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LOCUS NP_250565 2468 aa linear CON 24-JAN-2019 ACCESSION NP_250565 VERSION NP_250565.1 DBLINK BioProject: PRJNA57945 Assembly: GCF_000006765.1 DBSOURCE REFSEQ: accession NC_002516.2 KEYWORDS RefSeq. SOURCE Pseudomonas aeruginosa PAO1 ORGANISM Pseudomonas aeruginosa PAO1 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (residues 1 to 2468) AUTHORS Winsor,G.L., Van Rossum,T., Lo,R., Khaira,B., Whiteside,M.D., Hancock,R.E. and Brinkman,F.S. TITLE Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes JOURNAL Nucleic acids Res. 37 (DATABASE ISSUE), D483-D488 (2009) PUBMED 18978025 REFERENCE 2 (residues 1 to 2468) AUTHORS Cirz,R.T., O'Neill,B.M., Hammond,J.A., Head,S.R. and Romesberg,F.E. TITLE Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin JOURNAL J. Bacteriol. 188 (20), 7101-7110 (2006) PUBMED 17015649 REFERENCE 3 (residues 1 to 2468) AUTHORS Palmer,K.L., Mashburn,L.M., Singh,P.K. and Whiteley,M. TITLE Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology JOURNAL J. Bacteriol. 187 (15), 5267-5277 (2005) PUBMED 16030221 REFERENCE 4 (residues 1 to 2468) AUTHORS Salunkhe,P., Smart,C.H., Morgan,J.A., Panagea,S., Walshaw,M.J., Hart,C.A., Geffers,R., Tummler,B. and Winstanley,C. TITLE A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance JOURNAL J. Bacteriol. 187 (14), 4908-4920 (2005) PUBMED 15995206 REFERENCE 5 (residues 1 to 2468) AUTHORS Filiatrault,M.J., Wagner,V.E., Bushnell,D., Haidaris,C.G., Iglewski,B.H. and Passador,L. TITLE Effect of anaerobiosis and nitrate on gene expression in Pseudomonas aeruginosa JOURNAL Infect. Immun. 73 (6), 3764-3772 (2005) PUBMED 15908409 REFERENCE 6 (residues 1 to 2468) AUTHORS Rasmussen,T.B., Bjarnsholt,T., Skindersoe,M.E., Hentzer,M., Kristoffersen,P., Kote,M., Nielsen,J., Eberl,L. and Givskov,M. TITLE Screening for quorum-sensing inhibitors (QSI) by use of a novel genetic system, the QSI selector JOURNAL J. Bacteriol. 187 (5), 1799-1814 (2005) PUBMED 15716452 REFERENCE 7 (residues 1 to 2468) AUTHORS Winsor,G.L., Lo,R., Sui,S.J., Ung,K.S., Huang,S., Cheng,D., Ching,W.K., Hancock,R.E. and Brinkman,F.S. TITLE Pseudomonas aeruginosa Genome Database and PseudoCap: facilitating community-based, continually updated, genome annotation JOURNAL Nucleic acids Res. 33 (DATABASE ISSUE), D338-D343 (2005) PUBMED 15608211 REFERENCE 8 (residues 1 to 2468) AUTHORS Wagner,V.E., Bushnell,D., Passador,L., Brooks,A.I. and Iglewski,B.H. TITLE Microarray analysis of Pseudomonas aeruginosa quorum-sensing regulons: effects of growth phase and environment JOURNAL J. Bacteriol. 185 (7), 2080-2095 (2003) PUBMED 12644477 REFERENCE 9 (residues 1 to 2468) AUTHORS Schuster,M., Lostroh,C.P., Ogi,T. and Greenberg,E.P. TITLE Identification, timing, and signal specificity of Pseudomonas aeruginosa quorum-controlled genes: a transcriptome analysis JOURNAL J. Bacteriol. 