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LOCUS NC_003210 2944528 bp DNA circular CON 28-AUG-2016 ACCESSION NC_003210 VERSION NC_003210.1 DBLINK BioProject: PRJNA61583 Assembly: GCF_000196035.1 KEYWORDS RefSeq. SOURCE Listeria monocytogenes EGD-e ORGANISM Listeria monocytogenes EGD-e Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria. REFERENCE 1 (bases 1 to 2944528) AUTHORS Toledo-Arana,A., Dussurget,O., Nikitas,G., Sesto,N., Guet-Revillet,H., Balestrino,D., Loh,E., Gripenland,J., Tiensuu,T., Vaitkevicius,K., Barthelemy,M., Vergassola,M., Nahori,M.A., Soubigou,G., Regnault,B., Coppee,J.Y., Lecuit,M., Johansson,J. and Cossart,P. TITLE The Listeria transcriptional landscape from saprophytism to virulence JOURNAL Nature 459 (7249), 950-956 (2009) PUBMED 19448609 REFERENCE 2 (bases 1 to 2944528) AUTHORS Chatterjee,S.S., Hossain,H., Otten,S., Kuenne,C., Kuchmina,K., Machata,S., Domann,E., Chakraborty,T. and Hain,T. TITLE Intracellular gene expression profile of Listeria monocytogenes JOURNAL Infect. Immun. 74 (2), 1323-1338 (2006) PUBMED 16428782 REFERENCE 3 (bases 1 to 2944528) AUTHORS Glaser,P., Frangeul,L., Buchrieser,C., Amend,A., Baquero,F., Berche,P., Bloecker,H., Brandt,P., Chakraborty,T., Charbit,A., Chetouani,F., Couve,E., de Daruvar,A., Dehoux,P., Domann,E., Dominguez-Bernal,G., Duchaud,E., Durand,L., Dussurget,O., Entian,K.-D., Fsihi,H., Garcia-Del Portillo,F., Garrido,P., Gautier,L., Goebel,W., Gomez-Lopez,N., Hain,T., Hauf,J., Jackson,D., Jones,L.-M., Karst,U., Kreft,J., Kuhn,M., Kunst,F., Kurapkat,G., Madueno,E., Maitournam,A., Mata Vicente,J., Ng,E., Nordsiek,G., Novella,S., de Pablos,B., Perez-Diaz,J.-C., Remmel,B., Rose,M., Rusniok,C., Schlueter,T., Simoes,N., Tierrez,A., Vazquez-Boland,J.-A., Voss,H., Wehland,J. and Cossart,P. TITLE Comparative genomics of Listeria species JOURNAL Science 294 (5543), 849-852 (2001) PUBMED 11679669 REFERENCE 4 (bases 1 to 2944528) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-NOV-2001) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2944528) AUTHORS Glaser,P., Frangeul,L. and Rusniok,C. TITLE Direct Submission JOURNAL Submitted (06-JUN-2001) Glaser P., Institut Pasteur, Genomique des Microorganismes Pathogenes, 25 rue du Docteur Roux, 75724 Paris Cedex 15, FRANCE COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AL591824. RefSeq Category: Reference Genome FGS: First Genome sequenced MOD: Model Organism UPR: UniProt Genome COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..2944528 /organism="Listeria monocytogenes EGD-e" /mol_type="genomic DNA" /strain="EGD-e" /db_xref="taxon:169963" regulatory 305..310 /regulatory_class="ribosome_binding_site" operon 318..3012 /operon="Operon_001" /experiment="EXISTENCE:[PMID:19448609]" gene 318..1673 /gene="dnaA" /locus_tag="lmo0001" /operon="Operon_001" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984365" CDS 318..1673 /gene="dnaA" /locus_tag="lmo0001" /operon="Operon_001" /experiment="EXISTENCE:[PMID:19448609]" /note="binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself." /codon_start=1 /transl_table=11 /product="chromosome replication initiator DnaA" /protein_id="NP_463534.1" /db_xref="GeneID:984365" /translation="MQSIEDIWQETLQIVKKNMSKPSYDTWMKSTTAHSLEGNTFIIS APNNFVRDWLEKSYTQFIANILQEITGRLFDVRFIDGEQEENFEYTVIKPNPALDEDG IEIGKHMLNPRYVFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLM HAVGHYVQQHKDNAKVMYLSSEKFTNEFISSIRDNKTEEFRTKYRNVDVLLIDDIQFL AGKEGTQEEFFHTFNTLYDEQKQIIISSDRPPKEIPTLEDRLRSRFEWGLITDITPPD LETRIAILRKKAKADGLDIPNEVMLYIANQIDSNIRELEGALIRVVAYSSLVNKDITA GLAAEALKDIIPSSKSQVITISGIQEAVGEYFHVRLEDFKAKKRTKSIAFPRQIAMYL SRELTDASLPKIGDEFGGRDHTTVIHAHEKISQLLKTDQVLKNDLAEIEKNLRKAQNM F" misc_feature 339..1649 /gene="dnaA" /locus_tag="lmo0001" /note="chromosomal replication initiator protein DnaA; Region: DnaA; TIGR00362" /db_xref="CDD:273037" regulatory 1856..1860 /regulatory_class="ribosome_binding_site" /operon="Operon_001" gene 1867..3012 /gene="dnaN" /locus_tag="lmo0002" /operon="Operon_001" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984379" CDS 1867..3012 /gene="dnaN" /locus_tag="lmo0002" /operon="Operon_001" /EC_number="2.7.7.7" /experiment="EXISTENCE:[PMID:19448609]" /note="binds the polymerase to DNA and acts as a sliding clamp" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit beta" /protein_id="NP_463535.1" /db_xref="GeneID:984379" /translation="MKFVIERDRLVQAVNEVTRAISARTTIPILTGIKIVVNDEGVTL TGSDSDISIEAFIPLIENDEVIVEVESFGGIVLQSKYFGDIVRRLPEENVEIEVTSNY QTNISSGQASFTLNGLDPMEYPKLPEVTDGKTIKIPINVLKNIVRQTVFAVSAIEVRP VLTGVNWIIKENKLSAVATDSHRLALREIPLETDIDEEYNIVIPGKSLSELNKLLDDA SESIEMTLANNQILFKLKDLLFYSRLLEGSYPDTSRLIPTDTKSELVINSKAFLQAID RASLLARENRNNVIKLMTLENGQVEVSSNSPEVGNVSENVFSQSFTGEEIKISFNGKY MMDALRAFEGDDIQISFSGTMRPFVLRPKDAANPNEILQLITPVRTY" misc_feature 1867..3006 /gene="dnaN" /locus_tag="lmo0002" /note="DNA polymerase III sliding clamp (beta) subunit, PCNA homolog [Replication, recombination and repair]; Region: DnaN; COG0592" /db_xref="CDD:440357" regulatory 3030..3062 /regulatory_class="terminator" regulatory 3104..3109 /regulatory_class="ribosome_binding_site" gene 3121..4464 /locus_tag="lmo0003" /db_xref="GeneID:984420" CDS 3121..4464 /locus_tag="lmo0003" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463536.1" /db_xref="GeneID:984420" /translation="MMKDMTTGNPTKLIFLFAMPMLIGNLFQQFYTMIDAVIVGKFVS VDALAAVGATNSVNFFMISLIIGLMSGISVVVAQYFGFKDYDRLKDVIATATYAVVFS AIILTVAGVLLAKPLLILLRTPANILDDSTIFLTTLFIGILPMSLYNGMAAILRALGN SITPLIFLILSSLMNIALDFLFVVYMDMGVRGAAIATVLSQTAAAIAVIYYAYRHVPF MRIERAKFKLSTPLLKEMVRIGLPSGLQGSFISIGNMALQSLINGFGSSVVAAYTAAS RIDSLTYQPGIAFGAASSMFAGQNIGAGKIDRVREGFWSGIKVVTAISIGITILVQLF ARQFLLLFVDSSETEVINIGVSYLLIVSLFYVVVGILFVVRETLRGTGDAMVPLAMGI FELVSRLVIGFVLSLYIGYVGLWWATPVAWITATILGVWRYKSGAWQKKAVIRRK" misc_feature 3151..4437 /locus_tag="lmo0003" /note="Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA; Region: MATE_yoeA_like; cd13138" /db_xref="CDD:240543" regulatory 4631..4637 /regulatory_class="ribosome_binding_site" gene 4644..4865 /locus_tag="lmo0004" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984453" CDS 4644..4865 /locus_tag="lmo0004" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463537.1" /db_xref="GeneID:984453" /translation="MAETVKINSEFVTLGQLLQMIDVVSTGGMAKAYLSENTIYINGE QDNRRGKKLRNGDVILVPGVGKVKIEQGK" misc_feature 4653..4829 /locus_tag="lmo0004" /note="S4 domain protein YaaA; Region: YaaA_near_RecF; TIGR02988" /db_xref="CDD:274378" regulatory 4856..4861 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0004" gene 4869..5981 /gene="recF" /locus_tag="lmo0005" /db_xref="GeneID:984623" CDS 4869..5981 /gene="recF" /locus_tag="lmo0005" /experiment="EXISTENCE:[PMID:19448609]" /note="Required for DNA replication; binds preferentially to single-stranded, linear DNA" /codon_start=1 /transl_table=11 /product="recombination protein F" /protein_id="NP_463538.1" /db_xref="GeneID:984623" /translation="MHLESIVLRNFRNYENLELEFSPSVNVFLGENAQGKTNLLEAVL MLALAKSHRTTNDKDFIMWEKEEAKMEGRIAKHGQSVPLELAITQKGKRAKVNHLEQK KLSQYVGNLNVVIFAPEDLSLVKGAPGIRRRFLNMEIGQMQPIYLHNLSEYQRILQQR NQYLKMLQMKRKVDPILLDILTEQFADVAINLTKRRADFIQKLEAYAAPIHHQISRGL ETLKIEYKASITLNGDDPEVWKADLLQKMESIKQREIDRGVTLIGPHRDDSLFYINGQ NVQDFGSQGQQRTTALSIKLAEIDLIHEETGEYPVLLLDDVLSELDDYRQSHLLGAIE GKVQTFVTTTSTSGIDHETLKQATTFYVEKGTVKKS" misc_feature 4869..5969 /gene="recF" /locus_tag="lmo0005" /note="recombination protein F; Reviewed; Region: recF; PRK00064" /db_xref="CDD:234608" regulatory 6017..6021 /regulatory_class="ribosome_binding_site" gene 6030..7970 /gene="gyrB" /locus_tag="lmo0006" /db_xref="GeneID:984708" CDS 6030..7970 /gene="gyrB" /locus_tag="lmo0006" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit B" /protein_id="NP_463539.1" /db_xref="GeneID:984708" /translation="MSEENITNVQENASDYNEDQIQVLEGLEAVRKRPGMYIGSTSQR GLHHLVWEIVDNAIDEALAGFCTEIEITIEADNSITVRDNGRGIPTGINEKIGRPTVE VIFTVLHAGGKFGGGGYKVSGGLHGVGASVVNALSTSLEVYVHREGQKYYQRFERGDV VMDMEEQGETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNRGLTISIEDK REEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEISMQYNTGFSS NIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKLFKDSDDNLSGEDVREGLTAI ISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEKGVVASR ARLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQGRDR LFQAILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGGDFDVSKSRYHKLIIMT DADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQIEYVYSDGQLEDY LASLDGDTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMG DRVEPRRKFIEDNAQYVKNLDV" misc_feature 6057..7967 /gene="gyrB" /locus_tag="lmo0006" /note="DNA gyrase subunit B; Validated; Region: gyrB; PRK05644" /db_xref="CDD:235542" regulatory 8048..8053 /regulatory_class="ribosome_binding_site" gene 8065..10593 /gene="gyrA" /locus_tag="lmo0007" /db_xref="GeneID:984791" CDS 8065..10593 /gene="gyrA" /locus_tag="lmo0007" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit A" /protein_id="NP_463540.1" /db_xref="GeneID:984791" /translation="MAETPNQRITEINLNKEMRTSFLDYAMSVIVARALPDVRDGLKP VHRRILYAMNDLGMTSDKAYKKSARIVGEVIGKYHPHGDTAVYFTMVRMAQDFSYRNM LVDGHGNFGSVDGDMAAAMRYTEARMSKISMELLRDINKDTIDYADNYDGSEREPVIL PARFPNLLVNGSSGIAVGMATNIPTHHLGEVIDGVLALSHDPEITIRDLMEYIPGPDF PTAGMIMGRSGIRRAYESGRGSITVRGRVDIEEKKNGKETIVITEIPYQVNKARLVER IAELAREKKIDGITSLNDESDRSGMRIVIEVRRDISASVIVNNLFKMTALQTTFGINM LALVDNHPKVLNLKEILYYYLEHQKVVIRRRTEFELRKAEARAHILEGLRIALDNIDA IIKLIRGSKTSDVAKEGLMTQFNLSDKQAQAILDMRLQRLTGLEREKIEEEYQNLVAL INDLKAILADDERILEIIREELEEIKVKYADKRRTEILAGDLVSLEDEDLIPEEEVAI TLTKRGYIKRLPLSTYRSQRRGGRGIQGMSTHEDDFVEHLVATSTHDTLLFFTNTGKV YRSKGYEVPEYGRTAKGIPIINLLGIESQEQVNAVINLSEFTDDSYLFFTTKHGVVKR TTLSQFAKIRQSGLRAVELRENDELISVQMTDGSKNMIIATKHGQSIYFPEENIRVMG RTAAGVRGIRLREDDEVIGMEVLEDDEKVLVVTEKGYGKQTPASQYPLRNRGGMGVKT VTITEKNGNLVAMKTVTGEEDLMLMTVSGVLIRFEIDTVSQTGRSAMGVKLIRLDEDE KVATVAKVPKEEDEVELEEEIDETLITQVPDESFEDAPGSDIEE" misc_feature 8077..10488 /gene="gyrA" /locus_tag="lmo0007" /note="DNA gyrase subunit A; Validated; Region: PRK05560" /db_xref="CDD:235502" misc_feature 9577..9720 /gene="gyrA" /locus_tag="lmo0007" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature 9727..9879 /gene="gyrA" /locus_tag="lmo0007" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature 9895..10029 /gene="gyrA" /locus_tag="lmo0007" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature 10039..10182 /gene="gyrA" /locus_tag="lmo0007" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature 10189..10335 /gene="gyrA" /locus_tag="lmo0007" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature 10342..10485 /gene="gyrA" /locus_tag="lmo0007" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" regulatory 10600..10653 /regulatory_class="terminator" regulatory 10712..10717 /regulatory_class="ribosome_binding_site" gene 10728..12242 /locus_tag="lmo0008" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984834" CDS 10728..12242 /locus_tag="lmo0008" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cardiolipin synthase" /protein_id="NP_463541.1" /db_xref="GeneID:984834" /translation="MRKLIQFLFIAVVLFLVEYVLINQAAILFLVTSGIIQLCGVIIA IRLLLFDQRNTSSKVAWVAVIFILPVLGTISYLVFGRNPATRKFSTAQVKEKTKLINA IHAIPNNTNEKLPRLSKRIAHLTSIEPIKGNKIEILTNGEETFPVLLDALRKAENHIH IQYYIFKTDAISTEIRDILVEKAKSGVEVRFMFDGLGSSKLGKAFLAPLKEAGVSIHA FDPIASPWIVRTANLRNHRKIVVIDGQIGFTGGLNIGEEYRSNTPDFRVWRDTHIKIT GQAVIELQESFLNDWVYMENQAGAADGFISESGSKQYFSPVDMGDEWAQVIYGGPYDK EKWVRDSMLDLIDSAKESVWIVSPYFVPDEESLAVIRRVAMSGVDVRVIIPGKGDRGI SFHGSNAYVKTMIEAGAKMYAYADDSFVHAKAMLVDGTRAAIGTANFDVRSFRLNHEL MVFLYDESEAMHHLKRDFKKDFEDSRLFTMKDMENKPLLTRIKEVLSSLLSPIL" misc_feature 10728..12239 /locus_tag="lmo0008" /note="cardiolipin synthase; Region: PRK12452" /db_xref="CDD:171510" regulatory 12246..12251 /regulatory_class="ribosome_binding_site" gene 12258..12776 /locus_tag="lmo0009" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984861" CDS 12258..12776 /locus_tag="lmo0009" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="spermidine acetyltransferase" /protein_id="NP_463542.1" /db_xref="GeneID:984861" /translation="MSGDLKLRPLEREDLKFVHRLNNDAKIMSYWFEEPYEAFVELQE LYDKHIHDQSERRFILELDGQMVGLVELMEIDYIHRRAEFQIIIDPKFQGHGYAVSAT KLAMKYAFHVLNMHKLYLVVDKVNEKAIHVYEKVGFIREGELIDEFFVDGTYHDAIRM CIFQHQYREMDI" misc_feature 12267..12767 /locus_tag="lmo0009" /note="NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, from bacterial antibiotic resistance to circadian rhythms in mammals. Members...; Region: N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate; cl17182" /db_xref="CDD:473072" misc_feature order(12513..12521,12549..12554) /locus_tag="lmo0009" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" regulatory 12904..12909 /regulatory_class="ribosome_binding_site" gene 12918..13886 /locus_tag="lmo0010" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984924" CDS 12918..13886 /locus_tag="lmo0010" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="mevalonate kinase" /protein_id="NP_463543.1" /db_xref="GeneID:984924" /translation="MATGIGTAKMILCGEHAVVYGEPAISVPFTQAVVTTNVETSIKT KFSSAFFSGDLDDMPDFLAGIKALVVDVLNEIGNGECVSIHVVSGVPIGRGLGSSAAV ATSIARGLYKYFNQELDSKKLLAIVNAAEKIAHGNASGVDAITVVSEKPVWYERDRKL EIMHFPKKITFVVADTGVPSETRDAVKDVQVLYKENQVEIGKIIHQLGDISREIKTHL EGDADTVKIGAAMNKAQSYLETLTVSDSSLEKLIKVARSNGADGAKLTGGGRGGCIIA VAKNQEIAEQITKALHNAGAAQEWIFTIGEGSYESDSHRTHECGAN" misc_feature 12939..13751 /locus_tag="lmo0010" /note="Mevalonate kinase [Lipid transport and metabolism]; Region: ERG12; COG1577" /db_xref="CDD:441185" regulatory 13832..13837 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0010" gene 13843..14814 /locus_tag="lmo0011" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984930" CDS 13843..14814 /locus_tag="lmo0011" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="mevalonate diphosphate decarboxylase" /protein_id="NP_463544.1" /db_xref="GeneID:984930" /translation="MKATAIAHTNVALIKYWGKRDEHLILPANSSLSFTVDKFYTKTT VEWDEKLTQDTFILNNEQKTDAKVARFIDKMREEFGISAKAKITSENHVPTAAGLASS ASAFAALALAGSNAAGRKDTKEYISRLARFGSGSASRSVFGDFVIWEKGELADGSDSF AVPFTNKLCDKMSLVVAVVSDKEKKVSSRDGMRLTVETSPFFENWVSAAEIDLEEMKQ AILDEDFIKVGEITERNGMKMHATTLGAEPPFTYFQPQSLEIMDAVRELRENGIPAYF TMDAGPNVKVICERANENIVAEKLSGLAKNVLICHAGKEASVVSDEK" misc_feature 13843..14796 /locus_tag="lmo0011" /note="Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism]; Region: MVD1; COG3407" /db_xref="CDD:442633" regulatory 14783..14788 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0011" gene 14795..15874 /locus_tag="lmo0012" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984932" CDS 14795..15874 /locus_tag="lmo0012" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="mevalonate kinase" /protein_id="NP_463545.1" /db_xref="GeneID:984932" /translation="MYQMKNKLQVKIPGKLYVAGEYAVVESGHTAILTAVNRYITLTL EDSERNELWIPHYENPVSWPVGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKM IIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNG SCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVPTFSV GWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSAIK ENRRILQELGTKAGVNIETSLLKELADSAENMGGAGKSSGSGGGDCGIAFSKTKELAE KLVNEWEKLGIKHLPFHTGRVQITE" misc_feature 14816..15847 /locus_tag="lmo0012" /note="phosphomevalonate kinase, ERG8-type, Gram-positive branch; Region: Pmev_kin_Gr_pos; TIGR01220" /db_xref="CDD:130287" regulatory 15882..15921 /regulatory_class="terminator" regulatory 16205..16210 /regulatory_class="ribosome_binding_site" gene 16219..17325 /gene="qoxA" /locus_tag="lmo0013" /db_xref="GeneID:984936" CDS 16219..17325 /gene="qoxA" /locus_tag="lmo0013" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="AA3-600 quinol oxidase subunit II" /protein_id="NP_463546.1" /db_xref="GeneID:984936" /translation="MSKVLKSLLLTALLGVTGLISGCGDLTVLNPKGPVAKGQSDLII YSIIFMLVIVLTIFVLFTIMLVKYRERKDISNYEPDMHGSKKLEIFWTLIPVAIVIAL AIPTVKTIYAGEEAPKVTSHKDPIIIYATSADWKWIFSYPDESIETVNYVNIPTDRPV LFKLTSADTMTSFWVPQLGGQKYAMSGMTMNLYLQADEVGTYKGRNANFNGEGFADQR FDVVAQSEKDFKKWAKETKASSPVITQDIYDRLLIPGSSKKKTYSGTHLAFVDVAADP EYVFYAYKRFGYEMTNPHNPNTKSTISDEPMLPVRPVTVTNPQFERHDMKPQIIKNGE GYHEDKHREDEMKKMEEDIQTNEFNKKESDDAGK" misc_feature 16261..16929 /gene="qoxA" /locus_tag="lmo0013" /note="cytochrome aa3 quinol oxidase, subunit II; Region: QOXA; TIGR01432" /db_xref="CDD:273621" regulatory 17328..17333 /regulatory_class="ribosome_binding_site" gene 17344..19323 /gene="qoxB" /locus_tag="lmo0014" /db_xref="GeneID:984962" CDS 17344..19323 /gene="qoxB" /locus_tag="lmo0014" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="AA3-600 quinol oxidase subunit I" /protein_id="NP_463547.1" /db_xref="GeneID:984962" /translation="MKWNEFIVTGDPMILGAQISIVLVSIGVVALLTYTKKWKWLMKE WISSVDHKKIGIMYLLAAVLMFFRGGVDALMMRTQLALPDMKFLDAQHYNEVFSTHGT IMILFMAMPFIIGLMNIAVPLQIGARDVAFPFLNNLSFWTFFMGAMLFNLSFVIGGSP DAGWTNYAPLATDFSAGYGINFYLLGVQIAGIGTLMTGINFFVTILRMRTKGMTLMKM PMFTWSSLITSLIIIFAFPVLTVALALMSFDRLFGTAFFTLTNGGLPMMWANLFWVWG HPEVYIVILPAFGIFSEIISTFSRKKLFGYPAMVAAMAVISLLSFLVWVHHFFTMGSG ALVNSFFSITTMMIAIPTGIKIFNWLFTMYKGRITFTTPMLWSLAFIPNFVVGGVTGV MLAMAAADYQYHNTYFLVSHFHYVLIAGTVFSCFAGLTYWYPKMVGYRLNEKIGKWFF WIFVVGFNVCFFPQYFLGLDGMPRRIYTYVQGDGWTTLNFISTVGGFLMGVAFLVLCY NIYYSYKNSKREVTGDPWDARTLEWATSSAVPPKYNFAVLPEWNDLDDFWNRKQKGDP YVNDKNYKPIHMPSNTMVGFVMSVFFFIAGFGLVFYWYWMGIIGLVGILGCMIYRSFQ NNDGYHVEVEEIKATEEHNARELATGVKEGNPWNL" misc_feature 17347..19266 /gene="qoxB" /locus_tag="lmo0014" /note="Heme-copper oxidase subunit I. Heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and mitochondria which catalyze the reduction of O2 and simultaneously pump protons across the membrane. The superfamily is...; Region: Heme_Cu_Oxidase_I; cl00275" /db_xref="CDD:469701" misc_feature order(17515..17517,17698..17700,17728..17730,17749..17751, 17758..17760,17920..17925,17941..17943,17953..17955) /gene="qoxB" /locus_tag="lmo0014" /note="D-pathway [active]" /db_xref="CDD:238832" misc_feature order(17545..17547,17557..17559,17566..17571,17617..17619, 17626..17634) /gene="qoxB" /locus_tag="lmo0014" /note="Putative ubiquinol binding site [chemical binding]; other site" /db_xref="CDD:238832" misc_feature order(17641..17643,18583..18585,18595..18597,18721..18723, 18838..18840) /gene="qoxB" /locus_tag="lmo0014" /note="Low-spin heme (heme b) binding site [chemical binding]; other site" /db_xref="CDD:238832" misc_feature order(18133..18135,18148..18153,18541..18543,18553..18558, 18763..18765) /gene="qoxB" /locus_tag="lmo0014" /note="Putative water exit pathway; other site" /db_xref="CDD:238832" misc_feature order(18172..18174,18319..18324,18577..18579) /gene="qoxB" /locus_tag="lmo0014" /note="Binuclear center (heme o3/CuB) [ion binding]; other site" /db_xref="CDD:238832" misc_feature order(18172..18174,18184..18186,18217..18219,18319..18324, 18397..18399,18406..18408) /gene="qoxB" /locus_tag="lmo0014" /note="K-pathway [active]" /db_xref="CDD:238832" misc_feature order(18322..18324,18553..18558,18763..18768) /gene="qoxB" /locus_tag="lmo0014" /note="Putative proton exit pathway; other site" /db_xref="CDD:238832" regulatory 19298..19303 /regulatory_class="ribosome_binding_site" /gene="qoxB" /locus_tag="lmo0014" gene 19311..19922 /gene="qoxC" /locus_tag="lmo0015" /db_xref="GeneID:984980" CDS 19311..19922 /gene="qoxC" /locus_tag="lmo0015" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="AA3-600 quinol oxidase subunit III" /protein_id="NP_463548.1" /db_xref="GeneID:984980" /translation="MESVETNKNLPIEYRSEQGRLNILGFWIFLGAEIALFATLFATY FVMRKAGSNAGHPPAEMFELWLVLIMTFLLLTSSFTCGLAIGEMRKGNVKMLTIYSII TLILGAGFVGFELYEFAHYVTEGVTMQVGSYWSAFFVLLGTHGLHVTVGIFWISFILI QIKMHGLTPKTASKVFISSLYWHFLDVVWIFIFTGVYLLGMVN" misc_feature 19347..19916 /gene="qoxC" /locus_tag="lmo0015" /note="cytochrome aa3 quinol oxidase, subunit III; Region: QoxC; TIGR02897" /db_xref="CDD:131943" misc_feature order(19368..19373,19383..19385,19392..19394,19413..19418, 19425..19430,19437..19439) /gene="qoxC" /locus_tag="lmo0015" /note="Subunit I/III interface [polypeptide binding]; other site" /db_xref="CDD:239214" misc_feature order(19389..19391,19413..19415,19527..19529,19536..19538, 19548..19553,19836..19838,19857..19859) /gene="qoxC" /locus_tag="lmo0015" /note="Subunit III/IV interface [polypeptide binding]; other site" /db_xref="CDD:239214" regulatory 19908..19913 /regulatory_class="ribosome_binding_site" /gene="qoxC" /locus_tag="lmo0015" gene 19924..20256 /gene="qoxD" /locus_tag="lmo0016" /db_xref="GeneID:984983" CDS 19924..20256 /gene="qoxD" /locus_tag="lmo0016" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="quinol oxidase aa3-600 subunit IV" /protein_id="NP_463549.1" /db_xref="GeneID:984983" /translation="MTQNNKSNAAHAEGGIPWKHIVGFALSVVLTLLAVWVALYSTLT TNVKVVIIFIFAFIQAALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVME IGHMNHLL" misc_feature 19957..20238 /gene="qoxD" /locus_tag="lmo0016" /note="cytochrome aa3 quinol oxidase, subunit IV; Region: QoxD; TIGR02901" /db_xref="CDD:200218" regulatory 20264..20313 /regulatory_class="terminator" gene complement(20308..21426) /locus_tag="lmo0017" /db_xref="GeneID:984984" CDS complement(20308..21426) /locus_tag="lmo0017" /experiment="EXISTENCE:[PMID:19448609]" /note="CapA protein (polyglutamate capsule biosynthesis)" /codon_start=1 /transl_table=11 /product="capsule biosynthesis protein CapA" /protein_id="NP_463550.1" /db_xref="GeneID:984984" /translation="MKSRKKGIILVLSVILIFSIGLLVNNLMTNNKDTAKPKKKTVAA VKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVLAEKGMDYPFNNVREELKSSDYTFVD LETAITTRTKKVPYQEFWIKSDPSSLTALKNAGVDMVNISNNHILDYYEDGLLDTTAA LRANNLAYVGAGKNEDEAYQLKVADIKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGY DLNLVEEKIKEERAKNKDIDYMVVYFHWGVEKTNTPVDYQTQYVKKLVDDNLVDAIVA SHPHWLQGFEVYKDVPIAYSLGNFLFPDYVSGHSAETGIYKLNFDQGKVTAHFDPGII SGNQINMLEGSSKTAQLNYLQSISPNATINSNGDISAK" misc_feature complement(20353..21246) /locus_tag="lmo0017" /note="Poly-gamma-glutamate biosynthesis protein CapA/YwtB (capsule formation), metallophosphatase superfamily [Cell wall/membrane/envelope biogenesis]; Region: CapA; COG2843" /db_xref="CDD:442091" regulatory complement(21434..21439) /regulatory_class="ribosome_binding_site" regulatory 21637..21642 /regulatory_class="ribosome_binding_site" gene 21652..23085 /locus_tag="lmo0018" /db_xref="GeneID:984990" CDS 21652..23085 /locus_tag="lmo0018" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="beta-glucosidase" /protein_id="NP_463551.1" /db_xref="GeneID:984990" /translation="MTESKFPKDFLWGGAVAANQCEGAYLEDGKGLSLVDILPTVEDG RWEALFNPSKALATDYGFYPSHESIDFYHRYKEDIKLMAEMGFKCFRMSISWPRIFPN GDETTPNEKGLAFYDAVFDECHKYGIEPVVTINHFDTPLEVFKKYGGWKNRKCIDFYL NFCEAIFTRYKDKVKYWMTFNEINMILHLPYIGGGLDVTKEDNPEEVKYQAAHHQLVA SALATKLGHEINPENQIGCMLAAGNTYPMTCNPKDVWKSIEADREGYFFIDVQARGYY PSYTKRFFKEHNINIKMEDGDLDALRDHTVDYVAFSYYSSRLTSADPEKNKETEGNVF ATLKNPYLKASEWGWQIDPLGLRITMNTIYDRYQKPLFIVENGLGAVDTVEEDGSITD DYRIDYMREHVREMGEAIEDGVELLGYTPWGCIDLVSAGSGEMKKRYGFIYVDRDNKG NGTLNRSKKKSFDWYKKVIETNGKDID" misc_feature 21667..23082 /locus_tag="lmo0018" /note="A functionally diverse superfamily containing glycosyl hydrolase families 1,5,10,17,44,72, and others; Region: Glycosyl hydrolases; cl23725" /db_xref="CDD:474034" regulatory complement(23086..23124) /regulatory_class="terminator" regulatory 23097..23135 /regulatory_class="terminator" gene complement(23132..23953) /locus_tag="lmo0019" /db_xref="GeneID:985005" CDS complement(23132..23953) /locus_tag="lmo0019" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0019" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463552.1" /db_xref="GeneID:985005" /translation="MGTFFSKWGKWILVLGLVFSVFSVSTAGQAAAKETVINKQMVTT ASLNVRSTNSTSGKVIGWLKNNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYVKAATAT PTPKPPTPKIVQMNVPLIVQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKRHKS NPNYGFVGNPFSKSGWTIYPPALVNQVKKYTGSAKNMTGTNLAGIKNQLNKKRPVVAW VSKFHGFSVHAITITGYDKNNFYYNDSWSGQKNARISQSYFNTCWSKQAKRAISY" misc_feature complement(23135..23953) /locus_tag="lmo0019" /note="Predicted cysteine peptidase, C39 family [General function prediction only]; Region: YvpB; COG4990" /db_xref="CDD:444014" regulatory complement(23959..23964) /regulatory_class="ribosome_binding_site" regulatory 24180..24185 /regulatory_class="ribosome_binding_site" gene 24194..24934 /locus_tag="lmo0020" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985023" CDS 24194..24934 /locus_tag="lmo0020" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="NP_463553.1" /db_xref="GeneID:985023" /translation="MAEPKYAIIINDIKRLISDGTFKPGEKIYSEDELKKKYNVSNTT VVRALHELVRAGILARYQGKGTYVSKSIINEEVIFNEYTTVPNGRFNRKTKITNEHTK VVAINEIQDARIAKKLQIPPENMIVHFQRIRLIDDLPWTVQNNYMAKSNLINVDLTNF EKFNSLSEVIKELYGINILHEAMKERIEVEFPVKDKNNFKLLEIDTELPLYHIERITY VPEGQPYEYIESYLRHNFYSIEIEKKKQ" misc_feature 24194..24919 /locus_tag="lmo0020" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: MngR; COG2188" /db_xref="CDD:441791" regulatory 24936..24941 /regulatory_class="ribosome_binding_site" gene 24950..25351 /locus_tag="lmo0021" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985040" CDS 24950..25351 /locus_tag="lmo0021" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIA" /protein_id="NP_463554.1" /db_xref="GeneID:985040" /translation="MDYIIAAHGRYAQEVKDSCQMITGQTTNISAITFTEEMGVTDVL DAYMAVYSPVNETAIIVDIVGGTPCNAAQMFSTKHPEVKVVSGLSLGLIIPLSLGESL EEAMLGAKDNIQFVEQKASHTIVSDDGEEED" misc_feature 24950..25315 /locus_tag="lmo0021" /note="PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family...; Region: PTS_IIA_man; cd00006" /db_xref="CDD:237978" misc_feature order(24971..24973,25013..25018,25049..25051,25148..25150, 25250..25252) /locus_tag="lmo0021" /note="active pocket/dimerization site [active]" /db_xref="CDD:237978" misc_feature order(24971..24973,25133..25135,25148..25150) /locus_tag="lmo0021" /note="active site" /db_xref="CDD:237978" misc_feature 24971..24973 /locus_tag="lmo0021" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:237978" regulatory 25338..25343 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0021" gene 25351..25839 /locus_tag="lmo0022" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985051" CDS 25351..25839 /locus_tag="lmo0022" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIB" /protein_id="NP_463555.1" /db_xref="GeneID:985051" /translation="MGSNGIKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNE MEKVALKTAVPAGVKLSILTVKGAANNINNDKYAGQQVFLIVKSPHALRGLVDAGVEL PQINVGNMSTKAGSRQIKKSVSVTDENLEDFDYLAQKGIKITAQMVPSEDAVEFANLL KK" misc_feature 25363..25830 /locus_tag="lmo0022" /note="Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]; Region: AgaB; COG3444" /db_xref="CDD:442668" regulatory 25849..25854 /regulatory_class="ribosome_binding_site" gene 25862..26665 /locus_tag="lmo0023" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985053" CDS 25862..26665 /locus_tag="lmo0023" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIC" /protein_id="NP_463556.1" /db_xref="GeneID:985053" /translation="MDLAIWQIILLVILAACTILDALTLVIGLNFPVITGTLAGIIMG DMVLGLAIGATLQLMVLGVGTYGGASIPDFTTGAIVGTVFAVLSGQDAEFAIGLAIPV GLLMVQLDILARFTNTFFLHRIDSNIASGNISAVKRNIWYGALPWALSRAVPVFIMLT FGQSVVDFILNEIPEWLMGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAY LKVPMLGVALIGVALAIIYFKQNFKNPVAAGANGAALVGEENEDGEYED" misc_feature 25862..26650 /locus_tag="lmo0023" /note="Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IIC component [Carbohydrate transport and metabolism]; Region: ManY; COG3715" /db_xref="CDD:442929" regulatory 26631..26636 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0023" gene 26640..27467 /locus_tag="lmo0024" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985058" CDS 26640..27467 /locus_tag="lmo0024" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannose transporter subunit IID" /protein_id="NP_463557.1" /db_xref="GeneID:985058" /translation="MKMANTKTEQDFEKVLKRRDLIAANFRWLFASQICWNYERMMST GYLYSILPTLRKLYKTDDDLKDMMNMHNQFFNTNPMVGGLILGMDMAIEEREKKASKE VVTGLKTGLMGPFAGVGDTIFGVILPTIFGSIAAYMGLQGNVTGVVIWVLVNILVVGA RFTLLPLGYKQGAKLVTEFADRLNALTDAAILLGVTVVGALIPTVIKATVPFVYKSGK VELKMQDMLDQIMPSLVPVLLVALIYALLGHKKMTSTKAILLVMVIAIILFNLKILG" misc_feature 26676..27464 /locus_tag="lmo0024" /note="Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component [Carbohydrate transport and metabolism]; Region: ManZ; COG3716" /db_xref="CDD:442930" regulatory 27479..27484 /regulatory_class="ribosome_binding_site" gene 27495..28199 /locus_tag="lmo0025" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985061" CDS 27495..28199 /locus_tag="lmo0025" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoheptose isomerase" /protein_id="NP_463558.1" /db_xref="GeneID:985061" /translation="MGLTFFDKARELTEELEKTQAESIHQAAKLVADSIMNDGIIQAF GSGHSYAAAIEVCGRAGGLIPSKVIMDPAGGYYESIEGVGSLLTHRLQAKPNDIFFLI SNSGRNPMGIELAEWIKSQGCKLIVVTALDASQTAASRHSSGKLLYEFADVILDNRSV QGDAALELEGLEGKVCGTSSFSAVLLLQQTIYEAVELMLEKGYTPPVYRSANIDGGYE YNFAIEDKFADRIFHL" misc_feature 27495..28196 /locus_tag="lmo0025" /note="sugar isomerase domain-containing protein; Region: PRK02947" /db_xref="CDD:179510" misc_feature order(27639..27641,27801..27803) /locus_tag="lmo0025" /note="putative active site [active]" /db_xref="CDD:240144" regulatory 28209..28246 /regulatory_class="terminator" regulatory 28241..28246 /regulatory_class="ribosome_binding_site" gene 28254..28895 /locus_tag="lmo0026" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985069" CDS 28254..28895 /locus_tag="lmo0026" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="copper homeostasis protein CutC" /protein_id="NP_463559.1" /db_xref="GeneID:985069" /translation="MILKEVCIENTTNLVNVIEAGANRVELCDNLAEGGTSVSYGVAK HVVKICHEQNVSVMAMVRPRKGNFVYTKEEISVMIDDILMYKKIAVDGVVFGCITDSG LLDKPAINELLKAAAGLEVTFHMAFDELVETEKLSAIDWLVEQGVTRILTHGGDGAKL PEETFVQWRKYIDYAAGRIIILPGGGIKSHNLEWIIKETGAAEIHGTDLFGER" misc_feature 28254..28868 /locus_tag="lmo0026" /note="Copper homeostasis protein CutC [Inorganic ion transport and metabolism]; Region: CutC; COG3142" /db_xref="CDD:442376" regulatory 29086..29091 /regulatory_class="ribosome_binding_site" gene 29100..31004 /locus_tag="lmo0027" /db_xref="GeneID:985074" CDS 29100..31004 /locus_tag="lmo0027" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS beta-glucoside transporter subunit IIABC" /protein_id="NP_463560.1" /db_xref="GeneID:985074" /translation="MKYEQLAKDILKNVGGKENINSVFHCITRLRFKLKDENIANTKE IEKLDGVISVIKSGGQYQVVIGNHVPDVFKAVLEVGGISAEGDEGSSAPATGNIFNRF IDMISGVFTPVLGVLAATGMIKGFTAMFVAFGWITVTSGTYQLLYAIGDCLFYFFPIF LGYTAMKKFGGNIFIGMAIGGALVYPTLAGITAGDPLYTLFAGTIFESPIHVTFLGIP VILMSYASSVIPIIVATYFGSKVEKGFKKIIPDVIKTFVVPFCTLLIVVPITFIVIGP IATWAGQLLGAGTIWVYNLSPIIAGLILGGFWQVFVIFGLHWGLVPVAINNLTVLGHD PILAMTFGASFAQIGAVLAVFFKSRNKKIKSLSIPAFISGIFGVTEPAIYGVTLPLKK PFIMSCIAGGIGGGIIGFAGSQTYIMGGLGIFGLPNFFKPGSGISGEFWWVVIAIVIS FILGFILTYVVGFKDPADVVVEQSNTVEGETLIERETIPAPVVGEIVTLADVKDEAFS SGALGKGVAIIPTVGRVVAPAAGTVTTIFPTGHAIGITTKDGAEVLIHIGMDTVQLEG KFFTAHVKQGDVIEKGQLLTEFDIEGIKAAGYDVTTPVVVTNSNQYLDVMITDAKEAK LEERLITLVI" misc_feature 29100..30998 /locus_tag="lmo0027" /note="PTS system beta-glucoside-specific transporter subunits IIABC; Provisional; Region: PRK09824" /db_xref="CDD:236627" regulatory 31019..31057 /regulatory_class="terminator" regulatory 31076..31082 /regulatory_class="ribosome_binding_site" gene 31088..31963 /locus_tag="lmo0028" /db_xref="GeneID:985088" CDS 31088..31963 /locus_tag="lmo0028" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="microcin C7 self-immunity protein MccF" /protein_id="NP_463561.1" /db_xref="GeneID:985088" /translation="MLVKGDTVGIICCSDGRKKEDENRIALLEQVLKTEFSLQVVFAE TIFQKAESPFSGTPQARAIELMKLYQRSDVQMIFDISGGDAANQVLPYLDFDIIRNAQ KPFVGYSDLTVILNAIYTKTEQMGYNYQLLHLVGKDSELQQSHFRKTFFENRVLISGE QLNEFVWRGGEVIGGNIRCFLKLAGTNFMPDFTNKIILLESLGGKEAKLASYVAQLEQ LGAFSKCLGVIVGQHSEAEENGEYERIGRLYQQIGRKYKLPIFRTSEIGHSVDAKPCL IGAKVNVSRETLTNF" misc_feature 31103..31936 /locus_tag="lmo0028" /note="Microcin C7 self-immunity protein determines resistance to exogenous microcin C7; Region: Peptidase_S66_mccF_like; cd07062" /db_xref="CDD:132883" misc_feature order(31346..31351,31628..31633,31637..31642,31706..31711, 31715..31720,31727..31732,31838..31843) /locus_tag="lmo0028" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:132883" misc_feature order(31412..31414,31685..31687,31889..31891) /locus_tag="lmo0028" /note="catalytic triad [active]" /db_xref="CDD:132883" regulatory 31988..32018 /regulatory_class="terminator" gene 31997..32107 /locus_tag="lmos01" /db_xref="GeneID:18245120" misc_RNA 31997..32107 /locus_tag="lmos01" /product="rli22" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245120" regulatory 32184..32189 /regulatory_class="ribosome_binding_site" gene 32197..32535 /locus_tag="lmo0029" /db_xref="GeneID:985092" CDS 32197..32535 /locus_tag="lmo0029" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0029" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463562.1" /db_xref="GeneID:985092" /translation="MKVEGLLGFLGAALGIGFSLMVLVIPDISQALEEESFFFYMLTI GSLVLSGVGLAGSFIVSHKPRLGGAMMVAAAIGCTMSISIMFLLPIVLLAVGGLIALI NYEEAASVEE" misc_feature 32200..32439 /locus_tag="lmo0029" /note="Protein of unknown function (DUF4064); Region: DUF4064; pfam13273" /db_xref="CDD:433076" regulatory complement(32535..32563) /regulatory_class="terminator" regulatory 32546..32574 /regulatory_class="terminator" gene complement(32571..33380) /locus_tag="lmo0030" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985106" CDS complement(32571..33380) /locus_tag="lmo0030" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463563.1" /db_xref="GeneID:985106" /translation="MEKYLICSDLDGTLLLKNQTISPKTLNLLQQLIEEGHHFAVSTG RMYNSATDFAKLVHPKADVIASNGGVVAVSGEIIQQEKMKQSALLETFLLCQNHDLPV FFFSTDTVFYTKNPPYYFTDEEDKGRVNATKLVAIKSREIFLEHADQFINGIVIEEED FDKLAVLRSDLEKLSDVSILSSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFG DGENDIGMLEVAGAGVAMENASELVKKSADFVTTANDADGIYYFLKKHLNR" misc_feature complement(32592..33368) /locus_tag="lmo0030" /note="Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; Region: Cof-subfamily; TIGR00099" /db_xref="CDD:272905" regulatory complement(33387..33392) /regulatory_class="ribosome_binding_site" gene complement(33397..34452) /locus_tag="lmo0031" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985116" CDS complement(33397..34452) /locus_tag="lmo0031" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LacI family transcription regulator" /protein_id="NP_463564.1" /db_xref="GeneID:985116" /translation="MKKITIQEIAKLSGVSVSTVSRVLNNSPSVSAAKRKKIQAIIDE HNYTPSVFARGMVNKQTKNIGVILPDISNPYFISLITQIQKFALDYMFSTILFNTMLA EPDNKNNQHPLTEEDYLKIILEKQVDGLLILGGEIDKEIVPKEYITALNQLNNAIPVV VIGSKIPELNCLFIERNLKKGVTTLVSHLTALGHKNIGFIGGEAGVKITTYRLESFKE AMTSYQHPVNDDWVVLSDYYTADGYAAMTHLLENSTTLPTALVAINDNVAIGAIRAIN DAKLSCPEDIAIVSCDQFMNGDYQTPRLTSMDQHNEYLGKMAILQLISAINGQVEPMI INHNPELIIRESCGSKL" misc_feature complement(33409..34452) /locus_tag="lmo0031" /note="DNA-binding transcriptional regulator, LacI/PurR family [Transcription]; Region: PurR; COG1609" /db_xref="CDD:441217" regulatory complement(34465..34470) /regulatory_class="ribosome_binding_site" regulatory 34640..34645 /regulatory_class="ribosome_binding_site" gene 34654..35619 /locus_tag="lmo0032" /db_xref="GeneID:985121" CDS 34654..35619 /locus_tag="lmo0032" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="xylose repressor" /protein_id="NP_463565.1" /db_xref="GeneID:985121" /translation="MDIQESVIGIDLGGTKILIGEVTKDGEVLNSKSYPSNTENQTKA TETLLKVLADYTQNIGFIAPKQTGIGVGLVGRVDHKSGVWLEIEPGKSNPTPLAGILE AKTGLPVSLGNDVVCATMAEKQFGWGRETNDFIYLNVGTGLAAGFVVDGRITQGGHFN AGEVGHAVVDIHSDVLCGCGRRGCVERLASGLGIKEEALRHLNSYPTSILAETQTELT GKMVLHAAEQKDELAEKIIDNATFQLANLIMNLVRTTDPECVILGGGVTRNEHFFQKI QDNLQSNTIRFVTKGVVRSKLEKDKVGLIGAAVIGMRLGNEGGKE" misc_feature 34672..35592 /locus_tag="lmo0032" /note="Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain [Carbohydrate transport and metabolism, Transcription]; Region: NagC; COG1940" /db_xref="CDD:441543" regulatory 35604..35609 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0032" gene 35616..38018 /locus_tag="lmo0033" /db_xref="GeneID:985131" CDS 35616..38018 /locus_tag="lmo0033" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="endoglucanase" /protein_id="NP_463566.1" /db_xref="GeneID:985131" /translation="MKPSMKRQIAQTGIIHRPLPIETEHALETLAKKKQVLSSRTLFS SKQHVSLEFTHQGAGDFTISGQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISASI GNEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGTVKVPDIYGREGVHGVNLINHEW NDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWLP QNNTLIYSHNGYSKDMPKVAFCANKHAATTFTIHDKETDKVVFTGKSYQNATETGNFV ILDFSDLQTVGEYYLKFADMQTEIFQIGTSEVIWESSIWKSLNFIFCERCGCPVFGKH TTCHADIIAEHDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMAASLPEKEETLRM RLLEEGEWGLDFILKTRFGDGFRATSAGMTRWTDGLVGGMDDAIARVHNQAYENFYCA GIEAYIGSQIADNATMQNHLLRIAEEDLLFAIKELEKHGTSQKPIFWEHTYQTSESLY YATASWAASMVYQLTNKEIYAEKAAEWLDLMLEAQEKAGIRDSETSELYKGFFYRDKS HKVIQHFNHQAREHLYLLALEAALETQPSHAEKQTWLQAVEMYGDYLKKVTRFTKPYP LIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIKINDEVALRKFPIWFSF RGNNAILLSAGKAASIAGKILKDKALLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQQ YSVLNGEITGEIPVGMETFRNEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITG KS" misc_feature 36288..36524 /locus_tag="lmo0033" /note="N-terminal Early set domain associated with the catalytic domain of cellulase; Region: E_set_Cellulase_N; cd02850" /db_xref="CDD:199881" regulatory 38017..38022 /regulatory_class="ribosome_binding_site" gene 38031..39383 /locus_tag="lmo0034" /db_xref="GeneID:985136" CDS 38031..39383 /locus_tag="lmo0034" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS cellbiose transporter subunit IIC" /protein_id="NP_463567.1" /db_xref="GeneID:985136" /translation="MSSERSLSSRFIEGLSIFAQKISSQKHIMAIRDGFAAMIPITII AAFFLLVNNVLLQPENGLLKFIPNVENYLGVGIQVYNATLGIMAILAAFLIGNFLAKS YGMEGRTEGVIAVAAYVVLIPASSHLMSVDGKAFEAGGVLTQEMTSSTGMFLAIIAAL VSITMLAKFSKSKKLKISMPESVPPAIAKSFNILIPSFLVLSILAIIEVLVVSFVSMS IPEIIVKVLQIPLVGGFQTLPGILLYVFLAGFLWVFGIHGAFVLGAISGPVLLTSLQQ NIDAVNAGTALPNIVTQPFLDAFVYMGGGGTIICLVIAIFIASKRPDHRMVTKFGLIP SIFNVSEPLMFGLPVVFNPIYGIPLVIAPLASTAMAYFATSWGWISQTYILIPWVTPP VLSGYLATGGDIRASILQIAIIIVGTLIYLPFVLVANRAYVLEQKAAGKVEAVTNGEV " misc_feature 38049..39347 /locus_tag="lmo0034" /note="Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]; Region: CelB; COG1455" /db_xref="CDD:441064" regulatory 39371..39376 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0034" gene 39385..40470 /locus_tag="lmo0035" /db_xref="GeneID:985145" CDS 39385..40470 /locus_tag="lmo0035" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glucosamine--fructose-6-phosphate aminotransferase" /protein_id="NP_463568.1" /db_xref="GeneID:985145" /translation="MKPTMMTYINEEEEMCRAILANFQTNAEKLESLVKNGAKEWLIL ATGSSLNAAQSAKYYIENIADVRITVEEPFNHLYYEKLSNHLDLVIGISQSGQSTSTI SALERVKKEASVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKGFTATVLTLML TGLHFAYKTAQIDETKFNNEINAFSRATNAIPATIAETEAFYERWQEEFATAPKFTAI GYGPTVGTCKEFETKFSETVRVPSQGLDLEAFMHGPYLEVNPQHRIFFLETESAVTER LVALRNYESKYTPFTYTVKFGTAGNDRTLLIPADLDEYQAPFLMILPFQILAHHIAEL KGNKLTERIYTDFGVAMKSKTKPGDYA" misc_feature 39433..40395 /locus_tag="lmo0035" /note="Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain [Cell wall/membrane/envelope biogenesis]; Region: AgaS; COG2222" /db_xref="CDD:441824" misc_feature 39508..39882 /locus_tag="lmo0035" /note="SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal...; Region: SIS_GlmS_GlmD_1; cd05008" /db_xref="CDD:240141" misc_feature order(39520..39525,39553..39558,39565..39570,39589..39591, 39595..39597,39607..39609,39616..39618,39682..39684) /locus_tag="lmo0035" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:240141" misc_feature order(39526..39531,39661..39669) /locus_tag="lmo0035" /note="active site" /db_xref="CDD:240141" regulatory 40483..40530 /regulatory_class="terminator" regulatory 40691..40696 /regulatory_class="ribosome_binding_site" gene 40705..41730 /locus_tag="lmo0036" /db_xref="GeneID:985152" CDS 40705..41730 /locus_tag="lmo0036" /EC_number="2.1.3.3" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of putrescine from carbamoyl-putrescine during agmatine degradation" /codon_start=1 /transl_table=11 /product="putrescine carbamoyltransferase" /protein_id="NP_463569.1" /db_xref="GeneID:985152" /translation="MNKKRDFIDTKDFSKEEILFMIEIGRKMKESIKNGHYPQLLKHK TLGMIFEQSSTRTRVSFETAMTQLGGHAQYLAPGQIQLGGHESVGDTAKVLSRLVDIL MARVERHQTVVELANTAAIPVINGMSDYNHPTQELGDAITMFEHLPKGKKIEDCKIVF VGDATQVCASTMFMATKLGMDFVQFGPKGFQLREEHLKVAEENCEVSGGSYLITEDVD IALKDADFIYTDVWYGLYEAELSEEERMKTFYPKYQVNKELISKAAPHVKFMHCLPAT RGEEVTDEVLDAPYSVVIDEAENRLTAMRALLVYFMNPYVKEAGFAVAEKYDAELELL LRNGAGL" misc_feature 40720..41709 /locus_tag="lmo0036" /note="putrescine carbamoyltransferase; Region: putr_carbamoyl; TIGR04384" /db_xref="CDD:275177" regulatory 41787..41792 /regulatory_class="ribosome_binding_site" gene 41803..43188 /locus_tag="lmo0037" /db_xref="GeneID:985153" CDS 41803..43188 /locus_tag="lmo0037" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid transporter" /protein_id="NP_463570.1" /db_xref="GeneID:985153" /translation="MEKKKKFRLFDAVLMAVCVVLVVESAAPAAAIGSSQFFWWIALL ILFFLPYGLVSAELGTTYDDEGGIYDWVKRAFGRKWGARVAWLYWINYPIWMASLAVL FVEVITQIFPVSFGTPVSILIQLIFVWIVVIVSCYPVSDSKWILNIAAFCKVAIMLCL GVLGIYFAITKGLANDFSGKALLPTFDLESLSFISVILFNFLGFEVVTTLASDMENPK KQIPQAIIYGGILIAFFYLLAAFGMGAAIPTSELSTSGGLIDSFIMLIGGVNPFVIII GIMFMYTLVANLVSWALGVNYVAMYAAKNKDLPAVFGKTNPKNDMPTGTSILNGIVAS VLIVAAPLIPNENIFWAFFALNVVALLGSYILMFPAFLKLRKLDPDRERPFKVPGGKI LLYLMTFVPMILLIITLIFSAVPLNGSSAELNEKIPILIGTIVAVIVGEICIWLAGKR KDKGEIKNEND" misc_feature 41806..43050 /locus_tag="lmo0037" /note="Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; Region: PotE; COG0531" /db_xref="CDD:440297" regulatory 43161..43166 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0037" gene 43175..44266 /locus_tag="lmo0038" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985162" CDS 43175..44266 /locus_tag="lmo0038" /experiment="EXISTENCE:[PMID:19448609]" /note="agmatine deiminase 1; catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis" /codon_start=1 /transl_table=11 /product="agmatine deiminase" /protein_id="NP_463571.1" /db_xref="GeneID:985162" /translation="MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQ KAFVDVATAISHFEPVTVVASSSQYVNARYMLSDEIRVVEMDNDDAWVRDSGPTFVVN DSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIH VDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVD NIFNYVRPGVVALAWTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILI TDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVIFPLFGDPNDELAREKLQQLY PNCEVVGVKAREILLGGGNIHCITQQVPR" misc_feature 43190..44263 /locus_tag="lmo0038" /note="agmatine deiminase; Region: agmatine_aguA; TIGR03380" /db_xref="CDD:132423" regulatory 44269..44274 /regulatory_class="ribosome_binding_site" gene 44282..45223 /locus_tag="lmo0039" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985163" CDS 44282..45223 /locus_tag="lmo0039" /EC_number="2.7.2.2" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP" /codon_start=1 /transl_table=11 /product="carbamate kinase" /protein_id="NP_463572.1" /db_xref="GeneID:985163" /translation="MNQKIVVALGGNAILSSDASAEAQRSALEETAEYLVQFIENGDD LIISHGNGPQVGNLMLQQHAGASEKNPAMPLDTCVAMTQGSIGYWMQNALDKAFLKHG LDKVAVSLITQVVVDKDDPAFEKPTKPIGPFLNKEEAEKEMAETGAIFLEDAGRGYRK VVPSPRPLSIKEHQIIKQLVDSGVVTISAGGGGVSVVENGLDLSGVETVIDKDFASEK LAELIDADLLVILTGVENVYINYNQPNQKKLEQVTVSELEKYIDEKQFAAGSMLPKIE AATAFVKERPHAKAIITSLENIGAMLERGAGTVIVAG" misc_feature 44282..45217 /locus_tag="lmo0039" /note="putative amino acid kinase; Reviewed; Region: PRK12353" /db_xref="CDD:237071" misc_feature order(44303..44305,44309..44314,44429..44437,44663..44665, 44912..44920) /locus_tag="lmo0039" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:239768" misc_feature order(44312..44314,44975..44980,44993..44995,45002..45004, 45077..45079,45089..45094,45101..45103) /locus_tag="lmo0039" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:239768" misc_feature order(44312..44314,44975..44980,44993..44995,45002..45004, 45077..45079,45089..45094,45101..45103) /locus_tag="lmo0039" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:239768" misc_feature order(44459..44461,44498..44500,44507..44512,44519..44521, 44531..44536,44543..44545,44552..44557,44567..44569, 44606..44614,44618..44620,44795..44797,44804..44806, 44888..44890,44894..44896) /locus_tag="lmo0039" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:239768" regulatory 45241..45270 /regulatory_class="terminator" regulatory 45310..45315 /regulatory_class="ribosome_binding_site" gene 45325..46434 /locus_tag="lmo0040" /db_xref="GeneID:985194" CDS 45325..46434 /locus_tag="lmo0040" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis" /codon_start=1 /transl_table=11 /product="agmatine deiminase" /protein_id="NP_463573.1" /db_xref="GeneID:985194" /translation="MGQLKGLPVEDGFRMPGEYEPHIGCFMIWPERPDNWRLGGKPAQ QNYKEVAVAISNFEPVTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVD DKGDMRGVDWGFNAWGGLLDGLYFPWDKDNQIAKKVCELERIDYYSQKDFILEGCSIH VDGEGTLVTTEECLLSEGRNPNLTKIEIEQTLKKYFHAQKVIWLKHGFYLDETNGHVD NIFNFVAPGEVVLSWTDNKSDPQYEISRECYDILANKTDAKGRTFIIHKLHCPDPVLI TQTESEGVEAINGTFPRQAGDRLAASYVNYYTANGAIIFPLFDDPKDKDAQELLEKLY PDRKIVGIKAREILLGGGNIHCITQHLPDKSTIRE" misc_feature 45340..46410 /locus_tag="lmo0040" /note="agmatine deiminase; Region: agmatine_aguA; TIGR03380" /db_xref="CDD:132423" regulatory 46437..46442 /regulatory_class="ribosome_binding_site" gene 46451..47230 /locus_tag="lmo0041" /db_xref="GeneID:985277" CDS 46451..47230 /locus_tag="lmo0041" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463574.1" /db_xref="GeneID:985277" /translation="MDFYEISSKTVASLTRNERILFDYVVKNMNLIKNQSIREVSAEC FVSTTTFLRFVRKLGFTGYSEFTTVLKFTLLGHTELKPSPFVVEQSDYREEYLKNIIE SVRVLEPSKIKKITKKLVNKPRIYFFAKGLSKHAAKYIKYLYTMSGFLVEFPEDYQYR QAVLPHIGKDDLVFILTYGGHDIELIQTAQKLKSRNETPMLISITGADNNIIQNMSDI NLYIFTDEIEMNNLDITSRISTIAIMELILYQFMEDETSSF" misc_feature 46484..47209 /locus_tag="lmo0041" /note="DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains [Transcription]; Region: RpiR; COG1737" /db_xref="CDD:441343" regulatory 47319..47324 /regulatory_class="ribosome_binding_site" gene 47335..47994 /locus_tag="lmo0042" /db_xref="GeneID:985331" CDS 47335..47994 /locus_tag="lmo0042" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DedA protein" /protein_id="NP_463575.1" /db_xref="GeneID:985331" /translation="MDFITYIIDFILHIDQHLVEIINNFGIWTYIILFLIVFIETGLV VFPFLPGDSLLFAAGALSVLDGSILHIVPLIITLWLAAVLGDTVNYHIGKKIGTSIPE DSWFGKLINKEKMEKAEAFFNKHGGKTIFIARFMPFIRTFAPFVAGASRMNYRYFLNY NILGATVWVLLCTLAGYFFGNFPIVKDNFSLVVIGIIVVSVIPMVVSFIKSKMDKKSA E" misc_feature 47335..47970 /locus_tag="lmo0042" /note="SNARE associated Golgi protein; Region: SNARE_assoc; cl00429" /db_xref="CDD:469768" regulatory 47979..48009 /regulatory_class="terminator" regulatory 48063..48068 /regulatory_class="ribosome_binding_site" gene 48074..49306 /locus_tag="lmo0043" /db_xref="GeneID:985417" CDS 48074..49306 /locus_tag="lmo0043" /EC_number="3.5.3.6" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the degradation of arginine to citruline and ammonia" /codon_start=1 /transl_table=11 /product="arginine deiminase" /protein_id="NP_463576.1" /db_xref="GeneID:985417" /translation="MKMEQALNITSEIGKLQTVLVKRPGSELENITPEYLESLLFDDI PYLKMMQKEHDFFAKTMRDSNIEVLYLEKLAAEALREANNKESFLTKMIKESNQMDES ALYVRDYLMSFDEEEMIRKLMSGLKKSEIPERKKKHLNEMMDEQYPFFLDPLPNLYFT RDPAAVIGNGVTINRMFQPARRRESIFIELILKHHPRFSNQDIPVWSGRGEPFSLEGG DELVLNEETVLVGVSERTDARAVERLAESLFNRSPKIKRVLAVEIPETRSFMHLDTVF TMVNFAQFTIHPAIQNQQGELNIYILEKSENGLEITPRRDFQRVIAEVLDEPEIDFIP CGGEDVIVSAREQWNDGANTLAIAPGEVITYDRNQVSNDLLRSAGIKVHEVISSELSR GRGGPRCMTMPLVRENLK" misc_feature 48080..49300 /locus_tag="lmo0043" /note="arginine deiminase; Provisional; Region: PRK01388" /db_xref="CDD:234949" regulatory 49569..49574 /regulatory_class="ribosome_binding_site" gene 49585..49878 /gene="rpsF" /locus_tag="lmo0044" /db_xref="GeneID:985454" CDS 49585..49878 /gene="rpsF" /locus_tag="lmo0044" /experiment="EXISTENCE:[PMID:19448609]" /note="binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S6" /protein_id="NP_463577.1" /db_xref="GeneID:985454" /translation="MARKYEIMYIIRPNIEEDEKKAVVERFDGILTENGAEIIESKEW GKRRLAYEINDYRDGFYHIVKLNADKADSINEFDRLAKISDDIIRHMVIKEEA" misc_feature 49591..49875 /gene="rpsF" /locus_tag="lmo0044" /note="Ribosomal protein S6 [Translation, ribosomal structure and biogenesis]; Region: RpsF; COG0360" /db_xref="CDD:440129" regulatory 49918..49923 /regulatory_class="ribosome_binding_site" gene 49934..50470 /gene="ssb" /locus_tag="lmo0045" /db_xref="GeneID:985468" CDS 49934..50470 /gene="ssb" /locus_tag="lmo0045" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="single-strand binding protein" /protein_id="NP_463578.1" /db_xref="GeneID:985468" /translation="MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRTFTNQQGER EADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQF LEPRNSNGGGGNNYQSGNNNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNND PFASDGKPIDISDDDLPF" misc_feature 49934..50467 /gene="ssb" /locus_tag="lmo0045" /note="This superfamily includes two oligonucleotide/oligosaccharide binding fold (OBF) domain families. One of these contains the OBF domains of the large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small (RPA3, 14 kDa) subunits of human heterotrimeric...; Region: Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.; cl09930" /db_xref="CDD:471953" misc_feature order(49946..49957,50030..50038,50072..50074,50078..50080, 50141..50143,50168..50170,50201..50203,50210..50212) /gene="ssb" /locus_tag="lmo0045" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:239942" misc_feature order(49961..49969,49985..49987,50015..50017,50036..50041, 50066..50071,50075..50077,50081..50083,50087..50089, 50093..50095,50132..50137,50159..50161,50165..50167, 50171..50176,50213..50215,50219..50221) /gene="ssb" /locus_tag="lmo0045" /note="ssDNA binding site [nucleotide binding]; other site" /db_xref="CDD:239942" misc_feature order(50141..50143,50147..50149,50153..50155,50234..50236) /gene="ssb" /locus_tag="lmo0045" /note="tetramer (dimer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:239942" regulatory 50500..50505 /regulatory_class="ribosome_binding_site" gene 50514..50753 /gene="rpsR" /locus_tag="lmo0046" /db_xref="GeneID:985537" CDS 50514..50753 /gene="rpsR" /locus_tag="lmo0046" /experiment="EXISTENCE:[PMID:19448609]" /note="binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S18" /protein_id="NP_463579.1" /db_xref="GeneID:985537" /translation="MAGGRRGGRRRKKVCYFTSNGITHIDYKDVELLKKFVSERGKIL PRRVTGTSAKYQRKLTVAIKRSRQMALLPFVAEEK" misc_feature 50547..50750 /gene="rpsR" /locus_tag="lmo0046" /note="Ribosomal protein S18 [Translation, ribosomal structure and biogenesis]; Region: RpsR; COG0238" /db_xref="CDD:440008" regulatory 50765..50800 /regulatory_class="terminator" regulatory 50893..50898 /regulatory_class="ribosome_binding_site" gene 50907..51518 /locus_tag="lmo0047" /db_xref="GeneID:985583" CDS 50907..51518 /locus_tag="lmo0047" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0047" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463580.1" /db_xref="GeneID:985583" /translation="MYKKLATVGMTVLLVGALSACSFNDDKDTSSNNSNNETTSSKSS NNESSSDSLQNKSLDMSYEDAINAFKDKHSDAEISSVELEKSLGKYVYKVDGISNDNE YEMKFNAETKEQLSDETDRLDREDAGGVEKENEKLSLDGIKSPKEAMDKAVSEQAGDV TSWKIERELDTTYYEVTVKQDNNKYEIKLNAKTLEILQTEQDD" misc_feature 51084..51260 /locus_tag="lmo0047" /note="Peptidase propeptide and YPEB domain; Region: PepSY; pfam03413" /db_xref="CDD:427284" misc_feature 51330..51515 /locus_tag="lmo0047" /note="PepSY domain containing protein, regulator of zincin peptidase activity [Posttranslational modification, protein turnover, chaperones]; Region: YkoI; COG3212" /db_xref="CDD:442445" regulatory 51532..51570 /regulatory_class="terminator" regulatory 51761..51766 /regulatory_class="ribosome_binding_site" gene 51775..52389 /locus_tag="lmo0048" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985598" CDS 51775..52389 /locus_tag="lmo0048" /experiment="EXISTENCE:[PMID:19448609]" /note="essential for production of a quorum sensing autoinducing peptide" /codon_start=1 /transl_table=11 /product="sensor histidine kinase AgrB" /protein_id="NP_463581.1" /db_xref="GeneID:985598" /translation="MSNFTAKVPLSERMADVLISKDRWKDDEEGYLKVKYGLEIILIN VMKFALVYGIALVTGLLLQTVTVHLSYLWLRRYSFGLHATKTLNCTLISLLMFVLAPF VFQNIPSNNWIVLGTFGFILLNMFLFAPADTESLPLIGEEHRKTLKRKAMIGTLILTG IALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE" misc_feature 51775..52386 /locus_tag="lmo0048" /note="accessory gene regulator ArgB-like protein; Region: PRK01100" /db_xref="CDD:234898" regulatory 52357..52362 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0048" gene 52373..52534 /locus_tag="lmo0049" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985690" CDS 52373..52534 /locus_tag="lmo0049" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0049" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463582.1" /db_xref="GeneID:985690" /translation="MKNMNKSVGKFLSRKLEEQSMKVADSSMSKACFMFVYEPKSPFV KMQEKNENK" misc_feature 52400..52498 /locus_tag="lmo0049" /note="cyclic lactone autoinducer peptide; Region: quorum_AgrD; TIGR04223" /db_xref="CDD:275064" regulatory 52618..52623 /regulatory_class="ribosome_binding_site" gene 52630..53925 /locus_tag="lmo0050" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985694" CDS 52630..53925 /locus_tag="lmo0050" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="NP_463583.1" /db_xref="GeneID:985694" /translation="MFSILMAIIQITGIFIAIQILTNKVFSIKEGLVTIAIAMLAFPL FTLVQYWSMIFVLIVFVSALYWKNKNVVVSASITLVVIILLTISDSIVGFILVPGLNF KYDEIFNELLPTLIYCAGMLANLLVFSFLLRKLIEKVNISRFVEHRKYAYIIFSIVAL TVLAFYMNIYAGSIAGFDGSVLKINTLIFTGYTILLIVIVTVVINTATNELKVQNQKE QLEQLQDYVTTLESLHREMRVFRHDYVNILSTLVGYIDNNDMPGLKYYFENNIVPINK TIESNNYKISLLQNIHVIELKGLLAVKLIRAQELKIDAILEVVEPIDKISMDSIDLCK VVGILLDNAVEAALTCENPVIRIAFVKKGDSIIIVFANSLPVNMPPIYKIFEEGFSTK GEGRGLGLASLREIMKKYSHVALDTKVTDREVIQELEIM" misc_feature 52858..53859 /locus_tag="lmo0050" /note="Sensor histidine kinase DipB regulating citrate/malate metabolism [Signal transduction mechanisms]; Region: CitA; COG3290" /db_xref="CDD:442519" regulatory 53933..53938 /regulatory_class="ribosome_binding_site" gene 53944..54672 /locus_tag="lmo0051" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985847" CDS 53944..54672 /locus_tag="lmo0051" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="response regulator" /protein_id="NP_463584.1" /db_xref="GeneID:985847" /translation="MLPVFICEDNRMQRERLTKYIEDYIMVEHFDMKLELSTGDPFEL VSRMPTHQGMGLYFLDIDLGQPDMNGFELAQEIRKFDPRGFIIFITTHAELSYMTFTY KVEALDYIIKDDIDLLHDRVLACMKQAEERISNDQDMQKYFTFKVSDKKIIHELLDDI LFFETAPTIHKVILHGKNRQVEFYGKLKNIEKMLDESFYRCHRSYIVNKKNIHELDTT KGVVKMSNGENCYASSKLIKSLSL" misc_feature 53944..54663 /locus_tag="lmo0051" /note="DNA-binding response regulator, LytR/AlgR family [Transcription, Signal transduction mechanisms]; Region: LytT; COG3279" /db_xref="CDD:442510" regulatory 54675..54702 /regulatory_class="terminator" regulatory 54825..54830 /regulatory_class="ribosome_binding_site" gene 54839..56812 /locus_tag="lmo0052" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986050" CDS 54839..56812 /locus_tag="lmo0052" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463585.1" /db_xref="GeneID:986050" /translation="MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGI ILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYKIEWVNPF MSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLY DRTEYYDLNKKFQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHR IYLKRISTDRFMAFLTEEMLKRLEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDL IQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKRTRVRARVISQALQE LITQSDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEI EEYPNVIKNIVTPQVALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRS EEFVGSPVLVYIEPYASSTAELITELFEYQPDLEQVGKIEATALLSGIVVDTKNFTLR TGSRTFDAASYLRSLGADTILVQQFLKEDITTFTQRSRLVESLEIYHDGMAIATGHED EEFGTVIAAQAADTMLSMEGVQASFVITLRPDKLIGISARSLGQINVQVIMEKLGGGG HLSNAATQLKDVTIAEAEKQLISAIDAYWKGET" misc_feature 54839..56806 /locus_tag="lmo0052" /note="Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction mechanisms]; Region: GdpP; COG3887" /db_xref="CDD:443095" regulatory 56800..56805 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0052" gene 56815..57261 /gene="rplI" /locus_tag="lmo0053" /db_xref="GeneID:986067" CDS 56815..57261 /gene="rplI" /locus_tag="lmo0053" /experiment="EXISTENCE:[PMID:19448609]" /note="in Escherichia coli this protein is wrapped around the base of the L1 stalk" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L9" /protein_id="NP_463586.1" /db_xref="GeneID:986067" /translation="MKVIFLKDVKGKGKKGETKNVADGYANNFLIKNGYAVEANNAAL STLSAQKKKEDKLAAEELAEAKALKEKMENLTVELKAKSGEGGRLFGSITSKQIAQTL EKTHGIKIDKRKMDLPEAIRALGHTKVPVKLHHEVTATLDVHVSEE" misc_feature 56815..57258 /gene="rplI" /locus_tag="lmo0053" /note="Ribosomal protein L9 [Translation, ribosomal structure and biogenesis]; Region: RplI; COG0359" /db_xref="CDD:440128" regulatory 57272..57277 /regulatory_class="ribosome_binding_site" gene 57286..58638 /gene="dnaC" /locus_tag="lmo0054" /db_xref="GeneID:986068" CDS 57286..58638 /gene="dnaC" /locus_tag="lmo0054" /experiment="EXISTENCE:[PMID:19448609]" /note="unwinds double stranded DNA" /codon_start=1 /transl_table=11 /product="replicative DNA helicase" /protein_id="NP_463587.1" /db_xref="GeneID:986068" /translation="MDNNFQDRTPPQNIEAEQAVLGAIFLEPNALITASEILMPDDFY RTGHQIIFETMLDLNDHGKAVDVLTVYEALAAKGNLEDAGGLPYLTELSGAVPTAANL EYYAHIIEDKALLRRLIRTATQIATDGYSREDELDMLMDEAEKSILEVSQRKNVGAFK NIKDVLVKTYDDIEILHNRKGDITGIPTGFNELDKMTAGFQRNDLIIVAARPSVGKTA FALNIAQNVATKTDENVAIFSLEMGAEQLVMRMLCAEGNINAQNLRTGALTSDDWQKL TIAMGTLSNSGIYIDDTPGVRVNEIRSKCRRLKQETGLGMIVIDYLQLIAGSGRGGEN RQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADI VAFLYREDYYDREGENDGTIEIIIAKQRNGPVGDVKLAFVKEYNKFVNLEVRYDDAMA " misc_feature 57286..58626 /gene="dnaC" /locus_tag="lmo0054" /note="replicative DNA helicase; Provisional; Region: PRK05748" /db_xref="CDD:180232" regulatory 58647..58694 /regulatory_class="terminator" regulatory 58884..58889 /regulatory_class="ribosome_binding_site" gene 58897..60189 /gene="purA" /locus_tag="lmo0055" /db_xref="GeneID:986069" CDS 58897..60189 /gene="purA" /locus_tag="lmo0055" /EC_number="6.3.4.4" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis" /codon_start=1 /transl_table=11 /product="adenylosuccinate synthetase" /protein_id="NP_463588.1" /db_xref="GeneID:986069" /translation="MSSVVVVGTQWGDEGKGKITDFLSENAEAIARYQGGNNAGHTIK FDGVTYKLHLIPSGIFYKEKISVIGNGMVVDPKALVEELKYLHDKGVDTSNLRISNRA HIILPYHIRIDEADEERKGANKIGTTKKGIGPAYMDKAARVGIRIIDLLDKETFKEKL EHNLGEKNRLLERFYELEGFKLEDILDEYYEYGQQFKEYVCDTSVVLNDALDDGKRVL FEGAQGVMLDIDQGTYPFVTSSNPIAGGVTIGSGVGPSKINHVVGVAKAYTTRVGDGP FPTELFDSIGDTIREVGHEYGTTTGRPRRVGWFDSVVVRHARRVSGLTDLSLTLLDVL TGIETLKICVAYKLDGKTITEFPASLKDLARCEPVYEELPGWTEDITGVTSLDDLPVN CRHYMERIAQLTGVQVSMFSVGPDRAQTHVIKSVWRLA" misc_feature 58897..60177 /gene="purA" /locus_tag="lmo0055" /note="adenylosuccinate synthetase; Provisional; Region: PRK01117" /db_xref="CDD:234904" misc_feature order(58927..58950,59008..59022,59272..59280,59560..59565, 59575..59577,59605..59610,59710..59715,59785..59796, 59800..59802,59806..59808,60049..60051,60055..60057, 60067..60069,60130..60141) /gene="purA" /locus_tag="lmo0055" /note="active site" /db_xref="CDD:349762" misc_feature order(59104..59106,59197..59199,59203..59205,59242..59244, 59269..59271,59293..59295,59302..59328,59332..59334, 59506..59511,59518..59520,59581..59592,59596..59601, 59605..59607,59611..59613,59629..59634,59638..59643, 59650..59655,59842..59844,59851..59862) /gene="purA" /locus_tag="lmo0055" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:349762" regulatory 60205..60244 /regulatory_class="terminator" regulatory 60492..60497 /regulatory_class="ribosome_binding_site" gene 60506..60799 /locus_tag="lmo0056" /db_xref="GeneID:986070" CDS 60506..60799 /locus_tag="lmo0056" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="heat shock protein" /protein_id="NP_463589.1" /db_xref="GeneID:986070" /translation="MSGQIRMSPSELRDRAKTYGQSGRDIEDILSRLSQLQEQLRSEW EGQAFMRFDDQFEQLKPKVTEFANLMDQINDQLEKTANAVEEHDQQLSQNFGF" misc_feature 60515..60784 /locus_tag="lmo0056" /note="WXG100 family type VII secretion target; Region: WXG100_ESAT6; TIGR03930" /db_xref="CDD:274862" regulatory 60853..60885 /regulatory_class="terminator" regulatory 60933..60938 /regulatory_class="ribosome_binding_site" gene 60948..64154 /locus_tag="lmo0057" /db_xref="GeneID:986071" CDS 60948..64154 /locus_tag="lmo0057" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463590.1" /db_xref="GeneID:986071" /translation="MKKVKWSILLFLVLAIFLSAGITYLALNQSSNKESKNNSEKTHK MTIALVNEDQGDNFQGKQVEFGNQFVKSIEKDDTHEWYVVSRGVAESGLKRDVYNMMI VIPSDFSEKAMSMTSSAPEKVTISYKVNDVGNSDLKAEAEKTAASVLEDFNSRIIDVY FASILTTLQEAQDNIGTLVKEEKKYDAIYNKDVNNPLSSYTKQFKTVQDYTGTSKESF QGFQDIMKEFEESLNLSQKENEEHMKNMDAYTKTQEENAPFGAEFTENLSKFDGTLSA EDIRMQTAALEQVNAKMTSEFQILENSNSLLSQTQALQSYIAETNARIDAVDAEIMGT LENDFRTAVYNDLLRILQENEYSDKLNEIGLKDLTGEDINAGFNKMIVKEIQSLPTYN ADQLASIGLDEEMYKNVVTLSKEYYSNHRGAFSEGFSFTTDPKTLPTDTLKSDTINRL KSEGVALESSSYTVEGSDYPTEIILTLDENFTFSDVDCLVNGSSNPELVQQNAYGENG IKLSIQALGSTPAEIKITGKAKLREGVNVPLIGAVNWNATLQQYEKKEYSEMPTIPSE LDPTTPDTSLIVRKEPVPIKVTAPTYLNETKSSVKAITNTVKDYYKLQALFDLYYGID ASDSGQIPDFSNYQVTLENSAKASSYYYIFNKEDVIGSFVNLTTDRFVADYTKKIKAF EKRIDDYKNTMAEANSRSEDVTNRLNETTQEAINLNTNLALTLQNLESWREESKGLIE ENGVVLEKSGEEATMALQLSSEFAGLLAESESLAGTSEGNLKSAEVVYKTFDAIDKEA KNIQQSGETLVKEASTLSDDLSEKLEDDETFQKNFAKVMENSRVGDRQNENLYSFLSS PVDKMNAGTIVAGDKSMPYFMILICTILAIFTSYVISHQEKKREQLNEFEKEMSLVFK NIPITFLAICVGIIEGLIIGAISGFIFEVGEIGMFLWIGVCVLIMMTLVTAFSYLLRQ FNMIGMSIILLVLSLYLFLTDAVGLNIDNESIFATFRTFSPLQYMEYLLNGILSAQKD YIIVVYSLIGATVVFTGLNLFVWHRSKEKVEEDDSDEI" misc_feature 60972..61559 /locus_tag="lmo0057" /note="type VII secretion protein EsaA, N-terminal domain; Region: T7_esaA_Nterm; TIGR03929" /db_xref="CDD:274861" misc_feature 63660..>64103 /locus_tag="lmo0057" /note="Domain of unknown function (DUF4203); Region: DUF4203; pfam13886" /db_xref="CDD:464018" regulatory 64129..64134 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0057" gene 64144..64659 /locus_tag="lmo0058" /db_xref="GeneID:986073" CDS 64144..64659 /locus_tag="lmo0058" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0058" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463591.1" /db_xref="GeneID:986073" /translation="MKYKIVALLMLLCFAFAPGVLAADSDSYLENNGKMDIKTDRLQK TEEEKTKELEQMEETELDKNGIPLFTDEMDEKIAKEKAAEKAEYDRIKDSLFEEESTS GETVKKTKEKLFTGEYETTAVNTETPTTTETTVEDETKKTKQKTVGGAIAGTLVALAG GIYVAARNVFE" misc_feature 64204..64656 /locus_tag="lmo0058" /note="WXG100 protein secretion system (Wss), protein EssA; Region: EssA; pfam10661" /db_xref="CDD:287614" regulatory 64666..64671 /regulatory_class="ribosome_binding_site" gene 64677..64928 /locus_tag="lmo0059" /db_xref="GeneID:986184" CDS 64677..64928 /locus_tag="lmo0059" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463592.1" /db_xref="GeneID:986184" /translation="MAKNTHMNVTVDFTNWGASKYDLRIPVHQPIKALIINLAETLKI DYKDLSKCTIKTTNKAILLSDDDKLTNFQIADGDILEIL" misc_feature 64692..64925 /locus_tag="lmo0059" /note="ESX protein secretion system component YukD [Intracellular trafficking, secretion, and vesicular transport]; Region: YukD; COG5417" /db_xref="CDD:444170" regulatory 64935..64940 /regulatory_class="ribosome_binding_site" gene 64950..66146 /locus_tag="lmo0060" /db_xref="GeneID:986285" CDS 64950..66146 /locus_tag="lmo0060" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463593.1" /db_xref="GeneID:986285" /translation="MNKTIEMDGTTYDFTYEDLVWSITFPKSKTRAKELAQLELLEKP ATHFTPAKISSDSDSYTISYEIAPRTYGFEQVRKMGREDKLRALRNIADLGELLNTRY TFFLHPDNLIFDINLVPSIVHRGIKNILPPYELTEETFFKQYQCFVIAMFSKKFSFEN LYNGSLSGARGTQFEKSILDAKTVQDIATILEEAYMKEHAAVQKNMASVPKKKYSTFR GLAVGFIIVAILLAIPVSYFAFVKVPLQNDLLTANENFLKTDYDKVITGLENVDPEKM PQSVQYELAYSYVKGEKMSDKKKENIMNTISLKSDAKNLLYWIYNGRGEFSKSLDIAK LLDDPTLAMYSLTKQIEQVQSDTTLSGDEKVEKLKTLEESLKEYDEKVNESTTTEDET TNTEAK" misc_feature 64950..66098 /locus_tag="lmo0060" /note="ESX protein secretion system component YukC [Intracellular trafficking, secretion, and vesicular transport]; Region: YukC; COG4499" /db_xref="CDD:443585" regulatory 66146..66151 /regulatory_class="ribosome_binding_site" gene 66160..70656 /locus_tag="lmo0061" /db_xref="GeneID:986287" CDS 66160..70656 /locus_tag="lmo0061" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463594.1" /db_xref="GeneID:986287" /translation="MNREALLIVSNGQQCHKNHLSPEKVVTIGNTIEHEITYPELAES IEVKYDEGSWNAGTTALQANQAVNVENLAFYLCQDLHTQVYDVVTNISVTFGVGIEND VTLDDTKSDFILLRDAKEKLFKLQVLNGEVYHNFSLVTEDCVLEPGDQLYTDGVTITI GKEDISVLAVKNRVTSKLAPLFAADNSFGEDYPDYHRSPRIIYRAPEEKISMAKPSSK PSKPTDGLIKIILPPLIMVAITVMISIFQPRGLYIIMTIAMSAVTITMAILNYIKSRK KYKIDSKQRVESYDLYLKRKTKELHETSEKQRHALTYHYPDVTELEKMALRVDSRIYE KTMFHHDFLTFRVGRGDETSSFSVEFQQEEFSQEKDELVEEAVKIKGQYLSINEVPVA TDLMHGPVGYIGPRRLVLEQLQMLVMQTSLFHSYYDLQFITIFPEEEKADWDWMRWLP HANMRDVNVRGFVYHERSRDQVLNSLYQILKERKQALTEQASKQEKLYFTPHYVVLIT DEKLVLDHTVMEFFNEDPSELGVSLVFVQDVMESLPEHVKTVVDIRDAKSGNIILEQG DLVNRAFVPDHLPADFDKEVISRALAPLNHLQNLKNSIPESVTFLEMYGVERVEELNI AGRWAKNETYKSLAVPLGLRGKDDIVQLNLHEKAHGPHGLVAGTTGSGKSEIIQSYII SLGVNFHPYEVAFLLIDYKGGGMANLFKNMPHLLGTITNLDGAQSMRALASIKAELQK RQRLFGEHDVNHINQYQKLYKQGKATEPMPHLFLISDEFAELKSEQPEFMKELVSTAR IGRSLGIHLILATQKPSGVVDDQIWSNSKFKLALKVQNASDSNEILKTPDAAEITLPG RSYLQVGNNEIYELFQSAWSGADYVPDKESTDYIDTTIYAINDLGQYDILTEDLSGLD KKDDLTKLPSELDAVIDHIHEYTEASGIEALPRPWLPPLEEQIFLPELHQVITDELWS GEKQPLQATIGFLDIPQMQAQEPLTIDLAKDGHLAVFSSPGYGKSTFLQTITMDLARQ HNPERLHIYLLDLGTNGLLPLKKLPHVADTIMVDEEIKIGKLIRRLTLELKERKQKLS KYGVASISMYEKASKEEVPAILLVIDAFDSVGEAPYKDVFEKLIAQIAREGASVGIHL VMSAVRQNAIRVQMLASIKHQIPLFMIEPGESRSIVGKTDLTIEELPGRGLVKLEEPT VFQTALPVCADGTLEIIEKIQAESEAMSSEWNGSRPAPIPMVPEVINMLEYLENKQVQ KSLSEGKTPIAVDFEDVLPVNLDVQTDGNTLVLTDNADVLERTMVSLTELIGQNMEVD IALYDNSSNRFQQYRNNVNIYAGEETAMNSTSEQIVSVLEAREDGWKEIQRASNGEIT LKMYVEELRPMYVLLTDSIYAAEQMSLEARKNMVRLIENGPKLGIYFVTGSQTGILYR ARDEISGELRKQKTGILLGRISDQNILSLINNIYKEALLAPYEAYYIKQGQYEKIKLI APNQ" misc_feature 66175..66483 /locus_tag="lmo0061" /note="DNA transporter; Region: FtsK_SpoIIIE_N; pfam12538" /db_xref="CDD:372173" misc_feature 66727..70638 /locus_tag="lmo0061" /note="type VII secretion protein EssC, C-terminal domain; Region: T7_EssCb_Firm; TIGR03928" /db_xref="CDD:274860" regulatory 70662..70667 /regulatory_class="ribosome_binding_site" gene 70676..71071 /locus_tag="lmo0062" /db_xref="GeneID:986293" CDS 70676..71071 /locus_tag="lmo0062" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0062" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463595.1" /db_xref="GeneID:986293" /translation="MGLTDFWKTPTEKKRDEYDKLHDYLKDALKKHDEKMAEVKSDLS AYKKGMPDMPSKGIPANPFVEKNEKVLEQLEKYIDKEKDKRASLKSAIDTAYRKYLEY KALAIKEEKAEQAKKEKEKKEREERLKNG" regulatory 71049..71054 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0062" gene 71064..71363 /locus_tag="lmo0063" /db_xref="GeneID:986361" CDS 71064..71363 /locus_tag="lmo0063" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0063" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463596.1" /db_xref="GeneID:986361" /translation="MGNVKIDAAKVAEAKKSAAIVEKSLESTHKKCKSVISYVEGASW SGKSRDAFLTFMELIEKYHADVKKNYKKQKKALTALEDYVEDFENTSYSKDVKRL" misc_feature 71070..71327 /locus_tag="lmo0063" /note="Proteins of 100 residues with WXG; Region: WXG100; pfam06013" /db_xref="CDD:428722" regulatory 71344..71349 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0063" gene 71360..72061 /locus_tag="lmo0064" /db_xref="GeneID:986373" CDS 71360..72061 /locus_tag="lmo0064" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0064" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463597.1" /db_xref="GeneID:986373" /translation="MTVETIDVFSPVELYLLLSPIEAQHLFGVPDKLTFLLKGEDVFA EGFDRLKSKGILNEAGELTDGGGFLIDSLIEYYQSKKYVRMNQLMFAFLEKTPNELLV MIEITPQKEYRFERMNKIYALEMIKDFFPLIRREPGERETEFLKEELTNEERKRATAF DPEKNFISMEFFHVDEEPKEKNNAKYYKQYLAFEMEDKLMMVDVVNDTYYRGSQYALL KLLFDELEFPYEEAK" misc_feature 71366..72055 /locus_tag="lmo0064" /note="Domain of unknown function (DUF5081); Region: DUF5081; pfam16887" /db_xref="CDD:318977" regulatory 72048..72053 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0064" gene 72062..72394 /locus_tag="lmo0065" /db_xref="GeneID:986383" CDS 72062..72394 /locus_tag="lmo0065" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0065" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463598.1" /db_xref="GeneID:986383" /translation="MAQQTMGGAGAASTIDINPDEMTHIAKELLAIANEFEGVIKPAV NQLKANKYLTKGKAKKAMDKVPKANERVMELQDQYNMASSVVFDILQTMVDADRDIAE KIIAALEV" regulatory 72394..72399 /regulatory_class="ribosome_binding_site" gene 72408..74222 /locus_tag="lmo0066" /db_xref="GeneID:986392" CDS 72408..74222 /locus_tag="lmo0066" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="toxin" /protein_id="NP_463599.1" /db_xref="GeneID:986392" /translation="MKEVNYREDDWREAKSALAPFAAANWVGGLFNNLEKVSKNMEEA EEDVQELDSDHAISFQHTNYRGKYSAIEDDLMVLYKFSCHAGEKMETLVDQPFYEKLD AFVDGMQDLSISTYSTTNRIGAKSKQTYTTTSGGSQVIESIKEGATIEDLMNGDNFYA NQMQLQYRDWQRANPDQDVSKKDFQMGMLHSRAFEYKSIKDEQQEKEFWVNIVATVVI VGVSIFCPPAGLALAVGYGSLEAGSAISGKDWVSGRELSTEERALRGGLALLDIVPGV KALSTGAKAASAGSKLVRVGDNVLAGSKNVGKGTIDNGIQAGKQAMDLRLANAKKVSE AVQKKLTKDLDDIGTMAKTIQNKTKETFTLPPREQLAFARGGSIPEQSATGAAAIAAK KKLKDIMQNMDNLNVKGGGKDDIIEQNKSLKFTSLEESEKWGIDGFSVWRNSLSSREI QAIRDYTDIWHYGNMNGYLRGSVEKLAPDNAERIKNLSSALEKAELPDNIILYRGTSS EILDNFLDLKNLNYQNLVGKTIEEKGFMSTTTISNQTFSGNVTMKINAPKGSKGAYLA HFSETPEEAEVLFNIGQKMLIKEVTELNGKIEIIVDLL" misc_feature <73137..73280 /locus_tag="lmo0066" /note="Pre-toxin TG; Region: PT-TG; pfam14449" /db_xref="CDD:433960" misc_feature 73695..74219 /locus_tag="lmo0066" /note="A family of actin-ADP-ribosylating toxin. A member of the Bacillus-prodiced vegetative insecticidal proteins (VIPs) possesses high specificity against the major insect pest, corn rootworms, and belongs to a classs of binary toxins and regulators of...; Region: VIP2; cl00173" /db_xref="CDD:469640" misc_feature order(73773..73775,73815..73817,73917..73919,74016..74024, 74133..74135,74160..74162) /locus_tag="lmo0066" /note="active site" /db_xref="CDD:238144" misc_feature 73815..73817 /locus_tag="lmo0066" /note="conformational flexibility of ligand binding pocket [active]" /db_xref="CDD:238144" misc_feature order(74118..74120,74127..74129,74133..74135) /locus_tag="lmo0066" /note="ADP-ribosylating toxin turn-turn motif [active]" /db_xref="CDD:238144" regulatory 74226..74231 /regulatory_class="ribosome_binding_site" gene 74239..75228 /locus_tag="lmo0067" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986401" CDS 74239..75228 /locus_tag="lmo0067" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dinitrogenase reductase ADP-ribosylation protein" /protein_id="NP_463600.1" /db_xref="GeneID:986401" /translation="MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDRE YLKQNPIVEMIGYGTYNQPKGTWSDDSSLTFALMESLISGYDINRIVNNMVSFMDDGF WTPYGEVFDIGSVTRESLNRYKNGVSVFECGGKDNFDNGNGAIMRIMPLVFYLGKDFS FGKKNKITEEVTRITHAHPRSILGSYVYIELLQNLFANMDKKLAYEEMQNYIRKNYSD YPFKDELQYYNNILEGNLYELKESNIKSSGYVVDTLEASIWAFLTTNSYKEAVLKAVN LGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKEDILNLCNRFIESLIKQ" misc_feature 74287..75210 /locus_tag="lmo0067" /note="ADP-ribosylglycohydrolase [Posttranslational modification, protein turnover, chaperones]; Region: DraG; COG1397" /db_xref="CDD:441007" regulatory 75328..75333 /regulatory_class="ribosome_binding_site" gene 75342..75665 /locus_tag="lmo0068" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986408" CDS 75342..75665 /locus_tag="lmo0068" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0068" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463601.1" /db_xref="GeneID:986408" /translation="MIDELKKYKKIIEDAVDLLGYTPLRYAIFEGEKNNRIEYQVRIE YIENHYEVYTTGERASISGKKQFENFFEAYHNFLFKLQLSILQNRRRVRDGEPPEYFC ALWEK" misc_feature 75354..75659 /locus_tag="lmo0068" /note="Immunity protein 59; Region: Imm59; pfam15597" /db_xref="CDD:434803" gene 75832..76125 /locus_tag="lmo0069" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986411" CDS 75832..76125 /locus_tag="lmo0069" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0069" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463602.1" /db_xref="GeneID:986411" /translation="MTVTSNINSELADGFQGYTDVRKITVNSTVDVGVSGSLTAVLGQ VGSSFGLPGAIGGLGVGLVLDTILSLNGTKDTWKNSINEKMQDLEDWFRVEAK" regulatory 76249..76254 /regulatory_class="ribosome_binding_site" gene 76262..76984 /locus_tag="lmo0070" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986434" CDS 76262..76984 /locus_tag="lmo0070" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0070" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463603.1" /db_xref="GeneID:986434" /translation="MKKNLEQIYAIEFTMGLRYRPMQIRHNIKLIFLLLLFVTWLQGD FMNRLPGNLDITKVDMPLVLLALLCYIILYPQKMTIRFQNLQYLLYICCFQFLVFMVI RYFYSNLIYGIQNMVSLTAQTLVASYVFLLVLWILALIFFYFHFRKKLRNGDYRKDSE LQKKRSNLGLKLSKGSYILIGAFFVFILSSQIVGGIMVDIMIISIEIVGIALCSMGIV IFPEQLFTAYCKFKFKEFHIEE" gene 77149..77406 /locus_tag="lmo0071" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986441" CDS 77149..77406 /locus_tag="lmo0071" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0071" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463604.1" /db_xref="GeneID:986441" /translation="MAEVDKSTIGEVEGVTFQSYFLIKNMLHTRVVGDLEKRLPVTLE KMVEYVESNRKEIITPIFIVLNYVGNVPYVDVYVGIDPYDE" misc_feature <77185..77391 /locus_tag="lmo0071" /note="Domain of unknown function (DUF5085); Region: DUF5085; pfam16895" /db_xref="CDD:435635" gene 77863..78066 /locus_tag="lmo0072" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986445" CDS 77863..78066 /locus_tag="lmo0072" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463605.1" /db_xref="GeneID:986445" /translation="MKLPPEADYLNDETLEVYENDKKKYDQTNQLITNNSVTILLGDF CYYESAWSSRWRDNRFWIGSKVS" regulatory 78077..78082 /regulatory_class="ribosome_binding_site" gene 78090..78374 /locus_tag="lmo0073" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986452" CDS 78090..78374 /locus_tag="lmo0073" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0073" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463606.1" /db_xref="GeneID:986452" /translation="MKIDLEQIYILDFTMGLRFHPLIIRKNLPLLYVAFIFLIWIQGV VMAGLPGDFDTTELDVLLAAIPALPLLILYPKKMAMKFQNVQYLLYVCFN" gene 78362..78811 /locus_tag="lmo0074" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986466" CDS 78362..78811 /locus_tag="lmo0074" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0074" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463607.1" /db_xref="GeneID:986466" /translation="MFQLMIFMIIRVFYFAIFYLLENEILVTAQFITNAYITLCIIWV ISFAIFSFRFKKKLDKGGYRKDSKLQQKRSNLGLNLSKGTYFLILGSFGLFILIRMLI GGELEEIIISLFLIVCILIGIAGVSLFPEHLFTAYCKFNFKEFHIEE" regulatory 79033..79038 /regulatory_class="ribosome_binding_site" gene 79047..79820 /locus_tag="lmo0075" /db_xref="GeneID:986472" CDS 79047..79820 /locus_tag="lmo0075" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carboxyphosphonoenolpyruvate phosphonomutase" /protein_id="NP_463608.1" /db_xref="GeneID:986472" /translation="MTKNFKKLKSLHELPTPLILYNCWDVASARAIQQGGAPVIATSS YAIAESLGAVDGEHLTFDEMFSVISRIAENVSLPLTVDIETGYARNLEELAQNVERLL AIGVCGVNLEDQLIGVTNPGLCSTEEQCDKIKTIKETAAKMSTEIFINARTDVFFQGR DEAVDLVEEAISRANAYKEAGADAIFIPGLLSPNLIRAFVEKSPLPVNVMRMDGMLSN EDLQKIGVKRISYGPFSFFQANLAIQQEVERIFEGGKAL" misc_feature 79068..79799 /locus_tag="lmo0075" /note="Phosphoenolpyruvate phosphomutase; Region: PEP_mutase; pfam13714" /db_xref="CDD:433424" regulatory 79802..79807 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0075" gene 79817..80869 /locus_tag="lmo0076" /db_xref="GeneID:986519" CDS 79817..80869 /locus_tag="lmo0076" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="O6-methylguanine-DNA methyltransferase" /protein_id="NP_463609.1" /db_xref="GeneID:986519" /translation="MITNQRDIDKYYDMLVEKNSNYEGVFFVGVKTTGILCRPTCPAK KPLKENCEFFSTAKEALLASYRPCKRCEPLSNPTKLSPAVKLLVDAIEKNPEKKWTDK DFDDLSISANTARRQFKKQFGMTFIEYARSRRLGLAFKHIRGGNSIINAQLDSGYESG NGFRDAFSKTMGEVPHKSKDITILYSAWLETKLGSMLAISDDDSLLLLEFVDRKGLET EIKKLRMRLNAAITPEKTIIIQQIEAELAQYFNGELIDFKTPIRYIGSDFQENVWEEL RRIPIGETISYKGLAEKLGRSTASRAVARANGANQLSLIVPCHRVINTNGALGGYGGG LARKEWLIKHEKMVPK" misc_feature 79817..80851 /locus_tag="lmo0076" /note="Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains [Replication, recombination and repair]; Region: AdaA; COG2169" /db_xref="CDD:441772" regulatory complement(80850..80885) /regulatory_class="terminator" regulatory 80854..80891 /regulatory_class="terminator" gene complement(80892..81530) /locus_tag="lmo0077" /db_xref="GeneID:986552" CDS complement(80892..81530) /locus_tag="lmo0077" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463610.1" /db_xref="GeneID:986552" /translation="MKKITAPRIPDGDLTVYPNDTYFIEDIGEVSEQIFRKTTLTGEI FEHFHLETIIFDGCVFDSVSLVSANLTDVVFKNCDLSNLDLMGAIIHRVRFENCKLIG MNFSDATLRNCVFVDCYADYVAFRYANLKWVAFEAGAYTNSDFSGAQLVDTYLERLDL NKAQFLNCALNGIDLSSCIFESITAMPQDLKGMSIDFSHAPALMPLFGIRVK" misc_feature complement(80895..81446) /locus_tag="lmo0077" /note="Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; Region: YjbI; COG1357" /db_xref="CDD:440968" regulatory complement(81539..81544) /regulatory_class="ribosome_binding_site" regulatory 81648..81653 /regulatory_class="ribosome_binding_site" gene 81661..82617 /locus_tag="lmo0078" /db_xref="GeneID:986565" CDS 81661..82617 /locus_tag="lmo0078" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoglycerate dehydrogenase" /protein_id="NP_463611.1" /db_xref="GeneID:986565" /translation="MTASVFVAGKLLPETMEALSKWDVKAFSGEENITEAELINNVTE VDAIICPLSSPISAKVLESAKNLKIVANIGAGFDNIDVKKAQELGIAVTNTPDVSTEA TAELTLGLILDVARRISEGDRLCRETPEQFKGWAPTFFLGTELSGKTLGIIGLGRIGQ AVAKRAAAFGMNIIYSGHQPKEAAKEWNAEFVSQKELLKRSDVVTIHAAYSPSLKHLL NETTLKTMKSSAFLINAARGPVVEEAALIKALETGVIAGAALDVFEFEPKIGEDFAKL DNVVLTPHIGNATVETRAAMGKIAIANVEAVLAGKAPLHSVY" misc_feature 81667..82614 /locus_tag="lmo0078" /note="Putative D-isomer specific 2-hydroxyacid dehydrogenases, NAD-binding and catalytic domains; Region: 2-Hacid_dh_13; cd12178" /db_xref="CDD:240655" misc_feature order(81814..81816,81880..81888,81955..81957,82369..82371, 82510..82512) /locus_tag="lmo0078" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:240655" misc_feature order(81883..81885,81955..81957,81967..81969,82120..82134, 82186..82194,82279..82287,82300..82302,82363..82371, 82441..82446,82510..82512,82516..82521) /locus_tag="lmo0078" /note="putative NAD binding site [chemical binding]; other site" /db_xref="CDD:240655" regulatory 82630..82654 /regulatory_class="terminator" gene 82705..82777 /locus_tag="lmot01" /db_xref="GeneID:3167605" tRNA 82705..82777 /locus_tag="lmot01" /product="tRNA-Lys" /db_xref="GeneID:3167605" regulatory 82946..82951 /regulatory_class="ribosome_binding_site" gene 82959..84437 /locus_tag="lmo0079" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986575" CDS 82959..84437 /locus_tag="lmo0079" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0079" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463612.1" /db_xref="GeneID:986575" /translation="MSRIDIGEIQAFLYQLRATNEPGRKTIQSIKAAVTKYVGDNSLK GKAVDASKNYYQMTYFPLCDAIIEAMDESEERLGQYIQDFHAEVDSSPDAKIDADGLY ELGKMIDRIESKKEALAQRMNSGTEGQMQNYRSQLAIAYKQENILEKYLSFEQSHANF FDHLIDLVQAVQQTIRELQSNIQFNSQTGTYDLSKLNSATVSRMQQALNKSRGIKEDI IKELRDYTVLAVVYLDSNGKEQVMWLLERDGVGVENAELKAYLTENGKYLNPEDYTII TNEELNKKINQSWRDGVYYLNGNKYDGLTGGVLSTSAYVEAGKGYIDKSGFADVVLGL GLSTAAIRGSLVYKKVNGPYKQNIKNRYPNEVQQGKIFDYTLENGQVKIRDGIKEVDF IIDLQGNLKVGRGHAHLSNGGDVQAAGKLKVDSNGNVRRITNESGHYTPTLGQAKNYQ QIFENTGINTKNAWLETYQLDVTKSGYVDLAKLKRIDSVKLK" misc_feature 82962..83531 /locus_tag="lmo0079" /note="LXG domain of WXG superfamily; Region: LXG; pfam04740" /db_xref="CDD:428100" regulatory 84438..84443 /regulatory_class="ribosome_binding_site" gene 84451..84849 /locus_tag="lmo0080" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986576" CDS 84451..84849 /locus_tag="lmo0080" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0080" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463613.1" /db_xref="GeneID:986576" /translation="MSKTTQMNSEIFQINLEKTLKEIMVAKGLQSDEIRFVIVPVEEK GKMLDGSDEMMKRLVLTKENIGNKQLVLKDVVDVLGGLFPKAPIWINVSFLEMNGEKA IFKLETSLRFRKPTLLRNAETGHAPFKAIT" regulatory 85009..85014 /regulatory_class="ribosome_binding_site" gene 85025..85627 /locus_tag="lmo0081" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986577" CDS 85025..85627 /locus_tag="lmo0081" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0081" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463614.1" /db_xref="GeneID:986577" /translation="MFKTIVDTLIAQRRDRKIKESERRQENYRAKRENLTEVYRSLIL IVNLFPNESPTDIIKNIKYGPYYSLENYNGIFRTLDYKIEDYEKRKSFSNLDYEEKND IDIEISNIEYAKDKLARNRKSYQKAVKCFNQFKDSDKAIFDLYAGTHVQNCLVNFEIT INNVFISGMSVGIPDSPYENSIKIASRKLISAMKKDIGIT" regulatory 85892..85897 /regulatory_class="ribosome_binding_site" gene 85902..86228 /locus_tag="lmo0082" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986579" CDS 85902..86228 /locus_tag="lmo0082" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0082" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463615.1" /db_xref="GeneID:986579" /translation="MKKLKQLTNQLFTSTIFLVTMLFIIPPTFAIADGSKVSFYEYIY GAPLRWLTVISTTEKKGAFLEMFFSENEGINIQWLNLIINFLLVFLVITIIFSLAKKF YNKKNA" regulatory complement(86222..86253) /regulatory_class="terminator" gene complement(86323..86691) /locus_tag="lmo0083" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986580" CDS complement(86323..86691) /locus_tag="lmo0083" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="NP_463616.1" /db_xref="GeneID:986580" /translation="MSFSIGEFSELVGIPSSTLRFYEKEGLITPDRDKNNLRTYSEED ANWLKFLLHLKGAGLSIEELKQYTIWRTAGDSTISERLNMLKEKKIVLEQEIENLQKD LDTVVRKIGIYEEKVAKLDV" misc_feature complement(86350..86685) /locus_tag="lmo0083" /note="Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB; Region: HTH_YyaN; cd01109" /db_xref="CDD:133384" misc_feature complement(order(86578..86586,86632..86634,86674..86682)) /locus_tag="lmo0083" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133384" misc_feature complement(order(86383..86388,86395..86397,86407..86409, 86425..86427,86437..86439,86491..86493,86518..86523, 86533..86535,86542..86544)) /locus_tag="lmo0083" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:133384" regulatory complement(86699..86704) /regulatory_class="ribosome_binding_site" gene complement(86747..87730) /locus_tag="lmo0084" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986581" CDS complement(86747..87730) /locus_tag="lmo0084" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_463617.1" /db_xref="GeneID:986581" /translation="MKKRQLGNAGLVTSELGFGCMGLNYHRGPAKDRNEMIEVVRTAM DAGITMFDTAEVYGPYTNEELVGEALVGKRNHVQIATKGGFKINGLNNEVDSRPESIK AAVEGSLKRLKTDYIDLYYIHRIDPSIPIEEVAGTIQNLKQEGKILHWGLSEASAKTI RRAHKVEPLAAVESEYSIWWREAEKEVFPVLEELGIGLVAYSPLGRGYLTGKLDINAD FNANDNRGGLPRFQKEAMEANQVLLDFMKEIADEQNVTTAQLALAWILDQKPWIVPIP GTTRPSRIEENIASTEIHFDDGARQKIADALSQIEIVGDRYSAAENKRIGK" misc_feature complement(86810..87703) /locus_tag="lmo0084" /note="AKR13C family of aldo-keto reductase (AKR); Region: AKR_AKR13C1_2; cd19078" /db_xref="CDD:381304" misc_feature complement(order(86870..86875,86882..86884,86891..86908, 86957..86959,87110..87130,87212..87214,87269..87274, 87359..87364,87485..87487,87560..87562,87575..87577, 87668..87676)) /locus_tag="lmo0084" /note="putative active site [active]" /db_xref="CDD:381304" misc_feature complement(order(87362..87364,87485..87487,87560..87562, 87575..87577)) /locus_tag="lmo0084" /note="catalytic tetrad [active]" /db_xref="CDD:381304" regulatory complement(87739..87744) /regulatory_class="ribosome_binding_site" regulatory 88106..88111 /regulatory_class="ribosome_binding_site" gene 88121..88810 /locus_tag="lmo0085" /db_xref="GeneID:986582" CDS 88121..88810 /locus_tag="lmo0085" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0085" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463618.1" /db_xref="GeneID:986582" /translation="MKYIDYHDYMHKDAIIYAYLQNNFPYIRKRIKAWESFTLDREDI LLVKSGAIFEEVNGKKKGIARCFFSKSLIFPTRDPIVLKAFETSEICFINAERAFGKL EEDQILSNFFLQIAEKNEEDMRRQAFLGTENSKNKIISTLNFLLENNKSNSKTPIFPI WLQINVLAKLANCSISTISSTVNELHAEGILDIKSSPWKLKGKEKKIEILENENQKMK LNERKHKSNVF" misc_feature 88244..88750 /locus_tag="lmo0085" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" regulatory 88873..88878 /regulatory_class="ribosome_binding_site" gene 88888..94767 /locus_tag="lmo0086" /db_xref="GeneID:986583" CDS 88888..94767 /locus_tag="lmo0086" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0086" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463619.1" /db_xref="GeneID:986583" /translation="MKKNILVVIIVSVLAISAIVSAFFLMRDDAYAIETEGFTYSPKG KVVDFSSEAKYNDTWINNEKTITDKKEMKPINLARTLFLKDGRIQFLGKSVAVKSASD LIELPSKTSITESKGSYKAKSDSNKTLAQLPKGTVVKLAEGRYIILDNAYLKNKQGLN KKLPKNVLVSIDENKKVMLMGDKTIEELGGDDAYIEMENNHYHFDLKKEMLVSQTAKE TDIDIRSIKVEIDDNAEKRSLKTAKETEKETTKDSTEKESEKQSNDASGQKSAQNNER SESKDDQTQDASGNNTNGSANNNTARSNGTGGSNSDTNGSQPGGTQNKPNEGDVNKAN EIIKKLNEAENTNTFQVPIVDVNLTVKGQVAAAKLKLTDSSKRLNSLEAILYDSKNNI VKKEKLNSTKANQNFTFNNLKYGETYQVVVQGSYKSASNKNQDTIFFRQTVEAKPVVL TPKVTERGEDYMKAELTATELYGHIDKLVLKIKENNSNVITSQKVTVDASQLTKDGQV EVKFNSLSSDKEYIIEMEELIVDGKNVTDDGWYFISSTLKAKPTIEGLNLSYSTDKGE FVASPVNLVDRDESITSIRYVAYLEDDYKVNGSNAKEYAYSVVDANQKKTAVKVGRTV DMNDGNYIFVGYISGNNGQSDYTFATPASNSVVVGKKTKPTVEFSLKEAEQDKLTINY EVFDADNTLLFDNLTHPTLKLYKSDAQGMYSGNPVATVDLTKKSDITNLLEFDGLESE AYYVVVMTGSYNLDDGAGIMVDELIGQSSVFRTTEITKVNASFSLDSVDTTKVAINVK LSDAAVNLNDANLKIYEKKTNTLVKTVPLHGDFEKLMSDSGNSYLFENLSINKEYLVK VEDGYDSGMNHVPVEGQFIFKTKKESPETDKVLLDYKASEMKLGGLAGIAATEKPLID DYNAVSSITYSIYKADDLNTPLVEQEVSTAADFEKNVYFDLTNKLLGRGYSYVIKADV VWNDNYEDHHIEISSDTIQIKKEKPTVEYEILSRTASEIKLNVYVEDEEESIVPGTLE ITSTTGGNEQLQSGKNNVTLPLSSEGTTTIKTTGDYIITSGSSAISDIFMTKQLAALN TTTPQVGAKIAMDASGKSMTIAPEPNAVAKTSVMRTKYDLKDAASSKPDYSITKSGPN QFNTQNLNLPLGNIWFDNSYQLTLDMKMNYTENKIDNQNLANNYYLSIGNGASFVSSL SGAVSTTNNVNSADVFKVTKASTDLEGNISGVTFKNIWTDKYIAYRNGILISNSETPD SFKLIRQADGSYVPELSGRYVNFSVGLVTDEAAGSKIDLYSTQEKLEQVSEAISVKAL EEPAISAENIGVYDKRVKLDVIGEDKDNTTVKKANKNELFVNVYKADGTTLVNSIRVD GLPTRDVSVTELSPDTDYVVKVEGKYDLLDGNGEKDKVYYSETIKTEKSLPSMTSTDY SWSPAYGQRAIKGKIDFADESSVLTNIEYRLYDAATISSSLSNLVALEQELGNKTPVS TFDNMTNNPEFSIYNGSGTQNFVSGKTYVIAAYMKTSLTRAPIFLSDAKAVYISPPSN VSAPITLENVSTREATLKFSYNDPQSYFVGGTNKDFQYVLKNTTTGTEVKKGSFQGGN TASWINTFEDLEPATGYTLTISTQYDNLNGGLVRAWNTSFNFTTDDEYVTSNSLTIQL DAGAKAVKLQAKEVRPGSTTIENIKMEFYELIDYGGNNERTQLVETKNITLPSSYPAT IAADFNVAGKKKNQSFLGKMIVTYRTPTNEVKTYEKTSNFITLQEDIAAGLKSFKSVR ATNDALEVKLDIPQDNSTDKGSYTYELKNENGDVIDTEKVAAEDISKTVSLSMEPTSN YTLTVINPDNQPVALYQGNNEENNLKAEIKKDSFTLMSNNTADAKTTMTVTVEPKELT AWQTVQSWFGKDFTETYNIQKDELDTGVKIDTNYQDTKVTVEETKSGKNFGIIELEES K" regulatory 94751..94756 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0086" gene 94764..97070 /locus_tag="lmo0087" /db_xref="GeneID:986585" CDS 94764..97070 /locus_tag="lmo0087" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0087" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463620.1" /db_xref="GeneID:986585" /translation="MKPTWKIGIIVAAVPLIIIAVVLWGSFKEARYNLVSLPDDGVVL NNEQETLQFQKGNTLYRSWNSDQLIAKNDKEDTRNEIMESTILYLNKEALMFTKSVPV IDTNGVSSKLKGRQVYQQTNSSYKYKNSEIVENSIVKLANRQYYLNADATLYLGGKEI KKVTKPLLLIDKTGSVTIYENKKKSRFLGHMTLKVNDKTVLDASNETYTVGERKIDLA SFGGTDNEKIVVKEDEKKEDKKKTAESAKKTASNTSQSENESNQTTKGTGNQLNATKK YGNNLNVGNGTSDSEPNDGKDTKNNGSGSNANGGTNQSGLNEIDDYEAVLRKIEDLNK KLERNIPVLRIGYIAPGVTSVKVSYNYADPNNTLIGVTKISAVDEKTGKTVNTQYVSA VDTEATLKGLSPNGKYHLEFTYQYDLGTNKGIQEVKMQSDSFTTQTVAAIYQMQSVTS TTMKVNIALDAQIDDVKRARIKVTKSDGDFFYMNVSANFLNGNGEILNATGLKPSTAY QFQTVIEMKNGETIELNSSEKYYTMQATVLKNLKASQSVNKVLQVQYDWSSADYTLNQ AIIELEDEEDNTEVDYQIVNQEKGNIHLVPDTKSELINLKAKLVLKTTNNNTKESKTF EYPVKQEIEYDKQAKLTMDLTPFQTEENSEAQTEKQDVVAEKETNGNDLTAKMEDVLA PQNATYDMSFSMQRKALETYQLAFERKIAGIDDDNWTMWKSQQVTTDEAGQVKVTETI SKLAKDSFDYRVAVYDAQGALQLYVYQK" regulatory 97113..97118 /regulatory_class="ribosome_binding_site" gene 97127..97369 /locus_tag="lmo0088" /db_xref="GeneID:986586" CDS 97127..97369 /locus_tag="lmo0088" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP synthase subunit C" /protein_id="NP_463621.1" /db_xref="GeneID:986586" /translation="MDLVVACSVIGAALAIGLATLGAAIGQGIAVSRATEIIGKNPNA KKEVMGGLFLGLLMIVALMLFALAIAVILLWVNPFI" misc_feature 97130..97363 /locus_tag="lmo0088" /note="F0F1 ATP synthase subunit C; Provisional; Region: PRK13469; cl00466" /db_xref="CDD:469780" regulatory 97368..97373 /regulatory_class="ribosome_binding_site" gene 97381..98412 /locus_tag="lmo0089" /db_xref="GeneID:986587" CDS 97381..98412 /locus_tag="lmo0089" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP synthase subunit delta" /protein_id="NP_463622.1" /db_xref="GeneID:986587" /translation="MEKMIQTIILYSVFAVGFLYLLHFTLRKLENILTSFFYEVSQDQ SLEKESLLRRLKRQKVATTQEEQKNRQLAIESEQKEVLFLEEIDQLIAQNKSYEQQLQ AWENEQPKQIIEVPTFETTPHAPYKSLSSYINEIFQQVFIESEEDEARLFTEAIREFD ALVRTEKIRCALPYKVILHLFEMYSPEQLHLFAQSFQRYSERSSKLPVKQIYQSSYLS PEQKLKVMQEEGTLDELDAEFIQFLFYMMTHYSYRQTRNLYRNFLEVYNIHFYRGLIC IHVASKGSANHFEKLWQPAHRSYKIEYQVQKELIGGVIIQYGSKSIDMSYQELIKRST EKMEAEVKL" misc_feature <97537..97833 /locus_tag="lmo0089" /note="HpsJ family protein; Region: HpsJ_fam; NF038305" /db_xref="CDD:468465" misc_feature <98002..98391 /locus_tag="lmo0089" /note="ATP synthase delta (OSCP) subunit; Region: OSCP; pfam00213" /db_xref="CDD:459714" regulatory 98396..98401 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0089" gene 98409..99905 /locus_tag="lmo0090" /db_xref="GeneID:986589" CDS 98409..99905 /locus_tag="lmo0090" /EC_number="3.6.3.14" /experiment="EXISTENCE:[PMID:19448609]" /note="produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit" /codon_start=1 /transl_table=11 /product="ATP synthase F0F1 subunit alpha" /protein_id="NP_463623.1" /db_xref="GeneID:986589" /translation="MKTIHFDMNKYETHVDLEYLKEHGRVEKISDGVIFCSGLENAAL HQAVLIDERHRGVILELNEEFVGIGLIDKTNDILEGMHVGVSGKFIEVDLFEEMAGRI IDTTGKMLYEESEEKPTATSPLFCVTPAIMTIDSVTRPLNTGLAVIDSITPIGRGQRQ LILGNRQSGKTQIAVDTIINQHDQNVHCIYVAIGLKAAYIAEVIETLRNHGAMEYSTV VATAASDSLTAQYLTPYAGMALAEALRDQGKDVLIILDDLTKHADAYRAITLLFNRPP GREAYPGDSFYIHSSLLERAVQMNEEHGGGSITAIPMIETLSDDVTAYIPTNVISITD GQLFLKSDLFNRGQKPAVDVGVSVSRIGGDAQHPIIRKLSKNLTLILSQFEELKELLD FGNALDDGSMKMVSDGRLLTELFKQKILSPLSVTELIVILYAFQNGFLTKIPPANIQT FKGLLLEKAHMHKDFESFSAQIEAINELNESHVEMLEEIIRETGRLFS" misc_feature 98409..99902 /locus_tag="lmo0090" /note="F0F1 ATP synthase subunit alpha; Provisional; Region: PRK13343" /db_xref="CDD:183987" regulatory 99888..99893 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0090" gene 99902..100771 /locus_tag="lmo0091" /db_xref="GeneID:986593" CDS 99902..100771 /locus_tag="lmo0091" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP synthase subunit gamma" /protein_id="NP_463624.1" /db_xref="GeneID:986593" /translation="MSSIDQARKTIKALNSTYKIVHVTELATLGKLSALREKAEAAVS YYETILKSLRWVRKTMYTSNNQIKEEKNVTAIAITSERGLCGAYNSEVFAEIDQLIES LGDQVTINWVVVGEQGHRYLTKLGQNITSYLQFSLENIDLETTTAVTADFIDLIHSEQ MDALYVIFTKYLNAVQSEAMCEKIYPEIPEDSDTELIEVDYVLDFETDDEQVEQLLLE NYLCGLLYSMFRYSVASEYCMRRIAMKQAKDNIQKQLEEAIFDARKQALQQKTGELLD IISGAQTIRKDEE" misc_feature 99908..100744 /locus_tag="lmo0091" /note="mitochondrial ATP synthase gamma subunit; Region: F1-ATPase_gamma; cd12151" /db_xref="CDD:213394" misc_feature order(99914..99916,99929..99931,99947..99949,99959..99961, 99968..99973,99977..99982,99989..99994,100145..100147, 100151..100162,100247..100252,100259..100264, 100271..100273,100640..100642,100649..100654, 100661..100663,100679..100681,100688..100693, 100697..100702,100709..100714,100721..100723, 100727..100744) /locus_tag="lmo0091" /note="core domain interface [polypeptide binding]; other site" /db_xref="CDD:213394" misc_feature order(100022..100027,100031..100036,100043..100045, 100052..100057,100535..100537,100544..100549, 100556..100558) /locus_tag="lmo0091" /note="delta subunit interface [polypeptide binding]; other site" /db_xref="CDD:213394" misc_feature order(100256..100258,100289..100306,100544..100546, 100553..100558) /locus_tag="lmo0091" /note="epsilon subunit interface [polypeptide binding]; other site" /db_xref="CDD:213394" regulatory 100758..100763 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0091" gene 100772..102142 /locus_tag="lmo0092" /db_xref="GeneID:986598" CDS 100772..102142 /locus_tag="lmo0092" /EC_number="3.6.3.14" /experiment="EXISTENCE:[PMID:19448609]" /note="produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit" /codon_start=1 /transl_table=11 /product="ATP synthase F0F1 subunit beta" /protein_id="NP_463625.1" /db_xref="GeneID:986598" /translation="MKKHTGTIISISGFVLRIEFNESELPEIGFALEYHTHQGTYLAE VVQHTGINTVSAIAIGEVSGLARGTEVVNLGHPIEVPVGETVQGRMLNVYGKAIDGKP EPAAEVKWPIFRAQPLLRELDTNKEILYTGIKVIDLICPILKGGKTGLFGGAGVGKSV LMQELINNISMLGGNSVFTGVGERVREGIGLYKELEASGVLPQTTVVLGQMNESPGVR MRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQGKIPITGGYQSTLSK EVGDFQDRIASTKNGSITSIQCVFLPADDIDDPSAVATFSHLDSTIVLERSIAALGIF PAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVLGMAELSDEDRKL VHRARKIRNFLSQPFYVSEKFTGTEGTFVEIEDLLGSIERILNGDYDERSERDFLFIG SYKDLK" misc_feature 100772..102124 /locus_tag="lmo0092" /note="FoF1-type ATP synthase, beta subunit [Energy production and conversion]; Region: AtpD; COG0055" /db_xref="CDD:439825" regulatory 102141..102146 /regulatory_class="ribosome_binding_site" gene 102155..102478 /locus_tag="lmo0093" /db_xref="GeneID:986604" CDS 102155..102478 /locus_tag="lmo0093" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP synthase subunit epsilon" /protein_id="NP_463626.1" /db_xref="GeneID:986604" /translation="MKLKIVSPMGQFFEGEVEGFVINTKEGQQTVLEEHIDCLSFFDY SEISILDAVASDPIFVALGYLHLVQNEANIMAQFASADAEQAERIFERLNKRKQTESR RSNDK" misc_feature 102155..102391 /locus_tag="lmo0093" /note="ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Region: ATP-synt_DE_N; pfam02823" /db_xref="CDD:460714" regulatory 102455..102460 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0093" gene 102468..103028 /locus_tag="lmo0094" /db_xref="GeneID:986607" CDS 102468..103028 /locus_tag="lmo0094" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0094" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463627.1" /db_xref="GeneID:986607" /translation="MTSEFFSTLLLIIGLLIGFFLAILLILAGIRRFFCSAEEPLKRI RRYQVWHNRYQFNEEVTSFFTVIGATLLVSLITVQITAIPFQYTVLIFWSSWLFHLLS FWKKIRVPKKMKNEMIQLAGFLLITALYFVGYFAMKSLHFSIIHVADFPGVIQFGIRT YLTICSLFVASGALIVWQRIYVKLLK" regulatory 103065..103094 /regulatory_class="terminator" regulatory 103189..103194 /regulatory_class="ribosome_binding_site" gene 103204..103836 /locus_tag="lmo0095" /db_xref="GeneID:986608" CDS 103204..103836 /locus_tag="lmo0095" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0095" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463628.1" /db_xref="GeneID:986608" /translation="MTFLEFHQLVKEDLLIYSWIIKNFHLTRQKLMAGGEITMNREQV IVMEKGLLVQVNEEGKNDLYRVFIDQRIIFTTKGDITLTALEDTSYSIIRTDELIGKL EDQHLLPTFFLQIAEDFEKGLDWQRTLISVDPAERAEMILVKIIERYEINSENKPEFP RWLRINVLARFAKCSVSTMSSVVNELVNEGDLNIKGTPWLLTRPYQASCA" regulatory 103854..103889 /regulatory_class="terminator" regulatory 104121..104126 /regulatory_class="ribosome_binding_site" gene 104134..105099 /locus_tag="lmo0096" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986611" CDS 104134..105099 /locus_tag="lmo0096" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannose transporter subunit IIAB" /protein_id="NP_463629.1" /db_xref="GeneID:986611" /translation="MVGIILATHGEFAEGILQSGTMIFGEQENVKAITLMPSEGPEDI KAKMEAAIASFDSQDEVLFLVDLWGGTPFNQANGLYELHKDKWAIVAGLNLPMLIEAF SSRFTMESAHEIAANILAPAQEGVRVKPEELQPQVTATEQPQAEIAAVGDGKIEFVLT RVDSRLLHGQVATAWTKATHPTRIIVVSDAVAKDDLRKKLIEQAAPPGVKANVIPVQK MIEISKDPRFGNTKALLLFENPQDVLRAIEGGVEIEQVNVGSMAHSVGKVVVSKVLSM GKDDVETFEKLKEKGVKFDVRKVPNDSSANMEDIIKKAKHELKTQ" misc_feature 104137..105075 /locus_tag="lmo0096" /note="PTS system mannose-specific transporter subunits IIAB; Provisional; Region: PRK15088" /db_xref="CDD:185045" regulatory 105111..105116 /regulatory_class="ribosome_binding_site" gene 105123..105929 /locus_tag="lmo0097" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986614" CDS 105123..105929 /locus_tag="lmo0097" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannose transporter subunit IIC" /protein_id="NP_463630.1" /db_xref="GeneID:986614" /translation="MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNL TACIILGGTLQMIALGWANIGAAVAPDAALASVASAIILVLGGQGVAGIPSAIAIAIP LAVAGLFLTMIVRTLAVPIVHLMDRAAEKGNIRSVEWLHISAICMQGVRIAIPAAALL FIPADSVQSFLEAMPAWLTDGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAA ISQLTLIAIGALGVALALIYLNLSKMGGGNSNGGGGGNSRDPLGDILNDY" misc_feature 105123..105911 /locus_tag="lmo0097" /note="mannose/fructose/sorbose family PTS transporter subunit IIC; Region: PRK15065" /db_xref="CDD:237895" regulatory 105937..105942 /regulatory_class="ribosome_binding_site" gene 105951..106862 /locus_tag="lmo0098" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986620" CDS 105951..106862 /locus_tag="lmo0098" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannose transporter subunit IID" /protein_id="NP_463631.1" /db_xref="GeneID:986620" /translation="MAEKIELSKRDRLRVAWRSTFIQGSWNYERMQNGGWAFSMIPAI KKLYKTKEDRSQALKRHLEFFNTHPYIASPILGVTLALEEERANGAEVDDVAIQGVKV GMMGPLAGVGDPVFWFTIRPMLGALGASLALSGNILGPILFFVAWNVIRWGFMWYTQE FGYKAGSKITDDLSGGLLQDITKGASILGMFVLAALVQRWVNIQFAPIISKVKLDEGA YIDWSHLPQGAQGIKTALEQQQAGLALSEIKVTTLQNNLDNLIPGLAAVALTFLCMWL LKKKISPIIIILGLFVVGIVGHLIGLL" misc_feature 105951..106859 /locus_tag="lmo0098" /note="Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component [Carbohydrate transport and metabolism]; Region: ManZ; COG3716" /db_xref="CDD:442930" regulatory 106877..106912 /regulatory_class="terminator" regulatory 106974..106979 /regulatory_class="ribosome_binding_site" gene 106988..107377 /locus_tag="lmo0099" /db_xref="GeneID:986621" CDS 106988..107377 /locus_tag="lmo0099" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0099" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463632.1" /db_xref="GeneID:986621" /translation="MVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRK FVQIPWEEVDQVIVSVMLKGKWIPRYAIKTKRNGTYTFASKRPKEVLRKIRVYVDPAN MVSSLSFFDVMKRSFRSIFSKKKNKNK" misc_feature 106988..107362 /locus_tag="lmo0099" /note="Uncharacterized conserved protein [Function unknown]; Region: COG4687" /db_xref="CDD:443722" regulatory 107396..107434 /regulatory_class="terminator" regulatory 107484..107489 /regulatory_class="ribosome_binding_site" gene 107499..107849 /locus_tag="lmo0100" /db_xref="GeneID:986623" CDS 107499..107849 /locus_tag="lmo0100" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0100" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463633.1" /db_xref="GeneID:986623" /translation="MKKPRIYTMSFASVYPLYIQKAEKKDRTKEEVDEIIFWLTGYDQ DSLQQAIDQAIDFETFFAEAPKMNPNASLITGVICGYRVEEIEDKLMQQIRYLDKLVD ELAKGKKMEKILRK" misc_feature 107505..107846 /locus_tag="lmo0100" /note="Uncharacterized conserved protein [Function unknown]; Region: COG4898" /db_xref="CDD:443926" regulatory complement(107846..107880) /regulatory_class="terminator" regulatory 107857..107891 /regulatory_class="terminator" gene complement(107915..108208) /locus_tag="lmo0101" /db_xref="GeneID:986628" CDS complement(107915..108208) /locus_tag="lmo0101" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_463634.1" /db_xref="GeneID:986628" /translation="MKKLNELSKSDLLLIFQALSDPIRLDIFLCLLKSKEKRFSGTTY NISKSTMSHHIKLLKEAKLINLRKEGTTHIYSVNQELVSLISHFFEECGEKDE" misc_feature complement(107936..108208) /locus_tag="lmo0101" /note="DNA-binding transcriptional regulator, ArsR family [Transcription]; Region: ArsR; COG0640" /db_xref="CDD:440405" regulatory 108304..108309 /regulatory_class="ribosome_binding_site" gene 108320..108610 /locus_tag="lmo0102" /db_xref="GeneID:986630" CDS 108320..108610 /locus_tag="lmo0102" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0102" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463635.1" /db_xref="GeneID:986630" /translation="MLHIEAQITVKKEQTEAFLQAAKEVIAASRAEAGNHGYELVQST ENETVFYMLEKWADMDAIQQHNDSEHFKKFQKAAADFVAKELEISVLTPLAR" misc_feature 108323..108595 /locus_tag="lmo0102" /note="Quinol monooxygenase YgiN [Energy production and conversion]; Region: YgiN; COG1359" /db_xref="CDD:440970" regulatory 108610..108615 /regulatory_class="ribosome_binding_site" gene 108624..109256 /locus_tag="lmo0103" /db_xref="GeneID:986631" CDS 108624..109256 /locus_tag="lmo0103" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="NADH oxidase" /protein_id="NP_463636.1" /db_xref="GeneID:986631" /translation="MTYLNNDFEDLMKNRRSIREYDETVKISQEEMKAILEDAVTAPS SVNMQPWRFVVVESDAGKEKLSSLVRFNTRQNESSSAMILVFGDLQNFENGEKIYGES VERGLMPAEVKEQQMAKLSQYFASIPRSEAERVVLIDGGIVAMQLMLVARAHGYDTNP IGGFERTEVAEAFNMDPERYVPVMIVSIGKAKNSGYQSYRLPITDVTTFA" misc_feature 108648..109241 /locus_tag="lmo0103" /note="nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN; Region: MhqN-like; cd02137" /db_xref="CDD:380314" misc_feature order(108648..108650,108654..108659,108666..108668, 108720..108722,108729..108737,108741..108752, 108756..108758,108762..108764,108768..108770, 108774..108794,108801..108806,109044..109049, 109056..109061,109068..109073,109080..109082, 109107..109109,109140..109148,109164..109166, 109218..109241) /locus_tag="lmo0103" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:380314" misc_feature order(108666..108674,108750..108764,108846..108848, 109038..109040,109047..109049,109098..109112, 109173..109175,109215..109217,109221..109223) /locus_tag="lmo0103" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:380314" regulatory 109264..109299 /regulatory_class="terminator" regulatory 109333..109338 /regulatory_class="ribosome_binding_site" gene 109349..109720 /locus_tag="lmo0104" /db_xref="GeneID:986632" CDS 109349..109720 /locus_tag="lmo0104" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0104" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463637.1" /db_xref="GeneID:986632" /translation="MTIKITRKTGIGSGITPVKIRIENEEIVKLDNHQSHFFMPKMEK TKVCVTDWFYGSQEAVLENSNDVVVRINRKALLLNYSMFPFLFYGFVMTSLFATLIAL GLCLVSFFYSRKHWFEFVKIK" regulatory 109732..109767 /regulatory_class="terminator" regulatory 109996..110003 /regulatory_class="ribosome_binding_site" gene 110013..112283 /locus_tag="lmo0105" /db_xref="GeneID:986634" CDS 110013..112283 /locus_tag="lmo0105" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="chitinase B" /protein_id="NP_463638.1" /db_xref="GeneID:986634" /translation="MKKLFSITSVVLLVLSLVVVSIGAEPKRAKAAENVPQYRNVMYY GDWSIWGGEGNFYPKDIPADQLTHLNFAFLDFNSNGDLVFTDKDAAVGAPVGQEGVQW GGANAGVLNAIQDLRAQNPNLKIGVSVGGWSKSGDFSTVAADPTKRANFVKNVMKFVK YTNMDFVDLDWEYPASVRDADLVDNKNDEGTPNAKPADKQNFITLLQDLRTALDKQGV DINKKYELSVALPAAKSTLENGIDVANLFKVVDFANVMTYDLNGAWTPNSAHHTALYG NPKDPNYDSGFSVDQTVKYLKEKGAVSNKIVVGAAFYTRGWNKVAAGTDTALPGLFQA AEKTNKDADGSLTYGANNENPIKTGDGGRAGGVWAYRSIDALKAKTPTLKEYWDDTAK APYLYSKETGEFYTYDNTRSIGYKAQYVKDNNLGGMISWMQSQDKTTTSTKRDELTKA IKTGLFGTSAIPQNAITYANLNVVATVKPYSENGVGYEITITNNEKADETNEVLKSTE LSFETVKLPKFYIPVKAGETLTAGDYKAGTVTTSGGNTVVDLASVYDAQQIPQGASYT FRLKSSASSVDVANISKIDLTQRMVKSSVEFGKQTIFGGGTVVPDPSDTEAPTVPKAL ASSNVTDKSATLTWTASTDNKAVAGYKVYRNGTEVGSVSGTTFTDSGLTAKTAYTYTV KAYDAAGNFSAASSALTVTTLDAATPPATPAWDAAKTYNKGDRVSYKGKTYEAQWWTQ GNEPGAEQWGPWLLIN" misc_feature 110097..111377 /locus_tag="lmo0105" /note="Chitinase, GH18 family [Carbohydrate transport and metabolism]; Region: ChiA; COG3325" /db_xref="CDD:442554" misc_feature 111423..111827 /locus_tag="lmo0105" /note="an unknown function domain of Listeria innocua LinChi78 GH18 chitinase that is essential for its catalytic activity; found in similar chitinase-like proteins; Region: GH18_LinChi78-like_UFR; cd20174" /db_xref="CDD:380910" misc_feature order(111810..111812,111816..111818) /locus_tag="lmo0105" /note="active site residues [active]" /db_xref="CDD:380910" misc_feature 111858..