRWTV FSRVLRRTLARGLLRTRLSHGNRESLRMAFCSRDSILLWSWTTFAGNRRKYTGLREDP RFAHLRWVEVGEPGRVGEVIERLVEAALAQSQ" misc_feature complement(<5384845..5385240) /locus_tag="PA4799" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" gene complement(5385273..5386073) /locus_tag="PA4800" /db_xref="GeneID:880309" CDS complement(5385273..5386073) /locus_tag="PA4800" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253488.1" /db_xref="GeneID:880309" /translation="MTDLEHAVESNRRAWDASADSHLRGGGWQELSLAVQETGFSCLD ETLAGVLRNLDLAGKAAVQVGCNNGREVLSLYAFGVARAVGIDQSAAFLAQARQLAER SPHQPRFVEANAYELPAELNGQFDLLLITIGVLNWMPDIARFFASVSGLLKPGGQLAI YETHPFLEMLEPESERPFELRNDYFTDTPHVSREAIVYEGSGSDTGIASYWYVHPLGD ILGGLLGAGLRLSHFKEYPHSNREELYDLYEDGPLAIPMCYTLVAVKA" misc_feature complement(5385594..5385944) /locus_tag="PA4800" /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase [Coenzyme transport and metabolism]; Region: UbiG; COG2227" /db_xref="CDD:441829" gene complement(5386369..5386737) /locus_tag="PA4801" /db_xref="GeneID:880269" CDS complement(5386369..5386737) /locus_tag="PA4801" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253489.1" /db_xref="GeneID:880269" /translation="MLGVAADETPAQIVAAVTDYVRDAREQGRSLDDEAVFALGALIG AQYVRGLGWHWGDVTWDGDPDSAAVGVLSPDESLFNNPIGWVGQIAESGGGVPFMLSY NMILANQVPLFERGSATGLY" gene 5387000..5387722 /locus_tag="PA4802" /db_xref="GeneID:880270" CDS 5387000..5387722 /locus_tag="PA4802" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253490.1" /db_xref="GeneID:880270" /translation="MTLIAAAQSCAHPADLPRNLDDHLRLMRIAQARGVRLLVFPELS LTGYEPTAAAALAQPADTPLLQPLRQLAEQARMTTVVGLPLRSPKHAKPLIAALILGA DGSLGVYAKQHLHAGEERHFSAGDGGPLLEIDGLPMALAVCADFSQPSHPAHAARAGA RLYIASALIGENGYPADSALLAGYAREHGMGVLLANHGGPTGGWKAAGRSAFWNERGA LVRETTGTGETLLLLERTEIDA" misc_feature 5387009..5387716 /locus_tag="PA4802" /note="Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate [Energy production and conversion]; Region: Nit2; COG0388" /db_xref="CDD:440157" gene complement(5387766..5387857) /locus_tag="PA4802.1" /db_xref="GeneID:3240273" tRNA complement(5387766..5387857) /locus_tag="PA4802.1" /product="tRNA-Sec" /db_xref="GeneID:3240273" gene complement(5387990..5388607) /locus_tag="PA4803" /db_xref="GeneID:880251" CDS complement(5387990..5388607) /locus_tag="PA4803" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253491.1" /db_xref="GeneID:880251" /translation="MSEREHWQRVYESKPSDAVSWFQAEATLSLDLIRRIGAPREAAI IDVGGGASTLVDGLLAEGFGDLTVLDLSDAALRVARNRLGARGEEVRWIAGDITGVDL PEATYDVWHDRAVFHFLTTAEARRAYVRQVMKAVRHGGHVIVATFAADGPTECSGLPV MRYDADELHAEFGSAFQLTEHRDEHHVTPAGRVQHFVYCHCLKRL" misc_feature complement(5388146..5388517) /locus_tag="PA4803" /note="Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Region: UbiE; COG2226" /db_xref="CDD:441828" gene complement(5388702..5390099) /locus_tag="PA4804" /db_xref="GeneID:880252" CDS complement(5388702..5390099) /locus_tag="PA4804" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_253492.1" /db_xref="GeneID:880252" /translation="MDDNKNKVLRLRDVVLYTVSAMLFMDQIALASSLGPSSLFWWLY VLVLLFLPMAMMTSELGTAFPANGGVYHWVRSAFGFRWGARVSWMYWVNNALWMPSVY TLFGSMLGAFYFPELSLWGKIAIGIALALLTAAFNVVALRLGKWLPNLGALLKLLAVL ALGVGGLHFGWNHGFANDFSLDSIVPSSPGQMAALGVMVYGIMGTELACCSAAEMRNA RRDIPRAVLISGLIVGAFNIFGTLGVLAAVPAEETDVTRIFAHTLYNIYGHDGAGGML ADLVGAFVLFTLFTNMVTWSMGTNRAAVEAAKAGELPALFGVVHSRHGTPIGSAVLAS AVSIVLLLLYGLVAHTAEELFWTLLSIFAMVFMMPYVLMCLAFVRLRRADPRPRPYRM PLGDRLASLWALFVALHVLAGICLFVVTPGAPMDWAYAGKIVGGVALALAVGELLIRQ AARRRGVMSLRGAYG" misc_feature complement(5388804..5390081) /locus_tag="PA4804" /note="Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; Region: PotE; COG0531" /db_xref="CDD:440297" gene complement(5390148..5391554) /locus_tag="PA4805" /db_xref="GeneID:880237" CDS complement(5390148..5391554) /locus_tag="PA4805" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253493.1" /db_xref="GeneID:880237" /translation="MNARLHATSPLGDADLVRADQAHYMHGYHVFDDHRVNGSLNIAA GDGAYIYDTAGNRYLDAVGGMWCTNIGLGREEMARTVAEQTRLLAYSNPFCDMANPRA IELCRKLAELAPGDLDHVFLTTGGSTAVDTAIRLMHYYQNCRGKRAKKHVITRINAYH GSTFLGMSLGGKSADRPAEFDFLDERIHHLACPYYYRAPEGLGEAEFLDGLVDEFERK ILELGADRVGAFISEPVFGSGGVIVPPAGYHRRMWELCQRYDVLYISDEVVTSFGRLG HFFASQAVFGVQPDIILTAKGLTSGYQPLGACIFSRRIWEVIAEPDKGRCFSHGFTYS GHPVACAAALKNIEIIEREGLLAHADEVGRYFEERLQSLRDLPIVGDVRGMRFMACVE FVADKASKALFPESLNIGEWVHLRAQKRGLLVRPIVHLNVMSPPLILTREQVDTVVRV LRESIEETVEDLVRAGHR" misc_feature complement(5390151..5391539) /locus_tag="PA4805" /note="aminotransferase; Region: PRK07036" /db_xref="CDD:235913" misc_feature complement(order(5390667..5390669,5390748..5390753, 5390757..5390759,5390856..5390858,5391069..5391071, 5391075..5391080,5391174..5391182)) /locus_tag="PA4805" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99735" misc_feature complement(order(5390667..5390669,5390748..5390750, 5390757..5390759,5390856..5390858,5391075..5391080, 5391174..5391179)) /locus_tag="PA4805" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature complement(5390667..5390669) /locus_tag="PA4805" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 5391836..5392519 /locus_tag="PA4806" /db_xref="GeneID:880238" CDS 5391836..5392519 /locus_tag="PA4806" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253494.1" /db_xref="GeneID:880238" /translation="MISLERKGHAPTLLYERGIAERFREAIIRRYFSRGYLLDPFCLA VEEGLPEGFYTLGEIAPDDFFQSAYYQTYYLGAGAVEDVYYILDLGPTEKLSICLYNG LSASRYSDAQVAALAGLAPPVLELARQFCAGRADLSPNPQADLAPRLQEVLRGFGRGV LTDREREACHLLLSGHSAKSSARLMDISPETVRMHRKNLYTKLEVGSQSELFALFIEC LSQGQRVGP" misc_feature <5392172..5392486 /locus_tag="PA4806" /note="DNA-binding transcriptional regulator, CsgD family [Transcription]; Region: CsgD; COG2771" /db_xref="CDD:442052" gene complement(5392523..5394448) /gene="selB" /locus_tag="PA4807" /db_xref="GeneID:880197" CDS complement(5392523..5394448) /gene="selB" /locus_tag="PA4807" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="selenocysteine-specific elongation factor" /protein_id="NP_253495.1" /db_xref="GeneID:880197" /translation="MIVGTAGHIDHGKTSLLRALTGIEGDRRPAERQRGITIDLGYLY ADLGDGSPTGFIDVPGHERFVHNMLAGASGIDCVLLVVAADDGLMPQTREHLAIVELL GIRRALVALTKIDRVEPQRVQQVRTQVEHLLASGPLARSPIFPLSSSTGEGVEALREA LGGLAGEVRERSREGYFRLAVDRAFSVAGSGIVVTGTAFSGQVAVGDELLLGNAGRPV RVRGLHAQNRPAQQAWAGQRVALNIAGERLALEQIQRGDWLLQAALHAPTTRVDIDFR LLPDELRDFTHWTPVHLHLGTQDVTGRLALLEGEQLEPGHRAFAQLVLNAPIQALHGD RLVLRDQSAQRTLGGGRVLDGAAPARNRRTPARLAQLQALRQESLEEALPTLLGAAEN GLDPQRLVQSFNRPREHWRLPEEVVEVQTRLGPRLFAGERWFALVEQLLAGLRRFHEE LPDELGPDRDRLRRYALPQLERPVFIALLDAALAGGDVHSSGPWLHLPGHEVRLSDSE EQLRARLWPLLEAGRYDPPWVRDLARELRQDEAVMRNLLRKLARLGQLQQVVRDLFYP EATLRQLAEIAVQVRDPAGLIRPAEFRDRLGIGRKRSIQILEHFDRIGLTRRIGNDRR LREGSALAEQLLGGVSP" misc_feature complement(5392565..5394448) /gene="selB" /locus_tag="PA4807" /note="Selenocysteine-specific translation elongation factor SelB [Translation, ribosomal structure and biogenesis]; Region: SelB; COG3276" /db_xref="CDD:442507" gene complement(5394445..5395851) /gene="selA" /locus_tag="PA4808" /db_xref="GeneID:880198" CDS complement(5394445..5395851) /gene="selA" /locus_tag="PA4808" /EC_number="2.9.1.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="selenocysteine synthase" /protein_id="NP_253496.1" /db_xref="GeneID:880198" /translation="MSSVRLPSVDRLLRSAAAAPLHQRYGREALLATLRDLLDELREP ARHGALAEIELSEAVLAGRAGERLAAQHASRVRRVFNLTGTVLHTNLGRALLPDEAIE AITLAARYPLNLEFDLASGKRGDRDDLIAGLIRELTGAEAVTVVNNNAAAVLLALNSL GARKEGIISRGELIEIGGAFRIPDIMARAGVRLHEVGTTNRTHAKDYEAAIGPRSGLL MRVHTSNYSVQGFTASVPTAQLAAIAHGHGLPLLEDLGSGTLVDLTRWGLPKEPTVQE ALADGADIVTFSGDKLLGGPQAGLILGNRELIGRIKKNPLKRALRVDKLTLAALEAVL GLYRDPDRLAERLTTLRLLSRPAAEIRAQAERLAPALGEALGEGWEVAVVDALGMIGS GAQPVARLASAALCLRPRQPRRLRGRALRNLEEALRGLPLPVIGRLDDDALWLDLRQL DDEPAFLAQLPRLRSELS" misc_feature complement(5394472..5395839) /gene="selA" /locus_tag="PA4808" /note="L-seryl-tRNA(Sec) selenium transferase; Region: selA; TIGR00474" /db_xref="CDD:273099" gene complement(5395930..5396859) /gene="fdhE" /locus_tag="PA4809" /db_xref="GeneID:880170" CDS complement(5395930..5396859) /gene="fdhE" /locus_tag="PA4809" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="formate dehydrogenase subunit epsilon" /protein_id="NP_253497.1" /db_xref="GeneID:880170" /translation="MSRTILQPGQIEAAANIPPHLHQPSRDLFARRGERLLQLAEGHP MGDYLRLVAGLCRLQQALLDNPPALAPLDPERLRKSREHGMPPLAYDLLVREGAWLPW LDALLAGYPAPANAAVGAALEQLREAEEGQRKAWAIALLSGQFDLLPAALVPFLGAAL QVAWSHWLLGLEEGAVVETESRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEW HYVRIKCSHCEESKHLAYLSLEHDGQPAEKAVLRAETCPSCQGYLKQFYLEFDRHADA LADDLASLALDMRLAEDGYLRRSPNLLLAPGGE" misc_feature complement(5395942..5396856) /gene="fdhE" /locus_tag="PA4809" /note="formate dehydrogenase accessory protein FdhE; Region: FdhE; TIGR01562" /db_xref="CDD:130625" gene complement(5396992..5397618) /gene="fdnI" /locus_tag="PA4810" /db_xref="GeneID:880192" CDS complement(5396992..5397618) /gene="fdnI" /locus_tag="PA4810" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nitrate-inducible formate dehydrogenase subunit gamma" /protein_id="NP_253498.1" /db_xref="GeneID:880192" /translation="MKNEIQRYNANERSNHWAVAILFFMAGLSGLALFHPALFWLTNL FGGGPWTRILHPFLGLAMFVFFLGLVVRFAHHNRVQKSDIQWLKQWRDVVSNREENLP EVGRYNAGQKLLFWVLLLSMLTLLVTGIVIWRQYFSAWFGIEAIRLSALLHAFAAFVL IASIIVHIYAGIWVKGSMGAMLYGKVSRAWARKHHNGWLKEVGKGEEH" misc_feature complement(5396998..5397618) /gene="fdnI" /locus_tag="PA4810" /note="Cytochrome b subunit of formate dehydrogenase [Energy production and conversion]; Region: FdnI; COG2864" /db_xref="CDD:442111" gene complement(5397690..5398619) /gene="fdnH" /locus_tag="PA4811" /db_xref="GeneID:880193" CDS complement(5397690..5398619) /gene="fdnH" /locus_tag="PA4811" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nitrate-inducible formate dehydrogenase subunit beta" /protein_id="NP_253499.1" /db_xref="GeneID:880193" /translation="MSSQDIHARSATTTPMPSVRNQEEVAKLIDVSKCIGCKACQVAC SEWNELRDEVGHNHGTYDNPMDLTADSWTVMRFTEHENEAGNLEWLIRKDGCMHCAEP GCLKACPSPGAIVKYANGIVDFNQDKCIGCGYCITGCPFDIPRISQKDHKAYKCSLCS DRVSVGMEPACVKTCPTGAIVFGSKEDMKEHAAERIVDLKSRGYENAGLYDPEGVGGT HVMYVLHHADKPSLYAGLADQPSVSPLVSLWKGVTKPLALLAMGATVLAGFFHYVRVG PNRADDEEDHGQAEAPVHQVDPSVHTFDPHERR" misc_feature complement(5397762..5398607) /gene="fdnH" /locus_tag="PA4811" /note="formate dehydrogenase, beta subunit, Fe-S containing; Region: FDH-beta; TIGR01582" /db_xref="CDD:273705" gene complement(5398628..5401708) /gene="fdnG" /locus_tag="PA4812" /db_xref="GeneID:880124" /db_xref="PseudoCap:PA4812" CDS complement(5398628..5401708) /gene="fdnG" /locus_tag="PA4812" /note="'Product name confidence: class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in, if known).'" /codon_start=1 /transl_except=(pos:complement(5401118..5401120),aa:Sec) /transl_table=11 /product="formate dehydrogenase-O major subunit" /protein_id="YP_003933614.1" /db_xref="GeneID:880124" /db_xref="PseudoCap:PA4812" /translation="MDMNRRQFFKVCGIGLGGSSLAALGMAPTEAFADQVRHFKLAHT VETRNTCTYCSVGCGLIMYSQGDGAKNVAQNIIHIEGDADHPVNRGTLCPKGAGLLDY IHSPNRLKYPEVREAGSSEWKRIEWDEALERIAKLMKEDRDANFVEKNEQGQTVNRWL TTGFLAASASSNEAGYITHKVMRSLGILGFDNQARVUHGPTVASLAPTFGRGAMTNHW TDIKNADLVLIMGGNAAEAHPCGFKWVTEAKAHNKARLLVVDPRFTRSASVADYYAPI RTGTDIAFLGGLINYLLENDKIQHEYVRNYTDVSFIVKEGFSFEDGLFNGYDAEKRTY PDKSSWGYEIGEDGYAKVDPTLTHPRCVFNLLKQHYSRYTPDVVSNICGTPKDMMLKV WAEIAETSKPGKVMTIMYALGWTQHSVGAQMIRTGAMVQLLLGNIGMPGGGMNALRGH SNIQGLTDLGLLSNSLPGYLTLAMDAEQDYDAYIAKRTAKPLRPGQLSYWQNYGKFHV SLMKAWFGKSATKENNWCYDWLPKLDMPGAGYDVLRYFDMMYQGKVNGYFCQGFNPIA SFPNKAKVGAALARLKWMVVMDPLVTETSEFWRNVGEYNDVDTASIKTTVFRLPTSCF AEEDGSIVNSGRWLQWHWKGAEPPGQARPDIAIMAGLFHRLREMYRKDGGAFPDPILG LDWSYLKPDEPGPDELAREFNGKALSDLVDPANGMILAKAGEQLPGFALLRDDGSTAS GCWIFAGSWTQQGNQMGRRDNSDPYGMGQTLGWAWAWPANRRILYNRASADVSGKPWD PEKKRLVWWNGKSWGGTDVPDYKADVPPEAGMNPFIMNPEGVARLFAVDKMAEGPFPE HYEPFETPIGVNPLHRDNRKAISNPAARVFKNDMELFGTADEFPYAATTYRLTEHFHY WTKHCRLNAITQPEQFVEIGEALAKELGINAGDKVKVSSNRGYIKAVAVVTKRIRPLQ VDGKTVHHVGIPIHWGFAGMARNGFLANTLTPFVGDGNTQTPEFKSFLVNVEKA" misc_feature complement(5398634..5401705) /gene="fdnG" /locus_tag="PA4812" /note="Molybdopterin-Binding (MopB) domain of the MopB superfamily of proteins, a large, diverse, heterogeneous superfamily of enzymes that, in general, bind molybdopterin as a cofactor. The MopB domain is found in a wide variety of molybdenum- and...; Region: Molybdopterin-Binding; cl09928" /db_xref="CDD:447860" misc_feature complement(order(5400989..5400994,5401430..5401432, 5401535..5401537,5401547..5401552,5401556..5401558)) /gene="fdnG" /locus_tag="PA4812" /note="[4Fe-4S] binding site [ion binding]; other site" /db_xref="CDD:239153" misc_feature complement(order(5399747..5399749,5399843..5399845, 5399933..5399935,5399942..5399950,5400008..5400010, 5400020..5400028,5400359..5400364,5400458..5400463, 5400470..5400478,5400866..5400868,5400872..5400874, 5400923..5400931,5400998..5401003,5401010..5401012, 5401016..5401018,5401118..5401120,5401130..5401132, 5401424..5401426)) /gene="fdnG" /locus_tag="PA4812" /note="molybdopterin cofactor binding site; other site" /db_xref="CDD:239153" gene complement(5402016..5402945) /gene="lipC" /locus_tag="PA4813" /db_xref="GeneID:880125" CDS complement(5402016..5402945) /gene="lipC" /locus_tag="PA4813" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="lipase LipC" /protein_id="NP_253500.1" /db_xref="GeneID:880125" /translation="MNKNKTFLAAALVALAASFPVHAATDYTRTRYPIVLSHGLFGFK SVGPVDYWHAIVPALEKDGAKVFATSQSPVNSNEVRGEQLLAQVEEVLALTGAEKVNL IGHSQGGMTVRYVAGVAPQLVASVTTMGTPHKGTPVADAVTGFSEFLGPIGTEVIASA VEALFSVVDIVDGGEWVKGDALAALNSLNTPGTARFNQRFPQAIPASACGQGAETVAG VRYYSMSGTGSLTNALDPSSAGLAVTGLLFGEANDGLVGQCSSHLGSVVKDNYRMDHL DEVNQLLGLVSLFESDPTQVYRQHANRLRNVGL" misc_feature complement(5402544..5402867) /gene="lipC" /locus_tag="PA4813" /note="Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and metabolism]; Region: EstA; COG1075" /db_xref="CDD:440693" gene 5403305..5405350 /gene="fadH2" /locus_tag="PA4814" /db_xref="GeneID:880156" CDS 5403305..5405350 /gene="fadH2" /locus_tag="PA4814" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2,4-dienoyl-CoA reductase" /protein_id="NP_253501.1" /db_xref="GeneID:880156" /translation="MRTPYPPLAAAPYPHLLAPLDLGFTRLRNRVVMGSMHTGLEDRL WDFGKLAAYYRERARGGVGLIVTGGFAPCREGWLLPFGSSLTSALEVPAHRRLTQAVH AEGGKILLQILHAGRYGYHPMAVSASPLKSPISWFTPRELSERGIRKTIRAFVRCARL AKAAAYDGVEVMGSEGYLLNQFLCPRTNRRDDQWGGPLENRMRLALEIVRGIRRIVGQ RFILCYRLSLLDLVEGGNTWDEVRRIALALEEAGITLLNTGIGWHESRVPTIVTSVPR AAFAEVSARLRHELKVPVIASNRINTPEVAESLLATDKADLVSMARPLLADPQFVAKA GAGRAEEINTCIACNQACLDHAFANRRATCLVNPRAAFETELRYRKARTQKRIAVIGA GPAGLSAACVAAERGHRVSLFEASGEIGGQFNLAKRIPGKEEFRETLRYFRVRLERLG VDLRLGHRVRQGELDGQFDDVVVATGIQPRRPRIDGIGGPTVLSYVDVLRGAPVGARV AIVGAGGIGFDVAAFLVAAPSDGQPRALGEWLAEWGVDLDNSQPGGLREPAPTRPARQ VWLLQRKPGAPGAQLGKTSGWVHRAHLRHNAVRMLGGVEYLKIDERGLLIRVDGVERW LEVDNVVICAGQEPLRELQIRQATESLRFHLIGGARVAGELDAKRAIREGAMLAARL" misc_feature 5403350..5404408 /gene="fadH2" /locus_tag="PA4814" /note="2,4-dienoyl-CoA reductase (DCR) FMN-binding domain. DCR in E. coli is an iron-sulfur flavoenzyme which contains FMN, FAD, and a 4Fe-4S cluster. It is also a monomer, unlike that of its eukaryotic counterparts which form homotetramers and lack the...; Region: DCR_FMN; cd02930" /db_xref="CDD:239240" misc_feature order(5403407..5403409,5403413..5403415,5403509..5403511, 5403635..5403637,5403827..5403829,5403833..5403835, 5403860..5403862,5403977..5403979,5404091..5404093, 5404100..5404102,5404265..5404270,5404337..5404339, 5404346..5404348,5404358..5404360,5404394..5404396) /gene="fadH2" /locus_tag="PA4814" /note="active site" /db_xref="CDD:239240" misc_feature order(5403407..5403409,5403413..5403415,5403509..5403511, 5403635..5403637,5403977..5403979,5404265..5404270) /gene="fadH2" /locus_tag="PA4814" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:239240" misc_feature order(5403827..5403829,5403833..5403835,5403860..5403862, 5404091..5404093,5404100..5404102) /gene="fadH2" /locus_tag="PA4814" /note="2,4-decadienoyl-CoA binding site; other site" /db_xref="CDD:239240" misc_feature 5403833..5403835 /gene="fadH2" /locus_tag="PA4814" /note="catalytic residue [active]" /db_xref="CDD:239240" misc_feature order(5404337..5404339,5404346..5404348,5404358..5404360, 5404394..5404396) /gene="fadH2" /locus_tag="PA4814" /note="4Fe-4S cluster binding site [ion binding]; other site" /db_xref="CDD:239240" misc_feature <5404415..>5404867 /gene="fadH2" /locus_tag="PA4814" /note="NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; Region: GltD; COG0493" /db_xref="CDD:440259" misc_feature 5404529..>5405218 /gene="fadH2" /locus_tag="PA4814" /note="NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism]; Region: FadH2; COG0446" /db_xref="CDD:440215" gene 5405559..5406008 /locus_tag="PA4815" /db_xref="GeneID:880157" CDS 5405559..5406008 /locus_tag="PA4815" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253502.1" /db_xref="GeneID:880157" /translation="MPTPPWWLFVLPLLAGACLPLQAGINGQLAKQVSSVLAAALISF FVGTLGLLALTLSQREFPGLAALRGLSWWHWCGGFLGMFFIFIAAFAAPRIGALMFMV LVLAGQLGMAMSLDHFGWAGFREAPISALKLGGLALIGAGIWMIRKG" misc_feature 5405571..5406005 /locus_tag="PA4815" /note="Uncharacterized membrane protein YdcZ, DUF606 family [Function unknown]; Region: ydcZ; COG3238" /db_xref="CDD:442470" gene 5406165..5407400 /locus_tag="PA4816" /db_xref="GeneID:880098" CDS 5406165..5407400 /locus_tag="PA4816" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253503.1" /db_xref="GeneID:880098" /translation="MSFSRTLGDGRINLEQQRKRAKELLRQWRRDPASRTGLPGQAPR LADAQWQVARELGFASWPRLKAHVDAIAFASRHPDLVGGDEAATLHLRCGNDIAHGLK LAGFRGDFRMFADPLTMGPVPNLPLPEFLALRSDYLSRAFDLDPADAQARQRQEYAGL ERLGEYSRVALWCEADAYDQLFLVRVLAGMQTPPEHLELIEIDRVPGVERFVGIGQLA PELLAWLWTQRRPLDAEALALARAAWDAYRDPAPLRWAQLAAAPTPALPLLGPALRRQ LHELPALRDGLSLSERLTLEIVRDGERPSAGQVFAELTARREPLPYLGDLMFRVLLRA LLEEPGALLRTPAPELPWERQPLALTAAGREVLAGRRYRLDLGAPERWVGGVCLRAGT AHWALDEQDRPVWREDPRH" misc_feature 5406429..5406767 /locus_tag="PA4816" /note="Domain of unknown function (DUF1835); Region: DUF1835; pfam08874" /db_xref="CDD:430278" gene 5407376..5407870 /locus_tag="PA4817" /db_xref="GeneID:880099" CDS 5407376..5407870 /locus_tag="PA4817" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253504.1" /db_xref="GeneID:880099" /translation="MAGGPSALTLIARTSATGAQPLSLRARFPRTRPPMKKIPLAAAD PDRLDTWVKYREGLCGECNATCCTLPVEVRIDDLIRMRLVDEFEREEPAKRIAKRLEK DGVIEHFNHKREIFTLTRMANGDCLYLDRKTRLCTIYARRPDTCRNHPRIGPRPGYCA YRPR" misc_feature 5407547..5407855 /locus_tag="PA4817" /note="Putative zinc- or iron-chelating domain; Region: CxxCxxCC; pfam03692" /db_xref="CDD:308985" gene complement(5407873..5409309) /locus_tag="PA4818" /db_xref="GeneID:880067" CDS complement(5407873..5409309) /locus_tag="PA4818" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253505.1" /db_xref="GeneID:880067" /translation="MRALRGWPLAWFLLALAFAIRLLSLGSYPLMDTTEARYGEVARK MAELGDWITPWYDVGVPFWGKPPLAFWLSAGGQLLLGANEFASRLPHWLLGVLVLWLV WDWQAREDRRQARIACVLLGSSALFFVASGAVMTDMALALALVLAMRGFWLGLHGAEG IRRREGWLMFLGLGLGLLAKGPLTLILAGLPIGLWALLEWRWRALWRGLPWIRGSLLM LLVAAPWYLLAELKTPGFLEYFLLGEHWQRFVTAGWDGDRYGNAHAYPYGSVWLFLLA AAFPWSLWLPLLLWLGWRQRGEVVDGVASRRRYWLFWGLAPCLFFTFAGNVLWTYVLP GLPALALLAADLLRAPLARSAWLRRGGLACLALTPLLFALFLGSLLLGSRAEQKSTAA LLASDAGWRERPLVFWPKRPYSAVFYSGGRAQRAEDSELAGWLRRDALLAIRSRSFGA LPDEVRQRLRCRPPVGQYQLCQGVAPPG" misc_feature complement(<5408572..5409309) /locus_tag="PA4818" /note="PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA [Cell wall/membrane/envelope biogenesis]; Region: ArnT; COG1807" /db_xref="CDD:441412" gene complement(5409306..5410280) /locus_tag="PA4819" /db_xref="GeneID:880068" CDS complement(5409306..5410280) /locus_tag="PA4819" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycosyl transferase family protein" /protein_id="NP_253506.1" /db_xref="GeneID:880068" /translation="MMIEPSLASKLEAPCLLSVVVPVFNEEAVLPAFHQRLGAVLGDL GDDCEVLYVDDGSTDRSAAILAQLQAADRRVGVARFTRNFGKEQAMSAGLKLSRGAAV IVIDADLQDPPELIPQMLDAWIGGAEMVNMRRRSRAGESWLKRASASAFYRLINRLSE VPIPRDVGDFRLLDRRVVDALCELPEGNRFMKGLFAWVGFRQVDIAYSRAARVAGHSK WRYWRLWNFALEGITGFSTAPLKVAGYLGLLSLLAALATLLAGIFGQQEIHEHWPVIA ALFLIGGLQLLAIGVCSEYLGRMTMEARRRPLYLIDRYLPAQVGGANP" misc_feature complement(5409681..5410226) /locus_tag="PA4819" /note="Bacterial DPM1_like enzymes are related to eukaryotic DPM1; Region: DPM1_like_bac; cd04187" /db_xref="CDD:133030" misc_feature complement(order(5409957..5409959,5410209..5410211, 5410215..5410217)) /locus_tag="PA4819" /note="Ligand binding site [active]" /db_xref="CDD:133030" misc_feature complement(order(5409957..5409962,5410116..5410118)) /locus_tag="PA4819" /note="Putative Catalytic site [active]" /db_xref="CDD:133030" misc_feature complement(5409957..5409965) /locus_tag="PA4819" /note="DXD motif [active]" /db_xref="CDD:133030" gene complement(5410277..5410639) /locus_tag="PA4820" /db_xref="GeneID:880058" CDS complement(5410277..5410639) /locus_tag="PA4820" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253507.1" /db_xref="GeneID:880058" /translation="MLLGRFVSVGAGATAVHYLVLTLLVEGFAVGAAVAAATGAGCGA LAAYLGHRRKTFRHRGPVFRSLPRFFAVSLLCVLGNAVLVLLLGDLAGLDYRLAQLAA TGALLLATYHLHRLWTFS" misc_feature complement(5410283..5410627) /locus_tag="PA4820" /note="GtrA-like protein; Region: GtrA; pfam04138" /db_xref="CDD:427738" gene 5410876..5412237 /locus_tag="PA4821" /db_xref="GeneID:880059" CDS 5410876..5412237 /locus_tag="PA4821" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_253508.1" /db_xref="GeneID:880059" /translation="MSLLRDAWRHAPTHHRVWALAGPMILSNVSVPLVHLVDSTVVGH LPHAYQLGAVAVGGSLYTLMVGVLGFLRMGTTGFAAQAAGRDDGGALRLILAQGLGMA LLLALLLGALALPLSGWALQLMQPSAELTGEARAFFHTRLLGLPAALASYALVGWFLG TQNARAPLAILLTTNLSNIALVLWFVHGLDWGVQGAARASVLAEWSGALLGLALTRRD LARRPGRAQWQRLRHWLSWLPLLMVNRDIFIRSLALQLVFFLLTVQGTRLGDTTVAAN ALLLNGLLLTSYALDGLAHAVEALCGHAIGARDRAALRRALVVAGGWSLLASLAFAAL FALFGHLFIDLQSDIAGVREVAYAYLPYLACLPLLGMWSYLLDGLFIGATRAREMRNA MLVAVAASLPLGWLLQGLGNHGLWLAFLAFMLLRGLVLAAYGWRLTRRDGWFPAQGAD SGR" misc_feature 5410912..5412183 /locus_tag="PA4821" /note="DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins; Region: MATE_DinF_like; cd13136" /db_xref="CDD:240541" gene complement(5412569..5414236) /locus_tag="PA4822" /db_xref="GeneID:880171" CDS complement(5412569..5414236) /locus_tag="PA4822" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253509.1" /db_xref="GeneID:880171" /translation="MLGTILLINLAGAVALLLWGTHMVSSGVLRGFGTVLRNWLGRHL GNRWLALLAGLGITGLLQSSTATSLMAASFTASGTLGLAPALAVMLGANVGTTLVVQL LSFDTSLLAPLALLSGLLLFRLGDGPRLESLGQCLIGLGLMLLALALLGHSLQQIEAS PAFVAVIHGLEGDPLIALLLAALLTWACHSSVAVVLLVASLAQAGLVSLPIALALVLG ANLGGALPALGVAGSRVARRLPLGNLLVRLLGCLLVLPWLTALAQPANALGGAAAVWF HSDFNLALALLAIGFTGTLAALLARLLPEEAQSDEPGMPRYLDEAGLEVANIGLANAT REVLRLADMASLMLRATSGLLQRPEAKVAAEIRRQDQALDQLSAAIRAYLADLGQDGL GDSDADRAQEILLFAINIEHIGDLVANSLLPLAMRWAGRSRAGSEFELGRMLPLQAVI EESLHLAISAFLREDLDAALRLVARKKLLQRLEADASRERFRRLRDDRGAWVESGDVF QRILRDYRRIHHHVTALAYPLLERSGIDPMAKRPDEPGQGEGSACAS" misc_feature complement(5412635..5414236) /locus_tag="PA4822" /note="Na+/phosphate symporter [Inorganic ion transport and metabolism]; Region: NptA; COG1283" /db_xref="CDD:440894" protein_bind 5413368..5413380 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(5414279..5414488) /locus_tag="PA4823" /db_xref="GeneID:880172" CDS complement(5414279..5414488) /locus_tag="PA4823" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253510.1" /db_xref="GeneID:880172" /translation="MNVVRKCLGASRRALCGLAARLLAKAAHLLMVVSVRAYASGRLS QVEVKYLLDCSSALNRASLRLAMGQ" gene complement(5414539..5415315) /locus_tag="PA4824" /db_xref="GeneID:880400" CDS complement(5414539..5415315) /locus_tag="PA4824" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253511.1" /db_xref="GeneID:880400" /translation="MTLHDRRPRAPLFQPLPAALRRALSWRLGFVAAALACVLLLALL SEARAAGGAYRVDDGEIDPVGECNLDAWHQRERHHGNRYQSVLSPACTFSALPSVQLG AALVREGDAGDRHSRLSPELKTPLLARDDLGLALAFALSADLYLDRRHAFEGAGFNLP LSYQPFEALRLNAGVGLGHAYAEGERRHRWNWGMGMEYRVGQPLTLIAERFGESAGDS GWQAGPRLHLGERLDLDLLVGGHLRGERERWLVSGATLRF" gene complement(5415413..5418124) /gene="mgtA" /locus_tag="PA4825" /db_xref="GeneID:880401" CDS complement(5415413..5418124) /gene="mgtA" /locus_tag="PA4825" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="Mg(2+) transport ATPase" /protein_id="NP_253512.1" /db_xref="GeneID:880401" /translation="MSVATQRNTQLDTERRNDRLSMRAAREAQNSLETTLTNVRGRQD GLDQAEAAARLHADGPNEVAHDRPPHVLVQLLQAFNNPFIYVLMTLSAISFFTDFWLP LQDGEETDLTGVIIVLCMVLVSGLMRFWQEYRSGKAAEALKAMVRNTATVLRRDERGM RGELREIPMGELVVGDIVRLSAGDMIPADIRLIESRDLFISQAVLTGEALPVEKYDTL GAVREKSAKRIAADQQDLLELPNICFMGTNVVSGTATAVVVATGARTYFGSLARSIVG SRAQTAFDRGVNSVSWLLIRFMLVMVPIVLLINGFTKGDWTEAFMFALAVAVGLTPEM LPMIVSANLAKGAVAMSRRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHVD VAGRRCDRVLQMAWLNSFHQSGMKNLMDRAVVAFVEQNPRITPSDAWRKVDELPFDFV RRRLSVILEGKDGEQLLVCKGAVEEMLEIATRVHQDGVDLPLDEERRRALLALAEQYN RDGFRVLLLGTRSLSRTESQAQYGASDERDLVIAGLLTFLDPPKETAGPAIAALRENG VAVKVLTGDNPVVSAKICREVGLDVGEPLLGRDIDLMDDATLQRLAEERTVFAKLTPL QKSRVLKALQGNGHTVGFLGDGINDAPALRDADVGISVDSGTDIAKESADIILLEKSL MVLEEGVIKGRETFGNIMKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLM YDISQLSLPWDKMDKEFLAKPRKWDSKNIGRFMVWIGPTSSIFDITTYALMWFVFAAN SPEMQSLFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVMLMTGLVMALGIYVP FSPLGAVVGLQPLPWEYFPWLVGTLLCYCVTAQTMKTLYIRRFGQWF" misc_feature complement(5415416..5418124) /gene="mgtA" /locus_tag="PA4825" /note="magnesium-transporting ATPase; Provisional; Region: PRK15122" /db_xref="CDD:237914" gene complement(5418351..5418569) /locus_tag="PA4826" /db_xref="GeneID:882168" CDS complement(5418351..5418569) /locus_tag="PA4826" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253513.1" /db_xref="GeneID:882168" /translation="MNFENSVSPGVSAFVAKMRVRAAQSPGAILPGHGHPASLAWRVD PAGGRLEYRRLETQVEENPESGRRPMRG" gene complement(5418899..5419738) /locus_tag="PA4827" /db_xref="GeneID:882169" CDS complement(5418899..5419738) /locus_tag="PA4827" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="arylamine N-acetyltransferase" /protein_id="NP_253514.1" /db_xref="GeneID:882169" /translation="MTPLTPEQTHAYLHHIGIDDPGPPSLANLDRLIDAHLRRVAFEN LDVLLDRPIEIDADKVFAKVVEGSRGGYCFELNSLFARLLLALGYELELLVARVRWGL PDDAPLTQQSHLMLRLYLAEGEFLVDVGFGSANPPRALPLPGDEADAGQVHCVRLVDP HAGLYESAVRGRSGWLPLYRFDLRPQLWIDYIPRNWYTSTHPHSVFRQGLKAAITEGD LRLTLADGLFGQRAGNGETLQRQLRDVEELLDILQTRFRLRLDPASEVPALARRLAGL ISA" misc_feature complement(5418956..5419666) /locus_tag="PA4827" /note="N-acetyltransferase; Region: Acetyltransf_2; pfam00797" /db_xref="CDD:395644" gene 5419863..5420318 /locus_tag="PA4828" /db_xref="GeneID:882253" CDS 5419863..5420318 /locus_tag="PA4828" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253515.1" /db_xref="GeneID:882253" /translation="MAQAIVAYLHYLSIFLLFALLVLQHRLLRLPLDLERARSLAAID RGYGLCALAVLASGLARVLWYGKGVDYYLHNGLFHAKVGLFVLAALVSLLPTVTFLGW RGALKAGEVPAVTPARGRRVVMAVRLQLLLLLVIPLLATLMARGFGMRG" misc_feature 5419863..5420306 /locus_tag="PA4828" /note="Uncharacterized membrane protein [Function unknown]; Region: COG3556" /db_xref="CDD:442777" gene complement(5420323..5421726) /gene="lpd3" /locus_tag="PA4829" /db_xref="GeneID:882254" CDS complement(5420323..5421726) /gene="lpd3" /locus_tag="PA4829" /EC_number="1.8.1.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="dihydrolipoamide dehydrogenase" /protein_id="NP_253516.1" /db_xref="GeneID:882254" /translation="MMESYDVIVIGAGPGGYNAAIRAGQLGLKVACVEGRETLGGTCL NVGCMPSKALLHASELYAAASGGEFARLGIRVSPELDLAQMMKQKDESVAALTRGVEF LFRKHKVQWIKGWARLQGEGRVGVALADGGHAQLEARDIVIATGSEPAPLPGVPVDNQ RILDSTGALELVEVPRHLVVIGAGVIGLELGSVWRRLGAQVTVLEYLERICPGLDGET ARTLQRALTRQGMRFRLGTRVVAARSGEQGVELDLQPAAGGATESLQADYVLVAIGRR PYTEGLGLETVGLASDRRGMLENQGQRSAAPGVWVIGDVTSGPMLAHKAEEEAIVCIE RIAGHAAEMNAEVIPSVIYTQPEVASVGLGEEQLQAARREYKVGRFPFSANSRAKINH ESEGFIKILSDARSDQVLGVHMIGPGVSEMIGEACVAMEFSASAEDLALTCHPHPTRS EALRQAAMDVHGRAMQN" misc_feature complement(5420338..5421723) /gene="lpd3" /locus_tag="PA4829" /note="Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Region: Lpd; COG1249" /db_xref="CDD:440861" gene 5421899..5422438 /locus_tag="PA4830" /db_xref="GeneID:882275" CDS 5421899..5422438 /locus_tag="PA4830" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253517.1" /db_xref="GeneID:882275" /translation="MEQPGREDRLNAWIATERAARARLGASGTLELAQVAALSPQEFF DRIGSGQLPCPPYGELVDFVPIEWSEGRFLFQGTPDRRHYNPLGSVHGGYAASLLDSC MGCAIHTRLQAGQGYTTTDLRISYLRALTDKVGPVRAEGRVVHLGRSTAVAEGRLYDV DDRLYAVGSTTCLVLHMAG" misc_feature 5422052..5422423 /locus_tag="PA4830" /note="Acyl-CoA thioesterase PaaI, contains HGG motif [Secondary metabolites biosynthesis, transport and catabolism]; Region: PaaI; COG2050" /db_xref="CDD:441653" gene 5422506..5423066 /locus_tag="PA4831" /db_xref="GeneID:882767" CDS 5422506..5423066 /locus_tag="PA4831" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253518.1" /db_xref="GeneID:882767" /translation="MRYPEDHKQKTRRRIVEEAARLFRQDGVGATGLQPLMKALGLTH GGFYAHFKSKDDLVETALRHAAAQLDEITAPLAEAERPLALLIEQYLSPRHRDNPGAG CPLPTLSAELGQRGTPSPTTDSIVRKRLAMIEAALEGEDAGERAVLLLASLVGALQLS RSVQDEALSQRILEATRKKLLEQMER" misc_feature 5422524..5422970 /locus_tag="PA4831" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene complement(5423071..5423868) /locus_tag="PA4832" /db_xref="GeneID:882768" CDS complement(5423071..5423868) /locus_tag="PA4832" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_253519.1" /db_xref="GeneID:882768" /translation="MNEQIGNGVALVTGASSGIGATYAEHLARRGHDLLLVARDRQRL EALADRLRQAHGVRVEILRADLSERDDRLRVERRLRDDASIALLVNNAGVAMNGPLAD ADMDRAERMIALNVVALTRLAAGAAEGFRRRGGGAIVNLGSVVALAPELFNAVYSATK AYVLSLSQSLQHELAGSGVYVQAVLPGVTRTEIWERSGTGIAGIPAEMVMEVEDLVEA ALVGFDRREAVTIPSLPDAADWQALMTARARLAPNLSRQRPAERYLG" misc_feature complement(5423107..5423850) /locus_tag="PA4832" /note="Short-chain dehydrogenase [General function prediction only]; Region: YqjQ; COG0300" /db_xref="CDD:440069" gene 5424099..5424716 /locus_tag="PA4833" /db_xref="GeneID:882769" CDS 5424099..5424716 /locus_tag="PA4833" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253520.1" /db_xref="GeneID:882769" /translation="MYHGERLNAWTHLIGAVAACTGAVWLTVQASLNGSPWKIVGVGV YGVTLTLLYSISTAYHSVRGRAKVVMRKLDHLSIYLLIAGSYTPFCLVTLRGPWGWTL FGIVWGLAVLGMLQEIKPRSEARVLSVVIYAVMGWIVLIAVKPLLAALGSAGFTWLAA GGVLYTVGIVFYAYDHRFRHWHGIWHLFVIAGSLLHFVAIWRYVL" misc_feature 5424099..5424713 /locus_tag="PA4833" /note="Predicted membrane channel-forming protein YqfA, hemolysin III family [Intracellular trafficking, secretion, and vesicular transport]; Region: YqfA; COG1272" /db_xref="CDD:440883" gene complement(5424761..5425615) /locus_tag="PA4834" /db_xref="GeneID:882351" CDS complement(5424761..5425615) /locus_tag="PA4834" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253521.1" /db_xref="GeneID:882351" /translation="MVLDLLKSGVLLAVLASFTFSVMNALVKEASATLPAAEIVFFRS AIGTLLIYLLMRQAGVALSRQGVPMLLVRGVMGALYLVCYFYAIAHIPLADASILAHM SPFFVILFSALFLGERIPRAVYWLLLVVVLGALMIVKPFSYSSYSVYAVVGLLSAVFA AGASVAIRQLSARHHTYEIVFYFLAVATLVAIPLMWNDFVVPATLREWGLLLAIGVVS LLGQVFLTRAFSHESATIVAVTRYIGIVFNAGWGWLFWSEVPDALTIAGGVLIVVACI ALSRTKKG" misc_feature complement(5424767..5425591) /locus_tag="PA4834" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" gene complement(5425597..5426898) /locus_tag="PA4835" /db_xref="GeneID:882352" CDS complement(5425597..5426898) /locus_tag="PA4835" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253522.1" /db_xref="GeneID:882352" /translation="MNAADESLGNVLLVGLGAVAIQVALDLRRHGAGRLGALNHPGRR SQRIAEALARGACLQLEGQGQHRWLSGNAALDVFHQDPAELRDDWQTLVLCVPADSYL DVVRGLPWERLGGVRTLLLVSAFIGANLLVRSALPAGCQATVLSLSSYYAATKVIDET QPLRALTKAVKRRVYLGSSRPDCPARETWRRVLAGSGVEVVPLATPEAAEGRNVTTYV HSPFFLGEFALARILSEQGPPGFMYKLYPEGPITPGAIGAMRRLWCELSELLRRMGAE PLNLLRFLNDDNYPVHETMLPRASIDGFAEAGAERQEYLLFVRYAALLVDPFSPADEQ GRHFDFSAVPFRRVSRDEDGLWRLPRVPLEDYRKLALIVALAAHFDLAMPQARSLLAS YENAVSRFIDCQGASQCHPSLYPIDSRPAADAIYRQWCSTC" misc_feature complement(5425600..5426877) /locus_tag="PA4835" /note="Uncharacterized conserved protein [Function unknown]; Region: COG4408" /db_xref="CDD:443530" gene complement(5426895..5427686) /locus_tag="PA4836" /db_xref="GeneID:878136" CDS complement(5426895..5427686) /locus_tag="PA4836" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253523.1" /db_xref="GeneID:878136" /translation="MQGRTPLLETLRELECEIRLLTVYARECCGCYEILRRKLDRLSG LIGEDCSRAQWQADSDDPALQALGLRLRDAAVQALCELEKHLCQGVLHEPGEMGRYLG SLLESIRGELDSAGIDADARVLFVGSGALPTSALVLAREVGAHLCCLDIDEEALGCAR EIARCQGLEARMQFSSLPPAELAFSRDATHFLIASLVQQKSAVLAQIRQVMRADAKVL LRHGSGIKGLFNYPVEPAELDGWRVCAERVSQPLYDTLILEKAGR" misc_feature complement(5426958..>5427323) /locus_tag="PA4836" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases; cl17173" /db_xref="CDD:473071" gene complement(5427716..5429842) /locus_tag="PA4837" /db_xref="GeneID:878137" CDS complement(5427716..5429842) /locus_tag="PA4837" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253524.1" /db_xref="GeneID:878137" /translation="MRVSVSLVLGVGLGCSSPALWAETESPAELEVLTVTAEAERAEG PVQGYRANRTASATRTDTRIEDIPQAISVVPRQVLDDLDSARIERALDFAGGVSRQNN FGGLTMFEYNVRGFTTSEFYRDGFSANRGYMNAPDSATIERVEILKGPASSLYGRGDP GGTVNLVTKKPQAERFARLHASAGSWDRYRSTLDLNTPLDEEGDLLYRMNLAVEDSKG FRDYADGQRLLVAPSISWQLDPDTSLLVEAEVVRNRQVFDRGTVAPHNHLGSLPRSRF FGEPDDGKIDNNNETLQATLRHHFNEQWSLRLASHYKHGHLDGYASENSSLAADGYSL RREYRYRDFEWHDSITQLDLLGDLHTGSIRHQLLMGLEYERYHNDELILRSIPSRNPY AIDIRRPVYGQPKPPFGRDDRNHEEVDAMALNLQDQIEFSEKWRGLLGVRFDRYRQDM NATRLNNGRFRETSSQQTQRAATPRIGVLYQATPEVGLFANASKSFKPNGGTDMAGKA FDPEEGRGYEAGVKLDLLDGRLGMTLAAFHLKKKNVLTADPSNPGYQQTAGEARSQGF DLQFSGQLTEQLRLIGAYAYIDAEVTKDENIARGSRLLNVPKHSGSLMGVYEFREGWL HGADAGAAVNYVGERAGDSSDSGFELPAYTTVDLLARYPLASNATLGVNVNNLFDRRY YERSYNNVWVAPGEPRNLTMSLTLNY" misc_feature complement(5427719..5429836) /locus_tag="PA4837" /note="Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]; Region: FhuE; COG4773" /db_xref="CDD:443805" gene 5429984..5431138 /locus_tag="PA4838" /db_xref="GeneID:879593" CDS 5429984..5431138 /locus_tag="PA4838" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253525.1" /db_xref="GeneID:879593" /translation="MPNSISNSSRLHSIDALRGLVMLFMLLDHVRETFFLHRQVGDPM DVASTEPALFLSRTLAHLCAPVFVFLTGLSAFLYGEKHQGRRAVSAFLFKRGLFLVAL ELTLVNFAWTFQLPPTVIYLQVIWAIGLSMLALAALLWLPRPLLAALGVLLVAGHNLL DPLHFAPGSAWHLPWAVLHDRGWIEAGDALRLRTSYPLLPWIGVIALGYAAGNWFSGA TPATTRRRYLLAGGGGLLLGFILLRLLNGYGEKPWAFGETPAITLMGFFNVTKYPPSL LFLALTLGIGLLLLAWFERLDWSGRGKALVAFGGAPMFFYLLHLYLLKLLYLLALAIW GANRGDYFGFSSVPALWLCSILLAVALYPAVHWFAGFKARRRDIAWLKYF" misc_feature 5430005..5431135 /locus_tag="PA4838" /note="Uncharacterized membrane protein, DUF1624 family [Function unknown]; Region: COG3503" /db_xref="CDD:442726" gene complement(5431381..5433291) /gene="speA" /locus_tag="PA4839" /db_xref="GeneID:879594" CDS complement(5431381..5433291) /gene="speA" /locus_tag="PA4839" /EC_number="4.1.1.19" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="arginine decarboxylase" /protein_id="NP_253526.1" /db_xref="GeneID:879594" /translation="MAARRTRKDDGSNWTVADSRGVYGIRHWGAGYFAINDGGNVEVR PQGADSTPIDLYELVGQLREAGLSLPLLVRFPDILQDRVRKLTGAFDANIERLEYQSR YTALYPIKVNQQEAVVENIIATENVSIGLEAGSKPELMAVLALAPKGGTIVCNGYKDR EFIKLALMGQKLGHNVFIVIEKESEVQLVIEEAANVGVQPQVGLRVRLSSLASSKWAD TGGEKAKFGLSAAQLLSVVERFRQAGLDQGVRLLHFHMGSQIANLADYQHGFKEAIRY YGELRALGLPVDHIDVGGGLGVDYDGTHSRNASSINYDIDDYAGVVVGMLKEFCDAQG LPHPHIFSESGRALTAHHAVLITQVTDVERHNDDVPKIVDLDEQPEIVRWLAELLGPT DAEMVTETYWRATHYIGDAAAQYADGKISLAQKALAEQCYFAICRRLHNQLKARQRSH RQVLDELNDKLADKYICNFSVFQSLPDTWAIGQVLPILPLHRLGEEPDRRAVLQDLTC DSDGKITQYVDEQSIETSLPVHEVKEGEDYLIGVFLVGAYQEILGDMHNLFGDTDSVN VYQRADGGIYHAGIETHDTIEDMLRYVHLSPEELMTLYRDKVAGAKLTARERNQYLDA LRLGLTRSAYLS" misc_feature complement(5431384..5433276) /gene="speA" /locus_tag="PA4839" /note="biosynthetic arginine decarboxylase; Region: PRK05354" /db_xref="CDD:235427" misc_feature complement(order(5431618..5431626,5431633..5431641, 5431759..5431761,5431765..5431773,5431777..5431779, 5431879..5431881,5431888..5431890,5431894..5431896, 5431900..5431902,5432203..5432214,5432611..5432622, 5432728..5432730,5432740..5432742,5432752..5432754, 5432812..5432814,5432878..5432883,5432887..5432892, 5432962..5432964,5433085..5433087)) /gene="speA" /locus_tag="PA4839" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143503" misc_feature complement(order(5431624..5431626,5431636..5431638, 5431648..5431650,5431765..5431770,5432254..5432265, 5432407..5432412,5432518..5432520,5432527..5432529, 5432677..5432679,5432827..5432829,5432896..5432898, 5432962..5432964,5432968..5432970)) /gene="speA" /locus_tag="PA4839" /note="active site" /db_xref="CDD:143503" misc_feature complement(order(5431648..5431650,5431768..5431770, 5432254..5432265,5432407..5432412,5432518..5432520, 5432527..5432529,5432677..5432679,5432827..5432829, 5432896..5432898,5432962..5432964,5432968..5432970)) /gene="speA" /locus_tag="PA4839" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143503" misc_feature complement(order(5431768..5431770,5432962..5432964)) /gene="speA" /locus_tag="PA4839" /note="catalytic residues [active]" /db_xref="CDD:143503" misc_feature complement(order(5431624..5431626,5431636..5431638, 5431648..5431650,5431765..5431770,5432254..5432256, 5432518..5432520)) /gene="speA" /locus_tag="PA4839" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:143503" gene complement(5433541..5433912) /locus_tag="PA4840" /db_xref="GeneID:879519" CDS complement(5433541..5433912) /locus_tag="PA4840" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="translation initiation factor Sui1" /protein_id="NP_253527.1" /db_xref="GeneID:879519" /translation="MVKKASSLSALGGLVYSTDGGRHCPDCQQPKDACICGQAVAPVG DGIARVRRETKGRGGKTVTTISGLSLAGDALKELASALKRRCGTGGSLKDGVVEIQGE HVELLIDELLKRGFKAKKSGG" misc_feature complement(5433544..5433897) /locus_tag="PA4840" /note="translation initiation factor Sui1; Validated; Region: PRK06824" /db_xref="CDD:168689" misc_feature complement(order(5433604..5433606,5433613..5433615, 5433640..5433642,5433646..5433654,5433658..5433666, 5433673..5433675,5433727..5433729,5433733..5433738, 5433748..5433750)) /locus_tag="PA4840" /note="putative rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:211319" gene complement(5434116..5434652) /locus_tag="PA4841" /db_xref="GeneID:879630" CDS complement(5434116..5434652) /locus_tag="PA4841" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253528.1" /db_xref="GeneID:879630" /translation="MAAPISAEEVAHRAASDAELIAWVDEQDRPLGSLPRAELRERGL IGRGTFILLFNSAGELCVQRRTLSKAVYPGYWDLAAGGMVQAGEPYADSAARELEEEL GIRDAVLREHGRFFFDEPGNRLWCAVFSAVSDAPLRLQAEEISEARFIRPELALEEAR SLPYCPDSLQALRLYLDA" misc_feature complement(5434122..5434592) /locus_tag="PA4841" /note="uncharacterized NUDIX hydrolase subfamily; Region: NUDIX_Hydrolase; cd04697" /db_xref="CDD:467578" gene complement(5434656..5435726) /locus_tag="PA4842" /db_xref="GeneID:879631" CDS complement(5434656..5435726) /locus_tag="PA4842" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253529.1" /db_xref="GeneID:879631" /translation="MLDWKKRRGTMRDRVDNSVDDVRTYFGGPWLVRVVGGLLGIYLL VAMLVGWYWSQEPDLFPVQQDAQAAAERAGRQMVTGYTTVETLKEVVDTLLTKPGGYI SNDIFPPGIWMDNMPSWEYGVLVQVRDISRALRKDFARSQSQSTEDADLARAEPRFNF DNKSWALPASESEYQEGIKSLDRYLARLSDPNQPNAQFYARADNLNNWLGDVATRLGS LSQRLSASVGRVKLNTNIKNPEEVQPGEAPKVEEVVQETPWLQIDNVFYEARGQAWAL SHLLRAIEVDFADVLAKKNATVSVRQIIRELEAAQEPLWSPMVLNGSGYGILANHSLV MANYISRANAAVIDLRQLLSQG" misc_feature complement(5434662..5435726) /locus_tag="PA4842" /note="Uncharacterized conserved protein, DUF2333 domain [Function unknown]; Region: COG5345" /db_xref="CDD:444128" protein_bind complement(5436003..5436015) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="EMSA [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4842" /bound_moiety="AmrZ" protein_bind complement(5436016..5436028) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="EMSA [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4842" /bound_moiety="AmrZ" protein_bind 5436022..5436034 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="EMSA [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4842" /bound_moiety="AmrZ" gene 5436079..5437707 /locus_tag="PA4843" /db_xref="GeneID:879632" CDS 5436079..5437707 /locus_tag="PA4843" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_253530.1" /db_xref="GeneID:879632" /translation="MMTEHDDPTLDRLKHHFAQRVINQARQVLEVWQRLTRAEWNSDG MEELADATLRLQRYAERFEQAEHAQLAGAIDRTLDVVEANRGRLSSESISELNQLMQR LSRTGLRHGDQLEHTVLPPLRKPVYLALKDRERAERLAQQLEFFGLQALSCETADAFR ASMRERYPAAIVMEVDFAGPDMGLRLASEAQAGLEHKLPVLFFSDSETDTPTRLAAAR AGGQEFFTGTLDASSVLEKIETLSRLSFYEPYRVLIVDDSRAQALHTEMVLNSAGIIT RALTEPLSVMAELSDFQPDLIILDMYMPECLGTELAKVIRQHERHVSVPIIYLSAEDD LDKQLDAMSEGGDDFLTKPIRPRHLIATVRTRASRARSLKARMVRDSLTGLYNHTHTL QLLEDARLRARRDGRPLSFAMLDIDHFKQVNDRFGHPMGDRVIKGLALFLKQRLRKTD HIGRYGGEEFAVVLPDTDLDAARLVLDEIRQRFAEIHYPAQPTDLRCTFSCGIAELTP DLDIKSMAKQADEALYRAKHGGRNRIEVYRPDAR" misc_feature 5436823..5437659 /locus_tag="PA4843" /note="Two-component response regulator, PleD family, consists of two REC domains and a diguanylate cyclase (GGDEF) domain [Signal transduction mechanisms, Transcription]; Region: PleD; COG3706" /db_xref="CDD:442920" misc_feature 5437213..5437680 /locus_tag="PA4843" /note="Diguanylate-cyclase (DGC) or GGDEF domain; Region: GGDEF; cd01949" /db_xref="CDD:143635" misc_feature order(5437321..5437323,5437450..5437452) /locus_tag="PA4843" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143635" misc_feature order(5437336..5437338,5437345..5437350,5437360..5437362, 5437372..5437374,5437438..5437440,5437444..5437455) /locus_tag="PA4843" /note="active site" /db_xref="CDD:143635" misc_feature order(5437426..5437428,5437510..5437512) /locus_tag="PA4843" /note="I-site [active]" /db_xref="CDD:143635" protein_bind complement(5437705..5437717) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4844" /bound_moiety="AmrZ" protein_bind 5437711..5437723 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4844" /bound_moiety="AmrZ" gene 5437785..5439758 /locus_tag="PA4844" /db_xref="GeneID:879569" CDS 5437785..5439758 /locus_tag="PA4844" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_253531.1" /db_xref="GeneID:879569" /translation="MRLKQLTNLNTLLLLTVCLALGITLWWSQRAMERPFQLLDQYLE LSQRFDEQVARNIRQYLGSGDAVRQQAALQALESLAEALPELPPDLARTLAPSLAELR EFSAGDLLAAGKLAGDPQGLLLQAERDLTGNLEQWSAYLDAAAGQPQAGAYRTPLLLA SLHLTRLSLARAKLVESANPALAGDVERELANLREQAGRIEALPLLGVLDEQRSASDD FAAMMGLAGDAEAGAGNAEDRGVALRRELASLLQRYPDELRRTRDLIERRQQLSADTG ARLDAVRQALATLEPQVRGERQRLQGQVRLIQGGMIALILLIALAIDSLQRRLARVLG QLVPALSAWADGDFSRPISLRTRTEDLRNLEDSLNRLRSFLAELVGAIHRRAEQVAGS SQTLAEVSSGLHAGVERQAGDTGQIRDALGDMEAAIQQVAGDASQTADASRSAGQAVE HGQRVIGESLGGLRELVDEVQGNAQSIERLAEESATIGSVLTVIRSIAEQTNLLALNA AIEAARAGDQGRGFAVVAEEVRSLAQRTAGATEEIQQLIGRLQQAARQSVEAMRSQVE HAERTAEQAGAAEGALDEVVAAIHTIGVMAERIAEGSTQQSQAVGEIRSHSERIHALG GENLRLIGHSREQGEQLRQLGGDLRTTVQAFRL" misc_feature 5438166..5439755 /locus_tag="PA4844" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene 5439918..5441693 /gene="dipZ" /locus_tag="PA4845" /db_xref="GeneID:879570" CDS 5439918..5441693 /gene="dipZ" /locus_tag="PA4845" /EC_number="1.8.1.8" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="thiol:disulfide interchange protein" /protein_id="NP_253532.1" /db_xref="GeneID:879570" /translation="MRRLLTLILLLVALPAGAGLFDSRPGASLGGGLDGGGFLKVDQA FKPSVERSDAQHVLLRFVNAEGYYLYRHRFQFKVEPAQVSLGQVQLPAGKQHHDEYFG DTEVYYNIVDLEIPLNNPARQPYTLVVTYQGCADKGLCYPPETRRFDIDGGAATPAAS DAAGKGPLEHKGKRSLLFFFLAGLTLTFTPCVLPMLPILSGVVLRGRPGGGRGFVLSL AYVLPMALCFALLGALMGMFGASLNLQAQLQSPWVLVPFAAFFALFAVAMFGFFELRL PGFIREPLDRLAGDARGGSILGAATLGVLSSLLVSPCVSAPLAASLLYISASGDAWGG GLQLFALGLGMGTPLVVFGAGGGALLPKSGAWMNGVRNAFGVLLLAVAVWLLERVVSG PVALMLWGMLAGGAGLALGALEFTPKSAARRLLQLLGLMFLTYAVAAWIGALQGESDP IHPLGRSVPSIHAGPPSTPGEWQNLTTPAQLDAALAEARQAGKPVLLDWYADWCISCK VIERQVLTDPTVQARLPAYRLLRFDITESNPAQRGLLDRYNLFGPPAILFFAPGGDEW SDLRVIGEIDAAGLAERLRRAATRQ" misc_feature 5440035..5441681 /gene="dipZ" /locus_tag="PA4845" /note="thiol:disulfide interchange protein precursor; Provisional; Region: dipZ; PRK00293" /db_xref="CDD:234717" gene 5441837..5442280 /gene="aroQ1" /locus_tag="PA4846" /db_xref="GeneID:878093" CDS 5441837..5442280 /gene="aroQ1" /locus_tag="PA4846" /EC_number="4.2.1.10" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-dehydroquinate dehydratase" /protein_id="NP_253533.1" /db_xref="GeneID:878093" /translation="MATLLVLHGPNLNLLGTREPGTYGSTTLGQINQDLERRAREAGH HLLHLQSNAEYELIDRIHAARDEGVDFIIINPAAFTHTSVALRDALLAVSIPFIEVHL SNVHKREPFRHHSYFSDVAVGVICGLGATGYRLALESALEQLQRP" misc_feature 5441837..5442277 /gene="aroQ1" /locus_tag="PA4846" /note="type II 3-dehydroquinate dehydratase; Region: PRK05395" /db_xref="CDD:235443" misc_feature order(5441867..5441869,5441873..5441875,5441990..5442004, 5442011..5442013,5442020..5442022,5442068..5442070, 5442089..5442091,5442098..5442103,5442110..5442112, 5442170..5442172) /gene="aroQ1" /locus_tag="PA4846" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:238262" misc_feature order(5441888..5441890,5441903..5441905,5442059..5442061, 5442065..5442070,5442077..5442079,5442098..5442100, 5442137..5442145,5442170..5442172) /gene="aroQ1" /locus_tag="PA4846" /note="active site" /db_xref="CDD:238262" misc_feature order(5442146..5442148,5442152..5442157,5442188..5442193, 5442197..5442208,5442212..5442220,5442227..5442229, 5442239..5442241,5442251..5442253,5442260..5442262) /gene="aroQ1" /locus_tag="PA4846" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238262" gene 5442304..5442774 /gene="accB" /locus_tag="PA4847" /db_xref="GeneID:879557" CDS 5442304..5442774 /gene="accB" /locus_tag="PA4847" /EC_number="6.4.1.2" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase biotin carboxyl carrier protein subunit" /protein_id="NP_253534.1" /db_xref="GeneID:879557" /translation="MDIRKVKKLIELLEESGIDELEIREGEESVRISRHSKTAAQPVY AQAPAFAAPVAAPAPAAAAPAAAAAESAPAAPKLNGNVVRSPMVGTFYRAASPTSANF VEVGQSVKKGDILCIVEAMKMMNHIEAEVSGTIESILVENGQPVEFDQPLFTIV" misc_feature 5442328..5442768 /gene="accB" /locus_tag="PA4847" /note="Biotin carboxyl carrier protein [Lipid transport and metabolism]; Region: AccB; COG0511" /db_xref="CDD:440277" gene 5442792..5444141 /gene="accC" /locus_tag="PA4848" /db_xref="GeneID:879558" CDS 5442792..5444141 /gene="accC" /locus_tag="PA4848" /EC_number="6.4.1.2" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase biotin carboxylase subunit" /protein_id="NP_253535.1" /db_xref="GeneID:879558" /translation="MLEKVLIANRGEIALRILRACKELGIKTVAVHSTADRELMHLSL ADESVCIGPAPATQSYLQIPAIIAAAEVTGATAIHPGYGFLAENADFAEQIERSGFTF VGPTAEVIRLMGDKVSAKDAMKRAGVPTVPGSDGPLPEDEETALAIAREVGYPVIIKA AGGGGGRGMRVVYDESELIKSAKLTRTEAGAAFGNPMVYLEKFLTNPRHVEVQVLSDG QGNAIHLGDRDCSLQRRHQKVIEEAPAPGIDEKARQEVFARCVQACIEIGYRGAGTFE FLYENGRFYFIEMNTRVQVEHPVSEMVTGVDIVKEMLRIASGEKLSIRQEDVVIRGHA LECRINAEDPKTFMPSPGKVKHFHAPGGNGVRVDSHLYSGYSVPPNYDSLVGKVITYG ADRDEALARMRNALDELIVDGIKTNTELHKDLVRDAAFCKGGVNIHYLEKKLGMDKH" misc_feature 5442792..5444135 /gene="accC" /locus_tag="PA4848" /note="acetyl-CoA carboxylase biotin carboxylase subunit; Validated; Region: PRK08591" /db_xref="CDD:236307" gene 5444252..5445118 /locus_tag="PA4849" /db_xref="GeneID:878324" CDS 5444252..5445118 /locus_tag="PA4849" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253536.1" /db_xref="GeneID:878324" /translation="MERIRRWYRQSLAAATEAATCFALGFRESLQPAALFRSASLCIL VSVLCTWLFVHFFEPIIRLCGWAALYTAFSVANFALIPSGSLIEAGSGGPYFDPLAAF NGLAGLAQLAFYFVGYAALFFVALYAASIVFGIRLGLRIGLLGQLKEQVRQRYPRLAP ASGERISLWRAAGFRLAPWLGVSGSILVGLLVPLYNGVLLLLALAYLNIRFLLPATLA GLADAGEQLAVLRARRGSLLLFGLLILLLALVPLLNLLLPAVLGGGTCHLANRGLAQL RGEATAESGSAG" gene 5445199..5446083 /gene="prmA" /locus_tag="PA4850" /db_xref="GeneID:878325" CDS 5445199..5446083 /gene="prmA" /locus_tag="PA4850" /EC_number="2.1.1.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L11 methyltransferase" /protein_id="NP_253537.1" /db_xref="GeneID:878325" /translation="MPWLQVRLAITPEQAETYEDALLEVGAVSVTFMDAEDQPIFEPD LGTTPLWSRTHLLALFEADTDETALLAHLALLTGGDLPEHHVEEIADQDWERSWMDNF QPMRFGRRLWIVPSWHAAPEPDAVNLLLDPGLAFGTGTHPTTALCLEWLDGQELAGRQ VLDFGCGSGILAIAALLLGAERAVGTDIDPQALEASRDNASRNGIEPARFPVYLPADL PQRQADVLVANILAGPLVSLAPQLTGLVRPGGLLALSGILAEQAEEVRAAYSAHFDLD PTAEREGWIRISGRRRAD" misc_feature 5445202..5446071 /gene="prmA" /locus_tag="PA4850" /note="Ribosomal protein L11 methyltransferase (PrmA); Region: PrmA; pfam06325" /db_xref="CDD:428888" misc_feature order(5445688..5445708,5445757..5445762,5445829..5445834, 5445883..5445885) /gene="prmA" /locus_tag="PA4850" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 5446179..5447444 /locus_tag="PA4851" /db_xref="GeneID:878658" CDS 5446179..5447444 /locus_tag="PA4851" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253538.1" /db_xref="GeneID:878658" /translation="MSESVITQCPHCSTSFRVNDAQLGAANGAVRCGTCLKVFNALQH QVGGAPRANAPSAAEAKPVAAPPPAPSVAAAPPAARPRDETLWIHDDLDLDSLNLDEE LAKLDEFELNQEFSSIEKAPRPAESLLARRDDERDPHDERWAEALIADAEPAQPARGN PRQEPSLGEPLAEERVSFVPLRRAEDPPELRLSLDDDDDDEPSLGKRRHGLSALDEDD EESAEEQSVAPLGSARKPDEAPVESLDQLRDEPLQLAWEKPRRQWPRRLGWLLLILLA LGGLAAQYIAYHFDELARQDAYRPWFAQLCPEIGCTLPSKVDVEQIRSSNLVVRSHPE FSGALVVDAIIYNRASFSQPFPLLELRFADLNGHLIANRRFKPGEYLGGELAGRTEMP PQVPIHVSLDILDPGPKAVNYSLSFHSPE" misc_feature 5446191..5446304 /locus_tag="PA4851" /note="MJ0042 family finger-like domain; Region: MJ0042_CXXC; TIGR02098" /db_xref="CDD:131153" misc_feature 5447025..5447429 /locus_tag="PA4851" /note="Protein of unknown function (DUF3426); Region: DUF3426; pfam11906" /db_xref="CDD:432179" gene 5447648..5448646 /locus_tag="PA4852" /db_xref="GeneID:878659" CDS 5447648..5448646 /locus_tag="PA4852" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253539.1" /db_xref="GeneID:878659" /translation="MSVVRIGPYTLPNRLILAPMAGVTDRPFRQLCRRLGAGMVVSEM VTSDVRLWNSRKSRLRLIHDGEDEPRSVQIAGGDPAMLAEAAQRNVELGAQIIDINMG CPAKKVCNKAAGSALLRDEALVAEILDAVVRAVDVPVTLKIRTGWDRDNRNGVTVAKL AEQAGIQALAVHGRTRADLYTGEAEYETIAAIKQAVSIPVFANGDIDSPEKARKVIEQ TGVDALLIGRAAQGRPWIFREIDHYLRTGEHLPAAPLPEVQSILLEHLAELHLFYGEE MGVRIARKHVGWYLATLPGAREFRAQFNRLQDTDAQCASVRQFFAERQNNGTGVAA" misc_feature 5447666..5448598 /locus_tag="PA4852" /note="tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]; Region: DusA; COG0042" /db_xref="CDD:439812" gene 5448643..5448966 /gene="fis" /locus_tag="PA4853" /db_xref="GeneID:880045" CDS 5448643..5448966 /gene="fis" /locus_tag="PA4853" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="Fis family transcriptional regulator" /protein_id="NP_253540.1" /db_xref="GeneID:880045" /translation="MTTMTTETLVSGTTPVSDNANLKQHLTTPTQEGQTLRDSVEKAL HNYFAHLEGQPVTDVYNMVLCEVEAPLLETVMNHVKGNQTKASELLGLNRGTLRKKLK QYDLL" misc_feature 5448646..5448963 /gene="fis" /locus_tag="PA4853" /note="DNA-binding transcriptional regulator Fis; Region: fis; PRK00430" /db_xref="CDD:179020" gene 5449046..5450653 /gene="purH" /locus_tag="PA4854" /db_xref="GeneID:880046" CDS 5449046..5450653 /gene="purH" /locus_tag="PA4854" /EC_number="2.1.2.3" /EC_number="3.5.4.10" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase" /protein_id="NP_253541.1" /db_xref="GeneID:880046" /translation="MTDQTTRLPIRRALISVSDKTGVVDFARELVALGVEILSTGGTY KLLRDNGISAVEVADYTGFPEMMDGRVKTLHPKVHGGILGRRDLDGAVMEQHGIKPID LVAVNLYPFEATVARPDCDLPTAIENIDIGGPTMVRSAAKNHKDVAIVVNAGDYAAVI ESLKAGGLTYAQRFDLALKAFEHTSAYDGMIANYLGTIDQTRDTLGTADRGAFPRTFN SQFVKAQEMRYGENPHQSAAFYVEAKKGEASVSTAIQLQGKELSFNNVADTDAALECV KSFLKPACVIVKHANPCGVAVVPEDEGGIRKAYDLAYATDSESAFGGIIAFNRELDGE TAKAIVERQFVEVIIAPKISAAAREVVAAKANVRLLECGEWPAERAPGWDFKRVNGGL LVQSRDIGMIKAEDLKIVTRRAPTEQEIHDLIFAWKVAKFVKSNAIVYARNRQTVGVG AGQMSRVNSARIAAIKAEHAGLEVKGAVMASDAFFPFRDGIDNAAKAGITAVIQPGGS MRDNEVIAAADEADIAMVFTGMRHFRH" misc_feature 5449064..5450650 /gene="purH" /locus_tag="PA4854" /note="bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional; Region: purH; PRK00881" /db_xref="CDD:234854" gene 5450757..5452046 /gene="purD" /locus_tag="PA4855" /db_xref="GeneID:878236" CDS 5450757..5452046 /gene="purD" /locus_tag="PA4855" /EC_number="6.3.4.13" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphoribosylamine--glycine ligase" /protein_id="NP_253542.1" /db_xref="GeneID:878236" /translation="MNVLIIGSGGREHALAWKVAQDPRVAKVFVAPGNAGTATEAKCE NVAIDVLALEQLADFAAKNVQLTIVGPEAPLVAGVVDLFRERGLDIFGPTAGAAQLEG SKAFTKDFLARHRIPTAAYRNFTEVEPALAYLHEQGAPIVIKADGLAAGKGVIVAMNL DEAEAAVRDMLAGNAFGDAGSRVVIEEFLDGEEASFIVMVDGQNVLPMATSQDHKRVG DGDSGPNTGGMGAYSPAPVVTAEVHQRVLDEVIYPTVRGMAEEGNVYTGFLYAGLMID KSGAPKVIEFNCRFGDPETQPIMVRLESSLVLLVEAALAKALDKVEATWDPRPTVGVV LAAGGYPGDYAKGEVIEGLAEAAALDGKVFHAGTALKDGQVVTSGGRVLCATAIGESV SAAQQQAYRLAEKIRWNGCFYRKDIGYRAIARERGES" misc_feature 5450757..5452028 /gene="purD" /locus_tag="PA4855" /note="Phosphoribosylamine-glycine ligase [Nucleotide transport and metabolism]; Region: PurD; COG0151" /db_xref="CDD:439921" gene 5452150..5454978 /gene="retS" /locus_tag="PA4856" /db_xref="GeneID:877881" CDS 5452150..5454978 /gene="retS" /locus_tag="PA4856" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="sensor histidine kinase MifS" /protein_id="NP_253543.1" /db_xref="GeneID:877881" /translation="MVRLRIAIGLLVSFLLLLLGPMSPAVADDAGVSSVPLQTTATTP SANQNWRLLRDESAQLRIADVLQRKEQFRPLAKRSFIFPASPQAVWLQVQLPAQKVPS WLWIFAPRVQYLDYYLVQDGQLVRDQHTGESRPFQERPLPSRSYLFSLPVDGKPMTLY VRMTSNHPLMAWFDQIDEAGLVGLEKPAYAFGMLLGGMLLLLMYNLIRFAYSRSASSL WLAAVHAALAVCAAANLGLVAFWLPGLKFNQSLTADLGALGAAVSLLWFACSFFRGTA ESRLNRLLQGEALLILAVGAIIAFTQQLWFSWLIYLLVILSSLSVPLIAAWHWYRGYQ PARLIVAGMIVFNAGFMVFLPVLFGTKQLDPGWLVLGVFSFATLAGLVLSVSLTERQR LIQQLNLQQRTSEAAHTAELQTKAEFLAKISHEIRTPMNGVLGMTELLLGTPLSAKQR DYVQTIHSAGNELLTLINEILDISKLESGQIELDEVQFDLNALIEDCLDIFRVKAEQQ RIELISFTQPQVPRVIGGDPTRLRQVVLSLLDNAFKQTEEGEILLVVALDDQGETPRL RIAVQDSGHPFDAKEREALLTAELHSGDFLSASKLGSHLGLIIARQLVRLMGGEFGIQ SGSSQGTTLSLTLPLDPQQLENPTADLDGPLQGARLLVVDDNETCRKVLVQQCSGWGL NVSAVSSGKEALAQLRTKAHLREYFDVVLLDQDMPGMTGMQLAAKIKEDPNLNHDILL IMLTGISNAPSKIIARNAGIKRILAKPVAGYTLKATLADELAQRGVSGVTNYLQPAKE AQAPSLPSDFRILVAEDNSISTKVIRGMLNKLNLQPDTASNGQEALSAMKATQYDLVL MDCEMPVLDGFSATEQLRAWEAHEQRPHTPVVALTAHILSEHKERARLVGMDGHMAKP VELSQLRELIAYWVGERDRRRQGDALPS" misc_feature 5452297..5452665 /gene="retS" /locus_tag="PA4856" /note="7TMR-DISM extracellular 2; Region: 7TMR-DISMED2; pfam07696" /db_xref="CDD:429601" misc_feature 5452759..5453319 /gene="retS" /locus_tag="PA4856" /note="7TM diverse intracellular signalling; Region: 7TMR-DISM_7TM; pfam07695" /db_xref="CDD:429600" misc_feature <5453353..5454930 /gene="retS" /locus_tag="PA4856" /note="hybrid sensory histidine kinase BarA; Provisional; Region: PRK11107" /db_xref="CDD:236848" gene 5455434..5456027 /locus_tag="PA4857" /db_xref="GeneID:877882" CDS 5455434..5456027 /locus_tag="PA4857" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253544.1" /db_xref="GeneID:877882" /translation="MHLLFSVYLKMLVLYSPFFVLSCFISLSRGFGPRDRKRMAWRVA LAALIASVALYLFGRYIFILFGITADAFRIGAGSVLFISALGMAQGRAAVQSDNVQQD VTIVPLTIPLTVGPGTIGALLVMGVGQGWEAKLISLVAIFLACLTLGTTLYLSDRIER LLGDQGLQIVSRLMGLFVCALAAQIIVTGLKGSLFPG" misc_feature 5455434..5456015 /locus_tag="PA4857" /note="Small neutral amino acid transporter SnatA, MarC family [Amino acid transport and metabolism]; Region: MarC; COG2095" /db_xref="CDD:441698" gene 5456452..5457717 /locus_tag="PA4858" /db_xref="GeneID:877883" CDS 5456452..5457717 /locus_tag="PA4858" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253545.1" /db_xref="GeneID:877883" /translation="MKRRSLLKAFTLSAFIASMGLSWSIQAAETIKVGILHSLSGTMA ISETSLKDMALMTIDEINAKGGVNGRKLEAVVVDPASNWPLFAEKARQLLTQDKVAVV FGCWTSVSRKSVLPVFEELNGLLFYPVQYEGEELSPNVFYTGAAPNQQAIPAVEYLMS EDGGGARRFFLLGTDYVYPRTTNKILRAFLHSKGVDDKDIQEVYTPFGHSDYQTIVAD IKKFAAGGKTAVVSTVNGDSNVPFYKELANQGLEATEVPVVAFSVGEEELRGIDTKPL VGNLAAWNYFESVSNPVNEKFVADWKAYAKAKNLPNYGTAVTNDPMEATYVGIHMWAQ AVEKAGSTEVDKVREAMAGQSFKAPSGYTLVMDKSNHHLHKPVMIGEIQDDGQFEVVW KTPEPLRAQPWSPFIPGNEKKPEHALKSN" misc_feature 5456542..5457663 /locus_tag="PA4858" /note="urea ABC transporter, urea binding protein; Region: urea_ABC_UrtA; TIGR03407" /db_xref="CDD:132448" misc_feature order(5456767..5456769,5456830..5456832,5456839..5456844, 5456977..5456979) /locus_tag="PA4858" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:380578" gene 5457864..5459453 /locus_tag="PA4859" /db_xref="GeneID:880868" CDS 5457864..5459453 /locus_tag="PA4859" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_253546.2" /db_xref="GeneID:880868" /translation="MPLALLTRPLHACVLVLAALLAVTAYAGPAQDFAAADNGGRAHL LEHWAATPDADRLAFLEALRHNRIALDSRQQPFILGADQRFQAAEGDALPDGEPKPLR LNNRLRGLLNTALASHQLVANEVPLRQAAAQQLQKTAKAAQRPLLEARLRIESDAGVK EALGLALANLQLGDPDPALRLSAVRLLGESGDPLARTRLENLLDPAVEPEEGVRIAAA TSLAQVKRRLLVGDLLGQAFSGLSLGSILLLAALGLAITYGLLGVINMAHGEMLMLGA YSTYVVQLLFQRLAPEWLALYPLLALPVAFCVSAAIGMALERTVIRHLYGRPLETLLA TWGISLVLIQLVRMLFGAQNVEVANPAWLSGGIQVLPNLVLPWNRIVIIGFALFVLLL TWLLLNRTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGLGSGIAGLGGVALSQVGN VGPDLGQGYIIDSFLVVVLGGVGQLAGSVLAAFGLGVANKILEPQIGAVLGKILILAL IVLFIQKRPQGLFALKGRVID" misc_feature 5458242..5458565 /locus_tag="PA4859" /note="HEAT repeat [General function prediction only]; Region: HEAT; COG1413" /db_xref="CDD:441023" misc_feature 5458629..5459441 /locus_tag="PA4859" /note="urea ABC transporter, permease protein UrtB; Region: urea_trans_UrtB; TIGR03409" /db_xref="CDD:200272" misc_feature 5459103..5459159 /locus_tag="PA4859" /note="TM-ABC transporter signature motif [active]" /db_xref="CDD:119324" protein_bind complement(5458771..5458783) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 5459450..5460529 /locus_tag="PA4860" /db_xref="GeneID:880869" CDS 5459450..5460529 /locus_tag="PA4860" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_253547.1" /db_xref="GeneID:880869" /translation="MNQPLTVTLARRAGGRVTAIALGAAFATLLVMPLLHLLPADSAL HLSAYSLTLTGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQASG DSLPAFMTFLSWNELPWYWAGTQHFLWALCLVVLVPGALAFAFGYFAFRSRIRGVYFS IMTQALTFAGMLLFFRNETGFGGNNGFTDFRSILGFPITAPGTRAALFLATVALLAAS LLLGWRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFVWTLSAVLCGLAGALFVPQ VGIINPSEMSPTNSIEAAVWVALGGRGTLLGPLLGAGVVNGAKSWFTVAFPEYWLFFL GALFIVVTLYLPRGLLGLLRKEKEQ" misc_feature 5459576..5460475 /locus_tag="PA4860" /note="urea ABC transporter, permease protein UrtC; Region: urea_trans_UrtC; TIGR03408" /db_xref="CDD:132449" misc_feature 5460173..5460229 /locus_tag="PA4860" /note="TM-ABC transporter signature motif [active]" /db_xref="CDD:119323" gene 5460526..5461383 /locus_tag="PA4861" /db_xref="GeneID:877937" CDS 5460526..5461383 /locus_tag="PA4861" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_253548.1" /db_xref="GeneID:877937" /translation="MRTTPHLMLEPAFHPGLDTAGSGRDAIGLGAATSGRLDARHGTI LSLEDINVSFDGFKALRDLTLYIGVGELRCIIGPNGAGKTTLMDVITGKTRPQSGTAY FGDTLDLTRMSEVQIAQAGIGRKFQKPTVFEALSVFENLELAQRADKSVWASLRARLD GTQRERIEEVLATIRLLESRQRPAGLLSHGQKQFLEIGMLLVQEPQLLLLDEPVAGMT DAETEFTAELFKSLARKHSLMVVEHDMGFVGSIADHVTVLHQGHVLAEGSLAEVQADE QVIEVYLGR" misc_feature 5460631..5461380 /locus_tag="PA4861" /note="ABC-type uncharacterized transport system, ATPase component [General function prediction only]; Region: COG4674" /db_xref="CDD:443710" gene 5461520..5462218 /locus_tag="PA4862" /db_xref="GeneID:877938" CDS 5461520..5462218 /locus_tag="PA4862" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_253549.1" /db_xref="GeneID:877938" /translation="MLQVDKLHQYYGGSHILRGLSFEAKVGEVTCLLGRNGVGKTTLL RCLMGLVPAREGQVAWEGRSLTGLRPHQRVRAGIAYVPQGREIFPRLTVEENLLMGLS RFSARDARAVPDFIYELFPVLREMKQRRGGDLSGGQQQQLAIGRALASQPRLLILDEP TEGIQPSVIKEIGAVVRSLAARGDMAILLVEQFYDFAAELADQYLVMARGEIVQQGRG RDMESEGVRGLVAI" misc_feature 5461523..5462215 /locus_tag="PA4862" /note="urea ABC transporter, ATP-binding protein UrtE; Region: urea_trans_UrtE; TIGR03410" /db_xref="CDD:274567" gene 5462302..5462754 /locus_tag="PA4863" /db_xref="GeneID:879775" CDS 5462302..5462754 /locus_tag="PA4863" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253550.1" /db_xref="GeneID:879775" /translation="MTVTLRPAVQADAGFAALCVAAAYAPWIAVIGRKPWPMTQDYHE VIASDRVLIAEHDGQPVGLLVTRETADGFLVDNLAVLPECKGQGIGRQLLERAERDAT SLGYRSLYLYTNERMTENIALYARVGYLEYERRQEEGFRRVFMRKALA" misc_feature <5462419..5462748 /locus_tag="PA4863" /note="Predicted N-acetyltransferase YhbS [General function prediction only]; Region: yhbS; COG3153" /db_xref="CDD:442387" gene 5462763..5463605 /gene="ureD" /locus_tag="PA4864" /db_xref="GeneID:879776" CDS 5462763..5463605 /gene="ureD" /locus_tag="PA4864" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="urease accessory protein" /protein_id="NP_253551.1" /db_xref="GeneID:879776" /translation="MTAALPDLSFHPAWHAQLELAYARAGDATRPVTRRHAGPLRVQK HLYAEGPEVCQHILVHPPGGIAGGDSLAFDVRLGERAWAQLTSPGAAKWYRAACPARQ TLEIHLEPGATLEWLPQESIVFAGAQAELETRIQLRGDARLFYWDMVALGRPASGERF ASGHFVAALDIRRDDRLLWHERQRIDGGDRLLDSPIGLAGHPVLATLVASGEIDTDLL QRCRALPCAGRGNLSQLPGGLLVARCLADEALHARAWLIELWRLLRPALLGREAVPPR IWST" misc_feature 5462763..5463602 /gene="ureD" /locus_tag="PA4864" /note="Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones]; Region: UreH; COG0829" /db_xref="CDD:440591" gene 5463607..5463909 /gene="ureA" /locus_tag="PA4865" /db_xref="GeneID:882210" CDS 5463607..5463909 /gene="ureA" /locus_tag="PA4865" /EC_number="3.5.1.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="urease subunit gamma" /protein_id="NP_253552.1" /db_xref="GeneID:882210" /translation="MDLSPREKDKLLIFTAGLLAERRLARGLKLNYPEAVALISAALL EGARDGRSVAELMHYGTTLLNREQVMEGVPEMIPDIQVEATFPDGTKLVTVHQPIA" misc_feature 5463607..5463903 /gene="ureA" /locus_tag="PA4865" /note="urease subunit gamma; Provisional; Region: ureA; PRK13241" /db_xref="CDD:183913" misc_feature order(5463631..5463636,5463661..5463663,5463673..5463675, 5463697..5463705,5463724..5463726,5463817..5463819, 5463832..5463834,5463847..5463849,5463853..5463855) /gene="ureA" /locus_tag="PA4865" /note="alpha-gamma subunit interface [polypeptide binding]; other site" /db_xref="CDD:238229" misc_feature 5463817..5463819 /gene="ureA" /locus_tag="PA4865" /note="beta-gamma subunit interface [polypeptide binding]; other site" /db_xref="CDD:238229" gene 5463918..5464436 /locus_tag="PA4866" /db_xref="GeneID:882184" CDS 5463918..5464436 /locus_tag="PA4866" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253553.1" /db_xref="GeneID:882184" /translation="MSASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAW FDTRARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQ LLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTF MQLNLDPTRSAP" misc_feature 5463930..5464412 /locus_tag="PA4866" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" gene 5464453..5464758 /gene="ureB" /locus_tag="PA4867" /db_xref="GeneID:882185" CDS 5464453..5464758 /gene="ureB" /locus_tag="PA4867" /EC_number="3.5.1.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="urease subunit beta" /protein_id="NP_253554.1" /db_xref="GeneID:882185" /translation="MIPGEYDIQPGDIELNAGRRTLALSVANTGDRPIQVGSHYHFFE VNDALAFDRPATRGMRLNIAAGTAVRFEPGQSREVELVEIGGGRRVYGFAGRVMGDL" misc_feature 5464462..5464755 /gene="ureB" /locus_tag="PA4867" /note="Urease beta subunit [Amino acid transport and metabolism]; Region: UreB; COG0832" /db_xref="CDD:440594" gene 5464821..5466521 /gene="ureC" /locus_tag="PA4868" /db_xref="GeneID:878240" CDS 5464821..5466521 /gene="ureC" /locus_tag="PA4868" /EC_number="3.5.1.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="urease subunit alpha" /protein_id="NP_253555.1" /db_xref="GeneID:878240" /translation="MKISRQAYADMFGPTVGDRVRLADTDLWIEVERDFTVYGEEVKF GGGKVIRDGMGQSQLGAAQVVDTVITNALILDHWGVVKADVGLKDGRIQAIGKAGNPD IQPGVNIAIGAGTEVIAGEGMILTAGGIDTHIHFICPQQIEEALMSGVTTMIGGGTGP AAGTNATTCTSGPWHMARMLQAADAFPMNIGFTGKGNASLPLPLEEQVLAGAIGLKLH EDWGSTPAAIDNCLEVAERHDIQVAIHTDTLNESGFVETTLGAFKGRTIHTYHTEGAG GGHAPDIIKACGFANVLPSSTNPTRPFTRNTIDEHLDMLMVCHHLDPAIAEDVAFAES RIRRETIAAEDILHDLGAFSMISSDSQAMGRVGEVITRTWQTADKMKRQRGRLDGDGA RNDNFRARRYIAKYTINPAITHGISHEVGSVEAGKWADLVLWRPAFFGVKPSLILKGG AIAASLMGDINGSIPTPQPVHYRPMFASYAGSRHATSLTFVSQAAFAAGVPQQLGLRK AIGVVSGCRGVQKTDLIHNGYLPTIEVDAQNYQVRADGQLLWCEPADVLPMAQRYFLF " misc_feature 5464821..5466518 /gene="ureC" /locus_tag="PA4868" /note="urease subunit alpha; Reviewed; Region: ureC; PRK13207" /db_xref="CDD:237305" gene 5466790..5468007 /locus_tag="PA4869" /db_xref="GeneID:878241" CDS 5466790..5468007 /locus_tag="PA4869" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253556.1" /db_xref="GeneID:878241" /translation="MLRQAILARFPADYEVEIKGADLLGFGEKFLVAYGNRRFVGKAF AMDDQVIERLERNQGRTNLPLVKVFYIAEPGLLSSLLNLSPFLDIQKNMVELSLREYR KIQLVPFDPDAKRKPREQFETDYAFPQLFSLSQLEVADYDGDGRDELRLGYLSYAGGS GGTRWSVIYDLKDGALTAHSGYPEMLDIDVARFIQAVNLYAGLDGTLPRDQRQLEDVV GRGSERFALTAAERQALVADPPQRDDYARVLMSLSPRSPYAPDRFIDLGDGSRLTLAP RHTDDYSTFLDIGGKKIFVEAFYVDDDACHWCEHRWRVMAFHYDDGRWISDRTINGDS FNGQWLRNAEPLGLNDVFGTYRDQGPTGLAWSFIDPRWTASSQHDMDDPLGVGMRTLS PVEQWVKERYREN" gene complement(5468017..5468283) /locus_tag="PA4870" /db_xref="GeneID:878248" CDS complement(5468017..5468283) /locus_tag="PA4870" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253557.1" /db_xref="GeneID:878248" /translation="MASGWANDGAVQEQIDSTIEDAIARARSQLPRGESLTHCEECDA TIPEARRRAIPGVRLCVNCQTEHDREQAKFSGYNRRGSKDSQLR" misc_feature complement(5468020..5468283) /locus_tag="PA4870" /note="DksA/TraR family C4-type zinc finger protein; Region: PRK11019" /db_xref="CDD:182903" gene 5468409..5469023 /locus_tag="PA4871" /db_xref="GeneID:878249" CDS 5468409..5469023 /locus_tag="PA4871" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253558.1" /db_xref="GeneID:878249" /translation="MMGPFRRLAHLIDQGRQLDAALAGDPFALPAPEDRYSVRQLHGL YPRRHPGLYAPLLGSLALLLGAAPLGLAALRLALPEAPLRPLGWLSALPLLAAWLWLI ALLSRGASLGPRLARDASLLLVGTGLLLRLASGETSGLVALGGGACAWLLFNSRAMQR YMELVYAQRLYRAQSANRPGSAQRRLANQAAYRERKRRERSGRS" gene complement(5469115..5469978) /locus_tag="PA4872" /db_xref="GeneID:878100" CDS complement(5469115..5469978) /locus_tag="PA4872" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253559.1" /db_xref="GeneID:878100" /translation="MHRASHHELRAMFRALLDSSRCYHTASVFDPMSARIAADLGFEC GILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRT VVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIART NAELIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLHIPLMLVTYGNPQLR DDARLARLGVRVVVNGHAAYFAAIKATYDCLREERGAVASDLTASELSKKYTFPEEYQ AWARDYMEVKE" misc_feature complement(5469121..5469957) /locus_tag="PA4872" /note="2-Methylisocitrate lyase and related enzymes, PEP mutase family [Carbohydrate transport and metabolism]; Region: PrpB; COG2513" /db_xref="CDD:442003" gene 5470186..5471451 /locus_tag="PA4873" /db_xref="GeneID:878101" CDS 5470186..5471451 /locus_tag="PA4873" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="heat-shock protein" /protein_id="NP_253560.1" /db_xref="GeneID:878101" /translation="MNPSTAARALGIDFGTSNSTVGWWRPEVEPLIELEDGKITLPSV VFFNVEERRPVYGRQALGEYLEGYEGRLMRSLKSLLGSKLLKSETTVLGSALPFKDLL GLFIGQLKARGEAAAGQAFDAVVLGRPVFFVDDDPEADREAQDTLVQVANKLGFKEVS FQYEPIAAAFDYERCIQREELVLIVDIGGGTSDFSLVRLAPERRNLAERQDDILATGG VHIGGTDFDKQLSLEGVMPLFGYGSRMKSDAFMPTSYHLNLATWHTINAVYAQKSQLA LKNMRYDIVDSTGIDRLFRLIEERAGHWLAMQVEDSKIRLTETERLHLSLERIEAGLG VELTRGLFENAVDGLLERVRNSVAQLLASAGVDPDRVDTVFFTGGSSGIPALRRSVSA MLPNARHVEGNLFGSIGSGLAIEAKKRYG" misc_feature 5470213..5471424 /locus_tag="PA4873" /note="nucleotide-binding domain (NBD) of Escherichia coli chaperone protein YegD and similar proteins; Region: ASKHA_NBD_HSP70_YegD-like; cd10231" /db_xref="CDD:466829" gene complement(5471626..5472042) /locus_tag="PA4874" /db_xref="GeneID:879705" CDS complement(5471626..5472042) /locus_tag="PA4874" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253561.1" /db_xref="GeneID:879705" /translation="MNILRIPMFVLAMAVSAHGFAATAQQEKMTACNAEATTKALKGD ERKAFMSGCLKAGAPAGGKATAQQEKMKSCNADASAKSLKGDERKAFMSSCLKAGGSA KAATQQEKMKTCNADATAKALKGDERKAFMSTCLKK" misc_feature complement(5471752..5472018) /locus_tag="PA4874" /note="phosphate starvation-inducible protein PsiF; Region: PRK11505" /db_xref="CDD:183165" misc_feature complement(5471629..>5471850) /locus_tag="PA4874" /note="phosphate starvation-inducible protein PsiF; Region: PRK11505" /db_xref="CDD:183165" gene 5472197..5472735 /locus_tag="PA4875" /pseudogene="unknown" /db_xref="GeneID:879706" gene 5472824..5473168 /gene="osmE" /locus_tag="PA4876" /db_xref="GeneID:879707" CDS 5472824..5473168 /gene="osmE" /locus_tag="PA4876" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="OsmE family transcriptional regulator" /protein_id="NP_253563.1" /db_xref="GeneID:879707" /translation="MYKQSLAALFVMATLAGCASTKVQNPVNYITFRNEPLVKDVEKG MSQQEVLRIGGTPSGTQKRLMKPGSCNSYILNKDGQQQPFYVSFDGSGKVDGSGFLSC SELDRHERDARP" misc_feature 5472824..5473162 /gene="osmE" /locus_tag="PA4876" /note="osmotically-inducible lipoprotein OsmE; Region: PRK11251" /db_xref="CDD:183058" gene complement(5473212..5473619) /locus_tag="PA4877" /db_xref="GeneID:882233" CDS complement(5473212..5473619) /locus_tag="PA4877" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253564.1" /db_xref="GeneID:882233" /translation="MPRGDKSKYSDKQQRKAEHIEESYKAKGVSESEAEARAWATVNK QSGGGERKGGSGRAKSETAKRADRKDSAHRAAQARSGRPANRGSASRGKRQGSTSVSE MTREELMQLARKRDIRGRSTMRKAELIEALSRA" misc_feature complement(5473215..5473316) /locus_tag="PA4877" /note="Rho termination factor, N-terminal domain; Region: Rho_N; cl06505" /db_xref="CDD:447016" protein_bind 5473709..5473736 /experiment="Beta-gal reporter assay [PMID: 24612375]" /experiment="ChIP-PCR [PMID: 24612375]" /experiment="EMSA [PMID: 24612375]" /experiment="Site directed mutagenesis [PMID: 24612375]" /note="Transcription factor binding site for NP_253565.; Evidence of regulation for: PA4878" /bound_moiety="BrlR" gene 5473766..5474578 /locus_tag="PA4878" /db_xref="GeneID:882234" CDS 5473766..5474578 /locus_tag="PA4878" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253565.1" /db_xref="GeneID:882234" /translation="MLTIGQLARIFEISTKTLRHYDAIGLFVPARTGSDNGYRYYQPE QIEQLSRILALRRLDVPLEAIDRLKRDGALDDPQRLRHFLQRHQHTLREEISARQRLL AELDRTLATLAHWRIRNMHARIVERPAFSVVGMEYFGSAPGDTIGQLWERFIPREHEI AGKHDPEVSYGICAQQPNGEFHYVAGFEVQEGWPVPEGMVRFQVPAQKYAVFTHKGTA PQIAESFQAIYSHLLAERGLEPKAGVDFEYYDQRFRGPLDPNSQVDLYIPIY" misc_feature 5473769..5474101 /locus_tag="PA4878" /note="Helix-Turn-Helix DNA binding domain of the BmrR transcription regulator; Region: HTH_BmrR; cd01107" /db_xref="CDD:133382" misc_feature order(5473772..5473780,5473820..5473822,5473874..5473882) /locus_tag="PA4878" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133382" misc_feature 5473883..5473885 /locus_tag="PA4878" /note="drug binding residues [chemical binding]; other site" /db_xref="CDD:133382" misc_feature order(5473916..5473918,5473925..5473927,5473937..5473942, 5473967..5473969,5474015..5474017,5474027..5474029, 5474045..5474047,5474057..5474059,5474066..5474071) /locus_tag="PA4878" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133382" misc_feature 5474123..5474572 /locus_tag="PA4878" /note="Predicted transcriptional regulator YdeE, contains AraC-type DNA-binding domain [Transcription]; Region: YdeE; COG3708" /db_xref="CDD:442922" gene complement(5474580..5476649) /locus_tag="PA4879" /db_xref="GeneID:882910" CDS complement(5474580..5476649) /locus_tag="PA4879" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253566.1" /db_xref="GeneID:882910" /translation="MTRGRKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSA ALNRPFAINGNLAVAWRREEGEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFAS LERIEFRLAPLPLLWQTIRIPQIKLTQPRAELLRLADGRANWDFDLPASDSDEPSAWQ LDIREIGFDKGSVSLDDQRLKTRLEVLVDPLGKPVPFGQLAGKALATGDAANAQDYVF GWKVKGTYKGQALAGSGKVGGMLALQDASKPFPLQAEVSAGSTRAAVVGTLTDPLNLG ALDLRLKLSGTSMANLYPLTGITLPDTPAYSTDGHLLARLKEEGGALFRYENFNGKVG ASDLHGSLTFVARQPRPKLSGKLTSEQLRFADLGPLIGADSNAEKQKRGQTSRQPGDK VLPVEEFRTERWRDMDADVEFTGKRIVHSDQLPISDLYTHLVLNDGLLRLEPLRFGVA GGKLESDIRLDGGKQPMQSRVKMSARGFKLKQLFPGFAPMQTSFGELNGDASLSGSGN SVAKILGGADGELKMLINDGAISKGLTEIAGLNVGNYLVTKLFGDDEVKINCAAADFG LQKGLMTSRLFVFDTENALVNVDGTVNFANEKLDLDVTPHSKGLRIFSLRSPLYVRGT FAKPDAGVHAGPLVARGAGMIALGVTVGPAASLLALVAPSKSDDNQCTALLQRMRLPA KVPAGKR" misc_feature complement(5474919..5476649) /locus_tag="PA4879" /note="AsmA family; Region: AsmA; pfam05170" /db_xref="CDD:428346" gene 5476945..5477478 /locus_tag="PA4880" /db_xref="GeneID:882911" CDS 5476945..5477478 /locus_tag="PA4880" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="bacterioferritin" /protein_id="NP_253567.1" /db_xref="GeneID:882911" /translation="MTTVQLTDVQTLRDRARKNIQEGAVTEGYSADRQTVLRLLNEAL ATELVCFLRYKRHYFMATGLKASIAAAEFLEHANQEMQHADQLAERIMQLGGEPDFNP RGLEERSHAEYVEGKTLKDMVTENLIAERIAIDSYREIITYLGNDDPTTRRIFEEILA QEEEHADDMADILDDLA" misc_feature 5477038..5477472 /locus_tag="PA4880" /note="Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]; Region: Bfr; COG2193" /db_xref="CDD:441796" protein_bind 5477649..5477672 /experiment="Beta-gal reporter assay [PMID: 19846594]" /experiment="DNA-array expression analysis [PMID: 19846594]" /experiment="EMSA [PMID: 19846594]" /experiment="qRT-PCR [RNA] [PMID: 19846594]" /experiment="Site directed mutagenesis [PMID: 19846594]" /note="Transcription factor binding site for NP_251182.; Evidence of regulation for: PA4881" /bound_moiety="MexT" protein_bind 5477688..5477700 /experiment="DNA-array expression analysis [PMID: 23382903]" /experiment="EMSA [PMID: 23382903]" /experiment="qRT-PCR [RNA] [PMID: 23382903]" /note="Transcription factor binding site for NP_250896.; Evidence of regulation for: PA4881" /bound_moiety="PA2206" gene 5477754..5478095 /locus_tag="PA4881" /db_xref="GeneID:882511" CDS 5477754..5478095 /locus_tag="PA4881" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253568.1" /db_xref="GeneID:882511" /translation="MKASLILGLALATLTANAAFAADGSSRTIDRLHKDMSSVELRIA DNGSEQTIDRLHKDMTKAEARLADNGSEQTVDRLHKDMTKAEARLADNGSEQTVDRLH RSMSRFDLRTA" gene complement(5478209..5478976) /locus_tag="PA4882" /db_xref="GeneID:882512" CDS complement(5478209..5478976) /locus_tag="PA4882" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253569.1" /db_xref="GeneID:882512" /translation="MKGPEKKRAKIAIDPSSERQMVDLQRRLLLRGGLSLGALAMLSG CRLQDGDSVDKVLWAMSRWNDRVQAWLFSRTRLAPTFDPSQVASPFPFNAFYPAYNVP EIDLPEYRLQVSGRVRDKRPWSLEQLRRLPQASQVTQLICIEGWSAIGQWSGVPLRTF LELVGADTSAKYVGFKCADRYYSSLDMPSALHPQTLLALEMSGQALPEENGYPLRLRI PTKLGFKNAKHVVEIFVSNSNPGGYWEDQGYNWFSGV" misc_feature complement(5478218..5478748) /locus_tag="PA4882" /note="bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains. This domain is found in a variety of oxidoreductases. Common features of all known members of this family, like sulfite oxidase and nitrite reductase, are that they...; Region: bact_SO_family_Moco; cd02108" /db_xref="CDD:239026" misc_feature complement(order(5478290..5478295,5478299..5478301, 5478308..5478310,5478332..5478334,5478347..5478349, 5478434..5478436,5478551..5478553,5478680..5478682, 5478686..5478688,5478692..5478694)) /locus_tag="PA4882" /note="Moco binding site [active]" /db_xref="CDD:239026" misc_feature complement(5478551..5478553) /locus_tag="PA4882" /note="metal coordination site [ion binding]; other site" /db_xref="CDD:239026" gene complement(5478973..5479587) /locus_tag="PA4883" /db_xref="GeneID:879597" CDS complement(5478973..5479587) /locus_tag="PA4883" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253570.1" /db_xref="GeneID:879597" /translation="MNRALHAWPVRLCHWLNAYAMACLIGSGWGIYNASPLLDFRFPA WATLGGWLGGSIAWHLAAMWLLLGNGLCYLAYGLSSGHFRRDFLPLSAAGVWRDLRLA LGLRLVHEPGRYNAVQRLLYWLVLALGALLVLSGLAIWKPVQLHGLTALFGGFQGARW VHFLAMAGVVGFVVVHLLLVLLVPRTLLPMLIGREWRRGRRSEG" misc_feature complement(5479084..5479575) /locus_tag="PA4883" /note="Thiosulfate reductase cytochrome b subunit [Inorganic ion transport and metabolism]; Region: YdhU; COG4117" /db_xref="CDD:443293" gene complement(5479641..5480264) /locus_tag="PA4884" /db_xref="GeneID:879598" CDS complement(5479641..5480264) /locus_tag="PA4884" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253571.1" /db_xref="GeneID:879598" /translation="MLRLKASPALLFGLLLASAASFAAQPPAGMLQPLRGTIQQAADD HLQLKARNGQQLTVRLTDKTAIRAVSLAKPEDIQPDSFIGTAAVPQPDGTLKALEVHV FAPSLRGSGEGHRPWENADGSASTMTNGTVGNLVVSQGRRMTVKYGDGEKTVVVPDDV PIVSLEPGERSLLKPGAKVVLFPQKGADGSLTALAISVGKDGVTPPM" gene 5480402..5481091 /gene="irlR" /locus_tag="PA4885" /db_xref="GeneID:877996" CDS 5480402..5481091 /gene="irlR" /locus_tag="PA4885" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_253572.1" /db_xref="GeneID:877996" /translation="MRILVIEDDTKTGEYLKKGLGESGYAVDWSQHGADGLYLALENR YDLVVLDVMLPGLDGWQIMEVLRKKHDVPVLFLTARDQLQDRIRGLELGADDYLVKPF SFTELLLRIRTLLRRGVVREAEQVQLADLQLDVLRRKVSRQGQVIALTNKEFALLHLL MRREGEVLSRTLIASEVWDMNFDSDTNVVDVAIKRLRAKVDNPFPNKLIHTVRGIGYV CEERPCPPAAP" misc_feature 5480408..5481055 /gene="irlR" /locus_tag="PA4885" /note="heavy metal response regulator; Region: cztR_silR_copR; TIGR01387" /db_xref="CDD:130454" gene 5481070..5482461 /locus_tag="PA4886" /db_xref="GeneID:877997" CDS 5481070..5482461 /locus_tag="PA4886" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_253573.1" /db_xref="GeneID:877997" /translation="MPARRSLTLYAALLFAAVAALVVSAVGFYLYRSVEEAMLRRSDV MVAGRVEHFRNLLRDNLTLAELKARPRLFENMLGNEQDILLLGQPGEAPIVAVNPRHE RLPSLRVVAAGQALNPSVVHAALTHDGIPMRVLAAEVLVGGREPLQITAAHLLLGETR MLAQYRDRVIAAVLLAFLGTALLGWLVLRHGLRPLRTLAAKAAEIHPTSLDTRLDVAA APAELQQVAQSFNAMLERLDDGYQRLQQFSADLAHEIRTPIGSLMGHGQVALRQPRSN EEYQALIASNQEELERIARMVESILFLARADDVRAAVERSRLDLGEELRRQAEYFEGL AEERGLSLDVQVSGQLRADPQLFRRALSNLLANAIRYASADSLIEVRGLRRSGEFLLS VENACDRLPAEPLSRLFDRFYRGDAARSDAQSSGLGLAIVQAIMRLHGGRAEASAPAP GRIRFDLAFPAQD" misc_feature 5481079..5482449 /locus_tag="PA4886" /note="heavy metal sensor kinase; Region: cztS_silS_copS; TIGR01386" /db_xref="CDD:273593" gene complement(5482452..5483768) /locus_tag="PA4887" /db_xref="GeneID:882278" CDS complement(5482452..5483768) /locus_tag="PA4887" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_253574.1" /db_xref="GeneID:882278" /translation="MFSPLVTFPALYTATLLMLAGSGLFTTYIGLRLTQEGAGDLWVG GLMASYYFGLVCGGKFGHKLIASFGHIRSYVACAGIATVTVLLHALVDQLEVWLLLRF ITGAVMMNQYMVIESWLNEQAESHQRGKVFAGYMVAVDLGLVLGQGLLALSPTLDYKP LLLVAICFASCLIPLAMTRRVHPAKLVAAPLEVRFFWQRVPQALGTIFIAGLMVGAFY GLAPVYANRNGLDASQSSFFVGMCIVAGFCAQWPLGWLSDRLDRSWLIRGNAVLLCLA SIPMWGLVTLPYWLLLANGFVTGMLLFTLYPLAVALANDHVEQPRRVALSAMLLTTYG VGACIGPLVAGALMRHFGPGLFYMLVSGYAVLLVFWVQPKRVTGEHRVDEAPLQHVAM PDTVSPMAATLDPRVEEVPEELVVEAPANIGRSDGEPDAGEKPAQS" misc_feature complement(5482656..5483738) /locus_tag="PA4887" /note="YcaD and similar transporters of the Major Facilitator Superfamily; Region: MFS_YcaD_like; cd17477" /db_xref="CDD:341030" misc_feature complement(order(5482758..5482760,5482767..5482772, 5482779..5482784,5482791..5482793,5482839..5482841, 5482851..5482853,5482863..5482868,5483019..5483021, 5483031..5483033,5483103..5483105,5483112..5483120, 5483127..5483132,5483139..5483141,5483340..5483342, 5483349..5483354,5483361..5483363,5483421..5483423, 5483430..5483438,5483442..5483447,5483595..5483597, 5483691..5483693,5483700..5483705,5483712..5483717)) /locus_tag="PA4887" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341030" gene complement(5483988..5485100) /gene="desB" /locus_tag="PA4888" /db_xref="GeneID:882279" CDS complement(5483988..5485100) /gene="desB" /locus_tag="PA4888" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="acyl-CoA desaturase" /protein_id="NP_253575.1" /db_xref="GeneID:882279" /translation="MNRPASPAMRDDRELTPEQLAAFGAELDALRLRTLADLGADDAR YIRRVRAAVRVCCWSGRALLMFGWLPPTWLLGSLLLGLGKILENMELGHNVMHGQYDW MNDPEFAGRAYEWDIAGPSDFWRHTHNHIHHTYTNVLGKDDDVGYGVVRLFPEQRWKP FYRWQPLWVTLQALLFQYAVAIQHLRLDKYAKGRLDKAELMPLLRRLRAKLGRQWTKD YLLFPLLGLFAGGFGAVFVGNLLANVLRNLWTFTVIFCGHFTEKAVVFPPSVLEGETR GHWYLRQLRGSSNLEGGPLFHILTGNLSHQIEHHLYPDLPARRYAALSREVREIARRY GQTYNSGRLGRQFLTVLRRIWVYRLPPREPLPAGRG" misc_feature complement(5484015..5485076) /gene="desB" /locus_tag="PA4888" /note="Fatty acid desaturase [Lipid transport and metabolism]; Region: DesA; COG3239" /db_xref="CDD:442471" gene complement(5485097..5486197) /locus_tag="PA4889" /db_xref="GeneID:882264" CDS complement(5485097..5486197) /locus_tag="PA4889" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_253576.1" /db_xref="GeneID:882264" /translation="MALLPLALLTPLLAPLRRLAARGWLREADVDGLLRHAHPLASLN RHYARVEARYWVADDMLALALRTAPGWPPVRPGQHIQLLAERDGVRVGRSYSLTRVVG ERLEIAVKRHPDGLLSPWLCEHLAVGQRVELQPAQGDLRWPMQAEAVCLLAAGSGLTP LLGLLREALENGYRGPVLWLHYVRHPGQRAWLGELEALAARHPNLELRWSLTRGARAD GCLEGHFQPRHLDGWAADLARSQALACGPAAFVEAVGEQLGARFAGLQTESFSVPRWR SGEAPREVRLRFARSQREVSGDSAASLLEQAEAHGLRPAHGCRQGICASCTCVLLSGC VRDLRSGALCSEPGQPIRLCVSAAHGDLALDL" misc_feature complement(5485388..5486113) /locus_tag="PA4889" /note="Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron...; Region: FNR_iron_sulfur_binding_2; cd06216" /db_xref="CDD:99812" misc_feature complement(order(5485388..5485390,5485394..5485396, 5485721..5485723,5485730..5485732,5485844..5485852, 5485862..5485864,5485868..5485876,5485910..5485921, 5485961..5485963)) /locus_tag="PA4889" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99812" misc_feature complement(order(5485910..5485915,5485919..5485921)) /locus_tag="PA4889" /note="FAD binding motif [chemical binding]; other site" /db_xref="CDD:99812" misc_feature complement(order(5485784..5485786,5485790..5485792, 5485814..5485816,5485835..5485837,5485844..5485846, 5485853..5485855)) /locus_tag="PA4889" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99812" misc_feature complement(order(5485718..5485720,5485724..5485735, 5485745..5485747)) /locus_tag="PA4889" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99812" misc_feature complement(order(5485457..5485462,5485646..5485654, 5485727..5485732)) /locus_tag="PA4889" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99812" misc_feature complement(5485100..5485345) /locus_tag="PA4889" /note="Ferredoxin [Energy production and conversion]; Region: Fdx; COG0633" /db_xref="CDD:440398" protein_bind 5486211..5486226 /experiment="DNAse footprinting [PMID: 17877713]" /experiment="EMSA [PMID: 17877713]" /note="Transcription factor binding site for NP_253577." /bound_moiety="DesT" protein_bind complement(5486253..5486270) /experiment="DNAse footprinting [PMID: 17877713]" /experiment="EMSA [PMID: 17877713]" /experiment="qPCR [quantitative real-time] [PMID: 17877713]" /note="'Transcription factor binding site for NP_253577.; Evidence of regulation for: PA4889, PA4888'" /bound_moiety="DesT" gene 5486356..5486985 /gene="desT" /locus_tag="PA4890" /db_xref="GeneID:882265" CDS 5486356..5486985 /gene="desT" /locus_tag="PA4890" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253577.1" /db_xref="GeneID:882265" /translation="MSSPRAEQKQQTRHALMSAARHLMESGRGFGSLSLREVTRAAGI VPAGFYRHFSDMDQLGLALVAEVDETFRATLRAVRRNEFELGGLIDASVRIFLDAVGA NRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADL VVKTVFATLPELIDPPAADLPPHLMPAAKITHQLRFIMIGGKHWHGLPG" misc_feature 5486356..5486982 /gene="desT" /locus_tag="PA4890" /note="HTH-type transcriptional repressor FabR; Region: PRK11202" /db_xref="CDD:236881" gene 5487215..5487718 /gene="ureE" /locus_tag="PA4891" /db_xref="GeneID:882294" CDS 5487215..5487718 /gene="ureE" /locus_tag="PA4891" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="urease accessory protein UreE" /protein_id="NP_253578.1" /db_xref="GeneID:882294" /translation="MLVIHQRLPARSPRWDEELHLTYEARSKSRLRCFAASGEEVGLF LERGQPPLADGDCLEARDGRLVRVVARSERLLHVTCASPLELTRAAYHLGNRHVALQV GDGWLRLLDDYVLKAMLEQLGATVEAIEAPFQPEHGAYGGGHHHSHHGEAEFNYAPRL HQFGVRR" misc_feature 5487215..5487622 /gene="ureE" /locus_tag="PA4891" /note="urease accessory protein UreE; Provisional; Region: ureE; PRK13261" /db_xref="CDD:237322" gene 5487715..5488386 /gene="ureF" /locus_tag="PA4892" /db_xref="GeneID:882295" CDS 5487715..5488386 /gene="ureF" /locus_tag="PA4892" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="urease accessory protein UreF" /protein_id="NP_253579.1" /db_xref="GeneID:882295" /translation="MNSIWARLRLASSQLPIGGYSYSQGLEAALDNGWVRDAESARTW LVDQLQLNLARFEAPLLAGLLRAALIGDWAACDAASERHRASRETRELAQESRQMGFS LHQLLEALPELDAPGRAWLARQDPPNLAAAWAMAARAWRLDAEEALSAWFWSWLENQL AVLMKTLPLGQLAAQKLASSLLPELDRACAEALRRPAVEGSAAFGLALASMTHETQYS RLFRS" misc_feature 5487715..5488383 /gene="ureF" /locus_tag="PA4892" /note="Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]; Region: UreF; COG0830" /db_xref="CDD:440592" gene 5488397..5489011 /gene="ureG" /locus_tag="PA4893" /db_xref="GeneID:878632" CDS 5488397..5489011 /gene="ureG" /locus_tag="PA4893" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="urease accessory protein UreG" /protein_id="NP_253580.1" /db_xref="GeneID:878632" /translation="MTSQPLRVGIGGPVGSGKTALTLALCRELRERYNLAVVTNDIYT QEDAEFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFPGLELILVE SGGDNLSATFSPELSDLTLYVIDVSAGDKIPRKGGPGICKSDLLVINKIDLAPLVGAS LDVMDRDARRMRGDKPFVFSNQKTGQGLDEIIAFIERQGLLTAA" misc_feature 5488412..5488984 /gene="ureG" /locus_tag="PA4893" /note="urease accessory protein UreG; Region: UreG; cd05540" /db_xref="CDD:349776" misc_feature order(5488433..5488456,5488517..5488519,5488700..5488702, 5488841..5488846,5488850..5488852,5488937..5488945) /gene="ureG" /locus_tag="PA4893" /note="active site" /db_xref="CDD:349776" misc_feature order(5488433..5488441,5488523..5488528,5488535..5488537, 5488544..5488546,5488601..5488612,5488622..5488624, 5488706..5488723,5488775..5488780,5488787..5488789, 5488796..5488801,5488844..5488846,5488853..5488855, 5488862..5488867,5488943..5488945) /gene="ureG" /locus_tag="PA4893" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:349776" misc_feature order(5488523..5488528,5488592..5488606,5488613..5488618, 5488625..5488630,5488634..5488639,5488643..5488648, 5488655..5488657,5488727..5488729,5488733..5488741, 5488796..5488804,5488820..5488822,5488907..5488909) /gene="ureG" /locus_tag="PA4893" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:349776" gene 5489041..5489613 /locus_tag="PA4894" /db_xref="GeneID:878633" CDS 5489041..5489613 /locus_tag="PA4894" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253581.1" /db_xref="GeneID:878633" /translation="MKLPKLLAALALLAAPALAFAHPGHGEHGLVAGLAHPLTGLDHL LAMFAVGLWAAQQQGAARLALPCTFVGTMLVGGLLGFEGLQLPFMETGIAASVLALGL CVALAVRPPLPLAMAATALFALAHGVAHGLELPDLSSPWLYALGFVAATAALHAAGYA LVRFLPQAAAPLVRLAGLASAGAGVWLLAG" misc_feature 5489098..5489601 /locus_tag="PA4894" /note="HupE / UreJ protein; Region: HupE_UreJ; pfam04955" /db_xref="CDD:428218" gene complement(5489630..5490652) /locus_tag="PA4895" /db_xref="GeneID:878635" CDS complement(5489630..5490652) /locus_tag="PA4895" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transmembrane sensor" /protein_id="NP_253582.1" /db_xref="GeneID:878635" /translation="MNDRASRRAPQAGDTELSGPPAAEAIAPQVLRETASWLLLMQEG PLAPAQQAELESWRSRSPEHQRAWRRAERLLANIGSLPPALARRALERPSGSGRRAVL RGLALLLGGAPLVWWGWRAQVWRDGFGADYLTAVGERRDLVLEDGSQVEMNTDSALDV RYDAGQRLLRLYRGEIYLRTAADRREPPRPFLVRTEQGLMRALGTAFSVRREGAETVL AVYEGAVQVRPEGAASAADGRVIEAGQRVRFDRQRIGPVESASEAALAWRQGLLVADD MPLRQWAGELMRYGGESIECEPSLDPLRVSGTFPVDDLPLALAMLAQTHGLRLVHQGR RVLIRR" misc_feature complement(5490431..5490559) /locus_tag="PA4895" /note="Domain of unknown function (DUF4880); Region: DUF4880; pfam16220" /db_xref="CDD:435227" misc_feature complement(5489636..5490301) /locus_tag="PA4895" /note="Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport [Inorganic ion transport and metabolism, Signal transduction mechanisms]; Region: FecR; COG3712" /db_xref="CDD:442926" gene complement(5490645..5491181) /locus_tag="PA4896" /db_xref="GeneID:878636" CDS complement(5490645..5491181) /locus_tag="PA4896" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /protein_id="NP_253583.1" /db_xref="GeneID:878636" /translation="MNAPSSCLSADRDGVATLYRENHAWLRNWLAYRLRSWGRGVADD LAHDTFLRILASRDGGQREAIRQPRAYLTRIANCVLVSWRRRQSLELAWLEALATLPE PLQPSPEQQSVIVETLHEIDALLDTLRPRVKQAFLMATLDGMKQKDIAQALGVALPTV KKFIHQAYVTCLSLMPDE" misc_feature complement(5490648..5491181) /locus_tag="PA4896" /note="RNA polymerase sigma factor; Provisional; Region: PRK12529" /db_xref="CDD:183574" gene 5491346..5494315 /locus_tag="PA4897" /db_xref="GeneID:879747" CDS 5491346..5494315 /locus_tag="PA4897" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253584.1" /db_xref="GeneID:879747" /translation="MPGANPASEEVMSLQRPIPSLARPLSRLSPLTLALRWALLGLSA AGAGLLGGDLAHAQSVGQHSAATRLDDATPRSYDIPAGSLGASLGAFASQSGLLLSFD PELTRGRTAPALKGRYSVLEGLQRVLSNTGLQVAAGTSGAYLLVEPRMSGEAPADLSP VVVSAAELADPQKETYTAPRSSVYLSSEDIDRFGRVSVGDLLQGIPGVQVGDSRNGGA LDVNIRGIQGQSRVAVRVDGAEQALDVYRGYAGTQQRSYIDPDLVSSVTVDKGPSTRS GAIGGSVEMRTIGVKDILVDGKDLGVRFTGDVWNNGVAPQHRSASSKTENLSSVPHDD RGSLFGSQAKSGSAAFAYRNEHLDLVAAYAQRNQGNYFSGKKGQDRYRVYNRYGREES SVAKVYNAGEEVLNSSSETESYLLKATWRIADEHTLDLGYRRYDGRTGEIMPSDIFRF GTAGIYQYPLSEVKIDTYTARYRYLPENNPLVDLSTGLWMTEAKSDMLTSVLAPRSQA YRSDRNWTRQDNRRIGGDLNNVARFETDFGDFKLDLGGSFQVEDIQPQKSVVTTLHDI NANRTLRDATRQEYGLNGKLEFKPVERLTLWGGGRYSHFNSKDNGISASPRREDRDMR FITVSRPGYYGSMMWFPDQNGQYTDATDPRLNNGIVTNNTNNPFEGIPFDEFGPANVT VHPSRVTNVVTGYNYSKKGSSRGGGFSPAFGINFELAPDTFVYASYTEGLRLPSLFET SQGTLQVEPGKDLKPERSRSWEIGASALRDSLLADGDSAAIKLAYFNNTIKNYITRYY DPGQMGLMTFSNTDSYRTSGLELQSHYDAGRVFADLSATYYLKTETCDAAFAARLRAG ANRYQRTENTPNCTPGSFMGSYTNTQNPPRLATNLTAGLRFFDQALTLGGRMTYTSGP TATADKPWQVGATTPQIEYRSVQLFDLFLKYKLFEHTELNASLQNLTDRYYLDPLAQS FMPAPGRTLRVGMQAKF" misc_feature 5491634..5491783 /locus_tag="PA4897" /note="Secretin and TonB N terminus short domain; Region: STN; smart00965" /db_xref="CDD:198033" misc_feature 5491817..5494312 /locus_tag="PA4897" /note="TonB-dependent heme/hemoglobin receptor family protein; Region: TonB-hemin; TIGR01785" /db_xref="CDD:273807" gene complement(5494460..5495713) /gene="opdK" /locus_tag="PA4898" /db_xref="GeneID:879748" CDS complement(5494460..5495713) /gene="opdK" /locus_tag="PA4898" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="vanillate porin OpdK" /protein_id="NP_253585.1" /db_xref="GeneID:879748" /translation="MKIRRKTAVPRNAGAVLPMLACLAAQAAEGGFLEDAKTDLVLRN YYFNRDFRDHDAGKSLVDEWAQGFILKFSSGYTPGTVGVGLDAIGLFGVKLNSGRGTS NSELLPLHDDGRAADNYGRVGVAAKLRVSASELKIGEMLPDIPLLRYDDGRLLPQTFR GFAVVSRELPGLALQAGRFDAVSLRNSADMQDLSAWSAPTQKSDGFNYAGAEYRFNRE RTQLGLWHGQLEDVYRQSYANLLHKQRVGDWTLGANLGLFVDRDDGAARAGEIDSHTV YGLFSAGIGLHTFYLGLQKVGGDSGWQSVYGSSGRSMGNDMFNGNFTNADERSWQVRY DYDFVGLGWPGLIGMVRYGHGSNATTKAGSGGKEWERDVELGYTVQSGPLARLNVRLN HASNRRSFNSDFDQTRLVVSYPLSW" misc_feature complement(5494466..5495626) /gene="opdK" /locus_tag="PA4898" /note="outer membrane porin, OprD family; Region: OprD; pfam03573" /db_xref="CDD:460978" gene complement(5495821..5497290) /locus_tag="PA4899" /db_xref="GeneID:879749" CDS complement(5495821..5497290) /locus_tag="PA4899" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase" /protein_id="NP_253586.1" /db_xref="GeneID:879749" /translation="MSDSRYTDLGLQPLAGEWRHGRAGRRLKVSNPFDGSLLLEIEQA DRDDLDAAYAKAAEVQPAWAALGPSARAAVLYKAVEVFDRRHEEIVDWIIRESGSTRL KAEIEWGAARAITLESASFPARVHGRIVESDVPGKESRVYRSAIGVVGVISPWNFPLH LTQRSIAPALALGNAVVVKPASDTPVCGGLLLARIFEEAGLPAGLFSVVVGPGSEIGD AFVEHPVPGLVTFTGSTPVGRNIGRIASGGAHLKHVALELGGNSPFVVLGDADLEQAV NAAVFGKFLHQGQICMAINRIIVEDSLYDAFAARFVERVKGLRVGDPQRADTAVGPIV NARQLEGLLEKIRLARQEGAKPLYEGGVDGQLLAPHVFGEVTATMEIARDEIFGPLVG LLRARDEAHALELANASEYGLSSAVFSRDLERAVRFARQLRAGMTHVNDIPVNDEANA PFGGEKNSGLGRFNGDWAIEEFTTDHWISVQHAPRQYPF" misc_feature complement(5495845..5497245) /locus_tag="PA4899" /note="NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like; Region: ALDH_HBenzADH; cd07151" /db_xref="CDD:143469" misc_feature complement(order(5495935..5495937,5496052..5496054, 5496130..5496132,5496136..5496138,5496418..5496420, 5496514..5496522,5496568..5496573,5496580..5496582, 5496589..5496600,5496745..5496750,5496754..5496756, 5496799..5496801,5496823..5496837)) /locus_tag="PA4899" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:143469" misc_feature complement(order(5496418..5496420,5496427..5496429, 5496520..5496522,5496823..5496825)) /locus_tag="PA4899" /note="catalytic residues [active]" /db_xref="CDD:143469" gene complement(5497313..5498653) /locus_tag="PA4900" /db_xref="GeneID:882176" CDS complement(5497313..5498653) /locus_tag="PA4900" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_253587.1" /db_xref="GeneID:882176" /translation="MNRQSAAAVIDAARFNRTHWLILGWGCFIMLFDGYDMVIYGSVV PRLMQEWQLSPVQAGTLGSCALFGMLFGGTLLAPLADRFGRRRLVIATTLLASLAAFL TGHARDPLELGAGRFFTGLALGALVPSAINLISEFAPAGRRSTLVTVMSAFYSVGAVL SALLAIAMIPAWGWQSVFYVAVLPVLAVPLMLRWLPESAAFLELKGRRAELDALLRKV DPDYRPGAERANAVAAEAPSGRVAQLFEGRQAVGTLLLWVAFAMCMLMSYGLNTWLPK LMAGGGYALGSSLAFLVTLNVGATLGALFGGWLADRLGAGRTLVLFFALAAASLAALG LGPGPWLLNGLLVVAGATTIGTLAVIHAYAAQFYPAWVRSTGVGWAAGVGRLGAIAGP MLGGSLLALELPFQQNFLAFAAPGVIGALAIACIHLRPRVPAEASVDATAKKPL" misc_feature complement(5497364..5498587) /locus_tag="PA4900" /note="4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; Region: MFS_PcaK_like; cd17365" /db_xref="CDD:340923" misc_feature complement(order(5497490..5497492,5497499..5497504, 5497511..5497516,5497523..5497525,5497571..5497573, 5497583..5497585,5497595..5497600,5497745..5497747, 5497757..5497759,5497838..5497840,5497847..5497855, 5497862..5497867,5497874..5497876,5498180..5498182, 5498189..5498194,5498201..5498203,5498261..5498263, 5498270..5498278,5498282..5498287,5498435..5498437, 5498531..5498533,5498540..5498545,5498552..5498557)) /locus_tag="PA4900" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340923" gene complement(5498740..5500326) /gene="mdlC" /locus_tag="PA4901" /db_xref="GeneID:882177" CDS complement(5498740..5500326) /gene="mdlC" /locus_tag="PA4901" /EC_number="4.1.1.7" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="benzoylformate decarboxylase" /protein_id="NP_253588.1" /db_xref="GeneID:882177" /translation="MKTVHSASYEILRRHGLTTVFGNPGSNELPFLKDFPEDFRYILG LHEGAVVGMADGFALASGRPAFVNLHAAAGTGNGMGALTNAWYSHSPLVITAGQQVRS MIGVEAMLANVDAGQLPKPLVKWSHEPACAQDVPRALSQAIQTASLPPRAPVYLSIPY DDWAQPAPAGVEHLAARQVSGAALPAPALLAELGERLSRSRNPVLVLGPDVDGANANG LAVELAEKLRMPAWVAPSASRCPFPTRHACFRGVLPAAIAGISRLLDGHDLILVVGAP VFRYHQFAPGDYLPAGAELVQVTCDPGEAARAPMGDALVGDIALTLEALLEQVRPSAR PLPEALPRPPALAEEGGPLRPETVFDVIDALAPRDAIFVKESTSTVTAFWQRVEMREP GSYFFPAAGGLGFGLPAAVGAQLAQPRRQVIGIIGDGSANYGITALWSAAQYRVPAVF IILKNGTYGALRWFAGVLEVPDAPGLDVPGLDFCAIARGYGVEALHAATREELEGALK HALAADRPVLIEVPTQTIEP" misc_feature complement(5498758..5500326) /gene="mdlC" /locus_tag="PA4901" /note="benzoylformate decarboxylase; Reviewed; Region: PRK07092" /db_xref="CDD:235931" gene 5500427..5501323 /locus_tag="PA4902" /db_xref="GeneID:882267" CDS 5500427..5501323 /locus_tag="PA4902" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253589.1" /db_xref="GeneID:882267" /translation="MSPIDLNLIRTFVTLYEAGSVTLAAERLFVTQPSVSYALARLRE LFDDALFTRTRDGIQPTFVAEQLYGTFRESLTRIEGAVQSVRHFDPATTERRFRIALT DLGEVGFLSLILERLTRDAPFAEVEVLPLQVDEVGAWLSSAKVDAAICRQPVPGARSQ RVLHERYVCLLSDRHPRIGDSLSLEQYLAERHIVVTRTSGHGIAEDVLEAMQVQRRIS LRVPHFSVLPKIIPGTELLTILPAQIAYRFVAEGGMRMLELPFTLPPFDVSLHWHESS ERSAALNWFRTTIAEAIIAAQR" misc_feature 5500442..5500609 /locus_tag="PA4902" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 5500712..5501302 /locus_tag="PA4902" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators that are involved in the catabolism of dinitrotoluene, naphthalene and gamma-hexachlorohexane; contains the type 2 periplasmic binding fold; Region: PBP2_DntR_NahR_LinR_like; cd08459" /db_xref="CDD:176148" misc_feature order(5500730..5500732,5500736..5500741,5500751..5500753, 5500919..5500921,5501027..5501029,5501228..5501230) /locus_tag="PA4902" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176148" misc_feature order(5500733..5500735,5500742..5500747,5500754..5500759, 5500766..5500771,5500775..5500780,5500787..5500792, 5500796..5500810,5500814..5500816,5500997..5500999, 5501078..5501092,5501099..5501104,5501111..5501116, 5501123..5501125,5501165..5501167) /locus_tag="PA4902" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176148" gene complement(5501338..5502672) /locus_tag="PA4903" /db_xref="GeneID:882268" CDS complement(5501338..5502672) /locus_tag="PA4903" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_253590.1" /db_xref="GeneID:882268" /translation="MNRDLRRALDDEPMRPFQWLAVAVCIVLNLIDGFDVLVMAFTAS SVAAEWNLGGAEIGLLLSAGLFGMAAGSLFIAPWADRWGRRPLILACLALSGLGMLAS ALSQAAWQLALLRGLTGLGIGGILASSNVIASEYASRRWRGLAVSLQSTGYALGATLG GLLAVWLIGAWGWRSVFVFGAGLTLAVIPLVCLCLPESLDFLLARRPPRALQRVNALA RRLGRAALAELPSPPGGGAEHGSRLARLLCVAQRRTTLLLWALFFLVMFGFYFIMSWT PKLLVAAGLSTAQGITGGTLLSIGGIFGAALLGGLAARFRLERVLALFMLLTAALLAL FSLSAGLPGAALPLGLLIGLCANACVAGLYALAPSLYDASVRATGVGWGIGVGRGGAI LSPLVAGLLLDDGWQPLSLYGAFAAVFVVAAAVLPLLGARRRERSPTLGDAA" misc_feature complement(5501467..5502663) /locus_tag="PA4903" /note="benzoate transport; Region: 2A0115; TIGR00895" /db_xref="CDD:273327" gene 5503051..5504106 /gene="vanA" /locus_tag="PA4904" /db_xref="GeneID:877879" CDS 5503051..5504106 /gene="vanA" /locus_tag="PA4904" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="vanillate O-demethylase oxygenase" /protein_id="NP_253591.1" /db_xref="GeneID:877879" /translation="MFPKNAWYVACTPDELAGKPLGRRICDEPMVFYRGEDGRVAALE DFCPHRGAPLSLGFVEDGVLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERH GFVWVWPGAEEQADDALIPRLEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYV HASSIGQKEIDEAAPTTRVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQ ICRFTPPSHVLIEVGVAHAGHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNF QAHDQALTESIREGQGKIFGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQARRIIE RLLADERQAAAPNRAQA" misc_feature 5503060..5504091 /gene="vanA" /locus_tag="PA4904" /note="Chlorophyllide a oxygenase/letal leaf spot protein [Coenzyme transport and metabolism]; Region: PobA; COG5749" /db_xref="CDD:444459" gene 5504121..5505074 /gene="vanB" /locus_tag="PA4905" /db_xref="GeneID:877880" CDS 5504121..5505074 /gene="vanB" /locus_tag="PA4905" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="vanillate O-demethylase" /protein_id="NP_253592.1" /db_xref="GeneID:877880" /translation="MIEVIVGAIRLEAQDIHSFELFRADGAALPSFEPGAHIDLHLPN GLVRQYSLCGPAERPRHYRIAVLRCRDSRGGSATLHAELRVGQRLHIGEPRNLFPLSP EPGPHLLFAGGIGITPLLAMAERLARDGADFQLHYCAHSGERAAFVDYLGRCAFADRV HCHFDHGESSRRADLRALLATSPRDAQLYLCGPAGFMQWIEESARELGWEASRLHREH FAAAPRDASADGTFEVQLASNGALIRVAAGQTVLAALREAGVDLPASCEQGICGTCLT RVLDGEPEHRDLYLSEEEQAANDCFTPCCSRSRSPRLVLDL" misc_feature 5504142..5504780 /gene="vanB" /locus_tag="PA4905" /note="Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster. PDR has an an N-terminal ferrredoxin reductase (FNR)-like NAD(H) binding domain and a C-terminal iron-sulfur...; Region: PDR_like; cd06185" /db_xref="CDD:99782" misc_feature order(5504262..5504267,5504271..5504273,5504313..5504321, 5504337..5504339,5504343..5504348,5504469..5504471, 5504775..5504777) /gene="vanB" /locus_tag="PA4905" /note="FMN-binding pocket [chemical binding]; other site" /db_xref="CDD:99782" misc_feature order(5504262..5504264,5504268..5504273) /gene="vanB" /locus_tag="PA4905" /note="flavin binding motif [active]" /db_xref="CDD:99782" misc_feature order(5504337..5504339,5504346..5504348,5504355..5504357, 5504376..5504378) /gene="vanB" /locus_tag="PA4905" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99782" misc_feature order(5504445..5504447,5504457..5504468,5504472..5504474) /gene="vanB" /locus_tag="PA4905" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99782" misc_feature order(5504460..5504465,5504532..5504540,5504694..5504699) /gene="vanB" /locus_tag="PA4905" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99782" misc_feature 5504820..5505071 /gene="vanB" /locus_tag="PA4905" /note="Ferredoxin [Energy production and conversion]; Region: Fdx; COG0633" /db_xref="CDD:440398" gene complement(5505071..5505784) /locus_tag="PA4906" /db_xref="GeneID:878001" CDS complement(5505071..5505784) /locus_tag="PA4906" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253593.1" /db_xref="GeneID:878001" /translation="MSKPGQRVLAELRKLIASGELAAGERIVEIPTAERLQVSRMPVR IALRTLEQEGLLCKTGRGYRVRAVTREDIAGAVEVRGVLEGLAARQAAERGLSAEARA TLEECLAEGDRLFANGQVLLEELERYQRMNMRFHRTIIEASGNPAIAVALARNDHLPF ASVSALAVDRDNLEQEFRRFNFAHMQHHAVVDALVNGQGARAEAIMREHANATLRYAD YFDPARQGVTVLHGDVAAD" misc_feature complement(5505134..5505769) /locus_tag="PA4906" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: GntR; COG1802" /db_xref="CDD:441407" gene complement(5505848..5506609) /locus_tag="PA4907" /db_xref="GeneID:878002" CDS complement(5505848..5506609) /locus_tag="PA4907" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_253594.1" /db_xref="GeneID:878002" /translation="MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAG ELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDD WDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVE QFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAE TIFWIMNQPAHLNINSLEIMPVSQSWAGFAIHRES" misc_feature complement(5505860..5506603) /locus_tag="PA4907" /note="classical (c) SDR, subgroup 5; Region: SDR_c5; cd05346" /db_xref="CDD:187604" misc_feature complement(order(5506046..5506051,5506055..5506066, 5506142..5506144,5506154..5506156,5506193..5506201, 5506283..5506285,5506349..5506357,5506433..5506441, 5506505..5506513,5506568..5506579,5506583..5506585)) /locus_tag="PA4907" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187604" misc_feature complement(order(5505860..5505862,5506094..5506099, 5506103..5506108,5506112..5506117,5506124..5506129, 5506136..5506141,5506145..5506153,5506157..5506189, 5506232..5506234,5506244..5506246,5506253..5506255, 5506262..5506267,5506274..5506279,5506286..5506291, 5506298..5506303,5506307..5506312,5506325..5506330, 5506424..5506426)) /locus_tag="PA4907" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187604" misc_feature complement(order(5505860..5505913,5505917..5505919, 5505923..5505925,5505944..5505946,5505965..5505967, 5506103..5506111,5506115..5506120,5506127..5506129, 5506136..5506141,5506145..5506150,5506160..5506171, 5506175..5506186,5506253..5506255,5506262..5506264, 5506274..5506276,5506286..5506288,5506298..5506303, 5506307..5506312,5506325..5506327,5506424..5506426)) /locus_tag="PA4907" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:187604" misc_feature complement(order(5506142..5506144,5506154..5506156, 5506193..5506195,5506280..5506282)) /locus_tag="PA4907" /note="active site" /db_xref="CDD:187604" gene complement(5506966..5507898) /locus_tag="PA4908" /db_xref="GeneID:879734" CDS complement(5506966..5507898) /locus_tag="PA4908" /EC_number="4.3.1.12" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="ornithine cyclodeaminase" /protein_id="NP_253595.1" /db_xref="GeneID:879734" /translation="MHSLRFFSNAEVAERLAYPQLIEALRIGLAKPCSAPLRNCHALP AQASLLQMPVWQAGAGIGVKLVTVFPGNGARGLPAVAAVFALFDGEDGRPLALLEASE LTARRTACSSALAADYLARDDARRLLVVGCGTLAAHMVRAHACVRDYRHIDIWGRDPA KAAALAARLREEGYPARAADGLRAAVEAADCVSCVTTSREALVRGAWLKPGVHLDLVG AFLPSMRETDVLAVARARVVVDTRAGALEEAGDLLQAIAEGAIGREAISTELRDLLSG AGRRGDPGEITLFKSVGYALEDLVAARRVVDNAA" misc_feature complement(5506969..5507889) /locus_tag="PA4908" /note="ornithine cyclodeaminase family protein; Region: PRK06141" /db_xref="CDD:180421" gene complement(5507969..5508685) /locus_tag="PA4909" /db_xref="GeneID:879735" CDS complement(5507969..5508685) /locus_tag="PA4909" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_253596.1" /db_xref="GeneID:879735" /translation="MSAALLEFREVDVFYGPIQALKKVSLQVNEGETVSLIGANGAGK STLLMSIFGQPRAAAGQILYRGQDIRQKSAHYVASNGIAQSPEGRRVFPDMSVEENLL MGTIPIGMDHAEEDMQRMFELFPRLKERRNQRAMTMSGGEQQMLAIARALMSRPKLLL LDEPSLGLAPIVVKQIFQTLRELARSGMTIFLVEQNANHALKLSDRAYVMVTGEIRMS GSGEELLGNQEVRNAYLGGH" misc_feature complement(5507975..5508679) /locus_tag="PA4909" /note="ABC-type branched-chain amino acid transport system, ATPase component LivF [Amino acid transport and metabolism]; Region: LivF; COG0410" /db_xref="CDD:440179" gene complement(5508682..5509554) /locus_tag="PA4910" /db_xref="GeneID:878157" /db_xref="PseudoCap:PA4910" CDS complement(5508682..5509554) /locus_tag="PA4910" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_253597.1" /db_xref="GeneID:878157" /db_xref="PseudoCap:PA4910" /translation="MSDKILSVEHLMMHFGGIKALNDVNLDVERGSITALIGPNGAGK TTVFNCLTGFYKATGGNILLNTQGRTTDVIQVLGEPFQLDDFVKPPQLGSRLYYKMFG GTHLVNRAGLARTFQNIRLFKDMSVVENLLVAQHMFVNRNLLAGILNTPGYRRAESEA LDHAFYWLEVVDLVDCANRLAGEMSYGQQRRLEIARAMCTRPELICLDEPAAGLNPAE THALSNIVRYLRDHHGITVLLIEHDMGMVMNISDHIIVLDHGDVIARGNPEQIRHDEK VIAAYLGADEEELS" misc_feature complement(5508700..5509554) /locus_tag="PA4910" /note="leucine/isoleucine/valine transporter ATP-binding subunit; Provisional; Region: livG; PRK11300" /db_xref="CDD:183080" gene complement(5509551..5510828) /locus_tag="PA4911" /db_xref="GeneID:878158" CDS complement(5509551..5510828) /locus_tag="PA4911" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter permease" /protein_id="NP_253598.1" /db_xref="GeneID:878158" /translation="MSNETSIDLKQCVLDAVLSGLIALVVFGPIVGVVLDGYGFNLHY ERVGWIIAIVMAGRFLLSLYLQTRGGRAVLERFEGAGSGVHVLPPGYKTRLRWIVPLI LVAAVIFPFFASKYLLAVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLA LGYQYLGLGFWTVLPLAALTAAVAGAILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNW LSFTGGPNGMPAPAPTFLGLEFGRRAKDGGVPIHEFLGIAYNPNMKFLFIYVVLFLVV LLVLYIKHRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFMLGASTAGLAGVFF ASYQGFVNPSSFNFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFADIRVL LLGILMVVMMIWRPRGLIRISRVGFAPRKGVAP" misc_feature complement(5509587..5510786) /locus_tag="PA4911" /note="leucine/isoleucine/valine transporter permease subunit; Provisional; Region: livM; PRK11301" /db_xref="CDD:236896" gene complement(5510839..5511753) /locus_tag="PA4912" /db_xref="GeneID:878521" /db_xref="PseudoCap:PA4912" CDS complement(5510839..5511753) /locus_tag="PA4912" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter" /protein_id="NP_253599.1" /db_xref="GeneID:878521" /db_xref="PseudoCap:PA4912" /translation="MDGIFLQQMINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVY MISAYLSAIALALLAFFGLQNFPLLILGTLLFTVLVTCTYGWVIERIAYKPLRNSTRL APLISAIGMSLILQNYVQVAQGPRQQGIPTLLDGALKFHVGDGFVQLTYTKLFILIAS LIGMAVLTYVIRYTKLGRMCRATQQDRKMASILGINTDRVISYVFVIGAAMAALAGVL ITMNYGTFDFYAGFIIGIKAFTAAVLGGIGSLPGAMLGGLVLGVAEAQFSGMVNTDYK DVFAFSLLVLILIFRPQGLLGRPQIAKV" misc_feature complement(5510842..5511741) /locus_tag="PA4912" /note="Transmembrane subunit (TM) of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which are involved in the uptake of branched-chain amino acids (AAs), as well as TMs of transporters involved in the uptake of...; Region: TM_PBP1_branched-chain-AA_like; cl00454" /db_xref="CDD:444914" misc_feature complement(5511136..5511192) /locus_tag="PA4912" /note="TM-ABC transporter signature motif [active]" /db_xref="CDD:119324" gene complement(5511988..5513112) /locus_tag="PA4913" /db_xref="GeneID:878522" CDS complement(5511988..5513112) /locus_tag="PA4913" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_253600.1" /db_xref="GeneID:878522" /translation="MSKKLFRKGILALAVSSVMGLSTHALADVVIGVAGPHTGANASF GEQYWRGASQAAEDINAAGGINGEKIKLVKADDACEPKQAVAVANRLVDQDKAIAVVG HFCSSSTIPASEVYDEAGIIAITPGSTNPQVTERGLSGMFRMCGRDDQQGVVAGDYIV NVLKAKKVAVIHDKDTYGQGLADATRAQLNKLGVKEVLYEGLTRGEKDFNALVTKIRA SGAEVVYFGGLHPEAGPLVRQMREQGLTARFMSDDGVVTDELATTAGGPQYVKGVLMT FGADPRLIPDGKAVVEKFRAGGFEPEGYTLYSYASIQSLAAAFNGAGANDPAKAAEWL KSHPVQTVMGKKEWDKKGDLKVSDYVVYEWDDKGKYHQLP" misc_feature complement(5512021..5513025) /locus_tag="PA4913" /note="type 1 periplasmic ligand-binding domain of ABC (Atpase Binding Cassette)-type active transport systems involved in the transport of all three branched chain aliphatic amino acids (leucine, isoleucine and valine); Region: PBP1_ABC_LIVBP-like; cd06342" /db_xref="CDD:380565" misc_feature complement(order(5512354..5512356,5512426..5512428, 5512582..5512584,5512729..5512734,5512795..5512803)) /locus_tag="PA4913" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:380565" gene 5513732..5514670 /locus_tag="PA4914" /db_xref="GeneID:879725" CDS 5513732..5514670 /locus_tag="PA4914" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253601.1" /db_xref="GeneID:879725" /translation="MLNKRRLPSMTALQCFEAVARHLSFTRAAEELSLTQSAMSKQVA QLEEQLQHALFRRVRKRLQLTPAGELYLAEVRRILQQVELSTRFLLSYGGETEVLRVA TPPTFGARWLIPQLNGWRHRHPNIHLDLRQELEPDDLRQGHCDLAFFFGPGTLPGAEC IRLFGEQLVAVCAPSLLPAGGLDEPTQLAGLVLLQNASRAEAWHDWFASLERNCQGCY HGPRFDTFYMCIRAAQAGCGVALLPRFLVEEELAEGKLAIAWPHALPSQEAYYLAYPE HAAEVPKVRHFIEWMVERLEQEQPSAGPRQTRHGPV" misc_feature 5513744..5514628 /locus_tag="PA4914" /note="DNA-binding transcriptional activator GcvA; Provisional; Region: PRK11139" /db_xref="CDD:182990" protein_bind 5514314..5514326 /locus_tag="PA4914" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4915" /bound_moiety="AmrZ" gene 5514727..5516352 /locus_tag="PA4915" /db_xref="GeneID:879726" CDS 5514727..5516352 /locus_tag="PA4915" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_253602.1" /db_xref="GeneID:879726" /translation="MLTGVTVRIRLLVLALLPLTMLVTVIAMALANASRLDASFQDLF NNRMKPISQLKIVADAVAVSVVDALHKYRAGVFDEERLQQELSGALSRIEKSWADYSA DHRTAAEKEIIESLVPTLERVKRMTLAYGEQARAGSLRNVEAGTFNREMYGAFDPLGT ALSTLIDLQLSEGAKLNEQMEKRYDSMRTTFLLIGAAALVLIVAAAWFISLSIMRPLS DLRGVIRRVQDSSNLTLRADARGRDEVSDTARAFNMMLESQQALLRHLAETARKLTIT SDEMSAISNQVSHVATSQGDQTDMVATAVHQMSMAVQDVARNAQAAAASAESANSEAH TGTGLVHANLDAIQGLSVMVGEAGAVIDTLRNKTDEISTVLEVIQNIAQQTNLLALNA AIEAARAGEAGRGFAVVADEVRSLATNTHKATETIREMIEALQAGASSAVSVMQQSRE QAQVSVQRAHEAGKALGLIAQAVEGIAQSNAQISTATEEQTATASEVSQNIDSLNASI GEVAEGAVKTSTSSVELAKLANGLEQQIQRFTV" misc_feature 5514751..5516349 /locus_tag="PA4915" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene complement(5516399..5517094) /locus_tag="PA4916" /db_xref="GeneID:878462" CDS complement(5516399..5517094) /locus_tag="PA4916" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253603.1" /db_xref="GeneID:878462" /translation="MSSAEVLASVDIVALRLNPGHGLELLLIRRAQAPFAGQWALPGV LVNGRSADHSLDDAAVRALRDKARLEPAYIEQVATVGNAVRDPRGWSLSVFYLVLVGP DTQVEDDDLDFVPLRDVRSERFALPFDHAQLVQQACERLASKSVYSALPLFLLAPRFT VAEALKAFECAIGQEVQHSSLRGRLERMKEAGWVEDTGERQRPPMGRPQHVLHFTPKP GGAFVFDRSLLAS" misc_feature complement(5516678..5517070) /locus_tag="PA4916" /note="bifunctional NMN adenylyltransferase/ADP-ribose pyrophosphatase and similar proteins; Region: NUDIX_NadM_like; cd18873" /db_xref="CDD:467585" gene complement(5517109..5517711) /locus_tag="PA4917" /db_xref="GeneID:878463" CDS complement(5517109..5517711) /locus_tag="PA4917" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253604.1" /db_xref="GeneID:878463" /translation="MRDEISSRIRRLPAGMSGGRAPDFALAVYGGAFDPPHPGHESVI RRALLCAERVALVPSHRHAFGKRMGDFELRCRWLARLARRIDPRRVYCEPIEAGLMPD RPAVYSIDLLEALAARSGLASARIALLIGADNEAELPRFERAAELCWRFGRLVAEERL PLHSSMIRQRLREGLAVPEAWCLPEVKDELHCYGGERQAV" misc_feature complement(5517190..5517636) /locus_tag="PA4917" /note="nucleotidyl transferase superfamily; Region: nt_trans; cl00015" /db_xref="CDD:469580" misc_feature complement(order(5517214..5517222,5517592..5517603)) /locus_tag="PA4917" /note="active site" /db_xref="CDD:173912" misc_feature complement(order(5517220..5517222,5517592..5517594, 5517601..5517603)) /locus_tag="PA4917" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:173912" misc_feature complement(5517592..5517603) /locus_tag="PA4917" /note="HIGH motif; other site" /db_xref="CDD:173912" gene 5517821..5518480 /locus_tag="PA4918" /db_xref="GeneID:878464" CDS 5517821..5518480 /locus_tag="PA4918" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253605.1" /db_xref="GeneID:878464" /translation="MNRPSKIASFDVDAQKGFTPLCPDELPVPGGDAIGGALNQLASR AALRLGSKDAHSPKAAWVVESAEQMLRPLAYPDADLTWVSHCVPGTPGFELLDELPRP IDYDFFVWKGVEPDLHPYGACYHDLAERRSTGVIEYLRQNGVSHVLVGGLALDYCVKN TALQLRRAGFEVLLYLPACRAIAEDTAQRACDEMRDAGVILCADLERLDSALAGADKE K" misc_feature 5517836..5518426 /locus_tag="PA4918" /note="Nicotinamidase/pyrazinamidase (PZase). Nicotinamidase, a ubiquitous enzyme in prokaryotes, converts nicotinamide to nicotinic acid (niacin) and ammonia, which in turn can be recycled to make nicotinamide adenine dinucleotide (NAD). The same enzyme is...; Region: nicotinamidase; cd01011" /db_xref="CDD:238493" misc_feature order(5517857..5517859,5518151..5518153,5518289..5518291) /locus_tag="PA4918" /note="catalytic triad [active]" /db_xref="CDD:238493" misc_feature order(5517977..5517979,5517983..5517985,5518073..5518075) /locus_tag="PA4918" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238493" misc_feature 5518274..5518279 /locus_tag="PA4918" /note="conserved cis-peptide bond [active]" /db_xref="CDD:238493" gene 5518483..5519682 /gene="pncB1" /locus_tag="PA4919" /db_xref="GeneID:882212" CDS 5518483..5519682 /gene="pncB1" /locus_tag="PA4919" /EC_number="6.3.4.21" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nicotinate phosphoribosyltransferase" /protein_id="NP_253606.1" /db_xref="GeneID:882212" /translation="MAESVFAERIVQNLLDTDFYKLTMMQAVLHNYPNAEVEWEFRCR NAEDLRPYLAEIRYQIERLAEVEVTADQLAFLERIPFMKPDFIRFLSLFRFNLRYVHT GIEDGQLAIRLRGPWLHVILFEVPLLAIVSEVRNRYRYREVVLEQVGEQLYRKLDWLS AQASSEELAEFQVADFGTRRRFSYRTQEEVVHILKRDFPGRFVGTSNVHLAREYDLKP IGTMAHEWLMAHQQLGPRLVDSQQAALDCWVREYRGQLGIALTDCITMDAFLDDFDLY FAKLFDGLRHDSGDPLAWAEKAIAHYRRLGIDPLSKTLVFSDGLDMPKALQLFRALRG KINVSFGIGTNLTCDIPGVEPMNIVLKMTACNGHPVAKISDAPGKTQCRDENFVAYLR HVFNVPA" misc_feature 5518489..5519679 /gene="pncB1" /locus_tag="PA4919" /note="nicotinate phosphoribosyltransferase; Provisional; Region: PRK05321" /db_xref="CDD:235406" misc_feature order(5519014..5519022,5519095..5519100,5519341..5519343, 5519431..5519436,5519503..5519505,5519509..5519514, 5519521..5519523) /gene="pncB1" /locus_tag="PA4919" /note="active site" /db_xref="CDD:238695" gene 5519711..5520538 /gene="nadE" /locus_tag="PA4920" /db_xref="GeneID:882213" CDS 5519711..5520538 /gene="nadE" /locus_tag="PA4920" /EC_number="6.3.1.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NAD synthetase" /protein_id="NP_253607.1" /db_xref="GeneID:882213" /translation="MQQIQRDIAQALQVQPPFQSEADVQAQIARRIAFIQQCLKDSGL KTLVLGISGGVDSLTAGLLAQRAVEQLREQTGDQAYRFIAVRLPYQVQQDEADAQASL ATIRADEEQTVNIGPSVKALAEQLEALEGLEPAKSDFVIGNIKARIRMVAQYAIAGAR GGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLAKHQVRALARALGAPENLVEKIPT ADLEDLRPGHPDEASHGVTYAEIDAFLHGQPLREEAARVIVDTYHKTQHKRELPKAP" misc_feature 5519720..5520535 /gene="nadE" /locus_tag="PA4920" /note="ammonia-dependent NAD(+) synthetase; Region: nadE; PRK00768" /db_xref="CDD:234831" gene 5520672..5521595 /locus_tag="PA4921" /db_xref="GeneID:878045" CDS 5520672..5521595 /locus_tag="PA4921" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253608.1" /db_xref="GeneID:878045" /translation="MRTRLPALLLGVLLAGQACGHTSPLLAPVRQIHAFGDSYSDNGE SQRLTREMLAKGIAGAQALPGEVYWQGRWSNGPTAVEVLARQLGAQLADHAVGGAKSG ADNYYGWMSAYRHTGLAGQVDAYLATLDGKPVDGQALHFIFVSANDFFEHEDFAGEQP LEQLAGSSVANIRAAVQRLGEAGARRFLVVSSTDLSVVPAVVAGNRVERAQRYLQAVN ASLPIQLAALRKTRGLELSWFDHLTFSRHLRRNPARYGLVELDAPCQPTQPSVRPACA NPDQYYFWDEWHPTRRVHQLAGEAMAARYAR" misc_feature 5520765..5521580 /locus_tag="PA4921" /note="Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its...; Region: fatty_acyltransferase_like; cd01846" /db_xref="CDD:238882" misc_feature order(5520783..5520785,5520963..5520965,5521110..5521112, 5521524..5521526,5521533..5521535) /locus_tag="PA4921" /note="active site" /db_xref="CDD:238882" misc_feature order(5520783..5520785,5521524..5521526,5521533..5521535) /locus_tag="PA4921" /note="catalytic triad [active]" /db_xref="CDD:238882" misc_feature order(5520783..5520785,5520963..5520965,5521110..5521112) /locus_tag="PA4921" /note="oxyanion hole [active]" /db_xref="CDD:238882" gene complement(5521664..5522110) /gene="azu" /locus_tag="PA4922" /db_xref="GeneID:878046" CDS complement(5521664..5522110) /gene="azu" /locus_tag="PA4922" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="azurin" /protein_id="NP_253609.1" /db_xref="GeneID:878046" /translation="MLRKLAAVSLLSLLSAPLLAAECSVDIQGNDQMQFNTNAITVDK SCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIA HTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK" misc_feature complement(5521670..5522044) /gene="azu" /locus_tag="PA4922" /note="Azurin is a redox partner for enzymes such as nitrite reductase or arsenite oxidase; Region: Azurin; cd13922" /db_xref="CDD:259989" gene 5522386..5522973 /locus_tag="PA4923" /db_xref="GeneID:879697" CDS 5522386..5522973 /locus_tag="PA4923" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253610.1" /db_xref="GeneID:879697" /translation="MTLRSVCVFCGASPGASPVYQEAAVALGRHLAERGLTLVYGGGA VGLMGTVADAALAAGGEVIGIIPQSLQEAEIGHKGLTRLEVVDGMHARKARMAELADA FIALPGGLGTLEELFEVWTWGQLGYHAKPLGLLEVNGFYDPLLTFLDHLVDERFVRAE HRGMLQRGASPEALLDALAAWTPSVAPKWVDRTPQ" misc_feature 5522398..5522949 /locus_tag="PA4923" /note="Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family [Nucleotide transport and metabolism]; Region: PpnN; COG1611" /db_xref="CDD:441219" gene complement(5522986..5523681) /locus_tag="PA4924" /db_xref="GeneID:879698" CDS complement(5522986..5523681) /locus_tag="PA4924" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253611.1" /db_xref="GeneID:879698" /translation="MFFRLLLIAVLLAVSACSSKAPGPGASVPKVVRGEYRVKRGDTL YSIATRHGWNYKDLARANGIRPPYAVKVGQVVRFDGRKSTYVASSRSSSNTRARKPPP PPPSVTLRGWQWPMKGPVIRRFSSSDKLNKGIRIAGTLGQPVQASLAGKVVFAVNNMR GYGNLVIIQHGTSYTSTYAHNSRLLVKEGQMVGKGQKIAEAGSSDADRVQLYFEIRQN GRPLDPLSLLPPS" misc_feature complement(5523022..5523576) /locus_tag="PA4924" /note="murein hydrolase activator NlpD; Region: nlpD; PRK10871" /db_xref="CDD:236782" gene complement(5523868..5524719) /locus_tag="PA4925" /db_xref="GeneID:878053" CDS complement(5523868..5524719) /locus_tag="PA4925" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253612.1" /db_xref="GeneID:878053" /translation="MDDTTIVNVGTEKINALWATVSQYAFAFGIKILAAIAFWVIGRW LIGFAVGMVQKSLERQKVDPTVLRYVGSFITVTLNVLLVVGILGFFGIQTTSLAALIA AVGLAIGMAWSGLLANLAAGGFIIVLRPFKVGDFICAGGVTGTVKEIGLFTTAINTPD NVLTMVGNNKIFGDNIQNFTHNPFRRVELKAQLSGAADYQAAIALLKQRVAAIPNVLG EPPVDVEILEFNLVGPVLAVRPYCHNDHYWQVYFDTNKVIKDALGADFPAPMPAQTVI VQQSAGA" misc_feature complement(5523877..5524680) /locus_tag="PA4925" /note="Small-conductance mechanosensitive channel [Cell wall/membrane/envelope biogenesis]; Region: MscS; COG0668" /db_xref="CDD:440432" gene complement(5524970..5525905) /locus_tag="PA4926" /db_xref="GeneID:878054" CDS complement(5524970..5525905) /locus_tag="PA4926" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253613.1" /db_xref="GeneID:878054" /translation="MSAPALRSVPLQGARYQVLHDTHYRYAMPVSLSRQLAHLWPREC AWQACHERALLIEPGPSRREDGHDAFGNPLSRLAFERPHEALRVSARLQVEVFAHAPA QLTASPAWETVAAGLAFSGRALSAAELEACRYRVESPYVRIQRRFAEFAADCFPPGRP LLVAAAALMEKIFREFAFDAQATQVATPLDEVLERRRGVCQDFAHLMLACLRARGLAA RYVSGYLLTRPPPGQARLIGADASHAWVSLYCPENGWVDFDPTNDLLPDLEHITLAWG RDFSDVSPLRGVILGGGSHDPEVRVTVLPLQETAG" misc_feature complement(5525621..5525860) /locus_tag="PA4926" /note="Bacterial transglutaminase-like N-terminal region; Region: Bact_transglu_N; pfam08379" /db_xref="CDD:462455" misc_feature complement(5525123..>5525470) /locus_tag="PA4926" /note="Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]; Region: YebA; COG1305" /db_xref="CDD:440916" gene complement(5525905..5528397) /locus_tag="PA4927" /db_xref="GeneID:879695" CDS complement(5525905..5528397) /locus_tag="PA4927" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253614.1" /db_xref="GeneID:879695" /translation="MPELLAHYPFTDTAYHELLDRQGGVRPHWQRLFRQLERSSPEQL RQRQALVERQIQENGVTYNVYADPKGTDRPWALDLLPNLLSAAEWQPIAAGVAQRARL LNALLADLYGDQRLLAEGLLPSELVFGHPNFLWPALGIRPPGGIFLHSYAVDLARDAD GRWQVLADRTQAPSGAGYALENRQIVSRALPELYRDLRVQHLAGYFRTLQETLASQAA GDGETPLVVLLTPGRFNETYFEHLYLARQLGFPLVEGHDLTVRDATLYLKTLGGLKRV HAVLRRLDDDFCDPLELRTDSALGIPGLLEAVRQGRVLVANALGSGVLESPGLLGFLP QACRRLLGEELALPSLDTRWCGEPQALEAILAALPDLVIKPAFPGQRCEPLFGHALDS AGLASLGERLRERPQAYVAQRLAQLSQAPVWRDGKAGVGLQSRAIGMRVFAVAASDGR YWVMPGGLTRVASAADAEVVSMQRGGASKDTWVLAERAVGGEPLRPRRLGVRDLVRED PYLPSRVVENLFWYGRYAERCDDHARLLRVVLSRYVDADGDEEALRSALALAGGIGLL PGDGEPLERCLLRALLDEHWPASLCANLRRLHWAAAQVRGRLSGENWLALLELQRDMQ ALDPARTDLGEALDFLNRLVMSLAALSGFALDDMTRDDGWRFLMIGRRIERVRFFAES IAAFLGSAWDAGALEWLLELGNSGITYRSRYLASPQLVPVLDLLLLHEQNPHSLRFQL QALERSLERLHEEFGAPRERELRTLGERLRSFDLAALESPLFGAAGLDEVLVGLARLL RDIAACAGQVSDRLGLRYFAHVDDVSQRTVST" misc_feature complement(5526064..5528388) /locus_tag="PA4927" /note="Circularly permuted ATP-grasp protein [General function prediction only]; Region: COG2308" /db_xref="CDD:441882" gene complement(5528659..5530902) /locus_tag="PA4928" /db_xref="GeneID:879696" CDS complement(5528659..5530902) /locus_tag="PA4928" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253615.1" /db_xref="GeneID:879696" /translation="MQAAKPLFDYPKYWAECFGPAPFLPMSREEMDQLGWDSCDIIIV TGDAYVDHPSFGMAIIGRLLEAQGFRVGIIAQPDWQSKDDFMKLGEPNLFFGVAAGNM DSMINRYTADKKVRSDDAYTPGGLAGKRPDRASLVYSQRCKEAYSHVPVILGGIEASL RRIAHYDYWQDKVRRSILMDATADILLYGNAERAVVEIAQRLAQGELVSAITDVRGTA FVRRDTPEGWFEIDSTRIDRPGKIDKIINPYVNTQDTAACAIEQEKGAQEDPQEAKVV QLLANPRLTREKTVIRLPSFEKVRNDPVLYAHANRVLHLETNPGNARALVQKHGEVDV WFNPPPIPMSTEEMDYVFGMPYARVPHPAYGKAKIPAYEMIRFSVNIMRGCFGGCTFC SITEHEGRIIQNRSHDSIIREIEEMRDKVPGFTGVVSDLGGPTANMYRIACKSPDIER HCRKPSCVFPGICENLDTDHSSLIELYRKARALPGVKKILIASGLRYDLAVESPEYVK ELVTHHVGGYLKIAPEHTERGPLDKMMKPGIGTYDRFKQMFEKFSKEAGKEQYLIPYF IAAHPGTTDEDMMNLALWLKRNGFRADQVQAFYPSPMATATAMYHSGKNPLRKVTYKS DGVTIVKSDQQRRLHKAFLRYHDPKGWPLLREALERMGRADLIGNGKHHLVPTYQPDT GEYQSARRKNSTPAGSKKAGKLLTQHTGLPPRASDGGKPWSKGQQNKATAFAKGKKKS RQPNIPR" misc_feature complement(5528971..5530836) /locus_tag="PA4928" /note="uncharacterized radical SAM protein YgiQ; Region: SAM_YgiQ; TIGR03904" /db_xref="CDD:274847" misc_feature complement(5528761..5529126) /locus_tag="PA4928" /note="Domain of unknown function (DUF3362); Region: DUF3362; pfam11842" /db_xref="CDD:432120" gene 5530973..5533015 /locus_tag="PA4929" /db_xref="GeneID:878645" CDS 5530973..5533015 /locus_tag="PA4929" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253616.1" /db_xref="GeneID:878645" /translation="MSNSDVFTGYCLSSAGLANCHHFATFFLYSIHRHLTRPPPEAPG RFIVRHPLALLAVIFLLLASAVSRAAPEFPAPPASGAWLNGSLDLLEDPDGNLAVEDL EQAEQAGRFVAAAGRTSVGLSRSAWWLRLDLPRREAVSGGWWLEVASASLHDLRLYLP DERGGFREHRSGEAVPFAEGRDHAYRHPLFRIPPGDGPLRVYLRSYDPGGNAFPLRLW SHDELLEYRSQGNLLFGMAYGLILALLLYNLFLFTSLRDRAYFWYVLTAASALVLTLS ISGHGFEYFWPERAVPWWLDRLALLAIWGICVIRFSQNLLQSRQHARWAHHLLNACCL LFLACLAFNAAGWRWQAAGVLALTLLANLPIAIGLAVQRWRQGSATARLYLVGFGLVL GSVSLGVMRATALVQPTSANAMVFPLALTLEALLFSLALASRIQDLKQERALALDQAD QEKNARLALLHSAQRDLARAVEVRTNELSEANRQLQMREAQLQYAAHHDPLTGLGNRR HLMEFAESALDDARRHGNSMALLLIDLDHFKPINDTHGHDAGDFVLQNVAQRLRHCVR TEDCVARLGGDEFAVLVGGSNAEQHARDIAERLLRELAKPVEFAKQWLVITPSIGVAL FPGDALQFGKLYKAADQALYRVKGAGRAGYAMAADDERETAPALPWPTALAPERIS" misc_feature 5531231..5531614 /locus_tag="PA4929" /note="7TMR-DISM extracellular 2; Region: 7TMR-DISMED2; pfam07696" /db_xref="CDD:429601" misc_feature 5531729..>5532967 /locus_tag="PA4929" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" protein_bind 5531025..5531037 /locus_tag="PA4929" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4929" /bound_moiety="AmrZ" protein_bind 5531036..5531048 /locus_tag="PA4929" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4929" /bound_moiety="AmrZ" gene complement(5533017..5534093) /gene="alr" /locus_tag="PA4930" /db_xref="GeneID:878646" CDS complement(5533017..5534093) /gene="alr" /locus_tag="PA4930" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="biosynthetic alanine racemase" /protein_id="NP_253617.1" /db_xref="GeneID:878646" /translation="MRPLVATVDLSAIRHNYALAKRCAPQRQAFAVVKANAYGHGARE VVTALHDDADGFAVACLEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQG AEQGEAFLAAGLDIPLNVWLKLDSGMHRLGFDPAALRAWHARLRSHPGVRELNLISHF ACADERNHPLTEQQLESFLGLLDLDFDQRSLANSAAVLTIPAAHMDWLRPGIMLYGST PLADLSAAELGLKPAMSLGAQLISLREVAVGESVGYGATWIAERPARIGTVSCGYADG YPRTAPAGTPVLVGGRRAILAGRVSMDMLAVDLSDLPEARVGDPVELWGAGLSVDEVA RACGTLGYELLSKVTARVPRRYSH" misc_feature complement(5533026..5534087) /gene="alr" /locus_tag="PA4930" /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases; Region: PLPDE_III_AR_proteobact; cd06827" /db_xref="CDD:143500" misc_feature complement(order(5533068..5533070,5533458..5533469, 5533509..5533517,5533617..5533619,5533623..5533625, 5533704..5533706,5533725..5533727,5533857..5533859, 5533980..5533982,5533992..5533994,5533998..5534000)) /gene="alr" /locus_tag="PA4930" /note="active site" /db_xref="CDD:143500" misc_feature complement(order(5533068..5533070,5533458..5533463, 5533467..5533469,5533512..5533517,5533617..5533619, 5533857..5533859,5533980..5533982,5533992..5533994, 5533998..5534000)) /gene="alr" /locus_tag="PA4930" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143500" misc_feature complement(order(5533068..5533070,5533617..5533619, 5533704..5533706,5533980..5533982,5533992..5533994)) /gene="alr" /locus_tag="PA4930" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:143500" misc_feature complement(order(5533332..5533334,5533992..5533994)) /gene="alr" /locus_tag="PA4930" /note="catalytic residues [active]" /db_xref="CDD:143500" misc_feature complement(order(5533041..5533043,5533050..5533052, 5533065..5533070,5533074..5533076,5533185..5533187, 5533191..5533193,5533257..5533259,5533275..5533277, 5533290..5533292,5533329..5533337,5533341..5533346, 5533362..5533364,5533371..5533373)) /gene="alr" /locus_tag="PA4930" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143500" gene complement(5534162..5535556) /gene="dnaB" /locus_tag="PA4931" /db_xref="GeneID:879625" CDS complement(5534162..5535556) /gene="dnaB" /locus_tag="PA4931" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="replicative DNA helicase" /protein_id="NP_253618.1" /db_xref="GeneID:879625" /translation="MNEITSPEQYDLETTALKVPPHSIEAEQAVLGGLMLDNNAWERV SDSVSDGDFYRHDHRLIFRAIYKLAEANQPIDVVTLSEQLEKEGQLAQVGGLAYLGEL AKNIPSVANIKAYAQIIRERATLRQLIGISNEIADSAFHPEGRGANEILDEAERKIFE VAEARPKTGGPVGISDILVKTIDRIDYLFNTTEALTGVSTGFTDLDEKTSGLQPADLI IVAGRPSMGKTTFAMNLVENAVMRTDKAVLVYSLEMPSDSIVMRMLSSLGRIDQTKVR SGKLDDEDWPRLTSAINLLNDKKLFIDDTAGISPSEMRARTRRLVREHGDLALIMIDY LQLMQIPGSSGDNRTNEISEISRSLKALAKEFNCPVIALSQLNRSLEQRPNKRPVNSD LRESGAIEQDADVIMFVYRDEVYHPETEFKGVAEIIIGKQRNGPIGTVRLAFIGKYTR FENLAAGMYNFEDE" misc_feature complement(5534177..5535526) /gene="dnaB" /locus_tag="PA4931" /note="replicative DNA helicase; Provisional; Region: PRK05748" /db_xref="CDD:180232" gene complement(5535685..5536131) /gene="rplI" /locus_tag="PA4932" /db_xref="GeneID:879626" CDS complement(5535685..5536131) /gene="rplI" /locus_tag="PA4932" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L9" /protein_id="NP_253619.1" /db_xref="GeneID:879626" /translation="MEVILLEKVANLGNLGDKVNIKGGYARNFLLPQGKATVATAENV AAFEARRAELEKAAAEKKAAAEARAAQLSELVVTLGAHAGDEGKLFGSIGTRDIAEAV SAAGYPLEKAEVRLPNGALRNTGEFDVAVHLHTDVETTLKLIIVAE" misc_feature complement(5535688..5536131) /gene="rplI" /locus_tag="PA4932" /note="Ribosomal protein L9 [Translation, ribosomal structure and biogenesis]; Region: RplI; COG0359" /db_xref="CDD:440128" gene complement(5536153..5537022) /locus_tag="PA4933" /db_xref="GeneID:878034" CDS complement(5536153..5537022) /locus_tag="PA4933" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253620.1" /db_xref="GeneID:878034" /translation="MRALAEFTMRGRMQATLAVAGSAVVPLLFWLSAAAGSLVLLRRG FGDAFGVLAWAVLPAMFWWYLGDPSILLVLLGTLTLAQILRASTSWSHVLLGSVAVGV VFALVLGHTSSELIGALATEVTKVLTQLRGESQLSGEELDKLQVALVPTLTGVMASSL QVTCLLCLMLARYWQASLYNPGGFGREFRSLRLAPAVAVILLLGAVVVPALEVQAAVL GPLCSVPLIIAGVALGHGLIALKRLAGGWLVGLYLAVLLLGNLICLLAVVDSLFDFRG RLARRQGSTNGEG" gene complement(5537059..5537289) /gene="rpsR" /locus_tag="PA4934" /db_xref="GeneID:878035" CDS complement(5537059..5537289) /gene="rpsR" /locus_tag="PA4934" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S18" /protein_id="NP_253621.1" /db_xref="GeneID:878035" /translation="MARFFRRRKFCRFTAEGVKEIDYKDLNTLKAYVSETGKIVPSRI TGTKAKYQRQLATAIKRARYLALLPYTDSHGR" misc_feature complement(5537068..>5537250) /gene="rpsR" /locus_tag="PA4934" /note="Ribosomal protein S18 [Translation, ribosomal structure and biogenesis]; Region: RpsR; COG0238" /db_xref="CDD:440008" gene complement(5537319..5537738) /gene="rpsF" /locus_tag="PA4935" /db_xref="GeneID:877646" CDS complement(5537319..5537738) /gene="rpsF" /locus_tag="PA4935" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S6" /protein_id="NP_253622.1" /db_xref="GeneID:877646" /translation="MRHYEIVFLVHPDQSEQVGGMVERYTKAIEEDGGKIHRLEDWGR RQLAYAINNVHKAHYVLMNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTEQSEM LKAEESRNERRERRERPNDNAEGADGDDNSDSDNADE" misc_feature complement(5537424..5537738) /gene="rpsF" /locus_tag="PA4935" /note="Ribosomal protein S6 [Translation, ribosomal structure and biogenesis]; Region: RpsF; COG0360" /db_xref="CDD:440129" gene complement(5537953..5538699) /locus_tag="PA4936" /db_xref="GeneID:877647" CDS complement(5537953..5538699) /locus_tag="PA4936" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB" /protein_id="NP_253623.1" /db_xref="GeneID:877647" /translation="MSQWEKVYGVHAVEALLRHHPKRVKQLWLAEGRHDPRVQVLTEL AAGFRIPVGQRDRRELDEWAEGVHQGVVAEVSPSQVWGENMLEELLERSEGVPLLLAL DGVTDPHNLGACLRTADAAGVQAVIVPKDKSATLNATVRKVACGAAEVIPLVAVTNLA RTLEKLQQRGLWVVGTAGEADKTLYQLDLKGPTVLVMGAEGKGMRRLTREHCDFLARL PMAGSVSSLNVSVATGVCLFEILRQRTPLE" misc_feature complement(5537968..5538687) /locus_tag="PA4936" /note="23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; Region: PRK11181" /db_xref="CDD:183021" gene complement(5538696..5541410) /gene="rnr" /locus_tag="PA4937" /db_xref="GeneID:879988" CDS complement(5538696..5541410) /gene="rnr" /locus_tag="PA4937" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="exoribonuclease R" /protein_id="NP_253624.1" /db_xref="GeneID:879988" /translation="MADWQNLDPEAAREAEKYENPIPSRELILAHLSERGAPATRSQL LDEFGLAGEEPEEALRRRLRAMERDGQLIYTRRGAYAPVDKLDLIRGRISGHRDGFGF LIPDDGSDDLFLSPTQMRLVFDGDRALARVSGHDRRGRREGQLVEVIERAHEIVVGRY FEESGIGVVVADNPKIQQEVLIPPGKAGKARHNQFVQVRIEQWPSIHRQAQGEIVEVL GDYMAPGMEIEVALRSYDIPHVWPAAVEKEAAKLKPEVAEKDKEKRVDLRQVPFVTID GEDARDFDDAVYAEAKRGGGWRLFVAIADVSHYVKVGSALDEEAARRGNSVYFPERVI PMLPEVLSNGLCSLNPLVDRLAMVCEMTLSKAGKLTGYQFYEAVIHSHARLTYTKVSQ LLEHPDSVEAENLRQQLPGVVPHLQQLYALYKALLAGRHVRGAIDFETQETRIVFGAD RKISEIRPTQRNDAHRLIEECMLCANVATARFLQKHAIPALYRVHDGPPQEKLNNLRQ FLGELGLSLGRGKAAPTPGDYQELLEKIHDRADFRLIQTVMLRSLSQAVYSPDNNGHF GLNYDAYTHFTSPIRRYPDLLVHRAIRSVIRSKAETPHVQRAGAASMPKARIYPYDEL RLDQLGEQCSMTERRADEATRDVTNWLKCEYMRERVGETFPGVITAVTGFGLFVELTD IFVEGLVHVTALPGDYYHFDAVHHRLSGERTGRSFRLGDTTEVVVARVDLDERKIDFE LAGNVLSAPIGRKKRNGDKSANAGKAPKGRKGASVPEVDLEPALASPDAAVVPRRKAG KVQALPPVAPELLAQAAEMLGNTDVRKSREVKQALLAEARVGGKDKGGKKGKVVPAGK SAKGKAKDGKPAAAAKPGKPTKHRKGPSKPKADNAPAATGARKRKAKS" misc_feature complement(5539164..5541359) /gene="rnr" /locus_tag="PA4937" /note="Exoribonuclease R [Transcription]; Region: VacB; COG0557" /db_xref="CDD:440323" gene 5541614..5541700 /locus_tag="PA4937.1" /db_xref="GeneID:3240223" tRNA 5541614..5541700 /locus_tag="PA4937.1" /product="tRNA-Leu" /db_xref="GeneID:3240223" gene 5541830..5541916 /locus_tag="PA4937.2" /db_xref="GeneID:3240222" tRNA 5541830..5541916 /locus_tag="PA4937.2" /product="tRNA-Leu" /db_xref="GeneID:3240222" gene complement(5542073..5543365) /gene="purA" /locus_tag="PA4938" /db_xref="GeneID:877657" CDS complement(5542073..5543365) /gene="purA" /locus_tag="PA4938" /EC_number="6.3.4.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="adenylosuccinate synthetase" /protein_id="NP_253625.1" /db_xref="GeneID:877657" /translation="MGKNVVVLGTQWGDEGKGKIVDLLTEQAAAVVRYQGGHNAGHTL VIDGEKTVLHLIPSGILREGVQCLIGNGVVLAPDALLREITKLEEKGVPVRERLRISP SCPLILSYHVALDQAREKARGEAKIGTTGRGIGPAYEDKVARRGLRVGDLFHRERFAA KLGELLDYHNFVLQHYYKEPAIDFQKTLDEAMEYAELLKPMMADVAATLHDLRKHGKD IMFEGAQGSLLDIDHGTYPYVTSSNTTAGGTATGSGFGPLYLDYVLGITKAYTTRVGS GPFPTELFDDVGAYLAKRGHEFGATTGRARRCGWFDAVILRRAIEINSISGLCLTKLD VLDGLDVVRLCVGYKNADGDVLEAPTDADSYIGLQPVYEEMPGWSESTVGAKTLEELP ANARAYIKRVEELVGAPIDIISTGPDRNETIILRHPFA" misc_feature complement(5542076..5543362) /gene="purA" /locus_tag="PA4938" /note="adenylosuccinate synthetase; Provisional; Region: PRK01117" /db_xref="CDD:234904" misc_feature complement(order(5542115..5542126,5542361..5542366, 5542370..5542372,5542448..5542450,5542454..5542456, 5542460..5542471,5542541..5542546,5542646..5542651, 5542679..5542681,5542691..5542696,5542976..5542984, 5543237..5543251,5543309..5543332)) /gene="purA" /locus_tag="PA4938" /note="active site" /db_xref="CDD:349762" misc_feature complement(order(5542394..5542405,5542412..5542414, 5542601..5542606,5542613..5542618,5542622..5542627, 5542643..5542645,5542649..5542651,5542655..5542660, 5542664..5542675,5542736..5542738,5542745..5542750, 5542922..5542924,5542928..5542954,5542961..5542963, 5542985..5542987,5543012..5543014,5543051..5543053, 5543057..5543059,5543153..5543155)) /gene="purA" /locus_tag="PA4938" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:349762" gene complement(5543417..5544601) /locus_tag="PA4939" /db_xref="GeneID:877658" CDS complement(5543417..5544601) /locus_tag="PA4939" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="ATP phosphoribosyltransferase" /protein_id="NP_253626.1" /db_xref="GeneID:877658" /translation="MATVDRWLLPDGIEEVLPPEAARIEAARRQVLDLFHRWGYEFVV TPHIEYLESLLTGAGQDLDLRTFKVTDPASGRLMGFRADITPQVARMDAHSLRREGPS RLCYAGSVLHAQPRALSTSRSPIQLGAELYGDPSPASDVEVISLMLEMLEMAEVPDVH MDLGHVGIYRGLARAAGLSGEVEQQLFDALQRKAVDEVEALTADLPAELRGMLRALAE LCGGRDALEQGRARLAAAPADVQVALNELIEIADSLAGRFPGLPLYFDLGELRGYHYH TGVVFAAFVPGVGQSIAQGGRYDDIGADFGRARPATGFSTDLKSLVTLGQARLDQAVS GIWAPAEGAGLWQAVQRLRRDGQRVVQALPGQDAASAREAGCDRQLALRDGNWQVAPL AS" misc_feature complement(5543426..5544589) /locus_tag="PA4939" /note="ATP phosphoribosyltransferase regulatory subunit; Provisional; Region: PRK12421" /db_xref="CDD:237098" gene complement(5544636..5544821) /locus_tag="PA4940" /db_xref="GeneID:878720" CDS complement(5544636..5544821) /locus_tag="PA4940" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253627.1" /db_xref="GeneID:878720" /translation="MWQEFGIAFCLVLVLEGILPFLCPRQWREAVTGIGRLSDRHLRL VGLGSMLLGTLLLYWIH" misc_feature complement(5544639..5544821) /locus_tag="PA4940" /note="Uncharacterized conserved protein YjeT, DUF2065 family [Function unknown]; Region: yjeT; COG3242" /db_xref="CDD:442474" gene complement(5544917..5545786) /gene="hflC" /locus_tag="PA4941" /db_xref="GeneID:878721" CDS complement(5544917..5545786) /gene="hflC" /locus_tag="PA4941" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="protease subunit HflC" /protein_id="NP_253628.1" /db_xref="GeneID:878721" /translation="MGNKSLIALIVGVVAAIVLWNSVYVVQQTERAVMLRFGRVVESD VKPGLHFKIPYVNQVRKFDARLLTLDAPTQRFLTLEKKAVMVDAYAKWRVADAERFYT ATSGLKQIADERLSRRLEAGLRDQFGKRTLHEVVSGERDALMGDITASLNRMAQKELG IEVIDVRVKAIDLPKEVNRSVFERMSTEREREAREHRAKGRELAEGIRADADRQRRVI VAEAYRESEETRGDGDSKAAAIYAKAYNQDPEFYSFYRSLKAYRESFAEKRDVLVLDP SSEFFRYLNKANK" misc_feature complement(5544971..5545723) /gene="hflC" /locus_tag="PA4941" /note="High frequency of lysogenization C (HflC) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; Region: SPFH_HflC; cd03405" /db_xref="CDD:259803" gene complement(5545786..5546988) /gene="hflK" /locus_tag="PA4942" /db_xref="GeneID:877755" CDS complement(5545786..5546988) /gene="hflK" /locus_tag="PA4942" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="protease subunit HflK" /protein_id="NP_253629.1" /db_xref="GeneID:877755" /translation="MAWNEPGDNSNNNDRDPWGGRRGGGGGGGDRKGPPDLDEAFRKL QDSLNGLFGGKKRSGNGSGSGSGGKGGGLGLFGIGLAILAVLWLYNAIYVVDEQEQAV ILRFGKYYETVGPGLNFYFPPIDKRFQENVTRERAYSKQGQMLTEDENIVEVPLTVQY KISNLQDFVLNVDQPEVSLQQATESALRHVAGSTTMDRILTEGREQMATEVRERLQRF LDTYRTGITVTQVNIQSAQAPREVQEAFDDVIRAREDEQREKNQAEAYANGVVPEARG QAQRIIEEANGYRDEVISRAQGEADRFSKLLVEYRKAPEVTRERLYLDTMQEVFSQTS KVLVTGQQGQNNLLYLPLDKMIDGRNAAPATGAGASAGGGSASASDLGSRIVNDLRQQ DARTRESR" misc_feature complement(5546824..5546985) /gene="hflK" /locus_tag="PA4942" /note="Bacterial membrane protein N terminal; Region: HflK_N; pfam12221" /db_xref="CDD:463497" misc_feature complement(5545930..5546715) /gene="hflK" /locus_tag="PA4942" /note="HflK protein; Region: hflK; TIGR01933" /db_xref="CDD:130988" gene complement(5547083..5548384) /locus_tag="PA4943" /db_xref="GeneID:877756" CDS complement(5547083..5548384) /locus_tag="PA4943" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="GTP-binding protein" /protein_id="NP_253630.1" /db_xref="GeneID:877756" /translation="MFFERPGGGEQAVLVHLEGQNPEAREDPQEFQELVRSAGAETVA FVSVSRHQPSAKYLIGSGKVEELHDLVKAENVELVIFNHTLTPSQERNLERAFECRVL DRTGLILDIFAQRARTHEGKLQVELAQLEHMSTRLVRGWTHLERQKGGIGLRGPGETQ LETDRRLLRVRIRQIKQRLEKVRSQREQARRGRKRADIPAVSLVGYTNAGKSTLFNSL TASEVYAANQLFATLDPTLRRLQLDDLGPVVLADTVGFIRHLPHKLVEAFRATLEESS NADLLLHVIDAYEPERDAQVEQVLAVLGEIGANELPMLEVYNKVDLLPSVEPHIQRDD SGKPVRVWLSAQTGEGLDLLRQAIAELLGEDLFVGTLRLPQRLGRLRAQLFELGAVQS EAHDEEGCTLLQVRLPRAELNRLASRAGWQPAEFVAQHTLQ" misc_feature complement(5547125..5548378) /locus_tag="PA4943" /note="50S ribosomal subunit-associated GTPase HflX [Translation, ribosomal structure and biogenesis]; Region: HflX; COG2262" /db_xref="CDD:441863" gene complement(5548397..5548645) /gene="hfq" /locus_tag="PA4944" /db_xref="GeneID:878015" CDS complement(5548397..5548645) /gene="hfq" /locus_tag="PA4944" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="RNA-binding protein Hfq" /protein_id="NP_253631.1" /db_xref="GeneID:878015" /translation="MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVI LLKNTVSQMVYKHAISTVVPSRPVRLPSGDQPAEPGNA" misc_feature complement(5548412..5548645) /gene="hfq" /locus_tag="PA4944" /note="RNA-binding protein Hfq; Provisional; Region: hfq; PRK00395" /db_xref="CDD:179001" misc_feature complement(order(5548454..5548498,5548517..5548522, 5548526..5548534,5548556..5548570,5548613..5548615, 5548622..5548630)) /gene="hfq" /locus_tag="PA4944" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:212463" misc_feature complement(order(5548505..5548558,5548562..5548582)) /gene="hfq" /locus_tag="PA4944" /note="Sm1 motif; other site" /db_xref="CDD:212463" misc_feature complement(order(5548457..5548459,5548463..5548468, 5548490..5548492,5548508..5548510,5548547..5548561, 5548571..5548573)) /gene="hfq" /locus_tag="PA4944" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:212463" misc_feature complement(5548460..5548495) /gene="hfq" /locus_tag="PA4944" /note="Sm2 motif; other site" /db_xref="CDD:212463" gene complement(5548751..5549722) /gene="miaA" /locus_tag="PA4945" /db_xref="GeneID:878016" CDS complement(5548751..5549722) /gene="miaA" /locus_tag="PA4945" /EC_number="2.5.1.75" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tRNA delta(2)-isopentenylpyrophosphate transferase" /protein_id="NP_253632.1" /db_xref="GeneID:878016" /translation="MSSLPPAIFLMGPTAAGKTDLAMALADALPCELISVDSALIYRG MDIGTAKPSRELLARYPHRLIDIRDPAESYSAAEFRADALAAMAKATARGRIPLLVGG TMLYYKALLEGLADMPGADPEVRAAIEAEAQAEGWEALHRQLAEVDPESAARIHPNDP QRLMRALEVYRLGGVSMSDLRRRQSAEKADFDASGRNQLPYTVAQLAIAPEQRQVLHA RIAQRFRQMLEQGFIAEVEALHARSDLHAGLPSIRAVGYRQVWDYLDGKLSYAEMTER GIIATRQLAKRQFTWLRSWSHLHWMDSLAGDNLPRALKYLKTVSILA" misc_feature complement(5548769..5549710) /gene="miaA" /locus_tag="PA4945" /note="tRNA A37 N6-isopentenylltransferase MiaA [Translation, ribosomal structure and biogenesis]; Region: MiaA; COG0324" /db_xref="CDD:440093" gene complement(5549780..5551681) /gene="mutL" /locus_tag="PA4946" /db_xref="GeneID:878468" CDS complement(5549780..5551681) /gene="mutL" /locus_tag="PA4946" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA mismatch repair protein" /protein_id="NP_253633.1" /db_xref="GeneID:878468" /translation="MSEAPRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGSR RIDVEVEQGGIKLLRVRDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEA LASISSVARLTMTSRTADAGEAWQVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPA RRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGA VCGQAFLEQALPIEVERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVR QAYRDVLYNGRHPTFVLFFEVDPAVVDVNVHPTKHEVRFRDSRMVHDFLYGTLHRALG EVRPDDQLAPPGATSLTEPRPTGAAAGEFGPQGEMRLAESVLESPAARVGWSGGSSAS GGSSGYSAYTRPEAPPSLAEAGGAYKAYFAPLPAGEAPAALPESAQDIPPLGYALAQL KGIYILAENAHGLVLVDMHAAHERITYERLKVAMASEGLRGQPLLVPESIAVSEREAD CAEEHSSWFQRLGFELQRLGPESLAIRQIPALLKQAEATQLVRDVIADLLEYGTSDRI QAHLNELLGTMACHGAVRANRRLTLPEMNALLRDMEITERSGQCNHGRPTWTQLGLDE LDKLFLRGR" misc_feature complement(5549786..5551669) /gene="mutL" /locus_tag="PA4946" /note="DNA mismatch repair endonuclease MutL; Region: mutL; PRK00095" /db_xref="CDD:234630" gene complement(5551681..5553108) /gene="amiB" /locus_tag="PA4947" /db_xref="GeneID:878469" CDS complement(5551681..5553108) /gene="amiB" /locus_tag="PA4947" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase" /protein_id="NP_253634.1" /db_xref="GeneID:878469" /translation="MGWGLRLRTLLTGVMILLACQVGEVLAAAQIKSVRIWRAPDNTR LVFDLSGPVQHSLFTLAAPNRIVIDVSGAQLATQLNGLKLGNTPITAVRSAQRTPNDL RMVLDLSAQVTPKSFVLPPNQQYGNRLVVDLYDQGADLTPDVPATPTPSVPVTPVTPT QPVAKLPLPTKGGTRDIVIAIDAGHGGEDPGALGPGGLHEKNITLSIARELQRQINQV RGYRAELTRTGDYFIPLRKRTEIARKKGADLFVSIHADAAPSRSAFGASVFALSDRGA TSETARWLADSENRSDLIGGDGSVSLGDKDQMLAGVLLDLSMTATLSSSLDVGHKVLT NVGRITSLHKRRVEQAGFMVLKSPDIPSILVETGFISNVNESRKLASASHQQALARSI TSGIRQYFQQSPPPGTYIASLRAQGKLSMGPREHVVRPGETLAMIAQRYEVSMAALRS SNSLSSDNLKVGQALSIPSTALAAQ" misc_feature complement(5551909..5553087) /gene="amiB" /locus_tag="PA4947" /note="N-acetylmuramoyl-L-alanine amidase AmiC; Region: amidase_AmiC; NF038267" /db_xref="CDD:468440" misc_feature complement(5551699..>5552049) /gene="amiB" /locus_tag="PA4947" /note="LysM repeat [Cell wall/membrane/envelope biogenesis]; Region: LysM; COG1388" /db_xref="CDD:440998" gene complement(5553117..5553584) /locus_tag="PA4948" /db_xref="GeneID:878066" CDS complement(5553117..5553584) /locus_tag="PA4948" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253635.1" /db_xref="GeneID:878066" /translation="MSEVILSAEGEDAMLELGGRIARASGGQGVIYLHGDLGAGKTTL SRGILRGLGHAGSVKSPTFTLVEPYEIGELRAYHFDLYRLADAEELEFFGIRDYFDGS ALCLIEWPERGAGVLPTADLDITITAQAGGRTLRLVPHGARGEAWCATLTMGA" misc_feature complement(5553129..5553554) /locus_tag="PA4948" /note="tRNA A37 threonylcarbamoyladenosine biosynthesis protein TsaE [Translation, ribosomal structure and biogenesis]; Region: TsaE; COG0802" /db_xref="CDD:440565" gene complement(5553572..5555080) /locus_tag="PA4949" /db_xref="GeneID:878067" CDS complement(5553572..5555080) /locus_tag="PA4949" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253636.1" /db_xref="GeneID:878067" /translation="MTMTFQHDDLPLALYSAAQVRDLDARLIAAGTPGFELMQRAAHA AWRALRRRWPEAAALTVLAGHGNNAGDGYLIAALAQRAGWRVRVLAVAAPQRLAGDAA QAHAAALATGVVVEPWSECAVLEGVVVDALLGTGLAGAVREPFAQAIRLANAADLPVL AVDIPSGLSADTGAVLGEAIRADLTVTFIGLKIGLFTGEAPARVGELVFDELGSDAVV LQGLQPRAHRLARNALPSLAARPRTAHKGLFGHLLVVGGDTGMGGAVLLAAESALRCG AGLVSAATRVEHVPALLSRCPEVMAHGVASANQLLALAERASVLVLGPGLGQRAWGRS LLSAVRSRPLPQVWDADALNLLALEPVGAGPRTWILTPHPGEAARLLGRSTAEVQADR PAAALELARRYQAVVVLKGAGSLVAAPDGRLAVCSQGHPAMAGAGLGDVLSGITGALL AQRVEAFEAACLAVWLHAAAGERLGAQGRGLAATDLIPTVRQLLEECSPCLK" misc_feature complement(5553605..5555077) /locus_tag="PA4949" /note="putative carbohydrate kinase; Provisional; Region: PRK10565" /db_xref="CDD:182554" gene 5555162..5556247 /locus_tag="PA4950" /db_xref="GeneID:878204" CDS 5555162..5556247 /locus_tag="PA4950" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253637.1" /db_xref="GeneID:878204" /translation="MTPQPLADNLSPPDPARLAQSIKDWGRELGFQQVGISDVELGEH EAHLQRWLEAGYHGEMDYMAAHGSKRSRPAELVPGTLRVISLRMDYLPGDTRMAQVLA TPEKAYVSRYALGRDYHKLIRKRLQQLAERIQAEVGPFGFRAFVDSAPVLEKAIAEQA GLGWIGKNTLVLNRKAGSYFFLGELFVDMPLPVDPAMDSEHCGRCSACLDICPTAAFV GPYRLDARRCISYLTIEYKGAIPLELRPLIGNRVFGCDDCQIVCPWNRFARPTGQGDF QPRHSLDNAELAELFLWSEEEFLGRTEGSPLRRAGYERWLRNLAVGLGNAPSTIPVLE ALKARRGFPSELVREHVEWALRRHGET" misc_feature 5555225..5556235 /locus_tag="PA4950" /note="epoxyqueuosine reductase; Region: TIGR00276" /db_xref="CDD:272993" gene complement(5556281..5556823) /gene="orn" /locus_tag="PA4951" /db_xref="GeneID:878205" CDS complement(5556281..5556823) /gene="orn" /locus_tag="PA4951" /EC_number="3.1.-.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="oligoribonuclease" /protein_id="NP_253638.1" /db_xref="GeneID:878205" /translation="MQNPQNLIWIDLEMTGLDPDRDVIIEMATIVTDSDLNTLAEGPV IAIHQPEEILAGMDEWNTRQHGQSGLTQRVRESTVSMAEAEAQTLAFLEQWVPKRSSP ICGNSICQDRRFLYRHMPRLEGYFHYRNLDVSTLKELAARWAPQVRESFKKGNTHLAL DDIRESIAELRHYRDHFIKL" misc_feature complement(5556284..5556817) /gene="orn" /locus_tag="PA4951" /note="oligoribonuclease; Provisional; Region: PRK05359" /db_xref="CDD:235429" misc_feature complement(order(5556338..5556340,5556353..5556355, 5556491..5556499,5556503..5556508,5556776..5556778, 5556782..5556793)) /gene="orn" /locus_tag="PA4951" /note="putative active site [active]" /db_xref="CDD:99838" misc_feature complement(order(5556338..5556340,5556353..5556355, 5556494..5556499,5556503..5556508,5556776..5556778, 5556782..5556793)) /gene="orn" /locus_tag="PA4951" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:99838" misc_feature complement(order(5556338..5556340,5556353..5556355, 5556491..5556493,5556785..5556787,5556791..5556793)) /gene="orn" /locus_tag="PA4951" /note="catalytic site [active]" /db_xref="CDD:99838" misc_feature complement(order(5556290..5556295,5556299..5556301, 5556392..5556397,5556410..5556412,5556419..5556421, 5556428..5556430,5556434..5556439,5556476..5556478, 5556485..5556487,5556494..5556499,5556722..5556724)) /gene="orn" /locus_tag="PA4951" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:99838" protein_bind complement(5556933..5556945) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 5556935..5557954 /locus_tag="PA4952" /db_xref="GeneID:878216" CDS 5556935..5557954 /locus_tag="PA4952" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="ribosome-associated GTPase" /protein_id="NP_253639.1" /db_xref="GeneID:878216" /translation="MAKRHLTRRQSWRIEKIQEERAARAARRESRAVEELEGGDLGPE QTGQVIAHFGVQVEVESADGQVSRCHLRANLPALVTGDQVVWRAGNQGIGVIVAQLPR RSELCRPDMRGLLKPVAANVDRIVIVFAPRPEPHANLIDRYLIAAEHAGIQPLLLLNK ADLVDESNAEGIDALLNVYRTLGYPLIEVSAFNGLAMDELRGALDGHVSVFVGQSGVG KSSLVNALLPGVDTRVGDLSTVTGKGTHTTTTARLFHFPGGGDLIDSPGIREFGLGHV SRDDVEAGFIEFRDLLGHCRFRDCKHDREPGCALLQALEDGRIMPQRMASYRHILASM PETDY" misc_feature 5556935..5557945 /locus_tag="PA4952" /note="small ribosomal subunit biogenesis GTPase RsgA; Region: PRK12288" /db_xref="CDD:237039" gene complement(5557958..5559001) /gene="motB" /locus_tag="PA4953" /db_xref="GeneID:878217" CDS complement(5557958..5559001) /gene="motB" /locus_tag="PA4953" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar motor protein MotB" /protein_id="NP_253640.1" /db_xref="GeneID:878217" /translation="MDNNQPIIVKRVKRYAAGHHGGSWKIAFADFATAMMAFFLVLWL LSSATPEQKKAISGYFQDPIGFSESASPYVIDLGGTPTPAPDKTLNPQVQAQPDSNES RISPEQDHQVNADQAENLAEQVERERLALLLQELQNKVDENPMLKDFKDQIHFEITRD GLRIQIVDAANRPMFDLGSARLQPYFEDILLAMAETIRQVPNKISISGHTDAKPYAGN GDFGNWELSANRANAARRALVAGGYPEGQIAQVVGYASARLFDDKDPLNPVNRRIDIV VLTRKAQKAIEGETGAPEASAPAAAPGEQPKPAAEAPAAGAQPSLPADEVQKKLNLFD DGGSLKLEQIKGD" misc_feature complement(5558129..5559001) /gene="motB" /locus_tag="PA4953" /note="motility protein MotB; Region: motB; PRK09041" /db_xref="CDD:236365" gene complement(5559021..5559872) /gene="motA" /locus_tag="PA4954" /db_xref="GeneID:879861" CDS complement(5559021..5559872) /gene="motA" /locus_tag="PA4954" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="flagellar motor protein MotA" /protein_id="NP_253641.1" /db_xref="GeneID:879861" /translation="MSKIIGIIVVFASVLGGFLLSGGKIGAIIQPFEVLIIGGAALGA FLQSNPGSTFMVVLKKAPKMFSNRFTQTYYLEVLGMLYEILNKSRREGMMAIEADIED PAASPIFSKYPGVLKDERMTAYVCDYLRIMSSGNMAPHELEGLFDMELSSLKEDLEHP SHAVTKVADALPGFGIVAAVLGIVITMALLGEGSQAEIGHHVAAALVGTFLGILAAYG FVGPLAGALEHDAKEELNLFEAIKACLVASASGMPPSLAVEFGRKVLLPAHRPTFAEL EQAVRGR" misc_feature complement(5559024..5559872) /gene="motA" /locus_tag="PA4954" /note="flagellar motor stator protein MotA; Region: PRK09110" /db_xref="CDD:181655" gene 5560013..5561524 /locus_tag="PA4955" /db_xref="GeneID:879862" CDS 5560013..5561524 /locus_tag="PA4955" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253642.1" /db_xref="GeneID:879862" /translation="MTDRLAAWLEELDRQPLPIPASHYAGLHAALSDSRRSLREIADQ LQGSPTLALSILREANRAESARDNPAESLEVALSRLGLGRASQLLKTLPSIQDAEMPR VLGQMLLISQHAMQQASGLFGARLARLWQEIHWGSLLTMAPVWALANARPQLLEQWQQ RVLVQGEPTLRVERELLGMRLLPICLALAERWRLPQWVIQGYRLLACDRRLLVRALRI ARDHQSPLLQQQQLDAQPDLARWLTQPANCTLLANGLAIAAHQSWDGPHMLRWQRLTG LYLGQPLTEVQQQVHMLAAQSARLHARPPLWHPAVALIWPWQASRWRAEAAPPPPPSA EALAEWRQHCAELLREPSPFSNVVQLTACARDALRACGLQRMLLLVADRTQVHVLAQQ SAGLEPGQEKLQLEIASSPLLKKLFQQPALLRIGPNNQDQLLPALGEPLRQLFPGPHL LLRSLGNGSRVVMLVLADLGGQPFSDLHAQAFAKTAQCTERAIQQFGRQRRTE" misc_feature <5560049..5561461 /locus_tag="PA4955" /note="Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]; Region: PksD; COG3321" /db_xref="CDD:442550" misc_feature 5560091..>5560600 /locus_tag="PA4955" /note="HD-like signal output (HDOD) domain, no enzymatic activity [Signal transduction mechanisms]; Region: HDOD; COG1639" /db_xref="CDD:441246" gene 5561599..5562414 /gene="rhdA" /locus_tag="PA4956" /db_xref="GeneID:879172" CDS 5561599..5562414 /gene="rhdA" /locus_tag="PA4956" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="thiosulfate:cyanide sulfurtransferase" /protein_id="NP_253643.1" /db_xref="GeneID:879172" /translation="MSVFSDLPLVIEPSDLAPRLGAPELILVDLTSAARYAEGHIPGA RFVDPKRTQWGQPPAPGLLPAKADLEALFGELGHRPEATYVVYDDEGGGWAGRFIWLL DVIGHHHYHYLNGGLPAWIADAQALDREVPAPVGGPLPLTLHDEPSATREYLQSRLGA ADLAVWDARNPSEYAGTKVLAAKAGHVPGAINFEWTAGMDPARALRIRADIAEVLEDL GITPDKEVITHCQTHHRSGFTYLVAKALGYPRVKGYAGSWSEWGNHPDTPVEV" misc_feature 5561599..>5562411 /gene="rhdA" /locus_tag="PA4956" /note="bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional; Region: PRK09629" /db_xref="CDD:104071" gene 5562418..5563287 /gene="psd" /locus_tag="PA4957" /db_xref="GeneID:879173" CDS 5562418..5563287 /gene="psd" /locus_tag="PA4957" /EC_number="4.1.1.65" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphatidylserine decarboxylase" /protein_id="NP_253644.1" /db_xref="GeneID:879173" /translation="MSFKDRLFICSQYLLPHHLLSRLIGFAADCRATWFKDRLIAWFA RRYQVDMREAQVEDLQAFEHFNAFFTRALKDGARPLAQEPGAVLCPADGAISQLGPIE HGRIFQAKGHSYSLAELLGGDAELAAPFMGGDFATVYLSPRDYHRVHMPLAGTLREMV YVPGRLFSVNQTTAENVPELFARNERVVCLFDTERGPMAVVLVGAMIVASIETVWAGL VTPPKRELKTFRYDEAARAPIRLEKGAELGRFKLGSTAIVLFGPQQVAFNDGLGAASP VRMGECLALPKQS" misc_feature 5562424..5563281 /gene="psd" /locus_tag="PA4957" /note="phosphatidylserine decarboxylase; Reviewed; Region: psd; PRK00044" /db_xref="CDD:234591" gene 5563605..5565428 /gene="fimW" /locus_tag="PA4958" /db_xref="GeneID:878415" CDS 5563605..5565428 /gene="fimW" /locus_tag="PA4958" /experiment="DESCRIPTION:Functional annotation[PMID:30581112]" /note="class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="cyclic-di-GMP receptor FimW" /protein_id="NP_253645.2" /db_xref="GeneID:878415" /translation="MENQSPHLSLRVPTPTQQNLSFCDATPKDIKYWLAHLPKANLGE TARQLYQGLIELNQLVLPVEARLQLLELFRPEVHFVCAHLERHFLNQAIVLDERPRKI ANLCQALQNHLAIGYKLIVVQEAPRNSRDRAQLFAVGIQRAIRSLCGPLIRASQLYCP VPEGLWLELHQLYQLASQRGVHRLAVRDELAKHTPGLSVEQAYLIPLLLGCARCNQMR QNNIARLAEVLEPWSQLLSIQSATLPGSLFIAVPQIDGPPRYRSLYPETQLASALGID TQPLVELIREYLLQPEAERAKARLPLIEGVTLDLLQHLSSAWGDIAERTFQRTQGQGQ LTLCIGMSALHYFLAGRRPFNEVLQIQEAPEAPRFKADVQDAWAGAFDAQKVTDWQPG MPLEEIEYRPHQSPRSVQPGHPQAHAQADATEDYPTYALPIVNHSPGGYCLSWPKEVP AQLQAGELVGLQDLPGQAWSIAVVRWIRQVRNGGTQMGIEMIAPAAQPCGLQLLRKTE QSSHYLRALLLPAIAAISRPATVITPRLPFQEGSRVQINLHGEERRAVLNRRQASTGS FSQFEYRSAEPVNTPSDKPVTAPVARPPAGEEDFDSLWKSL" gene 5565493..5567568 /gene="fimX" /locus_tag="PA4959" /db_xref="GeneID:878416" CDS 5565493..5567568 /gene="fimX" /locus_tag="PA4959" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein FimX" /protein_id="NP_253646.1" /db_xref="GeneID:878416" /translation="MAIEKKTIRLLILEDSQNEAERLVSLFRNAGHATRVHRLTSPED LAETLQQSWDLLIAAPTSECLEPGEALATLRRQSRDIPFIQLVADNSSDAITDALMLG AQDALPQGEDERLVLVANRELAGLAERRARRAAELALREAEKRCQLLLDSSVDAITYV HDGMHIYANRSYMALFGYEDAEELEGLPVIDLIASCDQGAFKDFLKGYQNDQRQTELV CTGVKLDGQEFKARISLSAATYDGEPCIQVVIRGEVDNAELEEKLREVSSQDPVTGLY NRSHFLDLMDAAVQQAVTARKPSTLAYIHLNGYPSLQADHGLSGIDLLLGQLAGLMRE QFGEEADLARFGDSIFAALFKGKTPEQAQAALQRLLKKVENHLFELNGRSAQATLSIG VAGLDEKTAKAQDVMNRAHRCADDAARKGGSQIKQYNPAEELAAAAQRGDVIAILQQA LETNSFRLLFQPVISLRGDSHENYEVLLRLLNPQGQEVPPAEFLHAAKEAGLAEKIDR WVILNSIKLLAEHRAKGHQTKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQI SEADATSYLKQAKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQD LNQVENQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQAM DYDFSSGDE" misc_feature 5565517..>5565816 /gene="fimX" /locus_tag="PA4959" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" misc_feature 5565832..5567544 /gene="fimX" /locus_tag="PA4959" /note="EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) [Signal transduction mechanisms]; Region: EAL; COG2200" /db_xref="CDD:441802" gene complement(5567655..5568944) /locus_tag="PA4960" /db_xref="GeneID:878558" CDS complement(5567655..5568944) /locus_tag="PA4960" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phosphoserine phosphatase" /protein_id="NP_253647.1" /db_xref="GeneID:878558" /translation="MPGSASLGCAGKRVEWRLLPGGAYALREIVLINITGEDRPGLTA AITGVLAQGGVNILDIGQAVIHDTLSFGILVEIPDTEAGSSVLKDVLFTAYKLDQQVR FTPVSEEDYRQWVDGQGKARHIVTLLTRRVTAEQLQRVSSITAKYALNIDHIDRLSGR MPLDMPADQGKGCIEFSVRGEPADPAALRAEFLSVAQELNVDIAFQQDSVFRRNRRLA VFDMDSTLIEAEVIDELAKAAGVGEKVAAITERAMRGELDFRASFKERLALLQGLSED VLEEIGASLRLTEGAETLFAELKRLGYKTAILSGGFTYFARQLQAKLGIDYVFANELQ IVDGKVTGVAVEPIVDAQRKADLLRELAAKEGLSLEQTIAVGDGANDLPMLGLAGLGV AFRAKPLVKQSAKQAISTLGLDGILYLLGYRDREGRA" misc_feature complement(5568237..5568866) /locus_tag="PA4960" /note="ACT domain, binds amino acids and other small ligands [Signal transduction mechanisms]; Region: ACT; COG3830" /db_xref="CDD:443042" misc_feature complement(5567757..5568296) /locus_tag="PA4960" /note="phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p; Region: HAD_PSP; cd07500" /db_xref="CDD:319803" misc_feature complement(order(5567802..5567807,5567814..5567819, 5567883..5567885,5568012..5568020,5568270..5568284)) /locus_tag="PA4960" /note="active site" /db_xref="CDD:319803" gene 5569090..5570628 /locus_tag="PA4961" /db_xref="GeneID:878559" CDS 5569090..5570628 /locus_tag="PA4961" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253648.1" /db_xref="GeneID:878559" /translation="MTRPTSVKPDNFFLLLFRALRQRRVPIALRLASHSLILVALALL IYAWVMGMQFRQAMQQQADALGQSLITQTAASATELLVSNDILSLNVLLNNLVKNPLV AHAAIYSVDQRILAEAGSRPKQSLLGATEGLYSTPITFQEVIAGHLRISLDMQQFQQP MMISLQSMGLISLILLILALYFSLRLGRQISTPLLQLRVWLRDPDNPAPGAELQNELG DLARDLEERLVPEKPPAPEPEEAPLPQNFDDILLEDDEADLRSRKVEASAFEEDDIPL GDALLDETKPVEFTSIDEDPLDQDAFDENGAEAGEQPAAPAAAREPQHSAVLAIQLGA QEQLRRLPRSRLVDLLQRYRDCLEQAARQYKGSLHTLSDGGSLILFHSRDNRADYLTN ALCCGELMRALGHALQIEVADSGITLQLQLGLSLGEDLSEQTQADLLLNETVQNALAL NQHSRNLLLVERSIADDAVVRERARIRAIASPEGACCVERLLEPYPSMLERQLARMHD RARP" misc_feature 5569225..>5569566 /locus_tag="PA4961" /note="Bacterial virulence factor haemolysin; Region: SMP_2; cl11479" /db_xref="CDD:472199" gene 5570625..5571161 /locus_tag="PA4962" /db_xref="GeneID:879930" CDS 5570625..5571161 /locus_tag="PA4962" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253649.1" /db_xref="GeneID:879930" /translation="MTTLITHPLPVLAVGLALGSRVIPPHLLLAGMLAACLPDFDVVA FKLGIAYHDAFGHRGFSHSLLFASILGALAALACRPLHSGPLKAGLWVALATASHSLL DAMTNGGLGVAWFWPWSDARYFMPFHPIAVSPIGLSRFLSERGLLVLQSEARWVWLPC LLLALAGMALRFLLRRSR" misc_feature 5570625..5571014 /locus_tag="PA4962" /note="Membrane-bound metal-dependent hydrolase YbcI, DUF457 family [General function prediction only]; Region: YbcI; COG1988" /db_xref="CDD:441591" gene complement(5571219..5571929) /locus_tag="PA4963" /db_xref="GeneID:879931" CDS complement(5571219..5571929) /locus_tag="PA4963" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253650.1" /db_xref="GeneID:879931" /translation="MSAWRVFACLSLVSLLGLTGCAVHPPAQLYQLDVGAAAVPKKDG GAAVLLGPVQLADYLKRDVMVQRQADGILSLSTDARWAGNLETNVSQQLLRQMSSELG SSRLALFPEKPGFTPQVQVMLTISRLDSGPKQPAVIEARWRLLDQKGDLKDSRVFHEE EQHQGSIGDQIRAQSDLLKRLAAQLAKDVKPIAVAAEAPPPATARKPVAKPKVKEEEG PKMPLVVPIRTDAEVYRF" misc_feature complement(5571360..5571917) /locus_tag="PA4963" /note="Intermembrane transporter PqiABC lipoprotein subunit PqiC [Cell wall/membrane/envelope biogenesis]; Region: PqiC; COG3009" /db_xref="CDD:442246" gene complement(5572222..5574486) /gene="parC" /locus_tag="PA4964" /db_xref="GeneID:879741" CDS complement(5572222..5574486) /gene="parC" /locus_tag="PA4964" /EC_number="5.99.1.-" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="DNA topoisomerase IV subunit A" /protein_id="NP_253651.1" /db_xref="GeneID:879741" /translation="MSESLDLSLEGVERRSLAEFTEQAYLNYSMYVIMDRALPHIGDG LKPVQRRIVYAMSELGLDADSKHKKSARTVGDVLGKFHPHGDSACYEAMVLMAQPFSY RYPLVDGQGNWGAPDDPKSFAAMRYTEARLSRYSEVLLSELGQGTVDWVPNFDGTLDE PAVLPARLPNLLLNGTTGIAVGMATDVPPHNLREVASACVRLLDQPGATVAELCEHVP GPDFPTEAEIITPRADLQKVYETGRGSVRMRAVYRVEDGDIVIHALPHQVSGSKVLEQ IAGQMQAKKLPMVADLRDESDHENPTRIVIIPRSNRVDVEELMTHLFATTDLETSYRV NLNIIGLDGKPQVKDLRQLLSEWLQFRIGTVRRRLQFRLDKVERRLHLLDGLLIAFLN LDEVIHIIRTEDQPKAVLMERFELSEVQADYILDTRLRQLARLEEMKIRGEQEELLKE QKRLQTLLGSEAKLKKLVREELIKDAETYGDDRRSPIVARAEARALSETELMPTEPVT VVLSEKGWVRCAKGHDIDAAGLSYKAGDGFKAAAPGRSNQYAVFIDSTGRSYSLPAHS LPSARGQGEPLSGRLTPPPGASFECVLLPDDDALFVIASDAGYGFVVKGEDLQAKNKA GKALLSLPNGSAVVAPRPVRDVEQDWLAAVTTEGRLLLFKVSDLPQLGKGKGNKIIGI PGERVASREEYLTDLAVLPAGATLVLQAGKRTLSLKGDDLEHYKGERGRRGNKLPRGF QRVDSLLVDIPPQD" misc_feature complement(5572249..5574471) /gene="parC" /locus_tag="PA4964" /note="DNA topoisomerase 4 subunit A; Region: PRK05561" /db_xref="CDD:235503" misc_feature complement(5572852..5572971) /gene="parC" /locus_tag="PA4964" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature complement(5572708..5572845) /gene="parC" /locus_tag="PA4964" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature complement(5572558..5572692) /gene="parC" /locus_tag="PA4964" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature complement(5572384..5572542) /gene="parC" /locus_tag="PA4964" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" gene complement(5574494..5575018) /locus_tag="PA4965" /db_xref="GeneID:879742" CDS complement(5574494..5575018) /locus_tag="PA4965" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253652.1" /db_xref="GeneID:879742" /translation="MTQRAPGQRLGRIMLVLAWIAGLALATRYFGVWEDRQRNPNQAP QSIHGDGYVELRLASSRQGHYLLNGQINGQGVTFLLDTGATQVAVPEALAARLALERG APITLSTANGRATGWRTRLDQLQLGDIRLSGVAALIAPGMDGDEVLLGMSALKQLEFT QRDGTLVLRQNTSP" misc_feature complement(5574503..5574952) /locus_tag="PA4965" /note="Predicted aspartyl protease [General function prediction only]; Region: COG3577" /db_xref="CDD:442797" gene complement(5575015..5576028) /locus_tag="PA4966" /db_xref="GeneID:879896" CDS complement(5575015..5576028) /locus_tag="PA4966" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253653.1" /db_xref="GeneID:879896" /translation="MRRLLAILGLFGGLVQAAEAPPEPPVPAALSFISEHAVEGMRGG NLSGLAWCGGALWTVSDRDDDRLYRLQPSAEGSDQPWQAEAESFIAPTPPDSGLPWGM STRVWLSGLVRGGNLDFEGIACDAAGNRYLVSEAHAAVLQLPVSGAPNWLRLPPGLLP QARASGMLMNFNALFEGIAVDPEGKRLWLAAERERRGLLVAHRDNSAWRCEGSCVLLA EGGKIEPPPELGSARKLPKDFSDLAFYRGKLFTLERLAHQICRRDLAQAKVERCWSFA SAVLAPERRYELPYGVAEALSLDDKGAWLGIDNGDHARADGDVRPFVLRFAAPAGGWL GDK" misc_feature complement(<5575438..5575899) /locus_tag="PA4966" /note="Region: SdiA-regulated; cl42058" /db_xref="CDD:477930" gene complement(5576028..5577917) /gene="parE" /locus_tag="PA4967" /db_xref="GeneID:879897" CDS complement(5576028..5577917) /gene="parE" /locus_tag="PA4967" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="DNA topoisomerase IV subunit B" /protein_id="NP_253654.1" /db_xref="GeneID:879897" /translation="MATYNADAIEVLSGLDPVRKRPGMYTDTTRPNHLAQEVIDNSVD EALAGHAKSVQVILHQDNSLEVIDDGRGMPVDIHPEEGVPGVELILTKLHAGGKFSNK NYQFSGGLHGVGISVVNALSTRVEVRVKRDANEYRMTFADGFKDSDLEVIGTVGKRNT GTSVHFWPDPKYFDSAKFSVSRLKHVLKAKAVLCPGLSVVFEDKNTGERVEWHFEDGL RSYLTDAVAELPRLPDEPFCGNLEGSKEAVSWALLWLPEGGESVQESYVNLIPTAQGG THVNGLRQGLLDAMREFCEFRNLLPRGVKLAPEDVWERIAFVLSMKMQEPQFSGQTKE RLSSREAAAFVSGVVKDAFSLWLNEHAEIGLQLAELAISNAGRRLKAGKKVERKKITQ GPALPGKLADCAGQEPMRAELFLVEGDSAGGSAKQARDKEFQAIMPLRGKILNTWEVD GGEVLASQEVHDIAVAIGVDPGASDLAQLRYGKICILADADSDGLHIATLLCALFVRH FRPLVEAGHVYVAMPPLYRIDLGKDIYYALDEAERDGILERLAAEKKRGKPQVTRFKG LGEMNPLQLRETTMDPNTRRLVQLTLEDATGTLEIMDMLLAKKRAGDRKSWLESKGNL AEVLV" misc_feature complement(5576034..5577917) /gene="parE" /locus_tag="PA4967" /note="DNA topoisomerase IV subunit B; Reviewed; Region: PRK05559" /db_xref="CDD:235501" gene complement(5577929..5578549) /locus_tag="PA4968" /db_xref="GeneID:879898" CDS complement(5577929..5578549) /locus_tag="PA4968" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253655.1" /db_xref="GeneID:879898" /translation="MTATSPSLLYIHGFNSSPESHKARQLQAAFGHLGLAEGLRVPAL HHHPRQAIAQLERAIAELGRPVLVGSSLGGYYATHLAERHGLAAILVNPAVAPHRSFD GYLGAQTNHYSGETWELTEDHVAALAELEVAHLQRPERYQVWLQTADETLDYRVAQAF YRACALRIQAGGDHGFQGFARHLPALLAFAGYPSALWRDTDFSTFD" misc_feature complement(5577977..5578534) /locus_tag="PA4968" /note="Predicted esterase YcpF, UPF0227 family [General function prediction only]; Region: YcfP; COG3150" /db_xref="CDD:442384" gene complement(5578681..5579499) /gene="cpdA" /locus_tag="PA4969" /db_xref="GeneID:880028" CDS complement(5578681..5579499) /gene="cpdA" /locus_tag="PA4969" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="cAMP phosphodiesterase" /protein_id="NP_253656.1" /db_xref="GeneID:880028" /translation="MSRHSNTPATDASVLLVQLSDSHLFAEDGARLLGMDTAHSLEKV VERVAREQPRIDLILATGDVSQDGSLDSYTRFRRLSAPLDAPLRWFAGNHDEREPMQR ATEGSDLLEQVVDVGNWRVVLLDSSIPGAVPGYLEEDQLELLRRAIDSAGERFLLVSF HHHPVPIGSDWMDPIGLRNPQALFDLLAPYPQVRCLLWGHIHQEFDRQRGPLRLLASP STCVQFAPGSSDFTLDRLAPGYRWLRLHDDGRLETGISRVDDVVFEVDYDTAGY" misc_feature complement(5578750..5579454) /gene="cpdA" /locus_tag="PA4969" /note="Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain; Region: MPP_GpdQ; cd07402" /db_xref="CDD:277347" misc_feature complement(order(5578834..5578836,5578894..5578896, 5578900..5578902,5579017..5579019,5579218..5579223, 5579302..5579304,5579311..5579313,5579431..5579433, 5579437..5579439)) /gene="cpdA" /locus_tag="PA4969" /note="active site" /db_xref="CDD:277347" misc_feature complement(order(5578894..5578896,5578900..5578902, 5579017..5579019,5579221..5579223,5579311..5579313, 5579431..5579433,5579437..5579439)) /gene="cpdA" /locus_tag="PA4969" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:277347" misc_feature complement(order(5578753..5578755,5578759..5578761, 5578768..5578770,5578855..5578857,5578861..5578869, 5578876..5578890,5578909..5578911,5578915..5578917, 5578996..5579001,5579005..5579007,5579266..5579268, 5579293..5579295,5579302..5579304,5579359..5579364, 5579371..5579376,5579383..5579385,5579392..5579394)) /gene="cpdA" /locus_tag="PA4969" /note="homohexamer interface [polypeptide binding]; other site" /db_xref="CDD:277347" protein_bind 5579635..5579647 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(5579653..5580111) /locus_tag="PA4970" /db_xref="GeneID:880029" CDS complement(5579653..5580111) /locus_tag="PA4970" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253657.1" /db_xref="GeneID:880029" /translation="MGLNLLRERYRVDLASLQATCEANYARLMRLLPDMREAQASRRV ALSEGERLLGVLALEVTEACPYTTTLQVRQELGLPWLPAPRLEVRVYHDARMAEVIGA EQARRLMAIYPYPNQAMHQPDEKNQLNLFLGEWLAHCLACGHEMEPVAQR" misc_feature complement(5579665..5580102) /locus_tag="PA4970" /note="Uncharacterized conserved protein YqiB, DUF1249 family [Function unknown]; Region: yqiB; COG3151" /db_xref="CDD:442385" gene complement(5580102..5580719) /gene="aspP" /locus_tag="PA4971" /db_xref="GeneID:879756" CDS complement(5580102..5580719) /gene="aspP" /locus_tag="PA4971" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="adenosine diphosphate sugar pyrophosphatase" /protein_id="NP_253658.1" /db_xref="GeneID:879756" /translation="MSETFKPAPGDVELVQREECFRGFYRLDRLRLRHRQFDGSMGRE ISRELFVRHDAVCVLPYDPQRDCVVLIEQFRVGAMQKLANPWLLELVAGLIDKDEQPE EVAHREAMEEAGLTLGALWPITQYLPSPGGTDEVVHLFVGRCDSEGVGGVHGLPEEGE DIRVHVWPLEDALQAVRDGRINNAASIIALQWLALNRAEVRGLWA" misc_feature complement(5580129..5580689) /gene="aspP" /locus_tag="PA4971" /note="Adp Ribose Pyrophosphatase; Region: NUDIX_ADPRase; cd24155" /db_xref="CDD:467603" gene 5580962..5581708 /locus_tag="PA4972" /db_xref="GeneID:879757" CDS 5580962..5581708 /locus_tag="PA4972" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253659.1" /db_xref="GeneID:879757" /translation="MRLLKFAALGSLVVLLSACQSLFKPGLDDPLPTERLASEHLKPG CQGEQCPLVNIDTLKFPDEPQLDPIVERALLEMTRENNETPLPASLAAYERQFLDSAE PGWSSYLQAKVREQHDGLVIIELSSYLFTGGAHGMPGRGFINYDRRQHKVLSLQDMLV PGQEEAFWKQAELAHKAWLLANKLDQDADFQKTWPFQRTPHVALTFGAVTLKYDAYSI APYSYAHPELKIPYPRLNGIVKPNLFPGRG" misc_feature 5581448..5581657 /locus_tag="PA4972" /note="Protein of unknown function (DUF3298); Region: DUF3298; pfam11738" /db_xref="CDD:463337" gene complement(5581762..5583645) /gene="thiC" /locus_tag="PA4973" /db_xref="GeneID:879702" CDS complement(5581762..5583645) /gene="thiC" /locus_tag="PA4973" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="thiamine biosynthesis protein ThiC" /protein_id="NP_253660.1" /db_xref="GeneID:879702" /translation="MSATQKNNITRLEQLDRQSTQPFPNSRKVYLTGSRPDIRVPVRE ISLADTPTAFGGEKNPPVFVYDTSGPYTDPEVRIDLRKGLPDVRSRWIDERGDTEILP GLTSEFGQARLADASLDALRFAHVRTPRRAKPGANVSQMHYAKKGIITPEMEYIAIRE NMKLQEARAAGLLDQQHPGHSFGANIPKEITPEFVREEVARGRAIIPANINHTELEPM IIGRNFLVKINGNIGNSALGSSIEEEVEKLTWGIRWGADTVMDLSTGKHIHETREWIL RNSPVPIGTVPIYQALEKVNGVAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVP LTAKRVTGIVSRGGSIMAKWCLAHHQENFLYTHFEEICEIMKAYDVSFSLGDGLRPGS VADANDAAQFGELETLGELTKIAWKHDVQVMIEGPGHVPMQLIKENMDKQLECCDEAP FYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKDDVKTGIIT YKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARAFHDETLPKDS AKVAHFCSMCGPKFCSMKITQEVRDYAKENGLSDESKAIEAGFQEQAARFKDEGSVIY RQV" misc_feature complement(5581765..5583609) /gene="thiC" /locus_tag="PA4973" /note="thiamine biosynthesis protein ThiC; Provisional; Region: PRK09284" /db_xref="CDD:236451" gene 5584101..5585549 /locus_tag="PA4974" /db_xref="GeneID:879703" CDS 5584101..5585549 /locus_tag="PA4974" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253661.1" /db_xref="GeneID:879703" /translation="MLRRLSLAAAVAAATGVAWAAQPTPLPTKTDLISVYKEAVDNNA DLAAAQADYLARKEVVPQARAGLLPQLGAGARVGDTRIAFDERPATVKRNSQVVQATL SQPLFRADRWFQWQAAKETSDQARLEFSATQQDLILRSAETYFTVLRAQDNLATSKAE EAAFKRQLDQANERFDVGLSDKTDVLEAQASYDTARANRLIAEQRVDDAFQALVTLTN RDYSAIEGMRHTLPVVPPAPNDAKAWVDTAVQQNLRLLASNYAVNAAEETLRQRKAGH LPTLDAVAQYQKGDNDALGFANSAANPLVHYGKYVDERSIGLELNIPIYSGGLTSSQV RESYQRLNQSEQSREGQRRQVVQDTRNLHRAVNTDVEQVQARRQAIISNQSSLEATEI GYQVGTRNIVDVLNAQRQLYAAVRDYNNSRYDYILDTLRLKQAAGTLSPADLEALSAY LKQDYDPDKDFLPPDLAKAAAEQLQSKPRQQY" misc_feature 5584182..5585459 /locus_tag="PA4974" /note="type I secretion outer membrane protein, TolC family; Region: type_I_sec_TolC; TIGR01844" /db_xref="CDD:273829" gene complement(5585615..5586319) /locus_tag="PA4975" /db_xref="GeneID:880914" CDS complement(5585615..5586319) /locus_tag="PA4975" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="NAD(P)H quinone oxidoreductase" /protein_id="NP_253662.1" /db_xref="GeneID:880914" /translation="MNVLIVHAHNEPQSFTRALCDQACETLAGQGHAVQVSDLYAMNW NPVASAADFAERADPDYLVYALEQRESVKRQSLAADIQAELDKLLWADLLILNFPIYW FSVPAILKGWFDRVLVSGVCYGGKRFYDQGGLAGKKALVSLTLGGRQHMFGEGAIHGP LEDMLRPILRGTLAYVGMQVLEPFVAWHVPYISEEARGNFLRAYRARLENLEQDVPLR FPRLEQFDALLQPLAR" misc_feature complement(5585687..5586316) /locus_tag="PA4975" /note="Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only]; Region: MdaB; COG2249" /db_xref="CDD:441850" gene complement(5586370..5587551) /gene="aruH" /locus_tag="PA4976" /db_xref="GeneID:880915" CDS complement(5586370..5587551) /gene="aruH" /locus_tag="PA4976" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="arginine:pyruvate transaminase AruH" /protein_id="NP_253663.1" /db_xref="GeneID:880915" /translation="MRYSDFTQRIAGDGAAAWDIHYRALARVEQGEEILLLSVGDPDF DTPAPIVQAAIDSLLAGNTHYADVRGKRALRQRIAERHRRRSGQAVDAEQVVVLAGAQ CALYAVVQCLLNPGDEVIVAEPMYVTYEAVFGACGARVVPVPVRSENGFRVQAEEVAA LITPRTRAMALNSPHNPSGASLPRATWEALAELCMAHDLWMISDEVYSELLFDGEHVS PASLPGMADRTATLNSLSKSHAMTGWRVGWVVGPAALCAHLENLALCMLYGSPEFIQD AACTALEAPLPELEAMREAYRRRRDLVIECLADSPGLRPLRPDGGMFVMVDIRPTGLS AQAFADRLLDRHGVSVLAGEAFGPSAAGHIRLGLVLGAEPLREACRRIALCAAELLGQ A" misc_feature complement(5586403..5587551) /gene="aruH" /locus_tag="PA4976" /note="Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; Region: AspB; COG0436" /db_xref="CDD:440205" gene complement(5587574..5589253) /gene="aruI" /locus_tag="PA4977" /db_xref="GeneID:880189" CDS complement(5587574..5589253) /gene="aruI" /locus_tag="PA4977" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253664.1" /db_xref="GeneID:880189" /translation="MGARALRRERRLRWSPNWTRILPMQPQKTLTAGQALVRLLANYG VDTVFGIPGVHTLELYRGLPGSGIRHVLTRHEQGAGFMADGYARVSGKPGVCFVITGP GVTNVATAIGQAYADSVPLLVISSVNHSASLGKGWGCLHETQDQRAMTAPITAFSALA LSPEQLPELIARAYAVFDSERPRPVHISIPLDVLAAPVAHDWSAAVARRPGRGVPCSE ALRAAAERLAAARRPMLIAGGGALAAGEALAALSERLAAPLFTSVAGKGLLPPDAPLN AGASLCVAPGWEMIAEADLVLAVGTEMADTDFWRERLPLSGELIRVDIDPRKFNDFYP SAVALRGDARQTLEALLVRLPQEARDSAPAAARVARLRAEIRAAHAPLQALHQAILDR IAAALPADAFVSTDMTQLAYTGNYAFASRAPRSWLHPTGYGTLGYGLPAGIGAKLGAP QRPGLVLVGDGGFLYTAQELATASEELDSPLVVLLWNNDALGQIRDDMLGLDIEPVGV LPRNPDFALLGRAYGCAVRQPQDLDELERDLRAGFGQSGVTLIELRHACAR" misc_feature complement(5587577..5589169) /gene="aruI" /locus_tag="PA4977" /note="5-guanidino-2-oxopentanoate decarboxylase; Region: PRK07524" /db_xref="CDD:236041" gene complement(5589295..5591385) /locus_tag="PA4978" /db_xref="GeneID:880190" CDS complement(5589295..5591385) /locus_tag="PA4978" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253665.1" /db_xref="GeneID:880190" /translation="MNRENLKRLLAPRHLAFIGGRGMARALKRCAEGGFAGQLWLVNP QHAELEGVPCVASVADLPCGPDAAFVATNRELTLDAVAALAAKGAGGAICYASGFAET GEQGLAVQRRLLAAAGEMALLGPNCYGLLDYLHGAALWPVAHGGRQVERGVAVLTQSG NFAYNLSMSDRSLPVAYMASVGNQAQLGIAELMDVLLDEPRVTAIGLHLEGLKNVPGF ARAAYKALQKGVPVIALKTGVSKIGAALALSHTSSLAGSDALYDSLFERLGVIRVSGP VSFVETLKAAACGHLPGGPSLVALACSGGDAGLIADYAERNGLGLPSFDAGQRDELAG VLPDYANIANPLDFTTAIWGDAAALEEMLDSALRSPADAALLVLDYPGEETGERPQCD LLLQRYCAALKRHGKVGFIASAFPELLPARARELLHGEGVAALQGVEDGLAAWGRIAR YRQRRAALLERGEAALVPICPGPLAGDGYLLDEWQSKQALKPFGLPLPQGVLSTPGQA REAALDLGFPLVLKAVSAALPHKTEAGGVALGLRNEAALEAALFDMRESLARHAPQLV FERVLLERMAGAPLAELIVGVKREEGFGLALVIGAGGILVELLRDSRSLLLPTTDAAI RDALLSLRSAPLLSGFRGRPAVCMEALVAAIRAVAEFACEHAERLLELDVNPLLADAE GALAVDALIRLANG" misc_feature complement(5589304..5591385) /locus_tag="PA4978" /note="Acyl-CoA synthetase (NDP forming) [Energy production and conversion]; Region: PatZN; COG1042" /db_xref="CDD:440664" gene complement(5591452..5592612) /locus_tag="PA4979" /db_xref="GeneID:880425" CDS complement(5591452..5592612) /locus_tag="PA4979" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_253666.1" /db_xref="GeneID:880425" /translation="MDFRLTQEQDMLVEAVRSFVEKELLPHEDDIDRADAVSPELAAQ IRGKAIAAGFYAFNMPEEVGGGGLDYLSQALVERELSKVSWALHVFVARPSKILMACT GEQLGDYLLPCVQGEKTDCFALTEPGAGSDANSIKTRAVRDGDAFVINGSKHFISHAG HADFAIVFAVTDSYEHNGRKRNAVTAFLVDKGTPGMTVRRGPKCVSNRGYHTYEIFFD DCRVPASKVLGEVGKGWEVANAWLTAGRVMVAANCVGQAQRALDLSLRWAADRKQFGQ PIGSYQGVSFKLADMATQIRAAELMTLHTAWKMDQGTMTDGEAGMAKLFASETLGKVA DEAVQIFGGMGLMDEGPVERIWRNARIERIWEGTSEIQRHIVSRELLRPLLR" misc_feature complement(5591467..5592612) /locus_tag="PA4979" /note="Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]; Region: CaiA; COG1960" /db_xref="CDD:441563" gene complement(5592633..5593424) /locus_tag="PA4980" /db_xref="GeneID:880426" CDS complement(5592633..5593424) /locus_tag="PA4980" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="NP_253667.1" /db_xref="GeneID:880426" /translation="MTDLSPLQTRVEAGIAWLVLNRPQQRNALDIPTLEALHVRLDAC ERDPAVRAVVLGGSGRSFCAGADLAEWAAAEARGELESYGWTEAAHALMGRLHALDKP TVAAVNGSAVGAGMDLALCCDFRIAAASARFKAGYTGMAYCPDAGASWHLPRLLGSEA AKRLLFLDEAWSAERALGAGLVGEVVADEHLVEAVGAFAARLASGPTFAFAQTKRLLR DGAGRSLAEQLRAEQAAGLLCGRSEDAAEALRAVAEKRSPQFSGR" misc_feature complement(5592657..5593406) /locus_tag="PA4980" /note="Enoyl-CoA hydratase/carnithine racemase [Lipid transport and metabolism]; Region: CaiD; COG1024" /db_xref="CDD:440647" gene complement(5593683..5595095) /locus_tag="PA4981" /db_xref="GeneID:880427" CDS complement(5593683..5595095) /locus_tag="PA4981" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_253668.1" /db_xref="GeneID:880427" /translation="MADGKERLQLTRALASRHIFMLSLGGVIGTGLFMGSGVTINQGG PAGAVLAYLVAGVLMYLVMVCLGELSVQMPVSGSFQAHATRFIGPATGFMIGWVYWMS WASTVGLEFTAAGMLMTRWFPEVPVWLWSGFFVVVLFSLNALATRAFGEAEYWFAGIK VAAILVFIVVGGLVIFGGIELKSGAPAPMFSNLVGERLFPNGLSAVFAVMMTVVYAFQ GCEIMGVAAGETERPEKSIPRAVRNVVFRVLIFYVLAIVVLSAIIPWQQAGLMESPFV QVFDMVGIPYAADLMNFVILTAILSVGNSGLYASTRILWAMSRSGMAPRGLSKLSARG VPLYALLITLCFALLSLLTSVVAADTLFMVLMAVSGMSGTVTWIVIAYAQYRFRREHM ASGGTVAELKYAAPLFPLVPLACIAVCCSLFVFLALDPTQRPSLYWGFGFIAACYLAY YVVRRRQPQGLGDPALGRAG" misc_feature complement(5593689..5595095) /locus_tag="PA4981" /note="Amino acid permease [Amino acid transport and metabolism]; Region: LysP; COG0833" /db_xref="CDD:440595" protein_bind complement(5594309..5594321) /locus_tag="PA4981" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4981" /bound_moiety="AmrZ" protein_bind 5594326..5594338 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA4981" /bound_moiety="AmrZ" gene complement(5595279..5597531) /locus_tag="PA4982" /db_xref="GeneID:880340" CDS complement(5595279..5597531) /locus_tag="PA4982" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_253669.2" /db_xref="GeneID:880340" /translation="MSGHGGVLARRLLWRVLLFSLCFTVLAGAVQLFFEYRREMREIE ARLELIRSGYLASFERSLWDLNQEQLNVQLRGLGDFPDIARVSLQSADFNLLQGDQRP RGMLRVERFPLSYQPPGGERRQLGELEIAIDLAAVYRRLVSGGLASLLWMGSFLCGLA VALSWLFHSLVTRHLWRMSEFAGHIAEGDLQQPLRLDKVDRERDEIDAVAAALEDMRQ ALRTDRRRRDADRDELRRQVERRTASLRRAKDQAEAADRAKSRFLATMSHEIRTPLNG ILGMAELLREASLGERDRQRLRALATAGEGLLAILNEVLHFARLEEAPDVPEAVDFSL RSLLEDVLTLLEPRARENATRLDLWLDPQVHDGHRGAEQFLRQVLTNLLGNAVKFTEA GEVRVRVERLARSAGSERLRLSVADDGIGIPEEMRERIFERFTQGGDAVTRRYGGTGL GLAISKRLVEALGGRIGVESRVGQGSTFWFEIELALASLSGATPPAASVSALEVLLVE DVALNREVAQGLLERDGHRVMLAEDAGPALALCRQRRFDLILLDMHLPGMAGLELCAG IRRQLDGLNRATPIFAFTASIQPDMVRRYFAAGMQGVLGKPLRMDELRRALGEVGTSV PALAVDAALDRQMLETHRRLLGRHKLAGLLGNLLGSLDEQLPLLAEALDQADLAEAAN IAHRLSGSCHSMGLVALGAGLGELEREALGAAGVDPRAWGARLGSLRRDGAEALRRAG FLGEADSAAG" misc_feature complement(5597109..5597429) /locus_tag="PA4982" /note="Periplasmic sensor domain found in signal transduction proteins; Region: CHASE5; pfam17149" /db_xref="CDD:319167" misc_feature complement(5595435..