185 (7), 2066-2079 (2003) PUBMED 12644476 REFERENCE 10 (residues 1 to 2468) AUTHORS Stover,C.K., Pham,X.Q., Erwin,A.L., Mizoguchi,S.D., Warrener,P., Hickey,M.J., Brinkman,F.S., Hufnagle,W.O., Kowalik,D.J., Lagrou,M., Garber,R.L., Goltry,L., Tolentino,E., Westbrock-Wadman,S., Yuan,Y., Brody,L.L., Coulter,S.N., Folger,K.R., Kas,A., Larbig,K., Lim,R., Smith,K., Spencer,D., Wong,G.K., Wu,Z., Paulsen,I.T., Reizer,J., Saier,M.H., Hancock,R.E., Lory,S. and Olson,M.V. TITLE Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen JOURNAL Nature 406 (6799), 959-964 (2000) PUBMED 10984043 REFERENCE 11 (residues 1 to 2468) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (06-OCT-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 12 (residues 1 to 2468) AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (08-SEP-2010) Department of Molecular Biology and Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REMARK protein update by submitter REFERENCE 13 (residues 1 to 2468) AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (02-OCT-2008) Department of Molecular Biology and Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REMARK protein update by submitter REFERENCE 14 (residues 1 to 2468) AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (05-JUL-2006) Department of Molecular Biology and Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REMARK Sequence update by submitter REFERENCE 15 (residues 1 to 2468) AUTHORS Ung,K.S., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (04-FEB-2003) Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REFERENCE 16 (residues 1 to 2468) AUTHORS Stover,C.K., Pham,X.-Q.T., Erwin,A.L., Mizoguchi,S.D., Warrener,P., Hickey,M.J., Brinkman,F.S.L., Hufnagle,W.O., Kowalik,D.J., Lagrou,M., Garber,R.L., Goltry,L., Tolentino,E., Westbrock-Wadman,S., Yuan,Y., Brody,L.L., Coulter,S.N., Folger,K.R., Kas,A., Larbig,K., Lim,R.M., Smith,K.A., Spencer,D.H., Wong,G.K.-S., Wu,Z., Paulsen,I.T., Reizer,J., Saier,M.H., Hancock,R.E.W., Lory,S. and Olson,M.V. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (16-MAY-2000) Department of Medicine and Genetics, University of Washington Genome Center, University Of Washington, Box 352145, Seattle, WA 98195, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAG05263. Method: conceptual translation. FEATURES Location/Qualifiers source 1..2468 /organism="Pseudomonas aeruginosa PAO1" /strain="PAO1" /db_xref="taxon:208964" Protein 1..2468 /product="hypothetical protein" /calculated_mol_wt=238285 Region 20..72 /region_name="biofilm_BapA_N" /note="BapA prefix-like domain; NF033677" /db_xref="CDD:411274" Region <161..606 /region_name="Ig_like_BLP2" /note="Ig-like repeat protein Blp2; NF040520" /db_xref="CDD:468522" Region <566..1016 /region_name="Ig_like_BLP2" /note="Ig-like repeat protein Blp2; NF040520" /db_xref="CDD:468522" Region <825..1262 /region_name="Ig_like_BLP2" /note="Ig-like repeat protein Blp2; NF040520" /db_xref="CDD:468522" Region <1238..1672 /region_name="Ig_like_BLP2" /note="Ig-like repeat protein Blp2; NF040520" /db_xref="CDD:468522" Region <1484..1909 /region_name="Ig_like_BLP2" /note="Ig-like repeat protein Blp2; NF040520" /db_xref="CDD:468522" Region 1898..1980 /region_name="Big_6" /note="Bacterial Ig domain; pfam17936" /db_xref="CDD:465576" Region 2188..2439 /region_name="COG2931" /note="Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism]" /db_xref="CDD:442175" CDS 