>112175 /locus_tag="lmo0105" /note="Chitodextrinase [Carbohydrate transport and metabolism]; Region: COG3979" /db_xref="CDD:443178" misc_feature 112146..112268 /locus_tag="lmo0105" /note="Chitin-binding domain of chitinase C; Region: ChiC_BD; cd12215" /db_xref="CDD:213178" regulatory 112294..112330 /regulatory_class="terminator" regulatory 112371..112376 /regulatory_class="ribosome_binding_site" gene 112386..113288 /locus_tag="lmo0106" /db_xref="GeneID:986639" CDS 112386..113288 /locus_tag="lmo0106" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_463639.1" /db_xref="GeneID:986639" /translation="MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKSAEELVAQMV EKWRPYRTEVKGIAVSCPGVVDTEKGVIYQGGSLLFMHEKNLAEMLARECHVPVVLQN DAKSAALAELWLGVAKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSF DTKKLRGTFFGRTGSAVELIKRIASKKNLPNKKDGEHVFELINQGDEEANAIFDAYIY ELASQILNIQYLIDPEIIAIGGGISAQPVVVERLNDAVAEIKAANPYHAAQPKIVTCH FQNDANLYGALYNFFLQMDAQNKR" misc_feature 112386..113252 /locus_tag="lmo0106" /note="nucleotide-binding domain (NBD) of an uncharacterized subgroup of the ROK family; Region: ASKHA_NBD_ROK-like; cd24152" /db_xref="CDD:466988" regulatory complement(113273..113306) /regulatory_class="terminator" regulatory 113284..113317 /regulatory_class="terminator" gene complement(113313..115094) /locus_tag="lmo0107" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986644" CDS complement(113313..115094) /locus_tag="lmo0107" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_463640.1" /db_xref="GeneID:986644" /translation="MARNKFDIDEELETAFSAAHLKRILVYVKPYQKSIYITLFVILL ANVATMIGPYLTKIVIDDTIPNKNMTQLFWIAVIFIVSVIVTGLCMRYRIRSITLIGQ DILKDMRTAIFGHLQKLPFSYFDSRPHGKILIRVVNYINMLSDLLSNGLINLISDILS VIVTLGFMLMIDPVLTLYSLALIPVLFVIVMVIKTAQRKAYQVLSNKQSNMNAYIHES IAGIKVTQSFSREEENFEIFTEVSNEYRRSWMKAVKIQFLLWPGVQNIAVMTTCLIYF VGIKGYGVDVSTGTLIAFIGYVGNFWNPVINIGNFYNSLITATTYLERIFETMDVEPD IKDIPNAKKMPPIVGNVDFKDVYFRYEEGVDILKGINFHVDAGESIALVGPTGAGKTT IINLLSRFYNINSGEILVDGENVEEVTLRSLRSQMGVMLQDTFIFSGTIIENIRYGKL DATEEEIIAAAKVVRAHDFISGLKDGYYTEVKERGSTLSAGQRQLISFARALLADPKI LILDEATSSIDTQTEILLQEGLERLLEGRTSFIIAHRLSTIKNSSRIFYIDNGRIQEA GSHEELMAQHGYYYNLYQSQFDMLQAL" misc_feature complement(113334..115055) /locus_tag="lmo0107" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:440747" gene complement(115087..116829) /locus_tag="lmo0108" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986645" CDS complement(115087..116829) /locus_tag="lmo0108" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_463641.1" /db_xref="GeneID:986645" /translation="MESMKWIWQYVRKYRLLMIGVFILIFIASGISIIYPLLGGKVID DVVYQNKTNLLIPLLLIMIISTIIRTICRYTYQIMCERIGQNSLFRIREDLYKKLQSL DFDFFNNTRVGDIMARMTGDTDAIRHFVSWVSYNILENVFLFSFAIIIMATIDWKLTL ALVIVTPLIAVLTMKMSSKAQPVFYEIRESFSRLNSMVEENISGNRVVKAFAREDFEM KKFHEHNEDFKKRNLDSADVSRTYLPVLDSLAGMLVVITLIFGGYLVIKGQMTLGDLV AFNGFLWMLNGPMRMSGWLINDVQRFIASSFKIQDMMVTDAKIPIHAEKPAPSLQGHV EFKNVSFHFEDDPNTDVLKNISLKASPGQTIAILGETGAGKSTLVNLICRFYDPTSGE ILIDGVDARKWHVRELRNHIATVMQDIFLFSDTIEGNIAFGAPDATMEDVRRMARIAD ADHFIETMPESYDTIVGERGVGLSGGQKQRISLARALLKNPSILILDDTTSAVDMETE VKIQGELKKITENTTTFIIAHRISSVKEADEILILNHGEIIERGTHTSLLAEKGYYFD IYNKQLGTEANVNG" misc_feature complement(115105..116829) /locus_tag="lmo0108" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:440747" regulatory complement(115104..115109) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0108" regulatory complement(116837..116842) /regulatory_class="ribosome_binding_site" regulatory 116959..116964 /regulatory_class="ribosome_binding_site" gene 116972..117805 /locus_tag="lmo0109" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986650" CDS 116972..117805 /locus_tag="lmo0109" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="AraC family transcriptional regulator" /protein_id="NP_463642.1" /db_xref="GeneID:986650" /translation="MLKINTTTFNPQILYIANCYTNEVRVGENHHHDFLEISIICEGN VIYDIEGERVKLGKGDMLIFNPGVSHYDITEPGMTNAQLHIGFRNFALEGYTRNTFPF KKAFLRKKEEESAILSISKQIIEEKDAGKPGYDLILKAFVMQLIIHVLREATPEQLEN NGVKLSTDEQQKQILVNEIIHYMEKHHTEDVSLSTLSQTMYISPAYISKVFKEETGES PINYLIKIRLTRAEELLKNKDVSVKQAANMVGYNDAYYFSKLFKKYYGFPPSENWRKS S" misc_feature 116999..117409 /locus_tag="lmo0109" /note="AraC-like ligand binding domain; Region: AraC_binding; pfam02311" /db_xref="CDD:396749" misc_feature <117377..117799 /locus_tag="lmo0109" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" regulatory 117827..117832 /regulatory_class="ribosome_binding_site" gene 117841..118956 /locus_tag="lmo0110" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986652" CDS 117841..118956 /locus_tag="lmo0110" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="lipase" /protein_id="NP_463643.1" /db_xref="GeneID:986652" /translation="MDYEKALAFIKSNSTLEQEEGTEVIFKQAQETARGNLDPFLLKD LKQHLGGTNDAIKEAPQEIQMPDFSNLEIATAAALQMRATMGSPNIDLSNGVTTEYRV VEGDYGDIPVRIYRHEEATKPVPAFIFYHGGGFVGGTPAVVENFCKGIAEKLPAVVIN VDYHLAPEFPAPAAPKDCYRVLEWVVEQSNELGIDASKIGVSGDSAGGTLAAAVSYMD YEAETNYVGFQALLYPALTLVDEDNDKYQWDISKFGASEDTLPLVAPGIIGMNSSGEL LRKAYVRDENPAAPIYSPLSAVDKSIYPPTLIASAEFDALRAFADVFAKELRASGVQT KAIVYQGMCHAFIDKYGIFPQAEDVADEIVQMMKEIF" misc_feature 118219..118881 /locus_tag="lmo0110" /note="alpha/beta hydrolase fold; Region: Abhydrolase_3; pfam07859" /db_xref="CDD:400284" regulatory 118968..119000 /regulatory_class="terminator" regulatory 119053..119058 /regulatory_class="ribosome_binding_site" gene 119063..119770 /locus_tag="lmo0111" /db_xref="GeneID:986654" CDS 119063..119770 /locus_tag="lmo0111" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0111" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463644.1" /db_xref="GeneID:986654" /translation="MGLMKFQLFIQPKLDVLQGNIVEYEILLRDDSAVPRFPLSELEA VLADEELYLAFSEWFSEAFLDVLKKYPNDRFAINIAPQQLFYIETLHWLDKLKSESHR ITVEMTEDIFDVPGHKRHLNANDKNAFILNKIKVIHGLGYHIAIDDVSCGLNSLERVM SYLPYIIEIKFSLIHFKNIPLEDLLLFIKAWANFAQKNKLDFVVEGIETKETMTLLES HGVSIFQGYLVNKPFPV" misc_feature 119078..119767 /locus_tag="lmo0111" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:238923" gene complement(119740..120435) /locus_tag="lmo0112" /db_xref="GeneID:986655" CDS complement(119740..120435) /locus_tag="lmo0112" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Fnr/Crp family transcriptional regulator" /protein_id="NP_463645.1" /db_xref="GeneID:986655" /translation="MLHTIDFSDIFSSDYSSKISFKKGEIIHSYRDYEEKAPQIGAIL EGTAVLEGPTNEGRWMINALIGQHALFGMESLLETKTAPELTEYRVRALENGTVLFID REFLLNYLYANPQFFHLILDEVIVRYLFTSKNYKNINQAPIVKVTRILVEIIELLHLH QTEGSIELPVYVTQTFLADYCRSSRARVTEVLEELRESGLLLSKKPITISSHENLLDQ VDSFQTGNGLLTR" misc_feature complement(119791..120396) /locus_tag="lmo0112" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" regulatory complement(120443..120448) /regulatory_class="ribosome_binding_site" regulatory complement(120618..120651) /regulatory_class="terminator" gene complement(120654..121106) /locus_tag="lmo0113" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986656" CDS complement(120654..121106) /locus_tag="lmo0113" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463646.1" /db_xref="GeneID:986656" /translation="MYEKLVNKYQDEVTIREEKMPYKLPGLYLNGMIFISKDQSSIEK GCVLVEELMHYKYTVGNITKQETIMDKKQEIFARRKGYEELIPLDDIIACFYLGLREY FEVAEFLEVTEEFLRHTVSHYAEKYGPMYDYGGYFINFGNSIDVYKKF" misc_feature complement(120744..121070) /locus_tag="lmo0113" /note="IrrE N-terminal-like domain; Region: Peptidase_M78; pfam06114" /db_xref="CDD:399250" gene complement(121112..121447) /locus_tag="lmo0114" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986659" CDS complement(121112..121447) /locus_tag="lmo0114" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="repressor C1" /protein_id="NP_463647.1" /db_xref="GeneID:986659" /translation="MELNKFVGNKIKQYREERGLNQEALAEKLHTTRQTISRYENGDR KANQDVLFELAKIFNKRLDDFFPERNLPPVDERLVTIAAHIDDDVTEEEMRDILAYIE MKKKLHRGM" misc_feature complement(121244..121438) /locus_tag="lmo0114" /note="DNA-binding transcriptional regulator, XRE-family HTH domain [Transcription]; Region: XRE; COG1476" /db_xref="CDD:441085" regulatory complement(121115..121120) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0114" regulatory complement(121457..121462) /regulatory_class="ribosome_binding_site" regulatory 121649..121654 /regulatory_class="ribosome_binding_site" gene 121664..122092 /gene="lmaD" /locus_tag="lmo0115" /db_xref="GeneID:986665" CDS 121664..122092 /gene="lmaD" /locus_tag="lmo0115" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463648.1" /db_xref="GeneID:986665" /translation="MDRKLLKEKQIQLIFQLEQEENRFIRKRLIEELEFFEALGDREK GLLTAEQKLLILTPSEYREYKRTKSDVQISRIIGVSRSSLAEWKRKKGLNRKKSQPVQ QEMIDVLAFHLDKTKEEIGALPASAIECQYEAFVINEANN" regulatory 122092..122097 /regulatory_class="ribosome_binding_site" gene 122104..122520 /gene="lmaC" /locus_tag="lmo0116" /db_xref="GeneID:986666" CDS 122104..122520 /gene="lmaC" /locus_tag="lmo0116" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463649.1" /db_xref="GeneID:986666" /translation="MQVLVLPENKDINYIKTVQEVKRFFADFERFRMITGLSKKPHLL RNGFLEEPQFEPVAFSARHNKEVILEARWLVEKYTEMLNQMDDLYRTILMECYVERKQ DVAVMMDLPYEIAQFKRIKKRAVLELATLMGILVRK" misc_feature 122125..122508 /gene="lmaC" /locus_tag="lmo0116" /note="phage transcriptional regulator, ArpU family; Region: phage_arpU; TIGR01637" /db_xref="CDD:273725" regulatory 122783..122788 /regulatory_class="ribosome_binding_site" gene 122798..123187 /gene="lmaB" /locus_tag="lmo0117" /db_xref="GeneID:986670" CDS 122798..123187 /gene="lmaB" /locus_tag="lmo0117" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="antigen B" /protein_id="NP_463650.1" /db_xref="GeneID:986670" /translation="MKSLSFMRVLEAVRTMLQEKGGLDISIVMRDQVEMPTTMIEMID QEEEESQTAWKEKYRFAIHHYTNETDLAGVEKIDTLIQTGFTLPEGYKLIAVRHYGKQ NLVKENTLIHAKTSFEVSICRELKVKI" misc_feature 122849..123184 /gene="lmaB" /locus_tag="lmo0117" /note="Domain of unknown function (DUF5072); Region: DUF5072; pfam16807" /db_xref="CDD:407065" regulatory 123186..123191 /regulatory_class="ribosome_binding_site" gene 123200..123712 /gene="lmaA" /locus_tag="lmo0118" /db_xref="GeneID:986672" CDS 123200..123712 /gene="lmaA" /locus_tag="lmo0118" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="antigen A" /protein_id="NP_463651.1" /db_xref="GeneID:986672" /translation="MAFEENLYCDYTPGAAKAVAGKDVILAVFNAAGDKLLAVAGQQG LTVNRSKDSIEITSKDTVGGWKSKIGGMKEWSIENDGLYVADAESHKELAKYFESDSP VCVKIINQASKKGLFGGLAIVADYSFEAPFDEAMTYSVKLDGMGALVDLTITEGGDQM PGETPVAPAE" misc_feature 123245..123637 /gene="lmaA" /locus_tag="lmo0118" /note="phage major tail protein, TP901-1 family; Region: phgtail_TP901_1; TIGR02126" /db_xref="CDD:273986" regulatory 123747..123752 /regulatory_class="ribosome_binding_site" gene 123760..124062 /locus_tag="lmo0119" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986674" CDS 123760..124062 /locus_tag="lmo0119" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0119" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463652.1" /db_xref="GeneID:986674" /translation="MFEVNDTTYILRFNKQKVKTVELTSGISLVAALTANKGILSYQV IETLFVSGLVEEKGLVPVKQKEALEIFDKLVEEQGLISLNVAVIEKLQEDMGFLFR" regulatory 124093..124098 /regulatory_class="ribosome_binding_site" gene 124104..124508 /locus_tag="lmo0120" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986675" CDS 124104..124508 /locus_tag="lmo0120" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0120" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463653.1" /db_xref="GeneID:986675" /translation="MDSEMNHDFDLEKQFAFFVVNFRMSKHDFEELTEVEKNFIMKEW ENKVIFESTMLRNAVLNAEQNLNRKRNSRFIDLHKKRQKKADVNYTVNALQAISENEA KEGKAWIDRIYGANGLRRPKNKEERRNVNGGF" regulatory 124482..124487 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0120" gene 124495..126363 /locus_tag="lmo0121" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986683" CDS 124495..126363 /locus_tag="lmo0121" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phage tail protein" /protein_id="NP_463654.1" /db_xref="GeneID:986683" /translation="MADSKSFTFELNESVLTAQVGRLDEMAMVVEQRFSELKMTIEDV GNADPGSKISESLGGLQSGLGTISSAFGQLGSSSEAITSGFGTAVGSVGGITDAFKNL GSSVQNGTLFSSLATGIGGMSTMLGGVSGGVQGITNLASGFMELKNHLGGLMSSIGGV GGIMGKLTSPMGLVIIGIVALVAAFAYLMTTNESFRNTVMSVVTQVAQLFGQLVASLM PIIMQIVTAVMQIGAALMPMVMQFISFFAQLLAQLMPFINMLISMLMPVIMQIVQVVM SLVSALLPSIMTVIQGIMSVIQFLIPIIMQIATVVVQIVVTIISYISKIMPIVMTIIG VIVSIITTIISYVVIIATTIASVIGKIISFIASVITAVIGIVQPIIAFITNIFTTIVT IIGAAFQMVFTVASKIWNSIMSTISGIIDGIKAVITGISTTVSSVFNGVKRIITGVFD GIKSAWGGLTDFVGNIFDGVSSAIQTVVDNVKGFVNVVIRGINGAIGLINKIPGVEIG KIPQLISGTTNFQGGFARMNEGGRGEMVVLPSGSQVIPHDATMKYARESARGNKSMLY TSQGADLARVENLLERLLQKNPVIKMDDKVVAEVVSRNQANSFDQYNYTMGGAAYS" misc_feature <124657..125925 /locus_tag="lmo0121" /note="Phage-related protein [Mobilome: prophages, transposons]; Region: COG5412" /db_xref="CDD:444167" regulatory 126345..126350 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0121" gene 126360..127178 /locus_tag="lmo0122" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986687" CDS 126360..127178 /locus_tag="lmo0122" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463655.1" /db_xref="GeneID:986687" /translation="MSDLFLELNGKVHSLSETFPGLSVQEVSRQSPQLSMETAEIAGT DGVIPGMTQFKPFIFSAKCNLQALDIPDYHLAVREIYEFLFQRDSYYIWSDQMPGIRY EVHPKPVDFSRESDRVGLLTIEFDVFKGYAESRGTSLDPMTFEVDLWQMGMNLSNRDD LFYIFKENTFRVYNAGSDRVNPLMRHELDIAMTANGTPTIHNLTTGESFEYQKELRKT DVLLLNNIYPLVNNRRVGKDTNHGIITLEKGWNDFEIKGVTDVTIAFNFPFIYR" misc_feature 126444..127175 /locus_tag="lmo0122" /note="Phage tail protein; Region: Sipho_tail; pfam05709" /db_xref="CDD:428597" regulatory 127177..127182 /regulatory_class="ribosome_binding_site" gene 127188..128324 /locus_tag="lmo0123" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986689" CDS 127188..128324 /locus_tag="lmo0123" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463656.1" /db_xref="GeneID:986689" /translation="MDYVIIQSMDKEVEEILTDIDYGSFSYDYEKNTSRAISFTVNKT KQNAAIFDLVGNEAILTYQGQQFVIKKCTPKSIGGTLSKQITAQHICYTVQDHVQYNV KSGRKKYSIQTVLEFALQDNVLGFSYEIQGSFPLVELEDLGNKNGLELVNLCLEEFGA ILFADNKKLYFYDEKSWYVKTEKQFRYLYNTEEVSVDTNTDNLKTEIKCYGKQKENAD KLTGDNKYMAVVTYTSPNEAIYGKRMANAKSDDKITNNDDLLIFAKKQILDVPETALT ISYKGKEPVSERDVWYFIHEPMGFETEVKVTKIKSSHPWSKKFQEIGFSNSRRDMVRI QTQIANQVKKASVDTNKINSFSSIAMNAYDSRILTEVVGVVDGD" misc_feature 127197..127454 /locus_tag="lmo0123" /note="Prophage endopeptidase tail N-terminal domain; Region: Prophage_tailD1; pfam18994" /db_xref="CDD:436896" misc_feature 127458..128201 /locus_tag="lmo0123" /note="Prophage endopeptidase tail; Region: Prophage_tail; pfam06605" /db_xref="CDD:429028" regulatory 128300..128305 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0123" gene 128314..128613 /locus_tag="lmo0124" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986692" CDS 128314..128613 /locus_tag="lmo0124" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0124" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463657.1" /db_xref="GeneID:986692" /translation="MATEIRVLKNVDDTVFYPKTHVTAVEGLDSATTTTSGLMPASDK TKLNGIEANAEKNNVTAIDIANWNKKQDAILVSENGSNFKITVTNAGELKATKVE" regulatory 128616..128621 /regulatory_class="ribosome_binding_site" gene 128628..129203 /locus_tag="lmo0125" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986693" CDS 128628..129203 /locus_tag="lmo0125" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0125" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463658.1" /db_xref="GeneID:986693" /translation="MKLDLWKWEMLLQGREFRNKTNDNWQKLMDWSDFISTGLSAIYV YVNKADATLNNKIDTVDKAVNARVNELISGTEQLSEVVDARSDAFGARYPVLRERLNQ EQLNFSKKSTIQFDASTIISMEKQDIGLLTSKKISEAQTVCFLNISSLDEEADIVLEK TGETSFSDNLTSLVFAKIGTNERYQMEPVGA" regulatory 129204..129209 /regulatory_class="ribosome_binding_site" gene 129218..129697 /locus_tag="lmo0126" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986697" CDS 129218..129697 /locus_tag="lmo0126" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0126" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463659.1" /db_xref="GeneID:986697" /translation="MTEIKRMLQTKEDNSKEQFYPETHVAGIVGLTEYVSGQLPTGVV SVNGKAGRVLLDAEDVHAAKKSHTHEVATYTTDGFMSSFDKQKIDQLVSPEAGVTSIN GKTGIVDLFASDLDAAEINHTHAEATTTESGFLSIDDKEKLDAIQVIALETIKEVIE" regulatory 129681..129686 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0126" gene 129694..130230 /locus_tag="lmo0127" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986705" CDS 129694..130230 /locus_tag="lmo0127" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463660.1" /db_xref="GeneID:986705" /translation="MTKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKTIWDQ KESTAGAEQKANTALNSAKDYVDTIGEGTVIFKGANLMGAGQSFKWDASKLKFGMTLL FSRYDAANNTPQDYYYHSVFLSKAQLVELAGKGILVQMPSTTYGDRKYLYVSTTGLSG HFDNSNYAAWALRQVTIM" regulatory 130237..130242 /regulatory_class="ribosome_binding_site" gene 130249..130671 /locus_tag="lmo0128" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986706" CDS 130249..130671 /locus_tag="lmo0128" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463661.1" /db_xref="GeneID:986706" /translation="MEVILKFGILGFGAIFGYLFGEVDLLVKVLVCFIVADYISGLLA SGYLGELSSKMGFKGIAKKIAILILVAIAHQIDLILGTHNTTRDAVIFFYLANELISI LENFVRMGMKVPEVLKNLILIFDAKSGEDEEKHDKDMD" misc_feature 130252..130650 /locus_tag="lmo0128" /note="Phage-related holin (Lysis protein) [Mobilome: prophages, transposons]; Region: COG4824" /db_xref="CDD:443852" regulatory 130637..130642 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0128" gene 130652..131380 /locus_tag="lmo0129" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986713" CDS 130652..131380 /locus_tag="lmo0129" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase" /protein_id="NP_463662.1" /db_xref="GeneID:986713" /translation="MTKIWIDAGHGGKDSGASGNGLVEKNWVLTVAKQLQTELVKAGF EVGMTRTNDTFYELSDRAKKANSFKADLFISLHFNAGGGKGYEDYIYTSVPAATVEIQ KIIHKNIITKVTKHGMNDRGMKKANFAVLRETAMDAILLEAGFCDSTDALILEKKAYQ TDYCLGIVSAVQEIFGAMVTKYRAGKYLTSDDAISGTNIKGYLEAGTKVFVYKETEKT LNLTTTKGVPGSWVLKTEVNTGKR" misc_feature 130658..131167 /locus_tag="lmo0129" /note="N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino...; Region: MurNAc-LAA; cd02696" /db_xref="CDD:119407" misc_feature order(130679..130681,130721..130723,130880..130882, 131075..131077) /locus_tag="lmo0129" /note="active site" /db_xref="CDD:119407" misc_feature order(130679..130681,130721..130723,130880..130882) /locus_tag="lmo0129" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:119407" regulatory complement(131375..131408) /regulatory_class="terminator" regulatory 131386..131419 /regulatory_class="terminator" gene complement(131419..133773) /locus_tag="lmo0130" /db_xref="GeneID:986721" CDS complement(131419..133773) /locus_tag="lmo0130" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="5'-nucleotidase" /protein_id="NP_463663.1" /db_xref="GeneID:986721" /translation="MKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQIL GINDFHGALETASKDASGSPIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDM VGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFDEGLPEYKRILDGVSTNKFGPIV EAYPRVKSDMKIVAANVVNKGTNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPNLVLA NHIKDYDFLDEAETIVKYSAELRGQGVNAIVVLSHVPALSTGNPNTGTKQDVAGEAAN MMTKANELDPNNSVDLVLAGHNHQYTNGLVGKTRIVQSYNNGKAFSDVTGELDKTTGD FVSPPDAKITYNTRSVTPNADITAVTEDAKSRIEGVINETIGLANKDVISRDTNPDNK AIDDKESELGNMITDAQRYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAA QAVQPFGNILQVVEMTGADILEALNQQYLSNQTYFLQISGLKYTFTDTDDLDHAYKVA SVTTEDGTPLKTDQKYKVVINDFLFGGGDGFSAFKKANLVTAIDPDTETFINYIKDQK AAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGA TVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTF QATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTT TSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS" misc_feature complement(132082..133665) /locus_tag="lmo0130" /note="2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family [Nucleotide transport and metabolism, Defense mechanisms]; Region: UshA; COG0737" /db_xref="CDD:440500" misc_feature complement(131719..131970) /locus_tag="lmo0130" /note="Bacterial Ig domain; Region: Big_6; pfam17936" /db_xref="CDD:465576" regulatory 133949..133954 /regulatory_class="ribosome_binding_site" gene 133961..134710 /locus_tag="lmo0131" /db_xref="GeneID:986722" CDS 133961..134710 /locus_tag="lmo0131" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463664.1" /db_xref="GeneID:986722" /translation="MDISSTEIWDAIRRNSYLLYYQPKVDAKTNKIIGFEGLVRLKTA TTILAPIDFFDDIVLLNATREMQDFVAETAIKQINQLGGRFSISINIPAHYVASSTYM TFLHDYVKEHLKYPECLEIEIIERGEITELAIADKNLRKIKDLGVKVSMDDFGKGYSS LAYLRSLPIDIVKTDMSFIALLKTDRKQQIIIRAIVNLCHDLGGKVVTEGVEDMEQVE KLREMKVDYFQGYYFSRPLPMEEIKQKYSIV" misc_feature 133976..134683 /locus_tag="lmo0131" /note="EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second...; Region: EAL; cd01948" /db_xref="CDD:238923" regulatory complement(134719..134773) /regulatory_class="terminator" regulatory 134731..134785 /regulatory_class="terminator" gene complement(134782..136290) /locus_tag="lmo0132" /db_xref="GeneID:986732" CDS complement(134782..136290) /locus_tag="lmo0132" /EC_number="1.1.1.205" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate" /codon_start=1 /transl_table=11 /product="inosine 5-monophosphate dehydrogenase" /protein_id="NP_463665.1" /db_xref="GeneID:986732" /translation="MAFYFEEPSRTFSEFLLVPGYSSAECVPTNVSLKTPIVKFKKGE ESAITMNIPLVSAIMQAVSDDNMGIALATEGGVSFIFGSQSIESEAAMVSRVKNHKAG FVISDSNISPDKTLQDILDLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYRVTRMSPD EKVADFMTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKDYDSN KENKLELLDSSKRYVVGAGINTRDYEERVPALVEAGADILCIDSSEGYSEWQKRTLDY VRGKYGDTVKVGAGNVVDRDGFRYLAEAGADFVKVGVGGGSICITREQKGIGRGQATA LIDVAKARDEYFEETGVYIPICSDGGIVYDYHMTLALAMGADFIMLGRYFSRFDESPT NKVNLNGTYMKEYWGEGANRARNWQRYDLGGDKKLSFEEGVDSYVPYAGSLKDNVAIS LSKVRSTMCNCGALNIPELQQKAKITLVSSTSIVEGGAHDVVVKDASNNLIK" misc_feature complement(134794..136290) /locus_tag="lmo0132" /note="IMP dehydrogenase; Region: PRK07107" /db_xref="CDD:180842" regulatory complement(136301..136306) /regulatory_class="ribosome_binding_site" regulatory 136456..136461 /regulatory_class="ribosome_binding_site" gene 136469..136702 /locus_tag="lmo0133" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986735" CDS 136469..136702 /locus_tag="lmo0133" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463666.1" /db_xref="GeneID:986735" /translation="MDEETLLERGYRKYRGADVDIYFNTNVCEHSGNCVKGNVELFNL DRKPWIMPDNVSKEEAKRVIHTCPSGALQYIEK" misc_feature 136508..136699 /locus_tag="lmo0133" /note="Divergent 4Fe-4S mono-cluster; Region: Fer4_19; pfam06902" /db_xref="CDD:399707" regulatory 136701..136706 /regulatory_class="ribosome_binding_site" gene 136714..136992 /locus_tag="lmo0134" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986737" CDS 136714..136992 /locus_tag="lmo0134" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463667.1" /db_xref="GeneID:986737" /translation="MEYKNGENRIYAVNDEGVEVGEVTFVPTGEDMFIIDHTGVDDAA RGQGIAQELVKRAVEKAKSEGKKIVPLCPFAKAEFSKKPEYQEVEASK" misc_feature 136723..136977 /locus_tag="lmo0134" /note="Predicted acetyltransferase, GNAT superfamily [General function prediction only]; Region: YidJ; COG2388" /db_xref="CDD:441953" regulatory 137000..137034 /regulatory_class="terminator" gene 137133..137235 /locus_tag="lmos03" /db_xref="GeneID:18245122" misc_RNA 137133..137235 /locus_tag="lmos03" /product="SAM" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245122" regulatory 137306..137311 /regulatory_class="ribosome_binding_site" gene 137323..138897 /locus_tag="lmo0135" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986748" CDS 137323..138897 /locus_tag="lmo0135" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptide ABC transporter substrate-binding protein" /protein_id="NP_463668.1" /db_xref="GeneID:986748" /translation="MKKFLLVAVISVFALVLTACGGSGASSDKANGSGKAKDGGSLII GVTGDPEVINPNYASDRVTLTIQQAVYAPLFWEVDGKPALAKSLDISDDNLTYTVKLK DGLTWHDGKPLTADDVVFTVNSILDTKQNSPNRGNFVFDDKPVKVEAVDDTTVKFTLP TVAPAFENTIKTFFPIPKHIFEGVENIEKSDKNKNPIGSGPYKFVEYKTGEYVSLERF NDYFDGKPKLDKVTFRITKDQNAANLALQNGEINLKSIQPSDRNKVEKASAVNIITYP ENRLSYATFNENQPALKSKELRQALSYALDREEIIDAAYGSDEYAKPASSFLTENTKY FTDKVETYDQDIAKAKKLVKESGFDTSQKLTVYYLNNSKSQESIALYLQQQYKEIGVT LDLKPTDPNALSNITLDRKNADYSIALNGYIMGNDPDAYKSLYLSDAPYNYSNYHNKD LDALWEKGAVTADDKERQEIYEKIQNTIADDAVIYPISYDNAVLALDSRYGGQKAATP QPVTMFRDLSKLYLTE" misc_feature 137323..>137520 /locus_tag="lmo0135" /note="ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]; Region: NlpA; COG1464" /db_xref="CDD:441073" misc_feature 137479..138879 /locus_tag="lmo0135" /note="ABC-type transport system, periplasmic component [Amino acid transport and metabolism]; Region: DdpA; COG0747" /db_xref="CDD:440510" regulatory 138922..138967 /regulatory_class="terminator" regulatory 138987..138992 /regulatory_class="ribosome_binding_site" gene 138999..139949 /locus_tag="lmo0136" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986752" CDS 138999..139949 /locus_tag="lmo0136" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptide ABC transporter permease" /protein_id="NP_463669.1" /db_xref="GeneID:986752" /translation="MLKTIIKRVLQIIPMLFIISIISFALIKLAPGDPVNSFVTPDMN PDDVERIRQSLGLDQPIYVQYFIWLGNLLQGNLGYSIVNSQPVLQQILERIPATLGLV GTSLVLTLLLSIPLGLVAANYENTWIDKVLNGISYIGISIPIFWFGMILIDVFSIQLG WLPSLGMRTIGVDSFWDMAEHAILPVITLTFQGCAAYYRYVRSNTINQLKEEYVLFGY AKGLSKVQIMGHHVLKNSLLPVITLLGMSLPQVITGAFITESIFSWPGMGSLGINAIF QLDYPVIMAITLFSALLLIIGNLLADLAYMIVDPRIREMG" misc_feature 138999..139937 /locus_tag="lmo0136" /note="ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism]; Region: DppB; COG0601" /db_xref="CDD:440366" regulatory 139946..139951 /regulatory_class="ribosome_binding_site" gene 139960..140853 /locus_tag="lmo0137" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986757" CDS 139960..140853 /locus_tag="lmo0137" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptide ABC transporter permease" /protein_id="NP_463670.1" /db_xref="GeneID:986757" /translation="MRLDFSKKTMQDFERDAEVVHATRERSFWRFMLADRRAVFATSV LILITVACIFAFLSPYDPNALSVQDKLMPPNSSHWFGTDDHGRDYLTRVLYGGRVSLL VGVFAMMIAVVVGTLAGTVSGYFGGFIDNIVMRFLDIFMSIPSFFLLMILNAYLKPGI SNIIIIIGLLSWMEVARIVRAETLTLKEREFILYSKSSGGGFFHIMFKHIIPNAMPSI VVAASLNVATAILTESALSFLGLGVQQPNASWGSMLNNAQGYVGEATYLALFPGLLIL MTILSFNVLGDVLRKGLSRRY" misc_feature 140023..140829 /locus_tag="lmo0137" /note="ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism]; Region: DppC; COG1173" /db_xref="CDD:440786" regulatory 140863..140896 /regulatory_class="terminator" regulatory 141039..141044 /regulatory_class="ribosome_binding_site" gene 141052..141336 /locus_tag="lmo0138" /db_xref="GeneID:986772" CDS 141052..141336 /locus_tag="lmo0138" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0138" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463671.1" /db_xref="GeneID:986772" /translation="MSEIKVKEATLAKYATKLESKGKSTEYLPMKGGNMSYSQANSIN HFRTALFDLVDAVDNFQGVVGTDAKRLKELGASFTRKDQELERSMGLGGK" misc_feature 141052..141321 /locus_tag="lmo0138" /note="Protein of unknown function (DUF3130; Region: DUF3130; pfam11328" /db_xref="CDD:288220" regulatory 141324..141329 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0138" gene 141337..141705 /locus_tag="lmo0139" /db_xref="GeneID:986775" CDS 141337..141705 /locus_tag="lmo0139" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0139" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463672.1" /db_xref="GeneID:986775" /translation="MDAKSQQAEAQLQLLKKEQSAAKDFLQDLQRQQNEQEWLAEDVA RVHQEERESLELLREVWQGAESRSFGYYLADLQEEEKQKWHKKIQANEEECQQKITAC RKNIYQLENQQQDLQKELLQ" regulatory 141607..141613 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0139" gene 141618..143006 /locus_tag="lmo0140" /db_xref="GeneID:986783" CDS 141618..143006 /locus_tag="lmo0140" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0140" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463673.1" /db_xref="GeneID:986783" /translation="MPTKNHRLPKKHLPIRKSTTRFTKGVVTVSRIDIGEIQTFAYQL HTANEAARKSIKDIKNAVKNYTEDGSLKGKAIDASKNYYQMTYFPLCDAIIEAMNESE ERLAQYIADFHAQVDSSADARIDADGLYELGKMIDRIEAKKEALAQRMNTGTEGQMQS YRSQLSIAYKQENILEKYLAFEQSHGGFFDNLTDLVRGIQQTIRELQSNIQFNSKTGT YDMSKLNFTTVTRMQNASGKALNDNAKTFNFDEYQKTYRGQMWVLMKNGIVDVEATNA YNAAVLGGEMPHESNEAQEEAELLQAVVQSVKEGTDPVTGQEISKAQGFGIISGLIFR YTAGGYKGKKFKIPRDWLHRRKKNNGVEVGTDFGKIGKLVNHPNIKINWSEYAEHGMS RLKQRGLSKSQVDDFVEHGKVLSQNEGEKFAFITEDGVAIVSKDGKLVTAWGKKDFDE GMKKIIGKLYGK" misc_feature 141705..142274 /locus_tag="lmo0140" /note="LXG domain of WXG superfamily; Region: LXG; pfam04740" /db_xref="CDD:428100" regulatory 143002..143007 /regulatory_class="ribosome_binding_site" gene 143016..143258 /locus_tag="lmo0141" /db_xref="GeneID:986784" CDS 143016..143258 /locus_tag="lmo0141" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0141" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463674.1" /db_xref="GeneID:986784" /translation="MYEKVEKIINDWDPIELFPLAPKDEYSQEINKIISIVQENPNID MNVLGKGIRKIFIDSFGENLIFKNNEDEIAEKILAL" regulatory 143350..143355 /regulatory_class="ribosome_binding_site" gene 143366..143722 /locus_tag="lmo0142" /db_xref="GeneID:986788" CDS 143366..143722 /locus_tag="lmo0142" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0142" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463675.1" /db_xref="GeneID:986788" /translation="MINSRFYEGFEGEAELSFVAGDNKLLIWNGYFETILDNLLDCNV EREGVLKEYFNHEGWYDDSPWMIEDNSLTIIQLKCFDINKINQTSMKDDLEEVVKTII SFLENNRFSKIYIEYE" gene 143986..144273 /locus_tag="lmo0142a" /db_xref="GeneID:16695797" CDS 143986..144273 /locus_tag="lmo0142a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475626.1" /db_xref="GeneID:16695797" /translation="MNIVLSERKKLHMNDDYGIEKCLSKMTALLSRDEDTTMKYLENC DADNLYWISEIFEDISANLKSQKFIDYLRKLDKKFPELEMTQDIDIAESYF" regulatory 144083..144088 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0142a" gene 144097..144273 /locus_tag="lmo0143" /db_xref="GeneID:986794" CDS 144097..144273 /locus_tag="lmo0143" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0143" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463676.1" /db_xref="GeneID:986794" /translation="MKYLENCDADNLYWISEIFEDISANLKSQKFIDYLRKLDKKFPE LEMTQDIDIAESYF" misc_feature <144181..>144267 /locus_tag="lmo0143" /note="sodium/calcium exchanger 1; Region: caca; TIGR00845" /db_xref="CDD:273296" regulatory 144382..144386 /regulatory_class="ribosome_binding_site" gene 144397..144840 /locus_tag="lmo0144" /db_xref="GeneID:986795" CDS 144397..144840 /locus_tag="lmo0144" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0144" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463677.1" /db_xref="GeneID:986795" /translation="MEEQEIIEKVEILPNNFSENDSIYISQENIKNLVLFSKENQTVL ELLITPFLICVNSGLKYELHYYEISTEISKNDTEIIGFPFGNKLPKEITDNISPKLFV RREDYSAFENFLSQYFNAMKSMGFADDKQAIGMIEHGATLFYEVL" regulatory 144875..144919 /regulatory_class="terminator" regulatory 145338..145343 /regulatory_class="ribosome_binding_site" gene 145354..145560 /locus_tag="lmo0146" /db_xref="GeneID:986800" CDS 145354..145560 /locus_tag="lmo0146" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463679.1" /db_xref="GeneID:986800" /translation="MKFDLENGYVVKADGEMLVGGKFVVFKDSMKNWEPPYENKKLSE SEVQEIIQQVKQSTNENTVQISFE" misc_feature 145369..145515 /locus_tag="lmo0146" /note="Immunity protein 74; Region: Imm74; pfam15603" /db_xref="CDD:406121" regulatory 145857..145862 /regulatory_class="ribosome_binding_site" gene 145869..146306 /locus_tag="lmo0147" /db_xref="GeneID:986802" CDS 145869..146306 /locus_tag="lmo0147" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0147" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463680.1" /db_xref="GeneID:986802" /translation="MKIKKILPQTIKSEVYFIDEIKNFDIVTEKMNDNFYTYRLGSNV MMWLNDEGVIGEIECIFPAQIDNLITLWEEKNTVVQNGFPMIDTDIVENKTFIPKVRI FNHGDYFILYFSNMYKYNKEIISENLTFYAKDTELIAIKAELT" gene 146306..146656 /locus_tag="lmo0148" /db_xref="GeneID:986805" CDS 146306..146656 /locus_tag="lmo0148" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0148" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463681.1" /db_xref="GeneID:986805" /translation="MLKNYYTGFEGYPEIDFYTYINGEKTGIEMWEGYFDNIMNEFSP VDGRWVSLAYYYHLYEGWYDESPWVIPDNKKALEQFGTIDIKVLDNVTQEIMMKLIKL LKDNLDSEIFIEYS" regulatory 146666..146705 /regulatory_class="terminator" gene 146764..147381 /locus_tag="lmo0149" /db_xref="GeneID:986806" CDS 146764..147381 /locus_tag="lmo0149" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0149" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463682.1" /db_xref="GeneID:986806" /translation="MWVLMKNGIVDVEATNAYNAAVLGGKMPHESNEAQEEAELLQAV VQSVKEGTDPVTGQEISKAQGFSIISGVIFYYAGGGYKGKKIKIPKKWLDRRRNVNRI DFLQSVNIKDFVVKDKHLRNSTAKRARKFDAETSEEANLIVQDALKNGKVKKIEDNGL GSQRQKSYSAIIDTEKNVGTKGESHIKIVYDELNNVWTVYPVPAP" regulatory 147382..147387 /regulatory_class="ribosome_binding_site" gene 147399..147764 /locus_tag="lmo0150" /db_xref="GeneID:986809" CDS 147399..147764 /locus_tag="lmo0150" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0150" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463683.1" /db_xref="GeneID:986809" /translation="MNNIDSIMSKYNKQQVSKIKDFLLSEIDSDNIEETIDFVKSNNQ EKMGKFQDILYDGGIYSGLFIEGNQYLISSSNRKVLIIDAVSEENGVDKELTRIECSL EDFTFLLRNIKDVLRYEEF" regulatory 147869..147874 /regulatory_class="ribosome_binding_site" gene 147884..148291 /locus_tag="lmo0151" /db_xref="GeneID:986811" CDS 147884..148291 /locus_tag="lmo0151" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0151" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463684.1" /db_xref="GeneID:986811" /translation="MDQKIKDIYHIDDSFSIDNEKYNKWLKSLLNKTRGEITENDVYT MLLQQELEDLAIEKAIEFIKIDPLAGEMWDGQFLEQLAGISVDKLVAYKEELQKLIPY MDNQINEILWDFETEKEEFLFRYAKFKDKVANL" misc_feature 147902..148180 /locus_tag="lmo0151" /note="CDI immunity proteins; Region: CdiI_3; pfam18616" /db_xref="CDD:465823" misc_feature order(147914..147919,147947..147952,147959..147961, 148013..148015,148022..148027,148094..148096, 148100..148102,148109..148111,148118..148120, 148130..148132,148232..148234,148241..148243) /locus_tag="lmo0151" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:412046" regulatory complement(148294..148328) /regulatory_class="terminator" regulatory 148305..148339 /regulatory_class="terminator" gene complement(148354..150009) /locus_tag="lmo0152" /db_xref="GeneID:986821" CDS complement(148354..150009) /locus_tag="lmo0152" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptide ABC transporter substrate-binding protein" /protein_id="NP_463685.1" /db_xref="GeneID:986821" /translation="MHFLKKTLPIFAILTVLLLTACGNDNEKSTTKTSPDKIKFLETS ELLTLNTTAEEDFASFTAQNQVFEGLYTLDQKDNFVPGVADGMPEISTDQTKYTIKLK KNAKWSDGSQVTADDFVYAWRRAVDPKTAPGYSALFKDSIKNATEINEGKLPVTDLGV VATDPTTLEITLKKPVPYFISLLSFETFFPQKESYVKKQGDKYGTDSAHTLYNGPFVM KDWGGNITNKWTYAKNDQYWDKDNVKVNEIDVQVAKDINAGVNLYNTNEADRVPLSGD FAKQYKDKKDFQTEKDALISYLRMNQKRDGKATPLANNSLRHALNLAVDKKQLTDRIL GDGSFPANGLLPKDFVQNPTTGADFRTDSGNHLVYNKEEALKYWKQAQKELGTDKVTI ELLGDDQETTKTIFAYLKAQFEDNLPGVTIKVKNMPSKSATQLTSDGNYDLSLAAWMP DFKDPWTYSSLFLSDYFNNHMSYNSPAYDKLVKSTDTTLATKPEERWNAFVASEKVLL DDDAAILPLYQHQTAVLQRTDITGVQKHAFGSPYSYKFIRVEK" misc_feature complement(148369..149904) /locus_tag="lmo0152" /note="The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold; Region: PBP2_OppA; cd08504" /db_xref="CDD:173869" misc_feature complement(order(148450..148452,148657..148671, 148675..148677,148723..148725,149134..149136, 149194..149196,149830..149832)) /locus_tag="lmo0152" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:173869" regulatory complement(150018..150023) /regulatory_class="ribosome_binding_site" regulatory 150220..150225 /regulatory_class="ribosome_binding_site" gene 150232..151173 /locus_tag="lmo0153" /db_xref="GeneID:986823" CDS 150232..151173 /locus_tag="lmo0153" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="zinc ABC transporter substrate-binding protein" /protein_id="NP_463686.1" /db_xref="GeneID:986823" /translation="MKKWSFLVVTVLAFVLVLAGCGASNDKVSGDKDKLKVVTTFYPM YDFTKNVAGDNASIEMLIDAGTEPHDYEPSAKDIAKIEAADVFVYNSEDMETWVPSVL KSLDSKKLTVIDASKGIELVEGTEEEDHDHEHEEGHHHEHDPHVWLSPVLAEQEVTNI QNGLTKADKTNADTYKKNAETYKEKLKTLDNKFKTAFEGAKQRDFVTQHAAFQYLAKE YDLHQVAIAGLSPDQEPSPARLAELQKYVKENNISTIYFEEVASPKVAETLANETGAK LEVLSPIEGITDKEQKKGMDYIAYMEQNLQALQKTIK" misc_feature 150232..>150327 /locus_tag="lmo0153" /note="ABC-type oligopeptide transport system, periplasmic component [Amino acid transport and metabolism]; Region: OppA; COG4166" /db_xref="CDD:443327" misc_feature 150325..151170 /locus_tag="lmo0153" /note="Metal binding protein AdcA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AdcA proteins belong to the TroA superfamily of helical backbone metal receptor...; Region: AdcA; cd01017" /db_xref="CDD:238499" misc_feature order(150436..150438,150664..150666,150856..150858, 151081..151083) /locus_tag="lmo0153" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238499" regulatory 151173..151178 /regulatory_class="ribosome_binding_site" gene 151186..151890 /locus_tag="lmo0154" /db_xref="GeneID:986826" CDS 151186..151890 /locus_tag="lmo0154" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="zinc ABC transporter ATP-binding protein" /protein_id="NP_463687.1" /db_xref="GeneID:986826" /translation="MKYIDIANIGFKYESEPVLENISFQVSAGEFIILTGENGAAKST LLRIILGILQPDKGSVTFAKKNADGGRLLTGYVPQQIASFNAGFPSTVLELVRSGRFP NGKWFKRLTTKDHAHVEKALKSVEMWDYRHKRIGELSGGQKQRICLARMFATDPDILI LDEPQTAMDKQSKIRFYNLLKHEAQVHGKAILMVTHDSEEMEDFVDKHIRLIRKEDVS WKCFSMDLCKEPSKRP" misc_feature 151186..151827 /locus_tag="lmo0154" /note="ABC-type Mn2+/Zn2+ transport system, ATPase component [Inorganic ion transport and metabolism]; Region: ZnuC; COG1121" /db_xref="CDD:440738" regulatory 151826..151831 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0154" gene 151839..152645 /locus_tag="lmo0155" /db_xref="GeneID:986832" CDS 151839..152645 /locus_tag="lmo0155" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="zinc ABC transporter permease" /protein_id="NP_463688.1" /db_xref="GeneID:986832" /translation="MEMFLYGFMQRAFQASMIIAIIAPLLGVFLIIRRQSLMADTLSH VSLAGVAFGLVLNVNPSVTTLIVVVIAALGIEYLRGVYVTYSELSIAILMAGGLAVAL VLMSLDQGGITTSVQQYLFGSIVTISKAQVQLLVILGVAIVVLFLVFKRFMFVLTFSE DVAVAEGVPVRLISLLFSVVTGIAIAVIMPIAGALLVSALIILPAAIGMRISKGFLMC VISAILIGLVGMFSGLVSSYQLGTPPGATITLMFIILFIISTVVLKLIRK" misc_feature 151854..152624 /locus_tag="lmo0155" /note="ABC-type Mn2+/Zn2+ transport system, permease component [Inorganic ion transport and metabolism]; Region: ZnuB; COG1108" /db_xref="CDD:440725" gene complement(152648..153328) /locus_tag="lmo0156" /db_xref="GeneID:986833" CDS complement(152648..153328) /locus_tag="lmo0156" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0156" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463689.1" /db_xref="GeneID:986833" /translation="MPKNLYNYQEFIRLSHEGKIAYEQIDVPKNASLLTEKIDIDNHI YLVVDGYIALILNDGSQNSKIYSIQGKGTFLNYFTLLDQSNNHFNFKTLSGCSLYKYS KADMEYFLSMFPENFGFQFFIMKNQTTHVYFKSLMASSPASEKLKTTFSNMALLHGVL SDDGTVILPQAIKTSHLLSYSNLSKSCFYKDLQYLKTTNQIEKKEKCWIIHDQALYTM IQNGQTSF" misc_feature complement(152693..153262) /locus_tag="lmo0156" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" regulatory complement(153337..153342) /regulatory_class="ribosome_binding_site" regulatory 153595..153600 /regulatory_class="ribosome_binding_site" gene 153608..155947 /locus_tag="lmo0157" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986835" CDS 153608..155947 /locus_tag="lmo0157" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP-dependent helicase" /protein_id="NP_463690.1" /db_xref="GeneID:986835" /translation="MRKVRISVRRLVEFVRRSGSIDNRMTSSDRALEGTKIHQLLQKE AGEEYAAEVRLNLDRIVDGIAFSLDGRADGIINGRMIDEIKTTETPMDEITENFRPLH WAQLICYGFMLAEKSDLAEVTLQLTYYQVVDKEVKQFQRVMSREELSVFVDDLLSQYA IWAKASAAWEMKRNKTIQELTFPYDSYRSGQRELAIAVYRTISSEESLFCEAPTGIGK TMSTLFPGIKAMGEGKTDKLFYFTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKI CFLDERKCEPDHCQFARGYYDRLNEALFDMLQSEEAITRQVVESYARKYTLCPFELSL DVALFCDVIVCDYNYLFDPVVYLKRFFAEGPGKYTFLVDEVHNLVDRARSMYSATLKK SAVMQVKRGLDAKNNKRLLNAINVMNKDMIALNKKLKDLDGTIYVQKNELIDWNESVL KFTFVAKEWLPQNTQSEIQADVLELYFESLRYVAIADFYDDRYVTQVTKSHGDLEIKQ VCLDPSFLLSERLKLGSSSVLFSATLRPIDYYTNLLGGQEDTSRMIFSSPFKQKNMHL LVADYISTKYQMRENSMEAVVDALYALVSGENGNYLFFFPSFLYLQKVYDLFKEKYPN IRLQKQETAMDEERREHFLERFQAENVETLIGFCVLGGVFSEGVDLRGNRLVGAAVVG VGLAQLNHESDLIKDYYNETIGRGFDYAYQIPGMNKVLQAVGRVIRGESDRGVVLLIE ERFSADRYRALFPTHWNHAKTVKSTDDISREVAGFWRNS" misc_feature 154142..155941 /locus_tag="lmo0157" /note="Rad3-related DNA helicase DinG [Replication, recombination and repair]; Region: DinG; COG1199" /db_xref="CDD:440812" regulatory 155982..155987 /regulatory_class="ribosome_binding_site" gene 155993..156805 /locus_tag="lmo0158" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986836" CDS 155993..156805 /locus_tag="lmo0158" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463691.1" /db_xref="GeneID:986836" /translation="MYKIIAIDIDGTLLNDTHEITPAVRDSIKAAKAKGVKVVLCTGR PLAGIKKSLIELDLLDEGDYAITFNGAVVLETASEKTLADITLNKTELEEIYAFCHAE NVNVTYFDGKNMYVPSRKITEITCQDSLLLGTPLYHLPVEEAPESIHVSKVMLLDSPE KITDVIKKLPENIKEKFYVVRSVPYNLEFLQKGVNKGSALASLADKLGVDQSEVMSIG DQENDITMIEYAGMGVAMGNATEHIKEIANYTTTTNNEDGVAQAIQMLILDR" misc_feature 155999..156799 /locus_tag="lmo0158" /note="sugar phosphate phosphatase; Provisional; Region: PRK10513" /db_xref="CDD:182509" regulatory 156885..156924 /regulatory_class="terminator" regulatory 157075..157080 /regulatory_class="ribosome_binding_site" gene 157089..159470 /locus_tag="lmo0159" /db_xref="GeneID:986840" CDS 157089..159470 /locus_tag="lmo0159" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan binding protein" /protein_id="NP_463692.1" /db_xref="GeneID:986840" /translation="MSKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNT VELLDKDGVPQTDFGYYDNMDVHYTWSIPNSTNVKAGDTMDFTLPSQLALATDLAFDV KDSKGQVVGTATVKKATNQVTLVFSDYVEKHSDVKGELDFWTAFNQKVITGNETVDLV FPLENGTTVIDVEVGEKTPVSPTETLFKYGWVDASNPSLIHWVVRVNYAKVNIPNAVF TDIIGAKQTLNFDSIKAFHGTYSADRVFTAGAPISSTNFSATSDGFSVALGNLTDSVQ ISYTTTTTDGGKSTQYDNTAKLAGTDFVTKQTSTWTPASGGGGEGGGTTGSVTLTKED AKTKATLEGAEFKLVDSKGTVLQENITTNASGQLSIADLKFDTYQLIETKAPTGYKLD TTPVEFTIGENNQAITVTKENTLNTGSVELTKLDAATKATLAGATFELQDKEGNTLQT DLKTDENGVLKVTDLVPGSYQFVETSAPTGYKLDNSPVSFEVIAGETDQVVKVTKENT LEVGSVELTKLDSATKATLAGATFELQDKEGNTLQTDLKTDENGVLKVTDLVPGSYQF VETSAPTGYKLDNSPVSFEVVAGETDQVVKVTKENTLEVGSVELTKLDSATKATLAGA TFELQDKEGNTLQTGLTTDENGVLKVTDLVPGTYQFVETKAPIGYELDTTPVSFEIVA GETDPIVKVTKENTLVPPTPVPPTPVPPTPVPPTPVPPTPLPPVPYEPTVPPTKPEVP VTPKKTENSEDSPKTTPIRITQSLPKTGDTNSFAGLGVILIALSLSGLLLKRK" misc_feature 157257..157556 /locus_tag="lmo0159" /note="Bacterial Ig domain; Region: Big_8; pfam17961" /db_xref="CDD:465589" misc_feature 157662..159371 /locus_tag="lmo0159" /note="Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis]; Region: ClfA; COG4932" /db_xref="CDD:443959" misc_feature 159375..159467 /locus_tag="lmo0159" /note="LPXTG-motif cell wall anchor domain; Region: LPXTG_anchor; TIGR01167" /db_xref="CDD:273478" regulatory 159477..159513 /regulatory_class="terminator" regulatory 159649..159654 /regulatory_class="ribosome_binding_site" gene 159663..161378 /locus_tag="lmo0160" /db_xref="GeneID:986846" CDS 159663..161378 /locus_tag="lmo0160" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan binding protein" /protein_id="NP_463693.1" /db_xref="GeneID:986846" /translation="MKERTTMMSNLKKFGLAFLSVILLVNVIFQTNFVKAATNYGSDF LKTVELLDADGNPQTDFGYYDSIKVHYTWEIPNSTNVKEGDTMEFVLPPELKIVTDLD FSLKDHDGNTVGHVIAKKSTGQVVITFTDFVEKNSNISGYLDFWTNWDKSLVEGNENV PVEFPVNGTTETIDVGVGGKNQIDPDESLYKYGWADAENPELIQWVVRVNYSKQNIQN AVYEDFIGPKQVVDFNSIKAFHGEFDPDDNFTPGAEVPSSAITQTTDGFKVDLGNLTD SVKISYYTTSTDNGASPNYTNKGQLTGDNFIKQEIEVATPTSGGGGGGEGTTGSVELT KTDDSSQKNPLEGAEFKLVNGAGATVQTGLKTNADGKLAISNLKYDTYQLIETKAPQG YVLDASPVKFTIDDTHQSLFVSKENTAIKGSVSLEKVDRDTKSLLADAEFELQDKDGN TLKTNLKTDQKGKLTVADLLPGEYQFVETKAPTGYILDTTPLKFKISTEALNVTVTKE NTKKPEIPKVPVPPKKPEKPDKIISEDSKQTALPKTGDSPLVNGWGLLLVAISASGLI ALRRK" misc_feature 159840..160139 /locus_tag="lmo0160" /note="Bacterial Ig domain; Region: Big_8; pfam17961" /db_xref="CDD:465589" misc_feature 160161..>161201 /locus_tag="lmo0160" /note="Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis]; Region: ClfA; COG4932" /db_xref="CDD:443959" misc_feature 160221..160595 /locus_tag="lmo0160" /note="Collagen binding domain; Region: Collagen_bind; pfam05737" /db_xref="CDD:283410" regulatory complement(161375..161413) /regulatory_class="terminator" regulatory 161386..161424 /regulatory_class="terminator" gene complement(161420..162250) /locus_tag="lmo0161" /db_xref="GeneID:986851" CDS complement(161420..162250) /locus_tag="lmo0161" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0161" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463694.1" /db_xref="GeneID:986851" /translation="MNESNGSMELYLREHTEEIINNWLSKIYENTYTSFVYSPQYKDE LRADSEQTADLIISYFAGKKAFFEKLDKWLDNMYARRMENEVPLPEVITTLDKLRREF VTAVGDFCIHNDEVSKCEFSSSMAMVNHGFDRINEAFSAMYYNDIVKHLEQQHRLIEE ISTPVISITDKLAILPLMGRVDRERAEKLSEITANKCVHLGVEQLCIDLSGITYFDDA LGEMLTNLVTMLKLLGVEAFISGIQPKMAQQINRVDLNLSIPAYHSLKAVLQDQTRTI " misc_feature complement(161444..161767) /locus_tag="lmo0161" /note="Sulphate Transporter and Anti-Sigma factor antagonist domain of the 'stressosome' complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation; Region: STAS_RsbR_RsbS_like; cd07041" /db_xref="CDD:132912" regulatory complement(162260..162265) /regulatory_class="ribosome_binding_site" regulatory 162455..162460 /regulatory_class="ribosome_binding_site" gene 162467..163459 /locus_tag="lmo0162" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986854" CDS 162467..163459 /locus_tag="lmo0162" /EC_number="2.7.7.7" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit delta'" /protein_id="NP_463695.1" /db_xref="GeneID:986854" /translation="MGLQDELTMMQPVVMKIFSKSVRENRLSHGYLFEGTRGTGKKRT ALWLAQSLFCLESTETELACGKCTNCTRIASHNHPDVHLLEPDGASIKIDQVRALKQE LSKRGMESDQKVVIIYDAEKMTVQSANSLLKFIEEPEGGLLLLFLTTNPGQILPTIQS RLQPVTFKSLTFDSLLASLTAAGISEQKARIYASITGSVEEAKAFEESEWFSEARNVV IKLYEGIHHQGTSPLIIIQESWMPLFKEKDKMALGLELLLLLYRDRLHLTLDENYEPI CTAQKEMLGQDALRKSLSETTGEIEKILAAKSKLDSNMNTQLLMEQLVLEIQGR" misc_feature 162467..163456 /locus_tag="lmo0162" /note="DNA polymerase III subunit delta'; Validated; Region: PRK08058" /db_xref="CDD:181214" regulatory 163451..163456 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0162" gene 163465..164298 /locus_tag="lmo0163" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986862" CDS 163465..164298 /locus_tag="lmo0163" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0163" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463696.1" /db_xref="GeneID:986862" /translation="MLKIVGVRFKDVGKIYYFSPGELEITENQGVIVENAQGIEFGKT VIEPRYVDEEDVVLPLKKVLRIATEADYKCVAENGDSCQKAFLLCDEKIRERELEMSL VDVDYTFDRNKIIFYFTAEGRVDFRELVKDLASVFRTRIELRQIGVRDEAKLLGGIGP CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYEQAKRE MPDVGVKVKTPEGAEARVSGINLLSRILQVSLPEEETVIEYELDELRPYNEFLKQPAK S" misc_feature 163465..164271 /locus_tag="lmo0163" /note="Cell fate regulator YaaT, PSP1 superfamily (controls sporulation, competence, biofilm development) [Signal transduction mechanisms]; Region: YaaT; COG1774" /db_xref="CDD:441380" regulatory 164295..164300 /regulatory_class="ribosome_binding_site" gene 164309..164698 /locus_tag="lmo0164" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986868" CDS 164309..164698 /locus_tag="lmo0164" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA replication intiation control protein YabA" /protein_id="NP_463697.1" /db_xref="GeneID:986868" /translation="MDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLE NEHLRRRLSLTDEATPEPKAETEAEHGVMAPNRKEAMQQMIELGEGYDNLVQLYKEGF HVCNVHFGSPRGNDEDCLFCLSLLNKK" misc_feature 164309..164680 /locus_tag="lmo0164" /note="Initiation control protein YabA; Region: YabA; pfam06156" /db_xref="CDD:428795" regulatory 164742..164747 /regulatory_class="ribosome_binding_site" gene 164756..165508 /locus_tag="lmo0165" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986872" CDS 164756..165508 /locus_tag="lmo0165" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463698.1" /db_xref="GeneID:986872" /translation="MEKLKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYL PVRKGKIIDLCSGNGIIPLLLSTRTEAQIVGVEIQERLADMAKRSISYNQLEEQIEMI EYDLKNITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVA ASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRIDKEANTVLVEGIKDG KPGVKYVPPVIVYDELGEYTPVIKEILYGESE" misc_feature 164783..165499 /locus_tag="lmo0165" /note="tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; Region: TrmN6; COG4123" /db_xref="CDD:443299" regulatory 165480..165485 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0165" gene 165492..165764 /locus_tag="lmo0166" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986878" CDS 165492..165764 /locus_tag="lmo0166" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GIY-YIG nuclease" /protein_id="NP_463699.1" /db_xref="GeneID:986878" /translation="MAKASEHFFYVLKCSDNSYYGGYTTDVLRREAEHNAGIRCKYTK TRRPVKVIHFEKFETRSEATKAEAAFKKLSRKNKDAYLIQREEESE" misc_feature 165492..165749 /locus_tag="lmo0166" /note="GIY-YIG nuclease superfamily protein; Validated; Region: PRK00329" /db_xref="CDD:178979" misc_feature order(165513..165521,165549..165557) /locus_tag="lmo0166" /note="GIY-YIG motif/motif A; other site" /db_xref="CDD:198403" misc_feature order(165519..165521,165549..165551,165555..165557, 165579..165581,165591..165593,165690..165692) /locus_tag="lmo0166" /note="putative active site [active]" /db_xref="CDD:198403" misc_feature 165690..165692 /locus_tag="lmo0166" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:198403" regulatory 165748..165753 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0166" gene 165761..166642 /locus_tag="lmo0167" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986880" CDS 165761..166642 /locus_tag="lmo0167" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463700.1" /db_xref="GeneID:986880" /translation="MIKSQKSFSGTSQGALYLVPTPIGNLEDMTFRAIRMLKEADIIA AEDTRNTVKLLNHFEITTRMTSYHQFTKENKEDNIIQRMLGGEVVALVSDAGMPSISD PGYELVQSALDANIPVIPLPGANAALTALIASGLAPQPFYFYGFLPRQNKERTQAIEK LAAREETWILYESPHRLKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNW AMDEEIRGEFCLIIEGNSNPQLAEEQLWWQELDIKTHVSTVMEQENVSSKDAIKTVMK ARNLPKREVYSAYHEIK" misc_feature 165806..166462 /locus_tag="lmo0167" /note="16S rRNA C1402 (ribose-2'-O) methylase RsmI [Translation, ribosomal structure and biogenesis]; Region: RsmI; COG0313" /db_xref="CDD:440082" regulatory complement(166635..166681) /regulatory_class="terminator" regulatory 166646..166692 /regulatory_class="terminator" gene complement(166687..166971) /locus_tag="lmo0168" /db_xref="GeneID:986889" CDS complement(166687..166971) /locus_tag="lmo0168" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="AbrB family transcriptional regulator" /protein_id="NP_463701.1" /db_xref="GeneID:986889" /translation="MKSTGMVRKIDELGRVVIPIEIRRTMNLNVKDPLEIFTDEDAII LKKYSAGLVCDVTGEFSVDNKKFVDGKLTLSKEGAAALMEEIKRRFGDTL" misc_feature complement(<166825..166971) /locus_tag="lmo0168" /note="Stage V sporulation protein T C-terminal, transcription factor; Region: SpoVT_C; cl46296" /db_xref="CDD:480636" misc_feature complement(166711..166815) /locus_tag="lmo0168" /note="AbrB C-terminal domain; Region: AbrB_C; pfam18277" /db_xref="CDD:436380" regulatory complement(166979..166984) /regulatory_class="ribosome_binding_site" regulatory 167072..167077 /regulatory_class="ribosome_binding_site" gene 167086..167943 /locus_tag="lmo0169" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986890" CDS 167086..167943 /locus_tag="lmo0169" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glucose transporter" /protein_id="NP_463702.1" /db_xref="GeneID:986890" /translation="MNIVIALIPAVMWGIMPLVVSKIGGKPRQQIIGTTFGALAFAIG VFIFTNPEYTATIIIASFVSGAFWSLGQMNQFRAFTQVGVSKTMPLSTGMQLVGTSLF GVFAFHEWGTTSKLVLGFSALALIIIGIFLTSYQQHKDENSGQNMKKGIITLLISSVG YVGYVVITRWFDISGWDAILPQAIGMVVAGLLFSIKSEEKRFTKQTWLNMIPGVMWAT GNLALLFSNKLVGIATGFSLSQMGVVISTIGGILFLGEKKTKKELILVIIGVVLVIIG GTMIGIAKS" misc_feature 167095..167871 /locus_tag="lmo0169" /note="glucose uptake protein GlcU; Region: glucose_uptake_GlcU; cd23112" /db_xref="CDD:438515" misc_feature 167095..167148 /locus_tag="lmo0169" /note="putative TM1 [structural motif]; Region: putative TM1" /db_xref="CDD:438515" misc_feature 167176..167229 /locus_tag="lmo0169" /note="putative TM2 [structural motif]; Region: putative TM2" /db_xref="CDD:438515" misc_feature 167254..167313 /locus_tag="lmo0169" /note="putative TM3 [structural motif]; Region: putative TM3" /db_xref="CDD:438515" misc_feature 167341..167409 /locus_tag="lmo0169" /note="putative TM4 [structural motif]; Region: putative TM4" /db_xref="CDD:438515" misc_feature 167440..167487 /locus_tag="lmo0169" /note="putative TM5 [structural motif]; Region: putative TM5" /db_xref="CDD:438515" misc_feature 167533..167583 /locus_tag="lmo0169" /note="putative TM6 [structural motif]; Region: putative TM6" /db_xref="CDD:438515" misc_feature 167617..167664 /locus_tag="lmo0169" /note="putative TM7 [structural motif]; Region: putative TM7" /db_xref="CDD:438515" misc_feature 167698..167766 /locus_tag="lmo0169" /note="putative TM8 [structural motif]; Region: putative TM8" /db_xref="CDD:438515" misc_feature 167779..167847 /locus_tag="lmo0169" /note="putative TM9 [structural motif]; Region: putative TM9" /db_xref="CDD:438515" regulatory 167994..167999 /regulatory_class="ribosome_binding_site" gene 168005..169270 /locus_tag="lmo0170" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986891" CDS 168005..169270 /locus_tag="lmo0170" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0170" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463703.1" /db_xref="GeneID:986891" /translation="MIMNANLEVNAELVKESYVYLLSRYLVLRQENFDTKEDKIPYNT LKHNSVSPADANFVNPNFDVVYSEAWIAVDDEHAVVLEVPEIKNRYYTVQLLDGWGEV VTNINERNFPEHPHGKFAFVKKGTNPSIPSDAIKIELPSEKVKVLLRVEQKDDPEGAV KLQKAFKFDAPDNIKIKEPLEIPHFTNAEFLLEEIYSNLEELLATYPDKMPKAAEFQD KARKVAAYIELGDDQKAEVRNLIVKEALPYFTNGAKGFGTQKGGWSVTYVAGAFENDI LARAIINYGGIWANSIQEALYFIGQKGTDDELLTGDKIYKIHFSADELPAELANAFWS VTLYSVPDYHVIPNELNKFCINNYTGPKLSEDGSLTLYIASEKPADVDPGNWLPSKAG KEFSLNFRLYVPKKEVLEGKVFLPPLEVF" misc_feature 168041..169261 /locus_tag="lmo0170" /note="Uncharacterized conserved protein [Mobilome: prophages, transposons]; Region: COG5361" /db_xref="CDD:444136" regulatory 169283..169326 /regulatory_class="terminator" gene 169510..172008 /locus_tag="lmo0171" /db_xref="GeneID:986893" CDS 169510..172008 /locus_tag="lmo0171" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_463704.1" /db_xref="GeneID:986893" /translation="MRKIPVVVSLALCFSLVSPSLYASADTITAVQITKEATTDTTEP TTIDQPSRMDNSQTAPQKMTASSSEEAATTNSTEEENTPKNNLKSTSENSKTYAELFP DVNLAKIIAKNISGTEDINAEVSEAELQTITNLVATNQNITSLTGIEHLTALENINVN NNELTTIDSLFNIPTLKSISANNNKITGNFSLVKTLPELHTLEVLGNAITELDIENQP NLVTLSADELELKKLTLKNLSQLNGLGRIASSISIDWGDLESVTLMNLPEIISVDISG NYLDSDDIHLENLPAVKNLDISSNELTRLPKINDFPLLTTINVRSNKIDRLESSKLVD VPKLATLNADKQAVTLSKTIAAGNFTIPNNVENLAGQMVTPKIISNNGTYSDQSIAWA SGELSGLSKVSYTFDEVINSPAIAGKYTGTVNQPIEVKAVPVIVADKSVSYAPVNAKD EATFLQDIRASASENAQITSDYSEVVDFATPGDYTVTLHAKNEFDLKADPVTVVVHIN DIQKPQVAVNSNDISFEVGTELTSEVLLAKSGAVVTDLYDEAIKMEVDLSEVDSSKLG TYEATIIAKSKSGASSDPIKLSVKIVDTEKPIIQINNPEIIIEKGSELTEGQIIDQVG ITATDNYDQDLNIHMDLSKVDTSKPGSYEVTIYTEDSSGNRSETVTITVKVPEARIGK ITIQYMDSENNELAESNTITGEVGETYETLAKEIEGYTLKENPANSSGVFEETRQTIQ YIYVKDIINPEFPVYSENNVTPELPSNNNNSVNGSRQTPSKSVKKQSKAYSKINQMPM NLPETGDSTNLLFIFMGVLLLAGLTLSKAKRKNQ" misc_feature 169666..170709 /locus_tag="lmo0171" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 169969..170034 /locus_tag="lmo0171" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 170035..170112 /locus_tag="lmo0171" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 170167..170229 /locus_tag="lmo0171" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 170230..170313 /locus_tag="lmo0171" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 170314..170382 /locus_tag="lmo0171" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 170383..170448 /locus_tag="lmo0171" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 170449..170520 /locus_tag="lmo0171" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 170806..171030 /locus_tag="lmo0171" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature 170953..171189 /locus_tag="lmo0171" /note="LapB C-terminal region repeat; Region: LapB_rpt_80; NF033932" /db_xref="CDD:468252" misc_feature 171304..171534 /locus_tag="lmo0171" /note="Domain of unknown function (DUF5011); Region: DUF5011; pfam16403" /db_xref="CDD:435320" misc_feature 171559..171738 /locus_tag="lmo0171" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 171907..172002 /locus_tag="lmo0171" /note="LPXTG-motif cell wall anchor domain; Region: LPXTG_anchor; TIGR01167" /db_xref="CDD:273478" gene complement(172072..172458) /locus_tag="lmo0172" /pseudo /db_xref="GeneID:986894" misc_feature complement(172072..172458) /locus_tag="lmo0172" /pseudo regulatory 172073..172127 /regulatory_class="terminator" gene 172171..172268 /locus_tag="lmos04" /db_xref="GeneID:18245112" misc_RNA 172171..172268 /locus_tag="lmos04" /product="rli23" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245112" gene complement(172410..172931) /locus_tag="lmo0173" /pseudo /db_xref="GeneID:986908" misc_feature complement(172410..172931) /locus_tag="lmo0173" /pseudo gene complement(172903..173208) /locus_tag="lmo0174" /db_xref="GeneID:986910" CDS complement(172903..173208) /locus_tag="lmo0174" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_463705.1" /db_xref="GeneID:986910" /translation="MSTRVMYPAEIKEKAIKMKLAGKSTKEIMRTLNIKNPTQVKTWW RWYRNEETHRFHQGVGKQYKYQKGVPELPEIEQLKIALRQKELELEILKKYKALERK" misc_feature complement(<173059..173175) /locus_tag="lmo0174" /note="Helix-turn-helix domain; Region: HTH_28; pfam13518" /db_xref="CDD:463908" regulatory complement(173216..173221) /regulatory_class="ribosome_binding_site" gene complement(173309..174556) /locus_tag="lmo0175" /db_xref="GeneID:986928" CDS complement(173309..174556) /locus_tag="lmo0175" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan-binding protein" /protein_id="NP_463706.1" /db_xref="GeneID:986928" /translation="MFNKKKTIASLIVLSSLASQIALTPISALADTHDTNNIALLQNT NENVPYKYTSTLTFPTLTNQTQEDYKLEIKLALPSGMNYTDLQVSVGGEDITNQVGTT SFDNSTNTVTFKFDKVTSWDSLSKAKVKFDWKTSYSGEGGEAKIDSLVATATATSEDK AGNKSTSTGSLKPKDISAPVVKAEETEITYSPGSDVTEEQFLTDIHASVTDNYDSTIS LTSNFTSAVNLAVSGDYSVNVQATDKAGNVSNTLNVTVHVSTPAPVAGANITVNHLDS NGNKIAESDTLTGVVNSNYQSESKKITGYTLETTPTNATGTFTDTPQTVDYIYKKDTV TPTPITVNPVEPVKPVNPVVNKPVTVKPANDNTNPSTSNSVEKTTYSSLPTTGDTDQS KSSTIFGALLLLISAPLLLFKKK" misc_feature complement(173783..174022) /locus_tag="lmo0175" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature complement(173567..173749) /locus_tag="lmo0175" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" regulatory complement(174568..174573) /regulatory_class="ribosome_binding_site" regulatory 174820..174825 /regulatory_class="ribosome_binding_site" gene 174834..175694 /locus_tag="lmo0176" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986935" CDS 174834..175694 /locus_tag="lmo0176" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glucose transporter" /protein_id="NP_463707.1" /db_xref="GeneID:986935" /translation="MNIMIALIPALLWGTVPLIITKFGGSTRQQTMGMTLGALTFAVI VFFFTDPVYTLKTVGISFITGCLWTVGQMFQLQAFKIIGVSKAMPISTGMQLVGTTLC GVILFHEWDTTLRIILGFIALALIVGGIFLTSYAEKEEDGTNALKQGLITLFISACGY VGLVVLIQGFKIDGINAILPQAIGMVISALIMTHSGGTEKRFNKRTLLLTIPGVIWAA GNVAMVHANQLVGVATGFSLSQLGVVISTIGGIILLKEKKTQKEMLFVIVGVVLVVLG GILIGVAKGA" misc_feature 174843..175628 /locus_tag="lmo0176" /note="glucose uptake protein GlcU; Region: glucose_uptake_GlcU; cd23112" /db_xref="CDD:438515" misc_feature 174843..174896 /locus_tag="lmo0176" /note="putative TM1 [structural motif]; Region: putative TM1" /db_xref="CDD:438515" misc_feature 174924..174977 /locus_tag="lmo0176" /note="putative TM2 [structural motif]; Region: putative TM2" /db_xref="CDD:438515" misc_feature 175002..175061 /locus_tag="lmo0176" /note="putative TM3 [structural motif]; Region: putative TM3" /db_xref="CDD:438515" misc_feature 175089..175157 /locus_tag="lmo0176" /note="putative TM4 [structural motif]; Region: putative TM4" /db_xref="CDD:438515" misc_feature 175188..175235 /locus_tag="lmo0176" /note="putative TM5 [structural motif]; Region: putative TM5" /db_xref="CDD:438515" misc_feature 175278..175328 /locus_tag="lmo0176" /note="putative TM6 [structural motif]; Region: putative TM6" /db_xref="CDD:438515" misc_feature 175362..175409 /locus_tag="lmo0176" /note="putative TM7 [structural motif]; Region: putative TM7" /db_xref="CDD:438515" misc_feature 175446..175514 /locus_tag="lmo0176" /note="putative TM8 [structural motif]; Region: putative TM8" /db_xref="CDD:438515" misc_feature 175527..175595 /locus_tag="lmo0176" /note="putative TM9 [structural motif]; Region: putative TM9" /db_xref="CDD:438515" regulatory 175752..175757 /regulatory_class="ribosome_binding_site" gene 175766..177760 /gene="metS" /locus_tag="lmo0177" /db_xref="GeneID:986940" CDS 175766..177760 /gene="metS" /locus_tag="lmo0177" /EC_number="6.1.1.10" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="methionyl-tRNA synthetase" /protein_id="NP_463708.1" /db_xref="GeneID:986940" /translation="MPEEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGY DVFYLTGTDEHGQKIQAKAKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDR HKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAPS GNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVS RTTFDWGIKVPGNPKHVVYVWIDALSNYITALGYNTDNDTKFQKYWPADVQIVGKEIV RFHTIYWPIMLMALDLPLPKMVFGHGWILMKDGKMSKSKGNVVDPYMLIDRYGLDALR YYLLREVPFGSDGLFTPEDFVDRVNFDLANDLGNLLNRTVAMINKYFDGEIPAYQGNV TEFDQILVDFKNNVVKEYEGSMDHMQFSVALNQLWSLISRTNKYIDETAPWALAKDED KRTELASVMTHLAENLRIIAVLLQPFLTRTPGEIFLQLGLQEENLKKWDSIYGYGEIP AGTTVVKKGTPIFPRLDAEVEVTYIQDEMKGSAPAPAEEVAEVEALETPQIGIEDFDK IDLRVAEVKQVDKVKKADKLLCFQLDLGEGKLRQVLSGIAEFYQPEELIGKKVIVVSN LKPVKLRGLMSEGMILSGEKDGKLSVIEASSALPNGAKVK" misc_feature 175772..177757 /gene="metS" /locus_tag="lmo0177" /note="methionyl-tRNA synthetase; Reviewed; Region: PRK12267" /db_xref="CDD:237028" regulatory 177768..177807 /regulatory_class="terminator" regulatory 177912..177917 /regulatory_class="ribosome_binding_site" gene 177924..179138 /locus_tag="lmo0178" /db_xref="GeneID:986964" CDS 177924..179138 /locus_tag="lmo0178" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="xylose repressor" /protein_id="NP_463709.1" /db_xref="GeneID:986964" /translation="MDILRKGNKDLIKDINRYTVLNLIREKGEITRTEIAKKCDFGMS TLTYILDDLQQEGIILEGAETSSTGGRRAKLVRFNKDYGFVVSVKVEEEQLLFALTDL NAEIIENTSIPFSSEKKPEEAIELIAKNVKKMCGNRDMNHLLGVGIAISGLVNRKKGT VIRSTMLGWENVALEAMLHAHFPDIPVYVDKNINCYTLAELWLGEGKQSNNFATVSVG AGLGLSVVINRQIYYGAQGGAGEFGHTTIQPGGYKCHCGQKGCLEMYASEFYFRNRGE ELKEAYPTSELNDFHFDKVAKSARAGDEMATELMGKMGEYLGYGIRNIINTFNPEKVI IVGEGLHHRDLFLTKIDEIASQNFFSGAGFETEITTTSLEDPAWLQGAALLVIHQLFQ VPIYEEEQTLLR" misc_feature 177960..>178154 /locus_tag="lmo0178" /note="Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to...; Region: HTH_ARSR; cl46857" /db_xref="CDD:481197" misc_feature 178170..179096 /locus_tag="lmo0178" /note="ATPase-like domain of Listeria monocytogenes Lmo0178 and similar proteins; Region: ASKHA_ATPase_ROK_Lmo0178-like; cd24071" /db_xref="CDD:466921" regulatory 179158..179163 /regulatory_class="ribosome_binding_site" gene 179174..180052 /locus_tag="lmo0179" /db_xref="GeneID:986967" CDS 179174..180052 /locus_tag="lmo0179" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_463710.1" /db_xref="GeneID:986967" /translation="MVGMTRKKTLFWLCIFLLPNLLGFLIFIAIPILGSLGISFTDWD LVSTIHFTGFENYKRLFNDPEFWKSFRNTITFIIGYLPSVMILGLACALMLNQKIKLR PFFRAVYFLPVITSWVAVSLVWKWLFNPSYGLINYFLSLIGIAGPNWLTDPQTAMIAV IITSAWKDIGFVMVLFLGGLQNISPSYYEAANMDGASKLRQLFSITIPLLTPTTFFVT IISLINSFQVFDQVMIMTEGGPSGATMTLVQNIYNHAFRYFEMGYASAMSWILFIVIF IITIIQNKLQKRWSNY" misc_feature 179189..180040 /locus_tag="lmo0179" /note="ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpA; COG1175" /db_xref="CDD:440788" regulatory 180035..180040 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0179" gene 180052..180900 /locus_tag="lmo0180" /db_xref="GeneID:986972" CDS 180052..180900 /locus_tag="lmo0180" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_463711.1" /db_xref="GeneID:986972" /translation="MKTEKSGSPKWQLFKNILTYTIICLGGIIMLMPFVWMVSTAFKT GAANMVLPPQFIPKEPTTANFTQVFEMFPMLRFLVNSVIVAVVTTLGQMLFCSMAAYA FARIPFWGRDKLFLLYLATMMVPAQVTMIPQFILMKQFGWLDSYAGLIVPALFSVFGT FLLRQAFMGIPKELEEAAFMDGANHFTIFRKVILPLAKPTFATLGILTFMQSWNSYLW PLIVTSSQEMATLPLGLSLLQGRYGTNYGLMMAGVLISVIPILAVYLFAQKYFIQGMA MSGMKE" misc_feature 180052..180897 /locus_tag="lmo0180" /note="ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpE; COG0395" /db_xref="CDD:440164" regulatory 180915..180920 /regulatory_class="ribosome_binding_site" gene 180928..182184 /locus_tag="lmo0181" /db_xref="GeneID:986977" CDS 180928..182184 /locus_tag="lmo0181" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter substrate-binding protein" /protein_id="NP_463712.1" /db_xref="GeneID:986977" /translation="MKKGLLLLMVVVLSVFGLSACGGGSSSGDKTEITYYQFSAPADG KALDEMVKEFEKQNPDIKVNVQTIAFNDYFTKLQTQIAGGDAPDAFELNYETFMQYAE KGVLADLTSYIEKDKDFDPSTLNKQAYDAFKYDGKQYGMVESFSNVVTIYNKDLFDKA GVEYPTADWTWKDEEAAAKKLTDAKNKVWGTSQPVTMNEFYKVAAQNGGSIFNEDLTE TTINSPENVEALTHLTNEVTDSKVAPSPADLSGQLPEDLFMNGQIAMLHTGIWLFDMF QDAPFKWDVQVEAGNTQKATHFFANGIGVSKDSDKKEAAFKFASFMSANEEAAKIRID NNWELPATENKEILQPYLDATPPDNREAVFESLQYMVLPPVVKDWNKISDYTNSEFEK VLNGDSTPEKALKNSEDNINKTMGFK" misc_feature 181021..182160 /locus_tag="lmo0181" /note="The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold; Region: PBP2_TMBP_like; cd13585" /db_xref="CDD:270303" misc_feature order(181357..181359,181363..181365,181732..181734, 181738..181740,181822..181830,181957..181959) /locus_tag="lmo0181" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270303" regulatory 182255..182260 /regulatory_class="ribosome_binding_site" gene 182267..185569 /locus_tag="lmo0182" /db_xref="GeneID:986983" CDS 182267..185569 /locus_tag="lmo0182" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alpha-glucosidase" /protein_id="NP_463713.1" /db_xref="GeneID:986983" /translation="MSKFTKLMQGYLHLIEGKNEKIKPILLETKPNFTTDSVLETASW LWLSSKINHYDREEVEPVIAFLVENWNRPEKSIWGSAENDIYLATISSVYSALLDVKN TFPKPELQQTITIIRDYCFDNLLKGDSILTGFNTRKVSTDQLLSVLPFGLFSPEDLVM VAAVGKMEQQLVQDDGVLPYSGAPRVNSFATALMALYFLEKSDQDKALHYLNMAMKME DNDELGAIFIEINQAFRAMESEVTAHISHDPFGHENRYEQQLTERTPHYPETEMHFSA ACEVISEVEPIQVELVLKEKDWTILCEKKEKNDVQIWEALVPPLEEVGEYTYYFQATM KDQTTLTSDDYKVEPIWKHWSEEAAICETEQGLMVLFKENPSSIIPVEFTVKSDELVI GLKPSFEASNVKTKSSGQLKKDDLEIIVSNNPVRLEVHFKGKLILESHKIYPALQWYT DKTGTINKVKLHLDAPKEEEYYGFGERYNALGQRGNVLDCFVYNQYRDQGTRTYIPMP FYHTNRDYSVFVDTARYTSFDLGNQLADKHTITVEINGCDTDICLLMGDIRSAVANYM KKTGKPAMVPVWALGPWMSSNNWDRESVVRNEVETTQELQIPSTVVVLEQWSDEATYY MFNDAEYDEKAPSEAYSYDEIRFPSWGRWPDPKGMVDYIHDNKMKLILWQIPIQKYLN RQQHPLKDREEAYMIEKGYVVKNPDGSPYRIPENWFTESLIMDFSNEEGKKWWFDKRQ YLIDIGVDGFKTDGGEFVFGEGLQFADGRRGDEMRNLYPNDYVEAYYQFAQQNEGMTF SRAGYTGAQNFPAHWAGDERSTFDAFRRSLIAGLSAGFSGIPFWSFDFAGFNGDIPTA ELFIRSAEMATFCPIMQYHAESKAEFNQDRTPWNIASRTGDDSVIPIYRHFANVRMNI LPYIYNESLKCVETGLPMMRALLLDYKEDPRVSDMYDQYLFGEAMLIAPVIEDGVRSR EVYLPEGTWYDFWNGTKVSGPTLRKCKADKEEIPVFVRGGKAVLCNVDATLKLGSWVG NTVEEYDTPLLKVYLDGDFTEEITDHLFGKWLVKVTENADEVIVSVQTNTASYEVEVI GTTKKVQIKKGR" misc_feature 183629..183976 /locus_tag="lmo0182" /note="N-terminal domain of glycosyl hydrolase family 31 (GH31); Region: GH31_N; cd14752" /db_xref="CDD:270212" misc_feature 183746..183748 /locus_tag="lmo0182" /note="active site" /db_xref="CDD:270212" misc_feature 183974..185005 /locus_tag="lmo0182" /note="CtsY (cyclic tetrasaccharide-synthesizing enzyme Y)-like; Region: GH31_transferase_CtsY; cd06597" /db_xref="CDD:269883" misc_feature order(184025..184027,184109..184114,184124..184126, 184133..184135,184283..184285,184415..184417, 184523..184525,184664..184666,184712..184714, 184811..184813,184895..184897) /locus_tag="lmo0182" /note="active site" /db_xref="CDD:269883" regulatory 185560..185565 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0182" gene 185572..187863 /locus_tag="lmo0183" /db_xref="GeneID:987006" CDS 185572..187863 /locus_tag="lmo0183" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alpha-glucosidase" /protein_id="NP_463714.1" /db_xref="GeneID:987006" /translation="MDASTSFAILPSNVKQKTAFERKVNQVKAASWTNNCLTGTLDIG QFSCYFVNEKIARVTVNPFGEVDLTPSIAAIHDNEKQAAKFTETNDCYELHFADKEVI VCKNPFQIIMKQAGKRIFQTEGLAINRDKEHQISIQSEPGTAIFGLGEKTGALNKAGS IISMWNTDVYSPHNKDTVELYQSIPFMIADTAKTTYGLFYDNSHRTEFDFQSFEEMYT VLAEGGQANLYIIFGEDVKEVVANYTDLTGKTPLPPKWSLGYHQSRYSYTSEEEVERI ANTFKEKEIPLDCVFMDIHYMDDFRVFTFNPDTFPNGPELIARLREQNIDVVPIVDPG IKKDVDYSVYQEGIKNNYFCTKLEGSIYYGDVWPGVSAFPDFLSTTVQHWWGSLHKFY TDLGIRGIWNDMNEPSVFNESKTMDLDVVHNLDGKNVTHKEAHNLYGLYMSKATFEGL KRLVPNERPFSLTRAGYAGVQRYSAVWTGDNRSHWEHLEMSLPMIMNLGLSGVAFTGA DVGGFSSDCTKEMLIRWTQAGAFLPYFRNHCVQDSIYQEPWAFGADAEKIVKQYIELR YAFLPYIYTEFQKTAESGLPLVRPLYMEFKDERDLIQVNDQFMLGENILVAPIVREGQ AKRLVRLPKGLWFNYWTKEQFVGGDYIIADAPIDTMPIYIKAGTILPVGSSVQNTKET QELTLEVYLDSETATGYVYNDDGKSYQYESGAVSKTTLTATFKNGEVLINATHQGEAN LQQKVTTIQVFGEKIDKITRAGI" misc_feature 185674..185961 /locus_tag="lmo0183" /note="Alpha-glucosidase, N-terminal; Region: AGL_N; pfam16338" /db_xref="CDD:465098" misc_feature 185971..186315 /locus_tag="lmo0183" /note="N-terminal domain of glycosyl hydrolase family 31 (GH31); Region: GH31_N; cd14752" /db_xref="CDD:270212" misc_feature 186073..186075 /locus_tag="lmo0183" /note="active site" /db_xref="CDD:270212" misc_feature 186256..187581 /locus_tag="lmo0183" /note="Glycosyl hydrolases family 31; Region: Glyco_hydro_31; pfam01055" /db_xref="CDD:460044" misc_feature 187621..>187767 /locus_tag="lmo0183" /note="Domain of unknown function (DUF5110); Region: DUF5110; pfam17137" /db_xref="CDD:465360" regulatory 187849..187854 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0183" gene 187867..189528 /locus_tag="lmo0184" /db_xref="GeneID:987008" CDS 187867..189528 /locus_tag="lmo0184" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oligo-1,6-glucosidase" /protein_id="NP_463715.1" /db_xref="GeneID:987008" /translation="MKEKDWWKKSVVYQIYPKSFNDSNGDGVGDIQGIIEKLDYLKEL GVDVIWLSPVYDSPQDDNGYDIRDYQKIYEEYGDMATFDQLLQGLHDRDMKLVMDLVV NHTSDEHKWFEESRKSKDNPYRDYYFWREENEINNWGSIFSGPAWELDEKTGEYYLHL FSKKQPDLNWENPKLRQDVYNMMKFWLDKGIDGFRMDVINFISKNTDFPDGPVPDGQI YGDAGNDFCNGPRIHEFLQEMNQEVTSKYDVMTVGEMPGASTTDAQIYTNPANNEVDM IFTFEHMNLDSDSDNKWDLKPIYLPDLKENMSEWQVALQENGWNSLYWNNHDQPRIVS RFGNDNRFRVRSAKMLATCLHMMKGTPYIYQGEEIGMTNVHFETLDDYRDIETLNMYK ERKEQGHSHESIMQSIYTKGRDNARTPYQWDNSENAGFTTGTPWLKVNPRYTEINNEE ALKNPDSIFYYYQNLIKLRKTTEIITTGNYRLLLPKDEAIFAYERYTENEKLVVLCNF TEEEQVISDETILNEIQKGSVLVNNVPNIIEGTLRPYEAIVYQIK" misc_feature 187888..189276 /locus_tag="lmo0184" /note="Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins; Region: AmyAc_SI_OligoGlu_DGase; cd11333" /db_xref="CDD:200472" misc_feature order(187930..187932,187936..187938,187942..187944, 187954..187956) /locus_tag="lmo0184" /note="Ca binding site [ion binding]; other site" /db_xref="CDD:200472" misc_feature order(188047..188049,188056..188058,188167..188169, 188176..188178,188290..188292,188347..188349, 188359..188361,188455..188457,188626..188628, 189103..189105) /locus_tag="lmo0184" /note="active site" /db_xref="CDD:200472" misc_feature order(188455..188457,188626..188628,188848..188850) /locus_tag="lmo0184" /note="catalytic site [active]" /db_xref="CDD:200472" misc_feature 189298..189507 /locus_tag="lmo0184" /note="Maltogenic Amylase, C-terminal domain; Region: Malt_amylase_C; pfam16657" /db_xref="CDD:435493" regulatory 189540..189570 /regulatory_class="terminator" regulatory 189612..189617 /regulatory_class="ribosome_binding_site" gene 189625..190398 /locus_tag="lmo0185" /db_xref="GeneID:987009" CDS 189625..190398 /locus_tag="lmo0185" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463716.1" /db_xref="GeneID:987009" /translation="MLFDTHVHLNDEAFDDDIEEVIKRAQENDVTRMAVVGFNKETID RALELAEKYDFISLIVGWHPTDAITFTDEDLEWLRDLALTHPKVVALGEMGLDYHWDT SPKETQFEVFRKQIRLAKEVNLPIVIHNREATEDVVRILQEEHAEEVGGIMHCFGETV EVMEACLAMNFYISFGGTVTFKNAKLPKIAAQAIPIDRLLIETDAPYLAPTPNRGKRN EPGYVKLVAEKIAELKEMKYSEIATHSTENAKRLFRIKD" misc_feature 189628..190389 /locus_tag="lmo0185" /note="3'->5' ssDNA/RNA exonuclease TatD [Cell motility]; Region: TatD; COG0084" /db_xref="CDD:439854" regulatory 190679..190684 /regulatory_class="ribosome_binding_site" gene 190690..191916 /locus_tag="lmo0186" /db_xref="GeneID:987011" CDS 190690..191916 /locus_tag="lmo0186" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463717.1" /db_xref="GeneID:987011" /translation="MTMENSSNVAQSSKWKLPIMIAGFVIVVALVFYFVFEGTKNDIT IVNAGEKIESRTHAKTVSEALDEAGIKVSERDEIAPGKNAEIKDGMEIKYLPARQITI NDNGTKKDVWSTKANVADLLKDENITTRPQDVLNVALDTKLKNGLEVNINRAIQLSLQ NGAKKDTVWTTKTKVSDLLAEKNIKLDQDDRVSPAKDSNLKEKMTVEVTYVNSKAEKK NEQVKFETVYKEDDSLNKGVEKVVQEGKNGKKVVEYKVTFENGKEKKRDVIKENVTSN KTDKVVVRGTKEKVVATPVSNVSTSSATSSSSSSASSTPSGGKTYKMESTAYSGGGTT AYGINLSANPGLKVIAVDPRIIPLGSKVWVEGYGEAIAGDTGGAIKGNIVDVYFPNES QCYSWGRRMVTVKVLN" misc_feature 190723..191889 /locus_tag="lmo0186" /note="Uncharacterized conserved protein YabE, contains G5 and tandem DUF348 domains [Function unknown]; Region: YabE; COG3583" /db_xref="CDD:442802" misc_feature 190987..191109 /locus_tag="lmo0186" /note="G5-linked-Ubiquitin-like domain; Region: DUF348; pfam03990" /db_xref="CDD:461121" regulatory 191930..191963 /regulatory_class="terminator" regulatory 192004..192009 /regulatory_class="ribosome_binding_site" gene 192018..192593 /locus_tag="lmo0187" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987012" CDS 192018..192593 /locus_tag="lmo0187" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463718.1" /db_xref="GeneID:987012" /translation="MSGKPVIHEFIVVEGRDDTTAINRSVIADTIETNGSALSQETIE KIRHAQELRGVIIFTDPDFPGEKIRKQIDSAVPGCKHAFINRQDALPKAGRGLGVEHA SSANIREALENFHTSGAPTEKQFISKDILVHLGLLGGVGAKERREKIGNILKIGYTNG KQLQTRLESFAISEEQLVAACQKIMQEEENE" misc_feature 192018..192575 /locus_tag="lmo0187" /note="5S rRNA maturation ribonuclease M5, contains TOPRIM domain [Translation, ribosomal structure and biogenesis]; Region: RnmV; COG1658" /db_xref="CDD:441264" regulatory 192574..192579 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0187" gene 192586..193473 /gene="ksgA" /locus_tag="lmo0188" /db_xref="GeneID:987014" CDS 192586..193473 /gene="ksgA" /locus_tag="lmo0188" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin" /codon_start=1 /transl_table=11 /product="dimethyladenosine transferase" /protein_id="NP_463719.1" /db_xref="GeneID:987014" /translation="MSKDIATPGRTTEILKKYGFLFKKSLGQNFLIDSNILTRITDTA EITKETNVIEIGPGIGALTEQLAKTANEVVAFEIDQRLLPILDDTLSAYNNVKVVHGD VLKADVEEVIAEQFAKPELPLKIVANLPYYVTTPIILKLLHDNIPADSMTFMLQKEVA DRISAVPSTKSYGSLTIAIQFYMEAELAFIVPKTVFMPQPNVDSAVIHLKRRKEPLAE VNDEEFFFEVTRASFAQRRKTLWNNLASKFPALKPRKDELVEGLNAIGIDLIRRGETL DIPEFAKLSNFLGDFLKEK" misc_feature 192631..193455 /gene="ksgA" /locus_tag="lmo0188" /note="16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity) [Translation, ribosomal structure and biogenesis]; Region: RsmA; COG0030" /db_xref="CDD:439801" regulatory 193580..193585 /regulatory_class="ribosome_binding_site" gene 193593..193850 /locus_tag="lmo0189" /db_xref="GeneID:987015" CDS 193593..193850 /locus_tag="lmo0189" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Veg protein" /protein_id="NP_463720.1" /db_xref="GeneID:987015" /translation="MPKTIASIKTNLDSRLGKALTLKANGGRKKTIERCGILAETYPS VFIVELDQDENNFERVSYSYTDILTDAVELVFTDDNKELAL" misc_feature 193593..193847 /locus_tag="lmo0189" /note="Uncharacterized conserved protein Veg, DUF1021 family [Function unknown]; Region: COG4466" /db_xref="CDD:443563" regulatory 193865..193898 /regulatory_class="terminator" regulatory 193974..193979 /regulatory_class="ribosome_binding_site" gene 193989..194870 /gene="ipk" /locus_tag="lmo0190" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987016" CDS 193989..194870 /gene="ipk" /locus_tag="lmo0190" /EC_number="2.7.1.148" /experiment="EXISTENCE:[PMID:19448609]" /note="An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis" /codon_start=1 /transl_table=11 /product="4-diphosphocytidyl-2-C-methyl-D-erythritol kinase" /protein_id="NP_463721.1" /db_xref="GeneID:987016" /translation="MKISITAPAKINLSLDALYKREDGYHEVEMVMTTIDLADRLYLE RLDEDKIVLDVKAHFIPEDRRNLIYQAALLLKKRFDVKMGVRITIDKHIPVSAGLAGG SSDAAAALKGLNVIWELGLSIEELAEISSEIGSDIAFCVYGGTALATGRGEKISALPN IPGCWIVLAKPSISVSTPTIYKELQVDNVEHPDTQKMIESIKNGDLDGIFAATGNVLE SVTLEKNPQVKRIKDRMLAFGAEAALMSGSGPTVFALIKQYSRAKRVYNGLRGFCEEV YMVRPWSEGENDTNINY" misc_feature 193992..194828 /gene="ipk" /locus_tag="lmo0190" /note="4-diphosphocytidyl-2C-methyl-D-erythritol kinase [Lipid transport and metabolism]; Region: IspE; COG1947" /db_xref="CDD:441550" regulatory 194877..194882 /regulatory_class="ribosome_binding_site" gene 194892..195629 /locus_tag="lmo0191" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987017" CDS 194892..195629 /locus_tag="lmo0191" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phospho-beta-glucosidase" /protein_id="NP_463722.1" /db_xref="GeneID:987017" /translation="MKIIFNADDFGISPGAVYGILESYKRGVVKSTTLLANSPAFDLA VEVAKENPGLDIGAHLTLTFGSPVLQGLETLTDDDGRFRRNYTSLENGLADVDMNEVE RELTAQIEKILDAGITISHFDTHHSIEPLIYPVQHKLAEKYGVSIRRHSDVSDFGAIK TPDLFATEFYADGVSFETIKKLVQKHIGTNDVVEVMTHPAFIDETLREISSYVEPRIK EVSILTSRELQAYLGQQEVEIISFRDL" misc_feature 194895..195575 /locus_tag="lmo0191" /note="Enterococcus faecalis EF3048 and similar proteins; Region: YdjC_EF3048_like; cd10803" /db_xref="CDD:212114" misc_feature order(194913..194924,195060..195068,195249..195266, 195483..195485,195537..195539) /locus_tag="lmo0191" /note="YdjC motif; other site" /db_xref="CDD:212114" misc_feature order(194913..194918,194922..194924,195060..195062, 195066..195068,195252..195254,195258..195260, 195264..195266,195483..195485,195537..195539) /locus_tag="lmo0191" /note="putative active site [active]" /db_xref="CDD:212114" misc_feature order(194931..194933,194997..194999,195006..195020, 195123..195128,195132..195134,195198..195200, 195222..195224,195231..195233) /locus_tag="lmo0191" /note="putative homodimer interface [polypeptide binding]; other site" /db_xref="CDD:212114" regulatory 195639..195676 /regulatory_class="terminator" regulatory 195780..195785 /regulatory_class="ribosome_binding_site" gene 195793..196611 /locus_tag="lmo0192" /db_xref="GeneID:987018" CDS 195793..196611 /locus_tag="lmo0192" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PurR family transcriptional regulator" /protein_id="NP_463723.1" /db_xref="GeneID:987018" /translation="MKIRRSERLIDMTQFLLSHPRKLVPLTMFAERYGSAKSSISEDL VIIKKTFEDRGIGTLETVPGAAGGVQYISIAGNDDVLDFVHTLCNRIAEPNRLLPGGY LYLSDLLGEPVTLKAIGKILATKFNNQKIDAIMTVATKGIPIAQAVAEHLSVPFVIVR RDSKVTEGSTVSINYVSGSSKRIEKMELSKRSLAEGSNVVIVDDFMKAGGTINGMKNL LEEFNAHLVGIGVLVESEYAEERLVDDYVSLVKIKNVNMKEKQIEVVDGNYFNS" misc_feature 195802..196602 /locus_tag="lmo0192" /note="pur operon repressor, Bacillus subtilis type; Region: purR_Bsub; TIGR01743" /db_xref="CDD:130804" regulatory 196619..196650 /regulatory_class="terminator" regulatory 196771..196776 /regulatory_class="ribosome_binding_site" gene 196786..197463 /locus_tag="lmo0193" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987019" CDS 196786..197463 /locus_tag="lmo0193" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0193" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463724.1" /db_xref="GeneID:987019" /translation="MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQ GDMKINATGTGAISPVNTQVPDYDELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTY TGKVKEIAEQGQVQNGVSSFSVIISLDKTDDLKAGMTADASILVNEKKDALYVPIEAV QKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETS TVPGAPS" misc_feature <196969..197421 /locus_tag="lmo0193" /note="Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms]; Region: AcrA; COG0845" /db_xref="CDD:440606" regulatory 197499..197504 /regulatory_class="ribosome_binding_site" gene 197512..198204 /locus_tag="lmo0194" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987020" CDS 197512..198204 /locus_tag="lmo0194" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding protein" /protein_id="NP_463725.1" /db_xref="GeneID:987020" /translation="MPKPLIDMKNLTKTYTLGGETFKALDDVTFTVEQGEFLSIVGPS GSGKSTLMNMIGCLDVPDEGSYHLDDVDVFKLSDNKLSEIRNKKIGFIFQQFNLLPKL SAFENVELPLIYAGLSVSAREKAAIECLEKVGLLEKRRNLPTQLSGGQQQRVAIARAL AGKPQILLADEPTGALDSKTGKEVMGILQELNRAGNTIVMITHDPTIASYGTRSIRIQ DGKLFHEEATQA" misc_feature 197518..198192 /locus_tag="lmo0194" /note="ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]; Region: LolD; COG1136" /db_xref="CDD:440751" regulatory 198185..198190 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0194" gene 198201..199409 /locus_tag="lmo0195" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987022" CDS 198201..199409 /locus_tag="lmo0195" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_463726.1" /db_xref="GeneID:987022" /translation="MNVLQSMKMAWKQLKASKLRSFLTMLGIIIGVASVILLVSLGNG VTQEVDDQMGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNAT FDYKNSSNKVIGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGFGD PIGETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLKDTNVRTIYVETK SAEDVDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTL TTALGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVI SVCGGVIGIIIGVSGALIFGSVAGISSGITAGTIIFSFVFSLCIGVIFGIAPANKASK LRPIDALRSE" misc_feature 198213..199406 /locus_tag="lmo0195" /note="ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]; Region: SalY; COG0577" /db_xref="CDD:440342" regulatory 199420..199453 /regulatory_class="terminator" regulatory 200080..200085 /regulatory_class="ribosome_binding_site" gene 200094..200402 /locus_tag="lmo0196" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987023" CDS 200094..200402 /locus_tag="lmo0196" /experiment="EXISTENCE:[PMID:19448609]" /note="stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus" /codon_start=1 /transl_table=11 /product="regulatory protein SpoVG" /protein_id="NP_463727.1" /db_xref="GeneID:987023" /translation="MEITDVRLRRVETDGRMKAISSITIDGEFVIHDIRVIDGNEGLF VAMPSKRTPDGEFRDIAHPINSGTRAKIQEAVLAAYEVADEPAVNEESSADESIVEEN " misc_feature 200094..200375 /locus_tag="lmo0196" /note="septation regulator SpoVG; Region: PRK13259" /db_xref="CDD:237321" regulatory 200508..200513 /regulatory_class="ribosome_binding_site" gene 200522..200830 /locus_tag="lmo0197" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987024" CDS 200522..200830 /locus_tag="lmo0197" /experiment="EXISTENCE:[PMID:19448609]" /note="stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus" /codon_start=1 /transl_table=11 /product="regulatory protein SpoVG" /protein_id="NP_463728.1" /db_xref="GeneID:987024" /translation="MQVTDVRLRRVETDGRMRAIASITLDEEFVVHDIRVIDGNNGLF VAMPSKRGVDGEFRDIAHPINSDTRAKIQEVVLAEYERVGEEEATAVTEEESESVSAE " misc_feature 200522..200773 /locus_tag="lmo0197" /note="septation regulator SpoVG; Region: PRK13259" /db_xref="CDD:237321" regulatory 200845..200876 /regulatory_class="terminator" regulatory 201202..201207 /regulatory_class="ribosome_binding_site" gene 201217..202590 /gene="glmU" /locus_tag="lmo0198" /db_xref="GeneID:987026" CDS 201217..202590 /gene="glmU" /locus_tag="lmo0198" /experiment="EXISTENCE:[PMID:19448609]" /note="forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis" /codon_start=1 /transl_table=11 /product="bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase" /protein_id="NP_463729.1" /db_xref="GeneID:987026" /translation="MSKRYAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDQISTL NVDKVVTIVGHGAEKVQEHLAGKSEFVKQDEQLGTAHAVLQAKAELAGKDGVTLVVCG DTPLIEASTMEALLKYHHEKRAKATILTTVIEDPTGYGRIIRDDLGIVEKIVEHKDAT EKEQRISEINTGTYCFDNKALFEALENVSNDNVQGEYYLPDVIKILKDSDEVVAAYRM ESFEESLGVNDRIALAEASKLMQRRINENHMRNGVTLVNPESTYIDIDVKIGQDTVIE PGVMLRGKTVIGDDCVVTSGSEIVNSVIGERVHVRTSSIFESKVGDDVQIGPYAHLRP ESDIHDHVKIGNYVETKKAVVGEGTKLPHFIYMGDAEIGKNVNVGCGSIAVNYDGKNK AKTIIGDNVFVGCNSNLIAPVKVGDRAFIAAGSTITKDVPEDALGIARAKQDNKLGYA KHLNHSK" misc_feature 201223..202587 /gene="glmU" /locus_tag="lmo0198" /note="bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU; Region: glmU; PRK14354" /db_xref="CDD:184643" regulatory 202629..202634 /regulatory_class="ribosome_binding_site" gene 202641..203597 /gene="prs" /locus_tag="lmo0199" /db_xref="GeneID:987027" CDS 202641..203597 /gene="prs" /locus_tag="lmo0199" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP" /codon_start=1 /transl_table=11 /product="ribose-phosphate pyrophosphokinase" /protein_id="NP_463730.1" /db_xref="GeneID:987027" /translation="MSNEYFDPKLKIFSLNSNRELAEEIAKEVGIELGKSSVTHFSDG EIQINIEESIRGCHVYVIQSTSNPVNQNLMELLIMIDALKRASAATINIVMPYYGYAR QDRKARSREPITAKLVANLIETAGATRMITLDMHAPQIQGFFDIPIDHLNAVRLLSDY FSERHLGDDLVVVSPDHGGVTRARKMADRLKAPIAIIDKRRPRPNVAEVMNIVGNVEG KVCIIIDDIIDTAGTITLAAKALREAGATKVYACCSHPVLSGPAMKRIEESPIEKLVV TNSIALPEEKWIDKMEQLSVAALLGEAIVRVHENASVSSLFE" misc_feature 202668..203594 /gene="prs" /locus_tag="lmo0199" /note="ribose-phosphate diphosphokinase; Region: PRK01259" /db_xref="CDD:234929" regulatory complement(203596..203631) /regulatory_class="terminator" regulatory 203607..203642 /regulatory_class="terminator" gene complement(203640..204353) /gene="prfA" /locus_tag="lmo0200" /db_xref="GeneID:987031" CDS complement(203640..204353) /gene="prfA" /locus_tag="lmo0200" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="listeriolysin positive regulatory protein" /protein_id="NP_463731.1" /db_xref="GeneID:987031" /translation="MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDG ITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINEL KELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPD GIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYA PKLDEWFYLACPATWGKLN" misc_feature complement(203700..204302) /gene="prfA" /locus_tag="lmo0200" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" gene 204339..204468 /locus_tag="lmos05" /db_xref="GeneID:18245123" misc_RNA 204339..204468 /locus_tag="lmos05" /product="PrfA" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245123" regulatory complement(204361..204365) /regulatory_class="ribosome_binding_site" gene complement(204624..205577) /gene="plcA" /locus_tag="lmo0201" /db_xref="GeneID:987032" CDS complement(204624..205577) /gene="plcA" /locus_tag="lmo0201" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphatidylinositol-specific phospholipase c" /protein_id="NP_463732.1" /db_xref="GeneID:987032" /translation="MYKNYLQRTLVLLLCFILYFFTFPLGGKAYSLNNWNKPIKNSVT TKQWMSALPDTTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRY IDIRAKDNLNIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYR IQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSENHTKKPLVINSRKFGMQFG APNQVIQDDYNGPSVKTKFKEIVQTAYQASKADNKLFLNHISATSLTFTPRQYAAALN NKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN" misc_feature complement(204636..205427) /gene="plcA" /locus_tag="lmo0201" /note="Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C; Region: PI-PLCc; cd00137" /db_xref="CDD:176497" misc_feature complement(order(204804..204806,204981..204983, 205134..205136,205260..205262,205374..205379)) /gene="plcA" /locus_tag="lmo0201" /note="active site" /db_xref="CDD:176497" misc_feature complement(order(205233..205235,205377..205379)) /gene="plcA" /locus_tag="lmo0201" /note="catalytic site [active]" /db_xref="CDD:176497" regulatory complement(205586..205591) /regulatory_class="ribosome_binding_site" regulatory 205804..205809 /regulatory_class="ribosome_binding_site" gene 205819..207408 /gene="hly" /locus_tag="lmo0202" /db_xref="GeneID:987033" CDS 205819..207408 /gene="hly" /locus_tag="lmo0202" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="listeriolysin O precursor" /protein_id="NP_463733.1" /db_xref="GeneID:987033" /translation="MKKIMLVFITLILVSLPIAQQTEAKDASAFNKENSISSMAPPAS PPASPKTPIEKKHADEIDKYIQGLDYNKNNVLVYHGDAVTNVPPRKGYKDGNEYIVVE KKKKSINQNNADIQVVNAISSLTYPGALVKANSELVENQPDVLPVKRDSLTLSIDLPG MTNQDNKIVVKNATKSNVNNAVNTLVERWNEKYAQAYPNVSAKIDYDDEMAYSESQLI AKFGTAFKAVNNSLNVNFGAISEGKMQEEVISFKQIYYNVNVNEPTRPSRFFGKAVTK EQLQALGVNAENPPAYISSVAYGRQVYLKLSTNSHSTKVKAAFDAAVSGKSVSGDVEL TNIIKNSSFKAVIYGGSAKDEVQIIDGNLGDLRDILKKGATFNRETPGVPIAYTTNFL KDNELAVIKNNSEYIETTSKAYTDGKINIDHSGGYVAQFNISWDEVNYDPEGNEIVQH KNWSENNKSKLAHFTSSIYLPGNARNINVYAKECTGLAWEWWRTVIDDRNLPLVKNRN ISIWGTTLYPKYSNKVDNPIE" misc_feature 205996..207060 /gene="hly" /locus_tag="lmo0202" /note="Thiol-activated cytolysin; Region: Thiol_cytolysin; pfam01289" /db_xref="CDD:426182" misc_feature 207070..207375 /gene="hly" /locus_tag="lmo0202" /note="Thiol-activated cytolysin beta sandwich domain; Region: Thiol_cytolys_C; pfam17440" /db_xref="CDD:435915" gene 207589..207709 /locus_tag="lmos06" /db_xref="GeneID:18245124" misc_RNA 207589..207709 /locus_tag="lmos06" /product="rli51" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245124" regulatory 207727..207732 /regulatory_class="ribosome_binding_site" gene 207739..209271 /gene="mpl" /locus_tag="lmo0203" /db_xref="GeneID:987034" CDS 207739..209271 /gene="mpl" /locus_tag="lmo0203" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Zinc metalloproteinase precursor" /protein_id="NP_463734.1" /db_xref="GeneID:987034" /translation="MKSKLICIIMVIAFQAHFTMTVKADSVGEEKLQNNTQAKKTPAD LKALPDSCEAKDFYKNFKILDMTKDKLGVTHYTLALSSGGYLTDNDEIKVHVTPDNKI TFINGDLQQGQLRITNQIKITEKNAIEKAFEAIGQSEAHVKSYVGNPVKEKEIILNSR TKRLVYNIKLIFAEPEVASWIVQVDVETGAILKKQNMLSEVERADTHKDFQALGKGAN RLLQRPLHVMKINDLFYLVDRTHKGLIRTFDLKHNTDTSFGKVVSNKTNMFTDPEFSS AVDAHFYASEVYEYYKNVHQLESLDGKGGEIDSFVHYGLNCNNAFWDGQEILYGDGDK KNFKPFSCAKTIVGHELTHAVIQYSAGLEYEGQSGALNESFADVFGYFIAPNHWLIGE DVCVRGSRDGRIRSIKDPDKYNQAAHMKDYESLPLTEEGDWGGVHYNSGIPNKAAYNT ITKLGKEKTEQLYFRALKYYLTKKSQFTDAKKALQQAAKDLYGEDASKKVAEAWEAVG VN" misc_feature 207739..209268 /gene="mpl" /locus_tag="lmo0203" /note="Zn-dependent metalloprotease (Neutral protease B) [Posttranslational modification, protein turnover, chaperones]; Region: LasB; COG3227" /db_xref="CDD:442460" regulatory 209456..209461 /regulatory_class="ribosome_binding_site" gene 209470..211389 /gene="actA" /locus_tag="lmo0204" /db_xref="GeneID:987035" CDS 209470..211389 /gene="actA" /locus_tag="lmo0204" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="actin-assembly inducing protein precursor" /protein_id="NP_463735.1" /db_xref="GeneID:987035" /translation="MGLNRFMRAMMVVFITANCITINPDIIFAATDSEDSSLNTDEWE EEKTEEQPSEVNTGPRYETAREVSSRDIKELEKSNKVRNTNKADLIAMLKEKAEKGPN INNNNSEQTENAAINEEASGADRPAIQVERRHPGLPSDSAAEIKKRRKAIASSDSELE SLTYPDKPTKVNKKKVAKESVADASESDLDSSMQSADESSPQPLKANQQPFFPKVFKK IKDAGKWVRDKIDENPEVKKAIVDKSAGLIDQLLTKKKSEEVNASDFPPPPTDEELRL ALPETPMLLGFNAPATSEPSSFEFPPPPTDEELRLALPETPMLLGFNAPATSEPSSFE FPPPPTEDELEIIRETASSLDSSFTRGDLASLRNAINRHSQNFSDFPPIPTEEELNGR GGRPTSEEFSSLNSGDFTDDENSETTEEEIDRLADLRDRGTGKHSRNAGFLPLNPFAS SPVPSLSPKVSKISAPALISDITKKTPFKNPSQPLNVFNKKTTTKTVTKKPTPVKTAP KLAELPATKPQETVLRENKTPFIEKQAETNKQSINMPSLPVIQKEATESDKEEMKPQT EEKMVEESESANNANGKNRSAGIEEGKLIAKSAEDEKAKEEPGNHTTLILAMLAIGVF SLGAFIKIIQLRKNN" misc_feature 209488..211386 /gene="actA" /locus_tag="lmo0204" /note="ActA Protein; Region: ActA; pfam05058" /db_xref="CDD:282861" regulatory 211411..211416 /regulatory_class="ribosome_binding_site" gene 211425..212294 /gene="plcB" /locus_tag="lmo0205" /db_xref="GeneID:987036" CDS 211425..212294 /gene="plcB" /locus_tag="lmo0205" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phospholipase C" /protein_id="NP_463736.1" /db_xref="GeneID:987036" /translation="MKFKKVVLGMCLIASVLVFPVTIKANACCDEYLQTPAAPHDIDS KLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVNHMRANLMNELKKFDKQIAQGI YDADHKNPYYDTSTFLSHFYNPDRDNTYLPGFANAKITGAKYFNQSVTDYREGKFDTA FYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNYQATEDMVAKRF CSDDVKDWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTL AGFLEFWSKKTNE" misc_feature 211425..212291 /gene="plcB" /locus_tag="lmo0205" /note="Zinc dependent phospholipase C (alpha toxin); Region: Zn_dep_PLPC; smart00770" /db_xref="CDD:214813" regulatory 212316..212345 /regulatory_class="terminator" regulatory 212352..212357 /regulatory_class="ribosome_binding_site" gene 212366..212689 /locus_tag="lmo0206" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987037" CDS 212366..212689 /locus_tag="lmo0206" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0206" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463737.1" /db_xref="GeneID:987037" /translation="MYIKGRLIFFFVVLVIALCSVLILLIIKISVWKDEPFHLSDAKE IECLGSCEIKNTNQKIHFFSIKENLFEEKGDIAGILNEDEQKVADKSIFIVILDDEKG IANEE" misc_feature 212426..212686 /locus_tag="lmo0206" /note="Family of unknown function (DUF5502); Region: DUF5502; pfam17606" /db_xref="CDD:340321" regulatory 212811..212816 /regulatory_class="ribosome_binding_site" gene 212824..213285 /locus_tag="lmo0207" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987038" CDS 212824..213285 /locus_tag="lmo0207" /experiment="EXISTENCE:[PMID:19448609]" /note="Uncharacterized lipoprotein Lmo0207 precursor." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463738.1" /db_xref="GeneID:987038" /translation="MKMLKKGTAVLFVMIMAVMLVACGDKEETKTYTLSQNGVDSKLT YTYKGDKVTKQTAENTMSYASLGVASKEDAEKMLKATSDKFQGIDGLKEKIEYKDDKA IETLEVDYTKISSEDMNKIPGMSSNGDTSKGISMEESAKMLESQGYKEVSK" misc_feature 212824..213279 /locus_tag="lmo0207" /note="Uncharacterized lipoprotein YehR, DUF1307 family [Function unknown]; Region: YehR; COG4808" /db_xref="CDD:443836" regulatory complement(213290..213327) /regulatory_class="terminator" regulatory 213301..213338 /regulatory_class="terminator" gene complement(213336..213668) /locus_tag="lmo0208" /db_xref="GeneID:987041" CDS complement(213336..213668) /locus_tag="lmo0208" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463739.1" /db_xref="GeneID:987041" /translation="MIVTTSPNIEGKQIIEYKKIVFGEVITGVNFMKDIGAGLRNFFG GRSQGYEDELINAREEAIREMEQRAKDIGANAVIGVDIDYEVLGADNGMLMVTASGTA VVIEAQDY" misc_feature complement(213351..213668) /locus_tag="lmo0208" /note="putative heavy metal-binding protein; Region: PRK01119" /db_xref="CDD:179228" regulatory complement(213677..213682) /regulatory_class="ribosome_binding_site" gene complement(213735..214409) /locus_tag="lmo0209" /db_xref="GeneID:987042" CDS complement(213735..214409) /locus_tag="lmo0209" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0209" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463740.1" /db_xref="GeneID:987042" /translation="MITFDQLDTELQALENPNTIKIFRNHGCPDSLDLYGLKIGDLKK IIRREKLTKNHELAVKLIESNNSDLIYLGLLAINPNKITTEQIEKWNIAFRETWSQLT FGLASIVSKRDDALLFAKTWIESDYDLTKSMGWQIYSEHINNLPEAETLLQRAKETLQ TETNRTRYSMNGFIITCGIYKDDLHEKAMEAAKSVGKVHVNLGNTACKVPDAISYIEK ARNRTK" misc_feature complement(213762..214391) /locus_tag="lmo0209" /note="DNA alkylation repair enzyme; Region: DNA_alkylation; pfam08713" /db_xref="CDD:378033" misc_feature complement(order(213894..213896,213915..213920, 214014..214016,214116..214118,214344..214346)) /locus_tag="lmo0209" /note="active site" /db_xref="CDD:132880" regulatory complement(214417..214422) /regulatory_class="ribosome_binding_site" regulatory complement(214440..214468) /regulatory_class="terminator" gene complement(214486..215427) /gene="ldh" /locus_tag="lmo0210" /db_xref="GeneID:987043" CDS complement(214486..215427) /gene="ldh" /locus_tag="lmo0210" /EC_number="1.1.1.27" /experiment="EXISTENCE:[PMID:19448609]" /note="Converts (S)-lactate and NAD(+) to pyruvate and NADH" /codon_start=1 /transl_table=11 /product="L-lactate dehydrogenase" /protein_id="NP_463741.1" /db_xref="GeneID:987043" /translation="MKDHQKIILVGDGAVGSSYAFACVNLSIGQEFGIIDIDKDRTIG DAMDLSHAVPFSTPKKIYSANYSDCHDADLVVVTAGTAQKPGETRLDLVNRNIKIMKG IVDEVMASGFDGIFLIASNPVDILTYATWKFSGLPKERVIGSGTSLDTARFRMSIADY LKVDARNVHGYILGEHGDTEFPAWSHTTVGGLPITEWISEDEQGAMDTIFVSVRDAAY EIINKKGATFYGVAAALARITKAILNNENAILPLSVYLDGHYGMNDIYIGAPAVVNRQ GVRHIVEMNLNDKEKEQMKNSADTLKKVLDDAMKQID" misc_feature complement(214498..215427) /gene="ldh" /locus_tag="lmo0210" /note="L-lactate dehydrogenase; Reviewed; Region: ldh; PRK00066" /db_xref="CDD:178836" regulatory complement(215436..215441) /regulatory_class="ribosome_binding_site" regulatory 215707..215712 /regulatory_class="ribosome_binding_site" gene 215721..216344 /gene="ctc" /locus_tag="lmo0211" /db_xref="GeneID:987044" CDS 215721..216344 /gene="ctc" /locus_tag="lmo0211" /experiment="EXISTENCE:[PMID:19448609]" /note="the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L25" /protein_id="NP_463742.1" /db_xref="GeneID:987044" /translation="MATTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVD SLELIKAVRDNGRNAVFSVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVET DVRVVLVGDAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLP ENKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEPEAVHGKDEEPVE" misc_feature 215721..216299 /gene="ctc" /locus_tag="lmo0211" /note="50S ribosomal protein L25/general stress protein Ctc; Reviewed; Region: PRK05618" /db_xref="CDD:235534" regulatory 216362..216405 /regulatory_class="terminator" regulatory 216421..216426 /regulatory_class="ribosome_binding_site" gene 216434..217018 /locus_tag="lmo0212" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987045" CDS 216434..217018 /locus_tag="lmo0212" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0212" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463743.1" /db_xref="GeneID:987045" /translation="MLDKSVPHISVIMVNHDATNYPEFHLPAGYSFCFYKDGLEEDWC RLQLETGQVLSMDSIRARFETEFGNEKEKLTKRCIFVKAPNGEIIGTAMLWDGNTFGK IESRIHWVAVLDSHGGKGIAKALLSKILGLNKSKFVYLTTQTGSYQAIYLYRKFGFEK YVGKTPENWKTVNFQEEKETAWQIIENKIAEHQA" misc_feature 216659..216913 /locus_tag="lmo0212" /note="Acetyltransferase (GNAT) domain; Region: Acetyltransf_7; pfam13508" /db_xref="CDD:463905" regulatory 217112..217117 /regulatory_class="ribosome_binding_site" gene 217125..217685 /gene="pth" /locus_tag="lmo0213" /db_xref="GeneID:987046" CDS 217125..217685 /gene="pth" /locus_tag="lmo0213" /EC_number="3.1.1.29" /experiment="EXISTENCE:[PMID:19448609]" /note="Enables the recycling of peptidyl-tRNAs produced at termination of translation" /codon_start=1 /transl_table=11 /product="peptidyl-tRNA hydrolase" /protein_id="NP_463744.1" /db_xref="GeneID:987046" /translation="MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNG MTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRL RQKGSAGGHNGMKSIIQHVKTQEFNRIRVGVSRPLKGEVINYVLGDFPKAEQPDIIAA IQKSADAIEDFAQTPFIEVMNKYNQK" misc_feature 217125..217676 /gene="pth" /locus_tag="lmo0213" /note="Peptidyl-tRNA hydrolase [Translation, ribosomal structure and biogenesis]; Region: Pth; COG0193" /db_xref="CDD:439963" regulatory 217695..217723 /regulatory_class="terminator" regulatory 217785..217790 /regulatory_class="ribosome_binding_site" gene 217800..221339 /gene="mfd" /locus_tag="lmo0214" /db_xref="GeneID:987048" CDS 217800..221339 /gene="mfd" /locus_tag="lmo0214" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcription-repair coupling factor" /protein_id="NP_463745.1" /db_xref="GeneID:987048" /translation="MKGLQQLIYEQKDIRAVLNALDEKEKAQLVTGLTGSSRALFASV VEGASKRPVVFVTHNLYHAQKLYDDLLSLMDVDRLFLYPADELISSELSISSPELRGQ RVEALDFLLSGKPGIVIVPVAGLRKMLPPVSLWKHFNISIVEGEEIDPDVLRQKLVTM GYTMSGMVNTPGEFSVRGGIIDIYPITEEFPIRIELFDTEVDSLRFFDVETQRSTTRV EEFRLLPATEIILDQSYYPDIVKRLEKKMMLTLNELKEQEDKQALIENLEEDLEMLRS GVKPDMFFKYIGLAYPDPASLFDYLPKNTAILLDEFGRILETEESLEREEAEWQTETL SRMETVRDVQVSHSFKKLLEGNHSPKIYLSLFQKQMASMRVSKTTNIVYKQMQQFHGQ MNVLKTELESWHKNNYAVVILAPNLERAEKMQQTLTDYDMESTILKKESDVPKYGMVQ FVIGTFQNGFELPLAKVAIISETELFNKKIKKVKKRQKLSNAERIQSYSELKVGDYVV HVNHGIARYVGMETLDINGVHKDYLLLVYQGEDKLFIPVDQLDLVQKYVGAEGKSPRL NKLGGAEWKRVKKKVQASVQDIADDLIKLYAEREAEKGYAFSADDEMQREFEEAFPYQ ETEDQLRSISEIKKDMERPRPMDRLLVGDVGYGKTEVALRAAFKAIMDGKQVAFLVPT TILAQQHFETMKERFQGFPIEIGLLSRFRTKKQQTETLKGMKNGTVDVVVGTHRLLSK DVEYQDLGLLIVDEEQRFGVTHKEKIKQMRSKIDVLTLTATPIPRTLHMSMLGVRDLS VIETPPANRFPVQTYVAEQNNVLVREAIERELARDGQVYYLYNRVESITQKADEISAM VPDARVATAHGQMGESELESVILSFLEGEFDVLVTTTIIETGVDIPNVNTLFVQDADR MGLSQLYQLRGRVGRWNRIAYAYFMYQKDKILREEAEKRLSAIKEFTELGSGFKIAMR DLSIRGAGNILGAQQHGFIDSVGFDLYSQMLKEAIEAKKPKEEQKQIVPVEIDIQADA YIPEYYITDGRQKIEMYKRFRNIETLSELEDLQSDMIDRFGEYPEEVEYLFTMTELKV RALEVGIESVKQEQNKITMLFSESGTAGIRGDIVMQIIGEFGRMVGVGMEGTQLKITI NVQNKPLKEWLYQVKSLAEKLRGAMKEKASTEN" misc_feature 217875..221318 /gene="mfd" /locus_tag="lmo0214" /note="Transcription-repair coupling factor (superfamily II helicase) [Replication, recombination and repair, Transcription]; Region: Mfd; COG1197" /db_xref="CDD:440810" regulatory 221357..221362 /regulatory_class="ribosome_binding_site" gene 221370..222959 /locus_tag="lmo0215" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987049" CDS 221370..222959 /locus_tag="lmo0215" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463746.1" /db_xref="GeneID:987049" /translation="MSERSMKRLMKGAAWLTAASLISKILSAIYRVPFQNMVGDVGFY IFQQVYPIYGIAMTLALGGFPVVISKMLAEAEGDVRRQQIIMRAVSRMLRIVSIVIFA FLFLFANLIAIMMGDPALSELIRVISFVFLLMPQLAFMRGFFQGEGDMIPTAISQTVE QIIRVAIILIGAGLALHFNFDLYDAGSMAMSGAFFGGVSGIFILRHFYNKKVRLGEGI QPAVFTNKEEKVGIGRTFLRQSVAICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAK SLKGVYDRGQPILQLGLVISTGLALALVPMITAARVQGQQKELKRSVLLAIKITLILS GAETIGLIVIMRPLNQMLFQTPDGTFVLQLFMPAVFLSSLIIMLSSILQGFGKIAVPA VGVGIGLIVKWVTGGILIPRLATVGASVSTCVGLLVILLICYVSLKQTIRVPFVEKTM LFRLVAALVLMAVFPCLFEWLAPLDTRLGSAFQAIVSALVGGGIFLVFALRYKLLGPK DFVFLPFGSKLLALSKLVARK" misc_feature 221382..222932 /locus_tag="lmo0215" /note="Stage V sporulation protein SpoVB/SpoIIIF, required for spore cortex synthesis [Cell cycle control, cell division, chromosome partitioning]; Region: SpoVB; COG5841" /db_xref="CDD:444543" regulatory 222969..222974 /regulatory_class="ribosome_binding_site" gene 222983..223261 /locus_tag="lmo0216" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987050" CDS 222983..223261 /locus_tag="lmo0216" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463747.1" /db_xref="GeneID:987050" /translation="MATTMRLDKYLKVSRLIKRRTVAKEVAEKGRIAVNGVTAKPGTN VKSGDELVIRFGPKIVTAKIERLEENAKKEQATEMYTIIKEERTDESR" misc_feature 222983..>223252 /locus_tag="lmo0216" /note="Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain [Translation, ribosomal structure and biogenesis]; Region: HslR; COG1188" /db_xref="CDD:440801" regulatory 223269..223316 /regulatory_class="terminator" regulatory 223476..223481 /regulatory_class="ribosome_binding_site" gene 223490..223876 /locus_tag="lmo0217" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987052" CDS 223490..223876 /locus_tag="lmo0217" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DivIC protein" /protein_id="NP_463748.1" /db_xref="GeneID:987052" /translation="MKKAKSKVARIENRYIKDTATMKKTRSRRRIALFRRLAFMAIIF AVVGGLLTITYTKQVLTLKEKKEKQVQVDKKMVAMKDEQDSLNEQIKKLHNDDYIAKL ARSEYYLSKDGEIIFNIPEENSKQKE" misc_feature 223589..223867 /locus_tag="lmo0217" /note="Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning]; Region: FtsB; COG2919" /db_xref="CDD:442163" regulatory 224012..224017 /regulatory_class="ribosome_binding_site" gene 224027..224455 /locus_tag="lmo0218" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987053" CDS 224027..224455 /locus_tag="lmo0218" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463749.1" /db_xref="GeneID:987053" /translation="MSIEVGNKLQGKVTGITNFGAFVELEGGKTGLVHISEVADNYVK DINDILTVGDEVTVKVMNIGDDGKIGLSIRKAVDRPDRPEKSYDRKPKYNKKPAGNYV KPAESFEDIMSKFLKDSDERLTTIKRQTESKRGGRGAKRG" misc_feature 224027..224452 /locus_tag="lmo0218" /note="RNA-binding protein S1; Region: PRK08582" /db_xref="CDD:236305" regulatory 224482..224523 /regulatory_class="terminator" regulatory 224546..224551 /regulatory_class="ribosome_binding_site" gene 224562..226508 /locus_tag="lmo0219" /db_xref="GeneID:987055" CDS 224562..226508 /locus_tag="lmo0219" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463750.1" /db_xref="GeneID:987055" /translation="MDDTEKRVHKYIEKHDLIRSDDKLLVAVSGGPDSLALLHFLWNS NLVPKEAISVAHLNHQLRENAAKEQRVVETFCERQGIPFYIEEVDIKSRAQSLQKGLE ETARIVRYDFFEKVMAEKNINKLVLAHHADDQIETILMRLVRGSASIGWSGIQPKREL KGGQAIRPFLPITKAEIIDYAQKHELAYEIDESNTSQEYTRNRYRAQLLPFLKQENPA VYSHFERFSEETSEDFQFLEALASDLLKKNLIKNGKQTTLLLSSFKNEANPLQRRAIH LLLRYLYNEDASFITVNHIYQIIQMIQSDNPSSSIDLPNKLIANRAYDKLHFQFGERE APSEFYHQLELNDRIELDNKASIRLKLKSSVVQTNGLNGMLLDAEEITLPLIVRNRVN GDRMTMKGQAGSKKLKDIFIDAKIPRQERDKLPVITDYTGKILWVPGVKKSAYDREFS RSKKQYIIRYTRNIGGNESMHNDIQKVLISEDELQEKIRELGRELTTEYEGRNPLVVG VLKGATPFMTDLLKRVDTYLEMDFMDVSSYGNGTVSSGEVKIIKDLNASVEGRDVLVI EDIIDSGRTLSYLVDLIKYRKAKSVKLVTLLDKPAGRNVEIEADYVGFVVPNEFVVGY GLDYAERYRNLPYIGILKPEIYSE" misc_feature 224580..225284 /locus_tag="lmo0219" /note="tRNA(Ile)-lysidine synthase TilS/MesJ [Translation, ribosomal structure and biogenesis]; Region: TilS; COG0037" /db_xref="CDD:439807" misc_feature 225714..225893 /locus_tag="lmo0219" /note="TilS substrate C-terminal domain; Region: TilS_C; smart00977" /db_xref="CDD:198045" misc_feature 225969..226496 /locus_tag="lmo0219" /note="Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]; Region: HptA; COG0634" /db_xref="CDD:440399" regulatory 226526..226560 /regulatory_class="terminator" regulatory 226842..226847 /regulatory_class="ribosome_binding_site" gene 226854..228929 /gene="ftsH" /locus_tag="lmo0220" /db_xref="GeneID:987058" CDS 226854..228929 /gene="ftsH" /locus_tag="lmo0220" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division protein FtsH" /protein_id="NP_463751.1" /db_xref="GeneID:987058" /translation="MNRFFRNAIFYVIIFLVIIGIVASFNSNKEAAKDISYSEFVSKL EDGKVKSVEIQPDRSVYTINGEFKSSDKSSDDKKTGLGQSKTSSTAFTTYALNSDTSL GDLQKTLDKEDVKMNVVPAKQNSGWVTFLTSIVPFVIIFILFFFLMSQSQGGGGGKVM SFGKSKAKLYNDDKKKVRFTDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLL VGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCII FIDEIDAVGRQRGAGMGGGHDEREQTLNQLLVEMDGFGGNEGIIIIAATNRADVLDPA LLRPGRFDRQIMVDRPDVKGREAVLRVHARNKPLAKSVDLKAIAQRTPGFSGADLENL LNEAALVAARSDKKEIDMSDLDEASDRVIAGPAKKNRVISEKERRTVAYHEGGHVIVG MVLDEAEVVHKVTIVPRGQAGGYAVMLPKEDRFLMTKAELMDRITGLLGGRVAEEVTF GEVTTGASNDFERATELARRMVTEWGMSDKIGPLQFTSGNGQVFMGRDFGSDKGYSDK IAYEIDTEVQSLIRYCYDRAKTIITEHQEQHKLIAETLLKVETLDARQIRSLFDDGVM PPDIDTIDVEAEYPSEKDEEVAGKSFEEEREELKEEEKVEETQEEPKEVTSEDAPNIE QTPNDKKDE" misc_feature 226893..228716 /gene="ftsH" /locus_tag="lmo0220" /note="ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones]; Region: HflB; COG0465" /db_xref="CDD:440233" regulatory 228937..228969 /regulatory_class="terminator" regulatory 229027..229032 /regulatory_class="ribosome_binding_site" gene 229045..229824 /locus_tag="lmo0221" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987060" CDS 229045..229824 /locus_tag="lmo0221" /EC_number="2.7.1.33" /experiment="EXISTENCE:[PMID:19448609]" /note="Type III pantothenate kinase; type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP" /codon_start=1 /transl_table=11 /product="pantothenate kinase" /protein_id="NP_463752.1" /db_xref="GeneID:987060" /translation="MILVIDVGNTNCTVGVYEKQKLLKHWRMTTDRHRTSDELGMTVL NFFSYANLTPSDIQGIIISSVVPPIMHAMETMCVRYFNIRPLIVGPGIKTGLNLKVDN PREIGSDRIVNAVAASEEYGTPVIVVDFGTATTFCYIDESGVYQGGAIAPGIMISTEA LYNRAAKLPRVDIAESSQIIGKSTVSSMQAGIFYGFVGQCEGIIAEMKKQSNASPVVV ATGGLARMITEKSSAVDILDPFLTLKGLELLYRRNKPTTEK" misc_feature 229045..229815 /locus_tag="lmo0221" /note="type III pantothenate kinase; Region: PRK13318" /db_xref="CDD:237347" regulatory 229826..229831 /regulatory_class="ribosome_binding_site" gene 229840..230724 /gene="hslO" /locus_tag="lmo0222" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987062" CDS 229840..230724 /gene="hslO" /locus_tag="lmo0222" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="heat shock protein 33" /protein_id="NP_463753.1" /db_xref="GeneID:987062" /translation="MSDYLVKALAYDGMARVYAAVTTETIKEAQRRHDTWSVSSAALG RTMTGTLFLGAMQKEDQKITVKIEGDGPIGPIVADSNAQGQIRGYVTNPHVHFSELNE AGKLDVRRGVGTSGMLSVVKDLGFGENFTGQTPIVSGEIGEDFTYYLATSEQINSSVG VGVLVNPDDTIEAAGGFMLQLLPGATDEIIDEIEKNLMALPTVSRMIEAGETPESILA KLAGGEDKLQILEKIPVSFECNCSKERFGSAIISLGKEEIRSMIEEDHGAEAECHFCR NTYDFSEEELKTLYEEAK" misc_feature 229840..230721 /gene="hslO" /locus_tag="lmo0222" /note="Hsp33 family molecular chaperone HslO; Region: hslO; PRK00114" /db_xref="CDD:234643" regulatory 230825..230830 /regulatory_class="ribosome_binding_site" gene 230840..231766 /gene="cysK" /locus_tag="lmo0223" /db_xref="GeneID:987069" CDS 230840..231766 /gene="cysK" /locus_tag="lmo0223" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cysteine synthase" /protein_id="NP_463754.1" /db_xref="GeneID:987069" /translation="MTIANSITDLIGKTPIVKLNRLPEAGSADVYVKLEFQNPGGSVK DRIANAMIESAEKSGALKPGDTIIEPTSGNTGIGLAMVAAAKGYQAIFVMPETMSLER RKLLQAYGAKLVLTPGPDGMKGAIAKAEELAKENNYFVPQQFHNPANPAVHEETTGPE IVEAFGKDGLDAFIAGVGTGGTVTGVGHVLKKNYPDVKIYALEPEESPVLSGGSPSPH KIQGIGAGFVPDTLDTKVYDGILKVSSEDALETAREVAKKEGILVGISSGATIKAALD LAKELGAGKKVLAIVASNGERYLSTPLYNFED" misc_feature 230840..231742 /gene="cysK" /locus_tag="lmo0223" /note="Cysteine synthase [Amino acid transport and metabolism]; Region: CysK; COG0031" /db_xref="CDD:439802" regulatory 231775..231806 /regulatory_class="terminator" gene 231884..231994 /locus_tag="lmos07" /db_xref="GeneID:18245125" misc_RNA 231884..231994 /locus_tag="lmos07" /product="LhrC-1" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245125" gene 232086..232197 /locus_tag="lmos08" /db_xref="GeneID:18245113" misc_RNA 232086..232197 /locus_tag="lmos08" /product="LhrC-2" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245113" gene 232289..232400 /locus_tag="lmos09" /db_xref="GeneID:18245114" misc_RNA 232289..232400 /locus_tag="lmos09" /product="LhrC-3" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245114" gene 232492..232605 /locus_tag="lmos10" /db_xref="GeneID:18245115" misc_RNA 232492..232605 /locus_tag="lmos10" /product="LhrC-4" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245115" regulatory 232647..232652 /regulatory_class="ribosome_binding_site" gene 232662..233477 /gene="sul" /locus_tag="lmo0224" /db_xref="GeneID:987081" CDS 232662..233477 /gene="sul" /locus_tag="lmo0224" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dihydropteroate synthases" /protein_id="NP_463755.1" /db_xref="GeneID:987081" /translation="MKKWKRDHLGMVMGILNVTPDSFSDGGKYMQVEEAVARALQMAE DGAAIIDVGGISTRPGFSEVTPDEELARIIPVIKAVRTKLPDIWISVDSWRAEVAEQA ILAGADMINDQWGAKKEPKIAEVAAKYDVPICLMHNRENAQYDNFLEDVKKDLLESIA IAKAASVPDEHIILDPGFGFVKTPAQNLEVLRRIDEIVALGYEVLLGTSRKSTIGLVL GTTPGDRMEGTGATTVYGFSKGCTITRVHDVLPIARMVRMTDAITGKLDITNL" misc_feature 232692..233453 /gene="sul" /locus_tag="lmo0224" /note="Dihydropteroate synthase [Coenzyme transport and metabolism]; Region: FolP; COG0294" /db_xref="CDD:440063" regulatory 233477..233482 /regulatory_class="ribosome_binding_site" gene 233491..233865 /gene="folA" /locus_tag="lmo0225" /db_xref="GeneID:987089" CDS 233491..233865 /gene="folA" /locus_tag="lmo0225" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dihydroneopterin aldolase" /protein_id="NP_463756.1" /db_xref="GeneID:987089" /translation="MDKIYLNELVFYGYHGVLKEETKLGQTFRVSLILGLSTKKAGIS DSVEDTVSYADVYETVKEIVEGKPFKLIEALAEKIASEVLTGYPLLEEVTVKLIKPNP PIPGHYDSVAVEIERKRSDLNG" misc_feature 233491..233850 /gene="folA" /locus_tag="lmo0225" /note="Dihydroneopterin aldolase [Coenzyme transport and metabolism]; Region: FolB; COG1539" /db_xref="CDD:441148" regulatory 233844..233849 /regulatory_class="ribosome_binding_site" /gene="folA" /locus_tag="lmo0225" gene 233858..234337 /gene="folK" /locus_tag="lmo0226" /db_xref="GeneID:987097" CDS 233858..234337 /gene="folK" /locus_tag="lmo0226" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase" /protein_id="NP_463757.1" /db_xref="GeneID:987097" /translation="MAKAFLSIGTNIGERLENLNDALRGLAASNQINITNVSSVYETD AVGYEDQAAFLNIAVEIETDFPPIDLLDFCLALELELGRVRLFKWGPRLIDIDVLLYD DVKTDTEKLKIPHPYMKERAFVMIPLIEISPEKSNLVENPALLEEQGVRKIKNQVNW" misc_feature 233864..234259 /gene="folK" /locus_tag="lmo0226" /note="7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (folate biosynthesis) [Coenzyme transport and metabolism]; Region: FolK; COG0801" /db_xref="CDD:440564" regulatory 234398..234403 /regulatory_class="ribosome_binding_site" gene 234414..235409 /locus_tag="lmo0227" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987098" CDS 234414..235409 /locus_tag="lmo0227" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463758.1" /db_xref="GeneID:987098" /translation="MFKIGNVEIKNQVVVAPMAGISNSAFRLTVKEFGAGLVCCEMIS DKGIAYRNAKTLDMLYIDEKEKPLSLQIFGGEKETLVEAAKFVAENTTADIIDINMGC PVNKIIKCEAGAKWLLDPNKVYDMVAAVVDAVDKPVTVKMRIGWDEEHVFAIENALAA ERAGAAAVAMHGRTRVQMYEGSANWDVLRDVKRELKIPFMANGDVRTPEDAKRILEHT GADGVMIGRAALGNPWMIYRTVKFLETGELLLEPEPREKMQTAMLHLNRLVELKGENI AVREFRQHAAYYLKGARGSTRAKVAANQATKQSEMEAILNEFVLQYEEKALAKQD" misc_feature 234423..235367 /locus_tag="lmo0227" /note="putative TIM-barrel protein, nifR3 family; Region: nifR3_yhdG; TIGR00737" /db_xref="CDD:129820" regulatory 235417..235448 /regulatory_class="terminator" regulatory 235510..235515 /regulatory_class="ribosome_binding_site" gene 235524..237020 /gene="lysS" /locus_tag="lmo0228" /db_xref="GeneID:987100" CDS 235524..237020 /gene="lysS" /locus_tag="lmo0228" /experiment="EXISTENCE:[PMID:19448609]" /note="class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1" /codon_start=1 /transl_table=11 /product="lysyl-tRNA synthetase" /protein_id="NP_463759.1" /db_xref="GeneID:987100" /translation="MSNENHEELNDQLIVRREKVDTLREEGIDPFGEKFIRSISPEEI ETKFADKSKEELEEAAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGED AYAVFKLADLGDIIGIKGTIFRTNTGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQR YRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFI THHNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNPEFTMLESYA AYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVD FWNVTSDEEARELAKKHDVPVTEHMTYGHILNEFFETYVEEKLIQPTFVYGHPVEISP LAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKEREQGNDEAHGM DADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKHRD" misc_feature 235542..237017 /gene="lysS" /locus_tag="lmo0228" /note="lysyl-tRNA synthetase; Reviewed; Region: lysS; PRK00484" /db_xref="CDD:234778" misc_feature 236130..236144 /gene="lysS" /locus_tag="lmo0228" /note="motif 1; other site" /db_xref="CDD:238398" misc_feature order(236226..236228,236292..236294,236298..236300, 236316..236318,236328..236330,236745..236747, 236766..236768,236775..236777,236787..236789, 236943..236945) /gene="lysS" /locus_tag="lmo0228" /note="active site" /db_xref="CDD:238398" misc_feature 236289..236300 /gene="lysS" /locus_tag="lmo0228" /note="motif 2; other site" /db_xref="CDD:238398" misc_feature 236934..236945 /gene="lysS" /locus_tag="lmo0228" /note="motif 3; other site" /db_xref="CDD:238398" regulatory 237028..237065 /regulatory_class="terminator" gene 237466..239020 /locus_tag="lmor01" /db_xref="GeneID:987104" rRNA 237466..239020 /locus_tag="lmor01" /product="16S ribosomal RNA" /db_xref="GeneID:987104" gene 239265..242195 /locus_tag="lmor02" /db_xref="GeneID:987106" rRNA 239265..242195 /locus_tag="lmor02" /product="23S ribosomal RNA" /db_xref="GeneID:987106" gene 242276..242385 /locus_tag="lmor03" /db_xref="GeneID:987109" rRNA 242276..242385 /locus_tag="lmor03" /product="5S ribosomal RNA" /db_xref="GeneID:987109" gene 242399..242471 /locus_tag="lmot02" /db_xref="GeneID:3167623" tRNA 242399..242471 /locus_tag="lmot02" /product="tRNA-Val" /db_xref="GeneID:3167623" gene 242480..242555 /locus_tag="lmot03" /db_xref="GeneID:3167624" tRNA 242480..242555 /locus_tag="lmot03" /product="tRNA-Thr" /db_xref="GeneID:3167624" gene 242597..242669 /locus_tag="lmot04" /db_xref="GeneID:3167625" tRNA 242597..242669 /locus_tag="lmot04" /product="tRNA-Lys" /db_xref="GeneID:3167625" gene 242675..242756 /locus_tag="lmot05" /db_xref="GeneID:3167626" tRNA 242675..242756 /locus_tag="lmot05" /product="tRNA-Leu" /db_xref="GeneID:3167626" gene 242771..242842 /locus_tag="lmot06" /db_xref="GeneID:3167627" tRNA 242771..242842 /locus_tag="lmot06" /product="tRNA-Gly" /db_xref="GeneID:3167627" gene 242864..242949 /locus_tag="lmot07" /db_xref="GeneID:3167628" tRNA 242864..242949 /locus_tag="lmot07" /product="tRNA-Leu" /db_xref="GeneID:3167628" gene 242962..243035 /locus_tag="lmot08" /db_xref="GeneID:3167629" tRNA 242962..243035 /locus_tag="lmot08" /product="tRNA-Arg" /db_xref="GeneID:3167629" gene 243046..243119 /locus_tag="lmot09" /db_xref="GeneID:3167630" tRNA 243046..243119 /locus_tag="lmot09" /product="tRNA-Pro" /db_xref="GeneID:3167630" gene 243139..243214 /locus_tag="lmot10" /db_xref="GeneID:3167631" tRNA 243139..243214 /locus_tag="lmot10" /product="tRNA-Ala" /db_xref="GeneID:3167631" gene 243556..245041 /locus_tag="lmor04" /db_xref="GeneID:987145" rRNA 243556..245041 /locus_tag="lmor04" /product="16S ribosomal RNA" /db_xref="GeneID:987145" gene 245286..248216 /locus_tag="lmor05" /db_xref="GeneID:987180" rRNA 245286..248216 /locus_tag="lmor05" /product="23S ribosomal RNA" /db_xref="GeneID:987180" gene 248297..248406 /locus_tag="lmor06" /db_xref="GeneID:987183" rRNA 248297..248406 /locus_tag="lmor06" /product="5S ribosomal RNA" /db_xref="GeneID:987183" regulatory 248540..248545 /regulatory_class="ribosome_binding_site" gene 248555..249013 /locus_tag="lmo0229" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987186" CDS 248555..249013 /locus_tag="lmo0229" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="CtsR family transcriptional regulator" /protein_id="NP_463760.1" /db_xref="GeneID:987186" /translation="MKNISDIIEAYLKQVLESSEAVEIKRSEIADKFECVPSQINYVI NTRFTMERGYIVESKRGGGGYIRIIKVKMNDKLQLLEAIISMVHDKKVSQSFSEDVIL RLLEEEVITKKEARLMVAALDREVLILPLPDRDILRSRILEAMLVALKYD" misc_feature 248555..249007 /locus_tag="lmo0229" /note="Transcriptional regulator CtsR [Transcription]; Region: CtsR; COG4463" /db_xref="CDD:443560" regulatory 249013..249018 /regulatory_class="ribosome_binding_site" gene 249026..249544 /locus_tag="lmo0230" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987194" CDS 249026..249544 /locus_tag="lmo0230" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463761.1" /db_xref="GeneID:987194" /translation="MICQRCGENKAVIALQQLNELGKVESLYLCENCATDEALSSEKD LVKAMDTFSEVALDFLTLLQKEENTQKEVVCENCQLSFEEFLKTNRVGCPECYSAFEA QLVPIIGRVQNGYKKHIGKVPAEVERAEGVQNEISRLQEKLAKLVKNEEFEEAAVVRD EIKALKAGGEDK" misc_feature 249026..249541 /locus_tag="lmo0230" /note="Protein-arginine kinase activator protein McsA [Posttranslational modification, protein turnover, chaperones]; Region: McsA; COG3880" /db_xref="CDD:443088" regulatory 249526..249531 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0230" gene 249541..250563 /locus_tag="lmo0231" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987202" CDS 249541..250563 /locus_tag="lmo0231" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP:guanido phosphotransferase" /protein_id="NP_463762.1" /db_xref="GeneID:987202" /translation="MNVFEPRLSSWLENAGDDDDVVLSSRIRLARNLKDEQFPIYEQK EEIVDNIAEVFDDNFILIKMNQISLLQKALLVEKHLISPYMMNKSEYGAVLLNEEENV SIMLNEEDHLRIQCMTPGLRLFDALEAALQIDGYVEEKLSYAFDKEFGYLTSCVTNIG TGMRASVMVHLPGLVTTKRIKSVIEAIRSLGFVVRGIYGEGSMPASNIFQVSNQVTLG KTEAEIVEDLTQVMEQIIMQERVARTTLKQKFHIALEDRVFRSYGLLMNCRIISMKEA ADAISDIRFGVELGFFEHISRQKMNELVLFSQPAFLRREAGRDMDELEEKVIRAKVIR EILGDK" misc_feature 249541..250548 /locus_tag="lmo0231" /note="ATP:guanido phosphotransferase; Provisional; Region: PRK01059" /db_xref="CDD:234894" regulatory 250578..250583 /regulatory_class="ribosome_binding_site" gene 250592..253054 /gene="clpC" /locus_tag="lmo0232" /db_xref="GeneID:987203" CDS 250592..253054 /gene="clpC" /locus_tag="lmo0232" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="endopeptidase Clp ATP-binding chain C" /protein_id="NP_463763.1" /db_xref="GeneID:987203" /translation="MMFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEG IAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQYTPRAKKVIELSMDEARKLGHTY VGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGDATGAGRQTNTQATP TLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAE GLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILF IDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKDAALERRFQ PIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFLPDKAID VIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEFEKAASLRDKEQKLKK SLEETKANWQEKQGLDHSEVTEDIVAEVVASWTGIPVAKLAETETNKLLNMEKLLHER VIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDED SMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPD VFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVTDPLKDHK AMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAERDIHV KLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGVKDG KLEVRKKDAPKKKTTSKKVKAK" misc_feature 250592..252994 /gene="clpC" /locus_tag="lmo0232" /note="ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]; Region: ClpA; COG0542" /db_xref="CDD:440308" regulatory 253063..253100 /regulatory_class="terminator" regulatory 253185..253190 /regulatory_class="ribosome_binding_site" gene 253200..254573 /locus_tag="lmo0233" /db_xref="GeneID:987204" CDS 253200..254573 /locus_tag="lmo0233" /experiment="EXISTENCE:[PMID:19448609]" /note="Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents" /codon_start=1 /transl_table=11 /product="DNA repair protein RadA" /protein_id="NP_463764.1" /db_xref="GeneID:987204" /translation="MAKAKRTTKFVCQACGYESAKWMGKCPNCNEWNQMVEALEPSKK SRSAFNHTGEPSKATPITQIASETEKRVETNMPELNRVLGGGVVPGSMVLVGGDPGIG KSTLLLQVSAQLTLTNKKVLYISGEESIKQTKLRAERLQVSGDNLYVYAETNLEAVQE TIDFVKPDFVVIDSIQTVYHSDVTSAAGSVSQVRECTATLMRIAKMQNIAIFIVGHVT KEGAIAGPRLLEHMVDTVLYFEGERHHAYRILRAVKNRFGSTNEMGIFEMRDVGLVEV ANPSEVFLEERLEGASGSTVVASMEGTRPVLVEIQALVSPTMFGNAKRMATGIDYNKV SLIMAVLEKRVGLMLQNQDAYLKAAGGVKLDEPAVDLAVAVSVASSYRDKPTRSTDCF IGELGLTGEIRRVARIEQRVQEAAKLGFKRIFIPKNNEGNWKIPKDVQVVGVETIGEA LKKALPD" misc_feature 253200..254564 /locus_tag="lmo0233" /note="DNA repair protein RadA/Sms, contains AAA+ ATPase domain [Replication, recombination and repair]; Region: Sms; COG1066" /db_xref="CDD:440685" regulatory 254694..254699 /regulatory_class="ribosome_binding_site" gene 254707..255780 /locus_tag="lmo0234" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987212" CDS 254707..255780 /locus_tag="lmo0234" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463765.1" /db_xref="GeneID:987212" /translation="MLTWVIRVCFLILGGTTGVFSLPALWVKLGIGHILLINNPYTDA LIGALIFYLITFWAVKYVEAALNWLEEKLAKIAIATLVYGGLGLFVGLVIAFFASNAL SQTNIPLLNSVVPVILTLVLGYLGFRIGISRRNEFGNFVNNRNAKKRTPEEEKTEEKS KKTYKILDTSVIIDGRIADILTTGFLDGTVVIPLFVLAELQHIADSSDTLKRTRGRRG LDILNRIQKEDAIQVEMYEGDFEDTPEVDSKLVKLAKVMGGIVVTNDYNLNKVCEFQN VPVLNINDLANAVKPVVLPGEKMTVLMVKDGKEHNQGVAYLDDGTMIVVEDGRKFINE TIQVEVTSVLQTSAGRMIFAKPS" misc_feature 254710..255774 /locus_tag="lmo0234" /note="Uncharacterized conserved protein YacL, contains PIN and TRAM domains [General function prediction only]; Region: COG4956" /db_xref="CDD:443983" regulatory 255786..255791 /regulatory_class="ribosome_binding_site" gene 255800..256498 /gene="ispD" /locus_tag="lmo0235" /db_xref="GeneID:987220" CDS 255800..256498 /gene="ispD" /locus_tag="lmo0235" /EC_number="2.7.7.60" /experiment="EXISTENCE:[PMID:19448609]" /note="4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers" /codon_start=1 /transl_table=11 /product="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" /protein_id="NP_463766.1" /db_xref="GeneID:987220" /translation="MNYELVFLAAGQGKRMNAQKNKMWLELVGEPIFIHALRPFLADN RCSKVIVVCQEEERKHVKELMSQLNVAEHRIEIVKGGSERQYSVAAGLERCGTGRVVL VHDGARPFITLDIIDRLLIGVEQSKAAICAVKVKDTVKRVMNGVVQETVDRENLWQVQ TPQAFELPILRKAHQLARKEQFLGTDEASLVERIPCPVAIVQGSYYNIKLTTPEDMPL AKAILGELGGIAND" misc_feature 255800..256495 /gene="ispD" /locus_tag="lmo0235" /note="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional; Region: PRK13385" /db_xref="CDD:184017" misc_feature order(255821..255823,255827..255844,255863..255865, 256040..256051,256058..256060,256112..256120, 256424..256426) /gene="ispD" /locus_tag="lmo0235" /note="substrate binding site [active]" /db_xref="CDD:133009" misc_feature order(256121..256123,256178..256180,256202..256204, 256208..256210,256259..256276,256352..256357, 256361..256366,256373..256375,256388..256399, 256409..256414) /gene="ispD" /locus_tag="lmo0235" /note="dimer interface [active]" /db_xref="CDD:133009" regulatory 256477..256482 /regulatory_class="ribosome_binding_site" /gene="ispD" /locus_tag="lmo0235" gene 256491..256964 /gene="ispF" /locus_tag="lmo0236" /db_xref="GeneID:987228" CDS 256491..256964 /gene="ispF" /locus_tag="lmo0236" /EC_number="4.6.1.12" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate" /codon_start=1 /transl_table=11 /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase" /protein_id="NP_463767.1" /db_xref="GeneID:987228" /translation="MIRIGQGYDVHKLAYDRDLIIGGVKIPYEKGLLGHSDADVLLHA ITDAIIGAIGAGDIGHFFPDTDMVFKDADSAELLAEIWQKVEADGFRLGNLDATIIAE KPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK" misc_feature 256491..256961 /gene="ispF" /locus_tag="lmo0236" /note="2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Lipid transport and metabolism]; Region: IspF; COG0245" /db_xref="CDD:440015" regulatory 256969..256974 /regulatory_class="ribosome_binding_site" gene 256983..258458 /gene="gltX" /locus_tag="lmo0237" /db_xref="GeneID:987229" CDS 256983..258458 /gene="gltX" /locus_tag="lmo0237" /experiment="EXISTENCE:[PMID:19448609]" /note="Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA synthetase" /protein_id="NP_463768.1" /db_xref="GeneID:987229" /translation="MSETKRVRVRYAPSPTGFLHIGNARTALFNYLFARHNDGDFIIR IEDTDAKRNIADGEESQMTNLKWLGMDWDEGVDVPGKYGPYRQSERQSIYEPLIQELL DKDLAYKCYCTEEELDAEREKQKANGEMPRYSGKCRHLTKEQQAEKEAQGFKPSIRFK VPANETITFNDMVKDDVSFESNGIGDFVIAKKDGIPTYNFAVAVDDHLMEISHVLRGD DHISNTPKQILIYNAFGWEPPIFGHMTLIVNESRRKLSKRDGSIIQFIEQYRDLGYLP EALFNFIAMLGWSPEGEEEIFSKEEFIKMFDPKRLSKSPALFDNVKLTWVNNQYVKKL PLNDVVELSLPHLQKAGVVSAELNQAELDWVHKLVSLYHEQMSYGAEIVPLSEMFFAD AESITFDEEETAVLAEETVPTVISAFKKELEALEVLEAAEVKAAIKRVQKETGVKGKG LFMPIRIVTTGEMHGPELPLAIEVLGREKVLNRLDTWLKNN" misc_feature 256989..258437 /gene="gltX" /locus_tag="lmo0237" /note="Glutamyl- or glutaminyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: GlnS; COG0008" /db_xref="CDD:439779" regulatory 258471..258505 /regulatory_class="terminator" gene 258548..258760 /locus_tag="lmos11" /db_xref="GeneID:18245180" misc_RNA 258548..258760 /locus_tag="lmos11" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245180" regulatory 258843..258848 /regulatory_class="ribosome_binding_site" gene 258856..259470 /gene="cysE" /locus_tag="lmo0238" /db_xref="GeneID:987230" CDS 258856..259470 /gene="cysE" /locus_tag="lmo0238" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="serine O-acetyltransferase" /protein_id="NP_463769.1" /db_xref="GeneID:987230" /translation="MPTRLKEDIATIIKNDPATKSFFDAFLTNPGLHALWWHRVANFF YRHKMVLFGKVLSQNARFWTNIEIHPGATIGRRLFIDHGAGIVIGETAEIGDDVTIFH GVTLGGTGKDCGKRHPTVGDGALVSAGAKVLGPVEIGAGARIGAGAVVLKDVPPGATV VGIPAKVVRLNGRTVGHAVPKMDELTLRIAELENIVEKLLKEKE" misc_feature 258856..259371 /gene="cysE" /locus_tag="lmo0238" /note="Serine acetyltransferase [Amino acid transport and metabolism]; Region: CysE; COG1045" /db_xref="CDD:440667" regulatory 259463..259468 /regulatory_class="ribosome_binding_site" /gene="cysE" /locus_tag="lmo0238" gene 259477..260892 /gene="cysS" /locus_tag="lmo0239" /db_xref="GeneID:987258" CDS 259477..260892 /gene="cysS" /locus_tag="lmo0239" /EC_number="6.1.1.16" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA" /codon_start=1 /transl_table=11 /product="cysteinyl-tRNA synthetase" /protein_id="NP_463770.1" /db_xref="GeneID:987258" /translation="MSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARP IIVFDTVRRYFTYRGYDVKFVSNFTDVDDKLIRAANELKLTVPEVADRFIGAYFDDVD QLNVAKASVNPRVTENMDEIIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQEL SELQHGARVEYNERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLG DTIDIHAGGQDLVFPHHEDEIAQSEAATGKTFANYWMHNAFLNIDGEKMSKSLGNFIT LHDVLKDNDPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDD GEYVEEAHEDEWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSI NVLREFLSMMRLFAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRD ILKEKNIILEDTAQGTRFRRG" misc_feature 259480..260889 /gene="cysS" /locus_tag="lmo0239" /note="Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: CysS; COG0215" /db_xref="CDD:439985" regulatory 260883..260889 /regulatory_class="ribosome_binding_site" /gene="cysS" /locus_tag="lmo0239" gene 260896..261306 /locus_tag="lmo0240" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987262" CDS 260896..261306 /locus_tag="lmo0240" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463771.1" /db_xref="GeneID:987262" /translation="MAEVKEYKQLNGLALAYMGDAVYEKFIREYLLAAGKTKPNQLHK TATKFVSAKGQAVALKAMIAEGFLTEEEDRIAKRGRNAKSYTVPKNTDPGTYSMSTSF EAVLGYLYLAGEMERLQEWMEKALEIVEKGVETN" misc_feature 260902..261297 /locus_tag="lmo0240" /note="23S rRNA maturation mini-RNase III [Translation, ribosomal structure and biogenesis]; Region: MrnC; COG1939" /db_xref="CDD:441542" regulatory 261288..261293 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0240" gene 261306..262061 /locus_tag="lmo0241" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987267" CDS 261306..262061 /locus_tag="lmo0241" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463772.1" /db_xref="GeneID:987267" /translation="MEQENEQEWIGGRNPVLEVLRSDRDIHKIYVQEGSQKGVLKQVL TLAKERKIQVQFVPKQKIEKVVSGAHQGVAAQVAAYQYAELDDLFAAAEAKDEMPFFI ILDELEDPHNLGSIMRTADSVGAHGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVTN MVRTMEELQKRGLWIFGTDAKGSSDYRTMDVDMPLAIVIGSEGFGMSRLVREKCDFLV HLPMRGKVTSLNASVAASLLLYEVYRKRFPLEK" misc_feature 261315..262043 /locus_tag="lmo0241" /note="tRNA G18 (ribose-2'-O)-methylase SpoU [Translation, ribosomal structure and biogenesis]; Region: SpoU; COG0566" /db_xref="CDD:440332" regulatory 262051..262056 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0241" gene 262064..262576 /locus_tag="lmo0242" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987272" CDS 262064..262576 /locus_tag="lmo0242" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463773.1" /db_xref="GeneID:987272" /translation="MEQILLVDGYNVIGAWPELSYLKDRDLEAARDKLVEWMAEYQSY TGYRVVVVFDAQFVRGVKRKSKKYQVEVVFTHEDETADEYIEQKAIEWKNVRTQIMVA TSDYTEQWAIFGQGALRISSRELLFEIQEMSKQIGKKIKRIQEEMPKSNLNLDSDVIS QLEKWRRGEE" misc_feature 262070..262570 /locus_tag="lmo0242" /note="EndoRNase involved in mRNA decay, NYN (Nedd4-BP1/Rae1/YacP nuclease) family, contains PIN domain [Translation, ribosomal structure and biogenesis]; Region: Rae1; COG3688" /db_xref="CDD:442904" regulatory 262640..262645 /regulatory_class="ribosome_binding_site" gene 262657..263262 /gene="sigH" /locus_tag="lmo0243" /db_xref="GeneID:987276" CDS 262657..263262 /gene="sigH" /locus_tag="lmo0243" /EC_number="2.7.7.6" /experiment="EXISTENCE:[PMID:19448609]" /note="DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates" /codon_start=1 /transl_table=11 /product="RNA polymerase factor sigma-70" /protein_id="NP_463774.1" /db_xref="GeneID:987276" /translation="MDNSVNQEELAMLELARSGDTEALEYFFSKYQSVIYWKSTQYFL QGAERDDLIQEAMIGLFKAIRDYDKTKEASFRSFAEMCINRQLLSAVKRASRQKNIPL NNSVSLDTPMAEDDVDWTLLDVISEKAAETPEDFLIKNEDLTHVARQLEQVTSEFEKE VLKQYLEGKSYQEMALFFNKKEKAIDNALQRVKKKMMKQLE" misc_feature 262657..263259 /gene="sigH" /locus_tag="lmo0243" /note="RNA polymerase sporulation sigma factor SigH; Region: PRK08295" /db_xref="CDD:181361" gene 263366..263515 /gene="rpmG" /locus_tag="lmo0244" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987282" CDS 263366..263515 /gene="rpmG" /locus_tag="lmo0244" /experiment="EXISTENCE:[PMID:19448609]" /note="in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L33 type II" /protein_id="NP_463775.1" /db_xref="GeneID:987282" /translation="MKKKTSLACSECGSRNYTVNVSGTQKETRLEVKKFCRHCNKHTL HRETK" misc_feature 263366..263512 /gene="rpmG" /locus_tag="lmo0244" /note="50S ribosomal protein L33; Validated; Region: rpmG; PRK00504" /db_xref="CDD:234783" regulatory 263522..263527 /regulatory_class="ribosome_binding_site" gene 263535..263714 /gene="secE" /locus_tag="lmo0245" /db_xref="GeneID:987283" CDS 263535..263714 /gene="secE" /locus_tag="lmo0245" /experiment="EXISTENCE:[PMID:19448609]" /note="forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecE" /protein_id="NP_463776.1" /db_xref="GeneID:987283" /translation="MSAIAKFFRNVSSEMHKVTWPTRKELLTYTVTVVITVVLFALFF MLIDFGIEQIIKLIV" misc_feature 263535..263711 /gene="secE" /locus_tag="lmo0245" /note="Preprotein translocase subunit SecE [Intracellular trafficking, secretion, and vesicular transport]; Region: SecE; COG0690" /db_xref="CDD:440454" regulatory 263762..263791 /regulatory_class="terminator" gene 263844..264377 /gene="nusG" /locus_tag="lmo0246" /db_xref="GeneID:987288" CDS 263844..264377 /gene="nusG" /locus_tag="lmo0246" /experiment="EXISTENCE:[PMID:19448609]" /note="Modulates Rho-dependent transcription termination" /codon_start=1 /transl_table=11 /product="transcription antitermination protein NusG" /protein_id="NP_463777.1" /db_xref="GeneID:987288" /translation="MEKNWYVVHTYSGYENKVKANLEKRVESMGMSDKIFRVIVPEEE ETEVKNGKTKTIKRKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTPLL PEEADRILKSMGMVEKRAEADFEIGETVMVKEGPFADFSGKVDEMDNDKGKAKVMVNM FGRETPVEVDFNQIEKL" misc_feature 263844..264374 /gene="nusG" /locus_tag="lmo0246" /note="Transcription termination/antitermination protein NusG [Transcription]; Region: NusG; COG0250" /db_xref="CDD:440020" regulatory 264384..264421 /regulatory_class="terminator" regulatory 264419..264424 /regulatory_class="ribosome_binding_site" gene 264432..264902 /locus_tag="lmo0247" /db_xref="GeneID:987292" CDS 264432..264902 /locus_tag="lmo0247" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0247" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463778.1" /db_xref="GeneID:987292" /translation="MDKAKQIYLEFKREADFLELDFPLFLGDGPGFGELCMDYSEQDG YMLYGYEHGKRNSEFKTTDFDEFKYEVFLHICWYMGMEFELRHRKEDIERDDNILETD TRKIAFEKTLQLLKMVNPAWIDKAAIGYSNYLNLWRKNKNVYFDKEAMQFKVNL" misc_feature 264555..264827 /locus_tag="lmo0247" /note="Immunity protein 63; Region: Imm63; pfam15599" /db_xref="CDD:434805" regulatory 265015..265020 /regulatory_class="ribosome_binding_site" gene 265029..265454 /gene="rplK" /locus_tag="lmo0248" /db_xref="GeneID:987298" CDS 265029..265454 /gene="rplK" /locus_tag="lmo0248" /experiment="EXISTENCE:[PMID:19448609]" /note="binds directly to 23S ribosomal RNA" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L11" /protein_id="NP_463779.1" /db_xref="GeneID:987298" /translation="MAKKVIKEVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNA RTADQAGLIIPVVITVFEDRSFTFITKTPPAAVLLKKAAKVEKGSGEPNKTKVASVTR AQVQEIAETKMPDLNAANVESAMLMVEGTARSMGITIQD" misc_feature 265029..265451 /gene="rplK" /locus_tag="lmo0248" /note="50S ribosomal protein L11; Validated; Region: rplK; PRK00140" /db_xref="CDD:234661" misc_feature order(265056..265058,265116..265118,265248..265256, 265266..265268,265287..265289,265362..265364, 265377..265385,265395..265397,265404..265409, 265416..265421,265425..265433) /gene="rplK" /locus_tag="lmo0248" /note="23S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:100101" misc_feature order(265056..265058,265197..265199,265203..265214, 265224..265226,265230..265235,265365..265370, 265377..265382) /gene="rplK" /locus_tag="lmo0248" /note="L7/L12 interface [polypeptide binding]; other site" /db_xref="CDD:100101" misc_feature order(265104..265106,265116..265118) /gene="rplK" /locus_tag="lmo0248" /note="putative thiostrepton binding site [active]" /db_xref="CDD:100101" misc_feature order(265305..265307,265314..265316) /gene="rplK" /locus_tag="lmo0248" /note="L25 interface [polypeptide binding]; other site" /db_xref="CDD:100101" regulatory 265481..265486 /regulatory_class="ribosome_binding_site" gene 265494..266183 /gene="rplA" /locus_tag="lmo0249" /db_xref="GeneID:987301" CDS 265494..266183 /gene="rplA" /locus_tag="lmo0249" /experiment="EXISTENCE:[PMID:19448609]" /note="in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L1" /protein_id="NP_463780.1" /db_xref="GeneID:987301" /translation="MAKKGKKYQDALKQIDANKVYTAEEAVELAKKIDFAKFDATVEV AFRLGVDPKKADQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYVGESEFVE KINQGWFDFDVIVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTMDVTKAVNEIKAGK VEYRVDKAGNVHAAIGKVSFDAAKLVENFRTVNDVLQKAKPAAAKGTYVKNLSVTTTF GPGIKVDPASL" misc_feature 265494..266171 /gene="rplA" /locus_tag="lmo0249" /note="Ribosomal protein L1 [Translation, ribosomal structure and biogenesis]; Region: RplA; COG0081" /db_xref="CDD:439851" gene 266232..266375 /locus_tag="lmos12" /db_xref="GeneID:18245181" misc_RNA 266232..266375 /locus_tag="lmos12" /product="L10" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245181" regulatory 266236..266271 /regulatory_class="terminator" /locus_tag="lmos12" regulatory 266418..266423 /regulatory_class="ribosome_binding_site" gene 266431..266931 /gene="rplJ" /locus_tag="lmo0250" /db_xref="GeneID:987306" CDS 266431..266931 /gene="rplJ" /locus_tag="lmo0250" /experiment="EXISTENCE:[PMID:19448609]" /note="binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L10" /protein_id="NP_463781.1" /db_xref="GeneID:987306" /translation="MSKVLEAKQSAVEEIKTKLSASASTVIVDYRGLNVGEITDLRKQ LRDAGIEFKVYKNSLTRRAVEANGYEGLEGALTGPNAIAFSNEDVVAPAKILNDFAKD HEALEIKAGVIEGKVASLEEIKALATLPSREGLLSMLCNVLQAPVRGLAIATKAVADQ KEGQEA" misc_feature 266443..266919 /gene="rplJ" /locus_tag="lmo0250" /note="50S ribosomal protein L10; Reviewed; Region: rplJ; PRK00099" /db_xref="CDD:234632" misc_feature order(266452..266457,266464..266466,266596..266607, 266614..266616) /gene="rplJ" /locus_tag="lmo0250" /note="23S rRNA interface [nucleotide binding]; other site" /db_xref="CDD:240223" misc_feature order(266698..266700,266767..266769,266776..266778, 266824..266826,266833..266838,266845..266850, 266854..266871,266875..266883,266890..266895, 266899..266904,266908..266910) /gene="rplJ" /locus_tag="lmo0250" /note="Interface with L7/L12 ribosomal proteins [polypeptide binding]; other site" /db_xref="CDD:240223" regulatory 266995..267000 /regulatory_class="ribosome_binding_site" gene 267010..267372 /gene="rplL" /locus_tag="lmo0251" /db_xref="GeneID:987315" CDS 267010..267372 /gene="rplL" /locus_tag="lmo0251" /experiment="EXISTENCE:[PMID:19448609]" /note="present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L7/L12" /protein_id="NP_463782.1" /db_xref="GeneID:987315" /translation="MALNIEEIIASVKEASVLELNDLVKAIEEEFGVTAAAPVAVAAA GGAAAEQTEFTVELASAGDSKIKVIKVVREITGLGLKEAKELVDNAPKALKEGIAKDE AEEIKAKLEEVGANVEVK" misc_feature 267010..267369 /gene="rplL" /locus_tag="lmo0251" /note="Ribosomal protein L7/L12 [Translation, ribosomal structure and biogenesis]; Region: RplL; COG0222" /db_xref="CDD:439992" misc_feature order(267016..267018,267055..267063,267070..267075, 267082..267084,267091..267093,267127..267135, 267163..267168,267229..267231,267235..267240, 267244..267246,267250..267255,267295..267300, 267304..267306,267313..267315) /gene="rplL" /locus_tag="lmo0251" /note="core dimer interface [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature order(267025..267027,267034..267036,267046..267048, 267085..267087,267100..267102) /gene="rplL" /locus_tag="lmo0251" /note="peripheral dimer interface [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature order(267067..267069,267076..267081,267091..267093, 267100..267102) /gene="rplL" /locus_tag="lmo0251" /note="L10 interface [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature order(267202..267207,267214..267219,267226..267228, 267247..267252,267259..267261) /gene="rplL" /locus_tag="lmo0251" /note="L11 interface [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature order(267205..267207,267217..267219,267226..267228, 267247..267252,267259..267261) /gene="rplL" /locus_tag="lmo0251" /note="putative EF-Tu interaction site [polypeptide binding]; other site" /db_xref="CDD:100102" misc_feature order(267205..267207,267214..267219,267226..267228) /gene="rplL" /locus_tag="lmo0251" /note="putative EF-G interaction site [polypeptide binding]; other site" /db_xref="CDD:100102" regulatory 267384..267421 /regulatory_class="terminator" regulatory 267518..267522 /regulatory_class="ribosome_binding_site" gene 267530..267916 /locus_tag="lmo0252" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987321" CDS 267530..267916 /locus_tag="lmo0252" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="penicilinase repressor" /protein_id="NP_463783.1" /db_xref="GeneID:987321" /translation="MAIKSISKSELEVMKIIWDFGRAVQYADVAGKLEEKNYSWKKNT VLTFLTRLVEKNLLSVKKVGRKNEYYALVSENEYLERQTETFVEEIYEGDVKGLITNL VQNDLISPDELEDLQQFWKRMKSPNE" misc_feature 267545..267895 /locus_tag="lmo0252" /note="Penicillinase repressor; Region: Penicillinase_R; pfam03965" /db_xref="CDD:427620" regulatory 267893..267898 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0252" gene 267909..268949 /locus_tag="lmo0253" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987325" CDS 267909..268949 /locus_tag="lmo0253" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="penicillinase antirepressor" /protein_id="NP_463784.1" /db_xref="GeneID:987325" /translation="MNELLKIFLSMALTSVILIPLVWILRRIFNRYLSKGKIYYSWLI VFFFLTIPFAYIFFSFTKDNAFMWRNKTEFDGVTSIVMDQSGIVLQHDFKTVFWMTVL DYIWVAWLVIFLLTFIYRIASYRNFKKYVFSGARRVDDLEQLDILAETIEELNIKRPV ELMINPLISSPIFLGLKKNVIVIPDETFSNVELHYIFKHELVHCKRKDMYYVWMVQFF TCIYWFNPLMYLMNKRIQMDRELACDEAVLATLSKSKYIGYGDTLLSSLAKSGNYKES YVAVSLHENTKALKERLMFIANYKAQNKKHNILFSISMIVLCIVGVLFSAFQADVFTL EKKKGITIERRK" misc_feature 267924..268796 /locus_tag="lmo0253" /note="BlaR1 peptidase M56; Region: Peptidase_M56; pfam05569" /db_xref="CDD:428523" regulatory 268961..268994 /regulatory_class="terminator" regulatory 269053..269058 /regulatory_class="ribosome_binding_site" gene 269067..269729 /locus_tag="lmo0254" /db_xref="GeneID:987329" CDS 269067..269729 /locus_tag="lmo0254" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0254" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463785.1" /db_xref="GeneID:987329" /translation="MFGRKKVSIPEEYQRFNQFSADKERLLCIGAFTTECKHKVETKL DGSNKMLKLYYPKNQAAKVMKYWLPMFGINDGYSAVEVITNWIQANDYSGMIAANTTN KVIRIVTKASQKEGLDETSLVAAANKVKTYGAFDLDRLGYIVRVCYSLDLINEEQAWD FFEELWGAATMHFDDWDEYCVSYLNGEEGLDTNWYSDGVKAYVALRKDAASLLNKYQL KN" misc_feature <269466..269699 /locus_tag="lmo0254" /note="Protein of unknown function (DUF1266); Region: DUF1266; cl14673" /db_xref="CDD:472703" regulatory 269738..269743 /regulatory_class="ribosome_binding_site" gene 269754..270257 /locus_tag="lmo0255" /db_xref="GeneID:987335" CDS 269754..270257 /locus_tag="lmo0255" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463786.1" /db_xref="GeneID:987335" /translation="MKKFLSILSILVLALLVTACGSDSSDKKSAKKEEKMETVTYIAD INGAKLEATFSHVGDNLRKVDQKMVYPLTALGLESGANLDDATKKQLEEQVASQYSAY KESKGASLETKFTDEALELTMSVDLYKADKDSVASLLGGTTDPKNVSLKETVKQFEAQ GFKKKES" misc_feature 269754..270251 /locus_tag="lmo0255" /note="Uncharacterized lipoprotein YehR, DUF1307 family [Function unknown]; Region: YehR; COG4808" /db_xref="CDD:443836" regulatory 270357..270362 /regulatory_class="ribosome_binding_site" gene 270372..270977 /locus_tag="lmo0256" /db_xref="GeneID:987337" CDS 270372..270977 /locus_tag="lmo0256" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463787.1" /db_xref="GeneID:987337" /translation="MTNNHYYTNDETIKHNRKTWQVMLKGFNMSFTSDNGVFSKNTVD FGSKLLIESFELETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKEN AEINKITNTHIYESSVYDNVTANDYQAIISNPPIRAGKKIVHAILEGAYDHLQETGEL WIVIQKKQGGPSAEKKMEEVFGNVETVAKDKGYFIFKSVKN" misc_feature 270420..270971 /locus_tag="lmo0256" /note="16S rRNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]; Region: RsmC; COG2813" /db_xref="CDD:442062" gene 271029..271186 /locus_tag="lmos13" /db_xref="GeneID:18245182" misc_RNA 271029..271186 /locus_tag="lmos13" /product="rli24" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245182" regulatory 271311..271316 /regulatory_class="ribosome_binding_site" gene 271324..272502 /locus_tag="lmo0257" /db_xref="GeneID:987339" CDS 271324..272502 /locus_tag="lmo0257" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463788.1" /db_xref="GeneID:987339" /translation="MLTLKGKYNEAKVFTDNVDDNTIGQIITLCNQPFAKDSKIRIMP DTHGGKGCVIGTTMTIQDKIVPNLVGVDIGCGLYVVKLKPGKLKMDFDKLDKVIRERV PSGSKTHDKPVDEFDLEGIVAPIHHGWVARSIGTLGGGNHFIEVNQGSDGIYLVIHSG SRVLGKEIAEYHQEVAYKRLDILRKELKLDATAAKKRGNLEMANNLNGEREQVKLDYD LSYVTGVDLKNYLNDMEIAQKFAARNRYVMAQIILKAMKWDKAVVSAFDCVHNYIDIE HNMLRKGATSAQLGEQIIVPLNMREGSILATGKGNADWNYSAPHGAGRMLSRSKAKAQ ISLESYQAAMKDVWTTSVSKKTIDEAPKAYKSAKQLLADVEDTMEIQEIIKPLYNFKA " misc_feature 271354..272496 /locus_tag="lmo0257" /note="RNA-splicing ligase RtcB, repairs tRNA damage [Translation, ribosomal structure and biogenesis]; Region: RtcB; COG1690" /db_xref="CDD:441296" regulatory 272508..272547 /regulatory_class="terminator" regulatory 272990..272995 /regulatory_class="ribosome_binding_site" gene 273003..276557 /gene="rpoB" /locus_tag="lmo0258" /db_xref="GeneID:987342" CDS 273003..276557 /gene="rpoB" /locus_tag="lmo0258" /EC_number="2.7.7.6" /experiment="EXISTENCE:[PMID:19448609]" /note="DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit beta" /protein_id="NP_463789.1" /db_xref="GeneID:987342" /translation="MSGHSGHDVKYGRHRTRRSFARISEVLELPNLIEIQTASYQWFL DEGLREMFRDISPIEDFAGNLSLEFIDYDLGEPKYSVEESKNRDANYAAPLRVKLRLI NKETGEVKDQEVFMGDFPLMTEMGTFIINGAERVIVSQLVRSPGVYFNGKLDKNGKKG FGSTVIPNRGAWLEYETDAKDVVHVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDND YLRNTLEKDNTDNAEKALLEIYERLRPGEPPTVDNARSLLVSRFFDPKRYDLASVGRY KINKKLHLKNRLFNQTLAETLVDPETGEIIASKGDILDRRNLDQIIPNLENGVGFRTL RPTDGVMEDSVLVQSIKIYAPNDEEKEINIIGNAYIEENVKHITPSDIISSISYFFNL LHGVGDTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDMTTITPQQLI NIRPVVASIKEFFGSSQLSQFMDQTNPLGELTHKRRLSALGPGGLTRERAGYEVRDVH YSHYGRMCPIETPEGPNIGLINSLSSFAKVNKFGFIETPYRRVDPETNRVTDKIDYLT ADEEDNYVVAQANSKLDEQGTFTEEEVMARFRSENLAVEKERIDYMDVSPKQVVSVAT ACIPFLENDDSNRALMGANMQRQAVPLMHPEAPFVGTGMEHVSAKDSGAAVTAKHDGI VEHVEAREIWVRRVSLVDGKEVTGGIDKYTLRKFVRSNQGTCYNQRPNVAEGDRVVKG EILGNGPSMDSGELALGRNVLVAFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEFES EARDTKLGPEEMTRDIPNVGEDALRDLDERGIIRVGAEVKDNDLLVGKVTPKGVTELT AEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKIFTREAGDELPPGVNQLVRVYI VQKRKIHEGDKMAGRHGNKGVISRILPEEDMPFMPDGTPVDIMLNPLGVPSRMNIGQV LELHLGMAARALGIHVATPVFDGANEEDVWSTVEEAGMARDAKTILYDGRSGEAFDNR ISVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYG AAYTLQEILTIKSDDVVGRVKTYEAIVKGESVPEPGVPESFKVLIKELQSLGMDVKML SADEEEIEMRDMDDDDFTNQNDAFNIVQPENAAAEKTE" misc_feature 273018..276458 /gene="rpoB" /locus_tag="lmo0258" /note="DNA-directed RNA polymerase subunit beta; Reviewed; Region: rpoB; PRK00405" /db_xref="CDD:234749" misc_feature <273852..>273989 /gene="rpoB" /locus_tag="lmo0258" /note="DNA-directed RNA polymerase subunit beta'; Provisional; Region: PRK00566" /db_xref="CDD:234794" regulatory 276714..276719 /regulatory_class="ribosome_binding_site" gene 276728..280333 /gene="rpoC" /locus_tag="lmo0259" /db_xref="GeneID:987344" CDS 276728..280333 /gene="rpoC" /locus_tag="lmo0259" /EC_number="2.7.7.6" /experiment="EXISTENCE:[PMID:19448609]" /note="DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit beta'" /protein_id="NP_463790.1" /db_xref="GeneID:987344" /translation="MLDVNNFEYMKIGLASPDKIRSWSHGEVKKPETINYRTLKPERD GLFCERIFGPMKDWECSCGKYKRVRYKGVVCDRCGVEVTKSKVRRERMGHIELAAPVS HIWYFKGIPSRMGLVMDMSPRALEEIIYFASYVVTEPGDTPLEKKQLLSEREYRVYRE KYGKGFSAGMGAEAIKKILADIDLEKETNDLKEELKSAQGQRRTRAIRRLEVMEAFRN SGNNPSWMVLDVLPVIPPEIRPMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLGA PNIIVQNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGK RVDYSGRSVIVVGPNLKMYQCGLPKEMALELFKPFVMKELVGRGLAHNIKSAKRKIER MAPEIWDVLEEVIREHPVLLNRAPTLHRLGIQAFEPTLVEGRAIRLHPLVCTAYNADF DGDQMAVHVPLSAEAQAEARILMLAAQNILNPKDGKPVVTPSQDMVLGNYYLTLEREK AVGEGTIFKDINEAQLAYQNGYVHLHSRIAVFAGSIPNERFTDEQRNQLLITTVGKLI FNTILPKSFPYINEPTKFNLEIETPAKYFVDTTTDVRAHIAAQELIDPFKKKILGNII AEVFKKFHITETSKMLDRMKDLGFKISTKAGMTVGIADILTLEEKHEILEKAHDTVEK ITKSFRRGLITDDERYERVIAVWNAAKDEIQGKLILSLDRLNPIFMMQDSGARGNISN FTQLAGMRGLMADPSGRIVELPITSNFREGLTVLEYFISTHGARKGLTDTALKTADSG YLTRRLVDVAQDVIIREDDCGTDRGLTIKAIREGTEIIEPLEERLEGRYSRKTIRHPE TKEVIARENDLITEAIATQIVDAGIEEVTIRSAFTCNTKHGVCKKCYGKNLATGTEVE VGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIFEARNPKGQAIIT EVGGEVVSIEEGRDRQQEITIQGTDDRRSYNIPYTARLRVEEGTIVERGEALTEGSVD PKALIRVRDVLSVQEYLLAEVQKVYRMQGVEIGDKHVEVMVRQMLRKIRVMDTGDTNI LPGTLMDIHTFTEANREAILSGSQPATGRPVLLGITKASLETDSFLSAASFQETTRVL TDAAIKGKRDELLGLKENVILGKLVPAGTGIGRYRKLKSEVIKETAEVTDEITNI" misc_feature 276734..280315 /gene="rpoC" /locus_tag="lmo0259" /note="DNA-directed RNA polymerase subunit beta'; Provisional; Region: PRK00566" /db_xref="CDD:234794" regulatory 280343..280382 /regulatory_class="terminator" regulatory 280396..280401 /regulatory_class="ribosome_binding_site" gene 280410..280955 /locus_tag="lmo0260" /db_xref="GeneID:987345" CDS 280410..280955 /locus_tag="lmo0260" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463791.1" /db_xref="GeneID:987345" /translation="MITHVIWDMGETLNTVPNTRYDHYPLDTYPEVVLRKDAKETLEK VKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIF DFTLNELQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERQPLVAPPFV IPVWDLADVPEALLLLKKISS" misc_feature <280470..280928 /locus_tag="lmo0260" /note="FMN and 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB, HAD superfamily (riboflavin biosynthesis) [Coenzyme transport and metabolism]; Region: YigB; COG1011" /db_xref="CDD:440635" regulatory 281007..281012 /regulatory_class="ribosome_binding_site" gene 281021..282481 /locus_tag="lmo0261" /db_xref="GeneID:987346" CDS 281021..282481 /locus_tag="lmo0261" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phospho-beta-glucosidase" /protein_id="NP_463792.1" /db_xref="GeneID:987346" /translation="MTEVKKQFPKGFLWGGATAANQVEGAYDVDGKGLSTADMVKFIP KEERTKDLELDVSKAEIEAIIAGKVEGRFPKRDGVDFYHHYKEDIALFAEMGFKTFRL SLNWARIFPNGDDKEPNEKGLEFYDKVFDELLKYDIEPLVTLSHYETPLNLTLKYNGW ADRRVIGFFTNYAETVFKRYKNKVKYWLTFNEINVISLSAYTGGGVLLEDAKNPLELS YQAGHHQFVASALATKLAHEIIPGSQVGCMLARMATYPATNNPDDILKAQYENQQNLF FTDVHARGEYPSFMNRFFQENDIHIVKEVGDDEILKAHTVDFISFSYYMSLSATASPE GDRSAGNLMGGVKNEYLESSDWGWQIDPKGLRWTLNDLYSRYELPLFIVENGLGAYDT VEEDGKIHDDYRIDYLRKHIEQMKEAIADGVDLMGYTSWGPIDLVSASTSEMSKRYGF IYVDQDDWGKGTLERSRKDSFFWYKKVIETNGEDLD" misc_feature 281033..282457 /locus_tag="lmo0261" /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase [Carbohydrate transport and metabolism]; Region: BglB; COG2723" /db_xref="CDD:442035" regulatory 282493..282525 /regulatory_class="terminator" gene 282755..284227 /gene="inlG" /locus_tag="lmo0262" /db_xref="GeneID:987350" CDS 282755..284227 /gene="inlG" /locus_tag="lmo0262" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin G" /protein_id="NP_463793.1" /db_xref="GeneID:987350" /translation="MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPI NEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNM LGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPL ANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNA YGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPI VEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAV DKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVGWYD AKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDSA DATSTKLPKTSDDSSMIPTILGTLFIGGAILILRKKTTNI" misc_feature 282755..284209 /gene="inlG" /locus_tag="lmo0262" /note="InlH/InlC2 family class 1 internalin; Region: internalin_H; NF033188" /db_xref="CDD:467985" misc_feature 282962..283051 /gene="inlG" /locus_tag="lmo0262" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 283052..283117 /gene="inlG" /locus_tag="lmo0262" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 283118..283183 /gene="inlG" /locus_tag="lmo0262" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 283184..283249 /gene="inlG" /locus_tag="lmo0262" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 283250..283315 /gene="inlG" /locus_tag="lmo0262" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" regulatory 284239..284278 /regulatory_class="terminator" gene 284365..286011 /gene="inlH" /locus_tag="lmo0263" /db_xref="GeneID:987355" CDS 284365..286011 /gene="inlH" /locus_tag="lmo0263" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin H" /protein_id="NP_463794.1" /db_xref="GeneID:987355" /translation="MKKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAI NVIFPDPALANAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIG LELKDNQITDLTPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPL AGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDN KISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLV VPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFS GTVTQPLTEAYTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGTKW DFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFT GWYDAKTGGTKWDFATGKMPAGNITLYAQFTKNDNPNPDDPTTNTPTGNGDGTSNPSN SGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK" misc_feature 284365..286008 /gene="inlH" /locus_tag="lmo0263" /note="InlH/InlC2 family class 1 internalin; Region: internalin_H; NF033188" /db_xref="CDD:467985" misc_feature 284662..284727 /gene="inlH" /locus_tag="lmo0263" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 284728..284793 /gene="inlH" /locus_tag="lmo0263" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 284794..284859 /gene="inlH" /locus_tag="lmo0263" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 284860..284925 /gene="inlH" /locus_tag="lmo0263" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 284926..284991 /gene="inlH" /locus_tag="lmo0263" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 284992..285057 /gene="inlH" /locus_tag="lmo0263" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 285058..285123 /gene="inlH" /locus_tag="lmo0263" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" regulatory 286023..286066 /regulatory_class="terminator" gene 286219..287718 /gene="inlE" /locus_tag="lmo0264" /db_xref="GeneID:987358" CDS 286219..287718 /gene="inlE" /locus_tag="lmo0264" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin E" /protein_id="NP_463795.1" /db_xref="GeneID:987358" /translation="MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINE IFTDPVLTDNVKTLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELE LIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAG LSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKV SDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVP NVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGT VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDF GIDKMPASDITLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEG INNLNSSGEDKVNIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK" misc_feature 286222..287715 /gene="inlE" /locus_tag="lmo0264" /note="InlH/InlC2 family class 1 internalin; Region: internalin_H; NF033188" /db_xref="CDD:467985" misc_feature 286444..286509 /gene="inlE" /locus_tag="lmo0264" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 286510..286575 /gene="inlE" /locus_tag="lmo0264" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 286576..286641 /gene="inlE" /locus_tag="lmo0264" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 286642..286707 /gene="inlE" /locus_tag="lmo0264" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 286708..286773 /gene="inlE" /locus_tag="lmo0264" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 286774..286839 /gene="inlE" /locus_tag="lmo0264" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 286840..286905 /gene="inlE" /locus_tag="lmo0264" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 286906..286971 /gene="inlE" /locus_tag="lmo0264" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" regulatory 287728..287775 /regulatory_class="terminator" regulatory 287838..287843 /regulatory_class="ribosome_binding_site" gene 287853..288992 /locus_tag="lmo0265" /db_xref="GeneID:987360" CDS 287853..288992 /locus_tag="lmo0265" /experiment="EXISTENCE:[PMID:19448609]" /note="dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites." /codon_start=1 /transl_table=11 /product="succinyl-diaminopimelate desuccinylase" /protein_id="NP_463796.1" /db_xref="GeneID:987360" /translation="MDQQKKIQILKDLVNIDSTNGHEEQVANYLQKLLAEHGIESEKV QYDLDRASLVSEIGSSNEKVLAFSGHMDVVDAGDVSKWKFPPFEATEHEGKLYGRGAT DMKSGLAAMVIAMIELHEEKQKLNGKIRLLATVGEEIGELGAEQLTQKGYADDLDGLI IGEPSGHRIVYAHKGSINYTVKSTGKNAHSSMPEFGVNAIDNLLLFYNEVEKFVKSID ATNEILGDFIHNVTVIDGGNQVNSIPEKAQLQGNIRSIPEMDNETVKQVLVKIINKLN KQENVNLELIFDYDKQPVFSDKNSDLVHIAKSVASDIVKEEIPLLGISGTTDAAEFTK AKKEFPVIIFGPGNETPHQVNENVSIGNYLEMVDVYKRIATEFLS" misc_feature 287859..288989 /locus_tag="lmo0265" /note="succinyl-diaminopimelate desuccinylase; Reviewed; Region: PRK08588" /db_xref="CDD:181490" regulatory 289045..289087 /regulatory_class="terminator" regulatory 289125..289130 /regulatory_class="ribosome_binding_site" gene 289139..289555 /locus_tag="lmo0266" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987368" CDS 289139..289555 /locus_tag="lmo0266" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_463797.1" /db_xref="GeneID:987368" /translation="MVKKEERLGVLLWFRFSRFYNRNMKLTNQNLRAAGISTAQFDCI AQIGLDKEITQQQLAEKLVVTKGNVTQLLAKLEQLGYITRTKTGREKHITLTEKGQAC YRENVPKQEAFQQAQFDKLTRDEQKELLKLLKKLGE" misc_feature 289139..289522 /locus_tag="lmo0266" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" regulatory 289546..289551 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0266" gene 289562..290521 /locus_tag="lmo0267" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987388" CDS 289562..290521 /locus_tag="lmo0267" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463798.1" /db_xref="GeneID:987388" /translation="MKLTGIHHVSIFTANARANFDFYTKIMGLRLVKKSVNQDDPYTY HLYYGDEIGSPGTALTFFEVPNMAKNHPSRNAISGLSLRVPSDEALHYWDKRLDEHRI FHSKPIDQFGRKIIRLKDTDGLPVNLISDETSTQVTEVTPWEDSLVPAEYAIRGLGPV RFSVFKKEKTDRLLTKILGFERIGAYEDDDKLVTVFKTGNVGLGGEVHVESRPDLEQG NLGAGGIHHVAFRVPTDGDLIGWTEMIQDLGYKNSGYVDRFYFHSLYFRESNGILIEL ATDEPGFQTDFTKEHGTYVDLPPHLEERREDILAHLKPLDTDK" misc_feature 289574..289948 /locus_tag="lmo0267" /note="vicinal oxygen chelate (VOC) family; Region: VOC; cl14632" /db_xref="CDD:472697" misc_feature 290027..290506 /locus_tag="lmo0267" /note="C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins; Region: PcpA_C_like; cd08347" /db_xref="CDD:319935" regulatory 290580..290585 /regulatory_class="ribosome_binding_site" gene 290593..291228 /locus_tag="lmo0268" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987396" CDS 290593..291228 /locus_tag="lmo0268" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoglycerate mutase" /protein_id="NP_463799.1" /db_xref="GeneID:987396" /translation="MAEGLRTIYFVRHGKTEWNMTGQMQGWGDSPLVAEGIDGAKAVG EVLKDMQIDAVYTSTSKRTQDTAAYILGDREIEIQPLEELKEMGFGTWEGIRVTEIDE KHPEERAKILHSPETYKAEVNGGETYYELAERLLEGVEKIIADNPNGNILVVSHGMSL TLLLYLLQGGTIEDHRKEAPRILNTSISIVEYQNGEFSLKKINEIGHLDLK" misc_feature 290614..291207 /locus_tag="lmo0268" /note="Histidine phosphatase superfamily (branch 1); Region: His_Phos_1; pfam00300" /db_xref="CDD:459751" regulatory 291296..291301 /regulatory_class="ribosome_binding_site" gene 291312..293198 /locus_tag="lmo0269" /db_xref="GeneID:987397" CDS 291312..293198 /locus_tag="lmo0269" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_463800.1" /db_xref="GeneID:987397" /translation="MKRIVKIFLHYLLGILGIILISCVPAIFSKVTSWSSSTYWEALK SIFTAIFHPTKWEISYQGSAEVFHVSLADFITGPYFYSMKIIVASLVISALIAYLLVI ATFRGPKWLRRGLSGFLSILQAFPDFSFIFLIQMAVVYIYQQTGVFTLNFYSLNGEQI YAAPIVCLSIIPTVLFYKMMMLLMENEWQADYIQLARGKGLNDKAILLRHATPNMMQS LFYQSKTIVWFILSAYLVVEFLFGIEGVLYYLLAGFSPLNIFLVLALVFTPFYFFYTL IDLWISCGKNTESANVTRIPLHWNSFQKTFKEKVNLKSKWRNFVVTTGQLLKRPSFSI PLVTLSILLIASLIYGLMGDKINSLKFISDATGRVTDMAPFKPNAQVWLGTDQAGNSI LDQLLVGIKYTLLIAVIIATLRVVIGYILAVPLAFFSKPRTRNFVQATADGMHYLPLS LLVFIIMVNEFISYSGVFETSLFTRITFQILIMVVIVLPITTNRISSEISQVLKKEFV LSALVFGGNARWILTKHINPQIWSKLILIWIEQLIQTLQMFVHLAIFGIFIGGAIMGA DDGMLNPAIPELSGLIANAKFVFANHQFWIILPPLVVFMILILCFQMMANSLLKREED SKKA" misc_feature <291552..292112 /locus_tag="lmo0269" /note="ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism]; Region: DppB; COG0601" /db_xref="CDD:440366" misc_feature 292251..293165 /locus_tag="lmo0269" /note="ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism]; Region: DppC; COG1173" /db_xref="CDD:440786" regulatory complement(293182..293217) /regulatory_class="terminator" regulatory 293193..293217 /regulatory_class="terminator" gene complement(293212..293841) /locus_tag="lmo0270" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987398" CDS complement(293212..293841) /locus_tag="lmo0270" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0270" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463801.1" /db_xref="GeneID:987398" /translation="MAEYQSQLARIQAKITTLKEKDVDLNLFGSESHAYKLNQPLSNQ TIAAFENEHQIALPQGYRAFLEQIGDGGMGPYYGLETLVDGLCSSLDYKAEKYGVQTL SKPFPHTDDWNGPGYKEGMSDEAYDAWQELCFSDKEVFGLLRIANFGCGVSINLVVNG PSYGEIWVDDRNNDNGVYPDFYFGNEERLGFLEWYELWLDKSIEEFEKA" misc_feature complement(<293602..293724) /locus_tag="lmo0270" /note="SMI1 / KNR4 family; Region: SMI1_KNR4; smart00860" /db_xref="CDD:214864" gene complement(293845..295281) /locus_tag="lmo0271" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987399" CDS complement(293845..295281) /locus_tag="lmo0271" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phospho-beta-glucosidase" /protein_id="NP_463802.1" /db_xref="GeneID:987399" /translation="MEHQKRSPFPKDFLWGSASAAYQIEGAWDADGKGKSVWDEYVRI PGTTFKGTNGDVAVDHYHRYKEDVKLMADAGLKAYRFSIAWTRIFPNGKGEVNEAGLQ FYDNLIDELLKYDIEPLVTLYHWDIPQALFDEYGGWESRQVIEDFTNYSTTLFKRYGD RVKYWVSLNEQNIFVGMGYGQALHPPKVSDPKRMYAVNHIANLANASVIKAFHEIVPD GKIGPSFAYTPHYPIDTDPKNVQAADDAEELNSYFWMDMYAFGRYPKAVWKYLEENDI APVIEDGDMELLASAKPDFMGVNYYQSATVAYNPLDGVGQNNEMNFTGKKGSTKETGV PGVYKKVVNPFVKTTNWDWTIDPKGLQIALRRINSRYALPILITENGLGEFDKLVDGE VNDDYRIDYLSAHATAIRDAISDGVDMLGYCTWSFTDLLSWLNGYQKRYGFVYVDRDV EDDAPMTRIPKKSYYWYKQVIETNGADL" misc_feature complement(293866..295269) /locus_tag="lmo0271" /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase [Carbohydrate transport and metabolism]; Region: BglB; COG2723" /db_xref="CDD:442035" regulatory complement(295290..295295) /regulatory_class="ribosome_binding_site" regulatory complement(295358..295392) /regulatory_class="terminator" gene complement(295401..296213) /locus_tag="lmo0272" /db_xref="GeneID:987400" CDS complement(295401..296213) /locus_tag="lmo0272" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463803.1" /db_xref="GeneID:987400" /translation="MYKLIAIDIDGTLLTDDHKVTDEVKEAIRQAKLKGVKVVLCTGR PLVGVENYLTELELREEGDYVISFNGAFVQDTFTKEVISHLTLGIEDLKDIYEVSLNS NLHMHFFDDKALYTPNREIGKYTIVEAYLTGSQLIYKEIENVPEDFIMSKAMFIEEAP ELEVGIAKIPESFREKYHLVRSTPFYLEILNRDASKGNAVKELSEKLGIKQSEVICIG DQENDVTMLEFAGLGIAMGNAPERIKQLADYTTASNNDSGVAKAIQKFVLDK" misc_feature complement(295407..296207) /locus_tag="lmo0272" /note="sugar phosphate phosphatase; Provisional; Region: PRK10513" /db_xref="CDD:182509" regulatory complement(296221..296226) /regulatory_class="ribosome_binding_site" regulatory 296335..296342 /regulatory_class="ribosome_binding_site" gene 296349..296852 /locus_tag="lmo0273" /db_xref="GeneID:987401" CDS 296349..296852 /locus_tag="lmo0273" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0273" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463804.1" /db_xref="GeneID:987401" /translation="MKRNYHVKFLNEKDVELAEAVCAASEDYYLIEQDKSASKSDALK IITEIPDGKTRFDKFVLAVLDENEKPIGLVDIVSDYPRKGRWFIGLLLLTPDARHNGL GKVLHQTIKEWASDGGADSLALGVLAENEKGRGFFEHLGYTKEETKQASYGGKEQEVS IFTLAIK" misc_feature <296535..296846 /locus_tag="lmo0273" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" regulatory complement(296847..296882) /regulatory_class="terminator" regulatory 296858..296893 /regulatory_class="terminator" gene complement(296889..297551) /locus_tag="lmo0274" /db_xref="GeneID:987410" CDS complement(296889..297551) /locus_tag="lmo0274" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0274" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463805.1" /db_xref="GeneID:987410" /translation="MAYPFNHKEFVAMMEQYNLKSNSITIPEHTILNDLVTENRDCVY LLKSGILAGYIDFDNDKIYSIFTSNFFMGYYTIFDNSSLVLTYQTLTECELIIYKKKD IEYSLSLFPENFSFQYTIMRTIAKHGYYKSLLQYRDKKDQLAFVFEMLVKILDIPVED GVAVLPKSISTTVIKNYCTLSKAFFYSQLKELKEAGIISKVKLQWRINMEALSEKNNS IN" misc_feature complement(296910..297431) /locus_tag="lmo0274" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" regulatory complement(297563..297568) /regulatory_class="ribosome_binding_site" gene complement(297810..298652) /locus_tag="lmo0275" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987414" CDS complement(297810..298652) /locus_tag="lmo0275" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463806.1" /db_xref="GeneID:987414" /translation="MKKGILNVLLVFALIAGLSVPSSMQVEAAAPTIKVHFIDVGQGD AIYIKAPSGEDILIDAGNKGKGKTVVNYLKKLKVKDIEIMIASHSDADNIGGLPEVMN NIKVKNLYAPKSTNTTAAYKNFVNTAKKKKLTIKTAKAGVKLPVKGVNAQFVGPVKTY GKTDRNNWSAVLHVAYKKNTFLFTGDAQTKAENDMIKAKKTLRADVLKVSTQGSKAAT SKAFVNVVKPKYAIISVGKNGYGHPTSQTVNTLKKAKAKVYRTDRNKTVVVTGNGSSY SIGK" misc_feature complement(297819..298553) /locus_tag="lmo0275" /note="DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily [Intracellular trafficking, secretion, and vesicular transport]; Region: ComEC; COG2333" /db_xref="CDD:441904" regulatory complement(298660..298665) /regulatory_class="ribosome_binding_site" gene complement(298669..299490) /locus_tag="lmo0276" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987415" CDS complement(298669..299490) /locus_tag="lmo0276" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463807.1" /db_xref="GeneID:987415" /translation="MTKKYLICSDIDGTLLRQDQTVSKKTRDLIQTLEKDGHIFSIST GRMYRSAREVGFQVSSSGHVIASNGSYAAIRDEQLLKTTLEEKAIRSTYDIMSDFDLP LFFFSTNTLFYTKEPPAFFQNLADKSRLDTGHNSFSLVSINEKGIFDENMHQFLNAIV VAEEDASKLTEVRAALNEANGIRVLSSHHNNLEILPANSDKKTAVEALGKHYNIPRER IITFGDGENDIGMLQYAGTGVAMANASDNVKAAANHLTDTNEADGVYKFLKEFIS" misc_feature complement(298687..299472) /locus_tag="lmo0276" /note="haloacid dehalogenase-like hydrolase; Region: Hydrolase_3; pfam08282" /db_xref="CDD:429897" misc_feature complement(order(298807..298812,298816..298824, 298888..298890,299356..299361,299449..299463)) /locus_tag="lmo0276" /note="active site" /db_xref="CDD:319818" regulatory complement(299498..299503) /regulatory_class="ribosome_binding_site" regulatory 299592..299597 /regulatory_class="ribosome_binding_site" gene 299607..300578 /locus_tag="lmo0277" /db_xref="GeneID:987427" CDS 299607..300578 /locus_tag="lmo0277" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_463808.1" /db_xref="GeneID:987427" /translation="MGNLNWAILGPGSIAHEFAEGMRGMNREIYAVGARSLEKGQAFA SQYGIENVYDDFDKMLADPAIDVVYIATPHSNHYEFIMKSLHNGKHVLAEKAITVSSK ELNEINVLAKEKGLIVKEAMTIFHMPLYKKLREIVESGAIGKLKIIQVAFGSAKEKDP KNRFYNMDLAGGALLDIGTYALSFARYFLSETPDEVLTTMKKFETGVDEQSGILLKNN EEELAVVSLSFRAKMPKRGVIACEEGFITVDEYPRASRATVTHTATGKVEEIEVGETS KALEYEITAMEESVATGENMTYQLTNDVIAIMSDVRTQWGIKFPFEK" misc_feature 299607..300353 /locus_tag="lmo0277" /note="Predicted dehydrogenase [General function prediction only]; Region: MviM; COG0673" /db_xref="CDD:440437" regulatory complement(300574..300602) /regulatory_class="terminator" regulatory 300585..300613 /regulatory_class="terminator" gene complement(300617..301717) /locus_tag="lmo0278" /db_xref="GeneID:987432" CDS complement(300617..301717) /locus_tag="lmo0278" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter ATP-binding protein" /protein_id="NP_463809.1" /db_xref="GeneID:987432" /translation="MAQLSLEHIYKIYDNKVTAVSDFNLEIDDKEFIVFVGPSGCGKS TTLRMIAGLEEISKGELSIDGKVMNNVAPKDRDIAMVFQNYALYPHMTVYDNMAFGLK LRKMPKDEIKKRVEHAANILGLTEYLKRKPSALSGGQRQRVALGRAIVRDAKVFLMDE PLSNLDAKLRVQMRAEITKLHQQLDTTMIYVTHDQTEAMTMATRIVIMKDGVIQQVGS PKQVYDHPVNMFVAGFIGSPAMNFFKGRLEGSNFIGDDFTIEVPEGKLKLLKDRGFDG KNIVFGIRPEDIHDEPIVIEANPGYTFKATTIVAELTGAEFMLHSRVGTHEFVARVDA RSEHQPNEVLTLAFEMSKSHFFDPETEDNLTD" misc_feature complement(300626..301717) /locus_tag="lmo0278" /note="ABC-type sugar transport system, ATPase component MalK [Carbohydrate transport and metabolism]; Region: MalK; COG3839" /db_xref="CDD:443050" regulatory complement(301727..301732) /regulatory_class="ribosome_binding_site" regulatory 301997..302001 /regulatory_class="ribosome_binding_site" gene 302008..304140 /locus_tag="lmo0279" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987434" CDS 302008..304140 /locus_tag="lmo0279" /EC_number="1.17.4.2" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates" /codon_start=1 /transl_table=11 /product="anaerobic ribonucleoside triphosphate reductase" /protein_id="NP_463810.1" /db_xref="GeneID:987434" /translation="MYVEQLNEQMVIKRDGRKASFDLIKIRNAVEASMKAINLEDETF LEEILLEVVSELPNKADMTIDEIQHCVENTLMKSTYPDVARAYIEYRHDRDHERENIT DMHKSVEKLLQKDKTVVNENANKDATVFNTQRDLTAGAVAKSYALKYMLPKHVSNAHL KGEIHFHDLDYSPYHAMTNCCLIDIEGMLSKGFTIGNANVESPKSIQTATAQIAQIIA NVASSQYGGCSVDRIDEVLSVYARLNFEKHKKDAMEWVVPEKQEGYAAEKTRKDIYDA MQSLEYEINTLYTSNGQTPFVTLGFGLGEDWFAREIQKAILKVRIGGVGKDKHTAIFP KLVFSIRRGTNLNAEDPNYDIKQLALECSSKRMYPDVLNYDSLVRLTGDFKVPMGCRS FLPAWENENGEHVNAGRNNLGVVTLNIPRIAIQSGGDKERFWEIFHERMKTVKDALLF RLNRVRQARPENAPILYKYGAFGKRLQDGEDVDQLFNKERSTISIGYIGLYEAATVFY GGEWEGDKEAKNFTLDIVKELKAYADNWKDEYGYWFSVYSTPSESLTDRFNRLDKEKY GVIKDITDKDYYQNSFHYDVRKKIDFEKDYPEFCSGGFIHYCEYPKMVHNTKALEAVW DYSYDRVAYLGTNTPIDKCYECDFEGEFVPTEEGFKCPSCGNTDPEKADVVKRTCGYL GNPMKRPMVHGRHVEISNRVKHMENLGE" misc_feature 302038..304128 /locus_tag="lmo0279" /note="anaerobic ribonucleoside triphosphate reductase; Provisional; Region: PRK09263" /db_xref="CDD:236436" misc_feature order(302500..302502,302506..302511,302605..302619, 302629..302631,302638..302643,302650..302652, 302746..302748,303658..303669,303676..303678) /locus_tag="lmo0279" /note="effector binding site [active]" /db_xref="CDD:153084" misc_feature order(302545..302547,302686..302688,302893..302895, 303172..303177,303244..303246,303652..303654, 303661..303663) /locus_tag="lmo0279" /note="active site" /db_xref="CDD:153084" misc_feature order(303934..303936,303943..303945,303988..303990, 303997..303999) /locus_tag="lmo0279" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:153084" misc_feature 304036..304050 /locus_tag="lmo0279" /note="glycine loop [active]" /db_xref="CDD:153084" regulatory 304121..304126 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0279" gene 304133..304684 /locus_tag="lmo0280" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987436" CDS 304133..304684 /locus_tag="lmo0280" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="anaerobic ribonucleotide reductase activator protein" /protein_id="NP_463811.1" /db_xref="GeneID:987436" /translation="MNNPKPCEWKSNELSRGYIADYKAFNFVDGEGVRCSLYVSGCPF HCEGCYNKAAQSFKYGKPYTKELEDDILKDIGHESVQGLTLLGGEPFLNTATCLSIVK RIRATYGETKDIWSWTGYTWDEMMQETADKLELLSLIDVLVDGRFEQKLFDPNLAFRG SSNQRIIDVQKSLAAGEVVLYEL" misc_feature 304214..304633 /locus_tag="lmo0280" /note="4Fe-4S single cluster domain; Region: Fer4_12; pfam13353" /db_xref="CDD:433138" regulatory 304690..304719 /regulatory_class="terminator" regulatory complement(304904..304937) /regulatory_class="terminator" gene complement(304942..305613) /locus_tag="lmo0281" /db_xref="GeneID:987437" CDS complement(304942..305613) /locus_tag="lmo0281" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0281" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463812.1" /db_xref="GeneID:987437" /translation="MDALFNYKEFVRLSHEGNIKYEKLKVPKHTDLVDTASQRNNHVY LIVEGFVSISMNPQSNSIYTVLGKGSFVNYYSLFQGNVDDFLFTAISPCTIYKYSFKD LEYFLSMFPENFGFQFFIMRDLARHAFFKSLFAETSSSDKLELSFSNMGKLHGTLYEK DSVILPKEMRTSTIAAYSNLSKSSFYKQLTLLKEHGKIWKKGKEWVVKDKGLYNYVKV RQFDD" misc_feature complement(304987..305550) /locus_tag="lmo0281" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" regulatory complement(305623..305628) /regulatory_class="ribosome_binding_site" gene complement(305775..306554) /locus_tag="lmo0282" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987439" CDS complement(305775..306554) /locus_tag="lmo0282" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463813.1" /db_xref="GeneID:987439" /translation="MWKLALCQTDVVFKYPDANYARIEKAIVEAAKNGADIAVLPEMW NTGYALNELAGVADLNGGRTKEFLATLSEKHQIAIIGGSVSISEGTKFSNTMYAFDKY GGLLSSYKKVHLFQLMNEHLYLEAGNDKNLFRLDGVSCAGFICYDIRFPEWIRKHTSE GSEVIFVSAQWPAERVTQWEQLLIARAIENQTFVVAVNRVGDDPNNHFNGHSLVIDPL GNIVVHGGEEEGNIYAEIDLNLVAETRGIIPVFTDRRPELY" misc_feature complement(305790..306548) /locus_tag="lmo0282" /note="Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases); Region: nitrilase_5; cd07583" /db_xref="CDD:143607" misc_feature complement(order(306045..306047,306108..306113, 306117..306122,306195..306197,306210..306212, 306222..306224,306429..306431)) /locus_tag="lmo0282" /note="putative active site [active]" /db_xref="CDD:143607" misc_feature complement(order(306120..306122,306222..306224, 306429..306431)) /locus_tag="lmo0282" /note="catalytic triad [active]" /db_xref="CDD:143607" misc_feature complement(order(305790..305801,305922..305927, 305988..305993,305997..306005,306009..306014, 306087..306092,306099..306113,306117..306119, 306171..306179,306198..306200,306210..306221)) /locus_tag="lmo0282" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:143607" regulatory complement(306563..306568) /regulatory_class="ribosome_binding_site" gene complement(306644..307306) /locus_tag="lmo0283" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987440" CDS complement(306644..307306) /locus_tag="lmo0283" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_463814.1" /db_xref="GeneID:987440" /translation="MSLFFEEWGPILWQGFLETLTMTGITLVISLAIGLPLGVFLTLT RKGGQSENLVAYSILNWVINILRSLPFIILLFLMIPVTRFVVGTTIGIQGVIMPLVVF TAPYIARLMESALLEVDRGVVEAYQAMGISTPKIIWSVVIREARSGIVLGLTIATIGL IGATAMAGLVGAGGLGTIAYQYGFQRFEPTVMYTTIIILIIMVQALQSFGNFLSRRLK KD" misc_feature complement(306650..307306) /locus_tag="lmo0283" /note="ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; Region: MetP; COG2011" /db_xref="CDD:441614" gene complement(307303..308319) /locus_tag="lmo0284" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987441" CDS complement(307303..308319) /locus_tag="lmo0284" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_463815.1" /db_xref="GeneID:987441" /translation="MIELHQVSKSFNVNGKTVEAVKNVSITVEKGEIFGVVGYSGAGK STLVRCINLLERPDAGQVVIDGKNLSTLSSKELRVARRKIGMIFQGYNLLKTATVYDN IAKPLKLEGVPKNEIETRVNKYLSIVGLEDKRNNYPSQLSGGQKQRVAIARALAHEPE ILLSDEATSALDPETTEAILQLLLKINAELGITIFLITHELDVIQRICDRVAVMENGH LVEQGTVLDIFTKAKHATTKRFVGSEASFDIPQDLLEKYVATGKLVSLHFIGDEADEP ALALVSRKFDVLPSILAGGIDHLKNGTLGKLLVHLKGDEVEYSKAISYLKESGVVVEE VELL" misc_feature complement(307333..308319) /locus_tag="lmo0284" /note="ABC-type methionine transport system, ATPase component [Amino acid transport and metabolism]; Region: AbcC; COG1135" /db_xref="CDD:440750" regulatory complement(307317..307322) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0284" regulatory complement(308329..308334) /regulatory_class="ribosome_binding_site" gene complement(308334..309155) /locus_tag="lmo0285" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987445" CDS complement(308334..309155) /locus_tag="lmo0285" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="NP_463816.1" /db_xref="GeneID:987445" /translation="MKKLTKGLGILLASSLVLGLAACGGGSDDKALSTEKITIGTTAG PHQQIAEEVQKLAKKDGLEIKIKTFDDYNTPNTALNDGDLDANNYQTIPFLEQQKKDK GYKLDVAFKTVAFPMGIYSNDIKDLKNLKKGDKIAVPNDPSNEYRGLKLFEDAGVIKL KDGVEEKATKKDIAENPLDLEIVELEASQIPAQLDEVAAAAINTNFAMGAGLSINKDA IYHEPTKDNPYPNVFVVRSANKDDEVVKTLEKYYHSDEVKAFIEKEFNGSVVPAF" misc_feature complement(308337..309155) /locus_tag="lmo0285" /note="ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]; Region: NlpA; COG1464" /db_xref="CDD:441073" regulatory complement(309163..309168) /regulatory_class="ribosome_binding_site" gene 309266..309385 /locus_tag="lmos14" /db_xref="GeneID:18245183" misc_RNA 309266..309385 /locus_tag="lmos14" /product="SAM" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245183" regulatory 309524..309529 /regulatory_class="ribosome_binding_site" gene 309538..310719 /locus_tag="lmo0286" /db_xref="GeneID:987447" CDS 309538..310719 /locus_tag="lmo0286" /experiment="EXISTENCE:[PMID:19448609]" /note="produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_463817.1" /db_xref="GeneID:987447" /translation="MKISKRLQNLPDQFFSSLVEKVGKKVAEGHDVINLGQGNPDQPT PKHIVEAMKTASEKPLNHKYSLFRGKQELKQAAADFYAREYNVTIDPNTEVAILFGTK TGLVELPMCLMDPGDTMLLPDPGYPDYLSGVVLGEVQFEKMPLIAENDFLPDFTKIPE DIAEKTELMYLNYPNNPTGAVATADFFEETVAFAKNHNIVVAHDFAYGGIGFDGKKPI SFLETNGAKEVGIELYTLSKTYNMAGWRVGFAVGNSEVIEAINLIQDHMYVSLFPGIQ DAAIEALTGDQACVRELTARYENRRDAFISACREIGWEAVAPAGSFFAWMPVPEDFTS SEFADYLLEEVSVAVADGSGFGEFGEGYVRVGLLMDEERLEEAVTRVSKLHLFDKVTQ Q" misc_feature 309538..310698 /locus_tag="lmo0286" /note="transaminase; Reviewed; Region: PRK08068" /db_xref="CDD:181219" regulatory 310915..310920 /regulatory_class="ribosome_binding_site" gene 310932..311645 /locus_tag="lmo0287" /db_xref="GeneID:987448" CDS 310932..311645 /locus_tag="lmo0287" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_463818.1" /db_xref="GeneID:987448" /translation="MAEKKILVVDDEKPIADIVKFNLNKEGFDVYCAYDGDEALELVE EVQPDLILLDIMLPGRDGIEVCREVRKKYDMPIIMVTAKDSEIDKVIGLELGADDYVT KPFSNRELIARVKANLRRHSQVSSSTAEEEENSELEIGSLIIHPDAYVASKRGETIEL THREFELLHYLAKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHP AWLVTRRGVGYYLRNPEQE" misc_feature 310941..311636 /locus_tag="lmo0287" /note="response regulator YycF; Region: resp_reg_YycF; NF040534" /db_xref="CDD:439744" regulatory 311656..311700 /regulatory_class="terminator" regulatory 311814..311819 /regulatory_class="ribosome_binding_site" gene 311830..313662 /locus_tag="lmo0288" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987449" CDS 311830..313662 /locus_tag="lmo0288" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component sensor histidine kinase" /protein_id="NP_463819.1" /db_xref="GeneID:987449" /translation="MHKMRFFQSVQFKLVIMYLLLIIVAMQVIGAYFVRELEGQLEKN FQDSITNSITLLDYNAREEIIKNSDNSVKLQNDIRELLVDYSRASSNLIEVRIVDDKG KILGTSNLNNQGIVGQKSNDPLVKRTLSLGTTSEDKIYKDESNKNNRVWVNVSSIKNK GQVIGAIYLVADIESVYKQVDDITNIFITGTLIAMIITAVLGILLSRTITKPIVEMKR QAYAMARGNYSRKVKVYGVDEIGELADSFNTLTKRVQEAQAMTEGERRKLSSVLAYMT DGVIATDRRGKVILINTPAEKMLRVKHESANGRSIIDVLDIGDTYQFEDLMEVDGSLT MDRSTLDKPYVLRANFSVIQRETGFNNGVIAVLHDITDQEKVDQERRDFVSNVSHELR TPLTSMHSYLEALSDGAWEDKEIAPRFLEVTQNETERMIRLVNDLLKLSRMDGGREQL EKSFVNFTDFFNHIIDRFEMMKKETIMFKRHIPREPVIIEIDEDKVMQVLDNIISNAN KYSPDGGRISFYLKKFEDEIEVSIADEGLGVPDEDLANVFDRFFRVDKARSREMGGTG LGLAIAREVIEAHGGRIWAERNKNKGTIIKFTLPYSDLPEDDWE" misc_feature 311845..313632 /locus_tag="lmo0288" /note="cell wall metabolism sensor histidine kinase WalK; Region: HK_WalK; NF033092" /db_xref="CDD:467964" regulatory 313646..313651 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0288" gene 313659..314981 /locus_tag="lmo0289" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987451" CDS 313659..314981 /locus_tag="lmo0289" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463820.1" /db_xref="GeneID:987451" /translation="MMKKTGFRSFILTILVVLSIVLSYFIWKGQPDYEAINVKEVEKT TIDKTMTTSQVFKPYKLAVNANENNYQSLDADLLNELMAQGKAFSFSEVVLASKKSSE DYEKLIHKNGTIEIIFPNNIPFSIFAQIFQVEGEGLESAFFNRIVFDINKTDTGLHSV YFTNDDQENIYQSSLQNKDIDKIEKIVKKNESKLTQNDKLISNKRNLFLSSEKTKLNR KKYIIDSLEINLFTSALFQDSGTVKSEGNTYTDGSSVIEMDTDNKVLEYVNPSQERTN PEDLSSVKRAGLIQDSFNFVNDHAGWTGDGAYYFTGYAAESATTNFSLFIDNLQVYNE NGMADISVTEGLEAVYKYMRPFFRLDTDVPGEKKEVTLPSSYSVYSALAQNPNVKAEE IEDIVPGYHMTRSESSGMNRLVTLEPTWLYKYHDKWFIFQPDAEKAGE" misc_feature 313764..314978 /locus_tag="lmo0289" /note="YycH protein; Region: YycH; pfam07435" /db_xref="CDD:400011" regulatory 314968..314973 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0289" gene 314984..315823 /locus_tag="lmo0290" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987453" CDS 314984..315823 /locus_tag="lmo0290" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463821.1" /db_xref="GeneID:987453" /translation="MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEE RLKADNISHPDLSTKPTSGSIFTTERAAFTTKDVSDLTGQAITLKDNNKQIYSVLQTP VKAGKKGSNPEFQKFMESDVYRGESYQFWNYDKDARTLTFNQLINNNMVLFDEAGQIT FYLDQDDRVISYEQTWMSKQDDLKDKTNLMSATDALEAVYQHGELKQDSDVVSATFGY YTTVQLPSGNVYFPVWCFEVKHSGETNYVLVNAKDEQVINQSENKSTTEPGAELSSRQ KAK" misc_feature 314984..315757 /locus_tag="lmo0290" /note="YycI protein, regulator of the WalKR two-component signal transduction system [Signal transduction mechanisms]; Region: YycI; COG4853" /db_xref="CDD:443881" regulatory 315932..315937 /regulatory_class="ribosome_binding_site" gene 315945..316775 /locus_tag="lmo0291" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987454" CDS 315945..316775 /locus_tag="lmo0291" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463822.1" /db_xref="GeneID:987454" /translation="MFANKILTEKDTDQIRFSILASGSSGNATLVETGDQKILIDCGL SGKKMEGLFAQVGRDMNDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDN MIGEVSSDQKFQFDMETVKNFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGY VSDRMKGHIAGADAYLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEV ITDQTKRIYLGHLSKDNNMKELARMSVTQTLMAEGIDVGGKLEIFDTDPDNATSIFTI " misc_feature 315996..316559 /locus_tag="lmo0291" /note="uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain; Region: YycJ-like_MBL-fold; cd07733" /db_xref="CDD:293819" misc_feature order(316152..316154,316158..316160,316164..316169, 316347..316352,316413..316415,316557..316559) /locus_tag="lmo0291" /note="putative active site [active]" /db_xref="CDD:293819" regulatory 316861..316866 /regulatory_class="ribosome_binding_site" gene 316873..318375 /locus_tag="lmo0292" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987455" CDS 316873..318375 /locus_tag="lmo0292" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="heat-shock protein htrA serine protease" /protein_id="NP_463823.1" /db_xref="GeneID:987455" /translation="MDEKEKNLNENSENESTPKREVEDTLHTPESAQPVQETPIVEGV TPEGEKFAGATEDAAEASSTNAFFEEASNKESEPARPAPGPRRAGTTGGGAVPPNRVN NGGSGNGNGEPPKRGKHFIGYFLTALIGVIIGGLIIFFVAWDNGDNADTTSNSNNKAT KVEKVSVDTTSDVTKAVDKVQDAVVSVLNYQSSSSLDGTTTSEQEASSGSGVIYKKAN GKAYIVTNNHVVADANKLEVTFTNGKKSEAKLLGTDEWNDLAVLEIDDKNVTTVAAFG DSDSLKLGEPAIAIGSPLGTEFSGSVTQGIISGLNRAVPVDTNGDGTEDWEADVIQTD AAINPGNSGGALINIEGQVIGINSMKISMENVEGISFAIPSNTVEPIIEQLETKGEVE RPSLGVSLRDVDTIPETQQKNILKLPDSVDYGAMVQQVVSGSAADKAGLKQYDVIVEL NGQKVTNSMTLRKILYGNDVKIGDKVKVKYYRDGKEKSTDIKLEAAKTTT" misc_feature 317491..318360 /locus_tag="lmo0292" /note="Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]; Region: DegQ; COG0265" /db_xref="CDD:440035" regulatory 318385..318421 /regulatory_class="terminator" regulatory 319037..319042 /regulatory_class="ribosome_binding_site" gene 319049..319528 /locus_tag="lmo0293" /db_xref="GeneID:987456" CDS 319049..319528 /locus_tag="lmo0293" /experiment="EXISTENCE:[PMID:19448609]" /note="SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA" /codon_start=1 /transl_table=11 /product="rRNA large subunit methyltransferase" /protein_id="NP_463824.1" /db_xref="GeneID:987456" /translation="MNIQIVTVGKLKEKYLVQGIAEYLKRLSAYAKVTIVEVPDEKAP EVLSDAEMKQVKDKEGARILAKIPDDAYVIALAIDGKMKSSEEFAADLDKLATYGKSK VTFVIGGSLGLSEAVLKRSNERISFGRLTLPHQLMRLVLVEQVYRAFRIVRGEPYHK" misc_feature 319049..319525 /locus_tag="lmo0293" /note="23S rRNA pseudoU1915 N3-methylase RlmH [Translation, ribosomal structure and biogenesis]; Region: RlmH; COG1576" /db_xref="CDD:441184" gene complement(319560..320423) /locus_tag="lmo0294" /db_xref="GeneID:987457" CDS complement(319560..320423) /locus_tag="lmo0294" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="NP_463825.1" /db_xref="GeneID:987457" /translation="MDIENMKAFNKVAELKSISAAANELHHLQSNMSNKIKNIEKQFQ TQLFFRHSNGVELTKEGEKIYQQFKKMILLWEETIDIINNEEETISIGITQSSLPMEF NTIIKKFYQQFPNKKLSIVSGSTSELIPKIANRELTIAYVAELEKENLFQDSQIISQT LSWDKLVFAGNTAGKSVQKILAEERLYVFSKQCYSYRALATLINDFNIPNVSISEINI PETLVEICNNKLGVGIIPESIALNYHFLNYETLPTEYAALRKTLIYHADHTISNGEKW LIEKSKPAFKS" misc_feature complement(319587..320423) /locus_tag="lmo0294" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" regulatory complement(320429..320434) /regulatory_class="ribosome_binding_site" regulatory 320530..320534 /regulatory_class="ribosome_binding_site" gene 320542..321279 /locus_tag="lmo0295" /db_xref="GeneID:987458" CDS 320542..321279 /locus_tag="lmo0295" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="FMN-containing NADPH-linked nitro/flavin reductase" /protein_id="NP_463826.1" /db_xref="GeneID:987458" /translation="MNTTIQQLVKHVSVREFKNERLSDETKQHLLTAARSASSSHFVQ SFSILEITDEKLRKELAEITNSASYVNQTGTFYVFVGDLYRQSKLLLENNRTLDGLRN MESLLVSVIDATIAAQNMVIAAESLDLGICYIGGIRNDIGKVAELLNLPPFTIPVFGL TVGVPEYKNQVKPRLLLENQVGENQYPHEQFTDLKAYEELTKDYYALREKNQHQTSWG DKNVEFFEEIRRPEIASFLKKQGFTLD" misc_feature 320551..321231 /locus_tag="lmo0295" /note="nitroreductase similar to Escherichia coli NfsA; Region: NfsA-like; cd02146" /db_xref="CDD:380322" misc_feature order(320551..320556,320560..320568,320572..320574, 320626..320628,320632..320640,320644..320655, 320662..320673,320677..320700,320707..320709, 320785..320787,320857..320865,320869..320874, 320881..320886,320893..320898,320905..320907, 320917..320922,320938..320940,320953..320955, 320983..320988,320992..320994,321013..321015, 321055..321066,321070..321072,321076..321087, 321130..321132,321190..321195,321202..321207, 321214..321231) /locus_tag="lmo0295" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:380322" misc_feature order(320572..320580,320584..320586,320653..320661, 320665..320667,320740..320742,320746..320748, 320872..320877,320884..320886,320935..320949, 321055..321057,321061..321063) /locus_tag="lmo0295" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:380322" misc_feature order(320584..320586,320665..320667,320953..320958, 321049..321051,321055..321057,321151..321156, 321163..321165) /locus_tag="lmo0295" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:380322" regulatory 321332..321365 /regulatory_class="terminator" regulatory 321478..321483 /regulatory_class="ribosome_binding_site" gene 321490..322128 /locus_tag="lmo0296" /db_xref="GeneID:987461" CDS 321490..322128 /locus_tag="lmo0296" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0296" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463827.1" /db_xref="GeneID:987461" /translation="MKFLKKYGFYFLLLGVLSDFLTPYILGIFYPELNQMTRVMSVFG DVTSPVRGAFLVWSVVSGVFFVLALPAIYQSVVKTSRTLAILLASAIGLYGIGDCIFT GLFSIDTEQASWTFSTWVHNIGSGLGYAGFLIFPLFLVILYRKTGDKTRSNIYLVLLI VSLLSAGVYGLARIPAVNDLPVLDKIGFCQRISFFFNYLPIVVFGIDRIRKP" misc_feature 321526..322110 /locus_tag="lmo0296" /note="Protein of unknown function (DUF998); Region: DUF998; pfam06197" /db_xref="CDD:428818" regulatory complement(322119..322151) /regulatory_class="terminator" regulatory 322123..322158 /regulatory_class="terminator" gene complement(322134..324005) /locus_tag="lmo0297" /db_xref="GeneID:987506" CDS complement(322134..324005) /locus_tag="lmo0297" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional antiterminator BglG" /protein_id="NP_463828.1" /db_xref="GeneID:987506" /translation="MTISERQRSLLEKLNDSQKTVTAKALSEMLGVSSKTVRNDIMQI NQSFSSTIIASKAGKGYFLMPNEQLSQMNLTKNNENLHFELLRHIIEQDHTNFYDLAD QFFISESTLARIIKELNIVIAEKDESLCIIRKNNELLTEGGEEEKRRIFNLFLNQEIE NHQLSLDKYADYFDYCNLKQLSELIIAYHKKHEFFMNDFSTISFILHIAVLIERISMG SYIERTALLEQDKTSLEMAAHLAETLEKELQINIPTQELSYIARLYSGKLTTTSTIDA QVFGSVVTRLLEAVDQNFHIDFSADEKIATYLVAHISALYKRANHKQYLTNPLTEELK NKFPFIYNVSVYASAFIQKELAITFPDDEIAYIALHFLSASETINHGKKRKILLVTPY GAGSQRLIHNQLKKIPDFSIDLLVSQSIFDIKQFTLDKEIHLILTAEPLNLTTDIPVY HYDLLLAESDLQKIKHILETKQKTESISRKFFKKELFFPKQNFKSKEETITFLCEQLT AFDYCAPDYVAKVFEREQLSSTCYGNYYAIPHAIQRSAKKNAVAVCSLDKPIDWGGNR VKLVLLLTMKEERDNSFEELFGQLVTILNERSFVKKLAKQEDFQQFIELCEQKTLDS" misc_feature complement(322149..323978) /locus_tag="lmo0297" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" regulatory complement(324012..324017) /regulatory_class="ribosome_binding_site" gene complement(324104..325417) /locus_tag="lmo0298" /db_xref="GeneID:987507" CDS complement(324104..325417) /locus_tag="lmo0298" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS beta-glucoside transporter subunit IIC" /protein_id="NP_463829.1" /db_xref="GeneID:987507" /translation="MRFNTISEKMDQYISPLANKLSQQRHLKATRDAFMSMLPITLFG SIPIILKAAPVTDDTKNGFLLAWANFAEKYDLILNWISGITLGAMSLYICVGITYYLC KHYHEDFLRPLMFSIAGFFMLVLNPIKMGWDGKEVDISFLDGRGILLSIFVAIVTVEG YHWMRKKNVGRITMPDSVPASLSETFAALVPGIILMTFFSIIFIIFNLLDTTAIQFLY EKMAPSFKAADSLPFTILSIFLVHLFWFFGVHDAALAGILGPIRDGNLSINAAEKMAG QDLTNIFTTPFWTYFVIIGGSGSVLALAFLMMRSKSKQLSTVGKVGFLPSIFGISEPL IFGTPLMLNPIFFFPFIFTSVFNGVITYLCMYFGIVGKTFAVFSWQMPAPIGAFLSTM DWRAIVLVFILIFLNGLMYYPFLKVYEKNLVALEKEAEEENIAAN" misc_feature complement(324128..325408) /locus_tag="lmo0298" /note="Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]; Region: CelB; COG1455" /db_xref="CDD:441064" gene complement(325422..325712) /locus_tag="lmo0299" /db_xref="GeneID:987508" CDS complement(325422..325712) /locus_tag="lmo0299" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS beta-glucoside transporter subunit IIB" /protein_id="NP_463830.1" /db_xref="GeneID:987508" /translation="MKNIMLVCNAGMSTGMLAKKIEAASGNTLNVTAYSESEYTDYLD GVDLVLIGPQIRFLMPQIKQAVSVPVHAISPVKYGIMDGKGVYEDIQKLIGG" misc_feature complement(325428..325709) /locus_tag="lmo0299" /note="Phosphotransferase system cellobiose-specific component IIB [Carbohydrate transport and metabolism]; Region: CelA; COG1440" /db_xref="CDD:441049" regulatory complement(325426..325431) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0299" regulatory complement(325719..325724) /regulatory_class="ribosome_binding_site" gene complement(325729..327120) /locus_tag="lmo0300" /db_xref="GeneID:987510" CDS complement(325729..327120) /locus_tag="lmo0300" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phospho-beta-galactosidase" /protein_id="NP_463831.1" /db_xref="GeneID:987510" /translation="MNNNFLWGGATASYQCEGAWDVDGKAESMWDYYLHEAGLENGDV ASDHYHRYEEDIRMMKEGGQNSYRFSLSWPRIIKNRQGDINLKGIEFYQNLLDTCKKY DIEPFVTLYHWDLPQYWEETGGWLDHDVCAAFEHYAKVCYDHFGDKITNWTTFNEPKW FVANGYKIGNYPPGYQDTQKTMIAAYNVMYASALGVKAFKEGGYPGQIGIVHSYTPVN GIDESIETKIAMRYADNYCNNWILDTAALGEFPVDLIAELAKSHDISFMKTDELQTIK QNTVDFIGLNYYSRTLVKPYTGGETQLQFNHSGKKGESKVLIKNWFEQVKDPANETTE WDTEIYPKGLQDGLIEAYERYQLPLYVTENGIGVREDVSVPQVDDAYRIAFMNDHINA IFNAIDAGCDVRGYYAWSPFDLYSWKNGVEKRYGLVAVDFENNQIRKPKASYYWFKEM IESQGKLIKRREF" misc_feature complement(325765..327114) /locus_tag="lmo0300" /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase [Carbohydrate transport and metabolism]; Region: BglB; COG2723" /db_xref="CDD:442035" gene complement(327113..327454) /locus_tag="lmo0301" /db_xref="GeneID:987511" CDS complement(327113..327454) /locus_tag="lmo0301" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS beta-glucoside transporter subunit IIA" /protein_id="NP_463832.1" /db_xref="GeneID:987511" /translation="MTDSNELTTELDSMAIILHAGNAKSCAFEALKEVKLQNIEAFTQ KITEAKDEIKLAHRAHAELLRKLSSENRMREVDLLLVHAEGHLSSTDIAVEMIRELGE IYQWKWSLSNE" misc_feature complement(327137..327430) /locus_tag="lmo0301" /note="PTS_IIA, PTS system, lactose/cellobiose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_lac; cd00215" /db_xref="CDD:238133" misc_feature complement(order(327191..327193,327212..327217, 327266..327268,327428..327430)) /locus_tag="lmo0301" /note="methionine cluster [active]" /db_xref="CDD:238133" misc_feature complement(order(327197..327205,327209..327211, 327383..327385)) /locus_tag="lmo0301" /note="active site" /db_xref="CDD:238133" misc_feature complement(327209..327211) /locus_tag="lmo0301" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:238133" misc_feature complement(327200..327202) /locus_tag="lmo0301" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238133" regulatory complement(327128..327133) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0301" regulatory complement(327462..327467) /regulatory_class="ribosome_binding_site" regulatory 327605..327610 /regulatory_class="ribosome_binding_site" gene 327621..327905 /locus_tag="lmo0302" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987513" CDS 327621..327905 /locus_tag="lmo0302" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0302" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463833.1" /db_xref="GeneID:987513" /translation="MKKTVHGWEIISSLDVRVYQDEAGGVAILVDRDNFGDQVPVLLN FGDDGVDIKALSHLTKSVRVSLDKKVRIEWHDEYFEERTQAMECIEVERD" regulatory 327927..327932 /regulatory_class="ribosome_binding_site" gene 327941..328495 /locus_tag="lmo0303" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987514" CDS 327941..328495 /locus_tag="lmo0303" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="putaive secreted, lysin rich protein" /protein_id="NP_463834.1" /db_xref="GeneID:987514" /translation="MSKKLVSIIFLGICLLLVGCGKEVVDSKYTGKWKLESSGIGMSD GSNYKETDAAGKVSLDLDIDAEGNVKELYIDDAVAITNSYKLKKKGDDEYQYDGTLIS KKVYSYETESDKENVETMLKFLKSKDNVKITKNEQKGDEYHIDVKADEKDFVFSLEMQ SGKLIFKKVDTKEKVLIKETYKKN" regulatory 328561..328601 /regulatory_class="terminator" regulatory 328689..328694 /regulatory_class="ribosome_binding_site" gene 328701..329966 /locus_tag="lmo0304" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987515" CDS 328701..329966 /locus_tag="lmo0304" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0304" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463835.1" /db_xref="GeneID:987515" /translation="MNLVALLKYMQENYGEQRTNYPMAGNEVAKKFKQGVKTAFETTL LGEDYEISASIGTGGWANVPWIAVHDKEISTSVQEGVNLVYLFTNDYQGVYLSLNQGY TYVNKNYKNTKLTLGKIARFWQGNLSTLKSENGFTIDPINLGRKESRYTNLVKGYESC NIYSKYYDIKDLEETDNDLLSQDLLQMLTVFKELKGHLMLDDKKGIEATIDFIINNGT FNELSEKAKSEKIVEIEKKRKLVLGKEETHSRNSVVKEEKVPYITKRDYAKEAIRNTE KGLQGEYLVINYEKERLIKNSITKPYADKINHVAESGDGHGYDIISYDINPDAPNEVI EIYIEVKTTTGNRDAPFYLSDNELNVARIKGELYKIYRVYDYNTVPKLKIIDNLFDET LEIKPINYIVKGVNQNDKHTKNQLPKNTL" misc_feature 328728..329288 /locus_tag="lmo0304" /note="MrcB-like, N-terminal domain; Region: MrcB_N; pfam12102" /db_xref="CDD:432333" misc_feature 329541..329855 /locus_tag="lmo0304" /note="Protein NO VEIN, C-terminal; Region: NOV_C; pfam13020" /db_xref="CDD:463774" regulatory 329909..329914 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0304" gene 329923..330999 /locus_tag="lmo0305" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987517" CDS 329923..330999 /locus_tag="lmo0305" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="L-allo-threonine aldolase" /protein_id="NP_463836.1" /db_xref="GeneID:987517" /translation="MTNTLKTSYQKTPYKLGGNGPRNVGVLTEALQNIDDNLESDIYG NGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIH EQDGLKELQQITPLLLGTANQLLTIDDIKSLREPVSSVLIELPQREIGGQLPAFEELE KISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILA GNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKRIGKMAEYFEAAKGLAERFNSC SGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVS VGDAFAEIPAKNLELVFRCLEKEL" misc_feature 330007..330948 /locus_tag="lmo0305" /note="Threonine aldolase [Amino acid transport and metabolism]; Region: GLY1; COG2008" /db_xref="CDD:441611" regulatory complement(331017..331052) /regulatory_class="terminator" regulatory 331021..331059 /regulatory_class="terminator" gene complement(331063..331446) /locus_tag="lmo0306" /db_xref="GeneID:987520" CDS complement(331063..331446) /locus_tag="lmo0306" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0306" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463837.1" /db_xref="GeneID:987520" /translation="MQHQEQEKNQAFFNEQKEKVTLYLKHNIPDFKTVTFTNEEFNPI GISIDGYINNDKNLSFTAGKDVKIFSCSDELDKMFKEPRKGYDEIIEKEETSLEMPKE KTKTINEILSDLKSYEDQIITQNKI" misc_feature complement(331180..331413) /locus_tag="lmo0306" /note="Protein of unknown function (DUF1433); Region: DUF1433; pfam07252" /db_xref="CDD:284628" regulatory complement(331457..331462) /regulatory_class="ribosome_binding_site" regulatory 331531..331536 /regulatory_class="ribosome_binding_site" gene 331543..332688 /locus_tag="lmo0307" /db_xref="GeneID:987521" CDS 331543..332688 /locus_tag="lmo0307" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0307" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463838.1" /db_xref="GeneID:987521" /translation="MTTKKAFTDEEYFKLSEAVYQDGTLNSKKINIELSDRTKSNWKV VSKLNDRATNTQAFAVIPEEKGKDGKIYYNHNNMIFVYRGTKESKDFGSDIINVFAGK NSRTSLDRKSKNPFQVSKEWTEEVLKEFNPKNPTSTGHSLGGALSHYNSILYDFNATT YAAPNIYQLLPEDKQKKVRDGFYNNSIIDFTHDDDMIGTFDQFSSPIVGSQYIAERNN VKVGVKGVFGAIPGHYNETFEGCFSSDGTMKLKVDVDSIIKHAQDIDNIIQSLQTNND DLENLEEKLQIGSKKIQNQLEEEKRIGGVYSELTTWDIDDVLTELCTKYKNGVYCFYN PNEFEKYYEMNHQTRRLLKNFQIELVDAAQSFRETNTSLGEWISNNN" misc_feature 331744..>332205 /locus_tag="lmo0307" /note="Putative lipase ATG15 (essential for vacuolar disintegration of autophagic bodies) [Intracellular trafficking, secretion, and vesicular transport]; Region: CVT17; COG5153" /db_xref="CDD:444061" gene 332776..333132 /locus_tag="lmo0308" /pseudo /db_xref="GeneID:987522" misc_feature 332776..333132 /locus_tag="lmo0308" /pseudo regulatory 333523..333528 /regulatory_class="ribosome_binding_site" gene 333534..335195 /locus_tag="lmo0309" /db_xref="GeneID:987523" CDS 333534..335195 /locus_tag="lmo0309" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463839.1" /db_xref="GeneID:987523" /translation="MSIINSNFRSLGSYIMENIYKIPNYQREYSWEETELEDLWMDLS QIINGETESHFFGQIVIHVDKKEKAKLIIDGQQRTSTAVIFLAAMRELFTEMYNAGWD DAQFDAQDITTKFIGRYTQTRDERKLILGENDKSYFSNRIQSVSSEQLGLQKATKSQK RINFAYNYFYKKLEEEINSSDFLEDKYGLLKTFFSTFTEKCSVMFVETDDFNEAFIIF ETLNARGKDLETADLLKNHLFKIANKKVGEVKKNWKQMLEFIGTVDTTKYIRHFWNSQ NVFIREKDLYKEIRKKITTQFEAIIFIDDLVRLSEVYGGMKNPAEDNFFETDSQQVLN DLKRLGAKSFYPIILAMVKKDYGPNEIYEVLSAIEVLVVRNFVISGLVANKYETEFSK IAFKIYQEEVESVTEIINLIRTNIIADDVFLNNFSSFKTTNKLRLRYILKKINDSYSK EIAVLNDNNKIHLEHIMPIKADGWDIIKEEHEEYLWKIGNLTLLGSEYNKKSTNKIFN DKKDIYEYSEVQLTRKLLDYDEWNIDVIKERQVELAELAVNIWKV" misc_feature 333543..335192 /locus_tag="lmo0309" /note="DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains [Defense mechanisms]; Region: GmrSD; COG1479" /db_xref="CDD:441088" gene 335350..336426 /locus_tag="lmo0310" /db_xref="GeneID:987524" CDS 335350..336426 /locus_tag="lmo0310" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0310" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463840.1" /db_xref="GeneID:987524" /translation="MANNLKQTLRSGEMYMVRKFFGYIGTRRFNIYEALVYRNRYSLK NKEKLIFYDGTSKIKQKIAPKSGSKNGRSPHFAYYPNSSHDGVGKEMTVTHKAYQEAI STLKIFCIETLDGEVIILEVEEAKLEYYINDEGQYYLVDILIVLKSTYPFYYFYKWEG ILAIEIWVSHKTEQKKIEALNRKGIPTIECKISKKLLLNEDIQSDKEYLTNVQKVINR YSDIKFHLYGRFISDAKIDETSVWGEKYLEFKNYHNEKKRMELHFRKLEKQKLELEKK NKELISENYNLDLEIKNKHTVIEKLSKNKMEVEANKELLKICKIENGNLIKKVSALNF ELVKMKEYKDHPIKTFWKDKIRFK" misc_feature 336139..>336357 /locus_tag="lmo0310" /note="Filament-like plant protein, long coiled-coil; Region: FPP; pfam05911" /db_xref="CDD:461778" regulatory 336529..336534 /regulatory_class="ribosome_binding_site" gene 336541..337161 /locus_tag="lmo0311" /db_xref="GeneID:987525" CDS 336541..337161 /locus_tag="lmo0311" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0311" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463841.1" /db_xref="GeneID:987525" /translation="MGTNRARIDKSIENILKGKNIEEAKLHLPEITSTIKTGFIEKEI SEQVYQSIIGVVSGKLSKIYDLDEDKCKEITSDFIKREQWINEIMELVEQDNVTGISD VLLKALKIALGETVKAEQNETYFVEKLLYEIIFLSLENTMQGALETLEEGITIPQIRK EFIKPLADKLFEEDIKTEIPALVLGKTTLAVINNKIADKLKNFGGF" regulatory 337150..337154 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0311" gene 337161..338363 /locus_tag="lmo0312" /db_xref="GeneID:987527" CDS 337161..338363 /locus_tag="lmo0312" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463842.1" /db_xref="GeneID:987527" /translation="MSEIQHFSEFIDGATNYWYKNKFDRCNACDMVNVMLTVFDGDIS TPGNQSNKIPRRISVSAKVYDVDRWNQSREELIELLNWVSGDLFEMSFEKNEELFDAF PLELPSPRKECITLFSGGLDSFAGSYYNFLNNISSDYVGYVNKAEERTYQKRLQSFYR KIFSAGGSEVDIRNKYQKPKIFYFQSTRSLLYLSLAISKAISNSVKEIRMYENGILSL NPEFGRYTTKTTHPKTIFLYNKLLDTLGYDIRIVNKFEYETKGEIVENMNLEFKSQIK NTFTCGKSRVGKEYNHTGQCGACIPCILRKISLAAYDNEHFDAKYFVGYKNVASASEK YLKDYINNIGYFDAYVEAIKNEEIFGEISNNQHKFHKENNYLRYQKVMFDKFASEYER FIAKYGIH" misc_feature <337854..338096 /locus_tag="lmo0312" /note="Adenine nucleotide alpha hydrolase (AANH) superfamily; Region: AANH_superfamily; cl00292" /db_xref="CDD:469708" gene 338341..339087 /locus_tag="lmo0313" /db_xref="GeneID:987528" CDS 338341..339087 /locus_tag="lmo0313" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463843.1" /db_xref="GeneID:987528" /translation="MRNMGYIDLHVHIDFYSEPIKIAREYERLKIYVIFVTYLPEIFL KTRYEYDNYKYVRLGVGFHPDMVGEYDFDKNAFERGLQYTRYIGEVGLDFSKSNQQFK EQQIEIFQQITSPKYNKGNVYSIHSRKAEVEVLQILKSNNVKSAIFHWYTGGKHMLKD ISDSGYFFSVNHKMLTSKNGIDIIKSIPKSQLLFETDGPFARKEKSIVYPSNFKQIYA DFEEVIPGFEKIVFSNFKRLLFQKDIDKIN" misc_feature 338359..339057 /locus_tag="lmo0313" /note="TatD related DNase; Region: TatD_DNase; pfam01026" /db_xref="CDD:425997" misc_feature order(338368..338370,338374..338376,338716..338718, 338785..338787,338929..338931) /locus_tag="lmo0313" /note="active site" /db_xref="CDD:238635" regulatory 339258..339263 /regulatory_class="ribosome_binding_site" gene 339270..340055 /locus_tag="lmo0314" /db_xref="GeneID:987529" CDS 339270..340055 /locus_tag="lmo0314" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463844.1" /db_xref="GeneID:987529" /translation="MPKLIIDADDFGLSKAINHGIIESYKTGITTSTLLMPNLETAEH AIALAKNHPDLFIGQHTNFLLGKPCANPAEIPSLVDENGEFHRSKYYRANPELKFQYE DVRTETIAQMERFKALTGHYPEHIDCHSIGDETVDQAFFDIAREFGIHTTLKYSGDKK WSDQEGYLPITKLLESGALPYTNGGVSVENFLNDDFGLLKLAPNEIAEMHFDVGFLDQ FVLDNSSYTLMRCRELATICDVRVRDWLLENGFELITFGDLQR" misc_feature 339276..340046 /locus_tag="lmo0314" /note="uncharacterized YdjC-like family proteins from bacteria; Region: YdjC_like_1; cd10805" /db_xref="CDD:212116" misc_feature order(339294..339305,339441..339449,339639..339656, 339903..339905,339957..339959) /locus_tag="lmo0314" /note="YdjC motif; other site" /db_xref="CDD:212116" misc_feature order(339294..339299,339303..339305,339441..339443, 339447..339449,339642..339644,339648..339650, 339654..339656,339903..339905,339957..339959) /locus_tag="lmo0314" /note="putative active site [active]" /db_xref="CDD:212116" misc_feature order(339312..339314,339378..339380,339387..339401, 339510..339515,339519..339521,339585..339587, 339609..339611,339618..339620) /locus_tag="lmo0314" /note="putative homodimer interface [polypeptide binding]; other site" /db_xref="CDD:212116" gene 340086..340191 /locus_tag="lmos15" /db_xref="GeneID:18245184" misc_RNA 340086..340191 /locus_tag="lmos15" /product="TPP" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245184" regulatory 340106..340155 /regulatory_class="terminator" /locus_tag="lmos15" regulatory 340265..340270 /regulatory_class="ribosome_binding_site" gene 340278..340952 /locus_tag="lmo0315" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987530" CDS 340278..340952 /locus_tag="lmo0315" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="thiamin biosynthesis protein" /protein_id="NP_463845.1" /db_xref="GeneID:987530" /translation="MFIHGFQEEVGNLWQETLRHPFVRSLADGTLEKEAFYYYLLQDD YYLSHFEKVIEKSVEQAGTAELAAEMREVQVRLQQSELLMREQFYPRVGLTERDFSER KPAPTAYHYTSHLHRMVDFGSFGVTIAALLPCYALYADIGKMYEGARSSEPFYQELLD SYVDENYQKVVLQQKRLVEQAASMADARELALMKQAFQISVEMEWAFFDMAYKKQNWR GSVNYV" misc_feature 340296..340916 /locus_tag="lmo0315" /note="TenA-like proteins including TenA_C and TenA_E proteins, as well as pyrroloquinoline quinone (PQQ) synthesis protein C; Region: TenA_PqqC-like; cl38925" /db_xref="CDD:393295" regulatory 340932..340937 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0315" gene 340945..341754 /locus_tag="lmo0316" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987532" CDS 340945..341754 /locus_tag="lmo0316" /EC_number="2.7.1.50" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP" /codon_start=1 /transl_table=11 /product="hydroxyethylthiazole kinase" /protein_id="NP_463846.1" /db_xref="GeneID:987532" /translation="MFDFMTLEKVREKGPLVHNITNIVVANDSANGLLAIGASPIMAS AKEEMDELAKMADVLVINIGTLDGELVTAMKIAGRAANVAGTPVVLDPVGVGATSYRR KVVQELLAEIQFAAIRGNAGELAAIAGEAWEAKGVDAGVGSADVLSIAGKVANEWSTV VIISGEVDVISDGTRFAKVANGSALLPRITGSGCLLSAVCGSFIAVQDDAFRASVEAC ASYAVASEYAEMELERKLPGSFRPLFLDALASWSVEKTRAKAKIQESGEHK" misc_feature 340957..341736 /locus_tag="lmo0316" /note="hydroxyethylthiazole kinase; Validated; Region: PRK09355" /db_xref="CDD:236477" misc_feature order(341008..341010,341014..341016,341032..341034, 341044..341046,341062..341064,341068..341070, 341128..341130,341134..341139) /locus_tag="lmo0316" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238575" misc_feature order(341011..341028,341032..341037,341044..341046, 341068..341079,341083..341088,341095..341100, 341134..341145,341242..341247,341503..341514, 341656..341661,341665..341673,341677..341682, 341689..341691) /locus_tag="lmo0316" /note="multimerization interface [polypeptide binding]; other site" /db_xref="CDD:238575" misc_feature order(341215..341217,341296..341298,341302..341304, 341311..341313,341434..341436,341440..341442, 341446..341448,341500..341502,341518..341520, 341524..341526) /locus_tag="lmo0316" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:238575" regulatory 341736..341743 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0316" gene 341751..342554 /locus_tag="lmo0317" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987534" CDS 341751..342554 /locus_tag="lmo0317" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphomethylpyrimidine kinase" /protein_id="NP_463847.1" /db_xref="GeneID:987534" /translation="MTFPQVLTIAGSDSGGGAGIQADIKTFQERRTFGMSVITAITAQ NTLGVKAVHKIPVEMIREQCDAIAEDFQVSAVKTGMLADAEIIREVVRNIRLHNFPNL VIDPVMIAKGGTALLENEATQVLKDELLPLGTIITPNIPEAEEILGEKITTKAEIERA AKKIYDMGVKAVVIKGGHSEMTEAADFYFDGVTAKWLTSERFDTPHTHGTGCTFSACI AAELAKGNSLLDSVMVAKEFISSAIKYPLGIGHGHGPTNHFAYRMEDGK" misc_feature 341808..342530 /locus_tag="lmo0317" /note="Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme transport and metabolism]; Region: ThiD; COG0351" /db_xref="CDD:440120" regulatory 342538..342543 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0317" gene 342551..343195 /gene="thiE" /locus_tag="lmo0318" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987536" CDS 342551..343195 /gene="thiE" /locus_tag="lmo0318" /experiment="EXISTENCE:[PMID:19448609]" /note="Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate" /codon_start=1 /transl_table=11 /product="thiamine-phosphate pyrophosphorylase" /protein_id="NP_463848.1" /db_xref="GeneID:987536" /translation="MRAELAVYFIAGTQDIVRGTLPSVLEEALKGGITCFQYREKGAG SLQTASERKEMALECQKLCAKYQVPFIINDDVALALEIGADGIHVGQTDEAIRQVIAS CSGKMKIGLSVHSVSEAKEAERLGAVDYIGVGPIFPTISKADAEPVSGTAILEEIRRA GITIPIVGIGGINETNSAEVLTAGADGVSVISAITQSDDCHSVIKQLKNPGSPS" misc_feature 342551..343177 /gene="thiE" /locus_tag="lmo0318" /note="thiamine phosphate synthase; Region: thiE; PRK00043" /db_xref="CDD:234590" misc_feature order(342572..342574,342578..342580,342659..342661, 342665..342667,342812..342814,342884..342886, 342938..342940,342944..342946,342965..342967, 342971..342973,343049..343051,343061..343063, 343115..343126) /gene="thiE" /locus_tag="lmo0318" /note="thiamine phosphate binding site [chemical binding]; other site" /db_xref="CDD:238317" misc_feature order(342659..342661,342665..342667,342671..342673, 342767..342772,342827..342829,342884..342886, 342965..342967,342971..342976,343061..343063, 343121..343126) /gene="thiE" /locus_tag="lmo0318" /note="active site" /db_xref="CDD:238317" misc_feature order(342665..342667,342671..342673,342767..342772, 342818..342820,342827..342829,342884..342886, 342974..342976) /gene="thiE" /locus_tag="lmo0318" /note="pyrophosphate binding site [ion binding]; other site" /db_xref="CDD:238317" regulatory complement(343166..343210) /regulatory_class="terminator" gene complement(343221..344636) /locus_tag="lmo0319" /db_xref="GeneID:987537" CDS complement(343221..344636) /locus_tag="lmo0319" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phospho-beta-glucosidase" /protein_id="NP_463849.1" /db_xref="GeneID:987537" /translation="MHTNTGFPADFLWGGAAAANQFEGAYNVDGKGLSVQDVTPKGGF GHITDGPTPDNLKLEGIDFYHRYKDDVKLFAEMGFKVFRTSIAWSRIFPNGDETEPNE AGLQFYDDLFDELLAHNIEPLITLSHYETPLHLSKTYDGWVNRKMIDFYENYVRTVFN RYKGKVKYWLTFNEINSILHAPFMSGGISTSPDKLSQKDLYQAVHHELVASALATKIG HEIMPEAQIGCMVLAMPTYPLTSNPDDIIAVMEAERKNYFFSDVHVRGTYPGYMKRYF RENNIELDVTEEDLEILKNTVDFISFSYYMSTTETADESKRKAGAGNILGGVQNPYLE ASEWGWQIDPQGLRVVLNEFWDRYQKPLFIVENGLGAIDQLEKDENGNYTVNDDYRIN YLSAHLSQVKEAIKDGVDLMGYTSWGCIDLVSASTAEMKKRYGFIYVDRNNDGTGTLN RYKKKSFDWYKNVIATNGEDL" misc_feature complement(343242..344630) /locus_tag="lmo0319" /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase [Carbohydrate transport and metabolism]; Region: BglB; COG2723" /db_xref="CDD:442035" regulatory complement(344644..344649) /regulatory_class="ribosome_binding_site" gene complement(344850..346049) /locus_tag="lmo0320" /db_xref="GeneID:987538" CDS complement(344850..346049) /locus_tag="lmo0320" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan-bound surface protein" /protein_id="NP_463850.1" /db_xref="GeneID:987538" /translation="MNKYFKNLATILFTVSVLTTSIIASPAMASAYEESHNVSTIYTS PLDTPHVGDTKITGKTTPLSSFSIAIYTSEGRLTGTFFGTTNTDGTYSVDLSDFTVYH PSGYVTTGKVIYEENSFVRSGTETGGDKVIKVTVSYDYIQTAINELFLNNNPTGTILT ITDQNAINAVQEQINTVTSSEKESFQEQLNNAQQQLDARIAQEQAAIQAVNQLFLEDS PVNSIKAETTQDLIDQAQTLVDVLPASELKDTLQANIVKAQTELDERSKPVTPPKNDP EPDNPEEPVTPVDPATPIPDEPSTPTDPATPEKPEITTPENPESTVVEADSSENEPEK SADSKIVNNPIQITSQATKTATKQAKSSATKTTLPLPKAGDTETTSSILFGTLMLSSL VLFKRKK" misc_feature complement(344853..346049) /locus_tag="lmo0320" /note="cell invasion LPXTG protein Vip; Region: Vip_LPXTG_Lm; NF033201" /db_xref="CDD:467994" regulatory 346364..346369 /regulatory_class="ribosome_binding_site" gene 346377..347036 /locus_tag="lmo0321" /db_xref="GeneID:987539" CDS 346377..347036 /locus_tag="lmo0321" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463851.1" /db_xref="GeneID:987539" /translation="MGSAFSAILSPAVGILISPFPIVGLILILLSNKARINSIFYTVG WIVGNIAIFFIGLFLMSSAVSSSGDQSTLVKVVLIVLGALLILLGAHDFTKRPKNGEK AATPKWFEKMSNIKPGGAMIFAFVLSAVNPKNMLLSLTAGVSVGALNLSGGQETTATI IFGIIACCSIYVPTIAFLLAGSKLNNVLDSTRKWLIQNNSVIMAVLFLFIGLSVISKA F" misc_feature 346398..347018 /locus_tag="lmo0321" /note="Sap, sulfolipid-1-addressing protein; Region: SfLAP; pfam11139" /db_xref="CDD:431674" regulatory 347207..347212 /regulatory_class="ribosome_binding_site" gene 347219..347611 /locus_tag="lmo0322" /db_xref="GeneID:987554" CDS 347219..347611 /locus_tag="lmo0322" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463852.1" /db_xref="GeneID:987554" /translation="MFDKLMGKAAIVTESSYGIERFLDEDEQIIQIFKFIRDEVIITS KGIFNIDAQGITGKKVEYKFFPKKALKYVSIETAGTLDRDFDLKIGVDGNTVVTQNTS FSAPISLKVHKNDTEMGFALYKMIKGML" misc_feature 347222..347596 /locus_tag="lmo0322" /note="Bacterial PH domain; Region: bPH_1; pfam08000" /db_xref="CDD:462337" regulatory complement(347619..347652) /regulatory_class="terminator" regulatory 347630..347663 /regulatory_class="terminator" gene complement(347658..348428) /locus_tag="lmo0323" /db_xref="GeneID:987557" CDS complement(347658..348428) /locus_tag="lmo0323" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463853.1" /db_xref="GeneID:987557" /translation="MFSVTTFNIRFDDTSERKKSWELRKTLTKSLLDKYQWDFMGVEE PLLPQMRDMKEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPDVP SIHSTAMFPRICVWGKFADSDGKQFYIFNTHLDHISEEARLFASQLLLKKAATIAENS PVIILGDFNTEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPLRPINELEKID YIFVSEEFQVCTYETIVDEVDGFSASDHFPVTANLDWK" misc_feature complement(347670..348422) /locus_tag="lmo0323" /note="Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1; Region: EEP-1; cd09083" /db_xref="CDD:197317" misc_feature complement(order(347691..347696,347775..347777, 347922..347924,347928..347930,348030..348032, 348297..348299,348405..348407)) /locus_tag="lmo0323" /note="putative catalytic site [active]" /db_xref="CDD:197317" misc_feature complement(order(347694..347696,348297..348299)) /locus_tag="lmo0323" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:197317" misc_feature complement(order(347691..347693,347922..347924, 348030..348032)) /locus_tag="lmo0323" /note="putative phosphate binding site [ion binding]; other site" /db_xref="CDD:197317" regulatory complement(348436..348441) /regulatory_class="ribosome_binding_site" regulatory 348571..348576 /regulatory_class="ribosome_binding_site" gene 348586..349065 /locus_tag="lmo0324" /db_xref="GeneID:987558" CDS 348586..349065 /locus_tag="lmo0324" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0324" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463854.1" /db_xref="GeneID:987558" /translation="MRKSRWLLILLLLIVLVALSACEDSGNGDISGAPAKMEKQHFPP TDTKKGWIELLATDGISSQDNLPCVYEEAESVEKLEVHMKELSTASLTYIYIDGHIVQ MEQGGDELSFQIQLSKTELRKGIHELAVVQYQENNPETKKVEFLKRANYEVKQIKND" regulatory 349313..349318 /regulatory_class="ribosome_binding_site" gene 349326..350228 /locus_tag="lmo0325" /db_xref="GeneID:987559" CDS 349326..350228 /locus_tag="lmo0325" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_463855.1" /db_xref="GeneID:987559" /translation="MGSYGELIREIRLSKGLTQKEVYTGIISRSYAIGFEKGKHEITL SLFEEILKRIMVPLDEFFFIYRDFSSTEDDSFWIDFVELSGKNDVVGMQALLDKITLE RTEQSEVRKAILHTRIQTINHYLRTNVFDESNISDEYKKIIHDYLWKMQTWTLEEVRI FSNGISFFEEEVQIHFYQIMLKSYEKYRYYDRGRLLFCHLFANLTDELIIQNKINYAN LVLEKLKEASETSGSFNSAFYRIVANYYQGAIWMKEGEVEKGYRQAKRAIQTWKELHY EAIADLYSVVLKQFLEKENIQVED" misc_feature 349338..349508 /locus_tag="lmo0325" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cd00093" /db_xref="CDD:238045" misc_feature order(349350..349352,349362..349364,349434..349436) /locus_tag="lmo0325" /note="non-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" misc_feature order(349359..349361,349431..349433) /locus_tag="lmo0325" /note="salt bridge [active]" /db_xref="CDD:238045" misc_feature order(349380..349385,349413..349415,349422..349424, 349434..349439) /locus_tag="lmo0325" /note="sequence-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" misc_feature 349512..350204 /locus_tag="lmo0325" /note="transcriptional activator, Rgg/GadR/MutR family, C-terminal domain; Region: RGG_Cterm; TIGR01716" /db_xref="CDD:273772" regulatory 350256..350290 /regulatory_class="terminator" regulatory 350379..350384 /regulatory_class="ribosome_binding_site" gene 350392..351264 /locus_tag="lmo0326" /db_xref="GeneID:987560" CDS 350392..351264 /locus_tag="lmo0326" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_463856.1" /db_xref="GeneID:987560" /translation="MISYGELIRQIRQSKKISQKEVYTGVISKSYAIEFEKGTHAISS LLLEKIVAKLMVSMEEFFLMYHQEALPEKEDFWEAYARTCKTDEASAWESLYQKISLE KGKVNQVKSAAIKLELDHIKGKQVADKKAVQILENYLIEAVFWTLQDIFLFTRMMHYL PLKSRVPFYYKLLNTLDRYRHFERGRSISQSALASIMDDFIEKNEIEYMELMIKSLEK ISEDCDGTYSKILCMYYRGIVRWREGEKREGSEEIEQAVAILRALGYENKAAEYETMY RQFARENNDIKTME" misc_feature 350404..350574 /locus_tag="lmo0326" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cd00093" /db_xref="CDD:238045" misc_feature order(350416..350418,350428..350430,350500..350502) /locus_tag="lmo0326" /note="non-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" misc_feature order(350425..350427,350497..350499) /locus_tag="lmo0326" /note="salt bridge [active]" /db_xref="CDD:238045" misc_feature order(350446..350451,350479..350481,350488..350490, 350500..350505) /locus_tag="lmo0326" /note="sequence-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" misc_feature 350578..351237 /locus_tag="lmo0326" /note="transcriptional activator, Rgg/GadR/MutR family, C-terminal domain; Region: RGG_Cterm; TIGR01716" /db_xref="CDD:273772" regulatory 351263..351306 /regulatory_class="terminator" gene 351459..355505 /locus_tag="lmo0327" /db_xref="GeneID:987561" CDS 351459..355505 /locus_tag="lmo0327" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell surface protein" /protein_id="NP_463857.1" /db_xref="GeneID:987561" /translation="MLKKIFIALIALVVIINTVSFTSVSASTPTWLEQTMNNNEPFIK EIETETGKTRANITQTDLEAITALRVTGASDIPANIDMLTHLTLLKAVQGTISSVPNS VGNLKELKILNLNTNHLSNFPTIVYQLPKLEELQLNDGTIEEIPATITNMASHLKFLT VNNNRLVKVPTIIFSTNWSNSSTGELDLFTTGNQIVTDIPANYVSNFNNGQNMLEFYD GQFQKQDQLTTTPGYTIDVPVGTDFNQLTPDKTKLALTSGRTLLAQHEFEYYDDGSSS LIHNGVAAAPGQATIFIKSKFSTQSNKFARTQVTVNIAALNGGPITVKHEDTKGQELA PPVILNGKDGDPYTTTQKTFPGYTLVATPANQNGAFTLNPATVNYVYSANDYKLTSTF KDAQGQELKAPVVDTKDYHIQDNYTTTAATIPGYSLVSTPANQNGTFGAGNVTVNYVY KKDDYTLTSTYKDTNGQELKAPVVDATTYHYQDTYTTTAAVFPGYTLVATPTNATGTF GSSNITVHYVYQANGYQLTSTFKDQQGKTISPDDVDTKTYHVNDPYTTTAKTIPGYTL VTTPTNNQGNFGTSDITVDYVYKAEDYTLTSTYKDAQGKELKQPVVDSKKYHIQDNYS TSAATIPGYTLVATPANETGTFHTSDVTVNYVYKLTDLKLTSTYKDAQGTELKPPVVD SKTYHIQDNYATTAAVIPGYTLVATPANQSGTFGSTDIQVNYVYQAVAYKLTSTYKDQ QGNDLALPKVDTKTYHIQDGYTTSDIAIPGYTLVAAPTNQTGTFGASDVTVNYVYKAN DYTLTSTYKDAQGKELKTPVIDSQKYHINDTYTTTGATIPGYTLVAAPANQSGTFGAA NVTVNYVYKADDYTLTSTYKDANGKELKAPVVDSKTYHTKDNYSTSAATIPGYTLVAA PANQTGTFNTSNVTVNYFYKANEYTLTSTFKNVQGTELKPAIVKKGFIIKDGYSTSGV TIPGYTLVATPSNKKGTFGASNVTVNYVYKANGYALITTYKDTQGKDLKPLAIDTKTY NINDPYTATALNIPGYTLTTTPANEKGVFGASDETVNYVYKANDYTLTTTYKDANGKE LQAPKVDAKTYHIQDTYKTTAAVIPGYTLVAIPKNDQGTFGANNVTVNYVYQTNDYTL TATFKDAQGNELKATEVDAQKYHIHDTYTSKAAVIPGYTLEKTPTNETGTFNASDIQV NYVYKANDYQLTSTFKDQQGNEIALPTVDAKTYHIHEAYTTKARLIPGYSLVAAPKNQ IGAFGTSDVTVNYVYKKDAIIKPITPAKPTILTIKTPASKVIKTKVVKQTLPKTGDDD AGLLNLLRLIGLVLILGVFLAVGSKKLR" misc_feature 351546..351626 /locus_tag="lmo0327" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature <351636..>352058 /locus_tag="lmo0327" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 351723..351782 /locus_tag="lmo0327" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 351783..351851 /locus_tag="lmo0327" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 351852..351923 /locus_tag="lmo0327" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 351924..352004 /locus_tag="lmo0327" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 352422..352601 /locus_tag="lmo0327" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 352623..352811 /locus_tag="lmo0327" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 352830..353018 /locus_tag="lmo0327" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 353037..353225 /locus_tag="lmo0327" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 353244..353432 /locus_tag="lmo0327" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 353451..353639 /locus_tag="lmo0327" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 353658..353846 /locus_tag="lmo0327" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 353865..354053 /locus_tag="lmo0327" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 354072..354260 /locus_tag="lmo0327" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 354279..354464 /locus_tag="lmo0327" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 354492..354671 /locus_tag="lmo0327" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 354690..354878 /locus_tag="lmo0327" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 354897..355085 /locus_tag="lmo0327" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 355104..355292 /locus_tag="lmo0327" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" regulatory 355524..355560 /regulatory_class="terminator" regulatory 355630..355635 /regulatory_class="ribosome_binding_site" gene 355643..356323 /locus_tag="lmo0328" /db_xref="GeneID:987562" CDS 355643..356323 /locus_tag="lmo0328" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0328" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463858.1" /db_xref="GeneID:987562" /translation="MLEKKYQIHLQNHYDATSRQVQKKEIKVLKKRKNLLIGEVFPYQ ICLESTMEYSRFMLWFEKEVQKIVKELWNQHFIIKLTLSQLHFRETILFLEHLKDFSK RITIEFIGEDTPEIKKHFSVQEQEAFFIGKLRMLKKWKFIISKHIEGCSVEQTLAFTP CLHEIKYTMSQQARMEENIIDLHMFIDFWEYWAIHKKLKFVVEVKEADFITKSLMHKK VHVQFENA" regulatory 356554..356559 /regulatory_class="ribosome_binding_site" gene 356567..356872 /locus_tag="lmo0329" /db_xref="GeneID:987563" CDS 356567..356872 /locus_tag="lmo0329" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_463859.1" /db_xref="GeneID:987563" /translation="MSTRVMYPAEIKEKAIKMKLAGKSTKEIMRTLNIKNPTQVKTWW RWYRNEETHRFHQGVGKQYKYQKGVPELPEIEQLKIALRQKELELEILKKYKALERK" misc_feature 356600..>356716 /locus_tag="lmo0329" /note="Helix-turn-helix domain; Region: HTH_28; pfam13518" /db_xref="CDD:463908" gene 356890..357705 /locus_tag="lmo0330" /db_xref="GeneID:987564" CDS 356890..357705 /locus_tag="lmo0330" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_463860.1" /db_xref="GeneID:987564" /translation="MLVEELKTKYLVKDICQILQVPLSTYYRWKKKDFSQSSLEKKIG QLCKAYQFTYGYRKIAALMKQEEQVGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQT ENHLNRNFQASQPLEKLTTDITYLYFGDCRLYLSSIMDLYNGEIVAYSIGEKQDTELV LDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHS SLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA" misc_feature <356893..357690 /locus_tag="lmo0330" /note="IS3 family transposase; Region: transpos_IS3; NF033516" /db_xref="CDD:468052" misc_RNA 357516..357618 /locus_tag="lmo0330" /product="rli25" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987564" regulatory complement(357650..357704) /regulatory_class="terminator" gene complement(357775..359676) /locus_tag="lmo0331" /db_xref="GeneID:987566" CDS complement(357775..359676) /locus_tag="lmo0331" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_463861.1" /db_xref="GeneID:987566" /translation="MKLSKILTIIVLSATVTSSLPIPMVKAESTTANEMKTENQLLKT DLKETPKEKTPNNNLKNQLVQAGTKTYNDYFPDDNLAKEVAETMNKNADESVTVEELA KVTKLDARSQGIEDSTGIEYLTGLEVLNLEDNQLKSIDVSKNLNLKELTCSNNPLANL DVSKNLALEELTCENNELTQLDVSQNTALEYLYCPRNQLTKLDVSKNSALRYLACDVN QLTNLDVSKNPALTNLGCTKNQLTDLDVSQNPNLGTLVCSDNQLTNLDVSQNQALENL ACDNNELKNIDINQALSLKELSCENNQLTNLDTTQNLALEILYCDDNQLTDLDVRKNV NLLILFCNNNQLTNLAVGETIAKVRCNNNQLKDVSSLPDYFTDDNDDYQAMDQTLVSP TQTTQNNTLVYAVPTDLLDKDGNIVSIIKPDNGGIYDAATRTITWENLPDNGEVSYTF ENEDYGRFSGRVTVPYTGKETISISSDDEISYKEGTTKTEAAFLADIHASVTPATETI TSNFADVVDFQTPGKYVVTLSVAGSDVTKDVIVYVTAEPSEDNPVAPTPPKDKDDTDV NNEQSPGNDKDGTDVNSGKSTDKQPVKVVEKQLPKTGDITSLSLSLAGIVCLSFGILF FIKRKKKTV" misc_feature complement(358315..359442) /locus_tag="lmo0331" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature complement(359239..359301) /locus_tag="lmo0331" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(359176..359238) /locus_tag="lmo0331" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(359113..359175) /locus_tag="lmo0331" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(359050..359112) /locus_tag="lmo0331" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(358924..359049) /locus_tag="lmo0331" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(358861..358923) /locus_tag="lmo0331" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(358798..358860) /locus_tag="lmo0331" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(358735..358797) /locus_tag="lmo0331" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(358597..358671) /locus_tag="lmo0331" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(358048..358257) /locus_tag="lmo0331" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature complement(357787..>358047) /locus_tag="lmo0331" /note="pullulanase, extracellular, Gram-positive; Region: pullulan_Gpos; TIGR02102" /db_xref="CDD:273973" misc_feature complement(357784..357885) /locus_tag="lmo0331" /note="LPXTG-motif cell wall anchor domain; Region: LPXTG_anchor; TIGR01167" /db_xref="CDD:273478" regulatory 360158..360163 /regulatory_class="ribosome_binding_site" gene 360172..360507 /locus_tag="lmo0332" /db_xref="GeneID:987567" CDS 360172..360507 /locus_tag="lmo0332" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0332" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463862.1" /db_xref="GeneID:987567" /translation="MIYYICALYTFISALVSFGFSLDALLKSRKVNGDALINAKYAVS RSLSLLIVALGLFIFKSDAFLVALSLVMIGAQLFDGIIGIKISTFKTVGPLLTAVGNV IMLILFLTI" regulatory 360565..360584 /regulatory_class="terminator" gene 360936..366272 /locus_tag="lmo0333" /db_xref="GeneID:987568" CDS 360936..366272 /locus_tag="lmo0333" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_463863.1" /db_xref="GeneID:987568" /translation="MKKKFSIVIISVLLLGYLAPFDTLLVGADETTVSEDTAVKTAEA DSATEGIESETGSDDETAEEPKEAKEAEASKETTEKEEKAKTEEPASNIKTEINTDKS QLKQTSLKAAVPAGSTYNSLFPDDNLAKKLAVIITGNAAATGNESVDSAALLAISQLD LSGETGNDPTDISNIEGLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLV NLSGVEDLVNLQELNVSANKALEDISQVASLPVLKEISAQGCNIKTLELKNPAGAVLP ELETFYLQENDLTNLTSLAKLPKLKNLYIKGNASLKSLETLNGATKLQLIDASNCTDL ETLGDISGLSELEMIQLSGCSKLKEITSLKNLPNLVNITADSCAIEDLGTLNNLPKLQ TLVLSDNENLTNITAITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLDLKENQITSIS EITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINIS NNVIRTVGKMTELPSLKEFYAQNNSISDISMIHDMPNLRKVDASNNLITNIGTFDNLP KLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPS LAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYLNYTGTEGNLSSLSD LTNLTELNLRNNVYIDDISGLSTLSRLIYLNLDSNKIEDISALSNLTNLQELTLENNK IENISALSDLENLNKLVVSKNKIIDISPVANMVNRGAIVTASNQTYTLPTVLSYQSSF TIDNPVIWYDGTLLAPSSIGNSGNYKDGKITWTNMTATSSSTLFNFNRLKDGLTFSGT VTQPYKSAAKVTADAEQTYTIGDTISEEQFLKDVNAKSSDGAPVTSDFATVVDLNTFG EYEVTLTSEKDGIQGDSCKVIVKVLHGAPVISADQTISYDKHATITEKQFLEDIHAST DLDTAITTNFSTAVNLNKGGDYTVALNSENEDGVKAETVYVTVTVNKDPAPIISAKTE ITYDKFSKKTEAAFLDDIDADTNDGSIVTSNFATAVNLDKAGDYTVTLNSINSDGVAG TPTAIIVHVEKEKIATISTNTAQQYEKYAKINETQFLKDVHASINASPTTAVLESDFE TVVKLDVPGTYTVTITATNEDGGVSAPKEVSVIVRKIPAPEITADKEITYPKFDEVSE AEFLNDIHATISDKNVAITSNFSTDVNLNKAGDYTVTLNATNEDGVKATPVEVIVHVQ QGERPVITADATISYDKFANITEAKFLEDIHATSSDGQSSTVITSNFQTATNFKTAMS YTVTLNAVNEDGISAEPVAVTVTINKEPAAALKADAEVSYAKNEAVTESDFFKDVHLE GTEAPSTAKATSNFDSVVDRSKTGDYTVTINATNEDGAVSTPIEVIVHIEAESAPVIT ANAEVKYNKHEQTDERRFLYDSEAKIDEANVEIKTDFAEKVDINKVGTYTVTLTATNE DGQAANPVEVSVIVSDAAAEKVNVKYVDENGSEISAAETLTGNLDETFSIDAKSIAGY KCDATLSGVFSTVEQTVVFHYKAIKPGVVTIKYEDTNGKAVDEDKQITGEVGDDFEAE AQTVSGYSCRAIASGKITEEPQTITFTYSTATPSKKSGEITVQYVDESGKKLADSKKV TGNIDDSYSVEAKAIEGYSVVGDDSAKGVFTEKSQTVTFKYKKNTQVSKDDPKVKGKT NQPSSTDTKLKVDNNSLPATGDTENMILAVLIGFNMLIVASIFLFRKPKTNQ" misc_feature 361410..361484 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 361449..361892 /locus_tag="lmo0333" /note="protein phosphatase 1 regulatory subunit 42; Region: PPP1R42; cl42388" /db_xref="CDD:455733" misc_feature 361485..361550 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 361620..361766 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 361767..361832 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 361824..363056 /locus_tag="lmo0333" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 361833..361901 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 361902..361970 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 361971..362039 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 362040..362105 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 362106..362174 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 362175..362240 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 362241..362306 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 362307..362372 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 362373..362438 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 362439..362504 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 362505..362570 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 362571..362636 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 362637..362768 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 362769..362837 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 362838..362906 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 362859..>363260 /locus_tag="lmo0333" /note="protein phosphatase 1 regulatory subunit 42; Region: PPP1R42; cl42388" /db_xref="CDD:455733" misc_feature 362907..362990 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 362991..363059 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 363060..363125 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 363126..363191 /locus_tag="lmo0333" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 363360..363521 /locus_tag="lmo0333" /note="LRR adjacent; Region: LRR_adjacent; pfam08191" /db_xref="CDD:369739" misc_feature 363534..363749 /locus_tag="lmo0333" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature 363762..363986 /locus_tag="lmo0333" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature 364002..364226 /locus_tag="lmo0333" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature 364149..364397 /locus_tag="lmo0333" /note="LapB C-terminal region repeat; Region: LapB_rpt_80; NF033932" /db_xref="CDD:468252" misc_feature 364491..364718 /locus_tag="lmo0333" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature 364641..364889 /locus_tag="lmo0333" /note="LapB C-terminal region repeat; Region: LapB_rpt_80; NF033932" /db_xref="CDD:468252" misc_feature 364893..365138 /locus_tag="lmo0333" /note="LapB C-terminal region repeat; Region: LapB_rpt_80; NF033932" /db_xref="CDD:468252" misc_feature 365139..365381 /locus_tag="lmo0333" /note="LapB C-terminal region repeat; Region: LapB_rpt_80; NF033932" /db_xref="CDD:468252" misc_feature 365382..>365540 /locus_tag="lmo0333" /note="LapB C-terminal region repeat; Region: LapB_rpt_80; NF033932" /db_xref="CDD:468252" misc_feature 365484..365657 /locus_tag="lmo0333" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 365679..365849 /locus_tag="lmo0333" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 365886..366065 /locus_tag="lmo0333" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 366159..366260 /locus_tag="lmo0333" /note="LPXTG-motif cell wall anchor domain; Region: LPXTG_anchor; TIGR01167" /db_xref="CDD:273478" regulatory 366491..366496 /regulatory_class="ribosome_binding_site" gene 366508..367032 /locus_tag="lmo0334" /db_xref="GeneID:987569" CDS 366508..367032 /locus_tag="lmo0334" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0334" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463864.1" /db_xref="GeneID:987569" /translation="MNKIIIYSSQYGTSKQYATELSQKKAIPMYSVESIPESIVEADE IIYVGSIYMGKVLGFDKFSKKYKTLSSKLIVISAGMYDPTRKENTDNIELTVKENLQK TNFLLKDIFCLKGKLDTQQLRLKHKILVNALYKSAKRKKESDLNDNERDIVRAYEDDS QIDLNKLDGVLDRL" misc_feature 366517..366939 /locus_tag="lmo0334" /note="Flavodoxin domain; Region: Flavodoxin_5; pfam12724" /db_xref="CDD:463681" regulatory 367235..367240 /regulatory_class="ribosome_binding_site" gene 367248..367532 /locus_tag="lmo0335" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987570" CDS 367248..367532 /locus_tag="lmo0335" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0335" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463865.1" /db_xref="GeneID:987570" /translation="MREIKVDERTFQQHATKLASESTGSYLPLKNGNMAYSKANSIDQ LRSALIELVDVVEDFQHVTKKDASRLKKMGIAYAKQDQLMGQKINQLEVR" misc_feature 367248..367514 /locus_tag="lmo0335" /note="Protein of unknown function (DUF3130; Region: DUF3130; pfam11328" /db_xref="CDD:288220" regulatory 367519..367524 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0335" gene 367533..367901 /locus_tag="lmo0336" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987572" CDS 367533..367901 /locus_tag="lmo0336" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0336" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463866.1" /db_xref="GeneID:987572" /translation="MDSAHSQLEQQLQQIKKAKITAETDADQTRRKQNEQDWLEEDSN QLTQEKRVLLDFLRSGWQGEEASSFHRYLEEQQHEESQVWRRDLQDKRSDLDTELQEN KDRLHTLEAKQATLQKEWSQ" regulatory 367885..367890 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0336" gene 367898..369373 /locus_tag="lmo0337" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987574" CDS 367898..369373 /locus_tag="lmo0337" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0337" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463867.1" /db_xref="GeneID:987574" /translation="MSRIDIAELNDFLHGLRSSNAEAKAMIRKIKEAAMDYAQDNRLK GEAVSTSKQYFSSTYTSICQSIIEALDESEERLAQYIREFGSQVDSSPSARIDAEILQ EAMAKVSQLQRKEEDLHRQLTAPNTKPDMQQVYAVKSRSVHTQLLKAIEQENILEKYL AFEQSHGQFFSALDELIRATARAVQELLHHVSFNDKTGTYSVPKSAANSLLLMKKARD KARKENDKDPYPKAFEDYTVLAYTYVNDQGETVTMWLLEKDGKRVENKELQDFLEKHG QELDPLLYTNLSGEELERKVNDSWKEGINYLNGQKVSGVSGATLRSSAYVASMKDWTD DAGLTDMALGLGFGIAAARNKPVIKEKLNPAETKQTVNGEKWNNYFKEKYGAGNVQWK PSSFEDIIINPERLYGSTKKEVRQMLGEGWKEETYGSAGNGWKFTNEGDGMVFYHPGE GIHKGSYYGFSSGDTGKVKIVGKDYIDFSKDKATIIKFGGE" misc_feature 367901..368497 /locus_tag="lmo0337" /note="LXG domain of WXG superfamily; Region: LXG; pfam04740" /db_xref="CDD:428100" regulatory 369362..369368 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0337" gene 369377..369757 /locus_tag="lmo0338" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987576" CDS 369377..369757 /locus_tag="lmo0338" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0338" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463868.1" /db_xref="GeneID:987576" /translation="MKKLTVGGKFDWYIDTLEKSGMFILELSNEEIETFIFEDFIVGV TSFFSKNNLSELKANEIIDEDMEKNAYLLREKVLKIDNTDLWNINSVRQSSEWLDIFR RSDELKRQLKERWSDEEIEYLKTL" regulatory 370019..370024 /regulatory_class="ribosome_binding_site" gene 370032..370403 /locus_tag="lmo0339" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987577" CDS 370032..370403 /locus_tag="lmo0339" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463869.1" /db_xref="GeneID:987577" /translation="MVSRKQSIQKTQLSKTKKQTLNVTIDRPIGYTDKFGNVYPLNYG FVEGVIGGDGEEQDVYVLSRKISEPIDTFQGDLIAVITRNDDVEDKWVVAAPNENFTI EEIREKVHFIEQYFDSEIKLI" misc_feature <370098..