>5596979) /locus_tag="PA4982" /note="TMAO reductase sytem sensor TorS; Region: TMAO_torS; TIGR02956" /db_xref="CDD:274362" misc_feature complement(5595315..5595548) /locus_tag="PA4982" /note="Hpt domain; Region: Hpt; pfam01627" /db_xref="CDD:426352" gene complement(5598308..5599042) /locus_tag="PA4983" /db_xref="GeneID:880341" CDS complement(5598308..5599042) /locus_tag="PA4983" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_253670.1" /db_xref="GeneID:880341" /translation="MAMVPRVLVVDDDPVIRELLQAYLGEEGYDVLCAGNAEQAEACL AECAHLGQPVELVLLDIRLPGKDGLTLTRELRVRSEVGIILITGRNDEIDRIVGLECG ADDYVIKPLNPRELVSRAKNLIRRVRHAQASAGPARQALRQFGDWLLDADRRRLIDHA GNETLLTHGEFQLLGAFLRNSGHTLSRDQLMDQIRNREWLPSDRSIDVLVGRLRRKLR DDPAEPQLIITIHGAGYLFTAAASDA" misc_feature complement(5598347..5599036) /locus_tag="PA4983" /note="two-component system response regulator TorR; Region: PRK10766" /db_xref="CDD:182711" gene complement(5599160..5599807) /locus_tag="PA4984" /db_xref="GeneID:880153" CDS complement(5599160..5599807) /locus_tag="PA4984" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253671.1" /db_xref="GeneID:880153" /translation="MNQEVRFSRLEPEQRKALLIEATLACLKRHGFQGASVRKICAEA GVSVGLINHHYDGKDALVAEAYLAVTGRVMRLLRGAIDTAPGGARPRLSAFFEASFSA ELLDPQLLDAWLAFWGAVGSIEAIGRVHDHSYGEYRALLVGVLRQLAEEGGWADFDAE LAAISLSALLDGLWLESGLNPATFTPRQGVQICEAWVDGLEAGAHRRFRRAMEAC" misc_feature complement(5599214..5599783) /locus_tag="PA4984" /note="Tetracyclin repressor-like, C-terminal domain; Region: TetR_C_11; cl23808" /db_xref="CDD:474063" gene complement(5599884..5600975) /locus_tag="PA4985" /db_xref="GeneID:880154" CDS complement(5599884..5600975) /locus_tag="PA4985" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253672.1" /db_xref="GeneID:880154" /translation="MNRSFPLRRAASARPHPVFPCRVLLGAVLLAFGGLAPVQADDGL VVVGYGGAGQKAQEVAFFQPFTQQTGIPVVQSEYNGEMARIKVMADTGHADWDLVQVE GPDLARGCDDGLFERLDWQAIGGKQQLIANAAQECGSAALVWGVAIGYDADRLQQPPA SWADFWDVQRFPGKRGLRKRAIYNLEFALLADGVPREQVYPLLATRAGADRAFAKLGQ LKPYIQWWEAGAQPAQWLAAGDVVMTSTYTGRIADAHRAGRNLALVWQGSLYGMDYWA VVKGSKRGAEARRFIAFANAPDAQVRYVENIPYGPTNRQAAQRLPAQLASWVPTAPAN LEQGLAMDDEFWVEHGEELEERFNAWASQ" misc_feature complement(5600043..5600846) /locus_tag="PA4985" /note="The periplasmic-binding component of an uncharacterized ABC transport system from Rhodopseudomonas palustris CGA009 and related proteins; contains the type 2 periplasmic-binding fold; Region: PBP2_polyamine_RpCGA009; cd13589" /db_xref="CDD:270307" misc_feature complement(order(5600157..5600159,5600163..5600165, 5600235..5600237,5600436..5600438,5600826..5600828)) /locus_tag="PA4985" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270307" gene 5601149..5603095 /locus_tag="PA4986" /db_xref="GeneID:879015" CDS 5601149..5603095 /locus_tag="PA4986" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_253673.1" /db_xref="GeneID:879015" /translation="MNFPHLFSPLEIRGKRLKNRIMSSGHDTSMPTDNLVNEPLVAYH RARARGGAGLIVMQVAGVHDSARYTSHVLMATDDACIPGYRRVAEACHAEGCVVLSQI FHPGREIMESADGLLAVAYSASASPNERFRVMPRELDQPLIDEIVAGYAAAARRLHQA GLDGVEVVASHGYLPAQFLNPRVNRRTDGYNGDLDARLRFLREVLAAVRAATSEDFIV GLRLSADERDPEGLSESESLQAAEAVQGELDYLHIVAGTSASLGGAIHIVPPMAIEPA YLAREASTFKARLAIPLFVTGRINQPQEAEAILARGQADVCGMTRALICDPQMPNKAE AGRSDDVRACIACNQACIGHFHRGYPISCIQHPETGRELTYATPNPASRRKRVLVAGG GPAGMKAAAVAAQRGHEVVLCEAGAQLGGQVNLAQLLPRRAEFGGASTNLQREMQLAG VEVRRNTPVDRALVERERPDLVIVATGAEPYWPPFERGGELQVVDAWQVLRGEVRVGR SVLVTDWRGDWIGPGIAEKLVREGHQVRLAVNGTHCGESLPLYVRDQLAGELHRLGIP VTPYARLYGCDDTTVYMQHSASGEAMLFEEVDTLVLCQGHQPVDRLADSLHGLAEVLR IGDCLAPRTAEEAIYEGLKAAWSI" misc_feature 5601161..5603092 /locus_tag="PA4986" /note="A large family of domains similar to triose phosphate isomerase (TIM) which, in general, share an eight beta/alpha closed barrel structure; Region: TIM-like beta/alpha barrel domains; cl21457" /db_xref="CDD:473867" misc_feature order(5601221..5601223,5601227..5601229,5601323..5601325, 5601449..5601451,5601665..5601667,5601809..5601811, 5602106..5602111) /locus_tag="PA4986" /note="putative active site [active]" /db_xref="CDD:240085" misc_feature order(5601221..5601223,5601227..5601229,5601323..5601325, 5601449..5601451,5601809..5601811,5602106..5602111) /locus_tag="PA4986" /note="putative FMN binding site [chemical binding]; other site" /db_xref="CDD:240085" misc_feature order(5601659..5601661,5601665..5601667) /locus_tag="PA4986" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:240085" misc_feature 5601665..5601667 /locus_tag="PA4986" /note="putative catalytic residue [active]" /db_xref="CDD:240085" protein_bind 5602901..5602913 /locus_tag="PA4986" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 5603173..5603772 /locus_tag="PA4987" /db_xref="GeneID:879016" CDS 5603173..5603772 /locus_tag="PA4987" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253674.1" /db_xref="GeneID:879016" /translation="MPRPSPPDATDTPRSETHFLGTRIRGLRKRRGLTLAELAAQSEL TAGYISQLERNLAYPSIPALFNIARSLGVTIQWFFASEAAVDPADAGYVVRRNTRMSV HYEDGIIDELLTPQPSRQLEILHSRFPPGTYSQQSYSHEGEEAGYILSGIFELWVGDR HFQLREGDSFSYSSQEPHRYGNPGDSDTLVLWVITPPTF" misc_feature 5603230..5603442 /locus_tag="PA4987" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" misc_feature 5603491..5603757 /locus_tag="PA4987" /note="XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain; Region: cupin_XRE_C; cd02209" /db_xref="CDD:380339" misc_feature order(5603500..5603502,5603542..5603544,5603548..5603550, 5603581..5603583,5603590..5603592,5603602..5603604, 5603704..5603706,5603710..5603712,5603746..5603748) /locus_tag="PA4987" /note="putative active site [active]" /db_xref="CDD:380339" gene complement(5603821..5605098) /gene="waaA" /locus_tag="PA4988" /db_xref="GeneID:880145" CDS complement(5603821..5605098) /gene="waaA" /locus_tag="PA4988" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-deoxy-D-manno-octulosonic acid transferase" /protein_id="NP_253675.1" /db_xref="GeneID:880145" /translation="MNRTLYTLLFHLGLPLVALRLWWRARQAPAYAKRIGERFSLSLP EVPPGGIWVHAVSVGESIAAAPMVRALLERHPQLPVTVTCMTPTGSERIRALFGEQVR HCYLPYDLPWAAARFLDRVRPRLAVIMETELWPNHIHACAVRGIPVALANARLSERSA RGYARFAGLTRPMLAELSWIAVQTEAEAERFRRLGARPECVSVTGSIKFDLRIDPQLP LAAAALREEWDATARPLWIAASTHAGEDEIVLAAHRRLLETRPDALLILVPRHPERFA GVHELCRREGFATVRRSGGEPVARATQVLLGDTMGELLFLYALADIAFVGGSLVPNGG HNLLEPAALGKPVFAGPHLFNFLDIAAQLRDAGALLEVTDAGELCDGLARLWAQPEVA TAMATAGEKVLRNNQGALERLLAGLARLLGRGG" misc_feature complement(5603866..5605098) /gene="waaA" /locus_tag="PA4988" /note="3-deoxy-D-manno-octulosonic-acid transferase; Reviewed; Region: PRK05749" /db_xref="CDD:235589" gene complement(5605134..5606018) /locus_tag="PA4989" /db_xref="GeneID:880146" CDS complement(5605134..5606018) /locus_tag="PA4989" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253676.1" /db_xref="GeneID:880146" /translation="MQWNLEQIRLFVSVAERQSFSAAARELKRVQSAVSNGIALLEAD LGVTLFERSSGRQPRLTDEGRVLLAEAREVLRQCERLQGRALGLARGEEPRLRLAQDE AMPYQPVLDSLEALAQRFPSLEVQVSSGGQGDVTRRLLEEQADLGLLFHHERMPESLE RRRLGSVEMVTVCGAGHPLAGLQRVSRRELAQHRQLLIVPQQSGYPGGEQISPQVWRL DSFYSMAELLMRNLGWAWLPRHVVQYPTYDRLMVELTSDWTPPALVVELVWRRNEVLG PAAAWLGETFTRHLRAIG" misc_feature complement(5605143..5606009) /locus_tag="PA4989" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 5606103..5606435 /locus_tag="PA4990" /db_xref="GeneID:880147" CDS 5606103..5606435 /locus_tag="PA4990" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="SMR multidrug efflux transporter" /protein_id="NP_253677.1" /db_xref="GeneID:880147" /translation="MTNYLYLAIAIAAEVVATTSLKAVAGFSKPLPLLLVVGGYVLAF SMLVLVMRTLPVGVVYAIWSGLGIVLVSLVAMFVYGQRLDPAALLGIGLIIAGVLVIQ LFSRASGH" misc_feature 5606109..5606423 /locus_tag="PA4990" /note="Multidrug transporter EmrE and related cation transporters [Defense mechanisms]; Region: EmrE; COG2076" /db_xref="CDD:441679" gene 5606496..5607671 /locus_tag="PA4991" /db_xref="GeneID:880166" CDS 5606496..5607671 /locus_tag="PA4991" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253678.1" /db_xref="GeneID:880166" /translation="MPQALSTDILIVGGGIAGLWLNARLRRAGYATVLVESASLGGGQ SVKSQGIIHGGAKYALHGALTGASEAIADMPRRWRACLGSDGELDLRGVRLLSEAHYL WSPGGLAGSLTSFFASKAVRSRVEQAKGEDLPPALRDKGFKGKAYRLTEIVFDVPDLI RRLAELAGDSLLAGERIEPLREGRELAGLCVDGREIRAQRVVLSAGAGNEALLRELGL EQPAMQRRPLHMVMVKAATLKPLYAHCLGAGPKPRITVTTHPTRDGQSVWYLGGDIAE TDGVARDEAAQIAEARRELAKLLPWIDLGQAQWATLRVDRAEPAQSNLLRPDNAFLAE QGRLLVGWPTKLALAPDFADRVCARLEEDGIRPSEHAALPQLPRPPLAEPAWEVAFA" misc_feature 5606511..>5607404 /locus_tag="PA4991" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" gene 5607668..5608480 /locus_tag="PA4992" /db_xref="GeneID:880167" CDS 5607668..5608480 /locus_tag="PA4992" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253679.1" /db_xref="GeneID:880167" /translation="MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTI PDDREAADLLALARDLGINLIDTAPAYGRSEERLGPLLRGQREHWVIVSKVGEEFVDG QSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREG LIGAYGLSGKTVEGGLRALREGDCAMVTYNLNERAERPVIEYAAAHAKGILVKKALAS GHACLGAGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAAQALKKA" misc_feature 5607728..5608453 /locus_tag="PA4992" /note="Pseudomona aeruginosa PA4992 and similar proteins; Region: AKR_PA4992-like; cd19095" /db_xref="CDD:381321" misc_feature order(5607749..5607754,5608307..5608309,5608313..5608315, 5608355..5608357,5608412..5608423,5608430..5608432, 5608439..5608444) /locus_tag="PA4992" /note="active site" /db_xref="CDD:381321" misc_feature order(5607863..5607865,5607878..5607880,5607947..5607949, 5608070..5608072) /locus_tag="PA4992" /note="catalytic tetrad [active]" /db_xref="CDD:381321" gene 5608649..5609569 /locus_tag="PA4993" /db_xref="GeneID:880233" CDS 5608649..5609569 /locus_tag="PA4993" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253680.1" /db_xref="GeneID:880233" /translation="MPRMLARKDPSAFKTLPLLVEASPDGLVYQALGLPLNFQQMLVR RRRMEVADPQRFVAELANLGVSVRLTLNWQGRDYWVLVRQRRLDRGDTVLKLISGYVP AHELNLPLLTAIQEVAEECLVETAGGWLGGRFGDTWLPTPYQGSLRYRENSHFVLTPL SGAARPVQAGSLRLLERPRAYVHLPTASLQLVYDMRLELPRDAREPSLYHVDERLESG PLVARLDRRRPDLYLLPLDQGRPTGDLFTLRKGQLRPAATRGLWLAESFAVQDGWLVH EERIRFRDWLALWPSSNGDQAGGGRDRASA" gene complement(5609594..5610802) /locus_tag="PA4994" /db_xref="GeneID:880234" CDS complement(5609594..5610802) /locus_tag="PA4994" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_253681.1" /db_xref="GeneID:880234" /translation="MYLETPKKFRSLANQAHQVAENYFRPISRKYDKAEHAYPKELDL LAALLDGMNSGSPEAVGATSASKRAGKQVEEGIKNGGNLSALLGVMELCWGDVGLLLA MPRQGLGNAAIAAVANEEQLQRFGGTWAAMAITEPGCGSDSAAIRTTATQDGDHYVLN GEKIFVTSGERADAVVVWATLNRNLGRAAIKSFVVEKGTPGMTVTRLEKKLGIKASDT ASISFNDCRVPAANLLGNAEVDVQKGFAGVMETFDNTRPLVAGMAVGVAKAALDRTRE LLKKAGCKFDYRKPLLTVSHAEATLYRLEAEWEAARLLTLKAAWMADNKLPNSKEASI AKAKAGRVANEITLKCVELAGALGYAEDELLEKWARDSKILDIFEGTQQIQLLIVARR LLGKSSSQLK" misc_feature complement(5609609..5610802) /locus_tag="PA4994" /note="Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]; Region: CaiA; COG1960" /db_xref="CDD:441563" gene complement(5610851..5612140) /locus_tag="PA4995" /db_xref="GeneID:881679" CDS complement(5610851..5612140) /locus_tag="PA4995" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_253682.1" /db_xref="GeneID:881679" /translation="MPMSTDVQGRALAVLNRVAQADWPDRFNLRKPFEKLLYSGSRTG FRLASERSAKQAKGPRKADPDGLFDLSFSDDQQMLVDMLEGFALEVLRPLAHDADAEA SLPAELLNQALELGLTHYGVGEVHGGMAGERTTVTTALIAEALAKGDLTLAAALLVPL SAANCIRRWGSPSQQAQWLPAFVSEEGAPLTAIAVNEPSLLFDPQKLATRARRKGSHY LLSGEKCLVLRGLEASRLIVAAKTDEGPALFLVEASAKGVERRAEPAMGLKAGGTARL RLKSVKVPADNRLAAEHFDYRAFLDHASLAWCALALGTGQAALDYVIAYCNEREAFGE PISHRQGVAFMVADIAIELDAMRLMVWRACALAERGQPFQREAYLARLLCAEKAMKIG TDAVQLLGGHGFTKEHPAERWYRDLRAVALMAGGLHL" misc_feature complement(5610866..5611936) /locus_tag="PA4995" /note="Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]; Region: CaiA; COG1960" /db_xref="CDD:441563" gene complement(5612268..5613692) /gene="rfaE" /locus_tag="PA4996" /db_xref="GeneID:881680" CDS complement(5612268..5613692) /gene="rfaE" /locus_tag="PA4996" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase" /protein_id="NP_253683.1" /db_xref="GeneID:881680" /translation="MKLSMPRFDQAPVLVVGDVMLDRYWHGATSRISPEAPVPVVRVE QHEDRPGGAANVALNIAALGAQALLVGVTGRDEAADSLANSLKAAGVDARFQRIDSQP TIVKLRVMSRHQQLLRVDFEEPFRTDAAALAVDVESLLAKVKVLVLSDYGKGALQNHQ VLIQAARARNIPVLADPKGKDFAIYRGASLITPNLSEFETIVGRCADEAELVAKGQAL MSELDLGALLVTRGEHGMTLLRHGQPALHLPARAREVFDVTGAGDTVISTLAAALAAG EELPSAVGLANLAAGIVVGKLGTAAISAPELRRAVQREQGSERGVLGLEQLLLAIEDA RAHGEKIVFTNGCFDILHAGHVTYLEQARAQGDRLIVGVNDDASVTRLKGVGRPINSV DRRMAVLAGLGAVDWVVSFAEDTPERLLEQVRPDVLVKGGDYGVEQVVGAQIVKAYGG EVRVLGLVENSSTTAIVEKIRQKG" misc_feature complement(5612277..5613692) /gene="rfaE" /locus_tag="PA4996" /note="bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE; Region: PRK11316" /db_xref="CDD:183085" gene complement(5613733..5615544) /gene="msbA" /locus_tag="PA4997" /db_xref="GeneID:881672" CDS complement(5613733..5615544) /gene="msbA" /locus_tag="PA4997" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transporter MsbA" /protein_id="NP_253684.1" /db_xref="GeneID:881672" /translation="MSDSPQNPGPSSLKIYFRLLGYVKPYIGMFLLSIVGFLIFASTQ PMLAGILKYFVDGLSNPDAALFPNVQWPWLRDLHLVYAVPLLIILIAAWQGLGSFLGN FFLAKVSLGLVHDLRVALFNKLLVLPNRYFDTHSSGHLISRITFNVTMVTGAATDAIK VVIREGLTVVFLFLYLLWMNWKLTLVMLAILPVIAVMVTTASRKFRKQSKKIQVAMGD VTHVASETIQGYRVVRSFGGEAYEEKRFLDASQSNTDKQLRMTKTGAVYTPMLQLVIY VAMAILMFLVLWLRGDASAGDLVAYITAAGLLPKPIRQLSEVSSTVQRGVAGAESIFE QLDEAAEEDQGTVEKERVSGRLEVRNLSFRYPGTDKQVLDDISFIAEPGQMIALVGRS GSGKSTLANLVPRFYQHNDGKILLDGVEVEDYRLRNLRRHIALVTQQVTLFNDSVANN IAYGDLAGAPREEIERAAKAANAKEFIDNLPQGFDTEVGENGVLLSGGQRQRLAIARA LLKDAPLLILDEATSALDTESERHIQAALDEVMKGRTTLVIAHRLSTIEKADLILVMD QGQIVERGSHAELLAQNGHYARLHAMGLDEQAPAPVG" misc_feature complement(5613757..5615502) /gene="msbA" /locus_tag="PA4997" /note="lipid A export permease/ATP-binding protein MsbA; Region: MsbA_lipidA; TIGR02203" /db_xref="CDD:131258" gene 5615652..5616302 /locus_tag="PA4998" /db_xref="GeneID:881673" CDS 5615652..5616302 /locus_tag="PA4998" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253685.1" /db_xref="GeneID:881673" /translation="MRVIDYPSYLQLRDNAEVLEADGHGDKVLRLRDGSFLKLFRRKR LISSAALFPYAERFARNASELARRGIVCPKVLDVLRIPHIQRDAVHYEPLPGQTLRQL DRNDPECGDAVRTQLGELIAALHAKGVYFRSLHLGNVVRTPEGRMGLIDIADLRVQRS ALSAAQRIRNFKHLLRYEQDRTWFLDDSEHLVLKAYLRSSQVHWTLEQLLKQLQLD" misc_feature 5615814..5616248 /locus_tag="PA4998" /note="tRNA A-37 threonylcarbamoyl transferase component Bud32 [Translation, ribosomal structure and biogenesis]; Region: Bud32; COG3642" /db_xref="CDD:442859" gene 5616310..5617515 /gene="waaL" /locus_tag="PA4999" /db_xref="GeneID:881661" CDS 5616310..5617515 /gene="waaL" /locus_tag="PA4999" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="O-antigen ligase WaaL" /protein_id="NP_253686.1" /db_xref="GeneID:881661" /translation="MFAATRLSRLRHDTSRILSHWILPLGWLALLTGMFWVGDRSDYH RLFYILLAAPTLLYVILQPRLLRPLTGSPLFIAFLAFSSYMMLSLSWSTPENSTGSLL KRPLYIALLFFCAAILALEAPLRLKTATWLAALGAVISAAATLLRYYWDANPLRLTGY GALYNPLLSAHVYGAFTALWLAYWMQSRPILAPLPLISLALLGGLLIATGSRTPLVGL TAALMWLVLAGDRKKALIALALALAGALLGYILYPEVITQRGASFRPEIWADALRQIS EHPWLGHGYDHPMRIVLSNGMLLADPHNIELGVLFAGGIIGLLLWVAIYALAFGFSWK NRKSPAVLLASTWLVFGLAAGLTEGNAFLPRPKEHWFLIWIPMALLYALWIQQRFAAS RRGEDIAAP" misc_feature 5616841..5617455 /gene="waaL" /locus_tag="PA4999" /note="O-antigen ligase [Cell wall/membrane/envelope biogenesis]; Region: RfaL; COG3307" /db_xref="CDD:442536" protein_bind complement(5616836..5616848) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(5617534..5618418) /gene="wapR" /locus_tag="PA5000" /db_xref="GeneID:881662" CDS complement(5617534..5618418) /gene="wapR" /locus_tag="PA5000" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="alpha-1,3-rhamnosyltransferase WapR" /protein_id="NP_253687.1" /db_xref="GeneID:881662" /translation="MALVDDGSQPLVSVIIASYNHEKYIEASIASVAAQTYRNVELLV VDDGSSDGSVELLRGLQAKYGFDLRVQQNQGLSRTLNEAITRARGNLIVPFGSDDIML PQRLEKQVAHMWDKPEVGICAGNIEIIDSNGRVMPGKEQRKRDLPFRRLDFDDLFLDR KPGPMAPTLMFRREALEKVGGFDPDIRLEDVYIELAVTKAGYVIDILGEVLAQYRKHP TNTYKNARFMVDNVFKTYSQFSDHPDYEQVIMRFRNSMFLKCSNRDKVLARELLSGLP LKYWNEKTFRGIARLFFS" misc_feature complement(5617759..5618394) /gene="wapR" /locus_tag="PA5000" /note="Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; Region: WcaA; COG0463" /db_xref="CDD:440231" gene complement(5618579..5619535) /locus_tag="PA5001" /db_xref="GeneID:881665" CDS complement(5618579..5619535) /locus_tag="PA5001" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253688.1" /db_xref="GeneID:881665" /translation="MKVLFLVQKEQRAILDRLYDGIAAHCECDTRWLSSEEQADLRGY FRKHVDVSRYDRILFFLRFKKEMRQVRFIRSVPNLVILEHDAYQNYIPCKYTGKFSAH YRRLPWARVISSGHTVSERLRQEGFDAVFVPKGYDQTLLHDLGLARDIELGFVGSTGS VAYSGRKALLDELGGVENLLVTKTKSGEEYLRTLNRIRFFVSADVGMGEYMIKNFEAM ACGCVLLAYDQGERENEALGFRDMENIVLYRSVADIQEKLAILRLDTALAERIARSGQ ALAIERFSFAAVGQSIVEAMRPALREPERPGWLEKTWRRIFT" misc_feature complement(5618645..>5619241) /locus_tag="PA5001" /note="Spore maturation protein CgeB [Cell cycle control, cell division, chromosome partitioning]; Region: COG4641" /db_xref="CDD:443679" gene complement(5619608..5621026) /locus_tag="PA5002" /db_xref="GeneID:881666" CDS complement(5619608..5621026) /locus_tag="PA5002" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253689.1" /db_xref="GeneID:881666" /translation="MSARKQQLLKRHRRNKRIGLLVALLALLAVGLLVSPWLLPILLV ALWVAHEAWFADHLFYSPGEDYRYRFAEGVESLPVRLADGRLRVDGELREGDTLVLGI GVRAGWLGRFLEPSVLLEGGAEADAQAFERGVNGLRYLNLTGLAGPLGEGRIRLRGRH CRLVGEPTLWRARHPDYRDRRVMVIAPHADDAELAAFGLYSQAREAWIVTLTAGEIET EHYRRMGLDGIAAARLKGRLRAWDSQAVPTWGGVPAERCVQLGYFCLQLPAMQANPGE VVPSREADLADIRPFRQFNRLRLASDADGLSTWNNLLADLRELILLARPEVIVLPHPH FDPHPDHVRAQEAVREALQGLDWQPQALLHYANHLHDNDRWPMGDAHMGVSLPPLTEE CSPLLPWTLALERTRQVDKAMALGMMHDLQPRPPFKRRLRRRLQGWLAGRRWPAYGED EFMRKAVRRHELFWVESLDGEA" misc_feature complement(5619698..5620486) /locus_tag="PA5002" /note="N-acetylglucosaminyl deacetylase, LmbE family [Carbohydrate transport and metabolism]; Region: LmbE; COG2120" /db_xref="CDD:441723" gene complement(5621030..5621926) /locus_tag="PA5003" /db_xref="GeneID:881613" CDS complement(5621030..5621926) /locus_tag="PA5003" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253690.1" /db_xref="GeneID:881613" /translation="MLNRLRAFRERGWREVDAPTYAQAWQRFGGSVATHPLVVEQLAE MAGIPVRYLGWESAGELVAAIPTWGRHLALSKDVLKRRGKKGLYDLGNAELILPVAGD ARIALRHAGRYLSALHERNIVTLRPQTEQLAFARAPEDFSKKFRYNQRREVRLVEEAG GQVRQADSFAPAEFAAIYLELFQRRWGFPATGAERMAEVFERLRELLRGSVLLLNDQP IAVQVLYRAEAPGWLSVEYINGGVDPQTREFSPGSVLSYLNTQAAWEDARALGKPLRY SFGRADREYKDRWCHPSPVFQV" misc_feature complement(5621033..5621824) /locus_tag="PA5003" /note="Region: Mig-14; pfam07395" /db_xref="CDD:284747" gene complement(5621920..5623056) /locus_tag="PA5004" /db_xref="GeneID:881614" CDS complement(5621920..5623056) /locus_tag="PA5004" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glycosyl transferase family protein" /protein_id="NP_253691.1" /db_xref="GeneID:881614" /translation="MTRSAEPRVLQFCHGYDGPFLDCARQYASLFAGTPYKVTTVFLT GRSDPEVAARCASDEVLFLEYGSRDIRGLKLKAIRDLREIARSRDFRFCIAHRFKPIW IASLATRLPIVGVHHAFGDYQRLSRKVFAGLMSKRLSLLAVSDAVRDDIRRCLPKWPA ERIETLYNRIDVAALQAEQVERLSARRQLRLPDEAWVVGNVGRLHPDKDQATLLRGFA AALPRLPQNSLLAILGSGRLEEQLKDLACELGIGERVLFLGQVEEARRYFKAFDAFAL SSDHEPFGMVLLEAMVAGVPLIATACGGAREVVEGVGILFPLGDETALAEGLTHLAAL DRRQREACARLMLERLETRFSDAAVRREFWRLPTIAGFASESAC" misc_feature complement(5622025..5623035) /locus_tag="PA5004" /note="family 4 and family 28 glycosyltransferases similar to Klebsiella WabH; Region: GT4_GT28_WabH-like; cd03811" /db_xref="CDD:340839" misc_feature complement(order(5622199..5622201,5622265..5622267, 5622448..5622456,5623000..5623002)) /locus_tag="PA5004" /note="putative ADP-binding pocket [chemical binding]; other site" /db_xref="CDD:340839" gene complement(5623040..5624797) /locus_tag="PA5005" /db_xref="GeneID:881615" CDS complement(5623040..5624797) /locus_tag="PA5005" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="carbamoyl transferase" /protein_id="NP_253692.1" /db_xref="GeneID:881615" /translation="MALTVLGLSGAVSHDPSAALYIDGKLVAAVEEERFVRDKHAKNR MPYESAKFCLEQAGIEPADVDVVAIPFAPISIMEKARWHYAKRYAYAPDRALDAILLG NRRYKRYYKRIEWCLQQLGFDLKKIKIQPVEHHLAHASSAYHCSGFKEKTAILGIDGK GEYATTFFGWGENGRIHKIKEFYDPDSLGGLYGAITEYLGFDMLDGEFKVMGMAPYGD ASKYDFSRLAKFENGELVINTDYANVIGFRRYKEKGKGYYFSPKLIEWLGPKREGDIA DDPYIHYAASIQALFEKLALEMMDYYLGDIIRETGKVAFAGGCALNVKLNQKIISRPE VKELFVQPAASDAGTAVGAAAYVSHQRGVPVEKMEHVYLGPEYSNEDVIAACARHEAR PQWQKIHNRSRRIGRILADGNPVAWFQGRMEFGPRALGGRSILGCPSVPGVADRINAQ IKFRERWRPFCPSMLDTVGPQMFKIDHPAPFMTFTFEVNEEWKERVPEVVHEDGTSRA QVLKREYNPRYYDLMKELENLTGNGVALNTSLNRRGEPMICSPTDALNMFFGSDLQYL IMEDILVVKEGVDWYDSVG" misc_feature complement(5623061..5624788) /locus_tag="PA5005" /note="Predicted carbamoyl transferase, NodU family [General function prediction only]; Region: COG2192" /db_xref="CDD:441795" gene complement(5624901..5626379) /locus_tag="PA5006" /db_xref="GeneID:881607" CDS complement(5624901..5626379) /locus_tag="PA5006" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253693.1" /db_xref="GeneID:881607" /translation="MRLAELQAAGRQPQLPLRVTLADGAGAAELRLDSLLRVLPGQRY VGAGEWRGRKVLAKLLVGGKAARHFQRELEGARLLAAQGLTTPALLADGLQQGEGGWL LFDYLDAAQSLGDAWRAVEAQAPLGDAQQAVLGEALAAIGELHAKGLWQDDLHLDNLL RHAGRLYLIDGGGVRAETPGQPLSRQKVLENLGVFFAQLPALLDPFLEELLVHYLLAN GEHALPLEALQKEIAKVRRWRVRDLLRKVGRDCSLFSVVRGPFRLFAARRSEAETMAP LLADADRLIAAGHVYKDGGAATVARVEANGRTLIIKRYNIKGWVHWLKRFWRPSRAWA SWREGNRLEFLGIATARPLAMLERRWCWLRGRAYLITDYLGGQDIIARFKPCLDMPDG AVSPPEAELAALDRLFSTLIRERISHGDLKGHNLFWQAHEQGGEWALIDLDAMRKHHS QASFARAYARDRARFLRNWPQDSGLYRLLEQRIPRLGDAAGA" misc_feature complement(5625663..5626169) /locus_tag="PA5006" /note="tRNA A-37 threonylcarbamoyl transferase component Bud32 [Translation, ribosomal structure and biogenesis]; Region: Bud32; COG3642" /db_xref="CDD:442859" misc_feature complement(5625051..>5625416) /locus_tag="PA5006" /note="The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases; Region: Protein Kinases, catalytic domain; cl21453" /db_xref="CDD:473864" gene complement(5626376..5627134) /locus_tag="PA5007" /db_xref="GeneID:881608" CDS complement(5626376..5627134) /locus_tag="PA5007" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253694.1" /db_xref="GeneID:881608" /translation="MSVFIAAQDHDLLQRNRLDSFDALWALQLDAVDEPNTERGGWSS VYRLDLGDSAYYLKRQSNHLTRSLRHPLGEPTFAREFRNIERYRALGIPALQAAFFAQ QAVGGERQAILLTRALDGWQDLDTWLASWHDLAEERRRAILRAVGRLARQLHAAGQMH GCFYPKHVFLREGADGVFEACLIDLEKTRPIWFGRRDQVKDLEPMLRRAPDWSEADVH EFISAYVDEPLDSAEVEQWYRLLDQRRRRKESRR" misc_feature complement(5626463..5627068) /locus_tag="PA5007" /note="Lipopolysaccharide kinase (Kdo/WaaP) family; Region: Kdo; pfam06293" /db_xref="CDD:428872" gene complement(5627131..5627865) /locus_tag="PA5008" /db_xref="GeneID:881539" CDS complement(5627131..5627865) /locus_tag="PA5008" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253695.1" /db_xref="GeneID:881539" /translation="MAGWTLEPDYRHLAADFGSLDSVFALEGERLTRDPLSEVIRIER DGVRYYVKRYRSAGKGLRRYLARPRIKAEWQNLKRFEKWGIPTAEVVAWGLERKAGAF QRGAMITRELPGTEDLSVLACNRDPRLKDPRWVDGVSRQIAKATRLMHDQHFTHNDLK WRNLLVDDQPLVYFIDCPNGAFWWSFMLRYRITKDLACLDKVAKYHLSRTQRLRFYLQ YRRRRHLNESDKKRIRQVVAFFEGRE" misc_feature complement(<5627338..5627790) /locus_tag="PA5008" /note="The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases; Region: Protein Kinases, catalytic domain; cl21453" /db_xref="CDD:473864" misc_feature complement(<5627164..>5627415) /locus_tag="PA5008" /note="Thiamine kinase or a related kinase [Coenzyme transport and metabolism]; Region: CotS; COG0510" /db_xref="CDD:440276" gene complement(5627865..5628671) /gene="waaP" /locus_tag="PA5009" /db_xref="GeneID:881540" CDS complement(5627865..5628671) /gene="waaP" /locus_tag="PA5009" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="lipopolysaccharide kinase WaaP" /protein_id="NP_253696.1" /db_xref="GeneID:881540" /translation="MRLVLEEPFKRLWNGRDPFEAVEALQGKVYRELEGRRTLRTEVD GRGYFVKIHRGIGWGEIAKNLLTAKLPVLGARQEWQAIRRLHEAGVATMTAVAYGERG SDPARQHSFIVTEELAPTVDLEVFSQDWRERPPPPRLKRALVEAVARMVGDMHRAGVN HRDCYICHFLLHTDKPVSADDFRLSVIDLHRAQTRDATPKRWRNKDLAALYFSALDIG LTRRDKLRFLRTYFRRPLREILRDEAGLLAWMERKAEKLYERKQRYGDLL" misc_feature complement(5627868..5628671) /gene="waaP" /locus_tag="PA5009" /note="lipopolysaccharide core heptose(I) kinase RfaP; Provisional; Region: PRK15123" /db_xref="CDD:237915" gene complement(5628668..5629789) /gene="waaG" /locus_tag="PA5010" /db_xref="GeneID:881532" CDS complement(5628668..5629789) /gene="waaG" /locus_tag="PA5010" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="UDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase WaaG" /protein_id="NP_253697.1" /db_xref="GeneID:881532" /translation="MTLAFILYKYFPFGGLQRDFMRIALECQRRGHDIRVYTLIWEGD VPDGFEVLVAPVRSIFNHRRNEKFTAWVRADLDRRPVQRVIGFNKMPGLDVYYAADAC FEEKAQTLRNPLYRQWGRYRHFAGYERAVFDPASKTEILMISEVQQPLFVKHYGTQAE RFHLLPPGISQDRRAPANAADVRAEFRREFGLEEDDLLLVQIGSGFKTKGLDRSLKAL SALPKALRRRTRLIAIGQDDPKPFLLQIAALGLNDQVQILKGRSDIPRFLLGADLLIH PAYNENTGTVLLEALVSGLPVLVTDVCGYAHYIAEADAGRVLPSPFEQDSLNRLLAEM LEDAPARAAWSRNGLAYADHADLYSMPQRAADLILGEAS" misc_feature complement(5628686..5629783) /gene="waaG" /locus_tag="PA5010" /note="phosphatidyl-myo-inositol mannosyltransferase; Region: GT4_PimA-like; cd03801" /db_xref="CDD:340831" gene complement(5629786..5630853) /gene="waaC" /locus_tag="PA5011" /db_xref="GeneID:881533" CDS complement(5629786..5630853) /gene="waaC" /locus_tag="PA5011" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="heptosyltransferase I" /protein_id="NP_253698.1" /db_xref="GeneID:881533" /translation="MRVLLVKTSSLGDVIHTLPALTDAARAIPGIQFDWVVEEGFAEI PAWHPAVARVIPVAIRRWRKNLWQTLRNGEWRRFKQRLKEVDYDLVIDAQGLLKSAWL TRYVGKTPVAGLDRDSAREPLASRFYRRAYPVAWGQHAVERTRQLFAQALDYPLPESV GDYGLDREQLADADPGAPYLVFLHGTTWVTKHWPEAYWRELAERMCERGWSVRLPWGS AAERERAGRLAAGLENAAVLPRLSLAGMAKVLAGARACVAVDTGLGHLAAALDVPTLS LFGPTNPGFTGAYGRSQVHLGSDFPCAPCLKKTCTYQPTEEDRKLFDLKREQPLCFTR LNPQRVATQLEAMLLAPETLR" misc_feature complement(5629966..5630853) /gene="waaC" /locus_tag="PA5011" /note="glycosyltransferase family 1 and related proteins with GTB topology; Region: Glycosyltransferase_GTB-type; cl10013" /db_xref="CDD:471961" misc_feature complement(order(5630056..5630058,5630065..5630070, 5630077..5630079,5630113..5630118,5630209..5630211, 5630305..5630310)) /gene="waaC" /locus_tag="PA5011" /note="putative active site [active]" /db_xref="CDD:340821" gene complement(5630850..5631887) /gene="waaF" /locus_tag="PA5012" /db_xref="GeneID:881422" CDS complement(5630850..5631887) /gene="waaF" /locus_tag="PA5012" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="heptosyltransferase II" /protein_id="NP_253699.1" /db_xref="GeneID:881422" /translation="MRILIVGPSWVGDMVMAQTLFQCLRQRHPECVIDVLAPEWSRPI LERMPEVRQALSFPLGHGVMDVATRRRIGRGLRGQYEQAILLPNSLKSALVPWFAGIP KRTGWRGEMRYGLLNDIRKLDKQRYPLMIERFMALAFEPGVELPKPYPQPRLRIDDGS RQAALDKFALSLDRPVLALCPGAEFGEAKRWPAEHYAAVAEAKIRAGWQVWLFGSKND HPGGEEIRQRLIPGLREESFNLAGETSLAEAIDLMSCAGAVVSNDSGLMHVAAALDRP LVGVYGSTSPQFTPPLADRVEIVRLGLECSPCFERTCRFGHYNCLRELPPGLVLQALE RLVGDPAEVAG" misc_feature complement(5630880..5631884) /gene="waaF" /locus_tag="PA5012" /note="lipopolysaccharide heptosyltransferase II; Region: heptsyl_trn_II; TIGR02195" /db_xref="CDD:274026" misc_feature complement(order(5631081..5631083,5631090..5631095, 5631102..5631104,5631138..5631143,5631249..5631251, 5631348..5631353)) /gene="waaF" /locus_tag="PA5012" /note="putative active site [active]" /db_xref="CDD:340821" gene complement(5631947..5632870) /gene="ilvE" /locus_tag="PA5013" /db_xref="GeneID:881423" CDS complement(5631947..5632870) /gene="ilvE" /locus_tag="PA5013" /EC_number="2.6.1.42" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="branched-chain amino acid aminotransferase" /protein_id="NP_253700.1" /db_xref="GeneID:881423" /translation="MSMADRDGVIWYDGELVQWRDATTHVLTHTLHYGMGVFEGVRAY DTPQGTAIFRLQAHTDRLFDSAHIMNMQIPYSRDEINEATRAAVRENNLESAYIRPMV FYGSEGMGLRASGLKVHVIIAAWSWGAYMGEEALQQGIKVRTSSFTRHHVNISMTRAK SNGAYINSMLALQEAISGGADEAMMLDPEGYVAEGSGENIFIIKDGVIYTPEVTACLN GITRNTILTLAAEHGFKLVEKRITRDEVYIADEAFFTGTAAEVTPIREVDGRKIGAGR RGPVTEKLQKAYFDLVSGKTEAHAEWRTLVK" misc_feature complement(5631953..5632867) /gene="ilvE" /locus_tag="PA5013" /note="branched-chain amino acid transaminase; Region: PRK06606" /db_xref="CDD:235841" misc_feature complement(order(5632310..5632312,5632352..5632354, 5632364..5632366,5632370..5632372,5632385..5632387, 5632508..5632510,5632532..5632534,5632544..5632552, 5632568..5632570,5632574..5632576,5632667..5632669, 5632757..5632759,5632763..5632765,5632769..5632783, 5632790..5632804)) /gene="ilvE" /locus_tag="PA5013" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:238798" misc_feature complement(order(5632100..5632102,5632208..5632213, 5632289..5632291,5632376..5632378,5632391..5632393, 5632538..5632540,5632688..5632690,5632757..5632759, 5632772..5632774)) /gene="ilvE" /locus_tag="PA5013" /note="substrate-cofactor binding pocket [active]" /db_xref="CDD:238798" misc_feature complement(5632391..5632393) /gene="ilvE" /locus_tag="PA5013" /note="catalytic residue [active]" /db_xref="CDD:238798" gene complement(5632926..5635874) /gene="glnE" /locus_tag="PA5014" /db_xref="GeneID:881325" CDS complement(5632926..5635874) /gene="glnE" /locus_tag="PA5014" /EC_number="2.7.7.42" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase" /protein_id="NP_253701.1" /db_xref="GeneID:881325" /translation="MSLPSLANLPATLLPAAERAGTALRSAVAALDAAALARLEAWPE ERLEDFRRVAAASDFVAEQAVRDSAMLLELAERGELENPHAPGELRSQLQARLEDCAD EDELGRRLRRFRTRQQLRIIWRDLTRRAALAETCRDLSALADACIDLACEWLHRRQCE QFGTPIGRRSGEPQRMVVLGMGKLGAVELNLSSDIDLIFGYPEGGETEGAKRSLDNQE FFTRLGQKLIKALDAITVDGFVFRVDMRLRPYGSSGPLVYSFAALEQYYQDQGRDWER YAMIKARVVGGDQQAGEQLLGMLRPFVYRRYLDFSAIEALRTMKQLIQQEVRRKGMSE NIKLGEGGIREVEFIAQAFQLIHGGRDLSLQQRPLLKVLATLEGQGYLPPAVVEELRG GYEFLRYAEHAIQALADRQTQMLPSDEYDRIRVAFIMGFASWAAFHERLSHWRARIDW HFRQVIADPDEDESGEAACGSVGAEWIPLWEEALDEESASRQLADAGFVDAEAAWKRL SDLRHGPQVRAMQRLGRERLDAFVPRLLAMTVENPQPDLVLERVLPLVEAVARRSAYL VLLTENPGALERLLTLCAASPMVAEQIARFPILLDELLNEGRLFRPPQAAELAAELRE RLMRIPEDDLEQQMETLRHFKLAHGLRVAASEIAGTLPLMKVSDYLTWLAEAILVEVL ELAWRQLVQRHGRPLRADGTPCDPDFVIVGYGKVGGLEFGHGSDLDLVFIHDGDPQCE TDGGKSIDGAQFFTRLGQKIIHFLTAQTPSGTLYEVDMRLRPSGAAGLLVSSLGAFQR YQEQEAWTWEHQALVRARVLAGCRRVQASFEAVRAEVLARPRDLDALRTEVSEMRAKM RDNLGTRATAAGTASNAFEATAAFDLKHDAGGIVDIEFMVQYAVLAWSGEHPALLEFT DNIRILEGLERAGLIASEDVRLLQEAYKAYRAAAHRLALQKEAGVVSGEHFQTERREV IRIWRELRLG" misc_feature complement(5632938..5635847) /gene="glnE" /locus_tag="PA5014" /note="bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase; Region: PRK11072" /db_xref="CDD:236836" gene 5636156..5638804 /gene="aceE" /locus_tag="PA5015" /db_xref="GeneID:881326" CDS 5636156..5638804 /gene="aceE" /locus_tag="PA5015" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase subunit E1" /protein_id="NP_253702.1" /db_xref="GeneID:881326" /translation="MQDLDPVETQEWLDALESVLDREGEDRAHYLMTRMGELASRSGT QLPYAITTPYRNTIPVTHEARMPGDLFMERRIRSLVRWNALAMVMRANKHDPDLGGHI STFASSATLYDIGFNYFFQAPTDEHGGDLVFFQGHASPGVYARAFLEGRISEEQLENF RQEVDGNGLSSYPHPWLMPDFWQFPTVSMGLGPIQAIYQARFMKYLESRGFIPAGKQK VWCFMGDGECDEPESLGAISLAGREKLDNLIFVINCNLQRLDGPVRGNAKIIQELEGV FRGAEWNVNKVIWGRFWDPLFAKDTAGLLQQRMDEVIDGEYQNYKAKDGAYVREHFFG ARPELLEMVKDLSDEEIWKLNRGGHDPYKVYAAYHQAVNHKGQPTVILAKTIKGYGTG SGEAKNIAHNVKKVDVDSLRAFRDKFDIPVKDADLEKLPFYKPEEGSAEAKYLAERRA ALGGFMPVRRQKSMSVPVPPLETLKAMLDGSGDREISTTMAFVRIISQLVKDKELGPR IVPIVPDEARTFGMEGMFRQLGIYSSVGQLYEPVDKDQVMFYREDKKGQILEEGINEA GAMSSWIAAGTSYSTHNQPMLPFYIFYSMFGFQRIGDLAWAAGDSRAHGFLIGGTAGR TTLNGEGLQHEDGHSHLLASTIPNCRTYDPTYAYELAVIIREGSRQMIEEQQDIFYYI TVMNENYVQPAMPKGAEEGIIKGMYLLEEDKKEAAHHVQLLGSGTILREVEEAAKLLR NDFGIGADVWSVPSFNELRRDGLAVERWNRLHPGQKPKQSYVEECLGGRRGPVIASTD YMKLYAEQIRQWVPSKEYKVLGTDGFGRSDSRKKLRNFFEVDRHWVVLAALEALADRG DIEPKVVAEAIAKYGIDPEKRNPLDC" misc_feature 5636156..5638795 /gene="aceE" /locus_tag="PA5015" /note="Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]; Region: AceE; COG2609" /db_xref="CDD:442021" gene 5638949..5640592 /gene="aceF" /locus_tag="PA5016" /db_xref="GeneID:881297" CDS 5638949..5640592 /gene="aceF" /locus_tag="PA5016" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="dihydrolipoamide acetyltransferase" /protein_id="NP_253703.1" /db_xref="GeneID:881297" /translation="MSELIRVPDIGNGEGEVIELLVKPGDKVEADQSLLTLESDKASM EIPSPKAGVVKSIKAKVGDTLKEGDEILELEVEGGEQPAEAKAEAAPAQPEAPKAEAP APAPSESKPAAPAAASVQDIKVPDIGSAGKANVIEVMVKAGDTVEADQSLITLESDKA SMEIPSPASGVVESVSIKVGDEVGTGDLILKLKVEGAAPAAEEQPAAAPAQAAAPAAE QKPAAAAPAPAKADTPAPVGAPSRDGAKVHAGPAVRMLAREFGVELSEVKASGPKGRI LKEDVQVFVKEQLQRAKSGGAGATGGAGIPPIPEVDFSKFGEVEEVAMTRLMQVGAAN LHRSWLNVPHVTQFDQSDITDMEAFRVAQKAAAEKAGVKLTVLPILLKACAHLLKELP DFNSSLAPSGKALIRKKYVHIGFAVDTPDGLLVPVIRDVDRKSLLQLAAEAADLADKA RNKKLSADAMQGACFTISSLGHIGGTGFTPIVNAPEVAILGVSKATMQPVWDGKAFQP RLMLPLSLSYDHRVINGAAAARFTKRLGELLADIRTLLL" misc_feature 5638955..5640589 /gene="aceF" /locus_tag="PA5016" /note="pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; Region: PDHac_trf_long; TIGR01348" /db_xref="CDD:273566" gene 5641010..5643709 /locus_tag="PA5017" /db_xref="GeneID:881298" CDS 5641010..5643709 /locus_tag="PA5017" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253704.1" /db_xref="GeneID:881298" /translation="MKSHPDAASRSAAEVVTQLPVPSRLGLLRFERLNEPSWALLFLD PACERQLGLPATTLCALLDAPYASLMEPEARHRLHEQIQQQLVKRPHYQVSYKLHTPN GVLTMLEFGEAFQQHGRQLLHGYLMVEERAESAERSEQLLDLESQNLRLKASLDLYQR SQDDHLQHLLRSRTQQNLIVRLARHRYLSSDPLLEAAQLITQAACEAYGTARAGIWRL LDDQRLEAVTVYRRDLDQYEKPQSIDASRYPAYLEAVHSGRAIDAHNAQRDPRTQELY KDYLRPLGVNALLDATIRIGGEVVGVLCLEHAGENRMWQSDEIAFAGELADQYAQVLM NHERRNVSSALHLFQRAVEQSASAFLLIDRDGVVEYVNPSFTSITQYSADEVRNRRLS ELPALENLSELLFDARSALTQQNSWQGEFRSRRKNHEPYWGQLSLSKVYDDLGELTHY IGIYEDITQNKLAQQHIEKLAYRDNLTGLANRHYFIGALEERLESSGDRPLSLLLVDI DNFKRINDSLGHQTGDKLLVSLARRLRSCLGDGATLARFASNEFAVLLDDTAVEKGES IAAQVLHMLDKPLFVDNQLINITGSIGLASAPQHGCDPQTLMKYAGLALHKAKANGKH QVQVFTEALTAEASYKLFVESNLRRALAQNELAVHYQPKLCLRSGQLLGLEALLRWQH PEKGMIRPDRFISVAEETGLIVPIGKWVIREACRQARELAEAGLGELQIAINLSPKQF TDPDLVGSIAAILHEENIPASQLELELTESLLLDATDDTRQQLERLKSLGLTLAMDDF GTGYSSLSYLKKFPIDVIKIDRSFIKDIPDSQDDMEITSAVIAMAHNLKLKVVAEGVE SAEQLAFLRRNRCDIGQGYLFDRPIPSDLLNTSLLRYPCRTLH" misc_feature 5641736..5643661 /locus_tag="PA5017" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" gene 5643803..5644450 /gene="msrA" /locus_tag="PA5018" /db_xref="GeneID:881240" CDS 5643803..5644450 /gene="msrA" /locus_tag="PA5018" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="peptide methionine sulfoxide reductase" /protein_id="NP_253705.1" /db_xref="GeneID:881240" /translation="MVLRSEILTKKSELPTPDQALPGRESAMPVPEAHFVNGRPLTAP FPAGLQQVLFGMGCFWGAERRLWQQPGVWVTAVGYAGGYTPNPTYDEVCSGLTGHSEV VLVVYNPQETSFEQLLKVFWEAHDPTQGMRQGGDIGTQYRSVIYTFDAAQKAAAMASR ESFQAELAKAGYDRITTEIADVPPFYYAEAYHQQYLAKNPNGYCGLGGTGVCLPA" misc_feature 5643938..5644441 /gene="msrA" /locus_tag="PA5018" /note="Peptide methionine sulfoxide reductase MsrA [Posttranslational modification, protein turnover, chaperones]; Region: MsrA; COG0225" /db_xref="CDD:439995" gene complement(5644454..5645290) /locus_tag="PA5019" /db_xref="GeneID:881241" CDS complement(5644454..5645290) /locus_tag="PA5019" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253706.1" /db_xref="GeneID:881241" /translation="MNYRHAYHAGNHADVFKHLVLARIFALLGRKDTPYAYLDSHSGV GLYDLQGDEASRTGEWEQGIARLWEREGLPEQLDDYLDVIRHLNPDGSLRYYPGSPEL ARRLTRAQDRVLLNELHPEDGRLLKANMAGERRVAVHQGDGWLLPRAFLPAPEKRAVL LIDPPFEQADELQRCVAALDEAIGRMRQTVVVIWYPIKDQRQLKRFYQALERSVAPKL LRAELHVHPIDDAERFNGSGLAIVNPPWPLEDELRDLLPWLAEVMAQSQGGWRLDWLV AE" misc_feature complement(5644463..5645290) /locus_tag="PA5019" /note="23S rRNA A2030 N6-methylase RlmJ [Translation, ribosomal structure and biogenesis]; Region: RlmJ; COG2961" /db_xref="CDD:442201" gene 5645593..5647395 /locus_tag="PA5020" /db_xref="GeneID:881271" CDS 5645593..5647395 /locus_tag="PA5020" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_253707.1" /db_xref="GeneID:881271" /translation="MSETLLSSRNLAFELYEVLDAEALTQRPRFAEHSRETFDAALGT ARSLAEKLFAPHNRKGDEHEPLYENGSATLIPEVKPAVDAFLDAGFLNATRSFEQGGM QLPTLLSQACFAHFQAANVGSSAYPFLTMGAANLIESFGSEEQKQRFLQPMIEGRFFG TMALTEPHAGSSLSDIRTRAEPAADGSYRIKGNKIFISGGDHPLSENIVHMVLAKLPD APPGVKGISLFIVPKFLVNADGSLGPRNDVILAGLFHKMGYRGTTSTALNFGDNGACV GYLVGKPHHGLAYMFQMMNEARIGVGMGAVMLGYAGYLYSLEYARERPQGRLPDGKDP SAPQVAIIRHADVRRMLLTQKAYVEGAFDLGLYAARLFDDSQTLEDDEQRRQAHDLLD LLTPIVKSWPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSL DLLGRKVGQNNGAGLRQLTRLIQDACRRAEAHPSLVALRQPLERLVARLSEVTLALLG DLMQGQVNQGLANSALYLKVFGHAVIGWRWLEQAIRAEEGLARGDCADADFYRGKLQA ARYFLTWEVPGCHHELALLEARDDVCSSMQEEWF" misc_feature 5645617..5645694 /locus_tag="PA5020" /note="Acyl-CoA dehydrogenase N terminal; Region: AcylCoA_DH_N; pfam12418" /db_xref="CDD:463571" misc_feature 5645713..5646966 /locus_tag="PA5020" /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933" /db_xref="CDD:447864" misc_feature order(5645986..5645988,5646076..5646078,5646082..5646084, 5646178..5646180,5646184..5646186,5646910..5646918, 5646922..5646924,5646928..5646930) /locus_tag="PA5020" /note="active site" /db_xref="CDD:173842" misc_feature 5647006..5647377 /locus_tag="PA5020" /note="Acetyl-CoA dehydrogenase C-terminal like; Region: Acyl-CoA_dh_C; pfam12806" /db_xref="CDD:463716" gene 5647814..5649430 /locus_tag="PA5021" /db_xref="GeneID:881272" CDS 5647814..5649430 /locus_tag="PA5021" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sodium/hydrogen antiporter" /protein_id="NP_253708.3" /db_xref="GeneID:881272" /translation="MIAGNDGVGGIVFDNYPMAYLVGNLALAVILLDGGLRTRVSSFR VALWPALSLATLGVLVTTGLTGIAAAWLFDLHWMEGLLIGAIVGSTDAAAVFSLLGGK GLNERVTATLEIESGSNDPMAVFLTVTLIEMLASGQTGLSWGFALHLVQQFGLGALLG LGGGWLLLQLINRMHLAGGLYPLLVISGGLLVFALANAVGGSGILAIYLCGLLLGNRP IRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLWPIALPALALALWMILVARPLSV LIGLIPFRAFHDREKAFIAWVGLRGAVPIILAVFPLMAGLPNAQLFFNVAFFIVLVSL LVQGTSLPWAARLLRVVVPPDPAPISRAGLEIHPTSEWELFVYHLNKEKWCIGAALRE LKMPGGTRIAALFRGTELLHPSGSTILEADDILCVIGHEHDLPALGKLFSQAPDRGLG ARFFGDFVLEGDAQLSAVASLYGLKLDGIDGEQALGRFIAHEIGGEAVIGDQVEWNGL TWTVAALEGNRIRKVGVKFPEGRPGPGLFL" misc_feature 5647814..5649394 /locus_tag="PA5021" /note="potassium/proton antiporter; Region: PRK05326" /db_xref="CDD:235410" gene 5649522..5652878 /locus_tag="PA5022" /db_xref="GeneID:881258" CDS 5649522..5652878 /locus_tag="PA5022" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="potassium efflux protein KefA" /protein_id="NP_253709.1" /db_xref="GeneID:881258" /translation="MPALRSLIAILFLGLCLASPPLLAQSEPPSAEAVQQSLDKLAER KLAEADQKVAKASLEQTLKFLAARDEALQSLEDLKKRLSDAPRQIEENQRELERLKKT KERPVSERYSGESAARLEMLLNDRTTQQAEWQKALGEANSLSITAETRPERAQAGISS MQARILEIGSLLKAGKESGKTINADRRGELLAEQAALTVQSQLLRQELAGNNLLQDLG KSQHDLLTEKISRLEKETLDLQALISEKRREQSEKTVAELSKEGAQGAGTDSLLSQEN AKNLRLSDYLLRATDRLNVLTRRNLETKQQLDNLTQSNQALEEQINVLRGSLLLSRIL YKQKQALPKIKADQSLADEIADLRLGQFELNQERDKLATPQQYLDDLLAQQPSEQVTP ELRKDLDTLLATRSELLERLNHELNALLNEAITLQLNQKQLLSTSESLRTTLDEQMFW IPSNQPLDLSWFKMTPTLLKNQLTEIPWGSGVRELGEGLVDRPLLFLPLFLLIAALLW KRRYLYDKLAELNDDIGHFKRDSQLHTPLAILITILLALPGTLTFAVAGLALLLDARG QNATLGSALLEMAQVWLLFYTAHRILTPGGIAERHFHWSREQVGFLDRHLVRLGVVVL ALVGVVTVAEHQPASLADDVIGIAVVLLGYAAMAWLLSRLLFSSPGDERPSLIKMIVG ILFTALPLVLFVAVCFGYYYTSLKLTDRLIDTLYLLLLWFVIEAAFVRGLGVAARRLA YARALAKRQNAAKEGVDGETNVEEPTLGIEQINQQSLRLIRLALLIGFIVCLYWVWAD LISVISYLDNVTLYQYTAGTGEAATSVPISLRDFLAALAIAVVTVALARNLPGLLEVL VLQRLTLAQGSAYATTTLLSYAISGIGIVSALSTLGVSWDKLQWLVAALSVGLGFGLQ AIFSNFVSGLIILFERPVRIGDVVTIGNLSGTVSRIRIRATTITDFDRKEIIVPNQTF ITGQLVNWSLSDTVTRVTIKIGLAYETDLPLARKLMMQAVKENPRVLRDPEPLLYFLT ISASTFDYELRFHVRELGDRNPSTDEILTKIATSFREHKIDMAFNQVDVFVKNLQGQQ VQLFVGEPQHSGVGNPPALKGQDGPAEPTR" misc_feature 5649522..5652845 /locus_tag="PA5022" /note="mechanosensitive channel MscK; Region: PRK11281" /db_xref="CDD:236892" gene 5652945..5654405 /locus_tag="PA5023" /db_xref="GeneID:881259" CDS 5652945..5654405 /locus_tag="PA5023" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253710.1" /db_xref="GeneID:881259" /translation="MKSLDDLDFDNRFARLGGAFSTEVLPDPIAEPRLVVASPAALAL LDLPAETSDEALFAELFGGHKLWSEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVIN QAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALPALGIPSSRALCVIGSS TPVWREKKESAATLLRLAPSHVRFGHFEYFYYTRQHDQLKQLAAFVLEHHFADCNAAE RPYAAMFRQVVERNAELIARWQAYGFCHGVMNTDNMSILGITFDYGPYAFLDDFDANH ICNHSDDAGRYSFSNQVPIAHWNLAALAQALTPLVEVDELRASLDLFLPLYQAHYLDL MRRRLGLGVAAENDHALVQELLQRMQGSAVDYSLFFRRLGEETPERALASLRDDFVDR EAFDRWAEAYRRRVEEEGGDQESRRRRMHAVNPLYVLRNYLAQQAIEAAEQGDYTEVR LLHQVLSRPFEEQPGMERFTRRPPDWGRHLEISCSS" misc_feature 5652945..5654402 /locus_tag="PA5023" /note="YdiU family protein; Region: PRK00029" /db_xref="CDD:234583" gene 5654556..5655527 /locus_tag="PA5024" /db_xref="GeneID:881204" CDS 5654556..5655527 /locus_tag="PA5024" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253711.2" /db_xref="GeneID:881204" /translation="MKIRDLDLSQSSINTEHQALGLPPVEDFVTHPDDHPVLRAAMWA AVLILVGLLAFLAWRLFFDNGGSSGFEIIEQALTSRGFWSAVAVGFFAQVIDGALGMA YGITATTFLLSAGATPAAASASVHIAEVFTTGFSGISHVKLGNVNKSLFLRLLLPGMI GAVLGAVLITRFDGHQLKPFISAYLLLMGLYILSKAYRHVIKRRAPRHVAKLALFGGF VDAAGGGWGPVVTSSLIGSGSDPRTTIGSVNFAEFFLTIASATSFILLAGQPDTWKMV AGLVFGGLFAAPFAALLCKKLSPRTLLVIVGTLITLISAYNIYIGLR" misc_feature 5654799..5655521 /locus_tag="PA5024" /note="Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family [Inorganic ion transport and metabolism]; Region: TauE; COG0730" /db_xref="CDD:440494" gene 5655648..5656925 /gene="metY" /locus_tag="PA5025" /db_xref="GeneID:881205" CDS 5655648..5656925 /gene="metY" /locus_tag="PA5025" /EC_number="2.5.1.49" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="O-acetylhomoserine aminocarboxypropyltransferase" /protein_id="NP_253712.1" /db_xref="GeneID:881205" /translation="MKLETLAVHAGYSPDPTTRAVAVPIYQTTSYAFDDTQHGADLFD LKVPGNIYTRIMNPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTVAEAGDNIVS VAKLYGGTYNLLAHTLPRIGIQARFAAHDDVAALEALIDERTKAVFCETIGNPAGNII DLQALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYMGGHGTSIGGIVV DSGKFDWAANKSRFPLLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFN AFLILQGLETLALRMERHCDNALAVARYLQQHPQVAWVKYAGLADNPEHALARRYLGG RPAAILSFGIQGGSAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNAEELAR AGVSDDMVRLSIGIEHIDDILADLDQALAAAAR" misc_feature 5655648..5656883 /gene="metY" /locus_tag="PA5025" /note="bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; Region: PRK06084" /db_xref="CDD:180392" misc_feature order(5655726..5655737,5655741..5655746,5655801..5655803, 5655807..5655809,5655885..5655890,5655894..5655899, 5655966..5655968,5655981..5655983,5655990..5655992, 5656254..5656256,5656278..5656280,5656284..5656286, 5656431..5656433,5656464..5656466,5656470..5656475, 5656713..5656715) /gene="metY" /locus_tag="PA5025" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99738" misc_feature order(5655888..5655896,5655966..5655968,5656095..5656097, 5656182..5656184,5656248..5656250,5656254..5656259, 5656284..5656286) /gene="metY" /locus_tag="PA5025" /note="substrate-cofactor binding pocket [active]" /db_xref="CDD:99738" misc_feature order(5655888..5655896,5655966..5655968,5656182..5656184, 5656191..5656193,5656248..5656250,5656254..5656259) /gene="metY" /locus_tag="PA5025" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99738" misc_feature 5656257..5656259 /gene="metY" /locus_tag="PA5025" /note="catalytic residue [active]" /db_xref="CDD:99738" gene 5657016..5657468 /locus_tag="PA5026" /db_xref="GeneID:881228" CDS 5657016..5657468 /locus_tag="PA5026" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253713.1" /db_xref="GeneID:881228" /translation="MPLPTELARHLTEEKIAFVQRSGLRAEVLEPGYVRLRMPGAGNE NHIGSMYAGALFTLAELPGGALFLTSFDSARFYPIVKEMTLRFRRPAKGDIRVEARLD AERIRQLETEAGERGKAEYSLELQLTDEQGEVVAESAALYQLRSHARP" misc_feature 5657082..5657426 /locus_tag="PA5026" /note="The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated...; Region: hot_dog; cl00509" /db_xref="CDD:469797" misc_feature order(5657163..5657165,5657250..5657252,5657274..5657285) /locus_tag="PA5026" /note="CoenzymeA binding site [chemical binding]; other site" /db_xref="CDD:239527" misc_feature order(5657166..5657168,5657172..5657174,5657181..5657183, 5657253..5657255,5657259..5657270,5657274..5657276) /locus_tag="PA5026" /note="subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:239527" misc_feature order(5657169..5657171,5657193..5657198,5657205..5657210, 5657250..5657252) /locus_tag="PA5026" /note="PHB binding site [active]" /db_xref="CDD:239527" gene 5657581..5658396 /locus_tag="PA5027" /db_xref="GeneID:881229" CDS 5657581..5658396 /locus_tag="PA5027" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253714.1" /db_xref="GeneID:881229" /translation="MIRHLLVAHDLTPEADVALARAAQLARQHDARVSLLHVYDPGLS ASAVKTVSAMLQLKRKEAGLDEDSAIHLFRGQPIDGILQQTRALEPDLLLMGAHHQKT FERFGNTTLDQVVRRSRVPVLLAVREADEPYRQALSALDFSQCACTALRQAYRLLPVE ADLHALHVFESPDDGVLGLPRQNAAHLATQAGLIEQLLSDEQERLPGVGPQLSHEVVP GVLPYSLDAALKQRQPELLALGRHSRNALMQALLGNLAQRYLRQPSCDVLVTS" misc_feature 5657581..5657952 /locus_tag="PA5027" /note="Nucleotide-binding universal stress protein, UspA family [Signal transduction mechanisms]; Region: UspA; COG0589" /db_xref="CDD:440354" misc_feature 5657989..5658387 /locus_tag="PA5027" /note="Universal stress protein family; Region: Usp; pfam00582" /db_xref="CDD:425765" gene complement(5658418..5659185) /locus_tag="PA5028" /db_xref="GeneID:881175" CDS complement(5658418..5659185) /locus_tag="PA5028" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253715.1" /db_xref="GeneID:881175" /translation="MRRVVFNQKGGVGKSSIACNLAAVSAAEGYRTLLVDLDAQANST HYLTGLTGEDLPVGIADFFKQTLSSGPFSKKGRVEIYETPFDNLHIVTSSPELADLQP KLESKHKINKLRKLLDELDEDYDRIYLDTPPALNFYTVSALIAADRCLIPFDCDSFSR QALYGLLQEIEELRDDHNEDLQVEGIVVNQFQPRASLPQQLLDELVAEELPVLPVYLM SSVKMRESHQACTPLIFLEPRHKLTQQFVELHGLLES" misc_feature complement(5658439..5659185) /locus_tag="PA5028" /note="ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ [Cell cycle control, cell division, chromosome partitioning, Cell motility]; Region: ParA; COG1192" /db_xref="CDD:440805" gene complement(5659276..5660181) /locus_tag="PA5029" /db_xref="GeneID:881176" CDS complement(5659276..5660181) /locus_tag="PA5029" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253716.1" /db_xref="GeneID:881176" /translation="MELRHLRYFIAVAEELHFGRAAERLGISQPPLSQQIQALEEEIG ARLFERTNRRVELTDAGRLFLDESRQVLAQVDKAVLLARRAHLGELGELKIGFTSSAP FTSTIPSSIHAFRKAYPDVHLDLQEMSSRQVLKALLEESLQVGVIRPLALPDAVHWVE LFREPLVAVLRADHPLAAGSEDGLAIAALAEEPFVFFPRSYGTGLYDQVIALTRQAGF SPRIAQEASEAMTIIGLVSAGLGVSILPASFRRTRVDGVVYRTLSDPEATTAVWLVRR QNEGSPLALSFIDLVTREAASLRRR" misc_feature complement(<5659651..5660175) /locus_tag="PA5029" /note="LysR transcriptional regulator; Provisional; Region: rbcR; CHL00180" /db_xref="CDD:177082" misc_feature complement(5659309..5659908) /locus_tag="PA5029" /note="The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold; Region: PBP2_LTTR_aromatics_like; cd08414" /db_xref="CDD:176106" misc_feature complement(order(5659414..5659416,5659468..5659473, 5659477..5659482,5659498..5659503,5659558..5659563, 5659669..5659671,5659801..5659803,5659807..5659809, 5659813..5659815,5659837..5659839,5659846..5659851, 5659855..5659860,5659867..5659869,5659891..5659893)) /locus_tag="PA5029" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176106" misc_feature complement(order(5659567..5659569,5659588..5659593, 5659738..5659740,5659888..5659890)) /locus_tag="PA5029" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:176106" gene 5660357..5661673 /locus_tag="PA5030" /db_xref="GeneID:881212" CDS 5660357..5661673 /locus_tag="PA5030" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_253717.1" /db_xref="GeneID:881212" /translation="MSNPQVRPQAEEEPALIEAAREAANEVLEAATEVERYIEKGTPQ FMRTSLALFSGGFATFALLYCIQPMMPVLSKAFSISAAESSLALSVATAMLALGLLVT GPISDAIGRKPVMVVSLLAAALFTLGSAVMPTWHGVLLMRALVGLSLSGLAAVAMTYL SEEIHPQHIGLSMGLYIGGNAIGGMSGRLISGVLVDFISWHAALAVLGGLALVAALVF WRVLPESKHFRPAPLKPATLLNGYRLHFRDAGLPWLFLIGFLLMGSFVTLFNYIGYRL LAEPYHMSQAVVGVLSVVYLSGIYSSAWVGSLADKLGRRKVLWAVILLMLGGLLLTLF EPIPLMLAGLLLFTFGFFGAHSVASSWIGRRALRAKGQASSLYLFSYYVGSSLAGTLG GVFWHYYGWNGIGLFIGSLLVVAVLVSLHLARLPALPGNTLAQPAH" misc_feature 5660504..5661583 /locus_tag="PA5030" /note="Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; Region: MFS_NepI_like; cd17324" /db_xref="CDD:340882" misc_feature order(5660531..5660536,5660543..5660548,5660555..5660557, 5660651..5660653,5660801..5660806,5660810..5660818, 5660825..5660827,5660885..5660887,5660894..5660899, 5660906..5660908,5661128..5661130,5661137..5661142, 5661149..5661157,5661164..5661166,5661248..5661250, 5661260..5661262,5661404..5661409,5661419..5661421, 5661431..5661433,5661476..5661478,5661485..5661490, 5661497..5661502,5661509..5661511) /locus_tag="PA5030" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340882" gene complement(5661701..5662630) /locus_tag="PA5031" /db_xref="GeneID:881213" CDS complement(5661701..5662630) /locus_tag="PA5031" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_253718.1" /db_xref="GeneID:881213" /translation="MHPWTRRNIPQLAGRLALVTGANSGLGWQAARTLAGKGATVVMA CRNREQAERARRAILDEYPQARLELADLDLADLASIRACAAGFRQRHARLDLLFNNAG VMFLPLRRTRDGFEMQMGTNHLGHFALTGLLLDSLLAAPRPRVVGMTSGFNQFGRLPL DDLNAERGYNRYLAYCHSKQANLLFSLELQRRAGQRGVLLQSLAAHPGYAATNLQYAA PAMSGSRLGRWAMKVANGAFAQSAEMGALPALSALTEQRWYGGAYVGPDRWLETRGYP AAARIPRNARDLGLAARLWALSEELTGVRFWSE" misc_feature complement(5661713..5662621) /locus_tag="PA5031" /note="short chain dehydrogenase; Provisional; Region: PRK06197" /db_xref="CDD:235737" gene 5662742..5663815 /locus_tag="PA5032" /db_xref="GeneID:881214" CDS 5662742..5663815 /locus_tag="PA5032" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253719.1" /db_xref="GeneID:881214" /translation="MSRRTDSDAPTITAAYPRLLLGLLEERGLDGRALLREIGLSTLR LEEPEARVTSQQYQAIAATALALSGDPDLGAQLALRTPPTAHGSLGYAMMASATLGDA LCLALRYMPLLQGNVEISLLREDEQVILRMLPGPALPPALHRYFSEALLIGLYRSGAW LLGEPALVGRLDFDYPEPAVPVPLPQCRYDQAHVQLVFPAILLARSLPMADPAALRRA REHCERELALLDAGRRDICARVRLELERQEQRFPNLEEVAARLHLSSRSLKRHLHDAG TSFRQLLGQARQRQALRLLRRPEVSLQRIALYLGYSDPTNFTRAFKRWTGEPPSDTRA RLLGGQPVSRTNAKRSTNPSRFP" misc_feature 5662829..5663362 /locus_tag="PA5032" /note="Arabinose-binding domain of AraC transcription regulator, N-term; Region: Arabinose_bd; pfam12625" /db_xref="CDD:432679" misc_feature 5663495..5663740 /locus_tag="PA5032" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene 5663889..5664869 /locus_tag="PA5033" /db_xref="GeneID:881201" CDS 5663889..5664869 /locus_tag="PA5033" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253720.1" /db_xref="GeneID:881201" /translation="MKPAIKRACLLGTALFSLCASAAQAAGVLVGTWDLRGNGQLAAV YRDGANLQVVEGGSTRNYSFGNVVWSVFGATDTDGQPGAEILVKAGPDLVIVSHASTT QRKYPVGNVSWAIMRATDVDNVAGDEVILSIGNGVRTVFDRTRTQRDATFSYNGTWGL FDVADVDGAPGKELVLNMGNGVKVIDPRTSGAKDFTFSGYHALAQIADLDGQPGAEII GRTSTGIYVISNASSRKEYSIGASAWALYGGTADTDGKPGNELIVVMQGKVRVIHHAS GASSDYRIGDVNYSIDSVADMDGQPGAEILVRDANGKLFVINDRTGKVSS" gene complement(5664990..5666057) /gene="hemE" /locus_tag="PA5034" /db_xref="GeneID:881202" CDS complement(5664990..5666057) /gene="hemE" /locus_tag="PA5034" /EC_number="4.1.1.37" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="uroporphyrinogen decarboxylase" /protein_id="NP_253721.1" /db_xref="GeneID:881202" /translation="MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAG DFMSLCMNPELACEVTLQPLDRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRK VVSSLADIEALPVPDPEQDLGYVMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGG SSKDFRKSKAMLYDNPKAMHALLDKLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAA AYQEFSLAYMRKIVDGLIREHDGRRVPVILFTKGGGLWLESMAEVGAEALGLDWTCDI GSARARVGERVALQGNMDPSVLYANPAAIRAEVARILAAYGKGTGHVFNLGHGITPEV DPAHAGAFFEAVHELSAQYHG" misc_feature complement(5665014..5666030) /gene="hemE" /locus_tag="PA5034" /note="Uroporphyrinogen decarboxylase (URO-D) is a dimeric cytosolic enzyme that decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, without requiring any prosthetic groups or cofactors. This reaction...; Region: URO-D; cd00717" /db_xref="CDD:238368" misc_feature complement(order(5665074..5665076,5665311..5665313, 5665425..5665430,5665434..5665436,5665575..5665577, 5665593..5665595,5665623..5665625,5665767..5665769, 5665782..5665784,5665818..5665838,5665920..5665922, 5665938..5665940,5665950..5665952,5665965..5665982)) /gene="hemE" /locus_tag="PA5034" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238368" misc_feature complement(order(5665074..5665076,5665428..5665430, 5665593..5665595,5665824..5665826,5665965..5665967, 5665977..5665979)) /gene="hemE" /locus_tag="PA5034" /note="active site" /db_xref="CDD:238368" gene complement(5666234..5667667) /gene="gltD" /locus_tag="PA5035" /db_xref="GeneID:881221" CDS complement(5666234..5667667) /gene="gltD" /locus_tag="PA5035" /EC_number="1.4.1.13" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutamate synthase subunit beta" /protein_id="NP_253722.1" /db_xref="GeneID:881221" /translation="MSERLNSDRLNNDFQFIEVGRKDPKKKLLRQRKREFVEIHDLFK PQQAADQAHRCLGCGNPYCEWKCPVHNFIPNWLKLVSEGNILAAAELSHQTNTLPEVC GRVCPQDRLCEGACTLNDGFGAVTIGSVEKYITDTAFAMGWRPDLSKVKPTGRRVAVI GAGPAGLGCADVLVRNGVTPVVFDRNPEIGGLLTFGIPEFKLEKHVLSRRREVFTGMG IEFRLNTEIGKDVTMEQLLDEYDAVFMGMGTYTYMKGGFPGEDLPGVHDALDFLIANV NRNLGFEKSAEDFVDMKGKRVVVLGGGDTAMDCNRTSIRQGAKSVTCAYRRDEENMPG SRKEVKNAKEEGVKFLFNRQPIAIVGEDRVEGVKVVETRLGEPDARGRRSPEPIPGSE EIIPAEAVLIAFGFRPSPAPWFERFEIATDSQGRVVAPAQAQFKHQTSNPKIFAGGDM VRGSDLVVTAIFEGRTAAEGILDYLGV" misc_feature complement(5666237..5667628) /gene="gltD" /locus_tag="PA5035" /note="dihydropyrimidine dehydrogenase subunit A; Provisional; Region: PRK11749; cl46914" /db_xref="CDD:481254" gene complement(5667696..5672141) /gene="gltB" /locus_tag="PA5036" /db_xref="GeneID:881222" CDS complement(5667696..5672141) /gene="gltB" /locus_tag="PA5036" /EC_number="1.4.1.13" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutamate synthase subunit alpha" /protein_id="NP_253723.1" /db_xref="GeneID:881222" /translation="MKAGLYHPETFKDNCGFGLIAHMQGEPSHQLLQTAIEALTCMTH RGGINADGKTGDGCGLLIQKPDLFLRAVAREAFSVDLPEQYAVGMVFFNQDPVKAEAA RENMNREIVAAGLELVGWRKVPIDTSVLGRLALERLPQIEQVFIGGAGLSDQDFAIKL FSARRRSSVANAADSDHYICSFSHKTIIYKGLMMPADLAAFYPDLGDERLQTAICVFH QRFSTNTLPKWPLAQPFRFLAHNGEINTITGNRNWAQARRTKFTNELIPDLEELGPLV NRVGSDSSSMDNMLELMVTGGMDLFRGLRMIIPPAWQNVETMDADLRAFYEYNSLHME PWDGPAGVVLTDGRYAVCLLDRNGLRPSRWVTTKNGYITLASEIGVWDYKPEDVIAKG RVGPGQILAVDTETGQVLHSDDIDNRLKSRHPYKQWLRQNALRIQATLDDDHGVASYD ADQLKQFMKMFQVTFEERDQVLRPLGEQGQEAVGSMGDDTPMAILSRRIRSPYDYFRQ QFAQVTNPPIDPLREAIVMSLETCLGVEQNIFEEAPHHANQAILTTPVISPAKWRTIM TLDRPGFDRHFIDLNYDESMGLEAAVRNIADQAEEAVRGGKVLLILSDRHIAPGKLPV HAALAVGAVHHRLVQTGLRCDSNILVETATARDPHHFAVLIGFGASAVYPFLAYEVLA DLIRTGEVLGDLYEVFKYYRKGISKGLMKILSKMGISTVASYRGAQLFEAVGLSDEVT DLCFTGVASRIQGARFVDIENEQKLLAAEAWSNRKPIQQGGLLKFVYGGEYHAYNPDV VNTLQAAVQQGDYEKFKEYTALVDQRPVSMIRDLLQVKTAAQPLALDEVEPLEAIFKR FDAAGISLGALSPEAHEALAEAMNTLGGRSNSGEGGEDPARYGTLKSSKIKQVATGRF GVTPEYLVNAEVLQIKVAQGAKPGEGGQLPGGKVNGLIARLRYAVPGVTLISPPPHHD IYSIEDLAQLIFDLKQVNPQALVSVKLVSEPGVGTIAAGVAKAYADLITISGYDGGTG ASPITSIKYAGSPWELGLAETHQTLRGNDLRGKVRVQTDGGLKTGLDVIKAAILGAES FGFGTAPMIALGCKYLRICHLNNCATGVATQNDKLRKDHFIGTTAMVINFFTFIATET REWLARLGVRSLGELIGRTDLLEILPGETAKQQNLDLAPLLGSELIPADKPQFCEVEK NPPFDQGLLAEKMVELSKAAIEGLSGGEYELDICNCDRSIGARVSGEIARLHGNQGMA KAPVVFRFKGTAGQSFGVWNAGGLHLYLEGDANDYVGKGMTGGKLVITPPKGSPFKTQ ESAIVGNTCLYGATGGKLFAAGTAGERFAVRNSGSHAVVEGTGDHCCEYMTGGFVCVL GKTGYNFGSGMTGGFAYVLDMDNTFVDRVNHELVEIQRISGEAMEAYRSHLRKVLVEY VNETASEWGANILENLDDYLRRFWLVKPKAASLGSLLTSTRANPQ" misc_feature complement(5667699..5672141) /gene="gltB" /locus_tag="PA5036" /note="glutamate synthase subunit alpha; Provisional; Region: gltB; PRK11750" /db_xref="CDD:236968" protein_bind complement(5672266..5672307) /experiment="Beta-gal reporter assay [PMID: 15175298]" /experiment="DNAse footprinting [PMID: 15175298]" /experiment="EMSA [PMID: 15175298]" /note="'Transcription factor binding site for NP_249584.; Evidence of regulation for: PA5035, PA5036'" /bound_moiety="ArgR" gene complement(5672366..5674021) /locus_tag="PA5037" /db_xref="GeneID:881252" CDS complement(5672366..5674021) /locus_tag="PA5037" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253724.1" /db_xref="GeneID:881252" /translation="MTSLHADEAFLGHYQFSHDPFAPRVPGFKFFPAQRKPVLGQLHH LARYSQLLLLVTGPLGSGKTLLRQALVASTNKDAVLSVVISARTAADETSLLRQVAQG LSINQASLEAILTKVAQLAITGQDVYLMVDDAEQLQDSALEVLLLLASGTNEGRLHVF LFGEPSLLPRLEVFSEGEERFHAIELQPYSEEETRDYLAQRLEGAGQGIELISNDLLV DIHEQSEGWPGAINQVARDALIEAMLANRGAARKATGGSFNLPKKHLVILAVVAIGVI AAWFMQGKSKPEAPQTASTELSMNGATPAQAQQPGSGPAVEFNGSSQPLPLPLVGESQ PVIREPLAQAAGQGGDDEGGLPSAAVPPTVSSSAPPVTPLANNGVTPMHPVPPAPTEP TAPAATPTPTQTPAPAAPVASAPASKPAPAPAPAKPAASKPATTAAAKPAPAPAAKPA SGGGAGSQWYRNQSGGNFALQILGTGSEANAQAFIRQQGGGDFRYFKKTLQGKPFYVV TYGSFPNRAAALAAVKKLPSKVQAGKPWPRTFASIQQEIGQAH" misc_feature complement(5673281..5673994) /locus_tag="PA5037" /note="Type II secretory pathway ATPase component GspA/ExeA/MshM [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: ExeA; COG3267" /db_xref="CDD:442498" misc_feature complement(<5673032..5673238) /locus_tag="PA5037" /note="flagellar basal body-associated protein FliL; Reviewed; Region: fliL; cl00681" /db_xref="CDD:469875" misc_feature complement(5672384..>5672665) /locus_tag="PA5037" /note="hypothetical protein; Reviewed; Region: PRK11901" /db_xref="CDD:237015" gene complement(5674028..5675134) /gene="aroB" /locus_tag="PA5038" /db_xref="GeneID:881253" CDS complement(5674028..5675134) /gene="aroB" /locus_tag="PA5038" /EC_number="4.2.3.4" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="3-dehydroquinate synthase" /protein_id="NP_253725.1" /db_xref="GeneID:881253" /translation="MRTLHVDLGERSYPIYIGENLLGDARWFAPHIVGRRVAVISNET VAPLYLETLLKALQGHEVTPVVLPDGEAYKQWETLQLIFDVLLKERHDRKTTLIALGG GVIGDMAGFAAACYQRGVNFIQVPTTLLSQVDSSVGGKTGINHPLGKNMIGAFYQPQA VVIDTASLKTLPSRELSAGLAEVIKYGFICDEPFITWLEAHMDALLALEPTVVTEAIE RSCAAKARVVGADERESGVRATLNLGHTFGHAIETQQGYGVWLHGEAVGAGTVMALEM SHRLGWLSAAERDRGIRLLRRAGLPVVPPAEMTAEDFMEHMAVDKKVLDGRLRLVLLQ GLGNAVVTGDFPREILDATLRTDYRALADQLGDE" misc_feature complement(5674073..5675134) /gene="aroB" /locus_tag="PA5038" /note="3-dehydroquinate synthetase [Amino acid transport and metabolism]; Region: AroB; COG0337" /db_xref="CDD:440106" gene complement(5675184..5675702) /gene="aroK" /locus_tag="PA5039" /db_xref="GeneID:880961" CDS complement(5675184..5675702) /gene="aroK" /locus_tag="PA5039" /EC_number="2.7.1.71" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="shikimate kinase" /protein_id="NP_253726.1" /db_xref="GeneID:880961" /translation="MVNLILVGPMGAGKSTIGRLLAKELHLAFKDSDKEIEQRCGANI PWIFDVEGEVGFREREQAMLTELCAADGMVIATGGGAVMRDGNRQVLRAGGRVVYLHA SVEHQIARTARDRNRPLLQKPNPGQILRDLMALRDPLYREIADVVVETDERPPRLVVQ EILERLRKLPPR" misc_feature complement(5675187..5675702) /gene="aroK" /locus_tag="PA5039" /note="shikimate kinase; Reviewed; Region: aroK; PRK00131" /db_xref="CDD:234654" misc_feature complement(order(5675238..5675240,5675352..5675354, 5675373..5675375,5675655..5675672)) /gene="aroK" /locus_tag="PA5039" /note="ADP binding site [chemical binding]; other site" /db_xref="CDD:238260" misc_feature complement(order(5675604..5675606,5675610..5675612, 5675658..5675660)) /gene="aroK" /locus_tag="PA5039" /note="magnesium binding site [ion binding]; other site" /db_xref="CDD:238260" misc_feature complement(order(5675295..5675297,5675463..5675471, 5675523..5675525,5675532..5675534,5675604..5675606)) /gene="aroK" /locus_tag="PA5039" /note="putative shikimate binding site [active]" /db_xref="CDD:238260" gene complement(5675714..5677858) /gene="pilQ" /locus_tag="PA5040" /db_xref="GeneID:880962" CDS complement(5675714..5677858) /gene="pilQ" /locus_tag="PA5040" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis outer membrane protein PilQ" /protein_id="NP_253727.1" /db_xref="GeneID:880962" /translation="MNSGLSRLGIALLAAMFAPALLAADLEKLDVAALPGDRVELKLQ FDEPVAAPRGYTIEQPARIALDLPGVQNKLGTKNRELSVGNTRSVTVVEAKDRTRLII NLTALSSYTTRVEGNNLFVVVGNSPAGASVASAAPVKASPAPASYAQPIKPKPYVPAG RAIRNIDFQRGEKGEGNVVIDLSDPTLSPDIQEQGGKIRLDFAKTQLPDALRVRLDVK DFATPVQFVNASAQSDRTSITIEPSGLYDYLVYQTDNRLTVSIKPMTTEDAERRKKDN FAYTGEKLSLNFQDIDVRSVLQLIADFTDLNLVASDTVQGNITLRLQNVPWDQALDLV LKTKGLDKRKLGNVLLVAPADEIAARERQELEAQKQIAELAPLRRELIQVNYAKAADI AKLFQSVTSDGGQEGKEGGRGSITVDDRTNSIIAYQPQERLDELRRIVSQLDIPVRQV MIEARIVEANVGYDKSLGVRWGGAYHKGNWSGYGKDGNIGIKDEDGMNCGPIAGSCTF PTTGTSKSPSPFVDLGAKDATSGIGIGFITDNIILDLQLSAMEKTGNGEIVSQPKVVT SDKETAKILKGSEVPYQEASSSGATSTSFKEAALSLEVTPQITPDNRIIVEVKVTKDA PDYQNMLNGVPPINKNEVNAKILVNDGETIVIGGVFSNEQSKSVEKVPFLGELPYLGR LFRRDTVTDRKNELLVFLTPRIMNNQAIAIGR" misc_feature complement(5677490..5677756) /gene="pilQ" /locus_tag="PA5040" /note="AMIN domain; Region: AMIN; pfam11741" /db_xref="CDD:463338" misc_feature complement(5675729..5677540) /gene="pilQ" /locus_tag="PA5040" /note="Type II secretory pathway, component HofQ [Intracellular trafficking, secretion, and vesicular transport]; Region: HofQ; COG4796" /db_xref="CDD:443824" gene complement(5677912..5678436) /gene="pilP" /locus_tag="PA5041" /db_xref="GeneID:880984" CDS complement(5677912..5678436) /gene="pilP" /locus_tag="PA5041" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein PilP" /protein_id="NP_253728.1" /db_xref="GeneID:880984" /translation="MRARLILSSLLLASLAGCGGGSDFADLQSYMDEVRARPKGTIEP LPKFQPYEAFTYSAASLRSPFQPPVKIDLTVRQKGNKVIKPDETRVKQFLEGFNIETF EMVGTLSNAQGTFALVKGAGGVHRVRVGDYLGRNDGKVVGISEGKIDVIEIVPDGEGN WLERPRSLTLKERS" misc_feature complement(5677918..5678388) /gene="pilP" /locus_tag="PA5041" /note="Type IV pilus assembly protein PilP [Cell motility, Extracellular structures]; Region: PilP; COG3168" /db_xref="CDD:442401" gene complement(5678433..5679056) /gene="pilO" /locus_tag="PA5042" /db_xref="GeneID:880985" CDS complement(5678433..5679056) /gene="pilO" /locus_tag="PA5042" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein PilO" /protein_id="NP_253729.1" /db_xref="GeneID:880985" /translation="MSLASSLESLRKIDINDLDLNNIGSWPAAVKVIVCVLLTAAVLA LGYNFHLSDMQAQLEQQAAEEETLKQQFSTKAFQAANLEAYKAQMKEMEESFGALLRQ LPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATF VSGVSSLPRIVTLHDFEIKPVAPGSTSKLRMSILAKTYRYNDKGLKK" misc_feature complement(5678436..5679023) /gene="pilO" /locus_tag="PA5042" /note="Type IV pilus assembly protein PilO [Cell motility, Extracellular structures]; Region: PilO; COG3167" /db_xref="CDD:442400" gene complement(5679053..5679649) /gene="pilN" /locus_tag="PA5043" /db_xref="GeneID:881025" CDS complement(5679053..5679649) /gene="pilN" /locus_tag="PA5043" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein PilN" /protein_id="NP_253730.1" /db_xref="GeneID:881025" /translation="MARINLLPWREELREQRKQQFLVILGGVLVASAALVFLGDQYFT AAIENQNARNDFLRKEIVVLDARIKEISELKSRRQQLLERMKIIQDLQGNRPIIGRVF DQLVRTLPDGVYFTDLKMTGKNIAIAGAAESNNRVSNLMRNMDASEWLTAPTLNEVKA VTQGAVDQANVFQLTVQQTQPGEEDAKAKHGVAQGAKK" misc_feature complement(5679089..5679649) /gene="pilN" /locus_tag="PA5043" /note="Type IV pilus assembly protein PilN [Cell motility, Extracellular structures]; Region: PilN; COG3166" /db_xref="CDD:442399" gene complement(5679649..5680713) /gene="pilM" /locus_tag="PA5044" /db_xref="GeneID:881162" CDS complement(5679649..5680713) /gene="pilM" /locus_tag="PA5044" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="type 4 fimbrial biogenesis protein PilM" /protein_id="NP_253731.1" /db_xref="GeneID:881162" /translation="MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPL PPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVVAVAGSAVITKTIEMEAGLSEDE LENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYT REQLFGGRQLTEEIQRRYGLSVEEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSL QFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANPFADMALNGKVNAGA LASDAPALMIACGLALRSFD" misc_feature complement(5679655..5680692) /gene="pilM" /locus_tag="PA5044" /note="type IV pilus assembly protein PilM; Region: pilM; TIGR01175" /db_xref="CDD:273484" gene 5680898..5683366 /gene="ponA" /locus_tag="PA5045" /db_xref="GeneID:881163" CDS 5680898..5683366 /gene="ponA" /locus_tag="PA5045" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 1A" /protein_id="NP_253732.1" /db_xref="GeneID:881163" /translation="MRLLKFLWWTCVTLICGVLLSFSGAYLYLSPSLPSVEALRNVQL QIPLKVYSEDGKLISEFGEMRRTPIRFADIPQDFIHALLSAEDDNFANHYGVDVKSLM RAAAQLLKSGHIQTGGSTITMQVAKNYFLTNERSFSRKINEILLALQIERQLTKDEIL ELYVNKIYLGNRAYGIEAAAQVYYGKPIKDLSLAEMAMIAGLPKAPSRYNPLVNPTRS TERRNWILERMLKLGFIDQQRYQAAVEEPINASYHVQTPELNAPYIAEMARAEMVGRY GSEAYTEGYKVITTVRSDLQNAASQSVRDGLIDYDQRHGYRGPETRLPGQTRDAWLKH LGQQRSIGGLEPAIVTQVEKSGIMVMTRDGKEEAVTWDSMKWARPFLSNNSMGPMPRQ PADVAQAGDQIRVQRQEDGTLRFVQIPAAQSALISLDPKDGAIRSLVGGFSFEQSNYN RAIQAKRQPGSSFKPFIYSAALDNGFTAASLVNDAPIVFVDEYLDKVWRPKNDTNTFL GPIPLREALYKSRNMVSIRVLQGLGIERAISYITKFGFQRDELPRNFSLALGTATVTP MEIAGAWSVFANGGYKVNPYVIERIESRDGQVLYQANPPRVPVEEQVAADAEDAGNPG DPEHPESAEGEGSIEAQQVAAKAQTTFEPTPAERIIDARTAYIMTSMLQDVIKRGTGR RALALKRTDLAGKTGTTNDSKDGWFSGYNSDYVTSVWVGFDQPETLGRREYGGTVALP IWIRYMGFALKDKPMHTMAEPPGIVSLRIDPVTGRSAAPGTPGAYFEMFKNEDTPPSV NELPPGSFPGSPLPDDEGAPIDLF" misc_feature 5680898..5683339 /gene="ponA" /locus_tag="PA5045" /note="Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis]; Region: MrcA; COG5009" /db_xref="CDD:444033" gene complement(5683471..5684739) /locus_tag="PA5046" /db_xref="GeneID:881142" CDS complement(5683471..5684739) /locus_tag="PA5046" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="malic enzyme" /protein_id="NP_253733.1" /db_xref="GeneID:881142" /translation="MSDLKTAALEYHAQPRPGKLSVELTKPTATARDLSLAYSPGVAE PVREIARDAELAYQYTGKGNLVAVISDGTAILGLGNLGPLASKPVMEGKGVLFKRFAG IDVFDIEVDAESPQAFIDTVKRISITFGGINLEDIKAPECFEIERALIEQCDIPVFHD DQHGTAIVTAAGMLNALELAGKKLEEAKIVCLGAGAAAISCMKLLVSMGAKVENIYMI DRKGVIHAGRDDLNQYKSVFATETDKRTLADALEGADVFVGLSGANLLEPEDLKRMAP NPIVFACSNPDPEIKPELAHATRNDVIMATGRSDYPNQVNNVLGFPFIFRGALDVRAT RINEEMKIAAALALRDLAKQPVPEDVCAAYGVDKLEFGREYIIPKPMDKRLITVVSDA VAKAAIETGVATLPYPKNYPLKSVDDVFNG" misc_feature complement(<5683522..5684736) /locus_tag="PA5046" /note="bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed; Region: PRK07232" /db_xref="CDD:235976" gene complement(5684842..5686281) /locus_tag="PA5047" /db_xref="GeneID:881143" CDS complement(5684842..5686281) /locus_tag="PA5047" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253734.1" /db_xref="GeneID:881143" /translation="MKTAWLLLLLLGVGALGGCAVNPATGKSDFVMMSEQQELGMGAR YNQEILKQFPRYNDEKLQAYVQRVGERVARSSHRSNLQYHFTVIDSPDINAFALPGGY IYIHRGLIAYLGSEAELAAVLGHEVGHVTARHSVRQQSQASAWNILGQAVAIGTGVGA AGDLANVLGTAFVRGYGRDMELEADGLGAQYLARAGYDPTAMIQVVRVLKNQEDFARE EAARNGQAVQAGGYHGLFDTHPDNDRRLQEVVGPARQLANGQQEVGREVFLRHLEGMP FGDSASAGVRRGQNFYHAELDFTLSYPAGWKILNQPSALLGYPADEQSFIGMKLVPHD SRLTPAEFLRKNAGQRLAQEESLKQAGLNGYTAVVPGNPARRVAVIYQGDRAYLFVGV VKVGSLETQDDRFLSVIRSFRPLRDKERALAQPRRLHLVQVKAGQTLEQLAAGGEGSL SDSVARLRLLNDLYPSGEPRPGDWLKVVR" misc_feature complement(5684845..5686227) /locus_tag="PA5047" /note="Putative Zn-dependent protease [General function prediction only]; Region: COG4784" /db_xref="CDD:443814" gene complement(5686278..5687045) /locus_tag="PA5048" /db_xref="GeneID:881144" CDS complement(5686278..5687045) /locus_tag="PA5048" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="nuclease" /protein_id="NP_253735.1" /db_xref="GeneID:881144" /translation="MGAFFMSVVSAFAGAAEACRPTGALQNVEVARVVDGDTVRLRDG RSVRLIGINAPELAHNGRTTEPFAEAAKQRLQALVSASDGRLALQPGRQARDHYGRTL AHLFDASGANLEARLLGEGLGYLVAVAPNTELTACQQAAERAARSANLGVWKRSPVLS LDRLAQSGFAVVRGRVLEVERNRGGIWLEMDGPLVLRIEPKVLKAFDAKRVMQMAGRS LEVRGWVVDRSRRGAVPAGKARWQMSVTDPAMLEWLP" misc_feature complement(5686545..5687045) /locus_tag="PA5048" /note="Endonuclease YncB, thermonuclease family [Replication, recombination and repair]; Region: YncB; COG1525" /db_xref="CDD:441134" gene complement(5687105..5687320) /gene="rpmE" /locus_tag="PA5049" /db_xref="GeneID:881149" CDS complement(5687105..5687320) /gene="rpmE" /locus_tag="PA5049" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L31" /protein_id="NP_253736.1" /db_xref="GeneID:881149" /translation="MKADIHPTYEAIEATCSCGNVIKTRSTLCKPIHLDVCSECHPFY TGKQKVLDTGGRIDRFKQRFGVFGATK" misc_feature complement(5687108..5687320) /gene="rpmE" /locus_tag="PA5049" /note="50S ribosomal protein L31; Reviewed; Region: rpmE; PRK00019" /db_xref="CDD:234576" gene 5687496..5689715 /gene="priA" /locus_tag="PA5050" /db_xref="GeneID:881150" CDS 5687496..5689715 /gene="priA" /locus_tag="PA5050" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="primosome assembly protein PriA" /protein_id="NP_253737.1" /db_xref="GeneID:881150" /translation="MSDLILRLALPSPLRRLFDYRAPRGIPRSALQPGIRLLLPFGRR ELVGVLIEVTDRSEVPEDKLKPALRVLDAKPPMPAHLLELCRWTAQYYQHSLGDTLSW ALPNLLRQGEPAEARQQRFWHATAQSSLDDPRLARAPRQRQALAILKQHPHGVSHELL NQLEINKDSLDLLKEKGLVELEVRRHSTPPREGGWLAQAELPLNPEQRAAFEAVRASH GGFHCFLLAGVTGSGKTEVYLQLIRETLAAGRQALVLIPEINLGPQTLARFERRFNAR IALLHSALTDRERLDAWLAARDGEADIVIGTRSALFTPLKRPGLIIVDEEHDASYKQQ DGLRYHARDLALVRARLENVPILLGSATPALESLHNAQAGRYGLLRLTQRAGGAHPPK FIRLDVKSMPLDAGLSRPLQQAIGDTLAAGQQVLVFLNRRGFAPTLLCHDCGWISQCP RCDARMTVHQGSGELRCHHCDHRQRPPMNCPQCGKLDLRPLGAGTERAEERLRILFPN HPVLRIDRDSTSRKHAMRDLFATINSGEPCILVGTQMLAKGHHFPRVTLVAILDADGG LFSADFRASERMAQQIVQVAGRAGRAEEPGRVLIQTHLADHPLLVQLTEDGYFAFAEQ ALSERRAAGLPPFAHLALLRAEAHKPGQAEAFLDSACSAAEQLLEQMGGPEVELLGPV PAPMERRAGKHRAQLLLQCMSRAPLHRLLTPWLQSLEQLPGGRQVRWSLDIDPIDLF" misc_feature 5687508..5689706 /gene="priA" /locus_tag="PA5050" /note="Primosomal protein N' (replication factor Y) - superfamily II helicase [Replication, recombination and repair]; Region: PriA; COG1198" /db_xref="CDD:440811" protein_bind 5689077..5689089 /gene="priA" /locus_tag="PA5050" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 5689964..5691727 /gene="argS" /locus_tag="PA5051" /db_xref="GeneID:881194" CDS 5689964..5691727 /gene="argS" /locus_tag="PA5051" /EC_number="6.1.1.19" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="arginine--tRNA ligase" /protein_id="NP_253738.1" /db_xref="GeneID:881194" /translation="MKDTIRQLIQQALDQLTADGTLPAGLTPDIQVENTKDRSHGDFA SNIAMMLAKPAGMKPRDLAARLVEAIPAHEQLAKVEIAGPGFLNFFQDHVWLAASLDR ALADERLGVRKAGPAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVARVLEFLGDTVIR QNHVGDWGTQFGMLLAYLEEQPVDAEAELHDLEVFYRAAKKRFDESPEFADRARELVV KLQAGDPDCLRLWTRFNEISLSHCQKVYDRLGVKLSMADVMGESAYNDDLAQVVADLT AKGLLTEDNGALCVFLEEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRHNVLHAD RVLYFVDQRQALHFQQVFEVARRAGFVPAGMELEHMGFGTMNGADGRPFKTRDGGTVK LIDLLEEAESRAYALVKERNEQRAERGEEPFDEVQLREIGRVVGIDSVKYADLSKHRT SDYSFNFELMLSFEGNTAPYLLYACTRVASVFRKLGQGREQLGGKIVLEQPQELALAA QLAQFGDLINNVALKGVPHLLCAYLYELAGLFSSFYEHCPILTAEDPAQKDSRLRLAA LTGRTLEQGLELLGLKTLERM" misc_feature 5689964..5691676 /gene="argS" /locus_tag="PA5051" /note="Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: ArgS; COG0018" /db_xref="CDD:439789" gene 5691762..5692457 /locus_tag="PA5052" /db_xref="GeneID:881048" CDS 5691762..5692457 /locus_tag="PA5052" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253739.1" /db_xref="GeneID:881048" /translation="MAKKKPAPKRGASRYQAPAAKNGVPGWVWLVAGLAIGGFIMFLM KLEPGRKDVQRERPDAQRPAAVQGKQPQQNGQAQQPAQTQTPAQAKPKYEFYTLLPES EVVVPPEAVPEKAPPPPTPAELAKADEARAKAALAGQVPPPLPKAVVAASTQFFLQAG SFRKQSDADRVRAQIILLGQSVNVEAGNVRDETWYRVMVGPFNSRDQLSQAQKTLSSN GFSNLLLQQRKAR" misc_feature 5691924..5692445 /locus_tag="PA5052" /note="Cell division protein FtsN [Cell cycle control, cell division, chromosome partitioning]; Region: FtsN; COG3087" /db_xref="CDD:442321" gene 5692576..5693109 /gene="hslV" /locus_tag="PA5053" /db_xref="GeneID:881049" CDS 5692576..5693109 /gene="hslV" /locus_tag="PA5053" /EC_number="3.4.25.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP-dependent protease peptidase subunit" /protein_id="NP_253740.1" /db_xref="GeneID:881049" /translation="MTTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVL AGFAGATADAFTLFERFEQQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKD ASLIITGNGDVVEPEHGLIAMGSGGGFAQAAALALLQHNAELSAREVAETALNIAGSI CVFTNQNLTIEELDSAV" misc_feature 5692576..5693094 /gene="hslV" /locus_tag="PA5053" /note="ATP-dependent protease subunit HslV; Region: PRK05456" /db_xref="CDD:235477" misc_feature order(5692579..5692581,5692627..5692629,5692633..5692635, 5692675..5692677,5692948..5692950) /gene="hslV" /locus_tag="PA5053" /note="active site" /db_xref="CDD:238894" misc_feature order(5692648..5692656,5692825..5692827,5692906..5692908, 5692918..5692920,5692957..5692962,5692969..5692971, 5692993..5692995,5693029..5693031,5693041..5693043, 5693050..5693055,5693059..5693061) /gene="hslV" /locus_tag="PA5053" /note="HslU subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:238894" gene 5693138..5694481 /gene="hslU" /locus_tag="PA5054" /db_xref="GeneID:881050" CDS 5693138..5694481 /gene="hslU" /locus_tag="PA5054" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP-dependent protease ATP-binding subunit HslU" /protein_id="NP_253741.1" /db_xref="GeneID:881050" /translation="MSMTPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPAELR AEVTPKNILMIGPTGVGKTEIARRLARLANAPFIKVEATKFTEVGYVGRDVESIIRDL ADAAVKMLREQEIQKVKYRAEDAAEERILDALLPAARPAMGFGDEPAREDSNTRQLFR KRLREGQLDDKEIDIEVADNPAGVEIMAPPGMEEMTNQLQNLFSGMSKGKKKTRKLKV AEALKLIRDEEAVRLVNEEELKARALEAVEQHGIVFIDEIDKIAKRANAGGADVSREG VQRDLLPLIEGCTVNTKLGMVKTDHILFIASGAFHLSKPSDLVPELQGRLPIRVELKA LSPNDFERILTEPHASLTEQYRELLKTEGLAIEFAEDGIKRLAEIAWQVNEKTENIGA RRLHTLLERLLEEVSFSAADLASEHSDKPILIDAGYVNSHLGELAEDEDLSRYIL" misc_feature 5693138..5694478 /gene="hslU" /locus_tag="PA5054" /note="ATP-dependent protease ATPase subunit HslU; Region: hslU; PRK05201" /db_xref="CDD:235364" gene 5694576..5694947 /locus_tag="PA5055" /db_xref="GeneID:881075" CDS 5694576..5694947 /locus_tag="PA5055" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253742.1" /db_xref="GeneID:881075" /translation="MRIPSAIQLHKASKTLTLRYGEDSYDLPAEFLRVHSPSAEVQGH GNPVLQYGKLNVGLVGVEPAGQYALKLSFDDGHDSGLFTWDYLYELATRKDQLWADYL AELASAGKSRDPDESVVKLML" misc_feature 5694576..5694929 /locus_tag="PA5055" /note="Uncharacterized conserved protein, DUF971 family [Function unknown]; Region: COG3536" /db_xref="CDD:442757" gene 5695366..5697045 /gene="phaC1" /locus_tag="PA5056" /db_xref="GeneID:881076" CDS 5695366..5697045 /gene="phaC1" /locus_tag="PA5056" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="poly(3-hydroxyalkanoic acid) synthase" /protein_id="NP_253743.1" /db_xref="GeneID:881076" /translation="MSQKNNNELPKQAAENTLNLNPVIGIRGKDLLTSARMVLLQAVR QPLHSARHVAHFSLELKNVLLGQSELRPGDDDRRFSDPAWSQNPLYKRYMQTYLAWRK ELHSWISHSDLSPQDISRGQFVINLLTEAMSPTNSLSNPAAVKRFFETGGKSLLDGLG HLAKDLVNNGGMPSQVDMDAFEVGKNLATTEGAVVFRNDVLELIQYRPITESVHERPL LVVPPQINKFYVFDLSPDKSLARFCLRNGVQTFIVSWRNPTKSQREWGLTTYIEALKE AIEVVLSITGSKDLNLLGACSGGITTATLVGHYVASGEKKVNAFTQLVSVLDFELNTQ VALFADEKTLEAAKRRSYQSGVLEGKDMAKVFAWMRPNDLIWNYWVNNYLLGNQPPAF DILYWNNDTTRLPAALHGEFVELFKSNPLNRPGALEVSGTPIDLKQVTCDFYCVAGLN DHITPWESCYKSARLLGGKCEFILSNSGHIQSILNPPGNPKARFMTNPELPAEPKAWL EQAGKHADSWWLHWQQWLAERSGKTRKAPASLGNKTYPAGEAAPGTYVHER" misc_feature 5695366..5697042 /gene="phaC1" /locus_tag="PA5056" /note="poly(R)-hydroxyalkanoic acid synthase, class I; Region: PHA_synth_I; cl47022" /db_xref="CDD:481362" gene 5697198..5698055 /gene="phaD" /locus_tag="PA5057" /db_xref="GeneID:881171" CDS 5697198..5698055 /gene="phaD" /locus_tag="PA5057" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="poly(3-hydroxyalkanoic acid) depolymerase" /protein_id="NP_253744.1" /db_xref="GeneID:881171" /translation="MPQPFVFRTIDLDGQTIRTAVRPGKEGSTPLLIFNGIGANLELV FPFVQALDPELEVIAFDVPGVGGSSTPSVPYRFPGLAKLAARMLDYLDYGQVNAIGVS WGGALAQQFAHDYPERCKKLILAATSAGAVMVPGKPKVLMRMASPRRYIQPSYGVHIA PDIYGGAFRRDPKLAMAHASKVRSSGKLGYYWQLFAGLGWTSIHWLHRIRQPTLVLAG DDDPIIPLINMRVLAWRIPNAELHVIDDGHLFLVTRAESVAPIIMKFLAEERRRAVMH PRPFLPKTG" misc_feature 5697207..5698034 /gene="phaD" /locus_tag="PA5057" /note="poly(3-hydroxyalkanoate) depolymerase; Region: PHA_depoly_arom; TIGR02240" /db_xref="CDD:131294" gene 5698359..5700041 /gene="phaC2" /locus_tag="PA5058" /db_xref="GeneID:881185" CDS 5698359..5700041 /gene="phaC2" /locus_tag="PA5058" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="poly(3-hydroxyalkanoic acid) synthase" /protein_id="NP_253745.1" /db_xref="GeneID:881185" /translation="MREKQESGSVPVPAEFMSAQSAIVGLRGKDLLTTVRSLAVHGLR QPLHSARHLVAFGGQLGKVLLGDTLHQPNPQDARFQDPSWRLNPFYRRTLQAYLAWQK QLLAWIDESNLDCDDRARARFLVALLSDAVAPSNSLINPLALKELFNTGGISLLNGVR HLLEDLVHNGGMPSQVNKTAFEIGRNLATTQGAVVFRNEVLELIQYKPLGERQYAKPL LIVPPQINKYYIFDLSPEKSFVQYALKNNLQVFVISWRNPDAQHREWGLSTYVEALDQ AIEVSREITGSRSVNLAGACAGGLTVAALLGHLQVRRQLRKVSSVTYLVSLLDSQMES PAMLFADEQTLESSKRRSYQHGVLDGRDMAKVFAWMRPNDLIWNYWVNNYLLGRQPPA FDILYWNNDNTRLPAAFHGELLDLFKHNPLTRPGALEVSGTAVDLGKVAIDSFHVAGI TDHITPWDAVYRSALLLGGQRRFILSNSGHIQSILNPPGNPKACYFENDKLSSDPRAW YYDAKREEGSWWPVWLGWLQERSGELGNPDFNLGSAAHPPLEAAPGTYVHIR" misc_feature 5698359..5700038 /gene="phaC2" /locus_tag="PA5058" /note="poly(R)-hydroxyalkanoic acid synthase, class II; Region: PHA_synth_II; TIGR01839" /db_xref="CDD:130898" gene 5700097..5700714 /locus_tag="PA5059" /db_xref="GeneID:881186" CDS 5700097..5700714 /locus_tag="PA5059" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253746.1" /db_xref="GeneID:881186" /translation="MKTRDRILECSLLLFNEQGEPNVSTLEIANELGISPGNLYYHFH GKEPLVMALFERFQAELAPLLDPPEEVRLGAEDYWLFLHLIVERLAHYRFLFQDLSNL TGRLPRLARGIRTWLGALKRTLATLLARLKADRQLRSDAPALGQLVEQITLTLLFSLD YQRVLGSKGEVRTVVYQIMMLVAPHLRSEAQRSAESLAQRYLGPE" misc_feature 5700115..5700255 /locus_tag="PA5059" /note="Bacterial regulatory proteins, tetR family; Region: TetR_N; pfam00440" /db_xref="CDD:425684" misc_feature 5700265..5700672 /locus_tag="PA5059" /note="Bacterial transcriptional repressor; Region: TetR; pfam13972" /db_xref="CDD:433616" gene complement(5700758..5701687) /gene="phaF" /locus_tag="PA5060" /db_xref="GeneID:881187" CDS complement(5700758..5701687) /gene="phaF" /locus_tag="PA5060" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="polyhydroxyalkanoate synthesis protein PhaF" /protein_id="NP_253747.1" /db_xref="GeneID:881187" /translation="MAGKKKSEKESSWIGEIEKYSRQIWLAGLGAYSKVSKDGSKLFE TLVKDGEKAEKEAKSDVDAQVGAAKASARSAKSKVDEVRDRALGKWSELEEAFDKRLN SAISRLGVPSRNEVKELHSKVDTLTKQIEKLTGVSVKPAAKAAAKPAAKPAAKPAAKT AAAKPAAKPAAKAAAKPAAKPAAKKTAAKTAAAKPAAKPAAKPTAKAAAKPATKPAAK AAAKPAAKPAAAKPAAKPAAKPAAATAAKPAAKPAAKPAAKKPAAKKPAAKPAAAKPA APAASSSAPAAPAATPAASAPAANAPATPSSQG" misc_feature complement(5701283..5701657) /gene="phaF" /locus_tag="PA5060" /note="Poly(hydroxyalcanoate) granule associated protein (phasin); Region: Phasin; pfam05597" /db_xref="CDD:428533" gene complement(5701698..5702114) /locus_tag="PA5061" /db_xref="GeneID:878049" CDS complement(5701698..5702114) /locus_tag="PA5061" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253748.1" /db_xref="GeneID:878049" /translation="MAKIALKKKTVSESTSLVSEIRHYARQIWLAGLGAYSRLGTEGS DYFKELVKAGEALEKKGKSLVTSQVDSANDSVKTGLSSVKGKVEDQLDRIEQAFDSRV ASTLNRIGIPSRNDVEALSAKLDELSAVLERVARTQ" misc_feature complement(5701707..5702081) /locus_tag="PA5061" /note="Poly(hydroxyalcanoate) granule associated protein (phasin); Region: Phasin; pfam05597" /db_xref="CDD:428533" gene complement(5702258..5702533) /locus_tag="PA5062" /db_xref="GeneID:878050" CDS complement(5702258..5702533) /locus_tag="PA5062" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253749.1" /db_xref="GeneID:878050" /translation="MSRIHIERPHSLGLDAARAKAEKLAERLAKEHGVQCEWQGDELT FKRSGVDGRIAVGADKVAVDVKLGLMLSAMSGLLKGEIEKALDKALA" misc_feature complement(5702282..5702518) /locus_tag="PA5062" /note="Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn); Region: PHA_gran_rgn; pfam09650" /db_xref="CDD:430734" gene 5702669..5703439 /gene="ubiE" /locus_tag="PA5063" /db_xref="GeneID:879743" CDS 5702669..5703439 /gene="ubiE" /locus_tag="PA5063" /EC_number="2.1.1.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ubiquinone/menaquinone biosynthesis methyltransferase" /protein_id="NP_253750.1" /db_xref="GeneID:879743" /translation="MNDPRKGADAEPTTHFGYQNVPESQKAKKVAEVFHSVAAKYDLM NDLMSGGIHRLWKRFTIELSGVRSGNRVLDIAGGTGDLTRQFSRLVGPTGEVVLADIN ASMLKVGRDKLLDKGVSGNVSFVQADAEKLPFPDNHFDCVTIAFGLRNVTHKDEAIRS MLRVLKPGGRLLVLEFSKPSSNLLSKAYDAYSFSLLPLMGKLVTNDSESYRYLAESIR MHPDQETLKAMMVEAGFDRVTYHNMTGGIVALHRGIKP" misc_feature 5702720..5703436 /gene="ubiE" /locus_tag="PA5063" /note="bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE; Region: ubiE; PRK00216" /db_xref="CDD:234689" misc_feature order(5702891..5702911,5702966..5702971,5703047..5703055, 5703098..5703100) /gene="ubiE" /locus_tag="PA5063" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene 5703454..5704080 /locus_tag="PA5064" /db_xref="GeneID:879744" CDS 5703454..5704080 /locus_tag="PA5064" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253751.1" /db_xref="GeneID:879744" /translation="MSSLLIQAVLAAAETGINRVLRLDGTALPRLRRLSAKVIEVDCL SPPLRVFILPAGDGLHFAAQHEAEVDCTLRAPAGNLLHLALARDKTRILHSPEVSMDG DSAALLELAGILQSLELDWEYELSRWLGPLATQVLGSSLRDASRWSAQSLHSLRLNLA DYLAEESRTLVGQHEAEARFAELDQLKLALDRLDARVGRLSQKTKPDA" misc_feature 5703463..5704074 /locus_tag="PA5064" /note="Ubiquinone biosynthesis protein UbiJ, contains SCP2 domain [Coenzyme transport and metabolism]; Region: UbiJ; COG3165" /db_xref="CDD:442398" gene 5704077..5705678 /gene="ubiB" /locus_tag="PA5065" /db_xref="GeneID:878018" CDS 5704077..5705678 /gene="ubiB" /locus_tag="PA5065" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ubiquinone biosynthetic protein UbiB" /protein_id="NP_253752.1" /db_xref="GeneID:878018" /translation="MKLLAVRRLLRIQRVVIRYRLDDLILELPMLPWWLRLLGATLPW RWLPRRKLELTRGARLRLALQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPP FPPELAVKRIEEQLGAKIEQVFARFEREPLASASVAQVHAARLKSGEEVVVKVIRPNL EPVIRSDIAWLFILARLAERVSSEARRLHPVEVVSDYEKTIVDELDLLREAANASQLR RNFEGSPLLYVPQVYWDWCRPKVLVMERIYGIPVTDLETLRDQRTDFKALAERGVEIF FTQVFRDSFFHADMHPGNIFVSTRAPWSPQYIAVDCGIVGSLTDEDQDYLARNLIAFF KRDYRKVAQLHIDSGWVPAETKVNDFEAAIRTVCEPIFEKPLKDISFGQVLLRLFQTA RRFNMEIQPQLVLLQKTLLNIEGLGRQLYPELDLWATAQPFLERWMRERVSPKQLLRN FQQQVEQVPHLSQMARDTLERLSQPHAHNAPPPEWKGSRHDWLGRLVGAVLLVGAAEV GLGQQLEAWPAWVMLAGGVFLILRR" misc_feature 5704089..5705672 /gene="ubiB" /locus_tag="PA5065" /note="The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases; Region: Protein Kinases, catalytic domain; cl21453" /db_xref="CDD:473864" misc_feature order(5704509..5704523,5704527..5704529,5704557..5704559, 5704563..5704565,5704749..5704751,5704806..5704817, 5704941..5704943,5704953..5704958,5704962..5704964, 5705004..5705009) /gene="ubiB" /locus_tag="PA5065" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:270874" gene 5705794..5706198 /gene="hisI" /locus_tag="PA5066" /db_xref="GeneID:878019" CDS 5705794..5706198 /gene="hisI" /locus_tag="PA5066" /EC_number="3.5.4.19" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphoribosyl-AMP cyclohydrolase" /protein_id="NP_253753.1" /db_xref="GeneID:878019" /translation="MKDWLDEIHWNADGLVPAIAQDHETGRVLMMAWMNREALALTAS ENRAIYWSRSRGKLWRKGEESGHVQKLHELRLDCDADVVILMVEQVGGIACHTGRESC FYRVFENGAWKTVDPVLKDPDAIYEHAGHHHE" misc_feature 5705797..5706174 /gene="hisI" /locus_tag="PA5066" /note="phosphoribosyl-AMP cyclohydrolase; Reviewed; Region: hisI; PRK00051" /db_xref="CDD:234598" gene 5706191..5706526 /gene="hisE" /locus_tag="PA5067" /db_xref="GeneID:878486" CDS 5706191..5706526 /gene="hisE" /locus_tag="PA5067" /EC_number="3.6.1.31" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphoribosyl-ATP pyrophosphatase" /protein_id="NP_253754.1" /db_xref="GeneID:878486" /translation="MSDTLTRLAAVLEERKNAAPDSSYVASLYHKGLNKILEKVGEES VETIIAAKDAAASGDCQDLIYETADLWFHSLVMLSALGQHPQAVLDELERRFGLSGHA EKAARQPSA" misc_feature 5706191..5706514 /gene="hisE" /locus_tag="PA5067" /note="phosphoribosyl-ATP diphosphatase; Region: hisE; PRK00400" /db_xref="CDD:179005" gene 5706552..5706800 /gene="tatA" /locus_tag="PA5068" /db_xref="GeneID:878487" CDS 5706552..5706800 /gene="tatA" /locus_tag="PA5068" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="twin-arginine translocation protein TatA" /protein_id="NP_253755.1" /db_xref="GeneID:878487" /translation="MGIFDWKHWIVILIVVVLVFGTKRLKNLGSDVGEAIKGFRKAVN TEEDDKKDQPAAQPAQPLNQPHTIDAQAQKVEEPARKD" misc_feature 5706552..5706797 /gene="tatA" /locus_tag="PA5068" /note="twin-arginine translocase TatA/TatE family subunit; Region: tatA; PRK00442" /db_xref="CDD:234764" gene 5706814..5707239 /gene="tatB" /locus_tag="PA5069" /db_xref="GeneID:879670" CDS 5706814..5707239 /gene="tatB" /locus_tag="PA5069" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="sec-independent translocase" /protein_id="NP_253756.1" /db_xref="GeneID:879670" /translation="MFGISFSELLLVGLVALLVLGPERLPGAARTAGLWIGRLKRSFN TIKQEVEREIGADEIRRQLHNEHILSMEREAQKLLAPLTGQNPPQETPPPAAESPAPS VPTPPPTSTPAVPPADAAAPPAVAASTPPSPPSETPRNP" misc_feature 5706817..5707029 /gene="tatB" /locus_tag="PA5069" /note="mttA/Hcf106 family; Region: TatA_B_E; cl00788" /db_xref="CDD:445098" gene 5707236..5708039 /gene="tatC" /locus_tag="PA5070" /db_xref="GeneID:879671" CDS 5707236..5708039 /gene="tatC" /locus_tag="PA5070" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transporter TatC" /protein_id="NP_253757.1" /db_xref="GeneID:879671" /translation="MSADKPEQPEHDQEMPLVSHLTELRTRLLRSVAAIFLIFAGLFY FSQKIYTLVSEPLRRFLPEGTSMIATDVASPFLAPFKLTMVVALFLAMPVILAQVWGF IAPGLYKHEKRVALPLLVSSIILFYAGMAFAYFLVFPMIFHFFASVTPEGVAMMTDIN SYLDFVLTLFFAFGVAFEIPVATVLLIWIGVVDVDYLKKIRPYVIIGCFVVGMVLTPP DIFSQTMLAVPMWLLFEIGLLFGRLVRKRGEHPDDQPASDGDQPPATRQ" misc_feature 5707260..5707997 /gene="tatC" /locus_tag="PA5070" /note="Twin-arginine protein secretion pathway component TatC [Intracellular trafficking, secretion, and vesicular transport]; Region: TatC; COG0805" /db_xref="CDD:440568" gene 5708036..5708743 /locus_tag="PA5071" /db_xref="GeneID:881231" CDS 5708036..5708743 /locus_tag="PA5071" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="16S ribosomal RNA methyltransferase RsmE" /protein_id="NP_253758.1" /db_xref="GeneID:881231" /translation="MNLLLLDDADFVSADRAVLHDRRLKHLHEVHRAENGDTLRVGRL GGWMGEGRLLKLDASEATLEVRFDQPPPAKLPITLLLALPRPKMLRRVLQTIAAMGVP KLVLLNSYRVEKSFWQTPFLDPAAIRENLVLGLEQARDTVLPEIIVEKRFKPFVEDRL PALAAGSLGLVGHPGPWPACPRAVEKPVTLAIGPEGGWIPYEVDKLREAGLHPVQLGE RILRVETAVSALLARLF" misc_feature 5708036..5708740 /locus_tag="PA5071" /note="16S ribosomal RNA methyltransferase RsmE; Provisional; Region: PRK11713" /db_xref="CDD:236959" gene 5708955..5710898 /locus_tag="PA5072" /db_xref="GeneID:881232" CDS 5708955..5710898 /locus_tag="PA5072" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="chemotaxis transducer" /protein_id="NP_253759.1" /db_xref="GeneID:881232" /translation="MYDWWVLQLAKLSVSRKLMVGFGVLLALLLLVVISSNRTLTHQT ALSEQLAEVASLMEQTQQAEQGRLAFEAGSDPRQAEQVRQTLAGMLQRLQALRDSELD PAALAHQVEAIEAYRKAFDDLAAADQQRSAARGVLVGTAQQALDSFARLEELMDASLA QQAGDPQALQRSRAVADLHQQLLMVRYQVRGYVFERSDKAEQAAFAAFDALRQAATTL RGQLPGEADAALEQAMGSLQGYRGGIEQFRAGVIRTRQAQQAMQSSTQDMARAGRTLT EAGRQLRESTASRDRASLWLIAALALAFGCVAGWAINRQIVRPLDEALAQAEAIAAGD LGKRPQNPLTLQRRDELGQLQRVMQRMGDSLRELVGRISDGVSQLASSAEELSAVTEQ TRAGVNSQKVETDQVATAMHEMAATVQDVARNAELASQAARQADEEARQGDAVVDQAV TRIERLASEMDVSSEAMARLKNESEQIGSVLDVIKSVAEQTNLLALNAAIEAARAGDA GRGFAVVADEVRGLAQRTQQSTAEIEGLIQRLQQGAGEAAERLENSRSLTASTVELAR RAGAALDSITRTVSDIQNMNLQIATAAEQQSTVAEEINRSVLSVRDVAEQSAAASEQT AASSGELARLGTQLQAQVGRFRL" misc_feature 5709291..5710895 /locus_tag="PA5072" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" gene 5711008..5711469 /locus_tag="PA5073" /db_xref="GeneID:881152" CDS 5711008..5711469 /locus_tag="PA5073" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253760.1" /db_xref="GeneID:881152" /translation="MRPMTIDIDELAFALDTPGIDHYLDLYSGKVLLISAEAPDPELD ALLENEPERLLLIDPLSTTQSLGLMQDFLREVEEPHAYATLANALQSRKPFKAFKHSL MEYPELLQDWYRYQNERLREWALDWLEDNDIQPAARQSPTSLLPPPGKPFA" misc_feature 5711008..5711463 /locus_tag="PA5073" /note="Uncharacterized protein family (UPF0158); Region: UPF0158; pfam03682" /db_xref="CDD:308978" gene complement(5711477..5712211) /locus_tag="PA5074" /db_xref="GeneID:881153" CDS complement(5711477..5712211) /locus_tag="PA5074" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_253761.1" /db_xref="GeneID:881153" /translation="MIEVRNLLKVFDTRGQVVRAVDDVSTRVARGEVLVVIGPSGSGK STFLRCLNGLEEFDEGSVSIDGVDLADPRTDINAYRREVGMVFQHFNLFPHMTVLENL CLAQRVVRKRGKAEREAKARALLAKVGIGQKADEYPSRLSGGQQQRVAIARALCMDPK VMLFDEPTSALDPEMVGEVLDVMKTLAVEGMTMVCVTHEMGFAREVADRVLFFDHGKL LEDAPPAQFFDNPQDPRAQAFLRQVL" misc_feature complement(5711483..5712211) /locus_tag="PA5074" /note="ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; Region: GlnQ; COG1126" /db_xref="CDD:440743" gene complement(5712204..5713166) /locus_tag="PA5075" /db_xref="GeneID:879764" CDS complement(5712204..5713166) /locus_tag="PA5075" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_253762.1" /db_xref="GeneID:879764" /translation="MTKKKRSVWPWHLLTGLILLVLAWALWFSTSLISYEWRWNRVPQ YFAYQAEEPLRANEIGRVEAIEEQGRDARVTLLGESGEKQVVTVAQDSLQFSEGDDVA EGDAVGVTRHWAAGPLLWGLWTTLWLSLVSGAIGLAIGLVAGLCRLSKNPTLHDLSTI YVELVRGTPLLVQIFIFYFFIGTVLNLSREFAGVAALALFTGAYVAEIIRAGVQSIAR GQNEAARSLGLNAGQSMRYVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKS GREAITTSFSTFEIWFCVAALYLLLNLPLSHMASRLERRLGQSD" misc_feature complement(5712207..5712830) /locus_tag="PA5075" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" gene complement(5713232..5714032) /locus_tag="PA5076" /db_xref="GeneID:879765" CDS complement(5713232..5714032) /locus_tag="PA5076" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_253763.1" /db_xref="GeneID:879765" /translation="MKKYLASLVLGVCALVGVASVQAAGAVEDAVKRGTLRVGMDPTY MPFEMTNKRGQIIGFEVDLLKAMAKSMGVKLELVSTSYDGIIPALLTDKFDMIGSGMT LTQERNLRLNFSEPFIVVGQTLLVRKELEGKIKSYKDLNDPQYSITSKIGTTGEIVAR KLISKAKYHGFDNEPEAVMDVVNGKADAFIYDSPYNVVAVSKFGAGKLVYLDQPFTYE PLAFGLKKGDYDSINFINNFLHQIREDGTYQRIHDKWFKNTEWLKEME" misc_feature complement(5713265..5713930) /locus_tag="PA5076" /note="Amino acid-binding domain of the type 2 periplasmic binding fold superfamily; Region: PBP2_Dsm1740; cd13629" /db_xref="CDD:270347" misc_feature complement(order(5713457..5713462,5713511..5713513, 5713571..5713576,5713583..5713585,5713712..5713714, 5713727..5713735,5713787..5713789,5713901..5713903, 5713910..5713912)) /locus_tag="PA5076" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:270347" misc_feature complement(order(5713277..5713279,5713286..5713288, 5713310..5713312,5713319..5713324,5713331..5713336, 5713343..5713345,5713355..5713357,5713376..5713378, 5713382..5713384,5713691..5713699,5713706..5713711)) /locus_tag="PA5076" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:270347" protein_bind 5713365..5713377 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 5713409..5713421 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(5714270..5716855) /gene="mdoH" /locus_tag="PA5077" /db_xref="GeneID:879628" CDS complement(5714270..5716855) /gene="mdoH" /locus_tag="PA5077" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glucosyltransferase MdoH" /protein_id="NP_253764.1" /db_xref="GeneID:879628" /translation="MNNPSTTKAPLADYLAHLPLAEEERERLGESASFSELHARLAGA EGAAADAGGDPALASVRARLQLGTPELDDAEMFGVDAQGRTFLKISPPIRRTKVIPEP WRTNILVRGWRRLTGRSNPPKPKRALPRARWQRVGSLRRFILLLLMLAQTSVATYYMK GILPYQGWAFVDLEELAQQSLLDTVQQVLPYVIQFGILALFAILFCWVSAGFWTALMG FWELLTGRDRYRISGSSAGSEPIAADARTAIVMPICNEDVPRVFAGLRATVESMAATG EMERFDFFVLSDTNDPDIAVAEQQAWLELCRETKGFGKIFYRRRRRRVKRKSGNIDDF CRRWGGDYRYMVVMDADSVMSGDCLAKLVRLMEANPEAGIIQTAPKASGMDTLYARMQ QFATRVYGPLFTAGLHFWQLGESHYWGHNAIIRMQPFIDHCALAPLPGKGSFAGAILS HDFVEAALMRRAGWGVWIAYDLDGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKG MHPVHRAVFLTGVMSYLSAPLWFFFLVLSTALLAVHQLMEPQYFLEPRQLFPIWPQWH PEKAIALFSTTLTLLFLPKLLSVMLIWAKGAKGFGGVIRVTLSMLLEMFFSVLLAPVR MLFHTRFVLAAFLGWSVQWNSPQRDDDATPWSEAIRRHGMQTLLGIAWTLLVAWLNPR FLWWLSPIVGSLILSIPVSVISSRVKLGLRARDEKLFLIPEEYDTPRELRATDEYTYE NRWHALKDGFLKAAVDPLLNALACAMGTARHNRAQAIETVRGERIGKAIDKGPEQLDG ATRLALLSDPVALSRLHTRVWEEDRDDWLGRWRKAEADDPHAASVPLAQVVPGDAGLL PAAQS" misc_feature complement(5714396..5716471) /gene="mdoH" /locus_tag="PA5077" /note="Membrane glycosyltransferase [Cell wall/membrane/envelope biogenesis, Carbohydrate transport and metabolism]; Region: MdoH; COG2943" /db_xref="CDD:442186" gene complement(5716848..5718425) /locus_tag="PA5078" /db_xref="GeneID:879629" CDS complement(5716848..5718425) /locus_tag="PA5078" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="glucan biosynthesis protein G" /protein_id="NP_253765.1" /db_xref="GeneID:879629" /translation="MIFRSVSNTDFRARVRTLLLAGSTALAFVAAPVWAFSIDDVASK AKDLAGDKYSAPTSNLPSEFSEMKFADYQQIRFINERAYWGKLKTPFKLSFYHQGMHF DTPVKINEVTATTVKPIKYDRTKFDFGSLKFDENATKDLGYAGFRVLYPINKADKQDE IATFLGASYFRVVGKGQVYGLSARGLAIDTALPSGEEFPRFREFWIERPKAQDKQLVI YALLDSPRATGAYRFVLRPGKDAVMDVQARVFLRDKVSKLGLAPLTSMYLFGSNQPSE QHNFRPELHDSSGLQIHAGNGEWLWRPLNNPKHLSVSTFSVENPKGFGLLQRGREFSR YEDLDDRYDLRPSAWIEPKGDWGKGTVELVEIPTPDETNDNIVAFWNPETQPEVGKPL DFAYRLHWTMDEDELHDPKSSWVKQTMRSVGDVKQKNLIRQQDGSTALVVDFEGPALK DLAPDAPVTTQVSTDSNAEVVENSLRYNPVLKGWRLTLRIKVKDPKKPVEMRAALVDE AQKPLSETWSYQLPADE" misc_feature complement(5716854..5718392) /locus_tag="PA5078" /note="glucan biosynthesis protein G; Provisional; Region: mdoG; PRK13274" /db_xref="CDD:237328" gene complement(5718882..5719319) /locus_tag="PA5079" /db_xref="GeneID:880247" CDS complement(5718882..5719319) /locus_tag="PA5079" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="D-tyrosyl-tRNA(Tyr) deacylase" /protein_id="NP_253766.1" /db_xref="GeneID:880247" /translation="MKALLQRVGAARVEVGGEIVGSIDRGLLVLVGVEPEDGERCAAK MLHKLLNYRVFGDDEGKMNRSLLDVQGGLLLVSQFTLAANTRSGLRPSFSSAAPPAQG EAVFEHLVKLAREAYPQVATGRFGADMQVHLVNDGPVTFLLES" misc_feature complement(5718885..5719319) /locus_tag="PA5079" /note="D-aminoacyl-tRNA deacylase [Translation, ribosomal structure and biogenesis]; Region: Dtd; COG1490" /db_xref="CDD:441099" gene complement(5719316..5720287) /locus_tag="PA5080" /db_xref="GeneID:880248" CDS complement(5719316..5720287) /locus_tag="PA5080" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="prolyl aminopeptidase" /protein_id="NP_253767.1" /db_xref="GeneID:880248" /translation="MLVLYPEIKPYARHELAVDEPHVLYADESGSPDGLPVVFVHGGP GSGCDALSRRFFDPNLYRIVTFDQRGCGRSTPHASLEKNSTWELVADMERLREHLGIE KWVLFGGSWGSTLSLAYAQTHPERVHALILRGIFLCRPQDIHWFYQEGASRLFPDYWE DYVAPIPPEERGDLLAAFHKRLTGSDQIAQMHAAKAWSTWEGRTATLRPNPMVVDRFT EPGRALSISRIENHFFVNQGFLRPNQLLEDMHRIAHLPGVIVHGRYDAICPLDNAWAL HQAWPNSELQIIRDAGHTASEPGIVDALVRATNEIGRRLLDLPPEAE" misc_feature complement(5719355..5720266) /locus_tag="PA5080" /note="A functionally diverse superfamily containing proteases, lipases, peroxidases, esterases, epoxide hydrolases and dehalogenases. The catalytic apparatus typically involves three residues (catalytic triad): a serine, a glutamate or aspartate and a...; Region: alpha/beta hydrolases; cl21494" /db_xref="CDD:473884" gene 5720469..5720945 /locus_tag="PA5081" /db_xref="GeneID:880086" CDS 5720469..5720945 /locus_tag="PA5081" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253768.1" /db_xref="GeneID:880086" /translation="MAEALRHRIRAAGLLVVEQRILLVRHEVGGDIYWIPPGGGFESE CDESTKDTVRREFFEETGLRVDVGPLVYVREFAEPAAGRFHMELFYRIDAWRGEPTLA NLKGLGGDEFDIREVGWIARDELPGLPSFYPAELADDVWSRLDAPTPSIRHLGLQR" misc_feature 5720490..5720891 /locus_tag="PA5081" /note="ADP-ribose pyrophosphatase and similar proteins; Region: NUDIX_ADPRase; cd18880" /db_xref="CDD:467591" gene complement(5720950..5721849) /locus_tag="PA5082" /db_xref="GeneID:880087" CDS complement(5720950..5721849) /locus_tag="PA5082" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_253769.1" /db_xref="GeneID:880087" /translation="MKTLVSSTFALSLSLAIGAAQAEELSGTLKKVADNGTITLGYRD ASVPFSYLGDNSGQPMGYSVELAGKVVERLKSTLGKPELKVKYNLVTSQTRIPLVQNG TVDLECGSTGVTAERQKQVAFSYGFIYVKGQLLTRKDSGIAHFDDLKGKNVVTTAGTT NERYLKNYNAEHKLGMNVVSAKDHGEAFQMLQSGRAVAFYMDDALLYGERAKARQPHD WVVVGEPQSREIYSCMVRKDDPQFLALVNETLAGLYRSGEIQGIYQRWFQQPIPPKGL NLEFPMTAELKAILENPTSDPVQ" misc_feature complement(5720971..5721819) /locus_tag="PA5082" /note="glutamate and aspartate transporter subunit; Provisional; Region: PRK10797" /db_xref="CDD:236763" gene complement(5721892..5722242) /locus_tag="PA5083" /db_xref="GeneID:880265" CDS complement(5721892..5722242) /locus_tag="PA5083" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253770.1" /db_xref="GeneID:880265" /translation="MEPTRIATNDRLSAAVCFDALVFLSGQVPGQAEDIHGQTREVLA KIDALLAEAGSRKERILSATIYLKDIARDFAALNEVWTQWLPTGQAPSRTTVQAELAR PSVLVEITVVAARG" misc_feature complement(5721901..5722212) /locus_tag="PA5083" /note="This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence...; Region: YjgF_YER057c_UK114_like_2; cd06150" /db_xref="CDD:100007" misc_feature complement(order(5721907..5721909,5721913..5721915, 5721919..5721921,5721949..5721975,5721988..5721990, 5722000..5722002,5722009..5722011,5722045..5722047, 5722051..5722053,5722057..5722062,5722066..5722068, 5722165..5722170,5722174..5722176,5722180..5722182, 5722189..5722191,5722195..5722197,5722204..5722209)) /locus_tag="PA5083" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100007" misc_feature complement(order(5721919..5721921,5721964..5721966, 5722009..5722011,5722021..5722023,5722207..5722209)) /locus_tag="PA5083" /note="putative active site [active]" /db_xref="CDD:100007" gene complement(5722267..5723517) /locus_tag="PA5084" /db_xref="GeneID:880266" CDS complement(5722267..5723517) /locus_tag="PA5084" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_253771.1" /db_xref="GeneID:880266" /translation="MAQRVCIIGAGVVGLATAYALVREGFDVTLVEARERGGLETSYA NGGQLSYRYVAPLADSGVPAQALGWLLRNDAPLRLRPRLDPAQWRWLLGFLAACRGSL NRRNAAHLLRLALLSQRTLQDWREEDGLDGFDWRRNGKLVAFRQPASFARARQGLADP SAQFVLTAAECLALEPALSAAPFVGGIHTPDEEVADCHAFCVQLAERLQASGHCRQLH GRRVTKIVEGGAAVRGVEVGGDLIEADHVVLAAGYRSAELMLPGLRLPLYPLKGYSLT LPVGAQHRAPDTSITDYDRKIVYARIGERLRIAAMVDIVGFDPGLEPARLALLRQQAR DTFPQGGDFDAAVEWAGMRPATPTGVPLVGNGGYRNLWLNLGHGALGFTLACGSGRLL AEQIGRRPPSIDTTGLLPRGALAG" misc_feature complement(5722294..5723508) /locus_tag="PA5084" /note="D-amino acid dehydrogenase; Region: PRK00711" /db_xref="CDD:234819" gene 5723582..5724538 /locus_tag="PA5085" /db_xref="GeneID:880267" CDS 5723582..5724538 /locus_tag="PA5085" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253772.1" /db_xref="GeneID:880267" /translation="MNKDGQGINPGYGLAPMKLRHIEVFQAIRQAGSVSGAAQLLHVS QPAVSKVLQHAEQQLGFPLFLRVRGKLLATPEALELEREVAKLSDSLQAVRRLAQNLR RQPGHSLRIGATPALALSLLPRAIGEWSARYPQSGCELATLHSRELVQGLLMRELDLA LSLKQPEHPGLRGEAIASGVLVALAPREHWPEAERRQPLSLAGLAGEALIGLSTADPL FARLEDYLSAVEPPPQVKIAVQTYALARALVEAGAGLALVDPFTALGADPHSTAIRPL SPAFPVTLYAITRADETPPHTLAPLLRMLARQAEERLRAVQM" misc_feature 5723630..5724514 /locus_tag="PA5085" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene complement(5725479..5726348) /locus_tag="PA5087" /db_xref="GeneID:882273" CDS complement(5725479..5726348) /locus_tag="PA5087" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253774.1" /db_xref="GeneID:882273" /translation="MAIGLWAVLCLAGVPVMANSKPFVCANEKDHLPPLDPQADAWYR EAAALAKPDTLRPWGRIVEIYSKAVERGHWKAMHNLANLYRTGWPGGVEKDPQKALDL YQKMIDLDVPQGFYDMGAMIGNRAGVKNPATDGLTFLDKAASLGNPPALTELGKLYIY VAKEKELGLAYASCASSQGYAPASYELGSYYELVENNYPKALSYYQVSVSQGGRSAAF FLSRVFGKRTPPSSAMWYTPDEKLEKFYYSLYLQIDADPDLRFPNLVKYNPLPPHPVQ GYDAARPDWKPGQ" misc_feature complement(5725677..5726297) /locus_tag="PA5087" /note="TPR repeat [General function prediction only]; Region: TPR; COG0790" /db_xref="CDD:440553" misc_feature complement(5726091..5726177) /locus_tag="PA5087" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" misc_feature complement(5725977..5726066) /locus_tag="PA5087" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" misc_feature complement(5725869..5725961) /locus_tag="PA5087" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" gene complement(5726357..5727238) /locus_tag="PA5088" /db_xref="GeneID:882244" CDS complement(5726357..5727238) /locus_tag="PA5088" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253775.1" /db_xref="GeneID:882244" /translation="MMRPLCFFLLIFLLSGNPVMAAELRPFICVNEKDHLPSLDPQAD AWYREAVALAKPDTLRPWDRIVDLYSKAVERGHWKAMHNLASLYRTGWPGGVEKDTQK ALDLYQKMIDLKVPQGFYDMAAMIGNRAGVKNPATDGLTFLDKAASLGNPPALTELGR LYIYVAGQDELGLKYTNCAAGQGYAPANYELAMYYRLVAHNYPKAAGYYLLAASQGND DAAFFMSGVFDKTSPDVDRMWYAPDEKLHKLYDGIYDQLAADPDLRFPNLIKDHPLPP HPTQGYDADRPDWKPGQ" misc_feature complement(5726567..5727178) /locus_tag="PA5088" /note="TPR repeat [General function prediction only]; Region: TPR; COG0790" /db_xref="CDD:440553" misc_feature complement(5726969..5727055) /locus_tag="PA5088" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" misc_feature complement(5726855..5726944) /locus_tag="PA5088" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" misc_feature complement(5726747..5726839) /locus_tag="PA5088" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" misc_feature complement(5726564..5726638) /locus_tag="PA5088" /note="SLR repeat [structural motif]; Region: SLR repeat" /db_xref="CDD:276807" gene complement(5727239..5729476) /locus_tag="PA5089" /db_xref="GeneID:882245" CDS complement(5727239..5729476) /locus_tag="PA5089" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253776.1" /db_xref="GeneID:882245" /translation="MSDLYKPQTLKLYAQQAGSVRLTLDWFANKAFYPPRAGVHIKPL INGQAAFDAVHAAMEAARHSIDIITWGFDPAMRFKRPDGPRIGELLQTKGREGVQARV LVWSNQLARLKENTIPGAGVGGSGGTWVGSGVASGSAVDNEVLRLEQRRQHNLNLIAR QQEALERSERLHREGRLPSFDPRGAAHARTRIAELEAENAEIQRTLDSSGAQGYGGKR GSGGTRQDPWGQIFTRDWFKAVRGGGLQNVEFRTRDFEQTARPVMNGEQVRLVNGRLQ SLIHLLRADGIDDLGIGQLLVLTQFASHHQKMVLVDYGSPQAIGFVMGHNMHRNYWDT SAHLFDDRAAGRDPGFGPWQDISMQVQGPVLADLSRNFSEAWDLETPWYKRWFSTPSL TAERDALPLPKIATPASNSVAQICRTQPQDDERSILEHYLKALGNATDYVYMENQYFR YAGFAERLRKTAQVRKARGVPGDLYLFVVTNTPDSSDASKTTYDMMKGLGQEQLMPQV QRDLAHDLREKREQLKQVRENLHPDPYVRRGQENNIERLERKIEALEEKGVTPEVEQR LGDLGAQEIPGLAKNTGEDDKPYQLVEVPGLKVVVATLATSDPAPGSPPPARLSAEAE AALGAPPLKARYKHIYVHSKLLLVDDLYTLLSSANINVRSMHGDSELGVAQPNPDLAR AMREELWELHAQKVATTTEKNFKLWNQKMDANWRQQRKDEPLVANLLRFWDVVTPYSP GLTVD" misc_feature complement(<5729162..5729350) /locus_tag="PA5089" /note="Catalytic domain of phospholipase D superfamily proteins; Region: PLDc_SF; cl15239" /db_xref="CDD:472788" misc_feature complement(5727389..