1..2468 /locus_tag="PA1874" /coded_by="NC_002516.2:2036441..2043847" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /transl_table=11 /db_xref="GeneID:882263" CONTIG join(WP_003147473.1:1..2468) ORIGIN 1 msiqakvtpi dqsissaaav evpengilkl sqssnvaldv apesvagysk sgsdlivqlk 61 tgesvrianf yaegqpssql fladkdklva vdlppvaadg plmagyipqe slagfesltg 121 agvlggmsag tallvgaaai gagvaisnss gggggggssv ppdttppkaa sglkiapdgs 181 sisgqaeaga svgidtngdg kpdltviada ngnftaplnp pltngqtvtv vvtdpagnas 241 ppaqvtapdt tapapatdvq vapdgssvtg kaepgstvgv dtdgdgqpdt tvvvgpggsf 301 evplnppltn getvtvivtd pagnnstpvt veapdttapa patdvqvapd gssvtgnaep 361 gatvgvdtdg dgqpdttvvv gpggsfevpl nppltngetv tvivtdpagn sstpvtaeap 421 dfpdapqvna sngsvlsgta eagvtivitd gngnpigqts adangnwsft pgsqlpdgtv 481 vnvvardaag nsspatsitv dgvapnapvv epsngselsg taepgssvtl tdgngnpigq 541 ttadangnws ftpstplpdg tvvnvvarda agnssppasv tvdavapatp tvdpsngttl 601 sgtaepgssv tltdgngnpi gqvtadgsgn wtftpstplp ngtvvnatat dpsgnasspa 661 svtvdavapa tpvvnpsngt tlsgtaepga tvtltdgngn pigqvtadgs gnwsftpttp 721 lpngtvvnat atdasgntsa gssvtvdsva patpvinpsn gttlsgtaep gssvtltdgn 781 gnpigqvtad gsgnwsftps tpladgtvvn atatdpagnt sgqgsttvdg vapttptvnl 841 sngsslsgta epgstviltd gngnpiaevt adgsgnwtyt pstpiangtv vnvvaqdaag 901 nsspgasvtv dsqapaapvv npsngttlsg taepgatvtl tdgngnpigq vtadgsgnws 961 ftpgtplang tvvnatasdp tgntsapast tvdsvapaap vvnpsngaei sgtaepgatv 1021 tltdgsgnpi gqvtadgsgn wsftpstpla dgtvvnatat dpagntggqg sttvdaiapa 1081 tptvnlsngs slsgtaepgs tviltdgngn piaevtadgs gnwtytpstp iangtvvnvv 1141 aqdasgnssp patvtvdssa ppapvinpsn gvvisgtaea gatvtltdag gnpigqvtad 1201 gsgnwsftpg tplangtviv atatdptgnt gpqaattvda vappapvidp sngttisgta 1261 eagakviltd gngnpigett adgsgnwsft pgtplangtv vnavaqdpag ntgpqgsttv 1321 davapntpvv npsngnllng taepgstvtl tdgngnpigq ttadgsgnws ftpgsqlpng 1381 tvvnvtasda agntslpatt tvdsslpsip qvdpsngsvi sgtadagnti iitdgngnpi 1441 gqvtadgsgn wsftpgiplp dgtvvnvvar spsnvdsapa vitvdgvapa apvidpsngt 1501 eisgtaeaga tviltdgggn pigqatadgs gnwtftpstp langtvinav aqdpagntsg 1561 pasvtvdaia ppapvinpsn gvvisgtaea gatviltdgn gnpigqvtad gsgnwsftpg 1621 tplangsvin alaqdaagnn ssptsatvds lapaapvidp sngsviagta eagatviltd 1681 gngnpigqvt adgsgnwsft pgtplsngtv vnavaqdaag ntsgpvsttv davapatpvi 1741 dpsngvelsg taepgvrvil tdgngnpigq tladgsgnws ftpgtplang tvvnavaqdp 1801 agntsgpast tvdtvapatp vinpsngsvi tgtaevgakv iltdgngnpi gettadgsgn 1861 wtftpgtpla ngtvinavae daagnasgpa sttvdsvaps apllsisadg alltgtaepn 1921 sqvrivvngd tanpitvtvd gagnfslpfa pplitgelia gvavdaagnv sgpatinapd 1981 lapptisvpe aadtwinaae igdgiqvdvt vrptmqvgqv vtvkfagqng yeaevshtlt 2041 agdiaagnlt ltltppggmg pfpegastvt adinggtast pvpftidtip patpvlslvg 2101 niltisaepg teltvtvdvg gvtatatvta dnsglaslnl ltdldidfsw dqllnaqvsv 2161 vgrdpagnps ntasigvgts ieqpvtignf gldvslnpln prfgfsgtte pdssvvirvi 2221 tpalnvellp iqadssgnfs lnllsptilt qlglnitdil nlgsqisfnl vstdsngnds 2281 aaygitltpn glslnigqid vngtsgddvl sgangssehi nggdgsdlif nvgtgdhvva 2341 gngndtiqit atdfvsidgg agfdtlvlan gidldynavg vgtlsnleri dlgkgdsgsv 2401 ltltaaevda itdanntlqi tgenndtlnv vgavntgttq lingitydvy tfgsttllie 2461 dntvqvvv