>370376 /locus_tag="lmo0339" /note="Inorganic pyrophosphatase [Energy production and conversion]; Region: Ppa; COG0221" /db_xref="CDD:439991" regulatory 370402..370407 /regulatory_class="ribosome_binding_site" gene 370416..370634 /locus_tag="lmo0340" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987578" CDS 370416..370634 /locus_tag="lmo0340" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0340" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463870.1" /db_xref="GeneID:987578" /translation="MQPPKKEAEKMDERFEKIYTQGKLNIMEIWVDKETGVQYVYHFA GYAGGMSPLLDVDGKPLLADLSKLNGAE" misc_feature 370455..370601 /locus_tag="lmo0340" /note="Family of unknown function (DUF6440); Region: DUF6440; pfam20037" /db_xref="CDD:466268" regulatory complement(370671..370715) /regulatory_class="terminator" regulatory 370682..370726 /regulatory_class="terminator" gene complement(370732..371064) /locus_tag="lmo0341" /db_xref="GeneID:987581" CDS complement(370732..371064) /locus_tag="lmo0341" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0341" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463871.1" /db_xref="GeneID:987581" /translation="MKKNTPEALIDLFEELKNLFETDTSLNNQNSSRLQEILTTATIR VRKASQTVELEARSVFQNIHTLCFVEKIHLNPEEANVLKEIEKIALSKGFWGGMNTLN VTNQFPSN" misc_feature complement(370810..371025) /locus_tag="lmo0341" /note="Enterocin A Immunity; Region: EntA_Immun; pfam08951" /db_xref="CDD:430340" regulatory complement(371074..371079) /regulatory_class="ribosome_binding_site" gene complement(371130..373127) /locus_tag="lmo0342" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987582" CDS complement(371130..373127) /locus_tag="lmo0342" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transketolase" /protein_id="NP_463872.1" /db_xref="GeneID:987582" /translation="MSRIDEQMVNSIRVLSMDMIEKANSGHPGLPMGAAPMAFSLWKN HLKFNPEHPTWFNRDRFVLSAGHGSAMLYSLLHLFGYDLPMSELKNFRQTGSKTPGHP EFGHTVGVDATTGPLGQGFAMGVGMAMAEAHLGAKFNQPEFPVVDHNTYVLCGDGCLM EGISYEAASLAGHLKLGKLVVLYDSNDISLDGDLNESFSEDIELRFRAAGWQTLRVDD GNDLDALDAAIHLAKTEKSRPTLIEVKTVIGYGSPGKAGKSAAHGSPLGEKELKLAKE AYDWQMPPFELPKTVENQKEFYHSKGRASESSWLRTFNAYKQKYPALAESLQHLMDDN LTADWDAELPVFDENADKPVATREVSGIILQELEKKLPNLFGGAADLASSNKTHLKAS ERFAPGNYAAKNISFGVREFAMGAAVNGMTLHGGVQAFGATFFVFSDYLRSAIRSAAL MGIPSTFIMTHDSIAVGEDGPTHEPIEHLASFRAMPGLHVIRPADGNETVEAYRFAFT QKEQPTMLVLSRQNLPILPNSAAKAKTGLAKGAYILADSPLDKLDIILLASGSEVHLM TAVRDNLAKKGFGARVVSMPSFDLFDKQSPEYKESILPKAVKKRFAAEMGASYGWHKY LGDSGEILAIDSFGMSGPGDELAERFGFTVENLTELALKQL" misc_feature complement(371133..373118) /locus_tag="lmo0342" /note="Transketolase [Carbohydrate transport and metabolism]; Region: TktA; COG0021" /db_xref="CDD:439792" gene complement(373129..373785) /locus_tag="lmo0343" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987583" CDS complement(373129..373785) /locus_tag="lmo0343" /EC_number="2.2.1.2" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="translaldolase" /protein_id="NP_463873.1" /db_xref="GeneID:987583" /translation="MKFFLDTASVSEIKRISELGLVDGVTTNPTIIAKEGRPFEEVIK EICSIVDGPVSAEVIGLEADKMVEEARILAKWAPNVVVKIPMTEEGLKAVHTLTAEGI KTNVTLIFTVSQGLMAAKAGATYISPFLGRLDDIGTDGMILIKNLKKVLDNYGLKAEI ISASIRHIGHLEEAAEAGAHIATIPGSLFPKLWSHPLTDKGIEGFLKDWEAFSQKEGN " misc_feature complement(373153..373785) /locus_tag="lmo0343" /note="Transaldolase/fructose-6-phosphate aldolase [Carbohydrate transport and metabolism]; Region: TalA; COG0176" /db_xref="CDD:439946" regulatory complement(373136..373141) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0343" regulatory complement(373795..373800) /regulatory_class="ribosome_binding_site" gene complement(373832..374596) /locus_tag="lmo0344" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987585" CDS complement(373832..374596) /locus_tag="lmo0344" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="short chain dehydrogenase" /protein_id="NP_463874.1" /db_xref="GeneID:987585" /translation="MTFKGFDKDFNITDKVAVVTGAASGIGKAMAELFSEKGAYVVLL DIKEDVKDVAAKINPSRTLALQVDITKKENIEKVVAEIKKVYPKIDILANSAGVALLE KAEDLPEEYWDKTMELNLKGSFLMAQIIGREMIATGGGKIVNMASQASVIALDKHVAY CASKAAIVSMTQVLAMEWAPYNINVNAISPTVILTELGKKAWAGQVGEDMKKLIPAGR FGYPEEVAACALFLVSDAASLITGENLIIDGGYTIK" misc_feature complement(373835..374596) /locus_tag="lmo0344" /note="short chain dehydrogenase; Provisional; Region: PRK06841" /db_xref="CDD:180723" regulatory complement(374606..374611) /regulatory_class="ribosome_binding_site" gene complement(374621..375067) /locus_tag="lmo0345" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987586" CDS complement(374621..375067) /locus_tag="lmo0345" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar-phosphate isomerase" /protein_id="NP_463875.1" /db_xref="GeneID:987586" /translation="MKIAIGCDEMGYELKQTLITRLKEKNIEFTDFGSFEDEKVLYPS IAEKVALEVKNNDYDRGILICGTGIGMAITANKIHGIRAAQIHDSYSAERARKSNDAH IMTMGALVIGPSLAVSLLDTWLDSDFSGGRSQAKVDLMEEIDQKNR" misc_feature complement(374624..375067) /locus_tag="lmo0345" /note="Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]; Region: RpiB; COG0698" /db_xref="CDD:440462" gene complement(375074..375838) /locus_tag="lmo0346" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987587" CDS complement(375074..375838) /locus_tag="lmo0346" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="triosephosphate isomerase" /protein_id="NP_463876.1" /db_xref="GeneID:987587" /translation="MRKPLVGINMKNYINTRAQTSEWLEATIPLLGNFSDVDTFIFPS MGTLETTANLLAGTSFGFGPQNMAPEKSGPLTGEFSVESIIDLSANYVEIGHAERKNL FHEKTSEIAKKIQLALDEKITPVVCVGEGIRANDTNELKNALKKQIEALFDTIQVTQF KNVVLAYEPEWAIGKANSADTDYIESAHQALREIIRELGGDETLVRIIYGGSVSKENA AEIVRQKNVDGLFVGRFGHKPQNFADIVSIVSKTKG" misc_feature complement(375098..375829) /locus_tag="lmo0346" /note="Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually...; Region: TIM; cd00311" /db_xref="CDD:238190" misc_feature complement(order(375137..375142,375146..375148, 375203..375205,375317..375319,375335..375337, 375551..375553,375806..375808,375812..375814)) /locus_tag="lmo0346" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238190" misc_feature complement(order(375542..375547,375578..375583, 375590..375592,375644..375646,375683..375685, 375692..375694,375698..375706,375803..375805, 375812..375814)) /locus_tag="lmo0346" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238190" misc_feature complement(order(375335..375337,375551..375553, 375806..375808)) /locus_tag="lmo0346" /note="catalytic triad [active]" /db_xref="CDD:238190" regulatory complement(375075..375080) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0346" gene complement(375842..376492) /locus_tag="lmo0347" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987589" CDS complement(375842..376492) /locus_tag="lmo0347" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase" /protein_id="NP_463877.1" /db_xref="GeneID:987589" /translation="MSELVMDSAFFGHVLQDMGALIEKERDYLTGLDSDIGDGDHGIN LSIGFREVNKQLDELLAVSPDIATLLKKSGMILLGKVGGASGPLYGSFFMKCGADIPG KTEVNFDELCGMIINGAAAVQHRGKAELGDKTMMDAFLPGVEVLQNRDANAEPIETFS TFVDAMHAGAQSTIPLIAKKGRALRLGERAIGHLDPGSESSWMLMNIILENLKKAV" misc_feature complement(375878..376450) /locus_tag="lmo0347" /note="dihydroxyacetone kinase; Provisional; Region: PRK14479; cl29418" /db_xref="CDD:475197" regulatory complement(375847..375852) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0347" regulatory complement(376500..376505) /regulatory_class="ribosome_binding_site" gene complement(376514..377509) /locus_tag="lmo0348" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987591" CDS complement(376514..377509) /locus_tag="lmo0348" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase" /protein_id="NP_463878.1" /db_xref="GeneID:987591" /translation="MRRLVNDGYEAVEEMLAGYVAAQGKYVDFAENDKRVIVSKQMSE EPRVRIIVGGGSGHEPLFLGYVGKDFADAAVVGNINTSPSPEPCYNAVKAVDSGKGCL YMYGNYAGDVMNFDMGAEMAADDGIRVETVLVTDDIYSAEKVEDRRGVAGDLIVFKAA ASAAAKGLDLDAVKQAAEKANANTFSMGVALSSSTLPVTGKAIFEMKEGEMEVGMGIH GEPGIKRTSIEPADKVVDQIMGYLIEEMKLTSDEEVHVLINGLGGLPVMDQYICYRRV DEILKEKGVHIHNPLVGNYATSMDMIGMSITLVRLDDELKDLLDTPCDTPYFKVD" misc_feature complement(376529..377461) /locus_tag="lmo0348" /note="Dak1 domain; Region: Dak1; pfam02733" /db_xref="CDD:460667" regulatory complement(377517..377522) /regulatory_class="ribosome_binding_site" gene complement(377531..377872) /locus_tag="lmo0349" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987592" CDS complement(377531..377872) /locus_tag="lmo0349" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0349" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463879.1" /db_xref="GeneID:987592" /translation="MSIGIALATIAGGFLFPFAIRMMWGKMVDEWGAIGGWMAAAFIV GTVWTINHGIPKSMIYQSGTVWVDMAVAAGIGVFTASLLTGGKFSKSIVNLAAAVVGG VVGGFLLSLFL" gene complement(377888..378319) /locus_tag="lmo0350" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987593" CDS complement(377888..378319) /locus_tag="lmo0350" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0350" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463880.1" /db_xref="GeneID:987593" /translation="MKFFRGMIGFCIAGMIVMSVWTPLAENYGIFGGYLAAFIIIGPM WFMNHYVGLIENDEDAAFVDMAVGIGICGIMRDVFMQGGGELVSSLPTIGLVAIGAVL AGIVAAAIEKDMAKKQEAKQEKTEPGMNMKEEERLNENQLV" regulatory complement(378325..378330) /regulatory_class="ribosome_binding_site" gene complement(378404..378781) /locus_tag="lmo0351" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987594" CDS complement(378404..378781) /locus_tag="lmo0351" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphotransferase mannnose-specific family component IIA" /protein_id="NP_463881.1" /db_xref="GeneID:987594" /translation="MISIVLVSHSQKITEGLQEMIVEMVGDTVHIISSGGTGDGRLGT NAIMIADNIATCTNSEHIYIFCDIGSAILSAETALELLDTDLLEKTTIIDAPLVEGAF TAAVQSLVNPSKEAILQELTNVH" misc_feature complement(378407..378778) /locus_tag="lmo0351" /note="dihydroxyacetone kinase, phosphotransfer subunit; Region: dha_pts; TIGR02364" /db_xref="CDD:131417" gene 378964..379728 /locus_tag="lmo0352" /db_xref="GeneID:987595" CDS 378964..379728 /locus_tag="lmo0352" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DeoR family transcriptional regulator" /protein_id="NP_463882.1" /db_xref="GeneID:987595" /translation="MFPFERQNKIIHLLDQNSKITVPELSRILDVSISTIRNDLSSLE ESGMIKKVHGGAVLLKSEEKFTNFNDRIIRNIEEKEAIAKEAATLVKNNQTIILDASS TALALAKELHGFSRLTVITSGLYTAIELKDNPNISVILTGGIVTTNSFTLEGILGANL IENIHADLCFMSAKGFTMEEGLTDFNIYETELKRLLAKRTNKLIALLDHTKMGVISTA SITSAENIDLLITDNKINKALYKKFQDAGLPVKVAE" misc_feature 378964..379725 /locus_tag="lmo0352" /note="DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family [Transcription, Carbohydrate transport and metabolism]; Region: GlpR; COG1349" /db_xref="CDD:440960" regulatory 379742..379780 /regulatory_class="terminator" regulatory 379781..379786 /regulatory_class="ribosome_binding_site" gene 379794..380207 /locus_tag="lmo0353" /db_xref="GeneID:987596" CDS 379794..380207 /locus_tag="lmo0353" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463883.1" /db_xref="GeneID:987596" /translation="MDYVITTELPSAEEFVQLRVDAGLSFRAIEASRKALLKSVYFVG LRSKENGKLIGMGRLVGDGIMFIVSDIAVFPSFQGKGFGKVIMTHIKDYIEANLDKTA CVTLLADVPAHGLYKQFGFRESAPASIGMIYQVGN" misc_feature <379935..380156 /locus_tag="lmo0353" /note="Acetyltransferase (GNAT) family; Region: Acetyltransf_1; pfam00583" /db_xref="CDD:395465" misc_feature order(380004..380012,380040..380045) /locus_tag="lmo0353" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" regulatory complement(380203..380237) /regulatory_class="terminator" regulatory 380214..380248 /regulatory_class="terminator" gene complement(380253..381779) /locus_tag="lmo0354" /db_xref="GeneID:987600" CDS complement(380253..381779) /locus_tag="lmo0354" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="fatty-acid--CoA ligase" /protein_id="NP_463884.1" /db_xref="GeneID:987600" /translation="MTIKKYEPLNLYTNFKKSAERYPEMPIHFDEELVTFPELGLHST YKKCEEAIIQKAAHLHKFGVRKEEKVIVYKSAKFDSYILAVAISYIGAVPIMVSPHLP ASTIDIFVNRLDQPWLLFDSETSDKSHQLNNLPDSRLINAEQLFKAPLDGYTCEQEEL PKDMIAYMTHTSGTTGVPKLIAHSANSMGWRTKYQRRILNFIKPRGLVAFHISPVHSR FNIGVSSLMSLGFPLLPIANPSKANVEKVLREYKPYVLETHPNHFVQWASLAREKPDV FQSIKFYHSTFDAINKETMAVFLRTSEYKKPLFLQIYGQSECGPMILRGHTLQSIETL NARDMGIGVPGLTEVRIVDQDGNPVPAGVSGNIQMLSKGRALTYYKEEARFEENVYGP WWDSGDYGMKDEKGRLFLQDRQVDLVETIDSTLAIEDKLLDTLTFLDEVVIIRGENGS PQPIIAVHNDGEMNWDAWWKAVSDLPHMNEPMVMKYDEIPRTATMKVQRLQMERELKK " misc_feature complement(380256..381749) /locus_tag="lmo0354" /note="O-succinylbenzoic acid-CoA ligase MenE or related acyl-CoA synthetase (AMP-forming) [Lipid transport and metabolism]; Region: MenE/FadK; COG0318" /db_xref="CDD:440087" regulatory complement(381788..381793) /regulatory_class="ribosome_binding_site" regulatory 382003..382008 /regulatory_class="ribosome_binding_site" gene 382016..383536 /locus_tag="lmo0355" /db_xref="GeneID:987602" CDS 382016..383536 /locus_tag="lmo0355" /EC_number="1.3.1.6" /experiment="EXISTENCE:[PMID:19448609]" /note="Reduces fumarate to succinate in anaerobic bacterial respiration" /codon_start=1 /transl_table=11 /product="fumarate reductase subunit A" /protein_id="NP_463885.1" /db_xref="GeneID:987602" /translation="MKKRLATTIIMLLSLALIIAGCGNNDTSKSDTAKTKEKEKTEVT SGASKTSYTDPSELKDKYDIVIVGAGGAGMSAALEAKAKGMNPVILEKMPLAGGNTMK ASSGMNASETKFQKEEGINDSNDKFYEETLKGGHGTNDKAMLRFFVDNSASAIDWLDS MDIKLNNLTITGGMSEKRTHRPEDGSAVGKYLVDGLLKNVQEQKIPVFVNADVKEITQ KDGKVTGVRVKLNNKDEKTISSDAVVVTTGGYGANKDMIEKERPDLKGYVTTNQEGST GDGIKMIEKLGGTTVDMDQIQVHPTVQQDKSYLIGEAVRGEGAILVSQEGKRFGNELD TRDNVTASINKLPEKSAYLVFDSGVKDRVKAIAQYEEMGFVEEGKTIDELAGKINVPK EELTKTLDTWNASVKNKKDEAFGRTTAMDNDLSKAPYYAIKIGPGIHYTMGGVKINTN TEVLDKDGKPITGLFAAGEVTGGLHGENRIGGNSVAEIIIFGRQAGDKSAEFVKAQ" misc_feature 382016..383533 /locus_tag="lmo0355" /note="flavocytochrome c; Region: PRK06481" /db_xref="CDD:180584" regulatory 383579..383624 /regulatory_class="terminator" regulatory 383697..383702 /regulatory_class="ribosome_binding_site" gene 383710..384726 /locus_tag="lmo0356" /db_xref="GeneID:987603" CDS 383710..384726 /locus_tag="lmo0356" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_463886.1" /db_xref="GeneID:987603" /translation="MLKMGFIGNGKSTNRYHLPFILERDNIEVKTIYNRNPKTATWDK IEGVHYTTDLDELLKDPEIQLITISTTQSSHFDYAKMVLENGKNVLVEKPFMMTYAEA KEIFELAKERGLLVQCYQNRRFDSDFLTAQKVIESGKLGELLEVEMHYDYFRPEIPES VHEFKFYDSYLYGHGCHTIDQVLSYFGKPDNIHYDVRQLLGEGRMNDYFDLDLYYGVT KVSVKSSYFRIKARPSFVLYGKKGTFTKETKDRQEEHLKLFYMPSNPDFGIDLPEHYG TLTYVDDAGVWHEEKVISEVGDYGRVYDDLYEAIINGKPKQVTDEETLLQMEILEKGV EACK" misc_feature 383710..384714 /locus_tag="lmo0356" /note="putative oxidoreductase; Provisional; Region: PRK10206" /db_xref="CDD:182305" regulatory 384736..384770 /regulatory_class="terminator" regulatory 384914..384919 /regulatory_class="ribosome_binding_site" gene 384926..385372 /locus_tag="lmo0357" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987604" CDS 384926..385372 /locus_tag="lmo0357" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS sugar transporter subunit IIA" /protein_id="NP_463887.1" /db_xref="GeneID:987604" /translation="MNISNLINEDRIIFDNRIQTKQLLFEKVAEVLVKEGSITNSKKF IRDLYNREEETSTGIEAGFGIPHAKSKYVKEPLIVFVHSGIIIDYFGLDDSPIECSFI IGVPKKATDVHLQILSELSRKLMNDEFREKLKNSKNENEIKTILSN" misc_feature 384926..385369 /locus_tag="lmo0357" /note="Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) [Carbohydrate transport and metabolism, Signal transduction mechanisms]; Region: PtsN; COG1762" /db_xref="CDD:441368" regulatory 385372..385377 /regulatory_class="ribosome_binding_site" gene 385386..386780 /locus_tag="lmo0358" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987605" CDS 385386..386780 /locus_tag="lmo0358" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIBC" /protein_id="NP_463888.1" /db_xref="GeneID:987605" /translation="MKIVGVTACPTGIAHTYMSAEKLTITAEALGYEVKIETQGAKVE NVLTKEDIATADYVILAVDKEIDTSRFAGKKIKKVSTSRAIKEADVVIDETVSGKGLI SLEAKSSDVSSEQPSKASLYNHFMNGVNYMLPFVIAGGILIAISFAFGIDASNPDSDS YNALAAAFSKIGGDTAFGLMVPALAAGIAVSVAGRAGFAPGLVAGTLATVGGSGFLGG MIGGILAGYVAHFFANKVNVTKSLASIYQLIVVPLLGITIVGLAMVFIIDTPIAWVLN ALTGWLNGLGETSGVVFGLLIGVMMAADMGGPINKSISTFSIGLMSAGVTAPIAACMA AGMVPPLGLALATLLFKNKFTKEEKTAGNSCWVLGASYITEGAIPFAVADPLRVIPSL MLGSATAAAISMGAGVTSMAPHGGIWVMFIPNVINHLFIYLLAIAAGTVVTAISVGLL KTPLNKRKNKEEMI" misc_feature 385386..386771 /locus_tag="lmo0358" /note="Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism]; Region: FrwC; COG1299" /db_xref="CDD:440910" regulatory 386767..386772 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0358" gene 386780..387640 /locus_tag="lmo0359" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987607" CDS 386780..387640 /locus_tag="lmo0359" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="D-fructose-1,6-biphosphate aldolase" /protein_id="NP_463889.1" /db_xref="GeneID:987607" /translation="MLYTMKDLLAVGKEHQFAVPAFNICSFDMLKAIMEEVEANNAPV ILEIHPDEIEYLGDNFVATVREYAYRSKVPVVIHMDHGGTIKDVMRAIRNGYTSVMID ASRASYEENVALTTQVVELAHKVGVSVEAELGTIGNNGSAEGGADTIIYTDPDQAEDF VSRTGIDTLAVAIGTAHGLYPKDKKPELNMPLLKELNKRLDIPFVLHGGSGNPDKEVS ESVQYGVRKVNLSSDLKSVFFEEVRRVLVDNPAMYEPNQVYPSANEKVKDVVRHKLDI LNTTGQADKY" misc_feature 386792..387637 /locus_tag="lmo0359" /note="hypothetical protein; Provisional; Region: PRK08185" /db_xref="CDD:181275" misc_feature order(386855..386863,386870..386872,386930..386932, 386939..386947,386957..386959,386966..386968, 386975..386980,387197..387199,387473..387478, 387482..387487,387494..387496,387506..387508, 387515..387517) /locus_tag="lmo0359" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:238477" misc_feature order(387017..387022,387305..387313,387317..387319, 387398..387403,387407..387409,387464..387466, 387470..387475) /locus_tag="lmo0359" /note="active site" /db_xref="CDD:238477" misc_feature order(387020..387022,387308..387310,387398..387400) /locus_tag="lmo0359" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:238477" misc_feature order(387305..387307,387311..387313,387317..387319, 387401..387403,387407..387409) /locus_tag="lmo0359" /note="Na+ binding site [ion binding]; other site" /db_xref="CDD:238477" regulatory 387683..387688 /regulatory_class="ribosome_binding_site" gene 387697..388467 /locus_tag="lmo0360" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987608" CDS 387697..388467 /locus_tag="lmo0360" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DeoR family transcriptional regulator" /protein_id="NP_463890.1" /db_xref="GeneID:987608" /translation="MLSTAKERQLKIVNRLKVEQFMRIIDLVEFVNYSEATVKRDLVE LEKEGLVRRTRGGAMIIDNKKIDLPYLMKMNERSNETSKIRIADIAKSLIRDDMVIFL DSSSTSLHLIDVLSKFDGLQIITNGVMTASMLSEFTNARVSILGGSILTKRYTVNGAK AYNDALTYNADIAFVSCRGIDYDKGATETHEGEALIKQAFRRQSSSLVLLVTEEKVGH KFMHQSLACHDIDYLITDFKLDPDVEEQFKTHQITCLY" misc_feature 387697..388464 /locus_tag="lmo0360" /note="DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family [Transcription, Carbohydrate transport and metabolism]; Region: GlpR; COG1349" /db_xref="CDD:440960" gene complement(388451..388678) /locus_tag="lmo0360a" /db_xref="GeneID:16695810" CDS complement(388451..388678) /locus_tag="lmo0360a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475627.1" /db_xref="GeneID:16695810" /translation="MYKIFSFVSLILSMLCFMGLQVLNVIQKNVILLSLFDSQDFNDI HFFGSLLVVPVLFLILAIIFAYLSIKSNTNK" gene 388520..388707 /locus_tag="lmos16" /db_xref="GeneID:18245108" misc_RNA 388520..388707 /locus_tag="lmos16" /product="rli26" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245108" gene complement(388807..389541) /locus_tag="lmo0361" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987609" CDS complement(388807..389541) /locus_tag="lmo0361" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="NP_463891.1" /db_xref="GeneID:987609" /translation="MTEVSMSLTGHLKELRTRLLIILLSFFLAFFVGLFVSKPLILFL QKDDLPKEVILHVFKVTDAFQIYIEMAFVIGLVLVFPVILYQLWAFVKPGLHASEQRI TLRYIPITFLLFLFGVVFSYLITFPFILKFMFQFAAELGVETTIGLATYFQFLLQIVL SFGVLFELPMVIMLLTRLSLITPNGMRHSRKYAYFCLLIIAAFIAPPEILSHLMITIP LIGLYEISIVVSGLTVRRMDKEMNNV" misc_feature complement(388822..389535) /locus_tag="lmo0361" /note="Twin-arginine protein secretion pathway component TatC [Intracellular trafficking, secretion, and vesicular transport]; Region: TatC; COG0805" /db_xref="CDD:440568" gene complement(389538..389717) /locus_tag="lmo0362" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987610" CDS complement(389538..389717) /locus_tag="lmo0362" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463892.1" /db_xref="GeneID:987610" /translation="MIGPGSIALIVGAALVIFGPKKLPELGRAAGDTLREFKNATKGM MDDSKEETKKEDLRP" misc_feature complement(389550..389714) /locus_tag="lmo0362" /note="twin arginine translocase protein A; Provisional; Region: tatA; PRK14861" /db_xref="CDD:237837" regulatory complement(389552..389557) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0362" regulatory complement(389726..389731) /regulatory_class="ribosome_binding_site" gene complement(389813..390430) /locus_tag="lmo0363" /db_xref="GeneID:987612" CDS complement(389813..390430) /locus_tag="lmo0363" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidase E" /protein_id="NP_463893.1" /db_xref="GeneID:987612" /translation="MKNLFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVTFY VEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQELKRTGAD KLILEEIAAGKLYIGESAGAVITSPNIAYIQTMDSTKKAVNLTNYDALNLVDFSTLPH YNNTPFKEITQKIVTEYAGKSQIYPISNHEAIFIRGKEVITKRLS" misc_feature complement(389831..390421) /locus_tag="lmo0363" /note="Peptidase family S51; Region: Peptidase_S51; pfam03575" /db_xref="CDD:397574" misc_feature complement(390074..390076) /locus_tag="lmo0363" /note="conserved cys residue [active]" /db_xref="CDD:153222" regulatory complement(390439..390444) /regulatory_class="ribosome_binding_site" regulatory 390517..390522 /regulatory_class="ribosome_binding_site" gene 390529..391473 /locus_tag="lmo0364" /db_xref="GeneID:987613" CDS 390529..391473 /locus_tag="lmo0364" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_463894.1" /db_xref="GeneID:987613" /translation="MKKSERLNDMMLFLNDKNVFQLSDIMTKYDISRSTAIRDVKSLE EIGMPIYSERGRNGHYQVLRNRLLSPIVFNIDEVFALYFSMLTLKAYETTPFHLSVEK LKTKFERCLSAEKIEMLRKTEEVFSLGYIKHNNQCEFLDVILQFTMEEKVCQINYDKK GIEKTYVVQFYNISSAYGQWYVTSYNFETKRMQVFRCDRILELEENHAFEAKKLTDLK SETDYLYKKKDAINFEVEIASNGVDLFFKENYPSMKLNQEQGRNVIRGFYNRGEEPFI INYLLGFGDKINMVQPDSLKEMLLNELKSLQNHLQKLS" misc_feature 390529..391461 /locus_tag="lmo0364" /note="Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains [Transcription]; Region: YobV; COG2378" /db_xref="CDD:441945" regulatory 391480..391510 /regulatory_class="terminator" regulatory 391590..391595 /regulatory_class="ribosome_binding_site" gene 391604..393052 /locus_tag="lmo0365" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987614" CDS 391604..393052 /locus_tag="lmo0365" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463895.1" /db_xref="GeneID:987614" /translation="MSHRLLGRVMLLLGALGVILTMSFSYVAAAEKPNIDKPVKGLEQ TEKAIVADDYNKAKDAFQEDKLWWSENKQVVKEKSYDLAGQIDRQIAEISLGILNNDK QQAMDGITSLHNLLKTYQDGTYTDNEGNTNITLSSYIAKLTATKKLVDEKEWAKAATQ IQDLKTEWLAVEGDVVSQSQAAYDNTERDLMLLDAYINDPAKQAKTADVLDGMTEELK PFADVTYTWFDAALIPFREGLEALLIIATLLTYTKRTKTRTAKRWIIGGTAAGLVVSL ALGMIVAFWLSALAFGDNNNLINGWAGLIASIMMLYVSYWLHRNSDITRWNNYMEGKS NQALSNGKMISFAFLAFLAILREGLETVVFLIGMVGRMSNFELLMGILAGLGVLLIIA FVMLRYSVHIPVKPFFMISSAIVFYLCFKFMGSGIHSLQLAGVIPTSVEDYLPSIPAL SIYPSWYSFLPQVLLVIFGLTILIKQQIKKKS" misc_feature 392273..393049 /locus_tag="lmo0365" /note="High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism]; Region: FTR1; COG0672" /db_xref="CDD:440436" regulatory 393074..393079 /regulatory_class="ribosome_binding_site" gene 393086..394246 /locus_tag="lmo0366" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987616" CDS 393086..394246 /locus_tag="lmo0366" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463896.1" /db_xref="GeneID:987616" /translation="MKKLIIVMLTIFTAVLVVGCSGTGTADKAETKKETTKESKQANA VKKEVKEMKSNLDDVKKAISDKDKSALQSSAAELHKHWLEFENNVRDLYPLQYTDVEK YETPIFYESKNDNPNFDTLNDNATGLDGALDTLEKAKETKAKTSEVLDKAVDNYSKYV TEQVDEFVAQTEIFTNAVKSGDIEKAKAAYVSPRLNYERIEPIAESFGDLDPKIDARI NDVENEADWTGFHVIERALWEKKSLEGMDVYADKLLTDAKALQAEVKNLKLEPKPMVA GAMELLNEAATTKITGEEEAYSHTDLDDLNANVEGSKVVYQAIIPALNAQDKKLADQI DAAFNKMEDTLANYKNGDSFVLYTTLTKDQIRDISDQLSHLSELMAQTGKIF" misc_feature 393086..>393280 /locus_tag="lmo0366" /note="Spore germination receptor GerD [Cell cycle control, cell division, chromosome partitioning]; Region: GerD; COG5904" /db_xref="CDD:444606" misc_feature 393491..394228 /locus_tag="lmo0366" /note="Iron uptake system EfeUOB, periplasmic (or lipoprotein) component EfeO/EfeM [Inorganic ion transport and metabolism]; Region: EfeO; COG2822" /db_xref="CDD:442070" regulatory 394251..394256 /regulatory_class="ribosome_binding_site" gene 394264..395529 /locus_tag="lmo0367" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987617" CDS 394264..395529 /locus_tag="lmo0367" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463897.1" /db_xref="GeneID:987617" /translation="MTDKKSENQTEKTETKENKGMTRREMLKLSAVAGTGIAVGATGL GTILNVVDQVDKALTPKEKAETGVPFYASNQAGIITAQQTYCYIASFDIQTESRQILQ DLFVKWTKFADLTTSGGVLRDVDNDMLPPNDTGEADGLGISNFTVTLGYGPTFFEKDG KDRFGVKAKKPKYLEKIPHMAHDSLDEAYSDGDLCIQVCADDQQVAFHGIRNFIRLAS GVAVVRWIEEGFLSAPKNETPRNLFGFKDGTANVDHDSNKGYKDVVWAEKDEPEWMRN GSYLGYRKIQMLIEIWDRSSLLDQEDTFGRKKASGAPYHKKHEHDKVDPSKLPADSHV RLAKDTKQQMHRRAYSYTNGIDKSTGTIDAGLLFICFTQNPAKQFLPMLSIMGKMDKL NEYTVPIGSAMFACQGGLAPGEIFGEKLL" misc_feature 394303..395526 /locus_tag="lmo0367" /note="Dyp-type peroxidase family; Region: Dyp_perox_fam; cl01067" /db_xref="CDD:470055" regulatory 395529..395563 /regulatory_class="terminator" regulatory 395587..395592 /regulatory_class="ribosome_binding_site" gene 395602..396111 /locus_tag="lmo0368" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987618" CDS 395602..396111 /locus_tag="lmo0368" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463898.1" /db_xref="GeneID:987618" /translation="MEEWDLLNENRELTGKTHIRGEKLAPGELHLVIHVCIFNEKGQL LIQKRQKDKEGWPNYWDLSAAGSALKGETSQQAAEREVQEELGIMIDLSGTRAKFSYH FEEGFDDYWFITKDVQLSDLTLQKEEVADARFVTKEELEALRSSGEFIPYFFLNQLFN LKNATTIHF" misc_feature 395605..396057 /locus_tag="lmo0368" /note="uncharacterized NUDIX hydrolase subfamily; Region: NUDIX_Hydrolase; cd04693" /db_xref="CDD:467575" regulatory 396191..396196 /regulatory_class="ribosome_binding_site" gene 396208..396927 /locus_tag="lmo0369" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987619" CDS 396208..396927 /locus_tag="lmo0369" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463899.1" /db_xref="GeneID:987619" /translation="MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSN QKLRFVIERAKTYNVPKHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNN VNRTASDVRAAYSKNGGNMGVSGSVAYMFDNTAIFGVEGKDADELLELLMEADIDVRD ILDEDGQAIIYAEPEDFHKVQEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFERL IDALEDLEDVQKVYHNVELED" misc_feature 396208..396915 /locus_tag="lmo0369" /note="YebC/PmpR family DNA-binding transcriptional regulator; Region: PRK12378" /db_xref="CDD:237084" regulatory 396948..396953 /regulatory_class="ribosome_binding_site" gene 396964..397299 /locus_tag="lmo0370" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987620" CDS 396964..397299 /locus_tag="lmo0370" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463900.1" /db_xref="GeneID:987620" /translation="MSKLPNCPECNSEYAYEDRGLLICPECGHEWSAAAEEASEEKVF KDANGNVLTDGDSVTVIKDLKVKGASNPIKMGTKVKNIHLVDGDHDIDCKIDGFGPMK LKSEFVKKI" misc_feature 396967..397296 /locus_tag="lmo0370" /note="Uncharacterized Zn-ribbon-containing protein [General function prediction only]; Region: PhnA; COG2824" /db_xref="CDD:442072" regulatory complement(397295..397333) /regulatory_class="terminator" regulatory 397306..397344 /regulatory_class="terminator" gene complement(397340..398053) /locus_tag="lmo0371" /db_xref="GeneID:987623" CDS complement(397340..398053) /locus_tag="lmo0371" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="NP_463901.1" /db_xref="GeneID:987623" /translation="MSGMAKYMEIYIDIRDKINQNKYEINEKLPDGDSLARVYDCSKL TVKKALDMLVQEGMVIRRRGAGTFVKSHSTNGGEFALGPMSGLVNTFGKDNIKSKVIL FSIEKPSKEVAEKLEMQDDYIYRIIRMREVGHKAYSIEHTYMPLAIIPGLEPRHLEDS IYNYIRDDLKLKMQSAHVWVRGDKSNQEDSKLLDLEEPTFMMEIEKLAHLEDGRVFEY SITRHTYESFVFETVFVQN" misc_feature complement(397352..398053) /locus_tag="lmo0371" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: MngR; COG2188" /db_xref="CDD:441791" regulatory complement(398061..398066) /regulatory_class="ribosome_binding_site" regulatory 398195..398200 /regulatory_class="ribosome_binding_site" gene 398210..399652 /locus_tag="lmo0372" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987624" CDS 398210..399652 /locus_tag="lmo0372" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="beta-glucosidase" /protein_id="NP_463902.1" /db_xref="GeneID:987624" /translation="MKELLTFPKDFWWGSAWSAEQAEGRGDTGKAKTVWEHWFETEPN RFYEGVGSEITTDHFNRYKEDVQWMKKTGQNSFRISISWARMFPDDGVGEVNQKAIAF YRDLLTEMNENGVKPFANLYHFDMPVALQDAGGWESREVVDAYVHFADTCFKEFGDLV YHWFTFNEPLGPILGGYLEGFHYPNQIDFKRGTQAGFNTILAHTLAIKAFKKINLSSK IGVILNLSPTYPRSQNEYDLEAAEICDAFYTRSFLDPMVKGTFPEKLVEIMREYDQMP EYTEEDLTIIKENTAQILGLNYYEPRRVKARLTAINEKSPFLPDWFFEPHNMPGKRMN IYRGWEIYERGIYDLCIDIRDNYGNIESFISENGMGVANEERFLNEEGQIQDDYRIQF VKDHLAYVHQAIAEGCDIKGYHLWTFIDCWSWINAYKNRYGLVSLDVETGKRTMKKSG EFYKKMSDMNGFEYETSKLVGTKREETTNG" misc_feature 398222..399577 /locus_tag="lmo0372" /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase [Carbohydrate transport and metabolism]; Region: BglB; COG2723" /db_xref="CDD:442035" regulatory 399630..399635 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0372" gene 399645..400979 /locus_tag="lmo0373" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987627" CDS 399645..400979 /locus_tag="lmo0373" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS beta-glucoside transporter subunit IIC" /protein_id="NP_463903.1" /db_xref="GeneID:987627" /translation="MAETKKKSIVNGFINVAQRLGGQIHLRSLRDAFASIMPFMILAG FVTLINYVILEPTGFMGKIVNPDTLRTWQEIGISIGNGTLSVITLLVTVAISYHLCLN RGYKNVIAPILVALSSFIVVTPIAMTFLPEGASKSIEVPNVIPVSYTGASGMFVGIIV GLIATDLFIKLSKNKRMQINLTGNIPPAVIKSFNVLIPIMITVIIFSVMSFAVNQIFS MDFNTLVTTIITKPLSYVTTSLPGFLLITSIANLFFGLGIHQAVISGPLLDPFLLQNM QENMVAYANHQEIPHIINMAFKDTFAVMGGSGNTIGLLIAIFIFGKRKDYKDISKLSA APSLFNISEPIIFGLPIVFNPLLIIPFVLAPIFSLTTAYYATAAGWINHVVVQTPWTT PPIISGFLATGGDWRASVLQVIIIVVTVFIYLPFLRMDEKVAFATAQKSDAK" misc_feature 399663..400964 /locus_tag="lmo0373" /note="Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]; Region: CelB; COG1455" /db_xref="CDD:441064" regulatory 400983..400988 /regulatory_class="ribosome_binding_site" gene 400997..401299 /locus_tag="lmo0374" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987628" CDS 400997..401299 /locus_tag="lmo0374" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS beta-glucoside transporter subunit IIB" /protein_id="NP_463904.1" /db_xref="GeneID:987628" /translation="MKNILLVCNAGMSTSFLVEKMKAAGTEQGVEANIWAVSDAELHE NWEKADVILLGPQVGYLKGNTEKVVGGKIPVEVINMLDYGRVNGAAVLERAIELIG" misc_feature 401000..401296 /locus_tag="lmo0374" /note="Phosphotransferase system cellobiose-specific component IIB [Carbohydrate transport and metabolism]; Region: CelA; COG1440" /db_xref="CDD:441049" regulatory 401309..401344 /regulatory_class="terminator" regulatory 401371..401376 /regulatory_class="ribosome_binding_site" gene 401386..401580 /locus_tag="lmo0375" /db_xref="GeneID:987629" CDS 401386..401580 /locus_tag="lmo0375" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0375" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463905.1" /db_xref="GeneID:987629" /translation="MKYVKSQMKELVKDSVDLQERLQKLMKEMDLEKTFALKALYHSE VADGGAYQTAYQDLDYKYKD" regulatory complement(401577..401615) /regulatory_class="terminator" regulatory 401588..401626 /regulatory_class="terminator" gene complement(401619..402539) /locus_tag="lmo0376" /db_xref="GeneID:987632" CDS complement(401619..402539) /locus_tag="lmo0376" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_463906.1" /db_xref="GeneID:987632" /translation="MKIERLIGIIMLLLQRELVSASEMATMFEVSKRTIFRDIDTLAM ANIPIYTIAGTKGGIGIMPTYKVDKKLLTADDLTAIIASLDGMEQLLSSAETKKTLQK MKNMLDHSSEPPKSSISLDFSNLSMKNELNAKVESLYLAIKKHQLVELSYIDRTGNQT VRKTEPYHLLFRNRSWYLQGYSLERSDFRTFKMSRIVELKTLEETFEVRPFTVKPFGA PPDRPMFLMHEVSLIVDKIAREQIIERFDLVEISQQDDAHFLAKVTLPDHEAGYRFLL QLGTHVTIQNRDDFYDNFIDYLKEIQGKYI" misc_feature complement(401625..402539) /locus_tag="lmo0376" /note="Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains [Transcription]; Region: YobV; COG2378" /db_xref="CDD:441945" regulatory complement(402545..402550) /regulatory_class="ribosome_binding_site" regulatory 402627..402632 /regulatory_class="ribosome_binding_site" gene 402641..403060 /locus_tag="lmo0377" /db_xref="GeneID:987633" CDS 402641..403060 /locus_tag="lmo0377" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0377" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463907.1" /db_xref="GeneID:987633" /translation="MAFEIVELKKETFTGNKVEIPEFDPQKGFGPMSEIKEAAYTKFA KNEKDYVGINASLDGLQYYIVASTNGENGDTTFDIPEGKYAKFVTSETDRPALDGFIG ASYGEVGQSDTVGIAGSFNLEDLREAEFTLYIPVVSK" misc_feature 402650..403048 /locus_tag="lmo0377" /note="Integron-associated effector binding protein; Region: Cass2; pfam14526" /db_xref="CDD:434016" regulatory 403068..403102 /regulatory_class="terminator" regulatory 403264..403269 /regulatory_class="ribosome_binding_site" gene 403279..403725 /locus_tag="lmo0378" /db_xref="GeneID:987634" CDS 403279..403725 /locus_tag="lmo0378" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0378" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463908.1" /db_xref="GeneID:987634" /translation="MRKLDFSYNNANYNAEFLMKILTTLKDITKVEQFTIEIIDAVPN DQEQFKEEKGLFSKEVFDFNNLVKESHGIKIDFKEITNILKQCRTVWELSMLVVTSEN ELNDSGKVLCEVELIEGDLFAILYSEDFNIDLFLEKFSTDEITIEG" regulatory 403728..403733 /regulatory_class="ribosome_binding_site" gene 403743..404198 /locus_tag="lmo0379" /db_xref="GeneID:987635" CDS 403743..404198 /locus_tag="lmo0379" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0379" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463909.1" /db_xref="GeneID:987635" /translation="MFKIIESKIKSQGQLSYFKDSHEFISEPRINSDTTILVGYIYIG FDSEYNESTQIWGFHHDFNWKSSKLTPPKFIQGKIILNEDFINPGESKRIGAANSWET IYDESSGWLRFGGVNNSVETCYVEFFPNTIMGIDENGDITELWLCPTLK" gene 404365..404994 /locus_tag="lmo0380" /db_xref="GeneID:987636" CDS 404365..404994 /locus_tag="lmo0380" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0380" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463910.1" /db_xref="GeneID:987636" /translation="MNKFKILGEYKDWCEIYKDGTLIHNGSSLGIVSQVESELCLRLN YGTNKHFYSILKKCGDFILAVPKKVGFLKAEYKYEPIIFNKQEFDEFIDCIYVDEKLI SSIPQLNKEDILNMWFLSNPLHKTYSNEMEMQENIINNILFFSDDEYDISCLKKVINK PDLSVHPIDSNYEVITIYMDGDAGMYEWKGIVIIDNNAYLKIDTHYYIN" regulatory 405208..405213 /regulatory_class="ribosome_binding_site" gene 405221..405607 /locus_tag="lmo0381" /db_xref="GeneID:987637" CDS 405221..405607 /locus_tag="lmo0381" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0381" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463911.1" /db_xref="GeneID:987637" /translation="MINELQKKIDEINYWDLLVLDIQSKYFGDEVYIYIEKDEEICWK LSFTSCYKVSYETDAKWRGDFKVRNTGPKSGYYAQDISLNRYAENEDFIECSFDASIM TMNIICKEIIVEEVSVIENSFFWKNY" regulatory complement(405630..405662) /regulatory_class="terminator" gene complement(405680..406441) /locus_tag="lmo0382" /db_xref="GeneID:987638" CDS complement(405680..406441) /locus_tag="lmo0382" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_463912.1" /db_xref="GeneID:987638" /translation="MKVQRIQAIENLIHEKGSISLDDLCEQFNVSKNTVRRDIAKLLQ KNTIQKVYGGVVSVYNNPEEIRPFENRDTENHLEKQLIGKAAADFIEENDLIFIDSGT TTSCLAAALPTDKEITIITNSLDVINFASEMDNVKLIVIGSTFKPSTKSFVGVENWGF FEKYNITKAFMAATALSTAHGVMNSDILEYEIKRHMMEKATAKFLLVDHTKVDKSALL TYGELAEFDWLVTSKDIAGGCLGYCEDVGVLVRLV" misc_feature complement(405683..406441) /locus_tag="lmo0382" /note="DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family [Transcription, Carbohydrate transport and metabolism]; Region: GlpR; COG1349" /db_xref="CDD:440960" regulatory complement(406450..406455) /regulatory_class="ribosome_binding_site" regulatory 406623..406628 /regulatory_class="ribosome_binding_site" gene 406637..408103 /locus_tag="lmo0383" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987639" CDS 406637..408103 /locus_tag="lmo0383" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="methylmalonate-semialdehyde dehydrogenase" /protein_id="NP_463913.1" /db_xref="GeneID:987639" /translation="MADVRKLKNYIDGEWVESKTDKYEDVINPATGEVLCQVPISTRA ELDQAAVIAEQAFEKWSQVAVPRRARVLFGFQQLLIQHKEELARLITLENGKNLSEAR GEVQRGIENVEFAAGAPTLMMGDSLASIATDVEAANYRYPVGVVGGIAPFNFPMMVPC WMFPMAIALGNSFILKPSERTPLLMEKLVELFSEAGLPKGVFNVVYGAHDVVNGILEN EIIKAVSFVGSKPVGEYVYKTGSANLKRVQALTGAKNHTIVLNDADLEDTVTNVISAA FGSAGERCMACAVVTVEEGIADEFLEALRTAAQNVKIGNGLDDGVFLGPVIREENQKR TIAYIEKGIEEGAKLTVDGRETGLSEGHFVGPTILEDVTTDMTIWKDEIFAPVLSVIR VKNLQEAVRVANQSEFANGACIFTNNAKAIRYFREKIDAGMLGVNLGVPAPMAFFPFS GWKSSFYGTLHANGKDSVDFYTHKKVVTARYSLKGYEE" misc_feature 406655..408079 /locus_tag="lmo0383" /note="Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2; Region: ALDH_F6_MMSDH; cd07085" /db_xref="CDD:143404" misc_feature order(406826..406828,406832..406834,406844..406846, 406853..406855,406865..406867,406964..406966, 406973..406978,407003..407026,407039..407041, 407048..407050,407057..407059,407336..407338, 407348..407350,407357..407359,407366..407368, 407372..407374,407885..407887,407891..407896, 407900..407905,407912..407914,407921..407926, 407930..407932,407936..407947,407972..407974, 407984..407986,407990..407992,408032..408034, 408053..408070,408074..408079) /locus_tag="lmo0383" /note="tetrameric interface [polypeptide binding]; other site" /db_xref="CDD:143404" misc_feature order(407084..407095,407117..407119,407162..407164, 407171..407173,407261..407263,407312..407323, 407330..407332,407384..407392,407486..407488, 407780..407782,407786..407788,407864..407866) /locus_tag="lmo0383" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:143404" misc_feature order(407093..407095,407384..407386,407477..407479, 407486..407488) /locus_tag="lmo0383" /note="catalytic residues [active]" /db_xref="CDD:143404" regulatory 408102..408107 /regulatory_class="ribosome_binding_site" gene 408116..408937 /locus_tag="lmo0384" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987640" CDS 408116..408937 /locus_tag="lmo0384" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="IolB protein" /protein_id="NP_463914.1" /db_xref="GeneID:987640" /translation="MGKLLRKPLNERIAPGVTLVQDINQGNSPLSYVGFRLIELEEDA VYQETLDGLECCIVALTGKISVSEGDHVFSEIGTRANVFEKIPTDSVFISGGRAFQVK ADAEKARVALCYSPADRNLPTTLIKASDNSIEQRGKYQNKRLVHNILPDVSEVASSLL VVEVYTDGGNFSSYPPHKHDHDNLPAESLLEESYYHEINPKQGFIFQRVYTDDRALDE TMAVEHQNAVIVPEGYHPVGVPDGYDSYYLNVMAGPKRVWEFHNDPDHEWILERD" misc_feature 408116..408934 /locus_tag="lmo0384" /note="5-deoxy-D-glucuronate isomerase [Carbohydrate transport and metabolism]; Region: IolB; COG3718" /db_xref="CDD:442932" regulatory 408939..408944 /regulatory_class="ribosome_binding_site" gene 408954..409931 /locus_tag="lmo0385" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987641" CDS 408954..409931 /locus_tag="lmo0385" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="IolC protein" /protein_id="NP_463915.1" /db_xref="GeneID:987641" /translation="MNLKKHSERKFDLITVGRACIDLNAVEYNRPMEETMTFSKYVGG SPANIAIGTAKLGLKVGFIGKISDDQHGRFIEKYMRDLAINTDGMVKDTEGRKVGLAF TEIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSREAVLKA VSLARKNDVVVAFELDYRPYTWKNSEETAVYYSLVAEQADVIIGTRDEFDMMENQVGG KNEATKAYLFQHQAKIVVIKHGVEGSFAYTKAGETFQAQAYKTKVLKTFGAGDSYASA FLYGLFSDESIETALKYGSAAASIVVSKHSSSDAMPTADEIKALIAQAE" misc_feature 408981..409916 /locus_tag="lmo0385" /note="5-dehydro-2-deoxygluconokinase; Region: myo_inos_iolC_N; TIGR04382" /db_xref="CDD:275175" misc_feature order(409083..409088,409095..409097,409254..409256, 409296..409298,409302..409304,409389..409391, 409485..409487,409755..409757,409764..409766) /locus_tag="lmo0385" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238571" misc_feature order(409665..409667,409680..409682,409728..409730, 409755..409763,409770..409772,409836..409838, 409848..409850) /locus_tag="lmo0385" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:238571" regulatory 409930..409935 /regulatory_class="ribosome_binding_site" gene 409944..411860 /locus_tag="lmo0386" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987642" CDS 409944..411860 /locus_tag="lmo0386" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="IolD protein" /protein_id="NP_463916.1" /db_xref="GeneID:987642" /translation="MTEKTIRLTTAQALVKFLNQQYIEVDDEMAPFVDGIFTVFGHGN VVGIGQALEEDPGHLNVYQGKNEQGMAHAAIAYAKQKNRKRIYACSASAGPGSANLIT AASTALANNLPVLFLPADTFATRQPDPVLQQLEHESSAAITTNDGFQAVSRYFDRVQR PEQLMSALIRAFEVMTNPASAGPATICIAQDTEGEAFDYPVEFFQKRIHYLNRQIPTK RELTEAARLIQASKTPVIIVGGGARYSDAREELIALSEQSNIPLVETHAGKSTVEFDF KNNLGGTGILGTLAANKAIRDADLVIGIGTRYTDFTTSSKTAFGPATKFININVSRMQ TYKLDAFQVVGDAKATLAELAPLLKGYQTQFGDRIAVYKAEWLAERTRLQNTKFNREA FTPEIKDQFDQATLNEYADSLQTEFTQTEALITINDTVAPDSIVVCSAGSLPGDLQRL WNPAVPNTYHLEYGYSCMGYEINGALGAKMAAANNQEVYSIVGDGSFCMSHSELLTSL QYGKKINIMLFDNSGFGCINNLQMANGSDSFFCEFRDSDNQIMQVDYAKIAEGYGAKV YRANTKEDLISALEDAKKQTKTTLIDMKVLPKTMSEGYLNWWNVGVSEVSNKESIKQA YEEKQTNLKNARLY" misc_feature 409947..411857 /locus_tag="lmo0386" /note="TPP-dependent trihydroxycyclohexane-1,2-dione (THcHDO) dehydratase, myo-inositol metabolism [Carbohydrate transport and metabolism]; Region: IolD; COG3962" /db_xref="CDD:443162" regulatory 411873..411903 /regulatory_class="terminator" regulatory 411979..411984 /regulatory_class="ribosome_binding_site" gene 411992..412363 /locus_tag="lmo0387" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987643" CDS 411992..412363 /locus_tag="lmo0387" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463917.1" /db_xref="GeneID:987643" /translation="MEVFAEYLAEIENPDHRARTQEVLTWVAETFPDLKPEIKWNTPM FTNNGTFIIGFSIAKQHMSVSPEVAGIERFEADIKEAGYSHTKGIFRITWAKSVDYDL LAKIIKFNIQDKANYTSFWRV" misc_feature 411992..412336 /locus_tag="lmo0387" /note="Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis) [Posttranslational modification, protein turnover, chaperones, Inorganic ion transport and metabolism]; Region: Fra; COG5646" /db_xref="CDD:444369" regulatory 412441..412447 /regulatory_class="ribosome_binding_site" gene 412457..412825 /locus_tag="lmo0388" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987645" CDS 412457..412825 /locus_tag="lmo0388" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0388" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463918.1" /db_xref="GeneID:987645" /translation="MRIFCGIMSIQAGFIGALAEILSPDSKKNNLFMIPEDLAASSGY LMSLAMVLAGILIICAYRNDFLIFMALILWLFGLIFGLIFTPSYSGFYFRPIVCLISF LMGLFIFTDYTRHQDTGEER" regulatory complement(412818..412842) /regulatory_class="terminator" regulatory 412821..412850 /regulatory_class="terminator" gene complement(412849..413964) /gene="ltrA" /locus_tag="lmo0389" /db_xref="GeneID:987647" CDS complement(412849..413964) /gene="ltrA" /locus_tag="lmo0389" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="low temperature requirement protein A" /protein_id="NP_463919.1" /db_xref="GeneID:987647" /translation="MTERKVSWLELFFDLIFVTAVASTTHLLLSVDNHPDKTAAYFGE YLLMVTPMFWAWVGQTMFFNRFGEKIKWPELYMLSQMFFLILMTASFDLTFSNTYYTF LIGYLGIRFITVIQYFVISKQLTGNAQKVALLLGSVFLLGVLTTATSVFFEGFARYLV MYLGIAVDIILPLFLAKTLRKVPVDFPHLAERFGLFVIITFGESIVAITTILVGHTLD LYTICYTLLGFLIICTLWASYFYSFEKIVDHHKVTHGQFLIYGHFFIIVSVMLLAVNL HLLFEGHLQRDVLLLLLFSSVAVFFISKQFVFAAHKKAEVSFSFWKDALLLLLLVGLF FVNLYINLPLFVSFVSIWICALVDLGLQFGTSRSVRM" misc_feature complement(412894..413943) /gene="ltrA" /locus_tag="lmo0389" /note="Bacterial low temperature requirement A protein (LtrA); Region: LtrA; pfam06772" /db_xref="CDD:462006" regulatory complement(413970..413975) /regulatory_class="ribosome_binding_site" regulatory 414082..414087 /regulatory_class="ribosome_binding_site" gene 414095..414760 /locus_tag="lmo0390" /db_xref="GeneID:987648" CDS 414095..414760 /locus_tag="lmo0390" /experiment="EXISTENCE:[PMID:19448609]" /note="Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine" /codon_start=1 /transl_table=11 /product="uracil-DNA glycosylase" /protein_id="NP_463920.1" /db_xref="GeneID:987648" /translation="MVKTWEEFLKQEAKQPYFIELMEAVKDARAKGNVYPSEEDMFSC FRLCPYNQVKVVILGQDPYHGPGQAHGLSFSVQKDVRIPPSLRNIYKELKTDLDIEPA DHGYLAKWAEQGVLLMNTSWSVEEGKAGSHKKLGWATFTDHVLEELNNYDKPLVFILW GNHAIKAASGITNPQHLIIKGVHPSPLAASRGFFGSKPFSKTNAFLEEHERKPIDWDL NEQ" misc_feature 414104..414742 /locus_tag="lmo0390" /note="Uracil-DNA glycosylase [Replication, recombination and repair]; Region: Ung; COG0692" /db_xref="CDD:440456" regulatory 414914..414919 /regulatory_class="ribosome_binding_site" gene 414928..415227 /locus_tag="lmo0391" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987649" CDS 414928..415227 /locus_tag="lmo0391" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0391" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463921.1" /db_xref="GeneID:987649" /translation="MKHNFTEDDFVYGESWGLVHRGVLEDKEVERMKALRDKVVGKKG VAQTTLKPIGSVRIDGEVYEARLKTGYLEVGKPIIAVGIDFGYVLVNEDIQEGEK" misc_feature <415033..415197 /locus_tag="lmo0391" /note="Membrane-bound serine protease NfeD, ClpP class [Posttranslational modification, protein turnover, chaperones]; Region: NfeD; COG1030" /db_xref="CDD:440653" regulatory 415211..415216 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0391" gene 415224..416168 /locus_tag="lmo0392" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987651" CDS 415224..416168 /locus_tag="lmo0392" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463922.1" /db_xref="GeneID:987651" /translation="MTMIGPIIIAVLIIIFLIVFFTLVPVGLWISALSARVPVGLGTL IGMRLRRVVPSRVVKPLIKAVKAGLDLEVNQLESHYLAGGDVDNTVDALIAAHRANIE LDFSRAAAIDLAGRDVLEAVQTSVTPKVIRTPEFTGVAQNGVEVKVITQITVQSNIER IVGGAGEDTVIARVGEAVVSTVGETREHTDVLENPNSISKKVQEQGLGDGTAYTILSI DIAEMRIGDNIKAKLDIEKANADMEVAQAAASKRKAEAIALEQENRAAVVAAEAEVPR ALSRALEEGNLGVMDYYKMENVQSDTAMRESIAHEDEK" misc_feature 415224..416147 /locus_tag="lmo0392" /note="hypothetical protein; Provisional; Region: PRK13665" /db_xref="CDD:237462" regulatory 416189..416194 /regulatory_class="ribosome_binding_site" gene 416203..416652 /locus_tag="lmo0393" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987652" CDS 416203..416652 /locus_tag="lmo0393" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0393" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463923.1" /db_xref="GeneID:987652" /translation="MDLSDFLNSGWESVLVVLGIVGVIINFLSKAGKGTEEENKKAPQ PRPNLRSMHQASRTQTTKKPEKRKVSQGTFTQNKEQDKVIAEQKAAQQKMLREIRRES DVAKGKNIIKSTSSHQKKARKLRGRLQEAIITKEILDKPVSLRKNHL" regulatory 416660..416691 /regulatory_class="terminator" regulatory 416782..416787 /regulatory_class="ribosome_binding_site" gene 416796..417479 /locus_tag="lmo0394" /db_xref="GeneID:987653" CDS 416796..417479 /locus_tag="lmo0394" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="P60 protein" /protein_id="NP_463924.1" /db_xref="GeneID:987653" /translation="MNIIATRRKIFFAFIALMISFSVLFLPTTNASAATTYKMTTTAD VNVRAADNTKGKVIGFYKKGTTVNFTAKTKNNWYKTTYKGKVGYVSGKCVTTYKAPVA TTQSFTALNNEARKHIGKRYKIGATGPSCFDCSGYTQYVYSKGVKKSIPRTAKQQYAS AKKIKAKELKKGDLIFFNYGKGVAHVGIYVGNGKMLNAQNNGVKYDTITSGYWKKYIA GYGRVANLK" misc_feature <416874..417464 /locus_tag="lmo0394" /note="invasion associated endopeptidase; Region: PRK13914" /db_xref="CDD:237555" regulatory 417489..417519 /regulatory_class="terminator" regulatory 417521..417526 /regulatory_class="ribosome_binding_site" gene 417535..417960 /locus_tag="lmo0395" /db_xref="GeneID:987654" CDS 417535..417960 /locus_tag="lmo0395" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="blasticidin S-acetyltransferase" /protein_id="NP_463925.1" /db_xref="GeneID:987654" /translation="MQYKIKEMPLEELEPKVVEGLLEHKERLGYNIPKKDTEYIGFAA LSEVGEMVGGVTAKISYGELHVSLLSVDPSTQGSGVGTELMAQIERYGRANSCHHISL TTFSYQAPEFYRKCGFTELGRVKDFPIKGEEKYFFIKYL" misc_feature 417718..417957 /locus_tag="lmo0395" /note="Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]; Region: RimI; COG0456" /db_xref="CDD:440224" gene complement(417963..418763) /gene="proC" /locus_tag="lmo0396" /db_xref="GeneID:987655" CDS complement(417963..418763) /gene="proC" /locus_tag="lmo0396" /EC_number="1.5.1.2" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of L-proline from pyrroline-5-carboxylate" /codon_start=1 /transl_table=11 /product="pyrroline-5-carboxylate reductase" /protein_id="NP_463926.1" /db_xref="GeneID:987655" /translation="MNRIGFIGAGNMGTAMIRGLAQANLVKREEIIVGGRNLEKLKPL EAEFTGLQITTDTEKLVEQADIIILAVKPYTIPEILTSVKEKLTPDKIIISVAAGVTI QDLEELTSAKTKIVRVMPNTPALVGEAMSSVSPNTNVTSEELKEVTAIFTSFGEAEVV SENLMDAVIGVSGSSPAYVYMFIEALADGAVLSGMPRDKAYKFAAQAVLGAAKTVLET GEHPGKLKDMVTSPGGTTIEAVKSLENDGFRSAVINAVQAAAKKNSSM" misc_feature complement(417978..418763) /gene="proC" /locus_tag="lmo0396" /note="Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]; Region: ProC; COG0345" /db_xref="CDD:440114" regulatory complement(418771..418776) /regulatory_class="ribosome_binding_site" regulatory 418878..418883 /regulatory_class="ribosome_binding_site" gene 418891..419373 /locus_tag="lmo0397" /db_xref="GeneID:987657" CDS 418891..419373 /locus_tag="lmo0397" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463927.1" /db_xref="GeneID:987657" /translation="MNEAIERRDDDMTIVSFEVEISAPIQEVFALLTTNTGLAKWFNE LEVGELGADGYLLFVMTPEEKITMPIRAFEPNQKLAFEWDQDEVAFELNEITANKTRL TFTEQLTTITEHSPRDISGWHICLKKLQASAEGKIYDFNKTEFKTLFAKYQKELNIEK " misc_feature 418894..419352 /locus_tag="lmo0397" /note="Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins; Region: SRPBCC_CalC_Aha1-like_6; cd08899" /db_xref="CDD:176908" misc_feature order(418933..418935,418939..418941,418945..418947, 418972..418980,418984..418989,419002..419004, 419026..419028,419050..419052,419056..419058, 419062..419064,419068..419070,419083..419085, 419089..419094,419098..419100,419107..419109, 419125..419127,419131..419136,419149..419154, 419158..419160,419164..419166,419197..419199, 419203..419205,419209..419211,419215..419217, 419230..419256,419260..419268,419275..419277) /locus_tag="lmo0397" /note="putative hydrophobic ligand binding site [chemical binding]; other site" /db_xref="CDD:176908" regulatory 419387..419432 /regulatory_class="terminator" regulatory 419531..419537 /regulatory_class="ribosome_binding_site" gene 419544..420002 /locus_tag="lmo0398" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987659" CDS 419544..420002 /locus_tag="lmo0398" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS sugar transporter subunit IIA" /protein_id="NP_463928.1" /db_xref="GeneID:987659" /translation="MIVSEEQLFLNQHLSTKEEVLAFIADKAAEIGITTNSAQVERDL WAREKEYATAVQQLIAIPHAKTEAILEAKLLFIRLVEPIDWESKEGFKAQAIFAILVP ASEASQQHLKILSSVAVNLLEEAFQEQILTIKTEHELMDYLKDNLEGELI" misc_feature 419547..419984 /locus_tag="lmo0398" /note="Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) [Carbohydrate transport and metabolism, Signal transduction mechanisms]; Region: PtsN; COG1762" /db_xref="CDD:441368" regulatory 419987..419992 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0398" gene 419999..420331 /locus_tag="lmo0399" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987673" CDS 419999..420331 /locus_tag="lmo0399" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIB" /protein_id="NP_463929.1" /db_xref="GeneID:987673" /translation="MKVVGVTSCIAGLAHTPMAAKALEKAGVKLGHDVKIEQQGAMGT IDEITPAEVSAADVVIIAADKVIDGEDRFKGKPVVRVKIGQCVANGEAVLSKVVAAIE ARKQKEAN" misc_feature 420002..420298 /locus_tag="lmo0399" /note="Phosphotransferase system fructose-specific component IIB [Carbohydrate transport and metabolism]; Region: FrwB; COG1445" /db_xref="CDD:441054" regulatory 420318..420323 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0399" gene 420335..421447 /locus_tag="lmo0400" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987677" CDS 420335..421447 /locus_tag="lmo0400" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIC" /protein_id="NP_463930.1" /db_xref="GeneID:987677" /translation="MKGKLNEAKDHLMSGISYALPVIIAGSLVVAVAKLIGIIGGVTN LDAYADASGFYHYVYLFQNVGWAAIGLLNLVLAGYIAYSIAGKPALAAGFVGGVLATS TNAGFLGAVVAGFFAGWLTNWVKKHVRITGPAASSLPLIILPLITVGATGILMSLILG GPLGWLNQTLLDWVTEMCKNDTNVIILALILGAMIGFDLGGPVNKAAWMAGNALFMSG IYLPSIMINVAICIPPLGYGIATLLRKKNYSTTFKEAGNGALIMGLIGVTEGAIPFTL RSPGKLIPLNVIACAIGSAVTMGLGAYVKMPPIGGMYGFFTIGNGWAYLVGGLVGAFI IGICANLFVNFTEEETAAADDVLDDIDISFDEIEIK" misc_feature <420338..421393 /locus_tag="lmo0400" /note="Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism]; Region: FrwC; COG1299" /db_xref="CDD:440910" regulatory 421452..421457 /regulatory_class="ribosome_binding_site" gene 421469..424096 /locus_tag="lmo0401" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987679" CDS 421469..424096 /locus_tag="lmo0401" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alpha-mannosidase" /protein_id="NP_463931.1" /db_xref="GeneID:987679" /translation="MTKTKVHVIPHSHWDREWYFTSSRSTIYLVKHLKEVIETLEAKE DYHFYLMDAQSSLIEDYLRYCPEDKSRLEKLIAEKRLITGPWYTQTDQLVISQESIVR NLLYGTRIAREMGHSMAVGYVPDAFGQGGNMPQIYKEFGISKFLFWRGVADNRLKQTE FIWRGDDGTEMLAEQIPFGYYYGANIPENEAELKTYLDEQIGALEEKASTPNVYFPNG LDQAPVRKNLPELVAKFNELDSTREYQIASPETFFADLEKDVTDLPVIAGELTEGKHS RLHKSIFSTRADLKQANNQIENFLSNVLEPVLSISYSLGNRYPHNELAEIWKLMFENA AHDSIGGCNSDTTNRDVKHRYKLASDLATNLLDLNMRLISEKIEQRQPFQFTVFNPLP YEKSGVIKMTAYIPEDNFTVEDTQGNTLEYTILEKTDLTEYVLNQHIDLNPSRPVYLP EKVFLATMLVNVNNLPALGYDTIYFNLEKETAEQEPTQSAATKIENEFYEIQLAANNS LTIHDKKAGRTYTDQMIFVENGDDGDSYNYSPPRKDLVISSKEAVVESIESSISSVNQ ALTISFKLNVPYNLEERANGEKNNEMIIKTVISLRKNEELIRFDVQIANQVLSHRLCV TFATEIASKFSTADQLFAPIKRPVRLPEMDVWEAEEWQEAPISIEAMQSFVSLHDESH GVAVMTEGVREYEIIGENYDTISLTLFRTFSHMGKTDLLYRPGRASGESIVATPDAQL LGEINATFALTLFESSFDEATIAKKAKEYLSNPQVYQMSDFLNGRLIYVYRDEEKTLD ATYSLALPTIDGAIISAVKKAEDSDAFITRFFNPYLQKELIIPEVFQGKERHLDESKS NEKQTTLKHAKVQSYLFEK" misc_feature 421469..424090 /locus_tag="lmo0401" /note="mannosylglycerate hydrolase; Region: PRK09819" /db_xref="CDD:182093" regulatory 424116..424121 /regulatory_class="ribosome_binding_site" gene 424130..426064 /locus_tag="lmo0402" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987748" CDS 424130..426064 /locus_tag="lmo0402" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional antiterminator BglG" /protein_id="NP_463932.1" /db_xref="GeneID:987748" /translation="MGYFAYKRLETLYGMLLDAGSHLSAQKLSQDLHISERTIRTDIA KLTEFLESHGATITLTRGAGYKIEILDPTVFQAFQAEKNKPKNADYFDLDNPEERVKY EIFLLLSSADYIKLEDLADTIFASRATISNDMKQVRKVIASYDLTLVSKPGSGVKIVG DEEKMRYALTALIASKNAPESYLESFFEWHKQKDKLQKLMTAVTDYFFATNIRFTDEA LQNLLLHMMILVERIEFGHTLEQFELTDVSEEEILIAAKLATILESLFEIEIADADKN YLLLQIASKRILNVEDKEISEFDDYAYIEGLLNRIESHYFYHLQDDMQLKKDLVAHIH SMLYRVKYHMTVKNPMTEHIKRYYPLAYEITLDAVESLKKDYPYDINQNELAYLALHI GASLERNYQISYYRHKSALIVCGSGFGTARIVEAKVKSAVSNLDITKVVSIQEYNRFI HIEEDIILSTVRIPEKNKPVIKISNIPTNEELKMLGAIIQEQTDPNRGFLSNFFTADF FERSSMTNKTAILEEMVDSLRQQNIVGEGFLQSVLEREKLGSTVLGTGIAIPHPLGLM AKETKIVIRILDKPIKWDQKQSVRAVFLLCISKNDYEEAINIYELLVELVREEYGEKL SRLSDFNAFTALANDILKKK" misc_feature 424172..426055 /locus_tag="lmo0402" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" regulatory 426179..426184 /regulatory_class="ribosome_binding_site" gene 426190..426606 /locus_tag="lmo0403" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987752" CDS 426190..426606 /locus_tag="lmo0403" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0403" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463933.1" /db_xref="GeneID:987752" /translation="MNRQTEFTLLIVGASLSILTFLGAMLYTIIFGLNTLMVADTFGY YSSSEETILLGIITFFSVVAAFFALGSAVFGFIGAFKVKSDGPKVKTLGVCFIVLGGL QVFTIHGILFLIAGILTITKKEYKTNSKEDEGTKWE" misc_feature 426193..426507 /locus_tag="lmo0403" /note="Protein of unknown function (DUF4064); Region: DUF4064; pfam13273" /db_xref="CDD:433076" regulatory 426584..426589 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0403" gene 426597..426995 /locus_tag="lmo0404" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987761" CDS 426597..426995 /locus_tag="lmo0404" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0404" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463934.1" /db_xref="GeneID:987761" /translation="MGMIAFLPIFFIFAMFLGLAAKALLAIWIYKDAEQRGMNAVLWC LLMVFINVIIILVIYLIVRNKGEVMKQNLGLLISGIGIAVLNTLMAIIAFIFIISFAV SDGGMHNMMDGYNYDYDDGYEYDMDNFEDF" regulatory 427008..427048 /regulatory_class="terminator" regulatory 427089..427094 /regulatory_class="ribosome_binding_site" gene 427104..428111 /locus_tag="lmo0405" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987767" CDS 427104..428111 /locus_tag="lmo0405" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphate transporter" /protein_id="NP_463935.1" /db_xref="GeneID:987767" /translation="MDTVILITVIIVIVGLAFDFINGFHDIANAVATSISTRALKPRV AIGIAAVMNFLGAISFTGVAESLTKSIVDPFSLNNGEFVVLCGLIAAVIWNLMTWLVG MPSSSSHALIGAIAGASIASASSFSVLNWSGFTTIIIALIISPIIGFTVGYLIYSLFK HLFHDKKLGKMNRRFRFIQIGTAAAQAYSHGTNDAQKTMGIITLALVASGLLKESAGI PFWVQVSCAASMAIGSSVGGYRIIKTVGTKIMKITPVTGVASDLSSLSVIMTATLIHL PVSTTQVIDSSIMGVGTANHKKEVNWRTGKNMVVTWFITLPLAGLLAAVVYWISAAIF L" misc_feature 427146..428105 /locus_tag="lmo0405" /note="Phosphate/sulfate permease [Inorganic ion transport and metabolism]; Region: PitA; COG0306" /db_xref="CDD:440075" regulatory 428114..428119 /regulatory_class="ribosome_binding_site" gene 428127..428507 /locus_tag="lmo0406" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987775" CDS 428127..428507 /locus_tag="lmo0406" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463936.1" /db_xref="GeneID:987775" /translation="MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFTSYFL TFEDGARLEIMSRTDVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEP RMTGDGYYESVVLDPEGNRIEITW" misc_feature 428130..428501 /locus_tag="lmo0406" /note="vicinal oxygen chelate (VOC) family protein similar to Bacillus subtilis YyaH; Region: VOC_BsYyaH; cd07241" /db_xref="CDD:319905" regulatory 428562..428567 /regulatory_class="ribosome_binding_site" gene 428576..428968 /locus_tag="lmo0407" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987777" CDS 428576..428968 /locus_tag="lmo0407" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0407" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463937.1" /db_xref="GeneID:987777" /translation="MDIVTNKIVVEKYNFETIVEENEQFENKIELEVHEVEPVNGNVE LMSKGKIFKITIPFLLVLENFRIDGRISRIIQLKDFFGDFSDLEAVDVEGLSNPLIDY IKRLTYDVTEIAFDEPGVSLDFNANHNS" misc_feature 428579..428947 /locus_tag="lmo0407" /note="Protein of unknown function (DUF1149); Region: DUF1149; pfam06619" /db_xref="CDD:429036" regulatory 428971..428976 /regulatory_class="ribosome_binding_site" gene 428981..429403 /locus_tag="lmo0408" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987782" CDS 428981..429403 /locus_tag="lmo0408" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0408" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463938.1" /db_xref="GeneID:987782" /translation="MRQYMKMVRPFDFVIIILLILGSFLPLILFSVAEAKHVGDDVVA IISQDGKVIREIPLTGHKGNEQFTIKGKGAQYNLMEVDGERIRIKEDNSPDQVGVKMG WKSKAGDTIVCLPHKVFVEIKSTNKKSKDPDTDLIVPN" misc_feature 428999..429373 /locus_tag="lmo0408" /note="Uncharacterized conserved protein [Function unknown]; Region: COG5341" /db_xref="CDD:444125" regulatory 429406..429436 /regulatory_class="terminator" gene 429630..432095 /locus_tag="lmo0409" /db_xref="GeneID:987787" CDS 429630..432095 /locus_tag="lmo0409" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_463939.1" /db_xref="GeneID:987787" /translation="MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAAPQVAPPAS INQIFPDADLAEGIRAELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLK FLNLNGNQITDLSPLSNLTKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRP LANLTQMYSLRLGGNSNISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLS DNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQ KLTSLHLANNQITNISMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVD VKIIGGLTNLTSLQLTQNHITDISPLANLTKIQYSDFSNQMITNLERNFSKTLSVPNN ITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFIT QPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWD FTTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDG WYDAETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEP TTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFTINNYQANFDIDGAVTE EVVNYDALIPEPTSPSKTGFTFEGWYDAEVGGTKWDFKTMKMPANDITLYAHFSKETP IIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAGENTTELATAKLPKTGDNA PWKTLFAGILLSSSAFYIWRKKA" misc_feature 429660..432086 /locus_tag="lmo0409" /note="class 1 internalin InlA; Region: internalin_A; NF033189" /db_xref="CDD:380193" misc_feature 429930..429995 /locus_tag="lmo0409" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 429996..430061 /locus_tag="lmo0409" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 430062..430262 /locus_tag="lmo0409" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 430128..430196 /locus_tag="lmo0409" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 430263..430328 /locus_tag="lmo0409" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 430329..430394 /locus_tag="lmo0409" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 430395..430460 /locus_tag="lmo0409" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 430461..430526 /locus_tag="lmo0409" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 430527..430592 /locus_tag="lmo0409" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 430593..430658 /locus_tag="lmo0409" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 430725..430781 /locus_tag="lmo0409" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 431427..431621 /locus_tag="lmo0409" /note="Listeria-Bacteroides repeat domain (List_Bact_rpt); Region: Flg_new; pfam09479" /db_xref="CDD:462813" regulatory 432104..432145 /regulatory_class="terminator" regulatory complement(432104..432134) /regulatory_class="terminator" gene complement(432143..433249) /locus_tag="lmo0410" /experiment="EXISTENCE:[PMID:19448609]" /pseudo /db_xref="GeneID:987792" misc_feature complement(432143..433249) /locus_tag="lmo0410" /note="phosphoenolpyruvate synthase, C-terminal" /pseudo gene complement(433153..434745) /locus_tag="lmo0411" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987794" CDS complement(433153..434745) /locus_tag="lmo0411" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of phosphoenolpyruvate from pyruvate" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate synthase" /protein_id="NP_463940.1" /db_xref="GeneID:987794" /translation="MKPYVLKFQEIQPHSEALVGGKGMNLGACSNIEGVHVPAGFCLT TEAYKRTLAENNEFTQLLQRLSSLKTSDMDAIREISETIRTLIQHTQIPSEITSDMDA ALLDVGGYEMPFAVRSSATAEDLPHTSFAGQHDTYLNIIGRDALLQHISMCWASLFTE RAIIYRIQNQFDHHKVQLAVVIQQMIFPEASGILFTADPITSNRKSLSIDASFGLGEA LVSGLVSADSYTVQENTITNKIIATKKLAIYSLKEGGTETCPLEKSQQTKQTLTDQQI LQLAKLGRKIEAYFGKPQDIEWCLAQGIFYIVQSRPITTLYPIPEVSEPGNRVYISVA HQQMMTDAMKPLGLSFYLMTTPATMYTAGGRLFVDITQSLSAKVSRDMMVNSLGQSDP LIKDALLTVINKKGFLPPLPTEENPNQAPISGKPPVRGIPDPSSVFELVQNSENSIKS LKQTIETKNGSDLFDFIVEDLEELKRVLFNPTSIDAIMAGMDASAWLNEHIYQWLGEK MSPINCQNQHQTILLHKWDLNY" misc_feature complement(<433222..434745) /locus_tag="lmo0411" /note="phosphoenolpyruvate synthase; Validated; Region: PRK06241" /db_xref="CDD:235751" regulatory complement(434754..434758) /regulatory_class="ribosome_binding_site" gene 434831..434929 /locus_tag="lmos17" /db_xref="GeneID:18245185" misc_RNA 434831..434929 /locus_tag="lmos17" /product="rli27" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245185" regulatory complement(434898..434937) /regulatory_class="terminator" gene complement(434945..435817) /locus_tag="lmo0412" /db_xref="GeneID:987812" CDS complement(434945..435817) /locus_tag="lmo0412" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0412" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463941.1" /db_xref="GeneID:987812" /translation="MTGLGTLLFLVGIGVLIFGLVSFRRKNWPRKKTQIIIISSILAI IIGVGIIPTTDEEASTEEPTKQQEKTEKVDNTPVLKAETTFTTDDEGTLVVEGKTNPG AEVTLDFVAIPDAVTTADENGAFSLSVNELDKAQDAVLSIVIDGQTKEQTLKLALTPA YETKIAEKAEAERVAAEKAEAERVERERVAAEEKRAADAKIAAEKKAEEARVAAEKKA AEEKRVAAERSKAAAAQPDTSNEQGQMVYITATGKRYHYDQNCRGLNNSNGETAVTVA QAKAQGLTLCKFEQ" misc_feature complement(<435185..>435427) /locus_tag="lmo0412" /note="cell envelope integrity inner membrane protein TolA; Provisional; Region: tolA; PRK09510" /db_xref="CDD:236545" regulatory complement(435827..435832) /regulatory_class="ribosome_binding_site" regulatory 436147..436152 /regulatory_class="ribosome_binding_site" gene 436161..436352 /locus_tag="lmo0413" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987816" CDS 436161..436352 /locus_tag="lmo0413" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0413" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463942.1" /db_xref="GeneID:987816" /translation="MAKPIEEIGEEIGAKVEKVARKTGNVAGTAAKLSVYSSIWAVKT GVNKTRAFAQGFKQGWSGK" regulatory 436365..436370 /regulatory_class="ribosome_binding_site" gene 436379..437188 /locus_tag="lmo0414" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987822" CDS 436379..437188 /locus_tag="lmo0414" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463943.1" /db_xref="GeneID:987822" /translation="MLNYLSSLNPVLLALLAGIFTWACTAAGASLVFFFKNLNKKWGN IMLGFAAGVMLAASFWSLLAPAIEMSKDLGKFSFVPALVGFLLGGIFLRVIDRIIPHL HFGFPEQAKEGPKTSLRKSILLVLSITIHNIPEGAAVGVAFGAVITGDTETLITAIVL ALGIGIQNFPEGAAVSIPLRGEGLSRGKSFWYGQLSAVVEPIFAVIGAVLVVFVTPIL PFALAFAAGAMIFVIVEELIPESQVEGSADLATAATMAGFAVMMVLDVALG" misc_feature 436400..437179 /locus_tag="lmo0414" /note="Zinc transporter ZupT [Inorganic ion transport and metabolism]; Region: ZupT; COG0428" /db_xref="CDD:440197" regulatory 437213..437255 /regulatory_class="terminator" regulatory 437468..437473 /regulatory_class="ribosome_binding_site" gene 437482..438882 /locus_tag="lmo0415" /db_xref="GeneID:987823" CDS 437482..438882 /locus_tag="lmo0415" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="endo-1,4-beta-xylanase" /protein_id="NP_463944.1" /db_xref="GeneID:987823" /translation="MKIRWIRLSLVAILIIAVVFIGVIGFQKYQFSKSRNKVIMQMDR LMKDQDGGNFRRLDKKENGVEIISYIPKTTEKKDNEIIQKEIGKATDAEVKKLNRDKE TQGIIFYTYQKHRMAEQAISYKAVQSEYVKEGRTKFVLKDKKDICKNIVTDAETGALL TLGEVLIKSNQTKLNLKTAVEEELIKTGDFSLKDVGNLGKIKSLVKWNQTDFEITNSE IILPVKIPGAPEPKKVKVKLADIASSVNKRYLPSSVKVPEVPKAKTNKRIALTFDDGP SSSVTPGVLDTLKRHNVKATFFVLGSSVIQNPGLVKRELEEGHQVGSHSWDHPQLTKQ STQEVYNQILKTQKAVFDQTGYFPTTMRPPYGAVNKQVAEEIGLPIIQWSVDTEDWKY RNAGIVTKKVLAGATDGAIVLMHDIHKTTAASLDTTLTKLKSQGYEFVTIDELYGEKL QIGKQYFDKTDSRMVK" misc_feature 438277..438816 /locus_tag="lmo0415" /note="Catalytic NodB homology domain of Clostridium thermocellum acetylxylan esterase and its bacterial homologs; Region: CE4_CtAXE_like; cd10954" /db_xref="CDD:200578" misc_feature order(438292..438303,438451..438468,438565..438567, 438571..438576,438628..438630,438646..438651, 438718..438720,438724..438726) /locus_tag="lmo0415" /note="NodB motif; other site" /db_xref="CDD:200578" misc_feature order(438298..438303,438451..438453,438463..438465, 438565..438579,438628..438630,438724..438726) /locus_tag="lmo0415" /note="active site" /db_xref="CDD:200578" regulatory 438889..438930 /regulatory_class="terminator" regulatory 438997..439003 /regulatory_class="ribosome_binding_site" gene 439009..439212 /locus_tag="lmo0416" /db_xref="GeneID:987824" CDS 439009..439212 /locus_tag="lmo0416" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_463945.1" /db_xref="GeneID:987824" /translation="MKVRNKVKQLREERGIGQNELALALEVSRQTIHAIEKGKYNPSL ELSLKMARYFRLTIEEIFQLEEN" misc_feature 439009..439206 /locus_tag="lmo0416" /note="DNA-binding transcriptional regulator, XRE-family HTH domain [Transcription]; Region: XRE; COG1476" /db_xref="CDD:441085" regulatory 439199..439204 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0416" gene 439214..439624 /locus_tag="lmo0417" /db_xref="GeneID:987835" CDS 439214..439624 /locus_tag="lmo0417" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0417" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463946.1" /db_xref="GeneID:987835" /translation="MKRYIINRGIMVAVVIIYMYPLLGIIKGEKIFGDIGTPIIMVIA ALIGTLSSVFLSEEKTKREYEKEKLEKDERYINNRKTFSYYLLIVLALTIPIVLIVLN LYGIEQISISSLTIIFLIFCFAYMIVLEIIRKKV" gene complement(439677..439976) /locus_tag="lmo0418" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987842" CDS complement(439677..439976) /locus_tag="lmo0418" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0418" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463947.1" /db_xref="GeneID:987842" /translation="MRSLDAVEILRRGETIERYKEGGNSMLPLIKSMQPVRLEPIGMR ELKVNDIVFCKVRGSFFTHKISKIRGKQYQISNNHKHVNGWITRNSIYGIVTKIW" regulatory complement(439983..439988) /regulatory_class="ribosome_binding_site" gene complement(440056..440610) /locus_tag="lmo0419" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987843" CDS complement(440056..440610) /locus_tag="lmo0419" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463948.1" /db_xref="GeneID:987843" /translation="MSKGRLEAFSDGVFAIIITIIVLGMTLPDVFTAASTQAFLWEIF IFIEGGLIIGQFWYSHSRLFDQVTFISTSAVLFNILFLLVLSLIPLFTRAIMQHPDMT APIIGFVITILITSVIFQLLHHAVNGKDSGIDNWKFRISSFIFVIALGIISFFAPQIS TILFIIFPIAGWIIQLTNRRQPPK" misc_feature complement(440071..440610) /locus_tag="lmo0419" /note="Uncharacterized membrane protein [Function unknown]; Region: COG3548" /db_xref="CDD:442769" regulatory complement(440620..440625) /regulatory_class="ribosome_binding_site" regulatory 440744..440749 /regulatory_class="ribosome_binding_site" gene 440758..441570 /locus_tag="lmo0420" /db_xref="GeneID:987845" CDS 440758..441570 /locus_tag="lmo0420" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463949.1" /db_xref="GeneID:987845" /translation="MIRAISVDMDGTFLDGNGEYDRARFEKIYAELMKRGIKFIVASG NQYYQLKSFFPGKDEELFYVAENGAVIFHQGELRSVNRFDERLVQKILWTLIQDYHDL QVILCGVKSAYLLKAADPDFKAFAKKYYFELQEVESFDVLPDDTFIKFALDVEVAKTG QIVEDLNQTFVGEIRAVSSGHGSIDIIIPGVTKGNAIQQLLNEWQVAPEDLLAFGDAN NDIEMLQLTSNSYAMLESSPEVLAAAKHVAPSNKEAGVLQVIEEYMKKSQRF" misc_feature 440764..441540 /locus_tag="lmo0420" /note="Escherichia coli YbiV sugar phosphatase/phosphotransferase and related proteins; belongs to the haloacid dehalogenase-like superfamily; Region: HAD_YbiV-Like; cd07518" /db_xref="CDD:319820" misc_feature order(440779..440793,440884..440892,440953..440955, 441202..441204,441208..441210,441310..441312, 441334..441336,441400..441408,441412..441417) /locus_tag="lmo0420" /note="active site" /db_xref="CDD:319820" regulatory complement(441557..441583) /regulatory_class="terminator" gene complement(441622..442872) /locus_tag="lmo0421" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987848" CDS complement(441622..442872) /locus_tag="lmo0421" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="rod shape-determining protein RodA" /protein_id="NP_463950.1" /db_xref="GeneID:987848" /translation="MSSSTFEEYLGKVIANVKSKQAHSMIKKELSNHLEELSHSFQKR GLSIEDANKKAMQEMGDPSTVGRNMNQLHKPRMDWLLIALFILLAGISFLPIIGDVVA SNSSFMKKQIVWLAIAVLALIGFLFFDYRKLKDLWMYFYAAALILFFTTFLVGIPLTG GGRWMSLWGIAIDSPAISLFLFFIAWAGIFTNANAFKGWKKLVMLLILFWLPVIFYTM LPQFVFSIMYFLCVLVMYIFYYRHNRFAIKVALGNLLVGVIFISTMILKYPSSYLPDT SIPLKDILSKAGWFGKGLHNNLILPEAHTDFVFPFLVYSLGWVFGIFLCLLLVVFILR ISRNAFKTKDLFGRLLTIGGAILFTVPACWNILMGLGIVPIMVVPLPFISYGGSMLLV YAALLGLILNVYRRKDIVESTLVN" misc_feature complement(442663..442821) /locus_tag="lmo0421" /note="permease prefix domain 1; Region: perm_prefix_1; NF038403" /db_xref="CDD:468503" misc_feature complement(441637..442566) /locus_tag="lmo0421" /note="Peptodoglycan polymerase FtsW/RodA/SpoVE [Cell cycle control, cell division, chromosome partitioning]; Region: FtsW; COG0772" /db_xref="CDD:440535" gene complement(442869..443300) /gene="lstR" /locus_tag="lmo0422" /db_xref="GeneID:987850" CDS complement(442869..443300) /gene="lstR" /locus_tag="lmo0422" /experiment="EXISTENCE:[PMID:19448609]" /note="part of sigC operon that is induced by temperature upshift" /codon_start=1 /transl_table=11 /product="lineage-specific thermal regulator protein" /protein_id="NP_463951.1" /db_xref="GeneID:987850" /translation="MDDPFYNLKDSIKKDFESFSFSEERKNAVKKTIRKKQSHLELHS WKIETLQNILDALQDEAKHGYEISTQLFQKNELSFKNNEGQLYILLHLLENKKILSSK WIEGKKYYSLTAKGKKFVATFELRDSKQHGSLKNLIEEASL" misc_feature complement(442881..443300) /gene="lstR" /locus_tag="lmo0422" /note="PadR family transcriptional regulator; Region: lstR; PRK09416" /db_xref="CDD:181836" regulatory complement(442880..442885) /regulatory_class="ribosome_binding_site" /gene="lstR" /locus_tag="lmo0422" gene complement(443303..443851) /locus_tag="lmo0423" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987863" CDS complement(443303..443851) /locus_tag="lmo0423" /experiment="EXISTENCE:[PMID:19448609]" /note="part of sigC operon induced by temperature upshift" /codon_start=1 /transl_table=11 /product="RNA polymerase factor sigma C" /protein_id="NP_463952.1" /db_xref="GeneID:987863" /translation="MTELEEIGIHINSIENTEQIISQLMDNYSDDVLHLVFSYVKNRT TAEDLTQEIFIKCYEKLDQFNNKSSIKTWLYRIAINHCKDYLGSWHYRKLNFNDKIWD YLPSKSKHVEEEVIAKDVANSLMSAVMDLPVKYREVVFLHYYEELPLANISKITGVNS NTLKTRLKQARELLKNKMKKEV" misc_feature complement(443306..443842) /locus_tag="lmo0423" /note="RNA polymerase factor sigma C; Reviewed; Region: PRK09415" /db_xref="CDD:181835" regulatory complement(443308..443313) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0423" regulatory complement(443862..443867) /regulatory_class="ribosome_binding_site" regulatory complement(443979..444019) /regulatory_class="terminator" gene complement(444031..444888) /locus_tag="lmo0424" /db_xref="GeneID:987866" CDS complement(444031..444888) /locus_tag="lmo0424" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glucose uptake protein" /protein_id="NP_463953.1" /db_xref="GeneID:987866" /translation="MSIYLIALLPVLGWGFMPIIANLRKSTPEEQLLGTSISALLFAL ILFWILSPEITVLSFIVSFISGIFWSFGQLLQFKGIAASSVAKAMPISNGTQLVGATL FAVLVFREWQTVTAVIIGVVAVILILIGVVMTGFQKRGNHITESVSFHVYGIVILSSF FLTLYVVTNQLFDVTGFSIILPQAIGMLTCAIGINLAKKTAISRKNVTFNLMTGLSWS IANLGMFLATAVLGVATSFSISQACVIVATIGGILIFKQKKSPLEWTFILSGILLIMV GVVFLSLLK" misc_feature complement(444037..444876) /locus_tag="lmo0424" /note="Sugar transport protein; Region: Sugar_transport; pfam06800" /db_xref="CDD:429127" regulatory complement(444896..444901) /regulatory_class="ribosome_binding_site" regulatory 445036..445041 /regulatory_class="ribosome_binding_site" gene 445049..447010 /locus_tag="lmo0425" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987867" CDS 445049..447010 /locus_tag="lmo0425" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional antiterminator BglG" /protein_id="NP_463954.1" /db_xref="GeneID:987867" /translation="MKAVTKMIANREKNIIQFLMKTGQTRVGTIANHLGLSEKTVSNS LKEIDVFLKDFDMTVVRKPKIGVYIEGDNKAFAEVSRFLDNQVSQIPSTKEERVIYIF SKLLKADDYITIHQLADELYISRSTIEKNMVEVTKMLEKEGITLYKKPSKGMKLLISE REKRALTSKFITNFWGNNWYLKQEGEKVLQAFDTIQADVTGIFPEEGLKEIIAIVQEF SERHDFTFTDYAFQSIVIHLAIAVERIREGEYVENVESDPMKDVFESQRNNTEILVGM LEERLDIKIPAFEVGYIQLHLTAAYNQQHDELLVNTPPQEDDVADFVSRCLAEGNYDK GLLEDLTTHMKSAINRLKLGMHFKNPYLSKIKQNFPQAFEEALYFKAKFEQKYDVQVN EDETAYIALHFEAYKERSRSFPDQIRVVLVCSTGLGSSRLLAARIKKYFPMITIEKIL SVQALMETEVDVDLVISTIYLELEDIPSIVVSPMMSKADLQQVESQIERTRRKKKKRS QPFVDLIKPKTIFAKLDVATMEEAIAEIGDKLVEQGIAKPGIVESALKREALSFTSFE EMATPHAEPALINESRIAIATLKHPVKWGLVDVDKIFFIALTEQNGINLDAMYEQFYK YIDNKKWLEKLTQLKSAAEIYEHLLKDGM" misc_feature 445091..446998 /locus_tag="lmo0425" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" regulatory 446997..447002 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0425" gene 447010..447474 /locus_tag="lmo0426" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987869" CDS 447010..447474 /locus_tag="lmo0426" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIA" /protein_id="NP_463955.1" /db_xref="GeneID:987869" /translation="MEVKDILTKELVVFDLEATTKETAIEEMAEMLDERGILADKATY VQAVLEREAHSTTGIGNNIAIPHGKSESVTKSAIVFARTKEMIEWESLDDEPVNMIFL LAITDSDKTDGHLKILAEIATKLMDDDIVESLKNTRDKEEVIRILNGGVVEI" misc_feature 447010..447453 /locus_tag="lmo0426" /note="Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) [Carbohydrate transport and metabolism, Signal transduction mechanisms]; Region: PtsN; COG1762" /db_xref="CDD:441368" regulatory 447453..447458 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0426" gene 447471..447791 /locus_tag="lmo0427" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984685" CDS 447471..447791 /locus_tag="lmo0427" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIB" /protein_id="NP_463956.1" /db_xref="GeneID:984685" /translation="MKRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGAT GIENELTEKDVNIGEVVIFAVDTKVRNKERFDGKVVLEVPVSAPIKDAEKVINAALAL IDEK" misc_feature 447480..447773 /locus_tag="lmo0427" /note="Phosphotransferase system fructose-specific component IIB [Carbohydrate transport and metabolism]; Region: FrwB; COG1445" /db_xref="CDD:441054" regulatory 447791..447796 /regulatory_class="ribosome_binding_site" gene 447804..448910 /locus_tag="lmo0428" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984384" CDS 447804..448910 /locus_tag="lmo0428" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIC" /protein_id="NP_463957.1" /db_xref="GeneID:984384" /translation="MFRKIGSELKKHVLTGISYMIPLVIAGAVIMAIARVGGSFFGIT DIWDAKYADSANSLISLLHSLDGFGGLALGMMFPVIAAFIGYSIADKLALAPGLVGGL LARDIGAGFLGALAAGLIAGYTCLLIKKYVKLPKAAASIVPVFLVPVFGTLITVLIIN YVVGIPFADLNTALENWLNGMSGSNQIMMAAIIGAMVGFDLGGPVNKAAVTTAMALLT SGIYAPNTAAQVAIIIPPLGLGLATLIAKRKYNTEMREAGKSSLIMGLVGISEGAIPF AVESPLKVIPATVLGSAVGGALAVGLGAINQAPISGFYGWFTVENWPVYILAIAVGTL IVAGMSVALRKASAGEEMVGSSYDDEIDEAEWEA" misc_feature <447813..448862 /locus_tag="lmo0428" /note="Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism]; Region: FrwC; COG1299" /db_xref="CDD:440910" regulatory 448915..448920 /regulatory_class="ribosome_binding_site" gene 448926..451508 /locus_tag="lmo0429" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985137" CDS 448926..451508 /locus_tag="lmo0429" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar hydrolase" /protein_id="NP_463958.1" /db_xref="GeneID:985137" /translation="MVKAHIVNHTHWDREWYFTSADALVLSEQLFTEVIDELKKHPEA NFVLDGQLSILDDYVALYPEKLADIKQLIADKQLFIGPWFTQTDAFFAHGESILRNAM IGIFDSKKYGDYMKIGYLPDTFGFNAQMPTLLEHAGFDNVIFWRGIHLGEHVASPYFK WQGLGEEASIYAINMPQGYGTGMLLEPTSAYVDGRLDPAIDFIEKYSKTTEVLIPSGN DQLNIISNFAEKLAEINKMGRHDYQLSTYQDFIQYVRELPDLEKYRGEFRSPVLARVH KTIGSSRMNIKLKSASLEQKLLTRIEPLLVIAKASGISISERLLMYTWKKLLEGQAHD SLAGCVSDPVAEDILHRMKEADELCDSIENTIVKKIADDLALAANEIIIFNTDLHDFD GFKEIQVVTEHKKIHFPAFPDATIVQEEFIPSRENVLEETPAGNRFIEEPGYYVLQVR VKVELPGLGYRVIAFEENDRELDGMVASNNATIQNESYKITFQDGEILLQKPNGERLT SFITLEDDVNAGDTYDYSPLAGDVAELFTFSAANTEKSSEVERLILTGKSDFPLDRLT KEGHGNLQIKLILEVKKGSELLDVKVEVDNQIKNHRLRLKVNTGVKTDYNIASLPFGY IERKPVVPANWRETYSEMPIDIEPLEQSVTLTNETASCTVFTCGVKEYQQLDQDLALT LLATTGQLGKPDLAYRPGRASGDTTKKGHVLIETEGAQLLGKHQFRLAIYLGDQAFDE HKTAERTKTFNQANVSYQRQPFNHFLHRLDNKIQKTERKLGAKQTLAMLNLPKEYLVS ACHPSYYTADKYIIRLENPTNTPQKLAFPDMSFEYVNAIEEVVANDNNTIPAYGAVTL RLDI" misc_feature 448926..451499 /locus_tag="lmo0429" /note="Alpha-mannosidase [Carbohydrate transport and metabolism]; Region: MngB; COG0383" /db_xref="CDD:440152" regulatory complement(451508..451546) /regulatory_class="terminator" regulatory 451517..451555 /regulatory_class="terminator" gene complement(451531..452406) /locus_tag="lmo0430" /db_xref="GeneID:986731" CDS complement(451531..452406) /locus_tag="lmo0430" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="NP_463959.1" /db_xref="GeneID:986731" /translation="MELRVLNYFLTVAREKTISRAADVLHLSQPTLSKQLKELEEELG VTLFIRGNRSITLTEDGLYLANRGKEILSLVELTTSNLLQNETISGKIMVGAAETRGF EFIGSLLHELREKHPDITFQLHSGNADDVLEKIEHGLLDFGLVINPVEKLQYDYLPLT IEDTWGILVNTKHPLAKKTVVTPSDIEANPIVVSNQSFIDNQLASWLGGHFEQLNVIG RYNLLYNASLLAKENIASILCIDGIINTENTNLKFIPFSPPLTAGLSIVWKKNQTFSS ASKEFLRLIQKTCSK" misc_feature complement(<451855..452406) /locus_tag="lmo0430" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" misc_feature complement(451552..452127) /locus_tag="lmo0430" /note="The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_LTTR_substrate; cd05466" /db_xref="CDD:176102" misc_feature complement(order(451711..451716,451720..451725, 451741..451758,452032..452052,452056..452058, 452068..452070,452077..452082,452086..452091)) /locus_tag="lmo0430" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176102" regulatory complement(452412..452417) /regulatory_class="ribosome_binding_site" regulatory 452510..452515 /regulatory_class="ribosome_binding_site" gene 452524..453093 /locus_tag="lmo0431" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986199" CDS 452524..453093 /locus_tag="lmo0431" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_463960.1" /db_xref="GeneID:986199" /translation="MIEQDLQNRLVDQEILHGSDLLDEIHEVKQNNEQLIIELNTKYH TKKEVTKYLSDITGKPVDPSVDVSLPFYSDFGKHITFGKNIFINLNVTFVDLGGITIE DNVLIGPGARLVTVNHLVSPKKRRGLRVAPICVKKNAWIGANTTILSGVTIGENAIVA ADATVTKDVPPNVIVAGSPAKQIRKIIEE" misc_feature 452590..453072 /locus_tag="lmo0431" /note="Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes...; Region: LbetaH; cl00160" /db_xref="CDD:469633" misc_feature order(452779..452781,452785..452787,452797..452799, 452803..452805,452839..452841,452857..452859, 452863..452865,452941..452943,452956..452961, 452965..452967,452995..452997,453007..453009, 453013..453015,453019..453021) /locus_tag="lmo0431" /note="putative trimer interface [polypeptide binding]; other site" /db_xref="CDD:100047" misc_feature order(452941..452943,452947..452952,452965..452967, 453001..453003,453019..453021) /locus_tag="lmo0431" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:100047" regulatory 453093..453098 /regulatory_class="ribosome_binding_site" gene 453107..453853 /locus_tag="lmo0432" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985147" CDS 453107..453853 /locus_tag="lmo0432" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_463961.1" /db_xref="GeneID:985147" /translation="MTIKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEK IVQTIKANSGEAIFAKTDVTKREDNKKLVELAIERYGKVDAIFLNAGIMPNSPLSALK EDEWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWA VRDLMEVLRMESAQEGTNIRTVTIYPAAINTELLETITDKETEQGMTSLYKQYGITPD RIASIVAYAIDQPEDVNVNEFTVGPTSQPW" misc_feature 453107..453841 /locus_tag="lmo0432" /note="NADP-dependent 3-hydroxy acid dehydrogenase YdfG [Energy production and conversion]; Region: YdfG; COG4221" /db_xref="CDD:443365" regulatory 453864..453903 /regulatory_class="terminator" gene 454534..456936 /gene="inlA" /locus_tag="lmo0433" /db_xref="GeneID:985151" CDS 454534..456936 /gene="inlA" /locus_tag="lmo0433" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin A" /protein_id="NP_463962.1" /db_xref="GeneID:985151" /translation="MRKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPI NQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQ INFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPL KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLT DLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGH NQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDG GSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAIFNVKFHVDGKE TTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSIN SYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPA KNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDG KKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPTTNNGGNTTPPSANIPGSDTS NTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLLLGLLAVGTAMALTKKARA SK" misc_feature 454537..456933 /gene="inlA" /locus_tag="lmo0433" /note="class 1 internalin InlA; Region: internalin_A; NF033189" /db_xref="CDD:380193" misc_feature 454831..454896 /gene="inlA" /locus_tag="lmo0433" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 454897..454962 /gene="inlA" /locus_tag="lmo0433" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 454963..455028 /gene="inlA" /locus_tag="lmo0433" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 455029..455157 /gene="inlA" /locus_tag="lmo0433" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 455158..455223 /gene="inlA" /locus_tag="lmo0433" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 455224..455289 /gene="inlA" /locus_tag="lmo0433" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 455290..455355 /gene="inlA" /locus_tag="lmo0433" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 455356..455421 /gene="inlA" /locus_tag="lmo0433" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 455422..455487 /gene="inlA" /locus_tag="lmo0433" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 455488..455556 /gene="inlA" /locus_tag="lmo0433" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 455557..455619 /gene="inlA" /locus_tag="lmo0433" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 455620..455679 /gene="inlA" /locus_tag="lmo0433" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 455686..455751 /gene="inlA" /locus_tag="lmo0433" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" regulatory 456951..456991 /regulatory_class="terminator" regulatory 457008..457013 /regulatory_class="ribosome_binding_site" gene 457021..458913 /gene="inlB" /locus_tag="lmo0434" /db_xref="GeneID:986892" CDS 457021..458913 /gene="inlB" /locus_tag="lmo0434" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin B" /protein_id="NP_463963.1" /db_xref="GeneID:986892" /translation="MKEKHNPRRKYCLISGLAIIFSLWIIIGNGAKVQAETITVPTPI KQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTK LFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGL VHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKN HISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDG DYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLKEVYTVSYDVDGTVI KTKVEAGTRITAPKPPTKQGYVFKGWYTEKNGGHEWNFNTDYMSGNDFTLYAVFKAET TEKAVNLTRYVKYIRGNAGIYKLPREDNSLKQGTLASHRCKALTVDREARNGGKLWYR LKNIGWTKAENLSLDRYDKMEYDKGVTAYARVRNASGNSVWTKPYNTAGAKHVNKLSV YQGKNMRILREAKTPITTWYQFSIGGKVIGWVDTRALNTFYKQSMEKPTRLTRYVSAN KAGESYYKVPVADNPVKRGTLAKYKNQKLIVDCQATIEGQLWYRIRTSSTFIGWTKAA NLRAQK" misc_feature 457045..457194 /gene="inlB" /locus_tag="lmo0434" /note="Bacterial adhesion/invasion protein N terminal; Region: Internalin_N; pfam12354" /db_xref="CDD:289150" misc_feature <457240..457908 /gene="inlB" /locus_tag="lmo0434" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 457318..457383 /gene="inlB" /locus_tag="lmo0434" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 457384..457515 /gene="inlB" /locus_tag="lmo0434" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 457516..457581 /gene="inlB" /locus_tag="lmo0434" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 457582..457647 /gene="inlB" /locus_tag="lmo0434" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 457648..457713 /gene="inlB" /locus_tag="lmo0434" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 457987..458181 /gene="inlB" /locus_tag="lmo0434" /note="Listeria-Bacteroides repeat domain (List_Bact_rpt); Region: Flg_new; pfam09479" /db_xref="CDD:462813" misc_feature 458191..458415 /gene="inlB" /locus_tag="lmo0434" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 458422..458664 /gene="inlB" /locus_tag="lmo0434" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 458665..458898 /gene="inlB" /locus_tag="lmo0434" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" regulatory 458933..458963 /regulatory_class="terminator" gene 459681..465722 /locus_tag="lmo0435" /db_xref="GeneID:985154" CDS 459681..465722 /locus_tag="lmo0435" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan binding protein" /protein_id="NP_463964.1" /db_xref="GeneID:985154" /translation="MIRKIFIGILSFTILIQTVIVSNFNVVYATTEEHKQEAIKLEKK STNNNIICIKGAVKDKEYKLSLPKSFNLDEKKTGKEVEYNKEKNELTIIGTGEEITLY LLASQTGKYELELKEGDKVQAKLDLIIKNVDEEVAKTVEKSNRQLLRSSISDKLFLQA DSSKATLANYTEQITFNYSINFLDGSTNLKNGKLVIDFNNSNLELVNYPKDTAANRNI KLTSYSALTGKLTINLVDNISSGAPFDIPIVVRAGYGAKPGLPMNLKATLSGENSSGG TYTPSEKTTTVNLEESSSNQDYSPITAGDNSWAFNLKELSYSLKPGGYTIQWPEIQKK SLENKSFKNLKLEYLKENGGDVISVNTADPYVIRFGEPFWSQLSTVNGKANVLVNDDE KQVVEYGPINANIYQKIQVSMAAKIPADGVEGTEYTGTVNVYDEDVFITSIKIKAEVA DSATSIAVDSKVSKTSISEGDIFEWGFMPRVSSAAPGVNDLEIVAPIPEGIKALSYIP NNNSMASIKKLEYYQNGKWVSMAPQTSSGWDFSKIDQSVNRIEKLKLTSRDGIINDKD MPPYTHGTIRMQNIGVKAGESFTLRPESITYTDPDKTSKTIDTTTNSYGKNVQVVEKT SAPAKINGEVFLSSTAGTSGKGFGSTIFFNGDKIAQSVRLGSYGSKLENPYIFVVVPK GIDLETMRNFIQQPYRSTLNYTYAPANGTNTLYPKSSADVKGKETLSDGSTLYYWEAP DTGLAPGMENCEMLALDLVLKLNKANSGANKVEFGMGSMTDSSWNLNGAANSGLETKE LSSELQSKLPGVTSTKYLSTTRTANIGVSNSIATKMKIKGSQDNDFVDVSANTGTTIP GKRVDYNLTFENNGTRSMKNLEIIDILPHKDDQYVLGTGPRGSKFSVIPTSEIEVLVN GKKSDSATLEYSTSYTPERFDTNGEDVAGDSWQIVAPTNMADVKSFRIKLPNTEFKVG DEITLNFEAIVPTDAPRNDEIAYNSIAYRIDKETGSGTSKLASEPPRGGVKSTNPSTD LNIAGNSFSDLNKNGVKDADELGLNAVKLDLYKKNNNEFEKVETVYTSSDALDKEKGL FDFNGLNNGTYKIAAHLPNKNADFITTGPNKIVKDSKDDSIGWITVNNSTEFTIDDLA NGNPKNLVGIQIPIYMATPIKGAVVFVNKDGEPKITSYGQDYEIALFDKDGKEVQSAI KTNSKGEFSFNDVAIKNPADFKLKVTAPTGTNFVYSAKNPLFNMSTKEYTLNSVVPGV GGVAEIYITETSKPTTKIILDKAVTPNAITIESSDEATEVTNEWTLEDSDGTVVYTGT GNTIRIPNDEGTYIAKNTATDEAGNTASDEKTFDIDYTVPTLTVNQDASAEVNSTEAN IGWIKPLNVAATDTHDGNITPVVDYSKVKWDVLGTYPVTVTATDASGNKATQTVNLRI VDTTSPTILITNNPLTYSIENMRKLTEQELYTAAGLIGGDNYDLAPGQAVQPNKQPMV FTSNFSTIFGDIASVKAGQYQVQVNLADSSGNQAIPQTITINVVDTVGPVIKADNVSY HVNTTKTEAEFFQDARLDVTDNNDDTTDLIITSNFAEKVNLNKPGKYEVTITATDTKG NQTTKEITVQVSKDKPVITADPKISYQGKIEVTEANFLSGVHAEVTDELDGDVKITSD FAEKVDFNKVGTYTVTLNAKDEYGNTAEPVKVSVSIFNKIAPTFNNADNKTIEAVNEL PSLESIFKIEAKDYLSGNKLKVTYTPEQTIKGNVPGEYSIKVTTKDDSGNIAETTVTL TIKDTTGPSIKMTKSTKKLEVQSKEPNWITFFGIKATDIVDGDVTKNIKVDSSEVNLN KVGTYPIYFTVTDALGNESSKLKSTVQIVDTSSPELTIDKLEISYPTGKTISDKQFLQ DIGTKVTNSYGTVKVTTNLSKIVDWNKAGKYKVTVTATNSSGGVAEKTILLTVKNSDS SFIAVPSKDDNKNKPAKNIPKTGDTLNTELIVMGMMLLLVGGWMFLRRKTKVKTK" misc_feature 462792..>463058 /locus_tag="lmo0435" /note="SdrD B-like domain; Region: SdrD_B; pfam17210" /db_xref="CDD:435789" misc_feature 463692..464792 /locus_tag="lmo0435" /note="S-layer protein MJ0795, predicted component of type IV pili-like system [General function prediction only]; Region: MJ0795; COG1361" /db_xref="CDD:440972" misc_feature 464214..464468 /locus_tag="lmo0435" /note="LapB C-terminal region repeat; Region: LapB_rpt_80; NF033932" /db_xref="CDD:468252" misc_feature 464556..464792 /locus_tag="lmo0435" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature 464715..464951 /locus_tag="lmo0435" /note="LapB C-terminal region repeat; Region: LapB_rpt_80; NF033932" /db_xref="CDD:468252" misc_feature <465129..465269 /locus_tag="lmo0435" /note="Domain of unknown function (DUF5011); Region: DUF5011; pfam16403" /db_xref="CDD:435320" misc_feature 465213..465464 /locus_tag="lmo0435" /note="LapB C-terminal region repeat; Region: LapB_rpt_80; NF033932" /db_xref="CDD:468252" misc_feature 465612..465707 /locus_tag="lmo0435" /note="LPXTG-motif cell wall anchor domain; Region: LPXTG_anchor; TIGR01167" /db_xref="CDD:273478" regulatory 465757..465792 /regulatory_class="terminator" regulatory complement(465864..465917) /regulatory_class="terminator" gene complement(465934..466419) /locus_tag="lmo0436" /db_xref="GeneID:986537" CDS complement(465934..466419) /locus_tag="lmo0436" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463965.1" /db_xref="GeneID:986537" /translation="MKGLKKMKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTN PANIRRIMSNLKKANLITTQTGKANPILTKPPEEISLLDVYKSIEGNTNLIHVDPKTN PDCIVGANIQQVLSSKYELLQQKIELEMDEIKLDSIIHDISVLESKDRPQNNEFITKF L" misc_feature complement(465997..466395) /locus_tag="lmo0436" /note="Iron-dependent Transcriptional regulator; Region: Rrf2; pfam02082" /db_xref="CDD:396591" regulatory complement(466424..466429) /regulatory_class="ribosome_binding_site" regulatory 466504..466509 /regulatory_class="ribosome_binding_site" gene 466517..467362 /locus_tag="lmo0437" /db_xref="GeneID:985156" CDS 466517..467362 /locus_tag="lmo0437" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463966.1" /db_xref="GeneID:985156" /translation="MTYLVTGATGGLGGYALNYLKELVPMSDIYALVRSKEKGADLKA AGFNIRVGDYSDAESMKQAFAGIDRVLFVSGAPGNRQVEHENVINAAKKAGVSYIAYT SFAGADKSTSALAEDHFFTEKVIEKSGIAHTFLRNNWYFENEMPMIGGALSAGKFVYA AENGKVGWALKREYAEVAAKAVAGAGFPEILELSGPLMTYEELTKALKEATGKDFDVI SSDDKGFVENLVSVGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALGKPLTNRVDAL RELLK" misc_feature 466523..467326 /locus_tag="lmo0437" /note="triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs; Region: TMR_SDR_a; cd05269" /db_xref="CDD:187578" misc_feature order(466535..466537,466541..466552,466616..466621, 466628..466630,466670..466681,466733..466744, 466928..466936,467027..467029) /locus_tag="lmo0437" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:187578" regulatory 467371..467408 /regulatory_class="terminator" regulatory 467506..467511 /regulatory_class="ribosome_binding_site" gene 467519..468136 /locus_tag="lmo0438" /db_xref="GeneID:985161" CDS 467519..468136 /locus_tag="lmo0438" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0438" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463967.1" /db_xref="GeneID:985161" /translation="MKKLVAWFNGLSKMWKVVVIIGAVFVVIIALTTGEDEGEQTKTK KDSNKVVKTASRPKLSTKDLALIKADLAEFEARELSSEKILKDTIKEESWSDLDFAND NINQMIGTMKRYQQEILSIDAIKRSSEASADTEAFKKIFKEWSEFKIERIQVTIDLLN GKKDSEAVFKKTYPNQIIFKKVRTNKLQTALNNLKVGYELLDSQK" regulatory complement(468132..468162) /regulatory_class="terminator" regulatory 468143..468173 /regulatory_class="terminator" gene complement(468169..469437) /locus_tag="lmo0439" /db_xref="GeneID:985164" CDS complement(468169..469437) /locus_tag="lmo0439" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463968.1" /db_xref="GeneID:985164" /translation="MVKITKYPAEPSDVKHYISGEKMKNDHHLHTVLTFDNHLNIDVL KRAVMQSTQKLPLLLCHFKETKKGAFWQESVFSAEDLVFLVETQAPETEVDRALVTKL STENGPQICFTVVRTESTDQLVIIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAAK LSLGSRSLKQVFDQLSRKEIKSIFTEKTKQKAVHNPTLPLKGDPKNPKIIWTKLPKEN FSQILHYAKEHDATVNDVLFATMVRTVLQTTGQHEISIDCPVDLRKYLPSKTSSGITN LTANITCQISTDDDLTSFESTLQAVKKSLDPQKNSLAPLRIYYLLELIFKKKSYISAK KASGKMYSIPKTSFTNIGIIDEEKLVFEGSALTDCFICGSLKYAPFFQVAATTFRGEL TLSTNLHGTMQDHAWQKEFLEKMISEFSSK" misc_feature complement(468736..469377) /locus_tag="lmo0439" /note="Uncharacterized conserved protein, contains a NRPS condensation (elongation) domain [General function prediction only]; Region: COG4908" /db_xref="CDD:443936" regulatory complement(469445..469450) /regulatory_class="ribosome_binding_site" regulatory 469561..469566 /regulatory_class="ribosome_binding_site" gene 469575..470078 /locus_tag="lmo0440" /db_xref="GeneID:985165" CDS 469575..470078 /locus_tag="lmo0440" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0440" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463969.1" /db_xref="GeneID:985165" /translation="MTNRTLTTKLLGTLSYTQENGTMMDAVIPLDGKEVKVDYSIFEK LTSEDYFKDIVTLTDQIPELHLKAKKTILEQFDGNDTLTIYFDFHTDELPKEVLEVTE CDALENVTKEILIDKLVLSGVWFSENANNELDLTFDFKLLPEVSDELLVVRFNTNGEI TELTHES" misc_feature 469761..470075 /locus_tag="lmo0440" /note="Protein of unknown function (DUF2004); Region: DUF2004; pfam09406" /db_xref="CDD:430589" regulatory complement(470075..470115) /regulatory_class="terminator" regulatory 470088..470126 /regulatory_class="terminator" gene complement(470122..472158) /locus_tag="lmo0441" /db_xref="GeneID:985168" CDS complement(470122..472158) /locus_tag="lmo0441" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase" /protein_id="NP_463970.1" /db_xref="GeneID:985168" /translation="MASYGGKKRNNKKAIIIGSIVAIVVLAGIAIYFFIQNQHKDEKN ALAAAETFTSNIAKEKYDKLGGSVSSESLKKVEFTKKEMEDKYQAVYDGIGAKNIKVK NLKSVYDDKENKFNLTYELEMRTSLGKLATQKYKTTISKQDDDWKIDWKPALIFPGMV KTDKVRITEDDAERGQIVDRNGNPLATTGQFAEAGVVPSKLGEGDEKVKNIADISKKL EVSTDYINKQLDQKWVQADSFVPLVTLNKDNLPEATGLTYAQKEMRTYPLNEATSHLI GYVGEVSAEDIEKNPKLSVGDVIGKSGLERYYDKQLRGKNGGAIKIINDQTKQEDTLQ KIDKKDGEEIKLTIDAAVQKKAFDSLGSETGAVTMINPTNGELLALVSTPSYDANQMV LGITSEDYAKYNDDKRLPFLARYANRYAPGSTFKTITATIGLDTGITKPDKVREISGL QWQKDASWGKYFVTRVHDVPKVNMTDALVHSDNIYFAQEGLEIGKDKLTAGLKKFDFD KEYNLPFTMKPAQISNDGLNSEILLADTSYGQGELLMSPIQQAIAYSAIANDGKMPYP KLDTKEKAGKETQATEAKSANQVKAALVKTVSDPAGTAHALEIQGHSIAAKTGTAELK EKQGEDGLENGFVYAFDADNPNYLMVGMIENVKGRGGSGLVIDKLKPVIESMYK" misc_feature complement(<471970..472158) /locus_tag="lmo0441" /note="Flagellar basal body-associated protein FliL [Cell motility]; Region: FliL; COG1580" /db_xref="CDD:441188" misc_feature complement(471670..472029) /locus_tag="lmo0441" /note="NTF2-like N-terminal transpeptidase domain; Region: MecA_N; pfam05223" /db_xref="CDD:428377" misc_feature complement(470164..471666) /locus_tag="lmo0441" /note="Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis]; Region: FtsI; COG0768" /db_xref="CDD:440531" regulatory complement(472165..472170) /regulatory_class="ribosome_binding_site" regulatory 472317..472322 /regulatory_class="ribosome_binding_site" gene 472330..472644 /locus_tag="lmo0442" /db_xref="GeneID:985171" CDS 472330..472644 /locus_tag="lmo0442" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0442" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463971.1" /db_xref="GeneID:985171" /translation="MEEMEQPEKKVIIRGKGIHNKWKWSTIIVSILSVIIISVLSYQL YSVSQNIPENNTNGTMQGPGGGEMPSGTPPSGEPGQAPNSSDDSSDSGTSDSTTSSDG TL" regulatory 472767..472772 /regulatory_class="ribosome_binding_site" gene 472781..473710 /locus_tag="lmo0443" /db_xref="GeneID:985172" CDS 472781..473710 /locus_tag="lmo0443" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LytR family transcriptional regulator" /protein_id="NP_463972.1" /db_xref="GeneID:985172" /translation="MARHAQKRKARKGRIFVTILVALLILVGVVAVIGYFQYQSSLKE AQNESKLKDYKFNGAKAVGDEINVLLIGSDSRGEDQGRSDSLMIAHYNTKTNTPKLVS IMRDTYVDIPGHGKNKINAAYSYGGPELVRQTIKENFGVDVQYYVVANFEGFPKIVDT LAPEGIKINAEKDMSKNIDANIKKGEQVMDGKTLLQYARFRKDAEGDFGRIRRQQQVL EALKEQAIDVGDVGKIPDVIGKLQGYSSTNIPTGTLMSIGADFLLGKTETMEKFAIPV EGKWHNERIDGAGAVLRLDDMAANAKALQDFLK" misc_feature 472976..473707 /locus_tag="lmo0443" /note="Anionic cell wall polymer biosynthesis enzyme TagV/TagU, LytR-Cps2A-Psr (LCP) family (peptidoglycan teichoic acid transferase) [Cell wall/membrane/envelope biogenesis]; Region: Cps2a; COG1316" /db_xref="CDD:440927" regulatory 473718..473754 /regulatory_class="terminator" regulatory 473920..473925 /regulatory_class="ribosome_binding_site" gene 473936..476716 /locus_tag="lmo0444" /db_xref="GeneID:985173" CDS 473936..476716 /locus_tag="lmo0444" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463973.1" /db_xref="GeneID:985173" /translation="MNMVKNEWKKLFHNKVLLISFIAILFIPIMYASFFLKSVWDPYG KASHLPVAVVNLDETVEFQGQKMDVGNQLVAKLKKDDSLDWRFVSEKEAKQGMKDLKY YMIVTLPKDFSKNATTLLDENPKKMEIGYETNGSLNFIGEEVTKMAMEDLKAQVGTSV TKGYAETIFAQVGKLGNGIVQAADGAEQIADGGNKLSDGNKEITANLDKLANSMITFK DGANAFNVGLNQYASGVEKANNGAAQLDAGTKKLASNVGPLKNGIAALDTGANQLSSG VGQYTSGVNELNKGTSSALVGSSSLTKGLNDLNNQLPNLENGVGELQTGLEKLNTGSV KLKSGLETLDSNLSSPASKSQIAELQSGLNQFKTGITELNQQVNNTQLTTIVNKSKAI EPTINKIEEHLAALEALTSGNHSEQIIAKIEALETLVPEDKAKLINDIKPILDDLAQK QNEIIQMLHKDLEEMSQLLADVPDSIDEIEALQSGVSQLNNGFNGNPGIYSGTNALID SMVDIQKAVGSANDQNTLLGGATVLHNGIADATTGVKELNEKVPSLADGVNQLTGGSQ ALNNGLKKINDGTTELDNKSGELNSGATKLANGMNAFSGQLPALSNGINALNNGAIQL ADGTNELADKVPKLQNGAVALSNGAGEIQNGSAQLAAGSAQLGTGIDKLNTGATELST KLAAGSQQMSQINPTNKNFNMFASPDKVNHKNYSTVPNYGAALAPYVMSLALYVGALV FNFVFPIRKISMRGQTSTAWWASKASVGVFVAIVMALIQATVMLVLGLHIDSLIQFYA MAITTSLAYMFIIMFLAMTFDNPGRFVAMILLIVQLGGAGGTFPMPLTNGFFNAIHPF LPMTYSIYGFRQAITSGIGMNVYFQSLLVLVGIFAVFIGLLWLGMKQLQKKHLEGVSQ LDNNQELQAVED" misc_feature 473951..474442 /locus_tag="lmo0444" /note="YhgE/Pip N-terminal domain; Region: pip_yhgE_Nterm; TIGR03061" /db_xref="CDD:274413" misc_feature <474830..>475987 /locus_tag="lmo0444" /note="helix-rich Mycoplasma protein; Region: Mplasa_alph_rch; TIGR04523" /db_xref="CDD:275316" misc_feature 476039..476653 /locus_tag="lmo0444" /note="YhgE/Pip C-terminal domain; Region: pip_yhgE_Cterm; TIGR03062" /db_xref="CDD:274414" regulatory 476723..476764 /regulatory_class="terminator" regulatory 476947..476952 /regulatory_class="ribosome_binding_site" gene 476960..478447 /locus_tag="lmo0445" /db_xref="GeneID:985175" CDS 476960..478447 /locus_tag="lmo0445" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcripitonal regulator" /protein_id="NP_463974.1" /db_xref="GeneID:985175" /translation="MKKDVYLAGDQSITVSMMLLRMIAEESRWYTVNELSERLDMNQR TMQRYIADLLEKIEDYNDPNIQLYTAKNKGVFLEITLGADVLNFELYLLEENVTIILM KAIFFEEFTSVKKFAMDYFLSETTIRRSLKYFQELLEPYGIKLKRETYEVVGPEEQVR MFFYSYFWRLYQGAIWPFDIVNHKMVEEATMKVTSSLRQNLTYVQQYQIEYVIAINII RIRKRHLVELKPNWKNYLDLNNDFKSLTKIKAVFESLNIQKESEIYFFYLLMETRPKL YENKEVARRALEPHKKNNSDVYAATEVFIRVFSEEMAPIPQKKYDLFFNSSFSAHLFC TLFKYFSADINGYEYIRKFKEYYPKLHQKMDELLDILYEETGNELFLEKDFLLTRYGL LFSSIKRLTYFEEEIQIVLDTDLPKFAELNLRHQIFDSLKYRYKVHFLNKNSAPQADV ILTTVATPMMVERYNREKVLHIGAEPSARDFYNIVNIVVEAISTK" misc_feature 477014..>478096 /locus_tag="lmo0445" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" misc_feature 477200..477460 /locus_tag="lmo0445" /note="Mga helix-turn-helix domain; Region: Mga; pfam05043" /db_xref="CDD:428276" regulatory 478459..478487 /regulatory_class="terminator" regulatory 478706..478711 /regulatory_class="ribosome_binding_site" gene 478721..479710 /locus_tag="lmo0446" /db_xref="GeneID:985176" CDS 478721..479710 /locus_tag="lmo0446" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="penicillin acylase" /protein_id="NP_463975.1" /db_xref="GeneID:985176" /translation="MCTSFVLETLDGKHLLSRTMDFAFILEANPTISPRNYGWKSSTD GANYINRYAFVGAGRELDKYIFADGLNEEGLSCASLYLPGEAVYAPAPVEGKINLAPQ EFLLWLLGTCATIKDVEAKLSVINLVDQPVPLLGITTPLHWIFTDKSGRCVVIEPTET SLRIKENPVGVMTNTPRIEWHIENLRNYTGLQATQLAPVKFGEYMAKPFSQGTGTSKL PGGYTPPERFVRAAYLKENIIKAKNEEEAITNVWYVLNSVRIPNGAVIKESGDPDFTQ YVASMCSESKTYYFTSYENNQINSVTLSKEVIENMKEPTTYQVDKVQNVNKLV" misc_feature 478724..479629 /locus_tag="lmo0446" /note="Penicillin V acylase (PVA), also known as conjugated bile salt acid hydrolase (CBAH), catalyzes the hydrolysis of penicillin V to yield 6-amino penicillanic acid (6-APA), an important key intermediate of semisynthetic penicillins. PVA has an N-terminal...; Region: Ntn_PVA; cd00542" /db_xref="CDD:238303" misc_feature order(478724..478726,478772..478774,478778..478780, 478796..478798,478901..478903,478919..478921, 479114..479116,479126..479128,479141..479143) /locus_tag="lmo0446" /note="active site" /db_xref="CDD:238303" regulatory 479752..479757 /regulatory_class="ribosome_binding_site" gene 479765..481153 /locus_tag="lmo0447" /db_xref="GeneID:986724" CDS 479765..481153 /locus_tag="lmo0447" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glutamate decarboxylase" /protein_id="NP_463976.1" /db_xref="GeneID:986724" /translation="MFKTNVEQNNVPVFGSFESGQDLPEKRMNKESVDPRIAYQLVKD QLIDEGSARQNLATFCQTYMEPEAEQIMAETMEKNAIDKSEYPQTAKLESSCVNMLAD LWNVDESEHYMGTSTVGSSEACMLGGMAMKFRWRSAALKNGLDIHAKKPSLVISSGYQ VCWEKFCVYWDIELREVPMSEEHLSINTDIIMDYVDEYTIGIVGILGITYTGKFDDIM TLNDLVEDYNNTHDNEVVIHVDGASGAMFTPFVEPGLEWDFRLPNVVSINTSGHKYGL VYPGVGWILWRDKEYLPEELVFDVSYLGGHMPTMAINFSRSASQIIGQYYNFLRFGYE GYRQIHMRTRDGALQLSQAVAETGLFEIYNDGANLPIVCYKLKDDANVAWTLYDLADR LQMKGWQVPAYPLPKEMGNTIIQRYVCRGDLGQNMVTAFKNDLSESIEELNNAHILYH DVNTSKTHGFTH" misc_feature 479798..481093 /locus_tag="lmo0447" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl18945" /db_xref="CDD:450240" misc_feature order(480122..480127,480134..480136,480377..480379, 480482..480484,480491..480493,480572..480574, 480581..480583) /locus_tag="lmo0447" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99743" misc_feature 480581..480583 /locus_tag="lmo0447" /note="catalytic residue [active]" /db_xref="CDD:99743" regulatory 481235..481240 /regulatory_class="ribosome_binding_site" gene 481250..482701 /locus_tag="lmo0448" /db_xref="GeneID:985174" CDS 481250..482701 /locus_tag="lmo0448" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid antiporter" /protein_id="NP_463977.1" /db_xref="GeneID:985174" /translation="MKQQTSAKTLSLFGFFAITASLFITVYEYPTFATSGFSLVFFLL LCGFLWFLPVSLCSAELATVDGYQEGGIFGWVSKTLGEKYGFAAIFFQWFQITVGFVT MIYFIIGALSYVISFPALDSNPIYKFIAVLIIFWGLTLLQLKGTKVTAIFAKLGFVLG ITIPVLALFFLTIFHLKSGHHAAISITASSFIPKWTNMSSLVIFMLAYMGVEASAPHI NEMKNPKRDYPLAMILLIFVGITLNTIGGLSVASVVPSHDLSLSSGVVQTFKALILQN GNSMEWIVKLIASMIAFGVMAQVSSWIVGPTKGMQTVADKGIIPSVFRKTNKHNVPVP LIMVQGVIVSIWAAVLTFGGGGNNVSFLTAISLTVVIYLIGYVLFFLAYFVLVLKKKN LERTYQIPGGKIVKLIVAGVGLLMSVAAIVSAFFPPTSLSKSSDMSYEIILAASFIVT ILIPFFIYGIHLKKKNKVTKEKTIQEKVALSMK" misc_feature 481268..482632 /locus_tag="lmo0448" /note="glutamate:gamma-aminobutyrate antiporter; Region: 2A0307_GadC; TIGR00910" /db_xref="CDD:129988" gene 482713..482868 /locus_tag="lmo0448a" /db_xref="GeneID:16695811" CDS 482713..482868 /locus_tag="lmo0448a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475628.1" /db_xref="GeneID:16695811" /translation="MKKTIRWRNSYQPEPYFTTTKLWILLHIISLELEDDMQEIEPEK NYREKQI" regulatory 483150..483155 /regulatory_class="ribosome_binding_site" gene 483166..483891 /locus_tag="lmo0449" /db_xref="GeneID:985180" CDS 483166..483891 /locus_tag="lmo0449" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0449" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463978.1" /db_xref="GeneID:985180" /translation="MKDKTKKRKWNWAQILAIFVLVTLVVSMVYATVNLITAPSGNVP EGQQTKGDYSLMLMQCVLGVVVLFLPSIISKKMKFVIPNAMYIVFIVFLYCAIYLGEV RSFYYLIPNWDTILHTFSGAMLGGLGFSIVSLLNNDERITLSMSPVFVALFACSFAVF LGVFWEFYEFAADSFGMNMQKTMLEDGTMLQGHAAVADTMGDLFVDFLGAFVISIIGY FSIRKNKKWMKNFEFKKVDEEVK" regulatory complement(483886..483928) /regulatory_class="terminator" regulatory 483897..483939 /regulatory_class="terminator" gene complement(483934..484599) /locus_tag="lmo0450" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985181" CDS complement(483934..484599) /locus_tag="lmo0450" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463979.1" /db_xref="GeneID:985181" /translation="MARTRQISESIGLGLLLALAGGFMDAYSYIERGQVFANAQTGNI LLFGINISEGNWAIAIQYFWPVVSFTVGIALSEVIHRRDIRRLHWRQLSVLIEAVILI GVAFIPLDHNLIANSLISFVCGIQVESFRKMHGRGVATTMCIGNLRSATQNLCDYFEY KEKQYLHNSFLYFSVILSFIIGAVVGNFFIQLFAQYAILVCAFLQLIAFMMMFIDRES KII" misc_feature complement(483967..484533) /locus_tag="lmo0450" /note="Protein of unknown function (DUF1275); Region: DUF1275; pfam06912" /db_xref="CDD:462038" regulatory complement(484607..484612) /regulatory_class="ribosome_binding_site" gene complement(484620..485375) /locus_tag="lmo0451" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985185" CDS complement(484620..485375) /locus_tag="lmo0451" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0451" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463980.1" /db_xref="GeneID:985185" /translation="MTTIFPKEQNVTPLFEQILANPTACRRFKDVFLDNLESYQETRG FEKDDTLFAKIILSAYRQSDVSALLLGVCGRTLFELLRQAFLIPKKLTVDNPFFLTDK EGNFIAKKDDISNREQEKFQEIYQSDLHHSETTIFLVDDDDIVHSYEPDFSISTKRIN KKRGILVLYSLPDTLKSGMTESEVYAFIWKTFLHIQEIIPSSRIFYGQETSENADELG VFLPIHHFEKKMLQNIEQVNELVDALREQMVNK" misc_feature complement(484656..485369) /locus_tag="lmo0451" /note="Domain of unknown function (DUF4866); Region: DUF4866; pfam16160" /db_xref="CDD:465037" regulatory complement(485383..485388) /regulatory_class="ribosome_binding_site" gene complement(485493..487652) /locus_tag="lmo0452" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985178" CDS complement(485493..487652) /locus_tag="lmo0452" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463981.1" /db_xref="GeneID:985178" /translation="MKRYLTLVMLFILSVLLISEWIYPFAELTELSTATWIILFITLS LGSFFLRLKYYWTIPLHVVMIIIVSGIYYAKGGILAGNWLGSFFQITFNGFRDMVQFR SSDISMDFILIVFLIALWLLSYITTYSILRKQRIMSVLVLTVAYLAVINTFTDYNSNW AIVRTVLEGFLLLHLALASRIATPNRISADSLKRNGLFYHGFVILLLAVFVFSSLMLP KKAPIFPDPIPTIKNALGINTTRTVGYSEDDTTLGGALKKDNATVFTAQAEKGHYWRV ESKTVYTGTGWANANSGDVISFSSGDNFPIQLTEQTTGATNTAEISFASSSDYMPYPY GTQAVNGAVDSFSANLTIERVGPVDTIKNYTVQLKTPVYNIEKMQNADFSTLSNAFVS QYTQTPKDLPDRVTKLANKVTKDADSIYDKTKAIESYLSTSGTFTYSTDDAKETPMGA DYVDQFLFETQIGYCDNFSTSMVVMLRSLGIPARWAKGYTPGEGEKKENDAKTTYTIT NNNAHSWPEVFFPGTGWVPFEPTATFSNPENFQEPTTETANKPETPNDSTSTPETPNT PDKTPEQDNGSSSTGETPKKEEPKTETATSNVEIPSWVWWIPAGLVVALLALAIVFRR RIRGYLLLRSLRNSPEFGKTYHRLMKLLASYGYVRESSETLRHFSARVDADLTTSEFS RLTKMYETQLYSKNLTEKVIAAKETQLVQQIIARLTK" misc_feature complement(486552..487547) /locus_tag="lmo0452" /note="TgpA N-terminal domain; Region: TgpA_N; pfam11992" /db_xref="CDD:463423" misc_feature complement(486060..>486449) /locus_tag="lmo0452" /note="Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]; Region: YebA; COG1305" /db_xref="CDD:440916" misc_feature complement(<485766..>486104) /locus_tag="lmo0452" /note="envelope glycoprotein I; Provisional; Region: PHA03291" /db_xref="CDD:223033" misc_feature complement(<485571..485720) /locus_tag="lmo0452" /note="Domain of unknown function (DUF4129); Region: DUF4129; pfam13559" /db_xref="CDD:433308" gene complement(487649..488797) /locus_tag="lmo0453" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985179" CDS complement(487649..488797) /locus_tag="lmo0453" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463982.1" /db_xref="GeneID:985179" /translation="MLKKRLLLASRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFI LLLLFLSSIYPLKAWKVNRSFVKNTYHDGDLIDMQVSFTRKSRYPVGYLLFQQKIPAT FGKVRARQQVVYPLFKKQFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSE KSLTIYPTYFPNVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKS SAKSDQLMTREFENSATSRLSVIFYGASHPNFELSLRAAYSFIRKISEENGEIRVTLL GDQTSKFAPAKGTSRLQDISTAFAEIAPVDSLTLQESLDSNLHSGEKILLFTPCMDTM LMQKVTRLTDNKQLQIITFQSEHSKAMDAPAIFLEQASLLSRWERETK" misc_feature complement(487802..488416) /locus_tag="lmo0453" /note="Uncharacterized conserved protein, DUF58 family, contains vWF domain [Function unknown]; Region: YeaD2; COG1721" /db_xref="CDD:441327" regulatory complement(487663..487668) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0453" gene complement(488802..489749) /locus_tag="lmo0454" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985184" CDS complement(488802..489749) /locus_tag="lmo0454" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463983.1" /db_xref="GeneID:985184" /translation="MSIEPSIKINEIINEVEKVIVGKRHVVKLSLTALLAGGHVLLED VPGVGKTMMVRTLSKTIGVSFKRIQFTPDLLPADVTGVSIFNPETRDFEFRPGPVMGN IVLADEINRTAPRTQAALLEGMAENSVTVDGITRKLANPFFVMATQNPIEYEGTYALP EAQLDRFLLKINIGYPTVEEEMQLLTLKQYQDPLDQTKQVVTLSELLDLKNKAKQVFI DDVLKNYIIRLVDATRKHPSVALGISPRGSLAFMQAAQAFALIEGRDYVIPDDIQYLA PYIFTHRLILKSEAYYNEETAESIIASILKNTSVPVEKR" misc_feature complement(488880..489722) /locus_tag="lmo0454" /note="MoxR-like ATPase [General function prediction only]; Region: MoxR; COG0714" /db_xref="CDD:440478" regulatory complement(488805..488810) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0454" regulatory complement(489756..489761) /regulatory_class="ribosome_binding_site" regulatory 489890..489895 /regulatory_class="ribosome_binding_site" gene 489905..491500 /locus_tag="lmo0455" /db_xref="GeneID:985188" CDS 489905..491500 /locus_tag="lmo0455" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463984.1" /db_xref="GeneID:985188" /translation="MSVKLADLMKLPSLKEAKVVSGKSGLSKLVSSISVLEYTEVALL EDDLFDNDEFYGSEIVVSAFVNIRDDVEAQCRTIERLHKVGEVALILYYVGIFVPKMD QKLIDFANELDFTIIVMPENEMSLRYSEVIYEVVEAIVKQEMTDTNFVTESLEQISSV RPPQRNIDTTLKILSDRTHSSLVLTDNSFQVINSITWPRTRHWDFERVIETSKQIDEH ELVQLHLDERDFYTARKPIFQDGMQAMHLFMMKEKGALTADVVMQITEVVQVFMNLWG RNYVEISTAELMKAILNDESVKMRRLGKILNVDVSSIKWMWLVKTEEIRNNEQVLAEL KSFVASHFQVSLIDLFEDNIVVLLDNSVGQRDRTHTANEFAMMMKEHGIDLKITVCQG MEQTSDVQSAYSLVNEYKNAANAIYANKSIYSLQEIDFAAKCVEIVDRGELAIAEQMR PLKSLEDNDELIETLSVFLLEGESNYNQAAELLFLHKNTIKYRIQRINELLQYPATKI PESYNLYLAVAIRRLLGGNNNNK" misc_feature 489923..490321 /locus_tag="lmo0455" /note="Purine catabolism regulatory protein-like family; Region: PucR; pfam07905" /db_xref="CDD:462312" misc_feature 490757..491476 /locus_tag="lmo0455" /note="Sugar diacid utilization regulator CdaR [Transcription, Signal transduction mechanisms]; Region: CdaR; COG3835" /db_xref="CDD:443046" regulatory 491504..491552 /regulatory_class="terminator" regulatory 491619..491624 /regulatory_class="ribosome_binding_site" gene 491634..492917 /locus_tag="lmo0456" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985191" CDS 491634..492917 /locus_tag="lmo0456" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="permease" /protein_id="NP_463985.1" /db_xref="GeneID:985191" /translation="MTEKKTVEQAQSWQSLAFVWTGAMICVPSLLVGGTLISGMPLWE AILIALLGYGVIVVFMIYQGMQSSDLGIPAVSVASQVFGEQGSKKIISILLAIACLGW FGIQANVCGAAFSQFLGIYGINLPVPVSSLIWGVIMLLSAIYGIRILSILNYIAVPIL LFVCIYGLVVSLNNGGLAVVENYKPAGSMSFMTGLAITIGSFALGAVIAGDYSQYTKS RKDVVKAAIVGILPSGVLMIAVGAILALTAGTADISVVFTNLGLPVLGIIGLILAAWT TNAVNAFSGGIAIINVFNISEKYHKVAVAIAGGLGTVLAVIGILNHFVPIMSVLSAMV PPVAGVMIASYWIVQKGDKSKWAPVPGVNWLGVTSWLVGAVIAGIPVILTFFPALPQL PNQPLIGIILSLAVYLVGAKVLSGKTNNVENLEGK" misc_feature 491655..492878 /locus_tag="lmo0456" /note="nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain; Region: SLC-NCS1sbd_CobB-like; cd11484" /db_xref="CDD:271377" misc_feature order(491697..491699,491706..491708,492450..492452, 492459..492464) /locus_tag="lmo0456" /note="Na binding site [ion binding]; other site" /db_xref="CDD:271377" misc_feature order(491709..491711,491937..491939,491949..491951, 492234..492239,492243..492245,492465..492467, 492477..492479) /locus_tag="lmo0456" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:271377" regulatory 492904..492909 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0456" gene 492918..494018 /locus_tag="lmo0457" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985189" CDS 492918..494018 /locus_tag="lmo0457" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463986.1" /db_xref="GeneID:985189" /translation="MRYLDEQAIENIAIGAAFLGTGGGGDPYIGKMMALTAIKKHGPI KLLSPEEIADDDYFIPAAMMGAPSVLIEKFPKGDEFVRVFEKLGRYVGKEVKGTFPME AGGVNSMIPIVVAAQLGLPMVDCDGMGRAFPELQMVTFHLDGISATPMAITDEKGNIG IMETIDNKWTERLARVTTVEMGASSLVSLYPCNGAQIKQSSIKNIVTLSEEIGKVIRE TSMDEAEKLQKLLDVTHGYHLFEGKITDVVRETRAGFNFGRVKIDGLNKDTNSEVIVH FQNENLVAEKNGEPIAITPDLICMVDLETLMPVTTEALKYGKRVRVMALPADDAWRTD KGIETVGPRYFGYDVDFEPLEELVKKEERRHV" misc_feature 492918..493988 /locus_tag="lmo0457" /note="Uncharacterized conserved protein, DUF917 family [Function unknown]; Region: COG3535" /db_xref="CDD:442756" regulatory 493996..494001 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0457" gene 494011..495561 /locus_tag="lmo0458" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985192" CDS 494011..495561 /locus_tag="lmo0458" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hydantoinase" /protein_id="NP_463987.1" /db_xref="GeneID:985192" /translation="MYKIGIDVGGTNTDAVILDENQQLIHSVKMPTSEDIETGITESL HRVLSETGIDRSKVTHAMLGTTQCTNAIVERKKLAKVGVLRLGYPATASVLPYTAWPE DMVGFLSGKYKLTGGGYEYDGQVLSEINEAEIRETLASWKGEVESVAVVGVFSSLKND QELAVQKIIEEELGADIPVSISSSVGSVGLIERENATILNAALFKVIAATSDGFEKAL EQEGIEHAEIYLCQNDGTLMSLNYARQFPILTIACGPTNSIRGASYLAGLKDAMVLDV GGTTSDIGVLTDGFPRESSLAVDVGGVRTNFRMPDIISIGLGGGSIVREKDGDITIGP DSVGYRISEEALVFGGKTMTTTDIAVRLGMAEIGNPELVAHIPTDFAEKAYKKIADMT EDAIDKMKTSSGSVSLVLVGGGSVIIPDEISGVAQIFRDKNGPVANAIGASISQISGQ YEQIYIYSQIEREEALQDAEQKAREQATLAGAVTDSIEVVEVEEIPLAYHPGNATRLR VKVVGNLV" misc_feature 494020..>495099 /locus_tag="lmo0458" /note="N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit [Amino acid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]; Region: HyuA; COG0145" /db_xref="CDD:439915" regulatory 495592..495644 /regulatory_class="terminator" regulatory 496368..496373 /regulatory_class="ribosome_binding_site" gene 496381..497919 /locus_tag="lmo0459" /db_xref="GeneID:985370" CDS 496381..497919 /locus_tag="lmo0459" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_463988.1" /db_xref="GeneID:985370" /translation="MREYLDSKSQKKVALLEKIFYAENHTSTQEELLNDLNITYPTLI STIKTINFDIERFGYKAFSIVHSAPNLSYTLKISDNCSIQLIINAYIRESPKFQILET LLLASFPNLQALAKKVHVSYSGIKKEIKELNEELRERNLSISTGNQVEITGDEFSLRI FYAFLFLVTYSGDRWPFSFVQYDEITDLLESCPKEIYRANSIDKGMMIHYYVAMHLLR DRMNCQIDTTRQFKVALYKACTEESKKSESAFIKKVAKQLPNRNYKEITYTTQIILST IVAFGSYSSIEKMPSFFYMDEQLEEMGFMKLVDFASERVNDNLSIPFSEKEMELLRYS FASINYRYFLLDNLINKFNNIVPGYTDLDRNIRKIHKVNHLEPLISQLVNLKEMRLLK PFEEKLASDYLIILDKRIDFSIHTLPIKVTILSTISNETAVFDFMRYFSSYYNLEIIN QVDPVVDLYISDFSVSPEVLTSLRINQPIVYVNTRWLESDYVKINDNLAKIARKKFIA NKKD" misc_feature 496426..>497361 /locus_tag="lmo0459" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" misc_feature 496615..496878 /locus_tag="lmo0459" /note="Mga helix-turn-helix domain; Region: Mga; pfam05043" /db_xref="CDD:428276" regulatory 497976..498010 /regulatory_class="terminator" regulatory 498158..498163 /regulatory_class="ribosome_binding_site" gene 498171..500240 /locus_tag="lmo0460" /db_xref="GeneID:985198" CDS 498171..500240 /locus_tag="lmo0460" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="membrane associated lipoprotein" /protein_id="NP_463989.1" /db_xref="GeneID:985198" /translation="MKKLSMRVILIVTIIFIACGSANVSIAQERDTTNILPEEELDSL YTSNLITEEVAQDKPAEVENLEEAPITEDLVQNPDVLEQPIADSDDSDLTVVNSGDFW TIYRNTVNGEYSLHMFGNVPSSKPTAWNSYLNRIKHIEIEEATLTGNFSSYFRNNVFT VLESVRIERSNLSRVTSFALAFYSSGIEKVIIRDNNYPTAPSLLTTEGMFKNCSNLME VDLSGLDTSAVTTMWDMFNSCRALEELDVSHFDTSSVTNMSYMFYDNRNLEVLDVSNL DTSSVTNMYAMFEDCTSLEELDVSHFDTSSVTDMYRVFNGCEKLKKLDVSNFDTSSAT AMVQMFRNCSALEKLDVSNFNTSLVTDMRAMFAGCTSLEALDVSNFDTSSVTNMAAMF SDNEKVEKLDLSTFDTSSVTNMGTMFKNCTALKSLYLDNFTHAASSTDMFTGTTSLSY LFVSHNVSNFNGLENTNWYDEKNWVQFETLSQLQTYHRKQSEPTGYRKGAFLSLTMDA MGGQFEDAEEQKVQNKFSGEYWEEVIPVKEGHYFDGWYLNQDCTNKFDFSLPADASIT IYAKWIENYTVIIPASISLNETSELKVEGINRGDKNLSVGLNRTATSISESNKLTLTN TADTTVQCLAPLSWDGSETNPEKAILTLTPGSEITEGDAVMNISIPENIQAGKYTGNL VFSIKYE" misc_feature 498795..498869 /locus_tag="lmo0460" /note="bacterial surface protein 26-residue repeat; Region: Liste_lipo_26; TIGR02167" /db_xref="CDD:274007" misc_feature 498816..498893 /locus_tag="lmo0460" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275381" misc_feature 498858..499232 /locus_tag="lmo0460" /note="Mycoplasma protein of unknown function, DUF285; Region: DUF285; pfam03382" /db_xref="CDD:427272" misc_feature 498894..498971 /locus_tag="lmo0460" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275381" misc_feature 498972..499049 /locus_tag="lmo0460" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275381" misc_feature 499050..499127 /locus_tag="lmo0460" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275381" misc_feature 499128..499205 /locus_tag="lmo0460" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275381" misc_feature 499170..499550 /locus_tag="lmo0460" /note="Mycoplasma protein of unknown function, DUF285; Region: DUF285; pfam03382" /db_xref="CDD:427272" misc_feature 499206..499283 /locus_tag="lmo0460" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275381" misc_feature 499362..499439 /locus_tag="lmo0460" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 499440..499511 /locus_tag="lmo0460" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature <499773..499880 /locus_tag="lmo0460" /note="Listeria-Bacteroides repeat domain (List_Bact_rpt); Region: Flg_new; pfam09479" /db_xref="CDD:462813" regulatory 500294..500299 /regulatory_class="ribosome_binding_site" gene 500306..500779 /locus_tag="lmo0461" /db_xref="GeneID:985193" CDS 500306..500779 /locus_tag="lmo0461" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0461" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463990.1" /db_xref="GeneID:985193" /translation="MKKKKVVVISLLLLLVSVIGISSYFLFKDKINLLDVDPSAVEWN GKKQKDTSGEENTIAIPGFEKVTLYANETKQAVNFHNPEINDCYFKISLIHPDGSVLW RSDLIEPGKGMYSIELEKTLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV" regulatory 500784..500789 /regulatory_class="ribosome_binding_site" gene 500799..501284 /locus_tag="lmo0462" /db_xref="GeneID:985196" CDS 500799..501284 /locus_tag="lmo0462" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0462" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463991.1" /db_xref="GeneID:985196" /translation="MNKLVLSTLSVAAMGMVIFSGGTAYAADKEGNTVVEYSVEGDYT LVVPEKVNLSNDNATEMSVKTINRNLEPGKEVEVTLSSGLSADGEIELERVGATSDVI TSSFKSNNSTVTMANPVIGSFSGYAIEETEVSKIQIGSPQGDKKAGAYQTTLTFTAAF K" regulatory 501296..501301 /regulatory_class="ribosome_binding_site" gene 501312..501617 /locus_tag="lmo0463" /db_xref="GeneID:985195" CDS 501312..501617 /locus_tag="lmo0463" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0463" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463992.1" /db_xref="GeneID:985195" /translation="MKRKLVLAMVLISFCGMFLLSPERVQASQTVVEVFISEDDLDVS EENIQEIPKKELAASSDKDNKQHMLPKAGDTVTNYTLLGLVLVLIWLIMQRKRKKKE" misc_feature 501516..501611 /locus_tag="lmo0463" /note="LPXTG-motif cell wall anchor domain; Region: LPXTG_anchor; TIGR01167" /db_xref="CDD:273478" regulatory 501679..501684 /regulatory_class="ribosome_binding_site" gene 501693..501959 /locus_tag="lmo0464" /db_xref="GeneID:985200" CDS 501693..501959 /locus_tag="lmo0464" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_463993.1" /db_xref="GeneID:985200" /translation="MARIEYGEEIQKSLLVLYSRGSTIDSICKEYGIPRYEFHKWMKL HDADKLETKEVKTLLQIRELKQQKNKLEEEILFLNEAINLLESP" misc_feature 501714..