>5728651) /locus_tag="PA5089" /note="Phosphatidylserine/phosphatidylglycerophosphate/car diolipin synthase [Lipid transport and metabolism]; Region: Cls; COG1502" /db_xref="CDD:441111" gene complement(5729473..5731845) /locus_tag="PA5090" /db_xref="GeneID:882228" CDS complement(5729473..5731845) /locus_tag="PA5090" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253777.1" /db_xref="GeneID:882228" /translation="MFAPANQTHFSLRIENLRHDFQVLAFRGREAISQPFRFDLELVS ERSDLDLDALLHQPAFLILSPSGQGVHGQLTSIAQGDSGKRLTGYRATLEPRLAYLGL CSDQRIFQRLSVPEIIGRVLEGHGILADAYRFQLGPTPYPAREYCTQYDETDLAFLSR LCEEEGIHYHHEFSAQGHVLVFGDDQTSFPRLQRPVAYVQDAGLVADQPVVKRFGVRF DTRASRVTRRDYDFEQPALQMQAAHGPQPGAQQPDLEDYDYPGRFTHRERGKHLSHRA LERHRADYLQARGESDEPALLSGHFLTLSAHPRGEWNDLWLLTEVLHEGRQPQVLEES IDSDVAQGQGDFRQGYRNHFVATPWSAHFRPPLEHPRPRVLGCQTAVVTGPAGETIHC DQYGRVKVQFFWDRLGQADDNTSCWLRVASNWGGKRYGGVAIPRVGMEVLVGFLEGDP DQPLVTGCLYHSENRVPYELPQNKTRSVFKTDSYPGGGGFNELRIEDRKGQEQIFVHA QRDWDENIEHDQKIRVGHERHDTVEGDSYSEFRAEEQRTVHADRKVELKAADHLSVAD ALHLRIGTGQFVEAGDEIHFKAGDKVVIEAGMELTLKGGGSFARLDPGGVTLDGAQVM INSGGSPGIGSGVRALSPLQPLAADAAAAGGALLGAIAQKIGEAPQKLLRFELSPLPG VASAARQPYRLYANGAFKEEGIADEGGAISFEPLPGERTYRIETANGHAYEVEMVDQP DALQADDRLAQQGFRDYRAEMPQHKPRSAPDAYRRDASRPGAADKDEPTP" misc_feature complement(5730259..5731818) /locus_tag="PA5090" /note="type VI secretion system Vgr family protein; Region: VI_Rhs_Vgr; TIGR03361" /db_xref="CDD:274542" gene complement(5732116..5732916) /gene="hutG" /locus_tag="PA5091" /db_xref="GeneID:882229" CDS complement(5732116..5732916) /gene="hutG" /locus_tag="PA5091" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="N-formylglutamate amidohydrolase" /protein_id="NP_253778.1" /db_xref="GeneID:882229" /translation="MDEVLSFKRGRVPLLISMPHPGTRLTPAVDAGLVEEARALTDTD WHIPRLYDFAEELGASTLAAHYSRYVVDLNRPSDDKPLYSTATTGLYPDTLFDGRPLY REGMAPSAEERMRYLAEVWTPYHRTIAEELARLKAEFGYALLWDAHSIRSHVPHLFDG RLPDFNLGTNAGASCDPALAARLEAVCAAAEGYSHVLNGRFKGGHITRHYGQPEQHVH AVQLELAQCTYMDEQAPFAYRADLAEATRAVIRELLESLLAWGRERYA" misc_feature complement(5732128..5732910) /gene="hutG" /locus_tag="PA5091" /note="N-formylglutamate amidohydrolase; Region: FGase; cl01522" /db_xref="CDD:470234" gene complement(5732909..5734117) /gene="hutI" /locus_tag="PA5092" /db_xref="GeneID:878339" CDS complement(5732909..5734117) /gene="hutI" /locus_tag="PA5092" /EC_number="3.5.2.7" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="imidazolonepropionase" /protein_id="NP_253779.1" /db_xref="GeneID:878339" /translation="MKRLWQHCHAATLKGGKYSIVEDAALVTDGPLIHWIGPRAELPP GDYAERIDLGGAWLTPGLIDCHTHAVFGGNRSGEFEQRLEGVSYAEIAAAGGGIASTV RATREASEEELLASARKRLEPLLRDGVTALEIKSGYGLDLASERKMLRVIRRLGERLP ATVRSTCLAAHALPPEYAGRADDYIEHICSTMLPALAGEGLVDAVDAFCEHLAFSPAQ VERVFIAARELGLPVKLHAEQLSSLHGSSLAARYRALSADHLEYMTEDDARAMGEAGT VAVLLPGAFYLLRETQLPPIDALRRHGVAMAIASDLNPGTSPALSLRLMLNMACTLFR LTPEETLAGVTLHAARALGLEASHGSLEVGKLADFVAWDIERPAELAYWLGGDLPKRV IRHAEEVYRG" misc_feature complement(5732927..5734057) /gene="hutI" /locus_tag="PA5092" /note="imidazolonepropionase; Region: hutI; TIGR01224" /db_xref="CDD:273512" misc_feature complement(order(5733185..5733187,5733341..5733343, 5733401..5733403,5733410..5733412,5733914..5733916, 5733920..5733922)) /gene="hutI" /locus_tag="PA5092" /note="active site" /db_xref="CDD:238621" gene complement(5734114..5735646) /locus_tag="PA5093" /db_xref="GeneID:878340" CDS complement(5734114..5735646) /locus_tag="PA5093" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="histidine/phenylalanine ammonia-lyase" /protein_id="NP_253780.1" /db_xref="GeneID:878340" /translation="MSDLPSVVFGDGPLRWQELVAVARHGARLELSAAAWARIDNARA IVCRIVANGERAYGISTGLGALCDVLLEGEQLAELSRNTLLSHACGVGEPLRDEQTRA IICAAVANYSQGKSGLDRSLVEGLLALLNHGITPQVPAQGSVGYLTHMAHVGIALLGI GEVSYRGSVVPAAAALAAEGLATVRLGAKDGLCLVNGTPCMTGLACLALDDAQRLAQW ADVIGAMSFEALRGQLAAFDAEIVALKPHPGMQRVAANLRALLAGSQVLENARGIRTQ DALSIRSIPQIHGACRDQLAHAARQIETELNSATDNPLLLGTPEAYRVVSQANPHGES VAMAADLLAIAVAELGGVAERRLDRLVNPLVSGLPAFLVGKPGVNSGMMITQYVAASL AGENRQLAQPAVVDNFVTSALQEDHLSLGTSAALKLGRALENLRRILAIEYLLAAQAF EFLAPQRFGQGTAAAWGILRERVPAYDTDRWLAPDIASAAAILGERKSLARLAASIGD LQ" misc_feature complement(5734141..5735634) /locus_tag="PA5093" /note="Histidine ammonia-lyase [Amino acid transport and metabolism]; Region: HutH; COG2986" /db_xref="CDD:442225" gene complement(5735643..5736473) /locus_tag="PA5094" /db_xref="GeneID:878341" CDS complement(5735643..5736473) /locus_tag="PA5094" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_253781.1" /db_xref="GeneID:878341" /translation="MSGAQMNKIEVKNVFKIFGPRADAALALIRQGRSKGEVLAQTGC VVGVNDLSLSIGAGEIFVIMGLSGSGKSTLVRHFNRLIDPTSGEILVDGEDILRYDME ALRQFRRRKISMVFQSFGLLPHKSVLDNVAYGLKVRGESRAQCHERALHWIATVGLKG YEKSYPHQLSGGMRQRVGLARALAADTEIILMDEAFSALDPLIRADMQDQLLELQKTL HKTIVFITHDLDEAVRIGNRIAILKDGQLIQVGTPREILHQPADDYVDRFVQRRVANL " misc_feature complement(<5735664..5736458) /locus_tag="PA5094" /note="ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]; Region: ProV; COG4175" /db_xref="CDD:443334" gene complement(5736470..5737321) /locus_tag="PA5095" /db_xref="GeneID:879514" CDS complement(5736470..5737321) /locus_tag="PA5095" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_253782.1" /db_xref="GeneID:879514" /translation="MFPERLTFSIANWVNAWVDALVTNYGDLFRKISDTLLWAIVNLE GLLRATPWWLLLAIVAAIAWHATRRLLPTLVITGLLFLVGAVGLWDKLMQTLALMLVA TFISVLIGIPLGILAARSNRLRAVLMPLLDIMQTMPSFVYLIPVLMLFGLGKVPAIFA TVIYAAPPLIRLTDLGIRQVDSEVMEAVNAFGANRWQQLFGVQLPLALPSIMAGINQT TMMALSMVVIASMIGARGLGEDVLVGIQTLNVGKGLEAGLAIVILAVVIDRITQAYGR SRHETSK" misc_feature complement(5736497..5737318) /locus_tag="PA5095" /note="ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism]; Region: ProW; COG4176" /db_xref="CDD:443335" gene complement(5737346..5738314) /locus_tag="PA5096" /db_xref="GeneID:879515" CDS complement(5737346..5738314) /locus_tag="PA5096" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_253783.1" /db_xref="GeneID:879515" /translation="MRYKKSMLSVLCALGLLAAAAGAQAEGWCESGKAVKFAGLNWES GTLLTELMQFVLAKGYGCTTDSLPGNSITMEQALSTNDIQVFAEEWIGRSDAWNKAAA AGKVVGVGEPIVGAVEGWYVPRYVIEGDPQRKLEAKAPKLRSIADLAQYAEVFRDPEE PGKGRFYNCPAGWTCELENSEMLKSYGLEETFTNFRPGTGPALDAAVLSSYRRGEPIL FYYWSPTPLMGRAGLVRLEERPGVDKRIRIQVGLSRTFHDQAPELVAVLEKVNLPAEL LNSDLARMAKDRIDAARLAREFLKEHPEVWHAWVDEDAAKKIEAAL" misc_feature complement(5737385..5738212) /locus_tag="PA5096" /note="Substrate-binding domain of ABC-type histidine transporter involves in betaine and proline uptake; the type 2 periplasmic-binding protein fold; Region: PBP2_HisX_like; cd13641" /db_xref="CDD:270359" misc_feature complement(order(5737649..5737651,5737793..5737798, 5737808..5737810,5737961..5737963,5738045..5738047, 5738183..5738185,5738189..5738191)) /locus_tag="PA5096" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:270359" gene complement(5738432..5739835) /locus_tag="PA5097" /db_xref="GeneID:878367" CDS complement(5738432..5739835) /locus_tag="PA5097" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_253784.1" /db_xref="GeneID:878367" /translation="MTHDTGLRRGLNARHIRFMALGSAIGTGLFYGSASAIQMAGPAV LLAYLVAGAAVYMVMRALGEMAVHEPVSGSFGHYASSYLGPLAGFVTGWTYAFEMIIV CLADVTAFGIYMGFWFPDVPRWIWVLSIVLFIGGLNLCHVKVFGELEFWLSLVKVGAI VAMILAGLGIMFFGFSLGGAATSATGVHNLWQHGGFLPNGWAGLVASLSVVVFAFGGI EIIGITAGEAQDPQRVIPRAINAVPLRILLFYVLTLFVLMAIFPWQQIGSNGSPFVQI FDGLGIESAAAILNVVVITAAISAINSDIFGAGRMLYGMARQGQAPVGFSRVSRHGVP WMTVLLMAVALLLGVALNYLIPQSVFLLIASIATFATVWVWLMILLAQVGMRRRMGPR QVAALKFPVPLWPFAPAAAIVFMLFIFVVLGYFPDTRPALWVGAIWIALLVIAYRRWV RPKGDAAHGVLQAQGGL" misc_feature complement(5738474..5739832) /locus_tag="PA5097" /note="L-asparagine transporter or related permease [Amino acid transport and metabolism]; Region: AnsP; COG1113" /db_xref="CDD:440730" gene complement(5739898..5741427) /gene="hutH" /locus_tag="PA5098" /db_xref="GeneID:878368" CDS complement(5739898..5741427) /gene="hutH" /locus_tag="PA5098" /EC_number="4.3.1.3" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="histidine ammonia-lyase" /protein_id="NP_253785.1" /db_xref="GeneID:878368" /translation="MSLHLKPGQLTLADLRQAYLAPVRLSLDPSADAPIAASVACVEN IIAEGRTAYGINTGFGLLASTRISPADLEKLQRSIVLSHAAGVGEALDDAMVRLVMLL KVNSLARGFSGIRRKVIDALIALINAEVYPHIPLKGSVGASGDLAPLAHMSLVLIGES RARHRGEWLPAAEALAVAGLEPLTLAAKEGLALLNGTQVSTAYALRGLFEAEDLFAAA TVCGGLSVEAMLGSRAPFDARIHAARGQRGQIDVAAAYRDLLTASSEVARSHEKCDKV QDPYSLRCQPQVMGACLTQMRQAAEVLEIEANAVSDNPLVFAAEGDVISGGNFHAEPV AMAADNLALALAEIGSLSERRISLMMDMHMSQLPPFLVANGGVNSGFMIAQVTAAALA SDNKALAHPASVDSLPTSANQEDHVSMAPNAGKRLWAMAENVRGILAVEWLGACQGLD FREGLKSSPKLEQARRLLRDKVPYYQEDRFFAPDIEAASQLLASGCLNALLPARLLPS L" misc_feature complement(5739925..5741427) /gene="hutH" /locus_tag="PA5098" /note="histidine ammonia-lyase; Provisional; Region: PRK09367" /db_xref="CDD:236484" misc_feature complement(order(5740453..5740455,5740489..5740491, 5740579..5740581,5740588..5740590,5740843..5740845, 5740855..5740869,5741191..5741193,5741200..5741202, 5741251..5741253,5741257..5741259,5741263..5741271)) /gene="hutH" /locus_tag="PA5098" /note="active sites [active]" /db_xref="CDD:176460" misc_feature complement(order(5740129..5740134,5740141..5740143, 5740150..5740155,5740171..5740173,5740180..5740200, 5740231..5740242,5740246..5740263,5740267..5740269, 5740273..5740284,5740288..5740293,5740297..5740302, 5740336..5740338,5740345..5740347,5740354..5740356, 5740366..5740368,5740378..5740380,5740387..5740389, 5740408..5740410,5740420..5740422,5740429..5740434, 5740438..5740458,5740462..5740464,5740477..5740485, 5740498..5740503,5740510..5740515,5740522..5740527, 5740534..5740536,5740543..5740548,5740564..5740569, 5740576..5740581,5740585..5740593,5740597..5740599, 5740681..5740683,5740690..5740692,5740696..5740701, 5740708..5740713,5740966..5740968,5740975..5740977, 5741014..5741019,5741101..5741103,5741164..5741187, 5741194..5741196,5741251..5741256)) /gene="hutH" /locus_tag="PA5098" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:176460" gene complement(5741524..5742966) /locus_tag="PA5099" /db_xref="GeneID:880889" CDS complement(5741524..5742966) /locus_tag="PA5099" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_253786.1" /db_xref="GeneID:880889" /translation="MTQGSDSKPLIERRSIDYIPANERHGRLYSQFTLWLGANLQITA IVTGALAVVLGGDVFWSLVGLLLGQLLGGAVMALHAAQGPRLGLPQMISSRVQFGVYG ACIPIALVCLMYLGFTATGTVLSGQAIGQLTGLSDSAGIFIFAAFIVLVTVLGYRVIH IIGRIASVLGIIAFAYLFSRLMLLSDIGDLLAIRHFSWASFLLAVSLAASWQIAFGPY VADYSRYLPASTSSWKTFLAVGLGSVLGAQASMVLGVFSAALANGQFAGREVAYIVGL GSSGTVAALLYFSIAFGKVTISTLNSYGSFMCIATIISSVRGQLEITRVQRLFFVLAI VGASTLIALLGQHSFLAAFKSFILFLLTFFTPWSAVNLVDYYFITRERYDVPALADPD GRYGRWNLPGIAVYTLGVLVQMPFLATTLYTGPMVEHLGGVDISWIIGLLVPAVLYYL VARRKATRQAPARMILPADPGAFEHPAHGA" misc_feature complement(5741581..5742963) /locus_tag="PA5099" /note="Purine-cytosine permease or related protein [Nucleotide transport and metabolism]; Region: CodB; COG1457" /db_xref="CDD:441066" gene complement(5743074..5744753) /gene="hutU" /locus_tag="PA5100" /db_xref="GeneID:880890" CDS complement(5743074..5744753) /gene="hutU" /locus_tag="PA5100" /EC_number="4.2.1.49" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="urocanate hydratase" /protein_id="NP_253787.1" /db_xref="GeneID:880890" /translation="MTTPSKFRDIEIRAPRGTTLTAKSWLTEAPLRMLMNNLDPEVAE NPRELVVYGGIGRAARNWECYDRIVETLKQLNDDETLLVQSGKPVGVFKTHANAPRVL IANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQH YDGNLKGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLRSRYVDEQAKD LDDALARIQRYTAEGKAISIALLGNAAEILPELVRRGVRPDMVTDQTSAHDPLNGYLP AGWSWEEYRDRAQTDPAAVVKAAKQSMAVHVRAMLAFQQQGVPTFDYGNNIRQMAKEE GVANAFDFPGFVPAYIRPLFCRGIGPFRWAALSGDPQDIYKTDAKVKQLIPDDAHLHR WLDMARERISFQGLPARICWVGLGLRAKLGLAFNEMVRTGELSAPIVIGRDHLDSGSV ASPNRETEAMQDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVC DGSDEAAERIARVLTNDPGTGVMRHADAGYQVAIDCAKEQGLNLPMITAQR" misc_feature complement(5743086..5744753) /gene="hutU" /locus_tag="PA5100" /note="urocanate hydratase; Provisional; Region: PRK05414" /db_xref="CDD:235448" gene complement(5745079..5745876) /locus_tag="PA5101" /db_xref="GeneID:879484" CDS complement(5745079..5745876) /locus_tag="PA5101" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253788.1" /db_xref="GeneID:879484" /translation="MIDTPVVAALDMYVEPDCVRQAGATFIGEVCRRLGVRRYASAAT DLAVQWRQPNLLFAQTCGYPLMTQLRGQVAVLAVPSYDLPDCAPGEHCSLFVAAEGQA RQRLGDFRNTRLALNDHDSNSGMNLLRHALAPLGRDSAFFAEVHISGGHLRSLAMVAA GEVELTSVDAVTFGYLQRHAPERLDGLRVLGRSAPSPALPLITSLHWSAAQRRELFEA LNLTLIECPHLAATLALKSFLPAGEEHYRILLDYERQAQGWGYPQLR" misc_feature complement(5745106..5745783) /locus_tag="PA5101" /note="ABC-type phosphate/phosphonate transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: PhnD; COG3221" /db_xref="CDD:442454" gene complement(5745895..5746833) /locus_tag="PA5102" /db_xref="GeneID:879485" CDS complement(5745895..5746833) /locus_tag="PA5102" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253789.1" /db_xref="GeneID:879485" /translation="MAHYLSGRQRTLVRRLQDTFQARSEWPTWLLVACLYGGWALLAS QYERWGWPVLAGLVPFASLYMSLQHELIHGHPTRWPRFNAMLGYLPLAVWYPYPLYRD SHLRHHLDEQLTYPGLDPESRYVSLSEWPRLGSWRRRWLCLDKTLLGRATLGPLLALA AMARLEGSRLRRGEGAAWRLWGLHAVLLGGLLAGLWRWAGIPPWLYLPAVAYPALGLS MLRSFYEHRPAREPAQRSVLVDAGWPWRLLFLNNNLHLVHHDLPGLPWYLLPRVYSAS RRAYRRRSGDFHLPGYGRLWRRHGWRPVDAPVHPEH" misc_feature complement(5745901..5746761) /locus_tag="PA5102" /note="The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins. They are present in all groups of organisms with the...; Region: Membrane-FADS-like; cl00615" /db_xref="CDD:445012" misc_feature complement(order(5746057..5746062,5746069..5746071, 5746510..5746515,5746522..5746524,5746615..5746617, 5746627..5746629)) /locus_tag="PA5102" /note="putative di-iron ligands [ion binding]; other site" /db_xref="CDD:238511" gene complement(5746849..5747871) /locus_tag="PA5103" /db_xref="GeneID:883032" CDS complement(5746849..5747871) /locus_tag="PA5103" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253790.1" /db_xref="GeneID:883032" /translation="MPPLRQILAVLALGASLASQTAVAAECPYPGKVVFAGLNWESGM FTTDLLRYVLEKGYGCETDALPGNTVTMENALRQNDIQVTGEQWAGRSPVWRAAEEAG EVFSVGETVKGATEGWWVPEYLVKGDPQRGIEAKAPELRSVADLPRYKALFRDPEEPA KGRFYNCPTGWTCEIVNSQKLKAYRLQDSYTNFRTGTGPALDAAISAAFRRGEPVLFY YWSPTPLMGRFKLVQLEEPPFSEKAWATLSDPKNPDPIGSRSLPAKITVGVSRDFHDK APALVELFRKVEIPLPLFNELLADMAQNHREVGEVRAQFLRQHREIWSHWVPAEVAAR LDTSLK" misc_feature complement(5746891..5747778) /locus_tag="PA5103" /note="Substrate-binding domain of ABC-type histidine transporter involves in betaine and proline uptake; the type 2 periplasmic-binding protein fold; Region: PBP2_HisX_like; cd13641" /db_xref="CDD:270359" misc_feature complement(order(5747212..5747214,5747356..5747361, 5747371..5747373,5747524..5747526,5747608..5747610, 5747746..5747748,5747752..5747754)) /locus_tag="PA5103" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:270359" gene complement(5748013..5748603) /locus_tag="PA5104" /db_xref="GeneID:883033" CDS complement(5748013..5748603) /locus_tag="PA5104" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253791.1" /db_xref="GeneID:883033" /translation="MSELRILRAVDYPRMPWKNGAGSTEEIARDGGDGLDGFGWRLSI ADVGESGGFSGFAGYQRIISVLEGGGMRLRVDGAESAPLRARQAFAFSGDSEVHCTLL DGAIRDFNLIYAPRRHRARLQWLRVEGELDWHGTASTLLLFAQQDGVAISLQGQPRGQ LAAHDCLCAEGLQGLQHWRLTAHEPAWVCAVELDSL" misc_feature complement(5748016..5748603) /locus_tag="PA5104" /note="Various environmental stresses-induced protein Ves (function unknown) [Function unknown]; Region: Ves; COG3758" /db_xref="CDD:442972" gene complement(5748600..5749352) /gene="hutC" /locus_tag="PA5105" /db_xref="GeneID:883034" CDS complement(5748600..5749352) /gene="hutC" /locus_tag="PA5105" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="histidine utilization repressor HutC" /protein_id="NP_253792.1" /db_xref="GeneID:883034" /translation="MTSSSSDRSPLASQLGEVPAPLYARVKQMIVSQIQSGAWPPHHR VPSESELVSQLGFSRMTINRALRELTSDGLLVRMQGVGTFVAEPKGQSALFEVHNIAD EIAARGHRHRCQVITLGEEVAGPERALALDVREGQRVFHSLIVHYENDIPVQIEDRYV NAAVAPDYLKQDFTRQTPYAYLTQVAPLTEGEHVVEAILAEPAECKLLQIERGEPCLL IRRRTWSGRVAVTAARLLHPGSRHRLEGRFSS" misc_feature complement(5748603..5749292) /gene="hutC" /locus_tag="PA5105" /note="histidine utilization repressor, proteobacterial; Region: his_ut_repres; TIGR02018" /db_xref="CDD:188194" gene 5749453..5750814 /locus_tag="PA5106" /db_xref="GeneID:880703" CDS 5749453..5750814 /locus_tag="PA5106" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="N-formimino-L-glutamate deiminase" /protein_id="NP_253793.1" /db_xref="GeneID:880703" /translation="MSAIFAERALLPEGWARNVRFEISADGVLAEIRPDANADGAERL GGAVLPGMPNLHSHAFQRAMAGLAEVAGNPNDSFWTWRELMYRMVARLSPEQIEVIAC QLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGIGLTLLPVLYS HAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGHSLGLCFHSLRAVTPQQIAT VLAAGHDDLPVHIHIAEQQKEVDDCQAWSGRRPLQWLYENVAVDQRWCLVHATHADPA EVAAMARSGAVAGLCLSTEANLGDGIFPATDFLAQGGRLGIGSDSHVSLSVVEELRWL EYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQALGQPIGSLAVGRRADLLVLDG NDPYLASAEGDALLNRWLFAGGDRQVRDVMVAGRWVVRDGRHAGEERSARAFVQVLGE LLD" misc_feature 5749453..5750811 /locus_tag="PA5106" /note="N-formimino-L-glutamate deiminase; Validated; Region: PRK09229" /db_xref="CDD:236420" misc_feature order(5749618..5749620,5749624..5749626,5750146..5750148, 5750257..5750259,5750410..5750412) /locus_tag="PA5106" /note="active site" /db_xref="CDD:238638" gene complement(5750961..5751530) /gene="blc" /locus_tag="PA5107" /db_xref="GeneID:880704" CDS complement(5750961..5751530) /gene="blc" /locus_tag="PA5107" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein Blc" /protein_id="NP_253794.1" /db_xref="GeneID:880704" /translation="MIGLPIRVLCTLWLGLLLVGCAGSPKNPPATEQVDLQRYQGTWY ELARLPMFFQRNCAQSEAHYRLQEDQSIQVINRCLTLDGDWEQVAGRAVAQQPGRTDK LWVRFDNWFANLFPNVARGDYWVLAVDDDYRTALVGNPNREYLWLLSRTPQVSQQTRE RLLEEARSRGYAVDELIWRVPDGQLKRSQ" misc_feature complement(5750988..5751431) /gene="blc" /locus_tag="PA5107" /note="Lipocalin-like domain; Region: Lipocalin_2; pfam08212" /db_xref="CDD:400495" gene complement(5751527..5751784) /locus_tag="PA5108" /db_xref="GeneID:877605" CDS complement(5751527..5751784) /locus_tag="PA5108" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253795.1" /db_xref="GeneID:877605" /translation="MASFRTLAVVAFCVVLAACSKINQENYSKLKAGMSKAEVEAILG KPTECSGALGMSSCTWGDEKAFISVQYAADKALLFSGQGLK" misc_feature complement(<5751644..5751784) /locus_tag="PA5108" /note="SmpA / OmlA family; Region: SmpA_OmlA; cl46449" /db_xref="CDD:480789" gene complement(5751857..5752459) /locus_tag="PA5109" /db_xref="GeneID:877606" CDS complement(5751857..5752459) /locus_tag="PA5109" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253796.1" /db_xref="GeneID:877606" /translation="MSAPWETLLDWWFGTSSDAAEVVAQRNGLWFGKNVCQDADAGGR FGDLVNQALDGGLQEWTAEADGWLALILLLDQLPRMIYRDTPRAYAGDARAQRVVREG LEKGFDRQLPPVRRVFAYLVLEHAEDLPSQERAVACFRDLRDQVGGSVRKPFDDFYDY AERHHAVVARFGRFPHRNAILGRPSSEEETAFLREPGSRF" misc_feature complement(5751872..5752435) /locus_tag="PA5109" /note="Bacterial protein of unknown function (DUF924); Region: DUF924; pfam06041" /db_xref="CDD:428735" gene complement(5752464..5753474) /gene="fbp" /locus_tag="PA5110" /db_xref="GeneID:882240" CDS complement(5752464..5753474) /gene="fbp" /locus_tag="PA5110" /EC_number="3.1.3.11" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="fructose-1,6-bisphosphatase" /protein_id="NP_253797.1" /db_xref="GeneID:882240" /translation="MSRVTLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKG ALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQIPGRY PKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNEYLNQNDTLREEAFLQPGTTQVA AGYAIYGPQTMLMLTLGNGVKGFTLDRELGSFVLTHDNISVPESTAEFAINMSNQRHW EAPVKRYVEELLAGKEGPLGKNYNMRWIASMVADVHRILTRGGVFMYPRDAREPEKPG KLRLMYEANPMSFIIEQAGGAATNGTQRILDIKPENLHQRVAVFLGSKQEVERITGYH AE" misc_feature complement(5752467..5753474) /gene="fbp" /locus_tag="PA5110" /note="Fructose-1,6-bisphosphatase [Carbohydrate transport and metabolism]; Region: Fbp; COG0158" /db_xref="CDD:439928" protein_bind complement(5752844..5752856) /gene="fbp" /locus_tag="PA5110" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(5753614..5754144) /gene="gloA3" /locus_tag="PA5111" /db_xref="GeneID:882241" CDS complement(5753614..5754144) /gene="gloA3" /locus_tag="PA5111" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="lactoylglutathione lyase" /protein_id="NP_253798.1" /db_xref="GeneID:882241" /translation="MSFNTEVQPGICMEPDAITQEYVFNHTMLRVKDPKRSLDFYSRV LGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGRQSVLELTHNWGSESD DSQYHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVKPLDRGMKNVAFISDPDGY WVEIVQASLNGEMGRG" misc_feature complement(5753650..5754075) /gene="gloA3" /locus_tag="PA5111" /note="Glyoxalase I that uses Zn(++) as cofactor; Region: GlxI_Zn; cd07233" /db_xref="CDD:319900" misc_feature complement(order(5753656..5753658,5753665..5753667, 5753749..5753751,5753773..5753802,5753854..5753859, 5753869..5753874,5753878..5753880,5753944..5753946, 5753956..5753958,5753986..5753991,5753998..5754000, 5754007..5754009,5754016..5754021,5754028..5754033, 5754040..5754045,5754055..5754057,5754061..5754075)) /gene="gloA3" /locus_tag="PA5111" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319900" misc_feature complement(order(5753656..5753658,5753662..5753664, 5753686..5753688,5753692..5753694,5753719..5753721, 5753791..5753793,5753857..5753859,5753863..5753865, 5753869..5753871,5753959..5753961,5753965..5753967, 5753980..5753982,5754055..5754057,5754067..5754069)) /gene="gloA3" /locus_tag="PA5111" /note="active site" /db_xref="CDD:319900" misc_feature complement(order(5753662..5753664,5753686..5753688, 5753692..5753694,5753719..5753721,5753857..5753859, 5753863..5753865,5753959..5753961,5753965..5753967, 5753980..5753982,5754055..5754057)) /gene="gloA3" /locus_tag="PA5111" /note="glutathione binding site [chemical binding]; other site" /db_xref="CDD:319900" gene complement(5754298..5756238) /gene="estA" /locus_tag="PA5112" /db_xref="GeneID:878826" CDS complement(5754298..5756238) /gene="estA" /locus_tag="PA5112" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="esterase" /protein_id="NP_253799.1" /db_xref="GeneID:878826" /translation="MIRMALKPLVAACLLASLSTAPQAAPSPYSTLVVFGDSLSDAGQ FPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPVNA QQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRARQGLGADP NALYYITGGGNDFLQGRILNDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTP ATFGGPLQPFASQLSGTFNAELTAQLSQAGANVIPLNIPLLLKEGMANPASFGLAADQ NLIGTCFSGNGCTMNPTYGINGSTPDPSKLLFNDSVHPTITGQRLIADYTYSLLSAPW ELTLLPEMAHGTLRAYQDELRSQWQADWENWQNVGQWRGFVGGGGQRLDFDSQDSAAS GDGNGYNLTLGGSYRIDEAWRAGVAAGFYRQKLEAGAKDSDYRMNSYMASAFVQYQEN RWWADAALTGGYLDYDDLKRKFALGGGERSEKGDTNGHLWAFSARLGYDIAQQADSPW HLSPFVSADYARVEVDGYSEKGASATALDYDDQKRSSKRLGAGLQGKYAFGSDTQLFA EYAHEREYEDDTQDLTMSLNSLPGNRFTLEGYTPQDHLNRVSLGFSQKLAPELSLRGG YNWRKGEDDTQQSVSLALSLDF" misc_feature complement(5754301..5756235) /gene="estA" /locus_tag="PA5112" /note="esterase EstP; Region: esterase_EstP; NF041609" /db_xref="CDD:469493" gene complement(5756347..5757741) /locus_tag="PA5113" /db_xref="GeneID:878827" CDS complement(5756347..5757741) /locus_tag="PA5113" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253800.1" /db_xref="GeneID:878827" /translation="MTRSFSFRTAGLLLLGACLSLPLSAKESAEGFSRQVALSLQGEG PWYRLSIPMSVQLSAAHADLRDLRVFDAEGEALPYALVAGSERQASTPHEAEVRLFPL RGTSAADATQPNLRVQRNTSGTIVEVLPENAGPAAETLRGWLIDASAVTFPLERLRLD WSSPEEGFQRFSVEASDDLEHWQAWGDGQIARLTFNGERIDVSEVKLPGRQARYLRLA WPAGATAADLHGARLQGSTRSTEPAPMIWSEPLAGRQAGDGEYRWQLPLALPLQRVRV SLEQALTHTIVPVELSGRDRTENASPRREAAWSSLARGVLYRLPIDGRNVQQNELELP GWAVRELRLQVDQRGTGLGPEVPSLSVGLPASELVFLVRGSPPYRLAFGKPGAQSAAL PLGVLIPGYTESKRATLGSASLGEPLEVAMAVAAPAPGSDWKKIGLWAVLLLGVALLV IMAMSLLRSSPNKP" misc_feature complement(5756374..5757642) /locus_tag="PA5113" /note="Protein of unknown function (DUF3999); Region: DUF3999; pfam13163" /db_xref="CDD:433003" gene complement(5757738..5761343) /locus_tag="PA5114" /db_xref="GeneID:877642" CDS complement(5757738..5761343) /locus_tag="PA5114" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253801.1" /db_xref="GeneID:877642" /translation="MQWIFMLVGLILGGFAGESLVGALLGGLSGLALGQAVSLQNLAQ QNERLRKQMSEFAERFERGTEVIHQRLLRVERQAQDLPESVPEPAAGIDQPLADTPPA PPAEVAPPLDWDIELPAVEAAPPPPRPPEPVQPIERQPAFQPDAQPAPRRAAPPAPPR EPSLVERGFAAAKGWLFGGNTVLRIGVVLLFIGLAFLLRYASERVAVPVEYRYAGVAL AAMALLGVGWWLRERRAAYGLILQGTGIAVLYLTIFAAMRLHPLISPGAALALLVVVT ICSAILAVLQNAMGLAVVAALGGFAAPILTSTGSGNHVALFSYFALLNAGIFAIAWFR AWRPLNLVGFVGTFGIGFAWGLRSYTPELFASTEPFLALFFLMYVGIGLLFARRKLLE AAQAPAERGELLRWSARQADYIDATVLFGPPLVGFGLQCAVIGHIDFGMAFSALALGL FYMVLARVLRGHASAGRTSLLVEICLALGVVFGTLAIPLGLDARWTSAAWAVEGAGIY WLGLHQQRRLARLFALLLQGGAALAYLNGVRPGETTLLEGSPLGALMLGAAALFSFWQ LRRAPAKALADWEPACRPLLAAAGLAFLYLVAPLCLAVDGTAIAWAVAGLASLFAGLR LGSRTFLFCAFAVQLLGGALFLLHLQGGDGQGGVFDSGWRGLMTASLIGLALIGGMLL AARDPLVKDDSRLLMGLSLVLLAGLAFVNLAVLFVLPWRSASAVWAGSGLLIIWLSLV LRQRLSFYFGLALQVVGGLAFLLAGPSLFGSLSGEGLRPLAHSGFWTPAVLALAALVG AWRLRRAGERERALGIGTLGLAELSHLLLLWGAGWWALTALCETVRFVPYGLREHALL LVAAATVASWMLLALRERWRELALLCLALVPVALLALASAWRFDYQPFGEFGWLAWPL LFATHLLSLRRLAPLLPAKALSVAHVLGCWLLLGVLALELRYLFALLAEQYNAWRWLG WALVPSAYLLLVAGGRSLPWPLRDFPREYRLLAAAPVALLLLGWFWSANLLSDGAAEP LPYLPLANPLELGLLIVLFALYRWSDASLASLVDGNASARLGRQALAGASLFALLTLA VCRAAHHLAGVPFQAEALTASMLVQAGLSLVWTLCALGLTIAGTRLGRRDLWMVGAAL VGVVVVKLFFVELGNSGSLERIISFIGVGVLLLVVGYFSPLPPRRAEVASEAEQP" misc_feature complement(5758890..5761343) /locus_tag="PA5114" /note="Uncharacterized membrane protein [Function unknown]; Region: COG5373" /db_xref="CDD:444140" misc_feature complement(5757747..>5759231) /locus_tag="PA5114" /note="Uncharacterized membrane protein [Function unknown]; Region: COG5373" /db_xref="CDD:444140" gene complement(5761482..5762066) /locus_tag="PA5115" /db_xref="GeneID:877643" CDS complement(5761482..5762066) /locus_tag="PA5115" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253802.1" /db_xref="GeneID:877643" /translation="MWDERYAAEEYVYGTEPNAFLKEHAQRLAGPVLSVAEGEGRNAV FLASLGLEVLGVDGSTVGLAKARRLAEAKGVSIDTLVVDLADYEPPAAAFGAVVSIFA HLPSRVRGRLNRLLERSLRPGGLFLLEAYRPEQLGRGTGGPADVDMLVSRAALEAELP ECEVLLAREIEREVVEGRFHTGAACVVQFIARKR" misc_feature complement(5761677..>5762018) /locus_tag="PA5115" /note="Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism]; Region: Cfa; COG2230" /db_xref="CDD:441831" gene 5762150..5762575 /locus_tag="PA5116" /db_xref="GeneID:879600" CDS 5762150..5762575 /locus_tag="PA5116" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253803.1" /db_xref="GeneID:879600" /translation="MRQLDIGEVARRSGVPASTLRYYEEKGLIASSGRHGLRRLFDAG VLERLALIGLGRAAGLSLDEIAGMGAADGALRIDRAALAAKADELDRTIRRLAAMRDG LRHAAACPAREHMDCPTFRRLLRAAAAGAIKPRRKAPGA" misc_feature 5762159..5762509 /locus_tag="PA5116" /note="Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily; Region: HTH_MerR-like_sg6; cd04781" /db_xref="CDD:133408" misc_feature order(5762162..5762170,5762210..5762212,5762258..5762266) /locus_tag="PA5116" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133408" misc_feature order(5762300..5762302,5762309..5762311,5762321..5762326, 5762351..5762353,5762393..5762395,5762405..5762407, 5762423..5762425,5762435..5762437,5762444..5762449) /locus_tag="PA5116" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:133408" misc_feature order(5762474..5762476,5762498..5762500) /locus_tag="PA5116" /note="putative metal binding residues [ion binding]; other site" /db_xref="CDD:133408" gene complement(5762659..5764476) /gene="typA" /locus_tag="PA5117" /db_xref="GeneID:879601" CDS complement(5762659..5764476) /gene="typA" /locus_tag="PA5117" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="regulatory protein TypA" /protein_id="NP_253804.1" /db_xref="GeneID:879601" /translation="MIENLRNIAIIAHVDHGKTTLVDKLLKLSGTLDRKEAESERVMD SNDQEKERGITILAKNTAIKWNGYNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQ DGPMPQTRFVTQKAFKAGLRPIVVVNKIDRPGARPDWVIDQIFDLFDNLGATDEQLDF PIVYASALNGIAGLDHEKMDDNMDALFQAIIDHVPAPVVDTEGPFQMQISQLDYNSFL GVIGIGRITRGKVKSNTPVVAISDDGSKRNGRILKIMGHHGLQRVEVAEAEAGDIVCV SGMEELFISDTLCDPQNVEALPPLTVDQPTVSMTFQVNDSPFAGREGKFVTSRNIKER LEKELLHNVALRVEPGDSPEKFKVSGRGELHLSVLIETMRREGFELAVGRPEVVIIEK DGEKQEPYENVTIDIEEQHQGSVMEQMGLRKGDLSNMIPDGKGRVRLEYTIPARGLIG FRNNFLTLTSGTGILTSTFSHYGPIKAGEVSNRQNGVLVSMATGTALTYSLETLQSRG KLFLGPGDEIYEGQLAGINSRDNDLVINPTKGKKLDNMRASGKDEVIALVPPIRFTLE QALEFIADDELVEVTPKSIRLRKKMLNENDRKRYERSKV" misc_feature complement(5762665..5764476) /gene="typA" /locus_tag="PA5117" /note="Predicted membrane GTPase TypA/BipA involved in stress response [Signal transduction mechanisms]; Region: TypA; COG1217" /db_xref="CDD:440830" gene complement(5764693..5766147) /gene="thiI" /locus_tag="PA5118" /db_xref="GeneID:877687" CDS complement(5764693..5766147) /gene="thiI" /locus_tag="PA5118" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="thiamine biosynthesis protein ThiI" /protein_id="NP_253805.1" /db_xref="GeneID:877687" /translation="MKLIVKTFQEITIKSRPVRKRFIRQLAKNIRAVLRDLDPELKVE GEWDNLEVETAVVDAKARREMIERLTCTPGIGHFLEVHEYPLGDFDDILAKCKAHFGD QLAGKTFAVRCKRAGKHAFTSMEVERYVGSGLRRECGAAGIDLKQPEVEVRMEIRLDR LFVIHRQHPGLGGYPLGALEQVLVLMSGGFDSTVAAYQMMRRGMISHFVFFNLGGRAH ELGVMEVAHYLWEKYGRSQRVLFVSVPFEEVVGEILTKVDDSYMGVTLKRMMLRAASR VAERLELDALVTGEAISQVSSQTLPNLSVIDRVTDTLVLRPLIVSHKQDIIDTARQIG TAEFARHMPEYCGVISVNPTTQAKPYRVEHEESKFDMAVLERALERATQRTVDRVIDE LGQDLQVEEVGEVLPGQIVIDIRHPDAQEDEPLALEGVEVQALPFYAINSRFKELDAN RQYLLYCDKGVMSRLHAHHLLNEGHTNVRVYRPA" misc_feature complement(5765002..5766141) /gene="thiI" /locus_tag="PA5118" /note="Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis) [Coenzyme transport and metabolism, Translation, ribosomal structure and biogenesis]; Region: ThiI; COG0301" /db_xref="CDD:440070" misc_feature complement(5764699..5764992) /gene="thiI" /locus_tag="PA5118" /note="thiazole biosynthesis domain; Region: ThiI_C_thiazole; TIGR04271" /db_xref="CDD:275094" gene 5766484..5767893 /gene="glnA" /locus_tag="PA5119" /db_xref="GeneID:877688" CDS 5766484..5767893 /gene="glnA" /locus_tag="PA5119" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutamine synthetase" /protein_id="NP_253806.1" /db_xref="GeneID:877688" /translation="MSYKSHQLIKDHDVKWVDLRFTDTKGKQQHVTMPARDALDDEFF EAGKMFDGSSIAGWKGIEASDMILMPDDSTAVLDPFTEEPTLILVCDIIEPSTMQGYE RDPRNIAKRAEEYLKSTGIGDTVFVGPEPEFFIFDEVKFKSDISGSMFKIFSEQASWN TDADIESGNKGHRPGVKGGYFPVPPVDHDHEIRTAMCNALEEMGLVVEVHHHEVATAG QNEIGVKFNTLVAKADEVQTLKYCVHNVADAYGKTVTFMPKPLYGDNGSGMHVHMSIS KDGKNTFAGEGYAGLSETALYFIGGIIKHGKALNGFTNPSTNSYKRLVPGFEAPVMLA YSARNRSASIRIPYVSSPKARRIEARFPDPAANPYLAFAALLMAGLDGIQNKIHPGDA ADKNLYDLPPEEAKEIPQVCGSLKEALEELDKGRAFLTKGGVFTDEFIDAYIELKSEE EIKVRTFVHPLEYDLYYSV" misc_feature 5766502..5767890 /gene="glnA" /locus_tag="PA5119" /note="glutamate--ammonia ligase; Region: glnA; PRK09469" /db_xref="CDD:181884" gene 5768041..5768445 /locus_tag="PA5120" /db_xref="GeneID:878800" CDS 5768041..5768445 /locus_tag="PA5120" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253807.1" /db_xref="GeneID:878800" /translation="MRHSLWLLLAAILSLPAQAGTECRDIHDRDLRRMCNALERGDSG DCGDIDSRDMRRYCGALLAPGQRYDCDDIRDGDTRRQCRAIVRGDRKRCDDIDSRDMR RQCRAVVSRAPWQCDGIDDRDMRRICRVILSR" gene complement(5768442..5770649) /locus_tag="PA5121" /db_xref="GeneID:878801" CDS complement(5768442..5770649) /locus_tag="PA5121" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253808.1" /db_xref="GeneID:878801" /translation="MPIIARFTLRSRVLAALLLCLCAALFYSPPGAAALPNPLAGSSS GGEKVSDAQLEQSLNQVIQTLENDRQRADLLKKLKQLRDVTKKGKESEGGVLGLIGDT LTSLEKQFQGANSPVALWGNQFQLARAELEERFPSWRDLPAMVFDFSVVILLWACLAS ALLWLSRRMRERFGLSAELPQHPKTRDLLLFSLRKLGPWLVAFLITLYLSVVLPDSLS KTLAMVMAYVLVCGTLFSALCVISLSLLSGPHRQRALDILRRQAFRPLWLIGSLAALG EVAHDPRLIAGLGEHTSICLSTLANASAALFTALFVMRFRRPIAHLIRNQPLERRLKR RSLHDLVQLVGSLWFVPVLVLVGISLFATFVSAGDSSSALRRALVCAVLAVVAMTVIG LIRRRSSRVGAGPRRSAPYIEQLQSFGYTLLHIFVVLFFIEVALRVWGMSLIRYAEGE GEQISMKVVSFGTTLLVAWLIWILTDTAIQHSLGLGGKSRPNTRALTMLPLIRNVLFA TIAVIALIVALANMGMNVTPLLAGAGVIGLAIGFGAQSLVADLITGLFIIIEDSLSID DYVDVGGHLGTVEGLTIRTVRLRDLDGVVHTIPFSEIKSIKNYSRQFGYAMFRWPVPA SMPIDDAVALVREVAMELRSDPAVYRNLWSPMELQGVESFDNGQAILRFRFKTAPIKQ WEVQRAFNLRLRRRLDQAGLELSMPRLNVQLSRAPKAKSAEPDEQGTPADGGI" misc_feature complement(5768499..5769338) /locus_tag="PA5121" /note="Small-conductance mechanosensitive channel [Cell wall/membrane/envelope biogenesis]; Region: MscS; COG0668" /db_xref="CDD:440432" gene 5770937..5771458 /locus_tag="PA5122" /db_xref="GeneID:878802" CDS 5770937..5771458 /locus_tag="PA5122" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253809.1" /db_xref="GeneID:878802" /translation="MRLITSCLLLAAALPAMAQIYQYTDANGNKVFTNQPPDGVQAQT VELQPTNTVGIDTPEKSSAGNAPAADSEAAAYEILALSDLPTEEALRANNGTFNVSVS IRPALHSGHQLQLVLDGKPYGTPSGGTRFTLHEIDRGDHSLAVQVLNGERVLQSSPPV TFTVQRVHLGKKR" misc_feature <5770991..5771095 /locus_tag="PA5122" /note="Domain of unknown function (DUF4124); Region: DUF4124; pfam13511" /db_xref="CDD:433269" gene 5771455..5772027 /locus_tag="PA5123" /db_xref="GeneID:877970" CDS 5771455..5772027 /locus_tag="PA5123" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253810.1" /db_xref="GeneID:877970" /translation="MIPRILGALLLCLACAAQAGVYTYIDAEGNRVYTDQPPSGRKAQ RVELAPGNSVAPPGIRYRPPAAPLEVKPPAYQLLRILFPEPDATLRANSGDVIVTVTS EPALLPGHRYRLLLDGKPAGVPGRSPVFPLKNLDRGTHQVAVEIIDGDGMTVESTPSQ PFHLHRVSIAGQPLPEVDTPLVSAIEPSER" misc_feature <5771512..5771625 /locus_tag="PA5123" /note="Domain of unknown function (DUF4124); Region: DUF4124; pfam13511" /db_xref="CDD:433269" gene 5772298..5773374 /gene="ntrB" /locus_tag="PA5124" /db_xref="GeneID:877971" CDS 5772298..5773374 /gene="ntrB" /locus_tag="PA5124" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="two-component sensor NtrB" /protein_id="NP_253811.1" /db_xref="GeneID:877971" /translation="MPTDTLHRLLLDNLTTAVILLNGELRLEYMNPAAEMLLAVSGQR SHGQFISELFTESPEALNSLRQAVEQAHPFTKREATLTSITGVSITVDYAVTPILNRN ETLLLLEVHPRDRLMRITREEAQLSKQETTKLLVRGLAHEIKNPLGGIRGAAQLLSRE LPEESLKDYTNVIIEEADRLRNLVDRMLGSNKLPNLAPTNIHEVLERVSSLVEAESQG SITLVRDYDPSIPDLLLDREQMIQAVLNMVRNAMQAIAGQNDLRLGRITLRSRTLRQF TIGHTRHRLVCKVEIIDNGPGIPAELQETIFYPMVSGRPDGTGLGLAIAQNIISQHQG LIECESHPGHTVFSLFLPLEQGVH" misc_feature 5772313..5773365 /gene="ntrB" /locus_tag="PA5124" /note="Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms]; Region: NtrB; COG3852" /db_xref="CDD:443061" gene 5773377..5774807 /gene="ntrC" /locus_tag="PA5125" /db_xref="GeneID:877699" CDS 5773377..5774807 /gene="ntrC" /locus_tag="PA5125" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="two-component response regulator NtrC" /protein_id="NP_253812.1" /db_xref="GeneID:877699" /translation="MSRSETVWIVDDDRSIRWVLEKALQQEGMTTVSFDSADSVIGRL GRQQPDVIISDIRMPGASGLDLLAQIRELHPRLPVIIMTAHSDLDSAVASYQGGAFEY LPKPFDVDEAVSLVKRANQHAQEQQGLELPANQARTPEIIGEAPAMQEVFRAIGRLSH SNITVLINGESGTGKELVAHALHRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAF TGAAAQRRGRFEQADGGTLFLDEIGDMPADTQTRLLRVLADGEFYRVGGHTPVKVDVR IIAATHQNLESLVRDGKFREDLFHRLNVIRIHIPRLADRREDIPALARHFLSRAAQEL AVEPKLLKAETEEYLKNLGWPGNVRQLENTCRWITVMASGREVHIDDLPPELLTQPQD SAPAANWEQALRQWADQALGRGQSNLLDSAVPAFERIMIETALKHTAGRRRDAAVLLG WGRNTLTRKIKELGMNVDGADDEGDD" misc_feature 5773395..5774765 /gene="ntrC" /locus_tag="PA5125" /note="nitrogen regulation protein NR(I); Region: ntrC; TIGR01818" /db_xref="CDD:273818" gene complement(5775620..5776087) /locus_tag="PA5126" /db_xref="GeneID:877700" CDS complement(5775620..5776087) /locus_tag="PA5126" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253813.1" /db_xref="GeneID:877700" /translation="MQGSGADNGRHSTSAIDDLRRQRWKVWGALVLAGLLFGLMLGRL FGPASLPTSAPQLLAVGESEQGLVLRFDRQAAVTAARVEGALTLRIVARGAAQQGDGR WLGQPLRWRLREEGKALLLSLVSTHPLQGRWQWSEDGEGWRLVVELQERDGRE" gene 5776086..5776547 /locus_tag="PA5127" /db_xref="GeneID:878568" CDS 5776086..5776547 /locus_tag="PA5127" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="rRNA methylase" /protein_id="NP_253814.1" /db_xref="GeneID:878568" /translation="MFHVILFQPEIPPNTGNIIRLCANAGCSLHLIEPLGFELDDKRL RRAGLDYHEYASVRRYPYLQSCLEALGQPRLFAFTTKGSRAFHEVAYQRGDAFLFGPE SRGLPEDVRNALPTDRRLRLPMREGCRSLNLSNTVAVTVYEAWRQLGFAMD" misc_feature 5776086..5776538 /locus_tag="PA5127" /note="tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]; Region: TrmL; COG0219" /db_xref="CDD:439989" gene complement(5776606..5777097) /gene="secB" /locus_tag="PA5128" /db_xref="GeneID:878569" CDS complement(5776606..5777097) /gene="secB" /locus_tag="PA5128" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecB" /protein_id="NP_253815.1" /db_xref="GeneID:878569" /translation="MTEQATNGAADEQQPQFSLQRIYLRDLSFESPKSPEIFRQEWNP SISLDLNTRQKQLDGDFYEVVLTVSVTVKNGEDTTAFIAEVQQAGIFLIKNLDPSSMS HTLGAFCPNILFPYAREALDNLVVRGSFPALMLSPVNFDALYAQEIARMQASGEIPTP SVQ" misc_feature complement(5776615..5777097) /gene="secB" /locus_tag="PA5128" /note="preprotein translocase subunit SecB; Validated; Region: PRK05751" /db_xref="CDD:180234" misc_feature complement(order(5776846..5776848,5776852..5776854, 5777008..5777010,5777020..5777022)) /gene="secB" /locus_tag="PA5128" /note="SecA binding site [active]" /db_xref="CDD:238312" misc_feature complement(order(5776837..5776839,5776843..5776845, 5776849..5776851,5776855..5776857)) /gene="secB" /locus_tag="PA5128" /note="Preprotein binding site [active]" /db_xref="CDD:238312" gene complement(5777134..5777388) /gene="grx" /locus_tag="PA5129" /db_xref="GeneID:877828" CDS complement(5777134..5777388) /gene="grx" /locus_tag="PA5129" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutaredoxin" /protein_id="NP_253816.1" /db_xref="GeneID:877828" /translation="MPPVVIYTTAWCPYCIRAKQLLQRKGVDFQEIACDGKPELRAEL ARKAGSTTVPQIWIGETHVGGCDDLHALERAGKLDALLSA" misc_feature complement(5777143..5777379) /gene="grx" /locus_tag="PA5129" /note="Glutaredoxin, GrxC family; Region: GRX_bact; TIGR02181" /db_xref="CDD:274017" misc_feature complement(order(5777230..5777235,5777239..5777241, 5777347..5777355,5777362..5777364)) /gene="grx" /locus_tag="PA5129" /note="GSH binding site [chemical binding]; other site" /db_xref="CDD:239510" misc_feature complement(order(5777344..5777346,5777353..5777355)) /gene="grx" /locus_tag="PA5129" /note="catalytic residues [active]" /db_xref="CDD:239510" gene complement(5777390..5777809) /locus_tag="PA5130" /db_xref="GeneID:877829" CDS complement(5777390..5777809) /locus_tag="PA5130" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253817.1" /db_xref="GeneID:877829" /translation="MQFVSRLIEFATNHYLLVAALLVLLVLLLLHELRKGGKSLSTRE LTALVNADQAVVLDIRPAKEFASGHIVDALNIPADKLNSRMTELEKYKGKTIILVDAM GQHSGTWGGVLKKAGFNAAKLSGGIGSWRGDNLPLVK" misc_feature complement(5777393..5777698) /locus_tag="PA5130" /note="Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]; Region: PspE; COG0607" /db_xref="CDD:440372" gene 5778134..5779681 /gene="pgm" /locus_tag="PA5131" /db_xref="GeneID:878134" CDS 5778134..5779681 /gene="pgm" /locus_tag="PA5131" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2,3-bisphosphoglycerate-independent phosphoglycerate mutase" /protein_id="NP_253818.1" /db_xref="GeneID:878134" /translation="MTATPKPLVLIILDGFGHSESPDYNAIYAAKKPVWDRLLATQPH GLISGSGMDVGLPDGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPVIAGA VDKAVAADKAVHILGLLSPGGVHSHEDHLVAMAQMAARRGAGKIYLHAFLDGRDTPPK SAQPSLERLDATFAGLGKGRIASIIGRYFAMDRDNRWDRVQAAYELIVDGKAEFTADS SVAALEAAYARGESDEFVKATAVVPAGAEAVRVEDGDAVIFMNFRADRARELSRAFVE PAFNEFPRERAPQLAGFVMLTQYAASIPAPCAFPPEPLTNVLGEYLAKHGKTQLRIAE TEKYAHVTFFFSGGREEPYEGEERILIPSPKVATYDLQPEMSAPEVTDRIVEAIEQQR YDVIVVNYANGDMVGHTGVFEAAVKAVECLDTCMGRIVEALDKVGGEALITADHGNVE QMEDESTGQAHTAHTCEPVPFVYVGKRKLSIREGGVLADVAPTMLTLMGLEQPAEMTG RSIVTLG" misc_feature 5778143..5779672 /gene="pgm" /locus_tag="PA5131" /note="Phosphoglycerate mutase (BPG-independent), AlkP superfamily [Carbohydrate transport and metabolism]; Region: GpmI; COG0696" /db_xref="CDD:440460" gene 5779995..5780813 /locus_tag="PA5132" /db_xref="GeneID:878135" CDS 5779995..5780813 /locus_tag="PA5132" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253819.1" /db_xref="GeneID:878135" /translation="MWFLLATSLLALSFQRLLALVLLLATCCLAFYDGVLAPPAVAAL AALGVLALLRRRLAARRAWALGLELLLVAGAVGLFLHLLPGFANPSILDKAVVGPQSL PFTMYFNFDKALVPFLLLACLPSLFRDEARAPGRPWHWLLLVAAVPALLLLAVGVGLL RPELHAPAWLWQFILANLFFVSLAEEALFRGYLQQRLGQWLGPWPALALASALFGLAH FAGGPLLMLFAGLAGLIYGLAWLWSGRLWVATLFHFGLNLTHLLLFTYPLYRPA" misc_feature 5780496..5780786 /locus_tag="PA5132" /note="Membrane protease YdiL, CAAX protease family [Posttranslational modification, protein turnover, chaperones]; Region: YdiL; COG1266" /db_xref="CDD:440877" gene 5780963..5782249 /locus_tag="PA5133" /db_xref="GeneID:878609" CDS 5780963..5782249 /locus_tag="PA5133" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253820.1" /db_xref="GeneID:878609" /translation="MLRLLPLLLSLACLAPAFADERADTQRQLEQTQKDIGELKKLLD GIQQEKSGVQKQLKSTETEMGDLEKQIKALQDELDKSEAELKRLDGEKKKLQDARIEQ QRLLAIQARAAYQSGREEYLKLLLNQEHPEKFSRTLTYYDYINKARLEQLASFNETLR QLANVEQDISAQKAEQLSKQGELDSRREALAATRKERQQALAKLNSDYRERDQKLKSR QQDQAELAKVLRTIEETLARQAREAAAAAERERQRALAAERERARQQQAAPGRVTSPP REPAPGPLVSSTGAVYGGAFGSARGKLPWPVNGRVVARFGSQRGDDPRAKWDGVLISA SAGSTVRAVHGGRVVFADWLRGAGLLVILDHGGGYLSLYGHNQSLLKDAGDTVKAGDP IATVGTSGGQSSPAVYFAIRHQGRPADPTTWCRAQG" misc_feature 5781017..5782243 /locus_tag="PA5133" /note="Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning]; Region: EnvC; COG4942" /db_xref="CDD:443969" gene 5782278..5783588 /locus_tag="PA5134" /db_xref="GeneID:878610" CDS 5782278..5783588 /locus_tag="PA5134" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="carboxyl-terminal protease" /protein_id="NP_253821.1" /db_xref="GeneID:878610" /translation="MLHCFRPTTLALALLLGAGAAQAADAPADAAPLANGSSAPLPLD ELRTFAEVLDRVKAAYVEPVDDKTLLENAIKGMLSNLDPHSAYLGPEDFAELQESTSG EFGGLGIEVGSEDGFIKVVSPIDDTPAARAGIQPGDLIVQIDGKPTKGQSMTEAVDSM RGKAGSPITLTIVRDGGRPFDVELKRAIIKVKSVKSQVLEPGYAYLRITQFQVNTGEE VVKALNQLRKDNKGRLKGLVLDLRNNPGGVLQSAVEVADAFLTKGLIVYTKGRIANSE LRFSADPADPSDKVPLVVLINGGSASAAEIVAGALQDQKRAILMGTDSFGKGSVQTVL PLNNDRALKLTTALYYTPNGRSIQAQGIVPDIEVGRAKVTQERSSFEGFKEADLQGHL ANGNGGADRPTGKRAAPSERPQDSDYQLSQALSLLKGLSVTRGN" misc_feature 5782416..5783381 /locus_tag="PA5134" /note="C-terminal processing protease CtpA/Prc, contains a PDZ domain [Posttranslational modification, protein turnover, chaperones]; Region: CtpA; COG0793" /db_xref="CDD:440556" gene 5783588..5784361 /locus_tag="PA5135" /db_xref="GeneID:878611" CDS 5783588..5784361 /locus_tag="PA5135" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253822.1" /db_xref="GeneID:878611" /translation="MSAFRVALLGLCLLFNQAQARQDPVPYQRPPLLTVVIDDLGQNL ARDRRVLDLPPGVTLAIIPETPHAAELAREAHQRGRTVILHMPMDPAGGPYAWRPELT QEERARRLDAALAKVPFVQGLNNHEGSRMTAVRPAMAWLAEELQRRGLYLVDSRTSAA TVAASEAQRIGLASVSRDVFLDNEATPEAVSAQLQAGVALARKQGSALLIGHPHKATL DVLARELPKLRAQGIELVPPQMLIGERGNRNVNPRQAPH" misc_feature <5783657..5784313 /locus_tag="PA5135" /note="Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family [Carbohydrate transport and metabolism]; Region: YibQ; COG2861" /db_xref="CDD:442108" gene 5784430..5785911 /locus_tag="PA5136" /db_xref="GeneID:878021" CDS 5784430..5785911 /locus_tag="PA5136" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253823.1" /db_xref="GeneID:878021" /translation="MARPSPPMPLLAAALLVAGAIPLGFIWILTSAKFEIGGASPGES TVGKVENIDQRAMEQFCTGVRATPAGTWLVGRREVGRDEQALPEGVIDLDLVAAAQPR EEESEPHLFNFLNGMLLSGGDPETTYVSRLGADGVFHEVARLGETACLEVTPDGSSVF LLTGLRRPGKDNGQREQTVVLRSDDQGKSWRRLEEGFMAEANRLGWALAPRFHGKDEV WVWGDFEYGGADGGREPGQPSGLFYSPDRGASVESIATSAPLLVDLAYARELAPNGVS WGDYNGKHGQIKAHVAQLDAERAAIWVSQTFRYGPPEGRYLTSSVLVTTQAELRREGG RWQMGAIRRTDGVAVERLEQNMDGRVIAVLDHPDESRSLIAELDREALEWKITGKLPS PFWPLPSSSGLREFYMGRNVLLANTMNHYEVPLWLYPDEEPASVSANAVYYSDDWGSS WRRLDIAGYLGVLGFDEAHDRVFWARGNWYDSRDLGVQAYDLN" misc_feature 5784892..>5785203 /locus_tag="PA5136" /note="Sortilin, neurotensin receptor 3; Region: Sortilin-Vps10; pfam15902" /db_xref="CDD:464929" gene complement(5785948..5786703) /locus_tag="PA5137" /db_xref="GeneID:878022" CDS complement(5785948..5786703) /locus_tag="PA5137" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253824.1" /db_xref="GeneID:878022" /translation="MLKVLIQTLILGVLLGASAARAELPADYKVVLLTENFPPFNMAV DDKNFARDDGIDGISADIVREMFRRAGIGYSLSLRFPWDRLYRLTLDKPGYGLFSMTY TPERVPQFKWVGPLADTSWVLLAPAGSKIAVKNLKDAARYKLGAYKNDAVSQHLEAQG IPVINALRDQENVKKLTGGQIDLWATTDPVGRYLAKQEGVSGLQTVLRFNEAKLYLAL NKDTPDEVVERLQKALEQMRQEGFVDEAVANYL" misc_feature complement(5785951..5786616) /locus_tag="PA5137" /note="ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:440596" gene complement(5786853..5787605) /locus_tag="PA5138" /db_xref="GeneID:878478" CDS complement(5786853..5787605) /locus_tag="PA5138" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253825.1" /db_xref="GeneID:878478" /translation="MQRSLLFALLATLLLVGGARAETDPDYSMVLLTENFPPYNMAIN GKNFAQEDNIDGIAVDIVREMFKRAGIKYSLTLRFPWDRIYKLALEKPGYGVFVTARL AEREDKFKWVGPIGPDDWVLLAKGDSPITLGSLDEAKKYRIGAYKGDAIAEFLGKNGF EADLALRDQENAQKLVKGQIDLWASGDPAGRYLAKQEGVTGLKTVLRFNSDQLYLALN RETPDEVVQKLQAALDGMRKEGFVEDILNSYL" misc_feature complement(5786856..5787518) /locus_tag="PA5138" /note="ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:440596" protein_bind 5787669..5787681 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA5138" /bound_moiety="AmrZ" gene complement(5787696..5788442) /locus_tag="PA5139" /db_xref="GeneID:878479" CDS complement(5787696..5788442) /locus_tag="PA5139" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253826.1" /db_xref="GeneID:878479" /translation="MSIFRLALGCVGSLALLCASALARAETLVLLTENLVPFNMAVNG GNYAKDDGISGISTDTVRAACERAQIECQLILRFPWDRVYQQALSEPGYGVFSTARTP EREDKFKWVGPLAVNDWVLMARGDSSIHLNSLEDAARYRIGGYKNDAISQHLVDRGLQ VQLALRDNENVDKLASGQIDLWVTADPSGRYVAQREGLKEVKVVQRFHTAELFLALNK DTPDELVQKLQTAVDALRSEGLLKQIRERY" misc_feature complement(5787699..5788358) /locus_tag="PA5139" /note="ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:440596" gene complement(5788614..5789384) /gene="hisF1" /locus_tag="PA5140" /db_xref="GeneID:878541" CDS complement(5788614..5789384) /gene="hisF1" /locus_tag="PA5140" /EC_number="4.1.3.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="imidazole glycerol phosphate synthase subunit HisF" /protein_id="NP_253827.1" /db_xref="GeneID:878541" /translation="MALAKRIIPCLDVDNGRVVKGVKFENIRDAGDPVEIARRYDEQG ADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRSVQDIRNLLNAGADKVS INTAAVFNPEFVGEAADRFGSQCIVVAIDAKKVSAPGEAPRWEIFTHGGRKPTGLDAV LWAKKMEDLGAGEILLTSMDQDGVKSGYDLGVTRAISEAVNVPVIASGGVGNLEHLAA GILEGKADAVLAASIFHFGEYTVPEAKAYLASRGIVVR" misc_feature complement(5788617..5789378) /gene="hisF1" /locus_tag="PA5140" /note="Imidazole glycerol phosphate synthase subunit HisF [Amino acid transport and metabolism]; Region: HisF; COG0107" /db_xref="CDD:439877" gene complement(5789395..5790132) /gene="hisA" /locus_tag="PA5141" /db_xref="GeneID:878542" CDS complement(5789395..5790132) /gene="hisA" /locus_tag="PA5141" /EC_number="5.3.1.16" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase" /protein_id="NP_253828.1" /db_xref="GeneID:878542" /translation="MLIIPAIDLKDGACVRLRQGLMEDATVFSDDPVAMAAKWVDGGC RRLHLVDLNGAFEGKPVNGEVVTAIARRYPDLPIQIGGGIRSLETIEHYVRAGVSYVI IGTKAVKQPEFVGEACRAFPGKVIVGLDAKDGFVATDGWAEVSEVQVIDLARRFEADG VSAIVYTDISKDGMMQGCNVEATAALANATRIPVIASGGIHNLGDIQKLLDARTPGII GAITGRAIYEGTLDVAEAQALCDNFKA" misc_feature complement(5789425..5790132) /gene="hisA" /locus_tag="PA5141" /note="1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated; Region: PRK00748" /db_xref="CDD:179108" misc_feature complement(order(5789743..5789745,5789989..5789991, 5790109..5790111)) /gene="hisA" /locus_tag="PA5141" /note="catalytic residues [active]" /db_xref="CDD:240083" gene complement(5790445..5791086) /gene="hisH1" /locus_tag="PA5142" /db_xref="GeneID:878788" CDS complement(5790445..5791086) /gene="hisH1" /locus_tag="PA5142" /EC_number="2.4.2.-" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="imidazole glycerol phosphate synthase subunit HisH" /protein_id="NP_253829.1" /db_xref="GeneID:878788" /translation="MMQTVAVIDYGMGNLHSVAKALEHVGAGRVLVSSDAAVIREADR VVFPGVGAIRDCMAEIRRLGFDALVREVSQDRPFLGICVGMQALLERSEENDGVDCIG LFPGQVRFFGKDLHEAGEHLKVPHMGWNQVSQAVEHPLWHEIPDQARFYFVHSYYIEA GNPRQVVGHGHYGVDFAAALAEGSRFAVQFHPEKSHTHGLQLLQNFVAWDGRW" misc_feature complement(5790454..5791083) /gene="hisH1" /locus_tag="PA5142" /note="imidazole glycerol phosphate synthase subunit HisH; Provisional; Region: hisH; PRK13146" /db_xref="CDD:237290" misc_feature complement(order(5790508..5790510,5790514..5790516, 5790835..5790849,5790934..5790957)) /gene="hisH1" /locus_tag="PA5142" /note="putative active site [active]" /db_xref="CDD:153219" misc_feature complement(5790934..5790957) /gene="hisH1" /locus_tag="PA5142" /note="oxyanion strand [active]" /db_xref="CDD:153219" misc_feature complement(order(5790508..5790510,5790514..5790516, 5790841..5790843)) /gene="hisH1" /locus_tag="PA5142" /note="catalytic triad [active]" /db_xref="CDD:153219" gene complement(5791083..5791676) /gene="hisB" /locus_tag="PA5143" /db_xref="GeneID:878789" CDS complement(5791083..5791676) /gene="hisB" /locus_tag="PA5143" /EC_number="4.2.1.19" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="imidazoleglycerol-phosphate dehydratase" /protein_id="NP_253830.1" /db_xref="GeneID:878789" /translation="MAERKASVARDTLETQIKVSIDLDGTGKARFDTGVPFLDHMMDQ IARHGLIDLDIECKGDLHIDDHHTVEDIGITLGQAFAKAIGDKKGIRRYGHAYVPLDE ALSRVVIDFSGRPGLQMHVPFTRASVGGFDVDLFMEFFQGFVNHAQVTLHIDNLRGHN THHQIETVFKAFGRALRMAIELDERMAGQMPSTKGCL" misc_feature complement(5791086..5791673) /gene="hisB" /locus_tag="PA5143" /note="imidazoleglycerol-phosphate dehydratase HisB; Region: hisB; PRK00951" /db_xref="CDD:234873" misc_feature complement(order(5791179..5791181,5791188..5791193, 5791263..5791265,5791335..5791337,5791374..5791379, 5791401..5791403,5791467..5791469,5791476..5791481, 5791533..5791538,5791545..5791547,5791557..5791559, 5791635..5791637)) /gene="hisB" /locus_tag="PA5143" /note="putative active site pocket [active]" /db_xref="CDD:153419" misc_feature complement(order(5791188..5791202,5791263..5791268, 5791275..5791277,5791281..5791283,5791290..5791304, 5791476..5791481,5791485..5791493,5791557..5791559, 5791566..5791571)) /gene="hisB" /locus_tag="PA5143" /note="4-fold oligomerization interface [polypeptide binding]; other site" /db_xref="CDD:153419" misc_feature complement(order(5791179..5791181,5791188..5791193, 5791263..5791265,5791467..5791469,5791476..5791481, 5791557..5791559)) /gene="hisB" /locus_tag="PA5143" /note="metal binding residues [ion binding]; metal-binding site" /db_xref="CDD:153419" misc_feature complement(order(5791128..5791130,5791146..5791148, 5791155..5791157,5791209..5791211,5791215..5791217, 5791221..5791223,5791227..5791229,5791329..5791331, 5791335..5791337,5791347..5791355,5791365..5791370, 5791374..5791382,5791386..5791394,5791398..5791400, 5791404..5791406)) /gene="hisB" /locus_tag="PA5143" /note="3-fold/trimer interface [polypeptide binding]; other site" /db_xref="CDD:153419" gene 5791837..5792235 /locus_tag="PA5144" /db_xref="GeneID:878777" CDS 5791837..5792235 /locus_tag="PA5144" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253831.1" /db_xref="GeneID:878777" /translation="MPVIVETLAQPSAQDRLDLAKIYADAPDWLFAPHADGAALVAAG LAAGELIAGRFNDRLLGAALLRRGDDAWQLSHLCVRGITRGRGVGRRLLDEARRLAAE AGKPLRLVAPDGHLEARALAARHGLPLDSL" misc_feature 5791840..5792223 /locus_tag="PA5144" /note="NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, from bacterial antibiotic resistance to circadian rhythms in mammals. Members...; Region: N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate; cl17182" /db_xref="CDD:473072" misc_feature order(5792065..5792073,5792101..5792106) /locus_tag="PA5144" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" gene 5792505..5793611 /locus_tag="PA5145" /db_xref="GeneID:878778" CDS 5792505..5793611 /locus_tag="PA5145" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253832.1" /db_xref="GeneID:878778" /translation="MNDVDVLVVGAGALGLACAARLAEAGHGVLVAERERLVGSHTSS RNSEVIHAGLYYPPGSLKADLCLEGRERLYAWCARHGVGHRRIGKLLVAVEENERERL QALAANARACGVDDLMPLDGTTLRALEPQVRGVAALLSPSTGIIDSHAYLQSLQAVAE RHGAQLALDTRVDRLERHAGGWRAEGQSVGEAFRLRAGWVVNAGGLFAQALAQRTEGL DPRLVPALHLCQGRYFSYSGRSPFRHLVYPMPEARTAGLGIHATLDLGGQLRFGPDVN YVDNLDYRVDESLRPAFAQVISRYFPGIDPRRLAAGYAGIRPKLGGPGEPAADFIIQT PAEHGLPGLVNLFGIESPGLTASLALAERVARAL" misc_feature 5792589..5793608 /locus_tag="PA5145" /note="L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; Region: LhgO; COG0579" /db_xref="CDD:440344" gene 5793705..5795957 /locus_tag="PA5146" /db_xref="GeneID:878779" CDS 5793705..5795957 /locus_tag="PA5146" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253833.1" /db_xref="GeneID:878779" /translation="MKAFGKVLGLFFLGLLLLVVALGFALTHLFDPNDYKDEIRQIAR DKANLELDLKGDIGWSLFPWLGLELHDTSIASAATPTKPFADLQMLGLSVRVLPLLRK DVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPAAPSETPPAADGKGAQAQAP EQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIELSTGAIREGSSIPL KLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGEPLQGKTATFSAQ GQLLLDQSAQIAEWNGLKLSVNQLRALGELKARELDKDTKFSGGLSIAPMNLREFLAG IGVTLPAMADANTLGKFELNTRLAGSRNSLNLEDLKLGLDDTAFSGRFGIADFARQSL RAQLKGDKLDLDRYLPAKAKQAQDAASATRKAEVDATVASAAQGNTPLPEKPTRQAWS DAPLLPIATLRKLDLDVALNFGRLTVEKLPIDDASLKLRGQGGVISLDDMRGGLYNGR FNAKANLDVRQDSAVLTATKHIANVPVERLLEAQGKKPPVKGLLDLDADIRTSGNSEK SWIDHLNGNARFSLINGVLPDANLEQQLCQGIATLNRKALAGTHGGKDTPFRELKGSL NFTNGVASNPDLKVAIPGLAVSGHGDIDLRVLGMDYRIGVEIQGDKSDMPDPACQVNQ RYAGIEWPLLCRGPLELGAKACRLDKEGMGKVAAKLAGNRLNEKLEEKLGDKVSPELK DALKGLFNRK" misc_feature 5793777..5795612 /locus_tag="PA5146" /note="AsmA family; Region: AsmA; pfam05170" /db_xref="CDD:428346" gene 5795954..5797021 /gene="mutY" /locus_tag="PA5147" /db_xref="GeneID:878753" CDS 5795954..5797021 /gene="mutY" /locus_tag="PA5147" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="A/G-specific adenine glycosylase" /protein_id="NP_253834.1" /db_xref="GeneID:878753" /translation="MTPEGFNGAVLDWYDRHGRKDLPWQQGITPYRVWVSEIMLQQTQ VSTVLGYFDRFMAALPDVEALAAAAEDEVLHLWTGLGYYSRARNLHKTAQIVVERHAG EFPRDVEQLAELPGIGRSTAGAIASLSMGLRAPILDGNVKRVLARYLAQDGYPGEPKV ARALWEAAERFTPHARVNHYTQAMMDLGATLCTRSKPSCLLCPLVSGCRAHLLGREAD YPQPKPRKALPQKRTLMPILANRDGAILLYRRPSSGLWGGLWSLPELDDLDGLEPLAA RHSLALGERRELSGLTHTFSHFQLAIEPWLVAVEGAPRAVAEGDWLWYNLATPPRLGL AAPVKKLLKRAEQELGRGTAA" misc_feature 5795954..5796994 /gene="mutY" /locus_tag="PA5147" /note="Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs [Replication, recombination and repair]; Region: MutY; COG1194" /db_xref="CDD:440807" gene 5797065..5797337 /locus_tag="PA5148" /db_xref="GeneID:878754" CDS 5797065..5797337 /locus_tag="PA5148" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253835.1" /db_xref="GeneID:878754" /translation="MSRTVMCRKYHEELPGLDRPPYPGAKGEDIYNNVSRKAWDEWQK HQTMLINERRLNMMNAEDRKFLQQEMDKFLSGEDYAKADGYVPPSA" misc_feature 5797065..5797334 /locus_tag="PA5148" /note="Fe-S cluster biosynthesis and repair protein YggX [Inorganic ion transport and metabolism, Posttranslational modification, protein turnover, chaperones]; Region: YggX; COG2924" /db_xref="CDD:442168" gene 5797365..5798447 /locus_tag="PA5149" /db_xref="GeneID:878760" CDS 5797365..5798447 /locus_tag="PA5149" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253836.1" /db_xref="GeneID:878760" /translation="MTPSLSGLPPIRTALIGYGFAGKTFHAPLIRAVPALCLEHVVSR DPGRVHADLPEARVSADPDEAIEAADIDLVVIASPNATHASLAERALRAGKHVVVDKP FTVTLAEARRLADLARERPGQVLSVFQNRRFDSDFLAVEAALQAGSIGPVRYFESAIE RFRPQVRDRWREHDLPGSGLWFDLGPHLLDQALCLFGVPQRVHGHLRRLREGALTDDW FEVLLDYPHCQVALRASMLAANPAPRFNVHGDHGSLLKAGADIQEAQLLQGLHPGSAG WGRDPDLLQHIDGQGLRQSLVTPAGDQSRYYQALAAAIRGQSRNPVSAQQACALMALL ELARRSAEEGRSLPVELRDEERQAWN" misc_feature 5797395..5798411 /locus_tag="PA5149" /note="putative oxidoreductase; Provisional; Region: PRK11579" /db_xref="CDD:183212" gene 5798560..5798635 /locus_tag="PA5149.1" /db_xref="GeneID:3240229" tRNA 5798560..5798635 /locus_tag="PA5149.1" /product="tRNA-Phe" /db_xref="GeneID:3240229" gene complement(5798693..5799430) /locus_tag="PA5150" /db_xref="GeneID:879973" CDS complement(5798693..5799430) /locus_tag="PA5150" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_253837.1" /db_xref="GeneID:879973" /translation="MAERKTLLLTGASRGIGHATVKYFNAAGWRVFTASRQSWASECP WADGEENHIHLDLEDIPGVEASLELIREKLGDGRLHALVDNAGISPKGEGGERLGVLE TDYATWLRVFNVNLFSTALLARGLFAELKAAQGTVINVTSIAGSKVHPFAGVAYATSK AALSALTREMAHDFGPHGVRVNAIAPGEIDTSILSPGTEEIVERSIPLHRLGRPEEIA SLIYFLCTSGASYVNGAEIHVNGGQHV" misc_feature complement(5798696..5799424) /locus_tag="PA5150" /note="NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Lipid transport and metabolism]; Region: FabG; COG1028" /db_xref="CDD:440651" gene 5799589..5800278 /locus_tag="PA5151" /db_xref="GeneID:879974" CDS 5799589..5800278 /locus_tag="PA5151" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253838.1" /db_xref="GeneID:879974" /translation="MLKKSFNSLLTTWLAGLLVMLPLVLTLALLAWVVSLLNRFVGPS SLIGRGFAAIGQPLAGDSPLAYLLGTALLLVAIYLLGLGVQLGLKRPLANLFDLTLRR TPLIGNLYNLADRFVGLLDKKQDADIAAMSPVWCFFGGDGAAVLALMPNPEAVELDGR AHYAILVPTAPIPVGGGLLYVPVEWVKPAQIGMDTFTSIYVSMGITPPPPLAAAKVLA EPRAEQPPAAP" misc_feature 5799598..5800245 /locus_tag="PA5151" /note="Uncharacterized membrane protein [Function unknown]; Region: COG2928" /db_xref="CDD:442172" protein_bind complement(5800369..5800410) /experiment="Beta-gal reporter assay [PMID: 15175299]" /experiment="DNA-array expression analysis [PMID: 15175299]" /experiment="EMSA [PMID: 15175299]" /note="'Transcription factor binding site for NP_249584.; Evidence of regulation for: PA5152, PA5153, PA5154, PA5155'" /bound_moiety="ArgR" gene 5800527..5801300 /locus_tag="PA5152" /db_xref="GeneID:879975" CDS 5800527..5801300 /locus_tag="PA5152" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_253839.1" /db_xref="GeneID:879975" /translation="MAEATPALEIRNLHKRYGDLEVLKGISLTARDGDVISILGSSGS GKSTFLRCINLLENPHQGQILVSGEELRLKKSKNGDLVAADSQQINRLRSELGFVFQN FNLWPHMSILDNVIEAPRRVLGKSKAEAIEIAEGLLAKVGIADKRHSYPAQLSGGQQQ RAAIARTLAMQPKVILFDEPTSALDPEMVQEVLNVIRALAEEGRTMLLVTHEMSFARQ VSSEVVFLHQGLVEEQGTPQQVFENPQSARCKQFMSSHR" misc_feature 5800530..5801297 /locus_tag="PA5152" /note="ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]; Region: HisP; COG4598" /db_xref="CDD:443652" gene 5801315..5802067 /locus_tag="PA5153" /db_xref="GeneID:879969" /db_xref="PseudoCap:PA5153" CDS 5801315..5802067 /locus_tag="PA5153" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="amino acid ABC transporter substrate-binding protein" /protein_id="NP_253840.1" /db_xref="GeneID:879969" /db_xref="PseudoCap:PA5153" /translation="MKNYKKILLAAAATLAFALDASAADKLRIGTEGAYPPFNGIDAS GQAVGFDLDIGKALCAKMKTECEVVTSDWDGIIPALNAKKFDFIVASMSITDERKQAV DFTDPYYTNKLQFVAPKSVDFKTDKDSLKGKVIGAQRATIAGTWLEDNMADVVTIKLY DTQENAYLDLSSGRLDGVLADKFVQYDWLKSDAGKEFEFKGEPVFDNDKIGIAVRKGD PLREKLNAALKEIVADGTYKKINDKYFPFSIY" misc_feature 5801384..5802049 /locus_tag="PA5153" /note="Substrate binding domain of ABC-type histidine/lysine/arginine/ornithine transporter-like; the type 2 periplasmic-binding protein fold; Region: PBP2_mlr5654_like; cd13702" /db_xref="CDD:270420" misc_feature order(5801408..5801410,5801417..5801419,5801531..5801533, 5801582..5801584,5801588..5801593,5801606..5801608, 5801726..5801728,5801735..5801743,5801855..5801857) /locus_tag="PA5153" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:270420" gene 5802129..5802824 /locus_tag="PA5154" /db_xref="GeneID:879970" CDS 5802129..5802824 /locus_tag="PA5154" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_253841.1" /db_xref="GeneID:879970" /translation="MILDLHGFGEQLLAGTWMTLKLSLAAVCVGLLLGLLGAIAKTSK YAALRFLGGTYTTIVRGVPETLWVLMIYFGTVSGLNALGDLFGKPDLALSPFAAGTLA LGLCFGAYATEVFRGALLSIPRGHREAGQALGLSPGRIFWRIVLPQIWRVALPGLGNL YLILLKDTALVSLITLDEIMRKAQVASNATKEPFTFYMTAAAIYLSLTVVIMVALHFL ERRAGRGFVRNEL" misc_feature 5802129..5802821 /locus_tag="PA5154" /note="ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; Region: ArtQ; COG4215" /db_xref="CDD:443361" gene 5802821..5803513 /locus_tag="PA5155" /db_xref="GeneID:879956" /db_xref="PseudoCap:PA5155" CDS 5802821..5803513 /locus_tag="PA5155" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="amino acid ABC transporter permease" /protein_id="NP_253842.1" /db_xref="GeneID:879956" /db_xref="PseudoCap:PA5155" /translation="MSEWELILKWMPKMLQGAALTLELLAIAVVAGLALALPLGIARA SRHWYVRAVPYAYIFFFRGTPLLLQLFIVYYGLAQFEEVRKSAFWPYLRDPYWCALLT MTLHTAAYIAEILRGAIHSVPVGEVEAARALGMSRRQALWHIILPRAVRIGLPAYSNE VILMLKASAVVYTVTLFDIMGMARTIIARTYESMLFFCLAGALYLVITIVLTRIFRLI ERWLRVDATQGR" misc_feature 5802827..5803486 /locus_tag="PA5155" /note="ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism]; Region: ArtM; COG4160" /db_xref="CDD:443325" protein_bind 5803346..5803358 /locus_tag="PA5155" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 5803582..5804802 /locus_tag="PA5156" /db_xref="GeneID:879957" CDS 5803582..5804802 /locus_tag="PA5156" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253843.2" /db_xref="GeneID:879957" /translation="MSETFPFLTGDALSQRFLALDAFLLEHQRLWRPRPFSEPTLAWE AEHAELASWLRGRSLEQADAEHNQPTRLAAPAPYPQLAAQATALGAVGELPLAERPQA PNRFNVDVPGRKWQQIGLFAGRLQFARPVVHWLDWCSGKGHLGRLLAHAGQPLTCLEH DPALVADGQRLSDRLGLSAHHLRQDVLAADCAERLLPGHTPVALHACGELHLRLLRLA SQAGCRQLAVAPCCYNRIPGPFYQPLSQTAGRSLLALSLDDLRLPLSETVTASQRVRR QRDQSMARRLGFDLLQRELRGINQYLSVPSLPVAWLERPYADYCRELAALKGLPEPAA RDWQALEAAGWKRLAMVRNLELVRALFRRPLELWLLLDRCLYLVEQGYSVRLGEFCPT SLSPRNLLILAERS" misc_feature <5803675..5804796 /locus_tag="PA5156" /note="Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]; Region: PksD; COG3321" /db_xref="CDD:442550" misc_feature 5803918..5804283 /locus_tag="PA5156" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases; cl17173" /db_xref="CDD:473071" gene 5805206..5805676 /locus_tag="PA5157" /db_xref="GeneID:880004" CDS 5805206..5805676 /locus_tag="PA5157" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253844.1" /db_xref="GeneID:880004" /translation="MGHYSASDFPFKGSIGQLIGVSAATKDRILEKHLAALDITAAQF KVLIFVGLNRANSPVELCRELSVDSGSMTRMLARLEKKGLLLRGRCPEDRRCLRLDLS EAGRKVQEQLPLIASAAMNELVACLSTEELQTLTHLLTKVLLHAGCPRASLQES" misc_feature 5805287..5805634 /locus_tag="PA5157" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" gene 5805680..5807158 /locus_tag="PA5158" /db_xref="GeneID:880005" CDS 5805680..5807158 /locus_tag="PA5158" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253845.1" /db_xref="GeneID:880005" /translation="MPFPLLHPWPQRLALASAILLAAGCVTSEGLEPNARLQPAGALQ AGRSLDGVALSPAAWPRQDWWTGLGDRQLDQLIGEALQGTPDLQIAEARARQAAATAQ AQDAARQPTLDAKASYSGIRAPTSVAPAPLGGRYSAIKYLSLGFNYDFDLWGGERAAW EAALGQANAARIDSQAARIGLSASIARAYSDLAHAFTVRDLAEEELKRSQRMTELSQK RMSAGLDSKVQLQQTQTQLATARQQLSAAEQDIASARIALAVLLGKGPDRGLELQRPQ PLNPASLSLPSVLPAELLGRRADIVAARWRVEAARRNIDSAKTEFYPNLNLGAMAGLA ALHTSDVLQAPSRFFQVAPAISLPIFDGGRRRANLAERDADYDLAVGQYNKTLVQALG EVSDDLGKLRSLEQQVIDQRQARDIARSNFDLAMRRYGEGVGSYLDALSVQQQLLVAE RQLASLESQQIDLSVQLVQALGGGFQPDSRSAALATAKAPAE" misc_feature 5805749..5807101 /locus_tag="PA5158" /note="efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; Region: outer_NodT; TIGR01845" /db_xref="CDD:273830" gene 5807173..5808357 /locus_tag="PA5159" /db_xref="GeneID:880006" CDS 5807173..5808357 /locus_tag="PA5159" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="multidrug resistance protein" /protein_id="NP_253846.1" /db_xref="GeneID:880006" /translation="MTTANSETPAGNPKRKRWLLILLAMIVLATLASVAWEFFYGRWH EDTDDAYINGNVVQITPQIVGTVVSIGADDGDLVRKGQELVRFDPSDADIALQRAEAN LAHTVRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQEELAHARD ALDSAKASLTSSEQQLNTNRALVDDTQITSHPDVKAAAAQLRQAYLDDARSTIVAPVT GYVAKRSVQVGQRVQPGNALMAVVPLDQIWIDANFKETQLKHMRIGQPVEIRSDLYGS DVRYSGTVDSLGVGTGSAFSLLPAQNATGNWIKIVQRVPVRIHIDPQELQKHPLRIGL SMDVKVDLHDQSGPALAQQPPREALFSTDVYQQQLASADKLIERLIEANLAEDHGKTA QR" misc_feature 5807212..5808321 /locus_tag="PA5159" /note="Cation efflux system protein CusB domain 1; Region: CusB_dom_1; cl46872" /db_xref="CDD:481212" gene 5808368..5809897 /locus_tag="PA5160" /db_xref="GeneID:879920" CDS 5808368..5809897 /locus_tag="PA5160" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="drug efflux transporter" /protein_id="NP_253847.1" /db_xref="GeneID:879920" /translation="MSESSSFSPPSLVMATIGLSLATFMQVLDTTIANVALPTISGNL GVSSEQGTWVITSFAVSNAIALPLTGWLARRVGEVRLFIAATLLFVLASFLCGIAQSM PSLVGFRALQGFVAGPLYPITQTLLISIYPPAKRGMALALLAMVTVVAPIAGPILGGW ITDDYSWPWIFFINVPVGLFAAFVVYQQLKARPVVIKKAPMDYVGLIALVVGVGALQI VLDKGNDLDWFESNFIVGGALIAAIALAFFIIWEFTDRHPIVNLRLFAHRNFAAGTLA LVLGYAAFFGINLLLPQWLQTQMGYTATWAGLAAAPIGILPVFLSPLVGRYANHFDLR MLAGLSFLAMAITCFMRANFTTEVDYQHIAIVQLIMGLGVAFFFMPILSILLSDLPPD QIADGSGLATFLRTLGGSFAASLTTWIWHRRATQHHAYLSENISLYDPATHETLAQLG GNTQANAALLDRMVQSQAYMMSTIDYFTMLGWLFLALLVIIWLARPPFGAKPGAAASG H" misc_feature 5808404..5809849 /locus_tag="PA5160" /note="drug resistance transporter, EmrB/QacA subfamily; Region: efflux_EmrB; TIGR00711" /db_xref="CDD:129794" gene 5809970..5810045 /locus_tag="PA5160.1" /db_xref="GeneID:3240237" tRNA 5809970..5810045 /locus_tag="PA5160.1" /product="tRNA-Thr" /db_xref="GeneID:3240237" protein_bind 5810146..5810165 /experiment="Beta-gal reporter assay [PMID: 22262098]" /experiment="Site directed mutagenesis [PMID: 22262098]" /note="'Transcription factor binding site for NP_252167.; Evidence of regulation for: PA5163, PA5162, PA5161, PA5164'" /bound_moiety="RhlR" gene 5810281..5811339 /gene="rmlB" /locus_tag="PA5161" /db_xref="GeneID:879982" CDS 5810281..5811339 /gene="rmlB" /locus_tag="PA5161" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="dTDP-D-glucose 4,6-dehydratase" /protein_id="NP_253848.1" /db_xref="GeneID:879982" /translation="MTILVTGSAGFIGANFVLDWLALHDEPVVSLDKLTYAGNRQNLA SLDGDARHTFVAGDIGDSQLVARLLAEHQPRAILNFAAESHVDRSIHGPEDFIQTNIV GTFRLLEEVRAYWGALEPEAKAAFRFLHVSTDEVYGSLAPSDPAFTENNRYEPNSPYS ASKAASDHLVRAYHHTYGLPVLTTNCSNNYGPYHFPEKLIPLVIHNALAGKPLPIYGD GQQIRDWLYVKDHCSAIRRVLEAGQLGETYNVGGWNEKANLDVVETLCAILDQEQPRA DGRSYREQITFVKDRPGHDRRYAIDATRLERELGWKPAETFETGIRKTVRWYLDNQDW VANVTSGAYREWVGKQYA" misc_feature 5810281..5811315 /gene="rmlB" /locus_tag="PA5161" /note="dTDP-D-glucose 4,6-dehydratase [Cell wall/membrane/envelope biogenesis]; Region: RfbB; COG1088" /db_xref="CDD:440705" gene 5811336..5812244 /gene="rmlD" /locus_tag="PA5162" /db_xref="GeneID:879983" CDS 5811336..5812244 /gene="rmlD" /locus_tag="PA5162" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="dTDP-4-dehydrorhamnose reductase" /protein_id="NP_253849.1" /db_xref="GeneID:879983" /translation="MNRILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLA RLVRAERPQFIVNAGAYTAVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTD YVFDGAGSVPFAEDAPTGPLSVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFA KTMLRLAGQRDELKVVADQFGAPTSAELIADVTAQALQRLCWDVELAARASGTYHLVA SGETSWHLYARFVIEQALERGWELQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQ VFGLVLPDWRYHAGRMIQELSEQGPL" misc_feature 5811342..5812223 /gene="rmlD" /locus_tag="PA5162" /note="dTDP-4-dehydrorhamnose reductase; Region: rmlD; TIGR01214" /db_xref="CDD:273505" gene 5812241..5813122 /gene="rmlA" /locus_tag="PA5163" /db_xref="GeneID:879990" CDS 5812241..5813122 /gene="rmlA" /locus_tag="PA5163" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate thymidylyltransferase" /protein_id="NP_253850.1" /db_xref="GeneID:879990" /translation="MKRKGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLSTLM LAGIREILIISTPQDTPRFQQLLGDGSNWGLDLQYAVQPSPDGLAQAFLIGESFIGND LSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHVLDPERYGVVEFDQGGKAISLE EKPLEPKSNYAVTGLYFYDQQVVDIARDLKPSPRGELEITDVNRAYLERGQLSVEIMG RGYAWLDTGTHDSLLEAGQFIATLENRQGLKVACPEEIAYRQKWIDAAQLEKLAAPLA KNGYGQYLKRLLTETVY" misc_feature 5812250..5813107 /gene="rmlA" /locus_tag="PA5163" /note="glucose-1-phosphate thymidylyltransferase, short form; Region: rmlA; TIGR01207" /db_xref="CDD:130274" misc_feature order(5812262..5812264,5812268..5812273,5812484..5812486, 5812493..5812504,5812568..5812570,5812676..5812678, 5812721..5812726,5812754..5812756,5812838..5812840) /gene="rmlA" /locus_tag="PA5163" /note="substrate binding site [active]" /db_xref="CDD:133019" misc_feature order(5812280..5812282,5812289..5812297,5812304..5812309, 5812319..5812327,5812331..5812342,5812349..5812351, 5812424..5812426,5812580..5812585,5812649..5812660, 5812670..5812675,5812907..5812915,5812925..5812930, 5812937..5812939,5812946..5812954,5812961..5812966) /gene="rmlA" /locus_tag="PA5163" /note="tetramer interface [active]" /db_xref="CDD:133019" gene 5813122..5813667 /gene="rmlC" /locus_tag="PA5164" /db_xref="GeneID:879991" CDS 5813122..5813667 /gene="rmlC" /locus_tag="PA5164" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="dTDP-4-dehydrorhamnose 3,5-epimerase" /protein_id="NP_253851.1" /db_xref="GeneID:879991" /translation="MKATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVS FVQDNHSRSARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERL SAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQD APLLSEKDRQGKAFADADCFP" misc_feature 5813125..5813655 /gene="rmlC" /locus_tag="PA5164" /note="dTDP-4-dehydrorhamnose 3,5-epimerase; Region: rmlC; TIGR01221" /db_xref="CDD:273510" misc_feature order(5813188..5813214,5813218..5813220,5813260..5813283, 5813290..5813292,5813296..5813298,5813347..5813349, 5813515..5813517,5813527..5813529,5813614..5813616) /gene="rmlC" /locus_tag="PA5164" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:380337" misc_feature order(5813266..5813268,5813272..5813274,5813305..5813307, 5813311..5813313,5813332..5813334,5813473..5813475, 5813512..5813514,5813623..5813625) /gene="rmlC" /locus_tag="PA5164" /note="active site" /db_xref="CDD:380337" gene 5813727..5815565 /locus_tag="PA5165" /db_xref="GeneID:879962" CDS 5813727..5815565 /locus_tag="PA5165" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_253852.1" /db_xref="GeneID:879962" /translation="MPRILAATAGSFVLKAYFHRWRSLVILALLLAPLLWPLQYFAER YYSEQLAEQNRQTLDLYVANLLGTLRRYEELPQILGGLPVLRQALQQPGDPLLQKIAN EALADIRRRTGADVIYLLQPDGTTQVASNWAQADSFVHRNFAFRPYYREAMQGRLARF FGLGTTSIKRGYYFASAVKEGSRIIGVLVVKVDLEHIERLWGNSPEQLLVIDNYGVVI LSSREDWRFHASRPLSAAERDEIHANIPYPVQDPKPLRLQQSAWLSQSRTLPETGWTV SIYAPRTLIERPVRSVLLIGGATLLALLLLLTLLTLSRRHYLDRIALEAEAKRQLEER VLERTRELENANAQLQQEVHEREQAQRELMRAQDEVVQAGKLTALGTMSASISHELNQ PLAAIRSYADNARVLLDHQRTEDARGNLEQISDLTTRMASIIAHLKAYARGARRAPEN VQLQPAIEDALSMVASRRRAMNVELLRDVPDAPLWVQAGETRLRQILGNLLTNALDAL AEKAPPRRLWVIASQDQHGVTLTLRDNGPGFSEDALAHAHEPFFTTKTTAKGLGLGLA ICDNLLRALGGRLEMGNHLEGGAVVRLHLLPGVPGVAAMPQEETRA" misc_feature 5813868..5814554 /locus_tag="PA5165" /note="Cache domain; Region: dCache_1; pfam02743" /db_xref="CDD:460673" misc_feature 5814489..5815511 /locus_tag="PA5165" /note="Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]; Region: COG4191" /db_xref="CDD:443345" gene 5815562..5816950 /locus_tag="PA5166" /db_xref="GeneID:879963" CDS 5815562..5816950 /locus_tag="PA5166" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_253853.1" /db_xref="GeneID:879963" /translation="MSPFAPFDAQTQVLLIDDDPHLRQALRQTLDLAGLKVATLDDAR QLDTAQCKDWPGVVVSDIRMPGIDGMELLRQLHEQDADLPVILITGHGDVPLAVQAMR GGAYDFLEKPFPSDALLDSVRRALEVRRLVLENRTLRLALAERHELHGRLIGRSAGMQ RLREQVGSLAAIQADVLVLGETGAGKEVVARALHDLSSRRDGPFVAINAGALAESVVE SELFGHEAGAFTGAQKRRIGKFEYANGGTLFLDEIESMSLDVQVKLLRLLQERVVERL GSNQLIPLDIRIIAATKEDLRQAADQGRFRADLYYRLNVASLRIPPLRERGEDIPLLF RHFAEAGAMRHGLTPRELDAGQSARLLAYDWPGNVRELQNAAERFALGLGLSLDDGVL PDAADEPHNLSAKVEAFERSLIAAELERPHNSLRSVAEALGIPRKTLHDKLRKHGLPF NTPGENPPDDGE" misc_feature 5815598..5816902 /locus_tag="PA5166" /note="DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]; Region: AtoC; COG2204" /db_xref="CDD:441806" protein_bind complement(5816938..5816950) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA5167" /bound_moiety="AmrZ" protein_bind 5816969..5816981 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA5167" /bound_moiety="AmrZ" gene 5817191..5818186 /locus_tag="PA5167" /db_xref="GeneID:879964" CDS 5817191..5818186 /locus_tag="PA5167" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate-binding protein" /protein_id="NP_253854.1" /db_xref="GeneID:879964" /translation="MLKHTAKALVCALSLTVAGIVQAADPIVIKFSHVVAEHTPKGQG ALLFKKLVEERLPGKVKVEVYPNSSLFGDGKEMEALLLGDVQIIAPSLAKFEQYTKKL QIFDLPFLFDNIQAVDRFQQSPQGKELLTSMQDKGITGLGYWHNGMKQLSANKPLREP KDARGLKFRVQASKVLEEQFKAVRANPRKMSFAEVYQGLQTGVVNGTENPWSNIYSQK MHEVQKYITESDHGVLDYMVITNTKFWNGLPEDVRGVLAKTMDEVTVEVNKQAEALNQ GDKQRIVEAKTSEIIELTPEQRAEWRKAMQPVWKKFEGEIGADLIKAAEAANQAQ" misc_feature 5817272..5818165 /locus_tag="PA5167" /note="Uncharacterized substrate-binding protein of the Tripartite ATP-independent Periplasmic transporter family; the type 2 periplasmic-binding protein fold; Region: PBP2_TRAP_SBP_like_1; cd13674" /db_xref="CDD:270392" misc_feature order(5817695..5817697,5817701..5817703,5817764..5817766, 5817815..5817820,5817827..5817829,5817890..5817892) /locus_tag="PA5167" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270392" gene 5818202..5818834 /locus_tag="PA5168" /db_xref="GeneID:877772" CDS 5818202..5818834 /locus_tag="PA5168" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="dicarboxylate transporter" /protein_id="NP_253855.1" /db_xref="GeneID:877772" /translation="MHALARVWARLEEGLIAFLLAAMTLVTFVYVVLNNLYTLLYDLA DLWEGGNETLLAIGDGVLTLAQEMTWSNALTKALFAWLIFLGIAYGVRTAGHLGVDVL VKLASRPVQRVLGVIACLACLGYAGLLCVASYDWVKTLFIAGIGAEDLDHFGIRQWHI GLIVPVGFALVFIRFAEILVRILRNRQTGLGLADEAADALKLTEHEEPKA" misc_feature 5818202..5818786 /locus_tag="PA5168" /note="TRAP-type C4-dicarboxylate transport system, small permease component YiaM [Carbohydrate transport and metabolism]; Region: DctM; COG3090" /db_xref="CDD:442324" gene 5818831..5820114 /locus_tag="PA5169" /db_xref="GeneID:877773" CDS 5818831..5820114 /locus_tag="PA5169" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate transporter" /protein_id="NP_253856.1" /db_xref="GeneID:877773" /translation="MTILFLFLLLFLLMFIGVPIAVSLGLSGALTILLFSPDSVRSLA IKLFETSEHYTLLAIPFFLLSGAFMTTGGVARRLIDFANACVGHIRGGLAIAAVLACM LFAALSGSSPATVAAVGSIAIAGMVRSGYPQAFGAGIVCNAGTLGILIPPSIVMVVYA AATETSVGKLFIAGVVPGLLLGLILMVVIYIVARVKKLPAMPRVSLREWLASARKALW GLLLMVIILGGIYSGAFTPTEAAAVAAVYSAFVALFVYRDMRLSECPKVLLESGKLTI MLMFIIANAMLFAHVLTTEQIPQSIASWVTELGLSPWMFLLVVNIVLLIAGNFMEPSA IILILAPIFFPIAMELGIDPIHLGIIMVVNMEIGLITPPVGLNLFVTSAVTGMPLGAT IRAALPWLMILLVFLIIVTYIPAVSLALPNWLGMS" misc_feature 5818831..5820108 /locus_tag="PA5169" /note="TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]; Region: DctQ; COG1593" /db_xref="CDD:441201" protein_bind complement(5820786..5820827) /experiment="DNAse footprinting [PMID: 10198009]" /experiment="EMSA [PMID: 10198009]" /experiment="Site directed mutagenesis [PMID: 10198009]" /note="'Transcription factor binding site for NP_249584.; Evidence of regulation for: PA5170, PA5171, PA5172, PA5173'" /bound_moiety="ArgR" protein_bind complement(5820817..5820823) /experiment="2D PAGE [PMID: 18832311]" /experiment="Beta-gal reporter assay [PMID: 18832311]" /experiment="Northern blot [PMID: 18832311]" /experiment="Site directed mutagenesis [PMID: 18832311]" /note="'Transcription factor binding site for NP_252568.; Evidence of regulation for: PA5170, PA5171, PA5172, PA5173'" /bound_moiety="NarL" gene 5820910..5822358 /gene="arcD" /locus_tag="PA5170" /db_xref="GeneID:881800" CDS 5820910..5822358 /gene="arcD" /locus_tag="PA5170" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="arginine/ornithine antiporter" /protein_id="NP_253857.1" /db_xref="GeneID:881800" /translation="MSQESSQKLRLGALTALVVGSMIGGGIFSLPQNMAASADVGAVL IGWAITAVGMLTLAFVFQTLANRKPELDGGVYAYAKAGFGDYMGFSSAWGYWISAWLG NVGYFVLLFSTLGYFFPIFGKGDTVAAIVCASVLLWALHFLVLRGIKEAAFINTVTTV AKVVPLFLFILICLFAFKLDIFTADIWGKSNPDLGSVMNQVRNMMLVTVWVFIGIEGA SIFSSRAEKRSDVGKATVIGFITVLLLLVLVNVLSMGVMTQPELAKLQNPSMALVLEH VVGHWGAVLISVGLLISLLGALLSWVLLCAEIMFAAAKDHTMPEFLRRENANQVPANA LWLTNICVQVFLVVVFFTSGDPDGMDPYTKMLLLATSMILIPYFWSAAYGLLLTLKGE TYENDARERSKDLVIAGIAVAYAVWLLYAGGLKYLLLSALLYAPGAILFAKAKHEVGQ PIFTGIEKLIFAAVVIGALVAAYGLYDGFLTL" misc_feature 5820928..5822355 /gene="arcD" /locus_tag="PA5170" /note="arginine-ornithine antiporter; Region: arg_ornith_anti; TIGR03810" /db_xref="CDD:163522" gene 5822380..5823636 /gene="arcA" /locus_tag="PA5171" /db_xref="GeneID:881801" CDS 5822380..5823636 /gene="arcA" /locus_tag="PA5171" /EC_number="3.5.3.6" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="arginine deiminase" /protein_id="NP_253858.1" /db_xref="GeneID:881801" /translation="MSTEKTKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDD VIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEALKWILDRKITADSVGLG LTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPN TQFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDH GSSTLEGGDVMPIGNGVVLIGMGERSSRQAIGQVAQSLFAKGAAERVIVAGLPKSRAA MHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTFLEVVAESLG LKKLRVVETGGNSFAAEREQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITI SASELGRGRGGGHCMTCPIVRDPIDY" misc_feature 5822386..5823627 /gene="arcA" /locus_tag="PA5171" /note="arginine deiminase; Provisional; Region: PRK01388" /db_xref="CDD:234949" gene 5823716..5824726 /gene="arcB" /locus_tag="PA5172" /db_xref="GeneID:881792" CDS 5823716..5824726 /gene="arcB" /locus_tag="PA5172" /EC_number="2.1.3.3" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="ornithine carbamoyltransferase" /protein_id="NP_253859.1" /db_xref="GeneID:881792" /translation="MAFNMHNRNLLSLMHHSTRELRYLLDLSRDLKRAKYTGTEQQHL KRKNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDPNSSQIGHKESMKDTARVLGRMY DAIEYRGFKQEIVEELAKFAGVPVFNGLTDEYHPTQMLADVLTMREHSDKPLHDISYA YLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTED PKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLP AFHNSETKVGKQIAEQYPNLANGIEVTEDVFESPYNIAFEQAENRMHTIKAILVSTLA DI" misc_feature 5823716..5824720 /gene="arcB" /locus_tag="PA5172" /note="ornithine carbamoyltransferase; Validated; Region: PRK02102" /db_xref="CDD:179366" gene 5824787..5825719 /gene="arcC" /locus_tag="PA5173" /db_xref="GeneID:881793" CDS 5824787..5825719 /gene="arcC" /locus_tag="PA5173" /EC_number="2.7.2.2" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="carbamate kinase" /protein_id="NP_253860.1" /db_xref="GeneID:881793" /translation="MRIVVALGGNALLRRGEPMTADNQRENVRIAAEQIAKVAPGNEL VIAHGNGPQVGLLALQGAAYDKVSPYPLDVLGAETEGMIGYMIEQEMGNLLPFEVPFA TILTQVEVDGKDPAFQNPTKPIGPVYSREEAERLAAEKGWSIAPDGDKFRRVVPSPRP KRIFEIRPVKWLLEKGTIVICAGGGGIPTMYDEAGKKLSGVEAVIDKDLCSSLLAQEL VADILIIATDVDAAYVDWGKPTQKAIAQAHPDELERLGFAAGSMGPKVQAAIEFARAT GKDAVIGSLADIVAITEGKAGTRVSTRKAGIEYR" misc_feature 5824787..5825713 /gene="arcC" /locus_tag="PA5173" /note="carbamate kinase; Reviewed; Region: PRK12354" /db_xref="CDD:183466" misc_feature order(5824802..5824804,5824808..5824813,5824931..5824939, 5825150..5825152,5825402..5825410) /gene="arcC" /locus_tag="PA5173" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:239768" misc_feature order(5824811..5824813,5825465..5825470,5825483..5825485, 5825492..5825494,5825555..5825557,5825567..5825572, 5825579..5825581) /gene="arcC" /locus_tag="PA5173" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:239768" misc_feature order(5824811..5824813,5825465..5825470,5825483..5825485, 5825492..5825494,5825555..5825557,5825567..5825572, 5825579..5825581) /gene="arcC" /locus_tag="PA5173" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:239768" misc_feature order(5824961..5824963,5824994..5824996,5825003..5825008, 5825015..5825017,5825027..5825032,5825039..5825041, 5825048..5825053,5825063..5825065,5825093..5825101, 5825105..5825107,5825279..5825281,5825288..5825290, 5825378..5825380,5825384..5825386) /gene="arcC" /locus_tag="PA5173" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:239768" protein_bind 5825084..5825096 /gene="arcC" /locus_tag="PA5173" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 5826135..5828039 /locus_tag="PA5174" /db_xref="GeneID:881783" CDS 5826135..5828039 /locus_tag="PA5174" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="beta-ketoacyl synthase" /protein_id="NP_253861.1" /db_xref="GeneID:881783" /translation="MSRLPVIVGFGGYNAAGRSSFHHGFRRMVIESMDPQARQETLAG LAVMMKLVKAEGGRYLAEDGTPLSPEDIERRYAERIFASTLVRRIEPQYLDPDAVHWH KVLELSPAEGQALTFKASPKQLPEPLPANWSIAPAEDGEVLVSIHERCEFKVDSYRAL TVKSAGQLPTGFEPGELYNSRFHPRGLQMSVVAATDAIRSTGIDWKTIVDNVQPDEIA VFSGSIMSQLDDNGFGGLMQSRLKGHRVSAKQLPLGFNSMPTDFINAYVLGSVGMTGS ITGACATFLYNLQKGIDVITSGQARVVIVGNSEAPILPECIEGYSAMGALATEEGLRL IEGRDDVDFRRASRPFGENCGFTLAESSQYVVLMDDELALRLGADIHGAVTDVFINAD GFKKSISAPGPGNYLTVAKAVASAVQIVGLDTVRHASFVHAHGSSTPANRVTESEILD RVASAFGIDGWPVTAVKAYVGHSLATASADQLISALGTFKYGILPGIKTIDKVADDVH QQRLSISNRDMRQDKPLEVCFINSKGFGGNNASGVVLSPRIAEKMLRKRHGQAAFAAY VEKREQTRAAARAYDQRALQGDLEIIYNFGQDLIDEHAIEVSAEQVTVPGFSQPLVYK KDARFSDMLD" misc_feature 5826507..5827766 /locus_tag="PA5174" /note="'elongating' condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as...; Region: elong_cond_enzymes; cd00828" /db_xref="CDD:238424" misc_feature order(5826975..5826977,5827434..5827436,5827548..5827550) /locus_tag="PA5174" /note="active site" /db_xref="CDD:238424" gene complement(5828086..5828907) /gene="cysQ" /locus_tag="PA5175" /db_xref="GeneID:881784" CDS complement(5828086..5828907) /gene="cysQ" /locus_tag="PA5175" /note="class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in (if known)." /codon_start=1 /transl_table=11 /product="3'(2'),5'-bisphosphate nucleotidase CysQ" /protein_id="NP_253862.1" /db_xref="GeneID:881784" /translation="MRPVPWGELVALVRRAGEAILPHWRADVVVRSKADESPVTAADL AAHHILEAGLRALAPDIPVLSEEDCEIPLSERGHWRRWWLVDPLDGTKEFISGSEEFT VNVALVEDGRVLFGLVGVPVSGRCYYGGAGLGAWREEADGRAQPISVRLEPEEAFTVV ASKRHGSPAQERLLDGLSERFGDLRRASIGSSLKFCLLAEGAADCYPRLTPTSQWDTA AAQGVLEGAGGEVLDLHGAPFTYEPREDYLNGSFLALPRAAEWRSELIQLARALH" misc_feature complement(5828125..5828886) /gene="cysQ" /locus_tag="PA5175" /note="3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase [Inorganic ion transport and metabolism]; Region: CysQ; COG1218" /db_xref="CDD:440831" gene complement(5828904..5829470) /locus_tag="PA5176" /db_xref="GeneID:881740" CDS complement(5828904..5829470) /locus_tag="PA5176" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="ADP-ribose diphosphatase NudE" /protein_id="NP_253863.1" /db_xref="GeneID:881740" /translation="MRQKPTVLASEIVAKSRLFDVEELQLRFSNGVERTYERLVGKGQ GYGAVMVVAMLDAEHAVLVEEYCAGVDEYQLSLPKGLVEPGEDILAAANRELKEEAGY GARQLEHITELSLSPGYMSQRIQVVLARDLYEERLPGDEPEPMSVDRISLRELSSLAQ HAQFSEGRALAALYLVRDLLTQRGEYQA" misc_feature complement(5828919..5829470) /locus_tag="PA5176" /note="adenosine nucleotide hydrolase NudE; Provisional; Region: nudE; PRK11762" /db_xref="CDD:183303" gene 5829596..5830261 /locus_tag="PA5177" /db_xref="GeneID:881741" CDS 5829596..5830261 /locus_tag="PA5177" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_253864.1" /db_xref="GeneID:881741" /translation="MPTLPWSAIDTVLLDMDGTLLDLHFDNHFWLEHLPQRYAERNGL SRTEADAVLEPLFREHAGQLNWYCLDFWSRELDLSIRELKHEVAHLISLRPHADTFLA ALRRAGKRVALITNAHRDSLSLKLERIELAPYFDRLISSHDYGYPKEDARFWSALQAD FGFDPQRSLFIDDSLPILRSARAYGVAHLLAVRHPDSRGQVRDTEEFAAQEDYRRLLE GLP" misc_feature 5829599..5830255 /locus_tag="PA5177" /note="The haloacid dehalogenase (HAD) superfamily includes carbon and phosphorus hydrolases such as 2-haloalkonoate dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, among others. These...; Region: Haloacid Dehalogenase-like Hydrolases; cl21460" /db_xref="CDD:473868" misc_feature order(5829638..5829652,5829938..5829943,5830037..5830039, 5830109..5830114,5830121..5830126) /locus_tag="PA5177" /note="active site" /db_xref="CDD:319763" gene complement(5830313..5830750) /locus_tag="PA5178" /db_xref="GeneID:881721" CDS complement(5830313..5830750) /locus_tag="PA5178" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253865.1" /db_xref="GeneID:881721" /translation="MGIFAFVKEAGEKLWDTLTGHEAQAAESLKEHVAKVGLGNPNIQ VSVEGDKVIASGEVASQEEKEKILLALGNVAGVSSVEDKITVAQAAPEARFVTVKKGD TLSAIAKAEYGNANAYMKIFEANKPMLSHPDKIYPGQVLRIPE" misc_feature complement(5830316..5830750) /locus_tag="PA5178" /note="LysM domain/BON superfamily protein; Provisional; Region: PRK11198" /db_xref="CDD:236880" gene 5830924..5831805 /locus_tag="PA5179" /db_xref="GeneID:881722" CDS 5830924..5831805 /locus_tag="PA5179" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253866.1" /db_xref="GeneID:881722" /translation="MDIKQLKFLCALDETRHFGQAAARCHVTQPTLSMRLRSLEEELG LELVRRSQRFEGFTEAGERVLAWARSLLAAQEGLYAEAAACRGQLVGTLRLGVVPLAS FDPMRLVQHMAGRHPELRFQLYSLSSEQVLEGLARNQFDLGVSYLDRLDRSHFEGIEL AETRMGLLHHPSHFPLDAALLNWEALAGLPLGLLSAGMHFRQSIDHNFRSRGLSPIAR LETDSVQQLLQAVQRGLCCAIMPLGSEVDGELRLIPIEDAHTLAALGLIIRSGQPRSA LAEACFEEARNWLAPQS" misc_feature 5830924..5831793 /locus_tag="PA5179" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 5831902..5832741 /locus_tag="PA5180" /db_xref="GeneID:881723" CDS 5831902..5832741 /locus_tag="PA5180" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253867.1" /db_xref="GeneID:881723" /translation="MPCQPACPVSADTWAPSAVPDDYRYADLHLPQQVGQASLAAECA VAISYNGLNQAVMMASPEDIEDFVRGFSLSSGFVESIDDIYEIRVSGQGESLHAEVEI SSRAFWNLKRQRRQLAGTSGCGLCGVEALEQALPQLPERSPQALPPAAHLGALRQRIE QAQRLARHSGALHAALYFDGHGELRLCREDIGRHNALDKLIGALHRQGLDAARGFAVV TSRCSLELIHKAVRAGIGTLVSLSAPTALTVQWARRHQLNLIHQPHHNAPRVYSPAPA ATE" misc_feature 5832013..5832717 /locus_tag="PA5180" /note="Formate dehydrogenase assembly factor FdhD, a sulfurtransferase [Energy production and conversion]; Region: FdhD; COG1526" /db_xref="CDD:441135" gene 5832749..5835070 /locus_tag="PA5181" /db_xref="GeneID:881731" CDS 5832749..5835070 /locus_tag="PA5181" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_253868.1" /db_xref="GeneID:881731" /translation="MSLQPLQPRYKPYAGAAAGWGALRSVAHFWLDSKQPFKNLRALL KTNQNGGFDCPGCAWGDSPEDGRVKFCENGAKAVNWEATKRRVDAAFFARYSVSALRE QSDYWLEYQGRLTGPMRYDPLSDHYQPITWDAAFALVAEHLRRLDSPDQAEFYTSGRA SNEAAYLYQLFVRAFGTNNFPDCSNMCHEASGVALGRSVGVGKGSVTFDDFEHADAIF ILGQNPGTNHPRMLEPLREAVKRGAQVVCFNPLKERGLERFQHPQNALEMLTNGSSPL NTAFFRPALGGDMAAIRGIAKFLLAWEREAQAEGSEPVFDHAFIAEHTDGLEAYLAEL DATPWEHLERQSGLSLAEIEQAARMYRRANRVIVCWAMGITQHHHSVAIIQEIVNLQL LRGNLGRPGAGLCPVRGHSNVQGDRTMGINERPPAALLDALERRFGFEVPRHNGHNAV EAIAAMLAGKSKVFIGLGGNFAQATPDSPRTHAALASCDLTVHISTKLNRSHLTTGRD ALILPCLGRTDIDRQAEGPQAVTVEDSFSMIHASYGQLEPLSQQMRSEPAIIAGIAKA TLGNHPVDWDALIANYERIRELIADTIPGFADFNRRVRHPGGFYLGNSAGERRWNTAS GKANFVANPLPRDLLPAQVRDSGLEPDLILQTLRSHDQYNTTIYGLDDRYRGVKGQRE VVFANEADIRRLGYQPGDKVDLVSLWSDGIERRVRRFTLLAFDIPAGQAAAYYPETNP LVPLESVGVGSHTPTSKFIAVRLEKATGDGRII" misc_feature 5832860..5835040 /locus_tag="PA5181" /note="oxidoreductase alpha (molybdopterin) subunit; Region: Fdhalpha-like; TIGR01701" /db_xref="CDD:273765" protein_bind 5834087..5834099 /locus_tag="PA5181" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(5835082..5835480) /locus_tag="PA5181.