Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NP_249381 4180 aa linear CON 24-JAN-2019 ACCESSION NP_249381 VERSION NP_249381.1 DBLINK BioProject: PRJNA57945 Assembly: GCF_000006765.1 DBSOURCE REFSEQ: accession NC_002516.2 KEYWORDS RefSeq. SOURCE Pseudomonas aeruginosa PAO1 ORGANISM Pseudomonas aeruginosa PAO1 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (residues 1 to 4180) AUTHORS Winsor,G.L., Van Rossum,T., Lo,R., Khaira,B., Whiteside,M.D., Hancock,R.E. and Brinkman,F.S. TITLE Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes JOURNAL Nucleic acids Res. 37 (DATABASE ISSUE), D483-D488 (2009) PUBMED 18978025 REFERENCE 2 (residues 1 to 4180) AUTHORS Cirz,R.T., O'Neill,B.M., Hammond,J.A., Head,S.R. and Romesberg,F.E. TITLE Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin JOURNAL J. Bacteriol. 188 (20), 7101-7110 (2006) PUBMED 17015649 REFERENCE 3 (residues 1 to 4180) AUTHORS Palmer,K.L., Mashburn,L.M., Singh,P.K. and Whiteley,M. TITLE Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology JOURNAL J. Bacteriol. 187 (15), 5267-5277 (2005) PUBMED 16030221 REFERENCE 4 (residues 1 to 4180) AUTHORS Salunkhe,P., Smart,C.H., Morgan,J.A., Panagea,S., Walshaw,M.J., Hart,C.A., Geffers,R., Tummler,B. and Winstanley,C. TITLE A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance JOURNAL J. Bacteriol. 187 (14), 4908-4920 (2005) PUBMED 15995206 REFERENCE 5 (residues 1 to 4180) AUTHORS Filiatrault,M.J., Wagner,V.E., Bushnell,D., Haidaris,C.G., Iglewski,B.H. and Passador,L. TITLE Effect of anaerobiosis and nitrate on gene expression in Pseudomonas aeruginosa JOURNAL Infect. Immun. 73 (6), 3764-3772 (2005) PUBMED 15908409 REFERENCE 6 (residues 1 to 4180) AUTHORS Rasmussen,T.B., Bjarnsholt,T., Skindersoe,M.E., Hentzer,M., Kristoffersen,P., Kote,M., Nielsen,J., Eberl,L. and Givskov,M. TITLE Screening for quorum-sensing inhibitors (QSI) by use of a novel genetic system, the QSI selector JOURNAL J. Bacteriol. 187 (5), 1799-1814 (2005) PUBMED 15716452 REFERENCE 7 (residues 1 to 4180) AUTHORS Winsor,G.L., Lo,R., Sui,S.J., Ung,K.S., Huang,S., Cheng,D., Ching,W.K., Hancock,R.E. and Brinkman,F.S. TITLE Pseudomonas aeruginosa Genome Database and PseudoCap: facilitating community-based, continually updated, genome annotation JOURNAL Nucleic acids Res. 33 (DATABASE ISSUE), D338-D343 (2005) PUBMED 15608211 REFERENCE 8 (residues 1 to 4180) AUTHORS Wagner,V.E., Bushnell,D., Passador,L., Brooks,A.I. and Iglewski,B.H. TITLE Microarray analysis of Pseudomonas aeruginosa quorum-sensing regulons: effects of growth phase and environment JOURNAL J. Bacteriol. 185 (7), 2080-2095 (2003) PUBMED 12644477 REFERENCE 9 (residues 1 to 4180) AUTHORS Schuster,M., Lostroh,C.P., Ogi,T. and Greenberg,E.P. TITLE Identification, timing, and signal specificity of Pseudomonas aeruginosa quorum-controlled genes: a transcriptome analysis JOURNAL J. Bacteriol. 