>501947 /locus_tag="lmo0464" /note="IS3 family transposase; Region: transpos_IS3; NF033516" /db_xref="CDD:468052" regulatory 502000..502035 /regulatory_class="terminator" gene 502198..502362 /locus_tag="lmo0464a" /db_xref="GeneID:16695812" CDS 502198..502362 /locus_tag="lmo0464a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475629.1" /db_xref="GeneID:16695812" /translation="MYVESKEELEKIIYQQLINNINVKPDPWKWEERNALIVEIEVKA VLEKYGSTPI" gene complement(502424..502660) /locus_tag="lmo0465" /db_xref="GeneID:985197" CDS complement(502424..502660) /locus_tag="lmo0465" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463994.1" /db_xref="GeneID:985197" /translation="MSLKKILESDESIEKKEQQIDSYYQSELITRVEACELLDVSTKS LDRYIKQNKLSFQLNSLLIPHFCLIVLLMPLAIL" regulatory complement(502668..502673) /regulatory_class="ribosome_binding_site" regulatory 502885..502890 /regulatory_class="ribosome_binding_site" gene 502899..504629 /locus_tag="lmo0466" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985199" CDS 502899..504629 /locus_tag="lmo0466" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0466" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463995.1" /db_xref="GeneID:985199" /translation="MVKYTNPKIEKLGVNAVSNYIVESDYLSDFLAQQSTEPATDGTI RIYNGPGERKRDLIGIVPVQVKGTTTKNIIKYNRHEIDIVDLTYYYKVGGVVYFVVYV TNKVPKIYYRDLLRIDIKEILKKNEKLRGKKEKGTITIDFREVPVNVEDFRTVLLNFH KDQDYQTKDYVELGSINEISRDLTFTIIAPNSNIVEALKYVSPVLYKNEGDLKIPVRR FKIGELSVFTKSEFSIGIKGANSYIATVMEGEEETEIQIGSLQQLIVKFKEGRFKVDF EAKGKIQETIELLEILLGIVTGVNLYIDNKPVTEFFIEEVNEDFISRVNHALESFKKT QEALNHCKVPSNFHYEELTENDIDVINSIMELYQTSIDNTWGKFEFNNRLVYLLKHKG TIYNLLDSNVALEINFWSKREDGIQYTTTPLILIDDFSKMNDTEICNIKGPIEKLIPI HEKACSDINLICVRLIDAYDQTNNNQFLLVAFELLELIIPFTTNNEIHLIYLNKYQIK KRWDNLVMEDINHLVSIQKEFEEDKRIHLATLILLSAKNDAAQLLSELKNNEGFSLED MPILNLLEKN" misc_feature 502926..503375 /locus_tag="lmo0466" /note="Domain of unknown function (DUF4365); Region: DUF4365; pfam14280" /db_xref="CDD:433834" gene 504674..504997 /locus_tag="lmo0467" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985201" CDS 504674..504997 /locus_tag="lmo0467" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0467" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463996.1" /db_xref="GeneID:985201" /translation="MYQKASEKMKETMKANIALVESIRISSISNKKLQSDNKSGHTVV TFKDNKWVARICVSGVEHQLGSFVTKEEAIDARIEGEKYFQPLINKYNNRLDVFYSER RPFWT" regulatory 504957..504962 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0467" gene 504972..505277 /locus_tag="lmo0468" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984468" CDS 504972..505277 /locus_tag="lmo0468" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0468" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463997.1" /db_xref="GeneID:984468" /translation="MNVDPFGRKVELMIIGNGLDVKANLASTFVDYYKHRCKLMRLEY NEDDFYRLKSKNYFPMKVKMQQFPSIRRCNIEILSIDAETAINENITFWDLVLFFCL" regulatory 505341..505346 /regulatory_class="ribosome_binding_site" gene 505351..506223 /locus_tag="lmo0469" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985204" CDS 505351..506223 /locus_tag="lmo0469" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0469" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463998.1" /db_xref="GeneID:985204" /translation="MSDPINIILNNCGFGENLEDEQENDLYNLMEERLEEKDKYVLSV AFIHKLNSYSNCSLEEFLMLELNKYEKYFSDYIKTEVTNKYEEYHKTRNNILTKLSGG LGATHSISVMNFNFTPNQFSDSVKLNEKIGLAHVNVHGSYLANSIFGIDTKSLEDIDT IGSGYRFTKTYRKLTLKTKRSTEILYHDITDIIFYGHSLGQADYAYFQSIFDYLDIYN NTIVLTFYYSDYKENVREEQTIAVRNLIEEYGKTFDNKHKGKNLLHKLLLEERISVTD LEIYEEDYSSKDMK" regulatory 506360..506365 /regulatory_class="ribosome_binding_site" gene 506368..506997 /locus_tag="lmo0470" /db_xref="GeneID:985233" CDS 506368..506997 /locus_tag="lmo0470" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_463999.1" /db_xref="GeneID:985233" /translation="MIDLEKLWIQYDRIIKENGAIILTAQTPFDKVLGASNIDNLRYE WIWEKTAATGHLNAKKMPLKAHENILVFYKKLPIYNPQKTVGHTAVHSYTKKQTDGSN YGRTKAGITGGGSTERYPRSVLTFKSDKQKSSLHPTQKPVALFEYLIKTYTNEGGLVL YNCMGSGTTAIACLNTNRKYIGFETDVGHYESSLSRIANHCCMLKEVQI" misc_feature <506377..506967 /locus_tag="lmo0470" /note="DNA modification methylase [Replication, recombination and repair]; Region: YhdJ; COG0863" /db_xref="CDD:440623" gene 507206..507394 /locus_tag="lmos18" /db_xref="GeneID:18245186" misc_RNA 507206..507394 /locus_tag="lmos18" /product="rli28" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245186" gene 507450..507643 /locus_tag="lmos19" /db_xref="GeneID:18245116" misc_RNA 507450..507643 /locus_tag="lmos19" /product="rli29" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245116" regulatory 507711..507716 /regulatory_class="ribosome_binding_site" gene 507723..508733 /locus_tag="lmo0471" /db_xref="GeneID:985203" CDS 507723..508733 /locus_tag="lmo0471" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0471" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464000.1" /db_xref="GeneID:985203" /translation="MKRKFSEEFELQGTQKDFQFVDIKLWTDQALFIDPSLIANAQHK ENQNGSIETNYATRAHNSLQSFFSTFFEMFKDISPSKLIKKKDQGRKGINRDEMILNL LQYSTENNALHLGYTADESKGTGCSPKMIYDFFSNMKFKHPSMFDFVNEPFHATGFIN EIGKDRSTDLTVSIILDVLCDFTLSICTQYSIPTKEFENYRHYWDPNEKMWKTRNYDL PTNNNGEPIVLVPKSFVTNKFQYDAEYVLKNYILEEKLDELRAQYPSKRLIKSDALKK LRLEHPDAFNKDLVLEYFVEKPGSYKNFMQRVNNGILGTHRGLLTDDEIEKATSETQE GD" gene 509400..510287 /locus_tag="lmo0472" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985207" CDS 509400..510287 /locus_tag="lmo0472" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0472" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464001.1" /db_xref="GeneID:985207" /translation="MIYLAILGKIYNEKSYFKTDVLRIMSQEIFKYEIKFDAYLRECA KSTDYQRIAEENLSKLVQEDNNQNVLANVLSFNYTHIPSKVTSEEGDEISIKVKDNVH GKLGNEIIFGIDHGTIDNDTPLYNFTKTYRKLYENKDSEESVLSIDIKVIKIYGHSLS NADYAYFQSIFDFLNIYENPINIIVYYTKYKENEAEIRQELSNAVQKLISRYGQSMDN KEKGKNLLHKLLLENRLTIKKINLKEASKRRRFAPAIDGTKYEARYATSLCSEIKKRS YPIAESHRTREYPRKIFGF" misc_feature <509481..509924 /locus_tag="lmo0472" /note="Bacteriophage abortive infection AbiH; Region: AbiH; pfam14253" /db_xref="CDD:433812" gene 510190..511212 /locus_tag="lmo0473" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986271" CDS 510190..511212 /locus_tag="lmo0473" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475630.1" /db_xref="GeneID:986271" /translation="MQQVYAVKSRSVHTQLLKAIEQENILEKYLAFEQSHGPFFNALA ELIQATGRAVQELLHHVTFNDKTGTYAVPKSAANSLLLMKKALDNARTENDKDLYPDD WEDYTVLAYTYVNNQGETVTMWLLEKDGKRVENKELQDFLEKHGQELPAISYIELSGE ELERRVNDSWKDGVNYLTGQKVSGFSGGVLRSSAYVASVKKTLDSAELIDIGLGLGTA AMRYTPLLAEQIEKLRLAKVGRWMSVDEFEKMLETGKVQMSRNGNRTYVAYPADKDAF PSAADDALYAEFKVNEKTIYPAGKEGWAQIPGPGSLIDRFNQKKGLPGITEMPDALDI NNLGGK" misc_feature <510190..510399 /locus_tag="lmo0473" /note="LXG domain of WXG superfamily; Region: LXG; pfam04740" /db_xref="CDD:428100" regulatory 511200..511205 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0473" gene 511215..511562 /locus_tag="lmo0474" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985208" CDS 511215..511562 /locus_tag="lmo0474" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0474" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464002.1" /db_xref="GeneID:985208" /translation="MQNDMYNNIRLSVIQLIDSKKENLKENNIKLTIIKNEKDGYVVE LDNDKCMAEIVVEEPTYTPYRYISFEVVSLMDGKVKIIYSWYDDETSQWSDIEKELNK GIQFLNNFKTMEQ" regulatory 511951..511956 /regulatory_class="ribosome_binding_site" gene 511966..512208 /locus_tag="lmo0475" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985206" CDS 511966..512208 /locus_tag="lmo0475" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0475" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464003.1" /db_xref="GeneID:985206" /translation="MKRIILTSTLIVWTIVCIYMSISMVSNNTGIAFPIWLHIILLIC FLATSIVNVKKKEYLWSTMLFEGELVVLLSLIIVLV" regulatory 512278..512312 /regulatory_class="terminator" gene complement(512291..513268) /locus_tag="lmo0476" /db_xref="GeneID:985213" CDS complement(512291..513268) /locus_tag="lmo0476" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxetanocin A resistance protein OxrB" /protein_id="NP_464004.1" /db_xref="GeneID:985213" /translation="MKMTDPLYGTFEIEPVLAELIQSPLVSRLAHVHQGGSSYLVNPL WDLSRLDHSIGVMLFIRKFGGSLEEQIAGLLHDVSHTAFSHVVDYALDFEEEDYHEQI FEDFVKTSTIPAILEKYGYSFEGIFNDISKWKILEQEAPELCADRIDYTLQDLYRHGK ISLAEVKEFLQALVMVDGRLYLANIALAEWFVAQYYSEVIDYFYDPLNVYSYEILAEA MRIAFQQETITTADLRLTDAELLAKLNANSDAREKIQLLASPHLEENEVDFTYHHKKK MRLINPSVLVDGRLIPADELSEKVREMNDWASERSKHGIYIKATKKSKQ" misc_feature complement(512321..513256) /locus_tag="lmo0476" /note="HD superfamily phosphohydrolase [General function prediction only]; Region: YdhJ; COG1078" /db_xref="CDD:440696" regulatory complement(513277..513282) /regulatory_class="ribosome_binding_site" gene 513584..513807 /locus_tag="lmos20" /db_xref="GeneID:18245187" misc_RNA 513584..513807 /locus_tag="lmos20" /product="rliA" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245187" regulatory 513989..513994 /regulatory_class="ribosome_binding_site" gene 514004..514381 /locus_tag="lmo0477" /db_xref="GeneID:985893" CDS 514004..514381 /locus_tag="lmo0477" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="secreted protein" /protein_id="NP_464005.1" /db_xref="GeneID:985893" /translation="MKKYKKWWITIGIIFLLSVIGYVYWFAIPEHMANKAVGNYLAEQ KIKSSQIETRVIKKDWKMGGYLTTIIFKDDPNLKYEYSYDERIDLPYHVFVDAYKDGS GQTEGEMKHPPLEEQLEEMNKSK" misc_feature 514016..514246 /locus_tag="lmo0477" /note="Protein of unknown function (DUF3139); Region: DUF3139; pfam11337" /db_xref="CDD:431823" regulatory 514666..514671 /regulatory_class="ribosome_binding_site" gene 514681..515058 /locus_tag="lmo0478" /db_xref="GeneID:985211" CDS 514681..515058 /locus_tag="lmo0478" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="secreted protein" /protein_id="NP_464006.1" /db_xref="GeneID:985211" /translation="MKKYKKWWITIGIVLILCVIGYVYWFVIPKHTANKAVDNYLAEQ KIKSSQIETRVIKKDWKMGGYLTKIVFKDDSDLKYEYVYDERYEYPHHIYLIAFKDGS SQEDNQMKHPSLQEQLEEMNKSK" misc_feature 514693..514923 /locus_tag="lmo0478" /note="Protein of unknown function (DUF3139); Region: DUF3139; pfam11337" /db_xref="CDD:431823" regulatory 515376..515381 /regulatory_class="ribosome_binding_site" gene 515391..515750 /locus_tag="lmo0479" /db_xref="GeneID:985210" CDS 515391..515750 /locus_tag="lmo0479" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="secreted protein" /protein_id="NP_464007.1" /db_xref="GeneID:985210" /translation="MKKYKKWWITIGIVLILYVIGYVYWFAIPKHTANEAVDDYLAAQ KINSTQVKTRDIQKDWTRGGYYVTIVFKDDPNLVYEYNYNSKRNTPYHINLLVFKDGS SQEDDQVKHPPLQEQKD" misc_feature 515403..515633 /locus_tag="lmo0479" /note="Protein of unknown function (DUF3139); Region: DUF3139; pfam11337" /db_xref="CDD:431823" regulatory 515773..515807 /regulatory_class="terminator" regulatory 516061..516067 /regulatory_class="ribosome_binding_site" gene 516076..516636 /locus_tag="lmo0480" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985214" CDS 516076..516636 /locus_tag="lmo0480" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464008.1" /db_xref="GeneID:985214" /translation="MAESLITKKAIAGGLMELCQHKRFEKISIADITNICGLNRQTFY YHFTDKYDLLTWTYENDFFHCLADGITLGNWDKHVLKMLESIKENADFYKNTVSADAS ILSFCFSKLTNSLFMDLFEKIDTNATVNEADRVFYAEFFSYGCSGVLIKWITRGFKEA PETIANQLFRLAKDTEFLANSMYREN" misc_feature 516094..>516333 /locus_tag="lmo0480" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" misc_feature 516295..516597 /locus_tag="lmo0480" /note="Transcriptional regulator C-terminal region; Region: TetR_C_8; pfam14278" /db_xref="CDD:464123" regulatory 516732..516737 /regulatory_class="ribosome_binding_site" gene 516746..518446 /locus_tag="lmo0481" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985215" CDS 516746..518446 /locus_tag="lmo0481" /experiment="EXISTENCE:[PMID:19448609]" /note="in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464009.1" /db_xref="GeneID:985215" /translation="MKNKKRTLVALTGAAIGTGIAAKKISEQKAAEKERAVDEAIKAR YYGDKQVYFVGGGIASLAGAVYLIRDANFDGKNIHIIEGMHILGGSNDGAGSVEHGFV CRGGRMLNEETYENFWDLFSSIPSLDMPNFSVTEEILNFDHLHPTHAQARLVDKDRNI LDAHSMGFNNNDRMLMTKLLATPEEKLDNLTIRDWFDEHFFETNFWYMWQTTFAFQKW SSLFEFRRYMNRMMLEFSRIDTLEGVTRTPLNQYESLILPLKTFLDKHHVDFTINQTV EDIDFKDAPGITATALHLSDESTIELGPDDDVIMTNACMTDSATLGDMNTPAPKPEEK PISGELWYKVAQKKPNLGNPEPFFAHEEETNWQSFTVTCHGDKLLKRIERFTGNIPGS GALMTFKDSNWLMSTVVAAQPHFKAQDANTTIFWGYGLYPDRVGDFVKKPMKECTGEE ILYELMCHLNWQDDFEEIKADIINVIPCYMPYIDAQFEPRAMSDRPAVVPEGSTNFAM ISQFVEIPKDMVFTEEYSVRAARIAVYTLLDIDKKICPVTPHNRDPKVLAKATQTMFR " misc_feature 516887..518443 /locus_tag="lmo0481" /note="myosin-cross-reactive antigen; Provisional; Region: PRK13977" /db_xref="CDD:237575" regulatory 518584..518589 /regulatory_class="ribosome_binding_site" gene 518597..519700 /locus_tag="lmo0482" /db_xref="GeneID:986229" CDS 518597..519700 /locus_tag="lmo0482" /experiment="EXISTENCE:[PMID:19448609]" /note="23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance" /codon_start=1 /transl_table=11 /product="ribosomal RNA large subunit methyltransferase N" /protein_id="NP_464010.1" /db_xref="GeneID:986229" /translation="MEKSSIYGLTWTNLTEWLEAHGQKKFRATQVWDWLYRKRVKTFE EMSNVPKETIELLTANFVMNTLEEQVVQESTDGTTKYLFKLSDGNLIETVMMKQEYGL SVCVTTQVGCNIGCTFCASGLLKKSRDLTAGEIVEQIMNVQHYLDGRNLEERVSHVVV MGIGEPFDNYDNVMDFLRVINHDKGLAIGARHITVSTSGLAPRIIDFANEDFQVNLAI SLHAPNNELRTSIMRINKTYSIEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEAL ELAALLGEHRHLAYVNLIPYNPVDEHIDYERSTKEDVLAFYDTLKKNGINCVIRREHG TDIDAACGQLRSKQIKRVGVRERMKQKQAAAEE" misc_feature 518612..519640 /locus_tag="lmo0482" /note="Adenine C2-methylase RlmN of 23S rRNA A2503 and tRNA A37 [Translation, ribosomal structure and biogenesis]; Region: RlmN; COG0820" /db_xref="CDD:440582" regulatory 519709..519749 /regulatory_class="terminator" regulatory 519774..519779 /regulatory_class="ribosome_binding_site" gene 519789..520268 /locus_tag="lmo0483" /db_xref="GeneID:985216" CDS 519789..520268 /locus_tag="lmo0483" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0483" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464011.1" /db_xref="GeneID:985216" /translation="MEVEIVERNAFTAVGKKRTFSVENDAQKEKISQFWQEVNANGDA ERINELAEFATIDGILGVCQMNGDQMDYYIAIESELTPPADMEKLTIPASKWAIFKSV GPLPNAIQKVWEYIYGEWFQTCNYTHGNAPELEVYTEGDTTAVDYYSEVWIPVVEKD" misc_feature 519789..520256 /locus_tag="lmo0483" /note="Predicted transcriptional regulator YdeE, contains AraC-type DNA-binding domain [Transcription]; Region: YdeE; COG3708" /db_xref="CDD:442922" regulatory 520412..520417 /regulatory_class="ribosome_binding_site" gene 520426..520791 /locus_tag="lmo0484" /db_xref="GeneID:985220" CDS 520426..520791 /locus_tag="lmo0484" /EC_number="1.14.99.3" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0484; iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source" /codon_start=1 /transl_table=11 /product="heme-degrading monooxygenase IsdG" /protein_id="NP_464012.1" /db_xref="GeneID:985220" /translation="MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGF ELWHSKPEDKDYEEVVVTSKWESEEAQRNWVKSDSFKKAHGRTKDTREQREDRKGIVG NAIARFEVVHVQNPVIVEK" misc_feature 520426..520788 /locus_tag="lmo0484" /note="heme oxygenase IsdG; Region: PRK13316" /db_xref="CDD:183970" regulatory 520804..520840 /regulatory_class="terminator" regulatory 520947..520952 /regulatory_class="ribosome_binding_site" gene 520961..521536 /locus_tag="lmo0485" /db_xref="GeneID:985219" CDS 520961..521536 /locus_tag="lmo0485" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0485" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464013.1" /db_xref="GeneID:985219" /translation="MIEKTIMERRSIKKANDEPISRETVNTILEQAAYAPFHSKVEPW NVYVLHTLAEKERYIEKIIEFNEREQGVSFSEAEIADLKAGYAKKIITPPYLLIVTTN IIGHGKKDFESIGATSAFIQNIQLLGWEAGIGMIWRSNRFIFDAKFADDLGIPAEQKI VGTLHLTSLAEVPEAKPRRPLNEWVKNLADL" misc_feature 520970..521458 /locus_tag="lmo0485" /note="nitroreductase family protein; Region: Nitro_FMN_reductase; cl00514" /db_xref="CDD:444950" misc_feature order(520979..520981,520985..520987,521039..521041, 521045..521050,521054..521056,521063..521068, 521072..521074,521078..521080,521084..521086, 521090..521107,521306..521308,521312..521317, 521324..521329,521336..521341,521375..521380, 521414..521416) /locus_tag="lmo0485" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:380311" misc_feature order(520985..520987,520991..520993,520997..520999, 521075..521077,521375..521380) /locus_tag="lmo0485" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:380311" regulatory 521587..521592 /regulatory_class="ribosome_binding_site" gene 521601..521771 /gene="rpmF" /locus_tag="lmo0486" /db_xref="GeneID:985221" CDS 521601..521771 /gene="rpmF" /locus_tag="lmo0486" /experiment="EXISTENCE:[PMID:19448609]" /note="some L32 proteins have zinc finger motifs consisting of CXXC while others do not" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L32" /protein_id="NP_464014.1" /db_xref="GeneID:985221" /translation="MAVPARRTSKAKKNKRRTHKGLTTPGLSRDSETGEYRMSHRISP DGTYKGRTIIEK" misc_feature 521604..521768 /gene="rpmF" /locus_tag="lmo0486" /note="Ribosomal protein L32 [Translation, ribosomal structure and biogenesis]; Region: RpmF; COG0333" /db_xref="CDD:440102" regulatory 521779..521810 /regulatory_class="terminator" regulatory 521846..521851 /regulatory_class="ribosome_binding_site" gene 521863..522591 /locus_tag="lmo0487" /db_xref="GeneID:985223" CDS 521863..522591 /locus_tag="lmo0487" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0487" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464015.1" /db_xref="GeneID:985223" /translation="MTEEFVNKEDALKNYNVKEFRTPDGYTSDMILTTVKEVNGKPTL HILLIKRSSTNAEGRPNIEGGKWAVPGGFVDENESADQAAERELEEETSLTGIPLIPF GVFDKPGRDPRGWIISRAFYAIVPPEALEKRAAGDDAADIGLFSMTEALELPLAFDHL DMLKKAYSAITEEFLLTTAICDFLPETFSAELLYQTLDGCTKPGILPDEVEFMENIEY LPYLEKVGELYRFNADAEAGSIYF" misc_feature 521935..522360 /locus_tag="lmo0487" /note="bifunctional NMN adenylyltransferase/ADP-ribose pyrophosphatase and similar proteins; Region: NUDIX_NadM_like; cd18873" /db_xref="CDD:467585" regulatory 522599..522622 /regulatory_class="terminator" gene complement(522628..523521) /locus_tag="lmo0488" /db_xref="GeneID:985225" CDS complement(522628..523521) /locus_tag="lmo0488" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="NP_464016.1" /db_xref="GeneID:985225" /translation="MNLRQLYYFKKLAEKEHYTIAAAELSITQPSLSHSIAELERELG VYLFEKQGRNIRLTKYGRFYLTYVKKSLAELEKGEKLLHELTSPSHGNIDLGFIYTMG AHTVPELVQNFTKVESHKDITFSFFQGATKSIIPDLKNEKFDLAICSYVENEPDIEFL PLTKQELVVVVAENHPLAKYDSIDLQDTADYSYIFFSDTSGLRPLIDSLFAEINIQPK IGCYVEEDTAMVGLVSVDYGISIMPKISSLAHYNVKVLSINEPKHDRFIYLASLKNHY ISPASKAFKDFALRYGKKHFL" misc_feature complement(523336..523515) /locus_tag="lmo0488" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(522658..523248) /locus_tag="lmo0488" /note="The substrate binding domain of LysR-type transcriptional regulator GltC, which activates gltA expression of glutamate synthase operon, contains type 2 periplasmic binding fold; Region: PBP2_GltC_like; cd08434" /db_xref="CDD:176125" misc_feature complement(order(522817..522822,522826..522831, 522847..522864,523138..523158,523162..523164, 523180..523182,523189..523194,523198..523203)) /locus_tag="lmo0488" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176125" regulatory complement(523529..523534) /regulatory_class="ribosome_binding_site" regulatory 523704..523709 /regulatory_class="ribosome_binding_site" gene 523719..525713 /locus_tag="lmo0489" /db_xref="GeneID:984913" CDS 523719..525713 /locus_tag="lmo0489" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="NADH:flavin oxidoreductase" /protein_id="NP_464017.1" /db_xref="GeneID:984913" /translation="MTDYPSIFEPLTVKRMTIKNRVIMPPMGTNLAGLNGEFLEEHMN YYEQRAKGGTGLITIENACVDFPYGTNGTTQLRIDNDQYIPGFYKLTERLHKHGTCVS IQINHAGASAYPARLNGLQPVSASDIPSKKGGTVPRPLTVEEIYEIVNKYGDAARRAQ QAGFDAVEIHGGHSYLLCQFLSPLYNKRTDEFGGTPENRARIVKLILEKVRAEVGPFF PIVLRFSADEFTEGGNHLEDILELLDYCQEEADILNVSAAINDNLYLQIDQMNLEDGW RSYLAKAVKDKFNKPTITSGNIRSPKAAEKILSEGYADLLAMGRGLIAEPNWVNKVAT GQEDMLRKCISCNIGCADHRISKSKPIRCTVNPDIIHEDKYKETKVTRPTNVVVIGGG TAGLEAACTAAEVGCNTTLIEANEQTGGLARAIANLPDKSRIADFPNYLANRAEKLTN LKVITGTKADTALIDTFNPDVVVNATGSKPLLPPIKGLLDVIDKEGSKVHSIFGLISN IDDFTEFSNKKVAVIGGGAVGLDVVEYFSERGSDVTIVEMMPLLGKDLDMITRLSMMD IIEKNHVDVQTETALTEVAADHFKVKHDGVDAEIPFDYGFVCLGMRPERPLMEELAAY GKEKQIEIVNIGDSAATRKILEGVREGRNILTTLEKIGSL" misc_feature 523719..524819 /locus_tag="lmo0489" /note="2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family [Energy production and conversion]; Region: FadH; COG1902" /db_xref="CDD:441506" misc_feature 524868..525581 /locus_tag="lmo0489" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox_2; pfam07992" /db_xref="CDD:400379" regulatory 525798..525803 /regulatory_class="ribosome_binding_site" gene 525813..526688 /gene="aroE" /locus_tag="lmo0490" /db_xref="GeneID:985396" CDS 525813..526688 /gene="aroE" /locus_tag="lmo0490" /EC_number="1.1.1.25" /experiment="EXISTENCE:[PMID:19448609]" /note="AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate" /codon_start=1 /transl_table=11 /product="shikimate 5-dehydrogenase" /protein_id="NP_464018.1" /db_xref="GeneID:985396" /translation="MTNKITERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYV YLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN DDGVLTGHITDGTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIF NRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFE GETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIW THKEMPVDYIKEILF" misc_feature 525834..526685 /gene="aroE" /locus_tag="lmo0490" /note="shikimate dehydrogenase; Region: PRK12548" /db_xref="CDD:183585" regulatory 526741..526746 /regulatory_class="ribosome_binding_site" gene 526754..527512 /gene="aroD" /locus_tag="lmo0491" /db_xref="GeneID:985226" CDS 526754..527512 /gene="aroD" /locus_tag="lmo0491" /EC_number="4.2.1.10" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis" /codon_start=1 /transl_table=11 /product="3-dehydroquinate dehydratase" /protein_id="NP_464019.1" /db_xref="GeneID:985226" /translation="MNKVVVKNVTFGEGAPKICVPMVGKTVAALKEEAEMLQTIDLDV VEWRVDFFEDVKDLAKVEAALGEIRAILPETPILFTFRSAKEGGELAVSDEFYFELNE TLAGTGKIDLVDVELFNEEADVLRLIETAHKNNVKVVMSNHDFDKTPAKEEIVSRLTR MEALGADLPKIAVMPKSAGDVLTLLDATNTVFEKANQPIITMSMAGTGVISRLAGEVF GSAMTFGAAKKASAPGQIDVNELRHVLDLLHKQF" misc_feature 526754..527509 /gene="aroD" /locus_tag="lmo0491" /note="type I 3-dehydroquinate dehydratase; Region: aroD; PRK02412" /db_xref="CDD:235036" misc_feature order(526814..526816,526889..526891,526895..526897, 526997..526999,527180..527182,527261..527263, 527387..527389,527444..527449,527456..527458) /gene="aroD" /locus_tag="lmo0491" /note="active site" /db_xref="CDD:188633" misc_feature 527261..527263 /gene="aroD" /locus_tag="lmo0491" /note="catalytic residue [active]" /db_xref="CDD:188633" misc_feature order(527297..527299,527309..527311,527318..527320, 527390..527395,527405..527407,527471..527473, 527483..527485,527492..527494) /gene="aroD" /locus_tag="lmo0491" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:188633" regulatory complement(527516..527561) /regulatory_class="terminator" regulatory 527527..527572 /regulatory_class="terminator" gene complement(527580..528488) /locus_tag="lmo0492" /db_xref="GeneID:985232" CDS complement(527580..528488) /locus_tag="lmo0492" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="NP_464020.1" /db_xref="GeneID:985232" /translation="MKLSNLKYFVDVAMEGSFTRASEKLFISQPTLSRRIKEVETELG VELFIRNRHSLELSSAGQQFLIEVNDILNRVNKLSHMFDNQKTADEAGQLLKIGYLSN FNMNAMYELLESFKQSHPHVQFSLKPDTPMNLAEGLSNGQYDLVFNLSAYFQPNMSIE EVLFIKNHLQIAIPADHRFRKKKKVYFNDLKQEIVILLERKQSPIIVDYVVSQCTKHG FNLKANSYVKDLDEGLAMTSVGEGLAFLYSGMNDGTLEDKYNIKIMDIQEERNDQNIV AAINKQSENTLLQELFSFIKSSLLTK" misc_feature complement(<527919..528488) /locus_tag="lmo0492" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" misc_feature complement(527592..528206) /locus_tag="lmo0492" /note="LysR substrate binding domain; Region: LysR_substrate; pfam03466" /db_xref="CDD:460931" regulatory complement(528493..528498) /regulatory_class="ribosome_binding_site" gene complement(528563..530323) /locus_tag="lmo0493" /db_xref="GeneID:985231" CDS complement(528563..530323) /locus_tag="lmo0493" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acylase" /protein_id="NP_464021.1" /db_xref="GeneID:985231" /translation="MTAKITEKMLFSPSFEYVDNGIEHGVLSPFETKEIILEKGQQIA EGFKLLDCSIKMLKDVPVKMRDGITIYTDIYLPITEEKVPTLIAWSPYGKSAGTAPRY KNLFNMLGMGNAWNSGLTKFEAPDPAYWCAHGYAVCNPDMRGIAHSEGNTTMIGSQEA EDGYDLIEWLAKQSWSNGKTALTGTSYLAFSQWYIAAEQPPHLTCINPTEGLADGYRD LAFIGGIPDPNFIERLQINHVSAKNSQREDLTKEMEAYPLADSAIWKDKVADPSKITI PAFVIASYSNTLHTMGTFRSWRSLGSKEKWLRIHDRQEWPYYYDENNVEELRRFFDYY LLGKENNWTDTPTVRYALIDFQGGNQTDLPSEVFPPTNSENKRYYMNGLLRTLQETPT SDDFKVSYTTENLPGRASFQMTFDKETHFVGYPKAKLFMEVDGYDDLDVFVWLQKLDK FGNVLSEFVVPNHGAALQDFTQEGASALRYKGAWGRLRASMRQLDSQVSTDEIPAYSF DKVEKLSSGEIVELDIILSPIGLTYKAGETLRVVLSSKDELGSVMPGTPGCTPNNKGT HILHTSKEHPSYIQLPIINK" misc_feature complement(528572..530152) /locus_tag="lmo0493" /note="Predicted acyl esterase [General function prediction only]; Region: COG2936" /db_xref="CDD:442179" regulatory complement(530332..530337) /regulatory_class="ribosome_binding_site" regulatory 530500..530505 /regulatory_class="ribosome_binding_site" gene 530515..531108 /locus_tag="lmo0494" /db_xref="GeneID:985230" CDS 530515..531108 /locus_tag="lmo0494" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464022.1" /db_xref="GeneID:985230" /translation="MKKLLFLGDSVTDAGRDFENDRELGHGYVKMIAEQLEKEDVTVI NRGVSANRVADLHRRIEADAISFQPDVVTIMIGINDTWFSFSRWEDTSVTAFKEVYRV ILSRIKEETNAELVLMEPFVLPYPEDRKEWRGDLDPKIGAVRELAAEFGATLIPLDGL MNALAIKHGPTFLAEDGVHPTKAGHEAIASTWLEFTK" misc_feature 530515..531096 /locus_tag="lmo0494" /note="SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site...; Region: SGNH_hydrolase_like_2; cd01834" /db_xref="CDD:238872" misc_feature order(530542..530544,530662..530664,530749..530751, 531040..531042,531049..531051) /locus_tag="lmo0494" /note="active site" /db_xref="CDD:238872" misc_feature order(530542..530544,531040..531042,531049..531051) /locus_tag="lmo0494" /note="catalytic triad [active]" /db_xref="CDD:238872" misc_feature order(530542..530544,530662..530664,530749..530751) /locus_tag="lmo0494" /note="oxyanion hole [active]" /db_xref="CDD:238872" regulatory 531141..531177 /regulatory_class="terminator" regulatory 531281..531286 /regulatory_class="ribosome_binding_site" gene 531294..532253 /locus_tag="lmo0495" /db_xref="GeneID:985247" CDS 531294..532253 /locus_tag="lmo0495" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464023.1" /db_xref="GeneID:985247" /translation="MQKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFR IFTAAITVIIILFITKKLRLPTKQEFGLILLASIFNIVIHHFFLSNGLKLTTGTNAGL ILGSAPIVVAIFSVIFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIF IAMASQAFSFIIIKKLAGSMDTGLMTGYMLFLGSVMLFGLSRFMEPDGMSELVTVHSW KLWLLFVVSAVVATAFGNFVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKI PQLVGFGFIIIGVLLGSGALMDLIYERKKTKVRDPEKLLEKEV" misc_feature 531324..532166 /locus_tag="lmo0495" /note="Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]; Region: RhaT; COG0697" /db_xref="CDD:440461" regulatory 532316..532321 /regulatory_class="ribosome_binding_site" gene 532328..532552 /locus_tag="lmo0496" /db_xref="GeneID:984435" CDS 532328..532552 /locus_tag="lmo0496" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464024.1" /db_xref="GeneID:984435" /translation="MKLLLKNINELAAKQKSEGLTAFEKERQAALRQEYLKKIRGTVQ DNLHHVTIIDPLGDDVTPKKLKEIQAELRG" misc_feature 532328..532540 /locus_tag="lmo0496" /note="Uncharacterized conserved protein YnzC, UPF0291/DUF896 family [Function unknown]; Region: YnzC; COG4224" /db_xref="CDD:443368" regulatory complement(532556..532597) /regulatory_class="terminator" regulatory 532567..532608 /regulatory_class="terminator" gene complement(532603..534111) /locus_tag="lmo0497" /db_xref="GeneID:984596" CDS complement(532603..534111) /locus_tag="lmo0497" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar transferase" /protein_id="NP_464025.1" /db_xref="GeneID:984596" /translation="MIKISVIIPIYNAENYIEKAFSSLKNQTLAQNEFEILCIDDKST DNSLGKLKQLSKIHKNMRIINLHKNSGGPMIPRNKGIKEAKGKYIIFLDNDDYLGEEA LERLFIQAEKNQSEVIFGKYVGINGRGVPQSQFKKGNRNEADILADNLVYTLAPHKMF QTAFLKTKKIYFDPNILIGEDQYFVMKAYVNAKVITVLADYDYYYVVSRGDENLSIKE SKMDPREICKVVPAVVKEIEASPLHPTYKKTLIRAYIQRYFNDYITGNYNLDYKNMSE RQKTFVQVMKDTIVCHLDEKMKNELPTKTRFMIDIIAENNPEKLIDVRMQMENFSKNQ VVKVENGYIKGRFRKMRPQLAYDDVYDINHLNSSKVQLHSVTLQNNNYLLDISLEQSL LTRFQTALRLCLKERDGNLEIWISPLKMLSTERGIYAVDSTLFNHTCIWDLFIESEIN GFKNRKRVGKDRDFEEIVSSNNTPLLIQNNSYQIKAYFTTPFSNLSFQIISE" misc_feature complement(533461..534111) /locus_tag="lmo0497" /note="Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; Region: WcaA; COG0463" /db_xref="CDD:440231" misc_feature complement(532615..533007) /locus_tag="lmo0497" /note="TarS beta-glycosyltransferase C-terminal domain 1; Region: TarS_C1; pfam18674" /db_xref="CDD:408454" regulatory complement(534121..534126) /regulatory_class="ribosome_binding_site" regulatory 534294..534299 /regulatory_class="ribosome_binding_site" gene 534307..534756 /locus_tag="lmo0498" /db_xref="GeneID:985236" CDS 534307..534756 /locus_tag="lmo0498" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="5-phosphate isomerase" /protein_id="NP_464026.1" /db_xref="GeneID:985236" /translation="MEIAIAADHGGFQLKEKIRAHLIESGYTVKDFGCYSLESVDFPE YAAKVGHFVATENSLGVLCCGTGIGMSMAANKIKGVRAAVVSDAFSAMMTRRHNNSNV LCLGERVLGDSLALLLLDTWLVAEFEGGRHNTRLQKLAELEEREEDK" misc_feature 534307..534741 /locus_tag="lmo0498" /note="Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]; Region: RpiB; COG0698" /db_xref="CDD:440462" regulatory 534740..534745 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0498" gene 534753..535421 /locus_tag="lmo0499" /db_xref="GeneID:985241" CDS 534753..535421 /locus_tag="lmo0499" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ribulose-5-phosphate 3 epimerase" /protein_id="NP_464027.1" /db_xref="GeneID:985241" /translation="MKMIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENA AMGAYVLQDIKNNTKMLLDIHLATVNPDKFVDLYAAIKPAYMSFHLEASRDVNATINH IRELGIRPSIAISPDTEIEQIYPFLGKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQK ELESHTNKPLIEVDGNIFEETVRLLEPIGADVYVVGTAALFNEKAGSYTEKLAPLREI IQER" misc_feature 534759..535400 /locus_tag="lmo0499" /note="Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose...; Region: RPE; cd00429" /db_xref="CDD:238244" misc_feature order(534771..534773,534777..534779,534852..534854, 534951..534953,535170..535175,535179..535184, 535272..535274,535278..535280,535338..535343) /locus_tag="lmo0499" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238244" misc_feature order(534792..534794,534801..534803,534861..534863, 534867..534872,534876..534878,534882..534893, 534960..534962,534972..534974,535035..535037, 535041..535046,535098..535100,535107..535109, 535113..535115,535125..535127,535167..535169, 535194..535196,535200..535202,535212..535214) /locus_tag="lmo0499" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:238244" misc_feature order(534846..534848,534852..534854,534945..534947, 535272..535274) /locus_tag="lmo0499" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238244" regulatory 535416..535422 /regulatory_class="ribosome_binding_site" gene 535428..536078 /locus_tag="lmo0500" /db_xref="GeneID:985240" CDS 535428..536078 /locus_tag="lmo0500" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transaldolase" /protein_id="NP_464028.1" /db_xref="GeneID:985240" /translation="MHLDSANLDDVKKIQASSIFKGITTNPTILVKEKCNRQTAINRI LELTDKQVFVQTVGFTYEEILADARMLLTMFGKDKIAIKIPAHEAGTNVIDTLKKEDK TIQILGTAIYSADQAITAALAGADFVAPYVNRMSAANIDPFKEITQMRHFFDKKALKT QIMAASFKHSGQVMQAYESGADTVTIPYEIYSQMTNKVLAVEAIRVFNEDAVLYEK" misc_feature 535434..536060 /locus_tag="lmo0500" /note="Transaldolase/fructose-6-phosphate aldolase [Carbohydrate transport and metabolism]; Region: TalA; COG0176" /db_xref="CDD:439946" regulatory 536174..536179 /regulatory_class="ribosome_binding_site" gene 536187..538247 /locus_tag="lmo0501" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985244" CDS 536187..538247 /locus_tag="lmo0501" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional antiterminator BglG" /protein_id="NP_464029.1" /db_xref="GeneID:985244" /translation="MYLDNRSKTLFQEVIKNPNITNKQLEVKYKLSRYQISYSFQKVN EWLKWKNYPEVKRSKNGRFILEPELTALFSEKETRDPSVEYLPSENERANLILLMLLT SKEELSLAHFTTKIQVSKNTILRDLKVAQKLLPKETTVTYSRASGYQLAGSEWELRKV LTQVVSSVKEMFRGEHYFLSYSGIEKVQLMEIRRTLEEAEAMMQIKFTYEQIELLPYL LSVMFLRIRDRRLIDTAFHIDEKSLSDTREYHITDILLEKTGPVPEQERLFITLQLLT TNIFSGEILTEKLTEDLEKVVLTCLDLFEKKALVSLKNKHILIEKLLLHLKPAYYRIK YQMNLEDTLYEKFNQEFEALNFIVKEAFDPLAKFIGREIPAGEIFFISLFIGSDMIPQ NDIYHKQKRAIVLCPSGVTFSKIMENILVKLFPEIHFYPTISVREYAFFKAEVDIVFS SIPLKDGENVFVVQPFMNDIEKTQLRQHVLQNLFGMGNQLTSIDKIMEVVERNADIKD PNAIRDGIIDILSANIATDENKRVKKVYLHDLITEDNIMICEDVKNYQEAIRLASQPL LLQQAITANYVKTMIDNHKFHDPYIIIGEDIAIPHAMPNAGVNRLAMSLLVVKNGVYF SETEQVHFVIVIAPVDKEQHIEALYQIVHLAENHQILDDLLENVTKEKIMQTINQLVI REDE" misc_feature 536214..538187 /locus_tag="lmo0501" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" regulatory 538237..538242 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0501" gene 538251..538853 /locus_tag="lmo0502" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985250" CDS 538251..538853 /locus_tag="lmo0502" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar-phosphate isomerase" /protein_id="NP_464030.1" /db_xref="GeneID:985250" /translation="MDKQAILNNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECT GKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGG NTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTM AVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK" misc_feature 538254..>538850 /locus_tag="lmo0502" /note="D-arabinose 5-phosphate isomerase GutQ [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis]; Region: GutQ; COG0794" /db_xref="CDD:440557" regulatory 538867..538872 /regulatory_class="ribosome_binding_site" gene 538881..539348 /locus_tag="lmo0503" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985248" CDS 538881..539348 /locus_tag="lmo0503" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIA" /protein_id="NP_464031.1" /db_xref="GeneID:985248" /translation="MDVLEYFKEEMVRFSNEQNKEKLLAEMAEQLCEVGAVKPSYKDA VIKREKVFPTGLLTAHAGVAIPHTDSEHVIRPVVAVRILKKPVSFIEMASDNEAIDVR IVFMMALRSADEQLDMLQTLIQLIQDEEVMTTLLKAQETGDVLSAIEHFSKNN" misc_feature 538899..539324 /locus_tag="lmo0503" /note="PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_fru; cd00211" /db_xref="CDD:238129" misc_feature order(539022..539024,539079..539081) /locus_tag="lmo0503" /note="active site" /db_xref="CDD:238129" misc_feature 539079..539081 /locus_tag="lmo0503" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:238129" regulatory 539349..539354 /regulatory_class="ribosome_binding_site" gene 539365..539763 /locus_tag="lmo0504" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985256" CDS 539365..539763 /locus_tag="lmo0504" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0504" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464032.1" /db_xref="GeneID:985256" /translation="MGSFFASFVDWLIGSPGRFVVNLIEDNMLIFMVVVMIYATTILY AKWTLAYYLPKKMSQLAEMKTWELDELYAAWQTEKKALPWYILVPSRNEFWVKSARNA PESTKLLHFSQQKLKLSDKEKLQKIIEIQS" regulatory 539760..539765 /regulatory_class="ribosome_binding_site" gene 539774..540424 /locus_tag="lmo0505" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985251" CDS 539774..540424 /locus_tag="lmo0505" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ribulose-5-phosphate 3-epimerase" /protein_id="NP_464033.1" /db_xref="GeneID:985251" /translation="MAKIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNI AFGPDQIKMMKKGTKLQFDVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQL IKSYGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKA YIGNRPIQIEVDGGVNDELAKECTLAGADLIVVGSYLFEGDIEANLEKLAKGVLTE" misc_feature 539780..540400 /locus_tag="lmo0505" /note="Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; Region: Rpe; COG0036" /db_xref="CDD:439806" regulatory 540406..540411 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0505" gene 540421..541467 /locus_tag="lmo0506" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986275" CDS 540421..541467 /locus_tag="lmo0506" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sorbitol dehydrogenase" /protein_id="NP_464034.1" /db_xref="GeneID:986275" /translation="MKALKLYGKRDLRYEEADMPTIEEPDDVILKVKTVGICGSDISR YSKLGPYVPGMVWGHEFSGEVIEVGSEVTDIEIGDRAAGCPALYCGECEYCKKGEFAR CRKLTVIGARHPGAYAEYIKLPAENVVKIPNELDYEAAALVEPSAVVVHGFYHTKLQA GDDVVVVGSGNIGLLAIQWAKVFGARRVIAIDVDDKKLALAKEVGADVVINSLKEDPL EVVAAHTDGLNADLVVEAAGSPITSAQVFAYAKKGGGVVFLGIPYADVTIERFYFEKI VRSELTVWGSWNAISAPFPGKEWQTTIHFLANKQINIEPMITHRLSLAEGPEVFERIY ERNEFFGKVLFFPE" misc_feature 540421..541455 /locus_tag="lmo0506" /note="NAD(P)-dependent sugar dehydrogenases; Region: sugar_DH; cd08236" /db_xref="CDD:176198" misc_feature order(540532..540540,540547..540549,540850..540852, 540862..540864,540922..540939,540994..540999, 541009..541011,541054..541056,541126..541131, 541135..541137,541195..541200,541276..541284) /locus_tag="lmo0506" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176198" misc_feature order(540532..540534,540538..540540,540595..540597, 540850..540852) /locus_tag="lmo0506" /note="catalytic Zn binding site [ion binding]; other site" /db_xref="CDD:176198" misc_RNA 540670..540785 /locus_tag="lmo0506" /product="rli30" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986275" regulatory 541469..541474 /regulatory_class="ribosome_binding_site" gene 541483..541776 /locus_tag="lmo0507" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986799" CDS 541483..541776 /locus_tag="lmo0507" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS galactitol transporter subunit IIB" /protein_id="NP_464035.1" /db_xref="GeneID:986799" /translation="MKKKRIYVCCGTGIATSTVISKKVRAVLDEKRIPYEISQCTVQE VASKVSTSKPDIIVSSTTVTGDVGDVPVVIGRSFLTGLKKQETIDEILAILQD" misc_feature 541492..541767 /locus_tag="lmo0507" /note="subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC...; Region: PTS_IIB_galactitol; cd05566" /db_xref="CDD:99908" misc_feature order(541510..541521,541525..541533) /locus_tag="lmo0507" /note="P-loop; other site" /db_xref="CDD:99908" misc_feature order(541510..541512,541516..541521,541528..541533) /locus_tag="lmo0507" /note="active site" /db_xref="CDD:99908" misc_feature 541510..541512 /locus_tag="lmo0507" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99908" regulatory 541778..541783 /regulatory_class="ribosome_binding_site" gene 541791..543062 /locus_tag="lmo0508" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985255" CDS 541791..543062 /locus_tag="lmo0508" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS galactitol transporter subunit IIC" /protein_id="NP_464036.1" /db_xref="GeneID:985255" /translation="MDIILDFFKYIIGLGVTVMMPIIITILGVIFRKKISVAFKAGLT VGVGFVGLGVITSLMLTTITPVTKALVENYNFKLTATDIGWGVGSSLAWGTEVVPFVF VAIIATNILMIAFKWTKTMDVDIWNYWQPLFIASALYLTTGSMIIAVLSSIINMAIIF KIADWTQKDVEDVLGLEGISLPQIQTTGWALVGYPMNWLLGKIPGVRKINWSTEKVQS RLGIFGEPMLMGLIIGGGLAAIAQMPLSQVLQTGVTIAASLVLIPRMVSLLMDGLTVI SEAAHEFMEKRFPGRELFIGLDSAVGIGHPFVLSLGLLMIPITLILAFILPGNKVLPL ADLTALPFYMIFAIVPSKGNLFRGIFTGIVIVIITLYLSGAAAPLMTELAGQIGYNIP KDAVEVTSLAVGTQWYTWIVYYGLHWFGGIL" misc_feature 541791..543056 /locus_tag="lmo0508" /note="Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism]; Region: SgcC; COG3775" /db_xref="CDD:442989" regulatory 543079..543115 /regulatory_class="terminator" regulatory 543187..543192 /regulatory_class="ribosome_binding_site" gene 543202..544137 /gene="prs" /locus_tag="lmo0509" /db_xref="GeneID:985257" CDS 543202..544137 /gene="prs" /locus_tag="lmo0509" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoribosyl pyrophosphate synthetase" /protein_id="NP_464037.1" /db_xref="GeneID:985257" /translation="MAGKMKLFSVTSERPLATKIADYLDIPLCEVELQKFSDGEVKIN IEESIRGTNAYVVQSMNSNVNERLMELLIMVDALKRASVHSINIIMPYYGYARQDRKA RSREPITAKLMANLIQRAGANRLITVDLHAAQIQGFFNIPIDHLSAIPLIGDYLIENY GEKDVVVVAPDHSGVVRARRIADRLNAPIAILNRKPRPHEDEIMSVIGDVKGKVAIVV DDIIDTGVRATTSADILLEKGAVEVIACATHSVMAGNATERLQNSNIKEVITSDSIDL PEDKQFDKLTTISIGRILGRAIEGVQENRSLHPLF" misc_feature 543208..544134 /gene="prs" /locus_tag="lmo0509" /note="Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism]; Region: PrsA; COG0462" /db_xref="CDD:440230" regulatory 544153..544185 /regulatory_class="terminator" gene 544357..544716 /locus_tag="lmos21" /db_xref="GeneID:18245126" misc_RNA 544357..544716 /locus_tag="lmos21" /product="rliB" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245126" regulatory 544908..544913 /regulatory_class="ribosome_binding_site" gene 544923..545501 /locus_tag="lmo0510" /db_xref="GeneID:985258" CDS 544923..545501 /locus_tag="lmo0510" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0510" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464038.1" /db_xref="GeneID:985258" /translation="MKKILVPILLLATILASCSSPNEKITKDTKISKTITIRADYKVP KDIKELEDDSANIVKVKFLQNKTIGKDGSTISEIEILTSYKGNLEKGSKVDISEPWYL SDGKYVAVENYIALDKEQEYTIFLGEKDKDTYPLSSLGYGKFGGSLKEDQAVLADFNI LGEVQKFDFISENTEEVKNYQLIKEQVAGKYK" regulatory 545513..545544 /regulatory_class="terminator" regulatory 545596..545601 /regulatory_class="ribosome_binding_site" gene 545609..546289 /locus_tag="lmo0511" /db_xref="GeneID:985259" CDS 545609..546289 /locus_tag="lmo0511" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464039.1" /db_xref="GeneID:985259" /translation="MIIDVLQHVPHEGPGLIANWARENQHQLKIHSLFEENAHVPNDS DFLIVLGGPMGINDTAEFPWLKDERKLIKRLSEQHKPVFGVCLGAQQIAATFGSEITV NKEKEVGWFPVKRTSDKLLFFPKSLNVFHWHQDTFALPTGSTRLFASEGCLNQAFLYG ENIIGLQFHFEMEKAGIETILRIDEAFITPGKYVQSVEVMREKDVPEDNKQMLEAILD YLINPKTI" misc_feature 545615..546271 /locus_tag="lmo0511" /note="GMP synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism]; Region: GuaA1; COG0518" /db_xref="CDD:440284" regulatory complement(546271..546305) /regulatory_class="terminator" regulatory 546274..546308 /regulatory_class="terminator" gene complement(546314..546673) /locus_tag="lmo0512" /db_xref="GeneID:985264" CDS complement(546314..546673) /locus_tag="lmo0512" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0512" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464040.1" /db_xref="GeneID:985264" /translation="MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLL PDGDLQNMVVNIKLALPCDADQLDEDTIRAIIPYGTVTIEKMAGGMMTTSGIFLEDKE DKNDLMYIVNASVETGY" misc_feature complement(546320..546667) /locus_tag="lmo0512" /note="conserved hypothetical protein; Region: lin0512_fam; TIGR02058" /db_xref="CDD:131113" gene complement(546680..547138) /locus_tag="lmo0513" /db_xref="GeneID:985263" CDS complement(546680..547138) /locus_tag="lmo0513" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464041.1" /db_xref="GeneID:985263" /translation="MNNEQNMNQQIALFYFGYKAFTETADLIIAKHSLKRLHHRILFF TARMPGLTINELLTFLEISKQALHQPLAELKERELLTIEQGRRDKRQRCIFLTSAGKE LENELGAAQRKQMSEIFTNSADTDGMHFTEVMEGYAKNRPGAAFIKDFKE" misc_feature complement(546719..547138) /locus_tag="lmo0513" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" misc_feature complement(546866..547045) /locus_tag="lmo0513" /note="MarR family; Region: MarR_2; pfam12802" /db_xref="CDD:432797" regulatory complement(546682..546687) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0513" regulatory complement(547146..547151) /regulatory_class="ribosome_binding_site" regulatory 547508..547513 /regulatory_class="ribosome_binding_site" gene 547520..549337 /locus_tag="lmo0514" /db_xref="GeneID:985260" CDS 547520..549337 /locus_tag="lmo0514" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_464042.1" /db_xref="GeneID:985260" /translation="MKKALKLFLATICMFIMIYPSTAAHAEETNIVNIPDANLKTYLN GLLKQASDAPITKTQMNTIQTVTLSGSTYTDLTGLEEAGNLVTLSLNNTNIQTLEPIK NQTSLTYLTVGGDNVKDSLFVDLNGLVNLQSLSINGSEVTHNVFKTFNKLPKLTYLYA QNSMKITDISALASLPALTTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNTGRT NPRITLKSGKLDYNETNQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTYLGFNDVA LPSSRLSITDDGITVSGVTKEEFDNLDEIEYNARYDFPTGSYPTPPSMTSYTISSGTY DQYFDISHTLDLTADESFDYNQYDTTSEEQFLKDVHAETDDGTAVKSDFDQVVKLDVP GEYTVTLNAENAAGLKATPVTVKVTVHEKPVITSDSQISYKKETTKSVDEFLKEIHGS VTGNAVLTSDFDKVVDLNTPGEYTVTLNAINDRGQKADPVTVVVTVTTSDSGHVDPVP PTPQEETDQTIIPEPQSETTEDSVKEDQAKDGQAKSEEKADKTSLTTKENKVEKSEKT NQPKTKALPQTGDTNKTALPIAGVMLSLAALLIFRKSKS" misc_feature 547559..>548092 /locus_tag="lmo0514" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 547772..547837 /locus_tag="lmo0514" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 547838..547909 /locus_tag="lmo0514" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 547910..547981 /locus_tag="lmo0514" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 547982..548050 /locus_tag="lmo0514" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 548555..548773 /locus_tag="lmo0514" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature 548783..548986 /locus_tag="lmo0514" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature <549029..549331 /locus_tag="lmo0514" /note="pneumococcal surface protein PspC, LPXTG-anchored form; Region: PspC_subgroup_2; NF033839" /db_xref="CDD:468202" misc_feature 549239..549331 /locus_tag="lmo0514" /note="LPXTG-motif cell wall anchor domain; Region: LPXTG_anchor; TIGR01167" /db_xref="CDD:273478" regulatory 549423..549428 /regulatory_class="ribosome_binding_site" gene 549438..549869 /locus_tag="lmo0515" /db_xref="GeneID:986558" CDS 549438..549869 /locus_tag="lmo0515" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464043.1" /db_xref="GeneID:986558" /translation="MEKYHRILVAVDGSEPAKLAFEKGLELALKLDGVLGIASIVDLR AFSPNVSYDGSLEEKAELELKTSVNEYAEKARTAGVKQVETFVAKGNPKILLSTDIPA EFQADLIICGATGMNRVEKLVLGSVSSYIMAHAICDTLIAR" misc_feature 549456..549866 /locus_tag="lmo0515" /note="Universal stress protein family; Region: Usp; pfam00582" /db_xref="CDD:425765" regulatory complement(549864..549906) /regulatory_class="terminator" regulatory 549875..549917 /regulatory_class="terminator" gene complement(549916..551346) /locus_tag="lmo0516" /db_xref="GeneID:985267" CDS complement(549916..551346) /locus_tag="lmo0516" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="encapsulation protein CapA" /protein_id="NP_464044.1" /db_xref="GeneID:985267" /translation="MKKLTYVIITGLVLVFIAGAFWITNSTNQSDQKATQTEPIKKIS PANVKTISSEAKKTLNSLASSGADKASISDLKQLIKELKSYPTEKNDSGVYLQNLTAC LEAVKSYTTGKADEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKG VVTLTMVGDNSFGTYPETPEHLKFDNVFQKNNGNNTYVYKNCLPWFKSDDYTIINAES AFTNATKAENKMWRIKSDPAHVAFLPASGVDAANLANNHTMDYFQVGYDDTLKAFKEN NIPVFNADAPLETTIKGMKTVLLGYDCRMSQQSPAYLERIVKDVKKYKKEDTLVIVNM HWGVEYRETPTDYQTQFGHAILDAGADIIMGSHPHRLESVEKYKDKYIVYSMGDFAFG ADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAK KIVDELNRISKPIEGGVTEYTYFDPF" misc_feature complement(549940..550878) /locus_tag="lmo0516" /note="Poly-gamma-glutamate biosynthesis protein CapA/YwtB (capsule formation), metallophosphatase superfamily [Cell wall/membrane/envelope biogenesis]; Region: CapA; COG2843" /db_xref="CDD:442091" regulatory complement(551355..551360) /regulatory_class="ribosome_binding_site" regulatory complement(551418..551451) /regulatory_class="terminator" gene complement(551467..552282) /locus_tag="lmo0517" /db_xref="GeneID:985270" CDS complement(551467..552282) /locus_tag="lmo0517" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoglycerate mutase" /protein_id="NP_464045.1" /db_xref="GeneID:985270" /translation="MKKNIFKLLMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFY VVRHGKTMLNTTDRVQGWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDSGRAIQTA NLILKESDKSADKEVQTDPRFREFNFGSYEGDLNENMWTDIAKSQGKTLEEWQKAGLS PKDFANSVAALDKTRVKEGENWPAEDYATIQARLKEGLTDVAKKESKNGDSNVLLVSH GLSIGALLDTIEPGYKLPAEGIKNASVTKITYKDGKFTIGDVNDLSYVEKGSK" misc_feature complement(551500..552165) /locus_tag="lmo0517" /note="Broad specificity phosphatase PhoE [Carbohydrate transport and metabolism]; Region: PhoE; COG0406" /db_xref="CDD:440175" regulatory complement(552288..552293) /regulatory_class="ribosome_binding_site" gene 552327..552421 /locus_tag="lmos22" /db_xref="GeneID:18245127" misc_RNA 552327..552421 /locus_tag="lmos22" /product="rli52" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245127" regulatory complement(552517..552548) /regulatory_class="terminator" gene complement(552563..552931) /locus_tag="lmo0518" /db_xref="GeneID:985271" CDS complement(552563..552931) /locus_tag="lmo0518" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464046.1" /db_xref="GeneID:985271" /translation="MAILAFILTFIVMIEHIYIMILEMFFANTKLAAKTFGVEKELLA NKKVQTLFANQGLYNGFLAAGLVWGLFFAGAGFAETVQIFFLSCVVVAALFGGATSSK GILVKQGLPAVLALVAVLLV" misc_feature complement(552599..552931) /locus_tag="lmo0518" /note="Uncharacterized membrane protein [Function unknown]; Region: COG3759" /db_xref="CDD:442973" regulatory complement(552940..552945) /regulatory_class="ribosome_binding_site" regulatory 553064..553069 /regulatory_class="ribosome_binding_site" gene 553078..554493 /locus_tag="lmo0519" /db_xref="GeneID:985272" CDS 553078..554493 /locus_tag="lmo0519" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="multidrug resistance protein" /protein_id="NP_464047.1" /db_xref="GeneID:985272" /translation="MQQEATGGQKIRPIPIIASFLMAGFIGLFSETALNMALSDLIQV FDISSATVQWLTTGYLLTLGILVPISGLLLQWFTTRGLFFTAVSFSIAGTLIAALSPT FAMLMIGRVVQAVGTALLLPLMFNTILLIFPEHKRGSAMGMIGLVIMFAPAVGPTISG LILENLTWNWIFWISLPFLIIALLFGMKFMQNVSVVTKPKIDILSIILSTLGFGGVVF AFSSAGESGWGSATVLVSIIVGGIALGLFVWRQLTMEKPLMDLKVFKYPMFTLGLILV FISFMMILSTMILLPLYLQNSLALAAFSAGLVLLPGGVLNGLMSPFTGRLFDAYGPRA LVIPGFIVAVVALFFLTRIEVGTSALTIIVLHSVLMIGISMVMMPAQTNGLNQLPPKL YPDGTAIMNTLQQVSGAIGTAVAITIMSAGQKAYMETAQGVGPEQMVASLTAGIQNAF VFGLIMACIGLLCSLFIRKAK" misc_feature 553078..554490 /locus_tag="lmo0519" /note="lincomycin efflux MFS transporter Lmr(B); Region: MFS_efflux_LmrB; NF000060" /db_xref="CDD:411077" regulatory 554505..554538 /regulatory_class="terminator" regulatory 554610..554615 /regulatory_class="ribosome_binding_site" gene 554624..555628 /locus_tag="lmo0520" /db_xref="GeneID:985284" CDS 554624..555628 /locus_tag="lmo0520" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464048.1" /db_xref="GeneID:985284" /translation="MAIPRDLKELNKKNIKSILRQQGAMTKAEIAEVTGLSVVTVNKL IRDLVENEEILEQDNSVATGGRRAVSYEINPNFQQVLVISLQEKWKKITYSFSVYNLL GEPEFVEDMSGEDLDITALKRNTKDIICAFPKISCVVIGVPGIEIGGKLRAMDFPLLL NVQLRETLEAEVNLPVLVETDTNAAILGYKNRPMKEENIVGLYYPERFPPGAGLLMNG EILKGQNGLAGEIKHMPLQVDWDNFDFSVDEIKAHIRKMALLTMSFYDPETIVLYTNF YFGQKDFMEELKEELKQVYPYAVLPEIVLSRKFTTDYRIGLLAFGIDYLENNMTDWRI " misc_feature <554675..554848 /locus_tag="lmo0520" /note="helix_turn_helix, cAMP Regulatory protein C-terminus; DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family; Region: HTH_CRP; cl46859" /db_xref="CDD:481199" misc_feature order(554693..554695,554699..554707,554732..554734) /locus_tag="lmo0520" /note="non-specific DNA interactions [nucleotide binding]; other site" /db_xref="CDD:238044" misc_feature 554732..554752 /locus_tag="lmo0520" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238044" misc_feature order(554735..554740,554750..554752) /locus_tag="lmo0520" /note="sequence specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238044" misc_feature 554735..554740 /locus_tag="lmo0520" /note="putative cAMP binding site [chemical binding]; other site" /db_xref="CDD:238044" misc_feature <555023..555544 /locus_tag="lmo0520" /note="ATPase-like domain of the ROK (Repressor, ORF, Kinase) domain family; Region: ASKHA_ATPase_ROK; cd23763" /db_xref="CDD:466849" regulatory complement(555623..555651) /regulatory_class="terminator" regulatory 555634..555662 /regulatory_class="terminator" gene complement(555660..556976) /locus_tag="lmo0521" /db_xref="GeneID:985300" CDS complement(555660..556976) /locus_tag="lmo0521" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="6-phospho-beta-glucosidase" /protein_id="NP_464049.1" /db_xref="GeneID:985300" /translation="MTKGIKIATIGGGSSYTPELIEGFIKRQDELPVRELWLVDVEAG REKLEIVGNLAKRMVEKAGVDMEVHLTLDREEALKDADFVTTQLRVGLLDARVKDERI PNSYGVVGQETNGPGGMFKGLRTIPVILDICKDMERLCPDAWLINFANPAGMVTEAVL RYSNQKKVVGLCNGPIGIERNIAETLGVDVSEIYVEFVGLNHMVFAKTVYHNGKDVTK DVVFKMTEDEAGSSLKNINATGWDKTFLRTLNMIPIDYLRYYWQTKQQLEDQARAYAE HGTRAEVVKKVEAELFELYKQEELAEKPKQLEQRGGAYYSEAACNLINSIYNDKRDIQ IVNTRNNGAILDIDPDSAVETNCVITRQGPIPLASGRLPIAINGIIQEIKTFERLTAE AAVTGDYDKALLAMTINPLTPSESVAREMLDELLEAHKEYLPNFFK" misc_feature complement(555678..556964) /locus_tag="lmo0521" /note="Glycoside Hydrolases Family 4; Phospho-beta-glucosidase; Region: GH4_P_beta_glucosidase; cd05296" /db_xref="CDD:133432" misc_feature complement(order(556032..556034,556047..556049, 556113..556115,556527..556529,556533..556535, 556581..556583,556641..556643,556710..556718, 556836..556838,556854..556859,556929..556931, 556935..556940)) /locus_tag="lmo0521" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:133432" misc_feature complement(order(556032..556034,556044..556049, 556137..556139,556209..556211,556371..556373, 556458..556460,556527..556529,556641..556643, 556689..556691)) /locus_tag="lmo0521" /note="sugar binding site [chemical binding]; other site" /db_xref="CDD:133432" misc_feature complement(order(556371..556373,556461..556463)) /locus_tag="lmo0521" /note="divalent metal binding site [ion binding]; other site" /db_xref="CDD:133432" misc_feature complement(order(555873..555884,555888..555890, 555894..555899,555954..555956,555990..555992, 556338..556340,556347..556349,556395..556397, 556404..556406)) /locus_tag="lmo0521" /note="tetramer (dimer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:133432" misc_feature complement(order(555720..555722,555726..555728, 555732..555737,555765..555770,555777..555779, 555801..555803,555822..555824,555834..555836, 555855..555860,556185..556190,556194..556196, 556230..556238,556245..556247,556251..556253)) /locus_tag="lmo0521" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133432" regulatory complement(556985..556990) /regulatory_class="ribosome_binding_site" regulatory 557165..557170 /regulatory_class="ribosome_binding_site" gene 557178..557930 /locus_tag="lmo0522" /db_xref="GeneID:985274" CDS 557178..557930 /locus_tag="lmo0522" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464050.1" /db_xref="GeneID:985274" /translation="MLFLDKNLELNDTELDIYNYIVANLDKVVYMRIRDLATEAHVST TTILRFCRKFGCNGFSEFRVKLQLYLEEQKLAQIDMADETTYIDFLKRTAQPEFKAQI QNAVEILRDRELVLFAGVGSSGVIAEYGAIYFSSLFTLALHIEDPLNHPFYHLSSKLS DKICMIAISVEGENEDIIRYIHQLKAQNCKVISITNSAKSTIARLSDANIAYYINKEM YQEANITSQLPALYTIENIAREIRTQIDKEKM" misc_feature 557202..557900 /locus_tag="lmo0522" /note="DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains [Transcription]; Region: RpiR; COG1737" /db_xref="CDD:441343" regulatory 557939..557975 /regulatory_class="terminator" regulatory 558024..558029 /regulatory_class="ribosome_binding_site" gene 558037..558480 /locus_tag="lmo0523" /db_xref="GeneID:985275" CDS 558037..558480 /locus_tag="lmo0523" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464051.1" /db_xref="GeneID:985275" /translation="MYSNMKEKVVFTLIMCSLMILCMSSYNIFLENGIGTDSLMIILK AFVPFLFIGFLLDFFVVGKIANRLHALLVSEDASKFKKIIMMQLLMVTFMCVLMSTLS LIVNQGEWSHLGILILRNYFVALFLQIFIVSPFVRLISPRIFALL" regulatory complement(558480..558520) /regulatory_class="terminator" gene complement(558526..560187) /locus_tag="lmo0524" /db_xref="GeneID:985278" CDS complement(558526..560187) /locus_tag="lmo0524" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sulfate transporter" /protein_id="NP_464052.1" /db_xref="GeneID:985278" /translation="MFKHILLSLNGYKISYLRNDVISGVGVAALTIPVAMGYAQVAGL PPIYGLYASFLPVIAYVIFASSPQLIFGIDATASAITGSIILGTAGLAAGSKEAIALA PILAFFCAIFLVLFSVLKLGRFAKYISAPVLSGFISGLSVSIIMGQIPKIMGLKESGD SFFSSLGIIFGQFFQSNWISFAMGVVTVIIVITCKKVIPKIPMSLVVLVLGTMAAYFF KLDQYNVDIVGKIPVGFPSLALPDFGASSWALAIGGGLVCAIATFAGSLLPSESFAMR NKYTIDDNRELFAYGVSNFVAAFSGCSPASASVSRTAANEQFRGKTQMVSIVAATIIA LIVAFLSGLLYYMPQPVLSGIVFAALVGIIDVDVLKGLFKVSRREATVWIVAALGTLL VGVIFGVLLGIFLSFINVVSRSMKTPIAILGVIEGRHGYFDLKRKSEAKPIPNVVIYR YSASLFFGNFNKFADGLKEAVQDDTKLVIFEASAIINIDTTATESMKDLLKWLDDKGI EYYFADLIDHLKTSFRKHDLGYLIDNGYTKKTVEDALDAYYAEHK" misc_feature complement(558532..560157) /locus_tag="lmo0524" /note="Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism]; Region: SUL1; COG0659" /db_xref="CDD:440424" regulatory complement(560193..560198) /regulatory_class="ribosome_binding_site" regulatory 560428..560433 /regulatory_class="ribosome_binding_site" gene 560443..561774 /locus_tag="lmo0525" /db_xref="GeneID:985282" CDS 560443..561774 /locus_tag="lmo0525" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0525" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464053.1" /db_xref="GeneID:985282" /translation="MATQKNLVDLATKAYIYGFPFIFNTQQIERYVTVGIGGTKQVPF NNFTHASRLAEPSDKFVSVNNDTIYSNAPIDVSAGPVVLSVPDTSGRYYVLQFVDAWS NNFAYVGKRATGTSAGKFLLTPPNWNGDVPADMIEIKFPTNIGIIIGRLACDGEADLP TVRELQEQLKITPLNEGKEVDGFPEYDRSLGKELAFFEQLRVYMAQFPPAERDLVKQE SFAPIGLMEKGVSPYSNPSEELKNALIEGAKAGLANIKKATTNFKSENGWGLTQHLFD YNADFFEIGTKKSLDWVIEDREEAYIIRAVSAITALWGNHGYEAVYLMTWTDTDGNAL NGKNKYTLELNPIPPVDSFWSITMYDLPEYFLCENPINRYSIGDRTPGIQYNDDGGIT IVVSKDEPTDPKERANWLPAPDAEFRPMFRLYNPQQPLVDGSYHFPGFEKK" misc_feature 560467..561768 /locus_tag="lmo0525" /note="Uncharacterized conserved protein [Mobilome: prophages, transposons]; Region: COG5361" /db_xref="CDD:444136" regulatory complement(561772..561813) /regulatory_class="terminator" regulatory 561783..561824 /regulatory_class="terminator" gene complement(561819..562559) /locus_tag="lmo0526" /db_xref="GeneID:985281" CDS complement(561819..562559) /locus_tag="lmo0526" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464054.1" /db_xref="GeneID:985281" /translation="MQIKELAELTGVSVRTLHHYDKIGLLVPQKDDWNGYRIYSEKDV DKLQQILFFKELDFPLKKIQQILDDPLFDKNVALDMQRHLLIEKKQRIETMLATLDLT IKNEKGEITMTNKEKFTGFDFSSNPYEEEARKLWGDKVVEKANEKVNNMSEKEQLTLK ESFDAEFRHLASVRKLTPESEEAQLEIDHFFHYLNDTHGNIYSLEAFASLGEMYVNDE RFTKNIDQFGDGLSQFLQEAMTIYAKNK" misc_feature complement(562251..562559) /locus_tag="lmo0526" /note="Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA; Region: HTH_TipAL-Mta; cd01106" /db_xref="CDD:133381" misc_feature complement(order(562449..562457,562506..562508, 562548..562556)) /locus_tag="lmo0526" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133381" misc_feature complement(order(562272..562277,562284..562286, 562296..562298,562314..562316,562326..562328, 562362..562364,562389..562394,562404..562406, 562413..562415)) /locus_tag="lmo0526" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133381" misc_feature complement(561834..562178) /locus_tag="lmo0526" /note="TipAS antibiotic-recognition domain; Region: TipAS; pfam07739" /db_xref="CDD:462248" regulatory complement(562568..562573) /regulatory_class="ribosome_binding_site" regulatory 562775..562780 /regulatory_class="ribosome_binding_site" gene 562789..564264 /locus_tag="lmo0527" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985287" CDS 562789..564264 /locus_tag="lmo0527" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transmembrane protein" /protein_id="NP_464055.1" /db_xref="GeneID:985287" /translation="MIRKVKSISMWLWHHLTPQIFAVICVFIITIIALFMPPYIGMAD NGDFFRIFSSNGLFVNNTNYDALQFGHFVKEFGIYQYFNENQVAIYSSQSIFIQMALL LNKLFWSTTVFDVRFLGGLQLALLLPAIYLLVAGLTAKMKGWPGYVVAALTVFIFADT AYTAYFNSFFSEGLILIMMLYISAGFLLLYQHKYNDYAMLGLIFVASLILITAKQQNA PIAVVIAVCGILVFFIRKNRAFRISAAATFLVIFLSGVVMYAFIPGEFVTINQYQTMT RGVLLDSENPEKSLEEMGMNSEFALLKGTNFYQKYKMIDLDSKLMEKEFYPNYNFVTV LSYYLENPKQFGKMLDLSAQNSFSIRPFEMGNFEKATGYKFKEKTHFFSAYSDVKEKF APAKFTFLILWALVFLICYGVSAFKHFREKNIRGTLLFDLIVLLIGSGFAVILVTIVG DGEADLTKHNFLFNVCFDLTMLIGAASLLEVYLKKRGERNA" regulatory 564242..564247 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0527" gene 564257..565753 /locus_tag="lmo0528" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985299" CDS 564257..565753 /locus_tag="lmo0528" /experiment="EXISTENCE:[PMID:19448609]" /note="hypothetical secreted protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464056.1" /db_xref="GeneID:985299" /translation="MRKKMIISILLAFVIFIVGGHSAIAKTDDGVVVFYDSLATGTEN EGNMDALLRMLNSLGKRVTIYSWEENPDLSQTSEIIVLQNKNDGLANDWTEKLAKSKA KIAYIGGNPPTFLTDKLQLKTKAITDASITIQTEAGLSGKPQLVNETNLITSYKGTSF GEMDAAENGQAAYGVQAGNYAYAPLFQTDNTSEFTLMDVLKALFDIKTTTNQYAFITG VNPFVDFDLLKKTADTFYEKGIPFIVSAGPVFYNQDFQAAKNYAEILRYVQAKNGTIM LNVPAVTYGDSPSGELESIMQKSVNFFAENDIAPIGVTAELYWNFDKAYGVEGFAPFN TGILLPNQKIIHTTKVNNGSAFEKSPYSVANDFYATTTEGRNFPVDIAITYSFFDNEK ELKAAAEELANDNISDFRFQNHGVKTNKDTIESSAGSLYINNQPVALDGDLNYIKTKN KAVKQTGSLEGFFGYQNTFFTIVIILSLGIIGVLFVFGYRLYMKKYMK" misc_feature <564722..>565090 /locus_tag="lmo0528" /note="Predicted metal-dependent carbohydrate esterase YdaL, contains NodB-like catalytic (CE4) domain [General function prediction only]; Region: YdaL; COG5298" /db_xref="CDD:444100" regulatory 565750..565755 /regulatory_class="ribosome_binding_site" gene 565764..567014 /locus_tag="lmo0529" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985294" CDS 565764..567014 /locus_tag="lmo0529" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glucosaminyltransferase" /protein_id="NP_464057.1" /db_xref="GeneID:985294" /translation="MVVADYLALFAVICIWGLLLINIVLIVAGYVYYLKNEARKVPEI PVEVPFVSVMVPAHNEGKVIVKTVESLLAFDYPVDRYEIIVINDNSSDNSAELLAAIQ AKNPTRFLKIINTDNITGGKGKSNALNIGFAESRGELVAIYDADNTPERQALRILVGE ITNDAKLGAVIGKFRTRNRNASWLTRFINIETLSFQWMAQAGRWALFKLCTIPGTNFI VRRSLLEEIGGWDVKAVAEDTEISFRIYMMGYRIKFQAKAVTWEQEPQTLPVWFKQRS RWAKGNIYVILKNVPLLFKREGRRVRFDILYFLSIYFLLLTSLIVSDVLLVLYALGLV HTTLAGLSGALWLLAILLFVAGTFITLTTEKGEISFSNLLFIMLMYVTYCQLWMVVAA YGFFIFLKDTVLKRETKWYKTERF" misc_feature 565818..566846 /locus_tag="lmo0529" /note="Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]; Region: BcsA; COG1215" /db_xref="CDD:440828" misc_feature 565920..566477 /locus_tag="lmo0529" /note="CESA_like is the cellulose synthase superfamily; Region: CESA_like; cd06423" /db_xref="CDD:133045" misc_feature 566193..566201 /locus_tag="lmo0529" /note="DXD motif [active]" /db_xref="CDD:133045" regulatory 567017..567022 /regulatory_class="ribosome_binding_site" gene 567030..569081 /locus_tag="lmo0530" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984571" CDS 567030..569081 /locus_tag="lmo0530" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0530" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464058.1" /db_xref="GeneID:984571" /translation="MKKFTVMWLLIFAVLFLYRPEVFAADKNYQTVFGTDKTAQGKFT TTKQNFTVENYWDVSNANVKLVYTITQLSEKEVSTMTLKINDVAFYSFKPDKADKGTK QIEIEIPKDKLKKGVNVLSIESFVYTDLPDGRCTIDDTPANWLQFDKTSAINVSYSDK AFQKTIAEFGERFTGIDTVKSEQGAVAVSNKAGDAELGAALEGLSGFSAANTLEDKNI AFGQYEEAKIRDGKNYLVLFSSYDNLPNDLKLQIKDDNKLEKQALFQVVTVGNANTLV ITSKSNDALKKAGKLIANQNYLSQLGTNTKWLTTDERIDTPATSVDKNTKLTTTGDKL KGIGHITQDYFISMPANRSASTGTEVSLDFRYAQNLDFEHSLVTILVNGKPIGSQKLT AKKANGDKLTFQIPSDLNVKGDFSVTVAFDLVLTNNYCGFIADSEIPWAYITPESKIN LNTSEETDLLFEQYPYPFIANGDFNNAVVVVPDELTTEDTDSLANIFNLLGRFHDGNR GDLTAVHAANWKKPKEESNVIAVGTMNNNPVIKNANDDLYFQYNKTGDYFLSNEKISI EKNYGKQLGSVQLITSDGVPILAVTGPGAKQTELGSDLIATKANLAKIYGDGAIVDTD NTIHSYRFKKEADTQEESFGAKISNNKEVTVFGAFALLTVVILVVAVLLILRKYRRSR K" misc_feature 567174..568685 /locus_tag="lmo0530" /note="Bacterial cellulose synthase subunit; Region: BcsB; cl15851" /db_xref="CDD:449603" regulatory 569081..569086 /regulatory_class="ribosome_binding_site" gene 569094..569948 /locus_tag="lmo0531" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985297" CDS 569094..569948 /locus_tag="lmo0531" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0531" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464059.1" /db_xref="GeneID:985297" /translation="MKKITNNLFADIGFLFFILLCFITIGFMINTPDEYLRNIILLNI TFLLVIITYFTNLTLGLILNVLYIFIYATYIIYEIVANQIAYGFGSYFWLIITPLFTV ASAMFTRNTSRLQEENTKIKQQNLYLGTIDQETLLKNIVSFQNDERIFSSISRRYDLP LSLMVIKVRHWRELKRFQSEDEMRLALQDISAILETCIRTSDVLYLLDKDDATWGLLL LTDEPGGKLVADRIKSRIAEANTEEFAAKYRVKLELRIGTSQFDSEKVKTPLDFIDLA TKELEYDV" misc_feature 569127..569885 /locus_tag="lmo0531" /note="GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants [Signal transduction mechanisms]; Region: GGDEF; COG2199" /db_xref="CDD:441801" regulatory 569953..569998 /regulatory_class="terminator" regulatory 569996..570001 /regulatory_class="ribosome_binding_site" gene 570008..570838 /locus_tag="lmo0532" /db_xref="GeneID:985308" CDS 570008..570838 /locus_tag="lmo0532" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0532" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464060.1" /db_xref="GeneID:985308" /translation="MNLEEIVDCMLLNENDKEIQRTQTEHRIKLVDFWRVKKGDRVLE VGCGQGDTTAVLANAVGASGFVQGIDIAPRTYGAPFTIGDATDHLQKSKLGAQIDFKL GTDILKGDITFPDNAFDVAVLSHASWYFSSKSELTLMLELLSKWAKRVCYAEWDTRIT DVKQTSHMLAVLTQSSYEAFKQETQSNIRTFITPIDMQEIIQEHNWKMGAETSIFSEK MQDSRWEIGYVKDFITKELEADLGLPEKFKAFLLSQSKLITLENSLPMASYYTSWQAK " misc_feature 570080..>570400 /locus_tag="lmo0532" /note="Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Region: UbiE; COG2226" /db_xref="CDD:441828" regulatory 570903..570908 /regulatory_class="ribosome_binding_site" gene 570916..571185 /locus_tag="lmo0533" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985302" CDS 570916..571185 /locus_tag="lmo0533" /experiment="EXISTENCE:[PMID:19448609]" /note="ACT domain-containing protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464061.1" /db_xref="GeneID:985302" /translation="MRAVLTVIGKDNVGIVAGVSNKLAELNINIVDVSQTIMDGYFTM MMMCDISQITKEFDEVKAELAGKGEDLQVKIHIQREEIFNAMHKL" misc_feature 570916..571182 /locus_tag="lmo0533" /note="ACT domain-containing protein; Region: PRK00194" /db_xref="CDD:178923" regulatory 571188..571193 /regulatory_class="ribosome_binding_site" gene 571204..572559 /locus_tag="lmo0534" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985301" CDS 571204..572559 /locus_tag="lmo0534" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464062.1" /db_xref="GeneID:985301" /translation="METNQILETIRMIEEEKLDIRTITMGISLLDCMDGDGEAARKKI YQKIVTKARNLVAVGEAIESEFGIPIINKRISVTPIAIIAGSSADTDYVEFAKTLDAA AKEVGVNFIGGYSALVQKGYTKGDEILIRSIPQALAQTERVCSSVNVGSTRTGINMDA VRQMGEVIKETADLTADTQGLGCAKLVVFANAVEDNPFMAGAFHGVGEADCVINVGVS GPGVVKRAIEKVKGEPFDIVAETVKQTAFKITRMGQLVGQVASEKLGVPFGIVDLSLA PTPAIGDSVAHILEEMGLEMVGTHGTTAALALLNDAVKKGGVMACGHVGGLSGAFIPV SEDAGMIEAVQQGALNLEKLEAMTAICSVGLDMIAVPGDTTAETLAAMIADEAAIGVI NNKTTAVRVIPASGTKVGDMVEFGGLLGTAPVMPVNGKSSVDFIARGGRIPAPIHSFK N" misc_feature 571204..572556 /locus_tag="lmo0534" /note="Uncharacterized conserved protein, UPF0210 family [Cell cycle control, cell division, chromosome partitioning]; Region: COG2848" /db_xref="CDD:442096" regulatory complement(572557..572594) /regulatory_class="terminator" regulatory 572568..572605 /regulatory_class="terminator" gene complement(572600..573568) /locus_tag="lmo0535" /db_xref="GeneID:985755" CDS complement(572600..573568) /locus_tag="lmo0535" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="NP_464063.1" /db_xref="GeneID:985755" /translation="MANIQEIAKLAGVSSATVSRVINKRDYVSDETRKRVQTIIDKLD YVPNINAVSLKKGATKLIGMVIPSFTDSLNVFLKSFTMIAQEHGYNVTLFMTRIDPDK ELEALEMLRQKQIDALVLVIRSNDWKTIEHYTKYGPIVTWQRVESEKIPSVFMNQYDG YTLGLEHLYAKGYRKFVNVYGNTTGLNTQSRMLAFKDFCARYELDPHEFRQFYGQGSR QDGEKIAHWFAETEHKPDAFLTPNDYFAAGLLTEARRLGYSVPEDFAICGFDNMEVAH LLDITTIHYPVNLQAENAFMLIMNQLFGSDLPLLDLDFRLVERKTT" misc_feature complement(573356..573565) /locus_tag="lmo0535" /note="helix_turn _helix lactose operon repressor; Region: HTH_LACI; smart00354" /db_xref="CDD:197675" misc_feature complement(order(573404..573409,573413..573418, 573425..573427,573434..573436,573473..573475, 573482..573487,573500..573502,573509..573514, 573518..573532,573554..573556)) /locus_tag="lmo0535" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143331" misc_feature complement(573407..573436) /locus_tag="lmo0535" /note="domain linker motif [active]" /db_xref="CDD:143331" misc_feature complement(572612..573385) /locus_tag="lmo0535" /note="ligand-binding domain of a novel transcription factor implicated in catabolite repression in Bacillus and Clostridium species; Region: PBP1_CcpB-like; cd06286" /db_xref="CDD:380509" misc_feature complement(order(572714..572716,572753..572755, 572759..572764,572846..572848,572921..572923, 572996..572998,573026..573028,573140..573142, 573203..573205,573350..573352)) /locus_tag="lmo0535" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:380509" misc_feature complement(order(572804..572809,572816..572818, 572828..572830,572912..572914,573227..573235, 573242..573244,573251..573253,573284..573286, 573290..573304,573323..573328,573332..573337, 573344..573352)) /locus_tag="lmo0535" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:380509" regulatory complement(573579..573584) /regulatory_class="ribosome_binding_site" regulatory 573724..573729 /regulatory_class="ribosome_binding_site" gene 573740..575062 /locus_tag="lmo0536" /db_xref="GeneID:985314" CDS 573740..575062 /locus_tag="lmo0536" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="6-phospho-beta-glucosidase" /protein_id="NP_464064.1" /db_xref="GeneID:985314" /translation="MKKGVKIVTIGGGSSYTPELVEGFIKRYHELPIRELWLVDIEAG REKLEIVGNMAKRMVKAANIDCEVHLTLDRREALKDADFVTTQFRVGLLDARIKDERI PLSHGIIGQETNGAGGMFKAFRTIPVILGIVEDMRELCPDAWLINFTNPAGMVTEAVL RYGNWDKVIGLCNVPIGAVKSASDVLEKPEEDLFFKFAGINHLHWHRVFDKDGTELTE KVIDGLYAPDANPGKVVENIKNMRFLYEQVKHLKMLPCPYHRYYYMTDAMLEEELASF KNEGTRGEVVKKLEDSLFELYKDPNLDYKPEELSKRGGAHYSDAACEIINSIYNNKGT VMVVSTRNNGAIDDVPYDSAVEITSVIRAHGAEPINFGKFPPAQRGLLQVMKSMEELT IEAAVTGDYATALQAFTSNPLVPSGDLAKTILDEMLEAHKEFLPQFAK" misc_feature 573755..575044 /locus_tag="lmo0536" /note="Glycoside Hydrolases Family 4; Phospho-beta-glucosidase; Region: GH4_P_beta_glucosidase; cd05296" /db_xref="CDD:133432" misc_feature order(573776..573781,573785..573787,573857..573862, 573878..573880,573998..574006,574073..574075, 574133..574135,574181..574183,574187..574189, 574607..574609,574673..574675,574688..574690) /locus_tag="lmo0536" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:133432" misc_feature order(574025..574027,574073..574075,574187..574189, 574256..574258,574343..574345,574511..574513, 574583..574585,574673..574678,574688..574690) /locus_tag="lmo0536" /note="sugar binding site [chemical binding]; other site" /db_xref="CDD:133432" misc_feature order(574253..574255,574343..574345) /locus_tag="lmo0536" /note="divalent metal binding site [ion binding]; other site" /db_xref="CDD:133432" misc_feature order(574310..574312,574319..574321,574367..574369, 574376..574378,574730..574732,574766..574768, 574823..574828,574832..574834,574838..574849) /locus_tag="lmo0536" /note="tetramer (dimer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:133432" misc_feature order(574469..574471,574475..574477,574484..574492, 574526..574528,574532..574537,574862..574867, 574886..574888,574898..574900,574919..574921, 574943..574945,574952..574957,574985..574990, 574994..574996,575000..575002) /locus_tag="lmo0536" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133432" regulatory 575070..575105 /regulatory_class="terminator" regulatory 575152..575157 /regulatory_class="ribosome_binding_site" gene 575166..576437 /locus_tag="lmo0537" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985309" CDS 575166..576437 /locus_tag="lmo0537" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="allantoate amidohydrolase" /protein_id="NP_464065.1" /db_xref="GeneID:985309" /translation="MQTNLERIKKHIEKLDTFTATPGQGTTRLTYSKEDLDARNYLKQ EMAKVGLTVSEDAIGNIYGRLEGESPDLPAVIVGSHFDSVPNGGAFDGPAGVITGLEV ASVFHEQQIKPHFPLEIIAMVEEEGSRFGAGLLASRAITGKVTTEMLHEMKDIDGITA TDAMAKLGFNANRVHRAIRTKESVKAFIELHIEQGPILENASEDVALVDTVVGLTQIK VTVKGQAGHAGTTPMLDRKDALVSAVEILGQLPELAIQEGGGTVLTVGKLNVYPNGAN VIPDKVIFTVDIRAKDEIHVQNTLAKTKEIIQATEKNGITCEIKDMIYQQPTHLSKEI HQALTESADQLGFKYRTMVSGAGHDAMIFASLTEVGLIFVPSHNGISHAPEEWTDYDK LQKGIEVVLKTVKKWTEESANESENKTNSFK" misc_feature 575166..576395 /locus_tag="lmo0537" /note="allantoate amidohydrolase; Reviewed; Region: PRK09290" /db_xref="CDD:236456" regulatory 576388..576393 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0537" gene 576403..577584 /locus_tag="lmo0538" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985381" CDS 576403..577584 /locus_tag="lmo0538" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="N-acyl-L-amino acid amidohydrolase" /protein_id="NP_464066.1" /db_xref="GeneID:985381" /translation="MNQKIKQIVLNNESEMIAFRRDLHMHPELQWQEFRTTDQVAKEL DKLDIPYRRTEPTGLIAELKGGKSGKTVALRADMDALPVQELNQDLPYKSTEDGKMHA CGHDAHTAMLITAAKALVEIKDELPGTVRFIFQPSEEIAEGAKEMIAQGAMEDVDHVF GIHIWSQTPSGKISCVVGSTFASADIIQIDFKGQGGHGAMPHDTIDAAVIASSFIMNL QAIVARETDPLDPVVVTIGKMDVGTRYNVIAENARLEGTLRCFNNTTRAKVAKSIEHY AKQTAAIYGGTAEMIYKQGTQPVINDEKSALLVQETITESFGEEMLYFERPTTGGEDF SYFQDEAPGSFALVGCGNPEKDTEWAHHHGRFNIDESVMKNGAELYAQFAYNYLNQAE I" misc_feature 576448..577566 /locus_tag="lmo0538" /note="M20 Peptidase aminoacylase 1 subfamily; Region: M20_Acy1-like; cd08019" /db_xref="CDD:349940" misc_feature order(576958..576960,577024..577029,577039..577041, 577048..577050,577057..577059,577108..577128, 577138..577143,577147..577149,577165..577173) /locus_tag="lmo0538" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:349940" regulatory complement(577582..577621) /regulatory_class="terminator" regulatory 577593..577632 /regulatory_class="terminator" gene complement(577632..578648) /locus_tag="lmo0539" /db_xref="GeneID:985316" CDS complement(577632..578648) /locus_tag="lmo0539" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources" /codon_start=1 /transl_table=11 /product="tagatose 1,6-diphosphate aldolase" /protein_id="NP_464067.1" /db_xref="GeneID:985316" /translation="MVQITKGKFDGLQRLSNDKGVIAALAIDQRGSLKKMIQQAKGTE NKKDVEDFKQLVSEELTPYASAILLDLEYGTPAIKARHEGSGLLTSYEKTGYDATTPG KLPDLIEDLSALRIKENGGDAVKILVYYDPDEPAEINEIKYAFLERIGAECRAVDIPF FLEPITYDATVTDSGSLEYAKLKPAKVKASIKEFSKPRYGVDVLKLEVPVNFKYVEGF AEGEVAYTQDEAARHFEECSDLSPLPFIYLSAGVTSEMFHKTIQFANQHNVQYSGVLC GRATWADGIEVYGKQGDDALREWLRTQGKENITSLDKLLDEGAVPWWTKYGSFEDVHV VEKQ" misc_feature complement(577671..578639) /locus_tag="lmo0539" /note="tagatose 1,6-diphosphate aldolase; Reviewed; Region: PRK12399" /db_xref="CDD:183502" regulatory complement(578659..578664) /regulatory_class="ribosome_binding_site" regulatory 578874..578879 /regulatory_class="ribosome_binding_site" gene 578886..580079 /locus_tag="lmo0540" /db_xref="GeneID:985229" CDS 578886..580079 /locus_tag="lmo0540" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="penicillin-binding protein" /protein_id="NP_464068.1" /db_xref="GeneID:985229" /translation="MNRRERRKHKRRKNMIIVLSTVFLMFIATSWMIYEFKSKQEQTV SAPTKKKAATATNPSENAATNEPEETKDPEPVEEKPKETIVKNQEIDNYLQKIGFSGS ALVVRDGETIIQKGYMYANRDDKVLNTPDTLFYIGSSQKAIIATALLQLEEKGKINTN DPISKYIPDFPNGNKILVKNFMNHTSGIVGRPNLTSNMTPDQIVKAIEKRGIKSQPGK WDYMDANYTVVGYLVEKISGQPLATYLQENIFNPAGMKHTGYYQKDVDGGKNVSTGYK IDENGVFQSPKLADLTKLYGAGDISMSTTDMYLFDKALMDKKLISEASLKKMFTKGSK STYGMGFYVDPGSYNSHGVVTGWDVSNSFSHTGRTYVILFSNVQNYIASFGKVNNDIY GFLNK" misc_feature 579147..579995 /locus_tag="lmo0540" /note="CubicO group peptidase, beta-lactamase class C family [Defense mechanisms]; Region: AmpC; COG1680" /db_xref="CDD:441286" regulatory complement(580076..580110) /regulatory_class="terminator" regulatory 580087..580121 /regulatory_class="terminator" gene complement(580119..581039) /locus_tag="lmo0541" /db_xref="GeneID:986277" CDS complement(580119..581039) /locus_tag="lmo0541" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter substrate-binding protein" /protein_id="NP_464069.1" /db_xref="GeneID:986277" /translation="MYQKHKWAAILMTVLLAVVLTACGSSSDKDSSKEKESATKTVTD TTDRKVEVPTTPKRIVALQNVSEMEILGVKPVGTTDYYITTYPDATKGTESVGNDKPS IEKIANLKPDLIIISDYQKDLLENLEKVAPVYITHFGDTPDKQLSNIANLLNKKAEKE KWDKDYAASSKEAKATLKDAGVANEKAAVIQFYGKEIYVHDAKVFDGLYSGAGFTPTD AAKANKETKAISSEAIPEYAAGADRLFILMPADGNTDSVDEMLKGVWKDIPAVKKNQV YKVDNTKWSDYSAAAQLYQMEDAVKQITGK" misc_feature complement(580173..580898) /locus_tag="lmo0541" /note="Helical backbone metal receptor (TroA-like domain). These proteins have been shown to function in the ABC transport of ferric siderophores and metal ions such as Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is formed in the interface between...; Region: TroA-like; cl00262" /db_xref="CDD:469696" misc_feature complement(order(580587..580589,580653..580655, 580662..580667)) /locus_tag="lmo0541" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:238347" regulatory complement(581049..581054) /regulatory_class="ribosome_binding_site" gene complement(581150..581500) /locus_tag="lmo0542" /db_xref="GeneID:984602" CDS complement(581150..581500) /locus_tag="lmo0542" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS sorbitol transporter subunit IIA" /protein_id="NP_464070.1" /db_xref="GeneID:984602" /translation="MTISKIMEIGPLVPAFEEEKIVILFGPTATNELREISVIHEFQD APNNALTKGNTLLIGEQVYTIEEVGTDANKNLEELGHISVYFRSGQNEVLPGAIVVSP EVFPTITVGDSIQF" misc_feature complement(581159..581491) /locus_tag="lmo0542" /note="PTS system glucitol/sorbitol-specific IIA component; Region: PTSIIA_gutA; pfam03829" /db_xref="CDD:427533" regulatory complement(581509..581514) /regulatory_class="ribosome_binding_site" gene complement(581519..582505) /locus_tag="lmo0543" /db_xref="GeneID:984396" CDS complement(581519..582505) /locus_tag="lmo0543" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS sorbitol transporter subunit IIBC" /protein_id="NP_464071.1" /db_xref="GeneID:984396" /translation="MYQSIHVNKGQGGWGVGLDITPSEPRTKVVSITGGGIHPVALRI AELSGAEAVDGFKNSIPEEEMMCVVIDCGGTARIGVYPMKRIPTVDVLPSSPSGPLAK HITEDIFVSGVKPEDIEVRDISAEPGKPFDREKFKEDYAKIKEDQKEASELKEGFLVK FSRGIGKAMGVFYQAGRDSVDMLIKNIIPFMAFISMIIGIINYTGIGKLIANTLSPLA GSLWGMLLIAFICSLPFLSPILGPGAVIAQVIGVLIGSQIAIGAIPVTYALPALFAIN AQAGCDFIPVGLSLAEAKPKTVQFGVPAILYSRMITGVLAVVIAWVFSIGMY" misc_feature complement(581522..582505) /locus_tag="lmo0543" /note="Phosphotransferase system sorbitol-specific IIB component [Carbohydrate transport and metabolism]; Region: SrlE; COG3732" /db_xref="CDD:442946" regulatory complement(582514..582519) /regulatory_class="ribosome_binding_site" gene complement(582526..583047) /locus_tag="lmo0544" /db_xref="GeneID:986622" CDS complement(582526..583047) /locus_tag="lmo0544" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS sorbitol transporter subunit IIC" /protein_id="NP_464072.1" /db_xref="GeneID:986622" /translation="MNYIEWFGTNFIGLFEAGGKQFVSFMTGIVPLLIVLLTFTYSII AFIGEERVNRAIQFSAKNMILRYTLMPVLSVLMLTNPMAYTFGRFVKEHQKPAFYDSV VSFLHPVTGLFPYANAGELFVYLGIANGVVEAGYSMSSLAVRYFLAGIVVILMRGVIT ETITKFLMRKEKV" misc_feature complement(582529..583047) /locus_tag="lmo0544" /note="Phosphotransferase system sorbitol-specific IIC component [Carbohydrate transport and metabolism]; Region: SrlA; COG3730" /db_xref="CDD:442944" regulatory complement(583056..583061) /regulatory_class="ribosome_binding_site" gene complement(583072..583452) /locus_tag="lmo0545" /db_xref="GeneID:984402" CDS complement(583072..583452) /locus_tag="lmo0545" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0545" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464073.1" /db_xref="GeneID:984402" /translation="MNIVLIASLIFIAQTCLGFFQVKYYQHHMNKVANKYAGKIGYHL YSEMERLKFRTSAVAILVVNENHIVHECQILTGKTVFAQFKTFTNYHHKELSEILTEL SSKNKNTIQEKAIIKTVNSCMKAL" misc_feature complement(583120..583446) /locus_tag="lmo0545" /note="Glucitol operon activator protein (GutM); Region: GutM; pfam06923" /db_xref="CDD:429193" regulatory complement(583461..583466) /regulatory_class="ribosome_binding_site" gene complement(583507..584757) /locus_tag="lmo0546" /db_xref="GeneID:985462" CDS complement(583507..584757) /locus_tag="lmo0546" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="NAD(P)-dependent oxidoreductase" /protein_id="NP_464074.1" /db_xref="GeneID:985462" /translation="MTLYRQLLARENENNPIRVGVIGAGQMGFGMISQIAAIPGMSVV GISDIHVEAAQKAADAYNATATKKEKILLSNDFKEIIHSDLVEVIVDATGVPEVGAKI SLETLLAKKQLVLLNVEIDITIGPLMKKLYDSAGLVYTGSDGDEPAAITELYEFSKSM GMEVLVAGKGKNNKLKISANPDSCQVEADGKNMASHMLAAFQDGTKTMAEMNLLSNAI GYVPDVVGMHGISGDVDSVIKDLDLKDQGGILNKFGVVEYVDGLAPGVFVIVKGQNEG VSHELSYLMKKGDRDHHILYRPYHLASLETPLTIAKAVLNHDHAIVPMGAPVSETVAV AKKDIAAGEKLDGIGGFCVRGVLETHVDMATNGHIPIGLISGEVVARRNIKAGTFITD EDVSLDESTTVWKLRKLQDETFSK" misc_feature complement(583513..584754) /locus_tag="lmo0546" /note="Predicted homoserine dehydrogenase, contains C-terminal SAF domain [Amino acid transport and metabolism]; Region: COG4091" /db_xref="CDD:443267" regulatory complement(584766..584771) /regulatory_class="ribosome_binding_site" regulatory complement(584943..584977) /regulatory_class="terminator" gene complement(585015..585962) /locus_tag="lmo0547" /db_xref="GeneID:984998" CDS complement(585015..585962) /locus_tag="lmo0547" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DeoR family transcriptional regulator" /protein_id="NP_464075.1" /db_xref="GeneID:984998" /translation="MKWEEKRDMVKIATWYYHYGWTQAQIAKKIGISRSIISKTLQRA KDLGIVEIFIKDETYYTVDLEQKLEEKFGLEEAIVVATHDMSEEEALNFLAKEAAYTL SKRIAKVKTLGISWGKTIRKFANEFPFIPHKDLTIIPLIGGMGSSDIDLHSNQICYDL KKKMKCHSKYLYAPALVEDTEMKTDLSKNKYISEVLEEGKTVDMAIVGVSSPYNHSTM EEIGYINSEDIEELRYKDVVGDINSRFFTADGKEAKTEINTHVIGLSLEELKNIPTVV ALANGLQKKEALVAALNAGLIDVIVITDRMAEYILQKND" misc_feature complement(585027..585932) /locus_tag="lmo0547" /note="DNA-binding transcriptional regulator LsrR, DeoR family [Transcription]; Region: DeoR; COG2390" /db_xref="CDD:441955" regulatory complement(585971..585976) /regulatory_class="ribosome_binding_site" regulatory 586315..586320 /regulatory_class="ribosome_binding_site" gene 586329..586994 /locus_tag="lmo0548" /db_xref="GeneID:986247" CDS 586329..586994 /locus_tag="lmo0548" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0548" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464076.1" /db_xref="GeneID:986247" /translation="MEKLFTYKEFVDMMQKYGIRHTKRKLRRGENLMENASKFSNVVL LINGYISSYTYESPEKLLSIFEPGIFLRYSILEDQPEFVTNIALSDNCEVYEYKKEDI EYALTLFPENFGFQYFFLKRIGRHLYYRALLNGKEHKEKLYYAMKYLGELIGKTDENG NVSLPPEVTLKVLIEYSTLSKAAFYRQRIRLLEQEILKPHENTFIVQKKVASHYENQL TSI" regulatory 586996..587001 /regulatory_class="ribosome_binding_site" gene 587012..589033 /locus_tag="lmo0549" /db_xref="GeneID:984412" CDS 587012..589033 /locus_tag="lmo0549" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_464077.1" /db_xref="GeneID:984412" /translation="MKFNWKVVLLFVLILAFIVPVYSKAVETGKEVPKSPELLDDKSS TLKNVNTPKNLKASPLTIPANSTIADLFPDEGMAKTIANQLGRTENNNFQTPTKTDWK VDDVVTEVELNRMWYLTSVATIGSIEGIQYLPNLYDVRLQFDKQCKDLSPFLKAPNGY SQLYRLNINNGNISDISPLTELSAPTLNDIDLGGNNISDLSLFPKLPNKFPNLEEISL ERNNISDVSPLAKFASTKIKIFNLDENHITDLSSLTNNKMPNLQRLYVRYQTLDMEPV VTSSKYEFSIQPSIFGTTKPVKITATKPKATIDPITSKITYSAEEMAKKPFYYTPLFP GVTYSWDENFPLNGSNSLVDFRGTITQPLTYIEPPQVVSYNSGLTYEIGTSLTEQQFL NDVNLITDQPTTITSDFDVKLKNLNTVGIYWVAVKASNIEGNAEANIMVTIKYKPPVI TADAEYTYLVGDKVNATQFRADVNATLTGEGTLRDDFIYKVRLNTAGDYVVTLTSPKS GYYEQDAIPVTVIVHVKELLELQIPDEFRMDIDANADSVPISDKKQTLKCYGSSGKAE LEVIDRRTVRQGWTITGAMTPFTNSGGDVLQTSLKYQSKAPSSSPIYLNTTNQPIEKK QSAVTDPKYDSTVFNLEDSLSMEIEPNDALVNDSYESKITWTLEDAPRP" misc_feature 587123..>587815 /locus_tag="lmo0549" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 587498..587569 /locus_tag="lmo0549" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 587570..587647 /locus_tag="lmo0549" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 587648..587719 /locus_tag="lmo0549" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 587720..587791 /locus_tag="lmo0549" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 588122..588340 /locus_tag="lmo0549" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature 588353..588583 /locus_tag="lmo0549" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature <588710..589018 /locus_tag="lmo0549" /note="WxL domain surface cell wall-binding; Region: WxL; pfam13731" /db_xref="CDD:433439" gene 589066..589362 /locus_tag="lmo0550" /db_xref="GeneID:985431" CDS 589066..589362 /locus_tag="lmo0550" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="pepdidoglycan-bound protein" /protein_id="NP_464078.1" /db_xref="GeneID:985431" /translation="MKKMGFILICCLFVCASPFYVKANTDKATSKAGVIFTHDPRKPK TGTDDRSGTFPTKVPPKRLPKTGDTADFYLVLLGVGFILIAKKGYFKEVREEIR" regulatory 589394..589399 /regulatory_class="ribosome_binding_site" gene 589406..590248 /locus_tag="lmo0551" /db_xref="GeneID:984417" CDS 589406..590248 /locus_tag="lmo0551" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0551" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464079.1" /db_xref="GeneID:984417" /translation="MTSRTVKVTTASLLALGLIVAPVLSGDFASAATSVTKDSKGIVK FDKSTTPDPDPVNPDPVDPDPVIPDPTDPPLGTDGLWILAVSDWDFGTHNVSSLSSGA LNVHAADDTISTYVDANGNGQQDLPGEVSVTKKVTPYAQISDVRGTNTGWTLSVTGSA FKDSSTPAKTIPGAELTIPKSTVSSATSTAQAPTGYDSVTISMTGGAAVPVMAAKDMQ TATPTNFNDDQGMGTWTDSFGSQAVSATDTSKPKLSIPKNVVVADGTYQSTLTWTLSD TPAV" misc_feature 589631..590233 /locus_tag="lmo0551" /note="WxL domain surface cell wall-binding; Region: WxL; pfam13731" /db_xref="CDD:433439" regulatory 590308..590313 /regulatory_class="ribosome_binding_site" gene 590324..591355 /locus_tag="lmo0552" /db_xref="GeneID:986885" CDS 590324..591355 /locus_tag="lmo0552" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464080.1" /db_xref="GeneID:986885" /translation="MKKICAIIFACILAILCFPGQQAYATENSSFSVKAILPDNQASS VTYFDLQMNPKQKQTLKVEITNHSKEEITVNCVANTAVTNEMGYVDYSIPNTKPDKTL KYPFADIVKESVSEVTLKPNETKIWTAAIQMPAENYDGIILGGLHFQEKKEEDKEKES SENDVQIKNEYAYVIGVKLTEKTTVVKPELELNQIKPATRNYRNVVEMNLQNTKATLV GGLAVDAKIYKKGSEKVLHESKRTDLSMAPNSNFNYSVDWENQELKPGKYKVHLVAKN KEDKWEWTKEFTISSDQAKKANKAALGLEKDYTWMYIVGGVLLFILLIITTYFVGKRA AKKKQENEK" misc_feature 590417..590770 /locus_tag="lmo0552" /note="Bacterial protein of unknown function (DUF916); Region: DUF916; pfam06030" /db_xref="CDD:461805" misc_feature 590810..591220 /locus_tag="lmo0552" /note="Protein of unknown function C-terminal (DUF3324); Region: DUF3324; pfam11797" /db_xref="CDD:463353" regulatory complement(591358..591405) /regulatory_class="terminator" gene complement(591412..592047) /locus_tag="lmo0553" /db_xref="GeneID:984712" CDS complement(591412..592047) /locus_tag="lmo0553" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0553" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464081.1" /db_xref="GeneID:984712" /translation="MLIKNLCIPKINLTTVPGDATLQEAIHLLEESGYRCVPVLDEKG EKFLGNIYKMHIYKHAANGGSLSDPVMSLIKNATKHICVNASFFEVFFTIKELPYIAV LNEQGNFYGILTHGKLLGLLQDGWNVKTTSYVLTIATGEVQGALTKITKIIDRYSSIS SLITLDNQTEDFIRRVLVSLPVGVTEEKKNEIVSHLERKGLRVVETEKIEK" misc_feature complement(591421..592047) /locus_tag="lmo0553" /note="cyclic di-AMP binding protein CbpA; Region: CBS_CbpA; NF038387" /db_xref="CDD:439679" regulatory complement(592055..592060) /regulatory_class="ribosome_binding_site" regulatory 592243..592248 /regulatory_class="ribosome_binding_site" gene 592257..593438 /locus_tag="lmo0554" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984446" CDS 592257..593438 /locus_tag="lmo0554" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="NADH-dependent butanol dehydrogenase" /protein_id="NP_464082.1" /db_xref="GeneID:984446" /translation="MQKEMLNFDYYNPTHIIFGKNRFNELNEVIPQDKKVLILYGGGS VERFGTLDKVKAALKSREVGEFGGIEANPTYETLIKAIQLVKEENYDFLLAVGGGSVI DGTKFVAAGALFDGEPMDIFGSGIGEKRPITKALPFGTVLTLPATGSEMNSGGVITFV EKKAKLGFGSAYTYPVFSLLDPELTYTLPKRQLANGIMDAYVHVMEQYMTYPVGALLQ DRYAESLLQTLIEIGPDVIKEDNHDYNTRATFMWSATNALNGTLSRGVPQDWASHSLG HEITALYGIDHARTLAIVLPSLLNVRRSEKHDKLVQYAERVWGITSGSDEEKIDAAIL KTREFFESLGAGTRFSDYGLGEEVVDLLVDQLDRHGLTNISERGDQTLEVSRQIYTNA L" misc_feature 592269..593435 /locus_tag="lmo0554" /note="Alcohol dehydrogenase YqhD, Fe-dependent ADH family [Energy production and conversion]; Region: YqdH; COG1979" /db_xref="CDD:441582" regulatory 593513..593518 /regulatory_class="ribosome_binding_site" gene 593528..595006 /locus_tag="lmo0555" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984577" CDS 593528..595006 /locus_tag="lmo0555" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="di-tripeptide transporter" /protein_id="NP_464083.1" /db_xref="GeneID:984577" /translation="MSTNKEKTFFGHPRGLATLFNTEFWERFSYYGMRALLLYYMYTA VADGGLGFSQSTATAIMSIYGSLVFMSGVIGGWFADRVLGARKTIFYGGVLIMVGHIV LALPNGGAAALFGSMAFIILGTGLLKPNVSNVVGDLYPAGDNRRDAGFSIFYMGINLG AFIAPPIVSAVSDNAGSYHAGFGVAAVGMAIALVVYVLTGKRYLKDAGKKAPNPLQRS EAKSLTFKIIGIVLGIGLLIAVLTLITGSLTIDTIILAVTVMGVGVPLAYFIMMMTSK KTEADEKSRLTAYIPLFLIAVLFWMIEEQGSSTLALFAAERTDLSIWGMNLNPANFQS LNPVFVITLSPIFAWIWTKLGDRQPSTPRKFALGLFFAGLSFVVMMLPGILHGNTTTL VSPLWLVLSFFICIFGEMFISPVGLSATTKLAPKAFASQTMSLWFLSDAMGQSFNAQL TQLFNADTEIAYFGITGFVAIAFAIALFIFAPFLKKYMKGVH" misc_feature 593531..595003 /locus_tag="lmo0555" /note="Dipeptide/tripeptide permease [Amino acid transport and metabolism]; Region: PTR2; COG3104" /db_xref="CDD:442338" regulatory 595019..595055 /regulatory_class="terminator" regulatory 595123..595128 /regulatory_class="ribosome_binding_site" gene 595135..595842 /locus_tag="lmo0556" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984853" CDS 595135..595842 /locus_tag="lmo0556" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoglycerate mutase" /protein_id="NP_464084.1" /db_xref="GeneID:984853" /translation="MESSSRVVIYLTRHGKTILNTLDRVQGWADSPLTEEGALVAHDL GRGLKGTNFVAAYASDRGRAIETARIVMKESDNHHLKLEKLAEMREFGFGKFEGEYNQ AVLKMVAKAHGFESIESYYDKTSENNSNIVIDTVHKMDETGMTENSAIFEERLTAGLD TILADANKRGGGDVLVVAHGMVIHRIIEMIDPSKNLRIIENASVTKVIFEDGAYSIEE PGNMLYVEAGKKAQGGV" misc_feature 595159..595785 /locus_tag="lmo0556" /note="Broad specificity phosphatase PhoE [Carbohydrate transport and metabolism]; Region: PhoE; COG0406" /db_xref="CDD:440175" regulatory 595830..595835 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0556" gene 595843..596538 /locus_tag="lmo0557" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984617" CDS 595843..596538 /locus_tag="lmo0557" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoglycerate mutase" /protein_id="NP_464085.1" /db_xref="GeneID:984617" /translation="MATGKLNVYLVRHGKTMFNTSRRVQGWSDTPLTNEGIEVAEFLG RGLREIPFDAVYTSDRGRTIETAGIVLRESNQAHLEINELRDFREFGFGKFEGEYEDI MFGRVMEHLGFRSMEEAFEKFGDDGYQIISETVEKIDETGMSENWDEMVARLKNALGT VSAENEVENANVLVVSHGMAINTIISFFDKSLINPDLANASVTRLGFENGEWTIEMVN DLSYIEAGKLVLV" misc_feature 595864..596496 /locus_tag="lmo0557" /note="Broad specificity phosphatase PhoE [Carbohydrate transport and metabolism]; Region: PhoE; COG0406" /db_xref="CDD:440175" regulatory complement(596532..596570) /regulatory_class="terminator" regulatory 596543..596581 /regulatory_class="terminator" gene complement(596580..597620) /locus_tag="lmo0558" /db_xref="GeneID:984498" CDS complement(596580..597620) /locus_tag="lmo0558" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464086.1" /db_xref="GeneID:984498" /translation="MSKNQATAYIGTYTKAESQGIYRLVIDKTTGEIKENKLAGKMDN PTYLKISDDEKFVYSVAKDGDKGGVAAFSVEEDGSLTFIGQDVQTGNPPCYVDASHDG SIVVSANYHLGTIVSYPTENGALKPSVSTIQHTGKSVHERQEKPHAHFAGFTPEQKYV ITCDLGTDKVTTYSANAGKLEKVTELDVKPGSGPRNLVFHPNAKYVYIMTELTSEVIF AEYDEATGALKVIQTIASLPEGFDKENKGSAIHISPDGRFLYVSNRGQDAIVSYAVAE NGTLTHAATTPVEGVGPRDFDLNYTGEILVATNENSNNVTVFGVNKETGALTLLQKDV KVPEPVCIKFVK" misc_feature complement(596601..597602) /locus_tag="lmo0558" /note="7-bladed beta-propeller; Region: Lactonase; pfam10282" /db_xref="CDD:431196" regulatory complement(597628..597633) /regulatory_class="ribosome_binding_site" gene 597812..597926 /locus_tag="lmos23" /db_xref="GeneID:18245128" misc_RNA 597812..597926 /locus_tag="lmos23" /product="rli31" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245128" regulatory 598005..598010 /regulatory_class="ribosome_binding_site" gene 598020..598925 /locus_tag="lmo0559" /db_xref="GeneID:985234" CDS 598020..598925 /locus_tag="lmo0559" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464087.1" /db_xref="GeneID:985234" /translation="MSIQTIFGNGQYNWINIDTDNTDKLADFYEEYHIDDEVIAYSID RNERAHFEYDQKTNTFVIVFNVPDQRKIDNHYETIPMVFIIKDKQLITITNNDNQYIT RKMKRYLKESDEVTIFQFLFSSLYFIMDAFFPYVEEMDTDRRTINDKLKIKTTKKNLL SLSDLETGIVYFVSASKQNAALLEQMKAHMIYRELNEVEKEQFEDALIEARQLVEMTG LSSQILQQLSGTYNNILNNNLNDTMKILTALSILLTVPTIITGFFGMNMPLPLEHNTF GWIVTIFISVILWFGLSFILRKLMR" misc_feature 598059..598913 /locus_tag="lmo0559" /note="uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family; Region: EcCorA_ZntB-like_u2; cd12827" /db_xref="CDD:213361" misc_feature order(598065..598067,598164..598166,598206..598208, 598212..598214,598257..598259,598299..598310, 598314..598319,598401..598403,598410..598412, 598557..598562,598569..598571,598638..598640) /locus_tag="lmo0559" /note="Cl binding site [ion binding]; other site" /db_xref="CDD:213361" misc_feature order(598128..598130,598137..598142,598167..598169, 598173..598175,598326..598328,598338..598340, 598374..598376,598383..598385,598395..598397, 598407..598409,598416..598421,598428..598430, 598437..598442,598446..598451,598458..598460, 598494..598499,598503..598508,598515..598520, 598527..598532,598536..598541,598551..598553, 598557..598562,598569..598574,598581..598586, 598620..598625,598629..598634,598641..598646, 598650..598655,598662..598667,598671..598676, 598680..598688,598695..598718,598722..598760, 598764..598772,598776..598793,598797..598820, 598851..598856,598863..598868,598905..598907) /locus_tag="lmo0559" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:213361" regulatory complement(598922..598959) /regulatory_class="terminator" regulatory 598933..598970 /regulatory_class="terminator" gene complement(598968..600344) /locus_tag="lmo0560" /db_xref="GeneID:986813" CDS complement(598968..600344) /locus_tag="lmo0560" /EC_number="1.4.1.4" /experiment="EXISTENCE:[PMID:19448609]" /note="converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer" /codon_start=1 /transl_table=11 /product="glutamate dehydrogenase" /protein_id="NP_464088.1" /db_xref="GeneID:986813" /translation="MAQTSTIQNDTKAAEEYAARVFETIKQRNPGETEFHQAVEEFLN SVIPALAKEPKYEANGILEQLTEPERLISFRVPWVDDSGTVHVNRGYRVQFNSAIGPY KGGLRFHPSVTGSIVKFLGFEQIFKNSLTGLPIGGGKGGSDFDPKGKSDSEVMRFCQS FMTELQKHIGPDTDVPAGDIGVGGREIGYLFGQYKRLRGAYDAGTITGKGLSYGGSLA RTEATGYGLVYFTVEMLEAAGETIRGKKIVVSGSGNVAIYAIEKAHELGAKVVACSDS AGFVYDKEGIKVETVKQLKEVERKRISEYTTIHPSAEYYAGGDVWSVPCDIALPCATQ NEINADQARALVKNGVIAVAEGANMPSTLDAVDIYHENKVLFGPAKAANAGGVAVSAL EMAQNSTRMSWTFQTVDEHLQNIMKDIYKNSSNAASEYGAPGNLVIGANIAGFLKVAD TMISQGII" misc_feature complement(598971..600305) /locus_tag="lmo0560" /note="NADP-specific glutamate dehydrogenase; Region: PRK09414" /db_xref="CDD:181834" regulatory complement(600354..600359) /regulatory_class="ribosome_binding_site" gene 600604..600750 /locus_tag="lmos24" /db_xref="GeneID:18245129" misc_RNA 600604..600750 /locus_tag="lmos24" /product="rli32" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245129" gene complement(600837..601148) /gene="hisE" /locus_tag="lmo0561" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984508" CDS complement(600837..601148) /gene="hisE" /locus_tag="lmo0561" /EC_number="3.6.1.31" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis" /codon_start=1 /transl_table=11 /product="phosphoribosyl-ATP pyrophosphatase" /protein_id="NP_464089.1" /db_xref="GeneID:984508" /translation="MLNDLYEEIKLRKTQPREGSYTNYLFDKGLDKILKKVGEEATEV VIAAKNDNQELIAEVSDLAYHLLVLLAEKNIPLVAIQTELQKREGKLSTTRDRKEIND L" misc_feature complement(600849..601148) /gene="hisE" /locus_tag="lmo0561" /note="phosphoribosyl-ATP diphosphatase; Region: hisE; PRK00400" /db_xref="CDD:179005" gene complement(601149..601466) /gene="hisI" /locus_tag="lmo0562" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984519" CDS complement(601149..601466) /gene="hisI" /locus_tag="lmo0562" /experiment="EXISTENCE:[PMID:19448609]" /note="PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers" /codon_start=1 /transl_table=11 /product="phosphoribosyl-AMP cyclohydrolase" /protein_id="NP_464090.1" /db_xref="GeneID:984519" /translation="MISVDFSKGLVPTIILDDQNGDVLMLAYMNEESYQKTLETGYTW FFSRSRNELWNKGATSGHTQKVKQIWTDCDNDTLLIRVTQIGPACHTGKKSCFFNLIK EDF" misc_feature complement(601170..601466) /gene="hisI" /locus_tag="lmo0562" /note="Phosphoribosyl-AMP cyclohydrolase [Amino acid transport and metabolism]; Region: HisI1; COG0139" /db_xref="CDD:439909" regulatory complement(601157..601162) /regulatory_class="ribosome_binding_site" /gene="hisI" /locus_tag="lmo0562" gene complement(601463..602218) /gene="hisF" /locus_tag="lmo0563" /db_xref="GeneID:984515" CDS complement(601463..602218) /gene="hisF" /locus_tag="lmo0563" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase" /codon_start=1 /transl_table=11 /product="imidazole glycerol phosphate synthase subunit HisF" /protein_id="NP_464091.1" /db_xref="GeneID:984515" /translation="MLTKRIIPCLDVTAGRVVKGVNFVSLTDVGDPVEIAKAYNEAGA DELVFLDITATVELRQTMIDVVERTAEQVFIPLTVGGGISSVSDMKELLQAGADKISL NSAAIKRPELIQEGAAKFGNQCIVVAIDAKWNGTNWSVFTRGGRNDTGLDAIEWAKKA VQLGAGEILLTSMDGDGTKNGYDIPLTKAISEAVSVPVIASGGCGNAAHMVEVFEKTK ATAALAASIFHYGELSIKNVKTTLLEKGVNIRP" misc_feature complement(601466..602215) /gene="hisF" /locus_tag="lmo0563" /note="Imidazole glycerol phosphate synthase subunit HisF [Amino acid transport and metabolism]; Region: HisF; COG0107" /db_xref="CDD:439877" regulatory complement(601479..601484) /regulatory_class="ribosome_binding_site" /gene="hisF" /locus_tag="lmo0563" gene complement(602208..602930) /gene="hisA" /locus_tag="lmo0564" /db_xref="GeneID:984608" CDS complement(602208..602930) /gene="hisA" /locus_tag="lmo0564" /EC_number="5.3.1.16" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide" /codon_start=1 /transl_table=11 /product="1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase" /protein_id="NP_464092.1" /db_xref="GeneID:984608" /translation="MQIFPAIDLKNGQCVRLFQGDFSKKTVVNEDPIAQAKAFATDGA TYLHIVDLDGALEGRPINLEVIQKMKITAKIPVQVGGGIRSMAQVDYYLESGIDRVII GSAALTDPDFLRAAVQKYGAKIAAGIDAKNGFVATRGWLDVSQVSYLDLAKRMEKVGV ETIIYTDISRDGTLTGPNLEQMANLKEHVKVNLIASGGVSSRADLEALAQLGLYGAIA GKALYNHHISMSDIVEVEQIAY" misc_feature complement(602238..602930) /gene="hisA" /locus_tag="lmo0564" /note="1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated; Region: PRK00748" /db_xref="CDD:179108" misc_feature complement(order(602544..602546,602787..602789, 602907..602909)) /gene="hisA" /locus_tag="lmo0564" /note="catalytic residues [active]" /db_xref="CDD:240083" regulatory complement(602228..602233) /regulatory_class="ribosome_binding_site" /gene="hisA" /locus_tag="lmo0564" gene complement(602909..603535) /gene="hisH" /locus_tag="lmo0565" /db_xref="GeneID:984852" CDS complement(602909..603535) /gene="hisH" /locus_tag="lmo0565" /experiment="EXISTENCE:[PMID:19448609]" /note="with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide" /codon_start=1 /transl_table=11 /product="imidazole glycerol phosphate synthase subunit HisH" /protein_id="NP_464093.1" /db_xref="GeneID:984852" /translation="MIVIIDYDTGNTKSISKALDFIGLQNKISSDATEISQADGVILP GVGAYPEAMKELTRRGLNKTLKEIAAGGKPILGVCLGMQLLLESSNEHSFTNGLGLIP GHVEKLPEDPEFAVPHMGWNQLQIKRATPLTKQLDGEYVYYVHSYYANCPEEYIIATS GYSIEVPGMINKGNIYGAQFHPEKSGQIGLEILKGFKEVTYSCKSSQQ" misc_feature complement(602927..603535) /gene="hisH" /locus_tag="lmo0565" /note="imidazole glycerol phosphate synthase subunit HisH; Provisional; Region: hisH; PRK13141" /db_xref="CDD:237288" misc_feature complement(order(602987..602989,602993..602995, 603293..603307,603395..603418)) /gene="hisH" /locus_tag="lmo0565" /note="putative active site [active]" /db_xref="CDD:153219" misc_feature complement(603395..603418) /gene="hisH" /locus_tag="lmo0565" /note="oxyanion strand [active]" /db_xref="CDD:153219" misc_feature complement(order(602987..602989,602993..602995, 603299..603301)) /gene="hisH" /locus_tag="lmo0565" /note="catalytic triad [active]" /db_xref="CDD:153219" regulatory complement(602941..602946) /regulatory_class="ribosome_binding_site" /gene="hisH" /locus_tag="lmo0565" gene complement(603536..604120) /gene="hisB" /locus_tag="lmo0566" /db_xref="GeneID:985436" CDS complement(603536..604120) /gene="hisB" /locus_tag="lmo0566" /EC_number="4.2.1.19" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis" /codon_start=1 /transl_table=11 /product="imidazoleglycerol-phosphate dehydratase" /protein_id="NP_464094.1" /db_xref="GeneID:985436" /translation="MRTATKTRVTAETSIELSINLDSQVESTISTGVGFLDHMLTLFA KHSRVTLNVKADGDTYVDAHHTVEDIGITLGLCLKEALADKASINRYGSAYVPMDESL GFCALDLSGRSYLVFDAELTNPKLGDFDTELVEEFFQAVAFNTEMNLHLRVLYGKNTH HKIEALFKAFGRALREAITINPEIKGVNSTKGVL" misc_feature complement(603539..604120) /gene="hisB" /locus_tag="lmo0566" /note="imidazoleglycerol-phosphate dehydratase HisB; Region: hisB; PRK00951" /db_xref="CDD:234873" misc_feature complement(order(603629..603631,603638..603643, 603713..603715,603785..603787,603824..603829, 603851..603853,603917..603919,603926..603931, 603983..603988,603995..603997,604007..604009, 604085..604087)) /gene="hisB" /locus_tag="lmo0566" /note="putative active site pocket [active]" /db_xref="CDD:153419" misc_feature complement(order(603638..603652,603713..603718, 603725..603727,603731..603733,603740..603754, 603926..603931,603935..603943,604007..604009, 604016..604021)) /gene="hisB" /locus_tag="lmo0566" /note="4-fold oligomerization interface [polypeptide binding]; other site" /db_xref="CDD:153419" misc_feature complement(order(603629..603631,603638..603643, 603713..603715,603917..603919,603926..603931, 604007..604009)) /gene="hisB" /locus_tag="lmo0566" /note="metal binding residues [ion binding]; metal-binding site" /db_xref="CDD:153419" misc_feature complement(order(603578..603580,603596..603598, 603605..603607,603659..603661,603665..603667, 603671..603673,603677..603679,603779..603781, 603785..603787,603797..603805,603815..603820, 603824..603832,603836..603844,603848..603850, 603854..603856)) /gene="hisB" /locus_tag="lmo0566" /note="3-fold/trimer interface [polypeptide binding]; other site" /db_xref="CDD:153419" regulatory complement(603544..603549) /regulatory_class="ribosome_binding_site" /gene="hisB" /locus_tag="lmo0566" gene complement(604121..605404) /gene="hisD" /locus_tag="lmo0567" /db_xref="GeneID:985596" CDS complement(604121..605404) /gene="hisD" /locus_tag="lmo0567" /EC_number="1.1.1.23" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer" /codon_start=1 /transl_table=11 /product="histidinol dehydrogenase" /protein_id="NP_464095.1" /db_xref="GeneID:985596" /translation="MKILTGTINELLNEVKAENNTNNSLQVESEVKSIIEKVKKDGDQ ALFDFTSQFDGVRLTELRVQTADIQSASSKVDPAFLVALQQAKANIESFHSKQKQHAF LDSEKDGVIRGQLIRPLETVGIYVPGGTAAYPSSVLMNVLPAKIAGVKRIVMITPPAE NGINPHVLAAAQLAGVDEIYQVGGAHGIAALAHGTESIPKVDKIVGPGNIYVATAKRE VFGLVDIDMIAGPSEIVVLADENANPAFIASDLLSQAEHDILARAILITTSKKIAEET QNEINKQLENLPRKAIAQKSIETQGKIIIAANTQEMFDIMNEIAPEHLEVQLENPMNY LNQIKNAGSIFLGSYASEPLGDYFAGPNHVLPTSGTAKFFSPLGVEDFTKRSAFISYT KEALAKEKDAIVLLAKKEGLDAHAKAIQIRFEEEN" misc_feature complement(604136..605404) /gene="hisD" /locus_tag="lmo0567" /note="bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed; Region: hisD; PRK00877" /db_xref="CDD:234853" misc_feature complement(order(604634..604636,604769..604774, 604778..604786,604847..604849,604853..604858, 604934..604936,604997..604999,605021..605026, 605030..605032,605246..605248)) /gene="hisD" /locus_tag="lmo0567" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:119329" misc_feature complement(order(604160..604180,604184..604189, 604232..604255,604262..604267,604271..604285, 604289..604294,604322..604324,604328..604330, 604334..604348,604352..604357,604361..604363, 604367..604393,604397..604402,604409..604411, 604424..604426,604634..604639,604643..604651, 604655..604660,604667..604672,604742..604744, 604754..604756,604799..604801,605000..605014, 605048..605050,605054..605056,605063..605077, 605087..605089,605093..605095,605114..605119, 605126..605131,605138..605143,605150..605152, 605156..605161,605168..605173)) /gene="hisD" /locus_tag="lmo0567" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:119329" misc_feature complement(order(604160..604162,604169..604171, 604175..604177,604316..604318,604334..604339, 604349..604351,604436..604441,604634..604636, 604709..604711,605000..605002,605006..605008)) /gene="hisD" /locus_tag="lmo0567" /note="product binding site [active]" /db_xref="CDD:119329" misc_feature complement(order(604160..604162,604169..604171, 604175..604177,604316..604318,604334..604339, 604349..604351,604436..604441,604634..604636, 604643..604645,604709..604711,605000..605002)) /gene="hisD" /locus_tag="lmo0567" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119329" misc_feature complement(order(604160..604162,604337..604339, 604634..604636,604643..604645)) /gene="hisD" /locus_tag="lmo0567" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:119329" misc_feature complement(604436..604441) /gene="hisD" /locus_tag="lmo0567" /note="catalytic residues [active]" /db_xref="CDD:119329" regulatory complement(604129..604134) /regulatory_class="ribosome_binding_site" /gene="hisD" /locus_tag="lmo0567" gene complement(605401..606042) /gene="hisG" /locus_tag="lmo0568" /db_xref="GeneID:985390" CDS complement(605401..606042) /gene="hisG" /locus_tag="lmo0568" /EC_number="2.4.2.17" /experiment="EXISTENCE:[PMID:19448609]" /note="short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ" /codon_start=1 /transl_table=11 /product="ATP phosphoribosyltransferase" /protein_id="NP_464096.1" /db_xref="GeneID:985390" /translation="MKALKIALTKGRLEKDAVALLEKAGIDCSSMTDKKRKLIFHSST QPISFILVKAVDVMTYVKHGVADIGIVGKDVLMEASKSHYEMLDLEIGKCQFCLASTP DFDPSSYRRKIIATKYPTVASKFFREKGEDVEIIKIEGSVEIAPVLDLADAIIDIVET GSTLKENGLIIYEKMYPISARLIVNKASLKQNKTQIFHLIDQLEQAIKEELAE" misc_feature complement(605425..606033) /gene="hisG" /locus_tag="lmo0568" /note="The catalytic domain of hetero-octomeric short form HisGs; contains the type 2 periplasmic binding protein fold; Region: PBP2_HisGs; cd13595" /db_xref="CDD:270313" misc_feature complement(order(605443..605445,605452..605454, 605464..605466,605488..605490,605593..605595, 605599..605604,605611..605613,605620..605637, 605647..605649,605683..605685,605779..605796, 605854..605859,605863..605865,605875..605877, 605890..605895,605926..605931,606013..606015)) /gene="hisG" /locus_tag="lmo0568" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:270313" misc_feature complement(order(605554..605565,605569..605577, 605614..605616,605620..605622)) /gene="hisG" /locus_tag="lmo0568" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270313" regulatory complement(605415..605420) /regulatory_class="ribosome_binding_site" /gene="hisG" /locus_tag="lmo0568" gene complement(606039..607220) /gene="hisZ" /locus_tag="lmo0569" /db_xref="GeneID:984506" CDS complement(606039..607220) /gene="hisZ" /locus_tag="lmo0569" /experiment="EXISTENCE:[PMID:19448609]" /note="May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine" /codon_start=1 /transl_table=11 /product="ATP phosphoribosyltransferase" /protein_id="NP_464097.1" /db_xref="GeneID:984506" /translation="MNLNKNLPTGTRDKLFREARAAYKIEQQVNHYFEKRGFKRIETP VIEFEDVFSSEHQADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVMLPLKLSYSG KIFRANEDFGGEQNEQTQAGIEIIGYPSIKAEIECILIGIGVLNALEIPNFQIELGHA AIYRRVTNLLNLSETAEIDFRLLIQNKSLTGIKRFVADNPSTLDDFILALPRLFGPAT AILKQAKNLTTDKGILTALREMETIVEAVSYTADISVDLGLVQDFHYYTGIIFRGYAD LAADNFLSGGRYDHLLEQFTSASSPAVGLALNLDSLTTLQNRAGVIKKQVSTSLLIHY DLDAIQQAEKLMQETPNSELSFFETPTNAISFAKKWHIPAVIHVSRQGIQTIFQREAD L" misc_feature complement(606051..607214) /gene="hisZ" /locus_tag="lmo0569" /note="ATP phosphoribosyltransferase regulatory subunit; Provisional; Region: hisZ; PRK12292" /db_xref="CDD:237043" regulatory complement(606050..606055) /regulatory_class="ribosome_binding_site" /gene="hisZ" /locus_tag="lmo0569" regulatory complement(607228..607233) /regulatory_class="ribosome_binding_site" regulatory 607359..607364 /regulatory_class="ribosome_binding_site" gene 607372..608199 /gene="hisJ" /locus_tag="lmo0570" /db_xref="GeneID:984572" CDS 607372..608199 /gene="hisJ" /locus_tag="lmo0570" /EC_number="3.1.3.15" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of L-histidinol from L-histidinol phosphate" /codon_start=1 /transl_table=11 /product="histidinol-phosphatase" /protein_id="NP_464098.1" /db_xref="GeneID:984572" /translation="MKRDGHTHTEFCPHGTHDDVEEMILKAIELDFDEYSIVEHAPLS REFMNNTAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDYLIGYED FTRDFLDEYGPQTDDGVLSLHFLEGQGGFRSIDFSAEDYNEGIVQFYGGFEQAQLTYL EGVKQSIEADLGLFKPRRIGHISLCQKFQQFFGADTSNFSGEVMEEFQAILALVKKRD YELDFNTAGLFKSLCGETYPPKEIVTLARELKIPLVYGSDSHGVQDIGRGYNTYCQK" misc_feature 607372..608196 /gene="hisJ" /locus_tag="lmo0570" /note="histidinol-phosphatase HisJ; Region: PRK08123" /db_xref="CDD:236155" misc_feature order(607387..607389,607393..607395,607411..607413, 607489..607491,607648..607650,607738..607740, 607912..607914,608143..608145,608149..608151) /gene="hisJ" /locus_tag="lmo0570" /note="active site" /db_xref="CDD:213994" misc_feature order(607396..607404,607408..607419,607426..607431, 607576..607581,607588..607593,607597..607605, 607609..607611) /gene="hisJ" /locus_tag="lmo0570" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:213994" gene complement(608184..608480) /locus_tag="lmo0571" /db_xref="GeneID:985060" CDS complement(608184..608480) /locus_tag="lmo0571" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="methyltransferase" /protein_id="NP_464099.1" /db_xref="GeneID:985060" /translation="MVPADFEERVYTVVRQIPRGKVTTYGQIAYMIGFPKNARLVGAT LKHSKRDQITPCHRVVNAAGRLVPGWEEQRELLLSEGVKFKENGHVKMKDHFWQ" misc_feature complement(608187..608480) /locus_tag="lmo0571" /note="Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain [Transcription]; Region: Atl1; COG3695" /db_xref="CDD:442910" misc_feature complement(order(608277..608279,608298..608300, 608313..608315,608337..608339,608343..608348, 608355..608357,608361..608366,608370..608372, 608379..608381,608403..608408,608460..608465)) /locus_tag="lmo0571" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:119438" misc_feature complement(order(608241..608243,608304..608306, 608310..608315,608406..608408)) /locus_tag="lmo0571" /note="active site" /db_xref="CDD:119438" regulatory complement(608487..608492) /regulatory_class="ribosome_binding_site" regulatory 608543..608548 /regulatory_class="ribosome_binding_site" gene 608557..609588 /locus_tag="lmo0572" /db_xref="GeneID:986053" CDS 608557..609588 /locus_tag="lmo0572" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0572" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464100.1" /db_xref="GeneID:986053" /translation="MPDFSYAKITKLVVHFAGNKAREEGTEVSANVLADIGSEMNQTL ASIFLEPFKKDEYYQFTHETDLDFNEVRTFAANMFVAEEEFLDESKKILEHLYSETTH PNIKSGDVWIFFIEGCVVDGDFTNGIGIFKVENKEVFLKNDFNGREFQIGYDKGITGT DLDKGCLIFNVDHDTGNKVLILDRLNRGDSVYWKDKFLSIDKITDEKFYTEGFVEVCT DYIKQREESLLDKSNFVKATTEYLAGEETLNIAEFARTTIEKPEEITEFNTMVDTFER ENNVRFPETFQLDEEKREKLSKKIRKTIKLGKNISVVVKDLEQLEETDFVQGYDEEKG KNYMIVYYD" misc_feature 608593..609561 /locus_tag="lmo0572" /note="37-kD nucleoid-associated bacterial protein; Region: NA37; pfam04245" /db_xref="CDD:427814" regulatory complement(609587..609618) /regulatory_class="terminator" gene complement(609629..610924) /locus_tag="lmo0573" /db_xref="GeneID:985853" CDS complement(609629..610924) /locus_tag="lmo0573" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464101.1" /db_xref="GeneID:985853" /translation="MDKFFKLRENKTTVRTEILAGLTTFLSMAYVLFVNPSMLATTGM ELKAVFVATILASVVGSLAMGLIANYPIGLAPGMGLNAFFAYTVCAQWGIPWQTALAG VLVSGLVFICLTISGLREKIVNAIPTELKFAVGAGIGFFIAFLGLKNAGIIVPNESTI VALGDLHSGPVLLAVFGIVVTVAYMTIGWKGAIFFGMATTAVAGMLFGLIDVPTQVVS SVPSMESTFGQAIIHLPDIFTPQMLIVILTFFFIDFFDTAGTLVAVATQAGFVKDNKI PRAGRSLFSDSLATVFGAIFGTSTTTSYVESTAGVAVGGRTGLTAVVIAICFSLSLFF SPLLGVITSAVTTPALVIVGILMIGNVAHIDWTKFEVAVPSFFVILMMVLTFSIATGI AIGFIFYPITMVLKGRYKEVHPIMYVMMVLFILYFMFVV" misc_feature complement(609632..610924) /locus_tag="lmo0573" /note="Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 (NCS2) family [Nucleotide transport and metabolism]; Region: NCS2; COG2252" /db_xref="CDD:441853" regulatory complement(610934..610939) /regulatory_class="ribosome_binding_site" gene 611017..611119 /locus_tag="lmos25" /db_xref="GeneID:18245130" misc_RNA 611017..611119 /locus_tag="lmos25" /product="Purine" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245130" regulatory 611227..611232 /regulatory_class="ribosome_binding_site" gene 611240..612634 /locus_tag="lmo0574" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984589" CDS 611240..612634 /locus_tag="lmo0574" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="beta-glucosidase" /protein_id="NP_464102.1" /db_xref="GeneID:984589" /translation="MTYKFPENFWWGSAASGPQTEGAADVDGRKPSIWDHWYKIEPGR FFNDVGPTNTSNFYYQYKEDIALMKQTGHNSFRTSIQWSRLIPDGIGEVNPKAVDFYN RVIDEMLANDVEPFMNLYHFDMPMSMQEKGGFESREVVDAYATFAKTCFELFGDRVKH WFTFNEPIVPVEAGYLYDMHYPNVVDFKRATQVAYHTTLAHALAVKEFHALEIPEGQI GIILNLTPSYPRSQNPADLKAAHIADLIFNRSFLDPVTKGEFPTDLVEIIREHDALPE YTEEDLAIIKNNIIDILGVNYYQPRRVKAKEYAAHPDAPFMPEHLFDNYEMPYRKMNP YRGWEIFERAIYDIAINLRDNYDNIPFFISENGMGVEGESRYRNADGMIEDTYRIDFI KSHLKWLHKAIEEGANCHGYHLWTFMDCWSWANAYKNRYGLVEVDLDNDFKRTVKASG HWYKELAENNGFED" misc_feature 611240..612613 /locus_tag="lmo0574" /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase [Carbohydrate transport and metabolism]; Region: BglB; COG2723" /db_xref="CDD:442035" regulatory 612663..612668 /regulatory_class="ribosome_binding_site" gene 612678..613406 /locus_tag="lmo0575" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986339" CDS 612678..613406 /locus_tag="lmo0575" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="NP_464103.1" /db_xref="GeneID:986339" /translation="MAQNQTKYSFIAEEIRKRIMNHAYPLNQPIPDEITLAKEFDCSR MTMKKALEVLVLEGLLYRKRGHGTFIIKSALDADRLQIHNQEVNGFTKLLNGKKVISK VIEFKVIFPTEEIAERLHIEMETPIYDILRVRLVKDEPYVLEHTYMPVGVIPGINQQI LEGSIYSYIQDDLNLKIASSYKQIRADKATLLDQQYLDCASDDPVVEVEQTVYLNNGL AFEFSRSRHRYDKFVFTTVNIARR" misc_feature 612687..613382 /locus_tag="lmo0575" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: MngR; COG2188" /db_xref="CDD:441791" regulatory 613415..613463 /regulatory_class="terminator" regulatory 613821..613826 /regulatory_class="ribosome_binding_site" gene 613836..615299 /locus_tag="lmo0576" /db_xref="GeneID:985083" CDS 613836..615299 /locus_tag="lmo0576" /experiment="EXISTENCE:[PMID:19448609]" /note="hypothetical cell wall associated protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464104.1" /db_xref="GeneID:985083" /translation="MKKKYFLCVFAVILFFTGFLFGNSPVNAAETDTSNVTYNYIDIS TLTETQKNSIIKGNPNETLTNDYENYSFVYQKNTSEPTTNTDNTSDNNKNQNGTLLKA GDVGPNSYLIILGFILIGSGIGLLTLKKRYARQLLVFLVVLGGSSLLVGSIVQATENS NLKTQESQTVAKGTKETKQPESMEGYTYVGYIHTSKNNTPPVVEKGTVTVNYQDEQGN SLATSETLKGDIGQPYQTATKNIEGYQLKEVNGNTTGTFTEKAQVVTYVYQKVPVATV TVKYLDQDGNKIHDPQTISGNIGEPYDASTDKYKLQIDGYTLDTTKLPNNANGIFTNQ AIEVTYIYTKEAQDVKITIKFVDSNGDPFVLTDLTTYKNGDLVPIYPNLDQYHMRLNY NQQIYNQGEAVPDIVIPAKEGETYLLPERMTFNILDDQGKQIPYVISQNADFSSTGIE RWENYQSIPTNREGTLTSEDVVVTYQILVYGVLIPEP" misc_feature 614460..614642 /locus_tag="lmo0576" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 614664..614864 /locus_tag="lmo0576" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" regulatory complement(615317..615348) /regulatory_class="terminator" regulatory 615328..615359 /regulatory_class="terminator" gene complement(615353..615811) /locus_tag="lmo0577" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984939" CDS complement(615353..615811) /locus_tag="lmo0577" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0577" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464105.1" /db_xref="GeneID:984939" /translation="MDLVWTIIIQLVLSYVATVTFAIITNVPKRALNACGITGTFGWM AYWTLMQMDSGTGASSLAGAFVVAILSHFFAKHKKMPITIFNVPGIVPLVPGGLAYQA VRNFVLGDYTEAIGFSVQVTVVAGAIAAGLMLSEVFNHSIRAFRGRKERI" misc_feature complement(615398..615784) /locus_tag="lmo0577" /note="Threonine/Serine exporter, ThrE; Region: ThrE_2; pfam12821" /db_xref="CDD:432807" regulatory complement(615819..615824) /regulatory_class="ribosome_binding_site" gene complement(615825..616577) /locus_tag="lmo0578" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984630" CDS complement(615825..616577) /locus_tag="lmo0578" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464106.1" /db_xref="GeneID:984630" /translation="MSNETTDYLLETCLMAGKIMMESGAEMYRVEDTMNRIATVASNK KGISFVTPTGLFMSLEGERNVQLQQIPTRTINLEKVSMVNEFSRDFAEKRISLKELHT KLVNLDKDVRYFPIWLQIIAASLVSGSLMVIFGGGWFDFIPTCIIGAIGFIIFYYTQI FMKVKFLAEFLASLSVGLLAVLTISIGWGINLDTMIIGGVMPLVPGVPITNAVRDLIA GHLLSGMARGTEALLTSCAIGIGIAVVFRFFL" misc_feature complement(615831..616547) /locus_tag="lmo0578" /note="Putative threonine/serine exporter; Region: ThrE; pfam06738" /db_xref="CDD:461997" regulatory complement(616587..616592) /regulatory_class="ribosome_binding_site" regulatory 616727..616732 /regulatory_class="ribosome_binding_site" gene 616742..616951 /locus_tag="lmo0579" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986865" CDS 616742..616951 /locus_tag="lmo0579" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464107.1" /db_xref="GeneID:986865" /translation="MANIEYEIIEEIGVLSENARGWRKELNKVSWNGRPPKYDIRDWS EDHEKMGKGITLTDEEAEVLKKLLD" misc_feature 616778..616948 /locus_tag="lmo0579" /note="Uncharacterized conserved protein [Function unknown]; Region: COG4443" /db_xref="CDD:443543" gene 616973..617629 /locus_tag="lmo0580" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986638" CDS 616973..617629 /locus_tag="lmo0580" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464108.1" /db_xref="GeneID:986638" /translation="MFAYDIYEPIGRKDEDTFPVIFALHGFGGDELEMAGRLELLMDR FVVVSMRGDVEYGPAYGFYHMVTEGDPNPREVDYISLRVAQFIDKICTDYISIDKEQV FLAGFDQGAVLAISIMQSYGGQYKAAALLSGRLPYYMEERPANLMLKDKRIFIGHGIE DAVIQISEADDIARLFEKMGCQVEKHRYFIGHNVNEAEEDDLYRWFESFLPNQPVKNK " misc_feature 617027..617605 /locus_tag="lmo0580" /note="Predicted esterase [General function prediction only]; Region: YpfH; COG0400" /db_xref="CDD:440169" regulatory complement(617623..617655) /regulatory_class="terminator" regulatory 617634..617666 /regulatory_class="terminator" gene complement(617660..618844) /locus_tag="lmo0581" /db_xref="GeneID:984637" CDS complement(617660..618844) /locus_tag="lmo0581" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464109.1" /db_xref="GeneID:984637" /translation="MKNLVKVKVFPKFTKGYKEGYPLILKERMEKWPKELQEGDVLEL TDTNGQFIARGYHGEQNKGSGWLFTWDKKQQLDEDFLTNLITTAIEKRQFLFADDSTT AFRIFNGEGDGLGGFTVDFYDGYLVIQWYSLGIYAFQKMIIDIFLSFPEIKGIYEKRR FQEDTKDDFVAGQKATFPLIIKENGINYATYLDDGWMTGIFLDQRDVRRRISEDYSVS KNVLNTFSYTGAFSVAALFGGASKTTSVDVAGRSLSKTKEQLEVNGLDPNEQAIIVED VFHYFKYAARKQLTFDLVVVDPPSFARTKKVTFRAAKDYPAMLREIIDITAPNGTIIA STNYAGFGMKAFKKLIAEAFQTSDRTYKIVETHSLPTDFTVNKNFPEGNYLKVLFLTL DI" misc_feature complement(617666..618829) /locus_tag="lmo0581" /note="23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI [Translation, ribosomal structure and biogenesis]; Region: RlmK; COG1092" /db_xref="CDD:440709" regulatory complement(618854..618859) /regulatory_class="ribosome_binding_site" regulatory complement(618875..618914) /regulatory_class="terminator" gene complement(618932..620380) /gene="iap" /locus_tag="lmo0582" /db_xref="GeneID:985140" CDS complement(618932..620380) /gene="iap" /locus_tag="lmo0582" /experiment="EXISTENCE:[PMID:19448609]" /note="iap; p60; autolytic enzyme; can cleave bacterial peptidoglycan; secreted by SecA2 system" /codon_start=1 /transl_table=11 /product="invasion associated secreted endopeptidase" /protein_id="NP_464110.1" /db_xref="GeneID:985140" /translation="MKKATIAATAGIAVTAFAAPTIASASTVVVEAGDTLWGIAQSKG TTVDAIKKANNLTTDKIVPGQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIIT SIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTDKAVSTPVAPTQEVKKETTTQ QAAPAAETKTEVKQTTQATTPAPKVAETKETPVVDQNATTHAVKSGDTIWALSVKYGV SVQDIMSWNNLSSSSIYVGQKLAIKQTANTATPKAEVKTEAPAAEKQAAPVVKENTNT NTATTEKKETATQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNTNNTNTNTP SKNTNTNSNTNTNTNSNTNANQGSSNNNSNSSASAIIAEAQKHLGKAYSWGGNGPTTF DCSGYTKYVFAKAGISLPRTSGAQYASTTRISESQAKPGDLVFFDYGSGISHVGIYVG NGQMINAQDNGVKYDNIHGSGWGKYLVGFGRV" misc_feature complement(618935..620380) /gene="iap" /locus_tag="lmo0582" /note="invasion associated endopeptidase; Region: PRK13914" /db_xref="CDD:237555" regulatory complement(620390..620395) /regulatory_class="ribosome_binding_site" regulatory 620789..620794 /regulatory_class="ribosome_binding_site" gene 620805..623135 /locus_tag="lmo0583" /gene_synonym="azi; div" /db_xref="GeneID:984550" CDS 620805..623135 /locus_tag="lmo0583" /gene_synonym="azi; div" /experiment="EXISTENCE:[PMID:19448609]" /note="functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, especially gram positive pathogens, have paralogs that have been found to be nonessential but do function in secretion of a subset of exported proteins" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecA" /protein_id="NP_464111.1" /db_xref="GeneID:984550" /translation="MRQNYDDRKIVKQYREIARQIVKKEGLYKNMEQAELCEQTNFWR EKFKTKPMTDRDKINIFALAREAASRIIGLDAVVVQLIGALVLGDGKVAEMKTGEGKT LMSLFVMFIEVMRGNRVHLVTANEYLARRDREEIGQVLEYLGVSVALNESGLDIAQKK AIYTADVIYGTASEFGFDYLRDNMVRQKEDKVQSGLDFVLIDEADSILIDEARTPLLI SDRKEEDLSLYHTANKLVKKMMKDDYEMEEHKRFVWLNDAGIEKAQKFWGVESLYSAE AQSELRITMLLMRAHFLMHKDKDYVVLDDEVLIIDPHTGRALPGRRFNDGLHQAIEAK EGVEVKEESRTLATITIQNYFRMYKKISGMTGTAKTEEEEFRQIYNMDVVVIPTNLRV NREDMQDDIFYTKKEKGRAIVYEVSWRYEKGQPTLIGTSSIKSNEWISGLLDAAGIPH QVLNAKNHAQEAEIIAKAGKRGMVTLATNMAGRGTDIKLDPDVHKLGGLAVIGTERHE SRRIDLQLMGRSGRRGDPGFSKFMISLEDDLLEQFESKSWEKLSAKLKRKAPRDGKPV NSRKIHAVVVDAQKRLEGANYDIRKDLLSYDEVIDLQRKMVYKERDLLLERNKLGVSS EKILREVAEYSFIHPSDIPEEELEIYYSRQKELLGGTKFPISFDQVTLMEPREVVEEI VSWHKKERNKFPAETIAAIEREVYLNLMDQMWVMHLDAMVQLREGIHLRAYGQQDPLV MYQKEGAQLFEKFQADYHFYFAHALLELDPDGLIQG" misc_feature 620805..623132 /locus_tag="lmo0583" /gene_synonym="azi; div" /note="accessory Sec system translocase SecA2; Region: SecA2_Lm; NF012136" /db_xref="CDD:333724" regulatory 623237..623242 /regulatory_class="ribosome_binding_site" gene 623251..624423 /locus_tag="lmo0584" /db_xref="GeneID:984661" CDS 623251..624423 /locus_tag="lmo0584" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464112.1" /db_xref="GeneID:984661" /translation="MKGSFTKFKQFFIENKFVLGLLIFLLVALDIYVLTKIAFIFDPL MVILKTVAAPIILAGISYYLFNPIIDWLEKHKWKRGWAIALLYLVIIGLLILLFSFVI PAVKDQIVSLFKSFPGYWDQITQKFDEFSRSSLFDQLKDKLNTNMSDIMKTLSTKGTS VINSAISSIGSIVGTVTEVVLAIVTTPLVLFYLLKDGKKLPDFLLKMLPVNGRAHTRQ VLGEANHQISSYIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSIVPYLGPA IAITPAIIIAIVTSPWLLIKLIIVWCVVQLLEGKFISPQVMGKTLKVHPITILFVILV AGNLFGVLGVIFAVPGYAVLKVIVTHVFIWFKRISGLYGEQPESEYVETPTEEKEL" misc_feature 623293..624351 /locus_tag="lmo0584" /note="Predicted PurR-regulated permease PerM [General function prediction only]; Region: PerM; COG0628" /db_xref="CDD:440393" regulatory 624433..624479 /regulatory_class="terminator" regulatory 624667..624672 /regulatory_class="ribosome_binding_site" gene 624682..625395 /locus_tag="lmo0585" /db_xref="GeneID:984672" CDS 624682..625395 /locus_tag="lmo0585" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="secreted protein" /protein_id="NP_464113.1" /db_xref="GeneID:984672" /translation="MIFKKTLIVGLIGISSVTLFAPSAFAVTSEGDSKATVKFKAGTG VVDPVDPENPTKPIDPLDPSNPTDPGTGNTGSLTLDYVSSVNFGEHEVSSTEQSYSST SRKPFIQISDRRGTGAGWKVTATATAFQNEDGAASLSGATLSFKNGETASASTTATTP TAAQTVELPTDGTSIVSVVSAKESEGMGTWINRWFGATPNDTASLNDNVKLTIPAGSA TLGDHEATITWTLSDAPGV" misc_feature 624757..625380 /locus_tag="lmo0585" /note="WxL domain surface cell wall-binding; Region: WxL; pfam13731" /db_xref="CDD:433439" regulatory 625401..625442 /regulatory_class="terminator" regulatory 625451..625456 /regulatory_class="ribosome_binding_site" gene 625463..626488 /locus_tag="lmo0586" /db_xref="GeneID:986388" CDS 625463..626488 /locus_tag="lmo0586" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0586" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464114.1" /db_xref="GeneID:986388" /translation="MKKSFLSLLFIIPLLVTCGNFTEAQAAEGDVGYSVQAHIPANQI DKRQTYFDLKMQPKQKQTVEIDVLNSSNEEIQVEAAINYASTNRTGVIDYTKNDLTKK DKSLKYPLPELAEIPDDQKRLTIPVNGKKTVQVMIEMPAEKVDGVVLGAVEFKKKNTN ETKKTKGVSLKNEYSYIVGMQLSETDKQVKPHMNLLSIKPALINYHTAIVAKLQNDQP VILENLSIDAKAYQQNSNKLLYQTKKTDMKMAPNSNFDFGIDWENQPLKEGKYRLKMT ATNGVETWTWDEAFTIGKEGQNLNKEAVNLEKTNTWLYVAIAAGVVLIALIIILVIRK RRNKQEK" misc_feature 625463..