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:6965630" ncRNA complement(5835082..5835480) /ncRNA_class="other" /locus_tag="PA5181.1" /product="P34" /db_xref="GeneID:6965630" gene 5835380..5835895 /locus_tag="PA5182" /db_xref="GeneID:881732" CDS 5835380..5835895 /locus_tag="PA5182" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253869.2" /db_xref="GeneID:881732" /translation="MKYSSILLLSLSLVGSTAFAGDDTRAAIGGALGGVLGSVVGDAV GGSTGAAIGSGIGGAAGGAVGAGRGNKTEAAIGGGLGAAGGNVIGRQIGGSTGGLIGA ALGGAGGGALGNHYGDGNRRYDDDDDYRDRRYYRRAGYRDGYYRHDNGHHYGQYKKWK RHKHHRRYYDD" gene 5835994..5836401 /locus_tag="PA5183" /db_xref="GeneID:881599" CDS 5835994..5836401 /locus_tag="PA5183" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253870.1" /db_xref="GeneID:881599" /translation="MRKSLLVIAFGLLSAQAALAGDSTKTAVGGGVGGALGNVVGGAI GGSTGAAIGAGLGGAAGGAMTAKDGRKTEAALGGGLGAAGGSVIGNKLGGSTGATIGA GLGGAAGGAVGNNLGKDNDSGHRGKKHRKHKHR" gene complement(5836470..5836685) /locus_tag="PA5183a" /db_xref="GeneID:17373387" CDS complement(5836470..5836685) /locus_tag="PA5183a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719784.1" /db_xref="GeneID:17373387" /translation="MGFLILSRREGEGITLSLKADYPAEELIRQLREGGIRILVTDII GNQARVGIEAPRGVLIVRDELKTAPKG" misc_feature complement(5836491..5836676) /locus_tag="PA5183a" /note="Global regulator protein family; Region: CsrA; pfam02599" /db_xref="CDD:460612" protein_bind 5836796..5836811 /experiment="ChIP-chip [PMID: 19682264]" /experiment="ChIP-PCR [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA5184" /bound_moiety="LasR" gene 5836910..5837467 /locus_tag="PA5184" /db_xref="GeneID:881600" CDS 5836910..5837467 /locus_tag="PA5184" /EC_number="5.4.99.5" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="chorismate mutase" /protein_id="NP_253871.1" /db_xref="GeneID:881600" /translation="MRPSFASWGLLALLLLQGPLLQAQPLSPALQQLLSLSSQRLQLA DQVAQSKAQSGKAVQDSPREEQQLQMLAGQAGSHGVGAEQVRLLFAAQIEANKLVQYR LLSRPLPDAGQAVDLERIRSRLNQLNLELLRGYAPALAELRVDDCRPRLNQALQRQVR VDRLDELHAIALSRAAGDLCHWAEL" misc_feature 5836910..5837458 /locus_tag="PA5184" /note="chorismate mutase; Provisional; Region: PRK09269" /db_xref="CDD:236441" gene complement(5837449..5837892) /locus_tag="PA5185" /db_xref="GeneID:881521" CDS complement(5837449..5837892) /locus_tag="PA5185" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253872.1" /db_xref="GeneID:881521" /translation="MATAPRPLREQYLHFQPISTRWHDNDIYGHVNNVTYYAFFDTAV NTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELAL FLEGQREACAAGRFVHVFVERRSSRPVAIPQELRDALAALQSSAQ" misc_feature complement(5837458..5837859) /locus_tag="PA5185" /note="Acyl-CoA thioesterase FadM [Lipid transport and metabolism]; Region: FadM; COG0824" /db_xref="CDD:440586" gene complement(5837915..5839078) /locus_tag="PA5186" /db_xref="GeneID:881522" CDS complement(5837915..5839078) /locus_tag="PA5186" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="iron-containing alcohol dehydrogenase" /protein_id="NP_253873.1" /db_xref="GeneID:881522" /translation="MQAFSFATTAQILCEAGSAIRLAELCRERRARRVLIVTDPGITR LGLLDAILPGFPRLGLAVEVYDQVLADPPESVVEAALGRARGMAAELVVGFGGGSSMD VAKLVALLAHPEAGQGLGEVFGVGNARGPRLPLIQVPTTAGTGSEVTPIAIVTTGETT KMGVVSPHLLPDLALLDADLTLGLPPAVTAATGIDAMVHAIESYTSKLKKNPLSDLLA REALRLLAANLERAVGDGGDREARQAMLLGACLAGQAFANAPVAAVHALAYPLGGHFH IPHGLSNALVLPEVIRFNAPAAAGLYAELAPLLLGDRLRPGDRDALTVQLIDELAQLS PRNGLPSRLRDAGVDEAMLPRLAADAMLQQRLLVNNPREVGEADALAIYRAAY" misc_feature complement(5837918..5839063) /locus_tag="PA5186" /note="5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor; Region: HVD; cd08193" /db_xref="CDD:341472" misc_feature complement(order(5838242..5838244,5838272..5838274, 5838284..5838286,5838482..5838484,5838494..5838496, 5838515..5838517,5838539..5838541,5838593..5838598, 5838650..5838652,5838656..5838661,5838764..5838766, 5838773..5838775,5838782..5838790,5838962..5838964)) /locus_tag="PA5186" /note="putative active site [active]" /db_xref="CDD:341472" misc_feature complement(order(5838242..5838244,5838284..5838286, 5838482..5838484,5838494..5838496)) /locus_tag="PA5186" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:341472" gene complement(5839105..5840895) /locus_tag="PA5187" /db_xref="GeneID:881523" CDS complement(5839105..5840895) /locus_tag="PA5187" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="NP_253874.1" /db_xref="GeneID:881523" /translation="MDYQAPLRDMRFVLHELFDVGAHCELLGNGIDRELIDGVLEEGA RYTGQVVAPLNRNSDEEGAKLKDGVVTTPTGFREAYRQYSENGWASMTGPTEYGGQGF PQMVSACFHEMLMAASLSFRVYSGLTEGAVLALYKHGDEALRRDYLAKLVSGEWAGTM CLTEPQAGTDLALLRTRAEAQADGSYAISGSKIFISGGEQDLTENIVHLVLARLADAP AGVKGISLFLVPKFVANPDGSLGERNSLGCGAIEHKMGIKGASTCVMNFDGARGWLLG QANQGLACMFTMMNDARFQVGLQGLGIAERAFQGALGYARERLQSRALVGPQAPDKVA DPIIVHPDVRRMLLTQKTLVEGCRMLAACCARQLDLEHGHPDADGRRAATRRAALLIP IVKAFLTDVGQEVASLGVQVCGGHGFIREWGMEQLMRDSRITQIYEGTNGIQALDLVR RKLLGDQGGELLALQGELAVASEALQGRAVLAPLAEPVLQRLEEWRQLTGQVLEACAR DPQEIGATSVDFLQYSAYVLLAALWLQAAARAQEALDGGSGEGDFYRAKLRSADFYLR RILPRASMHREALLGGADCLMALPEEHFSF" misc_feature complement(5839114..5840889) /locus_tag="PA5187" /note="acyl-CoA dehydrogenase; Provisional; Region: PTZ00456" /db_xref="CDD:185635" protein_bind 5840489..5840501 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(5840897..5842132) /locus_tag="PA5188" /db_xref="GeneID:881485" CDS complement(5840897..5842132) /locus_tag="PA5188" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="3-hydroxyacyl-CoA dehydrogenase" /protein_id="NP_253875.1" /db_xref="GeneID:881485" /translation="MSQNFSFRQAAVIGAGTMGRGIVMCLANAGLDVQWLDSNPQMLN QALGAVADTYAHNVRQGRIGEEEAAARRARITPVQHLAAMREADLVIEAVYENLELKQ SIFRELDAALKPSAVLASNTSYLDIDAIAAVTARPRQVLGLHFFSPAHIMRLLEIVRG AQTAPAVLEAALALGERMGKVSVVAGNCHGFIGNRMLEPYATEARLMLLEGALPYQVD RALQAFGFAMGPFRMYDVVGIDLEWRARELAGVGQDQPAVQVDNRLCEMGRFGQKSGA GYYRYAPGSRQAEHDTEVDALVLRVAETLGYPRRDFADEEILERCLLALVNEGAKILD EGIAARSADIDTVYLNGYGFPAAEGGPMAWADRLGAADLLQRLRFLEQRHGARWKPAS LVERLAAEGGAFADLQEVR" misc_feature complement(5841290..5842117) /locus_tag="PA5188" /note="3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]; Region: FadB; COG1250" /db_xref="CDD:440862" misc_feature complement(5840930..5841184) /locus_tag="PA5188" /note="3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; Region: 3HCDH; pfam00725" /db_xref="CDD:395588" gene 5842275..5843183 /locus_tag="PA5189" /db_xref="GeneID:881486" CDS 5842275..5843183 /locus_tag="PA5189" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253876.1" /db_xref="GeneID:881486" /translation="MNIQTFDLNLLRVLDALLRERNVSRAAERLALSQPAVSNALNRL RELLDDPLLVRAGRAMQPTPRALALEAPIRAALRQIEQSLGDGEGFDPGRSRQRFTVA VTDYVELICMPALMRRLSERAPGISIAIQHLTPTLPAEALDKGELDLVLGRFENVPAR FQRRHWASETLQLVARRQHPLLAQAPDLATFLELQHLWVHGGQTKGMVDQWLGSQGLK RQVAYTTPNYLQAAHIAAYSDLVGVLPRQLAHYFERLLPLQSFDLPFDLGPFHLELVF LAQRERDIALQWLVEQIRQVGAAGPD" misc_feature 5842296..5842472 /locus_tag="PA5189" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 5842566..5843162 /locus_tag="PA5189" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" misc_feature order(5842611..5842616,5842620..5842625,5842632..5842634, 5842644..5842646,5842650..5842670,5842938..5842955, 5842971..5842976,5842980..5842985) /locus_tag="PA5189" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" gene complement(5843198..5843800) /locus_tag="PA5190" /db_xref="GeneID:877943" CDS complement(5843198..5843800) /locus_tag="PA5190" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="nitroreductase" /protein_id="NP_253877.1" /db_xref="GeneID:877943" /translation="MHIEDAVRSRRAIKGYDSSFSLTREEKDHLLDLALHAPSAFNLQ HVRLVEVSDPQLRVQLREVAWDQAQVTDAAMLVVVCAQLDSWERNAQRVWDGAPEAVQ AFMAGAIDTYYRGKPQVQRDEAMRSCGLLAQTLMLVARGQGLDSCPMDGFDFDAVARL INLPDNHVIGLMVAVGKKAVEPWPRSGKLPREELVIRDRF" misc_feature complement(5843219..5843791) /locus_tag="PA5190" /note="nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN; Region: MhqN-like; cd02137" /db_xref="CDD:380314" misc_feature complement(order(5843219..5843242,5843297..5843299, 5843312..5843320,5843351..5843353,5843378..5843380, 5843387..5843392,5843399..5843404,5843411..5843416, 5843633..5843638,5843645..5843665,5843669..5843671, 5843675..5843677,5843681..5843683,5843687..5843698, 5843702..5843710,5843717..5843719,5843771..5843773, 5843780..5843785,5843789..5843791)) /locus_tag="PA5190" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:380314" misc_feature complement(order(5843237..5843239,5843243..5843245, 5843288..5843290,5843348..5843362,5843411..5843413, 5843549..5843551,5843594..5843596,5843675..5843689, 5843765..5843773)) /locus_tag="PA5190" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:380314" gene 5844054..5844410 /locus_tag="PA5191" /db_xref="GeneID:877944" CDS 5844054..5844410 /locus_tag="PA5191" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253878.1" /db_xref="GeneID:877944" /translation="MNRMGQLALFGLLVGTSSNLFAAPGSISGVIRFTGAIVEPPCSM SAPRQDESKGSFHLSGCPMQARTADVSIRSMKTGEVRHLQPSDTVIGERDFSARYELA GSGRRSGNYLITVTYP" misc_feature 5844078..>5844293 /locus_tag="PA5191" /note="Fimbrial protein; Region: Fimbrial; cl01416" /db_xref="CDD:445401" gene complement(5844468..5846009) /gene="pckA" /locus_tag="PA5192" /db_xref="GeneID:879312" CDS complement(5844468..5846009) /gene="pckA" /locus_tag="PA5192" /EC_number="4.1.1.49" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate carboxykinase" /protein_id="NP_253879.1" /db_xref="GeneID:879312" /translation="MTQANNAVYTDISAAQLVEEAIRRGEGELAANGSLVVRTGHRTG RSPVDRFIVEEPSTKDAIAWGNINRPFPADKFDALWARVEAFNNAQDHFVSHVHVGSA EAYYLPVKMTTATAWQNLFGRCLFIEPEQYNPAGKDEWQVLNVANFECVPERDGTNSD GCVILNFAQKKVLIAGMRYAGEMKKAMFSVQNFLLPERDVLPMHCAANIGEAGDVTLF FGLSGTGKTTLSADESRYLIGDDEHGWGEGVVFNVEGGCYAKCIDLSEKNEPVIWKAI KFGAVLENVVLDEERVPNYADDSLTQNSRAAYPLEHVEKRSEKNLGGEPNAVIFLTCD LTGVLPPVSILNNEQAAYHFLSGYTALVGSTEMGSGGGIKSTFSTCFGAPFFPRPAGV YAELLIKRIKAFGSKVYLVNTGWTGGGYGVGKRFNIPTTRGVIAAIQSGALIGAETEH LEIINLDVPKAVPGVETNLLNPRNTWADKAAYDEAAKGLAKQFIENFKKFEVSDAIKA AGPQL" misc_feature complement(5844471..5845997) /gene="pckA" /locus_tag="PA5192" /note="Phosphoenolpyruvate carboxykinase, ATP-dependent [Energy production and conversion]; Region: PckA; COG1866" /db_xref="CDD:441471" gene complement(5846125..5847018) /gene="yrfI" /locus_tag="PA5193" /db_xref="GeneID:879313" CDS complement(5846125..5847018) /gene="yrfI" /locus_tag="PA5193" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="heat shock protein 33" /protein_id="NP_253880.1" /db_xref="GeneID:879313" /translation="MSHSDQSQRFLFDDTDVRGEMVDLERSYSEVLAKHPYPEPVAQL LGEMLAAASLLCGTLKFDGLLVLQARSSGAVPLLMVECSSDRQVRGLARYSAESIGAD AGMQELMPEGVLTLTVDPVKGQRYQGIVALEGVNLAECLSNYFASSEQLPTRFWLNAN GRRARGLLLQQLPADRLKDPEAREASWQHLTTLADTLTAEELLALDNETVLHRLYHEE TVRLFEPQPLVFHCSCSRERSANALVSLGQADCERLLEEEEGSISIDCQFCNQRYLFD ASDVAQLFAGAGSQGPSETRH" misc_feature complement(5846161..5847009) /gene="yrfI" /locus_tag="PA5193" /note="Redox-regulated molecular chaperone, HSP33 family [Posttranslational modification, protein turnover, chaperones]; Region: HslO; COG1281" /db_xref="CDD:440892" gene 5847131..5847934 /locus_tag="PA5194" /db_xref="GeneID:880279" CDS 5847131..5847934 /locus_tag="PA5194" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253881.1" /db_xref="GeneID:880279" /translation="MDNASPFQAAWQWRKFAICHLLALLLLILWLWGPTRELMNGFDF WLFDKLNGSLALNETWLKLWGLLSTRPFDAVVGVILLCLLIRGDWLLPANQVRRLTFG FIVTLLILVVIRVLYAKIAHHLHWQHASLSMLMDKAIHLSDHFPDWERVWEIKDRSKR SFPGDHASVLLVWALFMSLFARRAGQFLLIWTLAVLFMLPRLVAGAHWGQDDYIGGLQ MALLALAWGCYTPLAAKASGWLVQVTEPLFRLLAKLPLIGRLGVVRDSA" misc_feature 5847242..5847838 /locus_tag="PA5194" /note="Membrane-associated phospholipid phosphatase [Lipid transport and metabolism]; Region: PgpB; COG0671" /db_xref="CDD:440435" misc_feature <5847548..5847808 /locus_tag="PA5194" /note="PAP2 superfamily; Region: PAP2; pfam01569" /db_xref="CDD:426329" gene complement(5847972..5848367) /locus_tag="PA5195" /db_xref="GeneID:880280" CDS complement(5847972..5848367) /locus_tag="PA5195" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="heat shock protein" /protein_id="NP_253882.1" /db_xref="GeneID:880280" /translation="MSEKDDDKVRLDKWLWAARFFKTRALAKAAIEGGKVHCRGERCK PSKEPRVGEELTIRTGFDERTVTIRALAVVRRGAQEAQALYEETADSVESRERAAAMR KAGALGVQTEGRPSKKQRRQIHQLRGGQD" misc_feature complement(5847984..5848355) /locus_tag="PA5195" /note="Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain [Translation, ribosomal structure and biogenesis]; Region: HslR; COG1188" /db_xref="CDD:440801" gene 5848577..5849011 /locus_tag="PA5196" /db_xref="GeneID:880281" CDS 5848577..5849011 /locus_tag="PA5196" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253883.1" /db_xref="GeneID:880281" /translation="MVGLRAKIDTGASTSSLHASDIVPFERDGEKWVRFTAHLGTLVQ RRHRCEAPMVARKSIRSSNGQAQTRYVIRTTLALGDRMWPVEFTLACRKSMRYRVLLG SKALIAGQLVVNPALAYVQDRPESPAALPAATSIDLLDGSPV" misc_feature 5848586..5848951 /locus_tag="PA5196" /note="Uncharacterized conserved protein [Function unknown]; Region: COG4067" /db_xref="CDD:443244" gene 5849143..5850048 /gene="rimK" /locus_tag="PA5197" /db_xref="GeneID:880288" CDS 5849143..5850048 /gene="rimK" /locus_tag="PA5197" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribosomal protein S6 modification protein" /protein_id="NP_253884.1" /db_xref="GeneID:880288" /translation="MKIAVLSRNPRLYSTRRLVEAGRERGHEMVVIDTLRAYMNIASH KPQIHYRGQPLEGFDAVIPRIGASVTFYGCAVLRQFEMMGVFPLNESVAIARSRDKLR SLQLLSRKGIGLPVTGFAHSPDDVPDLIEMVGGAPLVIKLLEGTQGIGVVLCETEKAA ESVLEAFMGLKHNIMVQEYIKEAGGADIRCFVVGDKVIASMKRQAAPGEFRSNLHRGG SASLIKITPEERMTAIRAARVMGLNVAGVDILRSNHGPLVMEVNSSPGLEGIESTTGK DIAGIIIQYLEKNGGPHLARTKGKG" misc_feature 5849143..5850039 /gene="rimK" /locus_tag="PA5197" /note="30S ribosomal protein S6--L-glutamate ligase; Region: PRK10446" /db_xref="CDD:182468" gene 5850239..5851162 /locus_tag="PA5198" /db_xref="GeneID:880289" CDS 5850239..5851162 /locus_tag="PA5198" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="LD-carboxypeptidase" /protein_id="NP_253885.1" /db_xref="GeneID:880289" /translation="MTSRPSSDQTWQPIDGRVALIAPASAIATDVLEATLRQLEVHGV DYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGCGQLLPGLDWGR LQAASPRPLIGFSDISVLLSAFHRHGLPAIHGPVATGLGLSPLSAPREQQERLASLAS VSRLLAGIDHELPVQHLGGHKQRVEGALIGGNLTALACMAGTLGGLHAPAGSILVLED VGEPYYRLERSLWQLLESIDARQLGAICLGSFTDCPRKEVAHSLERIFGEYAAAIEVP LYHHLPSGHGAQNRAWPYGKTAVLEGNRLRW" misc_feature 5850290..5851132 /locus_tag="PA5198" /note="LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein; Region: Peptidase_S66; cd07025" /db_xref="CDD:132882" misc_feature order(5850512..5850517,5850827..5850832,5850836..5850841, 5850908..5850913,5850917..5850922,5850929..5850934, 5851040..5851045) /locus_tag="PA5198" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132882" misc_feature order(5850581..5850583,5850887..5850889,5851091..5851093) /locus_tag="PA5198" /note="catalytic triad [active]" /db_xref="CDD:132882" gene complement(5851239..5852558) /gene="amgS" /locus_tag="PA5199" /db_xref="GeneID:880300" CDS complement(5851239..5852558) /gene="amgS" /locus_tag="PA5199" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein AmgS" /protein_id="NP_253886.1" /db_xref="GeneID:880300" /translation="MKTPLWFPQSFFARTLWLVLIVVLFSKALTLVYLLMNEDVIVDR QYSHGAALTIRAFWAADEESRAAIAKASGLRWVPSSADQPGEQHWPYTEIFQRQMQME LGPDTETRLRIHQPSQLWVRAPSLGEGWLAVPLYPHPLRGQRIWSVLGWFLGIGLLST AAAWIFVRQLSQPLKRLVVAARQFGQGRSVRLPLGPETPSEMAEVYRAFNQMAEDIEQ GGRERELMLAGVSHDLRTPLTRLRLSLELLPESEREMVEDMIRDIEDMDAILDQFLAF IRDGRDEPVEEGDLTDLVREVVAPFNQTREQVRMALQPVPAMPLRRVSMKRLLGNLID NALNHGGGSVEVASYVAGESAAPYVVLSVLDRGQGIDPAEVDSIFNPFIRGDKARGGK GTGLGLAIVKRIAAQHGGSVELRNRDGGGLEARVCLPLGLLLPRGAA" misc_feature complement(5851278..5852540) /gene="amgS" /locus_tag="PA5199" /note="osmolarity sensor protein; Provisional; Region: envZ; PRK09467" /db_xref="CDD:236531" gene complement(5852653..5853396) /gene="amgR" /locus_tag="PA5200" /db_xref="GeneID:880301" CDS complement(5852653..5853396) /gene="amgR" /locus_tag="PA5200" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="osmolarity response regulator" /protein_id="NP_253887.1" /db_xref="GeneID:880301" /translation="MSNPAALAEGEKILVVDDDARLRRLLERFLDEQGYRVRAVENTE QMDRLLSRELFQLVVLDLMLPGEDGLTACRRLREQNNQVPIIMLTAKGDEGSRIQGLE LGADDYLAKPFNPRELLARIKAVLRRQAPLVPGAPAGADEVVTFGDYQLFLATRELKK GDEVHMLTTGEFAVLKALVQHAREPLTRDKLMNLARGREWDALERSIDVQISRLRRLI EPDPSKPRYIQTVWGVGYVFVPDGNARKA" misc_feature complement(5852665..5853375) /gene="amgR" /locus_tag="PA5200" /note="osmolarity response regulator; Provisional; Region: ompR; PRK09468" /db_xref="CDD:181883" gene 5853585..5855924 /locus_tag="PA5201" /db_xref="GeneID:878507" CDS 5853585..5855924 /locus_tag="PA5201" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253888.1" /db_xref="GeneID:878507" /translation="MDSINTRIAEELSALPSGRVQPQQVAAAVALLDEGSTVPFIARY RKEVTGSLDDTQLRMLEERLRYLRELEERRGAILASIEEQGKLTPELARDIKLADTKT RLEDLYLPYKQKRRTKGQIALEAGLGALADALFDDPTLVPESEAARFVDAEKGFADVK AVLEGAKYILMERFAEDATLLDKLRVFMKNEATLTARVVPGKEQEGAKFSDYFEHDEP LKSAPSHRALAIFRGRNEGVLSASLKVGEEAPGTLHPCEVMIAERFGLSNQGRAADKW LAEVVRWTWKVKLYTHLETDLFGELRDGAEDEAISVFARNLHDLLLAAPAGPRATLGL DPGLRTGVKVAVVDATGKLLDTATVYPHAPKNQWDQTLAVLAALCAKHQVELIAIGNG TASRETDKLAGELIKKYPGMKLTKIMVSEAGASVYSASELAAKEFPELDVSLRGAVSI ARRLQDPLAELVKIEPKSIGVGQYQHDVSQLKLARSLDAVVEDCVNAVGVDVNTASAA LLARISGLNSTLAQNIVAHRDANGAFRTRDELKKVSRLGEKTFEQAAGFLRVMNGDNP LDASAVHPETYPLVQRIAADTERDIRSLIGDSAFLKRLDPKKFTDETFGLPTVTDILK ELDKPGRDPRPEFKTAEFQEGVESLKDLKPGMVLEGVVTNVTNFGAFVDIGVHQDGLV HISALSEKFVKDPYEVVKAGDIVKVKVMEVDIPRNRVGLSMRMSDTPGEKVEGQRGGR PTGSGQPRQERGAPRGQSAPPANNAMAALFANAKQLKKK" misc_feature 5853585..5855780 /locus_tag="PA5201" /note="Transcriptional accessory protein Tex/SPT6 [Transcription]; Region: Tex; COG2183" /db_xref="CDD:441786" gene 5855936..5856325 /locus_tag="PA5202" /db_xref="GeneID:878508" CDS 5855936..5856325 /locus_tag="PA5202" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253889.1" /db_xref="GeneID:878508" /translation="MSEMPAREQMISAYSELVGLDPVSLGDGVAEVRLPMAAHLRNRG GVMHGGALFSLMDVTMGLACSSSHGFDRQSVTLECKINYIRAVADGEVRCVARVLHAG RRSLVVEAEVRQGDKLVAKGQGTFAQL" misc_feature 5855936..5856316 /locus_tag="PA5202" /note="Acyl-CoA thioesterase PaaI, contains HGG motif [Secondary metabolites biosynthesis, transport and catabolism]; Region: PaaI; COG2050" /db_xref="CDD:441653" gene 5856532..5858115 /gene="gshA" /locus_tag="PA5203" /db_xref="GeneID:879474" CDS 5856532..5858115 /gene="gshA" /locus_tag="PA5203" /EC_number="6.3.2.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutamate--cysteine ligase" /protein_id="NP_253890.1" /db_xref="GeneID:879474" /translation="MSDLLSRRLALLGAAANLPLLTECLHGIERECLRVDSDGKLALT PHPRALGSTLTHPQITTDYSEALLEFITPTETDVADTLGDLERIHRFASSKLDGEYLW SPSMPCELPDEESIPIARYGSSMIGRLKYVYRKGLALRYGKTMQCIAGIHYNFSLPER LWPLLRQAEGSELSERDYQSAAYIALIRNFRRYSWLLMYLFGASPALDAGFLRGRPSQ LERLDEHTLYLPYATSLRMSDLGYQNNAQAGLTPCYNDLQSYIDSLRQAVSTPYPPYE KVGTKQDGEWVQLNTNILQIENEYYSSIRPKRVTYTGERPVQALAARGVQYVEVRCLD INPFLPLGIDLDEARFLDAFLLFCAFSDSPLLNGECSDATDNFLAVVKEGRRPGLQLQ RRGQPVELQVWANELLERIADTAALLDRARGGEAHAAALAAQRAKVADAELTPSAQVL KVMRERGESFEAFSLRQSREHAEYFRQHPLAAEEQARFEKMASDSLAEQTELERDQDG DFDTFVAAYQASILGLISN" misc_feature 5856532..5858082 /gene="gshA" /locus_tag="PA5203" /note="Gamma-glutamylcysteine synthetase [Coenzyme transport and metabolism]; Region: GshA; COG2918" /db_xref="CDD:442162" gene complement(5858158..5859456) /gene="argA" /locus_tag="PA5204" /db_xref="GeneID:879475" CDS complement(5858158..5859456) /gene="argA" /locus_tag="PA5204" /EC_number="2.3.1.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="N-acetylglutamate synthase" /protein_id="NP_253891.1" /db_xref="GeneID:879475" /translation="MPDYVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDL VLLHSLGARLVLVHGSRPQIEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIA IEARLSMDMAASPMQGARLRVAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLL DERSIVLLSPLGYSPTGEIFNLACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVR ELRPQQVPAHLQRLGNSYQAELLDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGN GTLVAQEQFEQLREAGIEDVGGLIELIRPLEEQGILVRRSREVLEREIEQFSIVEREG LIIACAALYPIADSEAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTT RTAHWFRERGFQPSSVERLPAARASLYNFQRNSQVFEKSL" misc_feature complement(5858161..5859456) /gene="argA" /locus_tag="PA5204" /note="N-acetylglutamate synthase; Validated; Region: PRK05279" /db_xref="CDD:235386" gene 5859793..5860494 /locus_tag="PA5205" /db_xref="GeneID:879574" CDS 5859793..5860494 /locus_tag="PA5205" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="multiple drug resistance protein MarC" /protein_id="NP_253892.1" /db_xref="GeneID:879574" /translation="MSEYFHHVLIGLLAVLPVANPLTSVSLLLGLGGSLPPAERNRQI FKASLYVALIMLVSFYGGSLVMQVFGISIPGLRIAGGLIVAYIGFTMLFPATTPDETE VQHDLLSDEEKITPHFRDLSFVPLALPGTAGPGTIALVVSSASTLQSTYGSIPLFIHL AAITVTLLTALIFWIALQSSGRIMKFLGESGIDAISRVVGFLLVAMGVQFVINGGFEL VAGHAALQSAAGVRQ" misc_feature 5859793..5860458 /locus_tag="PA5205" /note="MarC family NAAT transporter; Region: PRK10995" /db_xref="CDD:236814" protein_bind complement(5860400..5860412) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 5860417..5860429 /locus_tag="PA5205" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(5860467..5861621) /gene="argE" /locus_tag="PA5206" /db_xref="GeneID:879575" CDS complement(5860467..5861621) /gene="argE" /locus_tag="PA5206" /EC_number="3.5.1.16" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="acetylornithine deacetylase" /protein_id="NP_253893.1" /db_xref="GeneID:879575" /translation="MPLPSLKDQFGALIAASSVSCTQPELDQTNRPVVDLLASWLGDL GFRCEIREVSPGKFNLLASYGSGPGGLVLAGHTDTVPYDEALWSSDPLRLDERDGRWY GLGSCDMKGFFPLAIEALLPLLDQPFRQPLMILATCDEESSMAGARALAESGRPLGRA TVIGEPTNLRPIRLHKGVMMERIEILGQSGHSSDPNLGRSALEAMHATIGELMALRGE WQRAWNNPQFSVPQPTLNFGCIHGGDNPNRICGQCSLEFDLRPLPGMQPKQLREAIRQ RLRPLAERHQVSIDYQPLFPAVPPFEQAQDSELVRVAERLTGHRAEAVAFGTEAPYFQ RLGSETLVLGAGDIACAHQPDEHLELARIEPMVGVLRRLIQHYCLTPAAD" misc_feature complement(5860482..5861621) /gene="argE" /locus_tag="PA5206" /note="acetylornithine deacetylase; Provisional; Region: PRK05111" /db_xref="CDD:235346" gene complement(5861721..5862989) /locus_tag="PA5207" /db_xref="GeneID:879542" CDS complement(5861721..5862989) /locus_tag="PA5207" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="phosphate transporter" /protein_id="NP_253894.1" /db_xref="GeneID:879542" /translation="MSLIADHGFAFLVLACLFGFFMAWGVGANDVANAMGTSVGSRAL TIRQAILVAMVFEFCGAYFAGGEVTETIRSGIVDPQYMTPDLLVFGMLSALLAAGVWL LLATIKGWPVSTTHSIVGAIIGFASVGVSVHAVHWGAIGPIVASWVVTPVLSGLLAFA LFRSVQWLVLHAEDPFRSARRYVPLYMFLAGFMVALMTVGKGLKHVGLELSGLQTLGL ALLAGGLVMGLGIVLLLRIRPTGGADPRGGFASVERVFAVLMIFTACSMAFAHGANDV ANAIGPVAAVVAVVQAGGDLDLVSRSPVPSWVLLLGAVGIVIGLATYGYRVIATIGRE ITELTPSRGFAAELATASTVVGASAIGLPVSTTHTLVGAVLGIGMARGIGALNLRVIG SIFLSWVVTLPAGAVLAILFFLVLRALFGA" misc_feature complement(5861763..5862911) /locus_tag="PA5207" /note="Phosphate transporter family; Region: PHO4; pfam01384" /db_xref="CDD:460184" gene complement(5863034..5863711) /locus_tag="PA5208" /db_xref="GeneID:879543" CDS complement(5863034..5863711) /locus_tag="PA5208" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253895.1" /db_xref="GeneID:879543" /translation="MPTNPFISLFGRSPIGPMQQHIAKAHECAAGLLPFFRAVIAEDW AQVEQVQQDMVRLEQEADRLKKHVRMHLPKSLFLPVPRSDLLELLSVQDKVANRAKDI AGLMLGRRMRIPLPLQGQMLAYVQRSVDASAQALRVVNELNELLETGFGGRETSLVES MVEELEAIENDTDRIQVEVRRELFRLESELPPVDVMFLYQIIEWIGDVADRAQRVGNR LEQLLAR" misc_feature complement(5863037..5863678) /locus_tag="PA5208" /note="Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family [Inorganic ion transport and metabolism]; Region: YkaA; COG1392" /db_xref="CDD:441002" gene 5863825..5865189 /locus_tag="PA5209" /db_xref="GeneID:879544" CDS 5863825..5865189 /locus_tag="PA5209" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253896.1" /db_xref="GeneID:879544" /translation="MQKETEIKLRVSRATLEALQEHPLLKKRNKSGWERRELYNQYYD TPGRELARAKVALRMRRDGEQYIQTLKSRGQSVAGLSERNEWDWYLEKNKLDLKKLDD KCWPAALKDLDKKQLKPIFSTDFVRQRAEIAWGRGKARVVVEAALDLGKVVAGDNQEE ICELELELRQGDAAALLELAAELAADLPLMPCDISKAERGYRLFDPNSYEVDPPAQKL LAETPLDGAFAAIAWYLLGSSQRLAEQYRFNGHWRLLEDWLQHLQNLRTLLGSLGQAV PRASSRELREALDALLADWAPRIERGRDDETLRQQAPQLFRGELDETRWGLFSLNASR WLLAKAWTESRNERGNRQGSAALGKWLLRSLAEEAQATPLARAHQHPELLPDQAPRLQ RMLTWLRLARGVLDLPEADRLYGELAKLLELLRQPVDAERLAARAAQAHTVLTLKPWK ALMK" misc_feature 5863825..5864610 /locus_tag="PA5209" /note="Inorganic triphosphatase YgiF, contains CYTH and CHAD domains [Inorganic ion transport and metabolism]; Region: PPPi; COG3025" /db_xref="CDD:442261" gene 5865227..5867011 /locus_tag="PA5210" /db_xref="GeneID:879675" CDS 5865227..5867011 /locus_tag="PA5210" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="secretion pathway ATPase" /protein_id="NP_253897.1" /db_xref="GeneID:879675" /translation="MSVFATAAQDRLLDLGDLLRELVAQGRVGQEQAEQCLAIRRSAV RNQQHPLEFLAAQQVEDLKRPGRKLDLETLTQWLAEYAGQPYLRIDPLKIDVAAVTPL MSYAFAQRHGILAVALSPEEVTIASAQPFVQGWESNLVHVLKRPIKRVVANPADIQRY TVEFFRLARSVSGATSPDQKISGVGNFEQLLNLGAADQEPDANDAHIVTIVDWLFQYA FQQRASDIHIEPRREQGTVRFRIDGVLHNVYQFPPQVTMAVVSRLKSLGRMNVAEKRK PQDGRVKTKTPDGAEVELRLSTLPTAFGEKMVMRIFDPEVLLKSFDQLGFSADDLRRW QSMTSQPNGIILVTGPTGSGKTTTLYTTLKQLATDEVNVCTIEDPIEMIEPSFNQMQV QHNIDLTFASGVRALLRQDPDIIMVGEIRDLETAEMAIQAALTGHLVLSTLHTNDSPT AITRLLELGVPYYLIRATVLGVMAQRLVRTLCPHCKAPMQLADSDWHELTRPWSAPPP SGAHQAVGCLECRDTGYRGRAGVYEIMLLSDSLKELITADTDLVALRRQAYKEGTRSL RLSGAQKVAAGISTLEEVLRVTPQSEQK" misc_feature 5865335..5866996 /locus_tag="PA5210" /note="Type II secretory pathway ATPase GspE/PulE or T4P pilus assembly pathway ATPase PilB [Cell motility, Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: PulE; COG2804" /db_xref="CDD:442055" gene 5867233..5867685 /locus_tag="PA5211" /db_xref="GeneID:879676" CDS 5867233..5867685 /locus_tag="PA5211" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253898.1" /db_xref="GeneID:879676" /translation="MEILLLRLDFWDWLAFGTVLLLLEIFGAGGYLLRVGLTAACVGA LGALLPGLAWPWQVGLFVLLSGLVAALHRRRRRKAGSVEETPGLQRRGDDLFGRTFPL HRAIVGGLGELRVEDASWLVSGPDLPRGALVRVTGQDGALLHVEPAAP" misc_feature 5867254..5867679 /locus_tag="PA5211" /note="Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones]; Region: YbbJ; COG1585" /db_xref="CDD:441193" gene 5867817..5868146 /locus_tag="PA5212" /db_xref="GeneID:880605" CDS 5867817..5868146 /locus_tag="PA5212" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253899.1" /db_xref="GeneID:880605" /translation="MRSVKLAAATLVIAALPLGSAMADTFWRNIISSGATTASTYLTF RHDHKLIVAAQDDAGSYIASDGAIRGPYLEAALQKLRNDNPDLQASDMELASAILAGG EQSAVQQ" misc_feature 5867829..5868116 /locus_tag="PA5212" /note="Protein of unknown function (DUF2388); Region: DUF2388; cl23999" /db_xref="CDD:451651" gene complement(5868181..5871057) /gene="gcvP1" /locus_tag="PA5213" /db_xref="GeneID:880606" CDS complement(5868181..5871057) /gene="gcvP1" /locus_tag="PA5213" /EC_number="1.4.4.2" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycine dehydrogenase" /protein_id="NP_253900.1" /db_xref="GeneID:880606" /translation="MSQTPSLAQLQPADAFLRRHLGPDPAEQQAMLAFLGVSTRAELI VQTVPPAIRLNRPLELPAALDEQAALARLRGYAGLNQRWTSLIGMGYYGTVTPSVILR NVLENPGWYTAYTPYQPEIAQGRLEALLNFQQLTIDLTGLDLASASLLDEATAAAEAM ALARRVAKARSNRFFVDAHCHPQTVSVLRTRAEAFGFELVVDEPDNLAAHAVFGALLQ YPDSRGEIRDLRPLIEALHGQQALACVASDLLALLLLTPPGELGADVVLGSAQRFGVP MGYGGPHAAFFATREGYKRAMPGRIIGVSRDARGNPALRMALQTREQHIRREKANSNI CTAQVLLANIASLYAVYHGPQELKRIAQRVQRLTALLAAGLKSKGLRRLNRHFFDTLT YEVGERQAAILERARAARVNLRVVDDRRLALSLDETCDAATLATLFEIFLGAGHGLDV AHLDGGAVADGIPAVLQRTSAYLQHPVFNAHHSETEMLRYLRQLEGKDLALNQAMIPL GSCTMKLNASSEMIPITWPEFAELHPFVPREQAEGYRRMIDELEAWLRAITGFDAICM QPNSGAQGEYAGLLAIRRYHQSRGDSQRDICLIPASAHGTNPASAIMASMRVVIVECD PRGNVDLDDLRLKAAEAGDRLSCLMITYPSTHGVYEEGIGEICEVVHRHGGQVYMDGA NLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVKRHLAPFVANHPVIR VEGPNPLNDAVSATPWGSASILPISWMYIAMMGPQLADASEVAILSANYLANRLDGAF PVLYRGRNERVAHECILDLRPLKAQTGITEEDVAKRLMDYGFHAPTMSFPVPGTLMVE PTESESKAELDRFVEAMLSIRAEIGKVESGAWPAEDNPLKRAPHTLADVTGIWQRPYE IAEAVTPSEHARAFKYWPAVNRVDNVYGDRNLFCACVPLDDYRE" misc_feature complement(5868208..5871003) /gene="gcvP1" /locus_tag="PA5213" /note="glycine dehydrogenase (decarboxylating); Region: gcvP; TIGR00461" /db_xref="CDD:273089" protein_bind complement(5868744..5868756) /gene="gcvP1" /locus_tag="PA5213" /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind 5869310..5869322 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(5871231..5871620) /gene="gcvH1" /locus_tag="PA5214" /db_xref="GeneID:880637" CDS complement(5871231..5871620) /gene="gcvH1" /locus_tag="PA5214" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycine cleavage system protein H" /protein_id="NP_253901.1" /db_xref="GeneID:880637" /translation="MSNIPAELRYAQSHEWARLEADGSVTVGISDHAQEALGDVVFIE LPELGKTLAAGQEAGVVESVKAASDIYSPIGGEVIAINEALADTPEDVNNDPYVSWFF KLKPSNPAELDKLLDAAGYQAAVDAEG" misc_feature complement(5871240..5871620) /gene="gcvH1" /locus_tag="PA5214" /note="glycine cleavage system protein GcvH; Region: PRK01202" /db_xref="CDD:234918" misc_feature complement(5871426..5871428) /gene="gcvH1" /locus_tag="PA5214" /note="lipoyl attachment site [posttranslational modification]; other site" /db_xref="CDD:133457" gene complement(5871667..5872749) /gene="gcvT1" /locus_tag="PA5215" /db_xref="GeneID:880638" CDS complement(5871667..5872749) /gene="gcvT1" /locus_tag="PA5215" /EC_number="2.1.2.10" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycine cleavage system aminomethyltransferase T" /protein_id="NP_253902.1" /db_xref="GeneID:880638" /translation="MGLRTPLYELHVALGAKMVDFGGWDMPLHYGSQVEEHHQVRRDC GVFDVSHMTVVDVAGEQATAYLQHLLANDVARLGETGKALYSAMLNEEGGVVDDLIVY LTEHGYRVVVNASTRDKDIAWMQAQAAGFKVDLQERGDLAMLAIQGPNARVHSSELVS PARAALIRELKPFQGRAEGDWFIARTGYTGEDGLEIMLPAAEAPGFLNELVGAGISPA GLGARDTLRLEAGLNLYGQDMDESVSPLAANMGWTVAWEPVARDFVGRRALEAQKAAG DQPKLVGLVLEERGVLRAHQVVRVAGIGEGEITSGSFSPTLNKSIALARVPAATGDRA EVEIRGKWYPVRVVQPSFVRHGKPLI" misc_feature complement(5871676..5872749) /gene="gcvT1" /locus_tag="PA5215" /note="glycine cleavage system aminomethyltransferase GcvT; Region: gcvT; PRK00389" /db_xref="CDD:234742" gene complement(5872900..5874519) /locus_tag="PA5216" /db_xref="GeneID:880841" CDS complement(5872900..5874519) /locus_tag="PA5216" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="iron ABC transporter substrate-binding protein" /protein_id="NP_253903.1" /db_xref="GeneID:880841" /translation="MAHPAPRRWYPITFTVAALVLLPLSVLLLSWLEIDREIWSHLWD TQLPRLLGNTLTLVLGVGIGVTLLGVSLAWLTSLCEFPGRRWLDWALMLPFAIPAYVL AFVFVGLLDFAGPVQSLLREWFGSGLRLPRVRSTGGVILVLVLVFYPYVYLLARSAFI AQGKGLMEAARVLGLSPWQAFLRVALPMARPAIGAGLALAVMETLADFGAVSVFNFDT FTTAIYKTWYGFYSLSSAAQLASLLLLGVCLVLLGERHTRGRAKAASERPRGAPLYRL RGARALAASAWCGLVFLCAFVIPVAQLVVWFWRQGRFDLDERYWDLIGHTLTLGGIAA LATVAVALLLAFAVRLAPTRAIRGAVGLGNLGYALPGSVLAVSIMLAFSWLDNHWVIP LSSALGGAGKPLLLGSLFALLLAYLIRFMAVAYGPLESGLARIRPSLPEASRSLGVGG PLLFLRVYLPLLLPASLSAALLVFVDVLKEMPATLLMRPFGWDTLAVRIFEMTSEGEW ARASLPALTLVLVGLLPVVGLIRRSAHHSDR" misc_feature complement(5872975..5874411) /locus_tag="PA5216" /note="ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; Region: FbpB; COG1178" /db_xref="CDD:440791" gene complement(5874587..5875585) /locus_tag="PA5217" /db_xref="GeneID:880842" CDS complement(5874587..5875585) /locus_tag="PA5217" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="iron ABC transporter substrate-binding protein" /protein_id="NP_253904.1" /db_xref="GeneID:880842" /translation="MQASKALLAALALGITGLAQAADEVVVYSSRIDELIKPVFDAYT SKTGVKVKFITDKEAPLMARIKAEGANTPADLLLTVDAGNLWQAEQMGLLQPFKSATI ERNIPSQYRSSTDSWTGLSLRARTIVYSTERVKPEELSTYEALADKQWEGRLCLRTAK KVYNQSLTGTLIETHGAQKTEEILQGWVNNLATDVFADDNAVIQAVDAGQCDVGIVNT YYYGRLHKQNPNLRVKLFWPNQADRGVHVNLSGIGLTRHAPHPEAAKALVEWMTGPDA QALFAGINQEFPANPQVAPSAEVASWGSFKADSIPVEVAGKRQAEAIRLMDRAGWN" misc_feature complement(5874593..5875516) /locus_tag="PA5217" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" gene complement(5875653..5876567) /locus_tag="PA5218" /db_xref="GeneID:880843" CDS complement(5875653..5876567) /locus_tag="PA5218" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253905.1" /db_xref="GeneID:880843" /translation="MLDLRRLRCFAAVAETLHFGRAAQRLHMAQPPLTRQISALEEEL GFRLFDRSSRAVTLTAEGSLFLPYARALLDQLERTAGFARKLAQGLAGHLTLGYASSI ALSDLFTEAIRLFRERHPEVQLELLEGASAAQWAQIAEGGIDVGLGRLPPPEGQVGIE VLALGGEPLVVAVPNGDPLARQERIDLYDLRDRPLILFPLDYGSGLNELIERLYRKAG LALTRGPAGRQITSIIALVAAGQGVALVPRCSTALARAGVVYRPLAEPEALADFLVFT RRHGRSAAVEAFLAILGGLDAGETPRHI" misc_feature complement(5875692..5876564) /locus_tag="PA5218" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" gene 5876664..5877857 /locus_tag="PA5219" /db_xref="GeneID:882291" CDS 5876664..5877857 /locus_tag="PA5219" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253906.1" /db_xref="GeneID:882291" /translation="MNSSQGFPRLALFLCGCAAFLNLYTTQGIFDELAASFHISAHQS NWSITATTLAVALAAPFVGRLSGGRERSRVIAFAASLLCVPMLLAAHAGSFAAFLLWR FAEGMLIPLLFASSVAYIGERWSGGAVIELTSLYVAGTILGGFAGRFLTGLLTEEWDW RVAFRILAGLTLLIAVAIRALLPANSGRHAPAPGKRPLVSRELFRAPLLSSYAVGFCV LFSQVAMFTYIGIHLSRPPYSLDTAQLGSIYAVFLLALLVIPASGRLARTRPHRQLLL GASLLGVCGSLLTLAPGLPTILVGLALSATGVFLAQSTVNAFTASNAGTDKAGAVGLY LTCYYAGGSLGAVLPAPFWERWGWPGCLGLILLAQLLPLLLTRYGWSAPQAERAALRA SQGRP" misc_feature 5876691..5877746 /locus_tag="PA5219" /note="Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; Region: MFS_NepI_like; cd17324" /db_xref="CDD:340882" misc_feature order(5876718..5876723,5876730..5876735,5876742..5876744, 5876838..5876840,5876988..5876993,5876997..5877005, 5877012..5877014,5877072..5877074,5877081..5877086, 5877093..5877095,5877306..5877308,5877315..5877320, 5877327..5877335,5877342..5877344,5877426..5877428, 5877438..5877440,5877582..5877587,5877597..5877599, 5877609..5877611,5877654..5877656,5877663..5877668, 5877675..5877680,5877687..5877689) /locus_tag="PA5219" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340882" gene 5877896..5878717 /locus_tag="PA5220" /db_xref="GeneID:882292" CDS 5877896..5878717 /locus_tag="PA5220" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253907.1" /db_xref="GeneID:882292" /translation="MNHVITPHSKLLGVIEPVLNDMPAGTLRHALFRAFWDETASLLD IEDAFARVTARRQAVEPLRKFFASWSKTNNSAASVSGLANRLTLLARSEQGSAAADQL YRACGSLQRITDEDLGALGNTVHADLFYTMATTLCGDDRWLLRENCLPSAQAFKDWTD RQRLCERDLMQGLLTTLVHEVYTHGEVEYIHPLYKEWFSRDMGVPAERARATVAWVTV HTGGTESNHFAHATAAVNAFVEAMEIEVNEEAARNLFGLYLRNKAQVMRDCAALF" gene complement(5878754..5879971) /locus_tag="PA5221" /db_xref="GeneID:879231" CDS complement(5878754..5879971) /locus_tag="PA5221" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase" /protein_id="NP_253908.1" /db_xref="GeneID:879231" /translation="MHADLVIVGAGMVGSALALALEGSGLEVLLVDGGSLDVAPFKPE APYEPRVSALSEASRRILQRLHAWDGIVARRAEPYREMQVWDGSGTGRIGFSAASVHA EVLGHIVENRVVQDALLERLHDSTTGLLANARLEQMRHSGDDWLLTLADGRQLRAPLV VAADGANSAVRRLAGCATREWDYLHHAIVTSVRCENAHRATAWQRFTDDGPLAFLPLP DRGDEHWCSIVWSTTPEQAERLMALDEDGFRAALGEAFEQRLGAILHADRRLCIPLRQ RHAKRYVEPGLALVGDAAHTIHPLAGQGVNLGFLDAAVLSEVLLHALERGERLADERV LSRFERRRMPHNLGMMTAMEGFERLFQADRLPLRWLRNAGLRLVDGHHEAKALFVRQA LGLSGDLPMLARV" misc_feature complement(5878757..5879971) /locus_tag="PA5221" /note="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional; Region: PRK05714" /db_xref="CDD:168201" gene complement(5880000..5880482) /locus_tag="PA5222" /db_xref="GeneID:879232" CDS complement(5880000..5880482) /locus_tag="PA5222" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253909.1" /db_xref="GeneID:879232" /translation="MPVWSRARKARLLRFAMNLYPPFLGAGIRVRHIAGDFREVRVRM GLNRLNRNYVGTQFGGSLYAMTDPFFMLMLMENLGRDYVVWDKAANIEFVSPGKGPVH AHFSIDQKLLDEVRERTAGGEKYLPRLHAEVRDDAGTLVARVQKTLYVRLKPRLRNAA " misc_feature complement(5880033..5880458) /locus_tag="PA5222" /note="Domain of unknown function (DUF4442); Region: DUF4442; pfam14539" /db_xref="CDD:434027" misc_feature complement(order(5880195..5880206,5880306..5880311)) /locus_tag="PA5222" /note="active site 2 [active]" /db_xref="CDD:239524" misc_feature complement(order(5880222..5880230,5880270..5880272, 5880279..5880284,5880291..5880293)) /locus_tag="PA5222" /note="active site 1 [active]" /db_xref="CDD:239524" gene complement(5880487..5881671) /gene="ubiH" /locus_tag="PA5223" /db_xref="GeneID:882287" CDS complement(5880487..5881671) /gene="ubiH" /locus_tag="PA5223" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="2-octaprenyl-6-methoxyphenyl hydroxylase" /protein_id="NP_253910.1" /db_xref="GeneID:882287" /translation="MSKVNLAIIGGGLVGASLALALQAGARERGWSIVLIEPFAPGNA YQPSYDARSSALSYGSRQIYERLGLWPAIAERAEPILHIHVSDRGRFGATRLTAIEEG VPALGYVVENAWLGQCLWKALDPEVVRWHCPAEVKTLEAREGGYRLTLDDETQLDCEL AILADGGRSGLREQLGIAVEQTPYRQTALIANVSPSEAHLGQAFERFTPSGPMALLPL PDNRCALIWTRPGKDAERLRGLDDAAFLGELQAAFGYRLGAFRQVGARHCYPLHLVEA REQVRPHLVVLGNAAHSLHPIAGQGFNLSLRDTLALVDALLHDDAPLGEFAVLQRYLD GQRLDQQMTVGFSDRVTRLFSNDRALLGAGRNLGLLGLDLLPPAKRWFARQAMGLGAR PL" misc_feature complement(5880496..5881671) /gene="ubiH" /locus_tag="PA5223" /note="2-octaprenyl-6-methoxyphenyl hydroxylase; Validated; Region: PRK05732" /db_xref="CDD:235584" gene complement(5881679..5883013) /gene="pepP" /locus_tag="PA5224" /db_xref="GeneID:882288" CDS complement(5881679..5883013) /gene="pepP" /locus_tag="PA5224" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aminopeptidase" /protein_id="NP_253911.1" /db_xref="GeneID:882288" /translation="MIRIPKSEYARRRKALMAQMEPNSIAILPAAPMYIRNRDVEHVY RQDSDFQYLTGFPEPEAVMALIPGRAHGEYVLFCRERDPERELWDGLRAGQDGAIGQY GADDAFPIGDIDDILPGLIEGRDRVYYALGANPDFDRRLMDWINVIRSKARQGAQPPN EFVALDHLLHDQRLYKSANEVKVMRYAAEVSARAHIRAMEVCRPGLFEYHLEAELEYE FRKGGAKMPAYGSIVAAGRNACILHYRENDAAIKDGDLILIDAGCEIDCYASDITRTF PANGRFSPEQKAIYELVLEANMAAFDYIAPGRHWNEAHEATVRVITAGLVRLGLLEGD VDELIAHEAYKAFYMHRAGHWLGMDVHDVGEYRVGGEWRVLEPGMAMTVEPGIYIAPD NTTVAKKWRGIGVRIEDDVVVTRNGCEVLTNGVPKTVAEIEALMAAAKSEAA" misc_feature complement(5881694..5883004) /gene="pepP" /locus_tag="PA5224" /note="proline aminopeptidase P II; Provisional; Region: PRK10879" /db_xref="CDD:182804" gene complement(5883023..5883577) /locus_tag="PA5225" /db_xref="GeneID:878639" CDS complement(5883023..5883577) /locus_tag="PA5225" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253912.1" /db_xref="GeneID:878639" /translation="MSTQNSAYSAFSSLLAEAAMPVSPAELHGHLLGRVCAGAGFDEA AWQHAAAELLGGAPGERLKAALSGLLGMVRQDFSAGEVAVVMLLPDDETPLAQRTEAL GQWCQGFLAGFGLTAREGSLTGEAEEVLQDMAAIAQVQGQLEDSEDGETDYMEVMEYL RVAPLLLFAECGKPLEPAPKPSLH" misc_feature complement(5883026..5883577) /locus_tag="PA5225" /note="hypothetical protein; Reviewed; Region: PRK02166" /db_xref="CDD:167325" gene 5883664..5883975 /locus_tag="PA5226" /db_xref="GeneID:878640" CDS 5883664..5883975 /locus_tag="PA5226" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253913.1" /db_xref="GeneID:878640" /translation="MRPVAGAPARPGHWPRPGTILYSCPITPIPKREPMEDADLQLLT AKFDQLLQKLEQLKAENRLLRANEKSWREERAHLIEKNEMARHKVEAMILRLKALEQD T" misc_feature 5883778..5883972 /locus_tag="PA5226" /note="TIGR02449 family protein; Region: TIGR02449" /db_xref="CDD:131502" gene 5883972..5884286 /locus_tag="PA5227" /db_xref="GeneID:878641" CDS 5883972..5884286 /locus_tag="PA5227" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253914.1" /db_xref="GeneID:878641" /translation="MSQSNTLTVQILDKEYCINCPDDERANLESAARYLDGKMREIRS SGKVIGADRVAVMAALNITHDLLHRKERLDQESSSTRERVRELLDRVDRALANPADAG EA" misc_feature 5883975..5884268 /locus_tag="PA5227" /note="Cell division protein ZapA, inhibits GTPase activity of FtsZ [Cell cycle control, cell division, chromosome partitioning]; Region: ZapA; COG3027" /db_xref="CDD:442263" gene 5884320..5884502 /gene="ssrS" /locus_tag="PA5227.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /db_xref="GeneID:9793385" ncRNA 5884320..5884502 /ncRNA_class="other" /gene="ssrS" /locus_tag="PA5227.1" /product="6S RNA" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:9793385" gene 5884508..5885119 /locus_tag="PA5228" /db_xref="GeneID:879180" CDS 5884508..5885119 /locus_tag="PA5228" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="5-formyltetrahydrofolate cyclo-ligase" /protein_id="NP_253915.1" /db_xref="GeneID:879180" /translation="MIESQDLSRPALRRKLRQARRALSPLQQRLAARALYRQLAQHPL FRRARHIALYLPNDGEIDPRPLLRAAQKRGKATYLPVLAPWPRTRMVFQRVGSGERWT RNRFRISEPLADAGRQRKAWALDLVLLPLVGFDEQGGRLGMGGGFYDRSLAYLARRKN GHKPTLIGLAHECQKVDRLALASWDIPLAGTVTDAGWYVAGKR" misc_feature 5884529..5885098 /locus_tag="PA5228" /note="5-formyltetrahydrofolate cyclo-ligase [Coenzyme transport and metabolism]; Region: FAU1; COG0212" /db_xref="CDD:439982" gene 5885486..5885944 /locus_tag="PA5229" /db_xref="GeneID:879181" CDS 5885486..5885944 /locus_tag="PA5229" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253916.1" /db_xref="GeneID:879181" /translation="MPAYWLMKSEPDELSIRDLQRLGTARWDGVRNYQARNFIRSMNP GDLFFFYHSSCPQPGIAGIARIEGEAYPDPTALDPASPYHDPKASAGKNPWSARDVSF VEAFAEVVPLARLKAQDALANLALVQKGSRLSVMPVSAEEWQAILPLAKR" misc_feature 5885492..5885932 /locus_tag="PA5229" /note="EVE domains are putative RNA-binding domains that belong to the PUA superfamily; Region: EVE; cd21133" /db_xref="CDD:410978" gene complement(5885954..5887078) /locus_tag="PA5230" /db_xref="GeneID:880796" CDS complement(5885954..5887078) /locus_tag="PA5230" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_253917.1" /db_xref="GeneID:880796" /translation="MRSLANIFNLGIKEFRSLGRDYAMLALIVWAFTLGVYSSATGIP ETLHHAPIAVVDEDRSQLSSRIVNAFQPPYFRPPEMIGHAEMDRGMDVGLYTFTLDIP PDFQRDVLAGRKPSIQVNVDATQTGQAFSGAGYIQNIVATEVREFVSRYRAEPSMPAQ IEVRMEFNPNLTQAWFGGVMEVINQITMLSIILTGAALIREREHGTVEHLLVMPLSAF EIMMAKVWSMGLVVLVAAGLSLQWVVRGWLDVPISGSVGLFLLGAGLHLFATTSMGIF LGTVARSMPQLGLLTILVLLPLNILSGGTTPRESMPELVQNIMLAAPTTHFVSLAQAI LFRGAGFDIVWPQFAGIVVIGSAFFFGALWRFRRTISQMA" misc_feature complement(<5886227..5887078) /locus_tag="PA5230" /note="ABC-type Na+ efflux pump, permease component NatB [Energy production and conversion, Inorganic ion transport and metabolism]; Region: NatB; COG1668" /db_xref="CDD:441274" misc_feature complement(5885966..5886559) /locus_tag="PA5230" /note="ABC-type multidrug transport system, permease component [Defense mechanisms]; Region: YadH; COG0842" /db_xref="CDD:440604" gene complement(5887082..5889832) /locus_tag="PA5231" /db_xref="GeneID:880797" CDS complement(5887082..5889832) /locus_tag="PA5231" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein/permease" /protein_id="NP_253918.1" /db_xref="GeneID:880797" /translation="MTAGGSGVASLRGVSLRYGETRAVDDVSLEIPANRMVGLIGPDG VGKSSLLALLAGARKMQDGEIRVLDGDMRDRRHRRAVCPRIAYMPQGLGKNLYPTLSV FENVDFFGRLFGHDKAERERRIADLLQSTGLAPFAERPAGKLSGGMKQKLGLCCALIH DPDLLILDEPTTGVDPLSRNQFWELIGRIRAGREGMSVLVATAYMEEAERFDWLVAMD DGKVLATGTPQELRERTGTQSLESAFIALLPESKRAGHHRLVIPPRPQSEGAPRIAIE AEGLTCRFGDFVAVDHVSFRIERGEIFGFLGSNGCGKSTTMKMLTGLLPASEGTCALF GQPVDASDMATRRRVGYMSQAFSLYAELSVRQNLVLHARLFHLPADGIPARVGEMLRR FDLEKVADELPNDLPLGIRQRLSLAVAVIHKPEILILDEPTSGVDPVARDGFWELMVE LSRRDGVTIFISTHFMNEAQRCDRISLMHAGKVLASDTPDELVRQRGLPTLEATFIAY LEEAAGAAAPAQPAEAPAVAEQPGDGQERQAQRERFSPLRLFSYARREAMELRRDPIR LTLALLGTALLMFIIGYGINMDVEDLSWAVLDRDQTTTSQAYALNIAGSRYFVEHAPI TDPDDLDRRLRSGELSLAVEIPPNFGRDLKRGSDPAIGVWIDGAMPTRANTVLGYVQG LHTSYLADLSRQAGGAEASAAASTEVRYRYNPDVESLKAMVPAVIPLLLIMIPAMLTA LGVVREKELGSITNLYVTPVTRLEFLVGKQLPYVAMGMINFLLMLVLAIVVFRVPLKG SFLALTIGAFLYVVTSTGLGLFLSTFMRSQIAAVFGVAIATMIPAIQFSGLIHPVSSL EGAAAWIGKLYPTSHFLVVSRGAFSKSLGLSDLWAYYLPLAASIVVLTLLSVACLKKQ ED" misc_feature complement(5887088..5889811) /locus_tag="PA5231" /note="ribosome-associated ATPase/putative transporter RbbA; Region: ABC2_perm_RbbA; NF033858" /db_xref="CDD:468210" gene complement(5889829..5890902) /locus_tag="PA5232" /db_xref="GeneID:880798" CDS complement(5889829..5890902) /locus_tag="PA5232" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253919.1" /db_xref="GeneID:880798" /translation="MKQESKRWLSRALIVAALLGVGVLVWQVSRPTGLGEGFASGNGR IEATEVDVAAKLPGRVAEIKVDEGDFVKAGEIVARMDTQVLEAQLAQAQAQVRQAENA KLTATSLVAQRESEKSTAQAVVAQRQAELTAAQKRFTRTEALVKRNALPQQQLDDDRA TLQSAQAALSAARSQVISAQAAIEAGRSQVIEAQSAIEAAKASVARLQADIDDSLLKA PRNGRVQYRVAQPGEVLPAGGKLLNMVDLADVYMTFFLPSMQAGRVGLGQEVRLVIDA VPDYVIPAKVSYVASVAQFTPKTVETANEREKLMFRVKARLDPALLEKYITYVKTGVP GMAYLRLDPEVEWPANLQIKVPQ" misc_feature complement(5889877..5890902) /locus_tag="PA5232" /note="Multidrug resistance efflux pump EmrA [Defense mechanisms]; Region: EmrA; COG1566" /db_xref="CDD:441174" protein_bind complement(5891087..5891102) /experiment="ChIP-chip [PMID: 19682264]" /experiment="DNA-array expression analysis [PMID: 19682264]" /note="Transcription factor binding site for NP_250121.; Evidence of regulation for: PA5232" /bound_moiety="LasR" gene complement(5891109..5891528) /locus_tag="PA5233" /db_xref="GeneID:879662" CDS complement(5891109..5891528) /locus_tag="PA5233" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="flagellar basal body protein FliL" /protein_id="NP_253920.1" /db_xref="GeneID:879662" /translation="MRTPIALSLALCLSLFPSFASAEEAAPEGEGANKPVYVDLTPAL VGNYGSGPRLQYYKADIALQVADKDAATKVEHHEPLIRNQLIMLFAQQTDQSLGTVEA KESLRQEALKQVQQTLEQEEGKPLVTDLLFNNLIVQP" misc_feature complement(5891115..5891480) /locus_tag="PA5233" /note="flagellar basal body-associated protein FliL-like protein; Validated; Region: PRK05697" /db_xref="CDD:235565" gene 5891683..5892660 /locus_tag="PA5234" /db_xref="GeneID:879663" CDS 5891683..5892660 /locus_tag="PA5234" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_253921.1" /db_xref="GeneID:879663" /translation="MKAVLCKAFGPASSLVLEEIASPSPAKNEILLDVHAAGVNFPDT LIIEGKYQFKPPFPFSPGGEAAGVVAAVGEKVAHVRPGDRVMALTGWGSFAEQVKVPG YNVMPIPEGMDFASAAAFGMTYGTSMHALKQRANLQPGETLLVLGASGGVGLAAVEIG KAMGARVIAAASTPDKLAVAKAAGADELINYSEGSLREQLKALTGGQGVDVIYDPVGG ELFEEAFRSIAWNGRMLVVGFASGSIPSLPANLTLLKGASLVGVFWGSFAQRQPQDNA DNFRQLFAWHAEGKLKPLVSQRFPLERAGDAIDALGQRRAVGKVVVEVR" misc_feature 5891683..5892651 /locus_tag="PA5234" /note="Quinone oxidoreductase (QOR); Region: QOR1; cd08241" /db_xref="CDD:176203" misc_feature order(5891800..5891805,5892046..5892048,5892058..5892060, 5892121..5892123,5892130..5892138,5892193..5892198, 5892208..5892210,5892253..5892255,5892325..5892327, 5892391..5892396,5892400..5892405,5892466..5892474, 5892622..5892624,5892628..5892630,5892634..5892636) /locus_tag="PA5234" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176203" gene 5892910..5894256 /gene="glpT" /locus_tag="PA5235" /db_xref="GeneID:880661" CDS 5892910..5894256 /gene="glpT" /locus_tag="PA5235" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="sn-glycerol-3-phosphate transporter" /protein_id="NP_253922.1" /db_xref="GeneID:880661" /translation="MFGIFRPAPHQAPLPDAEVDSTYRRLRWQIFAGIFIGYAGYYLL RKNFSLAMPYLIEDGYSRGQLGVAMSAIAIAYGLSKFIMGLVSDRSNPRVFLPFGLLV SAAVMFIFGFAHWATSSVAIMFVLLFINGWAQGMGWPPSGRTMVHWWSQKERGSVVSV WNVAHNVGGGLIGPLFLLGLALFGDWRSAFYVPAIVAVGVAVFAYFAMRDTPQSCGLP PIEKHKDDYPEGYDEHHERELSTKEIFVTYVLRNKLLWYIALANVFVYLLRYGVLDWA PTYLKEAKHFNVDKSSWAYFFYEWAGIPGTLLCGWLSDKLFKGNRGATGVVFMILVTV GTLIYWLNPAGNPAIDMAALIMIGFLIYGPVMLIGLQALELAPKKAAGTAAGFTGLFG YLGGSVAANALVGYTVDHFGWDGGFKLLIGACLLAILFLCLTLRKPAVQAAPQQAG" misc_feature 5892910..5894238 /gene="glpT" /locus_tag="PA5235" /note="glycerol-3-phosphate transporter; Region: glpT; PRK11273" /db_xref="CDD:236889" gene complement(5894293..5895261) /locus_tag="PA5236" /db_xref="GeneID:880662" CDS complement(5894293..5895261) /locus_tag="PA5236" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="CDP-6-deoxy-delta-3,4-glucoseen reductase" /protein_id="NP_253923.1" /db_xref="GeneID:880662" /translation="MRIVLQPSGACLELLPGERILDGARRLGYDCPQSCRNGNCHICA ALLVEGRVRQNGEVRDHGELFTCLAEPLEDCVLHWDGVLAPGELPLRKLTCQLSFCEE VGGDVYRVGLRAPAGKPPRYHAGQYLLLERDGGDSAAFSLASAPHAGRDLELHILAKE DSAVALIAQLQRERLARIQLPFGDAHLAELPDGPLVLIAAGTGMSQMHSLIEHCRAAG FAHPVHLYWGVRRPEDFYRLPHWTEWEGLPNLFLHRVVSDLCGWEGRCGLLHEAVRED FADLSSLHVYASGSPAMVYATLDALVEAGMDAHQMRADVFAYAPRD" misc_feature complement(5894299..5895261) /locus_tag="PA5236" /note="CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated; Region: PRK07609" /db_xref="CDD:181058" gene complement(5895261..5896727) /locus_tag="PA5237" /db_xref="GeneID:880853" CDS complement(5895261..5896727) /locus_tag="PA5237" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="3-octaprenyl-4-hydroxybenzoate carboxy-lyase" /protein_id="NP_253924.1" /db_xref="GeneID:880853" /translation="MTFKDLRDFIAQLEQRGALKRIQVPISPVLEMTEVCDRTLRAKG PALLFEKPTGFDMPVLGNLFGTPERVALGMGAEDVGALREIGKLLAQLKEPEPPKGLK DAWAKLPMYRKVLSMAPKVLKDAPCQEVVEEGEDVDLGRLPVQTCWPGDVGPLITWGL TVTRGPNKERQNLGIYRQQVIGRNKVIMRWLSHRGGALDYREWCQKHPGQPYPVAVAL GADPATILGAVTPVPDTLSEYAFAGLLRGHRTELVKCRGSDLQVPASAEIVLEGVIHP GEMADEGPYGDHTGYYNEVDRFPVFTVERVTRRQKPIYHSTYTGRPPDEPAILGVALN EVFVPILQKQFPEIVDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMLGVWSFLRQFMYT KFVIVTDDDIDARDWNDVIWAITTRMDPKRDTVMIDNTPIDYLDFASPVSGLGSKMGL DATHKWPGETSREWGRAIVKDEAVTRRIDALWSSLGID" misc_feature complement(5895267..5896727) /locus_tag="PA5237" /note="3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Region: UbiD; cl00311" /db_xref="CDD:444825" gene complement(5896806..5898794) /locus_tag="PA5238" /db_xref="GeneID:880854" CDS complement(5896806..5898794) /locus_tag="PA5238" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="O-antigen acetylase" /protein_id="NP_253925.1" /db_xref="GeneID:880854" /translation="MSSLPYRRDIDGLRALAILSVVFYHLGLGGFTGGYVGVDVFLVI SGYLITSIIRRDRQAGRFSFVDFWARRARRILPALFVMMAVSLAAGWFLMEPRDYEQL GRSVRYQTMFASNILFWKQDGYFDAASEFKPLLHTWSLSVEEQFYILFPLLLAAISGR LLRWRLAILLAVLALSLAASVWAVSQRPGSAFFLLPMRAWELLAGAALALLPGASRGH SQWSLQLAATLGIAAILLPVFFYDSDTPFPGLAALPAVLGTALLIWANGAGDTWVRRL LGWQPLVWFGLISYSLYLWHWPLYVFVQYHALETLGLPARLGLLAASIGLAALSLYYV EAPFRERKLFAGRRQMLGAALCSLLLLGVIGQLVRHYDGVPSRLSEEALRYAKASKWR DGQTDCMFDKKALSQESICRFPAELAAERPLLVSWGDSHSAALSPLLRELATSRRLPI WQASLAGCPPLLGMLEKDTCLRFNQQMLEFVEQQRPGGVILAGRWDMYIYGDSQDGTR NILREPDDTPDSSIAEALLRQRLSGMIERLNAADVHVWLVKDVPLLPFKAPARLVRLS LSGEDVGRARFPFAEHAARVAYVNALFDALAEGNPRVSVLDPSSVLCDGLDCFAERDG WSLYMDNNHLSTQGAHELGPLFEPMLQSLDDSRIASQQ" misc_feature complement(5897736..5898794) /locus_tag="PA5238" /note="Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains [Cell wall/membrane/envelope biogenesis]; Region: OafA; COG1835" /db_xref="CDD:441440" misc_feature complement(5896851..5897606) /locus_tag="PA5238" /note="SGNH domain (fused to AT3 domains); Region: SGNH; pfam19040" /db_xref="CDD:436916" gene complement(5898865..5900124) /gene="rho" /locus_tag="PA5239" /db_xref="GeneID:880855" CDS complement(5898865..5900124) /gene="rho" /locus_tag="PA5239" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="transcription termination factor Rho" /protein_id="NP_253926.1" /db_xref="GeneID:880855" /translation="MNLTELKQKPIAELLEMSDAMGLENMARSRKQDIIFALLKKHAK SGEEISGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIIGKIR PPKEGERYFALLKVDSINFDRPENAKNKILFENLTPLFPNERMKMEAGNGSTEDLTGR VIDLCAPIGKGQRGLIVAPPKAGKTIMLQNIASNITRNNPECHLIVLLIDERPEEVTE MQRTVRGEVVASTFDEPPTRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNT VIPSSGKVLTGGVDAHALEKPKRFFGAARNIEEGGSLTILATALVETGSKMDEVIYEE FKGTGNMELPLDRKIAEKRVFPAININRSGTRREELLTSEDELQRMWILRKILHPMDE ISAIEFLIDKLKQTKTNDEFFDSMKRK" misc_feature complement(5898871..5900124) /gene="rho" /locus_tag="PA5239" /note="transcription termination factor Rho; Provisional; Region: rho; PRK09376" /db_xref="CDD:236490" gene complement(5900369..5900695) /gene="trxA" /locus_tag="PA5240" /db_xref="GeneID:877946" CDS complement(5900369..5900695) /gene="trxA" /locus_tag="PA5240" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="NP_253927.1" /db_xref="GeneID:877946" /translation="MSEHIVNVTDASFEQDVLKADGPVLVDYWAEWCGPCKMIAPVLD EVARDYQGKLKVCKLNIDENQDTPPKYGVRGIPTLMLFKDGNVEATKVGALSKSQLAA FLDANI" misc_feature complement(5900372..5900686) /gene="trxA" /locus_tag="PA5240" /note="Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family [Posttranslational modification, protein turnover, chaperones]; Region: CnoX; COG3118" /db_xref="CDD:442352" gene 5900879..5902399 /gene="ppx" /locus_tag="PA5241" /db_xref="GeneID:877947" CDS 5900879..5902399 /gene="ppx" /locus_tag="PA5241" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="exopolyphosphatase" /protein_id="NP_253928.1" /db_xref="GeneID:877947" /translation="MDLQSMPQKPAEAFPLIAALDLGSNSFHLCLAKANIHGEVRILE RLGEKVQLAAGLDEERNLSEEATQRGLDCLRRFAQFISGMPQGSVRVVATNALREARN RSDFIRRAEEVLGHPVEVISGREEARLIYLGVANSMPDSGGRRLVSDIGGGSTEFIIG QGFESELRESLQMGCVSYTQRYFRDGKITPARYAQAYTAARLELMGIENSLRRLGWQQ AVGASGTIRAVALAIKAGGHGNGEISPDGLAWLKRKVLKLGDVEKLDLEGIKPDRRTI FPAGLAILEAIFDALELEQMVHSEGALREGVLYDLVGRHQHEDVRERTISSLMQRYHV DPEQASRVEAKALKVLAEVGDAWELNGELHRDLLSWGARVHEIGLDIAHYHYHKHGAY LIEHSDLAGFSRQDQQMLSLLVRGHRRNIPADKLAEFAEEGDKLVRLCIVLRFAILFH HIRGTQEMPSVRLKAEPKSLSVTFPEGWLEANPLTQADFAQEAEWLKRVGYSLNVR" misc_feature 5900930..5901808 /gene="ppx" /locus_tag="PA5241" /note="nucleotide-binding domain (NBD) of Escherichia coli exopolyphosphatase (EcPPX), guanosine pentaphosphate phosphohydrolase (EcGppA) and similar proteins; Region: ASKHA_NBD_EcPPX-GppA-like; cd24053" /db_xref="CDD:466903" gene complement(5902386..5904596) /gene="ppk" /locus_tag="PA5242" /db_xref="GeneID:879700" CDS complement(5902386..5904596) /gene="ppk" /locus_tag="PA5242" /EC_number="2.7.4.1" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="polyphosphate kinase" /protein_id="NP_253929.1" /db_xref="GeneID:879700" /translation="MNTQQGLDEIERIAADETVVANVESEAEVKMAETIPVETPPAVV PSVDDSSLYIHRELSQLQFNIRVLEQALDESYPLLERLKFLLIFSSNLDEFFEIRIAG LKKQITFAREQAGADGLLPHQALARISELVHEQVSRQYRILNETLLPELAKHQIRFIR RRHWTLKIKTWVRRFFRDEIAPIITPIGLDPTHPFPLLVNKSLNFIVELEGMDAFGRD SGLAIIPAPRLLPRIIRLPEDVGGEGDNYVFLSSMIHAHADDLFPGMKVKGCYQFRLT RNADLSVDTEDVEDLARALRGELFSRRYGDAVRLEVVDTCPQNLTNYLLKQFGLSESE LYKVSGPVNLTRLFSVTGLESHPELQYPPFTPAIPRLLQKKENLFNVLSKLDVLLMHP FESFTPVIDLLRQAAKDPNVLAIKQTLYRSGANSEIVDALVEAARNGKEVTAVIELRA RFDEESNLQLASRLQQAGAVVIYGVVGFKTHAKMMLILRREDGELRRYAHLGTGNYHA GNARLYTDYSLLTADVALCEDLHKLFNQLIGMGKTLRMKKLLHAPFTLKKNLLEMINR EAAQAALGQPAHIMAKVNSLTDPKVIRALYKASQAGVRIDLVVRGMCCLRPGIPGVSH NIHVRSIIGRFLEHSRIYYFLNGGDEKLYLSSADWMERNLDMRVETCFPVEGKKLVQR VKKELETYLTDNTQAWVLQADGSYQRLSPTGNQNPRNTQATLLEKLAAPVLTAR" misc_feature complement(5902401..5904485) /gene="ppk" /locus_tag="PA5242" /note="polyphosphate kinase; Provisional; Region: PRK05443" /db_xref="CDD:235469" gene complement(5904614..5905627) /gene="hemB" /locus_tag="PA5243" /db_xref="GeneID:879701" CDS complement(5904614..5905627) /gene="hemB" /locus_tag="PA5243" /EC_number="4.2.1.24" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="delta-aminolevulinic acid dehydratase" /protein_id="NP_253930.1" /db_xref="GeneID:879701" /translation="MSFTPANRAYPYTRLRRNRRDDFSRRLVRENVLTVDDLILPVFV LDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAY NPEGIAQRATRALRERFPELGIITDVALDPFTTHGQDGILDDDGYVLNDVSIDVLVRQ ALSHAEAGAQVVAPSDMMDGRIGAIREALESAGHTNVRIMAYSAKYASAYYGPFRDAV GSASNLGKGNKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKDEF RAPTFVYQVSGEYAMHMGAIQNGWLAESVILESLTAFKRAGADGILTYFAKQAAEQLR RGR" misc_feature complement(5904620..5905594) /gene="hemB" /locus_tag="PA5243" /note="Delta-aminolevulinic acid dehydratase, porphobilinogen synthase [Coenzyme transport and metabolism]; Region: HemB; COG0113" /db_xref="CDD:439883" protein_bind 5905752..5905764 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 5905871..5906461 /locus_tag="PA5244" /db_xref="GeneID:880622" CDS 5905871..5906461 /locus_tag="PA5244" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253931.1" /db_xref="GeneID:880622" /translation="MMLQQFLQDFGYFALFLGTFFEGETILVLAGFLAFRGYMQLDTV ILTAFLGSYAGDQLWYFLGRRHGRRLLARKPRWQKLGDKALDHVRRHPDLWVLSFRFV YGLRTVMPVAIGLSGYPPARYLLLNGIGAIVWAAALGSAAYYFGSVLEGMLGNIKKYE LMVLGGLIVLGLLLWLWRRFKTPRGNGAGGNADKSE" misc_feature 5905877..5906353 /locus_tag="PA5244" /note="Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family [Cell wall/membrane/envelope biogenesis]; Region: DedA; COG0586" /db_xref="CDD:440351" gene 5906626..5907294 /locus_tag="PA5245" /db_xref="GeneID:880623" CDS 5906626..5907294 /locus_tag="PA5245" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="glutamine amidotransferase" /protein_id="NP_253932.1" /db_xref="GeneID:880623" /translation="MHKKVAVILSGCGVYDGAEIHESVITLLRLSQRGAEAQCFAPNI AQHHVVNHLTGEEMPESRNVLVESARIARGEVKDLREARAEDYDALIVPGGFGAAKNL SDFAINGAQCQVQPDVLALAKAFAEAGKPVGLICIAPAMAAKIYGAGVQCTIGNDADT ADALKQMGAEHIDAPVDEIVEDSARKLVTTPAYMLAQSIAEAASGINKLVDRVLELVD QDKA" misc_feature 5906632..5907279 /locus_tag="PA5245" /note="isoprenoid biosynthesis glyoxalase ElbB; Region: PRK11780" /db_xref="CDD:236980" misc_feature 5907031..5907033 /locus_tag="PA5245" /note="conserved cys residue [active]" /db_xref="CDD:153227" gene 5907390..5907863 /locus_tag="PA5246" /db_xref="GeneID:878652" CDS 5907390..5907863 /locus_tag="PA5246" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253933.1" /db_xref="GeneID:878652" /translation="MSETPSPALPDDVHQLVADFFQRIPFNRMLGIRVASLGRERVVL DLPMKDELIGNFVQGILHGGVISSLLDVTGGAMALIGALERHRELPGHERMARLSKLG TIDLRVDYLRPGRGRTFTAHAVPLRSGNKVAVVRSELHSDDGTLVAVGTGTYLCG" misc_feature 5907402..5907860 /locus_tag="PA5246" /note="thioesterase family protein; Region: PRK11688" /db_xref="CDD:183276" misc_feature order(5907570..5907572,5907696..5907698,5907717..5907728) /locus_tag="PA5246" /note="CoenzymeA binding site [chemical binding]; other site" /db_xref="CDD:239527" misc_feature order(5907573..5907575,5907579..5907581,5907588..5907590, 5907699..5907713,5907717..5907719) /locus_tag="PA5246" /note="subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:239527" misc_feature order(5907576..5907578,5907600..5907605,5907612..5907617, 5907696..5907698) /locus_tag="PA5246" /note="PHB binding site [active]" /db_xref="CDD:239527" gene complement(5907848..5908330) /locus_tag="PA5247" /db_xref="GeneID:878653" CDS complement(5907848..5908330) /locus_tag="PA5247" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253934.1" /db_xref="GeneID:878653" /translation="MRIWIDADACPKAAKELVCKFALKRKLEVWMVAGQPQVKPPFAC VRLVVVESGMDAADDYLVEQAEPGDLAICSDVPLADRLIKKQVAALDPRGREFDARNM GDKLAMRNLMADLRDQGQMGGGQAPYGERDRQAFANALDRLLTRLQREADLRASQPHR " misc_feature complement(5907881..5908330) /locus_tag="PA5247" /note="Uncharacterized conserved protein YaiI, UPF0178 family [Function unknown]; Region: YaiI; COG1671" /db_xref="CDD:441277" gene complement(5908397..5910298) /locus_tag="PA5248" /db_xref="GeneID:879647" CDS complement(5908397..5910298) /locus_tag="PA5248" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253935.1" /db_xref="GeneID:879647" /translation="MHPPKILLWLLPLVCAFSLGALADTAVDPSQALHLLSYLAADYP PTVADGKIVDPSEYQEQVEFVGNLQALVLTLPMRPERAELERGVASLRQAIEQRLPGR DVALQARNLEARVADIYQVVQTPAITPDPSRAAPIYAQQCAICHGDAGKGDGPAGIGL EPPPANLTDRQRLDHLSLYDLRNVIGLGVAGTDMPAFADQLDERQRWDLASYVAGLSA GSAQPDKAHAYPLATLATQTPAEVAEHDGEAAAESFRALRAHPPLEQRGPGQLIDYTA ATLDKSFAVYREGDRDQAYDLSVAAYLEGFELVESSLDNVDADLRRSTEKQLMAYRQA LRDGLPETQVAQQLELAKGKLAEAAKQLGGDSLSFSISFVSALLILLREGVEAILVLA AILAFLRNTGQESAVRGVHVGWGLAFVAGFATWALAAYVIDIGGAQRELMEGFTSLFA CVMVLWLGVWMHDRRHAAAWQDYIRSSLVGGGGRFGFAVLAFFSVYRELFEVILFYET LWLQAGPAGHNAVIGGAATAVVLLIGLAWVILRGSAKLPLGLFFSINAALLCALSVVF AGHGVIALQEAGVIGTRPVPFFDFDWLGIKADAYSLSAQAMALVAIALLYGRSRIVER RRAAANAAD" misc_feature complement(5909642..>5909992) /locus_tag="PA5248" /note="Cytochrome c, mono- and diheme variants [Energy production and conversion]; Region: CccA; COG2010" /db_xref="CDD:441613" misc_feature complement(5908439..5909185) /locus_tag="PA5248" /note="High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism]; Region: FTR1; COG0672" /db_xref="CDD:440436" gene complement(5910403..5911032) /locus_tag="PA5249" /db_xref="GeneID:879648" CDS complement(5910403..5911032) /locus_tag="PA5249" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253936.1" /db_xref="GeneID:879648" /translation="MLVSTWFAFFLACWAISLSPGAGAIASMSCGLQYGFARGYWNAL GLQIGLALQIAIVAAGVGALLATSALAFSLIKWFGVAYLVYLAVRQWQAPPQALSTDG ERPLGRPLTLVLRGFLVNASNPKAVIFMLAVLPQFIDPHQPLLAQYLIMGGTMIVVDL IVMAGYTGLAARVLRVLRSPRQQKLVNRTFASLFVGAAGLLATVRRAPL" misc_feature complement(5910415..5911032) /locus_tag="PA5249" /note="LysE type translocator; Region: LysE; cl00565" /db_xref="CDD:444980" gene complement(5911262..5912020) /locus_tag="PA5250" /db_xref="GeneID:879649" CDS complement(5911262..5912020) /locus_tag="PA5250" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253937.1" /db_xref="GeneID:879649" /translation="MEWLASPEIWVAFLTLTALEIVLGIDNIIFISILVGRLPPAQQP KARFFGLALAMGTRILLLLSITWVMRLTTDLFHLFGQGISGRDLILFFGGLFLLFKST MEIYHSLEGAEEEQKSGGKVHGFMGIIVQIAIIDIIFSLDSVITAVGLVQNVPVMVAA IVISVGVMMLAAGTISDFIEKHPSLKMLALSFLIVVGTVLVAESFEVHVPKGYVYFAM AFSLAVEALNIRLRGALARKRGEEPVKLRKGSPD" misc_feature complement(5911304..5912020) /locus_tag="PA5250" /note="Tellurite resistance membrane protein TerC [Inorganic ion transport and metabolism]; Region: TerC; COG0861" /db_xref="CDD:440622" gene complement(5912027..5912605) /locus_tag="PA5251" /db_xref="GeneID:880735" CDS complement(5912027..5912605) /locus_tag="PA5251" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253938.1" /db_xref="GeneID:880735" /translation="MEDLQVLTQTWSGPLVVAMQILLILLVAWLLQRLVRRTVTRIGE RYPVPPELLLPLRGGLRWLIMVSALIMVLERLGVSAEVLWTALTGFAAVAAVAFFAIW SVLSNLFCALLIFTVGPFRIGDRVELIDSADKPGVTGRVVAINLLYTTLEETLEDGSP GPLLQIPNSLFFQKAVRRWRGPGFSTPTKNGK" misc_feature complement(<5912066..5912596) /locus_tag="PA5251" /note="Small-conductance mechanosensitive channel [Cell wall/membrane/envelope biogenesis]; Region: MscS; COG0668" /db_xref="CDD:440432" gene complement(5912605..5914521) /locus_tag="PA5252" /db_xref="GeneID:880736" CDS complement(5912605..5914521) /locus_tag="PA5252" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_253939.1" /db_xref="GeneID:880736" /translation="MIRLLNLTLQRGPQRLLEAAELTLHAGQKAGLIGANGAGKSSLF ALLRGQLGQDAGDCLLPADWRIAHMRQEVDTLDRLAVDYVLDGDSRLREIQAALAVAE AAHDGSALARLHTELDNADGYTADARARKLLAGLGFSSEQMERRVGDFSGGWRMRLNL AQALMCPSDLLLLDEPTNHLDLDAILWLEEWLKGYPGTLVLISHDRDFLDAVVDHVVH LENRKLTLYRGGYSAFERTRAERLAQQQQAYEKQQAQRAHMESFIARFKAKATKARQA QSRIKALERLEELAPAHVDSPFNFSFRESDKISRPLLDLGEGRLGYGDKAVLEKVKLQ LVPGARIGLLGPNGAGKSTLIKTLAGDLPELGGRLLRGENLAIGYFAQHQLDSLDPQA SPLLHLQRIAPGEREQTLKDFLGGFDFRGVRVDEPVLNFSGGEKARLALALIAWQKPN LLLLDEPTNHLDLEMRLALTMALQEFSGAVLVVSHDRHLLKSTTDEFLLVADGRVVPF DGDLDDYARWLVDYRARKAPQAETAPGAPTERTDKRAQRQAAAALRQQLAPHKREADK LERELGGLHEKLAAIEARLGDSALYDVSRKDELRELLSEQSSLKVREGELEERWLEAL ETLEALQKELEASE" misc_feature complement(5912611..5914521) /locus_tag="PA5252" /note="putative ABC transporter ATP-binding protein; Provisional; Region: PRK10636" /db_xref="CDD:236729" gene 5914594..5915046 /locus_tag="PA5252a" /db_xref="GeneID:17373388" CDS 5914594..5915046 /locus_tag="PA5252a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719785.1" /db_xref="GeneID:17373388" /translation="MDVYARPGVETACLALQEQGADVCLLLVAAWLGRRGVSCSKERA QILENAARPWRETVIEPLRRLRCAWREAATHDACLAELREEMKAQELRAEREHLQRLA DLATAWLEGQEANRSADAWLQACSRDICTEAERRALLVLGSAALQTAP" misc_feature 5914597..5915028 /locus_tag="PA5252a" /note="Uncharacterized conserved protein, DUF2390 domain [Function unknown]; Region: COG5589" /db_xref="CDD:444328" gene complement(5915043..5916101) /gene="algP" /locus_tag="PA5253" /db_xref="GeneID:880806" CDS complement(5915043..5916101) /gene="algP" /locus_tag="PA5253" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alginate regulatory protein AlgP" /protein_id="NP_253940.1" /db_xref="GeneID:880806" /translation="MSANKKPVTTPLHLLQQLSHSLVEHLEGACKQALVDSEKLLAKL EKQRGKAQEKLHKARTKLQDAAKAGKTKAQAKARETISDLEEALDTLKARQADTRTYI VGLKRDVQESLKLAQGVGKVKEAAGKALESRKAKPATKPAAKAAAKPAVKTVAAKPAA KPAAKPAAKPAAKPAAKTAAAKPAAKPTAKPAAKPAAKPAAKTAAAKPAAKPAAKPVA KPAAKPAAKTAAAKPAAKPAAKPVAKPTAKPAAKTAAAKPAAKPAAKPAAKPAAKPVA KSAAAKPAAKPAAKPAAKPAAKPAAKPVAAKPAATKPATAPAAKPAATPSAPAAASSA ASATPAAGSNGAAPTSAS" misc_feature complement(5915703..5916098) /gene="algP" /locus_tag="PA5253" /note="AlgP family protein N-terminal domain; Region: AlgP_Nterm; NF038178" /db_xref="CDD:439492" gene 5916227..5916856 /locus_tag="PA5254" /db_xref="GeneID:880807" CDS 5916227..5916856 /locus_tag="PA5254" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="FkbP-type peptidyl-prolyl cis-trans isomerase" /protein_id="NP_253941.1" /db_xref="GeneID:880807" /translation="MPRRLFIGLFLLPLPLFAAPPKDELAYAVGARLGMRLQQEMPGL ELSELLLGLRQAYRGEALEIPPERIEQLLLQHENATTETPRTTPAEARFLANEKARFG VRELTGGVLVSELRRGQGNGIGAATQVHVRYRGLLADGQVFDQSESAEWFALDSVIEG WRTALRAMPVGARWRVVIPSAQAYGHEGAGDLIPPDAPLVFEIDLLGFR" misc_feature 5916569..5916850 /locus_tag="PA5254" /note="FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]; Region: FkpA; COG0545" /db_xref="CDD:440311" gene complement(5916918..5917400) /gene="algQ" /locus_tag="PA5255" /db_xref="GeneID:879719" CDS complement(5916918..5917400) /gene="algQ" /locus_tag="PA5255" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="anti-RNA polymerase sigma 70 factor" /protein_id="NP_253942.1" /db_xref="GeneID:879719" /translation="MLESCRNAQERWGGVHQLIDRWLHERQQLVQAFDALSGIQAPAP NAEELQHFCQLLLDYVSAGHFEVYEQLTAEGKAFGDQRGLELAKQIFPRLEAITESAL NFNDRCDNGDCREGACLIAELKVLRQQLHERFELEDCLIEVLHNAHSQSGAEGSAVPV " misc_feature complement(5916939..5917400) /gene="algQ" /locus_tag="PA5255" /note="sigma D regulator; Region: PRK11718" /db_xref="CDD:236962" gene complement(5917680..5918171) /gene="dsbH" /locus_tag="PA5256" /db_xref="GeneID:879720" CDS complement(5917680..5918171) /gene="dsbH" /locus_tag="PA5256" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="disulfide bond formation protein" /protein_id="NP_253943.1" /db_xref="GeneID:879720" /translation="MPLASPRQLFLLAFLACVAIMGGALYLEHVVGLEACPLCVVQRI FFILIGLTCLAGAIQGPGLRGRRIYSVLVFLLALGGGATAARQVWLQTVPLDQLPACL PSLDYMMQALPFQEVIRLVLHGTADCAQVSWTLFTLSIPEWSLLAFVAYLGFSIVQFL RRA" misc_feature complement(5917692..5918162) /gene="dsbH" /locus_tag="PA5256" /note="Disulfide bond formation protein DsbB [Posttranslational modification, protein turnover, chaperones]; Region: DsbB; COG1495" /db_xref="CDD:441104" gene complement(5918350..5919588) /locus_tag="PA5257" /db_xref="GeneID:879722" CDS complement(5918350..5919588) /locus_tag="PA5257" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253944.1" /db_xref="GeneID:879722" /translation="MRRIYLLVLAVVLVATLVGLAISEQAGYVLIAYKSFRYESSLWS FLALLAVVWLLVVLVRLVLRLLGSSGRVVNPWSRYNRRRRVQMAEHSGLRDLGEGNWP QALRHLRRAAEMGERPLMHYLGAARAANELERYDEADDLLNRAREREPDAQLLVGLTR AQLLINRGDYPQARNTLEELHGLQPQHRTVLRLMQQLYVTQHDWQALCVLLPELRKER VLKDSELRDLERRAWVASLQEAGERGLNEGETALQPLTQRWQNVPSALRADPAIVAGY AAQLLRLGAEEEAEEVLRHALKQGFDATLVQLYGQVRGRDPGKQLQAAEGWLKEHPND PGLLLTLGRLCLINKLWGKAREYLEASLSFQRSAETCAELGRLLAQLGEVERSNQLFQ EGLVLLDRRTPGLPVVVAGI" misc_feature complement(5919193..5919501) /locus_tag="PA5257" /note="HemY protein N-terminus; Region: HemY_N; pfam07219" /db_xref="CDD:429353" misc_feature complement(5918392..5919315) /locus_tag="PA5257" /note="Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY) [Function unknown]; Region: HemYx; COG3071" /db_xref="CDD:442305" misc_feature complement(5919145..5919237) /locus_tag="PA5257" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(5919052..5919135) /locus_tag="PA5257" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" gene complement(5919585..5920715) /locus_tag="PA5258" /db_xref="GeneID:879723" CDS complement(5919585..5920715) /locus_tag="PA5258" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253945.1" /db_xref="GeneID:879723" /translation="MSEAVTPQDDARTSTSTPSPVAPDASRRSGTATGLALLALLVGV AGLGAGGWSFWQVQQLQGTERDQLAQLEDARGKTESLAQRNQQLAARLDALPTADELE ARRRLVVELQGDQQHLSEQLKKVLGQSRQQWRLAEAEHLLRLASLRLSALQDVGSATE LVQGADDILRAQNDPGAYAARAKLAASLEALRALPEPDRTGLFVQLAALREQVNQLQP LTPTFKEGESGASNVAWGDGNSTWELWWEKISRYIRIDFNAGQDIRPLLAGEQLAQVR LTIGLALEQAQWAALNGKQEVYEQALKQAQDVLDGYFNVELADSRALKLRIDELAKQP VTVQVPDLAPALSALQAYVSRREAAGNLVPEAQAAPATEGRP" misc_feature complement(5920299..>5920529) /locus_tag="PA5258" /note="Protein of unknown function (DUF2730); Region: DUF2730; pfam10805" /db_xref="CDD:402439" misc_feature complement(5919636..5920331) /locus_tag="PA5258" /note="putative uroporphyrinogen-III C-methyltransferase; Region: HemX; pfam04375" /db_xref="CDD:427905" gene complement(5920742..5921497) /gene="hemD" /locus_tag="PA5259" /db_xref="GeneID:879724" CDS complement(5920742..5921497) /gene="hemD" /locus_tag="PA5259" /EC_number="4.2.1.75" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="uroporphyrinogen-III synthase" /protein_id="NP_253946.1" /db_xref="GeneID:879724" /translation="MSGWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETP EQRTLMLDLDRYCAVVVVSKPAARLGLERLDRYWPQPPQQTWCSVGAATAAILEAYGL DVTYPEQGDDSEALLALPAFQDSLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLP LYRRRAPDYPAGELLARVRAERLNGLVVSSGQGLQNLYQLAAADWPEIGRLPLFVPSP RVAEMARELGAQRVIDCRGASAPALLAALTSAA" misc_feature complement(5920787..5921497) /gene="hemD" /locus_tag="PA5259" /note="uroporphyrinogen-III synthase; Validated; Region: PRK05752" /db_xref="CDD:235590" misc_feature complement(order(5920919..5920933,5921006..5921008, 5921012..5921014,5921084..5921086,5921222..5921224, 5921303..5921311,5921468..5921470)) /gene="hemD" /locus_tag="PA5259" /note="active site" /db_xref="CDD:119440" gene complement(5921494..5922435) /gene="hemC" /locus_tag="PA5260" /db_xref="GeneID:877673" CDS complement(5921494..5922435) /gene="hemC" /locus_tag="PA5260" /EC_number="2.5.1.61" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="porphobilinogen deaminase" /protein_id="NP_253947.1" /db_xref="GeneID:877673" /translation="MSSREIRIATRQSALALWQAEYVKARLEQAHPGLTVTLLPMTSR GDKLLDAPLAKIGGKGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICERE DPRDAFVSNTYASLEQLPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLD AGEYDAIILAAAGLIRLGFESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEP LHHTDTALRVTAERALNKRLNGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEG RAPLAEAEALGVRVAEDLLEQGAEAILEAVYGEAGHP" misc_feature complement(5921515..5922429) /gene="hemC" /locus_tag="PA5260" /note="Porphobilinogen deaminase [Coenzyme transport and metabolism]; Region: HemC; COG0181" /db_xref="CDD:439951" gene complement(5922544..5923290) /gene="algR" /locus_tag="PA5261" /db_xref="GeneID:877674" CDS complement(5922544..5923290) /gene="algR" /locus_tag="PA5261" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alginate biosynthesis regulatory protein AlgR" /protein_id="NP_253948.1" /db_xref="GeneID:877674" /translation="MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLID SLKPDIVLLDIRMPGLDGLQVAARLCEREAPPAVIFCTAHDEFALEAFQVSAVGYLVK PVRSEDLAEALKKASRPNRVQLAALTKPPASGGSGPRSHISARTRKGIELIPLEEVIF FIADHKYVTLRHAQGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGH FQLYLKGLDGDALTVSRRHVAGVRRLMHQL" misc_feature complement(5922559..5923290) /gene="algR" /locus_tag="PA5261" /note="DNA-binding response regulator, LytR/AlgR family [Transcription, Signal transduction mechanisms]; Region: LytT; COG3279" /db_xref="CDD:442510" gene complement(5923295..5924371) /gene="algZ" /locus_tag="PA5262" /db_xref="GeneID:879635" CDS complement(5923295..5924371) /gene="algZ" /locus_tag="PA5262" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="alginate biosynthesis protein AlgZ/FimS" /protein_id="NP_253949.1" /db_xref="GeneID:879635" /translation="MPIRFKPGRSTRPAVQDDFFIPELCEAEALFTLVLLAELLVLVL VLAEPMTPSFNWVRLALASLFVQWIVLLSAALFCRLRPLLARLPVALAGSACCLLVVA LTLGCTAVAEHYQLGGELTRAGEVNLYLRHALIALIMSALVLRYFYLQSQWRRQQQAE LQARLESLQARIRPHFLFNSLNSIASLIELDPLKAEHAVLDLSDLFRASLAKPGTLVS WEEELALARRYLSIEQYRLGDRLQLDWQVHGVPANLPIPQLTLQPLLENALIYGIQPR VEGGLVQVEAVYREGVFQLCVSNPYDEALESPPSKGTRQALHNIDARLGALFGPKASL SVERRDGRHYTCLRYPCARLMQEA" misc_feature complement(5923319..>5923975) /gene="algZ" /locus_tag="PA5262" /note="Sensor histidine kinase YesM [Signal transduction mechanisms]; Region: YesM; COG2972" /db_xref="CDD:442211" gene 5924596..5925990 /gene="argH" /locus_tag="PA5263" /db_xref="GeneID:879636" CDS 5924596..5925990 /gene="argH" /locus_tag="PA5263" /EC_number="4.3.2.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="argininosuccinate lyase" /protein_id="NP_253950.1" /db_xref="GeneID:879636" /translation="MSVEKTNQSWGGRFSEPVDAFVARFTASVDFDKRLYRHDIMGSI AHATMLAKVGVLSDAERDAIVDGLQQIQAEIEAGSFDWRVDLEDVHMNIEARLTDRIG VTGKKLHTGRSRNDQVATDIRLWLRDEIDTILAEITRLQEGLLGLAEAEADTIMPGFT HLQTAQPVTFGHHLLAWFEMLGRDYERLVDCRKRVNRMPLGSAALAGTTYPIQREITC QLLGFDAVGGNSLDGVSDRDFAIEFCAAASLAMMHLSRFSEELVLWTSAQFQFIDLPD RFCTGSSIMPQKKNPDVPELVRGKSGRVFGALTGLLTLMKGQPLAYNKDNQEDKEPLF DAADTLRDSLRAFADMVPAIRPRREIMREAARRGFSTATDLADYLVRKGLPFRDCHEI VGHAVKYGVDSGKDLAEMSLDELRRFSEQIDADVFDVLTLEGSVNARDHIGGTAPNQV RAAVARGRKLLAQR" misc_feature 5924608..5925981 /gene="argH" /locus_tag="PA5263" /note="argininosuccinate lyase; Provisional; Region: PRK00855" /db_xref="CDD:179143" gene complement(5926134..5927105) /locus_tag="PA5264" /db_xref="GeneID:878187" CDS complement(5926134..5927105) /locus_tag="PA5264" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253951.1" /db_xref="GeneID:878187" /translation="MRWQFQNSSRIPYIIFTLRMLCYFFVWIALGIGIMGEATGEWRR DIQQLYTLVCSFFVVAVSVISMVAFLSNKKYLHVIQMSGFLFSIPLALYQYGTIFGTN GLQIAIWIGVATYFMGAVGFSAILWLYSKVFKQDGSEFNRLDGMLRFKRRFRRLFVAP FDEFDPVLQLLPSGYGSHDYALWLHHRYTDNKVCLATRVHSLGLDKVNALAFWDCLQR YMDVTQPLPDLPVLEPSRPLDPVTAEHDRHTGRDPHYWRQRTYQGWPAKERKELDRRL HEYPWQQQPCIVRARIDPGLSIEAYYRRQEAKGIFATPRADDFNDEH" gene complement(5927336..5930605) /locus_tag="PA5265" /db_xref="GeneID:878188" CDS complement(5927336..5930605) /locus_tag="PA5265" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253952.1" /db_xref="GeneID:878188" /translation="MSGFQDQSIDEGVRKRTAYQNDRRARLALNVERQDGGILQIPVA SDMLGHEEHERIQQNTFLAVMPLVRLPTLGKAGYGDQLPAGALPRAGRIYLFQDGKLW RELECDGKGNLFEVDLLQGRSQRADKRPALGKTQALILVPVLVKGQFVIPRYTMAYSE TPWPWSYIDWLEEDPQRVNRRCQQMASAWNASVANQHWKASIHQPALVIDHHAQGLRP RDFNVESALEDPAEFTPEFAAFREESLVCQLQRRQQELAPLLKQAPPSALPTLEAGED VLETLKLRGHPNLIGLMLDDSLFALRHAAAQARHCAAYLRSLNALLPHRPNGRYAQVL SNMLDGPLAKLRGEVDQAELDEAIFAEERQSCRIHLTQQVEHLVALLEGPLHPVLQDW THQCDEALLEPYSLMSEALAALNQLPDRCDALYSGTAYRALAAHVERVVSTVLQASHP LGAMLLAKDEGQLPEPVRRLQALRDSPRTPDPDAMGLSTLMLGASLLGEVDQPSAGKS LAYFLGDLLDVFGASVVEQLGRLSQGATQIQLDRLFAPTFNTLSALSVKMKGIRLLPD SQVPLDMVVVGVRGAGLRNGLTEVERQELRRKSYRRAIVQDGAGNPLAGTSPRDTGMS RANLRNVMVVAVPKDHPDLLAYTKFRTQLGTLTQVMENTRIVPTMMLGFAIYNLNVQV QAYSGFVDSGEKHRGTIGAVGAVIDLTAAGGSHAKLLFGPSTAKYLETPRISVAQISP RWARNLEVQTGSPKLGLLRGLGGAATLFGAGISVWDGYRALRQGDSDAAAAYGVAAVG GGLWGAYVLGWIVNPYALLAGAVLAIGGTVVANLLTDSDAETIVKKGPFGRQFAEAGL LDSLMGQDQRFAHLKDPQTAYRQLLGVLGHPRVFVHRLEDWRKLAPAAHRSVLQEAER GRQAVSRTALSCIDPKLQALEANDWAVVLSSPLLAMFENGQKAFRLVAQEFLSSLPID PGTLFGVKRYHRVPAGPAKLEALPLDAASVLYVLPASLPIPQLSPRARYSMRMTQGLK ISAQFELNADQPEQRLVLPQPSPKSWSAFTSANRYLPPDDLGPHAAPPYWLIENSEFN V" misc_feature complement(5930084..5930437) /locus_tag="PA5265" /note="Marker for type sIX effectors domain, clan I; Region: MIX_I; cd20705" /db_xref="CDD:410946" gene complement(5930602..5932677) /locus_tag="PA5266" /db_xref="GeneID:879578" CDS complement(5930602..5932677) /locus_tag="PA5266" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253953.1" /db_xref="GeneID:879578" /translation="MFAAANQTHFSLAIDGLALDLQVLSFSGREAISQPFAFDLELVG ERPVPDLESLLHKPAFLTLGPAGNGIHGLVRSAGQGDSGKRLTRYRITLVPQLAYLAQ RTNQRIFQHLTVPQIVGRVLEEHGILADAYRFQLGTRYPEREYCVQYDESDLQFVQRL CCEEGIHFHFQHSATAHLLVFGDDQTVFPRLAPVAYQQDSGLVADRPAVKRFGVRLET RTSHVTRRDYDFEKPRLTLESAARGEARPDLEDYDYPGRFVDRERGKHLARRALERQR SDYHLAEGRSDQPLLLSGHFLPLAAHPQAGWNDLWLLTEVIHEGRQPQVLEESIVSDA SASPDDFRQGYRNRFQATPWEAFFRPPSTPPKPRILGTQSAVVTGPKGEEIHCDRYGR VKVQFHWDREGQADDSSSCWLRVASGWAGRNYGAIAIPRVGMEVLVTFLEGDPDQPLV TGCLFHREHPVPYELPGHKTRSVFKSLSSPGGGGYNELRIEDRKGQEQIFVHAQRDWD ENIEHDQKIRVGHQRHDTVQANSYSEFKAEEHRTTHAERKVEVRASDHLTVANDQHLK IASGQFVEAGQEIHLSSGLKVVLEAGAELTLKGGGSFLKLDASGVTLSGVNVRVNSGG SPGNGSGAAPLLPGPPLDADAATAGQVLDNPARSRPERRGPEQLIVDVWGDPAQGSQV VLLPPESEA" misc_feature complement(5931106..5932650) /locus_tag="PA5266" /note="type VI secretion system Vgr family protein; Region: VI_Rhs_Vgr; TIGR03361" /db_xref="CDD:274542" gene complement(5932877..5933395) /gene="hcpB" /locus_tag="PA5267" /db_xref="GeneID:879579" CDS complement(5932877..5933395) /gene="hcpB" /locus_tag="PA5267" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="secreted protein Hcp" /protein_id="NP_253954.1" /db_xref="GeneID:879579" /translation="MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGF NHEVIIPRDPQSGQPTGQRVHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYRTS AAGTQEHYYTTVLEDAIIVDIKDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGT SGSDDWRSPVAG" misc_feature complement(5932889..5933392) /gene="hcpB" /locus_tag="PA5267" /note="type VI secretion system effector, Hcp1 family; Region: VI_effect_Hcp1; TIGR03344" /db_xref="CDD:213799" gene complement(5933688..5934668) /gene="corA" /locus_tag="PA5268" /db_xref="GeneID:878655" CDS complement(5933688..5934668) /gene="corA" /locus_tag="PA5268" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="magnesium/cobalt transporter" /protein_id="NP_253955.1" /db_xref="GeneID:878655" /translation="MITYYILSGDRLERRQHGDAQRGLPPGTLWIDLHHPTPEEERLL ESHLQVNIPTREEMAEIEDSSRFYEDGNVLYMTTSVVGGITEHRPSTEEVTFVLSEKW LITVRYADLRSFREFENRCIRQLDANRSSTQLFALMMDSLVDRIADVLEAVQGQLSSM SREIFAESTAQTRKPKTDLQQIIKHLGRSSSLLSKLNDSLLSINRMNSYFRQGCNGWL SEPAKVLAKTVERDVRSLDEYLAKMSTEINFLLDATLGLINIEQNSIIKVFSIAAVLF LPPTLVGTVYGMNFKDMPELDWSIGYPMALGMMVVSAILPYLWFKFKNWL" misc_feature complement(5933691..5934584) /gene="corA" /locus_tag="PA5268" /note="uncharacterized subgroup of the Escherichia coli Mg2+ transporter CorA_like subfamily; Region: EcCorA-like_u1; cd12837" /db_xref="CDD:213371" misc_feature complement(order(5933979..5933981,5934045..5934047, 5934054..5934059,5934234..5934236,5934243..5934245, 5934330..5934335,5934339..5934350,5934390..5934392, 5934432..5934434,5934438..5934440,5934474..5934476, 5934573..5934575)) /gene="corA" /locus_tag="PA5268" /note="Cl binding site [ion binding]; other site" /db_xref="CDD:213371" misc_feature complement(order(5933703..5933705,5933712..5933714, 5933748..5933753,5933760..5933765,5933799..5933822, 5933826..5933843,5933847..5933855,5933859..5933897, 5933901..5933924,5933931..5933939,5933943..5933948, 5933952..5933957,5933964..5933969,5933973..5933978, 5933985..5933990,5933994..5933999,5934030..5934035, 5934042..5934047,5934054..5934059,5934063..5934065, 5934075..5934080,5934084..5934089,5934096..5934101, 5934108..5934113,5934117..5934122,5934186..5934188, 5934195..5934200,5934204..5934209,5934216..5934218, 5934225..5934230,5934237..5934239,5934249..5934251, 5934261..5934263,5934270..5934272,5934309..5934311, 5934321..5934323,5934465..5934467,5934471..5934473, 5934489..5934494,5934501..5934503)) /gene="corA" /locus_tag="PA5268" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:213371" gene 5934770..5935045 /locus_tag="PA5269" /db_xref="GeneID:878656" CDS 5934770..5935045 /locus_tag="PA5269" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253956.1" /db_xref="GeneID:878656" /translation="MSEQDDNQEDGFAEEKLIQAIENQIESENPPAARAVFNKLTLVG YERDEALGMMAYVLAHEINAMLAADRAFDSAGYEHALRALPTLPDDE" gene 5935064..5935945 /locus_tag="PA5270" /db_xref="GeneID:877742" CDS 5935064..5935945 /locus_tag="PA5270" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253957.1" /db_xref="GeneID:877742" /translation="MPANSPRIHAVLFRQTPAALVERWRPLSVPPAFAERYRMRSWFH FLPICLLLALSGPAAAVPTEPLVLGAEDDWYPYTAYKDGRIQGMSADIVRAAFRAADT PVQLNPYPYSRCMKLALKGLIAGCFNTSPNPHILADYRLPRHPLFRAEIQLWARRDEA RPVNAEQALSGRKVAVTLGYEYGDGFDRRHDLVRIPVRKDYYGFLMLQRGRVDYALAY RNTARQLFSEHPELEGQFQPVATVHRPELYLSFSRRHPQAEHLLERFDLGMQRILASG EYQKILDGWSQAADATP" misc_feature 5935259..5935918 /locus_tag="PA5270" /note="ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:440596" gene 5935988..5936221 /locus_tag="PA5271" /db_xref="GeneID:877743" CDS 5935988..5936221 /locus_tag="PA5271" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253958.1" /db_xref="GeneID:877743" /translation="MAFTPELIDELELLALFNLNNTQEGLKVHHTADGKAVAAARRLH DKGLIDQPDGGYLTSLGLDAAEQAQGLLTILKG" misc_feature 5935988..5936215 /locus_tag="PA5271" /note="Family of unknown function (DUF5669); Region: DUF5669; pfam18918" /db_xref="CDD:465910" gene 5936370..5939222 /gene="cyaA" /locus_tag="PA5272" /db_xref="GeneID:877744" CDS 5936370..5939222 /gene="cyaA" /locus_tag="PA5272" /EC_number="4.6.1.