185 (7), 2066-2079 (2003) PUBMED 12644476 REFERENCE 10 (residues 1 to 4180) AUTHORS Stover,C.K., Pham,X.Q., Erwin,A.L., Mizoguchi,S.D., Warrener,P., Hickey,M.J., Brinkman,F.S., Hufnagle,W.O., Kowalik,D.J., Lagrou,M., Garber,R.L., Goltry,L., Tolentino,E., Westbrock-Wadman,S., Yuan,Y., Brody,L.L., Coulter,S.N., Folger,K.R., Kas,A., Larbig,K., Lim,R., Smith,K., Spencer,D., Wong,G.K., Wu,Z., Paulsen,I.T., Reizer,J., Saier,M.H., Hancock,R.E., Lory,S. and Olson,M.V. TITLE Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen JOURNAL Nature 406 (6799), 959-964 (2000) PUBMED 10984043 REFERENCE 11 (residues 1 to 4180) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (06-OCT-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 12 (residues 1 to 4180) AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (08-SEP-2010) Department of Molecular Biology and Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REMARK protein update by submitter REFERENCE 13 (residues 1 to 4180) AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (02-OCT-2008) Department of Molecular Biology and Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REMARK protein update by submitter REFERENCE 14 (residues 1 to 4180) AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (05-JUL-2006) Department of Molecular Biology and Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REMARK Sequence update by submitter REFERENCE 15 (residues 1 to 4180) AUTHORS Ung,K.S., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (04-FEB-2003) Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REFERENCE 16 (residues 1 to 4180) AUTHORS Stover,C.K., Pham,X.-Q.T., Erwin,A.L., Mizoguchi,S.D., Warrener,P., Hickey,M.J., Brinkman,F.S.L., Hufnagle,W.O., Kowalik,D.J., Lagrou,M., Garber,R.L., Goltry,L., Tolentino,E., Westbrock-Wadman,S., Yuan,Y., Brody,L.L., Coulter,S.N., Folger,K.R., Kas,A., Larbig,K., Lim,R.M., Smith,K.A., Spencer,D.H., Wong,G.K.-S., Wu,Z., Paulsen,I.T., Reizer,J., Saier,M.H., Hancock,R.E.W., Lory,S. and Olson,M.V. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (16-MAY-2000) Department of Medicine and Genetics, University of Washington Genome Center, University Of Washington, Box 352145, Seattle, WA 98195, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAG04079. Method: conceptual translation. FEATURES Location/Qualifiers source 1..4180 /organism="Pseudomonas aeruginosa PAO1" /strain="PAO1" /db_xref="taxon:208964" Protein 1..4180 /product="hypothetical protein" /calculated_mol_wt=429891 Region 135..378 /region_name="TPS" /note="TPS secretion domain; pfam05860" /db_xref="CDD:461762" Region <702..1219 /region_name="PksD" /note="Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]; COG3321" /db_xref="CDD:442550" Region <1029..1538 /region_name="PksD" /note="Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]; COG3321" /db_xref="CDD:442550" Region 3971..4080 /region_name="DUF3739" /note="Filamentous haemagglutinin family outer membrane protein; pfam12545" /db_xref="CDD:432625" CDS 1..4180 /locus_tag="PA0690" /coded_by="NC_002516.2:749957..762499" /note="'Product name confidence: class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences)'" /transl_table=11 /db_xref="GeneID:880803" CONTIG join(WP_003147216.1:1..4180) ORIGIN 1 mpsrspssar ssralyaprl kplaqaiall lvaggaqaag qpfsaawfaa kgaaqggaag 61 aprpgaqlpg appplaqqqr vnqqlqrsma nlnntvaaia aqqaaqaagr qaalnlpqdv 121 pdglgegglk vdaslpfeqa wqnakgpvqt qaagkttvsi eqtadkavln wetfnvgrnt 181 tvdfqqhadw allnrvndps arpsqiqgqi kadgtvmlvn rngvvfsgss qvdvrnltva 241 aanisdeqfr qrglyydnag srptftdaag avrveqgaql rtaapsgstr gggyvlllgs 301 evdnagsivt pkgqtvlsag dsfvirrgqg tdgnltsttr gnevlpgfaa dssagrvrns 361 glvqaatgdi slsgreveqa gvllssssvd srgtlhlkas eritlaegat sailvdssgs 421 aaldsqreal lkplngssaa vsrgdddrrd lsrveidsag svdfrdgsit lasggqvavn 481 agqrallrdg avidvsgaqg vqvametnsi kvnvrgneqr dasvnreggg lnsqdvwvdv 541 rdlvrvpagt ngyasdrwyt aggllevggy lgtqghsage wmaqggivsf tgndvvtqag 601 sqinlsggtl dvqggyirqt wlkgsdgrly elgsapgdll ydgiyrgyea hserwdqtry 661 fynpliaptq ryengysvgr dagslvigsa narldgqvvg dtyrgerqte apqagldgyn 721 qsqnavarga qlvvgrytpy yvkssglley algadagslk qvvigtgeva aeeptldapv 781 aaerqgrlsl dsellngfql gglkvaages irvdsaltla nggeailfan dvaidadita 841 hggslqagnv laqispngti dgfvdagrea gilrvgdgvr ldasglwsnl llapedndtl 901 ayrdggrisl rsggdlslgq gslldvssga alladgkrlg grggdialha saglaqasdg 961 qlqlggtlng lgtsgagtls lqsgkvrigg ddlgdgslql aedffqqgfa syrvvgrsgl 1021 tvaedaqvrv arpvyrfasg agevaageap realeawipp lyledalagr lvqregadly 1081 lqaggdgnil gqldpasqtl elgrgslvev dpgraivlrg pgqitldgil nawggridvr 1141 qqqfgaldvt qdnqpkaqgq pharsiwige qalldvagra vtaldgrgrr ygevqsggsi 1201 viggeidpgk aiatsadafv ivrpgarlea sgsqaqldvp glgrvllagd ggrialssyn 1261 glyldgslra aaggsgaagg sleiiadapl yqgftvvddr vlamrelilt aghadsglpt 1321 llqpgmddsa lrygqsrvgt qsltgggfdq lslfsngpls fegnidlamg rslnlyagti 1381 aatgggpsev klqapyvrls gigmygqqas gefrprltyg ptataeqvrl qvsagrlldi 1441 agrlsfgsdg vingvnaeav ryqrpgfekv tlrsegdlrf agdypengdp sgrlithgdl 1501 qltaaqlypv tgasstlyag ygldeggqav fdaerhlaie rsgeslpdtp lsvfgslafm 1561 asnieqggvv raplgliqfg snldrapgtv rllpgsltsv sgaelvmpyg gttdginylv 1621 nqvpiqltga ggalaagtlv agvglyasev dvqqgarldl sgggelagag fisgrggstd 1681 arfhplvqqd ndgfrlpels snpvyaivpg hqavsaplgg eagaiqplvg qqvtigdgvp 1741 glaagtytll pstyallpga frveinglag qgapmatqgl rngswatsgq lsiagtsird 1801 slsrqvilss adtlrrysqy nemsyadfir adaarknipr