>625612 /locus_tag="lmo0586" /note="NlpE N-terminal domain; Region: NlpE; cl46464" /db_xref="CDD:480804" misc_feature 625562..625924 /locus_tag="lmo0586" /note="Bacterial protein of unknown function (DUF916); Region: DUF916; pfam06030" /db_xref="CDD:461805" misc_feature 625961..626365 /locus_tag="lmo0586" /note="Protein of unknown function C-terminal (DUF3324); Region: DUF3324; pfam11797" /db_xref="CDD:463353" regulatory 626493..626498 /regulatory_class="ribosome_binding_site" gene 626506..628971 /locus_tag="lmo0587" /db_xref="GeneID:986515" CDS 626506..628971 /locus_tag="lmo0587" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="secreted protein" /protein_id="NP_464115.1" /db_xref="GeneID:986515" /translation="MAFKKLILVLTMAALFLGLKIVVAAENEPTDLASNEAIVTNFAD LKTAISEDNGIDTVYLGADVELSGGIIIPATKKTFTLSGKNPATGEIHTLTETMASAG AQSSVITVNTNTGAKETTLKDINVVGKNYYGTISVYGAAKNVVQNYENVHYQGPQMIY NLNGTANFKGTNDITIASVVSGSAAPNEVAEIKGVSASGKLTINHASSNANSAFWFGG GTAEVNTFTVEENADVTIISNGTGMFYRSGTKPVDIDVKKNAKLDITSNNNIFRDTPG GAVKIAEGADVTMTKTAGGNPLLWVADDITVSPDARFILNKTGGTGYIIQFYNATAKL DINDPRSFLIATNSNTPMFYWPYANTFNLSAQMVNYWDTAGTIDRTDLAAQSFSLPNG ENVTGSLTYTGTTTKILSTNAGMTPTNFNQNTARMIAMGRLEGTINPVTDADNEITGT ATPNAFINISYTENGGNKVLEGQSNDAGTYRIAIPNGFIKPYIKLTTTIKQDQKRITL DDVTVEDVTPPSGDAVTQIIQLGDPFPDVAELVTNIYDHSDNTSGAGVTTTLQSAPDT NVFGPAEAIVRLEDKAHNHVDIRVPVFIKDDATEIQDGKALRAADFSVNVKDINELND AELEQFILTKSGAKAFQIETGEDLTTDVKVASTNLKKETGTYTATIQIGGLTKEIAIQ VTGELKFNHVPETISFETMGLNQQKNIAKRNADFDLSVLDSRGAGDNFSVTAAIKAPL TSTANSAHTLPNGLIFIDNAGEKKILSDEPITIFQSQSASDMIVPIEWAEDRGILVEV DAAEAYVDESYETTIEWTLTVAP" misc_feature 626593..>627918 /locus_tag="lmo0587" /note="Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport]; Region: AidA; COG3468" /db_xref="CDD:442691" regulatory 628975..629007 /regulatory_class="terminator" regulatory 629076..629081 /regulatory_class="ribosome_binding_site" gene 629088..630491 /locus_tag="lmo0588" /db_xref="GeneID:984699" CDS 629088..630491 /locus_tag="lmo0588" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA photolyase" /protein_id="NP_464116.1" /db_xref="GeneID:984699" /translation="MTSVMWFRRDLRVNDNKALYHACKEDDLLLLFQVNPAQFITGSP SHQAFFASVAHFKQEVDKTALLQIMFGEPVECLKQLKETLPSWDKVYFNRDETGYGAE RDEAAKTFFDEQEIEVQAFHDSYLHSAEEVKKSPTEYYKIFTPYYKKWREEIKETPFK VTLKADNIRKENLFPKYEEQFAEMTCDLPILDSGEKTANTRLANFIKHDVADYDKARD FPELDKTSHLSRYLRTGEISVRTIWQALQENEATEGRAIFEKELCWRDFYNMIYVSFP NQKNEPIQENYRFIEWENNREFFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMVTA SFLTKDLLIDWRFGEKYFQQMLIDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQ KFDPTGKFIRKYVKELANLPDKFIHQPEKMSEIEQKEYGLLLGKDYPFPLIDHKERRK LAIARYEFSKEHYRGNI" misc_feature 629088..630458 /locus_tag="lmo0588" /note="Deoxyribodipyrimidine photolyase [Replication, recombination and repair]; Region: PhrB; COG0415" /db_xref="CDD:440184" regulatory 630500..630534 /regulatory_class="terminator" regulatory 630616..630621 /regulatory_class="ribosome_binding_site" gene 630629..631042 /locus_tag="lmo0589" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985047" CDS 630629..631042 /locus_tag="lmo0589" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0589" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464117.1" /db_xref="GeneID:985047" /translation="MAQFLKLFLTSAVVFLVFDLFWLLVASKKMYQQFIGDLMGDVRL APAVIFYFIYVVGVTFFVLLPGTEKGSLGYTILAGALFGLVCYATYDLTNLATLKDWP ITMTIIDLVWGTAVTTVTSVIVYFINLHFFSGAGS" misc_feature 630635..631030 /locus_tag="lmo0589" /note="Uncharacterized membrane protein [Function unknown]; Region: COG4852" /db_xref="CDD:443880" regulatory 631030..631035 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0589" gene 631045..632811 /locus_tag="lmo0590" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985311" CDS 631045..632811 /locus_tag="lmo0590" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464118.1" /db_xref="GeneID:985311" /translation="MESESKRLLQSMLNGAAEVISKKDELNRINVFPVADGDTGSNLA SLMQAIIDHVSPREYSTKELLEEVASAALIGARGNSGMIFAQYLNAVAESYHHIESTF DGLVIAFQKAVHKAYEALLDPKEGTILSVMKAWSEELAGTYEQERSFQQSLLNAQIVA EKALINTEFQMPILRKNRLVDSGAKGFYYFIAGLTNAYCGKAVSATVRFMEVEQTAEH MHVETSEPKYRYCSEFIIKQATISHQHLQEILASKGDSLVIAGNEKQIKIHIHTNEPK EVLSLMAAYGMMTYQKVDDMRLQYEVTKKPRAKIAIVTDSIADLPEAFLLEHQVHVLP MNILAGDENFLDKLTVGPDMMQEKLRKQTKMSTAQPTIRTVDALLSFLENKYEHVLVI SVAAKLSGTYQLIKQRIKVRELSSDWIRVIDSKLNSVAQGILVKQAVELVESGKSWES IYPEVEQMIERTFIYVAVADLSPMVQSGRIPRVLGKLAQKLSLYPIVSLDESGDGKLI GVSFSQKQSMKKIIKKIAKLQLKELAITHVSSRDNAAIWQKQLEKETGKISYLVDSSA AIAISAGLGSVAVAGIKKEETI" misc_feature 631060..632577 /locus_tag="lmo0590" /note="Predicted kinase related to dihydroxyacetone kinase [General function prediction only]; Region: YloV; COG1461" /db_xref="CDD:441070" regulatory 632795..632800 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0590" gene 632811..633581 /locus_tag="lmo0591" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984755" CDS 632811..633581 /locus_tag="lmo0591" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464119.1" /db_xref="GeneID:984755" /translation="MYWTVALALLVYFILWFIISKIKGKYSLVDIAWGGGFVVVAWTG FLTTFSVTTQSITILILVTLWGVRLFWHLARRNWNKPEDYRYVNMRKRWGTTLVNLKA FLNVFVLQGVLLFIIALPITHSFANETATFAWWQILGIVIWIIGFIFEVGGDLQLENF KKNPANKGKLLTSGFWSVTRHPNYFGEALSWWGVFLVALTQLTDLWLITSPIVITLLL LFVSGVPLLEKKYQDRADFQAYANKTSKFFPFIGKKGL" misc_feature 632814..633575 /locus_tag="lmo0591" /note="Steroid 5-alpha reductase family enzyme [General function prediction only]; Region: COG3752" /db_xref="CDD:442966" regulatory 633696..633701 /regulatory_class="ribosome_binding_site" gene 633709..634251 /locus_tag="lmo0592" /db_xref="GeneID:986217" CDS 633709..634251 /locus_tag="lmo0592" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0592" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464120.1" /db_xref="GeneID:986217" /translation="MKKEKTVLIMNFDEESISYQAFSEMKRLHQERKIIGYQMAVVKH EPGNKLVAQDFLDFTGADKNMKDSLIGMLIGILGGPFGILIGWMVGAIVGSMRDAGEV KDALTVFERTLKTIPEGSTGVILIATEQELANVNDVAMDELHGRVQRMDEAIVAQEIK SAQETEGKAKDSAKKHWFSK" misc_feature 633724..634149 /locus_tag="lmo0592" /note="Uncharacterized membrane protein [Function unknown]; Region: COG4803" /db_xref="CDD:443831" regulatory 634264..634298 /regulatory_class="terminator" regulatory 634464..634469 /regulatory_class="ribosome_binding_site" gene 634479..635279 /locus_tag="lmo0593" /db_xref="GeneID:984793" CDS 634479..635279 /locus_tag="lmo0593" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="formate transporter" /protein_id="NP_464121.1" /db_xref="GeneID:984793" /translation="MDVESSPLMQKIDYSTRKKIDLVNNSILRYIVRAMLACLFLTLG TAVAVMIGDKVDHFAPGLGKITYAFMFSWSLVMIIYMNAELGTSNMMYMTTGVYQKIV KPGKALQILLLCIVCNLLGGILAGYLVSLTSVFHNLPADHFLFTAVSGKLEKAPLQIF VEGIFANIVVNTAVLCTLRMKDDAGKVIAMIFIIFIFAFLGFEHVIANFSSFSLAFFA SGGTLAAMTAGNVTVNLVLALLGNFVGGGLVIGLGYAWLNRTKSIYKD" misc_feature 634506..635207 /locus_tag="lmo0593" /note="Formate/nitrite transporter FocA, FNT family [Inorganic ion transport and metabolism]; Region: FocA; COG2116" /db_xref="CDD:441719" regulatory complement(635275..635311) /regulatory_class="terminator" regulatory 635288..635321 /regulatory_class="terminator" gene complement(635317..636423) /gene="metX" /locus_tag="lmo0594" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985447" CDS complement(635317..636423) /gene="metX" /locus_tag="lmo0594" /EC_number="2.3.1.31" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine" /codon_start=1 /transl_table=11 /product="homoserine O-acetyltransferase" /protein_id="NP_464122.1" /db_xref="GeneID:985447" /translation="MTLQQKELFQKSPLLLENGETLSPVLVGYETYGTLSASRDNCIL LEHALTGTAHAAKHFEDDAPGWWDDYIGPGKTIDTDKYFLVCTNVFGGCSGTTGPSSI NPKTGEPFRLQFPGFSIKDIIKVQRELLEQLGVTRIVSVIGGSMGGMQATEWAIDYAD ITDSIINIASPLAAGPDAIGYNLIMRMAILNDPDFNGGNYVGQPEGGLATARMVGMMT YRTSELFSKRFERFTVAESSPAAFSKEHFQIESYLQYQGDTFVERFDANSYLYLTKAI DLFDVTAPAKDDLPAFSKIKIPYLLIGITTDQLFRIHDLRRGYELLKEWDVPVTYHEV ASEYGHDAFLVEKEVPKFEPLIRSFLSNLPVKSI" misc_feature complement(635341..636396) /gene="metX" /locus_tag="lmo0594" /note="homoserine O-acetyltransferase; Region: homoserO_Ac_trn; TIGR01392" /db_xref="CDD:273596" regulatory complement(636433..636438) /regulatory_class="ribosome_binding_site" gene complement(636440..637717) /locus_tag="lmo0595" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984789" CDS complement(636440..637717) /locus_tag="lmo0595" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="O-acetylhomoserine sulfhydrylase" /protein_id="NP_464123.1" /db_xref="GeneID:984789" /translation="MSNEYKFETIQVHGGHTPDGDTHSRAVPIYQTTSYTFDSPEHAA ALFGLQETGNIYTRIMNPTTAVLEERLTLLEGGIGAVATASGMAAITYSILNIAGSGD HIVAAATLYGGTHTLFSHTFKTFGIDVTFVDPNEPENFEKAIKDNTKAVFIETIGNPD INIVDIEKVAKIAHASDIPLIVDNTFATAYLNRPFDFGADIVVYSATKFIGGHGVAIG GAVIDSGKFNWANGKFPKLVVPDDSYNGLSYTNDVGAAAYITKLRVSLLRDTGAALSP FNAFLLILGLETLSLRLEQHVKNAKQVANFLNDHPKVAWVNYPGLKDNKYHELAQKYL PKGPGSIFTFGVKGGYEAGKKVIESVELFSHLANVGDAKSLIIHPASTTHQQLSEEQQ LTAGVKPESIRLSIGIENADDIIQDLTKALEQI" misc_feature complement(636443..637717) /locus_tag="lmo0595" /note="O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent [Amino acid transport and metabolism]; Region: MET17; COG2873" /db_xref="CDD:442120" regulatory complement(637728..637733) /regulatory_class="ribosome_binding_site" gene 637826..637926 /locus_tag="lmos26" /db_xref="GeneID:18245131" misc_RNA 637826..637926 /locus_tag="lmos26" /product="SAM" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245131" regulatory 638148..638153 /regulatory_class="ribosome_binding_site" gene 638165..638692 /locus_tag="lmo0596" /db_xref="GeneID:985266" CDS 638165..638692 /locus_tag="lmo0596" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464124.1" /db_xref="GeneID:985266" /translation="MKTFTRILVLLAGIAMIILGVWFLFHPGISLLTSTLMFGFLLLI SGIFHTISYFSDRKSQNVSGWVLADGILSILLGFLLLFNEFDGTLTLVLLFGMWVLFA GIMRTIGAFTAKQNNVQGWGWILTIGIIGIIVGFIALFNPVVSAIGIVLVVAIFFIVQ GIGAIATFFFIGKNS" misc_feature 638180..638683 /locus_tag="lmo0596" /note="Acid resistance membrane protein HdeD, DUF308 family [General function prediction only]; Region: HdeD; COG3247" /db_xref="CDD:442478" regulatory complement(638689..638724) /regulatory_class="terminator" regulatory 638700..638735 /regulatory_class="terminator" gene complement(638781..639482) /locus_tag="lmo0597" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985531" CDS complement(638781..639482) /locus_tag="lmo0597" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Crp/Fnr family transcriptional regulator" /protein_id="NP_464125.1" /db_xref="GeneID:985531" /translation="MSLLNEENSFYNVDLLNLLKDSSEAVLPYKRIRFRRNQQILAEG AETDYFYIIEDGVVSMSKNTCKEDSIINFLGKQECIGPLTLLGGAKSPVNYTTISEVS VYQFERKYVLNKFLSSPDVFWQMNALMQSMVTPMLEREGYVNLPSSEKVLAGLIACGE RFGRIESDGSCLIPYYFTQKILGNYLNLARAYVATNLRKLEEDGIIALSPKPWRVNNF EIHKQKLKENHEPYI" misc_feature complement(638826..639434) /locus_tag="lmo0597" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" regulatory complement(639492..639497) /regulatory_class="ribosome_binding_site" gene complement(639558..640106) /locus_tag="lmo0597a" /db_xref="GeneID:16695798" CDS complement(639558..640106) /locus_tag="lmo0597a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475631.1" /db_xref="GeneID:16695798" /translation="MRDQKLKFLVVDALFAVIIALLAQVAIPLGPIPLTGQTFAIGLA ATILGARHGTISVLVYIVLGAVGIPVFQGMTAGIGIIFGPTGGFIIGFIFNAFLTGWL LEKTKFTVPYAIVANILGAIVTLIFGVLWLKVSTGLDWPTAFLTGMVPFIIPGIIKAV FAALLGIIIRDRLIKAKLLRAS" misc_feature complement(639597..640103) /locus_tag="lmo0597a" /note="Biotin transporter BioY [Coenzyme transport and metabolism]; Region: BioY; COG1268" /db_xref="CDD:440879" regulatory complement(640116..640121) /regulatory_class="ribosome_binding_site" regulatory 640287..640292 /regulatory_class="ribosome_binding_site" gene 640300..640632 /locus_tag="lmo0599" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985146" CDS 640300..640632 /locus_tag="lmo0599" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464126.1" /db_xref="GeneID:985146" /translation="MEVNPQFKKGVLELCCLFLIQKKDCYGYELANQVSKYIEVAEGA IYPVLRRLVKEEYCSTYLVESNEGPSRKYYQLTVKGEIYLNELISEWNNFTDSVAKLL TEGEAVNE" misc_feature 640309..640599 /locus_tag="lmo0599" /note="DNA-binding transcriptional regulator, PadR family [Transcription]; Region: PadR; COG1695" /db_xref="CDD:441301" regulatory 640610..640615 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0599" gene 640625..641215 /locus_tag="lmo0600" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985344" CDS 640625..641215 /locus_tag="lmo0600" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0600" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464127.1" /db_xref="GeneID:985344" /translation="MNKQDFLNELNQRLELLDPKERRELLSDYQEHFRNGIEAGKSEE QIVFDLGKPEEIAADIISERGIREEPTEMDYYYVPRKNQNENRSVSKQILIGVGLFLL DVCLIIPIMVSLWSLVISLWVTVGAFLLSPVILGVGILFGADFEFYQMFVSIGLVGLG LMLLFVANALTQLTSKVTMAIIQWHKYAVKGGGKNA" misc_feature 640625..641197 /locus_tag="lmo0600" /note="Protein of unknown function (DUF1700); Region: DUF1700; pfam08006" /db_xref="CDD:285278" regulatory 641193..641198 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0600" gene 641208..642308 /locus_tag="lmo0601" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984830" CDS 641208..642308 /locus_tag="lmo0601" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell surface protein" /protein_id="NP_464128.1" /db_xref="GeneID:984830" /translation="MHKHHLSKKLFFAGLVLFIIGAIGVAFTMNTGKMIEKGEPLTKQ WDLSTENIKKIAFSSERDASIEWKESTTGKNYIELKGNYSANDKKAIQQLEPVSEDGT SFDITVPEEDDWYNGFGKIYAYGKQKVTIYLTKDTKLADLEVKSHSGDIDVADFKVKK FVSSTNSGELKVTNLEANTAQMATSSGDLTLSNIKANSSIETDSGKTELTNLTGDLEV NGGSGDVNVAGVKAKKLKIAIDSGDIELTSGTVTDLAVLTTSSGDIDANTKGKIQAES DSGSIELAGATNNVTAKTSSGDIDVAFTKQVKNIEINSDSGEVELELPGDFKAIYEAS SNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK" misc_feature 641361..642302 /locus_tag="lmo0601" /note="Putative adhesin; Region: DUF4097; pfam13349" /db_xref="CDD:433135" regulatory 642400..642405 /regulatory_class="ribosome_binding_site" gene 642414..642914 /locus_tag="lmo0602" /db_xref="GeneID:984599" CDS 642414..642914 /locus_tag="lmo0602" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcripitonal regulator" /protein_id="NP_464129.1" /db_xref="GeneID:984599" /translation="MDFHIRKATNSDAEAIQHVAITSWHHTYQDLIPGDVQDDFLERF YNVETLHNRISATPFAVVEQADKVIGFANFIELEKGKSELAAFYLLPEVTQRGLGTEL LEVGMTLFHVPLPMFVNVEKGNETAIHFYKAKGFVQVEEFTEDFYGYPLETIRFNLNH HAFEEE" misc_feature 642417..642854 /locus_tag="lmo0602" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" regulatory complement(642909..642956) /regulatory_class="terminator" regulatory 642920..642967 /regulatory_class="terminator" gene complement(642962..643348) /locus_tag="lmo0603" /db_xref="GeneID:986186" CDS complement(642962..643348) /locus_tag="lmo0603" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0603" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464130.1" /db_xref="GeneID:986186" /translation="MRFIIAYLSIFVLGIFSALLVETILYDNVTPQLVFSAILFAAPV ILVASTLGEIFYGFSKKASYFTFAIWGFAYGVVAAVIILSIIQVSGMLISVGVSILAG VIMALLAIIFFFLRGGKSTSGKAATK" regulatory complement(643356..643361) /regulatory_class="ribosome_binding_site" gene complement(643400..643744) /locus_tag="lmo0604" /db_xref="GeneID:985855" CDS complement(643400..643744) /locus_tag="lmo0604" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464131.1" /db_xref="GeneID:985855" /translation="MLDKKIISALSYFSLFFAPVITPAIIWCTTKDKEIRHHVKWALL TQATFVAGIVVMILLYNNVPFSTNSADTINFLALATVFFIVFLNVSILIFNLIRGITR IVKHSDDNWARC" regulatory complement(643756..643761) /regulatory_class="ribosome_binding_site" gene complement(643891..645231) /locus_tag="lmo0605" /db_xref="GeneID:985094" CDS complement(643891..645231) /locus_tag="lmo0605" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464132.1" /db_xref="GeneID:985094" /translation="MSSVHKVASISLFTLAWPIFLEQFLRLMISYIDVFMLGHYSDDA VAATGVANQILVISIIIYGFISVGVQIIVAQMIGAKKHKEIENVITNGLVVAFLIGIV MSIIFIFMSKNFLTWMGIDPHLVQVGAPFLEIIGGSSVVIAIHASILPILRAHGYVRQ SILVPVTISIINVVGNYLFLYGPLAYLDYGVAGVGISTAVANFVGMGLAIWMLRKYIG YTFHFKKLEQVSKKLLYSILRLGLPSAGENLSYAGSQLVVTAIIAILGTEALTTKVYA STVSQFVALFAIALGQASQIIIGRAVGAKEIDKAYKQGLRSWKIGLVVAIVVSVSIYL FAEPIMRLFTTNTEIIAMTKELFLLSIFLELGRATNIIIISSLNSTGDVRFPFICGLI VMWIVSLPFSYVLGISAGLGLVGVWLAYIIDEGVRAVLMYRRWRSKVWSLKSVI" misc_feature complement(643897..645207) /locus_tag="lmo0605" /note="Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; Region: MATE_like_8; cd13134" /db_xref="CDD:240539" regulatory complement(645239..645244) /regulatory_class="ribosome_binding_site" regulatory 645384..645389 /regulatory_class="ribosome_binding_site" gene 645397..645858 /locus_tag="lmo0606" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985290" CDS 645397..645858 /locus_tag="lmo0606" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="NP_464133.1" /db_xref="GeneID:985290" /translation="MSSKNQDLGHSVIKAFMNFKHAEIKSFQIPGYSKSETRFIFILS RGLKSRGPKIRVSDLGHMLRISKPSVTQMIQSLEGKGLIKRVQNPEDKRSMYVELTEV GAGVSEKMLDEFQASFEDMQEFLGEDDMKKLITLLEKLTDYLNTKSENKEA" misc_feature 645397..645822 /locus_tag="lmo0606" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" regulatory 645865..645871 /regulatory_class="ribosome_binding_site" gene 645878..647590 /locus_tag="lmo0607" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985501" CDS 645878..647590 /locus_tag="lmo0607" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_464134.1" /db_xref="GeneID:985501" /translation="MKRLKPYWLSITAVLVLTFGQVIGQLYLPTLMSNIIDKGVVTGD TDYIWSTGMKMLLISFASVILSVIVVYLASRISMGFGKELRDKIFTKVEDFSLQEFDK VGTSSLITRTTNDVVQIQNVLYMMMRLMVMAPIMLLGGIIMAVGRDAKLSLIFVVVLP LLLLLVVILGGKAMPMFKSLQKKMDKLNRVIREGLTGIRVVRSFNRNEDELEKFEEAN ADYATTAIKVNRLLSLMSPLMMLLMNLTSIAIVWIGSIFIGNGDMQVGDLMAFIQYAM QIMMSFMMLSAVFIMIPRAGASAERINEVLDMNAEILNPENPKTSTPPAKLSFEHVTF RYEGAEKPVIEDITFEANAGETIAIIGSTGAGKSTLINMIPRFYDVESGVVKINGIDV REMDQSSLRQKIGLVPQKAVLFTGTIASNMRYGKEDATDEEIWEALRTAQAENFVSKL ANGLGSRVEQGGNNFSGGQKQRLSIARSLIRKPEIYIFDDSFSALDFKTDAKLREALK AETTEAVTLIVAQRITSVVNSDQIIVMNEGKIAGMGTHEELKESNQIYQEIMRSQLSE EEIA" misc_feature 645878..647578 /locus_tag="lmo0607" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:440747" regulatory 647574..647579 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0607" gene 647587..649404 /locus_tag="lmo0608" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984780" CDS 647587..649404 /locus_tag="lmo0608" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_464135.1" /db_xref="GeneID:984780" /translation="MSGPGPGGGMRMQTAAKPKNFKQTLFRLLGYMKPRSVAIIVVFI FAILSTIFNIFSPKELGKATTEIFKGVMSQDGINNDKIFNILMIVLVLYLGSSLFSFI QQYVMSSVAQRTVYDMRKDLKAKMARLPLKYYDTRSNGDILSRSVNDMDNIANTLQQS LTQAITAIVQMIGVLIMMLTISWQMTLIVLVTVPISIILVAIIAGRSQRYFGAQQRNL GILNDTVEETYGGQTIIKAFGQEKKTLVKFDEVNEDYFKAAKKAQFISGIMMPVMQFV GNLGYVGVCVAGGIFVTNGTLQVGDIQSFTQYVQLFTQPISSVANIANIIQSTIASAE RVFEMMDEEEEKDEIPANVNQVAGEEHSIVFDHVKFGYTPDKPLMTDLNIHVEEGQMV AIVGPTGAGKTTIINLLMRFYDVDGGQIRMKGIDTRDMTKDAVREKFGMVLQDTWLFN GTIADNIAYGREGATKDEVIGAAKAAYADDFIRRLPNGYDTILNEEGSNISQGQKQLL TIARAILSDPSILILDEATSSVDTRTELNIQLAMGNLMEGRTSFVIAHRLSTIRDADL ILVMNHGSVIEQGTHQELLDAKGFYADLYNSQFTGAQAV" misc_feature 647638..649392 /locus_tag="lmo0608" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:440747" regulatory 649414..649451 /regulatory_class="terminator" regulatory 649505..649510 /regulatory_class="ribosome_binding_site" gene 649520..649819 /locus_tag="lmo0609" /db_xref="GeneID:986403" CDS 649520..649819 /locus_tag="lmo0609" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phage shock protein E" /protein_id="NP_464136.1" /db_xref="GeneID:986403" /translation="MYQSITANDLEQDLKKVPHNILDVRDADAFVEGHIPDAINIPIN ELPEKLATLDKEKAYTIICYAGGRSERASQFLAAEGFDVTNVMGGMGAFHGTVTN" misc_feature 649520..649795 /locus_tag="lmo0609" /note="Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]; Region: PspE; COG0607" /db_xref="CDD:440372" regulatory complement(649817..649853) /regulatory_class="terminator" regulatory 649828..649864 /regulatory_class="terminator" gene complement(649864..651633) /locus_tag="lmo0610" /db_xref="GeneID:985509" CDS complement(649864..651633) /locus_tag="lmo0610" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_464137.1" /db_xref="GeneID:985509" /translation="MKKMGVKIGLCILLIMPFTISFSANVSAEENISIKAAQDVVNIP DPALKSYLNGLLGQPSTSDITEAQMDTITDVTISNASLTDLTGLDYAHNLTILHLTNT GVTDYSLVANIPSLTNLNISGSNLTTNSIPDLNGLTNVTNLNLSSGKLDNSALTKFNK LPNLTFLNLDNNPSITDFMPLKSLPNLASLFIQFCGVNDFRGIDSFPKLTNLAAFGQN VGSAILINSTIKSSALNYNEANQTIFVPFTLMTERSMNFDGYLFPFTTNTASSSTYFT LNGVQISGSRLSIDDTGVTVSGITKDFFDSITKMEYNAFYDNPAGSYNSPPNFNSYSV SSGTYDHYFDIDHSLTITNDSAISYGEQTTVTEEQFLKDVHAETDDGTPVTSDFNTIV DFSKPGVYTVTLNAENAAGLKATPTQVTVTILAKPVITADKSISYTKDTTKTEQQFLQ DIAAKTSDGSKVTSDFDSVVDLAKVGTYKVTLNAVSADGLNADPVIILVNVVAGNEPP TPPGPGPDPTPDPTPNPNNPNINPNPDNGQSAKSEIASNPSNSEVNIALPNTGDASQA TTVLIGIILAGVAILFFRKRKHS" misc_feature complement(649876..651618) /locus_tag="lmo0610" /note="class 1 internalin InlK; Region: internalin_K; NF033186" /db_xref="CDD:467984" misc_feature complement(651355..651420) /locus_tag="lmo0610" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature complement(651289..651354) /locus_tag="lmo0610" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature complement(651217..651288) /locus_tag="lmo0610" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature complement(651145..651216) /locus_tag="lmo0610" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature complement(651076..651144) /locus_tag="lmo0610" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" regulatory complement(651749..651786) /regulatory_class="terminator" gene complement(651794..652420) /gene="acpD" /locus_tag="lmo0611" /db_xref="GeneID:985209" CDS complement(651794..652420) /gene="acpD" /locus_tag="lmo0611" /experiment="EXISTENCE:[PMID:19448609]" /note="FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds" /codon_start=1 /transl_table=11 /product="azoreductase" /protein_id="NP_464138.1" /db_xref="GeneID:985209" /translation="MTNVLFIKANGLPAERSVSVALYEIFLTEYKKSHPDDNVTELDL FEADLPYYDVTMMSGLHKEAAGETLSPEEKRLADIANSYLDQFLAADKIVMAFPLWNF SIPAQFLTYLFYLNQAGKTFKYTANGPVGLVADKKIALLNARGGIYSDGPMQSFEMSL NYVKNVLAHFGISEPEMVIVEGHNAKPDQAKDIISAGAKEAVELAKIF" misc_feature complement(651797..652420) /gene="acpD" /locus_tag="lmo0611" /note="NADPH-dependent FMN reductase; Region: FMN_red; cl00438" /db_xref="CDD:469770" regulatory complement(652430..652435) /regulatory_class="ribosome_binding_site" gene 652589..653044 /locus_tag="lmo0612" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984912" CDS 652589..653044 /locus_tag="lmo0612" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MarR family transcriptional evidence" /protein_id="NP_464139.1" /db_xref="GeneID:984912" /translation="MEVKILKPCTERSELLYRMHLLSKEISHVFEQQTNMSFTKVEIL FHIQQTPGQSQNRLREKLYIDSASITRHLKRMEEQGLIVRKKQDENKRYTYLFLTSAG EAELATLLLEKEKFQNGALEAFSEEEVSALLKSVTKMMNNVEKMEEKLK" misc_feature 652607..653014 /locus_tag="lmo0612" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" regulatory 653028..653033 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0612" gene 653041..653982 /locus_tag="lmo0613" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987413" CDS 653041..653982 /locus_tag="lmo0613" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_464140.1" /db_xref="GeneID:987413" /translation="MKAVVIENYGGKEELKEKEVAMPKAGKNQVIVKEAATSINPIDW KLREGYLKQMMDWEFPIILGWDVAGVISEVGEGVTDWKVGDEVFARPETTRFGTYAEY TAVDDHLLAPLPEGISFDEAASIPLAGLTAWQALFDHAKLQKGEKVLIHAGAGGVGTL AIQLAKHAGAEVITTASAKNHELLKSLGADQVIDYKEVNFKDVLSDIDVVFDTMGGQI ETDSYDVLKEGTGRLVSIVGISNEDRAKEKNVTATGIWLQPNGEQLKELGKLLANKTI KPIVGATFPFSEKGVFDAHALSETHHAVGKIVISFNK" misc_feature 653041..653967 /locus_tag="lmo0613" /note="alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases; Region: MDR_like_2; cd05289" /db_xref="CDD:176191" misc_feature order(653158..653166,653173..653175,653419..653421, 653431..653433,653497..653514,653569..653574, 653578..653580,653620..653622,653677..653682, 653746..653751,653803..653811) /locus_tag="lmo0613" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176191" regulatory 653995..654025 /regulatory_class="terminator" regulatory 654065..654070 /regulatory_class="ribosome_binding_site" gene 654078..654611 /locus_tag="lmo0614" /db_xref="GeneID:985507" CDS 654078..654611 /locus_tag="lmo0614" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464141.1" /db_xref="GeneID:985507" /translation="METRELKNGQIMMIRKATKEDSSNIITYLNEVAGETDYLSFGQG EFAFSIAEEAEYIEESDKNPGSVMLLCFIDDELASISQLIGHIKKRELHTSELAISIR KKYWGLGIGTICMEELIKYAKSSEYLKLIYLEVVTENKRAINLYKKFGFIEAGEIPAL MQVDRRYLDVTMMYLVI" misc_feature 654111..654608 /locus_tag="lmo0614" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" gene complement(654608..654850) /locus_tag="lmo0615" /db_xref="GeneID:984917" CDS complement(654608..654850) /locus_tag="lmo0615" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0615" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464142.1" /db_xref="GeneID:984917" /translation="MHPIEQLLANNNTTATDIESNTRLKEGSLQKIIDKDIRTSDISL RVLSQIAIFLNTGADIIAKQLSDIEVANDLAFLIED" regulatory complement(654858..654863) /regulatory_class="ribosome_binding_site" regulatory 654945..654950 /regulatory_class="ribosome_binding_site" gene 654957..656708 /locus_tag="lmo0616" /db_xref="GeneID:985453" CDS 654957..656708 /locus_tag="lmo0616" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycerophosphoryl diester phosphodiesterase" /protein_id="NP_464143.1" /db_xref="GeneID:985453" /translation="MKDLKDSFKVLYQFKTDYLKVTLLLTILQAFVIGPFIYYFFFFI LRVIGVPGITDANLGEVFSSPVAIIMLLILALLILLFVYYELGFFIMMAIYQLRGESY TFFKIIQRLNVKAKYFLSYQAIYFLLYFFLLLPIAGLSLPITITENLYLPHFITDELM KTTTGTWLYVIAIAIIFYISARLVFALPYFIEDKSLKISGAIRKSWKYPQKHLFFMLL KWVLIIVAIGFLVSIIATIIMLPLLLVEKITPGIAVVIAGITLTILQVIGFFAAGIFQ GIIAQLLVKNAFAIKEQPALVTRSQFPHKKRFIIVAIIIFIIFSSFNIYTVNATLYEP NTKIIAHRGDTMNAVENTVEAIESAAEAGADYSEIDIQETKDHQFVVFHDMTLRRLAG SSKRVADMTLKELQQTKVRSGDYSSHIASFDEIIKIAKKNKIDLLVEVKLHGGESSDM VERLVTLLKKEKVTDKYLVQSLDQPVIEKIEQADPTLETGIILALNIGNLPKTSADFI VLEDFSINKRLLTQAKQNNKMVFVWTVNKEKLMQMYLRKNIDGIITNYPKKAIELRES FNENDSLRSRIENRLGF" misc_feature 654957..656705 /locus_tag="lmo0616" /note="Membrane-anchored glycerophosphoryl diester phosphodiesterase (GDPDase), membrane domain [Lipid transport and metabolism]; Region: UgpQ1; COG4781" /db_xref="CDD:443811" misc_feature 655968..656627 /locus_tag="lmo0616" /note="Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases; Region: GDPD_memb_like; cd08579" /db_xref="CDD:176521" misc_feature order(655977..655979,656058..656060,656064..656066, 656103..656105,656271..656273,656364..656366, 656553..656555) /locus_tag="lmo0616" /note="putative active site [active]" /db_xref="CDD:176521" misc_feature order(655977..655979,656103..656105) /locus_tag="lmo0616" /note="catalytic site [active]" /db_xref="CDD:176521" misc_feature order(656058..656060,656064..656066,656271..656273) /locus_tag="lmo0616" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:176521" regulatory complement(656707..656742) /regulatory_class="terminator" regulatory 656717..656743 /regulatory_class="terminator" gene complement(656749..657243) /locus_tag="lmo0617" /db_xref="GeneID:985148" CDS complement(656749..657243) /locus_tag="lmo0617" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0617" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464144.1" /db_xref="GeneID:985148" /translation="MKKLKSILLLMGIITFALALTACGGTEDKASTEKIETAKAETKK KSNPNELGDYKVEILSSEVVKDFEGNNAIAIKTKFTNNSKENISFMVAIDQQAFQNGT QLETTVSADASMGGSEKDVQPGGTLEVTELYKLQDTQNTVDIEATELISFSKNSVKKS FELK" misc_feature complement(656800..657159) /locus_tag="lmo0617" /note="Domain of unknown function (DUF5067); Region: DUF5067; pfam16729" /db_xref="CDD:435543" regulatory complement(657251..657256) /regulatory_class="ribosome_binding_site" regulatory complement(657290..657323) /regulatory_class="terminator" gene complement(657323..658465) /locus_tag="lmo0618" /db_xref="GeneID:984940" CDS complement(657323..658465) /locus_tag="lmo0618" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="protein kinase" /protein_id="NP_464145.1" /db_xref="GeneID:984940" /translation="MGEMTLAFIEEQYKELDNLNNKENPAVLTRNTSTGELFVRKIIP SSFAPVIEQLKNLSSKYLPKIEVMIPKGNQLIVYEEYINGKNLADLMKTNAPFDTDEV TRLMLMLSDALTELHANAIIHRDIKPSNIMISSDGVLKLIDFDASRMFEVGKNQDTVN LGTIGYAAPEQYGYSQTDARSDIYSIGVLMLELLLGKNTLPDKEHATSLEKIAMQAGA FDPEQRYQSIQDFRTAVKNDSLGPSYVSELSDFTELDDSPTESAWKTPADEYENDFIP WYKHIPGFRTGTPWKMIVAVFGYMFLIFGLFSPPTEGVKMSHTVNFFSNFFLIVPAFV IFTNLCGIWSKLPLLKSPSPGTRKAGIVIYIIVCVSIYGIYNEIFS" misc_feature complement(657755..>658306) /locus_tag="lmo0618" /note="Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; Region: STKc_PknB_like; cd14014" /db_xref="CDD:270916" misc_feature complement(order(657971..657982,658028..658030, 658079..658081,658085..658087,658091..658093, 658202..658204,658208..658210)) /locus_tag="lmo0618" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270916" misc_feature complement(order(657971..657994,658016..658042)) /locus_tag="lmo0618" /note="activation loop (A-loop); other site" /db_xref="CDD:270916" regulatory complement(658478..658483) /regulatory_class="ribosome_binding_site" regulatory 658559..658565 /regulatory_class="ribosome_binding_site" gene 658572..659027 /locus_tag="lmo0619" /db_xref="GeneID:984942" CDS 658572..659027 /locus_tag="lmo0619" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0619" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464146.1" /db_xref="GeneID:984942" /translation="MDGEKETSKLLHELKKATNLRQVLDENEAEFKSSEMVTYLKELL AEKKLTKASVIRAARLHETYGYQIFSGVRRPSRDRTIALSFGFKLSGLEASRLLKYTE YPPLYAKNRRDAIIIFALDHGYTLDQTNDSLYDLEEALIETYKEEKPLI" regulatory 659071..659076 /regulatory_class="ribosome_binding_site" gene 659083..659475 /locus_tag="lmo0620" /db_xref="GeneID:985155" CDS 659083..659475 /locus_tag="lmo0620" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0620" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464147.1" /db_xref="GeneID:985155" /translation="MLNEQTILQAATSEKNAGDFPKVVQSFKELGVTKYQFLVEKGVY VFWDEMDNQVESKLNGVSMPISEEISRDKLKDAIKQAQAGKIDFEIFIKLAGLAGVRL WEADLSAMKVTYIDNTGNDLVIEPIPSI" misc_feature 659083..659472 /locus_tag="lmo0620" /note="Prophage-encoded protein YbcV, DUF1398 family [Mobilome: prophages, transposons]; Region: YbcV; COG5562" /db_xref="CDD:444304" regulatory 659485..659501 /regulatory_class="terminator" regulatory 659557..659562 /regulatory_class="ribosome_binding_site" gene 659572..660312 /locus_tag="lmo0621" /db_xref="GeneID:985249" CDS 659572..660312 /locus_tag="lmo0621" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464148.1" /db_xref="GeneID:985249" /translation="MDIITYFLIALSTSVVGSFLGIGGGVILLPILLLMGVSQGTAAF SSALTVFTMAIFTCSIYYKRKQGNVGLALKIAVTSIPTTFIGAMVNQMLPEAVYRFLY GALIVVLLGIMIWKKKRNNEKPHFLSKYRIIPYVFGVIIGFLAGLFGIGGGPIVIPIL LLIFMLNQKTASATSSYVTLLTSLASIGSYAIIGGSDFSIGIYMIPGAIIGALIGTRL NKLLDEKWIAILFNVLLIALFALNLIKI" misc_feature 659572..660306 /locus_tag="lmo0621" /note="Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family [Inorganic ion transport and metabolism]; Region: TauE; COG0730" /db_xref="CDD:440494" regulatory 660320..660350 /regulatory_class="terminator" regulatory 660385..660390 /regulatory_class="ribosome_binding_site" gene 660398..660676 /locus_tag="lmo0622" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985471" CDS 660398..660676 /locus_tag="lmo0622" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464149.1" /db_xref="GeneID:985471" /translation="MKRSWPDFAAFLLTILTVTWIILTWGLHISDIVPGGEKGIWYKL IPLFLGIISTISVFFVKEKLVKWILLGFNILLLILIYFVYHIGEIGMF" regulatory 660678..660683 /regulatory_class="ribosome_binding_site" gene 660692..660958 /locus_tag="lmo0623" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984945" CDS 660692..660958 /locus_tag="lmo0623" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0623" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464150.1" /db_xref="GeneID:984945" /translation="MDEPTKAVIYQILSKTEEQNATMDHLVFEMMQFPGAAAFTKNEL LFGIYWLETYHYIFRMSENQTTRYYRTEKGHEKLAELELLKNKS" misc_feature 660692..660934 /locus_tag="lmo0623" /note="Protein of unknown function (DUF3116); Region: DUF3116; pfam11313" /db_xref="CDD:402765" regulatory complement(660952..660990) /regulatory_class="terminator" regulatory 660963..661001 /regulatory_class="terminator" gene complement(660996..661439) /locus_tag="lmo0624" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985292" CDS complement(660996..661439) /locus_tag="lmo0624" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464151.1" /db_xref="GeneID:985292" /translation="MTAFDLEDFLTTAITDYAKEKVEAGTWDEEESLAKSQDSFNKLL YDGITTPNEYLYSIISGEKIGYIWFHVDETRSGKHAFIYDFVIFEAFRGKGFGTKTLA ALDVLAKEMQITKIGLHVFAHNQTAIGLYNKVGFQNTDITMAKYL" misc_feature complement(661002..661247) /locus_tag="lmo0624" /note="Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]; Region: RimI; COG0456" /db_xref="CDD:440224" gene complement(661470..662171) /locus_tag="lmo0625" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985881" CDS complement(661470..662171) /locus_tag="lmo0625" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0625" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464152.1" /db_xref="GeneID:985881" /translation="MKKTIQSVGVWGDSIMKGVLFNPEKNRYTLLKNNCIKRASEKLG LTFQNHSTMGRTITKGHEILTKDLAKDATNDIAIIEFGGNDCDFNWAEVAENPAAEHI PRTPINIFETQLLEMIARLKKLDIKPILMTLPPLHAKRYFDFITRDGLNKDNILQFLG GDVEMIYRWQERYSNTISRIAAETSSQIIDVRDSFLAEFHYENLLCADGIHPNEAGHI AMSRRFIQYASFHKA" misc_feature complement(661491..662150) /locus_tag="lmo0625" /note="Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle control, cell division, chromosome partitioning, Lipid transport and metabolism]; Region: TesA; COG2755" /db_xref="CDD:442045" regulatory complement(662179..662184) /regulatory_class="ribosome_binding_site" regulatory complement(662209..662253) /regulatory_class="terminator" gene complement(662257..663936) /locus_tag="lmo0626" /db_xref="GeneID:985506" CDS complement(662257..663936) /locus_tag="lmo0626" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464153.1" /db_xref="GeneID:985506" /translation="MWKKHKWLIIAVLLLVIYVAPLFILGGNSHVRIHDNLDSNVTWY KMVLDSGDYTAKVGTANIDQIMDDSVPRDSFDSEFVGIDWLYMIFSTPIAFAMSQLIT RVFAFLGLFLWARDYLIKDKKYLVPIYFVSLAFALTPFWPSGMLSTLGMPLALWAFLN IRNNKRRIWNVVILTLLPFYSSLILGFCFFLVMVGCIWLYDVFKKKQVHIRFLLSMLY MGLIYVIVNYRFIYAMFLHPEPDSRSEFSLPNLSFLSSIRLSFKNFIFGHTHDQALAG YVILPILLLVLVLIIIKREWVKEKLFLWLFGFNLFLSFWYGFWWYRGWNVIKEHVEIM RTFNFSRFHFLQPFLFYGLFALAIVYLIKKGNWWRKLAYVAIVLQLIVVFANNSEIYY RTGNGSPSINQFYATEQMEEIKDYIGKPQSSYRVGSIGLHPSVSQESGFYTVDGYVNS YPLAYKRAFRKIIAGELDKSPVLEDYYDNWGNRCYIFSAELGKNYDFGKDSKKHIKQL DFNTEAFKKVGGEYVLSAVPIDNASEVGLQFEKAFDNKESYWKIYLYKATN" misc_feature complement(662266..663930) /locus_tag="lmo0626" /note="Protein of unknown function (DUF6044); Region: DUF6044; pfam19510" /db_xref="CDD:437342" regulatory complement(663943..663948) /regulatory_class="ribosome_binding_site" regulatory 664230..664235 /regulatory_class="ribosome_binding_site" gene 664242..668990 /locus_tag="lmo0627" /db_xref="GeneID:984956" CDS 664242..668990 /locus_tag="lmo0627" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="pepdidoglycan bound protein" /protein_id="NP_464154.1" /db_xref="GeneID:984956" /translation="MLKHNWQKVFVVMVAVALIFQLVPWSNIFAGAEENQTKTTQQIA QPDDQKVADENKTTVTPDNKETTKNLVNGKQLLKGSVDWNFTNKVTDANGNTKETYAP GDSLKFSVSLAIPSYSEAVLDETYTFWIQKDFFQGDKVTFVNPAIDGLTPRQNVFTDD SMKNSIGTKTINGVEYIGYTLKFNQSPEALAKYEDEPLTNAKFDMFATISTTITTKED YKAIVIEDDKDVDISNIEVPVTPPTPDTDNGVLTASKVIDSAWRLDKDTGKYVKVATS STNYTPEKDDLVFYYVYAMNNSGENAVLEKMIDELPAGFSIITEGSPEWQALSTASGS SLQRGWVASADQTNLAPGATRYELPFSPAQTISKNGGGIYRTIAAKVTDPTKDLTNVT KSPTKGGEGKSGSITPSGKDVYDMAITTKISSTYDKNNKYIGAVSSTTTPVSISEGST VGVTYTAINQGNYTKDVVVYAYVPAGYELNNDTSDFKTANDKWKYETTVPSGGGVWSD IKVYSITLSGGMASGATKTATMYMKAMGIPEDGTYSAVDFYMAGEIGSFSNFNGESTL DGAITDVDSTPDMNPGNDLISNVDGSTIKPIDGFQKEKPHVVKENAKSTATLQDEDDF DFDYVTFIKTPEVIPSEGKVFEKTRLSAADAEKTARNMIGNDIMGSALKDYTPLADDG RITSPKTYMVYEMNINPSGVEDTLNSSFTDTLPKGLKMLEYDIAGLNSSNKHIYGFTT NKFEGTPKFTNADGQDVIVYQKGLYSEKQVCIANPTLNDVGVRYFGNNADKMGVTGSV TKDARTLTLNFGQPAADPMYSETKAAYKVYMIVVIDPDEIDYSSIMQNKATYTYNDKV ITSYENSEMYWDAGGGTAYAKKYVLDNKTNAYLSGSQYNVATPDADGNLSVGYKIRVR SAYEFDKSSINIGDVIAADNFKSISNVEVNGYEASPNTGFQIDGELENPVPLTADKYA VEAKATANTLDITNPVDIPQMQLYNVLFKVNYQKVKYGAKLVNQAAGSEVATVVPLNL NLLKQDDISKTALTGYEFKAYYADENGKADLTKPVKDTNSNEIVMTDSSGAANFIPNG YKTTSKNQEWKVVLVETKTPTGYESNENKEYPVTVKSDANGNLSIPTSTETGLEITND DHGAATATIDNHADVKMIDVNGAKTWTGDTAADRPDSIEVQLLQDGVAYGSPITVTKA DDWKYEFKNVPETNADGNKYTYTVLENTVTNYTSAVTGLDINNTLIKPDIKMINLDGQ KTWKNDTENDRPASIEIQLQQNGQDYGFPVTVTKANNWKYEFKNLPETTNDGAAYNYT IVEKAVPGYETKVDGMDVINTKIDAPKTAVSGEKTWKNDTAKDRPDFIEVQLLQNGQT YGDPVKVTKENDWKYSFKDLPKADANNQDYRYSVAEIAVPGYKTTTDGMNLTNTKVTD EKNVTSASGTKTWVGDNEKTRPDSIEVQLLQNGKAYGTPIKVTAKSNWKYSFTNLPEK DKTGEKYSYTVSEKQVSGYSVKVKGMDLTNTKVTKTTPKDTPKDTHSTNKPSKTKKLP GTGDTNGMLLFAGGLALLFLGLHLRRKSAK" misc_feature 667731..667991 /locus_tag="lmo0627" /note="Repeat unit of collagen-binding protein domain B; Region: CollagenBindB; cd00222" /db_xref="CDD:212461" misc_feature order(667734..667736,667740..667742,667746..667748, 667812..667817,667863..667865,667869..667871, 667875..667877,667914..667916,667920..667922, 667926..667928,667935..667937,667950..667952, 667956..667961) /locus_tag="lmo0627" /note="domain interaction interfaces [polypeptide binding]; other site" /db_xref="CDD:212461" misc_feature 668010..668267 /locus_tag="lmo0627" /note="Repeat unit of collagen-binding protein domain B; Region: CollagenBindB; cd00222" /db_xref="CDD:212461" misc_feature order(668013..668015,668019..668021,668025..668027, 668091..668096,668142..668144,668148..668150, 668154..668156,668193..668195,668199..668201, 668205..668207,668214..668216,668229..668231, 668235..668240) /locus_tag="lmo0627" /note="domain interaction interfaces [polypeptide binding]; other site" /db_xref="CDD:212461" misc_feature 668289..668537 /locus_tag="lmo0627" /note="Cna protein B-type domain; Region: Cna_B; pfam05738" /db_xref="CDD:461726" misc_feature 668571..668816 /locus_tag="lmo0627" /note="Cna protein B-type domain; Region: Cna_B; pfam05738" /db_xref="CDD:461726" regulatory 669000..669034 /regulatory_class="terminator" regulatory 669072..669077 /regulatory_class="ribosome_binding_site" gene 669086..669361 /locus_tag="lmo0628" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984963" CDS 669086..669361 /locus_tag="lmo0628" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0628" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464155.1" /db_xref="GeneID:984963" /translation="MKEELLQAIEVGKPVLLVTAIGYIVGIVEAKGELIRLNDVYINC VSASRVNRFSRGLAVNINQVIGMQLLSKSEKDEMIGGWKAYVAPTAG" regulatory 669408..669413 /regulatory_class="ribosome_binding_site" gene 669423..669950 /locus_tag="lmo0629" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984966" CDS 669423..669950 /locus_tag="lmo0629" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0629" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464156.1" /db_xref="GeneID:984966" /translation="MILLVIDTQKLIMTNNLYNFDSLVPNIEQLIATARKNKIEIVYI RHDDGPNTELTEGKEGFDIYKKFQPTTHERIFDKTVNSAFKGTGLLEYLKEKGTKKIV VAGLQTDFCIDATVKCGFEHGFHMIVPAHANSTEDNHFMSGENSYKYYNEWMWPGRYA TCISMEETIKEMEHN" misc_feature 669429..669872 /locus_tag="lmo0629" /note="Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia; Region: nicotinamidase_related; cd01014" /db_xref="CDD:238496" misc_feature order(669441..669443,669654..669656,669753..669755) /locus_tag="lmo0629" /note="catalytic triad [active]" /db_xref="CDD:238496" misc_feature 669738..669743 /locus_tag="lmo0629" /note="conserved cis-peptide bond [active]" /db_xref="CDD:238496" regulatory 669939..669974 /regulatory_class="terminator" regulatory 670295..670300 /regulatory_class="ribosome_binding_site" gene 670309..672339 /locus_tag="lmo0630" /db_xref="GeneID:984967" CDS 670309..672339 /locus_tag="lmo0630" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional antiterminator BglG" /protein_id="NP_464157.1" /db_xref="GeneID:984967" /translation="MLSGRMVLIIKYLEGKSESSIRGISKKLEISERKVRYDIDNIND ALTLNQLKPILKEGKGRLVIPADLAKLALEEKETYIFAPQERINILQYLLFFNVKKVN LEHLSKWMNVSRTTIKKDLLLIEEQLQKLNLQLVYKQGYRLIGNENALLNERVRILRD YIDFIPSEDIETNFYRKCMLGEMKVSLKNIDINGVNKWSKQLLKQMGWILNDESYYWY LANILVFCWYIKNDVTNPLKDAKLVLPIFNSQLIQGMEVILDYELSQEQLNILVGFVF FTNKYASLNEEMDLITTETIVNSLITSMSEELNLPFLEDAILYKGLLNHVAPLIERVR GNVQIYEDTFDVIPTEFLYILQATSKVVKTIPLLESVENESEISLLAIHFLASIQRNQ REEKLHVLLVCGLGYGAIAMMKDTLNSEYQIAFVATIPEYMLKDFTAWEEVDLVITTA KVTTPLPKSTVKVSPVLKECDLVELEKQGLKKKNILTSYFAINKRLSFLDSTVKQQVI SVIKEELGYGHVSIPNRKLGLSDLIGIDAIQITSESLTWQTAIQRATKLLSDNHFVLP AYAENIKQIQEELGFYSVKDEEFALFHGNDSQLVQMNSMALLINEQPVMFGEKQAKVI FILASKDKKEQIPAIITLTKMTYQTDFISKLEQAKNPIDADRIIKKYEEEVR" misc_feature 670333..671850 /locus_tag="lmo0630" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" misc_feature 671902..672315 /locus_tag="lmo0630" /note="Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; Region: PTS_EIIA_2; pfam00359" /db_xref="CDD:459780" regulatory 672326..672331 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0630" gene 672341..672793 /locus_tag="lmo0631" /db_xref="GeneID:984965" CDS 672341..672793 /locus_tag="lmo0631" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIA" /protein_id="NP_464158.1" /db_xref="GeneID:984965" /translation="MGVKIDFLSISNINVNTKEDAILQLVNVLEKADYLADKSLFEQD ILERERTLSTYIGHEIGLPHAQSSGVKEPCVVVGKLSKPVKWTEEEEFVQIVFLIAVP RDNQNNLHLKVLSNLARLLMHEDFRTKLSKLDDIATVALLNKSVKEDN" misc_feature 672356..672772 /locus_tag="lmo0631" /note="Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) [Carbohydrate transport and metabolism, Signal transduction mechanisms]; Region: PtsN; COG1762" /db_xref="CDD:441368" regulatory 672780..672785 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0631" gene 672794..673855 /locus_tag="lmo0632" /db_xref="GeneID:984378" CDS 672794..673855 /locus_tag="lmo0632" /experiment="EXISTENCE:[PMID:19448609]" /note="FrwC with FrwB, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; forms translocation channel and contains the specific substrate-binding site" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIC" /protein_id="NP_464159.1" /db_xref="GeneID:984378" /translation="MRTLKFLQKHLMTATSYMIPFVVAGGILFALSVMLSGQAAVPDA GWLAKLNQIGAAGLALFIPILGGYIAFSMADKPGLAPGMIGAYLANEIGAGFIGGIIA GFLAGFVVIQLKKIKLAPSMRTLGSIFIYPLLGTLITGGIIVFLIGEPISGFMDWMTN ALNSLSGAAKVPLGALLGAMISFDMGGPVNKVAATFAQTQVDTLPYLMGGVGVAICVP PIGLGVATLLFPKKFTRVEKDSGIAALLMGSVGITEGAIPFATADPLRVIPSIMVGSI VGNVSAFLFGCLNHAPWGGLIVLPVVDNRIGYIASIALGAVVTAIMLRILKKDATELD EALEEGQDIDDLDINFEDI" misc_feature 672794..673852 /locus_tag="lmo0632" /note="PTS fructose transporter subunit EIIC; Region: PRK10478" /db_xref="CDD:182490" regulatory 673858..673863 /regulatory_class="ribosome_binding_site" gene 673870..674178 /locus_tag="lmo0633" /db_xref="GeneID:984968" CDS 673870..674178 /locus_tag="lmo0633" /experiment="EXISTENCE:[PMID:19448609]" /note="FrwB with FrwC, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell; cytoplasmic protein that interacts with complex EIIA; contains the second phosphorylation site of the PTS" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIB" /protein_id="NP_464160.1" /db_xref="GeneID:984968" /translation="MKIVAVTSCPSGVAHTYMSAESLELSAKKMGVTIKVETQGSSGI ENKLTAKEIEEADCVIITNDVEIRESQRFKGKKVVKMSVSEIIKKSDALIKKLQTMFE " misc_feature 673873..674157 /locus_tag="lmo0633" /note="Phosphotransferase system fructose-specific component IIB [Carbohydrate transport and metabolism]; Region: FrwB; COG1445" /db_xref="CDD:441054" regulatory 674190..674195 /regulatory_class="ribosome_binding_site" gene 674205..675473 /locus_tag="lmo0634" /db_xref="GeneID:987068" CDS 674205..675473 /locus_tag="lmo0634" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="tagatose 6-phosphate kinase" /protein_id="NP_464161.1" /db_xref="GeneID:987068" /translation="MKLPIKKAVEALLKLQTTGDSATLIGVGPMSRNLLQASFELAKE DDYPLMFIASRNQVDADELGGGYVNGWNQFSFIDAIKEVAKEVDFDGLYYVCRDHGGP WQRDQERNDHLPTEKAMELGKKSYIADIEAGFDLLMIDPTKDPFEVGKVIPLETVLER TVDLIAFCEEERKKRGLPEIGYEVGTEETNGGLTSTETYEKFITQLKVELEKRDLPLP TFIVGQTGTLTRKTEQVGHFNFKNAYDLAQMAKKYGVGLKEHNGDYLDDVTLLEHIPS EITATNVAPQYGTEETRAYLKLVELEQKLVENGLIKTPSNAREVLLIQSIKSERWRKW MLDGQKDITINEIMQDDDLSLEILDIAGHYTFNDAMVKKEINTLYANLAANNIDGKRF VIDHIKRPIRNYSECYNLKGATTRIKQLAK" misc_feature 674307..675416 /locus_tag="lmo0634" /note="D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ-like; Region: GatZ_KbaZ-like; cl09211" /db_xref="CDD:447696" misc_feature 674307..>674765 /locus_tag="lmo0634" /note="Tagatose-1,6-bisphosphate aldolase non-catalytic subunit AgaZ/GatZ [Carbohydrate transport and metabolism]; Region: GatZ; COG4573" /db_xref="CDD:443630" regulatory 675552..675557 /regulatory_class="ribosome_binding_site" gene 675563..676267 /locus_tag="lmo0635" /db_xref="GeneID:984974" CDS 675563..676267 /locus_tag="lmo0635" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0635" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464162.1" /db_xref="GeneID:984974" /translation="MINLIFDIDDTVYDQLKPFENAFKTVFGKADHLKIENLYIKSRF YSDEVYHRVVRGEMPKAEMHVYRITQALSDFDYQITKKEAETFQHAYEQNQRKIELSP GIKEILAWAKKNEITMGIITNGPKEHQQHKINDLQINDWIPAEHTFISGKVGIEKPDK KIFKLVEEQIGINSAETYYIGDSFENDVIGSKSAGWKSIWLNRRGHLRPTEAAFQPDY CVENEQQLFAILQEIF" misc_feature 675569..676252 /locus_tag="lmo0635" /note="FMN and 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB, HAD superfamily (riboflavin biosynthesis) [Coenzyme transport and metabolism]; Region: YigB; COG1011" /db_xref="CDD:440635" regulatory 676270..676303 /regulatory_class="terminator" regulatory 676359..676364 /regulatory_class="ribosome_binding_site" gene 676372..676788 /locus_tag="lmo0636" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984970" CDS 676372..676788 /locus_tag="lmo0636" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464163.1" /db_xref="GeneID:984970" /translation="MKFSKATNYALHTMVYLANLSPEKSVGVKELATKQNVSPTYLSK VLTMLVKAGFVESVTGVNGGYKLAEPASSISFLDVIQAIEGKGAFFHCDPKNHSESQP HCLIGEVMNKAEQQMEDYLSKQTVGSIVVEIEKHQH" misc_feature 676378..676761 /locus_tag="lmo0636" /note="Iron-dependent Transcriptional regulator; Region: Rrf2; pfam02082" /db_xref="CDD:396591" regulatory 676789..676794 /regulatory_class="ribosome_binding_site" gene 676802..677395 /locus_tag="lmo0637" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984971" CDS 676802..677395 /locus_tag="lmo0637" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464164.1" /db_xref="GeneID:984971" /translation="MKHHHNHHGEAGFKRKVDYLDRPERSEVLSPEDFLQAMPIGKTA SILDLGAGTGFLTIPAAKLVDNTVFALDLDAKMLELIESKAKEAGLANVETLEASMDD IPLEANSVDVVLASLVLHEADSLADVLREVSRVVKTGGYFASLEFDTKGTDLKGPPME IQISAEKLKEELAGFGFEVVKNWQLDEGMYVSIAVKK" misc_feature 676892..677335 /locus_tag="lmo0637" /note="Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Region: UbiE; COG2226" /db_xref="CDD:441828" regulatory 677405..677451 /regulatory_class="terminator" gene complement(677464..677553) /locus_tag="lmot11" /db_xref="GeneID:3167622" tRNA complement(677464..677553) /locus_tag="lmot11" /product="tRNA-Ser" /db_xref="GeneID:3167622" regulatory 678480..678485 /regulatory_class="ribosome_binding_site" gene 678494..679123 /locus_tag="lmo0638" /db_xref="GeneID:984973" CDS 678494..679123 /locus_tag="lmo0638" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0638" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464165.1" /db_xref="GeneID:984973" /translation="MKNKTTKKIICGGLATVLLSSSLVLPTTSLASTSKQKVQDYQQE ETFSDSPLTELDNLIAEKYITFDSPLKQYKVNPSIGSEMTTEKIEAVNKQVAETNNLL TLATNDSSTNVIAVTPEGKETVVKRGLLKGAGVNKVTYHWNYARIRLSKNTVRTMGVG LSIAGIWLPLKVVSKVCASLGVGTGFVKHGIWFDYNYFSNLLLTGYGWQ" regulatory 679749..679754 /regulatory_class="ribosome_binding_site" gene 679763..680296 /locus_tag="lmo0639" /db_xref="GeneID:984972" CDS 679763..680296 /locus_tag="lmo0639" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcripitonal regulator" /protein_id="NP_464166.1" /db_xref="GeneID:984972" /translation="MERKLVQEINLLENKKLVMNLNIVAIAIVLILTVLGIVFSGGFA ITNGFMGIIWLFGGYAVAIVIHEAVHGIFFKAFRPEAKVKFGFKNGMAYAGSPGAFYT RAQFFIISIAPFIVLTGLFIFLRFLGVNEAVLYLIFALHTSGCVGDFYYCILLINQPA GIVVEDTDKGISFYSEG" misc_feature 679940..680245 /locus_tag="lmo0639" /note="Putative zincin peptidase; Region: DUF3267; pfam11667" /db_xref="CDD:431992" regulatory 680346..680351 /regulatory_class="ribosome_binding_site" gene 680360..681277 /locus_tag="lmo0640" /db_xref="GeneID:987093" CDS 680360..681277 /locus_tag="lmo0640" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_464167.1" /db_xref="GeneID:987093" /translation="MKRITIGNSALTASEISLGCMRMADLSREDANKVINTALENGID FFDHADIYGGGKSEEVFADAIDMNATIREKMILQSKCGIRQGFFDFSKEHIIASVEGS LKRLKTDYLDTLLLHRPDTLFEPEEVAAAFTELEKSGKVRHFGVSNQNPGQIELLKKY VDQELIANQLQFSIMHTGMIDTGFNVNMTIDPSLDRDGGILEYSRLNNMTIQAWSPFQ YGFFEGVFLDNDKFPELNKTIDKIAADKGVTNSAIAVAWIQRHPASFQTVVGTMNPGR IADIAKASDVTLSREEWYEIYRAAGNQLP" misc_feature 680360..681274 /locus_tag="lmo0640" /note="Predicted oxidoreductase YdhF [General function prediction only]; Region: YdhF; COG4989" /db_xref="CDD:444013" regulatory 681288..681321 /regulatory_class="terminator" regulatory 681528..681533 /regulatory_class="ribosome_binding_site" gene 681543..683423 /locus_tag="lmo0641" /db_xref="GeneID:985323" CDS 681543..683423 /locus_tag="lmo0641" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="heavy metal-transporting ATPase" /protein_id="NP_464168.1" /db_xref="GeneID:985323" /translation="MKDWMKQNWQFITTGISGILIVIGCLVGSDVGDFWTAIIFLSAF VIGGFEQAKEGIQATIKTKKLNVELLMILAATGASIIGYWFEGAILIFIFSVSGALET YTTNKSKREITKLMAFQPERAFRLLSNGDLEEVAAKELQLDDMVFVRPGESVPIDGVI VRGSTTLNEAAINGESVPATKTVGADVFGGTVNVSSAITVKVTQTFENTIFSKIIRLV ETAQSEPSKTARFIERFEDVYVKAVLLFVLVMMFLPHFALGWSWNETFYRAMVLLTVA SPCALVASVTPATLAAISNGARHGILFKGGVHLENLRGVKAIAFDKTGTLTNGTPALT DRLFAENVDKQLVINVVGAMERQSLHPLAAAITQDLEPEITEKLTEIEVTDVPGWGVQ AIYREGNWQVGKAGFVGKEAAAAFSNGAFERLASEGKTIVYVAKDGVIQAMFALKDTC RPEAIRTIKALQAKGIKTIMVTGDNEQTGAAIQAELGMDYVVSGCLPEKKVDVLRELS VTYGSVAMVGDGINDAPALAHAAVGIAMGEGTDIAMETADVVLMKNDLEKIPYAYTLS ERLHWITWQNICFAIAVILVLITANVFQLINLPFGVVGHEGSTILVILNGLRLLRSNR KK" misc_feature 681570..683402 /locus_tag="lmo0641" /note="P-type heavy metal-transporting ATPase, similar to Bacillus subtilis ZosA/PfeT which transports copper, and perhaps zinc under oxidative stress, and perhaps ferrous iron; Region: P-type_ATPase_HM_ZosA_PfeT-like; cd07551" /db_xref="CDD:319849" misc_feature order(682371..682373,682377..682379,683289..683294, 683355..683357,683367..683369) /locus_tag="lmo0641" /note="putative HM ion binding site [ion binding]; other site" /db_xref="CDD:319849" misc_feature order(682503..682511,682698..682700,682746..682754, 682836..682838,682956..682964,683022..683024, 683031..683033,683040..683042,683097..683099, 683106..683108) /locus_tag="lmo0641" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:319849" regulatory 683506..683511 /regulatory_class="ribosome_binding_site" gene 683519..684247 /locus_tag="lmo0642" /db_xref="GeneID:984976" CDS 683519..684247 /locus_tag="lmo0642" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0642" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464169.1" /db_xref="GeneID:984976" /translation="MKKINWTQWIALFVFASMGISVVFTIYEIFTAPIKQPATGPHVT LRGDYIFLLFEIILGIFILLLPSIIARRFKFEIPGLVYILFIVFLYGSIYLGTVQKFY STVPHWDKILHTFSGAMLGAIGFSFVSLLNSNDKVVMKLKPGFIAVFAFCFAVTMGAF WEMYEYTFDGIMNLNMQRYNLSNGTPLTGRAALEDTMTDIIVDIIGALFIVIVGYFAL KKGRPWMERFEFKRKNWKKEPKKK" regulatory 684257..684289 /regulatory_class="terminator" regulatory 684375..684380 /regulatory_class="ribosome_binding_site" gene 684390..685040 /locus_tag="lmo0643" /db_xref="GeneID:984977" CDS 684390..685040 /locus_tag="lmo0643" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transaldolase" /protein_id="NP_464170.1" /db_xref="GeneID:984977" /translation="MFLDTGNLEEIKKALQFPFFEGVTTNPTILLKENRPRKTHIGSI QAKVVFVQAAGLTEEEIWEDVLRIQAIEPAEGTVIGLKIPAHEAGIKVIAKVRANFPN EIILATAIFSSEQGYIAALSGADYLAPYYNRMEVSGLDAAKTIEELRYVLDLQGLEDV KIMGASFKNSRQIMQALASGADTVTIGYDLFLQMMNKPLALESIEKFNEHHAALPK" misc_feature 684393..685016 /locus_tag="lmo0643" /note="A large family of domains similar to triose phosphate isomerase (TIM) which, in general, share an eight beta/alpha closed barrel structure; Region: TIM-like beta/alpha barrel domains; cl21457" /db_xref="CDD:473867" misc_feature 684771..684773 /locus_tag="lmo0643" /note="catalytic residue [active]" /db_xref="CDD:188634" regulatory complement(685039..685076) /regulatory_class="terminator" regulatory 685050..685087 /regulatory_class="terminator" gene complement(685083..686903) /locus_tag="lmo0644" /db_xref="GeneID:984979" CDS complement(685083..686903) /locus_tag="lmo0644" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464171.1" /db_xref="GeneID:984979" /translation="MILFYFLLIIGKFTFAYFQIFKDPNFLALGMDLLFIVLLLGLIH LFAPVRSHIYWYAGMSLFIGILMLVCVLYARFYNEVPTYHSFSLIGEVGVVKNSATSL LSGTDWLYILDIILLPFILYFNIKKGHEFPSFRLTSRVYGVSFISTLLILSGFTYFMM QQNIISDSKRAKRMGIFTFNISTALTGADHVKAADITAKNVNDIKGVSVKSNPDYFGA AKGKNLIIVQLESFQRNLTNVKINGQSITPTLDGLQNETMYSNQFFQTVSKSNTADAE WSVYTSTFPSGYYTNTQTYGDRVIPSMPRLLGKNDYKTATFHTNDASFYNRDEFYPAV GFDKFYDRKFFGDEDVIGFSPSDEVLYNKAFPILEEQYKNNQKFYAQLISVSSHMPFD IPKDKQEIDLPSDLKDTELGNYFEAVHYADKQLGEFIQKLKDSGIWDDSVVVFYGDHH IIKTDQLPEEQKKYVNRSTQLKAEPADDYRIPFFLHYPGMENPGEIKNVGGEIDIMPT VMNLLGIKTGDQIMFGTDILNSSNNYVPERYTMPEGSYFTNSYMYQPDESFETGAATN YDGTNKELSSDVKKRFDASRKLLQYSDSYVNNLPLRNEDK" misc_feature complement(685098..686771) /locus_tag="lmo0644" /note="Phosphoglycerol transferase MdoB/OpgB, AlkP superfamily [Cell wall/membrane/envelope biogenesis]; Region: MdoB; COG1368" /db_xref="CDD:440979" regulatory complement(686911..686916) /regulatory_class="ribosome_binding_site" regulatory 687124..687129 /regulatory_class="ribosome_binding_site" gene 687138..688529 /locus_tag="lmo0645" /db_xref="GeneID:984978" CDS 687138..688529 /locus_tag="lmo0645" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid transporter" /protein_id="NP_464172.1" /db_xref="GeneID:984978" /translation="MNSLFRRKPIEDLMHNKSGSTHLKQTLGPLDLTLLGVGAIVGTG IFILPGTVAAKNAGPAIIFSFVIAAIVCAIAAMCYSEFASSVPVAGSAYTYGYVVFGE LIGWLLGWALILEYGLAVASVASGWSSYLNALLSGFHISIPEAISGPFNPEVGTFINL PAIIIVLVIAFLLTLGIKESTRVNTIMVVIKVGVILLFLVVGVFYVKPDNWQPFMPFG ISGVMNGAALVFFAYLGFDAVSSAAEEVKDPQRTMPIGIIGSLLICTVLYVAVSAVLT GMVPYTDLNVTDPVAYALQVINQDWVAGIVSLGAVVGMITVILVMSYGATRLIFAMGR DGLLPKVLAEINQKYQTPVKNTWIFAVIVAIISGLVPLDRLAELVNIGTLLAFMMVSI GIIFLRKNKDIQARGFKVPLYPVLPIVSFLLCAFLISRLSVHTWILCGIWFVIGLIVY FAYGRKHSELLKK" misc_feature 687204..688496 /locus_tag="lmo0645" /note="amino acid transporter; Region: 2A0306; TIGR00909" /db_xref="CDD:129987" regulatory 688569..688621 /regulatory_class="terminator" regulatory 688604..688609 /regulatory_class="ribosome_binding_site" gene 688619..689458 /locus_tag="lmo0646" /db_xref="GeneID:984982" CDS 688619..689458 /locus_tag="lmo0646" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464173.1" /db_xref="GeneID:984982" /translation="MAEISEELRLGEVVLNVGHLKEMAGFYQEVIGLKLLEENERMVR LGVSGSDEALLVLKKIDNAVVPEVPRIGLFHTAFLLPTRESLADVLLHLAKSGYPIDG AGDHAYSEALYLHDIEGNGIEIYADRPKAEWMRDSDGNLPMVTEQVDVDSLLQIATDE PFTGMPNGTIIGHVHLQVADADKAEQFYKEALGMKLTTAIPSARFFAAGDYHHHIGSN VWAGRNLELLQENETGLAWFTIITPDKDAIITTLEEQGYDVKRFESTISVTDSNGIKI HFK" misc_feature 688640..689017 /locus_tag="lmo0646" /note="vicinal oxygen chelate (VOC) family; Region: VOC; cl14632" /db_xref="CDD:472697" misc_feature 689132..689452 /locus_tag="lmo0646" /note="C-terminal of Bacillus subtilis CatE like protein, a vicinal oxygen chelate subfamily; Region: VOC_BsCatE_like_C; cd16359" /db_xref="CDD:319966" regulatory complement(689453..689497) /regulatory_class="terminator" gene complement(689541..689825) /locus_tag="lmo0647" /db_xref="GeneID:985414" CDS complement(689541..689825) /locus_tag="lmo0647" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0647" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464174.1" /db_xref="GeneID:985414" /translation="MEFMSMIVTGIVLAAIISGLSFVVGKLSGLSWFWIAFCANSGFF IIFITVQNSFPDNAAVALSYLNLGIGVVLIALTLFQSSNWLFKKTMQRKH" regulatory complement(689833..689838) /regulatory_class="ribosome_binding_site" regulatory 689909..689914 /regulatory_class="ribosome_binding_site" gene 689923..690873 /locus_tag="lmo0648" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987051" CDS 689923..690873 /locus_tag="lmo0648" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464175.1" /db_xref="GeneID:987051" /translation="MIEFFKTTNEKMEQLSALEDGCWVKVTAPTDDEIEMLSKEMDVP KPYILDALDSEERSRIELKRAEQDVRHSLVIVDYPYESEDELGYAMYETLPIGIVLTR KHLVTITLRDLPILKDVQSMKLEEYDTTNHKQFLLKLLYAVSYYYLKYLNQIIKQTNN LEIQIKQSMKNEQLYAFMAVQKSLVFFATALQSNKAILDKMEDVEHFMQQEDNHDLLR DVIIENKQAIAMTDTYTQIISGMSDVFSSVISNNLNIVMKFLTSFTIILSLPTIVASI YGMNIKLPFMHNEHAFALILLFTLLITTGVTVIFWRRKYF" misc_feature 689989..690870 /locus_tag="lmo0648" /note="uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family; Region: EcCorA_ZntB-like_u2; cd12827" /db_xref="CDD:213361" misc_feature order(689995..689997,690094..690096,690145..690147, 690151..690153,690205..690207,690247..690258, 690262..690267,690349..690351,690358..690360, 690505..690510,690517..690519,690583..690585) /locus_tag="lmo0648" /note="Cl binding site [ion binding]; other site" /db_xref="CDD:213361" misc_feature order(690058..690060,690067..690072,690097..690099, 690103..690105,690274..690276,690286..690288, 690322..690324,690331..690333,690343..690345, 690355..690357,690364..690369,690376..690378, 690385..690390,690394..690399,690406..690408, 690442..690447,690451..690456,690463..690468, 690475..690480,690484..690489,690499..690501, 690505..690510,690517..690522,690529..690534, 690565..690570,690574..690579,690586..690591, 690595..690600,690607..690612,690616..690621, 690625..690633,690640..690663,690667..690705, 690709..690717,690721..690738,690742..690765, 690796..690801,690808..690813,690850..690852, 690859..690861) /locus_tag="lmo0648" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:213361" regulatory 690884..690889 /regulatory_class="ribosome_binding_site" gene 690897..691538 /locus_tag="lmo0649" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986557" CDS 690897..691538 /locus_tag="lmo0649" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464176.1" /db_xref="GeneID:986557" /translation="MEKQTYEKLAYYTIKEKILSGKLHVGQHISEAGIAKELSISRTP VRKAIAVLVSEELIEYELNRGAIVIESSMSAGRFIELLEMAEILVVQTIEKCKNKNLT YKPEQGNALLEEMREIQKEEDVEAYLSLLSKWLLQFVAQLANSYAEDIVRKMKRDFFN KAQKDIKIIPVLLEEETMETLEQLTYYMVEKKHDLAKEVIQKLVNLYIIRTFR" misc_feature 690924..>691364 /locus_tag="lmo0649" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: GntR; COG1802" /db_xref="CDD:441407" regulatory 691567..691572 /regulatory_class="ribosome_binding_site" gene 691581..694271 /locus_tag="lmo0650" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984986" CDS 691581..694271 /locus_tag="lmo0650" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464177.1" /db_xref="GeneID:984986" /translation="MRKVYEIFILDWRRLFKAPLALLLVIALIILPSLYAWFNIEALW DPYSNTSGIKVAVSIDDEGAEIDVPGKKPQQVNVGNQLKKTLEKNKKLGWTFVSEDEA KKGVKSGKYYASIHIPKDFSEDMVSVVNDNVTKPTIDYSVNEKINAIAPKMTESGATT IVNQISSEFVGTVSKAVLEEFNKAGIDLENELPTIRRLKTKVFQVQDALPELKKMGAE AVKIEAKLPELKAKANQVVELNEKIPELNKATENVLLVEQQLPKIDQLGQDILVLQKK IPEIKQIAESVKEVDENFGTIKKTVNDAVNESGKALDVIDTAMAAIPTVEKIAQNGSG YVDKVSDFADEINKSFDTLAPAIKQNLTLMKQMADNIYQVTEAIKNGSITPEQAITEL KKMEQDIDSLQQMITKQTATLESLNETLPNKPFTDLIANLKTINSQLGAQKETITKVR TELENGAQPSEELLNQLNEQAKNVSEKLDQILANYDSEIVPAIKVGLNQIQGDLKDSQ KLLETLQAKIPEITQVLKDSRETLQTGQTYLEEFQERLPEIQKTLDEATKVINTKLDT IIAGINEAANFYQNDYPNVKANIKKAANFIRDDLPGLEKEINQASGLIQEKMPEFEKA IKIAADLSREELPEFEKAINNAANKITDFDKNYDLQSIIKMLRNDADKDSSFIASPVK LKETSYYPIPNYGSASSPFYTALCLWVGALLLISLLRVDVEVPAGIFSHYHRYFGRLL TFLSIGLMQALIVTLGNIFLLGVSIAEPLLHVLFSMFISVVFMTIVYTLVSLFNNVGK GIAIILLVLQISGAGGNFPIQVSPPFFQAIYPFLPFTYAVSLIRESVGGLYMPTVWID MSVLAGFAILFITLGILLKKPLDKVVPKLSEKAKRSKLIH" misc_feature 691602..>692111 /locus_tag="lmo0650" /note="Uncharacterized membrane protein YhgE, phage infection protein (PIP) family [Function unknown]; Region: YhgE; COG1511" /db_xref="CDD:441120" misc_feature 692244..693428 /locus_tag="lmo0650" /note="Septation ring formation regulator, EzrA; Region: EzrA; pfam06160" /db_xref="CDD:428797" misc_feature 693600..694220 /locus_tag="lmo0650" /note="YhgE/Pip C-terminal domain; Region: pip_yhgE_Cterm; TIGR03062" /db_xref="CDD:274414" regulatory 694303..694308 /regulatory_class="ribosome_binding_site" gene 694317..694964 /locus_tag="lmo0651" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984985" CDS 694317..694964 /locus_tag="lmo0651" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464178.1" /db_xref="GeneID:984985" /translation="MANKFKTLDKMVYNLLLEKIKNGELVPNEHLAEEKLAREFGVSR SPLRKAIATLTAQGIVSYHENSGAVLNDCIVDADRYVQLMETIEIFVDAAIAKAAHFG YEMDLEKLYARMQEMERFSYLTDLENYFDAHHRFILCLISFAENPYQVRIVKQIFFQM VHFSDGINMFKSVEIREWTNKKSNQIYELLAEGKIELARKTIKSMFAELTIQAYR" misc_feature 694332..694922 /locus_tag="lmo0651" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: GntR; COG1802" /db_xref="CDD:441407" regulatory 694969..694999 /regulatory_class="terminator" gene complement(694973..695509) /locus_tag="lmo0652" /db_xref="GeneID:984987" CDS complement(694973..695509) /locus_tag="lmo0652" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464179.1" /db_xref="GeneID:984987" /translation="MNQNKITAGGLEFLVRFALPTDRLKINGLMMDTARWLKESGSTQ WSDILHGFDVHNIEQRIELGEVALFETEAGKLAGTMIIRKTPSDWDTDLWDNLAIDKA YYLHRIMVSREFSGISLSKQMIYFAEKLGIEMSVPFIRLDCIESNKTLNQMYLRYGFQ FLGTKNGFHLYQKKLPQK" misc_feature complement(695030..695341) /locus_tag="lmo0652" /note="N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2) [Transcription, General function prediction only]; Region: PhnO; COG0454" /db_xref="CDD:440222" gene complement(695496..696416) /locus_tag="lmo0653" /db_xref="GeneID:985279" CDS complement(695496..696416) /locus_tag="lmo0653" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0653" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464180.1" /db_xref="GeneID:985279" /translation="MTISQVKQTAKESLRGNWGIAIGIFVLAWLIETVGGGVLGWIPV VGWIALFLLTGPLYTGVAWVYLAISRREQPDVAYMFSGFKQFGRTFLAYLLISIFTFL WSLLLIVPGIIKTYSYSQTFFILRDNPNISALDAITESRHMMNGHKGRLFGLSLTFLL WYLIPLAVAIAGTVIVAGGMATTSYTADPAEVISALAAGATFGGLVLILASWLITLGI SLYVYPYLITSIAVFYDDLYAATEGTFTEETVIVEEEVNPFGATEADPFAEDTHPEGF GPDAAKEPETPVVPEAPETPEAPKDNNEPK" misc_feature complement(695706..696416) /locus_tag="lmo0653" /note="Uncharacterized membrane protein [Function unknown]; Region: COG5523" /db_xref="CDD:444274" regulatory complement(696427..696432) /regulatory_class="ribosome_binding_site" regulatory 696592..696597 /regulatory_class="ribosome_binding_site" gene 696606..696815 /locus_tag="lmo0654" /db_xref="GeneID:984989" CDS 696606..696815 /locus_tag="lmo0654" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0654" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464181.1" /db_xref="GeneID:984989" /translation="MAHENLRELEDQLIELRQTYQEVISETREFEDPQLQNGPINAAE VRLSALRHEIAEVEKKIKKAESKTE" regulatory 696870..696875 /regulatory_class="ribosome_binding_site" gene 696883..697590 /locus_tag="lmo0655" /db_xref="GeneID:984992" CDS 696883..697590 /locus_tag="lmo0655" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoprotein phosphatase" /protein_id="NP_464182.1" /db_xref="GeneID:984992" /translation="MKPIFAVGDVHGEITLLDELLENWDKERERLLFVGDLIDRGENP AAVLRRVKALADQTGAIVLKGNHEQMLLDFLENPSGKMHYYLSQGGMETIQSLIADSL DKKMTPEGLAKRVKEEASELIDFIRKLPLYYEEGKYVFVHAGVDLTKKDWHDTEERDF FWIREPFLFGQNKTGKVFIFGHTPVQNLHIDESSGIWVSEDKTRLDIDGGAVFGGELH GVVVEEKVITKSFSVKK" misc_feature 696898..697539 /locus_tag="lmo0655" /note="phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain; Region: MPP_PPP_family; cd00144" /db_xref="CDD:277316" misc_feature order(696907..696909,696913..696915,696988..696990, 697000..697002,697078..697083,697306..697308, 697336..697338,697426..697428) /locus_tag="lmo0655" /note="active site" /db_xref="CDD:277316" misc_feature order(696907..696909,696913..696915,696988..696990, 697078..697080,697306..697308,697426..697428) /locus_tag="lmo0655" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:277316" regulatory complement(697577..697628) /regulatory_class="terminator" regulatory 697591..697638 /regulatory_class="terminator" gene complement(697634..698197) /locus_tag="lmo0656" /db_xref="GeneID:985077" CDS complement(697634..698197) /locus_tag="lmo0656" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464183.1" /db_xref="GeneID:985077" /translation="MEQNKEKLTKPTSEKNYFWPIMIISFVAVVVILLLFFSPIGYQG AVHFDITIFPRMNAIFNSFTFVFLVIALWAIIKKKNIKMHRGFILAAFTSTLFFLVSY LTFHYLSAETSTFGGTGIIRPIYFFILITHSFLAAIVVPLALFALVWGWTMQIEKHKK IVRWTMPIWLYVSLTGVLVYLFMAPYY" misc_feature complement(697637..698170) /locus_tag="lmo0656" /note="Predicted membrane metallochaperone YozB (3H, Sco1 fusion), DUF420 family [General function prediction only]; Region: YozB; COG2322" /db_xref="CDD:441896" regulatory complement(698209..698214) /regulatory_class="ribosome_binding_site" regulatory 698305..698310 /regulatory_class="ribosome_binding_site" gene 698317..698733 /locus_tag="lmo0657" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985003" CDS 698317..698733 /locus_tag="lmo0657" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0657" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464184.1" /db_xref="GeneID:985003" /translation="MSIIARELTKAEEAEIIRLKEEGEVMLQTDGTPEERIEKITEYL KNTSPDPDLAEELGYILGSLYGEAVREKYGWRWLFVSENDLEGYAVTSKEHGYTFMVH DYFMQVIVQNKPDNSKMLFELMVDMTGNRNDFRMIG" regulatory 698770..698775 /regulatory_class="ribosome_binding_site" gene 698785..699420 /locus_tag="lmo0658" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985006" CDS 698785..699420 /locus_tag="lmo0658" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464185.1" /db_xref="GeneID:985006" /translation="MNVDEQKVRVLNNLVEHYGYQDWWEADNRLADWLSMILIQRTIE KNAKQALANLGPHLDLESLIGMDMATLEEYIYPAGFYKQKSIYIKALIKWFHGHGASL DKFQTYSTEDLRKELLGIKGVGEETADAMLLYIFERNVFIADLYARRLFSRLGFGEYK TYEQMREEFMPITENIPHKLCKEWHSVIDVHGKHFGKDKAMDESWLLEFSN" misc_feature 698785..699408 /locus_tag="lmo0658" /note="3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily [Replication, recombination and repair]; Region: HP0602; COG2231" /db_xref="CDD:441832" gene complement(699410..700306) /locus_tag="lmo0659" /db_xref="GeneID:984988" CDS complement(699410..700306) /locus_tag="lmo0659" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464186.1" /db_xref="GeneID:984988" /translation="MIGYGKTVRDIRTSKGIHQKDLYDNIISKSFAIEFEKGKHDITL SLFEKILKRMNMDLDEFFYIHRELSKSAEKNYLCMNQERGNIYDLESLELLYSELSKH DGELVEVWKAFVRSRIKMVEHLLKYHEFTVDVITAKDKCTIQKYLFSIDTWTLEELKI CANSIYFFEEDLQIQFLNQVIKAIQPYKNYDRARRVLCTLLINTIEVFISRSQLSSAS KLLILLDSLCIYNESAFYRNISNFLKGLLKMQSNQIKEGYAQAKKAIQLMNDLHFEEI AYLYEILLDQFIQLEGIDILNY" misc_feature complement(700124..700294) /locus_tag="lmo0659" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cd00093" /db_xref="CDD:238045" misc_feature complement(order(700196..700198,700268..700270, 700280..700282)) /locus_tag="lmo0659" /note="non-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" misc_feature complement(order(700199..700201,700271..700273)) /locus_tag="lmo0659" /note="salt bridge [active]" /db_xref="CDD:238045" misc_feature complement(order(700193..700198,700208..700210, 700217..700219,700247..700252)) /locus_tag="lmo0659" /note="sequence-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" misc_feature complement(699446..700045) /locus_tag="lmo0659" /note="transcriptional activator, Rgg/GadR/MutR family, C-terminal domain; Region: RGG_Cterm; TIGR01716" /db_xref="CDD:273772" regulatory 699497..699528 /regulatory_class="terminator" regulatory complement(700314..700319) /regulatory_class="ribosome_binding_site" regulatory 700524..700529 /regulatory_class="ribosome_binding_site" gene 700537..700821 /locus_tag="lmo0660" /db_xref="GeneID:985017" CDS 700537..700821 /locus_tag="lmo0660" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_464187.1" /db_xref="GeneID:985017" /translation="MAKAKYEENFKKSLVALYRRGKTKHSICQEFNVPHSTFGKWIKK FNNEENIESNEILNILQAQELKKQRVLLEEELSILTEAIAVFENPLPKNK" misc_feature 700579..700671 /locus_tag="lmo0660" /note="Homeodomain-like domain; Region: HTH_23; pfam13384" /db_xref="CDD:433164" regulatory complement(700834..700864) /regulatory_class="terminator" regulatory 700845..700864 /regulatory_class="terminator" gene complement(700876..701184) /locus_tag="lmo0661" /db_xref="GeneID:984999" CDS complement(700876..701184) /locus_tag="lmo0661" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464188.1" /db_xref="GeneID:984999" /translation="MKVSKSFEVFAKEAPEVHSAWMETVHKLDAASKLDKKTEELAYI AVMAATRLESGLPFHVKMAKSNGATRDEIISAILVGLPAVGNTVISALPIALDAFDEE " misc_feature complement(700882..701181) /locus_tag="lmo0661" /note="Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family [General function prediction only]; Region: YurZ; COG0599" /db_xref="CDD:440364" regulatory complement(701193..701198) /regulatory_class="ribosome_binding_site" regulatory complement(701209..701238) /regulatory_class="terminator" gene complement(701247..702062) /gene="thiD" /locus_tag="lmo0662" /db_xref="GeneID:985000" CDS complement(701247..702062) /gene="thiD" /locus_tag="lmo0662" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphomethylpyrimidine kinase" /protein_id="NP_464189.1" /db_xref="GeneID:985000" /translation="MTIKKTLTIAGSDSSGGAGLQADLKTFEEYGTYGFSAITTIVTM DPDNNWAHGVTPIDAQLVREQLKTILSGGPVDAMKTGMLGSIEIIKATREAIDKYDLK NVVIDPVMVCKGEDELIQPENAEAIRDLLLPKATITTPNLFEAGQLSGLGKLTTLDDM KAAAKKIIELGAKYVVIKGGKALESDKAIDLLYDGKEFTIYEVEKISPSHNHGAGCTF AAAITAGLAKGLTVEEAVAKAKDFVTAAIKGGFALNEFIGPVWHGAYNKAENR" misc_feature complement(701262..702056) /gene="thiD" /locus_tag="lmo0662" /note="ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase; Region: ribokinase_pfkB_like; cl00192" /db_xref="CDD:469648" misc_feature complement(order(701856..701861,701871..701873, 701880..701882,701889..701894,701898..701900, 701904..701909,701928..701942,701949..701951, 701955..701972,701979..701981,701988..701993, 702000..702002,702012..702014,702018..702023, 702027..702029,702048..702050)) /gene="thiD" /locus_tag="lmo0662" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238574" misc_feature complement(order(701415..701417,701817..701819, 701931..701933,701994..701996,702030..702032)) /gene="thiD" /locus_tag="lmo0662" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238574" misc_feature complement(order(701418..701420,701424..701426, 701529..701531,701631..701633,701742..701744)) /gene="thiD" /locus_tag="lmo0662" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:238574" regulatory complement(702071..702076) /regulatory_class="ribosome_binding_site" gene complement(702088..702954) /locus_tag="lmo0663" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985001" CDS complement(702088..702954) /locus_tag="lmo0663" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464190.1" /db_xref="GeneID:985001" /translation="MIKVIASDMDGTLLNSDIEIAQENVEAIEKARAKGIHFVLCTGR MYDDAMGLINKANLYAPAICMNGAEIRDEHGKIILQHPIDRNLARNTYNTLTELGMYT EFFTDMGPITTDKARGKEFMIEMHKRIHPDVPAETIMDKVEERFESKDVHEIPDVERI LGNKDLTILKFISFSSDKDILAKAKQKLEKDSELSVTSSFSDNIEITHREAQKGISLQ YYVEKLGVTLDETFAIGDNMNDISMLKMAGYSVAMGNGEEEVKDLAEHVTLSNDEHGV AAAIYKMLETND" misc_feature complement(702115..702945) /locus_tag="lmo0663" /note="Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; Region: Cof-subfamily; TIGR00099" /db_xref="CDD:272905" regulatory complement(702966..702971) /regulatory_class="ribosome_binding_site" regulatory 703115..703120 /regulatory_class="ribosome_binding_site" gene 703128..703691 /locus_tag="lmo0664" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987123" CDS 703128..703691 /locus_tag="lmo0664" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acetyl transferase" /protein_id="NP_464191.1" /db_xref="GeneID:987123" /translation="MKTELEKMIAGEMYDPSDRELAHGRNRARKFCREINDAMDSESR ASVLKRLFGGTKENVYVEPDFRVDYGSNIYVGENFYANFDCVILDVCEVHIGDNCMMA PGVHIYTATHPLDPVERNSGLELGKPVEIGDNVWIGGRAIINPGVKLGNNVVVASGAV VTKSFPDNVVVAGNPARVIKTIEVEEK" misc_feature 703128..703673 /locus_tag="lmo0664" /note="Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes...; Region: LbetaH; cl00160" /db_xref="CDD:469633" misc_feature order(703173..703175,703200..703202,703329..703331, 703365..703367,703371..703373,703389..703391, 703395..703397,703425..703427,703431..703433, 703449..703451,703455..703457,703461..703463, 703467..703469,703488..703493,703497..703499, 703533..703535,703539..703544,703557..703559, 703593..703598,703605..703607,703611..703616, 703641..703652,703656..703658) /locus_tag="lmo0664" /note="active site" /db_xref="CDD:100047" misc_feature order(703173..703175,703200..703202,703329..703331, 703365..703367,703371..703373,703389..703391, 703395..703397,703425..703427,703455..703457, 703461..703463,703488..703493,703497..703499) /locus_tag="lmo0664" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100047" misc_feature order(703203..703205,703212..703214,703224..703226, 703239..703241,703317..703319,703323..703328, 703374..703379,703419..703421,703425..703427, 703437..703439,703443..703445,703449..703451, 703461..703463,703467..703475,703479..703484, 703500..703502,703506..703508,703527..703529, 703533..703535,703542..703550,703557..703559, 703581..703583,703587..703589,703596..703601, 703611..703613,703647..703649) /locus_tag="lmo0664" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:100047" misc_feature order(703449..703451,703455..703457,703461..703463, 703467..703469,703533..703535,703539..703544, 703557..703559,703593..703598,703611..703616, 703641..703646,703650..703652) /locus_tag="lmo0664" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:100047" regulatory 703675..703680 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0664" gene 703688..703951 /locus_tag="lmo0665" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985007" CDS 703688..703951 /locus_tag="lmo0665" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0665" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464192.1" /db_xref="GeneID:985007" /translation="MIISDSKIFEQMENELAKAKAATTKASQDKHLHGLMLLVQLAKT GDETTAAVEPIAIQPTEPAQIASMDGKKIELEDGANGDSLLDF" misc_feature 703688..703948 /locus_tag="lmo0665" /note="Family of unknown function (DUF5327); Region: DUF5327; pfam17261" /db_xref="CDD:435819" regulatory 703950..703955 /regulatory_class="ribosome_binding_site" gene 703961..704338 /locus_tag="lmo0666" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987139" CDS 703961..704338 /locus_tag="lmo0666" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464193.1" /db_xref="GeneID:987139" /translation="MKKTIITGAIFAGLAVLLGAFGAHALKDVLGSYASTWETGVQYQ MFHAGGILVIGLLMEKQASRLYTWAAILFATGIVFFSGSLYVLSISKVSILGAITPIG GVCFVVGWFLLILGVSRRTMSRY" misc_feature 703961..704320 /locus_tag="lmo0666" /note="Uncharacterized membrane protein YgdD, TMEM256/DUF423 family [Function unknown]; Region: YgdD; COG2363" /db_xref="CDD:441930" regulatory 704346..704396 /regulatory_class="terminator" regulatory 704436..704441 /regulatory_class="ribosome_binding_site" gene 704452..705387 /locus_tag="lmo0667" /db_xref="GeneID:985013" CDS 704452..705387 /locus_tag="lmo0667" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_464194.1" /db_xref="GeneID:985013" /translation="MTYALEIKGLRKIYSTGVEALRGVDLTVEEGDFYALLGPNGAGK STTIGIITSLVNKTSGQVSVFGYDLDTDIVRAKQQIGLVPQEFNFNPFETVQQIVVNQ AGYYGVSRKEAIKRSEKYLKQSNLWEKRSERARMLSGGMKRRLMIARALMHEPKLLIL DEPTAGVDIELRREMWTFLRELNESGTTIILTTHYLEEAEMLCRNIGIIQSGELIENT SMKSLLSKLQFETFIFDLEPYEEAFEITGYNHVFEDKQTLSVEVERNQGVNHIFEQLS EHGIKVLSMRNKSNRLEELFLKITEEKHQVGEKHV" misc_feature 704464..705132 /locus_tag="lmo0667" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" regulatory 705365..705371 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0667" gene 705380..706150 /locus_tag="lmo0668" /db_xref="GeneID:987144" CDS 705380..706150 /locus_tag="lmo0668" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_464195.1" /db_xref="GeneID:987144" /translation="MFNLYYTALKSLAAKETNRYMRIWVQTLVPPVITTSLYFIIFGK MIGSRIGDMNGFSYMEYIVPGLIMMSVITSSYANVSSSFFSQKFQKNIEEILVAPVPT HIIIWGFLIGGIGRSVLVGALVTLISMVFVPIHIHSWTIGIITFLMTAILFSLAGLIN GIFARSFDDVSIVPTFVLQPLTYLGGVFYAISMLPPIWQAISKVNPIVYMISGFRYGF LGVTDVPVVISLSILVVFSVVLYSICWYLISKGRGLRS" misc_feature 705380..706147 /locus_tag="lmo0668" /note="inner membrane transport permease; Provisional; Region: PRK15066" /db_xref="CDD:237896" regulatory 706169..706199 /regulatory_class="terminator" regulatory 706398..706403 /regulatory_class="ribosome_binding_site" gene 706408..707292 /locus_tag="lmo0669" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987147" CDS 706408..707292 /locus_tag="lmo0669" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_464196.1" /db_xref="GeneID:987147" /translation="MMNKENPLNKYHTGKFEKQRQDYPGLQSKMTPVPDTGESSYQGA NKLTGKKAFVTGGDSGIGRAAVIAYAREGADVAINYHPDEEVDAQEVKAIVEEAGQKC VLLPGDLRKEGLAKDLVKKAYNELGGLDILVLNAGLQQYQLDIQKLPAEQLRDTFEVN VFSVVFAIQEALNYLKAGASIILTSSIQGVKPSAHLVDYAMTKSSLISLTKSLAAQLG EKGIRINAVAPGPIWTALQISGGQPQDSIPEFGQDQPLGRAGQPAELASAYVLLASDE ASYTTGQVYGITGGAPIN" misc_feature 706420..707277 /locus_tag="lmo0669" /note="SDR family oxidoreductase; Region: PRK07985" /db_xref="CDD:181188" regulatory 707295..707300 /regulatory_class="ribosome_binding_site" gene 707310..707486 /locus_tag="lmo0670" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985009" CDS 707310..707486 /locus_tag="lmo0670" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0670" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464197.1" /db_xref="GeneID:985009" /translation="MPWTKNDYPDSWKNLKKTEREKAIEIGNALLKDGYSESRAIPIA TSKAEEWYKNHKES" misc_feature 707310..>707483 /locus_tag="lmo0670" /note="Uncharacterized protein conserved in bacteria (DUF2188); Region: DUF2188; cl23970" /db_xref="CDD:474116" regulatory 707598..707603 /regulatory_class="ribosome_binding_site" gene 707612..708220 /locus_tag="lmo0671" /db_xref="GeneID:985011" CDS 707612..708220 /locus_tag="lmo0671" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0671" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464198.1" /db_xref="GeneID:985011" /translation="MNKRRWIFSTVVTAFLLIIGGFLVYQQMIPKPFTEVVAEAKIDG YESGDELENASTVIVTGQLEKRGDSIIERASDDAVIGVYRMSTFKIAQVLKNETDDNL AKEMTIPIYENEGYDAKTNTTYHIAGYTKMEKEEKYLLLLQKDSEDDYYIPTAVIFGK INLDPNKRNELFPKNSDTEVAINKVQAEVLKNLEKEIDREDK" gene 708326..708860 /locus_tag="lmos27" /db_xref="GeneID:18245132" misc_RNA 708326..708860 /locus_tag="lmos27" /product="rli33" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245132" regulatory 709124..709129 /regulatory_class="ribosome_binding_site" gene 709134..709562 /locus_tag="lmo0672" /db_xref="GeneID:985014" CDS 709134..709562 /locus_tag="lmo0672" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464199.1" /db_xref="GeneID:985014" /translation="MGFLEAYKSFWRNYVNFSGRAPRSAYWYVVLWNVIIFVILYALA FIFGISAIMEAAMGGTGMAGGGGAIVLVIILWLYLLAALLPTISLMVRRLHDSGKSGF FVLLSLIPFAGGIIMLIFMCLESDGPNQYGDGDIDSKFDF" misc_feature 709146..709529 /locus_tag="lmo0672" /note="Uncharacterized membrane protein YhaH, DUF805 family [Function unknown]; Region: yhaH; COG3152" /db_xref="CDD:442386" regulatory complement(709560..709595) /regulatory_class="terminator" regulatory 709571..709606 /regulatory_class="terminator" gene complement(709601..709810) /locus_tag="lmo0673" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987146" CDS complement(709601..709810) /locus_tag="lmo0673" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0673" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464200.1" /db_xref="GeneID:987146" /translation="MYIEIYTVNGESIRLDDDAKINNISIHELSKADLKNLFNEKCIE LTKYDLTYFINTNQVNWFLVSEGIH" regulatory complement(709818..709823) /regulatory_class="ribosome_binding_site" gene complement(709829..710749) /locus_tag="lmo0674" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985015" CDS complement(709829..710749) /locus_tag="lmo0674" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0674" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464201.1" /db_xref="GeneID:985015" /translation="MPKSEIRKLLQEIKKQVDNPGNSSTTEIKKMASEAGIDEQTAEE IYHLLTEFYQAVEEHGGIEKYMHSNISWLKIELELLSACYQIAILEDMKVLDISEMLS LNDLRIFPKTPSQLQNTYYKLKKELIQVEDIPKNKPGRKRKTQKNTKKEKTNIFGKVV PAEFKAPASIKEQISYDKSREKNLVDLLSGVKSNVQLLSENQGEENNVYDLLKSIYSL SSLAVQKEELDKKYQDLQTKCQELEQENSYLKQQNETMTDSFHTLVLQVADFAYASDL DQIQALPLFSQQLVVTLNQLGVFKENYKQM" misc_feature complement(710297..710725) /locus_tag="lmo0674" /note="DNA binding domain of the motility gene repressor (MogR); Region: MogR_DNAbind; pfam12181" /db_xref="CDD:403419" regulatory complement(710761..710766) /regulatory_class="ribosome_binding_site" gene 711121..711435 /locus_tag="lmo0675" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987142" CDS 711121..711435 /locus_tag="lmo0675" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0675" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464202.1" /db_xref="GeneID:987142" /translation="MEYFLSLLKIIVLLAVLAGISYFLVKKNKQANRTRKSENDLIKL KDTLLISHQLRAVLLEADGEKVLAIISNNDIRTVSLKGKNDQNEKLFRELLLKEETKE NA" regulatory 711413..711418 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0675" gene 711428..712195 /gene="fliP" /locus_tag="lmo0676" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985021" CDS 711428..712195 /gene="fliP" /locus_tag="lmo0676" /experiment="EXISTENCE:[PMID:19448609]" /note="FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FliP" /protein_id="NP_464203.1" /db_xref="GeneID:985021" /translation="MRKITSRRVFQVSFIVIFAISLVVFWPGVNVHAESWMDSLGVNG TDGVNSSVALFVLVTVLSLSASIVLMFTHFTYCIIVLGLTRQGLGATNLPPNQVLVGL ALFLSLFMMQPLITAWYDDVYKPSQKEEWSASKVWDETQPLLTKYVAENTYKHDINMM LKAEGEDPVTKKEDAPLMALMPAFILTQITQGFLTGMFIYLAFIFIDLIVSTLLMYLG MMMVPPMTISLPFKILVFIFIGGYGLITNMIFQTIHF" misc_feature 711464..712192 /gene="fliP" /locus_tag="lmo0676" /note="flagellar biosynthesis protein FliP; Reviewed; Region: fliP; PRK05699" /db_xref="CDD:235566" regulatory 712195..712200 /regulatory_class="ribosome_binding_site" gene 712208..712480 /gene="fliQ" /locus_tag="lmo0677" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985022" CDS 712208..712480 /gene="fliQ" /locus_tag="lmo0677" /experiment="EXISTENCE:[PMID:19448609]" /note="with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FliQ" /protein_id="NP_464204.1" /db_xref="GeneID:985022" /translation="MNLTPITQIFQDFFYSGLALILPVSLICIVVVIVVAILMAMMQI QDQSLTFLPKIVAFVVALFILGPWMFEHMTDLFVGIFSKLPLMIRV" misc_feature 712208..712474 /gene="fliQ" /locus_tag="lmo0677" /note="flagellar type III secretion system protein FliQ; Region: fliQ; PRK05700" /db_xref="CDD:235567" regulatory 712472..712477 /regulatory_class="ribosome_binding_site" /gene="fliQ" /locus_tag="lmo0677" gene 712483..713244 /gene="fliR" /locus_tag="lmo0678" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985024" CDS 712483..713244 /gene="fliR" /locus_tag="lmo0678" /experiment="EXISTENCE:[PMID:19448609]" /note="FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FliR" /protein_id="NP_464205.1" /db_xref="GeneID:985024" /translation="MEFEFFLAVVIVFSRVASFLFFFPLLKGRNIPNSVKVVFGMAIS IPVATWVDVSGITTLPDLLLRVTSEVVFGLALAKLVEIIAVIPKMAGFMIDYDLGFSQ VNLIDPSYGTQNSITAAILDTFFVVIFLSLQGMDYLIYYLMKSFEFTASVSILFEKGF IDLLLGTLGFALASAVSIALPIMGSIFIVNIILAFISKSAPQINIFMNAFIIKITFGI FILACAVPILSTVFKNLTDEMIQQYVSFFDYLLKK" misc_feature 712492..713208 /gene="fliR" /locus_tag="lmo0678" /note="flagellar type III secretion system protein FliR; Region: fliR; PRK05701" /db_xref="CDD:235568" regulatory 713244..713249 /regulatory_class="ribosome_binding_site" gene 713260..714306 /gene="flhB" /locus_tag="lmo0679" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986322" CDS 713260..714306 /gene="flhB" /locus_tag="lmo0679" /experiment="EXISTENCE:[PMID:19448609]" /note="membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FlhB" /protein_id="NP_464206.1" /db_xref="GeneID:986322" /translation="MAKDNKTEKATPRRIKKARNEGNVAKSKELNNAFSLLIVAGLLY FFGEMFIKNTIQAFVALLKQPPKLANMESYSLFYLMEFGKVLMPIMVMVVIFGLMNYG VQVGILFSAKAVKPQFKRLNPANYFKRVFSVKGIVEVVKALLLITLLSYVAYIGFRDH LDTLISYTGQNWLYSLGQIFALFKNEFLALFLVIAVIGLLDFFYQRYDYKKGLRMSKQ EIKDEMKDSEGRPEVKQRQRSIARGLLQGSITKKMADATFVVNNPTHISVVMRYDKTK DHAPKLLVKGEDELALFIRQVADTDGVPMITNRQLARSIYYTTNPDEYIQEDLYKDVI EVMKELMDADKIKF" misc_feature 713260..714303 /gene="flhB" /locus_tag="lmo0679" /note="flagellar type III secretion system protein FlhB; Region: flhB; PRK05702" /db_xref="CDD:235569" regulatory 714340..714345 /regulatory_class="ribosome_binding_site" gene 714353..716428 /gene="flhA" /locus_tag="lmo0680" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986323" CDS 714353..716428 /gene="flhA" /locus_tag="lmo0680" /experiment="EXISTENCE:[PMID:19448609]" /note="membrane protein involved in the flagellar export apparatus" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FlhA" /protein_id="NP_464207.1" /db_xref="GeneID:986323" /translation="MGNLGAIKKYFAILIAVSFVIALIVPLPPFVLDLVLVTILAFSV LVYMRATSIKDWNELKSFPSLLLLMGIFRVSINISTTRAILTTGDPGQVIKQFGNFVI GSNFVVGIVIFIILIVFQFIVANGSSRTAEVAARFTLDALPGKQMAIDADLNQRLITE PEAKEKRAYLNMETEFYGAMDGAGKFVKGDVLFTVLLAVVNIVFGLIVGMVQGGLSFG EAAVKYTELTIGDGIVSQIGSLLMAMSAGVIVTRVFDGSDDNVAVGIFKELMQNSVVV YTLAAMFILMGVFSPLPTIPFVGIGVVLGIIGYRTQFNLKKKEQLELEKEMELIQSET NSAEAEHNQAFGAAREKFPVVVELGLNIAALVKQKMNGETAKDKVVLMRKSILQDLGI GVPGINFKDNTSFQPRGKYEIKVKGVAVASGVLKAGHLLALKTPGVMMDLDAEPTKDP IFGEDGYWILPGELEDAQMKNYQVLEPLSILITHLDVVLRKNLHELLMRQQIKDLIDG LADENQILIDEIKKKEIDYSLIQGVLRQLLKEGISVRDLPTIVEGIIDGQTIYPNDLD GITAFVRERISKVICEQAKNQDGKIYALLLQDSIEMDTEIVNTPYYGYALNWALDKEL PIIQKVRDTVNKAQLTGREPVILTRRKDFRFGFVRVLERYQLDVPVLSISELSPETEV EQIALIEPT" misc_feature 714383..716425 /gene="flhA" /locus_tag="lmo0680" /note="flagellar type III secretion system protein FlhA; Region: flhA; PRK06012" /db_xref="CDD:235672" regulatory 716432..716437 /regulatory_class="ribosome_binding_site" gene 716450..717673 /locus_tag="lmo0681" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985019" CDS 716450..717673 /locus_tag="lmo0681" /experiment="EXISTENCE:[PMID:19448609]" /note="Positive regulator of class III flagellar genes" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis regulator FlhF" /protein_id="NP_464208.1" /db_xref="GeneID:985019" /translation="MGKHLVEKMEIFKGNSKREIHKKIQLVTNEPYKITDERVTKLGI FKKQYEVTAVIMSEVAIADGRMDFQETFQKSVVKTRPKTDDLLKKEKLLEMLAAGAEL AQSTPLLEERKTQEEELSSMRLELAALNRELAVKMREEREQNSDFVKFLKGRGISDTY VADFMQAGRKQFKQVETAHLDDITDWFVPYLSGKLAVEDSFDLSGHRIISLIGQTGVG KTTTLVKLGWQLLKQNRTVGFITTDTFRSGAVEQFQGYADKLDVELIVATSPAELEEA VQYMTYVNCVDHILIDTVGRNYLAEESVSEISAYTDVVHPDLTCFTFSSGMKSADVMT ILPKLAEIPIDGFIITKMDETTRIGDLYTVMQETNLPVLYMTDGQNITENIFRPKSRW LAERFVGTDRRQVVE" misc_feature 716450..717670 /locus_tag="lmo0681" /note="flagellar biosynthesis regulator FlhF; Provisional; Region: PRK12726" /db_xref="CDD:183704" regulatory 717656..717661 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0681" gene 717670..718449 /gene="flgG" /locus_tag="lmo0682" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985030" CDS 717670..718449 /gene="flgG" /locus_tag="lmo0682" /experiment="EXISTENCE:[PMID:19448609]" /note="makes up the distal portion of the flagellar basal body rod" /codon_start=1 /transl_table=11 /product="flagellar basal body rod protein FlgG" /protein_id="NP_464209.1" /db_xref="GeneID:985030" /translation="MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVIS RNKVNYQNGPVTRQVGTIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNF FITAKNGEISLSRGGQFHSDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLY NAETSQYLGRLGTKFVSANQADSLVKDGEGRLHINGVNTMNLPAGQGIIQNGVIETSN VDLGIEMVQLMDNQRMVQASKNVVNMFDKVYDKEATGLIRQ" misc_feature 717670..718443 /gene="flgG" /locus_tag="lmo0682" /note="flagellar basal-body rod protein FlgG; Region: flgG; PRK12819" /db_xref="CDD:183769" regulatory 718463..718468 /regulatory_class="ribosome_binding_site" gene 718478..719266 /locus_tag="lmo0683" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985031" CDS 718478..719266 /locus_tag="lmo0683" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="chemotaxis protein CheR" /protein_id="NP_464210.1" /db_xref="GeneID:985031" /translation="MIPDLEKDYLYFTRVVKRDLGLDLALYKETQMKRRILSFIVKKK YITFGEFFKHLKKDAVLLDEFISLITINVSSFFRNRNRWDALEKQVLPRLLEDSRGKL RVWSAACSSGEEPYSLAMMMERSVGTRHYDILATDLEPAILKRAVIGEYQSRQMEELS EQERHTAFVEKGDTYQILPKYRKSIRFRRHDLLTDYYEKGFDLIVCRNVLIYFTAEGK HQAYQKFAESLRRGGVLFIGGSEQILNPADYGLATLNNFFYIKT" misc_feature 718478..719260 /locus_tag="lmo0683" /note="Methylase of chemotaxis methyl-accepting proteins [Signal transduction mechanisms]; Region: CheR; COG1352" /db_xref="CDD:440963" regulatory 719278..719283 /regulatory_class="ribosome_binding_site" gene 719291..719626 /locus_tag="lmo0684" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985027" CDS 719291..719626 /locus_tag="lmo0684" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0684" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464211.1" /db_xref="GeneID:985027" /translation="MGRIENIKNLAFFEDKPGLAEQILMLEKKTQLFLPNEFEIRQTV GYEIGDKEVILGRLESFYFLALKGVGENNYRSQAFASEADAKAFFVHLPEMENELVAF WLNEVELVR" misc_feature 719294..719620 /locus_tag="lmo0684" /note="Protein of unknown function (DUF3964); Region: DUF3964; pfam13107" /db_xref="CDD:289852" regulatory 719638..719643 /regulatory_class="ribosome_binding_site" gene 719653..720504 /locus_tag="lmo0685" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985036" CDS 719653..720504 /locus_tag="lmo0685" /experiment="EXISTENCE:[PMID:19448609]" /note="With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine." /codon_start=1 /transl_table=11 /product="flagellar motor protein MotA" /protein_id="NP_464212.1" /db_xref="GeneID:985036" /translation="MEITTIIGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTI TAVMMAHPWSDVKVVPKLFKILFTKEKMPDKVDVLVQYKEYADEIRRSGVLALEDSVD EIEDPFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGV LGAAMGLIHAMGEMSNPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVH LRYMMIEGVVALQERNAPRVVEERLLSFLSPKEKDVLRNGKGKKTREVEEIERGQASQ ETAGGTR" misc_feature 719653..720444 /locus_tag="lmo0685" /note="flagellar motor protein MotA; Validated; Region: PRK08124" /db_xref="CDD:181238" regulatory 720449..720454 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0685" gene 720464..721291 /gene="motB" /locus_tag="lmo0686" /db_xref="GeneID:986861" CDS 720464..721291 /gene="motB" /locus_tag="lmo0686" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="flagellar motor rotation MotB" /protein_id="NP_464213.1" /db_xref="GeneID:986861" /translation="MAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAK KFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAK KAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSGS AELSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFM EAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE" misc_feature 720464..721267 /gene="motB" /locus_tag="lmo0686" /note="flagellar motor protein MotB; Reviewed; Region: motB; PRK07734" /db_xref="CDD:236080" regulatory 721287..721292 /regulatory_class="ribosome_binding_site" gene 721301..721801 /locus_tag="lmo0687" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985029" CDS 721301..721801 /locus_tag="lmo0687" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0687" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464214.1" /db_xref="GeneID:985029" /translation="MQLFLSGSHTLTDYDKQEIQAYLEKFAPVNHIHLLCYKSIENEV LQFFLKKEHLAPRLSIYTFAPKECLPEPFLSAIDYLERLGSSYQSFGYFDTVIAKPTY EKFLAQIVSKMDLVCCFYNGDKPTDVIPVDVAKAFDVQSMIYDLPKAKKHLLHRASSD KIKLVN" regulatory 721810..721815 /regulatory_class="ribosome_binding_site" gene 721824..723737 /locus_tag="lmo0688" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986281" CDS 721824..723737 /locus_tag="lmo0688" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464215.1" /db_xref="GeneID:986281" /translation="MRPLISICMIVKNEAHILRQSLASFRKFTEEIIIVDTGSTDETK EIAQEFTDFVYDFEWTGNFSDARNFAAKHATGKWILAIDADECLEEESYRKLEKQLKS PTEPIQMAQIISFTGEKGRVTTTNQMARVYKNDGTICFRGVIHEQLEAIDKRPIAAGV AEVKIYHYGYMSEIVEKQDKSDRNLRLLEKEVKNNKNSGFVHFNIGQEMNRLGNKKEA LKEFSEAFRLRDHNHYIWAKLSAYHIAELLEQEKRYDESLAIIEEARVIWPNVPEFPL KKANILYVNHQLEDAKEIYQSLLENTAIDYQPIVLYEATNFMPHKMLGTIYLEEKDYT RAMTHFSKAYAENSSDYGVMFQMIMLLSKFHQPKEIFAFMERHHFISSTETGLRLLSM TTQQGYAELSELIVQSLTDVYPPVAEATEVKIATIRNVFPVISESAILFGVKEELIDA ADLCLWHYENPQLPIENVMKNSDVGDIYDFIFENGPRISKKRYLFVLERAIALGKGEF ADYLLALRNVYHDSINSHIADLFFQYDFADIALDFYNIVDADEVTKQGYINLINYLVD ADVLDEALAIAERGIDNFSTDFRFYLWAIKIDTENRANRISEAMDEFPNNRYLAKLLD EVTMLQDTVTNNR" misc_feature 721836..722450 /locus_tag="lmo0688" /note="UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide; Region: Beta4Glucosyltransferase; cd02511" /db_xref="CDD:133005" misc_feature order(722070..722072,722076..722078) /locus_tag="lmo0688" /note="putative metal binding site [active]" /db_xref="CDD:133005" misc_feature 722331..723050 /locus_tag="lmo0688" /note="Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis]; Region: LapB; COG2956" /db_xref="CDD:442196" misc_feature 722424..722504 /locus_tag="lmo0688" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature order(722430..722435,722442..722447,722451..722453, 722523..722525,722547..722552,722559..722564, 722568..722573,722640..722642,722649..722654, 722661..722666,722673..722675) /locus_tag="lmo0688" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature 722517..722624 /locus_tag="lmo0688" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 722637..722723 /locus_tag="lmo0688" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 722772..722858 /locus_tag="lmo0688" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" regulatory 723736..723741 /regulatory_class="ribosome_binding_site" gene 723750..724658 /locus_tag="lmo0689" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987162" CDS 723750..724658 /locus_tag="lmo0689" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="chemotaxis protein CheV" /protein_id="NP_464216.1" /db_xref="GeneID:987162" /translation="MTEEKGILLQSGTNELEIVTFTVGENLFCINVLKVKEIIHPLEV TPVPDSNPAIEGVSQVRGEIMPVVNLARVMKLPEIEPENTKFIITELNQMKIVFRVDE VHRIQRISWEQIEEPEKLSIGLEELAVGIVKLDGNLVLLLDYEKIIYEISGNADFAVT GEDRIARKVNREEKTIFIAEDSQMLRQLLEDTLHEAGYTNLQFFANGREAQEHIFKLL KEQKEQTFENVNLLITDIEMPQMDGHHLTKVIKEDEIGRELPVVIFSSLITEDLEHKG AGVGADAQVSKPNIHQLINILDELVL" misc_feature 723774..724193 /locus_tag="lmo0689" /note="Chemotaxis signal transduction protein CheW [Signal transduction mechanisms]; Region: CheW; COG0835" /db_xref="CDD:440597" misc_feature 724275..724613 /locus_tag="lmo0689" /note="phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs); Region: REC; cl19078" /db_xref="CDD:473134" misc_feature order(724590..724601,724605..724607) /locus_tag="lmo0689" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:381085" regulatory 724662..724707 /regulatory_class="terminator" regulatory 724881..724886 /regulatory_class="ribosome_binding_site" gene 724896..725759 /gene="flaA" /locus_tag="lmo0690" /db_xref="GeneID:987167" CDS 724896..725759 /gene="flaA" /locus_tag="lmo0690" /experiment="EXISTENCE:[PMID:19448609]" /note="structural flagella protein" /codon_start=1 /transl_table=11 /product="flagellin" /protein_id="NP_464217.1" /db_xref="GeneID:987167" /translation="MKVNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAA GLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSALSSMSSILQRMRQLAVQSSNGSF SDEDRKQYTAEFGSLIKELDHVADTTNYNNIKLLDQTATGAATQVSIQASDKANDLIN IDLFNAKGLSAGTITLGSGSTVAGYSALSVADADSSQQATEAIDELINNISNGRALLG AGMSRLSYNVSNVNNQSIATKASASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQ TPQMLTQLINS" misc_feature 724896..725756 /gene="flaA" /locus_tag="lmo0690" /note="FliC/FljB family flagellin; Region: PRK12805" /db_xref="CDD:183760" regulatory 725800..725836 /regulatory_class="terminator" regulatory 726020..726025 /regulatory_class="ribosome_binding_site" gene 726034..726393 /gene="cheY" /locus_tag="lmo0691" /db_xref="GeneID:985049" CDS 726034..726393 /gene="cheY" /locus_tag="lmo0691" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="chemotaxis response regulator CheY" /protein_id="NP_464218.1" /db_xref="GeneID:985049" /translation="MLKLLIVDDAMFMRTMIKNIVKDSDFEVVAEAENGLEAVKKYDE VKPDIVTLDITMPEMDGLEALAQIMAKDPSAKVIMCSAMGQQGMVVDAIKKGAKDFIV KPFQADRVLEALEKAAK" misc_feature 726040..726384 /gene="cheY" /locus_tag="lmo0691" /note="phosphoacceptor receiver (REC) domain of chemotaxis protein CheY; Region: REC_CheY; cd17542" /db_xref="CDD:381097" misc_feature order(726283..726291,726298..726300,726310..726312, 726328..726333,726337..726339,726358..726360) /gene="cheY" /locus_tag="lmo0691" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:381097" regulatory 726399..726404 /regulatory_class="ribosome_binding_site" gene 726413..728269 /gene="cheA" /locus_tag="lmo0692" /db_xref="GeneID:985032" CDS 726413..728269 /gene="cheA" /locus_tag="lmo0692" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component sensor histidine kinase CheA" /protein_id="NP_464219.1" /db_xref="GeneID:985032" /translation="MTTNMLDLFIEEASEHLQALNDNLLQLEKDPTNGQLVSEIFRSA HTFKGMSATMGFQQVADLTHAMENVLDEVRNNRLAVTEHLVDIIFTCTSHLETMVSDI QHGGQGAADISKTVADLEALLHPEQETDLTVEKTYRIAIQIEEAAILKAVRAVMCLER LAEMGIISETTPDREAIELEEFEQSFEVVLESAQTKDEIKAVILDISEIEKVTVTEEV EEVQVIEPIKKAAKQTTKRLENKTIRVQLEKIEKLMNVFEESVIERARIDEIAEKTNN KELMEHLGRFSSISKEIQNGLLNMRMVPVDSVFNRFPKMVRTLAKELGKKIDLVIEGA DTEVDKIVIDEIGDPLVHLIRNSVDHGAETVEVRRKNGKNETATINLKAFHSGNNVVI EIADDGAGINKRKVLEKAIAKNVVTRAESTKMTDAEIFDLLFDSGFSTADQVSDLSGR GVGLDVVRNTILKIGGKISVESSENAGSTFRIEIPLTLSIIQSMLVATSERRYAVPLA NVAEAITINPADIQHVHGKDLINYRETIIEVLDLGECFHETPLNDTDELLLLVVKNAK RTFGLIIKDIIGQREIVLKTLGGFFSESQIAFSGATILGDGRVVLILNLETF" misc_feature 726425..728254 /gene="cheA" /locus_tag="lmo0692" /note="Chemotaxis protein histidine kinase CheA [Signal transduction mechanisms]; Region: CheA; COG0643" /db_xref="CDD:440408" misc_feature 726821..727045 /gene="cheA" /locus_tag="lmo0692" /note="P2 response regulator binding domain; Region: P2; pfam07194" /db_xref="CDD:462116" regulatory 728269..728274 /regulatory_class="ribosome_binding_site" gene 728282..728581 /locus_tag="lmo0693" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985035" CDS 728282..728581 /locus_tag="lmo0693" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliY" /protein_id="NP_464220.1" /db_xref="GeneID:985035" /translation="MEQVFQVELPEWEPKETPQEGREKGSIRQVDNIGVNLIVRLGKK EMPVGDIAELSIGDVLEVEKKPGHKVEIFLDEKKVGIGEAILMDENFGIVISEID" misc_feature 728282..728578 /locus_tag="lmo0693" /note="flagellar motor switch protein; Validated; Region: PRK06788" /db_xref="CDD:180693" regulatory 728586..728591 /regulatory_class="ribosome_binding_site" gene 728600..729010 /locus_tag="lmo0694" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985033" CDS 728600..729010 /locus_tag="lmo0694" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0694" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464221.1" /db_xref="GeneID:985033" /translation="MKQEAYNAVKMKVDQEKTAILKELQLLLSKREKVAEKLAHEKEV YYSRTKKERLQVVVLAGSMQLDAFSPSRIQQMEREITQISQYIKSNEQILEKLEEKGK QAKKMYDDTRKKWQQLENKREEQTLRDLKMVLLK" regulatory 729013..729018 /regulatory_class="ribosome_binding_site" gene 729026..730072 /locus_tag="lmo0695" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985037" CDS 729026..730072 /locus_tag="lmo0695" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0695" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464222.1" /db_xref="GeneID:985037" /translation="MLIPDNLLQPVVGKKQVEPKESLAEELVELPFISLLMENSPAPL IKGEADNEEQATIPLKEIAPSLVSAKLLDSEPETKLPSAPLELKEVKETLAAIAKQAI DQPKIDSAPQVAQPPEMNTPKEPTKNTTREQQPPPELIMPTKDSPKLAENVAKNQPAL AKLPQEKEAVQLFKASIKEPVTAKEEVAVKKPAESSNIWHDTTKQLTPAAKVEVPVTL KQLDKTITDQIEQLQKFQVKQNKAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTA KQKLEQMAQDLHNRFRDRGVEVAVTMTEKQAPKENGQGSEGRHHGESKKEKERENPHQ EKAKQQVFDLEEET" misc_feature 729434..730018 /locus_tag="lmo0695" /note="Flagellar hook-length control protein FliK [Cell motility]; Region: FliK; COG3144" /db_xref="CDD:442378" misc_feature 729737..729922 /locus_tag="lmo0695" /note="Flagellar hook-length control protein FliK; Region: Flg_hook; pfam02120" /db_xref="CDD:460451" regulatory 730059..730064 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0695" gene 730074..730496 /gene="flgD" /locus_tag="lmo0696" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985038" CDS 730074..730496 /gene="flgD" /locus_tag="lmo0696" /experiment="EXISTENCE:[PMID:19448609]" /note="acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod" /codon_start=1 /transl_table=11 /product="flagellar basal body rod modification protein" /protein_id="NP_464223.1" /db_xref="GeneID:985038" /translation="MDGISSLSGASQDTNNAVTSSVSKTLGKDDFMKLFLTSLQYQDP SSPLDTNEMMSQMAQLSLMEQVANMTTAVDKLSEQAQNSALQSAVNFIGKDIKGVSLN GEVISGKVESVQQTTNGVMLKLKDNDSLVPMTYVTEIN" misc_feature 730074..730493 /gene="flgD" /locus_tag="lmo0696" /note="flagellar basal body rod modification protein; Provisional; Region: flgD; PRK11911" /db_xref="CDD:138812" regulatory 730503..730508 /regulatory_class="ribosome_binding_site" gene 730516..731751 /gene="flgE" /locus_tag="lmo0697" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985043" CDS 730516..731751 /gene="flgE" /locus_tag="lmo0697" /experiment="EXISTENCE:[PMID:19448609]" /note="the hook connects flagellar basal body to the flagellar filament" /codon_start=1 /transl_table=11 /product="flagellar hook protein FlgE" /protein_id="NP_464224.1" /db_xref="GeneID:985043" /translation="MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDL LYQNTMGSVAGGLYAGTNPMSFGSGSKIGAILTDYTAGSPTSTGRNKDAALQGRGFFI AGDNAGGNIVYTRDGSFAVSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNS AIPGEATKNGSLSGNIPLDWGEKDTISSELSVYDNAGGKHKLQVNMKAATPDASGNVS YEYEIQMDGKALTPPVTGTLNYNAQGELTNPDALKNIQINSTVNGKQVNMGLNLSGLT NYGTNQVFSPTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLV KMGNGEYVPGLSSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGN TKVIRVADDVMKQIVNLIQ" misc_feature 730516..731748 /gene="flgE" /locus_tag="lmo0697" /note="Flagellar hook protein FlgE [Cell motility]; Region: FlgE; COG1749" /db_xref="CDD:441355" regulatory 731750..731755 /regulatory_class="ribosome_binding_site" gene 731765..732001 /locus_tag="lmo0698" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985039" CDS 731765..732001 /locus_tag="lmo0698" /experiment="EXISTENCE:[PMID:19448609]" /note="One of three proteins involved in switching the direction of the flagellar rotation" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein" /protein_id="NP_464225.1" /db_xref="GeneID:985039" /translation="MKINHTIPLRIDFELGRTKQPVGSLLDVKKGTVFRLEDSTANVV KITISGKCIGYGEILTKDGKMFVKITKLGEGSSS" misc_feature 731765..731986 /locus_tag="lmo0698" /note="flagellar motor switch protein; Validated; Region: PRK06789" /db_xref="CDD:180694" regulatory 732007..732012 /regulatory_class="ribosome_binding_site" gene 732022..733014 /gene="fliM" /locus_tag="lmo0699" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987173" CDS 732022..733014 /gene="fliM" /locus_tag="lmo0699" /experiment="EXISTENCE:[PMID:19448609]" /note="with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliM" /protein_id="NP_464226.1" /db_xref="GeneID:987173" /translation="MSDKLSQEQIDALLSQMSEGKVVDESTEIGDFGRFHPYDFHKPE KFGAEHLESLKTIASAFTKKSMEFVSQRIRIPIHTEATLADQVSFASGYIETMPNDSY IFCIIDLGNPELGQIIIELDLAYIIYIHECLSGGNPKRKLSERRLLSVFEELTLKSIL EKFCEALKDSFKSVHPISPEIVNIETNPALLRVTSPNDMMALVSVDIKSEFWISTMRI GVPFFSVEEIMNKLENVVEYTFDKRRNFDAEVEQELHQVEKEARIRVGEIKTTWKELN KLEVGDVLLTETHIRDTLKGYVTEKWKFECYMGKSGNQKAVKFMRHTGRTEQER" misc_feature 732022..733008 /gene="fliM" /locus_tag="lmo0699" /note="flagellar motor switch protein FliM; Validated; Region: fliM; PRK06666" /db_xref="CDD:235849" regulatory 733004..733009 /regulatory_class="ribosome_binding_site" /gene="fliM" /locus_tag="lmo0699" gene 733017..734564 /locus_tag="lmo0700" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985046" CDS 733017..734564 /locus_tag="lmo0700" /experiment="EXISTENCE:[PMID:19448609]" /note="One of three proteins involved in switching the direction of the flagellar rotation" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliY" /protein_id="NP_464227.1" /db_xref="GeneID:985046" /translation="MEQLLEKNITQMELDVIGEIANISFGSASTVLSDLLHQQVTIST PKVEIVDLYNTKDIDIPHVVLEVNFHKGIEMRNLFVLQSEVAAAIADLMMMGDGNIDP NEELSELHLSAVQEAMNQMMGHSATAMSNMFGEMIDITTPDIKVIALKEQLEDTNDQT MIKVGFDLIIGDLITSNLMQLIPVDKGRELAKRLLGDAVPEADPVKEEISLTAEELDV FLEVCNIGIGSASTVLSKLLNRKVSLQIPTARVIDSKEFEFNERPCLVTSVEFVEGLR SSNTFIISKNAALIMADLMMMGDGIVQEDAELTELEVSAVQELMNQMMGFSATAMSEM LGTKIDISPPTMEFCNFGDTMIQKNIEEGKTVEVIFPLEVDGLLKTPMYQIFNPAAAK EMAQLMLGIQAKEVAEKEATTPAEIIEPEKPAEPIKHTVIEEKETLSEMEQILEDIPV TLEVVFGTAKVKLEKFISWCEKDVIILKESMNEPLVLALNGVTIGKGILVRVDDHFGI QMTELVR" misc_feature 733017..734558 /locus_tag="lmo0700" /note="flagellar motor switch protein; Reviewed; Region: PRK06782" /db_xref="CDD:235861" regulatory 734556..734561 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0700" gene 734570..735973 /locus_tag="lmo0701" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985048" CDS 734570..735973 /locus_tag="lmo0701" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0701" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464228.1" /db_xref="GeneID:985048" /translation="MRKLGLMTILFWMFLSVQAFAADLEPPMISLEKEQRVFTSGEVI SFHVKNPEELKIVLVNEHGQRKLLDGETYTVTDWDLDGNYQAEFYQADISKPVVTVED LFEVKQLEEVAKDETAPSLKMIEITHDEDVLPTSVLYASAELDDAESGVKQAILLVHS KSNESEMELIRNNYTGEFDAEIPLEKFQLGEELTFQLQLVDFAENEITLDLENTIQLY EPKAPVLSYDGSDITNVQKKIGQVGNRIELTLDKYTTEFPELETENGKTIPLLWQKTA TEWKGSLALTTELSGEIIHIQEMNQYMLVRATSEPFGDIQLINNSILTGTIHPDFTFI SNLYVEVNGQNFPIKRTDNSFTSAEITTTGKITLHWTDWDGQVFSKQMNQEIKPVIEM PDKETIAPPSVIPKEKESLLTSPDPKPSVESHENTPKKQEKKETSTKNKSSSIPFWIP ALMIIGVIIFSGNRAMK" regulatory 735982..735987 /regulatory_class="ribosome_binding_site" gene 735996..737162 /locus_tag="lmo0702" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985034" CDS 735996..737162 /locus_tag="lmo0702" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0702" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464229.1" /db_xref="GeneID:985034" /translation="MKIDGIQESAENRNQLERELIKQNPVVKEGTIKAQMNTEVAVPK TPPVSFSFKELSSLQLNGTSAASLELYMKLMMNNAKKANDLIFYVMRAGIKNPTDSTK WQTVRSEISSQLSTILMKQHNFEAYFSENPANQKLFLANQKIMNEISFLLKMLPTLTF ETTGKYDFLRMMQIASGNMETGIQMMREFQGHIEHATRLDSIVDARQETNWMIKVLRE FGNMFQSRHLLPYELQAENINIWKLGSEYLKLMNQLLPQIGAFPNGNIKIFHQQATKP LTELFQELQRLADGQMTQGGIAVILDRMQGQLTRLAQLFQKMEIEAGFTDTERILGSV DAEFASDMTKMMLLAQQEMSFFDLLVKDFRSVSKQPIFFMIVAIFIILLLIILF" regulatory 737257..737261 /regulatory_class="ribosome_binding_site" gene 737269..737733 /locus_tag="lmo0703" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985050" CDS 737269..737733 /locus_tag="lmo0703" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0703" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464230.1" /db_xref="GeneID:985050" /translation="MNNVSIGQISQSKQTNVVRGIQELNQTQQLYFEQMKANGKKQTP SLTEINELITNVTDKKSLVEMDMTVDNVLSYKKAVQTFLNFYVNNVMDYDNIESRHPK YGFSQKMTILKQVEKQTNELDDVMNLIDTKTGHLDMLNRIGEITGMILDVVL" misc_feature 737272..737724 /locus_tag="lmo0703" /note="Protein of unknown function (DUF327); Region: DUF327; pfam03885" /db_xref="CDD:461084" regulatory 737729..737734 /regulatory_class="ribosome_binding_site" gene 737743..738171 /locus_tag="lmo0704" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985042" CDS 737743..738171 /locus_tag="lmo0704" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0704" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464231.1" /db_xref="GeneID:985042" /translation="MQNELINQLEILIEKNVKATDEAILLGKLVQEENWIEAEERQLG LQRELAALQNEYQALKTIIGEDNTLRTVQNTWTPEENAIIDERKKMLLEKENLLRVSV TENQIRTEMQLAFSEHMVDVITGHHAETQAENNMMINETF" misc_feature <737758..