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="adenylate cyclase" /protein_id="NP_253959.1" /db_xref="GeneID:877744" /translation="MNRHPALSLDLDDGIDRKVLGQLRQRFLAVNAGRLQRARQALSS RQERVLRLLPLLFHINHPLLPGYLSASTPAGLSGFEADDEVLAEAQRLARSFVYKPRR QEPAQQPIHGLFLMGSLGSLAQEEQSDLDLWVCHAPELEPGARQELRRKCALIEDWAR SQGSEVHCFLIDVARFGQDEREDRKEPGGDGNTQHFLLLDEFYRSAIWLGGRTPLWWL VPPAHERRYDEYCRTLLGKRFIRAEEVLDLGHLAHIPAREFIGAGLWQLSKAIDSPYK SLLKLLLTEAYASEHPRVRCVALRFKEQVFAGQLDLDELDPYVLVYRHLERYLREQQA PERLELVRRCLYLKVGRKLGGRQRQAQKGWQHLSMERLVAEWQWEPRRLALLDSRSQW KMRQVMEERRTVVNELTYSYRLLFQIARQQGADSGIDSRDLGLLGRRLYAAFERKAGK VENINPGIAPDLGEDVLTLVQLPADDGREQAQWAIFPGALGAHQWPDYAPLKRSLRLV ELLAWCHRNGVIDSATRLSLHPGQSDLGDAELDNLLGSLRQFLPVPLATVDDADLLQP RRLKSVLLLVNVGVDPLRHHSQMNLHMATGRTDVLGYAGVRDNLVLTLDQLSLNSWNE LTVRHYAGPQALPECLAEFLDAVREKPGSPPQPPELMVRCFCRNRAAAIAVRVEELFR ETYGQLLGGQPSRYLLQIRQQYHLLEMSPEAVSHESLPDLPSLLQHLGRERDGYSALK LDRHALEGEDLGLILSMGRPDCIQVFYRRDFDSAEISLLDERNALWRQRQALRDERSL LAPLQRFLQSLLYRRNALSLAEQVPAALDIRYYELLSNDGRVHVEPREAPEALAGPAL YELQALLERGERKRVQVTLYCDHQEFSELEYGAGLFKAVARHILAHRAESEPYPCYLT DLDLSRLFADEQPQTLHYLRYKSVLETALNQALLEQ" misc_feature 5936394..5939213 /gene="cyaA" /locus_tag="PA5272" /note="Adenylate cyclase, class I [Signal transduction mechanisms]; Region: CyaA; COG3072" /db_xref="CDD:442306" gene 5939263..5939976 /locus_tag="PA5273" /db_xref="GeneID:877819" CDS 5939263..5939976 /locus_tag="PA5273" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253960.1" /db_xref="GeneID:877819" /translation="MALLGITLLAGAAFVGGYLYRRGLDRRRYRFIQQFRLPPRVTQA VRERYPQLSEEQVQRVLGGLREYLLLCRAAGKRMVAMPSQVVDVAWHELILHTRLYQH VCRKGLGRFLHHTPAQAMRSPRQAQEGIQRAWKLACRREGIDPLNPTRLPLLFALDTE LAIADGFRYALNCAQRQDGGAAVYCASHIGCSSGCASDSGSTFGSDGQDSRHGCGGDS GGDGGSGCGGGGCGGGGGD" misc_feature 5939353..5939742 /locus_tag="PA5273" /note="Uncharacterized conserved protein [Function unknown]; Region: COG4278" /db_xref="CDD:443419" gene complement(5940020..5940424) /gene="rnk" /locus_tag="PA5274" /db_xref="GeneID:877820" CDS complement(5940020..5940424) /gene="rnk" /locus_tag="PA5274" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nucleoside diphosphate kinase regulator" /protein_id="NP_253961.1" /db_xref="GeneID:877820" /translation="MSTPPITITRLDLQRLERLLDGLDEFGPAAEALEAELSRAQVVG HDEIPPGVVTMNSTVRCREESSGKEYTLTLVYPEDVAGEGKVSILAPVGTALLGLTIG QTIDWPAPSGKTLKLTLLEIEYQPEAAGDYAR" misc_feature complement(5940023..5940424) /gene="rnk" /locus_tag="PA5274" /note="nucleoside diphosphate kinase regulator; Provisional; Region: PRK05753" /db_xref="CDD:180236" gene complement(5940747..5941082) /locus_tag="PA5275" /db_xref="GeneID:877753" CDS complement(5940747..5941082) /locus_tag="PA5275" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="frataxin-like protein" /protein_id="NP_253962.1" /db_xref="GeneID:877753" /translation="MSTMNEARFHDLVDALQQQVEDAFDDSDLDLDLENAGGVLTVRF ENGSQLILSRQAPLRQLWVAAKSGGFHFDYDEASGLWRHDGSQEPLGALLNRATLEQG GEDVEFPGL" misc_feature complement(5940756..5941073) /locus_tag="PA5275" /note="frataxin-like protein; Provisional; Region: cyaY; PRK00446" /db_xref="CDD:234765" misc_feature complement(order(5940987..5940989,5941005..5941010, 5941017..5941019,5941029..5941031,5941038..5941043, 5941065..5941067)) /locus_tag="PA5275" /note="putative iron binding site [ion binding]; other site" /db_xref="CDD:238280" gene 5941336..5941476 /gene="lppL" /locus_tag="PA5276" /db_xref="GeneID:877754" CDS 5941336..5941476 /gene="lppL" /locus_tag="PA5276" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="lipopeptide LppL" /protein_id="NP_253963.1" /db_xref="GeneID:877754" /translation="MKRLFLSFVALALLAGSIAACGQKGPLYLPDDEKAKKEHSKDRY GF" misc_feature 5941336..5941461 /gene="lppL" /locus_tag="PA5276" /note="Small periplasmic lipoprotein YifL (function unknown) [Function unknown]; Region: YifL; COG5567" /db_xref="CDD:444309" gene 5941487..5942734 /gene="lysA" /locus_tag="PA5277" /db_xref="GeneID:877749" CDS 5941487..5942734 /gene="lysA" /locus_tag="PA5277" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="diaminopimelate decarboxylase" /protein_id="NP_253964.1" /db_xref="GeneID:877749" /translation="MDTFSYRDAELFAEGVALSRIAERFGTPTYVYSRAHIEAQYRAY ADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFS GVGKTRDDMRRALEVGVHCFNVESGEELERLQRVAAELGVKAPVSLRVNPDVDAQTHP YISTGLKENKFGIAIDEAEAVYARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLL GLVDRLAGKGIGIRHLDLGGGLGVRYRDEQPPLAGDYIRAIRERLHGRDLTLVFEPGR SIVANAGVLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVQAVRPRDAAPRR YDLVGPICETGDFLAKDRDLALAEGDLLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGE QTHEVRRRETVQELYAGESLLPQ" misc_feature 5941487..5942722 /gene="lysA" /locus_tag="PA5277" /note="Diaminopimelate decarboxylase [Amino acid transport and metabolism]; Region: LysA; COG0019" /db_xref="CDD:439790" gene 5942745..5943575 /gene="dapF" /locus_tag="PA5278" /db_xref="GeneID:877750" CDS 5942745..5943575 /gene="dapF" /locus_tag="PA5278" /EC_number="5.1.1.7" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="diaminopimelate epimerase" /protein_id="NP_253965.1" /db_xref="GeneID:877750" /translation="MLLRFTKMHGLGNDFMVLDLVSQHAHVQPKHVKLWGDRNTGIGF DQLLIVEAPSSPDVDFRYRIFNADGSEVEQCGNGARCFARFVQDKRLTVKKSIRVETK GGIIELNIRPDGQVTVDMGPPRLAPAEIPFQAEREALSYEIEVNGQRVELAAVSMGNP HGVLRVENVDSAPVHSLGPQLEVHPRFPKKANIGFLQVLDPHHARLRVWERGVGETQA CGTGACAAAVAGIRQGWLQSPVQIDLPGGRLHIEWAGPGQPVMMTGPAVRVYEGQVRL " misc_feature 5942745..5943572 /gene="dapF" /locus_tag="PA5278" /note="Diaminopimelate epimerase [Amino acid transport and metabolism]; Region: DapF; COG0253" /db_xref="CDD:440023" gene 5943606..5944307 /locus_tag="PA5279" /db_xref="GeneID:878327" CDS 5943606..5944307 /locus_tag="PA5279" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253966.1" /db_xref="GeneID:878327" /translation="MTEKSQEPTAALDAEQVAAYLSQHPEFFVEHDELIPELRIPHQP GDAVSLVERQVRLLRERNIEMRHRLSQLMDVARENDRLFDKTRRLVLDLLDATSLEDV VSTVEDSLRHEFQVPYVSLILFSDSSVSVGRSVSSAEAHQAIGGLLSGGKTVCGVLRP HELAFLFGESDRDEIGSAAVVSLSFQGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVL ARVLPRFSSPLRSVR" misc_feature 5943624..5944286 /locus_tag="PA5279" /note="Protein of unknown function, DUF484; Region: DUF484; pfam04340" /db_xref="CDD:282228" gene 5944327..5945238 /gene="sss" /locus_tag="PA5280" /db_xref="GeneID:878328" CDS 5944327..5945238 /gene="sss" /locus_tag="PA5280" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="site-specific tyrosine recombinase XerC" /protein_id="NP_253967.1" /db_xref="GeneID:878328" /translation="MRADLDAFLEHLRSERQVSAHTLDGYRRDLLKILALAEKAGLSD WNALDTRSLRTFVARLHQQGQSSRSLARLLSATRGLYQYLLREGRCRHDPANGLSAPK SPRKLPRTLDADRALQLLDGAVEDDFIARRDQALLELFYSSGLRLSELVGLDLEWLDL KEGLVRVRGKGNKVRELPVGKAARQALEAWLPLRTQAAPEDGAVFIGRSGKRLTPRAI QLRVRQAGVRELGQHLHPHMLRHSFASHLLESSGDLRAVQELLGHADIATTQIYTHLD FQHLASVYDRAHPRAKRKGNADGGNDP" misc_feature 5944327..5945199 /gene="sss" /locus_tag="PA5280" /note="site-specific tyrosine recombinase XerC; Reviewed; Region: xerC; PRK00236" /db_xref="CDD:234698" misc_feature order(5944762..5944764,5945035..5945037,5945044..5945049, 5945140..5945142) /gene="sss" /locus_tag="PA5280" /note="active site" /db_xref="CDD:271179" gene 5945235..5945933 /locus_tag="PA5281" /db_xref="GeneID:877915" CDS 5945235..5945933 /locus_tag="PA5281" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_253968.1" /db_xref="GeneID:877915" /translation="MSSLRLVTFDLDDTLWDVAPVMNNAEALLREWLASNAARLGPVP IEHLWAIRTRLLDREPMLRHRLSELRRRILFHALLDAGYPQAEAESLAEAGFQVFLEA RHRVTLFPEVHPTLEILADRFTLGVLTNGNADVRRLGLADYFRFALCAEELGVGKPDP TPFREALKRAGVEASAAIHIGDHPSDDIAGARRAGMRAIWFNPSGKPWAGEEEPSAEI RSLAELPALLARLQ" misc_feature 5945247..5945918 /locus_tag="PA5281" /note="FMN and 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB, HAD superfamily (riboflavin biosynthesis) [Coenzyme transport and metabolism]; Region: YigB; COG1011" /db_xref="CDD:440635" gene complement(5945963..5947132) /locus_tag="PA5282" /db_xref="GeneID:877916" CDS complement(5945963..5947132) /locus_tag="PA5282" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_253969.1" /db_xref="GeneID:877916" /translation="MSNTRRHAACLAFGLCLITLAVNLQAPLYTAYAELSGYGAAATA SAFSGYVLGVLPVLLVLGGLSDRIGRKPPIVVALLLSMVATLVMALWPHLEALGVARL LLGVGTALASATGTAYMSELMAGGDSRTSANWVTASTSLGFGLGAALTSLFLLFRESL VPGSFWVQLGLACVALAAVAGLPDEAPRGRDTPMLRLPFFPAGSLPYGLSILLAWATV GLVIAVLPSLLAAHGLARWSGFSTFTVISCGLLFQPLARRMAPASATCLGLVILPPSY ALLAWGAIHGSLAAVLFGALGASSSCYGFTYLGGLSAVNVLAGAEKPRASAGYFLLAY LGFSLPVIFTGLIADRFGASTALLLFGVSLTLAAVAVAFSILRGVGRLKASASRA" misc_feature complement(5946014..5947102) /locus_tag="PA5282" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" misc_feature complement(order(5946122..5946124,5946131..5946133, 5946140..5946145,5946152..5946154,5946200..5946202, 5946212..5946214,5946224..5946229,5946386..5946388, 5946392..5946394,5946464..5946466,5946473..5946481, 5946488..5946493,5946500..5946502,5946704..5946706, 5946713..5946718,5946725..5946727,5946785..5946787, 5946794..5946802,5946806..5946811,5946959..5946961, 5947055..5947057,5947064..5947069,5947076..5947081)) /locus_tag="PA5282" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:349949" protein_bind 5946861..5946873 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 5947295..5948671 /locus_tag="PA5283" /db_xref="GeneID:877917" CDS 5947295..5948671 /locus_tag="PA5283" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253970.1" /db_xref="GeneID:877917" /translation="MHLRIDRNASEPLVQQIVAGVSGWIRGNRVRAGTRIPSIRQLAR ENQLSQSSVIEAYDRLVALGMLESRHGSGFFVAEAPAATTDLDSEWHEGAENAWGQFS GSSTKLKLGCGWIPDSWREVEELSYAIRQVARSELAGLFDYSTPLGLPALRQHIQKRL RLIDIHVDPEQILTTTGASHALDLLVRTLLKPGDVVVVENPGYYNLFNLLKFHGVKML GVPRTRHGPDTAALETILRAHKPKFLFTNSMYHNPTGTSLSPSVAHRVLQLAEQHDFH IVEDDIYADFQNGPSTRLATLDSLRRVIYLASFSKTLSCSLRVGYLIAGPELIRRLAD VKMYTSIGSQRFAECVVSTMLANGSYRKLVQRLRQRLTRQMAATLRVLGDNGWEVFAE PVGGMFVWARIGDYPFAELQAVATRLDVLLSPGSGFSPEGEESDWLRINIAYASDPRA LAFFEAFG" misc_feature 5947295..5948641 /locus_tag="PA5283" /note="DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; Region: ARO8; COG1167" /db_xref="CDD:440781" gene complement(5948696..5949610) /locus_tag="PA5284" /db_xref="GeneID:878097" CDS complement(5948696..5949610) /locus_tag="PA5284" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253971.1" /db_xref="GeneID:878097" /translation="MEFKTFRRTLLLAAVLFVPAGTSMAANLYAFGGRDIAVPSILPE GSVMSRYTFTPMQLCGKPSCDLIGVSLYNKGSVWDPVDGPDLNTNVPGLSVRLLLDGI PASSRFKGTFSQIAEIQLFRNSTPLSDGQFASGAFNSYFLITYKDGLIASGTSSIRLT GSVTTINATCQVADQTVKLQSIAAARLNGVGTYAAVTPFNLVVAGCPRGYNRVGYSLQ AVGGAVAEGSGVLPRLAGSTATGVSIRVTDEAGVPLRMGLSLPVTAYDKNTGGAYWIP MKASYVQTAEKITPGSVLAAMVILLDYQ" misc_feature complement(5948699..5949160) /locus_tag="PA5284" /note="Pilin (type 1 fimbrial protein) [Cell motility]; Region: FimA; COG3539" /db_xref="CDD:442760" gene complement(5950034..5950351) /locus_tag="PA5285" /db_xref="GeneID:878098" CDS complement(5950034..5950351) /locus_tag="PA5285" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253972.1" /db_xref="GeneID:878098" /translation="MSEEELEQDELDGADEDDGEELAAADDGEADSGDGDEAPAPGKK AKAAVVEEELPSVEAKQKERDALAKAMEEFLSRGGKVQEIEPNVVADPPKKPDSKYGS RPI" misc_feature complement(5950037..5950351) /locus_tag="PA5285" /note="transcriptional regulator SutA; Region: trans_reg_SutA; NF041490" /db_xref="CDD:469378" gene complement(5950429..5950854) /locus_tag="PA5286" /db_xref="GeneID:879508" CDS complement(5950429..5950854) /locus_tag="PA5286" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253973.1" /db_xref="GeneID:879508" /translation="MWQQTLITLRPRPRGFHLVTEEILDALPELRRCRVGLLHLLLQH TSASLTLNENADPAVRRDFERFFERLAPRGEVGYEHNDEGPDDLPAHFKASLLGCQLT LPIQSGGLALGTWQGIYLGEHRDRGGARRVLATWQGESV" misc_feature complement(5950450..5950845) /locus_tag="PA5286" /note="Thiamin phosphate synthase YjbQ, UPF0047 family [Coenzyme transport and metabolism]; Region: YjbQ; COG0432" /db_xref="CDD:440201" gene complement(5951115..5952443) /gene="amtB" /locus_tag="PA5287" /db_xref="GeneID:879509" CDS complement(5951115..5952443) /gene="amtB" /locus_tag="PA5287" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ammonium transporter" /protein_id="NP_253974.1" /db_xref="GeneID:879509" /translation="MTLRKIAGLGALLSLALPGVALAAEEPVLNSGDTAWMLISTALV LLMTIPGLALFYGGMVRAKNVLSIMMQCFAITGLITILWVVYGYSLAFDTAGMEKGVL NFNSFVGGLDKAFLSGLTADGLTSATALFPESVFITFQMTFAIITPALIVGAFAERMK FSAMLIFMAVWFTVVYAPIAHMVWSGDGALMWDWGVLDFAGGTVVHINAGIAGLVACL VLGKRKGYPTTPMAPHNLGYTLVGAAMLWIGWFGFNAGSAAAANGTAGMAMLVTQIAT AAAALAWMFAEWITHGKPSALGIASGVVAGLVAITPAAGTAGPMGALVIGLASGVICF FAATSLKRALKYDDSLDAFGVHAVGGIVGALLTGIFAAPSLGGFGSVEDIGAQFFVQF KGVAFTVVYTAVVTFVILKVLDLVMGLRVTEEEEAVGLDLALHNERGYNL" misc_feature complement(5951121..5952374) /gene="amtB" /locus_tag="PA5287" /note="Ammonia channel protein AmtB [Inorganic ion transport and metabolism]; Region: AmtB; COG0004" /db_xref="CDD:439775" gene complement(5952483..5952821) /gene="glnK" /locus_tag="PA5288" /db_xref="GeneID:878342" CDS complement(5952483..5952821) /gene="glnK" /locus_tag="PA5288" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="nitrogen regulatory protein P-II 2" /protein_id="NP_253975.1" /db_xref="GeneID:878342" /translation="MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTE LYRGAEYVVDFLPKVKIDVAIADDQLDRVIEAITKAANTGKIGDGKIFVVNLEQAIRI RTGETDTDAI" misc_feature complement(5952486..5952821) /gene="glnK" /locus_tag="PA5288" /note="Nitrogen regulatory protein PII [Signal transduction mechanisms, Amino acid transport and metabolism]; Region: GlnK; COG0347" /db_xref="CDD:440116" gene 5953261..5953521 /locus_tag="PA5289" /db_xref="GeneID:878343" CDS 5953261..5953521 /locus_tag="PA5289" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253976.1" /db_xref="GeneID:878343" /translation="MLPPKAVFEALSQQASRLFAGESPLPKAELESQFRALMQSAFSK LDLVSREEFDSQMLVLARTRARLEALEAKVAELESKLTPPAD" misc_feature 5953261..5953515 /locus_tag="PA5289" /note="Ubiquinone biosynthesis accessory factor UbiK [Coenzyme transport and metabolism]; Region: UbiK; COG2960" /db_xref="CDD:442200" gene 5953562..5955055 /locus_tag="PA5290" /db_xref="GeneID:878344" CDS 5953562..5955055 /locus_tag="PA5290" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253977.1" /db_xref="GeneID:878344" /translation="MSLAIVHSRAQVGVEAPCVSVEAHLANGLPSLTLVGLPETAVRE SKDRVRSALLNAGFDFPARRITLNLAPADLPKDGGRFDLAIALGILAASGQLPGTALD GLECLGELALSGAIRPVRGVLPAALAARDARRVLVVPKENAEEASLASGLTVFAVDHL LEIAGHLSGQAPLPPYQARGLLRAPFPYPDLAEVQGQAAAKRALLVAAAGAHNLLLSG PPGTGKTLLASRLPGLLPALDEDEALEVAAIHSVASHVPLRHWPQRPFRQPHHSASAP ALVGGGSRPQPGEITLAHQGVLFLDELPEFERKVLEVLREPLESGEIVIARANGRVRF PARFQLVAAMNPCPCGYLGDPSGRCRCTPEQVQRYRGKLSGPLLDRIDLHVSVLREST SLQPGHGETATAEVSERVGAARQRQLARQGCANAHLDLQAMHRNCALAEADRRWLEAA GERLELSLRALHRILKVARTLADLERIDAIERRHLAEALQYRAMTST" misc_feature 5953568..5955043 /locus_tag="PA5290" /note="Predicted Mg-chelatase, contains ChlI-like and ATPase domains, YifB family [Posttranslational modification, protein turnover, chaperones]; Region: YifB; COG0606" /db_xref="CDD:440371" gene 5955180..5957165 /locus_tag="PA5291" /db_xref="GeneID:877729" CDS 5955180..5957165 /locus_tag="PA5291" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="choline transporter" /protein_id="NP_253978.1" /db_xref="GeneID:877729" /translation="METPTTPRSTLNPPVFYTSAALILALVLFTVLLQEEAQSLFNHV QQWIITNASWFYVLAVALILISVVFLAVSRYGDIKLGPDHSRPDYRNTTWFAMLFSAG MGIGLMFFGVAEPVMHFTTPPVGEPNTVQAAKEAMKLTFFHWGLHAWAIYAIVALILA FFSYRHGLPLTLRSALYPLIGERIYGPIGHAVDIFAIIGTVFGVATSLGYGVLQINSG LHHLFGWPVNQTVQIALIAATCGLATLSVASGLDRGIRILSELNLSLAVILLLFVLVL GPTVFLLQTYVQNTGAYLSDIVNKTFNLYAYEPTDWIGGWTLLYWGWWLSWSPFVGLF IARISRGRTIREFVCGVLFVPAGFTLLWMTVFGDTAIHMVLQEGFTQLAEVVNQDSSV ALFAFLEHFPLGSVISLVAVLMVVVFFVTSADSGALVVDMLASSGKDHSPLWQRIFWS VLMGVVAIALLLADGLKALQTATIASALPFSIVLLASIWGLFKALHLDATKRGIRYQA LTFSRPTTRSGASEGDGWQRRLRNIAMFPRRSHVNRFITDVARPACEDVAAELRKQGY EVQVQDGEDGRVRLEVSHGGEVDFIYEVRPRAFTTPSFVMRDTEDSSESRKYFRAEVH LQEGGQDYDIMGWSRDGVIGDILDQYERHMHFLHVVR" misc_feature 5955186..5957162 /locus_tag="PA5291" /note="choline transport protein BetT; Provisional; Region: PRK09928; cl00569" /db_xref="CDD:469825" gene complement(5957208..5958257) /gene="pchP" /locus_tag="PA5292" /db_xref="GeneID:877730" CDS complement(5957208..5958257) /gene="pchP" /locus_tag="PA5292" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phosphorylcholine phosphatase" /protein_id="NP_253979.1" /db_xref="GeneID:877730" /translation="MTFAKGILAALALAAAVGQASATELEHWPAPAARQLNALIEANA NKGAYAVFDMDNTSYRYDLEESLLPYLEMKGVLTRDRLDPSLKLIPFKDQAGHKESLF SYYYRLCEIDDMVCYPWVAQVFSGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLD VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTT LLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWK RPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKAKYMEQINGMIKQHSAAQAKAGLPV TADRNWVIVTPEQIQ" misc_feature complement(<5957571..5958110) /gene="pchP" /locus_tag="PA5292" /note="Phosphoserine phosphatase [Amino acid transport and metabolism]; Region: SerB; COG0560" /db_xref="CDD:440326" protein_bind complement(5958334..5958347) /experiment="Beta-gal reporter assay [PMID: 20869215]" /experiment="Site directed mutagenesis [PMID: 20869215]" /note="Transcription factor binding site for NP_253152.; Evidence of regulation for: PA5292" /bound_moiety="RpoN" gene complement(5958408..5959325) /locus_tag="PA5293" /db_xref="GeneID:880555" CDS complement(5958408..5959325) /locus_tag="PA5293" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253980.1" /db_xref="GeneID:880555" /translation="MTRRLPPLYALRAFEAAARHASFTRAGEELAITQSAVSRHIRTL EEHFGCRLFERHGRQLQLTEPARLLLPGLRDGFDALERACTALRVDDATLRLKAPSTL TLRWLLPRLSRFRHLNPDIEVQLTSAWMDVDSVDFQREPFDCAVLLGSGQFSPEWETA ALFAEWLVPVCDPDEAVEPWTLQRLRDSELLHPTPDRRDWRRWLQRTGLGEEVSLKGG QVFDTLELGIVAAARGYGVSIGDLVMVAEDVAQGRIGLPWPVAVASGESYHLVWPRAR RGQERFQRLRDFLLAEVAAMRLPVVERLA" misc_feature complement(5958441..5959325) /locus_tag="PA5293" /note="DNA-binding transcriptional activator GcvA; Provisional; Region: PRK11139" /db_xref="CDD:182990" gene 5959474..5960940 /locus_tag="PA5294" /db_xref="GeneID:880556" CDS 5959474..5960940 /locus_tag="PA5294" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="multidrug efflux protein NorA" /protein_id="NP_253981.1" /db_xref="GeneID:880556" /translation="MSSPSLVELKAILRLAGPLIAAQLAYVAMVFTDTVMMGKLGPDA LAAGGLGAVSYAFVSTFCVGVVAAVGNLVAIRHGCDDAAGAAAAARSGLWVGAALALA AGLLLWNLRPLLLVFGQAPQTVDGAMQFLHSLTFALPGYMAFMVLRGFTSAIDRAGPV MAISVLGALANLALNYSFIEGLFGLPRLGLAGIGLVTALVMNCMPLLLALYIRLQPAY AEYSLLRGLGRPQRAMVEEILRLGLPIGGTYAVESGMFTVATLCMGIIGDHALAAHQI AIQAVYVAFMVPVGLSYATTYRIGQHFGAGRLLEARRAGRVGIGFGALCMLLFAGLFW WMPEAIIGLFLDRDAPANREVAAMAVSLLAIAAWFELFDGTQNVAMGAIRGLKDARTT FLVGLACYWLVGVPLACLLAFAAGWGAAGVWWGLAGGLACAAIGLTLAFEWKTARLLP KATASEASALNCRAAGRGAPSARLCPGNAPVPPTAAAD" misc_feature 5959474..5960865 /locus_tag="PA5294" /note="NorM family multidrug efflux MATE transporter; Region: PRK00187" /db_xref="CDD:166843" gene complement(5960852..5962528) /locus_tag="PA5295" /db_xref="GeneID:880557" CDS complement(5960852..5962528) /locus_tag="PA5295" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253982.1" /db_xref="GeneID:880557" /translation="MSAPAEPLRLLLLADTPDWAPLLGERLRALGPAFSLSIVTTWEG AATLFAAEPRGLLLATPACLPLGTPCPWPVILLLQQEPAQAPVGVVDWLAAEQLSEDS LRRCLRYARERLGLQATLQLLAEQDPLTGIANRQGFQTLLAARLSEFDGRGLVLGHLD LDNFRHVNDSLGHQGGDRLILQVVNRLRGFMENGDSLARLGSDEFALLLDTRRDPQRA ERVAERIVECLGEPYWIDGESLLLGCSLGLAHARADEGADPLMWHAHIAMQQAKSRQG CTFHVFDERINRGVRSLADLEAELRRALRRDELELHYQPRLCLDSGRIVGLEALVRWR HGERGLLTPSEFVPLAEESGLIVPLGYWVIARALRDMQWLNGRGLEPLHMAVNLSFRQ FQDSQLLPTLQRLIEEHGVDARWLEFELTETAVMRRSDQVLQTMQALGQLGVRFSLDD FGTGFSSFVHLNSLPITLLKIDRSFVGGMDQRAENFQLVRAMINLAHNLNLEVVAEGV ETLRQQEQLRDFGCDQVQGYWISPPLPLAELARFLGIGERSAHRGQPLGN" misc_feature complement(5960900..>5962315) /locus_tag="PA5295" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" gene 5962716..5964725 /gene="rep" /locus_tag="PA5296" /db_xref="GeneID:881391" CDS 5962716..5964725 /gene="rep" /locus_tag="PA5296" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase Rep" /protein_id="NP_253983.1" /db_xref="GeneID:881391" /translation="MSRLNPRQQEAVNYVGGPLLVLAGAGSGKTSVITRKIAYLVQQC GIRAQYIVAVTFTNKAAREMKERVGTLLRGGEGKGLTVSTFHNLGLNIIRKEHERLGY KPGFSIFDESDIKALLTDIMQKEYSGDDGVDEIKNYIGAWKNDLILPEEALEKARNPK EQTAAIVYLHYQRTLRAYNAVDFDDLILQPVKLFQEHPDVLQKWQNKVRYMLVDEYQD TNASQYLLVKLLVKDRAQFTVVGDDDQSIYAWRGARPENLMQLKEDFPSLKVVMLEQN YRSTSRILKCANVLIANNPHVFEKQLWSEMGHGDPIRVIRCRNEDAEAERIAMEILTL HLRTERPYSEFAILYRGNHQAKLMELKLQHHQIPYRLSGGTSFFGRQEVKDLMSYFRL LVNPDDDNAFLRVINVPRREIGSATLEKLGNYATQRKISMYAACDEMGLAEHLDSRFH ERLQRFKRWMDGIRRQCAENEPIAVLRSMVMDIDYENWLRQNASSDKVAEFRMSNVWF LIEALKNTLERDEEGDMTIEQAIAKLVLRDMLERQQEEEEGAEGVQMMTLHASKGLEF PYVFIMGMEEEILPHRSSIEADTVEEERRLAYVGITRARQNLAMTFAAKRKQYGEIID CSPSRFLDELPPEDLEWEGMEDAPQEVKAAKGNAALADIRAMLKR" misc_feature 5962722..5964707 /gene="rep" /locus_tag="PA5296" /note="ATP-dependent DNA helicase Rep; Region: rep; TIGR01074" /db_xref="CDD:130146" gene 5964859..5966577 /gene="poxB" /locus_tag="PA5297" /db_xref="GeneID:881392" CDS 5964859..5966577 /gene="poxB" /locus_tag="PA5297" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase" /protein_id="NP_253984.1" /db_xref="GeneID:881392" /translation="MSSKKVAEIVVETLEAAGVRHCYGIVGDTLNHVTDAIHRSQIQW VHVRHEEAAAFAAGAESYISGRLTACAGSCGPGSLHFINGVYEAQRNRAPMVLIASQI VTPQLGMEFPQEVDFKAVYASCSVFCEQVHSPEQARRVVALACQAALNRRGVAVVILP ADISQATVKDDLPFSVHFPQPVLRPSDAELQDVARLLAHGKKIGIYAGSGCQGAHDLL VALADRLKAPIAHTSRAKDFVEYDNPFNMGMTGMLGIESGFHMMTECDTLLLLGADFA WAQFYPQKATLIQVDRDGSHLGRRHPIDLGVVGDVIPTLEALLPLLEAREERSFLDEC LEHRERSLRTLEKEEQAGKGELIHPQHLVSLLDQHASEDALFTADGGSAMVWLLRHIH SNGKRRTLTSLVHGTMANAMPQALGLKKAYPERQVISISGDGGLAMLLGDLLTAIQEK LPIKVVVLNNASLNFVELEQKVEGLLDNYTDLLNPDFARLAEVIGFHGRKVTRSEELE AAVQEFLAQPGPALLDVHTNPAELVMPPKIEFGQVADTALYAAKAVLSGRFKDVETLL VNNLLK" misc_feature 5964865..5966574 /gene="poxB" /locus_tag="PA5297" /note="ubiquinone-dependent pyruvate dehydrogenase; Region: PRK09124" /db_xref="CDD:181661" gene 5966706..5967278 /locus_tag="PA5298" /db_xref="GeneID:878159" CDS 5966706..5967278 /locus_tag="PA5298" /EC_number="2.4.2.22" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="xanthine phosphoribosyltransferase" /protein_id="NP_253985.1" /db_xref="GeneID:878159" /translation="MDILKDKIRSEGIVLSEHVLKVDAFLNHQIDPQLMQQVGHAFAT RFRDQGITKIVTIEASGIAPAVMAGLELGVPVIFARKYQSLTLKDNLYISKVFSFTKQ TESTIAISAKHLNAHDHVLVIDDFLANGHAAKALIDLIGQAGASIAGLGIVIEKSFQD GRALLESEGYRVESLARVKSLAGGQVEFLD" misc_feature 5966706..5967272 /locus_tag="PA5298" /note="xanthine phosphoribosyltransferase; Validated; Region: PRK09219" /db_xref="CDD:181705" misc_feature order(5966877..5966879,5966883..5966885,5967075..5967083, 5967087..5967101,5967171..5967173) /locus_tag="PA5298" /note="active site" /db_xref="CDD:206754" gene complement(5967286..5969145) /locus_tag="PA5299" /db_xref="GeneID:878160" CDS complement(5967286..5969145) /locus_tag="PA5299" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253986.1" /db_xref="GeneID:878160" /translation="MGLPLGLGKPNRLVNALYQRLRTLPERQLTLYTALSLGRPAAGG DLQRRFLEPFAERVFADYPELDYLHALRRDELPANIRVEEFYLQPGSLLDSAPAQQHY ISCNYSHVARDINAKGVNAVAQLVARHPERPGKLSLACNPDITLDLLPMLEKRRAAGE TIVAIGVVHDDLPYLPGDAEVEESVFDLLIDAPAESSRLFSTPNMPVNLQDHCIGLHA SALVRDGGTLQIGIGSMGDALTAALLLRQRDNATYRALIDELGVRARWAETIERDGGL EPFRRGLYGCSEMFVPGLLALAEAGVLSRRVYPDEARQRAAERGEAPVEGGVWLHGGF FLGPLAFYRRLREMSLEERAGIGMTGIGFVNNLYRQEELKRLQRRDARFINSAFTVTL LGAGVADQLEDGRVLSGVGGQYNFVAQAHELEGARSILMLRSWRESGGEVSSNIVWQY AHTTIPRHLRDMVVTEYGIADLRGKNDAEVIAALLAIADSRFQQALAEQAQSAGKLPK DFVLPERYRNNTPERLQALHQAHAAALPEFPLGSDFDEVEQDLLRALGWLKRKLKLSE ILELGKATLDAPEPEAYPAHLRRMDLDDPQGLREELYQRLLLAGLRASQEERG" misc_feature complement(5967634..5969142) /locus_tag="PA5299" /note="Propionyl CoA:succinate CoA transferase [Energy production and conversion]; Region: ACH1; COG0427" /db_xref="CDD:440196" misc_feature complement(5967646..5968137) /locus_tag="PA5299" /note="Acetyl-CoA hydrolase/transferase C-terminal domain; Region: AcetylCoA_hyd_C; pfam13336" /db_xref="CDD:433126" gene complement(5969355..5969765) /gene="cycB" /locus_tag="PA5300" /db_xref="GeneID:878483" CDS complement(5969355..5969765) /gene="cycB" /locus_tag="PA5300" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome C5" /protein_id="NP_253987.1" /db_xref="GeneID:878483" /translation="MLAAQAAVLALWAVSAQATTTDDAIAKRLEPVGKVCVQGKECEG VGAVAAAAGGGGARSGEDIVGKTCNTCHGTGLLGAPKVGDKAEWGKRAKEQGGLDGLL AKAISGINAMPPKGTCADCSDDELKAAIKHMSGL" misc_feature complement(5969361..5969696) /gene="cycB" /locus_tag="PA5300" /note="Cytochrome c5 [Energy production and conversion]; Region: CytC5; COG3245" /db_xref="CDD:442476" gene complement(5969987..5970535) /locus_tag="PA5301" /db_xref="GeneID:878484" CDS complement(5969987..5970535) /locus_tag="PA5301" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_253988.1" /db_xref="GeneID:878484" /translation="MDVGARLQTIRKLKGLSQRELAKRAGVTNSTISMIEKNSVSPSI SSLKKVLGGIPMSLVEFFSLDLEQDSHTQVVYKADELIDISSGAVSMRLVGKAHPSRA IAFLDETYPPGSDTGEEMLNHEGEEAGVLVDGRLELTVGSETYVLERGDSYYFESNKP HRFRNPYDVPARLISATTPANF" misc_feature complement(5969990..5970526) /locus_tag="PA5301" /note="HTH-type transcriptional regulator PuuR; Region: PRK09943" /db_xref="CDD:182158" gene complement(5970686..5971759) /gene="dadX" /locus_tag="PA5302" /db_xref="GeneID:878055" CDS complement(5970686..5971759) /gene="dadX" /locus_tag="PA5302" /EC_number="5.1.1.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="alanine racemase" /protein_id="NP_253989.1" /db_xref="GeneID:878055" /translation="MRPARALIDLQALRHNYRLAREATGARALAVIKADAYGHGAVRC AEALAAEADGFAVACIEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCA WQLEAIERASLARPLNVWLKMDSGMHRVGFFPEDFSAAHERLRASGKVAKIVMMSHFS RADELDCPRTEEQLAAFAAASQGLEGEISLRNSPAVLGWPKVPSDWVRPGILLYGATP FERAHPLADRLRPVMTLESKVISVRDLPAGEPVGYGARYSTERSQRIGVVAMGYADGY PRHAADGTLVFIDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAA QFGSIPYQLLCNLKRVPRVYSGA" misc_feature complement(5970695..5971759) /gene="dadX" /locus_tag="PA5302" /note="catabolic alanine racemase; Region: dadX; PRK03646" /db_xref="CDD:179622" misc_feature complement(order(5970737..5970739,5971127..5971138, 5971178..5971186,5971286..5971288,5971292..5971294, 5971373..5971375,5971394..5971396,5971526..5971528, 5971649..5971651,5971661..5971663,5971667..5971669)) /gene="dadX" /locus_tag="PA5302" /note="active site" /db_xref="CDD:143500" misc_feature complement(order(5970737..5970739,5971127..5971132, 5971136..5971138,5971181..5971186,5971286..5971288, 5971526..5971528,5971649..5971651,5971661..5971663, 5971667..5971669)) /gene="dadX" /locus_tag="PA5302" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143500" misc_feature complement(order(5970737..5970739,5971286..5971288, 5971373..5971375,5971649..5971651,5971661..5971663)) /gene="dadX" /locus_tag="PA5302" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:143500" misc_feature complement(order(5971001..5971003,5971661..5971663)) /gene="dadX" /locus_tag="PA5302" /note="catalytic residues [active]" /db_xref="CDD:143500" misc_feature complement(order(5970713..5970715,5970719..5970721, 5970734..5970739,5970743..5970745,5970854..5970856, 5970860..5970862,5970926..5970928,5970944..5970946, 5970959..5970961,5970998..5971006,5971010..5971015, 5971031..5971033,5971040..5971042)) /gene="dadX" /locus_tag="PA5302" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143500" gene complement(5971850..5972203) /locus_tag="PA5303" /db_xref="GeneID:878056" CDS complement(5971850..5972203) /locus_tag="PA5303" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253990.1" /db_xref="GeneID:878056" /translation="MPIQRQHTNERMSQIVVHNGTVYLAGQVGEDMSAGVEQQTRETL AAIERLLEEAGTDKTRILSVTIYLKDIDADFEGMNRVWDQWLPRGVAPARATVEAKLC EPEILVEMSVVAALP" misc_feature complement(5971859..5972176) /locus_tag="PA5303" /note="This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence...; Region: YjgF_YER057c_UK114_like_2; cd06150" /db_xref="CDD:100007" misc_feature complement(order(5971865..5971867,5971871..5971873, 5971877..5971879,5971907..5971933,5971946..5971948, 5971958..5971960,5971967..5971969,5972003..5972005, 5972009..5972011,5972015..5972020,5972024..5972026, 5972126..5972131,5972135..5972137,5972141..5972143, 5972150..5972152,5972156..5972158,5972165..5972170)) /locus_tag="PA5303" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100007" misc_feature complement(order(5971877..5971879,5971922..5971924, 5971967..5971969,5971979..5971981,5972168..5972170)) /locus_tag="PA5303" /note="putative active site [active]" /db_xref="CDD:100007" gene complement(5972178..5973476) /gene="dadA" /locus_tag="PA5304" /db_xref="GeneID:878057" CDS complement(5972178..5973476) /gene="dadA" /locus_tag="PA5304" /EC_number="1.4.99.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="D-amino acid dehydrogenase small subunit" /protein_id="NP_253991.1" /db_xref="GeneID:878057" /translation="MRVLVLGSGVIGTASAYYLARAGFEVVVVDRQDGPALETSFANA GQVSPGYASPWAAPGIPLKAMKWLLEKHAPLAIKLTSDPSQYAWMLQMLRNCTAERYA VNKERMVRLSEYSRDCLDELRAETGIAYEGRTLGTTQLFRTQAQLDAAGKDIAVLERS GVPYEVLDRDGIARVEPALAKVADKLVGALRLPNDQTGDCQLFTTRLAEMAKGLGVEF RFGQNIERLDFAGDRINGVLVNGELLTADHYVLALGSYSPQLLKPLGIKAPVYPLKGY SLTVPITNPEMAPTSTILDETYKVAITRFDQRIRVGGMAEIAGFDLSLNPRRRETLEM ITTDLYPEGGDISQATFWTGLRPATPDGTPIVGATRYRNLFLNTGHGTLGWTMACGSG RYLADLMAKKRPQISTEGLDISRYSNSPENAKNAHPAPAH" misc_feature complement(5972229..5973476) /gene="dadA" /locus_tag="PA5304" /note="D-amino acid dehydrogenase; Region: PRK00711" /db_xref="CDD:234819" gene complement(5973833..5974177) /locus_tag="PA5305" /db_xref="GeneID:879653" CDS complement(5973833..5974177) /locus_tag="PA5305" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253992.1" /db_xref="GeneID:879653" /translation="MTTRSKLGIALLALGISLSAMAMDLGQAMSALGGAKAQGLVGEQ ADGYLGVVSNSGQAADIAAQINAARRAEYQKVANSSGASLADVEAMAGKKAMERTPAG QYVQVGGKWVKK" misc_feature complement(5973836..5974177) /locus_tag="PA5305" /note="Uncharacterized conserved protein YdbL, DUF1318 family [Function unknown]; Region: YdbL; COG3784" /db_xref="CDD:442998" gene complement(5974190..5974381) /locus_tag="PA5306" /db_xref="GeneID:879654" CDS complement(5974190..5974381) /locus_tag="PA5306" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253993.1" /db_xref="GeneID:879654" /translation="MRLCALFAVLLLGSLTMACTPTVQLAAPSEPININLNVKIEHEI YIKVDKALDGIINENSGLF" misc_feature complement(5974199..5974300) /locus_tag="PA5306" /note="YnbE-like lipoprotein; Region: Lipoprotein_19; pfam13617" /db_xref="CDD:463935" gene complement(5974402..5976969) /locus_tag="PA5307" /db_xref="GeneID:878435" CDS complement(5974402..5976969) /locus_tag="PA5307" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253994.1" /db_xref="GeneID:878435" /translation="MRLRRRTTLLLVFAVLLLLAFGYGWHAWRSLLREQGVERLEWQG LGLSAEGIGLRRLALERRGADGASLRLDVEHALLRWPGLSGWRPRLPGLRVEQVALAW QPAAASSDDDSAALDWTSLRETLAWLPEQIHLERFHLDLPCPAGRCEQDGGLDIGRPS GALFPLAAQLRLQQEAQQAQLDAQLFEEPTGWRLRARAQLDRQALLTLDSQLAPSDGD GLWQGRLEAPGLPDTRGLVVWLNRWLPEAQRLPDAPQALRLQADWTIRLAPGSDWLEP RRVLDGGGSAALLVQAPQAWPLPGLGNVQGELQVQLDGDEGAWLPRQLRSDLRLSQLH GEWLQALPAELRPSALGLRSEPLERDADSVTALRLAFTSEGASTLKLETRLDLLGISP WAARLVEGRLQVGAPHLQYQGWKAERLVAEIPLEGRLDGQRANLSFGRGARLQAASLA EPSTLHLGQPRLNLAGTALELAYQPLALHFAGPLQAQVGQLRQANLKPLAWTFEGPLD TTLERTSLKGRLSNGAGLAADIQLQRDAKTPLALSAKLAEVFFRTGNPLAATLADWPG LLELGNGRATAAAGWKLDAAGGSSLDLDLTLKGLDGIYDRSELKGLGGSLALRLRGGQ LSLDSPGLSLAEANPGLPLGPVSFRGRYEAPLSAPGSGRLSWQTLQSGLFGGQASVPA GSIRLGQAEQKFALRIQGIQLGEIFRVYPAEGLAGEGTLDGELPLMLNRWKPSVSGGQ VKAREPGYLRFRSAKIEALGRSNPGMKLVADALDDFHYDVLQSSVDYHENGKLLLGLR LQGSNPDLEKGRPVNLNVNLEEDIPALLTSLQLSDRVSETIRQRVQERMQKRKASAP" misc_feature complement(5975179..>5976714) /locus_tag="PA5307" /note="Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]; Region: PksD; COG3321" /db_xref="CDD:442550" misc_feature complement(5974453..5975052) /locus_tag="PA5307" /note="Dicarboxylate transport; Region: DctA-YdbH; pfam11739" /db_xref="CDD:432037" gene 5977123..5977611 /gene="lrp" /locus_tag="PA5308" /db_xref="GeneID:878436" CDS 5977123..5977611 /gene="lrp" /locus_tag="PA5308" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="leucine-responsive regulatory protein" /protein_id="NP_253995.1" /db_xref="GeneID:878436" /translation="MRTQHQSKRELDKIDRNILRILQEEGRISFTELGERVGLSTTPC TERVRRLEREGLIMGYHARLNPQHLKASLLVFVEISLDYKSGDTFEEFRRAVLKLPHV LECHLVSGHFDYLVKARISEMASYRKLLGDILLKLPHVRESKSYIVMEEVKESLDLPV PD" misc_feature 5977147..5977587 /gene="lrp" /locus_tag="PA5308" /note="leucine-responsive transcriptional regulator Lrp; Region: PRK11169" /db_xref="CDD:183009" gene 5977789..5979108 /locus_tag="PA5309" /db_xref="GeneID:877640" CDS 5977789..5979108 /locus_tag="PA5309" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_253996.1" /db_xref="GeneID:877640" /translation="MNARVHQPVHTAQHAPSYYAATLNRRIECPPLAGEEQADVCVVG GGFSGVNTALELAQRGFSVVLLEAHQIGWGASGRNGGQLIRGVGHDVEQFLPVIGADG VKALKLMGLEAVEIVRRRVEQYAIDCDLRWGYCDLANKPGDYQGFREDMEELQALGYR HEMRLVPAAEMRSVIGSDRYVGGLVDMGSGHLHPLNLVLGEAAAAQSLGVRLFERSTV MRIDYGTEVQVHTATGKVRAKTLVLGCNAYMNDLNPLLGGKVLPAGSYVIATEPLDEK LARQLLPQNMAVCDQRVALDYYRLSADNRLLFGGACHYSGRDPSDIAAYMRPKMLEVF PQLANVRIDYQWGGMIGIGANRLPQIGRLPGQPNVYFAQAYSGHGVNATHLAGQLLAE AIGGQQSDGFDLFAKVPHITFPGGKLLRSPLLALGMAWYRLKEKLGS" misc_feature 5977894..5978988 /locus_tag="PA5309" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" gene 5979194..5980783 /locus_tag="PA5310" /db_xref="GeneID:877641" CDS 5979194..5980783 /locus_tag="PA5310" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_253997.1" /db_xref="GeneID:877641" /translation="MSRSFEFPREISLLRRFLLLALLALSGCASTPPPQPSSALPAEG TWLARQAEIQGRDHPGQSGFHLLSASEDAFVARAALIRAAQRSLDIQYYIVHDGLTTR ALAYELLKAADRGVRVRILIDDTASDGWDYEIGVLSAHPNIQVRLFNPLHLGRATGIT RGVGRLFNLSQQHRRMHNKLWLADGTAAIVGGRNLGDEYFNAKPEMNFTDLDLLGVGP IANQLSHSFDQYWNSAISRPIEDFLWRAPYPGELESARRKLQRYLRKESVKESGYIRH LFDRGDQPRLGNWLENLTWARAEAIWDAPLKVLSRGEPDPHLLLSPHLAGLFKGVQKE LILVSAYFVPAKDGLNYLTGKADSGVRVRLLTNSLEATDVPAVHAGYAPYRMALLEHG VKLYELRANPDQPLSGAPWRLHGSSSASLHSKAMVFDRRKVFIGSFNFDPRSILWNTE VGVIVDSPLLAEQVRQLALEGMAPSVSYQVRIDRSGSRPKLVWIDERDGRAQVLRHEP GSLWRRLNAWVAGMIGLEKML" misc_feature 5979377..5980660 /locus_tag="PA5310" /note="Phosphatidylserine/phosphatidylglycerophosphate/car diolipin synthase [Lipid transport and metabolism]; Region: Cls; COG1502" /db_xref="CDD:441111" misc_feature 5980094..5980762 /locus_tag="PA5310" /note="Putative catalytic domain, repeat 2, of Escherichia coli uncharacterized protein ymdC and similar proteins; Region: PLDc_ymdC_like_2; cd09113" /db_xref="CDD:197212" misc_feature order(5980457..5980459,5980463..5980465,5980502..5980504, 5980508..5980510,5980541..5980543) /locus_tag="PA5310" /note="putative active site [active]" /db_xref="CDD:197212" misc_feature 5980457..5980459 /locus_tag="PA5310" /note="catalytic site [active]" /db_xref="CDD:197212" gene complement(5980787..5981950) /locus_tag="PA5311" /db_xref="GeneID:877978" CDS complement(5980787..5981950) /locus_tag="PA5311" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_253998.1" /db_xref="GeneID:877978" /translation="MRWGSYFAVCSAVISIGLALGLTMPLVSLRLESWGYGSFAIGVM ASTPAVGVLLGAMIAGRLAARVGTPRLMQLCLLTGAASVGLLALLQSYPVWLLLRLLI GVQLTVVFILGESWINQLAVEKWRGRLVALYGTGYALSQLSGPVLLTFIGTADDRGFW FGVCLLIAGSLLLLGRSGAPRVDPHSASGRGLWAFCRGLPAIAWAVVLFAAFEAMILT LLPVYGLRQGFPQAVALAMVSTVVVGDALLQLPIGWLADRVSRSGLFGGCGLVLLLSS LAIPLLLQTPLIWPLLVLFGASAGGLFTLALILIGERYRDDALVRANAHVAQLWGIGC LLGPLATGAASQWISGHALPLMMALGAAGFVVLVRLRGAIPADDEATGLEASE" misc_feature complement(5980847..5981926) /locus_tag="PA5311" /note="YcaD and similar transporters of the Major Facilitator Superfamily; Region: MFS_YcaD_like; cd17477" /db_xref="CDD:341030" misc_feature complement(order(5980949..5980951,5980958..5980963, 5980970..5980975,5980982..5980984,5981030..5981032, 5981042..5981044,5981054..5981059,5981204..5981206, 5981216..5981218,5981288..5981290,5981297..5981305, 5981312..5981317,5981324..5981326,5981528..5981530, 5981537..5981542,5981549..5981551,5981609..5981611, 5981618..5981626,5981630..5981635,5981783..5981785, 5981879..5981881,5981888..5981893,5981900..5981905)) /locus_tag="PA5311" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341030" gene complement(5982097..5983590) /locus_tag="PA5312" /db_xref="GeneID:877979" CDS complement(5982097..5983590) /locus_tag="PA5312" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase" /protein_id="NP_253999.1" /db_xref="GeneID:877979" /translation="MTTLTRADWEARAKDLKIEGRAFVNGEYSNAASGETFDCLSPVD GRFLAKVASCDLADAEQAVKVARNAFDSGAWSRLAPAKRKQTMIRFADLLLENAEELA LLETLDMGKPISDSLHIDVASAANSLRWSAEAIDKIYDEVAATPHAELGLVTREPVGV VAAIVPWNFPLLMSCWKLGPALATGNSVILKPSEKSPLTAIRIAQLAVEAGIPKGVFN VLPGYGHTVGKALALHMDVDTLVFTGSTKIAKQLMVYAGESNMKRVWLEAGGKSPNIV FADAPDLKAAAEAAAGAIAFNQGEVCTAGSRLLVERSIKDKFLPLVIEALKGWKPGNP LDPETNVGALVDTQQMNTVLSYIEAGHNDGAKLVAGGKRTLEETGGTYVEPTIFDGVT NAMKIAREEIFGPVLSVIEFEDAEEAVRIANDTPYGLAAAVWTSNLSKAHLTAKALRA GSVWVNQYDGGDMTAPFGGFKQSGNGRDKSLHAFDKYTELKATWIKL" misc_feature complement(5982106..5983491) /locus_tag="PA5312" /note="Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like; Region: ALDH_GABALDH-PuuC; cd07112" /db_xref="CDD:143430" misc_feature complement(order(5982190..5982192,5982304..5982306, 5982382..5982384,5982388..5982390,5982685..5982687, 5982784..5982792,5982835..5982840,5982847..5982849, 5982856..5982867,5983009..5983014,5983018..5983020, 5983063..5983065,5983087..5983101)) /locus_tag="PA5312" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:143430" misc_feature complement(order(5982685..5982687,5982694..5982696, 5982790..5982792,5983087..5983089)) /locus_tag="PA5312" /note="catalytic residues [active]" /db_xref="CDD:143430" gene 5983820..5985154 /locus_tag="PA5313" /db_xref="GeneID:877980" CDS 5983820..5985154 /locus_tag="PA5313" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="omega amino acid--pyruvate transaminase" /protein_id="NP_254000.1" /db_xref="GeneID:877980" /translation="MTMNDEPQSSSLDNFWMPFTANRQFKARPRLLESAEGIHYIAQG GRRILDGTAGLWCCNAGHGRREISEAVARQIATLDYAPPFQMGHPLPFELAARLTEIA PPSLNKVFFTNSGSESADTALKIALAYQRAIGQGTRTRLIGRELGYHGVGFGGLSVGG MVNNRKAFSANLLPGVDHLPHTLDVARNAFTVGLPEHGVEKAEELERLVTLHGAENIA AVIVEPMSGSAGVVLPPKGYLQRLREITRKHGILLIFDEVITGFGRVGEAFAAQRWGV VPDLLTCAKGLTNGSIPMGAVFVDEKIHAAFMQGPQGAIEFFHGYTYSGHPVACAAAL ATLDIYRRDDLFQRAVELEGYWQDALFSLRDLPNVVDIRAVGLVGGVQLAPHADGPGK RGYDVFERCFWEHDLMVRVTGDIIAMSPPLIIDKPHIDQIVERLAQAIRASV" misc_feature 5983820..5985145 /locus_tag="PA5313" /note="beta alanine--pyruvate transaminase; Provisional; Region: PRK09221" /db_xref="CDD:181707" misc_feature order(5984159..5984167,5984261..5984266,5984270..5984272, 5984486..5984488,5984585..5984587,5984591..5984596, 5984672..5984674) /locus_tag="PA5313" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99735" misc_feature order(5984162..5984167,5984261..5984266,5984486..5984488, 5984585..5984587,5984594..5984596,5984672..5984674) /locus_tag="PA5313" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature 5984672..5984674 /locus_tag="PA5313" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 5985219..5985581 /locus_tag="PA5314" /db_xref="GeneID:877812" CDS 5985219..5985581 /locus_tag="PA5314" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254001.1" /db_xref="GeneID:877812" /translation="MNIEQIVDFAQANSAPEHYSPAPEKILKGDPKQSVRNHYGSPCG QFNAGIWEGAVGQWTVNYTEHEYCEIIQGVSVLRDRHGNAKTVRAGDRFVIPAGFQGT WEVLEACRKVYVIFEAKA" misc_feature 5985243..5985566 /locus_tag="PA5314" /note="Predicted enzyme of the cupin superfamily [General function prediction only]; Region: COG3450" /db_xref="CDD:442673" gene complement(5985716..5985871) /gene="rpmG" /locus_tag="PA5315" /db_xref="GeneID:877813" CDS complement(5985716..5985871) /gene="rpmG" /locus_tag="PA5315" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L33" /protein_id="NP_254002.1" /db_xref="GeneID:877813" /translation="MRELIRLVSSAGTGHFYTTDKNKRTKPEKIEIKKYDPVVRQHVI YKEAKIK" misc_feature complement(5985725..5985871) /gene="rpmG" /locus_tag="PA5315" /note="50S ribosomal protein L33; Validated; Region: rpmG; PRK00595" /db_xref="CDD:179075" gene complement(5985883..5986119) /gene="rpmB" /locus_tag="PA5316" /db_xref="GeneID:880891" CDS complement(5985883..5986119) /gene="rpmB" /locus_tag="PA5316" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L28" /protein_id="NP_254003.1" /db_xref="GeneID:880891" /translation="MSRVCQVTGKGPVTGNNISHAHNKTRRRFLPNLQHHRFWVESEK RFVRLRVSAKGMRIIDKRGIEAVLADLRARGEKF" misc_feature complement(5985916..5986119) /gene="rpmB" /locus_tag="PA5316" /note="Ribosomal protein L28 [Translation, ribosomal structure and biogenesis]; Region: RpmB; COG0227" /db_xref="CDD:439997" gene 5986120..5986170 /locus_tag="PA5316.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /db_xref="GeneID:9793388" ncRNA 5986120..5986170 /ncRNA_class="other" /locus_tag="PA5316.1" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /db_xref="GeneID:9793388" gene 5986475..5988055 /locus_tag="PA5317" /db_xref="GeneID:880892" CDS 5986475..5988055 /locus_tag="PA5317" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="dipeptide ABC transporter substrate-binding protein" /protein_id="NP_254004.1" /db_xref="GeneID:880892" /translation="MRLAAFSLFLAPLLLAQPAAAAALSVCTEASPEGFDVVQYNSLT TTNASADVLMNRLVEFDAGKGTVVPSLAERWSVSDDGLSYRFDLRQGVHFHSTAYFKP SRTLDADDVVFSFQRMLDPANPWHKVAQNGFPHAQSMQLPELIKRVEKSGDHQVLFVL DHPDATFLPMLSMGFASIYSAEYADQLMKAGTPEKLNAEPIGSGPFVFKRFQKDAVVR YAANPEYFAGKPAVDALIFAITPDANVRLQKLRRGECQIALSPKPLDVESARKDASLK VEQTPAFMTAFVALNTQHPPLDDPKVRQAINLAFDRTSYLQAVFEGSASAATGIYPPN TWSYARDIPAYPHAPEQARKLLAGKQLPELNIWTRPSGSLLNPNPSLGAQLLQADLAE AGIKANIRVIEWGELIRRAKNGEHDLLFMGWAGDNGDPDNFLTPQFSCASVKSGLNFA RYCDPGLDKLIADGKAASSQEQRTGLYHQAQKLIHEQALWLPLAHPTAFALTRQEVQG YQVNPFGRQDFSRVAVKR" misc_feature 5986550..5988001 /locus_tag="PA5317" /note="The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold; Region: PBP2_DppA_like; cd08493" /db_xref="CDD:173858" misc_feature order(5987684..5987686,5987696..5987698,5987735..5987746, 5987750..5987752) /locus_tag="PA5317" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:173858" gene 5988081..5988629 /locus_tag="PA5318" /db_xref="GeneID:877885" CDS 5988081..5988629 /locus_tag="PA5318" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254005.1" /db_xref="GeneID:877885" /translation="MDLDRLYLPHWQFSEHHQRLIDAPAAAVLDAVEDLLRFDDPLVR AFLVLREAPGRLAGLLGRRNDLAGRPRFGLHEFTRLERRADQAIAYGLVGRFWRADFA LERIADGEHFRCYDQPGVAKLVLCFRCTPSASGTLLHTETRVFCPDRASRLRFTPYWL AIRPVSGLIRRRLLAGIERRLG" gene complement(5988646..5989320) /gene="radC" /locus_tag="PA5319" /db_xref="GeneID:877886" CDS complement(5988646..5989320) /gene="radC" /locus_tag="PA5319" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA repair protein RadC" /protein_id="NP_254006.1" /db_xref="GeneID:877886" /translation="MSIRDWPEAERPREKLLEQGAAALSDAELLAIFLRTGVTGCSAV ELSRRLLSEFGGLRALLEADLASFCGHLGLGVAKYAQLQAVLEMGRRHLAERLRRDSI LESPQAVRDYLKARLRHEQHEVFACLFLDTRHRVLSFEVLFQGSIDGASVYPRQVVKR TLAHNAAALILTHNHPSGDARPSLADRQLTARLKEALALIDVRVLDHFIIGDGEPLSL AEYGWL" misc_feature complement(5988649..5989320) /gene="radC" /locus_tag="PA5319" /note="DNA repair protein RadC; Region: PRK00024" /db_xref="CDD:178801" gene 5989460..5990668 /gene="coaC" /locus_tag="PA5320" /db_xref="GeneID:877887" CDS 5989460..5990668 /gene="coaC" /locus_tag="PA5320" /EC_number="4.1.1.36" /EC_number="6.3.2.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase" /protein_id="NP_254007.1" /db_xref="GeneID:877887" /translation="MQRLYRKRIVLGVGGGIAAYKSAELVRRLRDQGAEVRVVMTQGG REFITPLTLQALSGHPVHTDLLDPAAEAAMGHIELARWADLVLIAPATADLMARLVQG VANDLLTTLVLATDAQIALAPAMNQAMWRDTATQANAELLRQRGFHLFGPAAGSQACG DVGLGRMLEAEELAQRAADCFQRQALTGVHVLITAGPTQENIDPVRYITNHSSGKMGF ALAEAAVEAGARVTLVTGPVHLPTPDRVQRVDVVSARDMLAACEAAMPCDLLIASAAV ADYRPEVVAAHKLKKDPTSGEGLLLQLVRNPDILATLAQREDRPFSVGFAAETENLLD YAARKLKDKNLDLIVANDVANPSIGFNSDENAITVIDRDLHPSTFAQTSKGKIARQLV AFIADRLNQQ" misc_feature 5989469..5990662 /gene="coaC" /locus_tag="PA5320" /note="Phosphopantothenoylcysteine synthetase/decarboxylase CoaBC [Coenzyme transport and metabolism]; Region: CoaBC; COG0452" /db_xref="CDD:440221" gene 5990676..5991131 /gene="dut" /locus_tag="PA5321" /db_xref="GeneID:879405" CDS 5990676..5991131 /gene="dut" /locus_tag="PA5321" /EC_number="3.6.1.23" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="deoxyuridine 5'-triphosphate nucleotidohydrolase" /protein_id="NP_254008.1" /db_xref="GeneID:879405" /translation="MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGP GQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWN RGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH" misc_feature 5990676..5991128 /gene="dut" /locus_tag="PA5321" /note="dUTP diphosphatase; Region: dut; PRK00601" /db_xref="CDD:234802" misc_feature order(5990757..5990762,5990796..5990798,5990811..5990816, 5990820..5990822,5990871..5990873,5990877..5990894, 5990910..5990918,5990934..5990936,5990943..5990945, 5990964..5990966,5990970..5990972,5990976..5990978, 5990982..5990984,5990994..5991008,5991015..5991017, 5991027..5991029) /gene="dut" /locus_tag="PA5321" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:143638" misc_feature order(5990883..5990891,5990934..5990942,5990949..5990951, 5990961..5990966) /gene="dut" /locus_tag="PA5321" /note="active site" /db_xref="CDD:143638" gene 5991168..5993774 /gene="algC" /locus_tag="PA5322" /db_xref="GeneID:879406" CDS 5991168..5993774 /gene="algC" /locus_tag="PA5322" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phosphomannomutase" /protein_id="NP_254009.2" /db_xref="GeneID:879406" /translation="MKLFQRTAKDGNELGDLLEPEKKPRKAASERADGKDLLPGIGAS LLGVAAAGALLWFGVFGGAGEAQQRQLDAAWAEGQAGALRQALQQLAADTRAAAASPL ALEALQSGDATRIEAAQRSLLAWDGVVDAHLNAPGQAAQDNDSPGPVSFAALDILHRV ESGQNVAAEAYKVGQRWLLYSAAPVRGADQSLQGTLLLAVDLQRLLRALPPLPGDAGQ VQLVQQFSGAPAQVLLQRGTPAPGKGAQALDSGNPNWKLNYTPGSVASTQASPLLLAL AALLALLGGILGTYLTRSSLLRRLHQDVLTLGQYLQELGGQRTAKPPVPSLPGFAPLI QALARQPRRKPEPTSVPSPAKAAPVAPVAVAKAPPREEPALADPLFQNTDILDIDILD EDQDLLGLEQTPIMSTAKAPTLPASIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLA RGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGV MLTGSHNPPDYNGFKIVVAGETLANEQIQALRERIEKNDLASGVGSVEQVDILPRYFK QIRDDIAMAKPMKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGK PENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPG ADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKER WFGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQ RDAQWGEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQ LKAVDSSLPVPF" misc_feature 5992419..5993738 /gene="algC" /locus_tag="PA5322" /note="The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a...; Region: PMM_PGM; cd03089" /db_xref="CDD:100091" misc_feature order(5992425..5992427,5992431..5992433,5992440..5992442, 5992704..5992712,5992734..5992736,5993106..5993108, 5993112..5993114,5993118..5993123,5993235..5993237, 5993298..5993306,5993355..5993357,5993361..5993363, 5993367..5993369,5993643..5993645,5993649..5993657) /gene="algC" /locus_tag="PA5322" /note="active site" /db_xref="CDD:100091" misc_feature order(5992431..5992433,5992440..5992442,5992704..5992706, 5993121..5993123,5993235..5993237,5993298..5993300, 5993304..5993306,5993355..5993357,5993361..5993363, 5993367..5993369,5993643..5993645,5993649..5993657) /gene="algC" /locus_tag="PA5322" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100091" misc_feature order(5992704..5992706,5993106..5993108,5993112..5993114, 5993118..5993120) /gene="algC" /locus_tag="PA5322" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:100091" gene 5993791..5994696 /gene="argB" /locus_tag="PA5323" /db_xref="GeneID:879620" CDS 5993791..5994696 /gene="argB" /locus_tag="PA5323" /EC_number="2.7.2.8" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="acetylglutamate kinase" /protein_id="NP_254010.1" /db_xref="GeneID:879620" /translation="MTLSRDDAAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEEL KAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEM VLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVG EVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLT NIAGLMDKQGQVLTGLSTEQVNELIADGTIYGGMLPKIRCALEAVQGGVTSAHIIDGR VPNAVLLEIFTDSGVGTLISNRKRH" misc_feature 5993803..5994684 /gene="argB" /locus_tag="PA5323" /note="acetylglutamate kinase; Provisional; Region: PRK00942" /db_xref="CDD:234869" misc_feature 5993830..5993859 /gene="argB" /locus_tag="PA5323" /note="feedback inhibition sensing region [active]" /db_xref="CDD:239783" misc_feature order(5993833..5993841,5993845..5993847,5993854..5993859, 5993938..5993940,5993950..5993952,5993962..5993964, 5994022..5994027,5994082..5994084,5994091..5994096, 5994109..5994111,5994118..5994120,5994130..5994132, 5994151..5994153,5994157..5994165,5994169..5994171, 5994175..5994186,5994295..5994297,5994322..5994324, 5994625..5994627,5994634..5994639,5994649..5994651) /gene="argB" /locus_tag="PA5323" /note="homohexameric interface [polypeptide binding]; other site" /db_xref="CDD:239783" misc_feature order(5993887..5993889,5993896..5993901,5994379..5994381, 5994442..5994450,5994460..5994462,5994529..5994531, 5994535..5994537,5994541..5994546,5994553..5994555) /gene="argB" /locus_tag="PA5323" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:239783" misc_feature order(5993989..5993994,5994055..5994060,5994373..5994375, 5994379..5994384) /gene="argB" /locus_tag="PA5323" /note="N-acetyl-L-glutamate binding site [chemical binding]; other site" /db_xref="CDD:239783" gene complement(5994741..5995811) /locus_tag="PA5324" /db_xref="GeneID:879621" CDS complement(5994741..5995811) /locus_tag="PA5324" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_254011.1" /db_xref="GeneID:879621" /translation="MHNNAADARYELAQVSTFLLQTLAEVVEGHGVDPARLCRGLGFT VEDLQDPTQRISYRQAVSMIQRALQALPERGLGLWVGHQNVLGTLGLLGHVLSLCRTL RDAFDIGVRYQHSSGGIVTSSVYQQGDTFFVEVECHLPSSEVQVFAIEEFFASLLVYG RALVSPAFEPLGIELIHAAPPYAGEYLRLLGPQVRFGCLHNRMAIASHWLDMRLPNHN LPALRQALALLEQESTQVHRKLDLVQAVERAIARDLSLGSQIERISAELNMSSRTLRR RLAEHGLTFEALLEQVRRGRAMSLLGNPGMSIERITEEVGYRDIRSFRRAFKRWTGVS PATFRSEGTSPLDQVFTLAARR" misc_feature complement(5995170..5995721) /locus_tag="PA5324" /note="Arabinose-binding domain of AraC transcription regulator, N-term; Region: Arabinose_bd; pfam12625" /db_xref="CDD:432679" misc_feature complement(5994780..>5995373) /locus_tag="PA5324" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" gene 5996036..5996986 /locus_tag="PA5325" /db_xref="GeneID:880923" CDS 5996036..5996986 /locus_tag="PA5325" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254012.1" /db_xref="GeneID:880923" /translation="MNPIRPHRPLRLAACVTLAVSCCTHASEGGVDNIGPGTDGFFTL PLDVDNLPDHMFAFNVYYNHYEARKLNISSFGGKVSDVKISSDAIIPRLDYLSPLRIF GGRLGGYIAQPYLRQRVAAFGLSDERESMGDTTFAPIILWDMGKDLTLAAAVEVTVPT GKYDAERLANTSNNFYTYKPLFSFTWLPTERTELSLKATYSFNMENHDTDYRSGQIFH FDYSASYRVTDNLRLGLNGYYLKQTTDDKQNGETVRVFGFGEEVDDGVRGQVFAIGPA VHLTFLKYASAEIRWAKEFDVENRPEGDMLWAKLTIPFEL" misc_feature 5996036..5996977 /locus_tag="PA5325" /note="Sphingosine uptake channel SphA-related outer membrane channel [Cell wall/membrane/envelope biogenesis]; Region: SphA; COG4313" /db_xref="CDD:443454" gene complement(5997057..5998265) /locus_tag="PA5326" /db_xref="GeneID:880924" CDS complement(5997057..5998265) /locus_tag="PA5326" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254013.1" /db_xref="GeneID:880924" /translation="MRPADRGGPYDDYFRALNRELKANGPMCPVLLIDLDRLDHNIDV VMRSVRRGGKHLRLVEKSLPSPGLLAYIARRAGTRRLMSFHQPFLNHDAVAFADADIL LGKPLPVRSAELFYREHKGAFDPARQLQWLIDTPQRLRQYLALAQGLGTRMRVNIELD VGLHRGGVADQAALGELLALIAAHPQYLEFAGFMGYDPFVGMGVPGILGSPEELFAKV MALYQGHVDFARQRFAALWTPQLTLNTAGSPSYRMHEKETLSSEVSVGTAMLKPSHYD LASLAEHVPAVYIATPVLKSTGAVQIPALDGKSRLFSWWDPNQRGTFFIYGGNWMADF ASPEGLRSNGIYGRSSNQEMVNGSPSVGLEVDDQVFLRPTQSESVLLQFGDLLALRGG RIVERWPVYA" misc_feature complement(5997060..5998208) /locus_tag="PA5326" /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes Similar to D-Serine Dehydratase and D-Threonine Aldolase, Unknown Group 3; Region: PLPDE_III_DSD_D-TA_like_3; cd06814" /db_xref="CDD:143489" misc_feature complement(order(5997093..5997095,5997276..5997281, 5997288..5997290,5997294..5997296,5997300..5997302, 5997375..5997386,5997765..5997776,5997843..5997845, 5997855..5997857,5997864..5997866,5997933..5997935, 5997984..5997986,5998002..5998007,5998011..5998016, 5998077..5998079,5998083..5998085,5998182..5998184)) /locus_tag="PA5326" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143489" misc_feature complement(order(5997279..5997281,5997465..5997476, 5997519..5997524,5997678..5997680,5997771..5997773, 5997792..5997794,5997954..5997956,5998020..5998022, 5998083..5998085,5998089..5998091)) /locus_tag="PA5326" /note="active site" /db_xref="CDD:143489" misc_feature complement(order(5997465..5997476,5997519..5997524, 5997678..5997680,5997792..5997794,5997954..5997956, 5998020..5998022,5998083..5998085,5998089..5998091)) /locus_tag="PA5326" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]; other site" /db_xref="CDD:143489" misc_feature complement(order(5997465..5997467,5997678..5997680, 5997771..5997773,5998083..5998085)) /locus_tag="PA5326" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:143489" misc_feature complement(5998083..5998085) /locus_tag="PA5326" /note="catalytic residue [active]" /db_xref="CDD:143489" gene complement(5998348..5999676) /locus_tag="PA5327" /db_xref="GeneID:878250" CDS complement(5998348..5999676) /locus_tag="PA5327" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_254014.1" /db_xref="GeneID:878250" /translation="MVGNPALAELLRAPRLIPWRNWSGAQSCLPLAREAPKDLDELVR IIRQASGRIRPVGSGHSFSALVPTDGTLLSLAYFSGLLSHDSVTLQAEFGGGTPMSQM GAPLKEIGQALVNMADIDYQTLAGAIATSTHGTGVGFGSYSAQVRGLQLVTASGEVLE CDAKRNVEVFDAARVSLGALGVVTRVRLQNRAAYRLRERQWIARTEELLEDVEKNTRE NQHWEMLVVTHSDYALSIALNETDEPKTPPLDPAKEGGNEFVGLIEGLDKYLSDFPET RRTLLNSLRHFARFDERVDDSYAVYANVRNVRFNEMEYSVPAEHGPACLREILALIRD KDLRTWFPIEYRYVKADDIPLSMFEGRDSCSISVHQHYSMDHHNFFAAVEPIFWKYAG RPHWGKLHGLNAHQLQGLYPRWKAFAEVRQALDPRGRFLNAHLSSILGVT" misc_feature complement(5998357..5999622) /locus_tag="PA5327" /note="FAD-linked oxidoreductase; Region: bact_FAD_ox; TIGR01679" /db_xref="CDD:130740" gene complement(5999754..6000143) /locus_tag="PA5328" /db_xref="GeneID:878251" CDS complement(5999754..6000143) /locus_tag="PA5328" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="mono-heme cytochrome C" /protein_id="NP_254015.1" /db_xref="GeneID:878251" /translation="MSSTLRPGPGNSRLCRPGLLLALGLMLVACGESTEPPARAADSQ RVPAEPALAQVYSASCKLCHADPASGAPLTGDAAAWAPRLAQGIDTLLDHSINGYKGM PPMGMCMQCSEEQFRALIDFMSAAQDR" misc_feature complement(5999769..6000032) /locus_tag="PA5328" /note="Cytochrome c5 [Energy production and conversion]; Region: CytC5; COG3245" /db_xref="CDD:442476" gene 6000317..6000781 /locus_tag="PA5329" /db_xref="GeneID:878225" CDS 6000317..6000781 /locus_tag="PA5329" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254016.1" /db_xref="GeneID:878225" /translation="MSSAAQRQNYTFFHSLRVRWAEVDPQGIVFNGNYLTYLDVATTE YYRQLGMSYPADLLRGGGDLFAVKSTLEYRAPAHFDDWLDIGTRVARLGRSSLVFELG IWRDEQLLTVGELVYVYADANERQSQPLPDWLREKIRAFERQSPVESGTHAE" misc_feature 6000341..6000748 /locus_tag="PA5329" /note="Acyl-CoA thioesterase FadM [Lipid transport and metabolism]; Region: FadM; COG0824" /db_xref="CDD:440586" gene complement(6000761..6001378) /locus_tag="PA5330" /db_xref="GeneID:878226" CDS complement(6000761..6001378) /locus_tag="PA5330" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254017.1" /db_xref="GeneID:878226" /translation="MVGQDVMRCLMALGLVLQGLSFGAQAAPGGAVELYRYVNDKGVV VLDRQGVPPQYIGKGYQVLNDQGRVIRTVPPAPTAEELRQRKAAQAQASSDAQLLRLY SSLEDVDRARERRLAELDGLSSVARGNLQSLKLQQANLQGQAANQERAGRPVAQALVD QLDDLKQEEKRLQGEIGRFQKAREDAERTYAADRARLSQLLGVSP" gene complement(6001399..6002040) /gene="pyrE" /locus_tag="PA5331" /db_xref="GeneID:878227" CDS complement(6001399..6002040) /gene="pyrE" /locus_tag="PA5331" /EC_number="2.4.2.10" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="orotate phosphoribosyltransferase" /protein_id="NP_254018.1" /db_xref="GeneID:878227" /translation="MQAYQRDFIRFAIERGVLRFGEFTLKSGRTSPYFFNAGLFDSGL ALARLGRFYAEAVIDSGIDFDVLFGPAYKGIPLAATTAVALAEQHQRDLPWCFNRKEA KDHGEGGTLVGAPLSGRVLIIDDVITAGTAIREVMQIIDAQGARAAGVLIALNRQERG KGELSAIQEVERDFGMPVVSIVSLEQVLEYLAEDAELKKHLPAVEAYRAQYGI" misc_feature complement(6001402..6002040) /gene="pyrE" /locus_tag="PA5331" /note="orotate phosphoribosyltransferase; Validated; Region: pyrE; PRK00455" /db_xref="CDD:234771" misc_feature complement(order(6001573..6001575,6001645..6001659, 6001663..6001671,6001822..6001824,6001828..6001830)) /gene="pyrE" /locus_tag="PA5331" /note="active site" /db_xref="CDD:206754" gene 6002121..6002900 /gene="crc" /locus_tag="PA5332" /db_xref="GeneID:878037" CDS 6002121..6002900 /gene="crc" /locus_tag="PA5332" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="catabolite repression control protein" /protein_id="NP_254019.1" /db_xref="GeneID:878037" /translation="MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFDLD DPSFQLDGYFLYACDAELPEQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKV SIATLLLPSGQSGDESLNQKFKFMDDFTHYLSKQRRKRREYIYCGSLYVAHQKMDVKN WRECQQMPGFLAPERAWLDEVFGNLGYADALREVSREGDQFSWWPDSEQAEMLNLGWR FDYQVLTPGLRRFVRNAKLPRQPRFSQHAPLIVDYDWQLSI" misc_feature 6002121..6002879 /gene="crc" /locus_tag="PA5332" /note="Neisseria meningitides Nape-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases; Region: Nape_like_AP-endo; cd10281" /db_xref="CDD:197336" misc_feature order(6002139..6002141,6002145..6002162,6002223..6002225, 6002229..6002231,6002244..6002246,6002310..6002315, 6002397..6002399,6002442..6002444,6002451..6002453, 6002457..6002459,6002472..6002474,6002562..6002564, 6002568..6002570,6002598..6002600,6002604..6002606, 6002610..6002612,6002727..6002729,6002733..6002741, 6002745..6002747,6002757..6002759,6002763..6002765, 6002769..6002771,6002775..6002780,6002847..6002849, 6002853..6002858) /gene="crc" /locus_tag="PA5332" /note="putative active site [active]" /db_xref="CDD:197336" misc_feature order(6002139..6002141,6002145..6002162,6002223..6002225, 6002229..6002231,6002244..6002246,6002310..6002315, 6002397..6002399,6002442..6002444,6002451..6002453, 6002457..6002459,6002472..6002474,6002562..6002564, 6002568..6002570,6002598..6002600,6002604..6002606, 6002610..6002612,6002727..6002729,6002733..6002741, 6002757..6002759,6002763..6002765,6002769..6002771, 6002775..6002777,6002847..6002849,6002856..6002858) /gene="crc" /locus_tag="PA5332" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:197336" misc_feature order(6002139..6002141,6002223..6002225,6002442..6002444, 6002451..6002453,6002562..6002564,6002568..6002570, 6002856..6002858) /gene="crc" /locus_tag="PA5332" /note="putative phosphate binding site [ion binding]; other site" /db_xref="CDD:197336" misc_feature order(6002139..6002141,6002223..6002225,6002442..6002444, 6002562..6002564,6002568..6002570,6002778..6002780, 6002853..6002858) /gene="crc" /locus_tag="PA5332" /note="putative catalytic site [active]" /db_xref="CDD:197336" misc_feature order(6002145..6002147,6002223..6002225,6002853..6002855) /gene="crc" /locus_tag="PA5332" /note="metal binding site A [ion binding]; metal-binding site" /db_xref="CDD:197336" misc_feature order(6002442..6002444,6002451..6002453,6002562..6002564, 6002568..6002570,6002727..6002729,6002769..6002771, 6002775..6002777,6002856..6002858) /gene="crc" /locus_tag="PA5332" /note="putative AP binding site [nucleotide binding]; other site" /db_xref="CDD:197336" misc_feature order(6002562..6002564,6002568..6002570,6002856..6002858) /gene="crc" /locus_tag="PA5332" /note="putative metal binding site B [ion binding]; other site" /db_xref="CDD:197336" gene complement(6002959..6003330) /locus_tag="PA5333" /db_xref="GeneID:878038" CDS complement(6002959..6003330) /locus_tag="PA5333" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254020.1" /db_xref="GeneID:878038" /translation="MNDVSEEVAATPGQEARQWAMFCHFAAFIGLVFPFGSLLGPLIV WQLKRESDPFVDAQGKEALNFQITVALAMFVSFLLMLVVIGFFLLGLVCLAALVLTII AGIKANEGKAYRYPFCLRLIK" misc_feature complement(6002962..6003315) /locus_tag="PA5333" /note="Uncharacterized Tic20-related protein, DUF4870 domain [General function prediction only]; Region: Tic20a; COG3296" /db_xref="CDD:442525" gene complement(6003377..6004096) /gene="rph" /locus_tag="PA5334" /db_xref="GeneID:878218" CDS complement(6003377..6004096) /gene="rph" /locus_tag="PA5334" /EC_number="2.7.7.56" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribonuclease PH" /protein_id="NP_254021.1" /db_xref="GeneID:878218" /translation="MNRPSGRAADQLRPIRITRHYTKHAEGSVLVEFGDTKVICTVSA ESGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREASRGKQGGRTLEIQRLIGRSLRAA LDLSKLGENTLYIDCDVIQADGGTRTASITGATVALIDALAVLKKRGALKGNPLKQMV AAVSVGIYQGVPVLDLDYLEDSAAETDLNVVMTDAGGFIEVQGTAEGAPFRPAELNAM LELAQQGMQELFELQRAALAE" misc_feature complement(6003380..6004093) /gene="rph" /locus_tag="PA5334" /note="Ribonuclease PH [Translation, ribosomal structure and biogenesis]; Region: Rph; COG0689" /db_xref="CDD:440453" gene 6004277..6005140 /locus_tag="PA5335" /db_xref="GeneID:878219" CDS 6004277..6005140 /locus_tag="PA5335" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254022.1" /db_xref="GeneID:878219" /translation="MVHSMTAFARVEQAGTHGTLSWELRSVNHRYLEPHLRLPDAFRD LEGAVREALRQGLSRGKVECTLRFAEETAGKSLQVDQERARQLVAAAEGVAALIRQPA PLDPLAVLAWPGVLVADSADPQALNAAALEAFGQALEQLKAGRSREGLELAKLLNDRL DAMLVEVGNLRELVPTMLANQRQKILDRFAELKAELDPQRLEQELVLLAQKSDVAEEL DRLATHVGEVRRVLKAGGAAGRRLDFLMQELNREANTLGSKAFDPRSTQAAVNLKVLI EQMREQVQNIE" misc_feature 6004277..6005137 /locus_tag="PA5335" /note="Uncharacterized stationary-phase protein YicC, UPF0701 family [Function unknown]; Region: YicC; COG1561" /db_xref="CDD:441169" gene 6005199..6005810 /gene="gmk" /locus_tag="PA5336" /db_xref="GeneID:878047" CDS 6005199..6005810 /gene="gmk" /locus_tag="PA5336" /EC_number="2.7.4.8" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="guanylate kinase" /protein_id="NP_254023.1" /db_xref="GeneID:878047" /translation="MSGTLYIVSAPSGAGKTSLVKALLDAAPEVRVSVSHTTRGMRPG EVDGVNYHFTSREEFLAMLERNEFLEHAEVFGNLYGTSQRWVEKTLAEGLDLILEIDW QGAQQVRRLMPEAQSIFILPPSQEALRQRLTNRGQDSDEVIERRMREAVSEMSHYVEY DHLVINDDFAHALDDLKAIFRARQLRQDAQQQRHAELLGRLLA" misc_feature 6005199..6005807 /gene="gmk" /locus_tag="PA5336" /note="guanylate kinase; Provisional; Region: gmk; PRK00300" /db_xref="CDD:234719" misc_feature order(6005226..6005228,6005244..6005246,6005292..6005294, 6005313..6005315,6005322..6005324,6005349..6005351, 6005418..6005420,6005433..6005435) /gene="gmk" /locus_tag="PA5336" /note="catalytic site [active]" /db_xref="CDD:238026" misc_feature order(6005226..6005228,6005244..6005246) /gene="gmk" /locus_tag="PA5336" /note="G-X2-G-X-G-K; other site" /db_xref="CDD:238026" gene 6005899..6006165 /gene="rpoZ" /locus_tag="PA5337" /db_xref="GeneID:878048" CDS 6005899..6006165 /gene="rpoZ" /locus_tag="PA5337" /EC_number="2.7.7.6" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit omega" /protein_id="NP_254024.1" /db_xref="GeneID:878048" /translation="MARVTVEDCLDNVDNRFELVMLATKRARQLATGGKEPKVAWEND KPTVVALREIASGLVDENVVQQEDIVEDEPLFAAFDDEANTEAL" misc_feature 6005899..6006078 /gene="rpoZ" /locus_tag="PA5337" /note="DNA-directed RNA polymerase, subunit K/omega [Transcription]; Region: RpoZ; COG1758" /db_xref="CDD:441364" gene 6006231..6008336 /gene="spoT" /locus_tag="PA5338" /db_xref="GeneID:877912" CDS 6006231..6008336 /gene="spoT" /locus_tag="PA5338" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase" /protein_id="NP_254025.1" /db_xref="GeneID:877912" /translation="MPGIDAFADRLSSYLGPDQVNLVRRAYYYAEQAHDGQRRRSGEP YVTHPLAVSNILADMHMDHQSLMAAMLHDVIEDTGIAKEALTAQFGETVSELVDGVSK LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAK ETLEIYAPIANRLGMHTMRVEFEDLGFKAMHPMRAERIRQAVKKARGNRREIVGKIQE SLVNCLAREGMEGQVIGREKHLYSIYQKMRGKRKAFNEIMDVYAFRIIVDKVDTCYRV LGAVHSLYKPFPGRFKDYIAIPKANGYQSLHTTLFGMHGVPIEIQIRTREMEEMANHG IAAHWLYKSNDETPKGTHARARQWVKGVLELQQRAGNSLEFIENVKIDLFPDEVYVFT PKGRIMELPKGSTAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGQTVEIVTAPG ARPNPAWLSFVVTGKARTHIRHALKLQRRSESINLGERLLNKTLTGFDSHLEKIPQER IQAVLAEYRMEVFEDLLEEIGLGNRMAYVVARRLLSSEGEEAPSAEGPLAIRGTEGLV LSYAKCCTPIPGDPIVGHLSAGKGMVVHLESCKNISEVRHNPEKCIQLSWAKDVTGEF NVELRVELEHQRGLIALLATSVNAADGNIEKISMDERDGRISVVQLVVSVHDRVHLAR VIKKLRALKGVIRITRLRS" misc_feature 6006231..6008333 /gene="spoT" /locus_tag="PA5338" /note="(p)ppGpp synthase/hydrolase, HD superfamily [Signal transduction mechanisms, Transcription]; Region: SpoT; COG0317" /db_xref="CDD:440086" gene 6008398..6008778 /locus_tag="PA5339" /db_xref="GeneID:877913" CDS 6008398..6008778 /locus_tag="PA5339" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254026.1" /db_xref="GeneID:877913" /translation="MTKTVIHTDNAPAAIGTYSQAIKAGNTVYVSGQIPLDPKTMELV EGFEEQTVQVFENLKAVIEASGGYLHDVAKLNIFLTDLSHFAKVNEIMGRYFTQPYPA RAAIGVAALPKGAQVEMDAIVVLE" misc_feature 6008404..6008772 /locus_tag="PA5339" /note="reactive intermediate/imine deaminase; Region: TIGR00004" /db_xref="CDD:129116" misc_feature order(6008449..6008454,6008461..6008463,6008467..6008469, 6008476..6008478,6008482..6008484,6008488..6008493, 6008608..6008610,6008614..6008619,6008623..6008625, 6008629..6008631,6008662..6008664,6008671..6008673, 6008698..6008721,6008749..6008751,6008755..6008757, 6008761..6008763) /locus_tag="PA5339" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100004" misc_feature order(6008449..6008451,6008650..6008652,6008662..6008664, 6008704..6008706,6008749..6008751) /locus_tag="PA5339" /note="putative active site [active]" /db_xref="CDD:100004" gene 6008833..6009564 /locus_tag="PA5340" /db_xref="GeneID:877609" CDS 6008833..6009564 /locus_tag="PA5340" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254027.1" /db_xref="GeneID:877609" /translation="MRRVIFLAAAATLLAGCAGTADPSGTWINQAAIDAASKDGKLRE ALLAYGPNLEWKLDSKAGEATFSNGFELGEGTLSKSDDEHWKVAFYGDDNQESLELDG KELIQQASANGPEQRFRRLDPQPAASSPAGSGFERALYGSYLKGSWKIREGQGQGGKV EFQANGLVSGLPGAERYALCLAGDCAAMSGDNDSIWLQQGNRGRELLFSLDDDELQLF EAVNTAGANEMPSYVPGKRVWLLER" gene complement(6009571..6010191) /locus_tag="PA5341" /db_xref="GeneID:877610" CDS complement(6009571..6010191) /locus_tag="PA5341" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254028.1" /db_xref="GeneID:877610" /translation="MFAAFVLVASTHFAALLSPGPDFFLLVRAALLRGRRQADGVAAG IALANLLSMLLVLGLLASVPDSAHSALRWLQALGGLYFLWLAGQALLAQRRLEMPAQR DVPSRGGYLRGLRDGLLASSLNPKLPIFYAGLFGVLARFSLPGWALALCLAWMSLAVL CWDMALVRLLDRPRWRGWLQRRVGALDRLCGVLLLALGGWLVLAAL" misc_feature complement(6009577..6010191) /locus_tag="PA5341" /note="Threonine/homoserine/homoserine lactone efflux protein [Amino acid transport and metabolism]; Region: RhtB; COG1280" /db_xref="CDD:440891" gene complement(6010258..6011058) /locus_tag="PA5342" /db_xref="GeneID:877611" CDS complement(6010258..6011058) /locus_tag="PA5342" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_254029.1" /db_xref="GeneID:877611" /translation="MAANRLLARPWLPGVELFHADFSGQAFGRHSHSAFAIGSILHGV GGYQCRGRRHALPAGTLSLMNPEEPHTGHAESERLVYRMLYVEETRLLGLLGRKQLPR GFGELNPADDGSVAAGLAWLAEDFQRSDALGLESRLLALLEQVFVRHGGLRPAAAAPR DGGTTARLRDYLEAHATEALGLDQLAQLLQRHPRHLIEAFRRAYGVPPHTYQLQCRVR QAKRLLLEERPLAELAQHLGFYDQAHFSTTFRRFTGVTPGQFRRSAKT" misc_feature complement(6010633..6011025) /locus_tag="PA5342" /note="AraC-like ligand binding domain; Region: AraC_binding; pfam02311" /db_xref="CDD:396749" misc_feature complement(6010276..6010521) /locus_tag="PA5342" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" gene complement(6011058..6011909) /locus_tag="PA5343" /db_xref="GeneID:878253" CDS complement(6011058..6011909) /locus_tag="PA5343" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254030.1" /db_xref="GeneID:878253" /translation="MSQTVMIAGCGDVGGRLGEALLADGWRVHGLRRSVDALPQGILP VAGDLQAPECPAQWPSEPLDYLVYSAAASQHDEAGYRAAYVDGLRHVLGWLQAHGQRP RRLLFVSSTGVYAQTDGGWIDEESPALSQAYSGRIMLDAEQVALDSGIPATRVRLAGI YGPGREWLLNQVRQGYRVVSEPPLYANRIHADDAAGLLAFLLRADAGGQALEDCYIGV DDAPVAMHEVVDYLRQRLGVSQWADEHSVRRAGSKRCSNRRARALGWVPRYPSYREGY AAVLGDA" misc_feature complement(6011118..6011897) /locus_tag="PA5343" /note="atypical (a) SDRs, subgroup 4; Region: SDR_a4; cd05266" /db_xref="CDD:187576" misc_feature complement(order(6011430..6011441,6011496..6011498, 6011508..6011510,6011580..6011588,6011697..6011705, 6011808..6011816,6011871..6011879,6011883..6011885)) /locus_tag="PA5343" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187576" gene 6012047..6012979 /gene="oxyR" /locus_tag="PA5344" /db_xref="GeneID:878254" CDS 6012047..6012979 /gene="oxyR" /locus_tag="PA5344" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_254031.1" /db_xref="GeneID:878254" /translation="MTLTELRYIVTLAQEQHFGRAAERCHVSQPTLSVGVKKLEDELG VLIFERSKSAVRLTPVGEGIVAQAQKVLEQAQGIRELAQAGKNQLAAPLKVGAIYTIG PYLFPHLIPQLHRVAPQMPLYIEENFTHILRDKLRTGELDAIIIALPFQEADVLTKPL FDEPFYVLMPADHPWTAKASIDSELLNDKSLLLLGEGHCFRDQVLEACPTVRKGDENK HTTVESSSLETIRHMVASGLGVSVLPFSAVDSHHYAPGVIEVRPFSAPVPFRTVAIAW RASFPRPRAIEVLADSIRLCSVARPQTQEQPQIA" misc_feature 6012053..6012232 /gene="oxyR" /locus_tag="PA5344" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 6012320..6012925 /gene="oxyR" /locus_tag="PA5344" /note="The C-terminal substrate-binding domain of the LysR-type transcriptional regulator OxyR, a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_OxyR; cd08411" /db_xref="CDD:176103" misc_feature order(6012353..6012355,6012362..6012367,6012374..6012376, 6012386..6012388,6012410..6012424,6012710..6012712, 6012719..6012724,6012731..6012733,6012740..6012745, 6012749..6012754) /gene="oxyR" /locus_tag="PA5344" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176103" gene 6012976..6015051 /gene="recG" /locus_tag="PA5345" /db_xref="GeneID:880937" CDS 6012976..6015051 /gene="recG" /locus_tag="PA5345" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase RecG" /protein_id="NP_254032.1" /db_xref="GeneID:880937" /translation="MTELSRVPVTALKGVGAALAEKLARVGLETLQDILFHLPLRYQD RTRVTAIGALRPGADAVVEGVVAGADVVMGRRRSLLVRLQDGSGTLSLRFYHFSQAQK DGLKRGTHLRCYGEVRPGASGLEIYHPEYRALNGDEPIPVEQTLTPIYPTTEGLTQQR LRQLSQQALAMLGPSSLPDWLPAELARDYQLGPLDQAIRYLHRPPPDADIEELAEGRH WAQLRLAFEELLTHQLSLQRLREAVRSQAAPRLPAASRLPKRFLANLGFQPTGAQRRV GAEIAYDLAQDEPMLRLVQGDVGAGKTVVAALAALQAIEAGYQVALMAPTEILAEQHF LNFSKWLQPLDIEVAWLAGKLKGKARAAALERIGDGAPMVVGTHALFQDEVKFKRLAL AIIDEQHRFGVQQRLALRQKGVDGRLCPHQLIMTATPIPRTLAMSAYADLDTSILDEL PPGRTPVNTVLVADSRRIEVIERVRAACREGRQAYWVCTLIEESEELTCQAAETTYEE LSSALGELRVGLIHGRMKPADKAVVMEAFKEGMLQLLVATTVIEVGVDVPNASLMIIE NPERLGLAQLHQLRGRVGRGSAASHCVLLYHPPLSQIGRERLGIMRETSDGFVIAEKD LELRGPGEMLGTRQTGLLQFKVADLMRDADLLPAVRDAAQSLLAHWPQHVSPLLERWL RHGQQYGQV" misc_feature 6012976..6015048 /gene="recG" /locus_tag="PA5345" /note="ATP-dependent DNA helicase RecG; Provisional; Region: PRK10917" /db_xref="CDD:236794" gene 6015141..6016550 /locus_tag="PA5346" /db_xref="GeneID:880938" CDS 6015141..6016550 /locus_tag="PA5346" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254033.1" /db_xref="GeneID:880938" /translation="MTEAALASADAPHAPQVILQLLAKLGIACREVSDSAELPAARRV QAVLLDDAVGTLLVLFPQSQLLDLARLTELTGRKLLAIKPERLERMLGKHELHRLPAL PPLTSSPCLYDERLLQEPRLLIESGQPGILLEIASNDFRGLLGKASAARFGEPLENIN LNLDRPDDDRAEISQAVQAFTARRIQQRLEQTIEIPPLPQTAQKIIKLRVDPNASVDD ITGLVETDPALAAQVVSWAASPYYAAPGKIRSVEDAIVRVLGFDLVINLALGLALGKS LSLPKDQPQQATPYWQQAIYTAAVIEGLTRAMPRELRPESGLSYLGGLLHNFGYLVLA HVFPPHFSLICRHLEVNPHLGHAYIEQHLLGITREQIGAWLMRVWDMPDDLYCALRFQ QDPSYTGPNAVYANLICLTNRLLRNSGIGDGTQQAIPAALYERLGITPEKAGDAVKKV LEAEAALRELAAQFNRLPG" misc_feature 6015225..6015569 /locus_tag="PA5346" /note="Aminoacyl-tRNA editing domain; Region: tRNA_edit; pfam04073" /db_xref="CDD:427693" misc_feature 6015696..6016448 /locus_tag="PA5346" /note="HD-like signal output (HDOD) domain, no enzymatic activity [Signal transduction mechanisms]; Region: HDOD; COG1639" /db_xref="CDD:441246" gene complement(6016622..6017014) /locus_tag="PA5347" /db_xref="GeneID:879641" CDS complement(6016622..6017014) /locus_tag="PA5347" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254034.1" /db_xref="GeneID:879641" /translation="MKFRLLLWMLGRLMAKASRDNPAFQKQLEGKDLVFQLHTLDGKV ARHYLVRDLRVSSKRGTHPQPAFSLGFKDGAYGFAAMTSKNPQLAFMQGIQNKDIQIQ GNPALVIWFQGLVKYLKPKKKAPEKKAA" gene complement(6017150..6017422) /locus_tag="PA5348" /db_xref="GeneID:879642" CDS complement(6017150..6017422) /locus_tag="PA5348" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="DNA-binding protein" /protein_id="NP_254035.1" /db_xref="GeneID:879642" /translation="MRKPELAAAIAEKADLTKEQANRVLNALLDEITGALNRKDSVTL VGFGTFLQRHRGARTGKNPQTGQPVKIKASNTVAFKPGKALRDAVN" misc_feature complement(6017153..6017422) /locus_tag="PA5348" /note="Bacterial nucleoid DNA-binding protein IHF-alpha [Replication, recombination and repair]; Region: HimA; COG0776" /db_xref="CDD:440539" gene complement(6017624..6018778) /locus_tag="PA5349" /db_xref="GeneID:879643" CDS complement(6017624..6018778) /locus_tag="PA5349" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="rubredoxin reductase" /protein_id="NP_254036.1" /db_xref="GeneID:879643" /translation="MSERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYS KPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQRIWIGEEEVRY RDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEF ANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGE GLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRGIVVDRSLRTSHANIYALG DCAEVDGLNLLYVMPLMACARALAQTLAGNPSQVAYGPMPVTVKTPACPLVVSPPPRG MDGQWLVEGSGTDLKVLCRDTAGRVIGYALTGAAVNEKLALNKELPGLMA" misc_feature complement(6017675..6018769) /locus_tag="PA5349" /note="NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; Region: NirB; COG1251" /db_xref="CDD:440863" gene complement(6018830..6018997) /gene="rubA2" /locus_tag="PA5350" /db_xref="GeneID:879561" CDS complement(6018830..6018997) /gene="rubA2" /locus_tag="PA5350" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="rubredoxin" /protein_id="NP_254037.1" /db_xref="GeneID:879561" /translation="MRKWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGV GKIDFEMIEIA" misc_feature complement(6018839..6018997) /gene="rubA2" /locus_tag="PA5350" /note="Flavorubredoxin [Inorganic ion transport and metabolism]; Region: NorV; COG1773" /db_xref="CDD:441379" gene complement(6019181..6019348) /gene="rubA1" /locus_tag="PA5351" /db_xref="GeneID:879562" CDS complement(6019181..6019348) /gene="rubA1" /locus_tag="PA5351" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="rubredoxin" /protein_id="NP_254038.1" /db_xref="GeneID:879562" /translation="MKKWQCVVCGLIYDEAKGWPEEGIEAGTRWEDVPEDWLCPDCGV GKLDFEMIEIG" misc_feature complement(6019190..6019348) /gene="rubA1" /locus_tag="PA5351" /note="Flavorubredoxin [Inorganic ion transport and metabolism]; Region: NorV; COG1773" /db_xref="CDD:441379" gene complement(6019482..6019883) /locus_tag="PA5352" /db_xref="GeneID:877709" CDS complement(6019482..6019883) /locus_tag="PA5352" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254039.1" /db_xref="GeneID:877709" /translation="MHSKPVLGREEVARVLGAAREEAQRQGWAVSIAVVDDGGHPLAL ERLDGCAPIGAYIATEKARSAALGRRETKRYEDMINGGRSAFLSVPLLQATLEGGVPI LVDGQVVGAVGVSGVRAEEDARVARIGAEGL" misc_feature complement(6019494..6019883) /locus_tag="PA5352" /note="hypothetical protein; Provisional; Region: PRK09732; cl01249" /db_xref="CDD:470133" gene complement(6019888..6021114) /gene="glcF" /locus_tag="PA5353" /db_xref="GeneID:877710" CDS complement(6019888..6021114) /gene="glcF" /locus_tag="PA5353" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycolate oxidase iron-sulfur subunit" /protein_id="NP_254040.1" /db_xref="GeneID:877710" /translation="MQTNLCDSARQRAEAAEAERILRSCVHCGFCNATCPTYQELGDE LDGPRGRIYLIKQFLERDEASERTRLHLDRCLSCRNCETTCPSGVEYHKLLDIGRDLL AERLPRGFRQRLLRDGLRLLAPRPGLFGALAGAAGRLRPLLPEAMQGKLPRRVAAPGR RPQPRHARRVLLLEGCVQPALSPNTNAAAARVLDRLGISVTPAAAAGCCGALDFHLDA QERGRQRARRNIDAWWPLLREGAEAIVQTASGCGAFVKDYAYLLRDDPRYADKAREVA AAARDLVEVLRDEPLESLGLRCDQRLAFHCPCTLQHAQRLGGAVEAVLRRLGFHLTEV ADGHLCCGSAGTYSLTQPALSQRLRDNRLDALESGAPDVIVTANVGCQAHLDGAGRTP VRHWIELLDQALPGGE" misc_feature complement(6019897..6021114) /gene="glcF" /locus_tag="PA5353" /note="glycolate oxidase subunit GlcF; Region: glcF; PRK11274" /db_xref="CDD:236890" gene complement(6021124..6022203) /gene="glcE" /locus_tag="PA5354" /db_xref="GeneID:877711" CDS complement(6021124..6022203) /gene="glcE" /locus_tag="PA5354" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycolate oxidase FAD binding subunit" /protein_id="NP_254041.1" /db_xref="GeneID:877711" /translation="MSQPYFDPDAGADHAGALLERVRDALARRAPLRIVGGDSKAFLG RPVAGEPLALAEHRGIVAYDPCELVITARAGTPLDELQAVLARGGQMLACEAPGFGGR ATVGGVLASGLSGPRRPWAGAVRDFVLGTRLISGLGTHLRFGGEVMKNVAGYDLSRLL AGSFGCLGVVTEVSFKVLPMPRCQAGLSLDLPVAMALRKLAEWGGQPLPISAACHDGE ALRLRLEGGEGSVRSARDRLGGEALDDGFWADLREQRLPFFDDPRPLWRLSLPALAPE TPLPGRQLLDWGGALRWLKSDAPAADIRAWTAAHGGHATCYRAGHLDAPFQPLSPGLL GLHRALKRQLDPQGIFNPGRMYAEL" misc_feature complement(6021127..6022167) /gene="glcE" /locus_tag="PA5354" /note="glycolate oxidase FAD binding subunit; Provisional; Region: glcE; PRK11282" /db_xref="CDD:236893" gene complement(6022203..6023702) /gene="glcD" /locus_tag="PA5355" /db_xref="GeneID:881631" CDS complement(6022203..6023702) /gene="glcD" /locus_tag="PA5355" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glycolate oxidase subunit GlcD" /protein_id="NP_254042.1" /db_xref="GeneID:881631" /translation="MNILYDERLDGPLPQVDKDGLLAELRLRLPDLELLHAAEDLRPY ECDGLSAYRCTPLLVALPERIEQVQGLLALCHRLKVPVVARGAGTGLSGGALPLENGV LLVMARFRRILEIDPLGRFARVQPGVRNLAISQAAAPHGLYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNLLQVDIVTLEGERLSLGSSALDSAGFDLLALFTGSEGLLG VVVEVTVRLLPRPPVAKVLLASFDDVESAGRAVADLIGAGIVPAGLEMMDNLSIRAAE DFIHAGYPVDAAAILLCELDGVEADVHEDCERVRELFEAAGATSVRQAQDEAERQRFW AGRKNAFPAVGRISPDYYCMDGSIPRRELPRVLHGIAELSREYGLRVANVFHAGDGNM HPLILFDANLAGELERAEALGGRILELCVAVGGSITGEHGVGREKINQMCAQFNADEL TLFHAVKAAFDPAGLLNPGKNVPTLHRCAEFGAMHVHHGRLPFPELERF" misc_feature complement(6022206..6023702) /gene="glcD" /locus_tag="PA5355" /note="glycolate oxidase subunit GlcD; Provisional; Region: PRK11230" /db_xref="CDD:183043" gene 6023907..6024662 /gene="glcC" /locus_tag="PA5356" /db_xref="GeneID:881632" CDS 6023907..6024662 /gene="glcC" /locus_tag="PA5356" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional regulator GlcC" /protein_id="NP_254043.1" /db_xref="GeneID:881632" /translation="MQKQRVADQVAERIERLIVDGVLKVGQALPSERRLVAKLGCSRS ALREGLRALRGRGIIDTEHGRGSFVADLDRNADVSPLMHLFGSQPRTLYDLLEVRALL EGEAARLAALRGTEADFVLLARRYEEMLASHEETQPIDPREHARRDHAFHRAISEASH NPVLVHTLQSLNELLLSTVFASVNNLYHRPPQKRQIDRQHARLYAALRERQPDQAQRA AREHIHSIRDNLREIEQEEQRLVRATLRLNGWG" misc_feature 6023907..6024653 /gene="glcC" /locus_tag="PA5356" /note="DNA-binding transcriptional regulator GlcC; Provisional; Region: PRK09990" /db_xref="CDD:182186" gene 6024742..6025278 /locus_tag="PA5357" /db_xref="GeneID:880316" CDS 6024742..6025278 /locus_tag="PA5357" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254044.1" /db_xref="GeneID:880316" /translation="MPSNALWLRADQLSSVSPAVLDWLFDEGSLTRRLTALADGAFRV EPLLEGWQTLRDDECQGLDVPTGSSGWVREVYLHGHDRPWVFARSVAARSALEGSGFD LALLGTRSLGELLFSDSAFERGPIEVCRYPAAGLPAEVRAEGLWGRRSRFSRGALGVL VAEVYLPRLWDQAGIADV" misc_feature 6024742..6025266 /locus_tag="PA5357" /note="Chorismate lyase; Region: Chor_lyase; pfam04345" /db_xref="CDD:113128" gene 6025305..6026195 /gene="ubiA" /locus_tag="PA5358" /db_xref="GeneID:880317" CDS 6025305..6026195 /gene="ubiA" /locus_tag="PA5358" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="4-hydroxybenzoate octaprenyltransferase" /protein_id="NP_254045.1" /db_xref="GeneID:880317" /translation="MFVTLIKPLARLHPRAWDFVQLVRLDRPIGIYLLLWPTLWSLWI AADGVPELKNLLIFVLGVILMRAAGCVINDFADRNFDGHVARTKARPLATGKISVREA WITFAVLVALSFGLVLLTNATTVWLSFGAVAVASLYPFMKRYTYYPQVVLGAAYSWGI LMAFTAERGELPASAWLLFLANVLWTVAYDSYYAMTDREDDLKIGIKSTAILFGDADR LIIGSLQGLTLLLLVLAGNRFELGLCFYLGLAVAAACFVWEAWSTRDRDPQACFRAFL HNHWAGLAIFLGTVADYALR" misc_feature 6025374..6026180 /gene="ubiA" /locus_tag="PA5358" /note="4-Hydroxybenzoate polyprenyltransferase; Region: PT_UbiA_COQ2; cd13959" /db_xref="CDD:260122" gene complement(6026219..6026674) /locus_tag="PA5359" /db_xref="GeneID:878437" CDS complement(6026219..6026674) /locus_tag="PA5359" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254046.1" /db_xref="GeneID:878437" /translation="MLNRFRCRPCGRRTLHLKTQERDAMNRIHLALGLALALPAFAAL AQETVAPATEKDGVLVDGKGMTLYTYDKDSEGQSACSGQCAKNWPPLAAAQGAQASGD WSLVAREDGTQQWAYYGKPLYTFIQDKKPGDKNGDGKMGAWHVAQPDMD" misc_feature complement(6026228..6026527) /locus_tag="PA5359" /note="Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown) [Function unknown]; Region: COG4315" /db_xref="CDD:443456" gene 6026779..6027468 /gene="phoB" /locus_tag="PA5360" /db_xref="GeneID:878438" CDS 6026779..6027468 /gene="phoB" /locus_tag="PA5360" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component response regulator PhoB" /protein_id="NP_254047.1" /db_xref="GeneID:878438" /translation="MVGKTILIVDDEAPIREMIAVALEMAGYECLEAENTQQAHAVIV DRKPDLILLDWMLPGTSGIELARRLKRDELTVDIPIIMLTAKGEEDNKIQGLEVGADD YITKPFSPRELVARLKAVLRRTGPGDSEAPIEVGGLLLDPISHRVTIDGKPAEMGPTE YRLLQFFMTHQERAYTRGQLLDQVWGGNVYVEERTVDVHIRRLRKALGEVYENLVQTV RGTGYRFSTKS" misc_feature 6026782..6027456 /gene="phoB" /locus_tag="PA5360" /note="phosphate regulon transcriptional regulatory protein PhoB; Region: PhoB; TIGR02154" /db_xref="CDD:131209" misc_feature order(6026818..6026820,6026827..6026832,6026839..6026841, 6026851..6026853,6027097..6027108) /gene="phoB" /locus_tag="PA5360" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:381133" gene 6027542..6028873 /gene="phoR" /locus_tag="PA5361" /db_xref="GeneID:878511" CDS 6027542..6028873 /gene="phoR" /locus_tag="PA5361" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="two-component sensor PhoR" /protein_id="NP_254048.1" /db_xref="GeneID:878511" /translation="MQSVVNQDWRGALIRHLLLVLAASLVLGVVSGHYGWALALGLAL YLGWTLWQLLRLHQWLRNHQPDEPPPDSYGLWGEVFDNIYHLQRRNQRARGRLQAVID RIQESTAALRDAVIMLDSDGNLEWWNLAAENLLGLKTPQDGGQPVSNLIRHPRFKEYF DQEDYREPLEIPSPINERLRLQFHITLYGNREHLMLVRDVTRVHQLEQMRKDFVANVS HELRTPLTVIAGYLETLLDNVEDVNPRWLRALQQMQQQAGRMQNLLNDLLLLAKLEAT DYPGDNKPVAVDALLASIRNDAQALSAGRNHRISLDAAPAVQLKGSEAELRSAFSNLV FNAVKYTPDEGEIRIRWWADEQGAHLSVQDTGIGVDPKHLPRLTERFYRVDSSRASNT GGTGLGLAIVKHVLIRHRARLEISSVPGKGSTFTCHFAPAQVAEAERKAPK" misc_feature <6027683..6027823 /gene="phoR" /locus_tag="PA5361" /note="Phosphate regulon sensor protein PhoR; Region: PhoR; pfam11808" /db_xref="CDD:432090" misc_feature 6027830..6028828 /gene="phoR" /locus_tag="PA5361" /note="phosphate regulon sensor kinase PhoR; Region: phoR_proteo; TIGR02966" /db_xref="CDD:274368" gene 6028976..6030316 /locus_tag="PA5362" /db_xref="GeneID:878512" CDS 6028976..6030316 /locus_tag="PA5362" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254049.1" /db_xref="GeneID:878512" /translation="MDPSPSTSIATYFADAGLILFALFLVLLNGFFVAAEFAMVKLRA TRVETIAKQHGWRGTILRKVHNQLDAYLSACQLGITLASLGLGWVGEPAFAELLEPLL AMIGVHSDELIRGISFFTAFFIISYLHIVVGELAPKSWAIRKPELLSLWTAVPLYLFY WLMYPAIWLLNASANAILKIAGQGEPGPHHEHHYSRDELKLILHSSRAQDPSDQGMRV LASAVELGELEVVDWANSREDLVYLEHDAPLADILAVIRRHKYSRYPVWDSHKGEFIG LLHIKDLLLALSALDSLPETFDLDELVRPLEIVTKHTPLSRLLEQFRKGGAHFAVVEE ADHKVVGFLTMEDVLEVLVGDIQDEHRKTERGILAYQPGKLLVRGDTPLFKLERLLGI DLDHVEADTLAGLVYDTLKRVPEEEEVLDTEGLRIIVKKMRGPKIVLAKVVKLD" misc_feature 6029027..6030313 /locus_tag="PA5362" /note="Hemolysin-related protein, contains CBS domains, UPF0053 family [General function prediction only]; Region: TlyC; COG1253" /db_xref="CDD:440865" gene complement(6030351..6031250) /locus_tag="PA5363" /db_xref="GeneID:877814" CDS complement(6030351..6031250) /locus_tag="PA5363" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254050.1" /db_xref="GeneID:877814" /translation="MLGRLLLLCGLFAAAAPAAALTIYKYTDANGVVTYSDRAVAGAQ VFVFRDRMVEHLEREVKLETKKHAGGETLQVRNDLYAPVEVELRIRNPRNAVGVPDGP IRWVVPARSQVRLATLAPRKAGKPMSYTPKLRYALGDPRQQPLLYRYPLPWRGGPFRL SQGANGKYSHFTPKGRYAMDIAMPEGTPIIAARGGTVVKIENNQSGRGNNPSGNFVRI LHDDGTMGVYLHLMRHSVLVAEGQRVQVGTPLARSGNTGNSSGPHLHFVIQRNVGLAL ESIPYDFAQPVDSLPNFAIVREP" misc_feature complement(<6031116..>6031187) /locus_tag="PA5363" /note="Domain of unknown function (DUF4124); Region: DUF4124; pfam13511" /db_xref="CDD:433269" misc_feature complement(6030438..6030905) /locus_tag="PA5363" /note="Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain [Cell wall/membrane/envelope biogenesis]; Region: NlpD; COG0739" /db_xref="CDD:440502" gene complement(6031366..6032268) /locus_tag="PA5364" /db_xref="GeneID:877815" CDS complement(6031366..6032268) /locus_tag="PA5364" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_254051.1" /db_xref="GeneID:877815" /translation="MSKVSALVVDDAPFIRDLMKKGLRDNFPGLHIEEAVNGRKAQQL LSRQNVDLILCDWEMPEMSGLELLTWCRAQENLKTTPFIMVTSRGDKENVVQAIQAGV SDYIGKPFSNDQLVAKIKKALSRSGKLEALAAHAPRREIASGMANDSLAALTGGRAEV IKPAASPAKPAPAPKPASAPQASARPAGSGNPLGQAQLRLPQSSMPCVIKAVSLKEAQ LVVKRADPLPQVLESAVLDLEENSDVARLNGYLHAIAALEPKPDSDWLLLTLRFVDRD PQKLDYLSRLIARGSTQKHYVPGA" misc_feature complement(6031900..6032259) /locus_tag="PA5364" /note="phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs); Region: REC; cl19078" /db_xref="CDD:473134" misc_feature complement(order(6031948..6031950,6031954..6031965)) /locus_tag="PA5364" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:381085" gene complement(6032387..6033115) /gene="phoU" /locus_tag="PA5365" /db_xref="GeneID:881627" CDS complement(6032387..6033115) /gene="phoU" /locus_tag="PA5365" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phosphate uptake regulatory protein PhoU" /protein_id="NP_254052.1" /db_xref="GeneID:881627" /translation="MINKDSLTHHISQQFNAELEDVRSHLLAMGGLVEKQVNDAVNAL IDADSGLAQQVREIDDQINQMERNIDEECVRILARRQPAASDLRLIISISKSVIDLER IGDEASKVARRAIQLCEEGESPRGYVEVRHIGSQVQKMVQEALDAFARFDADLALSVA QYDKTVDREYKTALRELVTYMMEDPRAISRVLNIIWALRSLERIGDHARNIAELVIYL VRGTDVRHIGLTRMKEEVENNRGE" misc_feature complement(6032408..6033100) /gene="phoU" /locus_tag="PA5365" /note="phosphate signaling complex protein PhoU; Region: PRK11115" /db_xref="CDD:182974" gene complement(6033211..6034044) /gene="pstB" /locus_tag="PA5366" /db_xref="GeneID:881628" CDS complement(6033211..6034044) /gene="pstB" /locus_tag="PA5366" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter ATP-binding protein" /protein_id="NP_254053.1" /db_xref="GeneID:881628" /translation="MQNETASHGINFDALGRDRQSLDLASESVELEVPGLNLFYGAKQ ALFDVRMNIPKQRVTAFIGPSGCGKSTLLRCFNRMNDLVDGCRVEGEIRLDGHNIFAK GVDVAELRRRVGMVFQKPNPFPKSIYENVVYGLRIQGINKKRVLDEAVEWALKGAALW EEVKDRLHESALGLSGGQQQRLVIARTIAVEPEVLLLDEPCSALDPISTLKIEELIYE LKSKFTIVIVTHNMQQAARVSDYTAFMYMGKLIEFGDTDTLFTNPAKKQTEDYITGRY G" misc_feature complement(6033214..6033984) /gene="pstB" /locus_tag="PA5366" /note="ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]; Region: PstB; COG1117" /db_xref="CDD:440734" gene complement(6034060..6035736) /gene="pstA" /locus_tag="PA5367" /db_xref="GeneID:881629" CDS complement(6034060..6035736) /gene="pstA" /locus_tag="PA5367" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter permease" /protein_id="NP_254054.1" /db_xref="GeneID:881629" /translation="MKQKQETVKAWFGSGSPWVWMNAGAVSIAVIMTIGLLAVIAVRG LGHFWPANVIEATYQIPGEAAKTVIGEVVQAEEVPRTRLRSAGMPVPEAGPEFMTREL LKLGNRELYGSDFSWVVGEWLQDIKRPEALMVLERREWGNFYGYLLSVKENGQVVAEG DAAVGELQKRMQRVDDLYAKLYKLEKGDIGGINHGLERLRLKERKLQLDGKLDAAAQA DLAAERSELQARYKVLEEQLNGLHQEFNRDSVVMRDASGRESEITLGKLVHAYQPNAM GLGTKMTVYFKKLWEFLSDDPREANTEGGIFPAIFGTVMMTLVMALIVTPFGVIAAVY LREYAKQGPLTRVIRIAVNNLAGVPAIVYGVFGLGFFVYVLGGSIDRLFFPEALPAPT FGTPGLFWASLTLAILAVPVVIVATEEGLARIPRAVREGSLALGATKAETLWKIVLPM ASPAMMTGLILAVARAAGEVAPLMLVGVVKLAPSLPVDGNYPYVHLDQKIMHLGFHIY DVGFQSPNVEAARPLVYATALLLVVVIALLNFSAIAIRNRLREKYKALEN" misc_feature complement(6034078..6035715) /gene="pstA" /locus_tag="PA5367" /note="ABC-type phosphate transport system, auxiliary component PstA [Inorganic ion transport and metabolism]; Region: PstA; COG4985" /db_xref="CDD:444009" gene complement(6035756..6037789) /gene="pstC" /locus_tag="PA5368" /db_xref="GeneID:880527" CDS complement(6035756..6037789) /gene="pstC" /locus_tag="PA5368" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter permease" /protein_id="NP_254055.1" /db_xref="GeneID:880527" /translation="MQQAQVPLLLSIEEQNQVGMRVGGQGEILFFNAKTGVELKRVAL PLPAGSEIRSIAQDQPGSPTVALGLSNGQVLVFQHTYKVTYPDNKKTITPEIAFPYGE TPIGLDPQGRPLEHVSINAGDDSLLLAGSVDKQLLLLSMTREENMLTGESTLDEERIE LPQIAEPVKAIYLDPRKQWLYVINGRATADVFDLHSRQLNGRYKLLEDPNAEVTASTQ LLGGISLLVGDSKGGIAQWFMARDTDGEPRLSHVRDFNLDGAPISAIAPEQRRKGFIA LDEKGNLGVFHSTAHRTLLVQPVADSSGVITLSPRANRLLLEQGGKIHRFALSNPHPE ISWSALWGKVWYESYDKPAYVWQSTAATTDFEPKLSLSPLTFGTLKAAFYAMILAAPL AIAAAVYTAYFMAPAMRRKVKPVIELMEALPTVILGFFAGLFLAPYVEGHLPGVFSLL LLTPLGILLAGLLWSRLPERIRLSLPAGWEAALLIPVVLAVGAFALWLSPHLETTFFG GDMRLWLSHDLGITYDQRNALIVGLAMGFAVIPNIFSIAEDAIFSVPRSLTYGSLALG ATPWQTLTRVVILTASPGIFSALMIGMGRAVGETMIVLMATGNTPVMEVNIFEGMRTL AANVAVEMPESEVGGSHYRVLFLSALVLLTFTFVMNTLAELIRQRLRKKYASL" misc_feature complement(6035759..6037786) /gene="pstC" /locus_tag="PA5368" /note="ABC-type uncharacterized transport system, permease component [General function prediction only]; Region: COG4590" /db_xref="CDD:443647" protein_bind complement(6037970..6037982) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" protein_bind complement(6037981..6037993) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(6038212..6039183) /gene="pstS" /locus_tag="PA5369" /db_xref="GeneID:880528" CDS complement(6038212..6039183) /gene="pstS" /locus_tag="PA5369" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter substrate-binding protein" /protein_id="NP_254056.1" /db_xref="GeneID:880528" /translation="MKLKRLMAALTFVAAGVGAASAVAAIDPALPEYQKASGVSGNLS SVGSDTLANLMTMWAEEYKRLYPNVNIQIQAAGSSTAPPALTEGTANLGPMSRKMKDV ELQAFEQKYGYKPTAVPVAVDALAIFVHKDNPIKGLTMQQVDAIFSATRLCGSKQDVK TWGDLGLTGDWAKKPVQLFGRNSVSGTYGYFKEEALCKGDFRPNVNEQPGSASVVQSV SQSLNGIGYSGIGYKTASVKTVALAKKEGAAFVEDNEQNALNGTYPLSRFLYVYVNKA PNKPLDPLEAQFLKLVLSKTGQQVVVKDGYIPLPAKVAEKAIKELGL" misc_feature complement(6038257..6039183) /gene="pstS" /locus_tag="PA5369" /note="phosphate binding protein; Region: ptsS_2; TIGR02136" /db_xref="CDD:273991" misc_feature complement(order(6038551..6038553,6038620..6038631, 6038641..6038643,6038896..6038898,6039040..6039042)) /gene="pstS" /locus_tag="PA5369" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270284" gene complement(6039584..6039703) /locus_tag="PA5369.1" /db_xref="GeneID:3240256" rRNA complement(6039584..6039703) /locus_tag="PA5369.1" /product="5S ribosomal RNA" /db_xref="GeneID:3240256" gene complement(6039846..6042736) /locus_tag="PA5369.2" /db_xref="GeneID:3240205" rRNA complement(6039846..6042736) /locus_tag="PA5369.2" /product="23S ribosomal RNA" /db_xref="GeneID:3240205" gene complement(6042963..6043038) /locus_tag="PA5369.3" /db_xref="GeneID:3240261" tRNA complement(6042963..6043038) /locus_tag="PA5369.3" /product="tRNA-Ala" /db_xref="GeneID:3240261" gene complement(6043067..6043143) /locus_tag="PA5369.4" /db_xref="GeneID:3240277" tRNA complement(6043067..6043143) /locus_tag="PA5369.4" /product="tRNA-Ile" /db_xref="GeneID:3240277" gene complement(6043208..6044743) /locus_tag="PA5369.5" /db_xref="GeneID:3240272" rRNA complement(6043208..6044743) /locus_tag="PA5369.5" /product="16S ribosomal RNA" /db_xref="GeneID:3240272" gene complement(6045310..6046626) /locus_tag="PA5370" /db_xref="GeneID:878571" CDS complement(6045310..6046626) /locus_tag="PA5370" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_254057.1" /db_xref="GeneID:878571" /translation="MPSANAPEAPAQRPLTRSDYKTLSLSALGGALEFYDFIIFVFFA TVVGKLFFPADMPEWLRQLQTFGLFAAGYLARPLGGVIMAHFGDLLGRKRMFTLSIFM MAVPTLIMGLLPTYAQIGIWAPLALLLLRVIQGAAIGGEVPGAWVFVAEHVPARHVGY ACGTLTSGLTAGILLGSLVATAINSFYSATEVQDYAWRIPFLLGGVFGLFSVYLRRWL HETPVFAELQQRKALAEEVPLKAVVRDHRGAVLVSMLLTWVLSAAIVVVILMTPTVLQ SVYGFDAATALKANSLAIVCLTLGCIVAGRMADRYGAGLTFVAGSVLLALVSWSFYGN LKAHPDWLFPLYALTGFFVGIVGAVPYVMVNAFPPVVRFSGLSFSYNLAYAIFGGLTP MAVALLLKQSPMGPAYYVVTLCLVGFLVGLYLLAQKKPAGEAVSVG" misc_feature complement(6045361..6046566) /locus_tag="PA5370" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" misc_feature complement(order(6045466..6045468,6045475..6045480, 6045487..6045492,6045499..6045501,6045547..6045549, 6045559..6045561,6045565..6045567,6045724..6045726, 6045736..6045738,6045820..6045822,6045829..6045837, 6045844..6045849,6045856..6045858,6046108..6046110, 6046117..6046122,6046129..6046131,6046189..6046191, 6046198..6046206,6046210..6046215,6046387..6046389, 6046504..6046506,6046513..6046518,6046525..6046530)) /locus_tag="PA5370" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:349949" gene 6046914..6047318 /locus_tag="PA5371" /db_xref="GeneID:881123" CDS 6046914..6047318 /locus_tag="PA5371" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="acyl-CoA thioesterase" /protein_id="NP_254058.1" /db_xref="GeneID:881123" /translation="MIELEQEDPIPQGDLALQITALPRETNGFGDIYGGWLVSQMDLA GTAMASKIAGGRIATVAIDRMAFMVPVAVGAQLSFYTQTLEVGRSSIRMLVEVWSDDP LSSEWRKVTEAVFVFVAIDGSGRTRPVPPRRG" misc_feature 6046938..6047306 /locus_tag="PA5371" /note="Acyl-CoA hydrolase [Lipid transport and metabolism]; Region: YciA; COG1607" /db_xref="CDD:441215" gene complement(6047364..6049049) /gene="betA" /locus_tag="PA5372" /db_xref="GeneID:881124" CDS complement(6047364..6049049) /gene="betA" /locus_tag="PA5372" /EC_number="1.1.99.