amlpvdarsl ylglradeel 1861 renalsfegk vdftpeesgy ggslivdaea gieilpeggl pdsdfagvsl vaddlnaiga 1921 sriaigtlpy veygeqgnfv qfggsnrlfp vvlrkgahls apeviigrdi tleggsgist 1981 lgkgktayds sdgfiyqpgg rnllllsngw lnllapaads slpvrlggca egagcadtel 2041 ysegtlgiat ngtvtfgdnv rygtrnlsla lstinigssq sladaaargv lpnglaldqt 2101 vlqrllrger gagipalenl ilsardavni ygsvsldtyd patgksslan lvlgtpaiyg 2161 hgtgedvasi rtaslvwsgs sqpaaapvag gagsgsgtlr vdaeritlgy gantqpaget 2221 dearlalgfa evqlnaseri sanhkgslrv yqrldgyvag eglrysggdl rlstplltge 2281 agslsrissg gslslaapag aaavtfdsgt aglgaelsls areirldsav slpsgklsls 2341 aeddlelgdg aridlagrka sfndvdkysw ggdlllssra gdirqaagsl idlsarnnrg 2401 gtlsavalae dagvvdlqgr ilggasgdyd aggtrvpflg geleiraqrl gdggslseqf 2461 talnqrlnqg evfgarrfql kqgdlqigdg lkahrievsl dngqlgvsgt vdasgaqvge 2521 irlaggrgls lggnalldah gsllrrdsyg qiidspnram velssgsgtl vlaggaridl 2581 rhgtaapaeq vdgvargtle lnaprlggvs agdiaidasg aldirgagsi alnamqrydd 2641 apwgndpaag grsyqvidqa yldarhaess afiaaalanr elldgklagl tnatyadafh 2701 lrpgveivsa tadgdlvvqg dldlsgyrya slnpntplte vygsgevgal vlraggdlnl 2761 ygsindgfap ppdspddkgw iltpgvqpfg gdlvvpgpgv vlgdgtaflg grtlnydlpi 2821 kgttlaagtr lateavleqp ytlaagsvlv adihdaagtl lyaagsllrd gvtlevgsrl 2881 gagtllaapa svqamtwpag vplpsilreg psrpnvllln gelalargsl ipsqtevvla 2941 gdapfielrp sdgvrqgrnw alaemlpags qswsmrlvag adlaaadnrl vrpdssasln 3001 ladthyqaki eqssgglvft dqatdwgitp gtpvdesnew icglgpycae pprwtwapgn 3061 ylgmpagtai gegdlwwcsv dpslcienlg ktvvtpqnql fsvlrtgtgd ldlasagnlt 3121 qwspygvyta gtqaadvatg fnqprglfng svlgaggady evlstsqyqa wypehggnld 3181 iavggdvvgd qwaekltssd pirplppsaa vgnwlwrqgs adregvptaw wvnfgsyvrg 3241 aegdapylvg ftgfgtlggg nlsmrtggda gniaprgdgs ipssgnlnpr sqglvlavag 3301 tgrltsdgal qlggggdlnv riggevnpsr earatqtyss sgfdglysgg tihdlqgali 3361 nlrgsaslys galggidpry dtllrdpaev rsrdafsptl asstggltlv agdtgmrlet 3421 rgdlvlggvt dpgrvgvpnt vgftapdgsv yqgggiawfs lwtahtsidl faaggnltps 3481 tqlveatnai pmagrnlsps dgrfiypsiv raaapegsiy lgpssgdmgg vslnvsttpy 3541 slllapslng elellagdsi yaggysvqrs gadpanlpsi wtpafagysd aallnpiagn 3601 gspdgnpavi gglplfyfgp dsaaslardl qparfyaltg divglnsgaq irfgeqagnr 3661 agqtwyegag pvwmragrdi vasgtplgqr isapsqistd asftgnlfvh ddpndlslvq 3721 agrdilygnf nvagpgtlei sagrnilmed raaitslgav vpgdsrpgad ivlqagaaga 3781 dyqafleryl dpanlaqagt plaeqpgkvv rtyeselakw lnerfgfagd aeqaqaffag 3841 lpaeqqrifa rqvyfaelra ggreynevgg vrqgsylrgr naiaalfper dpagnpisye 3901 gdivmyggag vhtdfggdiq llspggrqvf giegeappst agivtqgqgd iqaysrdsil 3961 lgqsrimttf ggsilawsae gdinagrgsq ttvvytpprr iydawgnvsl spqvpstgag 4021 iatlnpipev apgdidliap lgtidageag irvsgnvnva alqvvnaani qtqgqssgip 4081 lvasvntgal tsasaaassa tqaaedvsrq qqaaarqrmp svitvqvlgf gnerlepsrd 4141 gasrspgynp dsavqvlgag algeqarsql tdeergnlil