>738063 /locus_tag="lmo0704" /note="ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]; Region: ClpA; COG0542" /db_xref="CDD:440308" regulatory 738177..738182 /regulatory_class="ribosome_binding_site" gene 738191..739711 /gene="flgK" /locus_tag="lmo0705" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985054" CDS 738191..739711 /gene="flgK" /locus_tag="lmo0705" /experiment="EXISTENCE:[PMID:19448609]" /note="with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook" /codon_start=1 /transl_table=11 /product="flagellar hook-associated protein FlgK" /protein_id="NP_464232.1" /db_xref="GeneID:985054" /translation="MRLSDFNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTA VYGDGGLLGGKQTGYGVKVTDIKRLTNTALTTQYNNQIAKQSASLYQSGALNQALNLF GTPGKNTPSDNLDNFFTAWAALAKNPDQATNTTALLSSMSIFTDQLNQLHSGLKELET TIAADTDAAIQDLNSLIKKLGSINKAIGNAGSNPPNDLLNQRDQLLSTMAGYAGISVS AHPNNPDVYDVTIGGRLVVQGDETTEITSTRTATGFEFSVDGQKLNMPEGSIIASVRV NQNEIKSYQEKIETFSNGLAKALDDIQVKNVNKTMDDLQKINDALQANPNDEKLLSNR DELLRQLEKFPGVTRSGDTLTIGGVDHPVDTLGTSTYVTDVNDFSIPIFAQSSGKWIL NPAITSNADNKPFLGVIAADIASLKTDKNIQGTTFPSFMDGIITEVATDASKSSATAT ADTQALSSLTESKSSLEGVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML" misc_feature 738191..739708 /gene="flgK" /locus_tag="lmo0705" /note="flagellar hook-associated protein FlgK; Validated; Region: flgK; PRK06799" /db_xref="CDD:180699" regulatory 739711..739716 /regulatory_class="ribosome_binding_site" gene 739723..740598 /gene="flgL" /locus_tag="lmo0706" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985052" CDS 739723..740598 /gene="flgL" /locus_tag="lmo0706" /experiment="EXISTENCE:[PMID:19448609]" /note="with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook" /codon_start=1 /transl_table=11 /product="flagellar hook-associated protein FlgL" /protein_id="NP_464233.1" /db_xref="GeneID:985052" /translation="MRISTNQQASSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPG ATAQILSYNHVLSQLNREKTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTS DKDNMSQSAEEIKGLLDVLISVANSEDDGRYVFSGSSTSVKPFTTDKTTGEIIYNGTT ENKKFRVTDTLEVEVFHDGSAMTDVFNNIQKIVDAMKTGDKDALSALQETNSKNIEII TNSMTNIGGQKNGVTAYDNVLSSKIVDFSERKSNVEEVNMPEAVSNLNKTSIAYQAAL QSSVMVQKLSILNYM" misc_feature 739723..740595 /gene="flgL" /locus_tag="lmo0706" /note="flagellar hook-associated protein 3; Region: flgL; PRK08073" /db_xref="CDD:181222" regulatory 740595..740600 /regulatory_class="ribosome_binding_site" gene 740610..741899 /gene="fliD" /locus_tag="lmo0707" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985041" CDS 740610..741899 /gene="fliD" /locus_tag="lmo0707" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in flagellin assembly" /codon_start=1 /transl_table=11 /product="flagellar capping protein FliD" /protein_id="NP_464234.1" /db_xref="GeneID:985041" /translation="MGSSIASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSR IDLYASLKNALSESLKTMSSFTTYESKTKLATSSNETSFTVSSTSSSVNGSYSIEVQN LATADTYNKAVPDIEAKIGVSGTIKINGKEIKVDADSSMKNVMNSINSAGAKVNIYTL GENMVVTSSTTGVENSIKFEGDSAVLDALGLVQNSPDHLAAEDAKLRINGATVTSATN KVTNYIPGVTINLKKETTGAEKLTIQDQSDEKAASMITSFVNTYNALTSTMKTYTGKG TILQASAADLEANRALNNVFQHKKDGNTLFDFGISVDKEGVLKVDETAMKKMVAEDPT AVERFFFGIGGIGDELYQSLNKTFGSTGFISDETTSMTNEINKLNLKLTDITSRNDTL LTNITDQYNKWLEMMQAMQSDAMTLDALIDGMNSSNK" misc_feature 740619..741890 /gene="fliD" /locus_tag="lmo0707" /note="flagellar hook-associated protein 2; Region: fliD; PRK06798" /db_xref="CDD:180698" regulatory 741904..741909 /regulatory_class="ribosome_binding_site" gene 741918..742304 /locus_tag="lmo0708" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985045" CDS 741918..742304 /locus_tag="lmo0708" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="flagellar protein" /protein_id="NP_464235.1" /db_xref="GeneID:985045" /translation="MQAWKRYTQNELNTSNPIKNTIYIYERCIIEFKKLDKALAELHF SEADLILDKMEKIFEELKLQLNPEAGQELYDNIFGLYEWISEQIRQMQLLKQPVNIDT IIHVITQLKEGYEGVMKHESSKDTFG" misc_feature 741927..742271 /locus_tag="lmo0708" /note="Flagellar protein FliS; Region: FliS; pfam02561" /db_xref="CDD:460591" misc_feature order(741996..741998,742074..742076,742083..742088, 742095..742100,742107..742112,742134..742136, 742143..742145,742152..742160,742164..742166, 742221..742226,742230..742235,742242..742247, 742254..742259,742263..742268) /locus_tag="lmo0708" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:293931" misc_feature 742047..742112 /locus_tag="lmo0708" /note="coiled coil [structural motif]; Region: coiled coil" /db_xref="CDD:293931" misc_feature 742134..742184 /locus_tag="lmo0708" /note="coiled coil [structural motif]; Region: coiled coil" /db_xref="CDD:293931" misc_feature 742209..742265 /locus_tag="lmo0708" /note="coiled coil [structural motif]; Region: coiled coil" /db_xref="CDD:293931" regulatory 742262..742267 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0708" gene 742276..742557 /locus_tag="lmo0709" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985079" CDS 742276..742557 /locus_tag="lmo0709" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0709" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464236.1" /db_xref="GeneID:985079" /translation="MNQAKTHLAELKALFHSTGQLNVSLEEYQAKLNELLKSTEHLPK ETKEAILKETRDVINKGILFTQKQLESTENAFSENKSRNAANLNYAKFF" regulatory 742563..742568 /regulatory_class="ribosome_binding_site" gene 742578..742979 /gene="flgB" /locus_tag="lmo0710" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985059" CDS 742578..742979 /gene="flgB" /locus_tag="lmo0710" /experiment="EXISTENCE:[PMID:19448609]" /note="with FlgF and C makes up the proximal portion of the flagellar basal body rod" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgB" /protein_id="NP_464237.1" /db_xref="GeneID:985059" /translation="MENYTTHIGNYLNYLQTANQVVSNNIANANTPNFKASEASFEES LGSSLRASGQNSAESAGNLTKTNTKHLAGTDIDETNAKVTTKSGSINEDGNNVNVTSE MISLTKNNQMYALAISALNYNSSINTAARGK" misc_feature 742578..742976 /gene="flgB" /locus_tag="lmo0710" /note="flagellar basal body rod protein FlgB; Reviewed; Region: flgB; PRK06797" /db_xref="CDD:180697" regulatory 742979..742985 /regulatory_class="ribosome_binding_site" gene 742991..743401 /gene="flgC" /locus_tag="lmo0711" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984818" CDS 742991..743401 /gene="flgC" /locus_tag="lmo0711" /experiment="EXISTENCE:[PMID:19448609]" /note="with FlgF and B makes up the proximal portion of the flagellar basal body rod" /codon_start=1 /transl_table=11 /product="flagellar basal body rod protein FlgC" /protein_id="NP_464238.1" /db_xref="GeneID:984818" /translation="MFEGINTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKR VVLSEITPFETALTGTKGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAE MTNLMVGQKMYAANTSALQANEKMMEKDLEIGKV" misc_feature 742991..743395 /gene="flgC" /locus_tag="lmo0711" /note="flagellar basal body rod protein FlgC; Reviewed; Region: flgC; PRK05681" /db_xref="CDD:235556" regulatory 743402..743407 /regulatory_class="ribosome_binding_site" gene 743418..743714 /gene="fliE" /locus_tag="lmo0712" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985062" CDS 743418..743714 /gene="fliE" /locus_tag="lmo0712" /experiment="EXISTENCE:[PMID:19448609]" /note="forms a junction between the M-ring and FlgB during flagella biosynthesis" /codon_start=1 /transl_table=11 /product="flagellar hook-basal body protein FliE" /protein_id="NP_464239.1" /db_xref="GeneID:985062" /translation="MAIESINAASVLPKVTLGETAKTDNAAGAGNTFTQMLDSMSDTQ SNAQTSVSNLLTTGEGNASDVLIQMKKAESEMKTAAVIRDNVIESYKQLLNMQV" misc_feature 743418..743711 /gene="fliE" /locus_tag="lmo0712" /note="flagellar hook-basal body complex protein FliE; Region: fliE; PRK01699" /db_xref="CDD:179322" regulatory 743764..743769 /regulatory_class="ribosome_binding_site" gene 743782..745434 /gene="fliF" /locus_tag="lmo0713" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985064" CDS 743782..745434 /gene="fliF" /locus_tag="lmo0713" /experiment="EXISTENCE:[PMID:19448609]" /note="the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod" /codon_start=1 /transl_table=11 /product="flagellar MS-ring protein FliF" /protein_id="NP_464240.1" /db_xref="GeneID:985064" /translation="MAKIKTMYSKLKNWHKGAILVGLFVVVTVLLLYMNTPKTEVTLY KNLSETSQQQVTDQLAKMGVDYTVDKSGNILVDEKVETLVRDKFADLGIPYTGQDGND ILLNSSLGASEEDKKMQEKVGTKVNLEKEIVQSYGTTIDSASVQLTLPESSSIFEEAS QKGTAAVTLKTKNNQTLTSEQVLGIQRTVSAAVPNVASDDVAIIDTKNGVISEADTSK EEGSSAYKNEVDIQNAIGKNVKTDIEGTLSSIFALDNFRVNTNVAVNFDEIKQNTEHY PNDGKVRSNQKDTSTDTSKGSANTTESGTASNADVPNYTEQNGDDTNTYTSEKSSETT NYELDSTIQEIKKHPALAKTNVVVWVDQNALNKNGVDMAEFTKAIGVSAGLTPNMTTE EAGADGEAAAAPTFEGTFQNGDVTIMPIQFLDNATPAEKDTTEKAEPASKAWIWWLAG GLLFAVIAAGIITYIILLKRKEQLEEALEPEEKDYIPAEEAIINPEEHPDFNFQTDAF DLSEPELKARKESLKNKLGEMAKEDPGRAAAVIQKWLNERQE" misc_feature 743878..745422 /gene="fliF" /locus_tag="lmo0713" /note="Flagellar biosynthesis/type III secretory pathway M-ring protein FliF/YscJ [Cell motility, Intracellular trafficking, secretion, and vesicular transport]; Region: FliF; COG1766" /db_xref="CDD:441372" regulatory 745424..745429 /regulatory_class="ribosome_binding_site" /gene="fliF" /locus_tag="lmo0713" gene 745437..746543 /gene="fliG" /locus_tag="lmo0714" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985067" CDS 745437..746543 /gene="fliG" /locus_tag="lmo0714" /experiment="EXISTENCE:[PMID:19448609]" /note="One of three proteins involved in switching the direction of the flagellar rotation" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliG" /protein_id="NP_464241.1" /db_xref="GeneID:985067" /translation="MAETLKETLEETNAELETVEVVETEEKTTTSADSGISRREKAAL IIWSLDEQIATEVVDLLPDASKQRLAREMAKMKEMDGGAVEEATREFLGELELLSGGI AKLDREHLQRLFPDMTTEELNQLIYGVEAESRIGETALDILREIDDVDSLFTIISDES PQTIAMIASYMKPEEASKLLALLPEEKMINTVIGIASLEQFDSEVMQNVSNLLRIKLD TMSNSSLNKTDGIKNVANILNNVTRGLERTIFEHLDAEQAELSERIKEKMFMFEDIIL LDNMTLQQVLAEIQDNNKIARALKNEKEELKEKILSCVSKNRRDMITEELEVLGPIRL SDVEQAQQDIANVVKNLEKDGKIVIQRGEQDVLI" misc_feature 745530..746525 /gene="fliG" /locus_tag="lmo0714" /note="flagellar motor switch protein G; Validated; Region: fliG; PRK05686" /db_xref="CDD:235561" regulatory 746518..746522 /regulatory_class="ribosome_binding_site" /gene="fliG" /locus_tag="lmo0714" gene 746530..747222 /gene="fliH" /locus_tag="lmo0715" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985068" CDS 746530..747222 /gene="fliH" /locus_tag="lmo0715" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0715; binds to and inhibits the function of flagella specific ATPase FliI" /codon_start=1 /transl_table=11 /product="flagellar assembly protein H" /protein_id="NP_464242.1" /db_xref="GeneID:985068" /translation="MSLSNPRIPKGKVTLSDVKMELFYLDDIEETEEIESPYSKELEQ LESHQKELEKHLSAIEIEQQKLANEKAALQAERQAIEELRRDAEAEIEANKQAFEKEK TQIYLTITDFLWDESIDLAERIVHQAIDTRQIEVLPMLTEVIQKLPVAFDKLNVTTHP ETLKALKEENTGTKYDWLLENIHWNFDMRLDYGEFTVEEEKEYFDYRITEIFQTLHKQ NAERKILGGDKP" misc_feature 746530..747219 /gene="fliH" /locus_tag="lmo0715" /note="flagellar assembly protein H; Validated; Region: fliH; PRK06800" /db_xref="CDD:180700" regulatory 747204..747209 /regulatory_class="ribosome_binding_site" /gene="fliH" /locus_tag="lmo0715" gene 747219..748520 /gene="fliI" /locus_tag="lmo0716" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985071" CDS 747219..748520 /gene="fliI" /locus_tag="lmo0716" /EC_number="3.6.3.14" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in type III protein export during flagellum assembly" /codon_start=1 /transl_table=11 /product="flagellum-specific ATP synthase" /protein_id="NP_464243.1" /db_xref="GeneID:985071" /translation="MSWSPKTEAWQELKNTVPYIQKGKIHTVQEQVYISKGPQVKIGD TVMVGENKVLCEVISIEKENNMLLPFNQSDKVAYGDWVYVTDTKITIPADEFLLGKVL NASGDILNEEAGMAKFKQKMPLEAPPIHAFSRAEITDTLETGIKAIDGMLTIGIGQKI GIFAGSGVGKSTLLGMIARNAKADINVIGLVGERGREVKDFLRKDLGEDGLRKSVIVA ATSDESHLMQLRAAKLATSIAEHFRDQGKTVLLMMDSVTRFADARRSVDIAVKDLPIG GKTLLMESYMKKLLERSGKTQNGSITGIYTVLVDGDDMNGPVPDLARGILDGHIVLTR ELATKNHYPAIDVLGSVSRVMEEIVPENQWKTASKIREWMSIYQENELYFKLGTIEQT SDNAAIFTSKEKSYFIHQFLKQLRDESVTLEETSKLMETLV" misc_feature 747219..748517 /gene="fliI" /locus_tag="lmo0716" /note="flagellar protein export ATPase FliI; Region: fliI; PRK06793" /db_xref="CDD:180696" regulatory 748524..748529 /regulatory_class="ribosome_binding_site" gene 748537..749205 /locus_tag="lmo0717" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987208" CDS 748537..749205 /locus_tag="lmo0717" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transglycosylase" /protein_id="NP_464244.1" /db_xref="GeneID:987208" /translation="MNPVEQVISARQAEFQSVFEAAKQSATTFETKLNERLNETTTAK TTSVQTVTDAELARAREAYEALINQSETNSAAPTSSTTTETPTASTGELTNWNNYQIK PISAENEGKYSDLIKTAATKYGVPEALIKRVIQVESNFNPNVVSSAGATGLMQLMYGS NRTDPATNIDAGTKQLASYIKKYDGDLKLALAAYNAGPGNVHKYGGVPPFKETQNYLT KIIG" misc_feature <748867..749202 /locus_tag="lmo0717" /note="Soluble lytic murein transglycosylase or regulatory protein s (may contain LysM/invasin domain) [Cell wall/membrane/envelope biogenesis]; Region: MltE; COG0741" /db_xref="CDD:440504" regulatory 749205..749210 /regulatory_class="ribosome_binding_site" gene 749219..749863 /locus_tag="lmo0718" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985076" CDS 749219..749863 /locus_tag="lmo0718" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0718" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464245.1" /db_xref="GeneID:985076" /translation="MGNWQQKWESWRDMTAAMQQEIKIEAAEKVTSYIKNDQFEEAIN VIRQTENLLNELDFETKMNRVEEQLQAFTSDQEAAKSFEASQLQNIEKPSTKVSFDLS HVKSEAINQFTKRDFNLVDSNDTHMQFLKGNRNFYMDIFNPEESEEYHYANLDEKCQY KNIGFICQNDAAAEIATKLTNEWLETLEAPKKKFLTVNIANLNAMKQNPEVLFQ" regulatory 749870..749908 /regulatory_class="terminator" regulatory 749971..749976 /regulatory_class="ribosome_binding_site" gene 749985..750311 /locus_tag="lmo0719" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985078" CDS 749985..750311 /locus_tag="lmo0719" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464246.1" /db_xref="GeneID:985078" /translation="MKGLTELLKGSLEGMILERISRGETYGYEITKYLNDLGFDEIVE GTVYTILVRLEKKGLVEIEKKKSELGPPRKFYTLSPAGEEELAIFWKRWDFIQGKIMQ VKGGQA" misc_feature 749997..750290 /locus_tag="lmo0719" /note="DNA-binding transcriptional regulator, PadR family [Transcription]; Region: PadR; COG1695" /db_xref="CDD:441301" regulatory 750296..750301 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0719" gene 750311..750634 /locus_tag="lmo0720" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985065" CDS 750311..750634 /locus_tag="lmo0720" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0720" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464247.1" /db_xref="GeneID:985065" /translation="MFNWYKKYREEKRDYKQYKKRIAALPEDYKTAMKAIETYLWNFA KGAGMFEILKNVLEMFENAAADNLELKAVVGDDLAEFADNLLSEFPEETWMDKQRQKL RDSIK" misc_feature 750314..750631 /locus_tag="lmo0720" /note="DNA-binding ferritin-like protein (Dps family) [Replication, recombination and repair]; Region: GINS; COG4817" /db_xref="CDD:443845" regulatory complement(750629..750674) /regulatory_class="terminator" regulatory 750640..750685 /regulatory_class="terminator" gene complement(750680..751327) /locus_tag="lmo0721" /db_xref="GeneID:987135" CDS complement(750680..751327) /locus_tag="lmo0721" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="fibronectin-binding protein" /protein_id="NP_464248.1" /db_xref="GeneID:987135" /translation="MKEFIEPYQYNFIKNQLANVSRAYRSANDTSTLKALKSLTEEKI NELFPESVLEEHKELFSKLHVITSTKEAEPFLEGLKAYVIPFAPPSDVKLKKLFAKTK KLKIPAWSKLDLRDYTFYGWNDIAQQRKYIVTYEDGNLVGVQGTISTEIQKGVCSICH SHSKVSLFMAKTKSSSDGVYTTNGNYICYDSDVCNEQIKAHETLDEFIEVVKKRK" misc_feature complement(750701..751312) /locus_tag="lmo0721" /note="Fusidic acid resistance protein (FusC/FusB); Region: FusC_FusB; cd16342" /db_xref="CDD:319974" misc_feature complement(order(750710..750712,750731..750733, 750770..750772,750776..750778,750782..750784, 750821..750823,750827..750829,750845..750850, 750863..750865,750869..750874,750884..750886, 750890..750892,751211..751213,751220..751225, 751229..751234,751259..751264,751271..751273)) /locus_tag="lmo0721" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319974" regulatory complement(751334..751339) /regulatory_class="ribosome_binding_site" regulatory 751585..751590 /regulatory_class="ribosome_binding_site" gene 751598..753328 /locus_tag="lmo0722" /db_xref="GeneID:986726" CDS 751598..753328 /locus_tag="lmo0722" /EC_number="1.2.3.3" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of acetyl phosphate from pyruvate" /codon_start=1 /transl_table=11 /product="pyruvate oxidase" /protein_id="NP_464249.1" /db_xref="GeneID:986726" /translation="MKKVKASETLVQTLKNWGIDHVYGLPGDSIDTVVDALRKEQEAI EFIHVRHEEVATLAAAAYTKLTGKIGVALSIGGPGAIHLLNGMYDAKMDHVPMLVLAG QVTTDVLNTGFFQEVNLPAIFEDVAVYNKQIDNAETLADVVDEAIRTAYKEKGVAVLT IPNDIPSQVIKASLEAKPVKFEQENPKLDEAAIQEAVTLIEKAEKPVILAGLGTKHAG PELIAFSEKLKIPIIHSLPAKTIVPDDHPNALGNLGKIGTKPAYEAMQETDLLLMFGN DYPYSDYLPKKTDCIQIDIDPAKISKRFPAIVGLVGDAAEIISDLTAKIAPVEERKFL QACQENMQEWWKWLEEDIAQTSDPIAPEVVMANIQKIADKDAVFSIDVGTATVWSTRY LHLTPENDFIVSAWLGTMGCGLPGAIAAKKAFPDRQAIAIVGDGGFSMVMQDFVTAVG LNMPMIVVVLNNQQLSFIKYEQQSAGELNYAIDLPDINYAKFAESCGGIGFRVEKMAD LEAAFENAKLATKPVIIDVSVDSAAAPLPGKIVMDEALGYTKFEIQSVLEDHRFAKMP PLKTILRRFL" misc_feature 751598..753325 /locus_tag="lmo0722" /note="pyruvate oxidase; Provisional; Region: PRK08611" /db_xref="CDD:181502" regulatory 753475..753480 /regulatory_class="ribosome_binding_site" gene 753490..755295 /locus_tag="lmo0723" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986712" CDS 753490..755295 /locus_tag="lmo0723" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="metyl-accepting chemotaxis protein" /protein_id="NP_464250.1" /db_xref="GeneID:986712" /translation="MNLIKNRKLKTKLSINIVITTIMLIGLGATSFLGFRHVATLSDN MVDNNVAPMKEIAKIQTNMAQINIDILTMFDTINGKSTLIKDIDNLYAENDQAIHNFK KANLTAEDKKQLAYFEEKLADMKASASSVISDTSSALDDAELLGAQNRYYQNVKTKFD DATKQLNVLNDMNYKEVENSSQAISDFGVKISLIFTAVIIAVLISLFIFNAYITRVIL KGIRHLQTAVHKVASGDLSYRSTYNGRDELGDITNDLNEMSENLRLMIEDVKKASTDV KSSSDNVIISSEIISAMTTEMDIEMKMMGEQIQTQIGSMKESTDAMDQMTGGVQNVAE YALKVSDLTKDSAEKTNDGIAVINNLVSQMDRISGVMRSSTDVVSQLVNRVGEVEKAL DTVTNIADQTNLLALNAAIESARAGEHGRGFAVVAEEVRKLAEQSRLAVVDINTVLKK IQTESKTTIEVMNTGLSESEAGQKIISETEATFTDLLNRVNDISAQMQNVSQETEEMA AGIEEVNTSISDVTEISNQIGEKSTAALEFAEVNKMKVDELVVISEEMQKISGSLEGY IANFNTEVSEEAVEVTEEPESETKDPGEPVLAENV" misc_feature 753526..755205 /locus_tag="lmo0723" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" regulatory 755294..755299 /regulatory_class="ribosome_binding_site" gene 755308..756036 /locus_tag="lmo0724" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986702" CDS 755308..756036 /locus_tag="lmo0724" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464251.1" /db_xref="GeneID:986702" /translation="MRIWIKSLLVITACIFSLTLLNTKYTFYSPTVKLESAKVVYKLN NEPFNVRLDVPLVNQMDAPTLFNGCEVTSLAMLLQFNGKRVTKNELANNLSTTPIEQN GLHGNPDKAFVGSISGDSPGLGVNHAPIAKLAAKYVNEAHVHDISGNSIQDIITVLST GAPVWIITTTDYHAPKNWQTVQTKEGKKKITYSMHSVIITGFDKNNFYINDPYGHKNR AVKRSVLEEGWSAMGKQAIYLSRP" misc_feature <755344..756024 /locus_tag="lmo0724" /note="Predicted cysteine peptidase, C39 family [General function prediction only]; Region: YvpB; COG4990" /db_xref="CDD:444014" regulatory 756042..756085 /regulatory_class="terminator" regulatory complement(756042..756074) /regulatory_class="terminator" gene complement(756079..756291) /locus_tag="lmo0725" /db_xref="GeneID:986516" CDS complement(756079..756291) /locus_tag="lmo0725" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan-binding protein" /protein_id="NP_464252.1" /db_xref="GeneID:986516" /translation="MVFPKKLVASIAVFISLGFIYFRVSTAVAFENTSSASLLPSTGD AFSVWPIVIGVVLVALAVVLFIKKKI" regulatory complement(756299..756304) /regulatory_class="ribosome_binding_site" gene 756458..756652 /locus_tag="lmos28" /db_xref="GeneID:18245133" misc_RNA 756458..756652 /locus_tag="lmos28" /product="glmS" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245133" gene 756494..756637 /locus_tag="lmo0726" /db_xref="GeneID:986355" CDS 756494..756637 /locus_tag="lmo0726" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464253.1" /db_xref="GeneID:986355" /translation="MLEGEIPEKYRSVDEEEINRSFGGSLPAVHAVVKSYLQIIWVTK WTE" regulatory 756723..756728 /regulatory_class="ribosome_binding_site" gene 756738..758543 /locus_tag="lmo0727" /db_xref="GeneID:986353" CDS 756738..758543 /locus_tag="lmo0727" /EC_number="2.6.1.16" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source" /codon_start=1 /transl_table=11 /product="glucosamine--fructose-6-phosphate aminotransferase" /protein_id="NP_464254.1" /db_xref="GeneID:986353" /translation="MCGIVGYIGTNNAKGILLEGLEKLEYRGYDSAGIALQNKELVTV VKEKGRIADLASLVPSDAFGTTGIGHTRWATHGKPNHENAHPHQSKSGRFTIVHNGVI ENYTLLKEEYLKNHSFVSDTDTEVIVQLIELFAAELSTKEAFKKALSLLHGSYAICLI DQTNTETLYAAKNKSPLLIGKGENFNVIASDAMAVLKETDEFVEIMDKEIVIVTKDGF TLETLEGEEITRASYKAELDASDIEKGTYPHYMLKEIDEQPAVTRKIIQAYQDEAGEI NVDKTIIDEILSSDRIHIVACGTSYHAGLVGKNLIEKMAKIPVEVHVSSEFAYNLPLM SKKPLFIFITQSGETADSRQCLVKVKELGYRTLTLTNVPGSTLDREADHSMYLYAGPE IAVASTKAYTAQISVLAVLAVSLGREIGDEEALNINLAAELGIVATAMEAMVSSKEVI EHIAGEYLATSRNAFFLGRNIDYFVAMEAALKLKEISYIQAEGFASGELKHGTIALIE DGTPVLALITQESINWNIRGNVNEVLARGAKTCIFAMENVAQPGDRFVIPQVHPLLTP LASVIPCQLLAYYAALHRDCDVDKPRNLAKSVTVE" misc_feature 756738..758540 /locus_tag="lmo0727" /note="isomerizing glutamine--fructose-6-phosphate transaminase; Region: PRK00331" /db_xref="CDD:234729" regulatory 758554..758589 /regulatory_class="terminator" regulatory 758641..758645 /regulatory_class="ribosome_binding_site" gene 758656..759396 /locus_tag="lmo0728" /db_xref="GeneID:986299" CDS 758656..759396 /locus_tag="lmo0728" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="riboflavin kinase / FAD synthase" /protein_id="NP_464255.1" /db_xref="GeneID:986299" /translation="MEVSHVTLAPNKDSRAAVLTIGKFDGVHIGHQTILNTALSIKKE NEILTAISFSPHPLWALKQIEIYREMLTPRMEKERWLAYYGVNHLIETEFTSRYAETT PEEFVTDHLTNLNLSHIVVGSEFNFGKGRDSDVDLLRDLCKPYDIGVTSVPVIETNQT KISSTNIRAFIRRGHFQEAEELLGHPWYITGIVENGEMTGLDDYVLPATGTYQTDSGI VNVTNNRTIEVGLSDGLQQLHMKNELSE" misc_feature 758704..759243 /locus_tag="lmo0728" /note="FAD synthetase, N-terminal domain of the bifunctional enzyme; Region: FAD_synthetase_N; cd02064" /db_xref="CDD:185679" misc_feature order(758719..758730,758737..758739,758746..758748, 759025..759027,759115..759117,759139..759147) /locus_tag="lmo0728" /note="active site" /db_xref="CDD:185679" regulatory 759381..759412 /regulatory_class="terminator" regulatory 759467..759472 /regulatory_class="ribosome_binding_site" gene 759479..759958 /locus_tag="lmo0729" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986278" CDS 759479..759958 /locus_tag="lmo0729" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0729" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464256.1" /db_xref="GeneID:986278" /translation="MKIPTTLKHKPVIVVENYEEVDGKNAYHSDAKGLSLGLAQWNDR GKVDISAKVWRHTGDKWSRQSEELPLHRVLDLAILIARTKVHFKDAYRLPHFYDKENP TLDRIGLQGDALTIAVCEDNEYIDEDMQLFEQALKNDDELLSERLKTLSKLLQEAGY" misc_feature 759479..759955 /locus_tag="lmo0729" /note="Family of unknown function (DUF6530); Region: DUF6530; pfam20140" /db_xref="CDD:437972" regulatory 759958..759963 /regulatory_class="ribosome_binding_site" gene 759972..760310 /locus_tag="lmo0730" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986268" CDS 759972..760310 /locus_tag="lmo0730" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0730" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464257.1" /db_xref="GeneID:986268" /translation="MNKDNRKELIRAYKEKSPDAGVYRFISTKSGKSLIDNTMDLKGI ANKLAFGVKIGAGNMLPPEMAKEAKEHGIDTIQFEILEKVDIKPEMTKEDIKEENDVL LSLWLEREDI" misc_feature 759990..760298 /locus_tag="lmo0730" /note="GIY-YIG domain of LuxR and ArsR family transcriptional regulators, and uncharacterized hypothetical proteins found in bacteria; Region: GIY-YIG_LuxR_like; cd10451" /db_xref="CDD:198398" misc_feature order(760032..760040,760071..760079) /locus_tag="lmo0730" /note="GIY-YIG motif/motif A; other site" /db_xref="CDD:198398" regulatory 760311..760341 /regulatory_class="terminator" regulatory 760438..760443 /regulatory_class="ribosome_binding_site" gene 760455..760859 /locus_tag="lmo0731" /db_xref="GeneID:986215" CDS 760455..760859 /locus_tag="lmo0731" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0731" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464258.1" /db_xref="GeneID:986215" /translation="MNPRKSEFVLTLIAGITGIIAGITGIAGGGLLAALSGSEELSNA TAMTAADSEALAAAGGLTVIFSIIALVLGIALIVFAVLIKRNAKVFGILTLVAGVVGF FLVGLLWIVPGVLAVIAGIMCLARKVPTDTFS" misc_feature 760464..760766 /locus_tag="lmo0731" /note="Protein of unknown function (DUF4064); Region: DUF4064; pfam13273" /db_xref="CDD:433076" regulatory 760873..760915 /regulatory_class="terminator" regulatory 761536..761541 /regulatory_class="ribosome_binding_site" gene 761552..763468 /locus_tag="lmo0732" /db_xref="GeneID:985958" CDS 761552..763468 /locus_tag="lmo0732" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan binding protein" /protein_id="NP_464259.1" /db_xref="GeneID:985958" /translation="MKKAFLCLSAIVLSLNFVWINPITGSASKIETTKETNQQVNLKN NVTDIVTSEDLGGQTWLINEVNRQLAPKTVDVNLTFEDLAKITTISLNNRSLTGEVPP EIKNLVSLQRLYLFSNKLSGEIPAELGELTKLTELRLDYNELSGKIPDGLGNISEIAL QNNRLVGQIPLSLYENRTGKNEVNVSGNQVTINSQQSEPSVYSAYTFVYPSSTPEYSG HIKANNSFISNLTNDMNLTPFLKNSPTFINLQVVYMFNSELFDGHDVTITDTNDGRVL YDGTLTSDISIPLTNFKSGVHVINVMLDNAPNNPQNQTTFLIDILPVPAHDLTVNYVD EAGAEIHEPQTVSGNVGDDYDVTTPEFELAIDKYELDTEQMPTNGLGTLSSEAQTVTY VYKKVNGAPVTVKYEDQNGVEITTSDVLTGKLDATYQSKAKEIAGFTLDNSKLPANAS GIFETNPQTVTYVYQAVPATIKAHDSTIYVEDKWSAEDNFDSAVNSVGAAVSFDDLEV EGTVDTTKAGVYPVTYSFAGESVTINVTVKAKDLPAPPVTPTKPVVPIQPTNPDQPDI QAAPGEHQASTDKSEALKVTVAQKEQPTVAGNLKLPTTGDNLWDSVLYSVFGLIAVCV AFSLFFWRKKQKHS" misc_feature 761795..>762073 /locus_tag="lmo0732" /note="leucine-rich repeat receptor-like protein kinase; Provisional; Region: PLN00113" /db_xref="CDD:215061" misc_feature 761807..761878 /locus_tag="lmo0732" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 761879..761950 /locus_tag="lmo0732" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 761951..762013 /locus_tag="lmo0732" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 762014..762088 /locus_tag="lmo0732" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 762536..762736 /locus_tag="lmo0732" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 762758..762946 /locus_tag="lmo0732" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 762965..763162 /locus_tag="lmo0732" /note="Bacterial Ig-like domain (group 3); Region: Big_3; pfam07523" /db_xref="CDD:400072" misc_feature 763349..763459 /locus_tag="lmo0732" /note="LPXTG cell wall anchor motif; Region: Gram_pos_anchor; pfam00746" /db_xref="CDD:366278" regulatory 763783..763788 /regulatory_class="ribosome_binding_site" gene 763798..764307 /locus_tag="lmo0733" /db_xref="GeneID:985919" CDS 763798..764307 /locus_tag="lmo0733" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464260.1" /db_xref="GeneID:985919" /translation="MLNENIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSVPDSD MLISISEVLETPVSTLLGETVMVSKVDDVKAISEKLEIINLQFAQRKTARRKMLYWLF VSLCAVIAIISAVFIILNSPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVV GIFLTRKNV" misc_feature 763798..763989 /locus_tag="lmo0733" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" gene complement(764465..765469) /locus_tag="lmo0734" /db_xref="GeneID:985863" CDS complement(764465..765469) /locus_tag="lmo0734" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="NP_464261.1" /db_xref="GeneID:985863" /translation="MKKTSIKDIAKLSGVSVATVSRVINDNGRFSEETREKVLAVIKE TNYQMNFSAKSLRMNKSFSVGILVPDISNYFFSSVVQQIEAILFDQGYSTIICNTGRN LDKEMAYLNMLESKMVDGLIVISGADEFGFKYTNAENGIPYVCIDRQPKDKKDTIFIS SNHYQGAFEATEALIHAGVKSPVIFMHSRQSSSAKERLKGFQDALKKNNIRYDPDVSK FTVDLQIHDYQKSIITFVNEVTTMDGIFAINDNIALELLNLLPTIGKKIPNDIKVIGF DDTPQCNYTVPKLSSVKQNIPKIAQITVDNLITIIKNPKQKKRITEIVPVELSLKDSI " misc_feature complement(764471..765469) /locus_tag="lmo0734" /note="DNA-binding transcriptional regulator, LacI/PurR family [Transcription]; Region: PurR; COG1609" /db_xref="CDD:441217" regulatory complement(765475..765480) /regulatory_class="ribosome_binding_site" regulatory 765668..765673 /regulatory_class="ribosome_binding_site" gene 765683..766354 /locus_tag="lmo0735" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985578" CDS 765683..766354 /locus_tag="lmo0735" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ribulose-5-phosphate 3-epimerase" /protein_id="NP_464262.1" /db_xref="GeneID:985578" /translation="MSKKLICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVP SFGMGLQDFEEIRQKTQKLVDVHLMIMNPGDYVEMFADKGADIIYIHPEADLHPARTL DKIRNKGKKVGIAINPGTAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAEL VELKKDYTFEIMVDGAISPEKISKLSQLGVKGFVLGTSALFGKKESYAEIIKKLKQEK MEELR" misc_feature 765695..766333 /locus_tag="lmo0735" /note="Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; Region: Rpe; COG0036" /db_xref="CDD:439806" regulatory 766338..766343 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0735" gene 766351..766797 /locus_tag="lmo0736" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985545" CDS 766351..766797 /locus_tag="lmo0736" /EC_number="5.3.1.6" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity" /codon_start=1 /transl_table=11 /product="ribose-5-phosphate isomerase B" /protein_id="NP_464263.1" /db_xref="GeneID:985545" /translation="MKIAIGNDHVGIELKPVIVAYLQDLGHEVDDFGAFSNERTDYPE YGKKVAESVAAGKSDLGILICGSGVGISIAANKVNGIRAVVCSEPYSAKLSREHNNTN ILAFGSRVVGAELAKMIVQNWLDAEFEGGRHAKRVEMIARIEDEND" misc_feature 766351..766791 /locus_tag="lmo0736" /note="Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]; Region: RpiB; COG0698" /db_xref="CDD:440462" regulatory 766797..766802 /regulatory_class="ribosome_binding_site" gene 766810..767742 /locus_tag="lmo0737" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985544" CDS 766810..767742 /locus_tag="lmo0737" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0737" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464264.1" /db_xref="GeneID:985544" /translation="MEQEVTRLISASKQDFEKMNGRDLKRSIFQSEGRVIMAQHLLFA SQGLVRGVTNTELLAAFGSDMIMLNTFNLEDEKSNLGLQGLTLEDLKKRVNIPLGIYL GCPGENKTSENIIYDAAGMLATDEHLLRAKEIGADFIVLGGNPGSGTSIQDIIETTKR ARKLLGNDVLIFAGKWEDGIDEKVLGDPLAKQDAKEVIKQLIDAGADVIDLPAPGSRH GISVRMIQELVQFIHLYKPGTLAMTFLNSSVEGADQDTIRLIALMMKETGADIHAIGD GGFSGCTTPENVMQLSISLKGKPYTYFRMASRNR" misc_feature <767380..>767661 /locus_tag="lmo0737" /note="A large family of domains similar to triose phosphate isomerase (TIM) which, in general, share an eight beta/alpha closed barrel structure; Region: TIM-like beta/alpha barrel domains; cl21457" /db_xref="CDD:473867" regulatory 767753..767758 /regulatory_class="ribosome_binding_site" gene 767766..769619 /locus_tag="lmo0738" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985543" CDS 767766..769619 /locus_tag="lmo0738" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS beta-glucoside transporter subunit IIABC" /protein_id="NP_464265.1" /db_xref="GeneID:985543" /translation="MDYQKLAKEILANVGGEENVRSVVHCATRLRFKLVNKEKADKKQ IESISGVISVVENAGQLQVIIGNTVGDVYKALGSFTKLTDDGDSEIAKGTKDSDGNFL SKAIDVISGIFTPILGALAGGGMLKGLLMILTTFGWLTESSGTYQILYAAADSVFYFL PLILAYTAARKFGANPPVAIAAAGALVYPTMINLFNEGAHITFLQIPVVLMSYSFSVI PIILAVWFLSILERFLNSKIHEAAKTFLTPMICLMLIVPLTFLAFGPLGTFISQGLAS GYTFIYNLSPIVAGAFMGAFWQVLVIFGIHWGFVPIMINNLSRYGRDTMIAMVGPSNF AQAGASLGVFLKTKKPEVKAIAGSAALTGFFGITEPSIYGVTLKYKKPFVIASIAGAI GGAIVGAAGSSGAANAIPGILTLPIFIGKGFVGFILGIAVAYILSAIGTYFFGYKDEM ADGIAPTTKEAKETGVEAEVIVSPIRGNIVPLNEVKDEAFSAGLLGKGVAIVPQEGKL ISPVNGTIETAFPTGHAIGIRSDKGVEILLHVGFDTVQLNGKYFKLLVAQGDRVLVGQ ALLEFDLEAIKADGYDITTPIVVTNTDAYLDVLISDQKTVNYEDTLLTPVL" misc_feature 767772..769607 /locus_tag="lmo0738" /note="PTS system, beta-glucoside-specific IIABC component; Region: PTS-II-ABC-beta; TIGR01995" /db_xref="CDD:273919" regulatory 769626..769631 /regulatory_class="ribosome_binding_site" gene 769639..771012 /locus_tag="lmo0739" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985542" CDS 769639..771012 /locus_tag="lmo0739" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="6-phospho-beta-glucosidase" /protein_id="NP_464266.1" /db_xref="GeneID:985542" /translation="MFNLQKGFPENFKWGSSTNAQQFEGGYKEGGKGLSIADVRVIPD MPDESDFESFKTASDHYHHYKEDIAYYGEMGFQIYRFTMAWSRIFPNGDETEPNDAGV EFYSNMLAELEKYNIEPVVTLYAYDMPLQLLEKYNGWLDRAIIKDYLHYVETVVKLFK GRVKYWVPFNEQNFISIDSEYMSGYRAKNKAEVFQIQHHFNLCYAEATKLVHQIDPDA KVGGNIGNICPYPMTCKPEDVEASDKVAQQLGYAYGDIYFRGYYPKYFLKEYEGVDFE QIILDDDLTIIKSSEPDFMSLTYYMSSAIEAKGEEEVVVMNGIKAPNPYCETTEWGWT IDPYGFKHYLQEFYHRYQLPILILENGMGARDEKNTDDTIDDTYRIDYLASHIARMQE AVEEGCEIIGYLTWSATDLYSTREGFEKRYGFVYVDKDNSYKRLKKKSFYWYKKVIET NGNDLNY" misc_feature 769654..770985 /locus_tag="lmo0739" /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase [Carbohydrate transport and metabolism]; Region: BglB; COG2723" /db_xref="CDD:442035" gene complement(771026..771685) /locus_tag="lmo0740" /db_xref="GeneID:985541" CDS complement(771026..771685) /locus_tag="lmo0740" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464267.1" /db_xref="GeneID:985541" /translation="MPEKLDTVLGYLKEFPDYYKYVTKKTYTLNEKIIFEDEKAKSIF FIVEGYAAVELEDNLRKTNYISIFVLPYNVLGIDAFSSYPKKKHSITVMSESLMLYKI DADFLLNILSIKPDVNDFLLTSIADVFARHYALLGMIAKTPKERIYMALENLAVEMGT EDEERNEIVLPNFINQSVLARYCRTTQPNISNLLTELVEEEFLINKKSPYRIDKDSLD I" misc_feature complement(771035..771619) /locus_tag="lmo0740" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" regulatory 771041..771074 /regulatory_class="terminator" regulatory complement(771693..771698) /regulatory_class="ribosome_binding_site" regulatory 771938..771943 /regulatory_class="ribosome_binding_site" gene 771949..772326 /locus_tag="lmo0741" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985539" CDS 771949..772326 /locus_tag="lmo0741" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="NP_464268.1" /db_xref="GeneID:985539" /translation="MKFDDSKPIYKQIVHYIHTEIVTGTYEAGDKLLSVRELATKLEV NPTTIQRAYAELEETEIIYTVRGTGKYLTEDKRRIEQLENDIAKQLTENFISEMSKLG INKEKIIAWVKKVEEVEVNVSGK" misc_feature 771949..772281 /locus_tag="lmo0741" /note="DNA-binding transcriptional regulator YhcF, GntR family [Transcription]; Region: YhcF; COG1725" /db_xref="CDD:441331" regulatory 772295..772300 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0741" gene 772310..772999 /locus_tag="lmo0742" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985536" CDS 772310..772999 /locus_tag="lmo0742" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_464269.1" /db_xref="GeneID:985536" /translation="MLVGNNIAKSYPNKLVLQNVDFEAKSGDMIVLTGENGSGKTTLL DMLASLKKPDSGTLELDNELFTTNDIRQQIAYLNNELYAKKSTTIEDFMKQHGLLFEN IELDKWDRLLAGWRINKRLKLGELSTGMLMKVKIGSVLARKAKLYLYDEPFASIDIMA RSEVMKAIISETNPDAITIISSHHLEGTEKLYSKLWLIKDNTLQTIETETYREETGNA LIDFYKEEMNK" misc_feature 772310..772987 /locus_tag="lmo0742" /note="ABC-type Na+ transport system, ATPase component NatA [Energy production and conversion, Inorganic ion transport and metabolism]; Region: NatA; COG4555" /db_xref="CDD:443618" regulatory 772980..772985 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0742" gene 772996..773700 /locus_tag="lmo0743" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985534" CDS 772996..773700 /locus_tag="lmo0743" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0743" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464270.1" /db_xref="GeneID:985534" /translation="MTKMITFYLKQISPILLIGLAIILGLNFLGFTMNLLEGTDLLFR AIRGTTVISLILVLITTWKITKLDTSKENVTLASLSRFSETKKFFGKLFAAYLSAITV ILLQSAFIWYYGFETGRIEAGDALSFVSGTLMMFLFIAMFVCYFVIPVGWLKDHVKAS SLQKAAVILLLFAILIVNLLAEYYLHIYNSAGIISILPNGHFDISLLSIIWNVGLCSV IAGSYIYMKSKKMDTI" regulatory 773702..773707 /regulatory_class="ribosome_binding_site" gene 773715..775715 /locus_tag="lmo0744" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985533" CDS 773715..775715 /locus_tag="lmo0744" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_464271.1" /db_xref="GeneID:985533" /translation="MLEVKHLKKSYKLGKKNETPVLKDINVTIQDGEFAAIIGKSGSG KSTLLNIISGLDTDYEGKVLYNGEDLQDIDLDAYHFNHIGFIFQSFHLVNHMSVVENV KVPLYLNPELSESDRNARALDLLKQVGLEDFASKKPTQLSGGQKQRVAIARSLANNPD MIIADEPTGALDSVTSDEIIKLLKALAAKGTTVIVVTHDLNIADQTDAVLRLADGEVI SFERKKEVVQKVTHKNEKKLRLNWWATAKISFKSFFNRKFRNLLVALGTSIGIIAILL AFGLGNGVNQSLSKIFGTTFSPNQITTYYKEDGGSKSPEPTTPLTSSEIKKIKQLYED ENITEIYERTTVQGIKFEYDGEYLKGISGEMQEANFKPSRYEDLTVKDEYLLSGKMVT SDETGAVIPSSVAKAILGKKDSDELTKSDGDKLIGKKITLVYAGRNSDTKNTVKTETT ISGITNPSKEGFARGFDVSTKTMNDFIKTTGIEKPILSVDAFTKTTAEAEEIVEKYED NKDWANYSITNANAFVDTFSQFTDIIVYLIAFIAGLSLAVAGVMIAIVLYIGVVERTR EIGVFRAIGYRKRHIRGLFMMEASYIIILANVLSSLVAVTIAKIASPILETKIGFEDM IHISFWNFLVTLAITITIGFIFSIYPSNKAAKLDAAEALRSE" misc_feature 773715..775712 /locus_tag="lmo0744" /note="macrolide ABC transporter ATP-binding protein/permease MacB; Region: PRK10535" /db_xref="CDD:182528" misc_feature 773715..774380 /locus_tag="lmo0744" /note="ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]; Region: LolD; COG1136" /db_xref="CDD:440751" regulatory 775730..775735 /regulatory_class="ribosome_binding_site" gene 775744..776247 /locus_tag="lmo0745" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985532" CDS 775744..776247 /locus_tag="lmo0745" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0745" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464272.1" /db_xref="GeneID:985532" /translation="MKKPLKISLIVVGIAVVIFAGVMLSYRFVKSMDVTENAEINKSA TGDHVLLATQGSKFKDSVMDQVKKDMEGKNVHVSIIDTTKLDKVKADDYDKVVLFTTV QSDDIPENVSTFMNDNKDKSIHIAVTADSGRWDDKPKDIDAISEASKAENKQDFVDDL TKAIVAE" regulatory 776239..776286 /regulatory_class="terminator" gene complement(776398..776697) /locus_tag="lmo0746" /db_xref="GeneID:985530" CDS complement(776398..776697) /locus_tag="lmo0746" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464273.1" /db_xref="GeneID:985530" /translation="MKYCCISIIIIICYYFTNEKTKLDFGISTTTIVEEVKKNREDYS TLLNKLAEKELKGITTLRNFRLLVSSIFLIIVILLIAITYLAKKRQRITEDFIAN" regulatory 776747..776753 /regulatory_class="ribosome_binding_site" gene 776761..777102 /locus_tag="lmo0747" /db_xref="GeneID:985529" CDS 776761..777102 /locus_tag="lmo0747" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0747" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464274.1" /db_xref="GeneID:985529" /translation="MYQSLSNIIINLQANKDLLLQQDNEVDRIKSILPLVVARNSIIE TLGRNPVWGISLTDDVNNLKIDNQLVTEVIPFDWNNETLYLCYFSDLESSNSPSEMGI SFQLVNIFSLS" regulatory 777196..777201 /regulatory_class="ribosome_binding_site" gene 777209..777496 /locus_tag="lmo0748" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985528" CDS 777209..777496 /locus_tag="lmo0748" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0748" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464275.1" /db_xref="GeneID:985528" /translation="MEMNASFIGLYAITVYYLYGYLEKRERLEWLLLLPVLMALTITI TNTNAYYENIVTNPLEQNIVSFIASFIILAVCLTIPVSIVLFFRKRKGEVQ" regulatory 777481..777487 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0748" gene 777493..777699 /locus_tag="lmo0749" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985526" CDS 777493..777699 /locus_tag="lmo0749" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0749" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464276.1" /db_xref="GeneID:985526" /translation="MKNINMKVARVEKDISQEELAKLIHVSRQTISSVEAGNYNPTLN LCIAICKALGKTLDDLFWEEDDNV" misc_feature 777493..777687 /locus_tag="lmo0749" /note="DNA-binding transcriptional regulator, XRE-family HTH domain [Transcription]; Region: XRE; COG1476" /db_xref="CDD:441085" regulatory 777677..777682 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0749" gene 777692..778207 /locus_tag="lmo0750" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985524" CDS 777692..778207 /locus_tag="lmo0750" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0750" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464277.1" /db_xref="GeneID:985524" /translation="MFKNLFKKPKMKDEMLEMKQNQYGARAFNMMIIIVAIVILIKAV VLEASISELWVELLLLIVGGGYYFYSVLKNNVPFMPTISLKQTIRLVFLISAIFGISV GIRNVFFLYADNMSGTELSYQMMMFFFISLFTAIGSGVIFGALAYCLYQLSKWQEKNI MKKIEVENAED" misc_feature 777710..778180 /locus_tag="lmo0750" /note="Family of unknown function (DUF6773); Region: DUF6773; pfam20563" /db_xref="CDD:466712" gene 778262..778558 /locus_tag="lmo0751" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985522" CDS 778262..778558 /locus_tag="lmo0751" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0751" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464278.1" /db_xref="GeneID:985522" /translation="MDIAKWFDNAELYSISQVLKENAARFEDDCIGIIFPCYNFAASR MVCEFIERIQLVSQYIFVIVTYSNTAPMCASTELYEHFLMSTYHLVGVFWKINP" misc_feature 778265..>778459 /locus_tag="lmo0751" /note="EFR1 family ferrodoxin; Region: ferrodoxin_EFR1; NF038196" /db_xref="CDD:468407" regulatory 778640..778645 /regulatory_class="ribosome_binding_site" gene 778654..779490 /locus_tag="lmo0752" /db_xref="GeneID:985519" CDS 778654..779490 /locus_tag="lmo0752" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464279.1" /db_xref="GeneID:985519" /translation="MSVLNIEGAKLSYQKVGQGPILIFIPGANGTGDIFLPLAEQLKT SFSVVMVDRRGYGDSELTAAIPERASHAYDDYRVTRDAADIAALAKALSDVPVYILGS SSGSIVAMHVLKNHPEVVKKIAFHEPPINTFLPDSEMWQEANEKIVQTALTKNMAEAM QLFGETLHIAPIDAESMSKPAVTIDEVTKDSTTQQMKYWFTYEIRQYTSSNISLDDFK PYVHQITLLNGTDSKGSFPQDVNAFIAKQLGLTIVDIPGGHLGYIQKPAGFAKVLLSI WG" misc_feature 778663..779475 /locus_tag="lmo0752" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" regulatory 779501..779538 /regulatory_class="terminator" regulatory 779601..779606 /regulatory_class="ribosome_binding_site" gene 779616..780296 /locus_tag="lmo0753" /db_xref="GeneID:985518" CDS 779616..780296 /locus_tag="lmo0753" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Crp/Fnr family transcriptional regulator" /protein_id="NP_464280.1" /db_xref="GeneID:985518" /translation="MNIRTELQNSQLCEGITEAQLTELMNKITVKEKHYKNNEILFYT DEVTKVYILVKGNAAIAKNTSSGKRILGKNVTEPGELAGEIYYFSHRNPFWDYAIVLE PTTVLEISGIDQGTLQTLDLALQNQLLVNLLKSVTRKFEYIGEKVRMVSEDSVRAKIS NYLFGIQDDDGSIELTETREEIADYLDITRPSLSRELGRMQKENIIRIEGSSVIILDA IIFDTFIE" misc_feature 779652..780266 /locus_tag="lmo0753" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" regulatory 780364..780369 /regulatory_class="ribosome_binding_site" gene 780377..780988 /locus_tag="lmo0754" /db_xref="GeneID:985517" CDS 780377..780988 /locus_tag="lmo0754" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464281.1" /db_xref="GeneID:985517" /translation="MLLTRNEPFTAEKIQAKADILELVQFERFCRDNALWDAMETCFT KDSNVKISWFQGTGHGFIEASKKMTNPAPHKIYNTQVWIKNDRAVAIMQATIQTRTII NGVEMELNSDAKLVTRVERIDGKWYINAFEGVYEKDSLMPVVPSKNADVPAELLANFR KSYACLALSLTLNGYEIDNNLPGIDRPEQVTQFFKEADEWLLQ" misc_feature 780422..780760 /locus_tag="lmo0754" /note="Nuclear transport factor 2 (NTF2-like) superfamily. This family includes members of the NTF2 family, Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases, and the beta subunit of Ring hydroxylating dioxygenases. This family is a classic example of...; Region: NTF2_like; cl09109" /db_xref="CDD:471850" regulatory 780997..781033 /regulatory_class="terminator" regulatory 781091..781096 /regulatory_class="ribosome_binding_site" gene 781103..781924 /locus_tag="lmo0755" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985516" CDS 781103..781924 /locus_tag="lmo0755" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464282.1" /db_xref="GeneID:985516" /translation="MKKSKTVQILLVFSVVALILSMVGVVSIWYGQKNHQTNNAKTTA KKETTVTKKQDTFKITALGDSLTYGVGDTEGGGYVRVVENFYKQKEKNVENVNLAISG AKSDQLLKQLDQKEVQNQIKSADVILMTIGGNDLFRGGEALDDFKSDAIKQAEASYTS NLKQIYQTIRNLNPSAPVFHIGLYNPFMSLENASEMSAVANEWNMQSQNLSQNEKNII YVPTFDLFQQNGDAYLATDKFHPNHAGYQFIGNRVAEVIETGGGEGDDGASTSSN" misc_feature 781274..781870 /locus_tag="lmo0755" /note="Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely...; Region: SGNH_hydrolase_YpmR_like; cd04506" /db_xref="CDD:239947" misc_feature order(781295..781297,781406..781408,781502..781504, 781811..781813,781820..781822) /locus_tag="lmo0755" /note="active site" /db_xref="CDD:239947" misc_feature order(781295..781297,781811..781813,781820..781822) /locus_tag="lmo0755" /note="catalytic triad [active]" /db_xref="CDD:239947" misc_feature order(781295..781297,781406..781408,781502..781504) /locus_tag="lmo0755" /note="oxyanion hole [active]" /db_xref="CDD:239947" regulatory 781882..781887 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0755" gene 781896..782801 /locus_tag="lmo0756" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985514" CDS 781896..782801 /locus_tag="lmo0756" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_464283.1" /db_xref="GeneID:985514" /translation="MTERALQVTNLHKKIRKREIIKGISFEVMPGEVFGFLGPNGAGK TTTIRMIVGLIKPTSGTILIGGKDIRKNFTEAMRGLGSIVENPEFYTFLTGQENLAYF ARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQALLSNPKLLILDEP TNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAIMTDGTIIKTDQV AHLLSSRAQLRWRVTPIEQAKAFLESVTEVEVDGEYLVTAMNEESAEWNEQLVAKGIK VHEIDKRKPSLEDLFLELTGGQSID" misc_feature 781911..782567 /locus_tag="lmo0756" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" regulatory 782780..782785 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0756" gene 782794..783774 /locus_tag="lmo0757" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985511" CDS 782794..783774 /locus_tag="lmo0757" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464284.1" /db_xref="GeneID:985511" /translation="MINLVYNEQLKLWRKKRLIVILALVAIIVAIFTYAQFRQHQEDE KQAGTSDWHVQTQQQIVDLENRLGTGRLPEEYQKYFKVLVGQLQYYLDHDINPNAPGA PTFLKTFVENGISLLFPLFIMVIAADLISAETSAGTMKFLLTRPVKRWRILTSKYVSM LLSISAIMVLSAVIAYLISGIVFGYGGWDAPVLTGFGMKDGAVTTTDVYQLPVWQLLL MEFGLAWFVSVVVGVLTMFVSVLVRSTAAVMGIMLASLITGTILTNLVSSWPSAKYLF MVNLQLTNYLNGSSPPVEGMTLSFSMLVLTAWMLVAFILSYFIFTKRDVY" misc_feature 783058..783579 /locus_tag="lmo0757" /note="ABC-type transport system involved in multi-copper enzyme maturation, permease component [Posttranslational modification, protein turnover, chaperones]; Region: NosY; COG1277" /db_xref="CDD:440888" regulatory 783776..783804 /regulatory_class="terminator" regulatory 783886..783891 /regulatory_class="ribosome_binding_site" gene 783901..784788 /locus_tag="lmo0758" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985508" CDS 783901..784788 /locus_tag="lmo0758" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0758" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464285.1" /db_xref="GeneID:985508" /translation="MIKGIHHVSALTKSFSENHHFYSEILGLRLVKNTVNQDNIHMRH LFYGDYIGSPGTLLTFFEVPRIGSSYDERAFFGKMTLGIPTDTSSYWEKRLNDFAISF QKDGQTLTLQDPDTMGIILTEIPATNSNPTIHTNIPAEKQLVRIIGADYHVPDPAATS RFFTNLFELESQDGVLVDKSEMSFAKLHATTSDKKSRTGRGTIDHIAYTLETKEAVDE LHDLAVRNDLKIEEFVDREYFKSLYIREPGGLRIEFASAGPGFTIDEPLETMGERLAL PSFLEEKRTEIETYFGGDL" misc_feature 783910..784272 /locus_tag="lmo0758" /note="vicinal oxygen chelate (VOC) family; Region: VOC; cl14632" /db_xref="CDD:472697" misc_feature 784354..784764 /locus_tag="lmo0758" /note="vicinal oxygen chelate (VOC) family; Region: VOC; cl14632" /db_xref="CDD:472697" regulatory 784773..784778 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0758" gene 784788..785747 /locus_tag="lmo0759" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985503" CDS 784788..785747 /locus_tag="lmo0759" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0759" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464286.1" /db_xref="GeneID:985503" /translation="MIKDLKGIHHVTAMTSSAEKNYAFFTEVLGMRLVKKTVNQDDIH TYHLFFADDKGSAGTDMTFFDFPNLPKGRHGTDSISRVAFRVPSDAALEYWLDRFEQL EVPHSDIKTLFGKKYLTFQDFDDQQLQLISDENNEGVAPGTPWKNGPVPEKYAIYGLG PVFLTVVSLKNMDAILQTIFGFRKVTEEDGLHLYEVGEGGNGAQVIVEERTDIPAAMQ GYGGVHHVAFRVEDHEELQKWIDRMNTIEAPNSGYVNRFYFESLYVPVSERILFEFAT DGPGFASDEPYETLGEKLALPPFLEPKRAEIEKMVRPINTKRS" misc_feature 784806..785180 /locus_tag="lmo0759" /note="vicinal oxygen chelate (VOC) family; Region: VOC; cl14632" /db_xref="CDD:472697" misc_feature 785259..785729 /locus_tag="lmo0759" /note="C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins; Region: PcpA_C_like; cd08347" /db_xref="CDD:319935" regulatory 785739..785744 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0759" gene 785754..786362 /locus_tag="lmo0760" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985499" CDS 785754..786362 /locus_tag="lmo0760" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0760" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464287.1" /db_xref="GeneID:985499" /translation="MEHIYIPGKNKDLAPLLLLHGTGGDEKSLVEVAEFIAGDAAVLS LRGDIKEGGANRFFKRFHDGSLDLEDLESKTSELITTTRELAKKYQLDFERIIAVGYS NGANIAANALLQAENSFHKAILFHAMPAGNKQPEFSISHRSVFLSAGLNDPLITAKAS EELVEILKQRGANVETVWTAAGHSLTMEELEEAKKWYQNNQK" misc_feature 785799..786350 /locus_tag="lmo0760" /note="Predicted esterase [General function prediction only]; Region: YpfH; COG0400" /db_xref="CDD:440169" regulatory 786359..786364 /regulatory_class="ribosome_binding_site" gene 786372..786992 /locus_tag="lmo0761" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985498" CDS 786372..786992 /locus_tag="lmo0761" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464288.1" /db_xref="GeneID:985498" /translation="MTIFKSADLSQKENYKFLTGSIIPRPIAFVTTLAEDGVTVNAAP FSFFNVVSSDPAIVSIAVQRADGEQKDTARNAAFTKELNIHIVSESFVEEMNKTAARL APDVSEIEKTSLHLEQVPGMKTPKISEANIVLTSKLEQIIPIKNDAGEVVSDLILARI LTYDFADEVFDSEHHYILPEKLAPVARLAGNDYTKLGDIFRIERPN" misc_feature 786402..786878 /locus_tag="lmo0761" /note="FMN reductase RutF, DIM6/NTAB family [Energy production and conversion]; Region: RutF; COG1853" /db_xref="CDD:441458" regulatory 786478..786504 /regulatory_class="terminator" /locus_tag="lmo0761" regulatory 787305..787310 /regulatory_class="ribosome_binding_site" gene 787320..788576 /locus_tag="lmo0762" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985496" CDS 787320..788576 /locus_tag="lmo0762" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP/GTP-binding protein" /protein_id="NP_464289.1" /db_xref="GeneID:985496" /translation="MEKKVLIVGISQKQKDFDYSMEELANLAAANNMEVVGEIRQNID RENRATYVGKGKVDEIKGLAEMQDARLIIFNDELSPSQIRNLEEALELDVMDRTGLIL AIFANRAKTKEAQLQVQIAKLQYELPRIFGQGEDMDQQSGKGGLSNRGSGEKKIETDR RTIKHQIRHLQKELDMLVDDREVRRRKRKKNEIPVVSLVGYTNAGKSTTMNGLVRAYS ETADKQVFEKDMLFATLETSVREIVLPDNKQFLLTDTVGFVSKLPHQLVKAFRSTLEE ARDADLLIHVVDYSDPHYKTMMKTTEETLKVVGVEDVPVIYAYNKADLLEDEMYPKQT GNTIIFSAREEESLEFLTEVIRKELFASYEKATFLIPFEAGQVVAYLNEHADILETEY LENGTQIVAEVSPADLQKLAEYQVAE" misc_feature 787326..788570 /locus_tag="lmo0762" /note="50S ribosomal subunit-associated GTPase HflX [Translation, ribosomal structure and biogenesis]; Region: HflX; COG2262" /db_xref="CDD:441863" regulatory 788627..788632 /regulatory_class="ribosome_binding_site" gene 788642..789514 /locus_tag="lmo0763" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985495" CDS 788642..789514 /locus_tag="lmo0763" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464290.1" /db_xref="GeneID:985495" /translation="MKKTGWGILGAVAAFTGYAYWSTKHLTVTNYEIVSDKIPAEWDG ATFIQLSDLHSASFGLYNNPLLSIVNELAPDAVFLTGDMIDGDESPYVAMAVVRKLAK EFPVFYVSGNHEGRSAFYEDFKADMEKHHVAVLENERYFLKKDGAAIMVAGVQDPRFV KENWAEKELPKEEWEEAALKEALDDATANLSSDYFTILLAHRPEFWPLYQAYPIDLVL SGHAHGGQFRLPLTEGLFAPGQGFMPKWTAGIHRAGGKALVVSRGLGNVTKLPRLFND PEVIRITLKAKGDA" misc_feature 788651..789502 /locus_tag="lmo0763" /note="Predicted phosphohydrolase, MPP superfamily [General function prediction only]; Region: YaeI; COG1408" /db_xref="CDD:441018" regulatory 789504..789509 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0763" gene 789520..790509 /locus_tag="lmo0764" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985491" CDS 789520..790509 /locus_tag="lmo0764" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="lipoate-protein ligase" /protein_id="NP_464291.1" /db_xref="GeneID:985491" /translation="MIYLDNEDVLDQAYNFAMEEYALRSLDENETYFMFYRMKPTIIV GKNQNTLEEINHPFVKDHHIDVLRRLSGGGAVYNDEGNISFSMITKDDGNSFQNFAKF TEPVIRALRKLGVNAELSGRNDIEVNGKKISGNAQFATKGRLYSHGTLLFDVDLSMLE KALQVDPEKYLSKGVKSVRSRVTTIREHLAEDIDILTFKQILLESIFETKDIPRYTFT EADKQGIEKLRTERYRNWDWTYGKSPKATIKRKKRFPAGTIEFQVSLEKGQVKEATIY GDFFGTEDVAELAEKIIGCRFERKSIQNAWQEINAKDYFGGIEKEAILDMLFE" misc_feature 789526..790482 /locus_tag="lmo0764" /note="biotin-lipoate ligase family; Region: BPL_LplA_LipB; cl14057" /db_xref="CDD:449326" misc_feature order(789625..789627,789724..789726,789739..789753, 789763..789765,789769..789771,789883..789885, 789910..789924,789958..789966,789970..789972) /locus_tag="lmo0764" /note="active site" /db_xref="CDD:319742" regulatory 790519..790552 /regulatory_class="terminator" regulatory 790649..790654 /regulatory_class="ribosome_binding_site" gene 790662..791960 /locus_tag="lmo0765" /db_xref="GeneID:985489" CDS 790662..791960 /locus_tag="lmo0765" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0765" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464292.1" /db_xref="GeneID:985489" /translation="MVIENRDFIQISTEKIKKEINNQKLVEMYKRCMENTLDTTIKIR DSGLTFILTGDIPAMWLRDSVCQVRPFLIFAKENEEIESMLIGLSKEQVSLVEIDPYA NAFNETPNGAGHQADKTEMHPQVWERKYEIDSLCYPIQLAYLIWKITGRTEQFDAAFF KMLQTIFALWEVEQHHETKSPYRFERLDCVPSDTLKRNGLGTETAYTGMLWSGFRPSD DACEYGYLIPSNMFAVVVLGYAKEIIEAFYPSEIETIKQAATLQNDIQLGIEKFGTYN HPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPIIEYLEKESPIYQNTRKFILSKSNP YYFEGKLAKGIGSPHTPAGYIWPIGLAIQGLTASDKSEKLEILQMLLRTDAGTGLMHE SFHPDYPEDFTREWFSWANMMFCELVLDVAGFRMANVLKN" misc_feature 790701..791954 /locus_tag="lmo0765" /note="Meiotically up-regulated gene 157 (Mug157) protein (function unknown) [Function unknown]; Region: COG3538" /db_xref="CDD:442759" regulatory 791964..791969 /regulatory_class="ribosome_binding_site" gene 791977..792867 /locus_tag="lmo0766" /db_xref="GeneID:985488" CDS 791977..792867 /locus_tag="lmo0766" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_464293.1" /db_xref="GeneID:985488" /translation="MATIRNKSAQIHQQRMAYLFIALPVLLLAIFMILPIGMALFVSF TDYDIVNSPNWIGFDNYIKMFRDPYFLISLKNTIIYTALFVPLGLVASLGAAILINMN KKGAGLFRTFFYVPVLCSTVATATIWYWLLNPQYGLINRVLGWFGINGPAWLYDSNWA MFAIVMMSVWMTFGTNMMIFLAGLQGIPANLYEASKIEGASRWKTFRYVTWPSLSRTT FLVTTMLIINAFQVFDQAYVLTKGGPGNSTITLVYYIYNEGFGGLKMGYASAISFVLF LIILVFSIINMRVNKEDRTA" misc_feature 791980..792858 /locus_tag="lmo0766" /note="ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpA; COG1175" /db_xref="CDD:440788" regulatory 792867..792872 /regulatory_class="ribosome_binding_site" gene 792879..793754 /locus_tag="lmo0767" /db_xref="GeneID:985486" CDS 792879..793754 /locus_tag="lmo0767" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_464294.1" /db_xref="GeneID:985486" /translation="MNTIKLKKGSKSFIWYIAVLLISLVTVFPLIWTVSTSFKPTSEI LSNSMNLIPKMFTWDNYKDVFSTTPFARYLVNSLILAVGGVLTNLFFGSLAGYAFAKL PFKGKKGLFMTFLGSMMIPAVVTMIPSFLVLKNFPLMGGNDITGHGGMGFINTYWAIL IPGAAGAFSIFFMKQFFETLPDELSEAARIDGCSEFKIFWKIYMPLAKTALATLGIMT FQAGWNQFMWPLIVLNSQKMMTVQVGLASFQYNESANYGALMAGTIVSTIPVLFVFIF AQKYFVEGIAHSGGK" misc_feature 792885..793751 /locus_tag="lmo0767" /note="ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpE; COG0395" /db_xref="CDD:440164" regulatory 793764..793769 /regulatory_class="ribosome_binding_site" gene 793777..795030 /locus_tag="lmo0768" /db_xref="GeneID:985485" CDS 793777..795030 /locus_tag="lmo0768" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter substrate-binding protein" /protein_id="NP_464295.1" /db_xref="GeneID:985485" /translation="MKKVLLAILSMVLLLSLAACGGSSDSSKDKNGKEEIVMWGSWSG DQIKQLEKQIDSYNKSQDKYKVKYVMQENVEEKLLTGIAGGELPDIIMWDRYQTALYA PKGVLEPLDKLVKEDNLKMDDFYEESVKEMTYSDKLYGLPLLNDNRILFYNKKLLQEA GVKPPTTWDELATAAQKTTKWDGNKMTQAGMSLQDVGLFNLYLMQAGGELVTSDNKET AFNSEQGLEVLNYWDKMQNDLKVYQRGFDDGSDAFAAGKEAMTYNGPWALADYNKVED LDYGVVEPPKGPNGDKGAIMGGFGLVMPKQAEHKDGAWDFMKWWTTKPENGVEFAKIS GWLPANKIAAEDEYFTKDPNYSVFVNTMKYAKIRPTVAGYADVEGLAMKPQFEKFMNG NISAEKALSQAEKEGNQILKEERDK" misc_feature 793777..>793878 /locus_tag="lmo0768" /note="ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]; Region: NlpA; COG1464" /db_xref="CDD:441073" misc_feature 793879..794994 /locus_tag="lmo0768" /note="The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold; Region: PBP2_UgpB; cd14748" /db_xref="CDD:270451" misc_feature order(793996..793998,794056..794061,794206..794208, 794212..794214,794566..794568,794665..794670, 794782..794784,794911..794913) /locus_tag="lmo0768" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270451" regulatory 795018..795023 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0768" gene 795034..796062 /locus_tag="lmo0769" /db_xref="GeneID:985482" CDS 795034..796062 /locus_tag="lmo0769" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alpha-1,6-mannanase" /protein_id="NP_464296.1" /db_xref="GeneID:985482" /translation="MKWSEYANLAQLSLEKFYLADTKEQFLNNFYPTENPEEDNKVFN YWWLAHLVEVRLDAYLRTKKQADLEIAENTYMHNKNRNGETLIHDFYDDMLWNALAAY RLYKETGKPIYLEDAQLVWQDLVDTGWNNIMGGGFAWRRPQMYYKNTPVNAPFIILSC WLYNELNETKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGAIDYEWKFTYNQGVY IGANLELYRITKEAKYLDTANKTADTSLKELTEDGIFKDEGSGGDEGLFKGIFYRYFT DLIEETADKTYRDFVLNSCQILVESAKVDGYLLMGMNWKEKPSGKIPYSAELSGMIAL EMAAKLER" misc_feature 795040..796059 /locus_tag="lmo0769" /note="Predicted alpha-1,6-mannanase, GH76 family [Carbohydrate transport and metabolism]; Region: COG4833" /db_xref="CDD:443861" regulatory complement(796059..796090) /regulatory_class="terminator" regulatory 796068..796099 /regulatory_class="terminator" gene complement(796075..797193) /locus_tag="lmo0770" /db_xref="GeneID:985481" CDS complement(796075..797193) /locus_tag="lmo0770" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="NP_464297.1" /db_xref="GeneID:985481" /translation="MKKLLYQKVYDQLKLSIQEGKIPVGSKMPAENELMAQFDVSSIT LKKALELLKKDGYISRRPRVGTFVINASPVSEQIETRMFDKPLFGCIMTNFDDTFGTT LLSGMLEHSDSKAHIIVKKSLGDTEREEEILQEFIEMNVAGILILPASSKFVSPTLLE LASQKFPLVVIDRTLEGLPISSISSDNTEAGRIITEKLFELGHKHIGMITSTSPVSTL DSRVNGFIRGHASFHTAFHSDYVFREIESVMPNSTVSIQTDIDKIAHFLNTHSEITAL VATEYNIALLIKQACNKLGKSIPADLSVVCFDHPDNFFDTSAFQFTHIKQAQYEIGVK AVDMLLNQVLKPDTINKETLPPMLIEGDSVKMLKSTSK" misc_feature complement(796990..797181) /locus_tag="lmo0770" /note="Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; Region: WHTH_GntR; cd07377" /db_xref="CDD:153418" misc_feature complement(order(796996..797007,797011..797016, 797044..797046,797053..797058,797062..797076, 797098..797103,797107..797109,797176..797178)) /locus_tag="lmo0770" /note="DNA-binding site [nucleotide binding]; DNA binding site" /db_xref="CDD:153418" misc_feature complement(796117..796929) /locus_tag="lmo0770" /note="ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily; Region: PBP1_LacI_sugar_binding-like; cd06267" /db_xref="CDD:380491" misc_feature complement(order(796216..796218,796270..796272, 796432..796434,796531..796533,796639..796641, 796678..796680,796753..796755,796885..796887, 796894..796899)) /locus_tag="lmo0770" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:380491" misc_feature complement(order(796315..796320,796327..796329, 796339..796341,796423..796425,796774..796782, 796789..796791,796798..796800,796831..796833, 796837..796851,796867..796872,796876..796881, 796888..796896)) /locus_tag="lmo0770" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:380491" regulatory complement(797201..797206) /regulatory_class="ribosome_binding_site" regulatory 797337..797342 /regulatory_class="ribosome_binding_site" gene 797353..798105 /locus_tag="lmo0771" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985478" CDS 797353..798105 /locus_tag="lmo0771" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0771" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464298.1" /db_xref="GeneID:985478" /translation="MAIKKLNDFYFKKLGNWNLIHSFLKGFWRAFFFLLLLLLIADLI VMKFVNDRYFIPVILLSLLCIPLLYYILIYSRAKKFIRTRYQLRSFAELTTMRRYLLY AYLEKSGFSTRADLEKLIRFIHSEMAEEKKNYQPLSTVVGVFIAAFLAILGGTFLFLM DDVVERLIAAVLIMVMAILLFIVGTFIMSIIRSKSENNTKKERVLTKEIIAIQTAILV SENTSYHPFLAMERKIAENDFLKEIITSRSFL" regulatory 798128..798133 /regulatory_class="ribosome_binding_site" gene 798141..798788 /locus_tag="lmo0772" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985477" CDS 798141..798788 /locus_tag="lmo0772" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464299.1" /db_xref="GeneID:985477" /translation="MTTKRKETRESVCYREIKKKIRNGELKPGDRLIENTLSQQLEIS RTPIRKAIGMLAADGYVEYNDFRGAFVRDSIINKERYFEMTEIIGLFLKQAIQKIRTK KITFNKMRVVAKLVEIEREEPTDPGIYFEYEKWFVSDLLTYMKNNYYLKISDDFFNNI QEFGDEEVIKIAQNACVKTVANIQRFIDALDEQDYDKCMAIIDQVIDAHVLVAYR" misc_feature 798141..>798410 /locus_tag="lmo0772" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: GntR; COG1802" /db_xref="CDD:441407" regulatory complement(798782..798820) /regulatory_class="terminator" regulatory 798793..798831 /regulatory_class="terminator" gene complement(798828..799817) /locus_tag="lmo0773" /db_xref="GeneID:985473" CDS complement(798828..799817) /locus_tag="lmo0773" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase" /protein_id="NP_464300.1" /db_xref="GeneID:985473" /translation="MKSFQALFIEKEADNTSLHFRETTIDNLPENEVTIEVHYSGINY KDGLAVLPDGKIVSEYPFIPGIDASGVVVNSKSDQFQVGDEVIVTSYDFGVSYFGGYS EFIRVPAEWVVPLPDGLSLKEAMILGTAGFTAALSVDALEFSGVTPNAGKIAVSGATG GVGSLSSAILSKRGFSVVASSGKSDAKEFLEKFGVSEIVSREAFQPEKVRALDKQLYA GAIDCVGGKPLSYLLTAVQYGGAVTTCGMSAGGKLDTTVFPFILRGIQLFGIDSVLCP MSKRERIWNRLATDYKLTNLESLATEIAFSELPESLHQVMNGGVTGRYLVKVK" misc_feature complement(798834..799808) /locus_tag="lmo0773" /note="Yhfp putative quinone oxidoreductases; Region: MDR_yhfp_like; cd08289" /db_xref="CDD:176249" misc_feature complement(order(798858..798860,798873..798875, 798999..799010,799071..799085,799146..799151, 799215..799217,799269..799277,799332..799343, 799347..799349,799419..799421,799428..799433, 799686..799691)) /locus_tag="lmo0773" /note="putative NADP binding site [chemical binding]; other site" /db_xref="CDD:176249" misc_feature complement(order(798993..798998,799005..799025, 799032..799040,799044..799055,799059..799061, 799077..799088,799104..799106,799185..799187)) /locus_tag="lmo0773" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:176249" regulatory complement(799828..799833) /regulatory_class="ribosome_binding_site" regulatory 799984..799989 /regulatory_class="ribosome_binding_site" gene 799996..800925 /locus_tag="lmo0774" /db_xref="GeneID:985472" CDS 799996..800925 /locus_tag="lmo0774" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464301.1" /db_xref="GeneID:985472" /translation="MGKALLIVNPSSGKEKGKTYQGKTEEVLKKRYDEVEVRLTEKAG DATEFASWAAEQGFEAVIAMGGDGTLNETINGLAIHEKRPDFGFIPLGTVNDLARSVG IPLKPEKAIQALEKAIAVPMDVGRIGDQYFMNVLAIGMIAQAVDQVSVEQKTKFGSVA YFLEGLKAFNRNELLHFKIEYDEEVWEGEAALVVAGLTKSVGGMESWAPDAKIDDGYL HIIILTKLGLLDAANMIPQLIRGNLKNSDGVVYIKTKKLTIDASGDDLSINVDGDPGP GVPAEIEVLGSHLNILAPKKSSKKRFGPFILKK" misc_feature 799996..800883 /locus_tag="lmo0774" /note="Phosphatidylglycerol kinase, diacylglycerol kinase family [Lipid transport and metabolism, General function prediction only]; Region: LCB5; COG1597" /db_xref="CDD:441205" regulatory 800949..800954 /regulatory_class="ribosome_binding_site" gene 800965..801297 /locus_tag="lmo0775" /db_xref="GeneID:985469" CDS 800965..801297 /locus_tag="lmo0775" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0775" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464302.1" /db_xref="GeneID:985469" /translation="MEEELEVIHKGLANAKNGFKAVPGKLYLTATYIVHKPNDYFDEE INIPLNRVAKIRGVRTKILGKELLSNILEIDMISGVKYQFVVNKQKKWLEAVSEVLES RGESEKLG" regulatory 801301..801341 /regulatory_class="terminator" gene complement(801336..802202) /locus_tag="lmo0776" /db_xref="GeneID:985467" CDS complement(801336..802202) /locus_tag="lmo0776" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464303.1" /db_xref="GeneID:985467" /translation="MTILAFDLGGTAVKFGVLTTAGEILEKGKFKTPDTLEEMMQSLV DVKANYDYTFQGAAFSCPGAVNNETGIIGGASAIPYIHNFPFKQLLEEKLGLPVTMEN DANCAALAEVWIGAAKDKQDIIFMILGTGVGGAVIRGGKVHHGANLHGGEFGYMLMDR DGHTLSELGTVVNAATRIAGRLEVPKASIDGLRAFELRAEGNKIAKEELDTMFYYLAR SIFNLQYALDPELVVIGGGVSERADFIQELTEYVAKVKASVPIATISPTVVGCQFGND ANLIGATAFHLA" misc_feature complement(801357..802199) /locus_tag="lmo0776" /note="nucleotide-binding domain (NBD) of an uncharacterized subgroup of the ROK family; Region: ASKHA_NBD_ROK-like; cd24152" /db_xref="CDD:466988" regulatory complement(802210..802215) /regulatory_class="ribosome_binding_site" regulatory 802341..802346 /regulatory_class="ribosome_binding_site" gene 802356..802739 /locus_tag="lmo0777" /db_xref="GeneID:985466" CDS 802356..802739 /locus_tag="lmo0777" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0777" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464304.1" /db_xref="GeneID:985466" /translation="MEIKVQKKLTDGRIAFSSEYGECVGIWADEDPEPSRVYTVEITI PDMISAELLHESEEKHCALEIDEEGLVHVIGKLEDYEEDGFAVLRLEESIICFDTKFS EEIEMLHGRFVEFVIPEIKLSNVGI" regulatory 802753..802796 /regulatory_class="terminator" gene 802948..803031 /locus_tag="lmos29" /db_xref="GeneID:18245134" misc_RNA 802948..803031 /locus_tag="lmos29" /product="rli34" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245134" regulatory 803186..803192 /regulatory_class="ribosome_binding_site" gene 803201..803548 /locus_tag="lmo0778" /db_xref="GeneID:985465" CDS 803201..803548 /locus_tag="lmo0778" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0778" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464305.1" /db_xref="GeneID:985465" /translation="MKKKWLLLILSVIVLCAIIFGIKWLLYRDNLVEMMQVDDTLYIV SYEPAKQEDALEKIGEIEHRIRHYRIPNKNFTSNYLSEGTELYKAKNGDEFPRTILFK EDGEYFIASEAMK" regulatory 803599..803648 /regulatory_class="terminator" regulatory complement(803688..803740) /regulatory_class="terminator" gene complement(803745..804212) /locus_tag="lmo0779" /db_xref="GeneID:985463" CDS complement(803745..804212) /locus_tag="lmo0779" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0779" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464306.1" /db_xref="GeneID:985463" /translation="MVWDATNIFLFAANILTVLYILYNDAVIPLWKGKTVLSVKLRSR GRWDGYIFVGIIVLLFVSNTFFREGPFSTSVLLGIMGVLFIYICFFRSSKAVFKESGL FYALLFFPYAKIERMNLSEDGVLVIETNRQRLMLFARSEKDLEKMLAVFTTYS" misc_feature complement(803748..804200) /locus_tag="lmo0779" /note="hypothetical protein; Provisional; Region: PRK02913" /db_xref="CDD:179499" regulatory complement(804224..804228) /regulatory_class="ribosome_binding_site" regulatory 804368..804373 /regulatory_class="ribosome_binding_site" gene 804382..804729 /locus_tag="lmo0780" /db_xref="GeneID:985461" CDS 804382..804729 /locus_tag="lmo0780" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0780" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464307.1" /db_xref="GeneID:985461" /translation="MTEKDLEGLMLMHKRIIENLEEFSMPAKQQMEKLKGFVLTDELA SDFSDIALQYAKILFDHGWLTKEQLDMFLIVDKKLEGMSNNEDFWSDEALETSIEWAE CSKQGKAILKTFR" regulatory complement(804828..804862) /regulatory_class="terminator" gene complement(804887..805765) /locus_tag="lmo0781" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985460" CDS complement(804887..805765) /locus_tag="lmo0781" /experiment="EXISTENCE:[PMID:19448609]" /note="hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel" /codon_start=1 /transl_table=11 /product="PTS mannose transporter subunit IID" /protein_id="NP_464308.1" /db_xref="GeneID:985460" /translation="MSEQITVNEKKITKSDLMGVFIRSNLFQGSWNFERMQSLGFCFS VIPVIKRLYPEKGPEREQAIKRHLEFFNTHPYMAAPILGVTTAMEEQKANGADIDDGA INGIKVGLMGPLAGVGDPIFWGTVRPVLAALGAGFATDGSIIGPILFFVLFNAIRLGF RYWGVFYGYTKGTDVVSDMSGGLLQKLTEGASILGLFVMGALVNKWTTIYVPLVAYTT EDSKTGKDVPTTVQSILDQLMPGLLALLLTFACMWILKKKVNALWLILGLFVVGILGY WSGILGLPPAGYSPLG" misc_feature complement(804920..805765) /locus_tag="lmo0781" /note="PTS mannose transporter subunit IID; Region: PRK11103" /db_xref="CDD:182965" regulatory complement(805775..805780) /regulatory_class="ribosome_binding_site" gene complement(805784..806596) /locus_tag="lmo0782" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985459" CDS complement(805784..806596) /locus_tag="lmo0782" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannose transporter subunit IIC" /protein_id="NP_464309.1" /db_xref="GeneID:985459" /translation="MSAIQLILVFLVSCISGMGSILDEWQTHRPLIACTLIGLVLGDI TTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVITGGQDISVGISLAIPLAA LGQVLTILVRTITVAFQHMADKAGKEGNLRSLDWIHVTALLLQAMRIAIPAVIVAVTV GTSAVENLLNAIPDVIVNGLNVAGGFIVVVGYAMVINMMSAKYLMPFFFLGFVVAAFT QFNLVALGVLGLVAAIIYIQLNPKYQLKEAIQQYGGGGGGRSADDLDDDLDD" misc_feature complement(805865..806596) /locus_tag="lmo0782" /note="mannose/fructose/sorbose family PTS transporter subunit IIC; Region: PRK15065" /db_xref="CDD:237895" regulatory complement(806604..806609) /regulatory_class="ribosome_binding_site" gene complement(806770..807255) /locus_tag="lmo0783" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985458" CDS complement(806770..807255) /locus_tag="lmo0783" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannose transporter subunit IIB" /protein_id="NP_464310.1" /db_xref="GeneID:985458" /translation="MEIRLARIDDRLIHGQVATVWTKETQVERIIVISDDVAKDEVRK TLLTQVAPPGVKASVVDVQKGIRVYNNPKYATTPVMLLFTNPTDVLTLVEAGVNITTV NIGGMAFREGKHMITNAVSVDETDEAAFRKLDEKGIELEIRKVASDNKVKLIPLLDKD K" misc_feature complement(806779..>807255) /locus_tag="lmo0783" /note="PTS system mannose-specific transporter subunits IIAB; Provisional; Region: PRK15088" /db_xref="CDD:185045" gene complement(807255..807689) /locus_tag="lmo0784" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985456" CDS complement(807255..807689) /locus_tag="lmo0784" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannose transporter subunit IIB" /protein_id="NP_464311.1" /db_xref="GeneID:985456" /translation="MPVGIIIGTHGEAARELLKSTEMIIGKQDNVEFITFVPGENTDT LITKYKEKLDKLDTSEGVIFMVDLFGGSPYNASSQIALPEDNMDVVTGVNIPMLLETL SMRAASNQKDLVETALTAGSGGVKSLKQSLPKIETEVGEDDL" misc_feature complement(<807303..807689) /locus_tag="lmo0784" /note="PTS system mannose-specific transporter subunits IIAB; Provisional; Region: PRK15088" /db_xref="CDD:185045" regulatory complement(807263..807268) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0784" regulatory complement(807698..807703) /regulatory_class="ribosome_binding_site" gene complement(807976..810792) /locus_tag="lmo0785" /db_xref="GeneID:985452" CDS complement(807976..810792) /locus_tag="lmo0785" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464312.1" /db_xref="GeneID:985452" /translation="MKRIDRIYEFILENPSTKTIREQLEQNEGFTASTISETLSILRN NVSMELNELHRQGKIIKIVGRPVLYFPKKAVEDEIGRTLSDNELEFDSCEPLLKMLKP SIVERSPFDDLIGVNDSLKTPVEQAKAAVLYPPNGLHTMILGQTGVGKTLFANLMYRF SQHAKRLPADAPFIIFNCADYYNNPQLLMSHIFGHVKGAFTGAENDKGGLVEKAEGGI LFLDEIHRLPPEGQEMIFYLMDSGTYNKLGETDRTRKSNVLIIGATTENPESSLLKTF MRRIPIIITLPSLEERTAFERVELLKYLLSSEAHRVNKPIRIEDEAAKALIGNTTYGN IGQLKSNIQLVCAQGFLNSFDKDEEILIDFKTLPINIKDGFFHFSNRRKELQAIAEYL EPYTTIFPELNNTLITSDEYEPNFNLYKIIEDKASILMDQGVEDDDIKKFIKMDIDIH LNSFYNKFKNTIHNRENILKIVNEEILNFAEGVELRIEHQLGKKLNERFLLAFSLHLT SFIKRIESNKPLKYTNIENVVNDQPEAYELSREIKDDIEATFHIRVPNMEVMYLTLLI SSLLKEQENARVAVLVATHGNNTASSMVSVAKKLLGEGLVEGIDMPLDQSPKIVLDKL TERAKEMDMGRGLLLLVDMGSLTSFAPVISERTGIPVRSIDMVSTATVIEAVRKSNIL DMELDSIYDSLKDFRGYGGYNSDDDTLDSNQKPHAIITICATGEGTAEKLQLFIENIL DTITTDAIKVIPIGLHEMDTKLEQLQEENDILMAVGIQDPKIQIPFIPLERLFGIDGE EQLVSLVKQRNIIVKKGETGRIAKEIIEESLNEFLTYLNPKKTIEILSSFASVLEKKL GYKLDNTFKINLLIHVGCALERMVLNDGLIYREPKDMLETNIFKALEQTNKEVIYKMN LKLTNDELCYLYDILNEIQPEVLS" misc_feature complement(808282..810792) /locus_tag="lmo0785" /note="Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription, Signal transduction mechanisms]; Region: PspF; COG1221" /db_xref="CDD:440834" misc_feature complement(808006..808254) /locus_tag="lmo0785" /note="PRD domain; Region: PRD; pfam00874" /db_xref="CDD:459973" regulatory complement(810800..810805) /regulatory_class="ribosome_binding_site" regulatory 810971..810976 /regulatory_class="ribosome_binding_site" gene 810985..811620 /locus_tag="lmo0786" /db_xref="GeneID:985450" CDS 810985..811620 /locus_tag="lmo0786" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ACP phosphodiesterase" /protein_id="NP_464313.1" /db_xref="GeneID:985450" /translation="MSKVLFIKASPLPNEVSRSSQVAETFMAEYKAKNPSDTVEELVL YNTEVPLLDLELMTAGRELQAGKAFTDLAPDVQKKLNAYNALTEQFLAADKYVFVFPL WNLGIPPLLKAYIDTFVIAGKSFRYTEHGPEALLKDKKAILIHGSGGIYSAGPTSSFT HGEPYLRTILQFIGINVVPSIFVEGIDHNPSKEAEIVAAAKAVAQESATEF" misc_feature 810985..811617 /locus_tag="lmo0786" /note="FMN-dependent NADH-azoreductase [Energy production and conversion]; Region: AzoR; COG1182" /db_xref="CDD:440795" regulatory 811656..811686 /regulatory_class="terminator" regulatory 811800..811805 /regulatory_class="ribosome_binding_site" gene 811813..813189 /locus_tag="lmo0787" /db_xref="GeneID:985449" CDS 811813..813189 /locus_tag="lmo0787" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid transporter" /protein_id="NP_464314.1" /db_xref="GeneID:985449" /translation="MEEQKEELQRGLKNRHIQLIAIGGAIGTGLFLGAGKSIHLAGPS IMLVYLIIGAILFFVMRALGELLIHNPTTGSFTEFAEQFIGPWAGFITGWTYWFCWIV TGIAEITAVGMYVKFWVPDLPQWIPALACVLILLLFNLATVKAFGEIEFWFAIIKVVV IIALIVIGFVLVFIGYKHGTSTASFSNLVDYGGFFPNGIAGFLLAFQMATFSFVGIEL VGVTAGEADDPERTLPKAINNIPIRILIFYIGALLVLMSIYPWSNIDPNTSPFVSVFT MIGIPAAAGIINFVVLTAAMSSCNSGIFSTSRMLYTLSAEGKAPKKMHHLSSNGVPAT ALITSTACLLIGVFLNYFLPEQVFILVTSIATICFIWVWGVILVAHLRFRHKHPEISE KSKFKMPLSPLMNWVSLIFFGGLLVILGFAADTRIALFVTPVWFLILGIAYQILKASN RKTKIRHN" misc_feature 811816..813165 /locus_tag="lmo0787" /note="L-asparagine transporter or related permease [Amino acid transport and metabolism]; Region: AnsP; COG1113" /db_xref="CDD:440730" regulatory 813197..813248 /regulatory_class="terminator" regulatory 813440..813445 /regulatory_class="ribosome_binding_site" gene 813451..817878 /locus_tag="lmo0788" /db_xref="GeneID:985448" CDS 813451..817878 /locus_tag="lmo0788" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0788" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464315.1" /db_xref="GeneID:985448" /translation="MIHAGLDVGSTTAKAVALNDQGDILFQTYRRHYSDIKKVTLEIM QDMQKKCGMTEMTFKITGSSGLAISKFLNVPFVQEVIACTEAVEQVIPETDVVIELGG EDAKIIYFSGGIEQRMNNACAGGTGAFIDQIATLLQTDPTGLNELAQNANTIYPIASR CGVFAKTDVQPLLNEGARKEDIAASIFQSVVTQTISGLACGRPIRGKVAFLGGPLTFL DQLRYRFTETLKMRDSDIIAPQNAEYFIALGTAFTGLNDIPLKVDDMIHRLSNMDMTT MATDTVILPALFEKQEDLEDFRARHNQMKAKRAKLEDYEGDAYLGIDAGSTTTKLILM SQTNEILYSFYSSNNGNPLQSVIDATSDLYEILPEKVRVAQSGITGYGESLIKAALKI DVGEIETVAHYRAAREFLPDVDFILDIGGQDMKCMKIKKGALDSLMLNEACSAGCGSF LETFAQTLNLSIEEFAARALEAKAPVDLGSRCTVFMNSKVKQVQKEGVSMEDLSAGLA YSVVKNALQKVIKLRSPKDIGEKVIVQGGTFYNESVLRAFELLTGREVVRPDIAGMMG AYGAALIAREHYETGEVTEMLVLEKLREFSAETSQSRCNLCSNTCQLTVTRFGDDRMF VSGNRCERGERVETKRNLLPNLYAYKLKRTFDYKSLKKSEATRGTIGIPRALNVFENY PLWHTILTNLGFRVVLSSKSSKNLYDKGIETIASEAVCFPAKLTHGHIMDLIKKKADR IFYPSVVYEKPEFGEATNNFNCPVVAGYPEVIRVNVDALEEKNIPMISPFLTLDNEKA LIEQMSLAFPEVPAADMEKAVQAGLEEAELCRKDIQAEGEAALTYIKKNKIKGIVLAG HPYHIDPEVNHGIPELITMNGMAVLTEDSISHLGEIDHKLRVENQWKYHARLYRAASF TAKSEDLEFVQLTSFGCGLDAITTDMCQEIIEGHNKVYTLLKIDEINNLGAARIRVRS LKAAMEEREKNNVKPGIMAKPKERPLFTKEMKKTYTILAPQLAPTHFEMLEAACRVGG YNLEVLPAVTPRAVDEGLRYVNNDACYPAILTIGQMMDALKNGDYDVNNLAVLMTQTG GGCRATNYISMLKKALGEAGLDHIPVISLNANGLEKQPGFKMTPKVLVRFLAGISLGD ALDRMLYRTRPYEVEPGSANKMFRHYLDAGRALMENYSFGAYKKLANEMVRAFDNLPI TNEVKPRVGVVGEILVKFHPGANNNIVDVIEDEGGEAVVPDLTDFILYCCYDDHFAAN TFGRSKVKSFAKQSVAIPLINQFRKPVTDALKKSERFEAPASIESIAEKASQLLSLGN KMGEGWFLTGEMFELLDSNVPNIACLQPFACLPNHITGRGMIKGLKKMYPEANIMSID YDAGSSSVNQLNRIKLMLSIARKQLETTEVVTEKETNTRFNPREKILGKAKQVRESAP VEMIGNKVKQARDADPVGAIAQKVKHVATSSEHVQTDND" misc_feature 813457..814218 /locus_tag="lmo0788" /note="nucleotide-binding domain (NBD) of the first repeat of Aquifex aeolicus hypothetical protein O66634 and similar proteins; Region: ASKHA_NBD_O66634-like_rpt1; cd24034" /db_xref="CDD:466884" misc_feature 814393..815196 /locus_tag="lmo0788" /note="Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid transport and metabolism]; Region: YjiL; COG1924" /db_xref="CDD:441527" misc_feature 815260..>815352 /locus_tag="lmo0788" /note="Uncharacterized conserved protein with two CxxC motifs [Function unknown]; Region: COG3862" /db_xref="CDD:443071" misc_feature 815413..816411 /locus_tag="lmo0788" /note="Predicted nucleotide-binding protein, sugar kinase/HSP70/actin superfamily [General function prediction only]; Region: COG3580" /db_xref="CDD:442799" misc_feature 816460..817674 /locus_tag="lmo0788" /note="Predicted nucleotide-binding protein, sugar kinase/HSP70/actin superfamily [General function prediction only]; Region: COG3581" /db_xref="CDD:442800" regulatory complement(817875..817907) /regulatory_class="terminator" regulatory 817886..817918 /regulatory_class="terminator" gene complement(817914..818762) /locus_tag="lmo0789" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985444" CDS complement(817914..818762) /locus_tag="lmo0789" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464316.1" /db_xref="GeneID:985444" /translation="MDISVYVASAFSKNNIGGNKAGVVLNEPTLTNTQKMAIAKQLGF AETAFLTESNCADYKLEYFTPKEEIDLCGHATIGTFAILMHLNKIHKSQYTIETNSGV LTITIKDGTIFMEQNQPTFYETIPANNLTGCFDLNLLNTHYPIQIVSTGLKDILVPLK SEADLYTLEPNFEEVKKVSKHYEVVGMHLYTFSDDRIICRNFAPLFDINEEAATGTSN GALACYLYQNQYLQKELYVFEQGHSLHSPSEILVKLDVNVHSEIARVYVGGNGYYCET KYLSIE" misc_feature complement(817953..818762) /locus_tag="lmo0789" /note="Predicted epimerase YddE/YHI9, PhzF superfamily [General function prediction only]; Region: YHI9; COG0384" /db_xref="CDD:440153" regulatory complement(818772..818777) /regulatory_class="ribosome_binding_site" gene complement(818789..819265) /locus_tag="lmo0790" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985443" CDS complement(818789..819265) /locus_tag="lmo0790" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464317.1" /db_xref="GeneID:985443" /translation="MNKKTNACRILDKQKVNYELREYAWSEDSLDALHVAEETGNNPA QIFKTLVLTGDKTGNIVACIPADKTLHLKHLAKISGNKKCELIAVDSLEKLTGYIRGG CSPIGMKKLFPTFIDNSAESLDTMLISAGKRGLQIELAPADLKKVVRAEFAMITEE" misc_feature complement(818801..819256) /locus_tag="lmo0790" /note="This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins. These trans-acting, single-domain proteins are homologs of ProX and also the cis-acting prolyl-tRNA synthetase (ProRS)...; Region: YbaK_deacylase; cd00002" /db_xref="CDD:237976" misc_feature complement(order(818879..818881,818960..818965, 819122..819124)) /locus_tag="lmo0790" /note="putative deacylase active site [active]" /db_xref="CDD:237976" regulatory complement(819274..819279) /regulatory_class="ribosome_binding_site" regulatory 819376..819381 /regulatory_class="ribosome_binding_site" gene 819389..820039 /locus_tag="lmo0791" /db_xref="GeneID:985441" CDS 819389..820039 /locus_tag="lmo0791" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0791" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464318.1" /db_xref="GeneID:985441" /translation="MKKGLFSMVLVLAMVLVLSACGASRVEPKKAGEITVNAVVYNKD TDKVKDVYGEDGSKFEKEFETSFKESFISTFTASFSSDVNLDKQVDEFYDALRKQVNE KTSYTTKVTNDDKESPEIQFAIKGLDMKGVQTELVEELTKAATADPSIASDDQKMAEK TMEIYTKAVQNADAVSEAKTVTLKLKADPDDDSLWKMENDMAFMQELTTAFFMGGM" misc_feature 819443..820024 /locus_tag="lmo0791" /note="Domain of unknown function (DUF5105); Region: DUF5105; pfam17118" /db_xref="CDD:407256" regulatory 820057..820093 /regulatory_class="terminator" regulatory 820133..820138 /regulatory_class="ribosome_binding_site" gene 820145..821035 /locus_tag="lmo0792" /db_xref="GeneID:985439" CDS 820145..821035 /locus_tag="lmo0792" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464319.1" /db_xref="GeneID:985439" /translation="MTTIKIALIQQKAVPNNKEANLKLAIQYIKEAHEKGADLVLFPE MWSNGYAPPFEDAFNHPLATGFGAERFKWLDEAIAADSAYVSTLKKLAKELQIGICAT YLSKTEQNSQNTAIIIDRKGEIILDYAKVHTCDFSLEILLQSGEEFKVCEFDGIKLGV MICYDREFPESARILMLKGAEIILVPNACDMNPARLNQLNSRAFENMVGVAMANYPGE KWGRSTAFSPIIFDENGDYRDNTIIETDDFSEGIFIAEFNLDEIRTYRENETWGNAYR KPHTYTDLISLDVKAPFKRN" misc_feature 820160..820972 /locus_tag="lmo0792" /note="Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes; Region: nitrilase; cd07197" /db_xref="CDD:143587" misc_feature order(820274..820276,820532..820534,820544..820546, 820556..820558,820631..820636,820640..820645, 820706..820708) /locus_tag="lmo0792" /note="active site" /db_xref="CDD:143587" misc_feature order(820274..820276,820532..820534,820631..820633) /locus_tag="lmo0792" /note="catalytic triad [active]" /db_xref="CDD:143587" misc_feature order(820535..820546,820553..820555,820574..820582, 820634..820636,820640..820654,820661..820666, 820733..820738,820742..820750,820754..820759, 820805..820810,820961..820972) /locus_tag="lmo0792" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143587" regulatory complement(821030..821060) /regulatory_class="terminator" regulatory 821041..821071 /regulatory_class="terminator" gene complement(821070..821771) /locus_tag="lmo0793" /db_xref="GeneID:985432" CDS complement(821070..821771) /locus_tag="lmo0793" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464320.1" /db_xref="GeneID:985432" /translation="MVLLGALVNGLGILIGSVIGMKLHNIPERMKDTVMKGMGLSVIV LGIQMAFKTSNSLIVILSICFGAVIGEWLNIDYHLNQLGHWIERKVGAKGKSNVSKGF VTATLIFVIGAMGIIGALDSGIRGNHDVLYTKSVMDGFIALLLSTTLGWGVMLSAIPV FLFEGIIALFATQINQFVPADLMALIIKELTATGGIMILAIGLNLLGLTKIRVANLVP GILVVALIVTGLYYF" misc_feature complement(821073..821768) /locus_tag="lmo0793" /note="Uncharacterized membrane protein YqgA, affects biofilm formation [Function unknown]; Region: YqgA; COG1811" /db_xref="CDD:441416" regulatory complement(821778..821783) /regulatory_class="ribosome_binding_site" regulatory complement(821841..821878) /regulatory_class="terminator" gene complement(821886..822527) /locus_tag="lmo0794" /db_xref="GeneID:985430" CDS complement(821886..822527) /locus_tag="lmo0794" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464321.1" /db_xref="GeneID:985430" /translation="MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDI NILQKDIFDLTLSDLSDQNVVVDAYGVSPDEAEKHVTSLDHLISVLNGTVSPRLLVVG GAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLRSHQAEFSWTYISPSAMFE PGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNERFTVAGK" misc_feature complement(821895..822524) /locus_tag="lmo0794" /note="Putative NADH-flavin reductase [General function prediction only]; Region: YwnB; COG2910" /db_xref="CDD:442154" regulatory complement(822536..822541) /regulatory_class="ribosome_binding_site" gene complement(822611..823531) /locus_tag="lmo0795" /db_xref="GeneID:985429" CDS complement(822611..823531) /locus_tag="lmo0795" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464322.1" /db_xref="GeneID:985429" /translation="MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYR IIWSFIFMLFLIVCLRKASMVFQETKDVLLKPKTLIAIIAAAFLVTANWYLFIYTVNS GHVTEASLGYYINPLVNVLLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAA IGMAVTFSLYGLIKKVVSVSVWTGLTLETMIITPFALIYVIFFATNGLMQYAAQTNII LVGAGVVTAIPLLLFATAAKKISYTMVGFLQYIGPTLMLALGVLLFKESFDHMQLFAF MFIWLALIIFTISHIYSAAKIKQLANAAKK" misc_feature complement(822629..823501) /locus_tag="lmo0795" /note="Membrane protein RarD, contains two EamA domains, drug/metabolite transporter family [General function prediction only]; Region: RarD; COG2962" /db_xref="CDD:442202" regulatory complement(823543..823548) /regulatory_class="ribosome_binding_site" regulatory complement(823593..823628) /regulatory_class="terminator" gene complement(823638..824168) /locus_tag="lmo0796" /db_xref="GeneID:985428" CDS complement(823638..824168) /locus_tag="lmo0796" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464323.1" /db_xref="GeneID:985428" /translation="MTVEKWNVDPAHSSIEFQVKHMMVSKVKGAFSDFTADIEMDPED LTSAKLNFSVAAASVDTRQAQRDGHLKSEDFFNVEKYPNVTFTATKITADGDDEYEVT GDLTIRDVTKPLTLEVSYEGTGKDPNTGNMVAGFEAKGKFNRKDFGLNYNAALETGGV LIGDEVKLNIQIEASK" misc_feature complement(823641..824168) /locus_tag="lmo0796" /note="Polyisoprenoid-binding periplasmic protein YceI [General function prediction only]; Region: YceI; COG2353" /db_xref="CDD:441920" regulatory complement(824178..824183) /regulatory_class="ribosome_binding_site" regulatory 824410..824415 /regulatory_class="ribosome_binding_site" gene 824423..824884 /locus_tag="lmo0797" /db_xref="GeneID:985426" CDS 824423..824884 /locus_tag="lmo0797" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0797" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464324.1" /db_xref="GeneID:985426" /translation="MVGINTDTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLA MINVIYSTPGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKL SKKGEDLSKRSTANAFMYKAMMKVFENLTENEIEELIRLNKKVETLLKKSK" misc_feature 824435..824857 /locus_tag="lmo0797" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" regulatory complement(824877..824930) /regulatory_class="terminator" regulatory 824888..824941 /regulatory_class="terminator" gene complement(824936..826396) /locus_tag="lmo0798" /db_xref="GeneID:985421" CDS complement(824936..826396) /locus_tag="lmo0798" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="lysine-specific permease" /protein_id="NP_464325.1" /db_xref="GeneID:985421" /translation="MKKETHGEIRRDLKTRHLSMIAIGGSIGTGLFLASGNAIHTAGP GGALVAYVAIGIMVYFLMTSLGEMATYMPVSGSFSTYASRFVDPAFGFALGWNYWFNW AITLAVDISTAAIIVQFWLPNTPAWLWSAIFLILIFGLNALSVKAYGESEYWFSIIKV ATVIIFLIVGVLTIVGILGGEVIGFSNFTAGDAPFKGGFFAILGTFLIAGFSFQGTEM VGIAAGESATPETSVPKAIKQVFWRILLFYIFAIFIIGMIIPYTNPNLLSAEATDVAI SPFTLVFEKAGLAFAASVMNAVILTSVLSAGNSGLYASTRMLWAMARDKKAPKFLGKV NRRGIPMAALIVTTIVGAMTFITTLTENGTVIYTWLLSASGLTGFIAWVGIAISHYRF RKAFIKQGHDLSELKYKAKFFPFGPILALVLCILVIVGQDYAAFLKPEFTNPAWWQKI GISYIGLPIFLVFWLSFKFTNKTKVIPLEDCKFDQK" misc_feature complement(824942..826387) /locus_tag="lmo0798" /note="Amino acid permease [Amino acid transport and metabolism]; Region: LysP; COG0833" /db_xref="CDD:440595" regulatory complement(826404..826409) /regulatory_class="ribosome_binding_site" gene 826486..826683 /locus_tag="lmos30" /db_xref="GeneID:18245135" misc_RNA 826486..826683 /locus_tag="lmos30" /product="Lysine" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245135" gene complement(826752..827513) /locus_tag="lmo0799" /db_xref="GeneID:985420" CDS complement(826752..827513) /locus_tag="lmo0799" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0799" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464326.1" /db_xref="GeneID:985420" /translation="MTAYPQFDVILKALNLSSVGVIITDPEQKDNPIIFVNTGFENIT GYAKEEALGSNCHFLQGDDTDKEEVAKIRHAINEKSTANVLLKNYRKDGTSFMNELTI EPIYDDHEHLYFVGIQKDVTTEHDYQLELEKSLTEIEKLSTPIVPIKENICVLPLIGS LTHDRFQHMSEYVSEYMDHGKEDYLIMDLSGLAEFNEDAVMNLVKFHGFMKLTGVELI ITGISPKFAMTLIRYEENLASLTTYSTIKEALQFY" misc_feature complement(<827091..>827510) /locus_tag="lmo0799" /note="bacterio-opsin activator; Provisional; Region: PRK13558" /db_xref="CDD:237426" misc_feature complement(826764..827090) /locus_tag="lmo0799" /note="Sulphate Transporter and Anti-Sigma factor antagonist domain of the 'stressosome' complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation; Region: STAS_RsbR_RsbS_like; cd07041" /db_xref="CDD:132912" regulatory complement(827523..827528) /regulatory_class="ribosome_binding_site" regulatory 827651..827656 /regulatory_class="ribosome_binding_site" gene 827666..828016 /locus_tag="lmo0800" /db_xref="GeneID:985418" CDS 827666..828016 /locus_tag="lmo0800" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464327.1" /db_xref="GeneID:985418" /translation="MYITFTDSAKNRLAALRSNLEGRLHLYYDTEGCSCENSGIFTLR LVEEKTAEDDEIQSNIGPVLIKRWTEMFLEEALTIDYNETEKTMILKSDGQYYNRNLL LVTDKDEVISCPIS" misc_feature 827666..827995 /locus_tag="lmo0800" /note="Predicted Fe-S cluster biosynthesis protein YqkB [General function prediction only]; Region: YqkB; COG4918" /db_xref="CDD:443946" regulatory 828031..828064 /regulatory_class="terminator" regulatory 828155..828160 /regulatory_class="ribosome_binding_site" gene 828168..830108 /locus_tag="lmo0801" /db_xref="GeneID:985415" CDS 828168..830108 /locus_tag="lmo0801" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_464328.1" /db_xref="GeneID:985415" /translation="MKKLCTVILFLTLLLNGFVPNAHAKTESPSADNNLQVAPPAAIK DLFPDPAMANEVLKSLNLKKLNKKSTSDTVTQTELNSLTGSFQAINKGIKSIEGVEYL QNITELDVEKNQITDIAPVANLKKLTTLLINTNQITDISPVADLANLTTFYCGNNPIS DISAVQNLTKLSIFNCYTANVEDISPVKNLVNLKTLSLGSNNIHDISDIEKLTALEYL SFSNNPVENPEVIGNLTNLNTLWLYNAQIRNIDFTANLPKLKSVYLYNNQISNISEVS NWANIEYLELNNNQITDITPVANLTTLKTLKLNDQIITNREIPFQKNISIENKVMDNF GNIVTPNNISDNGTYNSPTLSWNLNETKDNLSYDFTTKITILNINATYSGTVIQPLTK DSTRPIITADGKVSYPEGTTKTTTEFLTDIHATTDDGSPIEVDLNALDFGTAGSYTVT LTAVDTAGNEATPVDVTIIITSVDTSKPVITADEKVSYPEGTTKTAAEFLTDIHATTD DGSPIEVDLNAVDFGTAGSYTVTLNAVDTAGNEATPIQVTIIITNSKKIDPIIPVEPG GNDVKPEKPNEIIILPKDSEIPLSIIPKDNIEKTNSINVIKMIETNEIKNKMLPKTGD KLPLTVFLGMLITLAGISYLRK" misc_feature 828168..828338 /locus_tag="lmo0801" /note="Bacterial adhesion/invasion protein N terminal; Region: Internalin_N; pfam12354" /db_xref="CDD:289150" misc_feature 828261..829487 /locus_tag="lmo0801" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 828480..828545 /locus_tag="lmo0801" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 828546..828611 /locus_tag="lmo0801" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 828612..828668 /locus_tag="lmo0801" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 828669..828743 /locus_tag="lmo0801" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 828744..828809 /locus_tag="lmo0801" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 828810..828875 /locus_tag="lmo0801" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 828876..828941 /locus_tag="lmo0801" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 828942..829007 /locus_tag="lmo0801" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature <829488..829571 /locus_tag="lmo0801" /note="Domain of unknown function (DUF4959); Region: DUF4959; pfam16323" /db_xref="CDD:465093" misc_feature 829599..829820 /locus_tag="lmo0801" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" regulatory 830119..830155 /regulatory_class="terminator" regulatory 830247..830252 /regulatory_class="ribosome_binding_site" gene 830259..830897 /locus_tag="lmo0802" /db_xref="GeneID:985413" CDS 830259..830897 /locus_tag="lmo0802" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464329.1" /db_xref="GeneID:985413" /translation="MEQPSVDELKNWRNVMLLHRFALEEVNTKLKILNEEFQFIHDYN PMEHLKSRVKSLESIGAKLEKKKVDITPENALKYVHDIAGIRITCSFVSDIFRIHEML AGQSDITIKRVKDYVTNPKPNGYRSLHLLCEVPVFLTNRSEIMTVEIQIRTVAMDFWA SLEHKIYYKYQQEAPVELVNELQDAARIITHLDEKMKNLNDQIDKYKKEKEN" misc_feature 830277..>830891 /locus_tag="lmo0802" /note="ppGpp synthetase catalytic domain (RelA/SpoT-type nucleotidyltranferase) [Nucleotide transport and metabolism, Signal transduction mechanisms]; Region: YjbM; COG2357" /db_xref="CDD:441924" regulatory 831010..831015 /regulatory_class="ribosome_binding_site" gene 831025..833073 /locus_tag="lmo0803" /db_xref="GeneID:985412" CDS 831025..833073 /locus_tag="lmo0803" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Na+/H+ antiporter" /protein_id="NP_464330.1" /db_xref="GeneID:985412" /translation="MEIFLYVLALLVAIFISNLLNRFVPFVSVPLIQIGLGVLIAIMP ITFNLQLNPELFLVMFIAPLLFNDGRQTDKAALWGMRMPILVLALGLVFATVVVIGYF VHWMIPTIPLAAAFALAAALAPTDAVAVSSLSGRINLPKRIMNLLEGEALINDASGLV AFQFAIAAMVTGVFSLMDASISFFVIAIGGILVGLILSWLKFRLLKWVRGLGMEDVTF HMLIQILTPFIIYLAAEEIHVSGILAVVAAGIMHSMEQKKMDPQLVKLNVVSQSTWSV IIFVLNGLVFLLLGTQLPAITEVVWNDSGSSNLQVMAYILSITAALILLRFIWVYISW SIGAKQRQKQNKKTQLPKFRPVVLTSLSGVRGAVTLASALAIPFFLDDGSLFPQRSLI IFIASGVILCTLVIATFILPLLAKSEEVTTEDERAEIATRIRILRNVIRELKEQTLPE TKAATDEVIEDYRKRIYDLQQNNSSNRGMDERERAKRLEIIQWERENTQKMTDEGRIV ATDSYRYQHYLNMMEQAIKQRFRTKVKTAWMFLYRLIMLVIHPKKWGRITHKVKKGIS KDSERFQAIRQLREDNEILIISKLKEQLTKENVDIIGPLITEHTIFLERVRKEHSPRG KRAKFEQKKREVQVVAFQLERDIIQNMFEKGGISRELARDLRQNLNMIETYLYDDFLE " misc_feature 831025..832572 /locus_tag="lmo0803" /note="NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism]; Region: NhaP; COG0025" /db_xref="CDD:439796" regulatory complement(833069..833109) /regulatory_class="terminator" regulatory 833080..833120 /regulatory_class="terminator" gene complement(833117..833587) /locus_tag="lmo0804" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985406" CDS complement(833117..833587) /locus_tag="lmo0804" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0804" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464331.1" /db_xref="GeneID:985406" /translation="MKNYPFFKYNMNIKTFFTFIVALAILGLGLYLFITYEVLRVWQF WLLYAVFVISTINIFSTYVNGTVSINNHALFYKRGFSDKKYPFSQYMLECDTLLHGRT ISFLPYYTINILNLETGKEEKIKLRNAAIVHKNGRKNFHLEIESLAEQLKKIQA" regulatory complement(833597..833602) /regulatory_class="ribosome_binding_site" gene complement(833615..834076) /locus_tag="lmo0805" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985405" CDS complement(833615..834076) /locus_tag="lmo0805" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0805" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464332.1" /db_xref="GeneID:985405" /translation="MKKYRFLKFNINAGSVTLLVMFSSFFILSVILSTLLSMTWEFYA ILSALVIVCFFNFKKFFPGEVAVSEEAFYYKSKAYPYSKYIIECDAKLIRFKSPSARA IPYYRIVIINKDTRAEKLIKVHNAARRYKGANTQMQVEMEELRDQLKQYQS" regulatory complement(834087..834092) /regulatory_class="ribosome_binding_site" regulatory 834274..834278 /regulatory_class="ribosome_binding_site" gene 834287..834829 /locus_tag="lmo0806" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985404" CDS 834287..834829 /locus_tag="lmo0806" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464333.1" /db_xref="GeneID:985404" /translation="MEIGKRIKNLRLSKNLTQEELGERTDLTKGYISQLERDLSSPSI ETLFAILEVLGSTPKDFFDEEEHNQKVIYGELEHTFFEDEEKGYRIKWLVPESNEKEM EPVLLEIEANSCFKSFEPSLSETFAYVLKGEVTVLLGRNEYVAKKGEAIYFHAADEHQ IINRSSEHATLILVATESYL" misc_feature 834287..834484 /locus_tag="lmo0806" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" misc_feature 834545..834814 /locus_tag="lmo0806" /note="XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain; Region: cupin_XRE_C; cd02209" /db_xref="CDD:380339" misc_feature order(834554..834556,834599..834601,834605..834607, 834638..834640,834647..834649,834659..834661, 834761..834763,834767..834769,834803..834805) /locus_tag="lmo0806" /note="putative active site [active]" /db_xref="CDD:380339" regulatory 834830..834835 /regulatory_class="ribosome_binding_site" gene 834845..835939 /locus_tag="lmo0807" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985403" CDS 834845..835939 /locus_tag="lmo0807" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter ATP-binding protein" /protein_id="NP_464334.1" /db_xref="GeneID:985403" /translation="MTETIIRFENVTKQFDNDPPVLDNVSFEIEKGKFYTLLGPSGCG KTTILRLIAGFLEASKGQIYLGDKVINQIPANKRPVNTVFQDYALFPHLNVYENVAFG LRIKKLKKEAIDEKVKEALRFVNLKGYEKREISEMSGGQRQRVAIARAIVNEPEVILL DEPLSALDLKLRTEMQYELRDLQKRLGITFIFVTHDQEEALAMSDEIFVLNKGEIQQS GTPIDIYDEPINKFVADFIGESNIVNGKMIQDFEVEFVERRFECVDQGFRPNEVVEVV IRPEDLEITSAEKGQLQVTVDWMLFRGVHYEVGCIDIDGNEWLVHTTRKVRVGDKIGL AFEPEAIHVMRLGETEEEFDKRLDSYDEVQ" misc_feature 834845..835879 /locus_tag="lmo0807" /note="ABC-type Fe3+/spermidine/putrescine transport systems, ATPase component [Amino acid transport and metabolism]; Region: PotA; COG3842" /db_xref="CDD:443052" regulatory 835926..835931 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0807" gene 835939..836748 /locus_tag="lmo0808" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985401" CDS 835939..836748 /locus_tag="lmo0808" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter permease" /protein_id="NP_464335.1" /db_xref="GeneID:985401" /translation="MNRRTRTVYLVPYVLWILLFVVAPILLIVYYSFFDVDGNFTVDN YIHFFTPVYLKMTASSFWYAFLITVFTLLISYPTAYLLTKLKHKQLWLLLIILPTWIN LLLKAYAFIGIFGTYGAANQFLEILGIGSKQILFTDFSFLFVSTYIFIPFMILPIFNA IEEINPTLIQASRDLGASSLTTFRRVIFPLTADGVKSGCQAVFIPALSLFMITRLIAG NRVITLGTAIEEHFLVTQDWGMGSTIGVFLIIAMILIMFLTGSKKKRGARK" misc_feature 835945..836745 /locus_tag="lmo0808" /note="ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]; Region: PotB; COG1176" /db_xref="CDD:440789" regulatory 836730..836735 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0808" gene 836745..837551 /locus_tag="lmo0809" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985399" CDS 836745..837551 /locus_tag="lmo0809" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter permease" /protein_id="NP_464336.1" /db_xref="GeneID:985399" /translation="MKKSKWGTIYLVLVFVILYAPIFYLIFYSFNKGGTMHNFSGFTL GYYKEVFQDTRLLIIVLNTFVIALLSSVIATIIGVCGALAIKFMPKPFAKNSLLSLNN VLIVSPDVIIGASFLIFFTILGVKLGFISVLVSHIAFSIPIVVLMILPKLQEMSPTLM DAARDLGASQWQVLSKVILPYIMPGVLAGFFMALTYSLDDFAVTFFVTGNGFSTLAVE IYSRARQGISLSINALSTLIFLFTIILVIGYYFINQRNTSKNIRTGATKE" misc_feature 836745..837521 /locus_tag="lmo0809" /note="ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]; Region: PotC; COG1177" /db_xref="CDD:440790" regulatory 837533..837537 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0809" gene 837548..838621 /locus_tag="lmo0810" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985395" CDS 837548..838621 /locus_tag="lmo0810" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter substrate-binding protein" /protein_id="NP_464337.1" /db_xref="GeneID:985395" /translation="MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGD YIDPSLITKFEKETGIKVIYQTFDSNEAMMTKIEQGGTTFDIAVPSDYAISKMKEENL LIPLDHSKLPNEKYLDPRFMDLSFDDDNKYSMPYFWGTLGIIYNKEMFPDKNFDTWNA LFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVG DEIKLLMADNEAGVAVTFSGEAAEMLSENEDLEYVIPKDGSNLWFDNMVIPKTAKNVD GAHKFINFMLKPENAAINAEYVGYATPNAKAVELLPKEISSDERFYPDMDELNNLEVY DNLGKRMLSYYNELFLEFKMYRK" misc_feature 837653..838606 /locus_tag="lmo0810" /note="The periplasmic substrate-binding component of an uncharacterized active transport system closely related to spermidine and putrescine transporters; contains the type 2 periplasmic binding fold; Region: PBP2_PotD_PotF_like_2; cd13663" /db_xref="CDD:270381" misc_feature order(837671..837673,838253..838255,838262..838264, 838331..838333,838337..838339,838445..838447) /locus_tag="lmo0810" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270381" regulatory 838738..838743 /regulatory_class="ribosome_binding_site" gene 838751..839452 /locus_tag="lmo0811" /db_xref="GeneID:985394" CDS 838751..839452 /locus_tag="lmo0811" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carbonic anhydrase" /protein_id="NP_464338.1" /db_xref="GeneID:985394" /translation="MTKEKVLWGYDEKTGPEMWGHICSDFEIAHTGKAQSPVDIEQAD VVKLKPSTMKFYYKETDYTIRRIEQSVHVFPHDKEQGLRFNGEYYPLVSFHAHIPAEH LLDGYIYPIEWHFVHEKPDGTTLVMSAWMDIDNTNNIEFKNLPTYFPEVFADFETERE ITLDVNEFMPEERVFYTYQGSRTTPPTVEGVTWIVLKNAKTLGQEDFTEFEKAIGNTS RPVQDLNGREITFYN" misc_feature 838772..839446 /locus_tag="lmo0811" /note="Carbonic anhydrase [Inorganic ion transport and metabolism]; Region: Cah; COG3338" /db_xref="CDD:442567" regulatory 839505..839510 /regulatory_class="ribosome_binding_site" gene 839520..840062 /locus_tag="lmo0812" /db_xref="GeneID:985393" CDS 839520..840062 /locus_tag="lmo0812" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0812" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464339.1" /db_xref="GeneID:985393" /translation="MYEKARQMMIEAHSGQVRKITGEPYFSHPLNVARILRRAGFREE VVVAGLLHDAVEDTEMTDADIRATFGDEVADLVASHTENKTLSWEERKAHTIEQVRTG NLEEKALIVADKLDNLTSVKYALSSEGKSVWSYFKRGYDLQKWYNQGIKNNMEYGLNP SEIPPFFDEYARLVKWIFKK" misc_feature 839526..>839750 /locus_tag="lmo0812" /note="(p)ppGpp synthase/hydrolase, HD superfamily [Signal transduction mechanisms, Transcription]; Region: SpoT; COG0317" /db_xref="CDD:440086" regulatory 840185..840190 /regulatory_class="ribosome_binding_site" gene 840200..841072 /locus_tag="lmo0813" /db_xref="GeneID:985392" CDS 840200..841072 /locus_tag="lmo0813" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="fructokinase" /protein_id="NP_464340.1" /db_xref="GeneID:985392" /translation="MVYGAIEAGGTKFVVAIGEKSGKIIKRESYPTTEPAETMKAVIQ FFKQYEDELKAIGIGSFGPIDIRKSSATYGYITQTPKLAWRNYDIVGAMKKEFNVPIG FTTDVNAAALGEVSLGAAAGLDSCIYLTIGTGIGGGAVVSGKILEGFSHPEMGHIMVR RHKRDRFTGSCPSHSDCLEGLAAGGAIEKRWGQKAAELADNEEVWNLEAHYIAQALMN YTLILSPERIVLGGGVMKQRQLFPLVRQKLKALVNNYVQLPDLDEYIVPPKLEDDAGI TGCVLLAVDAEESN" misc_feature 840206..841045 /locus_tag="lmo0813" /note="nucleotide-binding domain (NBD) of Bacillus subtilis fructokinase (FRK) and similar proteins; Region: ASKHA_NBD_ROK_BsFRK-like; cd24067" /db_xref="CDD:466917" regulatory 841083..841114 /regulatory_class="terminator" regulatory 841145..841150 /regulatory_class="ribosome_binding_site" gene 841157..842086 /locus_tag="lmo0814" /db_xref="GeneID:985391" CDS 841157..842086 /locus_tag="lmo0814" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_464341.1" /db_xref="GeneID:985391" /translation="MSITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGGM TADMLREEIQKTKALTDKAFGVNLMLMMTNIAELTEVIIEEKVGIVTTGAGTPKTFMP IWKEAGIIVIPVVPSVMIAKRMEKMGADAVIAEGTEAGGHVGETTTMALLPQIVDAVT IPVIGAGGIADGRGIVAALALGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMV TGRKAGAPVRSIKNKMIKEYIRLEEENADRDTLEELTLGSLRKAVQEGDTDNGSVMAG QIAGLITEIKPCKDVIEEMMTDAKKVIAGLELK" misc_feature 841163..842074 /locus_tag="lmo0814" /note="putative enoyl-[acyl-carrier-protein] reductase II; Region: enACPred_II; TIGR03151" /db_xref="CDD:132195" regulatory 842085..842116 /regulatory_class="terminator" regulatory 842301..842306 /regulatory_class="ribosome_binding_site" gene 842313..842765 /locus_tag="lmo0815" /db_xref="GeneID:985389" CDS 842313..842765 /locus_tag="lmo0815" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464342.1" /db_xref="GeneID:985389" /translation="MKDILRDIGVIARALDSISNIEFKELNLAKGQFIYLVRICENQG IIQEKLVDILKIDRTTASRAIKNLEKNGLIIKKQNKNNKKNKLLFPTEKGQQLYPLII RENEYSNAVALKGFTEAEINMLTDALKKVKENIADDWLYVKKGNKRSY" misc_feature 842319..842714 /locus_tag="lmo0815" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" regulatory 842768..842773 /regulatory_class="ribosome_binding_site" gene 842781..843287 /locus_tag="lmo0816" /db_xref="GeneID:985388" CDS 842781..843287 /locus_tag="lmo0816" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="regulatory protein PaiA" /protein_id="NP_464343.1" /db_xref="GeneID:985388" /translation="MIKLCTISDSQALLEVSYKTFDETFRAQNKPENMDAYLKTNFTA KKLSDELKNPHSYFYFVFHQEAIAGYLKLNIGDAQTEEIAGNTIEIERIYVLKSFQKK GLGKELFNQAIEIAKEVDAKKIWLGVWEKNKNAIQFYAKLGFIKNGQHDFFMGDDCQT DIIMIKDL" misc_feature 842805..843212 /locus_tag="lmo0816" /note="NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, from bacterial antibiotic resistance to circadian rhythms in mammals. Members...; Region: N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate; cl17182" /db_xref="CDD:473072" misc_feature 843030..843284 /locus_tag="lmo0816" /note="Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]; Region: RimI; COG0456" /db_xref="CDD:440224" regulatory complement(843282..843315) /regulatory_class="terminator" regulatory 843293..843326 /regulatory_class="terminator" gene complement(843311..843724) /locus_tag="lmo0817" /db_xref="GeneID:985387" CDS complement(843311..843724) /locus_tag="lmo0817" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PhnB protein" /protein_id="NP_464344.1" /db_xref="GeneID:985387" /translation="MSFAVPYLVFNGEGQDALTFYADVFQAKITSVQRFKEMNNFDGD AVFGERLMHSRLAKNGEEFIYITDAPYDGFTIGNRVTILINFETEDDIKYAYEVLSAT GKVEMELQVAFWGSTYAQVTDRFGVFWQLNFDKKS" misc_feature complement(843329..843712) /locus_tag="lmo0817" /note="Escherichia coli PhnB and similar proteins; Region: PhnB_like; cd06588" /db_xref="CDD:319899" misc_feature complement(order(843335..843337,843365..843367, 843452..843454,843464..843466,843470..843487, 843533..843535,843542..843547,843650..843652, 843698..843712)) /locus_tag="lmo0817" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319899" regulatory complement(843732..843737) /regulatory_class="ribosome_binding_site" regulatory 843936..843941 /regulatory_class="ribosome_binding_site" gene 843949..846579 /locus_tag="lmo0818" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985383" CDS 843949..846579 /locus_tag="lmo0818" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cation-transporting ATPase" /protein_id="NP_464345.1" /db_xref="GeneID:985383" /translation="MLWVKESIEQLLSKLHTNLDTGLTKEQVKQKHAEFGTNEFEEGK KESLLQKIGHHLVEITTIVLLFAAAISAYLAITTGYGWAKVVVILGIVVLNMVLGIYQ ENSAEKALAALQSMNAHLTTVIRDGVRMQVDATELVPGDIIEIVAGDMIPADARIISS SSLQVEESALTGESVPVEKDANAVVSEKAPIGDRLNMLYSGCLVTNGRATAVVVEIGM ETEMGKIAGLLNSTSKLMTPLQLRLKELAKRLSIVALLAGILIFIIDVYVYGETIIET LMIAISLAVAAVPETLPVIVTLTLAYGVQNMVRKNTIIRRIPAVETIGNTSVICSDKT GTLTQNKMIIQQIWAADHTPIKATAEFDTAEQKVLEMLSLSSNATIDVTDGEETIIGD PTESAIIRLLEEKGTTKKALEAKYPRVFELPFDSDRKLMTTIHQVEDGFLSITKGAFD RIPVNFSEAFLAEAERVHDSFAEDALRVLVVAYKKYPEMPTDLSSEALETDLTFAGMV GMIDPPRPESKAAVLAAKKAGIKTVMITGDHIVTASAIAKEIGILTDGDKAITGAELA EMSEADLEKNIRDYAVYARVSPEDKIRIVKAWQKNGEIVTMTGDGVNDAPALKAADVG AAMGITGTDVSKNAADMVITDDNFATIVDAVKEGRTAYENIRKTIYFLLSTNFSQIFI MLIAIILGWGAPVVAVQLLLINVVSDGIPGFFLSREKADDSIMERKPIPKNAGIFANG LGKKMATQAVVFTIVTLAGFYIGQFVTINNSIGASYEVGMTMAFVILAWSSVAHIFNV RSDKSIFTIGFLSNRGLFFSAICSMLIILGLAIIPPLANMFFLVEMSLTHWILAFILS MFPLLFVEIQKLIQRKRAKA" misc_feature 843955..846573 /locus_tag="lmo0818" /note="Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism]; Region: MgtA; COG0474" /db_xref="CDD:440242" regulatory 846580..846585 /regulatory_class="ribosome_binding_site" gene 846594..847442 /locus_tag="lmo0819" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985382" CDS 846594..847442 /locus_tag="lmo0819" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0819" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464346.1" /db_xref="GeneID:985382" /translation="MNETEKLVAALLERNFGKNIGTRYPGNEAAQMRAEEVIGEIAIV IAPLVEKLGIENKTVKKTIPFLYELQKNQFCDMSAYPYPLLLVNGTSTDTEKYWRDLP TYWTDDANKIVLPYVLEHIKNNKVRQKLLAFHAWLLGEVVEMNEALGADFRVKLVFES DMRIRLRVYEVEQIAIEVHFLDNHDTEQQHLGYDVSLDADFTEKARLLLRQGILTENL GLEALKAYMKSVLPIAHSLKNLEHLTFEETKKLTKLLTQEEPKIMEDTDLTSKALDFL QKAAQQ" regulatory 847444..847491 /regulatory_class="terminator" regulatory 847538..847543 /regulatory_class="ribosome_binding_site" gene 847552..848109 /locus_tag="lmo0820" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985380" CDS 847552..848109 /locus_tag="lmo0820" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_464347.1" /db_xref="GeneID:985380" /translation="MIRHAKKSDAPKIAPLLLVIWKDMELPILEVETEEAITNALIEA IQTEDYRYSYRHLHVYEKEGDIAGVLAGYPGKIEPEIDRAWNEIAKKHGIRYEEPIFA DKETFPGEWYLDSIVTNEKYRGHGVGTALLAKLTEIAAEDGEKVVGLNCDKGNPHAKR LYERLGFHVTGEITLSGHEYEHMQK" misc_feature 847552..848070 /locus_tag="lmo0820" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" misc_feature 847873..848106 /locus_tag="lmo0820" /note="Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]; Region: RimI; COG0456" /db_xref="CDD:440224" regulatory 848113..848118 /regulatory_class="ribosome_binding_site" gene 848126..848788 /locus_tag="lmo0821" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985377" CDS 848126..848788 /locus_tag="lmo0821" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0821" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464348.1" /db_xref="GeneID:985377" /translation="MKKIIFTVVLSLVLVLAGCADVTNTVKVDKKGEATISFDIDISS VAGIFASSYSDEVEAKLKEAGFTVDKKSNTSYHIEKKVDKNETTKSDMKPEDFGVKIT NSKSFFTQKIKVDADIDIEKIWKKEVADVPFPKEILSQVDYTFILDLPISSIGENNAK SVDGGKLTWDVPLDKKSEMYFEVTVPNVKNIAIVGGILLVVIIGLFIYLIRRHRKKKK QL" misc_feature <848696..848782 /locus_tag="lmo0821" /note="Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases; Region: TM_EGFR-like; cd12087" /db_xref="CDD:213052" regulatory complement(848787..848827) /regulatory_class="terminator" regulatory 848793..848823 /regulatory_class="terminator" gene complement(848804..849193) /locus_tag="lmo0822" /db_xref="GeneID:985376" CDS complement(848804..849193) /locus_tag="lmo0822" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464349.1" /db_xref="GeneID:985376" /translation="MQQTIKEASEHTGLSAHTIRYYEREGLIPFLARDKNNNRIFDND ALHWLELLTCLRVTGMPLAKQKEIVELTKGGDGTVSERIAVLKEHQQDMYRRQAELDR AFKKIEKKLACYEELEQEVNKSVDQFS" misc_feature complement(848849..849184) /locus_tag="lmo0822" /note="Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB; Region: HTH_YyaN; cd01109" /db_xref="CDD:133384" misc_feature complement(order(849077..849085,849134..849136, 849176..849184)) /locus_tag="lmo0822" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133384" misc_feature complement(order(848882..848887,848894..848896, 848906..848908,848924..848926,848936..848938, 848990..848992,849017..849022,849032..849034, 849041..849043)) /locus_tag="lmo0822" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:133384" regulatory complement(849202..849207) /regulatory_class="ribosome_binding_site" regulatory 849300..849305 /regulatory_class="ribosome_binding_site" gene 849314..850138 /locus_tag="lmo0823" /db_xref="GeneID:985374" CDS 849314..850138 /locus_tag="lmo0823" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_464350.1" /db_xref="GeneID:985374" /translation="MNLKDTVKLANGVEMPRLGFGVWKVQDGDEAVNSVKWAIEAGYI SIDTAAAYKNEEGVGQAIKESGIKREDLFVTTKLWNAEQGYESTLAAFDESLRKLELD YVDLYLIHWPVKGKFKDTWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDAEIAPMVN QIELHPQLTQEPLRKFCAENNIVVEAWSPLGNGKLLSNPEIKAIADAHGKSVAQVILR WDLQIGVVTIPKSVHQERIIQNADIFDFELTEEEVAKISGLNKDERTGPDPDNFNF" misc_feature 849332..850129 /locus_tag="lmo0823" /note="AKR5A family of aldo-keto reductase (AKR); Region: AKR_AKR5A1_2; cd19156" /db_xref="CDD:381382" misc_feature order(849374..849382,849452..849454,849464..849469, 849542..849544,849548..849550,849641..849646, 849728..849733,849794..849796,849872..849892, 849899..849901,849950..849952,849995..850012, 850019..850021,850028..850033,850127..850129) /locus_tag="lmo0823" /note="active site" /db_xref="CDD:381382" misc_feature order(849452..849454,849467..849469,849542..849544, 849641..849643) /locus_tag="lmo0823" /note="catalytic tetrad [active]" /db_xref="CDD:381382" regulatory 850149..850188 /regulatory_class="terminator" regulatory 850203..850208 /regulatory_class="ribosome_binding_site" gene 850216..851184 /locus_tag="lmo0824" /db_xref="GeneID:985373" CDS 850216..851184 /locus_tag="lmo0824" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0824" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464351.1" /db_xref="GeneID:985373" /translation="MDAKTIIENRFQSQKLIQTAWSGSPERIVFHFGAMQAQNYGQSL WAVGSRMTTPSEKAVEQAINNGEIIRTWLLRGTIHLFSAKDYHWMMDLIAPTIDKICK PYRAKLDLTEEVLQKAIEVVSEIVSEQAVTRKDLAAHLATKDLPSAGIAFAQLLVYLS SRKVICSGPDETFRNTTHIPADTNHFTREEALKELAKRYIQSHAPATLKDFCFWSGLT VTDAKIGLADMPKIGDYYITTLVKNGTMLATIPLAGFDEWIIGYRDRSAVLPEIWHDE IMTKNGIFRPAIITNGEVVGKWEKPKKRAELEGDFWDRYIQFRNML" misc_feature 850306..851130 /locus_tag="lmo0824" /note="Winged helix DNA-binding domain; Region: HTH_42; pfam06224" /db_xref="CDD:428834" regulatory 851209..851214 /regulatory_class="ribosome_binding_site" gene 851225..852505 /locus_tag="lmo0825" /db_xref="GeneID:985372" CDS 851225..852505 /locus_tag="lmo0825" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="3-hydroxy-3-methylglutaryl-CoA reductase" /protein_id="NP_464352.1" /db_xref="GeneID:985372" /translation="MNAFDKFYKKTVEERHAILAEYADLNEEEQAFLASTGALSFDKA NHMIENTIGIYSLPLGLGMNMLLNDKRYVVPMAMEEPSVVAAQSAGAKLIAQNGGITG SATKRKMIGQIELISVSDIQAAKENIIANEEQLIAIANQAHPSLQKRGGGAVKIQVRT AQTANDETLFIVHLLVDTQEAMGANMVNTMVETLAPELEMLTNGTANMRILSNLVDEA TATAVCRINPESLATKTQSGEWVRDRIIAAYEFADADIYRAATHNKGIMNGIDAVIMA FGNDWRAVEAASHAYAARTGSYKPMSKWSKDADGYLVGELTLPMPVAFVGGSIAIHPI ASLSKKIARVESAKELAMLVCAVGLTQNLAALKALVTEGIQRGHMSLQAKSLAMTAGA EADEIEIVATFLQESKQLNVVAAKEFIAKLRSEK" misc_feature 851240..852493 /locus_tag="lmo0825" /note="Class II hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR); Region: HMG-CoA_reductase_classII; cd00644" /db_xref="CDD:153082" misc_feature order(851243..851245,851258..851260,851267..851272, 851321..851323,851345..851347,851354..851359, 851363..851407,851453..851479,851552..851554, 851558..851560,851564..851566,851705..851707, 851735..851737,851741..851743,851843..851863, 851951..851953,851960..851968,851972..851977, 851984..851989,851993..851998,852002..852007, 852014..852016,852023..852028,852035..852037, 852047..852052,852062..852073,852077..852082, 852089..852091,852101..852103,852110..852112, 852116..852118,852206..852208,852218..852220, 852224..852229,852329..852331,852338..852349, 852359..852361,852365..852370,852374..852379, 852386..852391,852461..852463) /locus_tag="lmo0825" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:153082" misc_feature order(851462..851464,851660..851662,851669..851671, 851759..851782,851786..851788,851855..851857, 851861..851863,852005..852007,852014..852016, 852062..852064,852071..852073,852197..852205, 852356..852358) /locus_tag="lmo0825" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:153082" misc_feature order(851462..851464,852014..852016,852062..852064, 852356..852358) /locus_tag="lmo0825" /note="catalytic residues [active]" /db_xref="CDD:153082" misc_feature order(851462..851464,851996..851998,852005..852010, 852014..852019,852026..852028,852317..852319, 852329..852331,852344..852346) /locus_tag="lmo0825" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:153082" misc_feature 852347..852394 /locus_tag="lmo0825" /note="flexible flap; other site" /db_xref="CDD:153082" regulatory 852693..852698 /regulatory_class="ribosome_binding_site" gene 852704..854338 /locus_tag="lmo0826" /db_xref="GeneID:985369" CDS 852704..854338 /locus_tag="lmo0826" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_464353.1" /db_xref="GeneID:985369" /translation="MGDINIQQMIFQFIGGLGIFLFGIKYMGDGLQMAAGDRLRDILD KYTTNPFMGVLAGILVTVLIQSSSGTTVLTVGLVSAGFMTLKQAIGVIMGANIGTTVT AFIIGIKLSEYSLPIIAVGAVLLFFFKNHKVKNIGQVFFGFGALFYGLDLMGQGMKPL AGMESFHELTAQMSTNPFLGLLIGTIFTAVVQSSSATIGILQELYGQGAIDLQAALPV LFGDNIGTTITAVLAAIGASVAAKRAAATHVIFNLIGAIIFMLILPLFTSLVAYLQGM FGLNPEMTIAVAHGTFNITNTFIQFWFIGAFAWLVTKLIPGDDSRIDYKTKHLDTNLI DQSPGIALEMAREETLRMADYAKFGLQEARQYLVNRDSKHAESTVQVEEAVNNLDRKI TEYLTKISSVALTNNETEEHALMLDTVRDIERVGDHMENIVENIDQLIKNKAKMSEEA SEQLIEMFELTTANFERAVKSMHKKDRALAEETILVEKDIDKAERRLRKNHIRRLNEG KCQVVSGILYIDIVSDLERIGDHANNIAESVLELNE" misc_feature 852716..854335 /locus_tag="lmo0826" /note="Na+/phosphate symporter [Inorganic ion transport and metabolism]; Region: NptA; COG1283" /db_xref="CDD:440894" regulatory 854430..854435 /regulatory_class="ribosome_binding_site" gene 854443..854748 /locus_tag="lmo0827" /db_xref="GeneID:985368" CDS 854443..854748 /locus_tag="lmo0827" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_464354.1" /db_xref="GeneID:985368" /translation="MSTRVMYPAEIKEKAIKMKLAGKSTKEIMRTLNIKNPTQVKTWW RWYRNEETHRFHQGVGKQYKYQKGVPELPEIEQLKIALRQKELELEILKKYKALERK" misc_feature 854476..