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="choline dehydrogenase" /protein_id="NP_254059.1" /db_xref="GeneID:881124" /translation="MSQEFDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRFD FRTQMPAALAFPLQGRRYNWAYETDPEPYMNNRRMECGRGKGLGGSSLINGMCYIRGN ALDFDGWAKEPGLEDWSYLDCLPYFRKAETRDIGPNDYHGGDGPVSVTTPKAGNNPLF HAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPEGRRAATGRGYLDQARGRPNLTI VTHALSDRILFSGKRAIGVSYLVGNGDNPVTAHARREVLVCSGAIASPQLLQRSGVGP AALLRDLDIPVVHDLPGVGANLQDHLELYLQYACKQPVSIYPATKWWNQPAIGAQWLF LGKGLGASNQFEAGGFIRTREAFEWPNIQFHFLPVAINYNGSKGVQEHGFQAHMGSMR SPSRGRIHLKSRDPRQHPSILFNYMSHEQDWQEFRDGIRLTREIMNQPALDPYRGREL SPGVSVQSDAELDEFIRNHAETAFHPSCSCKMGSDDMAVVDGQGRVHGMEGLRVVDAS IMPLIITGNLNATTIMMAEKIADRIRGRQPLPRSTAKYYVAGDAPVRGNPVRA" misc_feature complement(6047367..6049049) /gene="betA" /locus_tag="PA5372" /note="choline dehydrogenase; Validated; Region: PRK02106" /db_xref="CDD:235000" gene complement(6049185..6050657) /gene="betB" /locus_tag="PA5373" /db_xref="GeneID:881619" CDS complement(6049185..6050657) /gene="betB" /locus_tag="PA5373" /EC_number="1.2.1.8" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="betaine aldehyde dehydrogenase" /protein_id="NP_254060.1" /db_xref="GeneID:881619" /translation="MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASRE DVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETR SVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIAL WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTE HPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVM ANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHM ESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPV MSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAE MPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDYASVF" misc_feature complement(6049188..6050657) /gene="betB" /locus_tag="PA5373" /note="betaine aldehyde dehydrogenase; Provisional; Region: PRK13252" /db_xref="CDD:183918" misc_feature complement(order(6049209..6049214,6049218..6049235, 6049269..6049271,6049275..6049277,6049284..6049286, 6049290..6049292,6049302..6049304,6049308..6049310, 6049332..6049337,6049341..6049352,6049356..6049358, 6049365..6049367,6049371..6049376,6049383..6049394, 6049686..6049688,6049731..6049733,6049830..6049835, 6049842..6049844,6049851..6049853,6049917..6049919, 6049953..6049955,6050235..6050243,6050247..6050249, 6050271..6050285,6050304..6050306,6050316..6050318, 6050418..6050420,6050427..6050429,6050439..6050441, 6050448..6050450,6050460..6050462,6050466..6050468)) /gene="betB" /locus_tag="PA5373" /note="tetrameric interface [polypeptide binding]; other site" /db_xref="CDD:143409" misc_feature complement(order(6049299..6049301,6049491..6049493, 6049497..6049499,6049800..6049802,6049896..6049904, 6049959..6049961,6049968..6049973,6049977..6049979, 6050034..6050036,6050130..6050132,6050199..6050204, 6050208..6050213)) /gene="betB" /locus_tag="PA5373" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:143409" misc_feature complement(order(6049800..6049802,6049809..6049811, 6049902..6049904,6050199..6050201)) /gene="betB" /locus_tag="PA5373" /note="catalytic residues [active]" /db_xref="CDD:143409" gene complement(6050718..6051311) /gene="betI" /locus_tag="PA5374" /db_xref="GeneID:881620" CDS complement(6050718..6051311) /gene="betI" /locus_tag="PA5374" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="BetI family transcriptional regulator" /protein_id="NP_254061.1" /db_xref="GeneID:881620" /translation="MPKVGMQPIRRSQLIHATLEAVDQVGMGDASIALIARLAGVSNG IISHYFQDKNGLLEATMRHLLSALSKAVRERRAALYDDSPRAHLRAIVEGNFDDSQVN GPAMKTWLAFWATSMHQPALRRLQRVNDHRLYSNLCYQFRRQLSADDARAAARGLAAL IDGLWLRGALTGDAFDTDEALNIAYDYLDQQLAKQSG" misc_feature complement(6050721..6051311) /gene="betI" /locus_tag="PA5374" /note="transcriptional regulator BetI; Validated; Region: PRK00767" /db_xref="CDD:179115" gene 6051644..6053194 /gene="betT1" /locus_tag="PA5375" /db_xref="GeneID:880283" CDS 6051644..6053194 /gene="betT1" /locus_tag="PA5375" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="choline transporter BetT" /protein_id="NP_254062.1" /db_xref="GeneID:880283" /translation="MFFGSTALILVLTAALILYPDSAGALLGRIQEWLSHSFGWYYML AIGAYLFFVAWVAFSRFGTLKLGEEHEKPDFSYGAWAGMLFSSGIGISLLYFAASEPI DHLYHPPEGVPGSPQAARQALQLTFLHWGLHGWAIYALVGLAVGYFAYRHRQPLALRS ALYPILGERWVKGAAGHAVDCFGIFVTLLGLVTNLGIGALQVSSGLEYLTGMPHSKGT LLAVILAMSLVATLAAVSGVEKGIRRLSNLNIVLFSSLLLFVLVCGSTLELLNGFVQN LGDYLDGLVLKTFDLYVYTGAGAGKSEEWLGLWTLFYWAWWISWAPFVGMFIARISRG RSVRELVCGVLLIPLGFTLAWLSVFGNSALDLVMNHGATDLGKAALEQPSMSIYLLLE HYPLSKIVIGLSIFVGFVLFLTPADSGSVMLANLSRSGGELDEDAPNWLRILWSAVVT LVTIGLLFAGNFTAMQTVVVLAGLPFSAVLILFMFGLHKAMRADYEAQVGDRRTYQPV PAPTQPQT" misc_feature 6051647..6053155 /gene="betT1" /locus_tag="PA5375" /note="Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis]; Region: BetT; COG1292" /db_xref="CDD:440903" gene complement(6053412..6054590) /locus_tag="PA5376" /db_xref="GeneID:880284" CDS complement(6053412..6054590) /locus_tag="PA5376" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_254063.1" /db_xref="GeneID:880284" /translation="MTAIRFDHVDVIFGTHTKEALKLLDQGLGRAEILKRTGQVLGVE DACLDVNRGEICVLMGLSGSGKSSLLRCINGLNKVSRGKLLIEHEGSQVDIANCSPAT LKAMRTKRIAMVFQKFALMPWLTVAENVGFGLEMQGRPAAERKKLIDEKLELVGLSQW RDKRPDSLSGGMQQRVGLARALAMDGDILLMDEPFSALDPLIRQQLQDELLVLQRQLH KTIVFVSHDLDEALKIGTRIAIMKDGRIIQHGKPEEIVLSPADDYVRTFVAHTNPLNV LCGQSLMRGLDQCIRQNDEICFDQGRDCWIGLSEGDVLKGARQGSNVIDLQRWRQGDP VEKLRREPTLVDVSIRMRDALQIRYQTGHKLVLQEQDRVVGVLGDSELYHALLGKNLG " misc_feature complement(6053424..6054581) /locus_tag="PA5376" /note="choline ABC transporter, ATP-binding protein; Region: ABC_choXWV_ATP; TIGR03415" /db_xref="CDD:188317" gene complement(6054594..6055433) /locus_tag="PA5377" /db_xref="GeneID:878443" CDS complement(6054594..6055433) /locus_tag="PA5377" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_254064.1" /db_xref="GeneID:878443" /translation="MFLTDHKLPLGEQIAGFVDWLTLHGASFFDKISDTLEFLIHGVT NGLLWFNPLVLIALLVGLVHFIQRSWGLTVFALASLLLILNLGYWQETMETLAQVIFA TLVCIAVGVPLGIVAAHKPWFYTALRPLLDLMQTVPTFVYLIPTLTLFGLGVVPGLIS TVIFAVAAPIRLTCLGIQDVPAELLDAGKAFGCSRWQLLTRIELPHAMPSIAAGITQC IMLSLSMVVIAALVGADGLGKPVVNALNTADISLGFEAGLAIVLLAILLDRVCKQRAV KGK" misc_feature complement(6054621..6055421) /locus_tag="PA5377" /note="choline ABC transporter, permease protein; Region: ABC_choXWV_perm; TIGR03416" /db_xref="CDD:188318" misc_feature complement(order(6054666..6054671,6054699..6054704, 6054741..6054746,6054753..6054764,6054783..6054785, 6054792..6054797,6054837..6054839,6054888..6054890, 6054897..6054902,6054909..6054911,6054915..6054920, 6054927..6054929,6054933..6054935,6054939..6054944, 6054993..6054995,6054999..6055004,6055011..6055040, 6055044..6055055,6055080..6055082,6055095..6055100, 6055107..6055112)) /locus_tag="PA5377" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119394" misc_feature complement(order(6054747..6054764,6054993..6055037)) /locus_tag="PA5377" /note="conserved gate region [active]" /db_xref="CDD:119394" misc_feature complement(order(6054669..6054671,6054699..6054701, 6054708..6054710,6054744..6054746,6054957..6054959, 6054993..6054995)) /locus_tag="PA5377" /note="putative PBP binding loops [active]" /db_xref="CDD:119394" misc_feature complement(order(6054816..6054818,6054828..6054833, 6054849..6054887)) /locus_tag="PA5377" /note="ABC-ATPase subunit interface [active]" /db_xref="CDD:119394" gene complement(6055475..6056413) /locus_tag="PA5378" /db_xref="GeneID:878444" CDS complement(6055475..6056413) /locus_tag="PA5378" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254065.1" /db_xref="GeneID:878444" /translation="MKGCKSWLLAVSLCAPLAAQAAEPESCASVRFADVGWTDITVTT AVTRQVLESLGYKTKVNLLSVPVTYRSLANNDLDVFLGNWMPTMTNDIKQYAEKGTVE TLRANLEGAKYTLAVPQYVYDGGLRSFADIAKFSDKLGNKIYGIEPGNDGNRVAQSMI DKNAFELGKFKLVESSEAGMLSQVQRAIRRNQWVVFLGWEPHPMNTRFQMKYLEGGDD FFGPNYGGATIYTNVRKGYAQECANVGQLLKNLSFTLEMENKLMDAVLNENKKPEEAA KAWLKDHPEQLDAWLAGVTTRDGQPAAAAAKLAFAK" misc_feature complement(6055511..6056353) /locus_tag="PA5378" /note="choline ABC transporter, periplasmic binding protein; Region: ABC_choline_bnd; TIGR03414" /db_xref="CDD:188316" misc_feature complement(order(6055817..6055819,6055961..6055966, 6055976..6055978,6056075..6056077,6056162..6056164, 6056297..6056299,6056303..6056305)) /locus_tag="PA5378" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:270358" misc_feature complement(order(6055667..6055669,6055676..6055681, 6055688..6055690)) /locus_tag="PA5378" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:270358" gene 6056877..6058253 /gene="sdaB" /locus_tag="PA5379" /db_xref="GeneID:878445" CDS 6056877..6058253 /gene="sdaB" /locus_tag="PA5379" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="L-serine dehydratase" /protein_id="NP_254066.1" /db_xref="GeneID:878445" /translation="MAISVFDLFKIGIGPSSSHTVGPMRAAALFTAALRQRQALSAVR RLEVRLYGSLSATGVGHGTDRAVIMGLMGEWPDRIDPTQIAPRMAALLDSGLLQLDGR VAVPFDWVRDMRLLDENLPYHPNAMTLVAYGEQGELHQETYYSVGGGFVVDAAQAASG QLDQDHTVLPYDFSSAEELLLLCKRHNLRVSELMLANERIWRSETDIREGLRRIWQAM RDCVDNGLRNEGILPGGLNVQRRAARLHRNLQEIGKPNVIGSTLSAMEWVNLFALAVN EENAAGGRMVTAPTNGAAGIIPAVLHYYMKFNPDAQDRDVVDYLLAAAAVGILCKKNA SISGAEVGCQGEVGSACAMAAAGLAEVLGATPAQVENAAEIGLEHNLGLTCDPVGGLV QVPCIERNAIAAVKAINAAQMALRGDGQHFISLDKVIRTMRDTGADMHDKYKETSRGG LAVNAIEC" misc_feature 6056883..6058241 /gene="sdaB" /locus_tag="PA5379" /note="Serine dehydratase alpha chain; Region: SDH_alpha; cl27283" /db_xref="CDD:452735" protein_bind complement(6058462..6058474) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 6058673..6059776 /gene="gbdR" /locus_tag="PA5380" /db_xref="GeneID:881137" CDS 6058673..6059776 /gene="gbdR" /locus_tag="PA5380" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein GbdR" /protein_id="NP_254067.1" /db_xref="GeneID:881137" /translation="MTTYAPGVPPQNRNPQSIGFLLLDNFTLISLASAVEPLRMANQL SGRELYRWHTLSLDGRQVWASDGLQITPDAGTDNAPAVDCVIVCGGVGIQRSVTREHV TFLQAQARQGRRLGAVCTGSWALARAGLLDGYDCSVHWECLAAMQEAFPRVAMSTRLF SIDRNRFTSSGGTAPMDMMLHLIGREHGRELSAAISEMFIYERIRNEQDHQRVPLKHM LGTNQPKLQEIVALMEANLEEPIDLDELAVYVNVSRRQLERLFQKYLHCSPSRYYLKL RLIRARQLLKQTSMSIIEVASVCGFVSTPHFSKCYREYFGIPPRDERQGQPLGQPVVL MPIPQDLALMPNSSALSALSQAQGESTFASVRI" misc_feature 6058724..6059644 /gene="gbdR" /locus_tag="PA5380" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene complement(6059823..6060200) /locus_tag="PA5381" /db_xref="GeneID:881138" CDS complement(6059823..6060200) /locus_tag="PA5381" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254068.1" /db_xref="GeneID:881138" /translation="MAVSLAVELAENDLPMSRRDSPLAGSDVGSAESMAIPIEGAAAM MHADLIDQDDFRERLQALGFSVPPDSTPEQACEYAVRGLSPERAQALRRLVEDMLGGH ATLLPAVREAISRQLLPALVPRG" gene complement(6060340..6061233) /locus_tag="PA5382" /db_xref="GeneID:881409" CDS complement(6060340..6061233) /locus_tag="PA5382" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_254069.1" /db_xref="GeneID:881409" /translation="MALSFRQLQIFCAVARCGSTTAAAESISLSQSATSAALNELESQ LSTRLFDRVGKRLQLNEVGRRFLPQALRLLDGVAQLEQQFAVSAAPQASLTVAASSTI GNYVLPRLLASFEREQPGVRVNASIGNTGSAVQDVVTFAADIGLIEGPCHEPGLRVEP WLEDSLIVVAAPGHPLASRTQVSREALRRARWLLREPGSGTREEVSHALLGHLHYLED SLDLGSSEAIKHSVAAGLGISCLSRWVVEEQLATGALVELRSSLPPLRRRFYMLRQRD KFLSPGFERFWEHCRAGLGAG" misc_feature complement(6060361..6061233) /locus_tag="PA5382" /note="DNA-binding transcriptional regulator YeiE; Region: trans_reg_YeiE; NF040889" /db_xref="CDD:468825" gene 6061341..6062408 /locus_tag="PA5383" /db_xref="GeneID:881410" CDS 6061341..6062408 /locus_tag="PA5383" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254070.1" /db_xref="GeneID:881410" /translation="MHTLPVKTGTRPLAQVQKLIPGLLLSAALAGVAILLGRSQWLQH NGISALTLAIVLGILVGNTLYPRIAAGSAAGVGFSKQILLRAGIILYGLRLTFQDIAG VGLHGVLLDALMLASTFGLACLLGTRLFGLDRTTTLLIGAGSSICGAAAVMATEPVVR GRAEQVAVAVSTVVVFGTLGIFLYPALFQLDQDWGLLPRDPGTWGVYIGATVHEVAQV VAAGRSIGIEAADTAVIAKMVRVMMLAPFLILLSAWLARDKAHRRQHSGATKITIPWF AVGFVLVAGLNSLVSLPPALVSHVNDLDTFLLAMAMAGLGLGTHLSAIRRAGLKPLLL AALLFAWLVLGGGFLTRLALA" misc_feature 6061401..6062318 /locus_tag="PA5383" /note="Conserved hypothetical protein 698; Region: Cons_hypoth698; pfam03601" /db_xref="CDD:427390" gene complement(6062352..6063347) /locus_tag="PA5384" /db_xref="GeneID:881643" CDS complement(6062352..6063347) /locus_tag="PA5384" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="lipolytic protein" /protein_id="NP_254071.1" /db_xref="GeneID:881643" /translation="MAAKYPLSPAMWRFVEHSRAFASDSPRLDAQRAAYARMCQAFAP PRPAGLRVLDSCLPAAPPVRVRRYRPDRPAPPGGWPALLYLHGGGWMLGGLDSHDFIC ADLAARLGLLVLAVDYRLAPEHPFPAALQDCLRAWQALSLGELDEALDGRRLLVAGDS AGGNLAAALCLALRDGGAPSPAAQILLYPLLSAAPSPSRIDCADAPLLGLGDVQACLD AYLPLAALHRQPLALPLEAADFTGLPPAFVAVAEFDPLRDDGERYGAALRAAGGEAGF YPGSGLVHGCLRGHGIDEVEALHEALRRAVQGFLAEDSGERQAGEESTAEHQPGE" misc_feature complement(6062487..6063104) /locus_tag="PA5384" /note="alpha/beta hydrolase fold; Region: Abhydrolase_3; pfam07859" /db_xref="CDD:400284" gene complement(6063353..6063832) /gene="cdhB" /locus_tag="PA5385" /db_xref="GeneID:881644" /db_xref="PseudoCap:PA5385" CDS complement(6063353..6063832) /gene="cdhB" /locus_tag="PA5385" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="carnitine dehydrogenase" /protein_id="NP_254072.1" /db_xref="GeneID:881644" /db_xref="PseudoCap:PA5385" /translation="MSQVLTTYETPVLPEWVDYNGHLRDAFYLLVFSYATDALMAHIG LDSQNRDASGHSLFTLECHLNFLHEVKEGARVEVRTQLLGHDRKRLHIHHALYLPGSG QALALSEQMLLHVSLDGPRSAPFEGEVLARVEALAEAHRALPVPEGVGRVIGLPPVR" misc_feature complement(6063365..>6063829) /gene="cdhB" /locus_tag="PA5385" /note="carnitine 3-dehydrogenase; Region: PRK07531" /db_xref="CDD:236044" gene complement(6063883..6064848) /gene="cdhA" /locus_tag="PA5386" /db_xref="GeneID:881645" /db_xref="PseudoCap:PA5386" CDS complement(6063883..6064848) /gene="cdhA" /locus_tag="PA5386" /EC_number="1.1.1.157" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="3-hydroxybutyryl-CoA dehydrogenase" /protein_id="NP_254073.1" /db_xref="GeneID:881645" /db_xref="PseudoCap:PA5386" /translation="MSFVTEIKTFAALGSGVIGSGWIARALAHGLDVVAWDPAPGAEA ALRARVANAWPALRKQGLAPGAAQERLRFVASIEECVGDADFIQESAPERLDLKLDLH ARISAAARPDVLIGSSTSGLLPSEFYAEASHPERCLVGHPFNPVYLLPLVEVVGGERT AAEAVRAAMRVYESLGMRPLHVRKEVPGFIADRLLEALWREALHLVNDGVATTGEIDD AIRFGAGLRWSFMGTFLTYTLAGGNAGMRHFMAQFGPALQLPWTYLPAPELTEALIDR VVEGTAEQQGARSIAELERYRDDCLLAVLGAIRETKARHGFAFAE" misc_feature complement(6063886..6064848) /gene="cdhA" /locus_tag="PA5386" /note="L-carnitine dehydrogenase; Region: PRK07066" /db_xref="CDD:168796" gene complement(6064899..6065783) /gene="cdhC" /locus_tag="PA5387" /db_xref="GeneID:880508" /db_xref="PseudoCap:PA5387" CDS complement(6064899..6065783) /gene="cdhC" /locus_tag="PA5387" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="carnitine dehydrogenase" /protein_id="NP_254074.1" /db_xref="GeneID:880508" /db_xref="PseudoCap:PA5387" /translation="MNHEVIVTCAVTGAGDTVGRHPAIPVTPKQIAEAAIEAARAGAT VAHCHVRDPATGKPSRDVALYREVVERIRESDTDVIINLTAGMGGDLEIGKGEQPLEF GAGTDLVGPLERLRHVEELLPEICTLDCGTLNFGDGDYIYVSTPAQLRAGARRITELG VKAELEIFDTGHLWFAKQMLKEGLLEDPLFQICLGIPWGAPADTTTMKAMADNLPPGA TWAGFGIGRTQMPMVAQAMLLGGNVRVGLEDNIWLDKGVPASNGSLVERAIEIIERLG GRALSPAEGRRRMNLKPR" misc_feature complement(6064902..6065780) /gene="cdhC" /locus_tag="PA5387" /note="Uncharacterized conserved protein, DUF849 family [Function unknown]; Region: COG3246" /db_xref="CDD:442477" gene complement(6065856..6066794) /locus_tag="PA5388" /db_xref="GeneID:880509" /db_xref="PseudoCap:PA5388" CDS complement(6065856..6066794) /locus_tag="PA5388" /note="'Product name confidence: class 4:Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences.'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254075.1" /db_xref="GeneID:880509" /db_xref="PseudoCap:PA5388" /translation="MKTTIRQLGCALLILASGAALAAEPEQCRTVRLGTVNWTDVVAS SAVAEALLDGLGYQVKQTSASQQIVLAGLADKQLDLFLGYWQPTMQPVARPYLDKGRI EVIEPPTLADAQSTYAVPSYVAEGGLKTFADIARFKDKLGGRIYAIEPGSGSNRITRK MIDDNRFGLKGFQLVESSEAGMLTAVKRAIKRKQWVVFFGWKPHPMNLQIDMTYLTGS EDVFGPDEGAATVSTMTAAGYQAQCGNVARLLHNLRFSSAQVSQVMAPILDRTQPLDA ARQWLKANPEPLKAWLDGVSTFDGKDGLAALQASLK" misc_feature complement(6065862..6066731) /locus_tag="PA5388" /note="choline ABC transporter, periplasmic binding protein; Region: ABC_choline_bnd; TIGR03414" /db_xref="CDD:188316" misc_feature complement(order(6066192..6066194,6066336..6066341, 6066351..6066353,6066450..6066452,6066540..6066542, 6066675..6066677,6066681..6066683)) /locus_tag="PA5388" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:270358" misc_feature complement(order(6066042..6066044,6066051..6066056, 6066063..6066065)) /locus_tag="PA5388" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:270358" gene 6067005..6068015 /gene="cdhR" /locus_tag="PA5389" /db_xref="GeneID:880749" /db_xref="PseudoCap:PA5389" CDS 6067005..6068015 /gene="cdhR" /locus_tag="PA5389" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="CdhR family transcriptional regulator" /protein_id="NP_254076.1" /db_xref="GeneID:880749" /db_xref="PseudoCap:PA5389" /translation="MSQDFWFLLLPGFSVMGFVSAVEPLRVANRFHADLYRWHVLSAD GGPVLASNGMSVNSDGALEPLKKGDLLFVVAGFEPLRAVTPALVQWLRKLDRNGVTLG GIDTGSVVLAEAGLLDGRRATLHWEAIDAFQESYPQLSVTQELFEIDGPRITSAGGTA SIDLMLDLIAQAHGPQLAVQVSEQFVLGRIRPRQDHQRLQVATRYGVSNRKLVQVIGE MERHTEPPLTTLELAERIQVTRRQLERLFRVHLDDTPSNFYLGLRLDKARQLLRQTDL SVLQVSLACGFESPSYFSRSYRARFAASPSQDRAVLPLKAPAATPPGAPAGHRTPRAE RG" misc_feature 6067023..6067934 /gene="cdhR" /locus_tag="PA5389" /note="Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]; Region: GlxA; COG4977" /db_xref="CDD:444002" gene complement(6067945..6069099) /locus_tag="PA5390" /db_xref="GeneID:880750" CDS complement(6067945..6069099) /locus_tag="PA5390" /EC_number="3.5.1.16" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetylornithine deacetylase" /protein_id="NP_254077.1" /db_xref="GeneID:880750" /translation="MPGSRDILADLVAFDTVSRESNLALIDYVRDYLAGFGVDSELFF DADGRKANLYATIGPSDRGGVCLSGHTDVVPADGQAWSVPPFRLSERDGRLYGRGTAD MKGYLACVLAAVPAFLAAPLRLPVHLAFSYDEEVGCLGVRSLLAALERRPHKPLLCII GEPTELKPVLGHKGKLAMRCEVHGAACHSAYAPQGVNAIEYAARLIGRLGEIGARLAV PERHDRRFDPPYSTVQTGLIQGGRALNIVPAECRFDFEVRALPADDPRQVAEELRDYA ESELLPRMRAVERSTDIRFTPLSAYPGLLTADDSQAAELIGLLSGSTDFSTVAFGTEG GLFHQAGIPAVICGPGSMDQGHKPDEFVSLAQLEACDALLARLAAWLREP" misc_feature complement(6067987..6069099) /locus_tag="PA5390" /note="acetylornithine deacetylase; Provisional; Region: PRK07522" /db_xref="CDD:236039" gene complement(6069156..6069830) /locus_tag="PA5391" /db_xref="GeneID:880751" CDS complement(6069156..6069830) /locus_tag="PA5391" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254078.1" /db_xref="GeneID:880751" /translation="MTFSIVGRCAETGQLGIAISSSSIAVGARCPWLRAGTGAVATQN ITLPALGPQILDRLDQGLAPGEALDQALSSNGYGQYRQVTVIDQHGRTALFTGREALG VHHARAGEQCVAAGNLLAAPEVIEAMVDAFENAEGLLAERLLAAMRAALAAGGEAGPV HSAALSVVGDLLWPVVDLRVDWAEHDPIGQLERLWLAYKPQMQDYVTRALDPTRAPSY GVPGDE" misc_feature complement(6069198..6069827) /locus_tag="PA5391" /note="Uncharacterized conserved protein, Ntn-hydrolase superfamily [General function prediction only]; Region: COG3342" /db_xref="CDD:442571" gene complement(6069844..6070266) /locus_tag="PA5392" /db_xref="GeneID:877651" CDS complement(6069844..6070266) /locus_tag="PA5392" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254079.1" /db_xref="GeneID:877651" /translation="MPTHTRIRMFNTKDTYPNQSLDNDLCQAVRAGNTVYVRGQVGTD FDGNLVGLGDPRAQAEQAMKNVKQLLEEAGSDLSHIVKTTTYLIDPRYREPVYREVGK WLKGVFPISTGLVVSALGQPQWLMEIDVIAVIPDDWQQ" misc_feature complement(6069862..6070191) /locus_tag="PA5392" /note="Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family [Defense mechanisms]; Region: RidA; COG0251" /db_xref="CDD:440021" gene complement(6070266..6071618) /locus_tag="PA5393" /db_xref="GeneID:877652" CDS complement(6070266..6071618) /locus_tag="PA5393" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254080.1" /db_xref="GeneID:877652" /translation="MTDLNRTALPSRTDGTVEKTDTLVVGAGQAGVAMSEHLSRLGVP HLVLERNRIAEAWRSGRWDSLVANGPAWHDRFPGMEFDIDPDGFPGKDQVAAYFEAYA KRFDAPIRTGVEVRKVVRNVGRPGFTVDTSAGTIEANRVVAATGPFQRPVIPPIAPRD ERIRQIHSAHYYNPQQLPEGAVLVVGAGSSGVQIADELQRAGRQVYLSVGAHDRPPRS YRNRDFCWWLGVLGEWDAEVAKPGREHVTIAVSGARGGHTVDFRALAHQGVTLVGLTE SFVDGVATFRPDLAENLARGDENYLALLDAADAYIARNGLDLPEEPEARRRLPDPQCV TDPILELDLAEAGVGSIIWATGYAVDFGWLQVDAFDRDGKPRHQRGVSSEPGVYFIGL PWLSRRGSSFIWGVWHDARHVADHIAIQRKYLAYRDAAQRQEQDRASQAPQTSLQEVS " misc_feature complement(6070308..6071573) /locus_tag="PA5393" /note="Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism]; Region: CzcO; COG2072" /db_xref="CDD:441675" gene complement(6071912..6073384) /gene="cls" /locus_tag="PA5394" /db_xref="GeneID:883132" CDS complement(6071912..6073384) /gene="cls" /locus_tag="PA5394" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cardiolipin synthetase" /protein_id="NP_254081.1" /db_xref="GeneID:883132" /translation="MAATGVDKDRPRAMTSTTYLGLLLVGIQVLGFVAAIHAVLTVRT AQGAIAWATSLVFMPYLTLLPYLVFGRSRFDAYIEARRQANREMHLAAAELDWRPWVE EALAARQVSGYKGLKALVRMTRTPTLANNRVRLLVNGEASFEAMFKAISAARQVILVQ FFIVRDDALGQRLQQLLLERAANGVEVFFLYDAIGSHALPHRYVERLRQGGVQMHGFS TGSGMLNRFQVNFRNHRKVVVVDGECGFVGGHNVGVEYLGEKPPLAPWRDTHMELRGP AVACLQESFAEDWYWATHSLPPLILPPQYDSEGALCQVVASGPADAQETCSLFFVEMI NAAHERVWITSPYFVPDEAVMAALRLAVLRGVDVRLLIPSRPDHRTVYAASSLYALEA IRAGVKVFRYQPGFLHQKVVLVDRDTAAVGSANLDNRSFRLNFEVMVVTVDEGFAGEV EAMLEADFAESLEFTPEDRRSVRRLQQLGMRVARLVSPIL" misc_feature complement(6071915..6073342) /gene="cls" /locus_tag="PA5394" /note="cardiolipin synthetase; Reviewed; Region: cls; PRK01642" /db_xref="CDD:234967" gene 6073538..6074008 /locus_tag="PA5395" /db_xref="GeneID:883133" CDS 6073538..6074008 /locus_tag="PA5395" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254082.1" /db_xref="GeneID:883133" /translation="MSDVRPPLPPFTAETAAQKVRAAEDGWNSRDPQRVSLAYSPDSV WRNRSTFVRGRERIVEFLSGKWQREQEYRLIKELWAFTGNRIAVRFAYEWHDDSGNWF RSYGNENWAFDEQGLMYERHASINDLPIREDQRLFRWLLGRRPDNHPSLGELGL" misc_feature 6073544..6074005 /locus_tag="PA5395" /note="Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily [Function unknown]; Region: COG3558" /db_xref="CDD:442779" gene 6074230..6075207 /locus_tag="PA5396" /db_xref="GeneID:878120" CDS 6074230..6075207 /locus_tag="PA5396" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254083.1" /db_xref="GeneID:878120" /translation="MSPAELHADSIVIDGLIIAKWNRELFEDMRKGGLTAANCTVSVW EGFQATVNNIAASNKLIRDNSDLVIPVRSTADIRKAKEQGKTGILYGFQNAHAFEDQI GYVEVFKQLGVGIVQMCYNTQNLVGTGCYERDGGLSGFGREIVAEMNRVGIMCDLSHV GSKTSEEVILESKKPVCYSHCLPSGLKEHPRNKSDEELKFIADHGGFVGVTMFAPFLK KGIDSTIDDYAEAIEYVMNIVGEDAIGIGTDFTQGHGHDFFEWLTHDKGYARRLTNFG KIVNPLGIRTVGEFPNLTETLLERGMPERVVRKVMGENWVRVLRDVWGE" misc_feature 6074245..6075192 /locus_tag="PA5396" /note="Membrane dipeptidase (Peptidase family M19); Region: Peptidase_M19; pfam01244" /db_xref="CDD:395996" gene 6075334..6075864 /locus_tag="PA5397" /db_xref="GeneID:878121" CDS 6075334..6075864 /locus_tag="PA5397" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254084.1" /db_xref="GeneID:878121" /translation="MAKHAPQLPIEVDSETGVWTTDALPMLYVPRHFFVNNHMGIEEV LGADAYAEILYKAGYKSAWHWCEKEAECHGLEGVAVFEHYMKRLSQRGWGLFEIERIN LEEGTAEVRLRHSAFVYVYGKVNRKVDYMFTGWFAGAMDQILAARGSSLRTVAEQVYS GAEDGHEDGLFVVKPL" misc_feature 6075349..6075630 /locus_tag="PA5397" /note="Domain of unknown function (DUF5943); Region: DUF5943; pfam19367" /db_xref="CDD:437199" misc_feature 6075658..6075858 /locus_tag="PA5397" /note="V4R domain; Region: V4R; cl15268" /db_xref="CDD:449524" gene 6075880..6077940 /gene="dgcA" /locus_tag="PA5398" /db_xref="GeneID:878122" CDS 6075880..6077940 /gene="dgcA" /locus_tag="PA5398" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="dimethylglycine catabolism protein DgcA" /protein_id="NP_254085.1" /db_xref="GeneID:878122" /translation="MAFEAMFQPIQIGKLTIRNRVLSTAHAEVYATDGGMTTERYVKY YEEKAKGGIGLAICGGSSVVAIDSPQQWWSSVNLSTDRIIPHFQNLADAMHKHGAKIM IQITHMGRRSRWDGYHWPTLMSPSGIREPVHRATCKTIEVEEIWRVIGNYAQAARRAK EGGLDGVELSAVHQHMIDQFWSPRVNKRTDEWGGSFEGRMKFGLEVLKAVRAEVGEDF CVGMRICGDEFHPDGLSHEDMKQIAKYYSDTGMLDFIGVVGSGCDTHNTLANVIPNMT FPPEPFLHLAAGIKEVVDVPVLHAQNIKDPNQATRILEGGYVDMVGMTRAHIADPHLI AKIKMGQVDQIKQCVGANYCIDRQYQGLDVLCIQNAATSREYMGVPHIIEKSAGPKRK VVVVGGGPAGMEAARVAAERGHDVTLFEKKEQLGGQITTAAKAPQRDQIAGITRWYQL ELARLGIDLRLGTAADPETILDLRPDVVVLANGGHPFLEQNEHWGAAEGLVVSSWDVL DGTVEPGKNVLVYDTICEFSGMSVADFLADKGAQVEIVTDDIKPGVAIGGTTFPTYYR SMYPKEVIMTGDLMLEKVYREGDKLVAVLENEYTGAREERVVDQVVVENGVRPDESLY YALKQGSRNKGQIDVEALFAIQPQPCLSQPGEGYLLFRIGDCVAQRNTHAAIYDALRL CKDF" misc_feature 6075895..6076935 /gene="dgcA" /locus_tag="PA5398" /note="Old yellow enzyme (OYE)-related FMN binding domain, group 3. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as...; Region: OYE_like_3_FMN; cd04734" /db_xref="CDD:240085" misc_feature order(6075952..6075954,6075958..6075960,6076057..6076059, 6076189..6076191,6076402..6076404,6076546..6076548, 6076849..6076854) /gene="dgcA" /locus_tag="PA5398" /note="putative active site [active]" /db_xref="CDD:240085" misc_feature order(6075952..6075954,6075958..6075960,6076057..6076059, 6076189..6076191,6076546..6076548,6076849..6076854) /gene="dgcA" /locus_tag="PA5398" /note="putative FMN binding site [chemical binding]; other site" /db_xref="CDD:240085" misc_feature order(6076396..6076398,6076402..6076404) /gene="dgcA" /locus_tag="PA5398" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:240085" misc_feature 6076402..6076404 /gene="dgcA" /locus_tag="PA5398" /note="putative catalytic residue [active]" /db_xref="CDD:240085" misc_feature 6077074..6077916 /gene="dgcA" /locus_tag="PA5398" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox_2; cl39093" /db_xref="CDD:476868" gene 6078044..6080005 /gene="dgcB" /locus_tag="PA5399" /db_xref="GeneID:882141" CDS 6078044..6080005 /gene="dgcB" /locus_tag="PA5399" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="dimethylglycine catabolism protein DgcB" /protein_id="NP_254086.1" /db_xref="GeneID:882141" /translation="MLDTLLPVLLFAALALAVLGAAKRFLMWRRGRPAKVDWIGGLLQ MPRRYLVDLHHVVERDRYMSRTHVATAGGFVLAALLAILVHGFGLHGRILGFALLAAT ALMFVGALFVARRRLDPPSRLSKGPWMRLPKSLLAFAASFFLATLPVAGILPEGFGGW FLAGLLAIGVAWGVSELFLGMTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKALD LADPQAPLGVEKPSDFTWNQLLGFDACVQCGKCEAMCPAFAAGQPLNPKKLIQDMVIG LAGGNDAKFAGSPYPGKPLGEHGGGPHQPIVALDGKALVDADTLWSCTTCRACVEECP MMIEHVDAIVDMRRHLTLEKGATPNKGAEVLDNLIATDNPGGFAPGGRLNWAADLNLP LMSEKKSADVLFWVGDGAFDMRNQRTLRAFVKILKAAAVDFAVLGLEERDSGDVARRL GDEATFQNLARRNIATLAKYRFTRIVSCDPHSFHVLKNEYGALGGDYQVLHHSTFIDE LLRAGTLQPGRSKAGSVTYHDPCYLGRYNGEYEAPRNVLRALGIEVKEMQRSGFRSRC CGGGGGAPITDIPGKQRIPDMRMADIRETGAELVAVGCPQCTAMLEGVVAPRPEIKDI AELVAEALIEQAEAPAKKPLRREAVAEVH" misc_feature 6078110..6078709 /gene="dgcB" /locus_tag="PA5399" /note="Domain of unknown function (DUF3483); Region: DUF3483; pfam11982" /db_xref="CDD:432237" misc_feature 6078560..6079939 /gene="dgcB" /locus_tag="PA5399" /note="Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF [Energy production and conversion]; Region: GlpC; COG0247" /db_xref="CDD:440017" gene 6080124..6081356 /locus_tag="PA5400" /db_xref="GeneID:882142" CDS 6080124..6081356 /locus_tag="PA5400" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="electron transfer flavoprotein subunit alpha" /protein_id="NP_254087.2" /db_xref="GeneID:882142" /translation="MNDIVRRDPRAEWIARNRLHPLHAAMQSAQGGEVRWMGPHGVIR KNPHAVGFLGPNGIRRIDRSGGQQGSGARRASVAQEAQLPLHVVEQPAFLVAVVPDMV GGRLSSHDKDLLGLARKLAGNDGAVLAVVFGEHKESAFDSAGVDRLLHLSGGEYDGYA PEQRILALRNLENQLAPRHWLFPDSRNGGGELGRRLAAALGERPAGRVWQVEDGRCIG RAGAGREDIQRALPRLLLAAAECAEPVSETRHEVRELHMAEQVARNLPRIEDLGPVAV DPARIPMAEAEFILSGGNGVQDWTLFHQAAAVLGATEGASRVAVDDGHMPRNRQVGAT GTWVTARVYLAVGISGAIQHLQGIGACDKVVAVNRDAGCDMIKRADLSVIGDSTEILR ALIRLAEAHRNGAARDAA" misc_feature 6080406..6081329 /locus_tag="PA5400" /note="Electron transfer flavoprotein, alpha subunit FixB [Energy production and conversion]; Region: FixB; COG2025" /db_xref="CDD:441628" gene 6081392..6082165 /locus_tag="PA5401" /db_xref="GeneID:880380" CDS 6081392..6082165 /locus_tag="PA5401" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254088.1" /db_xref="GeneID:880380" /translation="MTELNIVALVSIGAHPASGRPRRAEQDARAVELGLCLSGPRLQV LHAGDPHAEALRGYLGMGLERLSVLEQPAGADALPALAEHLRDSRAQLVLTGSQAETG EGSGMLPFLLAERLGWPLVVGLAEVEKVEDGSAQVLQALPRGQRRRLRVRLPFVASVD NAAPVARQSAFGPARRGEIEAHEVEVVDDPLLAEDSLQPARPRPKRLKVIKAKTGAER MKAATAKASGGTGQVLKDLSAEAGAEAIFKLLREEGVIR" misc_feature 6081470..6082159 /locus_tag="PA5401" /note="Electron transfer flavoprotein, alpha and beta subunits [Energy production and conversion]; Region: FixA; COG2086" /db_xref="CDD:441689" misc_feature 6081470..>6081802 /locus_tag="PA5401" /note="Adenine nucleotide alpha hydrolase (AANH) superfamily; Region: AANH_superfamily; cl00292" /db_xref="CDD:469708" gene 6082290..6082859 /locus_tag="PA5402" /db_xref="GeneID:880381" CDS 6082290..6082859 /locus_tag="PA5402" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254089.1" /db_xref="GeneID:880381" /translation="MALSTHLSNHKLYLLGMLCAILAWGMACIELGANTHLWFSGLSE QGYLQAWSDEMPRLASDGFVLSWSSRALLMLLDYLPTLLSAFGLALTGLFFRRLAKGE RWSQRNARTLVHIGLLSFLALLLQPFINTLQGLVLSLDLPDGERVLSVSIGLTSEAAY EFLKAIFLCSFGLMMSEARKLDEEVRAFI" gene 6082867..6083073 /locus_tag="PA5403" /db_xref="GeneID:880382" CDS 6082867..6083073 /locus_tag="PA5403" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_254090.1" /db_xref="GeneID:880382" /translation="MIIIRLDVILAKNKVRSKELAEAIGITEQNLSLLKNGKVKGIRL DTLEKICAFLDCQPGDILEYVADD" misc_feature 6082867..6083070 /locus_tag="PA5403" /note="DNA-binding transcriptional regulator, XRE family [Transcription]; Region: YozG; COG3655" /db_xref="CDD:442872" gene 6083105..6083509 /locus_tag="PA5404" /db_xref="GeneID:880103" CDS 6083105..6083509 /locus_tag="PA5404" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254091.1" /db_xref="GeneID:880103" /translation="MNRHLNLSGVALALALISGCGPSVRYQYVMPPSEAGRTCVAQCR TQQSQCESLARLEWQNENRLREAERRSYHYCSQGKSKKQARKECLAPGYSSSFGYNGF GGSGNFNCSSDYDRCFTDICGGTIRRIVEQPQ" gene 6083523..6083756 /locus_tag="PA5405" /db_xref="GeneID:880104" CDS 6083523..6083756 /locus_tag="PA5405" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254092.1" /db_xref="GeneID:880104" /translation="MSRRLFPLLPFLFLVGCAQGYPSFSGILPDVRVSGDERSYAERA EDCLKRRNCPPATDRDPFVADPGHYSLGGSFHW" gene 6083753..6084085 /locus_tag="PA5406" /db_xref="GeneID:880092" CDS 6083753..6084085 /locus_tag="PA5406" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254093.1" /db_xref="GeneID:880092" /translation="MKPGAEAWQPTTDLASAGAFLYPARPLNDWDEIMLENTLERLET LVAELLQQNQALRDSHDQLQQQLRQATEENETLQLSMLEQEEKQSGTQARLEALVERL SAQQPVSA" misc_feature 6083801..>6084073 /locus_tag="PA5406" /note="type I restriction enzyme EcoKI subunit R; Provisional; Region: hsdR; PRK11448" /db_xref="CDD:236912" gene 6084082..6084372 /locus_tag="PA5407" /db_xref="GeneID:880093" CDS 6084082..6084372 /locus_tag="PA5407" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254094.1" /db_xref="GeneID:880093" /translation="MSRDGVQVLSILGRDYSIRVPAGEERALADAAALLQAEVDANKR KFPYVTSNELVVLSALNLCARQLGANDGESPRLRAVEQRLEALVERIAGASG" misc_feature 6084082..6084363 /locus_tag="PA5407" /note="Cell division protein ZapA, inhibits GTPase activity of FtsZ [Cell cycle control, cell division, chromosome partitioning]; Region: ZapA; COG3027" /db_xref="CDD:442263" gene complement(6084369..6084545) /locus_tag="PA5408" /db_xref="GeneID:880094" CDS complement(6084369..6084545) /locus_tag="PA5408" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254095.1" /db_xref="GeneID:880094" /translation="MAAKPAEETRWCLWRQDDNGNAFVMRRDLTRDEACALVKDYQAR GHRQLYWASPQARD" gene complement(6084550..6085110) /locus_tag="PA5409" /db_xref="GeneID:880239" CDS complement(6084550..6085110) /locus_tag="PA5409" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254096.1" /db_xref="GeneID:880239" /translation="MENNPLWAELGKHWKLVALRGVAALVFGVLTLLSPALALTVLVL FWGAYALVDGAFALIAAFNMRSDGQFNWPLALVGVIGVAAGLVAFFWPQLTAIGLLLI IAGWALAMGIFQIVAAIRLRKSIQNEWWMILSGAISVLFGVLMIANPGAGALAVVWVI GAYAVFFGVLLVMLALRLRKTSTLKA" misc_feature complement(6084565..6085083) /locus_tag="PA5409" /note="Acid resistance membrane protein HdeD, DUF308 family [General function prediction only]; Region: HdeD; COG3247" /db_xref="CDD:442478" gene complement(6085385..6086674) /gene="gbcA" /locus_tag="PA5410" /db_xref="GeneID:880240" CDS complement(6085385..6086674) /gene="gbcA" /locus_tag="PA5410" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein GbcA" /protein_id="NP_254097.1" /db_xref="GeneID:880240" /translation="MDVTSTLSLGDPLEPARKATADMLRSRDHSFSLPQPFYCDQRLF EIDMQEIFHKEWLIAGMTCEIPAKGNFLTLQIGKNPVLVIRGAEGQVHAFHNVCRHRG SRLCVSEKGKVAKLVCPYHQWTYELDGRLLFAGTEMGADFDMKEYGLKPIQVKTAGGY IFISLAENPPAIDDFLATLEHYMEPYDMENAKVAVQTTIREAANWKLVIENNRECYHC NGSHPELLKTLLEWDDVTDPRASQAFKDQVAACTSAWDAEKIPYAHASFGLRNRIVRM PLLDGTVSMTMDGKQGSKKLMGRIKNPDLGSMRILHLPHSWNHCMGDHLIVFTVWPIS AQETLVTTKWLVHKDAVEGVDYDVARLREVWDATNDQDRRLAEENQRGINSDAYQPGP YSKTYEFGVINFLDWYSERMLNNLGEESAHVRKVAGS" misc_feature complement(6085442..6086584) /gene="gbcA" /locus_tag="PA5410" /note="Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit [Inorganic ion transport and metabolism, General function prediction only]; Region: HcaE; COG4638" /db_xref="CDD:443676" misc_feature complement(6085439..6086122) /gene="gbcA" /locus_tag="PA5410" /note="C-terminal catalytic domain of GbcA (glycine betaine catabolism A) from Pseudomonas aeruginosa PAO1 and related aromatic ring hydroxylating dioxygenases; Region: RHO_alpha_C_GbcA-like; cd08884" /db_xref="CDD:176893" misc_feature complement(order(6085451..6085453,6085463..6085465, 6085472..6085474,6085484..6085486,6085490..6085498, 6085529..6085543,6085547..6085555,6085664..6085669, 6086012..6086014,6086024..6086029,6086033..6086035, 6086042..6086047,6086054..6086056,6086066..6086071)) /gene="gbcA" /locus_tag="PA5410" /note="putative alpha subunit interface [polypeptide binding]; other site" /db_xref="CDD:176893" misc_feature complement(order(6085559..6085561,6085568..6085573, 6085589..6085594,6085601..6085603,6085691..6085693, 6085697..6085699,6085718..6085720,6085724..6085726, 6085748..6085750,6085754..6085759,6086009..6086011, 6086021..6086026,6086030..6086035,6086039..6086044)) /gene="gbcA" /locus_tag="PA5410" /note="putative active site [active]" /db_xref="CDD:176893" misc_feature complement(order(6085568..6085573,6085589..6085594, 6085601..6085603,6085691..6085693,6085697..6085699, 6085718..6085720,6085724..6085726,6085748..6085750, 6085754..6085759,6086009..6086011,6086021..6086026, 6086030..6086035,6086039..6086044)) /gene="gbcA" /locus_tag="PA5410" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:176893" misc_feature complement(order(6085559..6085561,6086009..6086011, 6086024..6086026)) /gene="gbcA" /locus_tag="PA5410" /note="Fe binding site [ion binding]; other site" /db_xref="CDD:176893" gene 6087099..6088199 /gene="gbcB" /locus_tag="PA5411" /db_xref="GeneID:880070" CDS 6087099..6088199 /gene="gbcB" /locus_tag="PA5411" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="protein GbcB" /protein_id="NP_254098.1" /db_xref="GeneID:880070" /translation="MSSNFLNPVTTQTWANGRHLVRCVKVIQETWDVRTFCFMADQPI LFFFKPGQFVTLELEIDGEPVMRSYTISSSPSVPYSFSITIKRVPGGRVSNWLHDNLK EGQELPVHGPVGLFNAIDFPADKVLFLSGGVGITPVMSMARWFFDTNANVDMVFVHSA RSPKDIIYHRELEHMASRIDNFSLHIICERHGLGEAWAGYRGYLNLRMLELIAPDFLE REIFCCGPTPYMSAVKHLLQGHGYDMSRYHEEAFGPTPPEVRADVRELAAEAAEAPEV PVADQHQVEFTATGKSIRVSPGETVHAAAAKLGLHIPKACGMGICGTCKVMKTAGEVE MEHNGGITDEDVAEGYILSCCSVPKGDVVIDY" misc_feature 6087159..6087854 /gene="gbcB" /locus_tag="PA5411" /note="Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron...; Region: FNR_iron_sulfur_binding_1; cd06215" /db_xref="CDD:99811" misc_feature order(6087255..6087257,6087297..6087308,6087348..6087356, 6087360..6087362,6087372..6087380,6087495..6087497, 6087504..6087506,6087846..6087848,6087852..6087854) /gene="gbcB" /locus_tag="PA5411" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99811" misc_feature order(6087297..6087299,6087303..6087308) /gene="gbcB" /locus_tag="PA5411" /note="FAD binding motif [chemical binding]; other site" /db_xref="CDD:99811" misc_feature order(6087369..6087371,6087378..6087380,6087387..6087389, 6087408..6087410,6087432..6087434,6087438..6087440) /gene="gbcB" /locus_tag="PA5411" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99811" misc_feature order(6087480..6087482,6087492..6087503,6087507..6087509) /gene="gbcB" /locus_tag="PA5411" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99811" misc_feature order(6087495..6087500,6087573..6087581,6087771..6087776) /gene="gbcB" /locus_tag="PA5411" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99811" misc_feature 6087945..6088196 /gene="gbcB" /locus_tag="PA5411" /note="Ferredoxin [Energy production and conversion]; Region: Fdx; COG0633" /db_xref="CDD:440398" gene complement(6088193..6090706) /locus_tag="PA5412" /db_xref="GeneID:880071" CDS complement(6088193..6090706) /locus_tag="PA5412" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254099.1" /db_xref="GeneID:880071" /translation="MALVVGRSLDYPWLLPGKWDGSWIMDDRMSDKPLGRLLLEGLGE IAWIAVLVALGVLLPLPLVALGWALLLGAEWAMDRWRGKVPYRLQQALFFWVLGGGIA LGQALPGFWLGLGGGLLAVIGGVLLQIRFERGLRLERQAPQALDVPLPAGGSAWGGEA PERTPEGEPIRLFDGGEIAMGGPLVCHYLMPDGCFIPDCNPSARFSSDGRHFVSPIPS RGAWGLAIFDRQERLLYRCAVDNFWELDSVTEREVIGRHSPLTSNAPQRLELQALKAG SEAEAFVAIGDLWLPESEWQRWSGDLRAQPLPSPLGGPALEIRPWLPDSLLALDDPFA PLRANRGELWINGEASGLYLSREAPPLAWNDDGRALALQAAGEPLGQDTYWLWREDGG LRALGAPWSALPAEPHAGGPELLGLEDGWLRFGLDLAQPCLTYERYGTLGSYSHSSLY LLHARDADDRPRWREADMPRLDLLLPLDGAAGRPGCLLQSAPLADGSRAVWEWLRDDQ EAERGAYALRLGDWRLDGEWTLDHRVSDCGRYLAVVAFAEAPTLPQRLAILDSRERRL EWLAEPLADLHLQGFIDGQVHLLHLLGRNAYQPPGGPGEGDPGLLRRFDEGLPEPGAW HAFGRFHDDWRHYYEQARVAFDGTAWRLCPASRWLDAPPRPWSDGDFVLPSVGAKDAA WGFGFHYEGMHRDEDVRAGFSRDGYLLTASGIGLGNLAAPMIWSADGRYLALTRHVQR YEESELERDQWRLLLLDVQERTLRRYRDDLGEYPCFDSFDDDLCFRCAGTGRYVLALD SLLKAPAEPLQACAGRWLPAEELPRRRYWERLAFPSRPQ" misc_feature complement(6088424..>6089839) /locus_tag="PA5412" /note="Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]; Region: PksD; COG3321" /db_xref="CDD:442550" gene complement(6092046..6093086) /gene="ltaA" /locus_tag="PA5413" /db_xref="GeneID:880064" CDS complement(6092046..6093086) /gene="ltaA" /locus_tag="PA5413" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="low specificity l-threonine aldolase" /protein_id="NP_254100.1" /db_xref="GeneID:880064" /translation="MTDHTQQFASDNYSGICPEAWAAMAEANRGHERAYGDDQWTARA SDYFRQLFETDCEVFFAFNGTAANSLALAALCQSYHSVICSETAHVETDECGAPEFFS NGSKLLLAQTEVGKLTPASIRDIALKRQDIHYPKPRVVTLTQATEVGTVYRPDELKAI SATCKELGLHLHMDGARFSNACAFLGCSPAELSWKAGVDVLCFGGTKNGMAVGEAILF FNRDLAEDFDYRCKQAGQLASKMRFLAAPWVGVLQDDAWLRYADHANRCARLLAELVA DVPGVSLMFPVEANGVFLQLSEPAIEALRARGWRFYTFIGEGGARFMCSWDTDIERVR ELARDIRLVMGA" misc_feature complement(6092058..6093068) /gene="ltaA" /locus_tag="PA5413" /note="Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a...; Region: TA_like; cd06502" /db_xref="CDD:99748" misc_feature complement(order(6092151..6092153,6092355..6092360, 6092388..6092393,6092400..6092405,6092448..6092450, 6092466..6092471,6092763..6092771,6092793..6092816, 6092868..6092870,6092889..6092894,6092901..6092903, 6093009..6093017,6093024..6093026,6093042..6093053, 6093060..6093062)) /gene="ltaA" /locus_tag="PA5413" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:99748" misc_feature complement(order(6092466..6092468,6092475..6092477, 6092556..6092558,6092565..6092567,6092658..6092660, 6092883..6092885,6092892..6092897)) /gene="ltaA" /locus_tag="PA5413" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99748" misc_feature complement(6092466..6092468) /gene="ltaA" /locus_tag="PA5413" /note="catalytic residue [active]" /db_xref="CDD:99748" gene complement(6093167..6093808) /locus_tag="PA5414" /db_xref="GeneID:880065" CDS complement(6093167..6093808) /locus_tag="PA5414" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254101.1" /db_xref="GeneID:880065" /translation="MKRPLIFLSAVLLGASLQGCGGGDEKQAAAPALPADSCTGHELE VALPPAGKPLFGYDFLSRQCGYNDATVVFGAADGSKRLEIVLTDTGLPAPPTEGDAVA YRAAQDKLREMTQTNLTLLHKTRETALKNGTAERFGGEDYLPLIDTTRMGDPLGVMVP AKGEEGVSTLSGVIKNRYVLTLSTRDTPNGGSATAMRQVLVPFVEQMKLTKLP" gene 6094024..6095277 /gene="glyA1" /locus_tag="PA5415" /db_xref="GeneID:880066" CDS 6094024..6095277 /gene="glyA1" /locus_tag="PA5415" /EC_number="2.1.2.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="serine hydroxymethyltransferase" /protein_id="NP_254102.1" /db_xref="GeneID:880066" /translation="MFSKHDQIRGYDDELLAAMDAEEARQEDHLELIASENYTSKRVM QAQGSGLTNKYAEGYPGKRYYGGCEHVDKVERLAIDRARQLFGADYANVQPHSGSSAN AAVYLALLNAGDTILGMSLAHGGHLTHGAKVSSSGKLYNAVQYGLDTATGLIDYDEVE RLAVEHKPKMIVAGFSAYSKTLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPI PFADVVTTTTHKTLRGPRGGLILARANEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCF KEALEPGFKDYQAQVIRNAKAMAEVFIGRGYDVVSGGTDNHLMLISLVRQGLTGKEAD AALGRVGITVNKNAVPNDPQSPFVTSGIRIGTPAITTRGLQEAQSRELAGWICDILDH LGDADVEAKVATQVAGLCADFPVYR" misc_feature 6094024..6095271 /gene="glyA1" /locus_tag="PA5415" /note="serine hydroxymethyltransferase; Reviewed; Region: PRK13034" /db_xref="CDD:237280" misc_feature order(6094057..6094059,6094063..6094065,6094084..6094089, 6094114..6094116,6094129..6094131,6094183..6094185, 6094237..6094242,6094264..6094266,6094309..6094311, 6094330..6094332,6094435..6094440,6094816..6094818, 6094870..6094872) /gene="glyA1" /locus_tag="PA5415" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:99733" misc_feature order(6094126..6094128,6094186..6094188,6094216..6094218, 6094315..6094320,6094399..6094401,6094549..6094551, 6094624..6094626,6094633..6094635,6094708..6094713, 6094729..6094731,6095110..6095112) /gene="glyA1" /locus_tag="PA5415" /note="glycine-pyridoxal phosphate binding site [chemical binding]; other site" /db_xref="CDD:99733" misc_feature order(6094126..6094128,6094399..6094401,6094711..6094713, 6095110..6095112) /gene="glyA1" /locus_tag="PA5415" /note="active site" /db_xref="CDD:99733" misc_feature order(6094192..6094194,6094213..6094215,6094384..6094386, 6094396..6094398,6094402..6094404,6094792..6094794, 6095062..6095064) /gene="glyA1" /locus_tag="PA5415" /note="folate binding site [chemical binding]; other site" /db_xref="CDD:99733" gene 6095363..6096613 /gene="soxB" /locus_tag="PA5416" /db_xref="GeneID:880060" CDS 6095363..6096613 /gene="soxB" /locus_tag="PA5416" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="sarcosine oxidase subunit beta" /protein_id="NP_254103.1" /db_xref="GeneID:880060" /translation="MQRYSGFGLLKHSLSHHENWQRMWRTPTPKPVYDVVIVGGGGHG LATAYYLAKEHGISNVAVVEKGWLGGGNTARNTTIVRSNYLWDESALLYEHAMKLWEG LSQDLNYNVMFSQRGVYNLCHTLQDMRDGERRVSANRLNGVDGELLNAQQVAEEIPYL DCSKSTRYPIMGATIQRRGGVARHDAVAWGFARAADALGVDLIQQTEVTGFRKQDGAV IGVETNRGFIGARRVGVVTAGNSGHMARLAGFRLPLESHPLQALVSEPLKPIIDSVIM SNAVHGYISQSDKGDLVIGAGIDGYNGYGQRGSYPVIEHTLQAIVEMFPVLSRVRMNR QWGGIVDTTPDACPIIGKTPVQNLFFNCGWGTGGFKATPGSGNVFAATLAKGEPHPLA APFSIERFHSGALIDEHGAAAVAH" misc_feature 6095369..6096586 /gene="soxB" /locus_tag="PA5416" /note="sarcosine oxidase, beta subunit family, heterotetrameric form; Region: soxB; TIGR01373" /db_xref="CDD:273585" gene 6096707..6097027 /gene="soxD" /locus_tag="PA5417" /db_xref="GeneID:880061" CDS 6096707..6097027 /gene="soxD" /locus_tag="PA5417" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="sarcosine oxidase subunit delta" /protein_id="NP_254104.1" /db_xref="GeneID:880061" /translation="MLNIFCPHCGELRSEEEFHAKGQAHIPRPLDPNACSDEEWGDYM FFRDNPRGLHHELWVHAAGCRKYFNVTRHTVTYEILETYLIGEQPSVVADGEKKPAVQ GEPA" misc_feature 6096713..6096967 /gene="soxD" /locus_tag="PA5417" /note="sarcosine oxidase, delta subunit family, heterotetrameric form; Region: soxD; TIGR01374" /db_xref="CDD:130441" gene 6097024..6100041 /gene="soxA" /locus_tag="PA5418" /db_xref="GeneID:880824" CDS 6097024..6100041 /gene="soxA" /locus_tag="PA5418" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="sarcosine oxidase subunit alpha" /protein_id="NP_254105.1" /db_xref="GeneID:880824" /translation="MSQINRLSSGGRIDRNRPLTFSFNGQHYQGYAGDTLAAALLANG VDIVGRSFKYSRARGIVAAGAEEPNAILQIGSREATQIPNVRATQQALYGGLVATSTN GWPNVQNDLMGIFGKVGGKLMPPGFYYKTFMYPQSMWMTYEKYIRKAAGLGRAPTEVD PDSYDWMNHHCDVLVVGAGPAGLAAALAAARSGARVILADEQEEFGGSLLDTRETLDG KPAAEWVADAVAELQGLPEVILLPRSTVNGYHDHNFLTIHERRTDHLGEVAPLGQVRQ RVHRVRAKRVVLAAGAHERPLVYGNNDLPGNMLAGAVSTYVRRYGVAPGKKLVLATNN DYAYRVALDWQEAGLQVVAIADARANPRGEWVEEARQRGMRVITGSSVIEARGGKRVS GAKVARIDLQAMRASGGEWLDCDLIASSGGYSPVVHLASHLGGKPEWREEILAFVPGE GLQKRICAGAVNGVFGLAEVLADGYQAGSRAALDAGYKTAAGSLPKVQPRREEASVAL FQVPHEKPTARAPKQFVDPQNDVTAAAIELACREGFESIEHVKRYTALGFGTDQGKLG NINGLAIAARAQGKSIADTGTTMFRPNYTPVTFGAVAGRHCGHLFEPVRFTALHAWHV KNGAEFEDVGQWKRPWYFPRRGEDMHAAVARECRAVREAVGLLDASTLGKIDIQGPDA REFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTACLADNHFVMTTTTGGAARV LEWLELYHQTEWPELKVYFTSVTDHYATLTLSGPNSRKLLAEVTDIDLDKDAFPFMTW KEGKVAGVPARVFRISFTGELSYEVNVQADYAMGVLEALAEHGAKYGLTPYGTETMHV LRAEKGFIIVGQDTDASVTPDDLNMGWAVGRSKPFSWIGWRGMNRADCLREDRKQLVG LRPSNPQEVLPEGAQLVFDTQQAIPMKMVGHVTSSYMSASLGHGFALAVVKGGLKRMG QKVYAPLADGRFIEAEICSSVFYDPKGERQNVD" misc_feature 6097042..6100035 /gene="soxA" /locus_tag="PA5418" /note="sarcosine oxidase, alpha subunit family, heterotetrameric form; Region: soxA; TIGR01372" /db_xref="CDD:273584" gene 6100135..6100770 /gene="soxG" /locus_tag="PA5419" /db_xref="GeneID:880825" CDS 6100135..6100770 /gene="soxG" /locus_tag="PA5419" /note="class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="sarcosine oxidase subunit gamma" /protein_id="NP_254106.1" /db_xref="GeneID:880825" /translation="MSKANVYQQRPEPGVHAESPLHHAELHKLAGKTAAKAGIVLREK KLLGHLVLRGDAADPAFAAAVHQALGLELPVALTLVASGETSLQWLAPDEWLLIVPGG EEYAVEQRLRQALGEELHYAVVNVSGGQTLLELSGANVRELLMKSTSYDVHPSNFPVG KAVGSIFAKSQCVIRHTGEDTWELVVRRSFADYFWLWLQDASAEYGLQVAA" misc_feature 6100291..6100746 /gene="soxG" /locus_tag="PA5419" /note="Sarcosine oxidase, gamma subunit family; Region: SoxG; pfam04268" /db_xref="CDD:461245" gene 6100820..6101677 /gene="purU2" /locus_tag="PA5420" /db_xref="GeneID:880052" CDS 6100820..6101677 /gene="purU2" /locus_tag="PA5420" /EC_number="3.5.1.10" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="formyltetrahydrofolate deformylase" /protein_id="NP_254107.1" /db_xref="GeneID:880052" /translation="MSRTPDTWILTADSPSLLGTVDVVTRYLFEQRCYVTEHHSFDDR LAQRFFIRVEFRAGDGFDEASFRAGLAERVAPFGMRTELTAPGYRSQVAIMVSKADHC LNDLLYRQRIGQLPMDVVAVISNHPDLEPLARWHGIPYHHFPLDPNDKPAQEARVWQV LEESGAELVILARYMQVLSPELCRRLDGWAINIHHSLLPGFKGAKPYHQAYQKGVKLV GATAHYINNDLDEGPIIAQGVETVDHAHYPEDLIAKGRDIECLTLARAVGYHIERRVF LNANRTVVL" misc_feature 6100820..6101674 /gene="purU2" /locus_tag="PA5420" /note="formyltetrahydrofolate deformylase; Reviewed; Region: PRK13011" /db_xref="CDD:237266" gene 6101884..6103083 /gene="fdhA" /locus_tag="PA5421" /db_xref="GeneID:880053" CDS 6101884..6103083 /gene="fdhA" /locus_tag="PA5421" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutathione-independent formaldehyde dehydrogenase" /protein_id="NP_254108.1" /db_xref="GeneID:880053" /translation="MSGNRGVVYLGPGKVEVQNIPYPKMQDPQGRQIDHGVILRVVST NICGSDQHMVRGRTTAPEGLVLGHEITGEVVEIGRGVETMKIGDLVSVPFNVACGHCR TCKEQHTGVCLTVNPARAGGAYGYVDMGGWVGGQAEYVLVPYADFNLLKLPNREAAME KIRDLTCLSDILPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASARLLGAAVVIVGD VNPTRLAHAKKQGFEIADLSKDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHSGSQ QEAPATVLNSLMGITRVAGKIGIPGLYVTEDPGAVDAAAKHGALSIRFGLGWAKSHSF HTGQTPVMKYNRQLMQAIMWDRIKIADIVGVEVITLDDAPKGYGEFDAGVPKKFVIDP HNLFRAA" misc_feature 6101887..6103068 /gene="fdhA" /locus_tag="PA5421" /note="formaldehyde dehydrogenase, glutathione-independent; Region: fdhA_non_GSH; TIGR02819" /db_xref="CDD:274314" gene 6103167..6104123 /locus_tag="PA5422" /db_xref="GeneID:880042" CDS 6103167..6104123 /locus_tag="PA5422" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254109.1" /db_xref="GeneID:880042" /translation="MILLPSIRLPETAMNTDSPINRVEQVQVDDLACWRIHTAHGEAL IAQQGAQLLSYQPHEQPPLVWLSDEAGYRRGQSVRGGVPVCWPWFGPLERNPQEVRGQ VEDGLKAPAHGLVRAVDWKIDDIAEEDGDLCVSFRLDAPDGLPGWPHPAALRMLFRFG ERLTLRLTSENLGSKPLVLSQALHTYFAVSDSREIAIEGLEGARYIETLENWEERTQH GAVRVKGELDRIYLGLERDLLIKDPRWERSIHLHALDSRSAVVWNPWVDKSRRLSQFA DDAWQQMLCIETGRVWDDLMVVAPGRSESFGVQIWSEPLKRP" misc_feature 6103227..6104108 /locus_tag="PA5422" /note="D-hexose-6-phosphate mutarotase [Carbohydrate transport and metabolism]; Region: YeaD; COG0676" /db_xref="CDD:440440" gene complement(6104189..6104737) /locus_tag="PA5423" /db_xref="GeneID:880043" CDS complement(6104189..6104737) /locus_tag="PA5423" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254110.1" /db_xref="GeneID:880043" /translation="MRRFPFARLLLLALLSSPLVHAELPETDWLELMPPADRKALEEM PDIVHDTPEAAGTFTSKGGLKQSDRKMPAVMYSAKTVASLDGKAIRLGGYPVPLENDA KGRVTEFFLVPYPGACIHVPPPPPNQIVLVRYPQGLKLTDIYTPLWVSGTLKIEQVSN DLADAAYAIDKARVKVVEEADL" misc_feature complement(6104201..6104680) /locus_tag="PA5423" /note="Uncharacterized conserved protein, DUF3299 family [Function unknown]; Region: COG3495" /db_xref="CDD:442718" gene complement(6104799..6105044) /locus_tag="PA5424" /db_xref="GeneID:878439" CDS complement(6104799..6105044) /locus_tag="PA5424" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254111.1" /db_xref="GeneID:878439" /translation="MGLIGTIIVGLIVGLVARFLKPGDDSMGWIMTILLGIGGSLLAT YGGQAIGFYQAGQAAGFIGAVVGAVVLLVIYGLIKKN" misc_feature complement(6104805..6105044) /locus_tag="PA5424" /note="Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family [General function prediction only]; Region: YeaQ; COG2261" /db_xref="CDD:441862" gene complement(6105159..6106241) /gene="purK" /locus_tag="PA5425" /db_xref="GeneID:878440" CDS complement(6105159..6106241) /gene="purK" /locus_tag="PA5425" /EC_number="4.1.1.21" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="5-(carboxyamino)imidazole ribonucleotide synthase" /protein_id="NP_254112.1" /db_xref="GeneID:878440" /translation="MKIGVIGGGQLGRMLALAGTPLGMNFAFLDPAPDACAASLGEHI RADYGDQEHLRQLADEVDLVTFEFESVPAETVAFLSQFVPVYPNAESLRIARDRWFEK SMFKDLGIPTPDFADVQSQADLDAAAAAIGLPAVLKTRTLGYDGKGQKVLRQPADVQG AFAELGSVPCILEGFVPFTGEVSLVAVRARDGETRFYPLVHNTHDSGILKLSVASSGH PLQALAEDYVGRVLARLDYVGVLAFEFFEVDGGLKANEIAPRVHNSGHWTIEGAECSQ FENHLRAVAGLPLGSTAKVGESAMLNFIGAVPPVAQVVAVADCHLHHYGKAFKNGRKV GHATLRCADRATLQARIAEVEALIEA" misc_feature complement(6105162..6106241) /gene="purK" /locus_tag="PA5425" /note="phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed; Region: PRK06019" /db_xref="CDD:235674" gene complement(6106272..6106763) /gene="purE" /locus_tag="PA5426" /db_xref="GeneID:877624" CDS complement(6106272..6106763) /gene="purE" /locus_tag="PA5426" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="5-(carboxyamino)imidazole ribonucleotide mutase" /protein_id="NP_254113.1" /db_xref="GeneID:877624" /translation="MSALVGVIMGSKSDWSTLSHTADMLDKLGIPYEVKVVSAHRTPD LLFQYAEEAEGRGLEVIIAGAGGAAHLPGMCAAKTHLPVLGVPVQSSMLSGVDSLLSI VQMPAGVPVATLAIGKAGAVNAALLSASILGAKHPQYHEALKQFRANQTETVLDNPDP RDA" misc_feature complement(6106275..6106757) /gene="purE" /locus_tag="PA5426" /note="Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; Region: PurE; COG0041" /db_xref="CDD:439811" gene 6107111..6108139 /gene="adhA" /locus_tag="PA5427" /db_xref="GeneID:877625" CDS 6107111..6108139 /gene="adhA" /locus_tag="PA5427" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase" /protein_id="NP_254114.1" /db_xref="GeneID:877625" /translation="MTLPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVC HTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCE HCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVY KGLKQTNARPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLT VNARQEDPVEVLQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTP IFDVVLKGLHIAGSIVGTRADLQEALDFAGEGLVKATIHPGKLDDINQILDQMRAGQI EGRIVLEM" misc_feature 6107129..6108136 /gene="adhA" /locus_tag="PA5427" /note="Cinnamyl alcohol dehydrogenases (CAD); Region: CAD3; cd08297" /db_xref="CDD:176257" misc_feature order(6107240..6107248,6107255..6107257,6107570..6107572, 6107582..6107584,6107642..6107644,6107648..6107653, 6107654..6107656,6107708..6107713,6107726..6107728, 6107837..6107848,6107855..6107857,6107906..6107914, 6107978..6107986,6108119..6108121) /gene="adhA" /locus_tag="PA5427" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:176257" misc_feature order(6107240..6107242,6107246..6107248,6107273..6107275, 6107309..6107311,6107387..6107389,6107570..6107572, 6107912..6107914,6107984..6107986) /gene="adhA" /locus_tag="PA5427" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:176257" misc_feature order(6107240..6107242,6107309..6107311,6107570..6107572) /gene="adhA" /locus_tag="PA5427" /note="catalytic Zn binding site [ion binding]; other site" /db_xref="CDD:176257" misc_feature order(6107273..6107275,6107408..6107410,6107414..6107419, 6107441..6107449,6107615..6107623,6107684..6107692, 6107696..6107698,6107732..6107734,6107741..6107746, 6107858..6107860,6107882..6107884,6107888..6107890, 6107903..6107905,6107909..6107914,6107939..6107944, 6107957..6107983,6107993..6107998,6108008..6108010, 6108020..6108022,6108029..6108031) /gene="adhA" /locus_tag="PA5427" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:176257" misc_feature order(6107402..6107404,6107411..6107413,6107420..6107422, 6107444..6107446) /gene="adhA" /locus_tag="PA5427" /note="structural Zn binding site [ion binding]; other site" /db_xref="CDD:176257" gene complement(6108176..6109084) /locus_tag="PA5428" /db_xref="GeneID:878602" CDS complement(6108176..6109084) /locus_tag="PA5428" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_254115.1" /db_xref="GeneID:878602" /translation="MNLELKWLEDFIALAGTRSFSQAAEKRFVTQPAFSRRIRSLEDA LGLTLVNRQRTPVELTEAGQLFLVTARSVVEQLGQVVRHLHHLEGGQGEVLQFAAAHS LALGFFPQWIARLRNEGLNIASRLIATNVGEAVHSLREGSCDLMLAFYDPDAALQMDP EIFPSLHLGRTEMLPVCAVNAEGQPLFDLENGQSVPLLAYSASAFLGRGVNLLLRQRN LRYTTVYETAMADSLKSMALQGMGVAWVPRLSVVNELERGELAICGGPQWFVPQEIRL YRCALVRKAAIRLLWRKLEGGLGSVE" misc_feature complement(6108197..6109081) /locus_tag="PA5428" /note="hypochlorite stress DNA-binding transcriptional regulator HypT; Region: PRK10082" /db_xref="CDD:182228" gene 6109260..6110684 /gene="aspA" /locus_tag="PA5429" /db_xref="GeneID:878603" CDS 6109260..6110684 /gene="aspA" /locus_tag="PA5429" /EC_number="4.3.1.1" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="aspartate ammonia-lyase" /protein_id="NP_254116.1" /db_xref="GeneID:878603" /translation="MSPVASSRIEKDLLGTLEVPADAYYGIQTLRAVNNFRLSGVPLS HYPKLVVALAMVKQAAADANRQLGHLPEDKHAAISEACARLIRGDFHEQFVVDMIQGG AGTSTNMNANEVIANIALEAMGHTKGEYKYLHPNNDVNMAQSTNDAYPTAIRLGLLLG HDTLLASLDSLIQAFAAKGVEFAGVLKMGRTQLQDAVPMTLGQEFHAFATTLGEDLDR LRRLAPELLTEVNLGGTAIGTGINADPGYQKLAVERLAAISGQPLKPAADLIEATSDM GAFVLFSGMLKRTAVKLSKICNDLRLLSSGPRTGINEINLPPRQPGSSIMPGKVNPVI PEAVNQVAFEVIGNDLALTLAAEGGQLQLNVMEPLIAYKIFDSIRLLQRAMDMLREHC ITGITANVERCHELVEHSIGLVTALNPYIGYENSTRIAKTALESGRGVLELVREEKLL DEATLADILLPENMIAPRLIPLRA" misc_feature 6109272..6110678 /gene="aspA" /locus_tag="PA5429" /note="aspartate ammonia-lyase; Provisional; Region: aspA; PRK12273" /db_xref="CDD:237031" gene complement(6111048..6112262) /locus_tag="PA5430" /db_xref="GeneID:878604" CDS complement(6111048..6112262) /locus_tag="PA5430" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254117.1" /db_xref="GeneID:878604" /translation="MSVALSAAPERKLAAPLIAFALLVLGGLFLFNAVSARQAILFIV GGALGLTLYHAAFGFTSAWRVFIRERRGAGLRAQMVMLALAVLLFFPALAAGSLFGQP VSGFVSPVGTSVIVGAFIFGIGMQLGGGCASGTLFTVGGGNARMLVTLLFFILGSLIA TQHVGWWFALPSLPPISLVAELGLAPALVLSLAVFIGIAGVTVRMEKARHGTLETPPS VEWRGWRRFLRGPWPLVWGALALALLNFLTLYLAGRPWGITSAFALWGAKIAQGVGLD VGAWAFWQTPANAKALAAPLWEDITSVMDIGIVLGALLAAGLAGRFAPNLDIPRRSLA AAVIGGLLLGYGARLAYGCNIGAYFSGIASGSLHGWLWLVAAFAGNSVGVRVLRPYFF PEERREQGLTGC" misc_feature complement(6111123..6112103) /locus_tag="PA5430" /note="Sulphur transport; Region: Sulf_transp; pfam04143" /db_xref="CDD:461192" gene complement(6112299..6113774) /locus_tag="PA5431" /db_xref="GeneID:879655" CDS complement(6112299..6113774) /locus_tag="PA5431" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_254118.1" /db_xref="GeneID:879655" /translation="MATVLPFDAAGIHLDPAQGLARQLYAALRERILDGRLGSRTRMP ASRELAQALKVSRNTVVRAYEQLHAEGYIDGRTGDGTYVAELQEIPGRAPAVAPSAPA PRGPAALAPPPEGAPRAFRVGVPAFDLFPFDTWARLQARFWRNPPADCLGYGDPAGEA RLRELIAAYLRSARGLRCEAEQVIVTHGAQQAIRLCAQVLLENGDPVAVENPGYRAAR LAFAATGAVPHGIDIDAEGLRSDRLAGIAGCRLAYVTPSHQYPTGVTLSLARRLELLE WAERADGWIVEDDYDGEYRYSGTPLAPLAALDRQGRVLYVGTFCKIAFPALRLGYLVV PPALVERFRQRRAIEVRHSEVGTQRVMADFIAEGHFQRHVRRMRRAARARRDALLWGW PEAPGCQPLPAVEAGLHLCVRVDSLARERALIAAAAAAGVEVSALSDYWMDDSSVAPD DRAGLVLGFAAVPEARIDEALRALRKAWRREALVGPVVATD" misc_feature complement(6112335..6113741) /locus_tag="PA5431" /note="DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; Region: ARO8; COG1167" /db_xref="CDD:440781" gene 6113902..6114351 /locus_tag="PA5432" /db_xref="GeneID:879656" CDS 6113902..6114351 /locus_tag="PA5432" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_254119.1" /db_xref="GeneID:879656" /translation="MSTSLQIRPVGAGDHAAWLPLWEGYQRFYKTEIAAATSDATWQR FLDADEPMNAALAWLDERAVGLVHWIYHRSCWTVGDYCYLQDLFVAEGLRGEGIGRRL IEHVYAEAGAAGCSRVHWLTHESNSDAMKLYERIADKSGFLQYRRIL" misc_feature 6113911..6114306 /locus_tag="PA5432" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" misc_feature 6114136..6114345 /locus_tag="PA5432" /note="Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]; Region: RimI; COG0456" /db_xref="CDD:440224" gene 6114360..6115034 /locus_tag="PA5433" /db_xref="GeneID:877726" CDS 6114360..6115034 /locus_tag="PA5433" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254120.1" /db_xref="GeneID:877726" /translation="MREPLNWRPVATPPHAPLDGRFVKLEPLDPQRHGDDLWDALQGP GADPLLWEYLAYGPFAERPAFDAWLAGQAASRDPLFFAVRERRTQRAVGLLSYLRITP KDGVIEIGHIAFGAPMQRTPGSTEAVYLLAELALGRLGYRRLEWKCNAGNARSLRAAE RLGFTYEGTFRQHMVVKQRNRDTAWFSLLDSEWPARRAAFERWLDPSNFDAEGRQRQT LEALRD" misc_feature 6114408..6114935 /locus_tag="PA5433" /note="Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: RimL; COG1670" /db_xref="CDD:441276" gene complement(6115059..6116312) /gene="mtr" /locus_tag="PA5434" /db_xref="GeneID:877727" CDS complement(6115059..6116312) /gene="mtr" /locus_tag="PA5434" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tryptophan permease" /protein_id="NP_254121.1" /db_xref="GeneID:877727" /translation="MSSSPAQTPSRRPSLLGGSMIIAGTAVGAGMFSLPIAMSGIWFG WSVAVFLLTWFCMLLSGMMILEANLNYPVGSSFSTITRDLLGQGWNVVNGLSIAFVLY ILTYAYISGGGSIIGYTLSSGLGVTLPEKLAGLLFALAVALVVWWSTRAVDRITTLML GGMIITFGLSISGLLGRIQPAILFNSGEPDAVYWPYLLATLPFCLTSFGYHGNVPSLM KYYGKDPQRISRSLWIGTLIALAIYLLWQASTLGTIPREQFKGIIAGGSNVGTLVEYL HRITASDSLKALLTTFSNLAVASSFLGVTLGLFDYLADLCRFDDSHFGRFKTALLTFV PPTIGGLLFPNGFIYAIGFAGLAAAFWAVIVPALMARASRKRFGSPLFRAWGGTPAIV LVLLFGVANAVAHILASLHWLPEYR" misc_feature complement(6115062..6116306) /gene="mtr" /locus_tag="PA5434" /note="Solute carrier families 5 and 6-like; solute binding domain; Region: SLC5-6-like_sbd; cl00456" /db_xref="CDD:444915" gene complement(6116493..6118316) /locus_tag="PA5435" /db_xref="GeneID:877876" CDS complement(6116493..6118316) /locus_tag="PA5435" /EC_number="6.4.1.1" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="pyruvate carboxylase subunit B" /protein_id="NP_254122.1" /db_xref="GeneID:877876" /translation="MSNTIQAKKTGVTDTILRDAHQSLLATRMRTEDMLPICDKLDRV GYWSLEVWGGATFDACVRFLKEDPWERLRKLKAALPNTRLQMLLRGQNLLGYRHYSDD VVRAFVAKAAVNGIDVFRIFDAMNDVRNLRVSIEAVKAAGKHAQGTICYTTSPVHTIE AFVAQGKAMADMGVDSIAIKDMAGLLTPYATGDLVKALKDALPLDVVVHSHDTAGVAS MCQLKAVENGADRIDTAISSMAWGTSHPGTESMVAALRGTPYDTGLDLELIQEIGMYF HAVRKKYHQFESEFTGVDTRVQVNQVPGGMISNLANQLKEQGALNRMGEVLEEIPRVR ADLGFPPLVTPTSQIVGTQAFFNVLAGERYKTITNEVKLYLQGRYGKAPGEVNEQLRR QAIGSEEVIDVRPADLIKPELNKLRSEIGNLAKSEEDVLTYAMFPDIGRKFLEEREAG TLKPEELLPIPTGKGVAAAGAEGTPTEFVIDVHGETYRVDITGVGVKSDNKRHFYLSI DGMPEEVVFEPLNEYVAGSASGRKHASEPGHVSTTMPGNIVDVLVKEGDSVKAGQAVL ITEAMKMETEVQAGIAGTVKAIHVAKGDRVNPGEILIEIAG" misc_feature complement(6116496..6118295) /locus_tag="PA5435" /note="pyruvate carboxylase subunit B; Validated; Region: PRK09282" /db_xref="CDD:236449" gene complement(6118332..6119747) /locus_tag="PA5436" /db_xref="GeneID:877877" CDS complement(6118332..6119747) /locus_tag="PA5436" /EC_number="6.4.1.1" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase subunit alpha" /protein_id="NP_254123.1" /db_xref="GeneID:877877" /translation="MIKKILIANRGEIAVRIVRACAEMGIRSVAVYSEADRHALHVKR ADEAHSIGADPLAGYLNPRALVNLAVESGCDALHPGYGFLSENAELAEICAERGIKFI GPSAQVIRRMGDKTEARRSMIAAGVPCTPGTEGNVADLAEALREAERIGYPVMLKATS GGGGRGIRRCNSREELEQAFPRVISEATKAFGSAEVFLEKCIVNPKHIEAQILADSFG NTVHLFERDCSIQRRNQKLIEIAPSPQLTPEQRAYIGDLAVRAAKAVGYENAGTVEFL LADGEVYFMEMNTRVQVEHTITEEITGIDVVREQIRIASGLELSVKQDDIVHRGYALQ FRINAEDPKNNFLPSFGKITRYYAPGGPGVRTDTAIYTGYTIPPYYDSMCLKLIVWAL TWEEALDRGLRALDDMRVQGVKTTAPYYQEILRNPEFRSGQFNTSFVESHPELTQYSI KRNPSHLAIAIATAIAAHAGL" misc_feature complement(6118377..6119747) /locus_tag="PA5436" /note="acetyl-CoA carboxylase biotin carboxylase subunit; Region: PRK07178" /db_xref="CDD:180865" gene 6119961..6120896 /locus_tag="PA5437" /db_xref="GeneID:877878" CDS 6119961..6120896 /locus_tag="PA5437" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_254124.1" /db_xref="GeneID:877878" /translation="MRMTLRQLQVFRAVCESRSYSRAAEEMALTQPAVSLQIRQLEEL VGQPLFEYVGKKLYLTDAAEALLKTSTDLFQRLESLDMQLSDLKGSLQGQLRLAVESS AKYITPHLFKAFQNLHPEVSLSLTVVNRTQVIKRLADNRDDLVIMSLVPQDMALEFLP FLNNPIIAVAPPDHPLCNAAKLALKDLEPFPLLVREPGSGTRKACEEFFQQRRAHFSQ IQEIASLESLREGVIAGLGLALLPRHAAHQELANGLLRELPVEELPLYRSWCLVHAKG KRLSPVAQAFVAFVREERALISQLAGRFAGPGGSS" misc_feature 6119973..6120152 /locus_tag="PA5437" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 6120240..6120830 /locus_tag="PA5437" /note="The C-terminal substrate binding of LysR-type transcriptional regulator (CbbR) of RubisCO operon, which is involved in the carbon dioxide fixation, contains the type 2 periplasmic binding fold; Region: PBP2_CbbR_RubisCO_like; cd08419" /db_xref="CDD:176111" misc_feature order(6120282..6120287,6120291..6120296,6120303..6120305, 6120315..6120317,6120321..6120341,6120615..6120632, 6120648..6120653,6120657..6120662) /locus_tag="PA5437" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176111" gene complement(6120850..6121065) /locus_tag="PA5440a" /db_xref="GeneID:17373389" CDS complement(6120850..6121065) /locus_tag="PA5440a" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008719786.1" /db_xref="GeneID:17373389" /translation="MPRHSDANAQHVDSKTRRKLEDQRRMQFRRAIEDHCEELRLRQE LADYPELVAAAYLSSNRQGRRSAQRAG" gene complement(6121172..6122053) /locus_tag="PA5438" /db_xref="GeneID:878524" CDS complement(6121172..6122053) /locus_tag="PA5438" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_254125.1" /db_xref="GeneID:878524" /translation="MNLLQHIAQSRQQLRKSELKVADHVLNDPASVMHSSMAELAHGV GVSEPTIVRFCRAIGCSGFQDLKLKLAQSLAAGASFGQFSIHESDSVADFSLKIFDTT LHSLMEVREHLDTHALERAIAAIAHAQRVEFYGFGASGAVASDAQHKFFRLLLSAAAY SDPHMQAMSAVTLKPSDVAICISQSGRSKDLLITANLVREAGATLITLCPSQTPLADL ATVNLAIDVHEDTDIYTPLTSRIAHLVVIDVLAMGVAMARGPDLVNHLKSVKRSLRSL RLSPKVMKNQEERGEPS" misc_feature complement(6121223..6122053) /locus_tag="PA5438" /note="DNA-binding transcriptional regulator HexR; Provisional; Region: PRK11302" /db_xref="CDD:183082" gene 6122139..6123605 /locus_tag="PA5439" /db_xref="GeneID:878525" CDS 6122139..6123605 /locus_tag="PA5439" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate 1-dehydrogenase" /protein_id="NP_254126.1" /db_xref="GeneID:878525" /translation="MSTPATPTSCDILVFGGTGDLALHKLLPALYRLHREDRLPADTR IFALARSALDNAAFLALAERNVRAVVARSEFAAEQWKGFAARLDYLAMDASQSADFGR LARHLKSSEGRVLVHYLATSPSLFAPIAQNLSIAGLAGPQARIVLEKPLGHSLDSARA INQSIGRVFDESRVFRIDHYLGKETVQNLMALRFANALFEPVWRAAHIDHVQISVNET LGVENRGGYYDHAGAMRDMVQNHLLQLLCLVAMEAPVRFDAEAVRNEKLKVLQALKPI SGLDVQDKTVRGQYAAGRIGGQEVPAYYFEKNVDNDSDTETFVALQAEVENWRWAGVP FYLRTGKRMARKCSEIVIQFKPVPHSLIDGGGGPANRLWIRLQPEERISVQLMAKTPG KGMQLEPVELDLNLAEALSRNKRRWDAYERLLLDVIEGDSTLFMRRDEVEAAWGWVDP ILAGWREHYQSPRPYPAGSNGPEQAQLLLELQGRRWLE" misc_feature 6122139..6123602 /locus_tag="PA5439" /note="Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]; Region: Zwf; COG0364" /db_xref="CDD:440133" gene 6123686..6125080 /locus_tag="PA5440" /db_xref="GeneID:877846" CDS 6123686..6125080 /locus_tag="PA5440" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="peptidase" /protein_id="NP_254127.1" /db_xref="GeneID:877846" /translation="MTATTLRPELLCPAGTLKSMRYAFAYGADAVYAGQPRYSLRVRN NDFDHAQLAEGIAEAHALGKRFYVVVNIAPHNAKLKTFLRDLEPVVAMGPDALIMSDP GLIMLVRQHFPQMPIHLSVQANAVNWAAVQFWRQQGLTRVILSRELSLEEIEEIRQQV PDMELEVFVHGALCMAYSGRCLLSGYINRRDPNQGTCTNACRWEYKAVEGREDELGNV VAREPTLGRGAPTEQVFLLEEGNRPGEPMAAFEDEHGTYIMNSKDLRAVQHVERLARI GVHSLKIEGRTKSHYYVARTAQVYRQAIDDAAAGKPFDRGLMDTLESLAHRGYTEGFL RRHVHDEYQNYQHGHSLSERQQFVGELTGERRDGLAEVEVKNRFQRGDSVELMTPRGN LSLRVEDLRNAAGEAIEVAPGNGHVVYLALPEGLDLCYALLMRDLQPGQDTRQPQAER SGGCAGKGACGCAH" misc_feature 6123704..6124999 /locus_tag="PA5440" /note="putative protease; Provisional; Region: PRK15452" /db_xref="CDD:237969" gene complement(6125796..6127997) /locus_tag="PA5441" /db_xref="GeneID:877847" CDS complement(6125796..6127997) /locus_tag="PA5441" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254128.1" /db_xref="GeneID:877847" /translation="MRSKPLLPALLLVGAGLSPLAQASSDDSCYPDWSLVGGGVCDTL PFLAPGNDTRANLRLLLADAGHWRLVEAPPSEEEKLEGYGLVPFGLFRLLPGDGSQPP ALPAASEAETPPPAPAPSPLAELARQMGAEALPEKIAGAEFFEGEGSRCRSNDQDSAL AFLRQVRDAGLGEAETKALANSRLDLLGACGWEQEELGGVLAQGVESAAGKAFATYLE AAANFYSGRFDEAEQGFKALQDVSQPWLKETALYLQARTLLNAAQQNAFDDMGFPELQ NVDKARLEQTRSALEAYLQAYPKGLYAASAKGLQRRVHWLAGDQKLLAQDYAAQFAEA EQGQRNMALEDLVQEVDNKLLTGIQLGDIQTPLLLAVADLVQMRAHDPSTPRSFTWET LQAQQASFAAHPELFAYLQAAYRFYVDQDPAKTLEALPQKVGSLDYVGFSQKTLRGLA LEQQKDWKAAEALWLELLPQAAQPYQKGQLQLALALNYERSGQLEKVFAEASPVQEPL LRSILLRNVADAALLRRQAKQGATAEERDTALFTLLYKDLRRSRFADFGKDFALLGET PSQTKLGTSLGYVYGAGNSLELFRWKGDKAESGYVCPAIAESAAALAADDKDPKGLNC LGEFILRNGLDGMPLDSQPEANELGGTPSGFKGEVYSRLDGYRLVMDNPKAPREDKAY ALFRAINCFAPAGYNTCGQQDIPQAERKQWFRTLKSTYADSSWAKELKYYW" gene complement(6128056..6130911) /locus_tag="PA5442" /db_xref="GeneID:877848" CDS complement(6128056..6130911) /locus_tag="PA5442" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254129.1" /db_xref="GeneID:877848" /translation="MTVHVEPLALPGGSTDVLRLYAREIAIERTRLLYLGSRTPTLLM LLGGVTSACLVWGKVSSWLLGGWLVWLVLLAVLRLLQVAAFQQADSRRQASRHWRRTF LCGAGASGLTLAFAVIMLVPADAFLQQVLVFGLVAAAILSASVAYAVSLPAFLTFALP GLLPSIVFLLLQPHSLLQGWGVLGLILLVALLVVAGQIHRLVQGALLRRFQTQALNLH LERVNAEAEALNRKLAQEVGQRRLVERELRAARDALQRRVEARTEELGATSQALSQSE ARLAMALEASELGLWDWDLESGRVQHSYLEAVFSDAGDGPEDYRRLIESIHPGDLPRI RRALAEHLKGRSELYRVEYRVRDREGGWRWLEDRGRAMARDPRGRVTRMLGTRSDISA RKRLEEQQQLAATVFEAASESIVILDPAYNLLAVNQAFSRITGYRREDVVGRNASLLV NTPEAQRHYRQIRAELRQHGQWQGELVDTRKNGDPYPQWLQLNLLRDGNGEATHIVGF FTDLSARRDVEERLRHLLHYDELTGLANRRLFRERLHEAAQRARQEEGGLALLLIDLD RFKLLNDSLGHEVADQLLREMAQRLRRTAPEANTLARLAGDEFAILLDGGTGTAALSR LAERLLVQLRQPVSVLGHELILGASLGISLFSEQAREISVLMSQANLAMQHAKQLGGN TFQFFRDNLQDSTLERLRLETRLRKAVEEGQLDVHYQPKLCLASARPDSVEALVRWHH PEEGMIPPSTFIGLAEECGLIGEIGEFVLRRACLQAAEWSQRGLNLRVSVNLSVHQLR QGDLLDVVRSALADSGLPAAQLELELTESQWLDALDSVLATFRQLREMGVKLSVDDFG TGYSSLSYLKRLPLDYLKIDQSFVRDLTQNSEDAAIIRAIIAMAHSLDLKVVAEGVET IEQRDFLVAQRCDELQGYLIGRPLPAHALEEGLRQAR" misc_feature complement(6128059..6130068) /locus_tag="PA5442" /note="Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain [Signal transduction mechanisms]; Region: COG5001" /db_xref="CDD:444025" gene 6131088..6133274 /gene="uvrD" /locus_tag="PA5443" /db_xref="GeneID:877766" CDS 6131088..6133274 /gene="uvrD" /locus_tag="PA5443" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA-dependent helicase II" /protein_id="NP_254130.1" /db_xref="GeneID:877766" /translation="MNDDLSLLLNSLNDPQRQAVAAPLGRQLVLAGAGSGKTRVLVHR IAWLIQVEHASPYSILSVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRA HWREAGLSENFQILDSDDQQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQH IQPGGDLFLATMLKIYEAYEAACARAGVIDFSELLLRALDLWRDHPGVLEHYQRRFRH ILVDEFQDTNAVQYAWLRILAKGGDSLMVVGDDDQSIYGWRGARIENIQQFSDDFADA EVIRLEQNYRSTASILKAANALIANNQGRLGKELWTDGEDGESLSLYAAFNEHDEARY VVESIESALKGGLARSEIAILYRSNAQSRVLEEALLREKIPYRIYGGQRFFERAEIKN AMAYLRLLDGRGNDAALERVVNVPARGIGEKTVESIREFARGNDVSMWEAIRLMIANK VLPGRAASALTGFVELIENLSAKVMDMPLHLMTQTVIEQSGLISYHKEEKGEKGQARV ENLEELVSAARAFENSEEEEDLTPLQAFLSHASLEAGETQADAHEDSVQLMTLHSAKG LEFPLVFLVGMEEGLFPHKMSLEESGRLEEERRLAYVGVTRAMQRLVLTYAETRRLYG SETYNKVSRFIREIPPALIQEVRLSNTVSRPYGGTSRSAGGNLFSGAGVPETPFSLGQ RVRHALFGEGTILNFEGAGAQARVQVNFESEGSKWLMLGYAKLEAL" misc_feature 6131130..6133271 /gene="uvrD" /locus_tag="PA5443" /note="DNA-dependent helicase II; Provisional; Region: uvrD; PRK11773" /db_xref="CDD:236976" gene 6133312..6133740 /locus_tag="PA5444" /db_xref="GeneID:877767" CDS 6133312..6133740 /locus_tag="PA5444" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254131.1" /db_xref="GeneID:877767" /translation="MLASWAFWALLSALFAALTAIFAKIGLDRVDSDFATFIRTLVIL VTLGGILAVLGKFQAPGSILPRSWLFLVLSGLATGASWICYFRALKLGPASLVAPLDK FSVVLVALLGVAFLGERLDLRQWLGVALVTAGVVVLAIRP" misc_feature 6133321..6133734 /locus_tag="PA5444" /note="Riboflavin transporter RibN, EamA domain [Coenzyme transport and metabolism]; Region: RibN; COG2510" /db_xref="CDD:442000" gene 6133838..6135331 /locus_tag="PA5445" /db_xref="GeneID:878025" CDS 6133838..6135331 /locus_tag="PA5445" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="coenzyme A transferase" /protein_id="NP_254132.1" /db_xref="GeneID:878025" /translation="MYRDRVRLPSLLDKVMSAAEAADLIQDGMTVGMSGFTRAGEAKA VPQALAMRAKERPLRISLMTGASLGNDLDKQLTEAGVLARRMPFQVDSTLRKAINAGE VMFIDQHLSETVEQLRNHQLKLPDIAVIEAAAITEQGHIVPTTSVGNSASFAIFAKQV IVEINLAHSTNLEGLHDIYIPTYRPTRTPIPLTRVDDRIGSTAIPIPPEKIVAIVIND QPDSPSTVLPPDGETQAIANHLIDFFKREVDAGRMSNSLGPLQAGIGSIANAVMCGLI ESPFENLTMYSEVLQDSTFDLIDAGKLRFASGSSITLSPRRNADVFGNLERYKDKLVL RPQEISNHPEVVRRLGIIGINTALEFDIYGNVNSTHVGGTKMMNGIGGSGDFARNAHL AIFVTKSIAKGGNISSVVPMVSHVDHTEHDVDILVTEQGLADLRGLAPRERARVIIEN CVHPSYQAPLLDYFEAACAKGGHTPHLLREALAWHLNLEERGHMLAG" misc_feature 6133877..6135316 /locus_tag="PA5445" /note="succinate CoA transferase; Region: YgfH_subfam; TIGR03458" /db_xref="CDD:274588" gene 6135709..6135912 /locus_tag="PA5446" /db_xref="GeneID:878026" CDS 6135709..6135912 /locus_tag="PA5446" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254133.1" /db_xref="GeneID:878026" /translation="MERTLGSNTFDIARSNRRSSSLLGTMKLWQRRIQSRRQLARLDS RLLADAGISEAQRYAELNKPFWR" misc_feature 6135733..6135909 /locus_tag="PA5446" /note="Uncharacterized conserved protein YjiS, DUF1127 family [Function unknown]; Region: YjiS; COG5457" /db_xref="CDD:444208" gene complement(6135968..6137113) /gene="wbpZ" /locus_tag="PA5447" /db_xref="GeneID:878012" CDS complement(6135968..6137113) /gene="wbpZ" /locus_tag="PA5447" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glycosyltransferase WbpZ" /protein_id="NP_254134.1" /db_xref="GeneID:878012" /translation="MRVLHFYKTYLSETVGGIEQVIFQLCESSGSWGIDNHVLTLSSD PHPPVVPFGGHVVHRARLDLQLASTGFSLSVFKQFRELAAEADVVNYHFPWPFMDLVH FLTGMNKPSVVTYHSDIIRQRVLLKLYRPLMSRFLHSVDRIVAASPNYFSTSDVLRQY REKTRVITYGLDKDGYPKPATQRLEHWREKLGPRFFLFVGVMRYYKGLHILLDALQGT DYPVVIVGAGPLQAELYAQAAALGLRNVHFLGRVDDEDKVALLQLSYAMVFPSHLRSE AFGISLLEGAMYGKPMISSEIGTGTSYINIHGETGLVVPPSQPAAFRQAMRWLWEHPQ QAEEMGRNAEARYRQLFTAEEMGRRWSELYRELLEEKASSRYVKAAR" misc_feature complement(6136046..6137110) /gene="wbpZ" /locus_tag="PA5447" /note="Escherichia coli alpha-1,3-mannosyltransferase WfcD and similar proteins; Region: GT4_WfcD-like; cd03795" /db_xref="CDD:340826" misc_feature complement(order(6136271..6136273,6136343..6136345, 6136511..6136519,6137063..6137065)) /gene="wbpZ" /locus_tag="PA5447" /note="putative ADP-binding pocket [chemical binding]; other site" /db_xref="CDD:340826" gene complement(6137114..6138241) /gene="wbpY" /locus_tag="PA5448" /db_xref="GeneID:878013" CDS complement(6137114..6138241) /gene="wbpY" /locus_tag="PA5448" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glycosyltransferase WbpY" /protein_id="NP_254135.1" /db_xref="GeneID:878013" /translation="MRIAVNARILQAPRTGIGHYLVELLGALQAHADFEFSLFHGWGW SGDLPAAALPGYSRLSPWLRNLPGAYRARRWLEQRRFDSGRPPVDLYHEPSLWPLDFD GPMLMTLHDLTHLHYPATQPAARLREIERRLARGMEKARLILTDSQAIADEAQAYFGL PRERFVVAPLGHAARFRPRDRESLREPLRAHGLVPRGYFLCVGTLEPRKNLSLALRAH GQLPAAVRQRFPLMIVGMPGWESRSLDDELRQALASGTVRLLGYLPDERVAELMSGAR ALVFPSIYEGFGLPVLEAMASGTPVLLTRLSAMPEVAGEAGSYIDPDDANGLSDMLVR MTEDTVYWECCREAGLRRAEQFSWKRCANLTAAAYRRAVEG" misc_feature complement(6137141..6138238) /gene="wbpY" /locus_tag="PA5448" /note="glycosyltransferases MtfB, WbpX, and similar proteins; Region: GT4_MtfB-like; cd03809" /db_xref="CDD:340838" protein_bind 6137261..6137273 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075.; Evidence of regulation for: PA5447" /bound_moiety="AmrZ" gene complement(6138225..6139607) /gene="wbpX" /locus_tag="PA5449" /db_xref="GeneID:878014" CDS complement(6138225..6139607) /gene="wbpX" /locus_tag="PA5449" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="glycosyltransferase WbpX" /protein_id="NP_254136.1" /db_xref="GeneID:878014" /translation="MTRLLVECTYVFEHPKVNSGIQRVVRNVIRELPEADETVECIPV AMLDGTLYQVHSLAPLDPRPHSPLVRLRILVERAANYFWLGQRTLEKRRPFRSSPWAR RLLYVACRLFAFAFLSIPLRLLDRILGKQQPAPVRATPLEHRAGDQLVLLDSSWHADF FPLAERLKSEGVGIVSVIYDLIPLTHPQFCDAGLVKVFNHWFDWIAATADGYVAISET IRDEVRAEMLRRIGPEKVAQRWFDYFHLGSELDLVEDGASVEPDLLRMFKAKAPVFLM VSTIEPRKNHGYLLDAFERAWAQGSQARLCIAGRIGWKCEALVERVRQHPELNKRLFM FNDLSDKSLEYAYSHAASLVFPSYVEGFGLPLVEAMQRGLPAMGSDIPVFREIGGEFM AYFDLADPQTLANLVTRFEATGEFPAERPVGEWRWIGWHEASRQLIARILLALGKAPA HGEAVHADCG" misc_feature complement(6138291..6139601) /gene="wbpX" /locus_tag="PA5449" /note="glycosyltransferases MtfB, WbpX, and similar proteins; Region: GT4_MtfB-like; cd03809" /db_xref="CDD:340838" gene complement(6139604..6140869) /gene="wzt" /locus_tag="PA5450" /db_xref="GeneID:883117" CDS complement(6139604..6140869) /gene="wzt" /locus_tag="PA5450" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_254137.1" /db_xref="GeneID:883117" /translation="MGQIRVSGLGKAYKQYPNRWSRLFEWLVPFSPPRHHLHWILREV EFTIEPGEAVGIVGVNGAGKSTLLKMIAGTTQPTCGEIRVAGRVAALLELGMGFHPDF TGRQNVFMAGQLLGMQVEEIQALMPDIEAFAEIGEAIEQPVRTYSSGMQMRLAFSVAT ARRPDILIVDEALSVGDAYFQHKSFERIRSFRKAGTTLLIVSHDRSAIQSICDSAILL EQGRMAMRGRPEEVMDYYNALLAEREGQTVRQEMLADGQVRTISGTGEAAILDVRMVD QRQRALEVVEVGQAVTLEVEVEVRQDIERLILGFMIKDRLGQPMYGINTHRLDKALTD LKAGERITYRFAFDMRLGKGHYSVALSLSRLDSHLDRNFEWRDYGLVFHVINNRQEDF VGCSWLGAETHISRSGEAALDPTSAESTP" misc_feature complement(6140138..6140860) /gene="wzt" /locus_tag="PA5450" /note="ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism]; Region: TagH; COG1134" /db_xref="CDD:440749" misc_feature complement(6139667..6140095) /gene="wzt" /locus_tag="PA5450" /note="C-Terminal domain of O-antigenic polysaccharide transporter protein Wzt and related proteins; Region: Wzt_C-like; cd10147" /db_xref="CDD:199902" misc_feature complement(order(6139736..6139741,6139745..6139747, 6139787..6139789,6139898..6139900,6139943..6139945, 6140084..6140086)) /gene="wzt" /locus_tag="PA5450" /note="putative carbohydrate binding site [chemical binding]; other site" /db_xref="CDD:199902" gene complement(6140869..6141666) /gene="wzm" /locus_tag="PA5451" /db_xref="GeneID:883118" CDS complement(6140869..6141666) /gene="wzm" /locus_tag="PA5451" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="LPS efflux transporter membrane protein" /protein_id="NP_254138.1" /db_xref="GeneID:883118" /translation="MLLGLSRSLWGYRGFVLGSVKREFQSRYRGSLFGALWTVLNPLS MIVVYTVIFSQVMRARLPGVDDGLAYSVYLCAGLLTWGLFAEITSRSQSMFIENANLL KKISFPRICLPVIVLLNAGVNFAIILALFLGFLALSGRLPGAALLALVPLLAIQVLFA AGLGMILGVLNVFFRDVGQLFGICLQFWFWLTPIVYPIGILPEGIRSLIELNPMTALM RSYQQLFLHGQWPDWPSLLPITLLALLLCALGLRLFRQRVGEMVDEL" misc_feature complement(6140962..6141648) /gene="wzm" /locus_tag="PA5451" /note="ABC-type polysaccharide/teichoic acid/polyol phosphate export permease [Carbohydrate transport and metabolism]; Region: TagG; COG1682" /db_xref="CDD:441288" gene complement(6141666..6143105) /gene="wbpW" /locus_tag="PA5452" /db_xref="GeneID:883088" CDS complement(6141666..6143105) /gene="wbpW" /locus_tag="PA5452" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="phosphomannose isomerase/mannose-1-phosphate guanylyl transferase" /protein_id="NP_254139.1" /db_xref="GeneID:883088" /translation="MLIPVVLSGGAGTRLWPVSREGQPKPFMRLPDGQTLLGKTYRRA AGLLAGHGEIVTVTNREHYFQSKDQFHAARLGRHRGHFILEPTGRNTAPAIAVAALAL QAEHGDAAVLVVMPADHLIRNEEAFREAVGHAARLAVAGHLVTFGVVPDAAETGFGYI ELGDRLDEQGAAKVRRFVEKPDEETARRYVESGGFLWNSGMFCFTASTLVDELAQHAP ALLEQARACLAASAAVKMADGIQHELAGEAFAALPDISIDYALMERSARVAVVPAAFD WSDIGSWGAMSALLDADAEGNRGSGDTLFVDTRNTFVQSDGRLVATVGVDDLVVVDTS DALLIARADRVQEVRRVVQRLKDERHEAYRLHRTVNRPWGSYTVLEEGPRFKIKRIVV RPGERLSLQMHHHRSEHWIVVQGMARVTNGDGARLVNSNESTYIPAGHRHRLENPGVI DLVMIEVQSGEYLGEDDIVRFEDQYGRVV" misc_feature complement(6141675..6143102) /gene="wbpW" /locus_tag="PA5452" /note="Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Region: Glyco_tranf_GTA_type; cl11394" /db_xref="CDD:472172" misc_feature complement(order(6142752..6142754,6143079..6143081, 6143085..6143087)) /gene="wbpW" /locus_tag="PA5452" /note="Substrate binding site [active]" /db_xref="CDD:133003" gene complement(6143109..6144080) /gene="gmd" /locus_tag="PA5453" /db_xref="GeneID:883089" CDS complement(6143109..6144080) /gene="gmd" /locus_tag="PA5453" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="GDP-mannose 4,6-dehydratase" /protein_id="NP_254140.1" /db_xref="GeneID:883089" /translation="MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRL RELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDG LGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWI TVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKR DWGFAGDYVEAMWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPA FFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRRVSRE" misc_feature complement(6143118..6144074) /gene="gmd" /locus_tag="PA5453" /note="GDP-D-mannose dehydratase [Cell wall/membrane/envelope biogenesis]; Region: Gmd; COG1089" /db_xref="CDD:440706" gene complement(6144077..6144991) /gene="rmd" /locus_tag="PA5454" /db_xref="GeneID:883037" CDS complement(6144077..6144991) /gene="rmd" /locus_tag="PA5454" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="oxidoreductase Rmd" /protein_id="NP_254141.1" /db_xref="GeneID:883037" /translation="MTQRLFVTGLSGFVGKHLQAYLAAAHTPWALLPVPHRYDLLEPD SLGDLWPELPDAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFSGTFLY ISSGDVYGQVAEAALPIHEELIPHPRNPYAVSKLAAESLCLQWGITEGWRVLVARPFN HIGPGQKDSFVIASAARQIARMKQGLQANRLEVGDIDVSRDFLDVQDVLSAYLRLLSH GEAGAVYNVCSGQEQKIRELIELLADIAQVELEIVQDPARMRRAEQRRVRGSHARLHD TTGWKPEITIKQSLRAILSDWESRVREE" misc_feature complement(6144101..6144982) /gene="rmd" /locus_tag="PA5454" /note="A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous...; Region: Rossmann-fold NAD(P)(+)-binding proteins; cl21454" /db_xref="CDD:473865" misc_feature complement(order(6144509..6144520,6144587..6144589, 6144599..6144601,6144677..6144685,6144806..6144814, 6144950..6144952,6144956..6144961,6144965..6144967)) /gene="rmd" /locus_tag="PA5454" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187570" misc_feature complement(order(6144587..6144589,6144599..6144601, 6144677..6144679,6144752..6144754)) /gene="rmd" /locus_tag="PA5454" /note="active site" /db_xref="CDD:187570" protein_bind 6145390..6145402 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 6145399..6147027 /locus_tag="PA5455" /db_xref="GeneID:883038" CDS 6145399..6147027 /locus_tag="PA5455" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254142.1" /db_xref="GeneID:883038" /translation="MNFILYSDINERSIGHNLGRPEYSYYFVLKAYRPILESLGQVHL VQSTDEVDPLYRQLHEQGEDCLFLSFTPPHKAARGLQCPMLCVVAWEFETIPDVAWDG DPAQDWSQVLAGHGAAITLSEQTARAVRRVLGEDFPVLALPTPIWEDFAAIRQQGERN PVKSGETLQLKGCVIDSRLLGLSADGLIAPIREETEDEILEVLPETPAEPEPEPVPEP EPEPEPVPLDWRRRLVISKHYLLLWYREAVSDLVPIPVRRWLFRHLRRPLPPPPTALE TLPEPLPQAIEPMPPAEPEHPPALLPAVDQHQQVVVDGVVYVSVFNPLDGRKNWHQLI TAFCWAFRDTSDATLVLKMTQSDLTTYHVELLTLLSQLSPFACRVIALHGYLDAAEYA RLYGAASYYVNASRCEGLCLPLMEFMSCGTPAIAPDHSAMADYMDAQVGFVVRSSQEP AAWPQDSRRLYSTRRYRPSWESLKEAYLESYRVAREQPERYRQLSAAANQRMRGYCAG DVVRQRLEPFLSARKATPAPGVELAATATGNVPC" misc_feature <6146368..6146844 /locus_tag="PA5455" /note="glycosyltransferase family 1 and related proteins with GTB topology; Region: Glycosyltransferase_GTB-type; cl10013" /db_xref="CDD:471961" gene 6147021..6148322 /locus_tag="PA5456" /db_xref="GeneID:883022" CDS 6147021..6148322 /locus_tag="PA5456" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254143.1" /db_xref="GeneID:883022" /translation="MLIIIHSETNKTTIRQNLGRPEYSYYFVLKEFRPLLEEIGQVVE VSDPDELVDRLYHDCRKRGEPCVFLSFSPPHRTPIHHACPTIPVFAWEFSTLPSETWH GEPRHDWRHVLRHSGRAITHSSFTVDVVRAAMGRDYPVLSVPAPVWDRFANRASQQAG RPEARDVRLRLDGLLVDSRQLDLAVHADPEPSAEVLALPDRAAKQVELSLDGVIYTSV FNPYDGRKNWQDMISAFCATFRDEPDATLVLKLTHHNVGEALADMLHHLYKNQSYRCR IVLIHGYLADPDYERLVEATSYVVNTSYGEGQCLPLMEFMSSGKPAVAPRNTAMIDYI DADNAFIVDSSEEATAWPHDPRAAYRTLRYITDWESLCRAYRASFEVARQEPERYARM SAHASASLERFCSRKLAVERLRRFFDEAAQGDPSALQSIPA" misc_feature <6147693..6148271 /locus_tag="PA5456" /note="glycosyltransferase family 1 and related proteins with GTB topology; Region: Glycosyltransferase_GTB-type; cl10013" /db_xref="CDD:471961" gene 6148319..6149182 /locus_tag="PA5457" /db_xref="GeneID:883023" CDS 6148319..6149182 /locus_tag="PA5457" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254144.1" /db_xref="GeneID:883023" /translation="MIRALLQRWRSRPAAASEPVSPRMCGLRDAVLDGWFRSETGELL AGFAIGAQDTLLDLGCGEGVATLFAARQGASVIFTDSEEDKVRSLAQQVEAVARRPFT GLVSDSDPLPLRDACADKLVCMEVLEHVANPARVMAELVRLGRPGAQYLLSVPDPVGE HLQQGIAPADYFRAPNHIHIFSRDDFARLVQDAGLVIEHRQASGFFWVMGMIFFWASE RAAGRELGGAVRDRIQPPYPALMEDWARLWENLLARPDGLEIKHLLDHFMPKSQVIIA RKPLDPGSSRT" misc_feature 6148415..6148786 /locus_tag="PA5457" /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase [Coenzyme transport and metabolism]; Region: UbiG; COG2227" /db_xref="CDD:441829" misc_feature <6148634..6148996 /locus_tag="PA5457" /note="Predicted SAM-depedendent methyltransferase [General function prediction only]; Region: COG4627" /db_xref="CDD:443666" gene 6149179..6150321 /locus_tag="PA5458" /db_xref="GeneID:879496" CDS 6149179..6150321 /locus_tag="PA5458" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="acyltransferase" /protein_id="NP_254145.1" /db_xref="GeneID:879496" /translation="MSGKRILDIELLRGLAVLGVVFHHLHGNLFSGSPALLDGINQRV QFWWGVDLFFAISGFVIARTLIPQLREAPTRQAFWEQARYFWIRRAFRLLPSAWLWLA LILACCLLLNRSGAFGSLSANLAASLAGFLQVANFRFADSFYRYEYGASFVYWSLSLE EQFYLLLPLLILCLRRYLGWALLALVLVQFFSLRTPLLMVLRTDALAIGVLLALASLQ PGYARWNPTLLGRAWSGPLLLAAVAAALGVLASEAYSLVAVRIGAIALLCGLLVWIAS YDRDYLLSNGPLKRLLVWVGARSYAIYLIHIPAFYLSRELCFRLGWDAGERPLSLLGT SLVLIVVLSELNYRFVESPCRDLGSRLVKRLSAARRVATTSGATSC" misc_feature 6149179..6150282 /locus_tag="PA5458" /note="Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains [Cell wall/membrane/envelope biogenesis]; Region: OafA; COG1835" /db_xref="CDD:441440" gene 6150315..6151151 /locus_tag="PA5459" /db_xref="GeneID:879497" CDS 6150315..6151151 /locus_tag="PA5459" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254146.1" /db_xref="GeneID:879497" /translation="MLNFLKKIVSPPSPATEPVAAPPAPAPVDPYMLGLRDAVLSGWF NQETDELFSGFPISAEDTVLDVGCGDGGNVHFCAMRGARIIIADIDAEKIARTRERLA DTPARELECLVSDCDPLPLADATATRVVSTEVIEHVDDPRQFLAELVRVGQPGALYLL SVPHPTSEDLQKDFAADEYFRKPNHIRVLGEEQFAALVREAGLEILSHSRYGFYWSLW MLLFWEAKVDFGNPDHPLLEHWARTWQALLDSPRGPAIKQALDAVVAKSQVIIARKPA QA" misc_feature 6150459..6150842 /locus_tag="PA5459" /note="Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Region: UbiE; COG2226" /db_xref="CDD:441828" gene 6151314..6151526 /locus_tag="PA5460" /db_xref="GeneID:879298" CDS 6151314..6151526 /locus_tag="PA5460" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254147.1" /db_xref="GeneID:879298" /translation="MRTSPHPHAGSSSGLPAAHPHLAALLEKLNSWRQNARSRKHLAQ MSEHDLADLAISPSERYVEISKPFWR" misc_feature 6151365..6151523 /locus_tag="PA5460" /note="Uncharacterized conserved protein YjiS, DUF1127 family [Function unknown]; Region: YjiS; COG5457" /db_xref="CDD:444208" gene 6151622..6151939 /locus_tag="PA5461" /db_xref="GeneID:879299" CDS 6151622..6151939 /locus_tag="PA5461" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254148.1" /db_xref="GeneID:879299" /translation="MKRLRLIGAAALLACASSAFASSFVVTTDTLVRATGMTSNATSD ITNSFRDDKIVLEARDDAASFVASQGDIRGSHLEAALRHIRGKLPSLAANDMQLAQAI LTI" misc_feature 6151622..6151936 /locus_tag="PA5461" /note="conserverd hypothetical protein; Region: TIGR02448" /db_xref="CDD:274137" gene 6152064..6152357 /locus_tag="PA5462" /db_xref="GeneID:879300" CDS 6152064..6152357 /locus_tag="PA5462" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254149.1" /db_xref="GeneID:879300" /translation="MRYRFSLLFCCLLAPAAHAFDTTTAFTAKSLYVTSKLTSTPFEN KLLRDARGDAASFVASDGSIRGARLEAALRWLRVAHPELAASDQELAEAILAQ" misc_feature 6152064..6152354 /locus_tag="PA5462" /note="conserverd hypothetical protein; Region: TIGR02448" /db_xref="CDD:274137" gene 6152386..6152721 /locus_tag="PA5463" /db_xref="GeneID:879367" CDS 6152386..6152721 /locus_tag="PA5463" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254150.1" /db_xref="GeneID:879367" /translation="MRRSSMRHSPLFAALLLALCATAAEARSVVATSNIIVRALDRSI DFTSDTTTSVRDMKVVTEARDDAASFVASDGAIRGAQLEAAMRTLRSRLPEAREASDQ VLAEAILAL" misc_feature 6152401..6152718 /locus_tag="PA5463" /note="Protein of unknown function (DUF2388); Region: DUF2388; cl23999" /db_xref="CDD:451651" gene 6152718..6154676 /locus_tag="PA5464" /db_xref="GeneID:879368" CDS 6152718..6154676 /locus_tag="PA5464" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254151.1" /db_xref="GeneID:879368" /translation="MRKACAWLLALALCGAGNATAALRLKLDAPGLDPAQREASQQLL DEAADKLPPAFRERLDREIEVEWRDDLPANGMGQARGPQRIALNRKYLADLTDGSAAS RQTGRVHGTERRELLATLLHELTHVYDRARLWSAEEKREIRRCTRQEETLGRIAQPTD CRGQSGRRFTLSDDPRLLDLAGWPQRTGQRGRREAHNGFVLRSPDVYELSNPREFVAV NMEYFLLDPSYACRRPALYRYYQQRFGWAPEHSACAQSFAYLNAGRDFGQQPLGQLDP ERVYEVDYLLAEANDNLVSRWGHTMLRLVICAPGRPRGPDCRLDLDQHLVLSYRAFVG DLQLSSWDGLTGAYPSRLFVLPLSQVIEEYTKVELRSLASVPLKLDREEVASLVERAA QSHWSYDGQYYFISNNCAVETLKLLRSGIPRRPLQSLDSITPYGVLEMLENRKLADPS VLDDPKEALRLGYRFDSFRDRYQAMFDVLKQRLHIPQDKVEDWLALPARERQPWFAKA DLRASAALLLLEQASLRRQLLLAQDELKRLYLGHLDKPAGDQRLEVAGKTFQQILDDS GFLSRPAELLEGGYGLPQAAEWKHLEEQTRERQARLRRLSDDLDREVRALLDPERRAE LEANEANIKEVGAHLRELHKAAGGLMLP" misc_feature 6153528..6154043 /locus_tag="PA5464" /note="Domain of unknown function (DUF4105); Region: DUF4105; pfam13387" /db_xref="CDD:433167" gene complement(6154784..6155203) /locus_tag="PA5465" /db_xref="GeneID:879736" CDS complement(6154784..6155203) /locus_tag="PA5465" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254152.1" /db_xref="GeneID:879736" /translation="MPETHTGGCHCGYLRYAVAAPLDDVAHCHCSICRRTTGGIVTTW ATVPRAAFRWLAGEPAEYASSASCTRYFCPRCGANLALFTRLSADTLDFTVASLDHPE RAPANRHIWVGSRLPWLHLDPQLPEEDEEFIAGADDP" misc_feature complement(6154814..6155197) /locus_tag="PA5465" /note="Uncharacterized conserved protein [Function unknown]; Region: COG3791" /db_xref="CDD:443005" gene 6155271..6156215 /locus_tag="PA5466" /db_xref="GeneID:879737" CDS 6155271..6156215 /locus_tag="PA5466" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254153.1" /db_xref="GeneID:879737" /translation="MSGFHYPGVPVTALLYSLWPLFALIVGGYALRRWDFPGEAFWPA AERLNYFILFPALLFSNLATAPLDDPGLARQALAVLLGLGVAWLALLLCKRWRGWDAG RFGAIAQGVLRFNTYLGLAAVGSLYGKPGLTLAALMLALMVPTVNVMSVWALTAERGI SLRALLLPILKNPLILACLAGALVNLAGVGLPGGSDRLLNLLAVASLPLGLLCVGAAL KPQELGGEVAALGWNCAARLLAMPLLAFAIARGLGLPSMESAVLVLFFALPTAPTAYV LTRQLGGDGHLMAGIITLQTLLSGATLVGVLLVLQGSP" misc_feature 6155304..6156203 /locus_tag="PA5466" /note="Predicted permease, AEC (auxin efflux carrier) family [General function prediction only]; Region: YfdV; COG0679" /db_xref="CDD:440443" gene 6156212..6156574 /locus_tag="PA5467" /db_xref="GeneID:879738" CDS 6156212..6156574 /locus_tag="PA5467" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254154.1" /db_xref="GeneID:879738" /translation="MTTGRVAAALTALCLLCQPAFGFIKVFPEFDDEPGAATFFWAAV TTVGPFIGSTVSAQESSADEGDKLVQARDDAASFVASDGAIRGAYLQAALQVLRQAPE YAGYSDLQLAAALLARQP" misc_feature 6156317..6156511 /locus_tag="PA5467" /note="Protein of unknown function (DUF2388); Region: DUF2388; cl23999" /db_xref="CDD:451651" gene 6156854..6158158 /locus_tag="PA5468" /db_xref="GeneID:879438" CDS 6156854..6158158 /locus_tag="PA5468" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="citrate transporter" /protein_id="NP_254155.1" /db_xref="GeneID:879438" /translation="MLTLLAFAMVATFMFLIMTKRLSALIALILVPIAFALIGGFAAG LGPMMLDGIRTLAPTGVMLMFAILYFAIMIDSGLFDPAVRKILRLVKGDPLKVSLGTA ALAMIVSLDGDGSTTYMICVAAVLPLYSRLGMSPLVMACLIMLSSGVLNMTPWGGPTA RAASALHVDPADIFVPMIPAMIAGLLAIFAIAWIYGKRERARLGELHLPTDHEDLAEI SVSQYPEARRPKLLWFNAILTVVLMATLIAGLLPMPVLFMIAFGIAMIVNYPCIQEQK KRIGAHAENILAVVSLIFAAGVFTGILSGTGMVDAMSKSLLAVIPPALGPYLATITAL VSMPFTFFMSNDAFYYGVLPILTQAAAEYGITPVEMARASIVGQPVHLLSPLVPSTYL LVGLAKIDFGDHQRFTLKWAVLVCLAILAMALLLGLFPLFSN" misc_feature 6156854..6158146 /locus_tag="PA5468" /note="Mg2+/citrate symporter [Energy production and conversion]; Region: CitM; COG2851" /db_xref="CDD:442099" gene 6158179..6158943 /locus_tag="PA5469" /db_xref="GeneID:879439" CDS 6158179..6158943 /locus_tag="PA5469" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254156.1" /db_xref="GeneID:879439" /translation="MEWLTSPEIWIAFFTLTALEIVLGIDNIIMISILVGRMPKHLQP RTRFFGLALAMVTRILLLLSITWVMRLTADLFHLFGQGISGRDLILFFGGLFLLWKSS SEIYQGLEGEEESGDEPKGSAGGFIGTIIQIAIIDIVFSLDSVITAVGMVSHVPVMVA AIIVAVLVMMLCAGAISDFIDKHPSLKMLALSFLIVVGTVLIAEAFEVHVPKGYVYFA MAFSLAVEALNIRMRGAAARKRGEEPVKLRKEVLGD" misc_feature 6158179..6158898 /locus_tag="PA5469" /note="Tellurite resistance membrane protein TerC [Inorganic ion transport and metabolism]; Region: TerC; COG0861" /db_xref="CDD:440622" gene complement(6158949..6159563) /locus_tag="PA5470" /db_xref="GeneID:877631" CDS complement(6158949..6159563) /locus_tag="PA5470" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="peptide chain release factor-like protein" /protein_id="NP_254157.1" /db_xref="GeneID:877631" /translation="MILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVA GERPRTWRSLLLGLRGTAAEALAERWCGGIQWICPSPYRARHARKNWFIGAERFAAPP ASLEGEIRFETLRSSGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILL IARRLADQASSAADALRAERRRAHGRISRGAARRVFRGERFEPA" misc_feature complement(6158961..6159560) /locus_tag="PA5470" /note="putative peptide chain release factor H; Region: release_prfH; cl46215" /db_xref="CDD:480555" gene complement(6159560..6160699) /locus_tag="PA5471" /db_xref="GeneID:877632" CDS complement(6159560..6160699) /locus_tag="PA5471" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254158.1" /db_xref="GeneID:877632" /translation="MGNYIKPLSAGVALIASDSTWIEGKAIQQLQTTAELDGMCRVVG LPDLHPGRGYPVGAAFFSVGRFYPALVGNDIGCGMALWETGLALGKLSADKLEKRLGN LDLPLDETWSDCIEALDLPAREHWRALGTIGGGNHFAELQQVETVFDQAALHALGLDA DRLQLLVHSGSRGLGQAILQEHVSLHGHAGLLDGSLEASAYLARHADALRFAEGNRQL IARRILERLRCDGLELLDINHNLVVPAQVDGVDGWLHRKGATPADQGVLVIPGSRGDY SYLVEPVPSAQSLFSLAHGAGRKWQRGECRERLAARFSVDQLGRTRLGSRVICGDRQL IYEEAPEAYKGIDSVVGALLEAGLLRLVARLKPVLTYKTRGECCR" misc_feature complement(6159572..6160699) /locus_tag="PA5471" /note="hypothetical protein; Reviewed; Region: PRK09588" /db_xref="CDD:181972" gene complement(6161067..6161867) /locus_tag="PA5472" /db_xref="GeneID:877633" CDS complement(6161067..6161867) /locus_tag="PA5472" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254159.1" /db_xref="GeneID:877633" /translation="MRMRFSGISGCLSAAVLALGVGGAPVVQADALGDSLEQAHIRKA TFAAPAWEGYTNADGSGLYWDLLKQVYAPYGLDVKFINMPWNRANKLMTAGSMVDGVP GEIPGVEGKLYAQLPIDIEYHGVMHAAKTPFSGRASLTGKRVGWRHSYNLIPAEQRDF TLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHLPADAYPIAQLPPGKESFMT FADSASGRLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ" misc_feature complement(6161103..6161711) /locus_tag="PA5472" /note="ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Amino acid transport and metabolism, Signal transduction mechanisms]; Region: HisJ; COG0834" /db_xref="CDD:440596" gene 6162221..6163969 /locus_tag="PA5473" /db_xref="GeneID:880370" CDS 6162221..6163969 /locus_tag="PA5473" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254160.1" /db_xref="GeneID:880370" /translation="MLKLLDLLSAVALLVWGTHIVRTGILRVYGADLRRILSRSVEKR PLAFAAGIGVTALVQSSNATALLATSFVAQGLMALAPALAIMLGADVGTALMARVLTL DLSWLSPLLIFFGVIFFLSRKQTRLGQLGRVFIGLGLIILALQLIVAAAEPMTQAKGV KVLFSSLTGDIMLDALTGALFAMISYSSLAAVLLTATLAASKVISLKVALCLVVGANL GSGILAMLSATAQNAAGRRVALGSLLFKVAGCLLVLPLVGPLADWMDHWQFSTAELVI AFHVLYNAARCLACLPLTNAMASFCTRVMPDRALPDDVARPRHLDPAALDTPSLALAN AVRETLRMGDTVEQMLNNLMQIIRGGDPLLGKDIRKLDDDVDALYTAIKLYLARMPRE DLSERDSRRWAEIIELAINLEQAGDIIEHMLAAVQDKKTSRSRSFSDTGLEEIGTLYQ QLVSNLRLGLSVFLNGDLDSAKRLRRAKQRFRLQERRYAHAHVDRLHQQVVQSIETSS LHLDLISDMKRLNSLFCAIAYAVLDNPDAPSSAADEGTRRDEDDWADEVDDMTSAPLA EPALAEERAETRRSRH" misc_feature 6162221..6163819 /locus_tag="PA5473" /note="Na+/phosphate symporter [Inorganic ion transport and metabolism]; Region: NptA; COG1283" /db_xref="CDD:440894" gene 6164038..6165411 /locus_tag="PA5474" /db_xref="GeneID:880371" CDS 6164038..6165411 /locus_tag="PA5474" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="metalloprotease" /protein_id="NP_254161.1" /db_xref="GeneID:880371" /translation="MRSLSTLLLFCLLCPWSYADQRSEVEAFQLENGMGVLLKPTEQH RHVSIRLVVGVGFADFSCREKQLPHLLEHLFFSGLDGGDEADLEARMQALGGQWNAYT SEGDTTFVIEAPAATQRQVLDLLLDTITRTELDEPRIAAAKRVIEREGGGHYSHLQRW LDRENLGRGAMDQLAVELGLACSQRAPLAPLGAEQLERLRSDWYVPGNMTLILVGDLD PRLPAYLTRTFGTLEDHELPERRELPAANGHAEARRTLITRPFGEGAMLHWIYPEPDD AAPDAMVLLQAYMNDALYADLRVRRGLTYGPSTDRQVFANQGFFSLDADVERSDLPAT EAALRELLDGIRQHGLDPGRFKRVQFAERARLAWSTQGNAALADYYWGSLADYEDGHF PNEERRLAKVSLQQANALAKRLFDGEGYLRIEKPLFDDDMLYPLLLAAGLLASGLLWF GLRRRRA" misc_feature 6164107..6165291 /locus_tag="PA5474" /note="Predicted Zn-dependent peptidase, M16 family [General function prediction only]; Region: PqqL; COG0612" /db_xref="CDD:440377" gene complement(6165417..6165977) /locus_tag="PA5475" /db_xref="GeneID:878199" CDS complement(6165417..6165977) /locus_tag="PA5475" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254162.1" /db_xref="GeneID:878199" /translation="MSNVQNASRSSAFAAVEGDHWVESLDDGRHVLIRPLREEDRERE RQFINRLSPATRHFRFLGEIKEASPALLDQLMDIDYQQSMAFVALVHEDGELREVGIS RYAACCEEGQCECAVTIADDYQGLGLDAVLMRHLIDVARRNGFRQMYSVDSAANRAMR DLCCALGFVGQRDPDDSTQVIHRLAL" misc_feature complement(6165471..6165791) /locus_tag="PA5475" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" gene complement(6166120..6167409) /gene="citA" /locus_tag="PA5476" /db_xref="GeneID:878200" CDS complement(6166120..6167409) /gene="citA" /locus_tag="PA5476" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="citrate transporter" /protein_id="NP_254163.1" /db_xref="GeneID:878200" /translation="MASNKSKGVAIFRVVSGNFLEMYDFMVYGFYATAIAKTFFPGDN PFASLMLSLATFGAGFLMRPLGAVFLGAYIDRHGRRQGLIITLGLMAMGTLLIAFVPG YATLGVAAPLLVLFGRLLQGFSAGVELGGVSVYLSEIATPGRKGFFVSWQSASQQVAV VFAGLLGVLLNQWLSPQDMGEWGWRVPFFIGCLIVPALFVIRRSLEETPEFEARTHRP SLSQVLRSIGQNFGVVLAGTAMVVMTTVSFYLITAYTPTFGKNELQLSDLDSLLVTMC IGLSNFIWLPVMGAFSDRIGRKPLLLGASALALLTAYPALSWLVREPSFAGLLGVELW LSFLYSSYNGAMVVALTEVMPADVRTTGFSLAYSLATATFGGFTPAVCTWLIHTLDNR AAPGIWLSGAALLGLLATLVLFRRRGKEIAEAELANA" misc_feature complement(6166129..6167409) /gene="citA" /locus_tag="PA5476" /note="tricarballylate/proton symporter TcuC; Region: PRK15075" /db_xref="CDD:237902" gene 6167783..6168823 /locus_tag="PA5477" /db_xref="GeneID:877682" CDS 6167783..6168823 /locus_tag="PA5477" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254164.1" /db_xref="GeneID:877682" /translation="MPNQQRPVLKARLEQLIALVGGLMARYPRTIALFGFCSGVFSFI MVDRQKGFAQVLAIIMLVSWVWLILENLLRETFARRFGWEIPAPLLRYATQLIHQESL FFVLPFFLITTTWNSGQALFTGTLAAAALISITDPLYYRWLSRRRWVFLAYHTLTLFA VLLTSLPILLHLTTPESYRLSLGIAVVLSFPSLLVTFPLQHWWRGFLLLGLTLAVGLA GWFGRTWVPPATLWLTEVAVSSQFDDQSRTPGDSLEQVGAAQLRSQGLFAYTAINAPR GLDERIYHVWMFNGKEFDRIALDIHGGRKEGYRAWTHKQNFPGDPVGHWQVKVLTEAG QMIGTLRFDVTQ" misc_feature 6167801..6168586 /locus_tag="PA5477" /note="Family of unknown function (DUF5924); Region: DUF5924; pfam19346" /db_xref="CDD:437178" misc_feature 6168617..6168808 /locus_tag="PA5477" /note="Protein of unknown function (DUF2914); Region: DUF2914; pfam11141" /db_xref="CDD:431676" gene complement(6168842..6170071) /locus_tag="PA5478" /db_xref="GeneID:877683" CDS complement(6168842..6170071) /locus_tag="PA5478" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254165.1" /db_xref="GeneID:877683" /translation="MLNGLWLGFFLVAAASALARWLIGGDATVFAAMVESLFAMAKLA VEVMVLLFGTLTLWLGFLRIAEKAGLVERLAVLLGPLFRRLMPEVPPGHPAIGLITLN FAANGLGLDNAATPIGLKAMKALQELNPSSTTASNAQILFLVLNASSLTLLPVTIFMY RAQQGAADPTLVFLPILLATSASTLAGLLSVALMQRLRLWDPVVLAYLIPGALLLAGF MAVLGTLSATALAQLSSLLGNLTLFSLIVLFLIVGALKKVPVYESFVEGAKEGFDVAR NLLPYLVAMLCAVGVLRASGALEVVLGGIRWAVEGLGWDSRFVEALPTALVKPFSGSA ARAMLLETMQTHGVDSFPALVAATVQGSTETTFYVLAVYFGSVGLQRARHAVGCALTA DLAGVIASIAVCYWFFA" misc_feature complement(6169466..6170071) /locus_tag="PA5478" /note="Spore maturation protein SpmA (function unknown) [General function prediction only]; Region: SpmA; COG2715" /db_xref="CDD:442028" misc_feature complement(6168845..6169369) /locus_tag="PA5478" /note="Spore maturation protein SpmB (function unknown) [Function unknown]; Region: SpmB; COG0700" /db_xref="CDD:440464" gene complement(6170176..6171510) /gene="gltP" /locus_tag="PA5479" /db_xref="GeneID:877684" CDS complement(6170176..6171510) /gene="gltP" /locus_tag="PA5479" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glutamate/aspartate:proton symporter" /protein_id="NP_254166.1" /db_xref="GeneID:877684" /translation="MGKAKLSLAWQIVIGLALGIAVGAVLNHFSAEKAWWIANVLQPA GDIFIRLIKMIVVPIVISSLVVGIAGVGDAKKLGRIGLKTIIYFEIVTTVAIVVGLLL ANLFQPGTGIDMSTLGTVDISQYQKTTQEVQHDHAFIATILNLIPSNVFAAIARGEML PIIFFSVMFGLGLSSLPNDLREPLVKVFQGVSETMFKVTHMIMKYAPIGVFALIAVTV ANFGFASLLPLAKLVILVYVAIVFFALVVLGLIARMFGFSIMRLIRIFKDDLVLAYST ASSETVLPRIIEKMEAYGAPKAISSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDL SIGQQIMLVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRIMDMAR TALNVIGNALAVLVISKWEGMYDAAKGQRYWDSLPHLRQAVGEAKGKQATLE" misc_feature complement(6170203..6171510) /gene="gltP" /locus_tag="PA5479" /note="glutamate/aspartate:proton symporter; Provisional; Region: gltP; PRK11283" /db_xref="CDD:183075" gene complement(6172223..6172690) /locus_tag="PA5481" /db_xref="GeneID:878530" CDS complement(6172223..6172690) /locus_tag="PA5481" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254168.1" /db_xref="GeneID:878530" /translation="MRLMRNLMNALLLGAAASSLAVAADRDGEYRLNELQSTDAGYRK AWQNLVEDESRLPDWVMNLSGTATPMHAVDDQGDKYLVGGLCEKSDCKGQRLLVAFDW DKSHAYGLYVQVPEGLPQDKSPSKHASFRWLGKPEPAVQKILDEQLKADPNWY" misc_feature complement(6172232..6172582) /locus_tag="PA5481" /note="Inhibitor of vertebrate lysozyme (Ivy); Region: Ivy; pfam08816" /db_xref="CDD:430234" gene complement(6172712..6172873) /locus_tag="PA5482" /db_xref="GeneID:877695" CDS complement(6172712..6172873) /locus_tag="PA5482" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254169.1" /db_xref="GeneID:877695" /translation="MLSWAITFLIIAIIAAVLGFGGIAGAATGIAKILFVLFLVLFVV SFFFGRRRG" misc_feature complement(6172715..6172873) /locus_tag="PA5482" /note="Uncharacterized membrane protein YtjA, UPF0391 family [Function unknown]; Region: YtjA; COG5487" /db_xref="CDD:444238" gene 6173348..6174697 /gene="algB" /locus_tag="PA5483" /db_xref="GeneID:877696" CDS 6173348..6174697 /gene="algB" /locus_tag="PA5483" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="two-component response regulator AlgB" /protein_id="NP_254170.1" /db_xref="GeneID:877696" /translation="METTSEKQGRILLVDDESAILRTFRYCLEDEGYSVATASSAPQA EALLQRQVFDLCFLDLRLGEDNGLDVLAQMRVQAPWMRVVIVTAHSAVDTAVDAMQAG AVDYLVKPCSPDQLRLAAAKQLEVRQLTARLEALEDEVRRQGDGLESHSPAMAAVLET ARQVAATDANILILGESGSGKGELARAIHTWSKRAKKPQVTINCPSLTAELMESELFG HSRGAFTGATESTLGRVSQADGGTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVT RRADVRILAATNRDLGAMVAQGQFREDLLYRLNVIVLNLPPLRERAEDILGLAERFLA RFVKDYGRPARGFSEAAREAMRQYPWPGNVRELRNVIERASIICNQELVDVDHLGFSA AQSASSAPRIGESLSLEDLEKAHITAVMASSATLDQAAKTLGIDASTLYRKRKQYGL" misc_feature 6173366..6174691 /gene="algB" /locus_tag="PA5483" /note="DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]; Region: AtoC; COG2204" /db_xref="CDD:441806" gene 6174694..6176481 /locus_tag="PA5484" /db_xref="GeneID:880850" CDS 6174694..6176481 /locus_tag="PA5484" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="two-component sensor" /protein_id="NP_254171.1" /db_xref="GeneID:880850" /translation="MSMPLPMKLRTRLFLSISALITVSLFGLLLGLFSVMQLGRAQEQ RMSHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSA EQAALDGVRDAYLQLQAHTPALLEAPMADNDGFSEAFNGLRLRLQDLQQLALAGISEA ETSARHRAYLVAGLLGLVGVAILLIGFVTAHSIARRFGAPIETLARAADRIGEGDFDV TLPMTNVAEVGQLTRRFGLMAEALRQYRKTSVEEVLSGERRLQAVLDSIDDGLVIFDN QGRIEHANPVAIRQLFVSNDPHGKRIDEILSDVDVQEAVEKALLGEVQDEAMPDLVVD VAGESRLLAWSLYPVTHPGGHSVGAVLVVRDVTEQRAFERVRSEFVLRASHELRTPVT GMQMAFSLLRERLDFPAESREADLIQTVDEEMSRLVLLINDLLNFSRYQTGMQKLELA SCDLVDLLTQAQQRFIPKGEARRVSLQLELGDELPRLQLDRLQIERVIDNLLENALRH SSEGGQIHLQARRQGDRVLIAVEDNGEGIPFSQQGRIFEPFVQVGRKKGGAGLGLALC KEIIQLHGGRIAVRSQPGQGARFYMLLPV" misc_feature 6174817..6175173 /locus_tag="PA5484" /note="Sensor domain of alginate biosynthesis sensor protein KinB; Region: KinB_sensor; pfam16767" /db_xref="CDD:435571" misc_feature 6175201..6176478 /locus_tag="PA5484" /note="Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms]; Region: NtrY; COG5000" /db_xref="CDD:444024" gene complement(6176516..6177295) /gene="ampDh2" /locus_tag="PA5485" /db_xref="GeneID:880851" CDS complement(6176516..6177295) /gene="ampDh2" /locus_tag="PA5485" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="protein AmpDh2" /protein_id="NP_254172.1" /db_xref="GeneID:880851" /translation="MRSFVLLAFTLSLLAGCSSGPRLNTDYTSANQDSRVQFIVLHYT STDLPHSLGILTHGGVSAHYLIGDDEPATVYRLVDENRRAWHAGVSEWQGRTWLNATS IGIEIVNQGYRDTPQGRVWYPFSEAQIQALIPLLKDIAKRHGITPDRIIGHSDIAPGR KVDPGPLFPWKRLADAGLVPWPKPGELARRLAELNGQLPDVRWFQQQLARHGYLVPQT GELEKDTRDVIGAFQMKYRPARFDGEPDLETAALLLAVPTS" misc_feature complement(6176768..6177217) /gene="ampDh2" /locus_tag="PA5485" /note="N-acetyl-anhydromuramyl-L-alanine amidase AmpD [Cell wall/membrane/envelope biogenesis]; Region: AmpD; COG3023" /db_xref="CDD:442259" misc_feature complement(6176537..6176701) /gene="ampDh2" /locus_tag="PA5485" /note="Putative peptidoglycan binding domain; Region: PG_binding_1; pfam01471" /db_xref="CDD:460223" gene complement(6177325..6177918) /locus_tag="PA5486" /db_xref="GeneID:880852" CDS complement(6177325..6177918) /locus_tag="PA5486" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254173.1" /db_xref="GeneID:880852" /translation="MDMFGVAVLIFLVTDPFGNIAVFLAALKGVAPGRRLRVAFRELA FALGLLLLFLTLGEHILSGLGLSREATGIAGGIILFVIAMRLIFPSPQGLLGEVPDGE PLLVPLATPAVAGPSALAMLITLRTTFDGPLWELYLAVVLAWAATALILLQAAFLQRF LGPRGLTAIERLAGMLLIMLSVDMLLDNLRSVLHIAA" misc_feature complement(6177334..6177915) /locus_tag="PA5486" /note="Cytochrome C biogenesis protein transmembrane region; Region: DsbD; cl21514" /db_xref="CDD:473893" gene complement(6178036..6180051) /locus_tag="PA5487" /db_xref="GeneID:877705" CDS complement(6178036..6180051) /locus_tag="PA5487" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254174.1" /db_xref="GeneID:877705" /translation="MSRDDVQRWKDKYLENIEQQERLQRRWDARIDLLRRGLVRSSLA AEGSDKAVDQCMKELREILRRDDMDAGLSGLIPRLEKAVLDSEQRRQQRTQQNIDALG ELAQQLLALDLPRELRKPLKQFARDIEERARQSREIPILLSELSRLQRQALAERKGGD AEDGRPSLLQRLFGGKESETTAEPSASVPSVVAASNTPIQPAAAAPSLPVAEHDEAPG GPPQPLPARTVAAIESAPAGWVGVAERGEPNQILLDEPREIWLDSLPLPAGLSFSETL EEAGAEPSPAMPADVESAPEAPATPVDNLDGQAVDEAYELPPPIPEPGYSAVAPHIEA SLLRLLDGLSLPSSHQPQAEALRERIDGSLNWYELVPVLDDLAVLVLSLADSGQRDFE EYLRQLNERLESFLGHLGDAHAGYTDVLDNARGFDQSLREQVSGLQASVQQATDLNSL KLAVDSRLNGLLASMDEHQREQAEHEQEVSGRLQALMERVNSMEQDAKAFHSHLEDQR QKALTDPLTGLPNRAALSERLEQEVARRHRDGGDLLLAVLDIDHFKRINDDFGHLAGD KVLKIIAGELRKRLRQADFIARFGGEEFVVLLPATSLEAGRQLLERLRAAIAACPFHF KGEPLSITCSAGITAFEGNEAGEAVFERADQALYRAKRAGRDRLEVA" misc_feature complement(<6179113..>6179571) /locus_tag="PA5487" /note="DNA polymerase III subunits gamma and tau; Validated; Region: PRK07764" /db_xref="CDD:236090" misc_feature complement(6178039..6178830) /locus_tag="PA5487" /note="GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants [Signal transduction mechanisms]; Region: GGDEF; COG2199" /db_xref="CDD:441801" gene complement(6180048..6180926) /locus_tag="PA5488" /db_xref="GeneID:877706" CDS complement(6180048..6180926) /locus_tag="PA5488" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254175.1" /db_xref="GeneID:877706" /translation="MLRRWQREPRVAGSCDPRVNPSCDDSRELPDDGRLRLLSFNIQV GISTERYRHYLTRGWQHLLPHAGRATNLKRIGELLADYDLVALQEADGGSLRSGYVNQ VEHLAQLGAFPYWYQQLNRNLGRIAQHSNGLLSRWRPTLLEDHPLPGPPGRGAIFVRF GEGADALVVVMMHLALGARTRTRQLAYIRELIGDYRHQVLMGDMNTHAVDLLENSPLR DLGLMAPQVEATFPSWRPQRNLDHILLSSDLALERVDVLDQPISDHLPVSVEIRLPDN LRDKALVVRGDAGSPP" misc_feature complement(6180105..6180839) /locus_tag="PA5488" /note="Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family [General function prediction only]; Region: ElsH; COG3568" /db_xref="CDD:442789" gene complement(6180942..6181577) /gene="dsbA" /locus_tag="PA5489" /db_xref="GeneID:877731" CDS complement(6180942..6181577) /gene="dsbA" /locus_tag="PA5489" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="thiol:disulfide interchange protein DsbA" /protein_id="NP_254176.1" /db_xref="GeneID:877731" /translation="MRNLILTAMLAMASLFGMAAQADDYTAGKEYVELSSPVPVSQPG KIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQMFLTLES MGVEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKA KKLAMAYQVTGVPTMVVNGKYRFDIGSAGGPEETLKLADYLIEKERAAAKK" misc_feature complement(6180957..6181499) /gene="dsbA" /locus_tag="PA5489" /note="DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold. It is involved in the oxidative protein folding pathway in prokaryotes, and is the strongest thiol...; Region: DsbA_DsbA; cd03019" /db_xref="CDD:239317" misc_feature complement(order(6181059..6181061,6181401..6181406, 6181410..6181412)) /gene="dsbA" /locus_tag="PA5489" /note="catalytic residues [active]" /db_xref="CDD:239317" misc_feature complement(6181314..6181322) /gene="dsbA" /locus_tag="PA5489" /note="hinge region; other site" /db_xref="CDD:239317" misc_feature complement(order(6181125..6181154,6181170..6181196, 6181206..6181265,6181278..6181301)) /gene="dsbA" /locus_tag="PA5489" /note="alpha helical domain; other site" /db_xref="CDD:239317" gene complement(6181745..6182350) /gene="cc4" /locus_tag="PA5490" /db_xref="GeneID:877732" CDS complement(6181745..6182350) /gene="cc4" /locus_tag="PA5490" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="cytochrome C4" /protein_id="NP_254177.1" /db_xref="GeneID:877732" /translation="MNKLLVSLLLTLGLTGLAHAAGDAAAGQAKAAVCGACHGADGNS PAPNFPKLAGQGERYLLKQMHDIKDGKRTVLEMTGLLTNLSDQDLADIAAYFASQKMS VGMADPNLVAQGEALFRGGKIAEGMPACTGCHSPSGVGIATAGFPHLGGQHATYVAKQ LTDFREGTRTNDGDTKIMQSIAAKLSNKDIAAISSYIQGLH" misc_feature complement(6182033..>6182254) /gene="cc4" /locus_tag="PA5490" /note="Cytochrome c553 [Energy production and conversion]; Region: CytC553; COG2863" /db_xref="CDD:442110" misc_feature complement(6181748..6181981) /gene="cc4" /locus_tag="PA5490" /note="Cytochrome c553 [Energy production and conversion]; Region: CytC553; COG2863" /db_xref="CDD:442110" gene complement(6182396..6182689) /locus_tag="PA5491" /db_xref="GeneID:877792" CDS complement(6182396..6182689) /locus_tag="PA5491" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="cytochrome" /protein_id="NP_254178.1" /db_xref="GeneID:877792" /translation="MKKLLLAATVVAVAVTAQAAQDPEAVFNRTCGACHDGQLPMAPK KGDHAAWEPRLAKGMPTLVQHVTNGFNAMPPRGLCTDCSAEDYQATIQWMVKK" misc_feature complement(6182402..>6182626) /locus_tag="PA5491" /note="Cytochrome c5 [Energy production and conversion]; Region: CytC5; COG3245" /db_xref="CDD:442476" gene 6182873..6183520 /locus_tag="PA5492" /db_xref="GeneID:877793" CDS 6182873..6183520 /locus_tag="PA5492" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="ribosome biogenesis GTP-binding protein YsxC" /protein_id="NP_254179.1" /db_xref="GeneID:877793" /translation="MSEKNPIVGLCQKASFLISAAQVDQCPPDEGLEVAFAGRSNAGK SSALNTLTHANLARTSKTPGRTQLLNFFALDDSRRLVDLPGYGYAKVPIPLKQHWQRH LEAYLSSRASLAGVFLMMDIRHPLTDFDRLMLDWAQASQLPIHVLMTKADKLAFGAAK NALLKVRREVQQGWGDVATLQLFSAPKRQGVDEAQMVLAQWLGLLDEEQEAFEEA" misc_feature 6182906..6183478 /locus_tag="PA5492" /note="GTP-binding protein EngB required for normal cell division [Cell cycle control, cell division, chromosome partitioning]; Region: EngB; COG0218" /db_xref="CDD:439988" gene complement(6183784..6186525) /gene="polA" /locus_tag="PA5493" /db_xref="GeneID:877794" CDS complement(6183784..6186525) /gene="polA" /locus_tag="PA5493" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="DNA polymerase I" /protein_id="NP_254180.1" /db_xref="GeneID:877794" /translation="MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLL SLRKQYPDSPFAVVFDAKGPTFRDELFAEYKANRPSMPDDLRVQVEPLHASVRALGLP LLCVEGVEADDVIGTLARSSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSRLDVD GVKEKFGVGPELIIDFLALMGDKVDNIPGVPGVGEKTALGLLTGVGGGLEVLYASLDK VPELPIRGAKGLPAKLEENREQAFLSYQLATIKTDVELDVEIDKLYPGEPQREALIAL YRELEFKNWLDDLLREAKEAGENGEAETPIQAEVDYDVVLDQAGFDAWLKKLEEAELI AFDTETTSIDAQQAQVVGVSFAVKEGEAAYVPLAHSYMGVPEQLDRDAVLRALKPLLE DPKKLKVGQHAKYDINVLANASTPIALRGVAYDTMLESYVLDSTATRHDMDSLALKYL GHSTIRFEDIAGKGAKQLTFDQIAIEQAGPYAAEDADVTLRLHQALWQKLEAIPSLAR VLTDIEMPLVPVLARIERNGALVDANLLGIQSRELGEKMVALERQAYDLAGQEFNLGS PKQLGAILYDKLGLPVLSKTATGQPSTAEAVLAELAEQDFELPKVIMQYRSMSKLKST YTDRLPEQINPRTGRIHTSYHQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPQ GYKLLAADYSQIELRIMAHLAKDDGLLDAFRHDLDVHRATAAEVFGVPLEDVSGDQRR SAKAINFGLIYGMSAFGLAKQIGVERKEAQAYIDRYFARYPGVLAYMERTRAQAAEQG FVETLFGRRLYLPEIHSKNGAMRKAAERTAINAPMQGTAADIMKRAMVAVDNWLQESG LDARVILQVHDELVLEVREDLVEQVCEGIRPLMSGAATLDVPLVVEAGVGSNWDEAH" misc_feature complement(6183787..6186513) /gene="polA" /locus_tag="PA5493" /note="DNA polymerase I; Provisional; Region: PRK05755" /db_xref="CDD:235591" protein_bind 6184399..6184411 /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene 6186603..6186893 /locus_tag="PA5494" /db_xref="GeneID:877824" CDS 6186603..6186893 /locus_tag="PA5494" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254181.1" /db_xref="GeneID:877824" /translation="MRTLNRLMLAGLLAFAPLVAMAADDDAPSGEPDVTIRQEGDKTI QEYRVNGFLYAIKVVPKHGKPYFLVRADGSDGNFIRSDQPDKLIPQWEIFSW" misc_feature 6186651..6186890 /locus_tag="PA5494" /note="Protein of unknown function (DUF2782); Region: DUF2782; pfam11191" /db_xref="CDD:431714" gene 6186927..6187877 /gene="thrB" /locus_tag="PA5495" /db_xref="GeneID:877825" CDS 6186927..6187877 /gene="thrB" /locus_tag="PA5495" /EC_number="2.7.1.39" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="homoserine kinase" /protein_id="NP_254182.1" /db_xref="GeneID:877825" /translation="MSVFTPLERSTLEAFLAPYDLGRLRDFRGIAEGSENSNFFVSLE HGEFVLTLVERGPVQDLPFFIELLDVLHEDGLPVPYALRTRDGEALRRLEGKPALLQP RLAGRHERQPNAHHCQEVGDLLGHLHAATRGRILERPSDRGLPWMLEQGANLAPRLPE QARALLAPALAEIAALDAERPALPRANLHADLFRDNVLFDGPHLAGLIDFYNACSGWM LYDLAITLNDWCSNTDGSLDPARARALLAAYANRRPFTALEAEHWPSMLRVACVRFWL SRLIAAEAFAGQDVLIHDPAEFEIRLAQRQNVEIHLPFAL" misc_feature 6186927..6187874 /gene="thrB" /locus_tag="PA5495" /note="homoserine kinase; Provisional; Region: PRK05231" /db_xref="CDD:235369" misc_feature order(6187014..6187016,6187023..6187031,6187038..6187040, 6187071..6187073,6187077..6187079,6187161..6187163, 6187227..6187238,6187497..6187499,6187503..6187505, 6187509..6187514,6187518..6187520,6187548..6187553, 6187560..6187562,6187605..6187610,6187617..6187619) /gene="thrB" /locus_tag="PA5495" /note="putative active site [active]" /db_xref="CDD:270702" misc_feature order(6187014..6187016,6187026..6187028,6187038..6187040, 6187071..6187073,6187077..6187079,6187161..6187163, 6187227..6187238,6187497..6187499,6187509..6187514, 6187518..6187520,6187548..6187553) /gene="thrB" /locus_tag="PA5495" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270702" misc_feature order(6187023..6187031,6187497..6187499,6187503..6187505, 6187512..6187514,6187551..6187553,6187560..6187562, 6187605..6187610,6187617..6187619) /gene="thrB" /locus_tag="PA5495" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:270702" gene complement(6188166..6188855) /gene="nrdJb" /locus_tag="PA5496" /db_xref="GeneID:877839" CDS complement(6188166..6188855) /gene="nrdJb" /locus_tag="PA5496" /note="'class II (cobalamin-dependent) ribonucleotide-diphosphate reductase subunit, NrdJb'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254183.1" /db_xref="GeneID:877839" /translation="MSAVKITQKIKGFKVVNEAEEQALAAAAEAASVVQMDETLERPD TLIGATYKIKSPLFEHALYVTINDMVLNAGTAHEQRRPFEIFINSKNMDHFQWIVALT RIMSAVFRKGGDCTFLVEELKAVFDPRGGYLKKGGIYMPSIVAEIGGVLERHLTAIGL LRGPELDEEQRLFLAEKRAAYEAAQGTSKVEPGEGFPAGAQLCGKCNSMAVVQMDGCA TCLNCGHSKCG" misc_feature complement(6188169..>6188735) /gene="nrdJb" /locus_tag="PA5496" /note="vitamin B12-dependent ribonucleotide reductase; Region: PRK08665" /db_xref="CDD:236330" gene complement(6188872..6191076) /gene="nrdJa" /locus_tag="PA5497" /db_xref="GeneID:877840" CDS complement(6188872..6191076) /gene="nrdJa" /locus_tag="PA5497" /note="'class II (cobalamin-dependent) ribonucleotide-diphosphate reductase subunit, NrdJa'" /codon_start=1 /transl_table=11 /product="ribonucleoside-diphosphate reductase" /protein_id="NP_254184.1" /db_xref="GeneID:877840" /translation="MLRTVAGFGRPNNHREVNQRMAKTDARSPRTERGTIALQDASQD IWDKKYRLKSKDGTPVDASVDGTWQRVARALADVEDKASREHWYGRFLWALRNGAIPA GRIISNAGALGHKPATSTINCTVSGTIQDSMDNILEKVHEAGLTLKAGCGIGYEFSTL RPRGAYVSGAGAYTSGPLSFMDIYDKMCFTVSSAGGRRGAQMGTFDVSHPDVREFIRA KREDGRLRQFNLSLLITDQFMQAVEQDADWPLVFPVHVKERDEIDLDDPNAVVWREWP IQDDYVQRADGLVACKVYGQVRARHLWDMIMVSTYDYAEPGFILIDRVNELNNNWWCE AIRATNPCGEQPLPPYGSCLLGSVNLTCFVEQPFGDEARFDWDRFREVVRVFTRMLDN VVEINGLPLEQQRQEILGKRRHGMGFLGLGSTLTLLKLRYGSPEACVFTEEVAREMAL VGWEVALELAREKGPAPILAQDYEVTAEMLRKRPEMAADGYKAGDRIRGSVLHAKYSR YMQRVAEHAPELIEALAETGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYSRN LIREGRKTKEKVEVYSYELLAYRTLVNAQALPDSDDPARRLPDYFITADSVTPAQHMD IQAAAQKWVDSSISKTANVPTDYPFEDFKDIYRYAWHQGLKGCTTFRFNPEAFQGVLV KESDLEKTRYRFELEDGSVVEFKGNEQVEYDGEIHTAANLFDALKEGYYGKY" misc_feature complement(6189037..6190944) /gene="nrdJa" /locus_tag="PA5497" /note="ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Region: NrdJ_Z; TIGR02504" /db_xref="CDD:274168" gene complement(6191186..6192109) /locus_tag="PA5498" /db_xref="GeneID:878912" CDS complement(6191186..6192109) /locus_tag="PA5498" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="adhesin" /protein_id="NP_254185.1" /db_xref="GeneID:878912" /translation="MTLRPFALLSTCFALFLLASPARAEVSVLTSIKPLQLVAAAIQD GVGQPDVLLPPGASPHQYALRPSDVRRLREVQLFYWIGPDLENFLPKVLAGRQGTSVA VQDLPGMHLRKFVNFEEEEHAGHDEHDHDHRPGMLDAHLWLLPANARTIAARMAEDLA QVDPANAGRYRANLKAFDERLGGLDGKLRERLGKLAGKPFFVFHEAFDYFEEAYGLRH TGVFAVSAEVQPGARHVAAMRAQLKAAGPACIFSEPPLRPRLADTLSEGLPVRLAELD DLGVNVSVDANGYENLLNNLAGEFAGCLEKL" misc_feature complement(6191198..6192058) /locus_tag="PA5498" /note="ABC-type Zn2+ transport system, periplasmic component/surface adhesin ZnuA [Inorganic ion transport and metabolism]; Region: ZnuA; COG4531" /db_xref="CDD:443599" gene 6192179..6192682 /gene="np20" /locus_tag="PA5499" /db_xref="GeneID:878913" CDS 6192179..6192682 /gene="np20" /locus_tag="PA5499" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_254186.1" /db_xref="GeneID:878913" /translation="MYKIAPKTPLACQPHDHSQCVSTALAEADALCARQGVRLTELRR RVLELVWQSHKPLGAYDILAVLSETDGRRAAPPTVYRALDFLQENGLVHRIASLNAFV GCNNPEHSHQGQFLICRTCHTAIELEQPDISRAIVAGANSVGFAVESQTVEVVGLCGT CRDQKDA" misc_feature 6192245..6192667 /gene="np20" /locus_tag="PA5499" /note="Fe2+ or Zn2+ uptake regulation protein Fur/Zur [Inorganic ion transport and metabolism]; Region: Fur; COG0735" /db_xref="CDD:440498" gene 6192682..6193491 /gene="znuC" /locus_tag="PA5500" /db_xref="GeneID:877853" CDS 6192682..6193491 /gene="znuC" /locus_tag="PA5500" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="zinc transporter ZnuC" /protein_id="NP_254187.1" /db_xref="GeneID:877853" /translation="MDNALVRLTQVGVSFNGQAVLSDVDLAIEPGQIVTLIGPNGAGK TTLVRSVLGLLKPHVGEVWRRPRLTIGYMPQKLHVDATLPLSVLRFLRLVPGVKREQA LAALREVGAAHVLERPLQSISGGELQRVLLARALLRKPELLVLDEPVQGVDVAGQAEL YRLIGKLRDRYGCGVLMVSHDLHLVMSATDQVVCLNRHVCCSGHPEQVSGDPAFVELF GQDARSLAIYHHHHDHAHDLHGEVVKAGPGALPPGTRFTPVHKHGPDCNHG" misc_feature 6192694..6193365 /gene="znuC" /locus_tag="PA5500" /note="high-affinity zinc transporter ATPase; Reviewed; Region: znuC; PRK09544" /db_xref="CDD:181939" gene 6193484..6194272 /gene="znuB" /locus_tag="PA5501" /db_xref="GeneID:877854" CDS 6193484..6194272 /gene="znuB" /locus_tag="PA5501" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="zinc ABC transporter permease" /protein_id="NP_254188.1" /db_xref="GeneID:877854" /translation="MADFLLNALLAGLALALVAGPLGSFVVWRRMAYFGDTLSHAALL GVALGFLLDVSPTLAVTVGCVLLAVLLVTLQQRQPLAADTLLGILAHSTLSLGLVTLS FMKEVRVDLMAYLFGDLLAVSASDLLWIIAGSALVLALICFLWRPLLAITVHEELAKV EGLPVGAIRLALMLLIAIVIAVAMKIVGVLLITSLLIIPAAAAQRHARSPEQMAVGAS LLGLVAVCAGLALSWFKDTPAGPSIVVSAAGLFLLSFVLPRRTV" misc_feature 6193541..6194251 /gene="znuB" /locus_tag="PA5501" /note="Transmembrane subunit (TM) of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which are involved in the uptake of branched-chain amino acids (AAs), as well as TMs of transporters involved in the uptake of...; Region: TM_PBP1_branched-chain-AA_like; cl00454" /db_xref="CDD:444914" misc_feature order(6193550..6193552,6193562..6193570,6193907..6193912, 6193916..6193924,6193928..6193933,6193937..6193954, 6193958..6193966,6194090..6194092,6194111..6194113) /gene="znuB" /locus_tag="PA5501" /note="ABC-ATPase subunit interface [active]" /db_xref="CDD:119348" misc_feature order(6193565..6193567,6193571..6193573,6193586..6193588, 6193727..6193729,6193733..6193738,6193745..6193750, 6193757..6193762,6193769..6193771,6193778..6193783, 6193787..6193789,6193817..6193822,6193829..6193831, 6194057..6194059,6194204..6194206,6194213..6194218, 6194225..6194227,6194234..6194239,6194246..6194248) /gene="znuB" /locus_tag="PA5501" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:119348" misc_feature order(6193787..6193789,6193859..6193861,6194033..6194035, 6194045..6194047,6194180..6194182,6194195..6194197) /gene="znuB" /locus_tag="PA5501" /note="putative PBP binding regions [active]" /db_xref="CDD:119348" gene 6194314..6195102 /locus_tag="PA5502" /db_xref="GeneID:877863" CDS 6194314..6195102 /locus_tag="PA5502" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254189.1" /db_xref="GeneID:877863" /translation="MSSFFRLLSVLAAALLVSACQGNASSQPTPVVAPQAQPADPYAE LQETLAAGKLEQAEQQWLALRSAAAGDERVEAFRRQLAEAYMQRGETALRQGDLNTAT SALGHARGLMPKAPALTAGLDGAINRAKVDPARAEQARRMQQAAQQQMQQIIQTPPDG ELKPLPGAPHLIDPQAASSAVPLPMLDGTGQGGLGAVLDAVAADVVAYRCRVHIEVRR DSDYPLVSDQLLARVKKLSPDFDLHLSHVVQADKPTRLILTPRN" misc_feature 6194314..6195099 /locus_tag="PA5502" /note="PA5502 family lipoprotein; Region: PA5502_lipo; NF041601" /db_xref="CDD:469485" gene 6195309..6196316 /locus_tag="PA5503" /db_xref="GeneID:877864" CDS 6195309..6196316 /locus_tag="PA5503" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_254190.1" /db_xref="GeneID:877864" /translation="MIEFHDVHKTYRVAGREIPALQPTRLNIQAGQIFGLIGHSGAGK STLLRLINRLEEPSGGRILVEGEDVTALDAEGLRRFRQRVGMIFQHFNLLSSKTVADN IAMPLRLAGGFSRAEVDARVSELLARVGLSDHARKYPAQLSGGQKQRVGIARALACRP SILLCDEATSALDPQTTASVLQLLAEINRELKLTIVLITHEMDVIRRVCDQVAVMDGG AIVEQGDVADVFLHPQHPTTRRFVFEAERVDEDERHDDFAHVPGLILRLTFRGEATYA PLLGTVARQTGVDYSILSGRIDRIKDTPYGQLTLALVGGDLEAAMSQLNAADVHVEVL R" misc_feature 6195309..6196313 /locus_tag="PA5503" /note="DL-methionine transporter ATP-binding subunit; Provisional; Region: metN; PRK11153" /db_xref="CDD:236863" gene 6196316..6196993 /locus_tag="PA5504" /db_xref="GeneID:877865" /db_xref="PseudoCap:PA5504" CDS 6196316..6196993 /locus_tag="PA5504" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa." /codon_start=1 /transl_table=11 /product="D-methionine ABC transporter" /protein_id="NP_254191.1" /db_xref="GeneID:877865" /db_xref="PseudoCap:PA5504" /translation="MDFFETMSFANIDWYEIWLASVDTFWMLGGSLLFTVVLGLPLGV LLFLTGPRQMFEQKAVYTLLSLVVNILRSLPFIILLIVMIPLTVLITGTSLGVAGAIP PLVVGATPFFARLVETALREVDKGIIEATQAMGASTRQIIWNALLPEARPGIIAAITV TAITLVSYTAMAGVVGAGGLGDLAIRFGYQRFQTDVMVVTVVMLLILVQILQTVGDKL VVHFSRK" misc_feature 6196355..6196990 /locus_tag="PA5504" /note="ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; Region: MetP; COG2011" /db_xref="CDD:441614" gene 6197070..6197852 /locus_tag="PA5505" /db_xref="GeneID:878152" CDS 6197070..6197852 /locus_tag="PA5505" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="TonB-dependent receptor" /protein_id="NP_254192.1" /db_xref="GeneID:878152" /translation="MKKLLAAFSAVAALGLTAAQAAESLTVAATPVPHAEILNVVKPL LAKEGVDLKIKEFTDYVQPNVQVSEKRLDANFFQHQPYLDEFNKAKGTDLVAVTGVHI EPLGAYSSKYKKLDELPSGATVVIPNDATNGGRALLLLDKAGVIKLKDNKSITATPKD IVDNPKNIKIRELEAATLPRVLTQVDMALINTNYALEAKLNPTKDALAIEGSDSPYVN ILVARPDNKDSDAMQKLAKALHSAEIKQFIQEKYKGAVVPAF" misc_feature 6197070..6197849 /locus_tag="PA5505" /note="ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]; Region: NlpA; COG1464" /db_xref="CDD:441073" gene 6198055..6198912 /locus_tag="PA5506" /db_xref="GeneID:878153" CDS 6198055..6198912 /locus_tag="PA5506" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254193.1" /db_xref="GeneID:878153" /translation="MQELKQRLASPPAELTPAERKVVRALLDDYPRLGLGPMTRLARH AGVSDPTIMRLVKKLGFAGYGDFQEALLADVDDRLRSPRTLLAERRERMGRDDTWARY LDQAGQSLQQTLGLTRPDDIQRLADWLLDSRLRVHCHGGRFSRFLAGYLVTHLRLLRP QCRLLDDGALLPDQLYDLGRQDLLVLFDYRRYQSQAQHVAQAAKARGTRLVLFTDIYA SPLREHADLIVSSPVESASPFDSLVPAMAQVEALVATLVARMGAPLDERLEGIDQLRN AFSSHILEE" misc_feature 6198055..6198888 /locus_tag="PA5506" /note="DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains [Transcription]; Region: RpiR; COG1737" /db_xref="CDD:441343" gene 6198917..6199570 /locus_tag="PA5507" /db_xref="GeneID:878660" CDS 6198917..6199570 /locus_tag="PA5507" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254194.1" /db_xref="GeneID:878660" /translation="MFSLPHHSPRDLPFGRRQTAILFVDMQRAWVEPGRDPHVDPQAA GYFYERVQNQVIPNQQRLLRAMRAVDENVLHTVIESLTADGRDRSLDHKLSEMHLPKG SPDARVIDALEPTANEIVLPKTSSGVFNSTAIDYVLRNLGTRHLIVCGVVTDQCVDMA VRDAADRGYLVTLVEDACATHTPERHQACLEAIKGYCWISDTETVLQRIAALGRSNL" misc_feature 6198974..6199498 /locus_tag="PA5507" /note="Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It...; Region: cysteine_hydrolases; cd00431" /db_xref="CDD:238245" misc_feature order(6198989..6198991,6199283..6199285,6199382..6199384) /locus_tag="PA5507" /note="catalytic triad [active]" /db_xref="CDD:238245" misc_feature 6199367..6199372 /locus_tag="PA5507" /note="conserved cis-peptide bond [active]" /db_xref="CDD:238245" gene 6199567..6200898 /locus_tag="PA5508" /db_xref="GeneID:878661" CDS 6199567..6200898 /locus_tag="PA5508" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutamine synthetase" /protein_id="NP_254195.1" /db_xref="GeneID:878661" /translation="MNRLQPVRLVSFVTTDLAGITRGRSLPLATLEEQLASGCGWVPA NSSLTPQDLIDESSPWGSHGDLRLLPDPNSRVRVEQGPDAAAPALDYLHGNLVETDGT PWPACPRSLLRAEVERYRDSGLQVIAAFEHEFSLLGLPGERPAAAFSLQAQRAAGQFP GWLVSALAQAGTEPEMFLPEYGQRQYEVTCRPAQGVAAADRAVNVREVTREVARQMGL RTCFAPLPAPGAVTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGVLAHLPA LCALTAPTAASYLRLKPHHWSAAYACLGLRNREAALRICPVVSVGGKPLGKQYNLEFR PMDATTCPHLAMAAVLIAGRLGIERRLPLRALADVDPHGLSDEERQARGIQALPATLG DALDCLQRDEALCAELPKPLLDTYLAMKRHELALTAGLSDDDLCRHYAELY" misc_feature 6199573..6199878 /locus_tag="PA5508" /note="Glutamine synthetase N-terminal domain; Region: Gln-synt_N_2; pfam16952" /db_xref="CDD:407170" misc_feature 6199882..6200880 /locus_tag="PA5508" /note="Glutamine synthetase, catalytic domain; Region: Gln-synt_C; pfam00120" /db_xref="CDD:425473" gene 6200966..6201634 /locus_tag="PA5509" /db_xref="GeneID:878662" CDS 6200966..6201634 /locus_tag="PA5509" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254196.1" /db_xref="GeneID:878662" /translation="MVLVCEHASRHIPLELQRLGLDQAAAEEHIAWDIGALALAEELS RRLDAPLLAAGYSRLLIDLNRPLEAPDSIPPHSEVYPVPGNRELSETVRRYRQDCLFH PFHQRLTQLLDERQAAGVPTRVVGVHSFTPVYHGRPRPLVAGVLYRNAGAYARRILDG LRRHGLEVAGNQPYAIDPAEDTTVPVHGDARGLEAVLLEIRNDGLRTPDAVYAWAERL YPWL" misc_feature 6200969..6201631 /locus_tag="PA5509" /note="Predicted N-formylglutamate amidohydrolase [Amino acid transport and metabolism]; Region: HutG2; COG3931" /db_xref="CDD:443132" gene 6201736..6203085 /locus_tag="PA5510" /db_xref="GeneID:878063" CDS 6201736..6203085 /locus_tag="PA5510" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_254197.1" /db_xref="GeneID:878063" /translation="MAIEQFGYRQQLRRSLSLSDLIIYGMIFMIPIAPFGVYGWVHAD AHGMVPMAYLVGMLAMLFTALSYGAMAKAFPIAGSVYSYAQRGIHPHVGFIAGWVLLL DYLLIPPLLYVFSALALNHLFPAIPKLAWMLLFLVSATLVNLRGITFAARANLLFLIG ELVVLAIFLVVGYQALEGGLGNGRLTLEPLYRPEAFDLGLVMKAASIAVLSFLGFDAI STLAEEVKGDPARQIGRAALIALFIMGGIFIAQTWLATDLAAGMNFKSADTAFYEIAE AAGGQWLSMLTAVATALAWGVTVSITSQAAVSRLLYSMARDGRLPRALARVHPRYQTP HVSLYLVAVLSLGIGWAFLDAPDVLTSLVNFGALTGFCLLHLSVINHYYRRQRSGQWL RHLLFPLVGLAIIAYVLYSMSLDAQLLGLAWIAVGLVYLALLQRGGRQAPTELAKDL" misc_feature 6201754..6203043 /locus_tag="PA5510" /note="Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; Region: PotE; COG0531" /db_xref="CDD:440297" gene complement(6203104..6204447) /gene="mifR" /locus_tag="PA5511" /db_xref="GeneID:878064" CDS complement(6203104..6204447) /gene="mifR" /locus_tag="PA5511" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator MifR" /protein_id="NP_254198.1" /db_xref="GeneID:878064" /translation="MSDQVIFVDDEATIREAVQQWLELSGFEVRLCLRAEECLGALDK SFAGVVISDVRMPGMDGLQLLANLQAVDRDLPVIMVTGHGDVPMAVEAMRQGAYDFIE KPFTPERLLGSLRRALEKRRLVLENRRLKEQASLKDQVDARLLGVSKPMEALRRQVLA LAPTPVNVLIRGETGSGKELVARCLHDFGPRADKPFVALNCAAIPEQLFESELFGHES GAFTGAQGKRIGKLEHAHGGTLFLDEIESMPLAQQVKLLRVLQEQQLERLGSNQSIHV DLRVIAATKPDLLAEARAGRFREDLVYRLNVAELRLPPIRERREDIPLLFEHFASVAS QRLGREPQPAAPAELARLMAHDWPGNVRELANAAERHVLGLERGDAEEGGGLTSGLAE RMEAFEAECLRQALGQCRGDIKAVMELLQLPRRTLNEKMLRHGLSRSDFVGEEPA" misc_feature complement(6203143..6204435) /gene="mifR" /locus_tag="PA5511" /note="DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]; Region: AtoC; COG2204" /db_xref="CDD:441806" gene complement(6204444..6206210) /gene="mifS" /locus_tag="PA5512" /db_xref="GeneID:877988" CDS complement(6204444..6206210) /gene="mifS" /locus_tag="PA5512" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="sensor histidine kinase MifS" /protein_id="NP_254199.1" /db_xref="GeneID:877988" /translation="MSLSRPLRLFLLLLPLLGGLLLSMDWAGRQARQQALRAEGEQVR KQLDLYAGSLQTLIERFRSLPAVLALDPDLRAALAGPIDGELQQRLNLKLESINLAAR SSTLELLDRTGLAVAASNWNLPTSYVGHNYGFRPYFRQTIAQGSGRFYAVGVISGIPG YFLSHAVRAEDGSFLGAIVVKLEFPDLERQWNQTPDLVLASDAKGIVFLANHAGWRYR ELEPLDTVDRFELAETRQYDRQPLTPLRHQTLRSYGEDRRLARVESADGEKDYLWQSL DLPNDGWTLHLLRDTASIQDDVATARLAAAGTWLALVFLGLFLHQRWRIARLRQRSRE ELERLVEQRTADLRTAQDGLVQAAKLAALGQMSAALAHEINQPLTAQRMQLASLRLLL DAGRHDEARQALPRIDQMLERMAALTGHLKTFARKSAGGLRERIELGHVVEQAQQLLL PRIRAERVEIEQALLWPAWVMGDAIRLEQVLVNLLRNALDAVAGQERPWIRLALQRLG GDWVLSVADNGGGIPAEHLGSVFDPFFTTKPVGEGLGLGLAVSYGIVHELGGRLQVAN AEAGAVFSLILPAAPDDTSVTT" misc_feature complement(6205671..6206072) /gene="mifS" /locus_tag="PA5512" /note="first PDC (PhoQ/DcuS/CitA) domain of diguanylate-cyclase and similar domains; Region: PDC1_DGC_like; cd12914" /db_xref="CDD:350339" misc_feature complement(6204471..6205532) /gene="mifS" /locus_tag="PA5512" /note="Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]; Region: COG4191" /db_xref="CDD:443345" gene 6206292..6207170 /gene="poxA" /locus_tag="PA5513" /db_xref="GeneID:877989" CDS 6206292..6207170 /gene="poxA" /locus_tag="PA5513" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254200.1" /db_xref="GeneID:877989" /translation="MSLSPWFHSCSAGFTLRGWRSEPSGKPLLHFLHGNGFCGRTYEP MLRLLAEDFDLWLCDIQGHGESDHGGRFHGWNRNAEMAVEAFEAGRGPYGDVQRLACG HSFGGVLSSLVLARHPTLFARAVLLDPVLFTPAMIGVMALSETLGLQLRGSLAKKARL RRSQWPDRAAAYAGLRGRGIFKGWTDEALWAYVEYALKESDGGVELKCRPSREAEIFS SFPRRLWPSLGKITTPTRVLYGDRTYPFVAKSVARWCSLNPQVSAHVVVGGHCFMQED PADAAERVRDFLLPNP" misc_feature 6206328..6207155 /gene="poxA" /locus_tag="PA5513" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene 6207241..6208029 /locus_tag="PA5514" /db_xref="GeneID:877990" CDS 6207241..6208029 /locus_tag="PA5514" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="beta-lactamase" /protein_id="NP_254201.1" /db_xref="GeneID:877990" /translation="MRPLLFSALLLLSGHTQASEWNDSQAVDKLFGAAGVKGTFVLYD VQRQRYVGHDRERAETRFVPASTYKVANSLIGLSTGAVRSADEVLPYGGKPQRFKAWE HDMSLRDAIKASNVPVYQELARRIGLERMRANVSRLGYGNAEIGQVVDNFWLVGPLKI SAMEQTRFLLRLAQGELPFPAPVQSTVRAMTLLESGPGWELHGKTGWCFDCTPELGWW VGWVKRNERLYGFALNIDMPGGEADIGKRVELGKASLKALGILP" misc_feature 6207280..6208026 /locus_tag="PA5514" /note="Beta-lactamase class D [Defense mechanisms]; Region: YbxI; COG2602" /db_xref="CDD:442014" gene complement(6208042..6208542) /locus_tag="PA5515" /db_xref="GeneID:878627" CDS complement(6208042..6208542) /locus_tag="PA5515" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254202.1" /db_xref="GeneID:878627" /translation="MGANSHGENTPHSLPAGRTGKLAVPLHRIPLVTLGNLFVMLLLG AAAAWWWRAHGVRERALLLAKRHCAKQGVELLDENVARRRLRLARDHRGQWRLSREFG FEFTVSGEERYAGRIVMYGYHLGAIELAPHRFEAAAEVDNPPVHSAEVIRLDEWRQSR QKKVGD" misc_feature complement(6208150..6208383) /locus_tag="PA5515" /note="Protein of unknown function (DUF3301); Region: DUF3301; pfam11743" /db_xref="CDD:432041" gene 6208575..6209441 /gene="pdxY" /locus_tag="PA5516" /db_xref="GeneID:878628" CDS 6208575..6209441 /gene="pdxY" /locus_tag="PA5516" /EC_number="2.7.1.35" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="pyridoxamine kinase" /protein_id="NP_254203.1" /db_xref="GeneID:878628" /translation="MPRTPHLLAIQSHVVFGHAGNAAAVFPMQRIGINVWPLNTVQFS NHTQYGRWTGQVLPPEQIPALVDGIAGIGELGNCDAVLSGYLGSAAQGRAILDVVARI KQANPRALYLCDPVMGHPEKGCIVAPEVSDFLLEEAAAVADYLCPNQLELDSFCDRQP NSLADCVEMARSLLARGPRAILVKHLNYPGKAGDTFEMLLVAADQAWHLQRPLLAFPR QPVGVGDLASGLFLSRLLLGDDLRNAFEFTGAAVHEVLLETQACGSYELELVRAQDRI AHPRVRFDAVRL" misc_feature 6208584..6209438 /gene="pdxY" /locus_tag="PA5516" /note="pyridoxal kinase PdxY; Region: PRK05756" /db_xref="CDD:235592" misc_feature order(6208608..6208610,6208629..6208634,6208701..6208703, 6208710..6208715,6208728..6208730,6208827..6208829, 6208833..6208835,6209235..6209240,6209247..6209249) /gene="pdxY" /locus_tag="PA5516" /note="pyridoxal binding site [chemical binding]; other site" /db_xref="CDD:238578" misc_feature order(6208611..6208613,6208617..6208622,6208626..6208628, 6208638..6208640,6208650..6208652,6208659..6208661, 6208674..6208691,6208698..6208700,6208707..6208709, 6208734..6208739,6208743..6208745,6208764..6208769, 6208788..6208790) /gene="pdxY" /locus_tag="PA5516" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238578" misc_feature order(6208914..6208916,6208929..6208931,6209010..6209012, 6209016..6209018,6209025..6209027,6209124..6209129, 6209160..6209162,6209205..6209207,6209211..6209216, 6209232..6209234,6209241..6209249,6209253..6209255, 6209328..6209330,6209340..6209342) /gene="pdxY" /locus_tag="PA5516" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:238578" gene complement(6209479..6210063) /locus_tag="PA5517" /db_xref="GeneID:877918" CDS complement(6209479..6210063) /locus_tag="PA5517" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254204.1" /db_xref="GeneID:877918" /translation="MLRRLYDWTLRLAGHPRAELALGGVTFAESSFFPIPPDALLVPM VLANRAKAWRYAAICAISSVLGGIAGYFIGLLLFESVAMPILAFYGLLENFEQVAERY NELGWLMVLLGGGFTPLPYKVITITSGVTQLDLWLFVGLSLVARSLRFAATCALLFWA GPRLKTLIERRLGMAFVLMAVMVVGGLMLGKYVL" misc_feature complement(6209572..6210063) /locus_tag="PA5517" /note="Uncharacterized membrane protein YqaA, VTT domain [Function unknown]; Region: YqaA; COG1238" /db_xref="CDD:440851" gene complement(6210065..6211768) /locus_tag="PA5518" /db_xref="GeneID:877919" CDS complement(6210065..6211768) /locus_tag="PA5518" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="potassium efflux transporter" /protein_id="NP_254205.1" /db_xref="GeneID:877919" /translation="MHHTPLLTTLAAGFVLAFLFGALANRLRISPLVGYLLAGVLAGP FTPGYVADQALSQEIAELGVILLMFGVGLHFSLKDLLSVKAIAIPGALVQIGVATLLG IGLAKLLGWSFGGGLVFGLSLSVASTVVLLRALEQRQLLDTKRGRIAIGWLIVEDLAM VLTLVLLPALAGTLGGKTDGGDAGLLWPLLITLGKVAAFVALMIFGGRRVVPWVLERI AASGSRELFTLAVLAIALGIAYGSAVLFGVSFALGAFFAGMILNESELSHEAAENSLP LRDAFAVLFFVSVGMLFNPMILLQEPLTVLATFLVIVFGKSVAAYLIVRAFGHPNSTA LVIAASLAQIGEFSFILIGLGIGLELVPEQSRDLVLAGAILSILVNPLLFIAIDRLQQ RKEQRLAEAAGGVREMPAQDLPPPILEREHAVLIGHGRVGGLVSARLRTAGTPFVVVV DKRDKADELREQGYSVVLGNAASPGVLELANIAEARWLLIAIPNGFEAGQIASHARAV NPPLDIVARAHFDAEVDYLEQNGANLVIMGEREIACGMVHRLGLDRDERGADAPLPQS A" misc_feature complement(6210119..6211768) /locus_tag="PA5518" /note="putative cation:proton antiport protein; Provisional; Region: PRK10669" /db_xref="CDD:182633" gene complement(6212147..6212713) /locus_tag="PA5519" /db_xref="GeneID:879691" CDS complement(6212147..6212713) /locus_tag="PA5519" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="acyl-CoA thioesterase" /protein_id="NP_254206.1" /db_xref="GeneID:879691" /translation="MTIENLWPLPSSFASMVSPARPDERKSAMQPGNNQLSMTVLMTP DMANFSGNVHGGTLLKYLDEVAYACASRYAGRYVVTLSVDQVIFREPVHVGELVTFLA SVNYTGRTSMEIGVKVITENIREQSVRHTNSCFFTMVALDDERKPVAVRPLELETAEQ KRRFAQAQQRRQLRAELEARYQAIREDG" misc_feature complement(6212192..6212611) /locus_tag="PA5519" /note="Acyl-CoA hydrolase [Lipid transport and metabolism]; Region: YciA; COG1607" /db_xref="CDD:441215" gene 6212790..6213533 /locus_tag="PA5520" /db_xref="GeneID:879692" CDS 6212790..6213533 /locus_tag="PA5520" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254207.1" /db_xref="GeneID:879692" /translation="MPAAIRILLLALAVLAGIGAAAIQAEDTPCATAAECNTRGTQAY RQGSYPQALDAFAWQLRLAERQEQGGADSEQALNNLALTSLKAGQPGRARAWMNLALD RGYSGKATRYNLEQVALKVDYPSLQGLAGHYLRYAGQAEWESLQIEPVKGGYQASFAL MRIGNPEKLMEYGPAAVGELSGRLEGQGALYRLRSEGLGAGCSLLVWQEGIDLRVVES LGGDCQGYGGMGIAAAGNWVKISSQARDD" gene complement(6213581..6214339) /locus_tag="PA5521" /db_xref="GeneID:879693" CDS complement(6213581..6214339) /locus_tag="PA5521" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_254208.1" /db_xref="GeneID:879693" /translation="MSTPVVLITGAAGGLGRAIAKRFAQSHWRIAATDVDKEGLHALN AQVPLDASGVADLRSADNCHTLMSKILARTGRLDALVNAAGVWREGPVENFTEEDFDL VLGVNLKASFYMCQAAIPYLKENQGSIVNISSDSGRQAYRGSAAYCASKAALTMLSKT LALELAEQGVRVNAVSPADIATPMLDYQAERYGMGNPDGYKRALLKDYPQGKAARFIR PEEVAELVWYLCGPQAEAITGADLAVDFGLSAGR" misc_feature complement(6213590..6214339) /locus_tag="PA5521" /note="NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Lipid transport and metabolism]; Region: FabG; COG1028" /db_xref="CDD:440651" gene complement(6214434..6215801) /locus_tag="PA5522" /db_xref="GeneID:877956" CDS complement(6214434..6215801) /locus_tag="PA5522" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="glutamine synthetase" /protein_id="NP_254209.1" /db_xref="GeneID:877956" /translation="MHFADPREAREFLAAHPEVRSIELFLIDANGVPRGKLLHRDELL AVYESGRPLPSTILGLTINGDDVEETGLVWDVGDADCWTFPLPGSLTLQPWRQSPTGQ VQVSMHPELGLPAAAGDPRHVLQRVIHSLQAEGFHPVMAVELEFYLLDRERDSDGRPL PALQMNGQRPRATQVYGVYELEQLQPFLDDLYAACEAQGLPARTAISEYAPGQVEITL QHRFDTLQAIDEGVRYKRLVKGVANRHGLQACFMAKPFADLSGSGLHLHVSLADAAGN NLFASEDPAGTPLLRQAIGGMKACLLESLALFCPNANSFRRFQANSYAPLAPTWGINN RTVSLRVPGGPASSRHIEHRICGADANPYLAAAALLAAVRLGIRERLDPGAPITGNGY AQATQALPSDWLTALRALEGSAWAREALGEDFLKIYLAIKQAEYRAFMGEVGEQDWRW YLNQA" misc_feature complement(6214446..6215801) /locus_tag="PA5522" /note="Glutamine synthetase [Amino acid transport and metabolism]; Region: GlnA; COG0174" /db_xref="CDD:439944" gene complement(6215803..6217155) /locus_tag="PA5523" /db_xref="GeneID:877957" CDS complement(6215803..6217155) /locus_tag="PA5523" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_254210.1" /db_xref="GeneID:877957" /translation="MAREQQRFLAQNPQSVALAERARRALFDGVPMHWMSDWSTPCPL FVARAHGARFHDVDGHAYVDFCLGDTGSMFGHSPAPIARALAEQGANGLTTMLPGEDA IVAGELLAQRFGLPFWQVATTATDANRFVLRWARAITGRKVVLVFDGCYHGTVDDTLV RCRDGRTVHRSGLLGQAHDLTQFSRAVPFNDLQALERALAGEDVAAVLCEPAMTNIGM VLPQPGFHQKLRELTRRHGTLLIIDETHTISTGPGGCTRAWKLEPDFITLGKPIAGGV PCSVYGCSAAMASAMQLARARASEQSEGHGHSGMGTTLSANALAMRCMRANLEEVMTD TAYAHMLPLAARLAEGFRRIIHKHGLAWSVTELGARSEFQFCPQPPRDGAAAEAAFHD SLQMALHLYLINRGILITPFHNMTLCCPDTREEDVDRLLSSLDEALGELLAIPGAREA " misc_feature complement(6215827..6217155) /locus_tag="PA5523" /note="aminotransferase; Validated; Region: PRK07046" /db_xref="CDD:235917" misc_feature complement(order(6216346..6216348,6216418..6216423, 6216427..6216429,6216526..6216528,6216694..6216696, 6216700..6216705,6216781..6216789)) /locus_tag="PA5523" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99735" misc_feature complement(order(6216346..6216348,6216418..6216420, 6216427..6216429,6216526..6216528,6216700..6216705, 6216781..6216786)) /locus_tag="PA5523" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature complement(6216346..6216348) /locus_tag="PA5523" /note="catalytic residue [active]" /db_xref="CDD:99735" gene 6217313..6218095 /locus_tag="PA5524" /db_xref="GeneID:878183" CDS 6217313..6218095 /locus_tag="PA5524" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_254211.1" /db_xref="GeneID:878183" /translation="MNDFSKWTGQVALISGAGSELGIGFAIARRLAREGVRLLITASS ERIRQRAEELSACGHDVRAASADLTDEAQVQGLLDWAEAQWGRVDILVNNAGMAQLDS AEPFSAVEATSLRDWQLSLSRNLTSAFLLTRGLLPGMRERGYGRIVNVASTTGTRGSN PGEAAYSAAKAGLVGWSMGLALEVAKSGITVNSVAPGWIATASSTAEERQAALASPSG RAGRPEEVAAAVAFLASPEASFVNGELLVVDGGNCLIENKRS" misc_feature 6217313..6218065 /locus_tag="PA5524" /note="NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Lipid transport and metabolism]; Region: FabG; COG1028" /db_xref="CDD:440651" gene 6218100..6218840 /locus_tag="PA5525" /db_xref="GeneID:878184" CDS 6218100..6218840 /locus_tag="PA5525" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_254212.1" /db_xref="GeneID:878184" /translation="MQLQPDAFPASGATGDPELTMAENLQERLYQRLREDLLAGRFQP GERLKIRDLANQWDTSPMPVRAALQRLVAEGALEGEAQRSLRVPLMTRERFLQILQVR LSLEGLAAESASGRLDEQALEGLEGCLRRMEDALRRREVQAYLDANSEFHLTLYRACG NPVLLRLIETLWLQVGPFFNRLFTEADLSLRLNDFHEDALDALRRGDGPAARAAIEQD LAYFGQYLLNLLELEARPRKRHRSGEHA" misc_feature 6218145..6218804 /locus_tag="PA5525" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: GntR; COG1802" /db_xref="CDD:441407" gene complement(6218857..6219069) /locus_tag="PA5526" /db_xref="GeneID:878185" CDS complement(6218857..6219069) /locus_tag="PA5526" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254213.1" /db_xref="GeneID:878185" /translation="MKFKALFAALLLTSLAGCANQAVVTLQDGSEVLVKDQSDYDKYN DYYEFEQLNGDTILIKKDNVRTIRPQ" misc_feature complement(6218866..6219066) /locus_tag="PA5526" /note="Bacterial protein of unknown function (DUF903); Region: DUF903; cl05512" /db_xref="CDD:471259" gene complement(6219287..6219688) /locus_tag="PA5527" /db_xref="GeneID:877963" CDS complement(6219287..6219688) /locus_tag="PA5527" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254214.1" /db_xref="GeneID:877963" /translation="MEDVIEKLRELNEPVPVPLELPEEELLVEIEEELLIGIPAEFRE FLLLVSDVVYGRLEPVTVTDPHSHTYLPEVAATAWDLGVPRELIPLCEDDGSYYCVAE DGEVVLWADGDLTDESWDSVWVWARDVWLES" misc_feature complement(6219296..>6219577) /locus_tag="PA5527" /note="SMI1-KNR4 cell-wall; Region: SUKH_5; pfam14567" /db_xref="CDD:434042" gene complement(6219885..6220739) /locus_tag="PA5528" /db_xref="GeneID:877964" CDS complement(6219885..6220739) /locus_tag="PA5528" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254215.1" /db_xref="GeneID:877964" /translation="MQRVLSIALAFCLALTVSLDANAKRFGGGKSLGSAPSHQTRQAQ PATAPNATAAAPNAARPAAAASGASRWLGPLAGIAAGGLLASMFMGDGFEGIQMLDIL LIALVAFIAFRFIAARRRQQNQGQPAMAGHAPMQREMPAQAPIFGGAAAAAAAPSPVI NAPSWFNEERFVGAAREHFMSLQQHWDANEMDKIAEFVTPQMLQWLKQERAEIGDAYQ STYIDNLVVQLDGVDDQADKTIATLTFSGVSKTSRFDQGEAFSESWRMERAQGENQPW LVAGIRQN" misc_feature complement(6219888..6220457) /locus_tag="PA5528" /note="Predicted lipid-binding transport protein, Tim44 family [Lipid transport and metabolism]; Region: Tim44; COG4395" /db_xref="CDD:443521" gene 6221101..6222858 /locus_tag="PA5529" /db_xref="GeneID:878116" CDS 6221101..6222858 /locus_tag="PA5529" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="sodium/proton antiporter" /protein_id="NP_254216.1" /db_xref="GeneID:878116" /translation="MHAVDFIQDLAVIMLVAGVVTILFHRLRQPVVLGYIVAGFIIGP HTPPFGLIHDEDTIKTLAELGVIFLMFCLGLEFSLRKLFQVGATAFIAAFLEIVLMIW IGFEIGRFFEWSTMDSLFLGAILAISSTTIIVKALGDLKMKNERFAQLIFGVLIVEDI LGIGIIALLSGIAVSGSVETGEVFSTVGKLSLFMIVALVVGILLVPRLLAYVAKFESN EMLLVTVLGLCFGFCLLVVKLEYSMVLGAFLIGAIMAESRQLVQIERLIEPVRDMFSA IFFVAIGLLIDPKILVEYAWPIALITVAVVLGKMFSCGMGAFIAGNDGRTSLRVGMGL SQIGEFSFIIAALGMTLKVTSDFLYPVAVAVSAITTLLTPYLIRAADPLSQHLANAMP QRMARIFGHYGDWLRSIQPQGDRAVLAAMIRRILLQVGVNLALVIAIFLAGGYFADTL SAWMSQWVAYDGLHKALIWGGALLVSLAFLIAAYRKLKALSMLLAELGVKPEKAGRHT ARVRRVISEIIPLLSLAGMMVLLAALSSSILPPGELLVVVVLVAGLVIAVLWRWLIRV HSRMQIALMETLDQEKGSH" misc_feature 6221101..6222729 /locus_tag="PA5529" /note="Predicted Kef-type K+ transport protein, K+/H+ antiporter domain [Inorganic ion transport and metabolism]; Region: RosB; COG4651" /db_xref="CDD:443689" gene 6223174..6224481 /locus_tag="PA5530" /db_xref="GeneID:878117" CDS 6223174..6224481 /locus_tag="PA5530" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="MFS dicarboxylate transporter" /protein_id="NP_254217.1" /db_xref="GeneID:878117" /translation="MESANAISASAQPRTTSQRIKSIFSGSVGNLVEWYDWYVYAAFS LYFAKAFFPQGDMTAQLLNTAAIFAVGFLMRPIGGWLMGIYADRKGRKAALLASVLLM CFGSLIIALTPSYETIGVAAPILLVVARLLQGLSVGGEYGTSATYLSEMANKEQRGFF SSFQYVTLISGQLIALAVLIVLQQTLTVEQLESWGWRVPFFIGALCAVVAMFLRRGME ETESFSKKKEEPKESLLRTLLRHPKEVLTVVGLTMGGTLAFYTYTTYMQKYLVNTVGM SKTDSTMISAATLFLFMLLQPIVGALSDKIGRRPILIAFGVLGTVFTYPILSTLHSVD SWWGAFFLIMAALVIVSGYTSINAVVKAELFPTEIRALGVGLPYALTVSIFGGTAEYV ALWFKSVGLESGFYWYVTACIACSLLVYVFMKDTQKHSKITTD" misc_feature 6223240..6224454 /locus_tag="PA5530" /note="Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; Region: MFS_KgtP; cd17367" /db_xref="CDD:340925" misc_feature order(6223270..6223275,6223282..6223287,6223294..6223296, 6223408..6223410,6223582..6223587,6223591..6223599, 6223606..6223608,6223666..6223668,6223675..6223680, 6223687..6223689,6223927..6223929,6223936..6223941, 6223948..6223956,6223963..6223965,6224047..6224049, 6224059..6224061,6224218..6224223,6224233..6224235, 6224245..6224247,6224293..6224295,6224302..6224307, 6224314..6224319,6224326..6224328) /locus_tag="PA5530" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340925" gene complement(6224897..6225925) /gene="tonB1" /locus_tag="PA5531" /db_xref="GeneID:878138" CDS complement(6224897..6225925) /gene="tonB1" /locus_tag="PA5531" /note="Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa" /codon_start=1 /transl_table=11 /product="transporter TonB" /protein_id="NP_254218.1" /db_xref="GeneID:878138" /translation="MSPQPSRSPDRFSLAALAEDHPTAPAQGDESESLPCVNAQRGEP NLRVVDCSGARRDEEVAVEEVLIPYAHGSDPEDVPGEPPKSRWWLSSGAAVAMHVAII GALVWVMPTPAELNLGHGELPKTMQVNFVQLEKKAEPTPQPPAAAPEPTPPKIEEPKP EPPKPKPVEKPKPKPKPKPKPVENAIPKAKPKPEPKPKPEPEPSTEASSQPSPSSAAP PPAPTVGQSTPGAQTAPSGSQGPAGLPSGSLNDSDIKPLRMDPPVYPRMAQARGIEGR VKVLFTITSDGRIDDIQVLESVPSRMFDREVRQAMAKWRFEPRVSGGKIVARQATKMF FFKIEKRR" misc_feature complement(6224912..6225145) /gene="tonB1" /locus_tag="PA5531" /note="Gram-negative bacterial TonB protein C-terminal; Region: TonB_C; pfam03544" /db_xref="CDD:427361" protein_bind 6225966..6225984 /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /note="Transcription factor binding site for NP_253452." /bound_moiety="Fur" protein_bind complement(6225972..6225990) /experiment="DNAse footprinting [PMID: 8633080]" /experiment="EMSA [PMID: 8633080]" /experiment="Genomic SELEX [PMID: 8633080]" /note="Transcription factor binding site for NP_253452." /bound_moiety="Fur" gene complement(6226018..6226979) /locus_tag="PA5532" /pseudogene="unknown" /db_xref="GeneID:878139" gene 6227082..6227450 /locus_tag="PA5533" /db_xref="GeneID:878140" CDS 6227082..6227450 /locus_tag="PA5533" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254220.1" /db_xref="GeneID:878140" /translation="MRPFLFFLSCLPGLALAEACIVHSQAKNLDVKVCQQNRSIPAKL FREGFCQPQLQGQKVEVTFAEECPTGAFGVCRDARVPNAPYRQDIFYYGIATDARYLE PFCASQSQGRWEEPSAAKKP" gene complement(6227603..6228244) /locus_tag="PA5534" /db_xref="GeneID:883064" CDS complement(6227603..6228244) /locus_tag="PA5534" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254221.1" /db_xref="GeneID:883064" /translation="MSALPQEKPLPRQAFDDDPQVLAEVLREGVNLAVWTRRLSPALR DFAAALVRNRPGLALSQTLEMEEERLPVLDGLLDAQQLPGQTDFLDDLGWLVEAFSCL TGARRIGLRLRVLDKPMCPRFHVDHVPLRLVTTYQGAASEWLDESGLDRRLLGGAQAE VVDEQLIHSLSTGDVALLKGERWEGNEGAGLVHRSPRAEPGLARLLLTLDWLA" misc_feature complement(6227615..6228187) /locus_tag="PA5534" /note="Protein of unknown function (DUF1826); Region: DUF1826; pfam08856" /db_xref="CDD:430263" gene complement(6228241..6229443) /locus_tag="PA5535" /db_xref="GeneID:883065" CDS complement(6228241..6229443) /locus_tag="PA5535" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254222.1" /db_xref="GeneID:883065" /translation="MNQRLPVTVLSGFLGAGKSTLLNHVLKNRENRRVAVIVNDMSEI NIDGSEVQRDVSLNRAEERLVEMSNGCICCTLREDLLEEVGRLAREGRFDYLLIESTG ISEPMPVAETFTFRDELDRSLSDVARLDTMVTVVDGMNFLRDYQEAASLASRGETLGE EDQRSITDLLIDQVEFADVILVSKIDLISSEQREELLAILRQLNAEAEILPMVMGQVP LAKILDTGRFDFDRAASAPGWLKELRGEHLPETEEYGIASMAYRARRPFHPARFHAFL HNPLKQGRLLRSKGFFWLASRPREAGSWSQAGGLMRYGLAGRWWRFVPTGQWPQDEEG LRAIMRHWEEGVGDCRQELVFIGQNLDFAALRAALDACLLDDAEMNLGIPGWQGLDDP FEDWGHAA" misc_feature complement(6228265..6229431) /locus_tag="PA5535" /note="zinc metallochaperone GTPase ZigA; Region: chaper_GTP_ZigA; NF038288" /db_xref="CDD:468453" gene complement(6229458..6229862) /locus_tag="PA5536" /db_xref="GeneID:877722" CDS complement(6229458..6229862) /locus_tag="PA5536" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254223.1" /db_xref="GeneID:877722" /translation="MTEQELLAQPDAAYMDEAQQDFFRDLLLRQRQELQARIEGEFGE LRDLERPSDEADLASREEQRQWQLRLLEREKKLLDKIDEALERLARGDYGWCQETGEP IGLRRLLLRPTATLCIEAKERQEKRERHVRHN" misc_feature complement(6229494..6229820) /locus_tag="PA5536" /note="Prokaryotic dksA/traR C4-type zinc finger; Region: zf-dskA_traR; cl00755" /db_xref="CDD:445081" gene 6229975..6230391 /locus_tag="PA5537" /db_xref="GeneID:877723" CDS 6229975..6230391 /locus_tag="PA5537" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254224.1" /db_xref="GeneID:877723" /translation="MRRVLRLYCLALLLLAPAAQAQGFLPGTRPAECAYLRTVLACMD RLGNHYSVATGGNDTWLRGYDAASGRRWAQTNTRYGRLTFFSGIASDGEIWVGLSRNI GWTSVSRLSSSSGQRQRLTCGRVSGCSEGPSREAAR" gene complement(6230369..6231562) /gene="amiA" /locus_tag="PA5538" /db_xref="GeneID:877724" CDS complement(6230369..6231562) /gene="amiA" /locus_tag="PA5538" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase" /protein_id="NP_254225.1" /db_xref="GeneID:877724" /translation="MKRRRLLQSLLAGLALQPFLAASANVRIRQARAWNSSESWRLVL ELDGPPRYRTFSLQAPERLILDLPDAQLLATLSELPLDGPVRAIRSGQLGGGGTRIVL DLRQAVRPRSFALEPQAGKGHRLVLDLYPQALAAPPEPMLALARPLPSTGRDILVVVD AGHGGKDPGAVGSKGEREKDVALAIARLLARRIDREKGFKARLVRNGDVFVPLRKRPE VARRYNADMFVSVHADAAPRLTASGASVYALSEHGASSTMARWMAERENGADLIGNSG NLPLQGRDKVLAGVILDMALSSTIASSLDLGHSVLGQLSDVTALHQKRVEQAGFAVLK SPDIPSILVETGFISNRGDCRRLMDERHRQRLAEAIFAGVQGYFRQRPPAGSYLAALS AQPPG" misc_feature complement(6230372..6231460) /gene="amiA" /locus_tag="PA5538" /note="N-acetylmuramoyl-l-alanine amidase II; Provisional; Region: PRK10431" /db_xref="CDD:236692" gene 6231662..6232558 /locus_tag="PA5539" /db_xref="GeneID:877616" CDS 6231662..6232558 /locus_tag="PA5539" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase" /protein_id="NP_254226.1" /db_xref="GeneID:877616" /translation="MNALTLPDIARQTTTADLPLDWVGMQGIALPVQIGGQRVAAEAD AGVSLDDPQARGIHMSRLYLALAELEQGELDLSCLRAVLQRFLDSHAGLSRRAYLRLR LAPLLRRPALVSPLSGWKRYPLVLDTRLEGDDFQAEVHLELTYSSTCPCSAALARQLI QERFDQDFAGQPLDHASVLAWLGSSAGIVATPHSQRSSAHLRIGLAEDCIGLPLEELA DLGESALGTAVQTAVKRADEQAFALANGQNLMFCEDAVRRLHRALQGYPQASRFSIRV VHAESLHAHDAVAESHWQRGAA" misc_feature 6231662..6232546 /locus_tag="PA5539" /note="GTP cyclohydrolase I FolE2; Region: PRK13674" /db_xref="CDD:237466" gene 6232555..6233115 /locus_tag="PA5540" /db_xref="GeneID:877617" CDS 6232555..6233115 /locus_tag="PA5540" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254227.1" /db_xref="GeneID:877617" /translation="MIRKNPSGDLPVIDESAYVDKTAIICGKVIIQANVFVGPYAVIR ADEVDADGGMQPIVIGANSNIQDGVVIHSKSGAAVTIGEHSSIAHRSIVHGPCEVGDR VFIGFNSVLFNCRVGDGCVVRHNAVVDGCDLPAGFYVPSTERIGPRTDLASMPRVSVS ASEFSEDVARTNVDLVRGYKSLQNEF" misc_feature 6232579..6233097 /locus_tag="PA5540" /note="Gamma carbonic anhydrases (CA): Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed...; Region: LbH_gamma_CA; cd00710" /db_xref="CDD:100039" misc_feature order(6232606..6232608,6232612..6232614,6232618..6232623, 6232630..6232632,6232666..6232668,6232675..6232680, 6232684..6232686,6232690..6232692,6232753..6232758, 6232768..6232770,6232819..6232830,6232834..6232836, 6232873..6232875) /locus_tag="PA5540" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:100039" misc_feature order(6232768..6232770,6232819..6232821,6232834..6232836) /locus_tag="PA5540" /note="active site" /db_xref="CDD:100039" gene 6233118..6234455 /gene="pyrQ" /locus_tag="PA5541" /db_xref="GeneID:878465" CDS 6233118..6234455 /gene="pyrQ" /locus_tag="PA5541" /EC_number="3.5.2.3" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="dihydroorotase" /protein_id="NP_254228.1" /db_xref="GeneID:878465" /translation="MQSLLIRNARMVNEGQVREGDLLVRHGRIERIAGCLENCGASRE IDAAGRYLLPGMIDDQVHFREPGYPQKGSIASESRAAVAGGITSFMDMPNTRPATLSL EALAEKKRLAAAHSVANYGFHFGVSRDNLDTVAALDPREVAAVKVFMGASTGDMLVDD LPTLERLFASVPTLLLSHCEDTPRIEANLARWRQRFGERIPAAAHPRIRDAEACYRST ALAVELAQRHGTLLHVLHLSTARELALFEDKPLCQKRITAEVCVHHLLFDDSDYARLG HLLKCNPAIKSREDRDALRRALAGNRLDVIGTDHAPHAWAEKQQAYPQAPAGLPLVQH ALPALLELVREGWLSLATLVAKTSHRVAELFAIADRGFLREGYWADLVLVSELEHPAL ASAMPLLSRCNWTPFRHRAFHHRIDTTIVSGQLAWHAGRLSDDCQGLPLRFSR" misc_feature 6233118..6234452 /gene="pyrQ" /locus_tag="PA5541" /note="dihydroorotase; Reviewed; Region: PRK09236" /db_xref="CDD:181716" misc_feature order(6233295..6233297,6233301..6233303,6233649..6233651, 6233823..6233825,6234042..6234044) /gene="pyrQ" /locus_tag="PA5541" /note="active site" /db_xref="CDD:238643" gene complement(6234500..6235744) /locus_tag="PA5542" /db_xref="GeneID:878466" CDS complement(6234500..6235744) /locus_tag="PA5542" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254229.1" /db_xref="GeneID:878466" /translation="MRSCISVFRPALLALFVSASGSAGADAAVENPRIGRAADLYELI PEYQPDTYRNMDKVYPTRVIHKGTKVRPLPAGVAIAPRYRIGGEEYGVDDFMRRNRVG GVLILKDGKVALERYGLGNDERTRWTSFSVVKSISSTLVGAAVQQGLLALDQPVDKYL PSLAGSAYQGVTVEQVLQMSSGVRWNETYRDPKSDRRQMFDAQLAERPGGILRLLASL PRQYPSGTHFTYSTGESHLQSELLHAATRIPVSDYLSERIWARMGMESDGFWQLESPA GQEIGSSGLSATLRDYGRFGQFVLEDGVIDGERILPEGWVDRASRVEASSHLAPGKLY DGEYALGYGYQWWTFPVGAKALPEHDGGAFEAQGIFGQYLYINRKEKIVAVVWSAWPK PEMDDREEETYAFLGAAVKALR" misc_feature complement(6234506..6235471) /locus_tag="PA5542" /note="CubicO group peptidase, beta-lactamase class C family [Defense mechanisms]; Region: AmpC; COG1680" /db_xref="CDD:441286" gene complement(6235831..6236229) /locus_tag="PA5543" /db_xref="GeneID:879588" CDS complement(6235831..6236229) /locus_tag="PA5543" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254230.1" /db_xref="GeneID:879588" /translation="MIALCLGMAGSVWATLPLQSFTLAWQHTVEKVLWEEDYRLSERG LLLEEARVRGSGAGMEIPEGAVLRDGAWHYHRGVPPLQPLRLGRTPEAGDYRICRQGR CDALARWIGPPDPERPAVELWACPIRDPSD" misc_feature complement(6235849..>6236193) /locus_tag="PA5543" /note="Uncharacterized conserved protein, DUF1850 family [Function unknown]; Region: COG4729" /db_xref="CDD:443764" gene complement(6236226..6238250) /locus_tag="PA5544" /db_xref="GeneID:879589" CDS complement(6236226..6238250) /locus_tag="PA5544" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254231.1" /db_xref="GeneID:879589" /translation="MSDHQNGLHLEAENWPRALFAVALAFSVFQVVTAAFPLISTQVL RAMHVGLLLLVVYISYPAFGIGRPWQPLAWLLGMAGLGTAVYQWVFEGDLIQRSGELT QADMVVGVVLIVLVFEAARRVMGIALPIICALFLAYGLFGEHLPGDLAHRGYGFDQIV NQLSFGTEGLYGTPTYVSATYIYLFILFGAFLEQAGMIRLFTDFAMGLFGHRVGGPAK VSVFSSALMGTITGSGVANVVTTGQFTIPLMKRFGYKPAFAGGVEATASMGSQLMPPV MGAVAFIMAETINVPYVEIAKAALIPALLYFGSVYWMVHLEARRADLKGLPRDQCPSA WGAVRERWFLLIPLLVLIALLFSGRTPLFSGTIGLALTAIVILGSAIILRVSSLGLRI AFWVALGLLCAGFFRLGIGVIFVVIAALALACWFVRGGRETLRICVRALAEGARHAIP VGIACTLVGVIIGVISLTGIATTFASYVLDLGRENLLLSLVLTMVTCLVLGMGIPTIP NYIITSSIAAPALLELGVPLIVSHMFVFYFGILADLTPPVALACFAAAPIAKERGLKI SFWAVRIALAGFVVPFMAVYSPALMLQEGGWGATLYVTCKAVLAIGLWGMASIGYLQG PLAWWERLVAFAAGASLVLALPISDELGFVLGALVIGWHLWRQRAREAVA" misc_feature complement(6236238..6238208) /locus_tag="PA5544" /note="TRAP-type uncharacterized transport system, fused permease components [General function prediction only]; Region: COG4666" /db_xref="CDD:443703" gene complement(6238325..6239284) /locus_tag="PA5545" /db_xref="GeneID:879590" CDS complement(6238325..6239284) /locus_tag="PA5545" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254232.1" /db_xref="GeneID:879590" /translation="MSLSRRFGLFTLAATVTFSTSVFAAPTFINILTGGTSGVYYPIG VGLSQIYGHDIQGAKTSVQATKASVENLNLLQAGRGELALALGDSVADAWNGVADAGF KAPLKKLRAIGNTYPNYIQVVASQASGIKTLADLKGKRISVGAPKSGTELNARAIFKA AGLSYEDMGKVEYLPYAESVELIKNRQLDATLQSSGLGMAAIRDLASTMPITFVAIPA DVVAKIDSPAYHAASIPAGTYDGQEQDVPTVAIDNILVSHSGVSDELAYQMTKLMFDN LPRLVTAHAAAKDIALDKAAKNLPIPLHPGAERFYKEKGVLPE" misc_feature complement(6238340..6239269) /locus_tag="PA5545" /note="TRAP transporter solute receptor, TAXI family; Region: TRAP_TAXI; TIGR02122" /db_xref="CDD:273982" gene complement(6239448..6240632) /locus_tag="PA5546" /db_xref="GeneID:878170" CDS complement(6239448..6240632) /locus_tag="PA5546" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254233.1" /db_xref="GeneID:878170" /translation="MIAQLPSELLSLQLPLRIRIGDAQAFDLGPDPQVTMVIRDPSLL TEITHPSLDALGKAYVEKRLDIEGPISQVIGIGDALSEALGEPDGGAPPVRESHDKDT DAEAIHYHYDLSNDFYQLWLDPEMVYSCAYFETGKEDLATAQLAKLRHLCRKLRLQPG EKLLDVGCGWGGLARLAAREFGVEVTGITLSKEQLALGRERVKAEGLEDRVTLKLLDY RDLPRDGRFDKVVSVGMFEHVGHANLGLYFQQLYEAVRPGGLVMNHGITSRYTDGRPV GKGAGDFIDRYVFPHGELPHLSLAVARMSEAGLEVVDVESLRLHYARTLDFWSANLEA RLKEAARLVPEETLRIWRLYLAGCAYGFKRGWINLHQILAIRPHEDGSHELPWSRRDL YA" misc_feature complement(6239454..6240632) /locus_tag="PA5546" /note="C17 cyclopropane fatty acid synthase CfaB; Region: cyclopro_CfaB; NF040703" /db_xref="CDD:468667" gene 6240870..6241493 /locus_tag="PA5547" /db_xref="GeneID:878171" CDS 6240870..6241493 /locus_tag="PA5547" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254234.1" /db_xref="GeneID:878171" /translation="MNETVSLETREVRFLSVFDFDGTLTYRDSFVPFLRFAFGNRVFV RRMLRMAGPSLAYLCRRIDRDDLKARLIATFLTDVPVHVLEERALAYQNRFWETLMRP HALTAVADQVSSGSTVTICSASPSLLLRPFAEKLGVHLIATELEVVDGVLTGRIVGRN CRRDEKVCRLERHYGPLTQYSLRAWGDSRGDTELLAAALERFWKPFR" misc_feature 6240912..6241463 /locus_tag="PA5547" /note="Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; Region: HAD-SF-IB; TIGR01488" /db_xref="CDD:273653" misc_feature order(6240924..6240938,6241233..6241238,6241365..6241367, 6241425..6241430,6241437..6241442) /locus_tag="PA5547" /note="active site" /db_xref="CDD:319763" gene 6241851..6243056 /locus_tag="PA5548" /db_xref="GeneID:877796" CDS 6241851..6243056 /locus_tag="PA5548" /note="'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter" /protein_id="NP_254235.1" /db_xref="GeneID:877796" /translation="MNQKISPPSQKLDGLFLLALSMAVFFVGVTEFMLSSMLGPLAQA FHTTTSGAAWLISSYAFSYAIAAPLLGYFSDRMQRRKLLLLALVLFAVDTLAIVIAPT LEIAVVLRVIGGIASAIIIPTTFALVAEVVAPQRQAGAMGQVMLGMTLGIAAGPALAG LLSDFFGWAAPFLLVSCGCVLVFLMARQRLPVQAVAPRAEGHALGWCRQWSILRPLIA KGAWNGTGVAGLLLSGEVLRQRYGFSTAQIGVSIAAFGVGLAVGNLAAGYLRRYLKRD EDMLLLVLALLVLSMSTFMLLPLPLPVALCCLGAWGAALGLGAPAGTVVLASRSGPDK GMVLSFAETFNNIAILASVPLAVRLLELKGPPATLWVLGIGLGIGAWFTVLDWFASRR SNEALPLRD" misc_feature 6241899..6242999 /locus_tag="PA5548" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" misc_feature order(6241929..6241934,6241941..6241946,6241953..6241955, 6242049..6242051,6242199..6242204,6242208..6242216, 6242223..6242225,6242283..6242285,6242292..6242297, 6242304..6242306,6242505..6242507,6242514..6242519, 6242526..6242534,6242541..6242543,6242625..6242627, 6242637..6242639,6242790..6242795,6242805..6242807, 6242817..6242819,6242862..6242864,6242871..6242876, 6242883..6242888,6242895..6242897) /locus_tag="PA5548" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:349949" protein_bind complement(6242497..6242509) /experiment="ChIP-Seq [PMID: 24603766]" /experiment="RNA-Seq [PMID: 24603766]" /note="Transcription factor binding site for NP_252075." /bound_moiety="AmrZ" gene complement(6243111..6244946) /gene="glmS" /locus_tag="PA5549" /db_xref="GeneID:877797" CDS complement(6243111..6244946) /gene="glmS" /locus_tag="PA5549" /EC_number="2.6.1.16" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="glucosamine--fructose-6-phosphate aminotransferase" /protein_id="NP_254236.1" /db_xref="GeneID:877797" /translation="MCGIVGAIAERNITPILIEGLKRLEYRGYDSAGVAVFDNEGRLQ RCRRVGKVASLEEGLAGTPLLGRLGIAHTRWATHGAPTEGNAHPHFSSDEVAVVHNGI IENHEPLRERLKGLGYVFTSQTDTEVIVHLLHHKLQSIGDLTLALKDAVKELHGAYGL AVISAAQPDRIVAARSGSPLVIGLGLGENFLASDQLALRQVTDRFIYLEEGDIAEIRR DSVRLWDVQGNDVQRETVQYHEGAEAADKGEYRHFMLKEIHEQPSVVQRTLEGRLGQN QVLVESFGPQAAELFAKVRNVQIVACGTSYHAGMVARYWLESLTGIPCQVEVASEFRY RKVAVQPDCLFVTISQSGETADTLAALRNAKELGFLSSVAICNVATSSLVRESDLTLL TQAGPEIGVASTKAFTTQLVALLLLTLGIGQVQKRLADGVEAELVDELRRLPTRLGEA LAMNRTVEKVSELFAEKHHTLFLGRGAQFPVALEGALKLKEISYIHAEAYPAGELKHG PLALVDSDMPVVTVAPNNELVEKLKSNLQEVRARGGELVVFADEGAGIEAGEGTHVVG MPHIGDVLSPILYTIPLQLLSYHVAVLKGTDVDQPRNLAKSVTVE" misc_feature complement(6243114..6244946) /gene="glmS" /locus_tag="PA5549" /note="Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell wall/membrane/envelope biogenesis]; Region: GlmS; COG0449" /db_xref="CDD:440218" gene complement(6244962..6245735) /gene="glmR" /locus_tag="PA5550" /db_xref="GeneID:877890" CDS complement(6244962..6245735) /gene="glmR" /locus_tag="PA5550" /note="Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)" /codon_start=1 /transl_table=11 /product="GlmR transcriptional regulator" /protein_id="NP_254237.1" /db_xref="GeneID:877890" /translation="MISKRNTPQRRHAILALLSEQGEVSVDALAKRFSTSEVTIRKDL AAMESHGLLLRRYGGAVPMPQELIGEAAQPVSPYKQAIGRAAAARIREHARIIIDSGS TTAAMIPELGHKPGLVVMTNSLNVVNALRELEHEPVLLMTGGTWDPHSESFQGQVAEQ VLRSYDFDQLFIGADGIDLERGTTTFNELLGLSRVMAEVAREVIVMAEADKVGRRIPN QELPWSSIHTLITDERLESSAREQITARGVTLICTPVEA" misc_feature complement(6244974..6245720) /gene="glmR" /locus_tag="PA5550" /note="DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family [Transcription, Carbohydrate transport and metabolism]; Region: GlpR; COG1349" /db_xref="CDD:440960" gene complement(6245803..6246312) /locus_tag="PA5551" /db_xref="GeneID:877891" CDS complement(6245803..6246312) /locus_tag="PA5551" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254238.1" /db_xref="GeneID:877891" /translation="MPKPAKRIVLGLLIAWAVLPEWPRIPVEGASARDWNPRTFWFEP WGRSGVHKGIDIFARSGTPVRSASYGLVLYRGEIALGGKVVLVLAPKWRLHYYAHLDS LDAYPGQPVLAGSRLGTVGTTGNARGKPAHLHYAIITLLPYPWLADDSTQGWKKMFYL DPDTVLPSR" misc_feature complement(6245902..>6246306) /locus_tag="PA5551" /note="Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain [Cell wall/membrane/envelope biogenesis]; Region: NlpD; COG0739" /db_xref="CDD:440502" gene complement(6246326..6247690) /gene="glmU" /locus_tag="PA5552" /db_xref="GeneID:877892" CDS complement(6246326..6247690) /gene="glmU" /locus_tag="PA5552" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="bifunctional glucosamine-1-phosphate acetyltransferase/N-acetylglucosamine-1-phosphate uridyltransferase" /protein_id="NP_254239.1" /db_xref="GeneID:877892" /translation="MSLEIVILAAGQGTRMRSALPKVLHPIAGKPMLGHVIDCARQLQ PERIHVVIGHGADLVRERMAADDLNFVLQAEQLGTGHAVAQALPFLSADQVLILYGDV PLIQLDTLQRLLAQVTPDQLSLLTVDMLDPTGYGRIVRDDQGAVQAIVEHKDATPAQR QIGEINTGILAVPGKRLADWLGRLSNDNAQGEYYLTDVIAMAVGDGLVVASAQPLDAM EVQGVNDRMQQAQLERHYQRLRAEELMRQGVTLLDPQRLDVRGEISVGRDVLIDVNVV LEGRVVIEDDVRIGPNCVIRDSVLRRGAVIKANSHLEGAELGEGSDAGPFARLRPGSV LGARAHVGNFVELKNARLGEGSKAGHLSYLGDAELGANCNIGAGTITCNYDGANKFRT ELGDDVFIGSNNSLVAPLKIGDGATTAAGSTITHEVPAKNLAFGRARQKNLENWKRPE KIKK" misc_feature complement(6246329..6247690) /gene="glmU" /locus_tag="PA5552" /note="Bifunctional protein GlmU, N-acetylglucosamine-1-phosphate- uridyltransferase/glucosamine-1-phosphate- acetyltransferase [Cell wall/membrane/envelope biogenesis]; Region: GlmU; COG1207" /db_xref="CDD:440820" gene complement(6247811..6248236) /gene="atpC" /locus_tag="PA5553" /db_xref="GeneID:878082" CDS complement(6247811..6248236) /gene="atpC" /locus_tag="PA5553" /EC_number="3.6.3.14" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP synthase subunit epsilon" /protein_id="NP_254240.1" /db_xref="GeneID:878082" /translation="MAITVHCDIVSAEAEIFSGLVEMVIAHGALGDLGIAPGHAPLIT DLKPGPIRLVKQGGEQEVYYISGGFLEVQPNMVKVLADTVVRAGDLDEAAAQEALKAA EKALQGKGAEFDYSAAAARLAEAAAQLRTVQQLRKKFGG" misc_feature complement(6247829..6248233) /gene="atpC" /locus_tag="PA5553" /note="F0F1 ATP synthase subunit epsilon; Validated; Region: atpC; PRK00571" /db_xref="CDD:234796" gene complement(6248278..6249654) /gene="atpD" /locus_tag="PA5554" /db_xref="GeneID:878083" CDS complement(6248278..6249654) /gene="atpD" /locus_tag="PA5554" /EC_number="3.6.3.14" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP synthase subunit beta" /protein_id="NP_254241.1" /db_xref="GeneID:878083" /translation="MSSGRIVQIIGAVIDVEFPRDAVPSIYEALKVQGVETTLEVQQQ LGDGVVRSIAMGSTEGLKRGLNVDSTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGE EERWGIHREAPSYADQAGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMME LIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRV ALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGV LQERITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVD PLDSTSRQLDPLVIGQDHYDTARGVQYVLQRYKELKDIIAILGMDELSEADKLLVARA RKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIAGFKGILNGDYDHLPEQAFYMVGGIEE AVEKAKKL" misc_feature complement(6248281..6249654) /gene="atpD" /locus_tag="PA5554" /note="FoF1-type ATP synthase, beta subunit [Energy production and conversion]; Region: AtpD; COG0055" /db_xref="CDD:439825" gene complement(6249685..6250545) /gene="atpG" /locus_tag="PA5555" /db_xref="GeneID:877751" CDS complement(6249685..6250545) /gene="atpG" /locus_tag="PA5555" /EC_number="3.6.3.14" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP synthase subunit gamma" /protein_id="NP_254242.1" /db_xref="GeneID:877751" /translation="MAGAKEIRSKIASIKSTQKITNAMEKVAVSKMRKAQMRMAAGRP YAERIRQVIGHLANANPEYRHPFMVEREVKRVGYIVVSSDRGLCGGLNINLFKSLVKD MSGYREQGAEIDLCVIGSKGASFFRSFGGNVVAAISHLGEEPSINDLIGSVKVMLDAY LEGRIDRLFVVSNKFVNTMTQKPTVEQLIPLVADDDQELKHHWDYLYEPDAKSLLDGL LVRYVESQVYQAVVENNACEQAARMIAMKNATDNAGELISDLQLIYNKARQAAITQEI SEIVGGAAAV" misc_feature complement(6249688..6250545) /gene="atpG" /locus_tag="PA5555" /note="F0F1 ATP synthase subunit gamma; Validated; Region: PRK05621" /db_xref="CDD:235535" misc_feature complement(order(6249697..6249714,6249718..6249720, 6249727..6249732,6249739..6249744,6249748..6249753, 6249760..6249762,6249778..6249780,6249787..6249792, 6249799..6249801,6250162..6250164,6250171..6250176, 6250183..6250188,6250276..6250287,6250291..6250293, 6250453..6250458,6250465..6250470,6250474..6250479, 6250486..6250488,6250498..6250500,6250516..6250518, 6250531..6250533)) /gene="atpG" /locus_tag="PA5555" /note="core domain interface [polypeptide binding]; other site" /db_xref="CDD:213394" misc_feature complement(order(6249883..6249885,6249892..6249897, 6249904..6249906,6250390..6250395,6250402..6250404, 6250411..6250416,6250420..6250425)) /gene="atpG" /locus_tag="PA5555" /note="delta subunit interface [polypeptide binding]; other site" /db_xref="CDD:213394" misc_feature complement(order(6249883..6249888,6249895..6249897, 6250129..6250146,6250177..6250179)) /gene="atpG" /locus_tag="PA5555" /note="epsilon subunit interface [polypeptide binding]; other site" /db_xref="CDD:213394" gene complement(6250596..6252140) /gene="atpA" /locus_tag="PA5556" /db_xref="GeneID:877752" CDS complement(6250596..6252140) /gene="atpA" /locus_tag="PA5556" /EC_number="3.6.3.14" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP synthase subunit alpha" /protein_id="NP_254243.1" /db_xref="GeneID:877752" /translation="MQQLNPSEISEIIKGRIEKLDVASQARNEGTIVSVSDGIVRIYG LADVMYGEMIEFPGGVYGMALNLEQDSVGAVVLGEYQGLAEGMNAKCTGRILEVPVGP ELLGRVVDALGNPIDGKGPIDAKATDAVEKVAPGVIWRKSVDQPVQTGYKSVDAMIPV GRGQRELIIGDRQIGKTALAVDAIINQKDSGIKCVYVAIGQKQSTIANVVRKLEENGA LANTIVVAASASESAALQYLAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISL LLRRPPGREAYPGDVFYLHSRLLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQ AGDVSAFVPTNVISITDGQIFLESAMFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSG GIRTALAQYRELAAFAQFASDLDEATRKQLEHGQRVTELMKQKQYAPMSIAEMSLSLY AAERGFLQDVEIAKVGSFEQALISYFQREHAALLAKINEKGDFNDEIDAGIKAGIEKF KATQTW" misc_feature complement(6250608..6252134) /gene="atpA" /locus_tag="PA5556" /note="F0F1 ATP synthase subunit alpha; Validated; Region: PRK09281" /db_xref="CDD:236448" gene complement(6252159..6252695) /gene="atpH" /locus_tag="PA5557" /db_xref="GeneID:878509" CDS complement(6252159..6252695) /gene="atpH" /locus_tag="PA5557" /EC_number="3.6.3.14" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP synthase subunit delta" /protein_id="NP_254244.1" /db_xref="GeneID:878509" /translation="MAELTTLARPYAKAAFEYAQAHQQLADWSAALGVLAAVSQDDTV RQLLKEPQLTSSAKAQSLIDVCGDKLNAPAQNFVRTVAENKRLELLPTIAEMYEQLKA EQEKSVEVEVTSAFTLSKEQQDKLAKALSARLSREVRLHASEDASLIGGVIIRAGDLV IDGSVRGKLAKLAEALKS" misc_feature complement(6252162..6252695) /gene="atpH" /locus_tag="PA5557" /note="F0F1 ATP synthase subunit delta; Validated; Region: PRK05758" /db_xref="CDD:235593" gene complement(6252707..6253177) /gene="atpF" /locus_tag="PA5558" /db_xref="GeneID:878510" CDS complement(6252707..6253177) /gene="atpF" /locus_tag="PA5558" /EC_number="3.6.3.14" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP synthase subunit B" /protein_id="NP_254245.1" /db_xref="GeneID:878510" /translation="MNINATLIGQSVAFFIFVLFCMKFVWPPVIAALQERQKKIADGL DAANRAARDLELAHEKAGQQLREAKAQAAEIVEQAKKRANQIVDEARDQARTEGERLK AQAQAEIEQELNSVKDALRAQVGALAVTGAEKILGASIDANAHEQLVSKLAAEI" misc_feature complement(6252710..6253177) /gene="atpF" /locus_tag="PA5558" /note="F0F1 ATP synthase subunit B; Validated; Region: PRK05759" /db_xref="CDD:180240" gene complement(6253235..6253492) /gene="atpE" /locus_tag="PA5559" /db_xref="GeneID:880088" CDS complement(6253235..6253492) /gene="atpE" /locus_tag="PA5559" /EC_number="3.6.3.14" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP synthase subunit C" /protein_id="NP_254246.1" /db_xref="GeneID:880088" /translation="METVVGLTAIAVALLIGLGALGTAIGFGLLGGKFLEGAARQPEM VPMLQVKMFIVAGLLDAVTMIGVGIALFFTFANPFVGQIAG" misc_feature complement(6253259..6253492) /gene="atpE" /locus_tag="PA5559" /note="F0F1 ATP synthase subunit C; Validated; Region: PRK06876" /db_xref="CDD:180739" gene complement(6253542..6254411) /gene="atpB" /locus_tag="PA5560" /db_xref="GeneID:880089" CDS complement(6253542..6254411) /gene="atpB" /locus_tag="PA5560" /EC_number="3.6.3.14" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP synthase subunit A" /protein_id="NP_254247.1" /db_xref="GeneID:880089" /translation="MAAETASGYIQHHLQNLTFGRLPNGDWGFAHTAEQAKEMGFWAF HVDTLGWSVLLGVVFLFIFRLAAKKATSGQPGGLQNFVEVMVEFVDTSVKDTFHGRNP LIAPLALTVFVWIFLLNLIDLVPVDYLPMLAAKITGDEHLFFRAVATTDPNATLGLSI SVFALIVFYSIKVKGIGGFLGELTLHPFSSKNIVVQILLIPVNFLLEFVTLIAKPVSL ALRLFGNMYAGELIFILIAVMFGSGMFLLSALGVALNWAWAVFHILIITLQAFIFMML TIVYLSMAHEDNH" misc_feature complement(6253545..6254300) /gene="atpB" /locus_tag="PA5560" /note="F0F1 ATP synthase subunit A; Validated; Region: PRK05815" /db_xref="CDD:235617" gene complement(6254428..6254808) /gene="atpI" /locus_tag="PA5561" /db_xref="GeneID:878128" CDS complement(6254428..6254808) /gene="atpI" /locus_tag="PA5561" /EC_number="3.6.3.14" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ATP synthase subunit I" /protein_id="NP_254248.1" /db_xref="GeneID:878128" /translation="MPSRLPAFRLLLVQLVVVLVAAISLWISWGPVAGYSGLLGGMIA WLPNCYFAYKAFRFSGARAAREIVRSFYAGEAGKLILTAVLFALAFAGVKPLMAPALF GVYLLTLMVSWCAPLLMGKTFTRP" misc_feature complement(6254437..6254808) /gene="atpI" /locus_tag="PA5561" /note="F0F1 ATP synthase subunit I; Validated; Region: PRK05760" /db_xref="CDD:180241" gene complement(6254972..6255844) /gene="spoOJ" /locus_tag="PA5562" /db_xref="GeneID:878129" CDS complement(6254972..6255844) /gene="spoOJ" /locus_tag="PA5562" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="chromosome partitioning protein" /protein_id="NP_254249.1" /db_xref="GeneID:878129" /translation="MAAKKRGLGRGLDALLGGSSPAKLQEEAVQADRRELQQIPLDLM QRGKYQPRRDMDPQALEELAQSIKAQGVMQPIVVRPIANGRYEIIAGERRWRASQQAG LEKIPALVRDVPDEAAIAMALIENIQREDLNPIEEAAALQRLQQEFQLTQQQVAEAVG KSRATITNLLRLIGLPEEIKTLLSHGDLEMGHARALLGLPAERQVEGARHVVAHGLTV RQTEALVRQWTHAPGKPAGPVKSDPDIARLEQRLAERLGASVQIRHGQKGKGQLVIRY SSLDELQGVLAHIR" misc_feature complement(6254975..6255751) /gene="spoOJ" /locus_tag="PA5562" /note="Chromosome segregation protein Spo0J, contains ParB-like nuclease domain [Cell cycle control, cell division, chromosome partitioning]; Region: Spo0J; COG1475" /db_xref="CDD:441084" gene complement(6255854..6256642) /gene="soj" /locus_tag="PA5563" /db_xref="GeneID:877777" CDS complement(6255854..6256642) /gene="soj" /locus_tag="PA5563" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="chromosome partitioning protein Soj" /protein_id="NP_254250.1" /db_xref="GeneID:877777" /translation="MAKVFAIANQKGGVGKTTTCINLAASLVATKRRVLLLDLDPQGN ATTGSGIDKHNLEHSIYDVLTGECNLAEAMQFSEHGGYQLLPANRDLTAAEVVLLEMD MKENRLRNALAPIRENYDYILIDCPPSLSMLTVNALTAADGVIIPMQCEYYALEGLTD LMNSIQRIGQLLNPTLKIEGLLRTMYDPRISLTNDVSAQLQEHFGDTLYSTVIPRNVR LAEAPSFGMPALVYDKQSRGAIAYLALAGELVRRQRAKGRAATA" misc_feature complement(6255887..6256639) /gene="soj" /locus_tag="PA5563" /note="ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ [Cell cycle control, cell division, chromosome partitioning, Cell motility]; Region: ParA; COG1192" /db_xref="CDD:440805" gene complement(6256661..6257305) /gene="gidB" /locus_tag="PA5564" /db_xref="GeneID:877778" CDS complement(6256661..6257305) /gene="gidB" /locus_tag="PA5564" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="16S rRNA methyltransferase GidB" /protein_id="NP_254251.1" /db_xref="GeneID:877778" /translation="MSAVTQHHADELARGADELGVALDADKQRQLLAYLALLIKWNKA YNLTAVRDPDEMVSRHLLDSLSIVPYAEAGDNWLDVGSGGGMPGVPLAILFPEKRLTL LDSNGKKTRFLTQVKLELKLANLEVVHSRVEAFRPESPFDGIVSRAFSSLEDFANWTR HLGGQETRWLAMKGVHPNEELAALPEDFRVEAEHALAVPGCQGQRHLLILRRTA" misc_feature complement(6256664..6257281) /gene="gidB" /locus_tag="PA5564" /note="16S rRNA G527 N7-methylase RsmG (former glucose-inhibited division protein B) [Translation, ribosomal structure and biogenesis]; Region: RsmG; COG0357" /db_xref="CDD:440126" gene complement(6257305..6259197) /gene="gidA" /locus_tag="PA5565" /db_xref="GeneID:877676" CDS complement(6257305..6259197) /gene="gidA" /locus_tag="PA5565" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="tRNA uridine 5-carboxymethylaminomethyl modification protein GidA" /protein_id="NP_254252.1" /db_xref="GeneID:877676" /translation="MDFPTRFDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQ MSCNPAIGGIGKSHLVKEIDALGGAMAEATDKGGIQFRILNSRKGPAVRATRAQADRV LYKAAIRHTLENQPNLWIFQQACDDLIVEQDQVRGVVTQMGLRFHADNVVLTTGTFLG GLIHIGLENYSGGRAGDPPSIALARRLRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQ PGDTPIPVMSFLGSKEQHPEQVSCWITHTNARTHEIIAANLDRSPMYSGVIEGIGPRY CPSIEDKIHRFADKESHQVFLEPEGLTTHELYPNGISTSLPFDVQLQIVRSIRGMENA HIVRPGYAIEYDFFDPRDLRYSLETKVIGGLFFAGQINGTTGYEEAGAQGLLAGANAA LRSQGKDSWCPRRDEAYIGVLVDDLITLGTQEPYRMFTSRAEYRLILREDNADLRLTE KGRELGLVDDRRWAAFEAKREGIEREEQRLKSTWVRPNTPQGDAIAERFGTPLTHEYN LLNLLSRPEIDYAGLVEITGNAVDNPQVAEQVEIRTKYAGYIDRQQEEISRLRASEDT RLPVDIDYLGISGLSKEIQNKLNQARPETLGQASRIPGVTPAAISLLLIHLKKRASGR QLEQSA" misc_feature complement(6257323..6259197) /gene="gidA" /locus_tag="PA5565" /note="tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA [Translation, ribosomal structure and biogenesis]; Region: MnmG; COG0445" /db_xref="CDD:440214" gene complement(6259671..6260054) /locus_tag="PA5566" /db_xref="GeneID:877677" CDS complement(6259671..6260054) /locus_tag="PA5566" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_254253.1" /db_xref="GeneID:877677" /translation="MHASQPGKRFIHKPGRDSAKRAVADPGLRRYRPGGALAFGSQGV PRRALGHYSMEIVANLAVWLGGECQVGQMIDWFGSYDRTSGLSARLLLRKPANEGSER DFQVSAKRRFERLSSSIDTLESGND" gene complement(6260390..6261757) /locus_tag="PA5567" /db_xref="GeneID:878126" CDS complement(6260390..6261757) /locus_tag="PA5567" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="tRNA modification GTPase TrmE" /protein_id="NP_254254.1" /db_xref="GeneID:878126" /translation="MQAATETIVAIATAQGRGGVGIVRVSGPLAGQMAVAVSGRQLKA RHAHYGPFLDAGGQVIDEGLSLYFPGPNSFTGEDVLELQGHGGPVVLDLLVQRCLELG ARQARPGEFSERAFLNDKLDLAQAEAIADLIEASSEQAARNALRSLQGEFSRRVHALT EQLISLRIYVEAAIDFPEEEIDFLADGHVLGLLEKVRTELSTVQREASQGALLRDGMT VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHVVDTAGLRD TEDHVEKIGVERALKAIGEADRVLLVVDATAPEAADPFSLWPEFLDQRPEPGKVTLIR NKADLSTESIGLEESADGHVTITLSARTGAGLELLREHLKACMGFEQTAESGFSARRR HLEALRLAGQALEHGHSQLIHNGAGELLAEDLRQAQQHLGEITGAFTPDDLLGRIFSS FCIGK" misc_feature complement(6260393..6261745) /locus_tag="PA5567" /note="tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE; Region: trmE; PRK05291" /db_xref="CDD:235392" misc_feature complement(6261068..6261091) /locus_tag="PA5567" /note="G1 box; other site" /db_xref="CDD:206727" misc_feature complement(order(6260675..6260683,6260744..6260746, 6260750..6260755,6261065..6261076,6261080..6261082)) /locus_tag="PA5567" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206727" misc_feature complement(6260996..6261046) /locus_tag="PA5567" /note="Switch I region; other site" /db_xref="CDD:206727" misc_feature complement(6261005..6261007) /locus_tag="PA5567" /note="G2 box; other site" /db_xref="CDD:206727" misc_feature complement(order(6260873..6260917,6260921..6260953)) /locus_tag="PA5567" /note="Switch II region; other site" /db_xref="CDD:206727" misc_feature complement(6260939..6260950) /locus_tag="PA5567" /note="G3 box; other site" /db_xref="CDD:206727" misc_feature complement(6260744..6260755) /locus_tag="PA5567" /note="G4 box; other site" /db_xref="CDD:206727" misc_feature complement(6260675..6260683) /locus_tag="PA5567" /note="G5 box; other site" /db_xref="CDD:206727" gene complement(6261828..6263564) /locus_tag="PA5568" /db_xref="GeneID:878127" CDS complement(6261828..6263564) /locus_tag="PA5568" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /codon_start=1 /transl_table=11 /product="inner membrane protein translocase subunit YidC" /protein_id="NP_254255.1" /db_xref="GeneID:878127" /translation="MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMNTTQG LPDTPSASGTSSDVPTAQSSAAGSEAADKPVAVSDKLIQVKTDVLDLAIDPRGGDIVQ LGLLQYPRRLDRPDVPFPLFDNGRERTYLAQSGLTGADGPDASSAGRPLFRSAQSSYQ LADGQNELVVDLSFSHDGVNYIKRFTFHRGLKADCSDKEKAQKKIECINENAYQVGVS YLIDNQSGKTWSGNLFAQLKRDGSADPSSTTATGVSTYLGAAVWTPDSPYKKISTKDM DKEQFKESVQGGWVAWLQHYFVTAWVPTKGEQHQVMTRKDGQGNYIVGFTGPTLSVPA GSKVETDLTLYAGPKLQKHLKELSPGLELTVDYGFLWFIAQPIFWLLQHIHSLIGNWG WSIIALTVLIKLAFFPLSAASYRSMARMRAVSPKMQAIKEQHGDDRQKMSQAMMELYK KEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPWLGWITDLSVKDPFFILPIVM GGTMLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWY ITRKIEAAAKTA" misc_feature complement(6261837..6263564) /locus_tag="PA5568" /note="membrane protein insertase; Provisional; Region: PRK01318" /db_xref="CDD:234942" gene complement(6263805..6264212) /gene="rnpA" /locus_tag="PA5569" /db_xref="GeneID:877910" CDS complement(6263805..6264212) /gene="rnpA" /locus_tag="PA5569" /EC_number="3.1.26.5" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="ribonuclease P" /protein_id="NP_254256.1" /db_xref="GeneID:877910" /translation="MVSRDFDRDKRLLTARQFSAVFDSPTGKVPGKHVLLLARENGLD HPRLGLVIGKKNVKLAVQRNRLKRLIRESFRHNQETLAGWDIVVIARKGLGELENPEL HQQFGKLWKRLLRNRPRTESPADAPGVADGTHA" misc_feature complement(6263880..6264179) /gene="rnpA" /locus_tag="PA5569" /note="RNase P protein component [Translation, ribosomal structure and biogenesis]; Region: RnpA; COG0594" /db_xref="CDD:440359" gene complement(6264227..6264361) /gene="rpmH" /locus_tag="PA5570" /db_xref="GeneID:877911" CDS complement(6264227..6264361) /gene="rpmH" /locus_tag="PA5570" /note="Product name confidence: class 2 (High similarity to functionally studied protein)" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L34" /protein_id="NP_254257.1" /db_xref="GeneID:877911" /translation="MKRTFQPSTLKRARVHGFRARMATKNGRQVLSRRRAKGRKRLTV " misc_feature complement(6264230..6264361) /gene="rpmH" /locus_tag="PA5570" /note="Ribosomal protein L34 [Translation, ribosomal structure and biogenesis]; Region: RpmH; COG0230" /db_xref="CDD:440000" CONTIG join(AE004091.2:1..6264404)