>854592 /locus_tag="lmo0827" /note="Helix-turn-helix domain; Region: HTH_28; pfam13518" /db_xref="CDD:463908" regulatory 854736..854740 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0827" gene 854745..855581 /locus_tag="lmo0828" /db_xref="GeneID:985365" CDS 854745..855581 /locus_tag="lmo0828" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_464355.1" /db_xref="GeneID:985365" /translation="MNPAYFVLLVEELKTKYLVKDICQILQVPLSTYYRWKKKDFSQS SLEKKIGQLCKAYQFTYGYRKIAALMKQEEQVGINKVQRIMQKYQWQCQVKVKKKNRP GSAYYQTENHLNRNFQASQPLEKLTTDITYLYFGDCRLYLSSIMDLYNGEIVAYSIGE KQDTELVLDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNA PIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQ AA" misc_feature <854763..855566 /locus_tag="lmo0828" /note="IS3 family transposase; Region: transpos_IS3; NF033516" /db_xref="CDD:468052" misc_RNA 855393..855495 /locus_tag="lmo0828" /product="rli35" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985365" regulatory 855742..855747 /regulatory_class="ribosome_binding_site" gene 855759..859406 /gene="nifJ" /locus_tag="lmo0829" /db_xref="GeneID:985364" CDS 855759..859406 /gene="nifJ" /locus_tag="lmo0829" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="pyruvate-flavodoxin oxidoreductase" /protein_id="NP_464356.1" /db_xref="GeneID:985364" /translation="MRNRKTMDGNTAAAYISYAFTEVAAIYPITPSSTMAELVDEWSS KNKKNLFNEPVKVVEMQSEAGAAGTVHGSLQAGALTSTYTASQGLLLMIPNMYKIAGE LLPTVFHVSARTISAASLNIFGDHSDVMAARQTGFAMLAEGSVQEVMDLSAIAHLASL KGSLPFLNFFDGFRTSHELQKIEVLEYDELENLLDKEALQQFRNRAMTPNNPKTLGSN QNPDIFFQQRETVNRYYEEIPSIVQNYMQEINQLRGTDYDLVNYYGAEDATDVIVAMG SVTPVIEQVIDYLTTQGKKVGLLNIRLYRPFPAENFLTKLPKTVERVAVLDRTKEPGS GGEPLLLDVQSVLYDSETRPLVIGGRYGLGSKDVTPDQILGVYSHLMTEKPKPRFTIG ITDDITNLSIENDGPSDLTSEKTFQCKFWGFGSDGTVGANKAAIKIIGDNTDLYAQGY FSYDSKKSGGLTVSHLRFGEKRIRSAYLIQQADFVSCSTSAYLRSYDLLKGLKPGGTF LLNTIWEGEQLERHLPAAMREYIAKNNIQFYTLNAMRIAGEAGLGRRINTVMQTAFFR VTDILPFEKALADLKASAIATYGKKDMAVAEKNILAMDQTVANLHKVEVPASWANPVV TAETNATTEKPAYVQNILEPVNRLEGDNLTVGDLISNGMVSGAYPPGTAAYEKRGIAL EVPEWISENCTMCNECAFVCPHAAIRPILTDEEEMESAPEGFMTREMRGKDGLRYRIQ VSPMDCTGCNLCAETCPAKDKALVMKPFEEVAAKENPNWSFAINVKPKKNPGKKNTVP GSQFEQPLLEFSGACAGCGETPYVKLLTQMFGDRMMIANATGCSSIWGASAPATPYTV NDKGHGPAWGNSLLEDNAEYGYGMYLANQTMRKALNNKVTKALREEAMSETLREALVD WQLQMDVSEDTRERAEALQLALLSEMEDSAALESIYNDRELFIKRSQWMLGGDGWAYD IGFGGIDHVLASGEDVNIFVMDNEVYSNTGGQSSKATPTAAIAKFASGGKSVGKKDLG IMAMSYGNIYVAQIAMGANKRQTLKAIEEAEAYPGPSLIIAYTPCINHGISSGMKTML SETQKAVECGYWSLYRYNPALEEKGKNPMTMDYKKVDFDQFEDFLKRETRYSALYKAN PEVATKLSEKTRLDAEKRFKRYATMAGLDLEKIWKKKEAIEDVKAPVDDERAARKAAR EARRLAREQGK" misc_feature 855771..859277 /gene="nifJ" /locus_tag="lmo0829" /note="pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; Region: pyruv_ox_red; TIGR02176" /db_xref="CDD:131231" regulatory 859412..859448 /regulatory_class="terminator" gene 859444..859527 /locus_tag="lmos31" /db_xref="GeneID:18245136" misc_RNA 859444..859527 /locus_tag="lmos31" /product="rli36" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245136" gene complement(859656..861617) /gene="fbp" /locus_tag="lmo0830" /db_xref="GeneID:985361" CDS complement(859656..861617) /gene="fbp" /locus_tag="lmo0830" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="fructose-1,6-bisphosphatase" /protein_id="NP_464357.1" /db_xref="GeneID:985361" /translation="MKTIDMKYLRLLAKEYPTIAKTATEIINLEAIMNLPKGTEHFLS DVHGEYSAFEQVLRNGSGVVKRKIRDIFGAELDDAEINSLSTLIYYPEEKMDLIASET EDLHAWYRTTLFRLIELCQYVASKYTRSKVRKAMPEDFAYILEELLHENYNEDDKKLY YEEILQHIISLGRAEEFISALSLLIQQLVVDHLHIVGDVYDRGPYPDKIMDTLMNYHS LDFQWGNHDILWMGAASGSRVCAANVIRISARYLNLDILEDSYGISLRPLALFADEVY KDDPCTYFQPKNEENINYSNAEITQIARMHKAISIIQFKLEGEIIKRRKEFDMNHRLL LQFIDYKKGTIQLKGKEYQLLDNHFPTINPENPYELTDAERELIGKITAAFKNCRRLQ KHVQFLYSKGSMFLTYNGNLLYHGCIPLHKDGTFMEMKLRGEKYAGRALLEQFEILTR EAYVRPTGTKEKKYACDIVWYLWTGAISSLFGKSEMTTFERYFVAEKETHTEEKNPYY KLRNNELICKQILEEFELDGECGHIINGHTPVKEGKGESPIKASGKMLVIDGGFAKAY HKETNLAGYTLLFNSYGLQLVSHQPFTTKEDAIKNETDILSTRQVIEMEINRKRVRDT DIGAKLSEQAEDLKLLLDAYRNGLLHENR" misc_feature complement(859659..861617) /gene="fbp" /locus_tag="lmo0830" /note="Fructose-1,6-bisphosphatase [Carbohydrate transport and metabolism]; Region: Fbp2; COG3855" /db_xref="CDD:443064" regulatory complement(861628..861633) /regulatory_class="ribosome_binding_site" regulatory complement(861702..861730) /regulatory_class="terminator" gene complement(861731..862642) /locus_tag="lmo0831" /db_xref="GeneID:985359" CDS complement(861731..862642) /locus_tag="lmo0831" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0831" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464358.1" /db_xref="GeneID:985359" /translation="MEFLLILLPVFGIFAIGFVGQKTLKFDIPNLSKLTLYLMSPFLA FNTFYTNPLTIDYAYLAIYIFALCLSLILLVSLISFLLGYNLQDRCALILASAFMNNG NYGTPVVLLVFGAVGLDIAVVLMVLQQLAMSTIGIYFAAKGSKDANGMKTVMKRVVRM PIAYGALLGLALQLLHVSLPSALMTCVKLVGDAAIPTIMIVLGMQLAVISFRRIELTK VGIALVLKLLIAPIIAFGLTLILPVDEMTKQIMILLAAMPTAANTTLMAVQFDTKPDL VSSATFISTVLSIITLPIVLYFLHPVF" misc_feature complement(861737..862642) /locus_tag="lmo0831" /note="Predicted permease, AEC (auxin efflux carrier) family [General function prediction only]; Region: YfdV; COG0679" /db_xref="CDD:440443" regulatory complement(862649..862654) /regulatory_class="ribosome_binding_site" regulatory 863306..863311 /regulatory_class="ribosome_binding_site" gene 863322..863606 /locus_tag="lmo0832" /db_xref="GeneID:985355" CDS 863322..863606 /locus_tag="lmo0832" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_464359.1" /db_xref="GeneID:985355" /translation="MPKKLYNEKFKKSLVYLYHKGTSKHTLCNDFGVSIASLTRWIKF YNTENIDLNEATNILQMYELKKQKKVLEAEISALSEAISIFNMETSIAEN" misc_feature 863322..863576 /locus_tag="lmo0832" /note="Transposase InsE and inactivated derivatives [Mobilome: prophages, transposons]; Region: InsE; COG2963" /db_xref="CDD:442203" regulatory 863613..863649 /regulatory_class="terminator" regulatory 863784..863789 /regulatory_class="ribosome_binding_site" gene 863798..864688 /locus_tag="lmo0833" /db_xref="GeneID:985354" CDS 863798..864688 /locus_tag="lmo0833" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464360.1" /db_xref="GeneID:985354" /translation="MVAYGELIREVRLSKGLTQKEVYTGVISKSYAIGFEKGKHDITL VLFEEILERVMLSSDEFFFMNRGYSLAEEDNFWYKFANAANQKSLAELQELYQEVLQQ NGDRANLRKAIVHSRIEINEQFLLNNRFDVSIVSEEDKAVIQTYLWKVQSWTLEEIRI FANSVDYFEEDVQIYFFQLVLKSLEKYKHYDRGKKVFSTLLTNIIEELITRDQLEYAA QLLEILHELSSTHDCAFYRIMHNYYQGLIWMKNDEVEQGLKESKSAIRILDALDYKSL ALLYNTLLQQFLEKENIQIV" misc_feature 863810..863980 /locus_tag="lmo0833" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cd00093" /db_xref="CDD:238045" misc_feature order(863822..863824,863834..863836,863906..863908) /locus_tag="lmo0833" /note="non-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" misc_feature order(863831..863833,863903..863905) /locus_tag="lmo0833" /note="salt bridge [active]" /db_xref="CDD:238045" misc_feature order(863852..863857,863885..863887,863894..863896, 863906..863911) /locus_tag="lmo0833" /note="sequence-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" misc_feature 863984..864667 /locus_tag="lmo0833" /note="transcriptional activator, Rgg/GadR/MutR family, C-terminal domain; Region: RGG_Cterm; TIGR01716" /db_xref="CDD:273772" regulatory 864696..864730 /regulatory_class="terminator" regulatory 864810..864816 /regulatory_class="ribosome_binding_site" gene 864824..865537 /locus_tag="lmo0834" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985353" CDS 864824..865537 /locus_tag="lmo0834" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0834" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464361.1" /db_xref="GeneID:985353" /translation="MLNQKYQLLLHNEYDTKSGDLVKKEIVATKKTKNLLEDLTSHLL CVTNQIEYGKFITWYEMEIKKVLQVHPNQHFIIKISFQQLYFRETMLLLENLQKDSRR LTIELVGDSQISPYSKEHFSAEDSDAFLKGKLKMLKKWHYFISKHIESGAIEQTLIFT PYIDELKYSLTQKSKLLHNITELKFFLSFWKNWAELRFVDFLVLVDEKNEFVSHVLLP DELNVRCKMYENFGGMVSE" gene 865530..866534 /locus_tag="lmo0835" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985352" CDS 865530..866534 /locus_tag="lmo0835" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan binding protein" /protein_id="NP_464362.1" /db_xref="GeneID:985352" /translation="MSKNVKKIVITLFALIMTVGLASGFIAPIKASADTNNFTVKVEY VDADGAEIAPSDILTDYHYVSTPKDIPGYKLREIPHNATGNITDTGIIVRYIYDKTID VRYVDETGKDLLPVVEIINSEAAVLETISDYTFVKKDISIDGLHIIFRYKKNISTIPD FGKPNQVTVNYLDENKTPIAPSLYLSGLFNEAYNVPMKKIKGYTLLKYDSEILGVFTE SPQTINIIYQKKAPEQAPSMEPLPDPTVPESPQVEKSKIKKSKIETTEKRTTSKVKIA PKALKLTKVEQKKQETKDSLPKTGDSSVNLLITCLGIIAISCGVYLLVQQSQKRRRKE " misc_feature 865653..865820 /locus_tag="lmo0835" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 866031..866213 /locus_tag="lmo0835" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 866391..866531 /locus_tag="lmo0835" /note="LPXTG cell wall anchor motif; Region: Gram_pos_anchor; pfam00746" /db_xref="CDD:366278" regulatory complement(866534..866571) /regulatory_class="terminator" regulatory 866545..866571 /regulatory_class="terminator" gene complement(866577..866990) /locus_tag="lmo0836" /db_xref="GeneID:985351" CDS complement(866577..866990) /locus_tag="lmo0836" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphate-starvation-inducible protein PsiE" /protein_id="NP_464363.1" /db_xref="GeneID:985351" /translation="MKRLEKISSIVPILLRITLNLALIMVGFTLVAFLIREAFTIFNN IFFLDTDVSYYYMTQDILTFFLYFEFIALIVKYFESHFHFPLRYFIYIGITAIIRFII VDHSSATSTLILSGAILLLVAALFLANTKMLKREG" misc_feature complement(866583..866981) /locus_tag="lmo0836" /note="phosphate-starvation-inducible protein PsiE; Provisional; Region: PRK02833" /db_xref="CDD:235075" regulatory complement(866997..867002) /regulatory_class="ribosome_binding_site" gene 867163..868800 /locus_tag="lmo0837" /db_xref="GeneID:985348" CDS 867163..868800 /locus_tag="lmo0837" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475632.1" /db_xref="GeneID:985348" /translation="MELAFPVAVNHVIDTLLPGKDFGLIITAALALLFFYILNTFMQY IVTYFGHMLGLNIETDMRRDLFSHLQKQPFGFYDNQKTGKLMSRMTTDLFEIGEVAHH GPEDIFISIMSLFGAFFLMLNINVKLAISTFILVPILTVLIVYFNKRMTKVTTGIFKD LGNFNAGVENAISGVRVVQAFANEPHEKGRFKVLNQAYRKSKLMFYKVMGLSFSFNYF LMRLISLFALLFGAYFTINGEISYGEFVGFILLTNVFIRPIEKINNVIESYPKGFAGF KRFLEVMDTEPAIQDEKDAKPAEAFRGDIAYNQVSFEYSDGKNVLNHINLSIKAGETV AFVGPSGAGKTTICNLLPRFYDVSAGEITIDGENIKRFTLPSLRAQIGVVQQDVFLFS GTVRENIAYGKLDASDEEIEHVVKLAHLSKVVEEMPDGLDTIIGERGVKLSGGQKQRL AIARMFLKNPPILILDEATSALDTETEQVIQASLEELAEGRTTLIIAHRLATIKHADR IIVVNETGIAETGTHDELLAQDNGAYKRLYDAQFNTI" misc_feature 867163..868788 /locus_tag="lmo0837" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:440747" regulatory 868847..868893 /regulatory_class="terminator" regulatory 869080..869085 /regulatory_class="ribosome_binding_site" gene 869095..870480 /gene="uhpT" /locus_tag="lmo0838" /db_xref="GeneID:985347" CDS 869095..870480 /gene="uhpT" /locus_tag="lmo0838" /experiment="EXISTENCE:[PMID:19448609]" /note="cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate" /codon_start=1 /transl_table=11 /product="sugar:phosphate antiporter" /protein_id="NP_464364.1" /db_xref="GeneID:985347" /translation="MSLFSLKKKNHFVPLEIQRQQWFKHFIVAFMSVFICYLTVYLLR NNFKAAQTLLIEQNHFSTTELGMIGLAFSVMYGIGKTILGYVVDGRNAKKIMSFLLGI SAIISIIIGILLVAKQATVGILFILWGANGFVQSPGGPASYSTITRWTPKLKRGRWLG FWNASHNIGGALAGIVAFWGATTFFNGGAGGMFIVPGIIAIIIAIICFSVGHDEPEEL GWNSAAEIFEEREEQGESETKDLSRFQILCRFVINNPWVWTLCVINIFIYIVRIGIDN WAPVYCIQALGWSTKDAIMTISFFEIGALLGSLSWGWLSDIMKGRRMLCSIIAVVIEF FMLISYSQVTSVYSMYTVLFILGFLVFGPQLLIGVSVIEFVPRNALAVTNGLTGTFAY LFGDSFAKVFLGYIADPTKAGMQIFGYNLHGWGATFTIMFTALIIAGLMMIPVALKQE KIIRQAKVLHL" misc_feature 869095..870465 /gene="uhpT" /locus_tag="lmo0838" /note="hexose-6-phosphate:phosphate antiporter; Region: uhpT; PRK09556" /db_xref="CDD:236564" regulatory 870515..870553 /regulatory_class="terminator" regulatory complement(870515..870552) /regulatory_class="terminator" gene complement(870587..871807) /locus_tag="lmo0839" /db_xref="GeneID:985342" CDS complement(870587..871807) /locus_tag="lmo0839" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="tetracycline resistance protein" /protein_id="NP_464365.1" /db_xref="GeneID:985342" /translation="MFQSKSRTSLTNKKTLLFGLISVFLCGMGFSIIMPVVPFLVTPY VTNASDQALMVTLLTSVYAFCVFFAAPGLGALSDRFGRRPVLLICFIGSAIGYFIFGL GGALWVLFLGRIIEGITGGSISTLFAFFADITPQEERTKYFGWVSAAAGAGAALGPAF GGLLAHFGYAMPFFFGATITFINFLFGYFYMPESLDDANRLKRIPLMRLNPFSQLLNI LTIKNLGRLLIAAFFIWVPNGSLQAVMSQFAIDSFSWKPALIGMMFSIMGIQDILSQA FVMPKLLIRLTDKQIAVLGMIAEIIGYSLIATSSIFTLAPLLVIGMFVFGFGDSIFGP SFNGMVSKAASASEQGRIQGGSQAIQSLARIIGPIIGGQIYITLGHAAPAIMGVLLIT VAIFILYKKTSLAK" misc_feature complement(870608..871750) /locus_tag="lmo0839" /note="Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; Region: MFS_SLC46_TetA_like; cd17330" /db_xref="CDD:340888" misc_feature complement(order(870716..870718,870725..870730, 870737..870742,870749..870751,870797..870799, 870809..870811,870821..870826,870983..870985, 870995..870997,871079..871081,871088..871096, 871103..871108,871115..871117,871346..871348, 871355..871360,871367..871369,871424..871426, 871433..871441,871445..871450,871598..871600, 871706..871708,871715..871720,871727..871732)) /locus_tag="lmo0839" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340888" regulatory complement(871813..871818) /regulatory_class="ribosome_binding_site" regulatory complement(871894..871930) /regulatory_class="terminator" gene complement(871940..872410) /locus_tag="lmo0840" /db_xref="GeneID:985341" CDS complement(871940..872410) /locus_tag="lmo0840" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0840" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464366.1" /db_xref="GeneID:985341" /translation="MDKNEQVMANVRDLFNKLAWINKVKMEKALEGYKPSEVHCIEYI AKNEDPNVTKLAEAFYMTKSAISKITKKLMDKGYIESYQKPENKKEIYFRLTTKGAEI NQVHDELHQEFLDRDKVVFEDISDEQYAEVLKFVDKYSRHLDNEMKKVLKTKSE" misc_feature complement(872027..872320) /locus_tag="lmo0840" /note="helix_turn_helix multiple antibiotic resistance protein; Region: HTH_MARR; smart00347" /db_xref="CDD:197670" regulatory complement(872418..872423) /regulatory_class="ribosome_binding_site" regulatory 872601..872606 /regulatory_class="ribosome_binding_site" gene 872616..875258 /locus_tag="lmo0841" /db_xref="GeneID:985338" CDS 872616..875258 /locus_tag="lmo0841" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="calcium-transporting ATPase" /protein_id="NP_464367.1" /db_xref="GeneID:985338" /translation="MEIYRKSAAETFTQLEATEKGLTTSEVTKRQEKYGFNELKNKKK DPLWKLFLETFKDPMVIVLVIAALVQLVLGEVVESLIIFLVLIVNSIISVVQTRKAES SLDALREMSAPVAKVIRDGSKQSIHARELVPGDVVILDAGDFVPADGRLFESGSLKID EGMLTGESEAVEKYIDTIPDEVGLGDRVNMVFSGSLVVYGRGMFVVTGTASETEIGKI AGLLETAEAKQTPLQRKLESFSKKLGLGILALCVLIFAVEAGRVLLGDNSADMATAIL NAFMFAVAVAVAAIPEALSSIVTIVLAVGTNKMAKQHAIIRKLPAVETLGSTSVICTD KTGTLTQNKMTVVDYYLPDGTKENFPESPENWSEGERRLIHIAVLCNDSNINSEGKEL GDPTEVALIAFSNKNNQDYNEIREKFIREGEIPFDSDRKLMSTLHTFNENKAMLTKGG PDVMFARCSYVFLDGEEKPMTEEILAKLKETNEEFSNQALRVLAYGYKRMPADTTELK LEDEQDIVLVGLTAMIDPPREAVYASIEESKKAGIRTVMITGDHKTTAQAIGRDIGLM DADDIALTGQELDAMPEEELDKKLEHIAVYARVSPENKIRIVKAWQKKGKITAMTGDG VNDAPALKQADIGVAMGSGTDVAKDSAAMILTDDNFVSIVDAVGVGRTVFDNIKKSIA YLFAGNLGAIIAILFALVLDWINPFTALQLLFINLVNDSLPAIALGMEKAEPDVMKRK PRDINEGIFAGGTMRAVISRGVLIGIAVIISQYIGMQISPEMSVAMAFTTLILARTLQ TFAARSNVQTAFGAGFFSNKYVIGAVLLCFVLYGITVLPGAREIFSIPASFGLHEWSI AAGLALAAVVMMEIIKVVQNKFFK" misc_feature 872619..875249 /locus_tag="lmo0841" /note="Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism]; Region: MgtA; COG0474" /db_xref="CDD:440242" regulatory 875269..875314 /regulatory_class="terminator" gene 875721..881855 /locus_tag="lmo0842" /db_xref="GeneID:985337" CDS 875721..881855 /locus_tag="lmo0842" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan binding protein" /protein_id="NP_464368.1" /db_xref="GeneID:985337" /translation="MIKATRARHYLMLLMAFFLVLGQLNLTALNVFAKENGNDELTYE VQSKLTEDKKSADLTIKVTPKSDQVKILTIETPDGEKREGQEVSYKAEKNGTTNFLIN YQNTSEEKAETKTYTASYEVSDIVSEDGVNKDSDTEKATEKEDANIQPPSTTNNTKNI KSLKSGQTTVELKIPDYDQTAWANGDIKEVTATVNFGDSTSTGKKVNFTLPDGMRFVS LPVPSNYQAGTNEDTGVLSYLGASDPLGIAITSVEVPNKETAYSQATFGTVSYELSPG TEKASFKFSVRVDAAKYYGPTDLADPIKTEVYKGEASTPVASADQAIRAEGNKVVGYA DQNHVKTMFRTWYNDQRLSEVLASTDTTDSYNYTKSYSVVNGSNSLDSRGAAVYIAKN IEVTLYYPEGMEFVNVVNNAGTVLKENSNVTITNYPSENKVVINNKHLNNSATSNSIY GVKYKVPKGTPAGTYSTAKAPHAVITTYDGEVFESDALTTNPNDLTTIAPLDTCKVVD TTENKMTLTTANGQLNPNNETWAGSIQINNKKSAGVKKNQMYQIKFDPNWEAYMVNIP FDSTISGNKISEVQYKTNLNDAFRTFDGALIKNNNQMYRLDAKAVGLEEGEYFTEVKA NVGDFAPGYQSTEASATYRWNSTASYGKIKPGVTSVQYEGAIWDADDESNTKVSGIST YKVSSAESTVANGTAAFYNKAGTKVKTASAGETINTKATLVLHDYPYGTRTVLNDPEV YLHALEGTTIQPSSIKLTDQGGKDVNFTVEQETANNGDKVYALKTTDVSVGVYVGYPT KHKYLNISYDTTFDVTLNKSINMDAQQVIAWGANVTPATGTNTFSDLGLDVNKNGRDN DKLLSVNSSTLSIPKQDTVTVETFLSVAGEGDKAAYMEGEDSTVSYFSPGTDADYTVK ITNTSSGNASTFELYIPIPKTGQDFGSKFQSEPFKWDMKLNGALPVSAEQQDQFDVSY ATTATGDNYDSTDIYSNTVADYEKVNMVRIKVKTQINAGETQTFKVPLKVDETFDSAT EGNKIGERDIYNPYYRVITNTFAGSLSGTKVGAELVIGEVAGMLFNDKDVNGSYEKDK GDEPLANETVELYKWNVSTSEYEPAKVGDKNITATTDSNGKYSFDYSDGVGYGNYAVK FPDKAGYQYTLKNIGKDTSLNSDVPYSGADRGWAKQINPTLPSSQYTNAGYYAYNPTQ DLKVNLDEKQVQMGRSLEITLPKVASTTGQAAEDTIEPSFFKNIKATTNGYKWTVADT KVATVQTLADGSAAVVGVSTNNKTIDVTDLTITIQDIFGTEKSSKAPVYVTGTDGTVA QQDGYTMGATDFSLEYKEATDLTKAQALTLAKTAAFEEVKDGVNSSAEDRLDQVQVNQ TQLDAIKNGSNQGGVYPLTYTITKDSKTVSVTIQVTVAKDLTAVNAHDSTIYLGDTWD AEDNFDSAANKEGDTNVAFSDVTVTGSVNTAVAGSYPVTYTYNGVSKKINVTVKDKLT AVNAHDSTIYTGDTWNAGDNFDSALDKDGNSVAFADITVTGTVNTNQAGTNTITYSYD GVSKTITVTVLENKEGISAHDSTIYVGDAWNAKDNFDSAFDKDGNAVDLEDVTVTEKP TVDTTKAGAYEVTYKYGKVSKKITLTVKAKLTAVNAHDSAIYIGDTWSAEDNFDSALD KDGNSVAFADIEVKGTVDTDKVGTYPVTYTYDGVSKTINIQVKDILTAVNAHDSEIYI GDNWNAKDNFDSAKDKDGNTVNWKDINVSENPAVDLETVGVYQVTYSYGGVSKTINLT VHPRKTSLEVHDSTMYTGDKWKAEDNFDNATDKKGDQIPFKDVTVTGQVDSKTAGTYE ITYIYDGLKKVARITVIQNQAQITVKDSVIPYGGKWEAEANFIGATNRDGVAIPFSKI KVDGTVDVNKAGTYKVIYTYDPNEGTVDAGKKQLSVTANIQVEAEIVKPIKPIKPIKP IKPVDPSKPIDPKKPVKSSNPTKPSTEKTPLKVVDNKQHTRTYEEAKPLPKTGDQTNT WVIWTGVCLLSMSLLLWVVMRGRKKNYQ" misc_feature 877788..>880403 /locus_tag="lmo0842" /note="Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only]; Region: RhsA; COG3209" /db_xref="CDD:442442" misc_feature 878943..>879230 /locus_tag="lmo0842" /note="SdrD B-like domain; Region: SdrD_B; pfam17210" /db_xref="CDD:435789" misc_feature 879987..880187 /locus_tag="lmo0842" /note="Bacterial Ig-like domain (group 3); Region: Big_3; pfam07523" /db_xref="CDD:400072" misc_feature 880209..880406 /locus_tag="lmo0842" /note="Bacterial Ig-like domain (group 3); Region: Big_3; pfam07523" /db_xref="CDD:400072" misc_feature 880431..880631 /locus_tag="lmo0842" /note="Bacterial Ig-like domain (group 3); Region: Big_3; pfam07523" /db_xref="CDD:400072" misc_feature 880653..880850 /locus_tag="lmo0842" /note="Bacterial Ig-like domain (group 3); Region: Big_3; pfam07523" /db_xref="CDD:400072" misc_feature 880872..881075 /locus_tag="lmo0842" /note="Bacterial Ig-like domain (group 3); Region: Big_3; pfam07523" /db_xref="CDD:400072" misc_feature 881097..881294 /locus_tag="lmo0842" /note="Bacterial Ig-like domain (group 3); Region: Big_3; pfam07523" /db_xref="CDD:400072" misc_feature 881316..881504 /locus_tag="lmo0842" /note="Bacterial Ig-like domain (group 3); Region: Big_3; pfam07523" /db_xref="CDD:400072" misc_feature 881739..881846 /locus_tag="lmo0842" /note="LPXTG-motif cell wall anchor domain; Region: LPXTG_anchor; TIGR01167" /db_xref="CDD:273478" regulatory complement(881890..881925) /regulatory_class="terminator" regulatory 881902..881937 /regulatory_class="terminator" gene complement(881992..882249) /locus_tag="lmo0843" /db_xref="GeneID:985333" CDS complement(881992..882249) /locus_tag="lmo0843" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464369.1" /db_xref="GeneID:985333" /translation="MILTIYLIAITLISFLLFAIDKRKAIKHAYRIPESVLLFSAFLG GAFGSWMSMQLFHHKTQKPKFRILVPLAMVWTVGVVVWWLY" misc_feature complement(882031..882249) /locus_tag="lmo0843" /note="Uncharacterized membrane protein YsdA, DUF1294 family [Function unknown]; Region: YsdA; COG3326" /db_xref="CDD:442555" regulatory complement(882258..882263) /regulatory_class="ribosome_binding_site" regulatory 882316..882321 /regulatory_class="ribosome_binding_site" gene 882328..882705 /locus_tag="lmo0844" /db_xref="GeneID:985332" CDS 882328..882705 /locus_tag="lmo0844" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464370.1" /db_xref="GeneID:985332" /translation="MAKEIIQTSSAPKALGPYSQAVKVNGLIFTSGQLGINPATGELV VGATKQAEQAFKNLAAVLEEAGSGLDKIIKATVFFKDLNEFKAVNEVYATFFSSDFPA RSAFQVAKLPLDAEIEIEVIAEA" misc_feature 882334..882699 /locus_tag="lmo0844" /note="reactive intermediate/imine deaminase; Region: TIGR00004" /db_xref="CDD:129116" misc_feature order(882379..882384,882391..882393,882397..882399, 882406..882408,882412..882414,882418..882423, 882538..882540,882544..882549,882553..882555, 882559..882561,882592..882594,882601..882603, 882628..882651,882679..882681,882685..882687, 882691..882693) /locus_tag="lmo0844" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100004" misc_feature order(882379..882381,882580..882582,882592..882594, 882634..882636,882679..882681) /locus_tag="lmo0844" /note="putative active site [active]" /db_xref="CDD:100004" gene 882770..882867 /locus_tag="lmos32" /db_xref="GeneID:18245137" misc_RNA 882770..882867 /locus_tag="lmos32" /product="SAM" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245137" regulatory 882948..882953 /regulatory_class="ribosome_binding_site" gene 882962..884065 /locus_tag="lmo0845" /db_xref="GeneID:985330" CDS 882962..884065 /locus_tag="lmo0845" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464371.1" /db_xref="GeneID:985330" /translation="MNQVAPFYADHVGSILRTKGIKDAREKFQSGEITALELRKIENT EIKYIVEKQKEVGLKSITDGEFRRAWWHFDFLENLDGVEGYDAAGGIQFSKVQTKSHS VKITGPIDFTTHPFIEDFIFLKEAVGDNHVAKQTIPSPAMLHYRGDIEYQPYLDDAEK FANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYK NLINEAIKHKPADMVITMHICRGNFRSTWIAEGGYGPVAETLFGKLNIDGFFLEYDNE RSGDFAPLKYVTRPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQC GFASTEEGNILTEEEQWDKLRYVVRLANDIWGE" misc_feature 882962..884056 /locus_tag="lmo0845" /note="The URO-D_CIMS_like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases, as well as cobalamine (B12) independent methionine synthases; Region: URO-D_CIMS_like; cl00464" /db_xref="CDD:469779" misc_feature order(882995..883003,883154..883156,883172..883174, 883514..883516,883520..883522,883670..883672, 883676..883678,883961..883966) /locus_tag="lmo0845" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:239427" misc_feature order(883670..883672,883676..883678,883775..883777, 883961..883963) /locus_tag="lmo0845" /note="zinc-binding site [ion binding]; other site" /db_xref="CDD:239427" regulatory 884155..884160 /regulatory_class="ribosome_binding_site" gene 884170..885270 /locus_tag="lmo0846" /db_xref="GeneID:985329" CDS 884170..885270 /locus_tag="lmo0846" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit C" /protein_id="NP_464372.1" /db_xref="GeneID:985329" /translation="MDDKLQKKLTLLPESPGCYIYRDENNEILYIGKSKCLKNRVKSY FHSKQIGKTARLVRQIRDLELIITTSEKEALLLEMILIQKYQPPFNIQLKEGTSYPYI KITNEKNPHIEVVFEVKRDGAHYFGPYPGRFSARQTVDLIEKLFPLCRCDGKPGRPCL YYHLGLCLGPCQAEIEPAVYKKQIHKISRFLEGDVKNVKDKLLGDMLTATENLEFERA AELRDKIHAINETIEKQHIIFPGLKNRDIIGCYEQDNYLSVFVFFVRNGAINGSKWHV FQVEKTLQEELATFLNQFYEDPNNIQPKELLIAEKIDKSLLNEPLRKACLFPQKGSKK KQVDLAIENAKSAYIAYAKMKEYDFEIQLNNH" misc_feature 884170..>885255 /locus_tag="lmo0846" /note="Excinuclease UvrABC, nuclease subunit [Replication, recombination and repair]; Region: UvrC; COG0322" /db_xref="CDD:440091" regulatory 885269..885303 /regulatory_class="terminator" regulatory 885427..885432 /regulatory_class="ribosome_binding_site" gene 885440..886882 /locus_tag="lmo0847" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985328" CDS 885440..886882 /locus_tag="lmo0847" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glutamine ABC transporter" /protein_id="NP_464373.1" /db_xref="GeneID:985328" /translation="MKKFSRFILMMAIACVAAFIFTGNGLNAKAAEEIYLIGTDTTFA PFEFEKDGEHVGIDMDILKAIAKDQNFKYEIKAMGFNAAVQALEANQVDGVIAGMSIT DERKQKFDFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKIKDK YDFDIVVFDDSAQMYDDVKTRNSVACFDDYPVLAYGVQTGNGLKIVTEKEKGNSYGFA VNKGKNQELLEKFNAGLVNIKASGEYEKILKNYLGKNAIKENTTEKGFMGIIKSSWPA LLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAF FFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQMEAARSLGLPH KKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMARTFESTW TWLIIGIMYLIVITILTKISDRLERRLRND" misc_feature 885542..886195 /locus_tag="lmo0847" /note="Glutamine-binding domain of ABC transporter, a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_GlnP; cd13619" /db_xref="CDD:270337" misc_feature order(885557..885559,885566..885568,885677..885679, 885728..885739,885752..885754,885872..885874, 885881..885886,886004..886006,886082..886084) /locus_tag="lmo0847" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:270337" misc_feature 886235..886873 /locus_tag="lmo0847" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" regulatory 886862..886867 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0847" gene 886875..887603 /locus_tag="lmo0848" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985325" CDS 886875..887603 /locus_tag="lmo0848" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter ATP-binding protein" /protein_id="NP_464374.1" /db_xref="GeneID:985325" /translation="MTKLKVTGLKKSFGANEVLKGIDIEVKEGEVVCVIGPSGSGKST FLRCMNNLEEITAGEVVVDDFNITDKKVDINKVRENIGMVFQHFNLFPHLSVLENITL APVELKKMDKEAAKSNALRLLEQVGLREKAEEFPNQLSGGQKQRVAIARALAMDPDIM LFDEPTSALDPEMVGEVLGVMKELAKGGMTMMIVTHEMGFAREVGDRVIFMDGGYIVE EGKPADIFDNPTNERTISFLDKVL" misc_feature 886884..887597 /locus_tag="lmo0848" /note="ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; Region: GlnQ; COG1126" /db_xref="CDD:440743" regulatory complement(887601..887646) /regulatory_class="terminator" regulatory 887612..887657 /regulatory_class="terminator" gene complement(887652..889502) /locus_tag="lmo0849" /db_xref="GeneID:985321" CDS complement(887652..889502) /locus_tag="lmo0849" /EC_number="3.5.1.4" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia" /codon_start=1 /transl_table=11 /product="amidase" /protein_id="NP_464375.1" /db_xref="GeneID:985321" /translation="MKKRILITIIVVCTVFSIIGGYVFFTSQKNTTSENKSAVSKNKK SIVKKEKPKQSSNNLTLGKNKEDFHLEKGFDNMQLQVERIIDRIFQSSLKNRTEIKVK PKNNPQKKQNIKPVKPIPSKPEKPEDSPSPFYDKARVMTPINNQLATLDLTVLEAKEP LIIGADVTKLQQLIATKQLSYKELAGIYLNRIKKYDQNGLNLNAITEINPTIIAEAEQ LDKENTTNKSALYGMPVLLKDNIGTKELPTSAGTVALKDWVIGKDATIVENLKENGAL ILGKTNMSEWAAGMDEDLPNGYSGKKGQSKNPYSANLDPSGSSSGSATAATSDFAAIA IGTETNGSIITPASAQSAVGYKPSQGLVNNKGIIPLSSRFDTPGPLTRTVNDAYLTAN ALTNTTSNPSLSTDALKGKRIGLLADGESNEETAVIKKIKLDLQKAGATIIEGIAVGE FEQKESYDYASLINTDFKHDLNQFLQVNHSPMSTLESIIQFNQTNPTRNMKYGQAELV KAQQSTITKQQADNLASNLIQSSQNELDSVLQKDKLDAVVTIGMGGSVMFLAPIAGNP ELTIPAGYDEESNQPISLTFITARNSDKILLNMGYAYEQQSQNRKSPNLK" misc_feature complement(887655..889502) /locus_tag="lmo0849" /note="amidase; Provisional; Region: PRK11910" /db_xref="CDD:183377" regulatory complement(889509..889514) /regulatory_class="ribosome_binding_site" regulatory 890056..890061 /regulatory_class="ribosome_binding_site" gene 890069..890215 /locus_tag="lmo0850" /db_xref="GeneID:985319" CDS 890069..890215 /locus_tag="lmo0850" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464376.1" /db_xref="GeneID:985319" /translation="MDNNQKDLNQVIRQLKEKGIVVEKTKSRKDIWKSVSSKAMPNMT LRLQ" misc_feature 890075..890176 /locus_tag="lmo0850" /note="Lmo0850 family protein; Region: lmo0850_fam; NF040845" /db_xref="CDD:468784" regulatory 890426..890431 /regulatory_class="ribosome_binding_site" gene 890439..891197 /locus_tag="lmo0851" /db_xref="GeneID:985315" CDS 890439..891197 /locus_tag="lmo0851" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0851" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464377.1" /db_xref="GeneID:985315" /translation="MKKEAVNQQSIYVHIDHVINNVATSGISFCDFLNGVGQPPENIL LIKHNIEDASYNAHTAFHYLEPGDLANISKENFNPLCWIDFEDVELLNQLTPQEVAEM LYLAHTGRHLRSPFYYKLQNNFVYLTREDGRYNKVYYRNLNHFYMLLSYVIARKTAEL VNEKGIFSFGKKKYVAEPPVELLKKMADHFKDGACIALDDVVRTRTQIEVPIGHGLTE EMTELEISSKIYYEEEVAKLVYDLKQNEWKYIEK" regulatory 891264..891269 /regulatory_class="ribosome_binding_site" gene 891277..891831 /locus_tag="lmo0852" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985313" CDS 891277..891831 /locus_tag="lmo0852" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="NP_464378.1" /db_xref="GeneID:985313" /translation="MTKKLIKEVALTLFAEKGYDGTALSEIAKAVGIKTPSLYAHFAS KEALFLEVYQDSIQMELTELGRVAEREDLVGEEKLQSIFFVATDFSSNPDEKKFFQRA VFYPPKSLFQELKEETKTYEQLTNRILRETLEKIVSEEALVRWMHVFYALLDGLSVEH GIYDETEFELRRKSAWAVLASLLK" misc_feature 891280..891741 /locus_tag="lmo0852" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" regulatory 891834..891839 /regulatory_class="ribosome_binding_site" gene 891848..892189 /locus_tag="lmo0853" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985304" CDS 891848..892189 /locus_tag="lmo0853" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="SugE protein" /protein_id="NP_464379.1" /db_xref="GeneID:985304" /translation="MAWFYLIMAGLSEIVWAFGLKESHGFTMLGWSLLTIAFLIVSFG LFSISMKSIPIGTAYAVFTGIGAAGTAIIGMIFLSEGVSFWKIVSLIVLLTGIIGLKL VDGNESEKEAK" misc_feature 891851..892162 /locus_tag="lmo0853" /note="Multidrug transporter EmrE and related cation transporters [Defense mechanisms]; Region: EmrE; COG2076" /db_xref="CDD:441679" regulatory 892176..892181 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0853" gene 892192..892512 /locus_tag="lmo0854" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985242" CDS 892192..892512 /locus_tag="lmo0854" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="SugE protein" /protein_id="NP_464380.1" /db_xref="GeneID:985242" /translation="MDWIFLLVAGLCEMVFVVMLKLSDGFKKVGYAILTIIFMSASFF LLSLALKTIPIGTGYAIWTGIGAVGSVTLGMIVFKERKSVGKLLFITMIIAGVVGLKL TSGV" misc_feature 892198..892506 /locus_tag="lmo0854" /note="Multidrug transporter EmrE and related cation transporters [Defense mechanisms]; Region: EmrE; COG2076" /db_xref="CDD:441679" regulatory 892650..892655 /regulatory_class="ribosome_binding_site" gene 892662..893774 /gene="ddl" /locus_tag="lmo0855" /db_xref="GeneID:985238" CDS 892662..893774 /gene="ddl" /locus_tag="lmo0855" /EC_number="6.3.2.4" /experiment="EXISTENCE:[PMID:19448609]" /note="D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli" /codon_start=1 /transl_table=11 /product="D-alanyl-alanine synthetase A" /protein_id="NP_464381.1" /db_xref="GeneID:985238" /translation="MKTKLILLYGGKSAEHEVSLQTAFSVINALDLEKFEAAPIYITN EGEWIQGPLLSGKLDFVEQLRFSATDTIKLATTESEKSEGEAISPAVLEADGQETVVF PLLHGPNGEDGTVQGLFEVLNIPYVGNGVLASSAAMDKIVMKKIFADAGIPQVPAVAV RLIDWKNYQEEMVAEMEEVLTYPVFVKPANLGSSVGISKATNKKELVDAMTEAFLYDR RVVVEQGVVAREIEMGVLGNDTPVCSVPGEILPEGAVATFYDYKAKYQDNNTALIIPT EVDPEILEQMKEYAIQAFLGLDASGLVRADFFLTEDNQLFLNEVNTMPGFTPYSMYPL LWQETGLPYGALIERLVDLAKERHAAKNALKYKLED" misc_feature 892662..893729 /gene="ddl" /locus_tag="lmo0855" /note="D-alanine--D-alanine ligase; Region: ddl; PRK01966" /db_xref="CDD:234993" regulatory 893788..893822 /regulatory_class="terminator" regulatory 893822..893828 /regulatory_class="ribosome_binding_site" gene 893838..895211 /gene="murF" /locus_tag="lmo0856" /db_xref="GeneID:985224" CDS 893838..895211 /gene="murF" /locus_tag="lmo0856" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diamino pimelate-D-alanyl-D-alanyl ligase" /protein_id="NP_464382.1" /db_xref="GeneID:985224" /translation="MKKTVGEVVAMLDSSIHVDAFRDVVITGVCFDTRQIKSGDLFVP FVGNVRDGHEFVGQAREMGAVATFWQKNVPNPPTDFPVILVEDTLLALQELAAKYIQQ VKPKVIAITGSNGKTTTKDIMAAIVETTYKVHYTGGNFNNHIGLPYTILTMPEDTEVA VLEMGMNHRHEIEVLSKIAKPDIAIITNIGEAHIEYLGSREEIAKAKLEITAGLNPSG ILIYPHEETLLLGNINGDFRQLTFGKSEAAEIYPLEIRAEAEGTSFITNWEPELEIFV PIIGEHNVFNTMAAMLAAREIGIEGEKIQSALKNMERSKSRLEWITTKSGARILNDAY NSSPTALKTVLKTFMHMDSSGKPKYLVLADMLELGDLSTKLHQESAEVLENDTIQKVF LYGDAMKAFGEVAESKIGQGKVHHFDTKESLETALLSEIKGNEWILVKGSYGMGLKDV VENLIIK" misc_feature 893838..895199 /gene="murF" /locus_tag="lmo0856" /note="UDP-N-acetylmuramyl pentapeptide synthase [Cell wall/membrane/envelope biogenesis]; Region: MurF; COG0770" /db_xref="CDD:440533" regulatory 895263..895268 /regulatory_class="ribosome_binding_site" gene 895278..895991 /locus_tag="lmo0857" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985170" CDS 895278..895991 /locus_tag="lmo0857" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carboxylesterase" /protein_id="NP_464383.1" /db_xref="GeneID:985170" /translation="MVACLCIHGFTGSPSEVKPLADYLREHTDWDVLAPTLPGHDHLR HLKNVTYKDWIVFVDSILSQMLKEDDEVYIIGFSMGGLLAGWLARHYPEVKKLVLLST AVNAMEWPQLVENSKQVLTEAKEVTLKNSPMFKRYQKKVTETPWTSTLQFKKMVALAK PVFEHIEIPTFIAQGSADQVVPAEKSVNFLMESIPGPKELFILEGSKHVICQDEQADK LFAAVLTFLQKDVAVLNTK" misc_feature 895278..895973 /locus_tag="lmo0857" /note="Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism]; Region: YvaK; COG1647" /db_xref="CDD:441253" regulatory complement(895990..896032) /regulatory_class="terminator" regulatory 895998..896036 /regulatory_class="terminator" gene complement(896003..897028) /locus_tag="lmo0858" /db_xref="GeneID:985100" CDS complement(896003..897028) /locus_tag="lmo0858" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="NP_464384.1" /db_xref="GeneID:985100" /translation="MKKVTMQDIADRLNITKNSVSQALGNKNGVSEQTKLAVFKMADE LGYKYKREIAREVVKEKFALLATSFALSQRSFFGEIIDNMKQSIIAHQAELIIFPVTD EEAATNQLPEQLTSENWTGIFLLSHINTDYSKKVIDLGMPVVLIDHHDPHLKADAVIS QNKDGAFMAVEFLIQNKHQKIGFLGDVTFSPSYEERLEGYKKALQYYHIPFNKKYAIT RIKEEQTTLYRTLDELDELPTAWFCVNSGLGFILNTYLQSKGYNIPKDLSIICFDNTE FTVLSNPQLTTMCTNLSFMGEKAVELMYNRIRKPDEGFVHLALATNLIARDSVGENKK TDSASES" misc_feature complement(896864..897010) /locus_tag="lmo0858" /note="Helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators; Region: HTH_LacI; cd01392" /db_xref="CDD:143331" misc_feature complement(order(896864..896869,896879..896881, 896888..896890,896927..896929,896936..896941, 896954..896956,896963..896968,896972..896986, 897008..897010)) /locus_tag="lmo0858" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143331" misc_feature complement(order(896864..896872,896876..896890)) /locus_tag="lmo0858" /note="domain linker motif [active]" /db_xref="CDD:143331" misc_feature complement(896045..896845) /locus_tag="lmo0858" /note="Type 1 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_type1; cl10011" /db_xref="CDD:471960" regulatory complement(897035..897040) /regulatory_class="ribosome_binding_site" regulatory 897258..897263 /regulatory_class="ribosome_binding_site" gene 897273..898592 /locus_tag="lmo0859" /db_xref="GeneID:985026" CDS 897273..898592 /locus_tag="lmo0859" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter substrate-binding protein" /protein_id="NP_464385.1" /db_xref="GeneID:985026" /translation="MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAP NPTQVKYWDEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRS FAAQLADSKAIVPLNDVKGLDDVVKERNMSETMDSWKFSDGNQYVLPVYSNPILFAWR LDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYD AASKGNAFVEDGKLVADDKAGTELLTFMSELQKNKLLLASKATDPFETGTSIMADNGP WTFPNWDEKFPELKYNENYAITAPLVPDSMVNEENVATYADSKGVVMYAQATDKEKEA AMDFLKFVYNDDKNDLKFLETTNLIPARDDATENETFTAFFKENPELEVYAANVPYSI PAMDDAKYNDIQQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGVLQE" misc_feature 897282..898310 /locus_tag="lmo0859" /note="ABC-type glycerol-3-phosphate transport system, periplasmic component [Carbohydrate transport and metabolism]; Region: UgpB; COG1653" /db_xref="CDD:441259" regulatory 898570..898575 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0859" gene 898589..899467 /locus_tag="lmo0860" /db_xref="GeneID:984935" CDS 898589..899467 /locus_tag="lmo0860" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_464386.1" /db_xref="GeneID:984935" /translation="MKRRNNKLGWSFTSPYLIFTAIFFLVPLVWSIWLSVTDWNMMSP EINFVGFDNFIKAFTSPAVQAAFFVTYKFLIVFVPMALIISMIVAVLVNGLPKFKGLY LVAFFLPYLSSGVVTSLIVQGLLSYNSALNVFLRGHFGWDIDWLGTPMSALVIISLMI AWKMSGYYALILISGLASINHEIYEAAAMDGSGRFRTFWKVTVPMLYPALFTVIVLAV GVSFGIFTEVYQLTGGGPNFATNTWQMEIFNQAFVNLNSGYASAISLMAATVTFASIG VIKKMLEKWGQRNGWT" misc_feature 898592..899446 /locus_tag="lmo0860" /note="ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpA; COG1175" /db_xref="CDD:440788" regulatory 899440..899445 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0860" gene 899454..900287 /locus_tag="lmo0861" /db_xref="GeneID:984876" CDS 899454..900287 /locus_tag="lmo0861" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_464387.1" /db_xref="GeneID:984876" /translation="MVGHNSKAGKIVRYILTTLLMLIMIYPFIYLVLNSFAAWDQVDK KLIPTEFTTRSWDWLFGNSVVAAPAPWIHAFINTIIVSTIATGLMLLFGLMVGYALAK VDFKGKKIVNNAILFQMFFPAIILLIPQFLMITDFGLLDTYAGMIIPTMLSLWAVFMY TNFFKAIPDTLIEAAKLDGASDLKILFRVVLPMSKSITTVIFLFLFTDRWTNLLWDML VTKSDGTVTLNVLISQMFGPYATYPGPMYAASVLLTLPLIILFLFFSKKFQEGMQFTL K" misc_feature 899469..900278 /locus_tag="lmo0861" /note="ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpE; COG0395" /db_xref="CDD:440164" regulatory 900289..900294 /regulatory_class="ribosome_binding_site" gene 900303..901835 /locus_tag="lmo0862" /db_xref="GeneID:984847" CDS 900303..901835 /locus_tag="lmo0862" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oligo-1,6-glucosidase" /protein_id="NP_464388.1" /db_xref="GeneID:984847" /translation="MEFWRRSVFYEIYMKSFQDSNGDGLGDFKGLTSRLDYLVDLGID GIWLTPFYPSPQVDNGYDVSDYCDINPDYGDMTDFRAFMKAADARGIKVIIDLVLNHS STEHTWFKESRSSKTNPKRDYYIWREKPNNWESFFGGSAWEKDELTGEYYYHSFAKEQ ADLNWANEAVRAEMEQVLAFWLNEGVAGFRLDVINNLTLVLEFPDNPVASGEMEHVYD RNQSGLEQALEDIASFCRKERDVFLVGEISSDKLPEIARYSSKKMLDVTFNFNFGSVD QLDAKSVFTTLNEMETALNEGQWPTLFFGSHDMSRFRSRLASGDIVKTQLLAFLMLTA KGVPFIYYGEEVGMPDLTFSSVKEMRDIQGTAAYYQALQTGTDEKQALEIAIEKTRDK ARGPMIFPDGKPFTLGEPWIKMATLPEEEARMMWDFYQALLAFRKENDFKEMEYTFLK LDGEVLSYQRGEFIFLLHFGEEEITYPLQGNYQLVFGEAMMVENGIRMGAHTGIALRV EE" misc_feature 900321..901616 /locus_tag="lmo0862" /note="Alpha amylase catalytic domain family; Region: AmyAc_family; cl38930" /db_xref="CDD:476817" misc_feature order(900603..900605,900870..900872,900876..900878, 901038..901040,901221..901226) /locus_tag="lmo0862" /note="active site" /db_xref="CDD:200451" misc_feature order(900876..900878,901038..901040,901224..901226) /locus_tag="lmo0862" /note="catalytic site [active]" /db_xref="CDD:200451" regulatory 901825..901830 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0862" gene 901837..902751 /locus_tag="lmo0863" /db_xref="GeneID:984720" CDS 901837..902751 /locus_tag="lmo0863" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0863" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464389.1" /db_xref="GeneID:984720" /translation="MNTIENLLQVYRENSAAFGTRITLNGAGDKDVYNITAPFHWLGQ EYIAGRVESRDSEFSEVRFFEKTETDKYQLVENTTVLALQDPFVTFVQGELIIGGVEV FPKETDPTMLDWRTNLYRATSLTNFKQILAGPIGMKDLRIKELADGRILVLTRPQGEK GGRGKIGAIVMDSLTELTIEKIEAAPLLKRNFSGEEWGGGNELHLLEDERIGVLGHIA CFDEAGNRHYYACSFQLNEDFSQIEQEKIIAERANFAPSEPKRPDLADVVFSGGLIRN PDGTATLYAGIGDSDAQKLAIPDPFKNN" misc_feature 901867..902742 /locus_tag="lmo0863" /note="Protein of unknown function (DUF1861); Region: DUF1861; pfam08950" /db_xref="CDD:401049" regulatory 902756..902761 /regulatory_class="ribosome_binding_site" gene 902773..903840 /locus_tag="lmo0864" /db_xref="GeneID:984716" CDS 902773..903840 /locus_tag="lmo0864" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0864" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464390.1" /db_xref="GeneID:984716" /translation="MNIYRYEENPLITPLDVKPIHEGFEVIGAFNAGVAEYNGEVLLL LRVAEKPVSENPEVVLAPVYNATSNELELQPFRLDDENYDFEDPRMIRSKAKLEGFSY LTSLSYIRIARSKDGHQFTLDEKPFLYPFNEYQTFGIEDARVTQIGDTYHVNFSAVSE FGVADALVTTKDFENLEYQGNIFAPENKDVLIFPEKINGKYYALHRPSLKSIGNLDIW IASSPDLRSFGDHRHLLGIRPGEYDSGRVGGGCVPIKTEEGWLILYHGATEENRYVMG AALLDLNDPTIVLKRTKTPILEPVADYEKNGFFGDVVFACGAIQEGDTLHMYYGVADT SMAGCDMKISEILHQLEVENK" misc_feature 902842..903795 /locus_tag="lmo0864" /note="Glycoside hydrolase family 130 such as Listeria innocua beta-1,2-mannobiose phosphorylase; Region: GH130_Lin0857-like; cd18612" /db_xref="CDD:350124" misc_feature order(902863..902865,902908..902910,903190..903192, 903244..903246,903334..903339,903388..903390, 903508..903510,903565..903567,903589..903591, 903697..903699,903712..903714,903769..903771) /locus_tag="lmo0864" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:350124" misc_feature order(903172..903174,903181..903183,903247..903249, 903253..903258,903313..903330,903385..903387, 903391..903393,903397..903402,903406..903411, 903415..903417,903424..903426,903433..903435, 903439..903441,903448..903471) /locus_tag="lmo0864" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:350124" regulatory 903822..903828 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0864" gene 903837..905510 /locus_tag="lmo0865" /db_xref="GeneID:984615" CDS 903837..905510 /locus_tag="lmo0865" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphomannomutase" /protein_id="NP_464391.1" /db_xref="GeneID:984615" /translation="MTWKHYLSAWQNADLSNEWRRELQRVEEEQERFDGYLTFGTGGM RGKMGIGTKRINLFTIRRVAKGLGDYVVANEGAEMGVAIAFDSRHHSGAFAQETAKVL AAQGINVYLSDSIRPTPALSFCVREKGAFAGVVITASHNPSIYNGFKVYDKNGCQITL GVAQEIAGYLEKITDIFTIPVRELPNPLVTPLGKEMDDAYLNALTAVVSRPDLLADYG NELRICYTPLHGAGKELVMRGLLENGFSETTIIAEQSEPDGDFPTVISPNPEEENSFD LAKKLAKEIQADIILATDPDADRLGVAVLNKQATYQILTGNQLGALLLNYILEAKTPV TGADTMINTIVTGDLGGKIAYDFGINHIQTLTGFKFIGEKIAEMEGTEKNFLFGYEES YGYLIAPFVRDKDAVQAALLTAEMALFYKKEGTTLLGKLTNLFEKFGYHKEYLHTITL DDSDGITKMIQVIDALRKEPIFMPEITVVEDFLTSKRTNFVTMEVTNIELPKENVLKF YLMDSSWFAIRPSGTEPKCKIYFQTSGETEEIATKAMNELRKRVLAVWD" misc_feature 903945..905486 /locus_tag="lmo0865" /note="This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and...; Region: PGM2; cd05799" /db_xref="CDD:100092" misc_feature order(903954..903956,903960..903962,903969..903971, 904251..904259,904281..904283,904716..904718, 904722..904724,904728..904733,904869..904871, 904932..904940,905004..905006,905010..905012, 905016..905018,905391..905393,905397..905405, 905418..905420) /locus_tag="lmo0865" /note="active site" /db_xref="CDD:100092" misc_feature order(903960..903962,904251..904253,904731..904733, 904869..904871,904932..904934,904938..904940, 905004..905006,905010..905012,905016..905018, 905391..905393,905397..905405,905418..905420) /locus_tag="lmo0865" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100092" misc_feature order(904251..904253,904716..904718,904722..904724, 904728..904730) /locus_tag="lmo0865" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:100092" regulatory 905517..905557 /regulatory_class="terminator" regulatory 905949..905954 /regulatory_class="ribosome_binding_site" gene 905962..907524 /locus_tag="lmo0866" /db_xref="GeneID:984613" CDS 905962..907524 /locus_tag="lmo0866" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase" /protein_id="NP_464392.1" /db_xref="GeneID:984613" /translation="MTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLEGKDLIG QAQTGTGKTAAFGLPMIHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVL AVYGGSDISRQIRSLKKNPQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMG FIDDIETILKEVPAERQTLLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQF FVKVHEKEKFDVLSRLLDVQAPELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQ AKRMSVLRKFKEGKIDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRA GKEGMAITFVQPREMGYLRIVEETTKKRMQPLQAPTWDEAFAGQLRVATEKIQEAITE ENLADYKTFANELLEKYDATDIAAAMLKMLAKEPDKTPVHITEERPLPSRGGGGYKGK NGKGGKGGGYRGGSGKGGSYRDRNNSGKGRRSGGGSGGGSGSGGGGNRDRRGGGEQRS GGNKGNYSQKSK" misc_feature 905962..907149 /locus_tag="lmo0866" /note="Superfamily II DNA and RNA helicase [Replication, recombination and repair]; Region: SrmB; COG0513" /db_xref="CDD:440279" regulatory 907554..907606 /regulatory_class="terminator" gene 907576..907832 /locus_tag="lmos33" /db_xref="GeneID:18245138" misc_RNA 907576..907832 /locus_tag="lmos33" /product="rli37" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245138" gene 907654..907830 /locus_tag="lmo0866a" /db_xref="GeneID:16695799" CDS 907654..907830 /locus_tag="lmo0866a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475633.1" /db_xref="GeneID:16695799" /translation="MKINKIIEYIVVAIIVLGWTYFIVIKEILPKNIGFISLVILSIV LYFVGKWLNGKHST" gene 907926..907973 /locus_tag="lmos34" /db_xref="GeneID:18245109" misc_RNA 907926..907973 /locus_tag="lmos34" /product="PreQ1" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245109" regulatory 907966..907971 /regulatory_class="ribosome_binding_site" /locus_tag="lmos34" gene 907979..908467 /locus_tag="lmo0867" /db_xref="GeneID:984585" CDS 907979..908467 /locus_tag="lmo0867" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0867" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464393.1" /db_xref="GeneID:984585" /translation="MKMKILTVNAIIAALYVVLGMIVAPIGFMALQFRIPEIFNHLIV FNKKYFWGIIVGVFITNLFFSGLGWIDLVFGVAQSAISLLLMIGISKYVKGIIPRMII NTILFSVTMAIIAWELVIVFDLPFLITWATTAASEFIVMGVGIPLMYLLNKRLNFRKM ID" misc_feature 907979..908464 /locus_tag="lmo0867" /note="ECF-type transporter of queuosine precursor, membrane (S) component [Nucleotide transport and metabolism, Translation, ribosomal structure and biogenesis]; Region: QueT; COG4708" /db_xref="CDD:443743" regulatory 908476..908493 /regulatory_class="terminator" gene complement(908499..909056) /locus_tag="lmo0868" /db_xref="GeneID:984573" CDS complement(908499..909056) /locus_tag="lmo0868" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0868" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464394.1" /db_xref="GeneID:984573" /translation="MNNYIKVHQPLNVDLRTQKTQTKLYTVLERFYLEGRTFESISIK DLCEQAQISRATFYRHHEEIIQIIEVQILRTMQYFSLEFDQIILTKENIQRLILRSIQ KNPLLFQAIFWSRAENIFLDVVSGEILRISLLKEISFSDSNFIPNCFARMILSLAAEI QQSNKDYTNGQLVELIQEAARFLQK" regulatory complement(909063..909068) /regulatory_class="ribosome_binding_site" regulatory 909146..909151 /regulatory_class="ribosome_binding_site" gene 909159..910157 /locus_tag="lmo0869" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984542" CDS 909159..910157 /locus_tag="lmo0869" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0869" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464395.1" /db_xref="GeneID:984542" /translation="MKIITIEEHFESEVITNEINKVTGNLVSGQVNPEMFQYMQKELP SAAEMQDTEKRLGFMDQHGIDMQVLSYGNSSPQNLDPKISVSLCKRANDELAKVIQQN PTRFSGFAVLPVGSPEDAAIELKRAVEELGFKGALVKGQFENKYFDNSFYYPIFEMAE KLDVPISFHPSFIPETITEQYFASDAWSDVVTGVFSSAGFGWHMDVGIQVVRMILSGI FDKLPNLKIITGHLGEMVPMFLERMDDTLGHWTTLEHKISDYYRTNVYITPSGLLYRN EWKFLLNELDENHLIYALDYPFVKPENAGTFLDMLDLTDEVKAKIAHKNAEKLLHL" misc_feature 909309..910154 /locus_tag="lmo0869" /note="5-carboxyvanillate decarboxylase LigW (lignin degradation), amidohydro domain [Carbohydrate transport and metabolism]; Region: LigW; COG2159" /db_xref="CDD:441762" regulatory 910159..910164 /regulatory_class="ribosome_binding_site" gene 910173..910484 /locus_tag="lmo0870" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984493" CDS 910173..910484 /locus_tag="lmo0870" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0870" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464396.1" /db_xref="GeneID:984493" /translation="MTLSKEQIKATKSEFAENLALADLTIVEVAKELNTSQVKIERIF NLKQRSLNDGWILRNYLLRKVTEVGKTPVPFTALSGDYHGYWFLDGEEIDSGILSKGN H" misc_feature 910173..910460 /locus_tag="lmo0870" /note="Uncharacterized conserved protein, DUF2316 domain [Function unknown]; Region: COG4367" /db_xref="CDD:443497" regulatory 910490..910519 /regulatory_class="terminator" gene complement(910517..910870) /locus_tag="lmo0871" /db_xref="GeneID:984472" CDS complement(910517..910870) /locus_tag="lmo0871" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464397.1" /db_xref="GeneID:984472" /translation="MTKVYNIGVEATLEVIGGKWKPVILCHLREGKKRTGELKRLIPN ITQKMLTQQLRELEKSGVIIRKVYEQIPPKVEYSLSEYGESLSEILNKLCLWGENHVD LLLTKNEDIVLLKRD" misc_feature complement(910565..910849) /locus_tag="lmo0871" /note="DNA-binding transcriptional regulator, HxlR family [Transcription]; Region: HxlR; COG1733" /db_xref="CDD:441339" regulatory complement(910877..910882) /regulatory_class="ribosome_binding_site" regulatory 910985..910990 /regulatory_class="ribosome_binding_site" gene 910998..912164 /locus_tag="lmo0872" /db_xref="GeneID:984428" CDS 910998..912164 /locus_tag="lmo0872" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="antibiotic resistance protein" /protein_id="NP_464398.1" /db_xref="GeneID:984428" /translation="MDMKKVNPNLTLLALAISAFGIGSTEFISVGLLPLISSSMGVSI STAGLTVSIYALGVMVGAPVLTTVTAKMNRKNLLLLVMLVFLIGNLVSAFAVSFGMLL TGRVVAAFAHGVFMSIASVIAADVVHPSKRASAIAVMFTGLTVATVTGVPLGTFIGQL FGWRMSFLFIVAIGVIAIIANFFLVPKNLSNGKSISFKSIGQLLVNKKIVMVLLMTAF GYGGTFVVYTYLSPMFSGMGYSTSMIVILLIVYGVMVAIGNTIGGHFANERPAKALFI MFSLQGVTLLLLQFTSGNAILGLMTIMLMGFFAFMNVSGLQLYVVQLAERYLPETVSM ASALNISAFNIGIALGAFIGGLVAEYIGLSYTPIVGFLMVFIAIILTFYMKKDK" misc_feature 911031..912143 /locus_tag="lmo0872" /note="Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; Region: MFS_NepI_like; cd17324" /db_xref="CDD:340882" misc_feature order(911061..911066,911073..911078,911085..911087, 911181..911183,911331..911336,911340..911348, 911355..911357,911415..911417,911424..911429, 911436..911438,911643..911645,911652..911657, 911664..911672,911679..911681,911760..911762, 911772..911774,911919..911924,911934..911936, 911946..911948,912003..912005,912012..912017, 912024..912029,912036..912038) /locus_tag="lmo0872" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340882" regulatory 912177..912212 /regulatory_class="terminator" regulatory 912355..912360 /regulatory_class="ribosome_binding_site" gene 912372..914390 /locus_tag="lmo0873" /db_xref="GeneID:984373" CDS 912372..914390 /locus_tag="lmo0873" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464399.1" /db_xref="GeneID:984373" /translation="MKLNQQCIQILDFLMEQEDFKNIGYISNALGCSERSVRYSLEKI DIFLHEQTLPALIRHTRKGVLLPEKNIVNPVVRKFKQQITPKKYRYSQEEVQQFLLLK LLLSEEVLPVTYFEEVLFISRSSVLNHLRAIEGELFLNNLDLSHQPRHGFLVTGNLIT KTSLFARSFLRFINIREFYQFLDSENSLSKKGELFFYNLFELEILQEVNREAHSVEEN MTRAMDEQLYLTLIAILLKQHEAKVDFQFTADFVAVDELDKALEIIIGSLKQYQYGRE DEAVIEAFVTGICEKMGEIYQVDFVHGDTDFYTQIKAHIKLMIRRVRAGVIIENPIFN EFMRDNREIFMRVKESLEALKPLLPISVSSQEISFLAIYFASEVQRNKQTVEMKPNLL IICPEGVAVSKMIAIQLKRMFEFESIQTIGLRKFKRAMMNDFDFVISTVDLPDMQDTK VLRIHSYLQKEDMELLQKHLRMKLVKSDKQIINKFSKILAIIGENTQITNLSKLEFDL LEALISDEGETPKRLIPTFEFTEEAIVMEETCPTWRQAIKLGTKRMEQLKVIEPSYHE KIIHNLKVYGPYMVIAPGVVIAHAGASDGVLMDGIGVTIIEDGIMFFDRYEEPVHVIF TLALKTKEAHLIVEQLMKLALNEEKMQKIKMASSKRDIYHYVKSAIFE" misc_feature 912399..914336 /locus_tag="lmo0873" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" regulatory 914391..914396 /regulatory_class="ribosome_binding_site" gene 914405..914734 /locus_tag="lmo0874" /db_xref="GeneID:986569" CDS 914405..914734 /locus_tag="lmo0874" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS sugar transporter subunit IIA" /protein_id="NP_464400.1" /db_xref="GeneID:986569" /translation="MDIEKISFSLISLAGDSFSKLIEALQAAKESDSELVEQLLKEAD DLMIEAHKVQTEMLIQETRGEQANFSVLLVHAQDTLMNTILASTLIREMIEMHQEIKT LRKEEEK" misc_feature 914414..914713 /locus_tag="lmo0874" /note="Phosphotransferase system cellobiose-specific component IIA [Carbohydrate transport and metabolism]; Region: CelC; COG1447" /db_xref="CDD:441056" regulatory 914721..914726 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0874" gene 914735..915070 /locus_tag="lmo0875" /db_xref="GeneID:986563" CDS 914735..915070 /locus_tag="lmo0875" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS beta-glucoside transporter subunit IIB" /protein_id="NP_464401.1" /db_xref="GeneID:986563" /translation="MEINQLHVLLVCNLGASTGVMVTKMKEIAQNSEKLTNTDVKIEA HPAGELREHIEDFDVILVGPQIKHQLKHLSEIAAEYNKPIQVIDTKDYGTVNGANILK DAIILKLNK" misc_feature 914753..915052 /locus_tag="lmo0875" /note="subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with...; Region: PTS_IIB_chitobiose_lichenan; cd05564" /db_xref="CDD:99906" misc_feature order(914768..914770,914774..914779,914783..914788, 914927..914929,915008..915010) /locus_tag="lmo0875" /note="active site" /db_xref="CDD:99906" misc_feature 914768..914788 /locus_tag="lmo0875" /note="P-loop; other site" /db_xref="CDD:99906" misc_feature 914768..914770 /locus_tag="lmo0875" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99906" regulatory 915076..915081 /regulatory_class="ribosome_binding_site" gene 915090..916415 /locus_tag="lmo0876" /db_xref="GeneID:986296" CDS 915090..916415 /locus_tag="lmo0876" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS sugar transporter subunit IIC" /protein_id="NP_464402.1" /db_xref="GeneID:986296" /translation="MSSKNKQSFMNRFIAFMEKYFEPVAARIEKQRHISSIKNGMIAL ISVLIIGSFSLIISAIGNMFPAGSVVKEFFVQNAAALNLPFQFTFGLLSIYAAITISY SHAKQMKVPVLHSVMAAVMVTLILNTKMVDGVLNTEFLDSRGLFIAIFAALISVELIG LFIRKNITIRIKGLPAGIATTFEAIIPLVVLLFSAVGLSILMQSVTSGQIIPEAFTTM LAPAINSIDTPYAVFLICFLEMLFWFIGLNGYAILIGFVLPFMTQYLGANAAAYAAGE PIPHVFAPNFWDYFMGFSGSGITGALVILALFSKSRELKAVGKVSVVPAIFTISEPVV FGLPICFNPYLFIPFVLGTPILAVGQWFVFHFGWVRPPIANVGGTPIPLAQYLATMDW RAIILIIFVLAAAVCMYYPFFKMYEKSLIKEEEVVSERQAAHDALDLDF" misc_feature 915117..916364 /locus_tag="lmo0876" /note="Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]; Region: CelB; COG1455" /db_xref="CDD:441064" regulatory 916422..916427 /regulatory_class="ribosome_binding_site" gene 916436..917164 /locus_tag="lmo0877" /db_xref="GeneID:986454" CDS 916436..917164 /locus_tag="lmo0877" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glucosamine-6-phosphate isomerase" /protein_id="NP_464403.1" /db_xref="GeneID:986454" /translation="MKLIINENEQLVAETVSRRIIELVKEKPASLICIAGGDTPLLTI EALIKANQAGEVDFSNTQFVGLDEWVGLGRETKGSCIQTLYDAFFDRLKNVSSEQICF FDGKATSLTDECARVDKFIDDRGGMDFILLGIGLNGHIGFNEPFVPVDVNCHVVELDD VTKRVMSKYFDTDLPLTHGISLGMQQILAAKEIFLVATGEKKIDIVKQVVEKEPTVAI PATLVKDSNTMLVVDKIAASGVEA" misc_feature 916463..917152 /locus_tag="lmo0877" /note="Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium. The reaction is an aldo-keto isomerization coupled with an amination or deamination. It...; Region: GlcN6P_deaminase; cd01399" /db_xref="CDD:238693" misc_feature order(916541..916552,916631..916636,916832..916837, 916850..916852,916856..916858,916937..916939, 917039..917041) /locus_tag="lmo0877" /note="active site" /db_xref="CDD:238693" misc_feature order(916871..916873,916877..916882,916904..916906, 917063..917083,917102..917110) /locus_tag="lmo0877" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:238693" misc_feature order(916874..916879,916895..916906) /locus_tag="lmo0877" /note="allosteric site [active]" /db_xref="CDD:238693" misc_feature order(916910..916912,916919..916951,916955..916963) /locus_tag="lmo0877" /note="active site lid [active]" /db_xref="CDD:238693" misc_feature order(916925..916927,917033..917035,917045..917047, 917135..917137,917144..917152) /locus_tag="lmo0877" /note="hexamer (dimer of trimers) interface [polypeptide binding]; other site" /db_xref="CDD:238693" regulatory 917150..917155 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0877" gene 917164..918117 /locus_tag="lmo0878" /db_xref="GeneID:986549" CDS 917164..918117 /locus_tag="lmo0878" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_464404.1" /db_xref="GeneID:986549" /translation="MEKIIVNGRKNGQKIEIACSNLVMGAGDFLRADNMDFAGPVLDQ YFEMGGNIFDTARHYRHSEKAIGAWMNMRGNRDSVIIQTKGGHPVREASDVPRVTPEA IHEDISVSLDTLQTDHVELFALHRDNPDVEVGSIMEAMHKEVEAGRVYAIGLSNWELS RIIEANEYAVNHGLTPLSFNSPNFSLAKVNRPRWENCVSANEEMIRWHEATNLPLFSW SSQAGGFFSGRFSEEDTSDTEMVEVYYSEANWERYSRAKQLANQKGCTPIQISLAYVL TQSFPTAAVIGPENTTELQSSVAAAGIKLTASEVDWLDLKA" misc_feature 917221..918066 /locus_tag="lmo0878" /note="AKR10A family of aldo-keto reductase (AKR); Region: AKR_AKR10A1_2; cd19082" /db_xref="CDD:381308" misc_feature order(917236..917244,917323..917325,917338..917340, 917413..917415,917536..917541,917626..917631, 917704..917706,917815..917835,917965..917967, 918016..918033,918040..918042,918049..918054) /locus_tag="lmo0878" /note="putative active site [active]" /db_xref="CDD:381308" misc_feature order(917323..917325,917338..917340,917413..917415, 917536..917538) /locus_tag="lmo0878" /note="catalytic tetrad [active]" /db_xref="CDD:381308" regulatory 918122..918127 /regulatory_class="ribosome_binding_site" gene 918135..918902 /locus_tag="lmo0879" /db_xref="GeneID:986553" CDS 918135..918902 /locus_tag="lmo0879" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0879" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464405.1" /db_xref="GeneID:986553" /translation="MNIKEKLAVQLYSVRKEMERDLEGTLRKIHEIGFHYVQLDGMRG NDSREVRCLLQKYELKVIGMHIKHDRFMNDLDGIIEEAYFFDCKTIFDKYIEEEDQTT AGYMATKAALINAAEKLHPLGFRIGLHNPEYDFNECIHGRRVMDYITDPVDGICIYAE PDTYWIRAAGHDETEYIKRYSGRAPIVHMKDFLSGFELEDMDNNLVEIGQGEVDFRAI IEWGEVNGVEYYCIEQDRSKRDMFETLEASYQYLLQL" misc_feature 918150..918899 /locus_tag="lmo0879" /note="Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism]; Region: YcjR; COG1082" /db_xref="CDD:440699" regulatory 918912..918930 /regulatory_class="terminator" gene 919020..920408 /locus_tag="lmo0880" /db_xref="GeneID:986636" CDS 919020..920408 /locus_tag="lmo0880" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="wall associated protein precursor" /protein_id="NP_464406.1" /db_xref="GeneID:986636" /translation="MKKRWLVFAIICLIITGFLSPKAEAATDYGSSFFTNVSLQNQNG EQATNFKENSKVRVAYDFVITQPVASGETMTLTIPDQLKLINYGGFPLMDSQGNTIAN ATIDQVTGTITLTFTDYVNTHTDLSGSLFYNATFNSKNIQTDQVNPIAFPVKNTTQTV TPYISKVNSGGGTGSPTIVFKQGRMDDKDLSILHWTVTLNNALTPIDNAVYTDTLGSG QNLLGSATIKYRDANKKVIATNIQPIALDADRNFELSIGALNNQSVVITYDTKITTKQ KSYTNKATLSGDNLDAVSRNATVNDYGSGGQGTGTPPAPPVKEEPPFIPAEKQPIEKT VETDFGPLEIVKDSEQNGKIKVIYKVKDGDTLPGVANKFDVSVAEIKDWNNLTSDTLQ AGQKLQLTIEKTLLSKITVPPVQKVTSTTRVDGVVKATGVLPHTGDSNPFIPFVTGLS LIALGFTFGRKS" misc_feature 919164..919457 /locus_tag="lmo0880" /note="Bacterial Ig domain; Region: Big_8; pfam17961" /db_xref="CDD:465589" misc_feature 919548..919904 /locus_tag="lmo0880" /note="Collagen binding domain; Region: Collagen_bind; pfam05737" /db_xref="CDD:283410" misc_feature 919800..920216 /locus_tag="lmo0880" /note="LysM repeat [Cell wall/membrane/envelope biogenesis]; Region: LysM; COG1388" /db_xref="CDD:440998" regulatory 920415..920455 /regulatory_class="terminator" regulatory complement(920415..920444) /regulatory_class="terminator" gene complement(920452..920928) /locus_tag="lmo0881" /db_xref="GeneID:986550" CDS complement(920452..920928) /locus_tag="lmo0881" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0881" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464407.1" /db_xref="GeneID:986550" /translation="MKKKGYVLLIIALLSLTLNWLPEIAHAQKETTATTYTTATTSEL MDMFLPYPIQNPYIETTKNSAELMFVTEEAASITTETNNQTQSIAGSTENHQFTLANL QPGNNLVTITATMADGTSESKTITINLPEEPKKDSKSFHDHSKNQQVTHRKKGHLL" regulatory complement(920937..920942) /regulatory_class="ribosome_binding_site" regulatory 921050..921055 /regulatory_class="ribosome_binding_site" gene 921062..921544 /locus_tag="lmo0882" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986548" CDS 921062..921544 /locus_tag="lmo0882" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464408.1" /db_xref="GeneID:986548" /translation="MELDNLEKKLPEKIKTVWRQTEGIAVLVFLLCSVAAAIILYYTG ASVWWSAIGFGLTVLYAAFIYLFIIPFRFARWSYQIKPDEMEIQHGIIFRSRVLIPMI RIQHVETEQGPLLRRQKLVSLSITTAAKTHKIEAVNESESDELRHHILELVKVAKEDV " misc_feature 921089..921520 /locus_tag="lmo0882" /note="Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain [Function unknown]; Region: YdbS; COG3402" /db_xref="CDD:442629" regulatory 921522..921527 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0882" gene 921537..923012 /locus_tag="lmo0883" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986544" CDS 921537..923012 /locus_tag="lmo0883" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464409.1" /db_xref="GeneID:986544" /translation="MFEERRLHPIALIKEIITNVRRNIVPIVVGLFSVFRAINSNGYL PDWAVYLIIVIVILLILTPAVLKYITYKYTLEDQGIRIKYGLIFRKNTYIPYERIQTV QKKQWFFFIPFNVCQILIETAGGNGKAEADLVAVPVGVVDELKDLRDGKKRDIQEAVP ETEETTVEVAEAPEKTVMLQTKQLILMAVTSGGVFGTLLIVLAFMQQFREVIPTDWME AQAEELWKMGIIVLIVLIVLILLVLWGISIVTTLFKYFQFKLMKYPNSLVVEKGLLER NHTTISLSRIQGITIIESPLRQMLGLVAVKVTTAGNSGDEKLTGDILLLPIMKKALAI KTLKEMLPDYLFEIEEMECAPKASLRRFLQIYLIWTIIPAAVASILFFPLGLISIILP ILAGIKAIASYRATGIFTDKHTLLVQSRPIFSKLTHIIRKERIQGLSLRQSIWMEKGG SRHLNVWLKSGSTSAEAYVRYINQDLAIKVYNWYSPSKTTN" misc_feature 921537..922994 /locus_tag="lmo0883" /note="Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain [Function unknown]; Region: YdbT; COG3428" /db_xref="CDD:442654" regulatory 923143..923148 /regulatory_class="ribosome_binding_site" gene 923161..924540 /locus_tag="lmo0884" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986422" CDS 923161..924540 /locus_tag="lmo0884" /EC_number="1.3.3.4" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX" /codon_start=1 /transl_table=11 /product="protoporphyrinogen oxidase" /protein_id="NP_464410.1" /db_xref="GeneID:986422" /translation="MKHIVIIGGGLSGLAAAYELQKTHPNYTWELVEKDEKLGGKFET VKRDGFLIEKGPDSFLARKPAGVGLVKDLGLEDKLIANATGRSYIYHQKALHPIPEGS VMGIPTDKEALLASTLVSEIGKARALQEPTMERNNQERDQALGDFFEARFGKELVKTI IEPLLSGIYAGDIYKMSLRATFPQFEQTVKKYGNLMDGLKESSMQTTGTKATIGAFRT LEGGLDALPKAIAAALPKENLHTAKQATEIVKKNNAYEISFADGDKMEADGVIIAATH DALIHLLAETTTEPFAGQPLTTLATVSLAYNEQDVPILPDGTGYLVARTAPYKTTACT WVQKKWPHMVPKNKMLLRGFVGKAGETWLEQASDEAIVSAVLRDYAEIMDLHAAPLFY EVSRMKSAMPQYLVNHQDRLKQLKKNIKTDYPGVFFAGMSYEGVGIPDCIAGAQTAAK ELVDYLEEV" misc_feature 923164..924525 /locus_tag="lmo0884" /note="protoporphyrinogen oxidase; Reviewed; Region: PRK11883" /db_xref="CDD:237009" regulatory 924530..924535 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0884" gene 924542..924898 /gene="acpS" /locus_tag="lmo0885" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986540" CDS 924542..924898 /gene="acpS" /locus_tag="lmo0885" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids" /codon_start=1 /transl_table=11 /product="4'-phosphopantetheinyl transferase" /protein_id="NP_464411.1" /db_xref="GeneID:986540" /translation="MIKGIGLDMIDLERVKQVVEKNPRFIERVLTEKEIKQFEKYEGN RKIEFLAGRFAAKEAYAKANGTGFGKHLSFTDVEILQVEDGRPHVTLPVKSGENVFVS ITHTARSAAAQVIIEI" misc_feature 924542..924892 /gene="acpS" /locus_tag="lmo0885" /note="4'-phosphopantetheinyl transferase; Provisional; Region: acpS; PRK00070" /db_xref="CDD:234610" regulatory 924901..924906 /regulatory_class="ribosome_binding_site" gene 924917..926023 /gene="dal" /locus_tag="lmo0886" /db_xref="GeneID:986294" CDS 924917..926023 /gene="dal" /locus_tag="lmo0886" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alanine racemase" /protein_id="NP_464412.1" /db_xref="GeneID:986294" /translation="MVTGWHRPTWIEIDRAAIRENIKNEQNKLPESVDLWAVVKANAY GHGIIEVARTAKEAGAKGFCVAILDEALALREAGFQDDFILVLGATRKEDANLAAKNH ISLTVFREDWLENLTLEATLRIHLKVDSGMGRLGIRTTEEARRIEATSTNDHQLQLEG IYTHFATADQLETSYFEQQLAKFQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRF GISMYGLTPSTEIKTSLPFELKPALALYTEMVHVKELAPGDSVSYGATYTATEREWVA TLPIGYADGLIRHYSGFHVLVGGELAPIIGRVCMDQTIIKLPREFQTGSKVTIIGKDH GNTITADDAAQYLDTINYEVTCLLNERIPRKYIH" misc_feature 924932..926020 /gene="dal" /locus_tag="lmo0886" /note="Alanine racemase [Cell wall/membrane/envelope biogenesis]; Region: Alr; COG0787" /db_xref="CDD:440550" regulatory 926216..926220 /regulatory_class="ribosome_binding_site" gene 926229..926507 /locus_tag="lmo0887" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986567" CDS 926229..926507 /locus_tag="lmo0887" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464413.1" /db_xref="GeneID:986567" /translation="MLEKENRMIISVELTQEMIQELDVVVEKEKMGRSEVIMEATQQF LQEKRARELRDEMERGYAEMATINFAIACECTHVEAEAEDRNISILGG" misc_feature 926250..>926399 /locus_tag="lmo0887" /note="Metal-responsive transcriptional regulator, contains CopG/Arc/MetJ DNA-binding domain [Transcription]; Region: NikR; COG0864" /db_xref="CDD:440624" regulatory 926498..926503 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0887" gene 926511..926858 /locus_tag="lmo0888" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986538" CDS 926511..926858 /locus_tag="lmo0888" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464414.1" /db_xref="GeneID:986538" /translation="MMVKRGDVYYADLSPVVGSEQGGIRPVLIIQNDIGNRFSPTVIV AAITAKIQKAKLPTHVEATRKDGFEKDSVILLEQIRTIDKQRLTDKITHLDEDLMAKV NKALEVSLGVVEF" misc_feature 926514..926843 /locus_tag="lmo0888" /note="mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module [Defense mechanisms]; Region: MazF; COG2337" /db_xref="CDD:441908" regulatory 927093..927098 /regulatory_class="ribosome_binding_site" gene 927110..927946 /gene="RsbR" /locus_tag="lmo0889" /db_xref="GeneID:986201" CDS 927110..927946 /gene="RsbR" /locus_tag="lmo0889" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="positive regulator of sigma-B activity" /protein_id="NP_464415.1" /db_xref="GeneID:986201" /translation="MYKDFANFIRTNKADLLNDWMNEMEKQSDQLINDIAKEAMYEET SKEFVDLIVSNVTENGSKFNEKLDDFAEKVVHLGWPIHFVTTGLRVFGLLVYTAMRDE DLFLKREEKPEDDAYYRFETWLSSMYNKVVTAYADTWEKTVSIQKSALQELSAPLLPI FEKISVMPLIGTIDTERAKLIIENLLIGVVKNRSEVVLIDITGVPVVDTMVAHHIIQA SEAVRLVGCQAMLVGIRPEIAQTIVNLGIELDQIITTNTMKKGMERALALTNREIVEK EG" misc_feature 927122..927529 /gene="RsbR" /locus_tag="lmo0889" /note="globin-like domain of positive regulator of sigma-B activity (RsbRA); Region: RsbR_N-like; cd19413" /db_xref="CDD:381292" misc_feature order(927287..927289,927350..927355,927362..927364, 927383..927388,927395..927397,927446..927451, 927458..927463,927470..927472,927485..927487, 927494..927499,927503..927508,927512..927517, 927524..927529) /gene="RsbR" /locus_tag="lmo0889" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:381292" misc_feature 927569..927895 /gene="RsbR" /locus_tag="lmo0889" /note="Sulphate Transporter and Anti-Sigma factor antagonist domain of the 'stressosome' complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation; Region: STAS_RsbR_RsbS_like; cd07041" /db_xref="CDD:132912" regulatory 927937..927942 /regulatory_class="ribosome_binding_site" /gene="RsbR" /locus_tag="lmo0889" gene 927952..928308 /gene="rsbS" /locus_tag="lmo0890" /db_xref="GeneID:985149" CDS 927952..928308 /gene="rsbS" /locus_tag="lmo0890" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="negative regulation of sigma-B activity" /protein_id="NP_464416.1" /db_xref="GeneID:985149" /translation="MGIPILKLGECLLISIQSELDDHTAVEFQEDLLAKIHETSARGV VIDITSIDFIDSFIAKILGDVVSMSKLMGAKVVVTGIQPAVAITLIELGITFSGVLSA MDLESGLEKLKQELGE" misc_feature 927958..928278 /gene="rsbS" /locus_tag="lmo0890" /note="Sulphate Transporter and Anti-Sigma factor antagonist domain of the 'stressosome' complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation; Region: STAS_RsbR_RsbS_like; cd07041" /db_xref="CDD:132912" regulatory 928299..928303 /regulatory_class="ribosome_binding_site" /gene="rsbS" /locus_tag="lmo0890" gene 928311..928721 /gene="rsbT" /locus_tag="lmo0891" /db_xref="GeneID:986533" CDS 928311..928721 /gene="rsbT" /locus_tag="lmo0891" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="positive regulation of sigma-B activity" /protein_id="NP_464417.1" /db_xref="GeneID:986533" /translation="MTFQSCVKIINEWDIVAARQLGRKISKEIGFGTVDQARITTAIS ELARNIFLYAGRGEICIEKVSESGKQGMIIVAKDKGPGIVDIRKVMQDGYTTSGGLGA GLPGVKRLMDSFDIESSIEGDSKGTVITTTKWVR" misc_feature 928350..928709 /gene="rsbT" /locus_tag="lmo0891" /note="Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains; Region: HATPase_RsbT-like; cd16934" /db_xref="CDD:340411" misc_feature order(928443..928445,928455..928457,928464..928466, 928536..928538,928542..928544,928548..928550, 928554..928559,928611..928622,928656..928658, 928662..928664,928686..928691,928695..928697) /gene="rsbT" /locus_tag="lmo0891" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:340411" misc_feature order(928578..928580,928620..928622) /gene="rsbT" /locus_tag="lmo0891" /note="ATP-lid; other site" /db_xref="CDD:340411" regulatory 928721..928726 /regulatory_class="ribosome_binding_site" gene 928738..929742 /gene="rsbU" /locus_tag="lmo0892" /db_xref="GeneID:986534" CDS 928738..929742 /gene="rsbU" /locus_tag="lmo0892" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="serine phosphatase" /protein_id="NP_464418.1" /db_xref="GeneID:986534" /translation="MEKAFEGKYRDILIQYLEHQDEEILYTCEKLSREAMEERVSPEE IVHLHRSVLELYGKELPDFVRLSFDVLLEIMVGYGLAYMEHLSLRTEQKELRSEIAQA EDMQKTLMKTEVPEHDELDFGVISVAARQMSGDYYSFTEEGDKQIGIALADVIGKGIP AAFSISMIKYALAGMTGDDRKPSIVLESLNQVAEENINDNMFITMFYGLYHEDTHLFE YGSAGHELGLYYQHKENSFSDLYAKGLPLGVDKNAIYRQFDKKIEVGDAVFIMSDGVT ETRTANGFIEREELTEIIAAHISLSAEKMVHAIYDQLVKMQNFELHDDFTLICIKRTK " misc_feature <928828..929736 /gene="rsbU" /locus_tag="lmo0892" /note="Phosphoserine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms, Transcription]; Region: RsbU; COG2208" /db_xref="CDD:441810" regulatory 929881..929886 /regulatory_class="ribosome_binding_site" gene 929892..930236 /gene="rsbV" /locus_tag="lmo0893" /db_xref="GeneID:986526" CDS 929892..930236 /gene="rsbV" /locus_tag="lmo0893" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="anti-anti-sigma factor (antagonist of RsbW)" /protein_id="NP_464419.1" /db_xref="GeneID:986526" /translation="MNISIEIKERDTDHIDIFVAGEIDAYTAPKVKEALEVYQVKEGI VLRIDLTEVSYMDSTGLGVFVGAFKSLRQRQSELVLFGLSDRLFRLFEITGLSDIIEI KNVEGEMNGNNA" misc_feature 929892..930197 /gene="rsbV" /locus_tag="lmo0893" /note="Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors; Region: STAS; cl00604" /db_xref="CDD:445002" misc_feature order(929955..929957,929961..929969,929985..929987, 930054..930056,930060..930068,930072..930080, 930087..930092,930156..930158,930168..930173, 930177..930179) /gene="rsbV" /locus_tag="lmo0893" /note="anti sigma factor interaction site [active]" /db_xref="CDD:132914" misc_feature 930063..930065 /gene="rsbV" /locus_tag="lmo0893" /note="regulatory phosphorylation site [posttranslational modification]; other site" /db_xref="CDD:132914" regulatory 930206..930211 /regulatory_class="ribosome_binding_site" /gene="rsbV" /locus_tag="lmo0893" gene 930220..930693 /gene="rsbW" /locus_tag="lmo0894" /db_xref="GeneID:986524" CDS 930220..930693 /gene="rsbW" /locus_tag="lmo0894" /EC_number="2.7.11.1" /experiment="EXISTENCE:[PMID:19448609]" /note="binds to sigma-B preventing the formation of an RNA polymerase holoenzyme" /codon_start=1 /transl_table=11 /product="serine-protein kinase RsbW" /protein_id="NP_464420.1" /db_xref="GeneID:986524" /translation="MATMHDKITLQLPAKPEYVSLGRLSLSGIASRAGFSYEAIEDLK IAVSEAITNSVKHAFKGEEDGEITVEYLIYEDKLEVRVSDNGTSFDLETRKQEIGPYD VGEDAEMMRIGGLGLFLIETLMDDVKLYYDEGVSVVMTKYINEKQVEENAKSIST" misc_feature 930220..930690 /gene="rsbW" /locus_tag="lmo0894" /note="serine-protein kinase RsbW; Region: rsbW_low_gc; TIGR01924" /db_xref="CDD:273879" misc_feature order(930364..930366,930376..930378,930385..930387, 930463..930465,930469..930471,930475..930477, 930481..930486,930559..930570,930604..930606, 930610..930612,930619..930624,930628..930630) /gene="rsbW" /locus_tag="lmo0894" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:340413" misc_feature order(930529..930531,930568..930570) /gene="rsbW" /locus_tag="lmo0894" /note="ATP-lid; other site" /db_xref="CDD:340413" regulatory 930656..930661 /regulatory_class="ribosome_binding_site" /gene="rsbW" /locus_tag="lmo0894" gene 930671..931450 /gene="sigB" /locus_tag="lmo0895" /db_xref="GeneID:986527" CDS 930671..931450 /gene="sigB" /locus_tag="lmo0895" /experiment="EXISTENCE:[PMID:19448609]" /note="sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor SigB" /protein_id="NP_464421.1" /db_xref="GeneID:986527" /translation="MPKVSQPDKEAKEKVYIWIAAYQENGDQDAQYNLVVHYKNLVES IARKYSQGKSFHEDLVQVGNIGLLGAIRRYDATFGKSFEAFAVPTIVGEIKRFLRDKT WSVHVPRRIKELGPKIKNAVEELTRELQSSPQISDIADFIGVTEEEVLEAMEMGKSYQ ALSVDHSIEADSDGSTITLLDVVGGTDDGFERVNQRMLLEKVLPVLDEREQKILQYTF IENRSQKETGELLDISQMHVSRIQRQAIKKLREALQNEEVE" misc_feature 930671..931441 /gene="sigB" /locus_tag="lmo0895" /note="RNA polymerase sigma factor SigB; Validated; Region: PRK08583" /db_xref="CDD:236306" regulatory 931437..931442 /regulatory_class="ribosome_binding_site" /gene="sigB" /locus_tag="lmo0895" gene 931451..932050 /gene="rsbX" /locus_tag="lmo0896" /db_xref="GeneID:986520" CDS 931451..932050 /gene="rsbX" /locus_tag="lmo0896" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="indirect negative regulation of sigma B dependant gene expression (serine phosphatase)" /protein_id="NP_464422.1" /db_xref="GeneID:986520" /translation="MNKAVESNNLFVFQRSKALQQYCGDVYYTHEDENGFLYVLSDGL GSGLEANRAAKATVDAIKEDIHADITDMLEKANQAVSGLRGAAIAIIKGDYLTKTLYY TGMGNIRFYMIGIEDKLIFPLSGSGFLSGRKQKYRLQSFKYKPDSKFLMHSDGLVLSR VRKSLESPLCVVKTGHLIERNILDIPTDDVTFMVGKFPE" misc_feature 931469..931960 /gene="rsbX" /locus_tag="lmo0896" /note="Sigma factor PP2C-like phosphatases; Region: PP2C_SIG; smart00331" /db_xref="CDD:214624" regulatory 932057..932099 /regulatory_class="terminator" regulatory 932245..932250 /regulatory_class="ribosome_binding_site" gene 932257..933882 /locus_tag="lmo0897" /db_xref="GeneID:984941" CDS 932257..933882 /locus_tag="lmo0897" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_464423.1" /db_xref="GeneID:984941" /translation="MKKVLLNSVKGYTWARFRKDLLAGIIVGIIALPLAMSFAIASGV SPEYGIYSSFVAGIIVSIFGGSKFQIAGPTGAFIPVLLGIVLTYGYQDLLVAGMMAGV LLCLMGIFKIGTLIKFIPRPVTIGFTAGIAVTIFMGQVGNFLGLTGMEKHESFVANMK EIWLHLDSWNFYSVLISCICMLVLFIFPKILPRIPAPLIGLVVTTAIAMLFFPDALPT IGSAYGNIPSTFPPFEFPDMTFANMSKLIGPAFVIAMLGGIESLLSAVVADGMTNTKH NSNRELIGQGIANIVTPMFGGIPATGAIARTATNINNGATSRVSGVIHGVFVLLTLLV LAPVAVNIPIAAMAPILMLVAWNMSERKTFQHIIKLKSGDTLVLVITFLLTVFASLTV AVEVGLLLAVVLFAKQMGSSMQIEEIEPEGAEIAPHLHEKISIFTIRGPLFFGAAQIF QQNIIKAIHVKPKYLILRMGKVPIIDATAEGYFHQIEKEFSKQGGQILITGLTDKAKE SLKGSGLYDRIGEEHFFSHTEDAIHYAENALNK" misc_feature 932287..933870 /locus_tag="lmo0897" /note="Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism]; Region: SUL1; COG0659" /db_xref="CDD:440424" regulatory 933944..933949 /regulatory_class="ribosome_binding_site" gene 933959..936136 /locus_tag="lmo0898" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986364" CDS 933959..936136 /locus_tag="lmo0898" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464424.1" /db_xref="GeneID:986364" /translation="MEQMQDKIMKLVQKSLTYKPAQINAVIKLMEEGNTVPFIARYRK EMTGSLDEVEIRDIEETFEYVTKLENRKEEIIRLIDEQGKLTDELRAAIVKAEKHQAL EDLYRPYKQKKRTKATIAKEKGLEPLAEWLMSFPSNADPLTEAANYISEEKEVESAEA ALLGAHEIIAEQISDEPSFREWIRNFTRKFGMIESRAKNAEADEKGVYEMYYEFNEMI GKVASHRILAFNRGEKEDILRVQVQVDTTKIFQYLFEKVIQNRNSATRPYVEEAILDA YKRFIGPAIEREIRGELTDKGEEQAIHIFSENLRKLLLQPPLKGKIILGVDPAFRTGC KFSVLDQTGKVLEIGVVYPHTAKARRPEAKQKIAEILSTYQVEVIAIGNGTASRETEQ FIVEVIRESNSNAYYCIVNEAGASVYSASETAREEFPDYQVEERSAVSIGRRLQDPLA ELVKIDPKSVGVGQYQHDVAQKRLNETLTFVVETAVNQVGVNVNTASASLLQYVAGLN KTVANNIRKYREENGSFASRKELKKVPRLGAKSYEQSIGFLRILEGENPLDKTAIHPE SYKAAEQIVKAAGFGLKDIGSEDLKAALQALSIPEEAEKLTIGKETMRDIIDNLIAPG RDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLS NSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTMLNPNGSVK" misc_feature 933968..936124 /locus_tag="lmo0898" /note="Transcriptional accessory protein Tex/SPT6 [Transcription]; Region: Tex; COG2183" /db_xref="CDD:441786" regulatory 936121..936126 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0898" gene 936136..936603 /locus_tag="lmo0899" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987820" CDS 936136..936603 /locus_tag="lmo0899" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464425.1" /db_xref="GeneID:987820" /translation="MNQAELQRHMEEVSLQFFQKEFRHQAVFNARLRTTGGRYLLKSH NIEMNPKYLENFGLAYFIGIMKHELCHYHLHLEKKGYQHRDQDFRELLKKVDAPRFCA TIPREITMHEYTCKSCGKSFLRQRRFNVNRYRCGSCGGKLIQTDSKKIYTENP" misc_feature 936136..936582 /locus_tag="lmo0899" /note="SprT family protein; Region: PRK04351" /db_xref="CDD:235290" regulatory 936152..936194 /regulatory_class="terminator" /locus_tag="lmo0899" gene 936656..936728 /locus_tag="lmot12" /db_xref="GeneID:3167617" tRNA 936656..936728 /locus_tag="lmot12" /product="tRNA-Asn" /db_xref="GeneID:3167617" gene 936732..936819 /locus_tag="lmot13" /db_xref="GeneID:3167609" tRNA 936732..936819 /locus_tag="lmot13" /product="tRNA-Ser" /db_xref="GeneID:3167609" gene 936986..937147 /locus_tag="lmo13a" /db_xref="GeneID:16695796" CDS 936986..937147 /locus_tag="lmo13a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475634.1" /db_xref="GeneID:16695796" /translation="MMSVGGCYEYYAIALNDENVVHGSEPEFEESLVVADSFADFLLK IVTGEMVIS" regulatory 937191..937196 /regulatory_class="ribosome_binding_site" gene 937202..937594 /locus_tag="lmo0900" /db_xref="GeneID:987809" CDS 937202..937594 /locus_tag="lmo0900" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0900" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464426.1" /db_xref="GeneID:987809" /translation="MDNKLEFTTIDEYITQAPPETKEVLQKIRETIKAAAPEATEKIS YQMPTFYLEGNLVHFAVAKNHYGFYPASSGIAAFESKLGNYKHSKGAVQFPIKEEVPY ELIKEMTLFRLAENKQKAAEKLAKKKKK" misc_feature 937220..937549 /locus_tag="lmo0900" /note="Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis) [Posttranslational modification, protein turnover, chaperones, Inorganic ion transport and metabolism]; Region: Fra; COG5646" /db_xref="CDD:444369" regulatory 937601..937636 /regulatory_class="terminator" regulatory 937727..937731 /regulatory_class="ribosome_binding_site" gene 937739..939025 /locus_tag="lmo0901" /db_xref="GeneID:986930" CDS 937739..939025 /locus_tag="lmo0901" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS cellbiose transporter subunit IIC" /protein_id="NP_464427.1" /db_xref="GeneID:986930" /translation="MNKFMELLGEKLMPLAAKLGENRYLTTLRDAFMLAFPLTMFGSI AVVLMNLPFWSDETKAVLQLYLGNAQSATMSIMTVFVVFGIGYSLSKYYKVEAIYGGA VALASFLILTPFFFNSPDGELITGALSLDRLGAKGMFIGMITGFIAAELYRFFVQRDW TIKMPAGVPPAVAKSFAALIPAILTLSIFLAINVMVQFFFHTNLHDVVYTVIQKPLVG LGSGIVPTLIALFFVQVLWFFGLHGQIIVNSVMDPIWNTLMLENLDAYKAGLPLPHII TKPFMEVFTVGMGGSGMTLAVVIALAFLMKSKQSKEIGRLALGPGIFNVNEPVLFGMP IVLNATILIPWIIAPLIVTTLNYFVMAAGIVPAPTGVAVPWTVPIVINGILATNSWLG GALQVVDFFIVLIIWYPFLKLVDRTNIARESEAAIK" misc_feature 937739..939016 /locus_tag="lmo0901" /note="Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]; Region: CelB; COG1455" /db_xref="CDD:441064" regulatory 939090..939095 /regulatory_class="ribosome_binding_site" gene 939106..939819 /locus_tag="lmo0902" /db_xref="GeneID:986980" CDS 939106..939819 /locus_tag="lmo0902" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="NP_464428.1" /db_xref="GeneID:986980" /translation="MVKYELIAADIREKINNGTYPPESILPDQVSLCKAYDCSRMTIK KAFDVLALEGLVYRQRGAGTFVMKNALANKQDASLRDYDGLTKMMGDNRISSKIIAFD IAFPDEKTQEQLLIKADQPVYKLIRLRLLDGAPYVLEHTTMPADLVPGLTREILHHSI YAYLQDSLGLVLSGAFRKINADKPSEYDQEYLACGEHDPVLEVEQVVYLKDGRPVEYS RSRHRYDTRSFIMVDHREK" misc_feature 939112..939813 /locus_tag="lmo0902" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: MngR; COG2188" /db_xref="CDD:441791" gene 940017..940088 /locus_tag="lmot14" /db_xref="GeneID:3167610" tRNA 940017..940088 /locus_tag="lmot14" /product="tRNA-Glu" /db_xref="GeneID:3167610" gene 940116..940188 /locus_tag="lmot15" /db_xref="GeneID:3167619" tRNA 940116..940188 /locus_tag="lmot15" /product="tRNA-Asp" /db_xref="GeneID:3167619" regulatory 940302..940307 /regulatory_class="ribosome_binding_site" gene 940316..940696 /locus_tag="lmo0903" /db_xref="GeneID:986912" CDS 940316..940696 /locus_tag="lmo0903" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464429.1" /db_xref="GeneID:986912" /translation="MDLVKNGKVLELVHPNGNWTLIKEEGFSPVQITVAAVAACSGYV YQTLLEKKRIDINDLSIHTDYEQDQESAVHVLTKINVTFTVDLVDKSNQAKAEKTVHL VKDACPVAKSLDPSIEINEIVVFK" misc_feature <940382..940687 /locus_tag="lmo0903" /note="Uncharacterized OsmC-related protein [General function prediction only]; Region: YhfA; COG1765" /db_xref="CDD:441371" regulatory 940710..940727 /regulatory_class="terminator" regulatory 940795..940800 /regulatory_class="ribosome_binding_site" gene 940810..941484 /locus_tag="lmo0904" /db_xref="GeneID:986917" CDS 940810..941484 /locus_tag="lmo0904" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0904" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464430.1" /db_xref="GeneID:986917" /translation="MAEKTIVEKLQLAKYKEAVILNQPDGADYFQNLANYEEKLADKQ YDLIFDFVETLEELITFVQKVIAENKLSVDGYLFFAYPKKGNKKFATYVHRDELMPAL KTDEEGYVDGSTLKFTRMVALDETYTVVGLKEATKLKAKGVKKNNPSADEYADHVPLV AEFLADKGDLQVFYNNLATGYQRVWARYIYSAKQPATQEKRRLEMVDILSQGYKTKDL YRQGKK" misc_feature 941290..941445 /locus_tag="lmo0904" /note="Bacteriocin-protection, YdeI or OmpD-Associated; Region: OmdA; pfam13376" /db_xref="CDD:433158" regulatory 941482..941516 /regulatory_class="terminator" regulatory 941600..941605 /regulatory_class="ribosome_binding_site" gene 941615..942112 /locus_tag="lmo0905" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986916" CDS 941615..942112 /locus_tag="lmo0905" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0905" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464431.1" /db_xref="GeneID:986916" /translation="MANYINKERRQIDFDPFDLRIIAVPEVVAVQFKPRSEHTLLIRI ADVGATYQPLKHESLFEAILPVHFNDINEEDDYWGLSDKEQAEMKLFNEVHRDLIYNF VDEHPDFTQIVVHCHAGVSRSSAVAMAIAEHLGDTDTYEKLQVIKRYLPNPRVLAIMR GEAYL" misc_feature <941816..942088 /locus_tag="lmo0905" /note="Predicted protein tyrosine phosphatase [General function prediction only]; Region: COG5350" /db_xref="CDD:444131" regulatory 942134..942139 /regulatory_class="ribosome_binding_site" gene 942148..943497 /locus_tag="lmo0906" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986897" CDS 942148..943497 /locus_tag="lmo0906" /EC_number="1.8.1.7" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense" /codon_start=1 /transl_table=11 /product="glutathione reductase" /protein_id="NP_464432.1" /db_xref="GeneID:986897" /translation="MEKHYDYIAIGGGSGGIASINRAAMHGAKCALIEPKFLGGTCVN VGCVPKKVMWYGAQIKEAMDLYADAYGYQVDASFNFQKLVENREAYIERIRGSYKNGL DNNNVDWIKGYAEFVDEKTLRVNGELVTADHILIATGGEPALPSIPGAEFGITSDGFF ALKELPKKVAVVGAGYIAVELAGVLQQLGSETHLFVRKHAPLRNFDPLLTDTLTEIIE QSDMTLHKHAIPQKVEKNPDGSLTLSLEDGRTETVDTLIWAIGRKPVIKGLQIEKSGV ELLESGHIAVDKFQNTNVAGIYAVGDVTGHYELTPVAIAAGRRLSERLFNNKKDAHLN YENIPTVVFSHPAIGTVGLTEPEAIEKYGKENIKVYTSSFTSMYTAITDHREPCRMKL ICEGKTERVIGLHGIGYGVDEMIQGFAVAINMGATKADFDNTVAIHPTGSEEFVTMK" misc_feature 942148..943494 /locus_tag="lmo0906" /note="glutathione reductase; Validated; Region: PRK06116" /db_xref="CDD:235701" regulatory 943511..943516 /regulatory_class="ribosome_binding_site" gene 943526..944200 /locus_tag="lmo0907" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986931" CDS 943526..944200 /locus_tag="lmo0907" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoglycerate mutase" /protein_id="NP_464433.1" /db_xref="GeneID:986931" /translation="MGKKLSLYFVRHGQTYLNKNLRMQGWADTPLTPEGIEIVKESGR GLAETEFVAAYSSDLHRTIATAGHLLKENKHAFGLTLEPLSEFRETFFGSYEGEKGDV AWNEIAHHMGYANQEELFQKADVRETMNGTKAADPTGDAEDFMTFWTRVEQGFLHVIN RHRETGGNVLIVAHGNTIRNIVHELEPSMDEAVILDNASVTVLAYENGLFKLERLNDT SHFKKA" misc_feature 943544..944173 /locus_tag="lmo0907" /note="Broad specificity phosphatase PhoE [Carbohydrate transport and metabolism]; Region: PhoE; COG0406" /db_xref="CDD:440175" regulatory 944207..944237 /regulatory_class="terminator" regulatory complement(944207..944237) /regulatory_class="terminator" gene complement(944243..945379) /locus_tag="lmo0908" /db_xref="GeneID:986924" CDS complement(944243..945379) /locus_tag="lmo0908" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464434.1" /db_xref="GeneID:986924" /translation="MKFSRFRDSKLFFWTIEILAVVAILFVLLQMKYIFSPIGIIVST LFMPILVAGFLFYLFNPLVLFLEKRKVPRLLSVIVIFIAFITLVVLAVMQLGPTLADQ VAELAKAIPGYWQDFEKWLQGLSNNSALKDIDMKQELEKLNISLPKIMSVVVDGVASS FGAIVSFVSSFVMILVTVPFIVFYMFKDGHKFVESSGKFFPAGIRSEAKQIIKEMNKT ISTYISSQAIDCMFVGLFTFIGYLIIGQPYALLFGFIAGATNIIPYLGPFIGAAPAVI VALFTSPVQALLVIVVVTIVQQIDSNLLSPYIMGKSLSIHPLTIIIILIVAGNLAGIF GMILGVPLYAVVKTIIVNVNRLIKLRRGQLAIDNNLPNPDTPKK" misc_feature complement(944330..945340) /locus_tag="lmo0908" /note="Predicted PurR-regulated permease PerM [General function prediction only]; Region: PerM; COG0628" /db_xref="CDD:440393" regulatory complement(945387..945392) /regulatory_class="ribosome_binding_site" regulatory 945507..945512 /regulatory_class="ribosome_binding_site" gene 945520..945912 /locus_tag="lmo0909" /db_xref="GeneID:986502" CDS 945520..945912 /locus_tag="lmo0909" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="NP_464435.1" /db_xref="GeneID:986502" /translation="MLLAIDLQSDEPIYTQICNQIIEGMAKRELLPGDKLPSVRSLGA DIGINFHTVNKAYQILKQEGFIQIHRQKGVVIHPDGVAKADELFFTKLQTKLKPLIAE SVVRGVTEEKWLEVSKAIFDEMHGRRVE" misc_feature 945526..945864 /locus_tag="lmo0909" /note="DNA-binding transcriptional regulator YhcF, GntR family [Transcription]; Region: YhcF; COG1725" /db_xref="CDD:441331" regulatory 945905..945910 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0909" gene 945915..947018 /locus_tag="lmo0910" /db_xref="GeneID:984497" CDS 945915..947018 /locus_tag="lmo0910" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0910" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464436.1" /db_xref="GeneID:984497" /translation="MEIIIYIFVSIAIISLQAITPFVIRKSECFGVNVGERANRNAEL TQLKKQYVGQVILWTSFVAIIGIALIQGFHSSENTQAGIFIASMFSQLIVSFIIYYRF HHTTLQWKRDKIEAGEISTNSIIMVDTSFHRRKMVISYTWFIVPLLIFIITLAITVVF YSTAPVDFPIHFDMSGTVTDTVAKSPRVVLLLPMMQLGMIALFIFINFVIARSKQTVE NENPTDSLKRNMLFRQISSKAMLIMCTIMVIDFLIMQVVTLLALPAEWMMVTMIISVV LILFGTVLLAVKVGQGGSRLKFADQPDGVNKPIRDDDSFWKAGVIYFNRNDPALFVEK RFGIGWTINTARPVAWLSFVIIIAVIILISILF" misc_feature 945915..946967 /locus_tag="lmo0910" /note="Uncharacterized membrane protein, DUF1648 family [Function unknown]; Region: COG4194" /db_xref="CDD:443348" regulatory 947087..947092 /regulatory_class="ribosome_binding_site" gene 947101..947604 /locus_tag="lmo0911" /db_xref="GeneID:986500" CDS 947101..947604 /locus_tag="lmo0911" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0911" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464437.1" /db_xref="GeneID:986500" /translation="MAIRLKRLEEWEGFTGIALVREGLKAEALHTEIKTAFKEILQLA RELDDFSKQKIFYGISVHNIEDGITHYSAIPVEQKYSNLKEPLEWIEVPAHTYFVAEH IQDTDIGESYEEIARAIQEKNYKPYITANNPVFDPLPFKLEVYTKQGSDETNIEIRIP VVKELHT" misc_feature 947119..947583 /locus_tag="lmo0911" /note="Integron-associated effector binding protein; Region: Cass2; pfam14526" /db_xref="CDD:434016" regulatory 947611..947632 /regulatory_class="terminator" regulatory 947704..947709 /regulatory_class="ribosome_binding_site" gene 947718..948530 /locus_tag="lmo0912" /db_xref="GeneID:986984" CDS 947718..948530 /locus_tag="lmo0912" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="formate transporter" /protein_id="NP_464438.1" /db_xref="GeneID:986984" /translation="MGYYSPQEVTEITIEKGTQKANSSTLTLVLLGFLGGAFISLGYL LYIRAVGTMPHEWGSFATLIGASLFPVGLVCILLGGGELITGNMMAVAIAWYDKKISF QQLLRNWAIVSVMNLVGAFFVAYFFGHFVGLTEGDFLPKTLATAGAKINDPFWVAFVS GIGCNWFVGIAVWLCYAAKDFAGKILGIWFPVMAFVAIGFQHVVANMFIIPAAIFAGY YSWADFIWNVIPVYLGNVVGGAVFVSLFYFLAYKKNAPKKVKEEIHQPIEEN" misc_feature 947724..948488 /locus_tag="lmo0912" /note="Formate/nitrite transporter FocA, FNT family [Inorganic ion transport and metabolism]; Region: FocA; COG2116" /db_xref="CDD:441719" regulatory 948540..948575 /regulatory_class="terminator" regulatory 948741..948746 /regulatory_class="ribosome_binding_site" gene 948754..950220 /locus_tag="lmo0913" /db_xref="GeneID:986938" CDS 948754..950220 /locus_tag="lmo0913" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="succinate semialdehyde dehydrogenase" /protein_id="NP_464439.1" /db_xref="GeneID:986938" /translation="MSIKETALPKVQTKLFINGKWTDGDNKETKDIVNPANGDVIAKI AQAGPSETKKAIKAAKDAFPDWAKMELADRVKLLHKIADLMEEKADTLAKIMTLEQGK PLKESKGEVLTGVENFRFAAEEARRLYGETIPAPNNHAFIVKKQPIGVVAAITPWNFP GGMVTRKLAPALATGNTIVLKPSGDTPLSALAIFEIFEEAGLPKGVANIVMGSSKEIG ETLTDSDDVRKLTFTGSTKVGQTLFKQSADTLKKISLELGGHAPFIVFDDANLDAAVN DLVAAKFRNNGQVCVSPNRIFVAKEIKEKFTKALVAKVEQLKVGNGLDDVNVGPLIRE DAIDKIDKQLKNATEKGAKVLTGGGRLTGSDYDKGNFYKPTVLDNVTRKMDIFYEETF GPVIPLITFETEDEAIEMANDSEFGLASYFYTKDLARVEKVGAALEYGMVGANEIAIS NPETPFGGVKHSGFGRENGHYGMEEYIQVKFINLKYRD" misc_feature 948847..950205 /locus_tag="lmo0913" /note="Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like; Region: ALDH_F5_SSADH_GabD; cd07103" /db_xref="CDD:143421" misc_feature order(948961..948963,948988..948990,949111..949113, 949120..949125,949129..949155,949168..949176, 949189..949191,949435..949437,949471..949473, 949483..949485,949492..949494,949663..949665, 949675..949677,949810..949812,950026..950028, 950032..950037,950047..950049,950053..950055, 950062..950064,950068..950088,950104..950106, 950113..950118,950134..950136,950149..950151, 950185..950205) /locus_tag="lmo0913" /note="tetramerization interface [polypeptide binding]; other site" /db_xref="CDD:143421" misc_feature order(949213..949227,949249..949251,949294..949296, 949300..949305,949447..949458,949465..949467, 949474..949479,949519..949527,949621..949623, 949921..949923,949927..949929,950005..950007, 950119..950121) /locus_tag="lmo0913" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:143421" misc_feature order(949225..949227,949519..949521,949612..949614, 949621..949623) /locus_tag="lmo0913" /note="catalytic residues [active]" /db_xref="CDD:143421" regulatory 950239..950261 /regulatory_class="terminator" regulatory 950350..950355 /regulatory_class="ribosome_binding_site" gene 950363..950668 /locus_tag="lmo0914" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987760" CDS 950363..950668 /locus_tag="lmo0914" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS sugar transporter subunit IIB" /protein_id="NP_464440.1" /db_xref="GeneID:987760" /translation="MKNILLICGSGASSGFMAAAIRKAAKKRGEQVTVKAASESQIDE RINEIDYLLIGPHLAYMLDDLKQKVADKDVLVSIIPQATYGTLNGEKALDLILNMEG" misc_feature 950369..950656 /locus_tag="lmo0914" /note="subunit IIB of enzyme II (EII) is the central energy-coupling domain of the phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In the multienzyme PTS complex, EII is a carbohydrate-specific permease consisting of two cytoplasmic domains...; Region: PTS_IIB; cl10014" /db_xref="CDD:447878" misc_feature 950384..950404 /locus_tag="lmo0914" /note="P-loop; other site" /db_xref="CDD:99906" misc_feature order(950384..950386,950390..950395,950399..950404) /locus_tag="lmo0914" /note="active site" /db_xref="CDD:99906" misc_feature 950384..950386 /locus_tag="lmo0914" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99906" regulatory 950658..950663 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0914" gene 950673..951941 /locus_tag="lmo0915" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987872" CDS 950673..951941 /locus_tag="lmo0915" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS sugar transporter subunit IIC" /protein_id="NP_464441.1" /db_xref="GeneID:987872" /translation="MNNKVMDFMTNKFAPKVNKVVKNPWVSAIQDAIMSALPLVFVGS LVTIVSLLKNLFPGMPDFSMISNFSFGMFGLVVAFLIPYYLMEKKGNSSQKLISGATG LVLFLMLLFPTISADGDAVFILSRFGATGMFLSITTGLFVGCVMNFAAKRSFFSEDTP IPDFVVGWFNSLLPITFILIVGWLITVQFNIDFFEVIVAVFSPLASIVQSYPGFVLSV FIPAFLYTFGISGWVMMPAIYPVYMAGLAENSQAVANGASASNIATQETVYALISIGG VGTTLSLSIMMLILSKSLQLKAIGKAVIVPSIFNINEPLFFGAPIAFNPYLMIPTWIN AFLVPSIAYFVMSMNLVSIPAQSFLLWYMPYPVTSYLATQDFRGVIACLAIIVITWLV YLPFFKAYDNSLLKQEKLDAVETEKEMVTN" misc_feature 950679..951908 /locus_tag="lmo0915" /note="Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]; Region: CelB; COG1455" /db_xref="CDD:441064" regulatory 951943..951948 /regulatory_class="ribosome_binding_site" gene 951956..952306 /locus_tag="lmo0916" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987774" CDS 951956..952306 /locus_tag="lmo0916" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS sugar transporter subunit IIA" /protein_id="NP_464442.1" /db_xref="GeneID:987774" /translation="MSEQDYVEETDSLNELSMNILIHAGNARNDLVKGLNHLEELEFN EAEEFIASAKREIVIAHSLQTDTLQLEASGNQIRYSTLFCHAQDTLMTAKSEILIGEH MLRLFKKMTELTKK" misc_feature 951992..952282 /locus_tag="lmo0916" /note="PTS_IIA, PTS system, lactose/cellobiose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_lac; cl00166" /db_xref="CDD:469637" misc_feature order(951992..951994,952154..952156,952202..952207, 952226..952228) /locus_tag="lmo0916" /note="methionine cluster [active]" /db_xref="CDD:238133" misc_feature order(952037..952039,952208..952210,952214..952222) /locus_tag="lmo0916" /note="active site" /db_xref="CDD:238133" misc_feature 952208..952210 /locus_tag="lmo0916" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:238133" misc_feature 952217..952219 /locus_tag="lmo0916" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238133" regulatory 952305..952310 /regulatory_class="ribosome_binding_site" gene 952318..953769 /locus_tag="lmo0917" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987667" CDS 952318..953769 /locus_tag="lmo0917" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="beta-glucosidase" /protein_id="NP_464443.1" /db_xref="GeneID:987667" /translation="MFENYQFPKDFLWGGAIAANQAEGAFKVDGKGISLADLHKYHKG KTNDEISEEQHKGVSLADIKASIEDKINYYPKRHGIDFYHTYPEDLELLAEMGFKTFR TSLDWTRIFPTGEETEPNEAGLKYYDQLIDKIIELGMEPIITILHYETPVEIVLNHGG WHNRKVIDLFEKYGKTVLDRYNKKVKYWIVINQINLIQFEPFNSTAIPYDAVDDYLSA TYQAVHNQFVASAKIYEYGKALNPDLMIGTMLADCTAYPFSCDPDDIVLAMKRNRMEY FFADVQFQGEYPQYALNYFEENNIHIEITEEDKAILQKNTMDYLALSYYYSQMVDSKR NDLDPASITPNPHLKANPWGWAVDPKGLYNALSQYWDRYHKPIIIAENGFGMYDKLEN GEIHDDYRIDYLSAHLKEMKRAMYGGVEIIAYCAWGPIDIVSCSSAQMEKRYGFIYVD LDNEGNGTGKRIKKDSFSWYKKVIESNGEDLEA" misc_feature 952330..953742 /locus_tag="lmo0917" /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase [Carbohydrate transport and metabolism]; Region: BglB; COG2723" /db_xref="CDD:442035" regulatory 953827..953832 /regulatory_class="ribosome_binding_site" gene 953842..955740 /locus_tag="lmo0918" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987658" CDS 953842..955740 /locus_tag="lmo0918" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcription antiterminator BglG" /protein_id="NP_464444.1" /db_xref="GeneID:987658" /translation="MDTQKEILAYLHKQENKWVTSNELAAFCECTTRTIRNNIYKINE VTPNLINSTKQGYQINLNIPFEFQSESDVTERKSKLLLELIKNSTKGVDLFELADILY ISEVTLKKDIQQLKNELKEADVKIVISKDRIKLIGKERAKRKYMISLLYEEGGYRESI KSRIQEMIEFVSIDKLQNIVKEVLAQESITTNQYSMMNIVLHYAISIVRIQQGNTLIE TQKTLIRKHSKEYEISKKIAKILSEEYQIHFSEAETKQLGLLYVGLQNEQSANANHGE LDQFVDKKIIDALKIVLANVEETYLIDLQNEQLFIKLAIHVQSLYYRSRYKAYTRNLS LLDIKTSYPVTFDIAVYISSLLQEKLAIDFNEDEISFIALHIGSFLESENRDYIRLEI GLLVDDYHDLRTNMLKKLRARFDNEATIELIENEDYEENFDIILTTNRDVALEKAGSI FIHPLLTTKDIKKITSRIQTKKKILENNIRGQQIDRYIVRSLYSNQIDPSELTPAKIR EQMISKMEKQTFVTPEFKEKVEKREQMAPTSFPSGIAIPHSIKNDALQSGVSIMTLQE PIYWNDVKVKIITLVAISKKDATEFNDFFEKFVEIVSEPINTKRLSMVESFEEFIRKL KMMMEESE" misc_feature 953860..955722 /locus_tag="lmo0918" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" regulatory 955753..955782 /regulatory_class="terminator" gene 955829..956001 /locus_tag="lmos35" /db_xref="GeneID:18245139" misc_RNA 955829..956001 /locus_tag="lmos35" /product="rli53" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245139" regulatory 956016..956021 /regulatory_class="ribosome_binding_site" gene 956031..957602 /locus_tag="lmo0919" /db_xref="GeneID:986830" CDS 956031..957602 /locus_tag="lmo0919" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="antibiotic ABC transporter ATP-binding protein" /protein_id="NP_464445.1" /db_xref="GeneID:986830" /translation="MSTIEINQLKIEVADRVLVEIPHLLVSKKARIGIIGQNGLGKTT LMEVIAGAKEATSGTVTTQGKLAYIKQLSTDTSTKSGGEKTRKATQHAMRQNPSVLLA DEPTSNLDVESVKHLERQWSDFHGALIIISHDRAFLDALCTEIWEIKNQKIHVYKGNY HAYLEQKQQQENQAELAYKEFKNKKKQLQASQTHHEIEAGRIVKPGKRLNNKEASAFK AGKGTQQKKQHSTIKALEKRIERLGNVEKPHTTKPIKIITPDNRVIKKGNTILSAKET AYEIAGRKLFETKAFSIKAGDKVALIGENASGKTTFLKEIIQENPNLLCNPQAKIAYF DQELNGLNQTKSLLENISEISVQTKQVNREVLGSMHFKESDLHKEVRMLSGGERVKLL LSMLLLSDANFLILDEPTNYLDIYAMEALETLIKQFAGTVLFVSHDRTFVNHVAEQLL VIENNEMNFHRMTFAEYEESKAPSRITEEDKLILEMRMSEIAAKLMQPNLKPTEKAIL EQDYQEIITKRQQFS" misc_feature 956046..957437 /locus_tag="lmo0919" /note="ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]; Region: Uup; COG0488" /db_xref="CDD:440254" regulatory 957581..957616 /regulatory_class="terminator" regulatory 957712..957717 /regulatory_class="ribosome_binding_site" gene 957724..958764 /locus_tag="lmo0920" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986844" CDS 957724..958764 /locus_tag="lmo0920" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464446.1" /db_xref="GeneID:986844" /translation="MFSHLPDSFLQMNTIFISILIEALPFVLIGVFIAGFIQMFISEQ FIAHVIPKNKFLAVIVGSLIGVFFPSCECGIVPIVRNLLAKGVPLHAGIAFMLTAPII NPVVLFSTYVAFGSTWEVPLLRVAGSLVVALVVGNIIAYLYKGTGLKDRFLKYEAASE KVAVPAANIALAGGPVESATTNFQVLTTEAVPAEVAHTNHAHHHHGEEHTHTKMTLSQ KIWHTVQHAVDEFFSVGKYLVFGALIAAAMQTYIKTSTLVSIGHGPILSILLMMVLAF VLSLCSEADAFIGASFRSVFSTQSIVAFLVFGPMLDIKNLMMMLGAFKAKFVLLIVTS VTIVVFLYALVI" misc_feature 957736..958761 /locus_tag="lmo0920" /note="Uncharacterized membrane protein YraQ, UPF0718 family [Function unknown]; Region: YraQ; COG0701" /db_xref="CDD:440465" regulatory 958770..958775 /regulatory_class="ribosome_binding_site" gene 958783..959622 /locus_tag="lmo0921" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986853" CDS 958783..959622 /locus_tag="lmo0921" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464447.1" /db_xref="GeneID:986853" /translation="MFRVFILFGFGFYLMQLHISGDISKYINMKYAYLSFSAMIAAFL LAIIQLIMVFRDEDIGAKTEHMGHTHDGENTILKKIMVYGLLSYALIAGFLFPVATLD STIVSAKGFHFPKNNAAGDDPYAQNQFLRPDTSGYFGETDYEKMMAKEKAEIIDQNPI KVNDSNYLMTMEILYNYPGEFTGKQIEFTGFVYNDEVTKDNNLFLFRFGIIHCVADSG VFGMLVQMPEKTNLKNDTWLTVKGTITQEYYSPFKMNIPSVQVESYKEVAKPKSVYVY RKY" misc_feature 958837..959604 /locus_tag="lmo0921" /note="TIGR03943 family protein; Region: TIGR03943" /db_xref="CDD:274870" regulatory 959696..959701 /regulatory_class="ribosome_binding_site" gene 959711..960631 /locus_tag="lmo0922" /db_xref="GeneID:986345" CDS 959711..960631 /locus_tag="lmo0922" /EC_number="2.7.1.33" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis" /codon_start=1 /transl_table=11 /product="pantothenate kinase" /protein_id="NP_464448.1" /db_xref="GeneID:986345" /translation="MNDYNHYFHFPREEWRKLEVSKDQILTAEELEEIRGLNDRISLQ DISEIYLPLIKLIAIQYHEAIFIHGEKMEYLKKKESRAPFIIALAGSVAVGKSTTARV FKLMLDRWFSKTRQVELVTTDGFLYPNKVLEERGIMDKKGFPESYDRDRFAKFLTDLK ANKEDVEIPLYSHFTYDVLDETRVIHNPDIVIIEGINVLQADQHESLFPSDFFDFSVY MDANEADIKKWYLERFFMLRETAFQDESSYFHPYTKISKQEAETFALGVWDTINGVNL KENIEKTKYRADLVLQKGTDHLISDIYLRK" misc_feature 959711..960628 /locus_tag="lmo0922" /note="Panthothenate kinase [Coenzyme transport and metabolism]; Region: CoaA; COG1072" /db_xref="CDD:440690" regulatory 960632..960669 /regulatory_class="terminator" regulatory 960735..960740 /regulatory_class="ribosome_binding_site" gene 960748..961221 /locus_tag="lmo0923" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986349" CDS 960748..961221 /locus_tag="lmo0923" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_464449.1" /db_xref="GeneID:986349" /translation="MSEIAIKVSNLDVKIGKKQILTDMTLEIEKGEIFGLIGPSGAGK TTLVKTIIGMEKATIGTTEVLGKVMPNLPVISKIGYMAQSDALYTDLTAKENLDFFAS LYSIKGAAKKDRMNYAATLVNLQQDLTKKVNNYSGGMKRRLSLAISVLADPDVLI" misc_feature 960763..>961218 /locus_tag="lmo0923" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" gene 961203..961469 /locus_tag="lmo0924" /experiment="EXISTENCE:[PMID:19448609]" /pseudo /db_xref="GeneID:985961" misc_feature 961203..961469 /locus_tag="lmo0924" /note="ABC transporter, ATP-binding protein (C-terminal part)" /pseudo regulatory 961454..961459 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0924" /pseudo gene 961469..962584 /locus_tag="lmo0925" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986858" CDS 961469..962584 /locus_tag="lmo0925" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464450.1" /db_xref="GeneID:986858" /translation="MRILAIVKRIINQFRRDKRTLALMFLAPLLLITLLTYLFEGDTV KPVVGVSGLSDSMVKELKANDLTIKTYSENTDVTAKIKDANLDAFFKQNGEKLEVTYE NSEPSLSKEIGLKLQKALMTEQQAQAKNQAKATGEALAKAGIDPNSIPTLTASPEKLT LSTDYVYGDKDTSFFDTISPIFIGFFVFFFVFLIAGISFLRERTTGTLERLMATPIKR IELELGYLIGFGIFALLQSILVAVFSIQVLGMMQNGSLFYVLLITLTLGMVSLALGIL LSTFANNEFQIVQFIPIVIVPQVLFCGIFPLDGMADWLVWIAHIMPLYYGANALTSIM VKGEGFASFATDFYILLGFVLVFVILNIFALKKYRKV" misc_feature 961469..962578 /locus_tag="lmo0925" /note="ABC-type Na+ efflux pump, permease component NatB [Energy production and conversion, Inorganic ion transport and metabolism]; Region: NatB; COG1668" /db_xref="CDD:441274" misc_feature 962045..962578 /locus_tag="lmo0925" /note="ABC-type multidrug transport system, permease component [Defense mechanisms]; Region: YadH; COG0842" /db_xref="CDD:440604" regulatory 962592..962597 /regulatory_class="ribosome_binding_site" gene 962607..963263 /locus_tag="lmo0926" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984510" CDS 962607..963263 /locus_tag="lmo0926" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="NP_464451.1" /db_xref="GeneID:984510" /translation="MDAEGDIIRQMLDLTEKETKMSEKQRRIVAASIELFAEKGYAGT STNEIAKKAGVAEGTIFRHYKTKKDLLMAITMPTLIGGVIPFLAQSFVKEVFESEYPD FQSFIREIIVNRFDFAKENGKVIKIYFMELFYHDELRIQFSEIFMTHVKGQFDQMIDY YKERGEIVDMPNSTIMRALITNIVGFMLTRFVVMPDVEWDDAKEIDDTVAYIMRGLGK " misc_feature 962658..963161 /locus_tag="lmo0926" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" regulatory complement(963257..963288) /regulatory_class="terminator" regulatory 963268..963299 /regulatory_class="terminator" gene complement(963294..965255) /locus_tag="lmo0927" /db_xref="GeneID:986782" CDS complement(963294..965255) /locus_tag="lmo0927" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464452.1" /db_xref="GeneID:986782" /translation="MKDWKIKIQTFLSKNYGFFVLAVILYWLKTYIAYQLEFKLGIEN LMQQILLFINPLSGAIFFMGLALFAKGRRSFIWIIVIDFLMSFILYANIVYYRFFSDF ITLPNLNAKQMQNMGDMGSSITALLSWHDIIYFADIIILIALLAFRFVKPNKTARIRA RKVVGVLTLGIAMFFGNLGLAEIDRPQLLTRTFDRNYIVKYLGMTNYQIYDAVKSTES STQRALADSSDVTEVLNYTKSKYAAPNPEYFGKAKGKNVIYIHLESFQQFLVNYKLNG EEVTPFINSFFKDQNTLSFTNFFHQTGQGKTADSEMLLENSLYGLPQGSAFTTKGQNT YESASAILGQQGYTSAVFHGNYKSFWNRDEIYKQFGYDNFFDASYYDMNEADVSNYGL KDKPFFKESEEYLSSLQQPFYTKFITLTNHFPYPIDEKDASIAPATTGDSSVDTYFQT ARYLDESVKSFVDYLKKSGLYDNSVIIMYGDHYGISDNHEEAMTKILGKDYNTFENAQ AQRVPLMIHVPGVQGGVQEQYGGQVDLLPTLLHLLGVDNKEYLQFGTDLLSKDHKQLV PFRNGDYITPTYSMIGGNMYNQQTGEPIATETKEMKETKEKVAKELELSDSVLQGDLL RFYAPDGFKKVDPSKYNYNKKKSTDSSDK" misc_feature complement(963381..965204) /locus_tag="lmo0927" /note="Phosphoglycerol transferase MdoB/OpgB, AlkP superfamily [Cell wall/membrane/envelope biogenesis]; Region: MdoB; COG1368" /db_xref="CDD:440979" regulatory complement(965262..965267) /regulatory_class="ribosome_binding_site" regulatory 965501..965506 /regulatory_class="ribosome_binding_site" gene 965513..966136 /locus_tag="lmo0928" /db_xref="GeneID:985312" CDS 965513..966136 /locus_tag="lmo0928" /experiment="EXISTENCE:[PMID:19448609]" /note="responsible for recognizing base lesions in the genome and initiating base excision DNA repair" /codon_start=1 /transl_table=11 /product="3-methyladenine DNA glycosylase" /protein_id="NP_464453.1" /db_xref="GeneID:985312" /translation="MEAMITKEFFESKTTIELARDILGMRLVHQTNEGLLSGLIVETE AYLGATDMAAHSFQNLRTKRTEVMFSSPGTIYMYQMHRQVLLNFITMPKGIPEAILIR AIEPDEQAKQQMTQNRHGKTGYELTNGPGKLTQALGLSMQDYGKTLFDSNIWLEEAKL PHLIEATNRIGVPNKGIATHYPLRFTVKGSPYISGQRKNSIRTGIWK" misc_feature 965540..966094 /locus_tag="lmo0928" /note="Alkyladenine DNA glycosylase catalyzes the first step in base excision repair; Region: AAG; cd00540" /db_xref="CDD:187726" misc_feature order(965642..965644,965648..965650,965675..965677, 965738..965740,965753..965755,965771..965773, 965810..965812,965816..965818,966020..966022) /locus_tag="lmo0928" /note="active site" /db_xref="CDD:187726" misc_feature order(965648..965650,965669..965671,965675..965677, 965693..965695,965699..965701,965705..965707, 965744..965746,965753..965755,965759..965761, 965771..965773,965810..965812,965816..965818, 965852..965854,965897..965908,965933..965935, 966020..966025) /locus_tag="lmo0928" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:187726" regulatory 966233..966238 /regulatory_class="ribosome_binding_site" gene 966245..966913 /locus_tag="lmo0929" /db_xref="GeneID:986837" CDS 966245..966913 /locus_tag="lmo0929" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sortase" /protein_id="NP_464454.1" /db_xref="GeneID:986837" /translation="MLKKTIAIIILIIGLLLIFSPFIKNGIVKYMSGHETIEQYKASD IKKNNEKDATFDFESVQLPSMTSVIKGAANYDKDAVVGSIAVPSVDVNLLVFKGTNTA NLLAGATTMRSDQVMGKGNYPLAGHHMRDESMLFGPIMKVKKGDKIYLTDLENLYEYT VTETKTIDETEVSVIDNTKDARITLITCDKPTETTKRFVAVGELEKTEKLTKELENKY FPSK" misc_feature 966482..966853 /locus_tag="lmo0929" /note="Sortase domain found in class A sortases; Region: Sortase_A; cd06165" /db_xref="CDD:320680" misc_feature order(966539..966541,966575..966580,966611..966613, 966617..966619,966767..966769,966776..966778, 966794..966796,966800..966802,966824..966826, 966833..966835) /locus_tag="lmo0929" /note="active site" /db_xref="CDD:320680" misc_feature order(966623..966625,966794..966796,966800..966802, 966806..966808,966824..966826,966833..966835, 966839..966841) /locus_tag="lmo0929" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:320680" misc_feature order(966623..966625,966806..966808,966833..966835) /locus_tag="lmo0929" /note="catalytic site [active]" /db_xref="CDD:320680" regulatory 966919..966954 /regulatory_class="terminator" regulatory 967016..967021 /regulatory_class="ribosome_binding_site" gene 967029..967760 /locus_tag="lmo0930" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986560" CDS 967029..967760 /locus_tag="lmo0930" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464455.1" /db_xref="GeneID:986560" /translation="MKLTVFGHWGGYPVANEGTSSYLLEEAGFKLLIDVGASAVSIMQ NYIDPDDIDAAIISHYHPDHVADVGILQHIRLLSQKKEKPPVLPIYGHKEDERGYSYL EMANVTKVIEYKADDTLEIGPFKVTFLKTIHPVPCYAMRIEAAGKVFVYTADSAYQDS FIPFAESADLLVTDTNFFHDLAGKTKVHMASTEVAKIAKEANVKSLLLSHLPEVGDLE VLKQEAAAIYKGEIALASKGFTKTF" misc_feature 967032..967553 /locus_tag="lmo0930" /note="uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain; Region: RNaseZ_short-form-like_MBL-fold; cd07716" /db_xref="CDD:293802" misc_feature order(967128..967130,967200..967205,967209..967211, 967215..967220,967425..967430,967488..967490, 967548..967550) /locus_tag="lmo0930" /note="putative active site [active]" /db_xref="CDD:293802" regulatory 967771..967776 /regulatory_class="ribosome_binding_site" gene 967784..968779 /locus_tag="lmo0931" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986568" CDS 967784..968779 /locus_tag="lmo0931" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="lipoate protein ligase A" /protein_id="NP_464456.1" /db_xref="GeneID:986568" /translation="MYFIDNNNEKDPRINLAVEEFILTELNLDEPVLLFYINKPSIII GRNQNTVEEIDTEYVEKNDVIVVRRLSGGGAVYHDEGNLNFSFITEDDGESFHNFAKF TQPIVEALKRLGVNAELKGRNDLLIDGFKVSGNAQFATKGKMFSHGTLMYDLNLDNVA ASLKPRKDKIESKGIKSVRSRVANISDFMDQEMTTEEFRDLLLLYIFGVEKVEDVKEY KLTAADWEKIHEISAKRYGNWDWNYGKSPKFDLTRTKRFPVGAVDVRLNVQKGVITDI KIFGDFFGVKNVADIEEKLVNTTYKREVLAEALVDIDVKEYFGNITKDEFLDLLY" misc_feature 967790..968758 /locus_tag="lmo0931" /note="biotin-lipoate ligase family; Region: BPL_LplA_LipB; cl14057" /db_xref="CDD:449326" misc_feature order(967889..967891,967988..967990,968003..968017, 968027..968029,968033..968035,968147..968149, 968174..968188,968222..968230,968234..968236) /locus_tag="lmo0931" /note="active site" /db_xref="CDD:319742" regulatory complement(968774..968813) /regulatory_class="terminator" regulatory 968785..968813 /regulatory_class="terminator" gene complement(968819..969424) /locus_tag="lmo0932" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987846" CDS complement(968819..969424) /locus_tag="lmo0932" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464457.1" /db_xref="GeneID:987846" /translation="MTFWQDMMNFFSYDNLMYWLSEYRNLGPLLAFLLPFIEAFLPFL PFIVFVVVNVNAYGLLIGFLISVIAAIAGSLCVFLLARKFGQTRFLRFISGHKQIKRV MEWIDRHGFSPIFILLVMPFTPSSAVNIVAGLSKIKVYQFILALVGGKLIKVFAISYI GYDFVDLIHQPLKLAILAVSVVILWFVGKRLEHWMSGKNLK" misc_feature complement(968831..969397) /locus_tag="lmo0932" /note="Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family [Function unknown]; Region: TVP38; COG0398" /db_xref="CDD:440167" regulatory complement(969432..969437) /regulatory_class="ribosome_binding_site" regulatory complement(969507..969544) /regulatory_class="terminator" gene complement(969549..970496) /locus_tag="lmo0933" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984547" CDS complement(969549..970496) /locus_tag="lmo0933" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar transferase" /protein_id="NP_464458.1" /db_xref="GeneID:984547" /translation="MEKSIEYSCIVPVFNEEEVLLKTYKRLTEVMQTLDGPYEIIFVN DGSRDLTKSMLQKLSAEDSCVKAIHFSRNFGHQIAITAGANYAHGKAVIVIDADLQDP PELIIEMVEKWKEGYQVVYAQRLKRKGETFFKKQSASLFYRILTKLTDINIPVDTGDF RLMDAQVCRELAGLHEKNPFVRGQVSWLGFKQTALHYERDERAAGETKYPLKKMIKLS IDGITSFSYRPLKLASYLGVLTAFIGFIYLIIVLFQRFFTDTTLTGWTSIIILQLVFG GTILFILGLIGEYIGRIYDEVKDRPLYIIEEENGFSDQK" misc_feature complement(969927..970472) /locus_tag="lmo0933" /note="Bacterial DPM1_like enzymes are related to eukaryotic DPM1; Region: DPM1_like_bac; cd04187" /db_xref="CDD:133030" misc_feature complement(order(970203..970205,970455..970457, 970461..970463)) /locus_tag="lmo0933" /note="Ligand binding site [active]" /db_xref="CDD:133030" misc_feature complement(order(970203..970208,970362..970364)) /locus_tag="lmo0933" /note="Putative Catalytic site [active]" /db_xref="CDD:133030" misc_feature complement(970203..970211) /locus_tag="lmo0933" /note="DXD motif [active]" /db_xref="CDD:133030" regulatory complement(970505..970510) /regulatory_class="ribosome_binding_site" gene 970867..970937 /locus_tag="lmot16" /db_xref="GeneID:3167608" tRNA 970867..970937 /locus_tag="lmot16" /product="tRNA-Gly" /db_xref="GeneID:3167608" regulatory 971022..971027 /regulatory_class="ribosome_binding_site" gene 971037..972176 /locus_tag="lmo0934" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986642" CDS 971037..972176 /locus_tag="lmo0934" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464459.1" /db_xref="GeneID:986642" /translation="MVVKQKADYAALKEELIAYAYEIGIQKIGFTTADPFLFLKERLL EAEALDLFTGFEHPVIEERVYPELIFKEPQSIIAIALAYPSKLKEAPVSKKGARRGVF ARASWGIDYHTVLREKLALLETFLIERLPDVRMKSMVDTGELSDVAVAERAGIGWRGK NTLLITPEYGSWVYLGEMITNIPFEPDTPASDLCGSCNQCVKACPTGSLLGEGKMNPK ICLSYLTQTKDFLDEKYREVLHNRLYGCDTCQVVCPYNRGHDFHFHEEMEPDPELVRP ELKPLLHISNRAFKEQFGDMAGSWRGKKPIQRNAIIILARYKDKTAVPDLIDCLQNDP RPVIRGTAGWALRKIGGRDAEEAVERALQTEQDVQVLQELTAIPN" misc_feature 971082..972083 /locus_tag="lmo0934" /note="epoxyqueuosine reductase; Region: TIGR00276" /db_xref="CDD:272993" regulatory 972185..972191 /regulatory_class="ribosome_binding_site" gene 972197..972706 /locus_tag="lmo0935" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986554" CDS 972197..972706 /locus_tag="lmo0935" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="rRNA methylase" /protein_id="NP_464460.1" /db_xref="GeneID:986554" /translation="MPNHIVLYQPEIPANTGNISRTCAGTDTYLHLIRPLGFSTDDKM LKRAGLDYWDNVKLSYYDSLDEFFEKNEGGEFYYITKFGRHVYSDIDYSDTNKDYFFV FGKETTGLPDALLQENEENCLRIPMTDHIRSLNLSNTAAILAYEALRQQNFGALLQEP NYDRKIFQD" misc_feature 972200..972664 /locus_tag="lmo0935" /note="tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]; Region: TrmL; COG0219" /db_xref="CDD:439989" regulatory 972706..972711 /regulatory_class="ribosome_binding_site" gene 972719..973459 /locus_tag="lmo0936" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986658" CDS 972719..973459 /locus_tag="lmo0936" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="nitroflavin reductase" /protein_id="NP_464461.1" /db_xref="GeneID:986658" /translation="MNQAIDAILGHYSVRKFEDKDLTEEALTLLIKSAQAASTSSFVQ AYSIIGITDKDIREQISAIAGNQPYTVQTGQLFIFVADLARHHAILEEHQVDTAALET SEKWLVSVIDAALAAQNMAIAAESLGLGICFIGGIRNDVEQIAEILDLPPYTMPLFGL TIGHPVANKEKAKPRLPQDLVYHENSYKKMNPETLAEYDKQIKTYYNERTAGKRVEGW SEQIARGLGRPSRLDLKAFLEKQHLNQK" misc_feature 972731..973411 /locus_tag="lmo0936" /note="nitroreductase similar to Escherichia coli NfsA; Region: NfsA-like; cd02146" /db_xref="CDD:380322" misc_feature order(972731..972733,972737..972745,972749..972751, 972803..972805,972809..972817,972821..972832, 972839..972850,972854..972877,972884..972886, 972962..972964,973034..973042,973046..973051, 973058..973063,973070..973075,973082..973084, 973094..973099,973115..973117,973130..973132, 973160..973165,973169..973171,973190..973192, 973235..973246,973250..973252,973256..973267, 973310..973312,973370..973375,973382..973387, 973394..973411) /locus_tag="lmo0936" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:380322" misc_feature order(972749..972757,972761..972763,972830..972838, 972842..972844,972917..972919,972923..972925, 973049..973054,973061..973063,973112..973126, 973235..973237,973241..973243) /locus_tag="lmo0936" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:380322" misc_feature order(972761..972763,972842..972844,973130..973135, 973229..973231,973235..973237,973331..973336, 973343..973345) /locus_tag="lmo0936" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:380322" regulatory complement(973454..973497) /regulatory_class="terminator" regulatory 973465..973497 /regulatory_class="terminator" gene complement(973509..973670) /locus_tag="lmo0937" /db_xref="GeneID:987860" CDS complement(973509..973670) /locus_tag="lmo0937" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0937" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464462.1" /db_xref="GeneID:987860" /translation="MLGIIWGIIVVLLAVWLLGIIFHIAGGLINILLVIVLILVIWNL IQMARNKRK" regulatory complement(973680..973685) /regulatory_class="ribosome_binding_site" gene complement(973758..974216) /locus_tag="lmo0938" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987839" CDS complement(973758..974216) /locus_tag="lmo0938" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="protein-tyrosine-phosphatase" /protein_id="NP_464463.1" /db_xref="GeneID:987839" /translation="MVKVVFVCLGNICRSPMAEGLFRKEVANAGLTDEIKIDSAATGT WNLGKPPHRGTQEVLKKHGVDYQAMRARKISDADFKEADFIIGMDQQNLADLNALNNN PDVIIRSLMSFVSGQEDKDIPDPYYTGDFDETERMVTEGVKALLAYITKK" misc_feature complement(973776..974213) /locus_tag="lmo0938" /note="Low molecular weight protein tyrosine phosphatase; Region: LMWPTP; cd16343" /db_xref="CDD:319971" misc_feature complement(order(973839..973841,973845..973847, 974079..974081,974172..974195)) /locus_tag="lmo0938" /note="active site" /db_xref="CDD:319971" regulatory complement(974224..974229) /regulatory_class="ribosome_binding_site" gene complement(974229..974975) /locus_tag="lmo0939" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985869" CDS complement(974229..974975) /locus_tag="lmo0939" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0939" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464464.1" /db_xref="GeneID:985869" /translation="MTIWVENENKGATEQTIHEKETEIGLILPTDYKQLLLKQNGGLI RKNHFPTSEPTSYGLDFGEIYYLGSLDELLTDIPEQKDVELAGKQVYFHRDESRYLGF SYMDNTSEPSIIYVDFETLQTLVVAENLAAFLEKLYFSPFPIDLAEHFPIKKLNQILA ASNVQKTKQLLELLEDYPDKKWYLETLLGLLEKQEIPYNLVVCSLFENQLLYFRRKLV PELVEQIFVRLKACDGINKVTVAELYKEWN" misc_feature complement(974574..974936) /locus_tag="lmo0939" /note="SMI1 / KNR4 family (SUKH-1); Region: SMI1_KNR4; cl01747" /db_xref="CDD:445532" regulatory complement(974984..974989) /regulatory_class="ribosome_binding_site" regulatory complement(975020..975063) /regulatory_class="terminator" gene complement(975071..976033) /locus_tag="lmo0940" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987854" CDS complement(975071..976033) /locus_tag="lmo0940" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0940" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464465.1" /db_xref="GeneID:987854" /translation="MDYLNALEEAWGMDDTSEKVKLLEQAIASADMYNDVESAVEARE LLIETCLTAGFPKKQLKAFSWLVKKWEDDDSSVDTFDLFWNYKWISEQIATFDEIPKT QINRLLEDMKLKFEQQNYSLRPYYKVCTLDAMWMGEVEKAKQFFVKWNNTEADHLNDC RACETCAQASYYYFIKDYEKAKETATPIINGKLACAEVPHYTYGDMALVYLELGDAEM AQECFDKGYPLVEKQIALIQPLSYLLKYLVKTNQTEKAREVLDVHKEIVLQAESGMDR LLFLQAAYSLFDREKEADLVEMTETLTAKFDARNENSYYQDLLK" misc_feature complement(975251..>975535) /locus_tag="lmo0940" /note="Uncharacterized conserved protein ECs_4300, contains TPR-like domain [Function unknown]; Region: COG4700" /db_xref="CDD:443735" regulatory complement(976040..976045) /regulatory_class="ribosome_binding_site" gene complement(976065..977039) /locus_tag="lmo0941" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986402" CDS complement(976065..977039) /locus_tag="lmo0941" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0941" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464466.1" /db_xref="GeneID:986402" /translation="MDYLNDTQTVWGMEDTPEKIKVLERIITGADAHNDVESGIEARD MLIETCLTVGFPKKQLQAFSWLISKWEDEDNDVYIDSEDLLWKYKWISEHVPTFDEVS KAQIDGLLNDMKVKFEQENYSLRPYYKVCTLAAMRMGDVEKAKELYNKWSTTKADYLN DCPACERNDQVNYYCFVQDYEKAKEKAKPIIDGKQRCAEVPHLTYGNMALAYLDLGDA KMAQECFDKGYPLVEKQISLIPPLGQLLRYLVSTNQTEKAREVLDTNLEIVLQAEAGL DRLIFLQAAYPLFDREKEADLVEMTEALTAKFDARNENNYYQNRLEAY" misc_feature complement(976071..976643) /locus_tag="lmo0941" /note="Tetratricopeptide (TPR) repeat [General function prediction only]; Region: TPR; COG0457" /db_xref="CDD:440225" regulatory complement(977047..977052) /regulatory_class="ribosome_binding_site" gene complement(977051..978856) /locus_tag="lmo0942" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986476" CDS complement(977051..978856) /locus_tag="lmo0942" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="heat shock protein 90" /protein_id="NP_464467.1" /db_xref="GeneID:986476" /translation="MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDAIRA RKKIDSTLEGKIHASLTGDNNEKTLIIEDNGIGLTEDEVHAFLATIANSSKGEKNFDG ESSNDFIGRFGIGLLSCFIVSDEIVMISTSQKDGGTTEWRGKADGTYSVRKIETDTRE PGTQVYLRLRAGLEDHPECEDVEYLINTLKKYGASLESNIIVEMNGLEEEINSWTKQF SDKETLSTLSREQIIQYGEYILGTHFQDYFLIENESGRTFGIAYMIPHAVQMNAIRKN TVFLNKMFVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVASELGVA LKKGIETLPEEALMKLLATHYLGFKALASEDAPFLKLIYPYLPVRTLNGEEKLGDIIA KNDVIYYTYSVDDFRQIKDIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIQPE EMTDKLRPMTADEKQAYQPILTEMNSMMAEFDTDVLIKHFEPKDLPIIFIHSTATQEL RELERAVEETTSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSEKTVKELSVI VNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML" misc_feature complement(977054..978847) /locus_tag="lmo0942" /note="HSP90 family protein; Provisional; Region: PRK14083" /db_xref="CDD:237603" regulatory complement(978865..978870) /regulatory_class="ribosome_binding_site" regulatory 979044..979049 /regulatory_class="ribosome_binding_site" gene 979059..979529 /gene="fri" /locus_tag="lmo0943" /db_xref="GeneID:986847" CDS 979059..979529 /gene="fri" /locus_tag="lmo0943" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="non-heme iron-binding ferritin" /protein_id="NP_464468.1" /db_xref="GeneID:986847" /translation="MKTINSVDTKEFLNHQVANLNVFTVKIHQIHWYMRGHNFFTLHE KMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKPKTMDQLMEDL VGTLELLRDEYQQGIELTDKEGDNVTNDMLIAFKASIDKHIWMFKAFLGKAPLE" misc_feature 979089..979508 /gene="fri" /locus_tag="lmo0943" /note="DPS protein, ferritin-like diiron-binding domain; Region: DPS; cd01043" /db_xref="CDD:153102" misc_feature order(979128..979133,979143..979145,979149..979154, 979185..979187,979218..979220,979230..979232, 979239..979244) /gene="fri" /locus_tag="lmo0943" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:153102" misc_feature order(979149..979151,979185..979187,979197..979199, 979230..979232,979242..979244) /gene="fri" /locus_tag="lmo0943" /note="DPS ferroxidase diiron center [ion binding]; other site" /db_xref="CDD:153102" misc_feature order(979434..979436,979455..979460) /gene="fri" /locus_tag="lmo0943" /note="ion pore [active]" /db_xref="CDD:153102" regulatory 979543..979580 /regulatory_class="terminator" regulatory 979746..979751 /regulatory_class="ribosome_binding_site" gene 979762..980064 /locus_tag="lmo0944" /db_xref="GeneID:986825" CDS 979762..980064 /locus_tag="lmo0944" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464469.1" /db_xref="GeneID:986825" /translation="MNIEVTDQANKWFHDEFDVANGNGIRLFAKYGGSNSSLHPGFSI GLTAEKPQEAAVAEKKEDLIFFIEDHDYWYFKDHDWKIDYEPKTEEVLFSFKEKVK" misc_feature 979762..980049 /locus_tag="lmo0944" /note="Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family [Function unknown]; Region: YneR; COG4841" /db_xref="CDD:443869" regulatory 980080..980119 /regulatory_class="terminator" regulatory 980165..980170 /regulatory_class="ribosome_binding_site" gene 980177..981307 /locus_tag="lmo0945" /db_xref="GeneID:986792" CDS 980177..981307 /locus_tag="lmo0945" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein ComEC" /protein_id="NP_464470.1" /db_xref="GeneID:986792" /translation="MTKKLVICISLIAIFLSGCSFSEPSTSKSNITEKTLNGATFTFF DVGQGDSTLIQAEDGTTILIDTGRQDDDRILTYLKEANVKKIDLLLLTHPHADHIGNA DKVIATYNPKEIWMDGLTFSSSIYEKVIDAALASDAKYKEPRRGEKATFGPFNLEVLS PDKLENDANNDSIAVKITYKDISAIFTGDAEKGREREMVDSGANLEADILDLGHHGSS TSNQPFFLDKVKPQVAVYSAEMANSYGHPHVEVLEWLKERDIKTYGTDVNGTVIIETD GEKIHVQTEKSGTPKPGSSYNKENSTQKTEDATSEELPESINLNTASSEDLQLLPLIG PALAEKIIAERPYQSIDDLKKINGIGDGIVRQIKEQGIAVTK" misc_feature 980183..>980269 /locus_tag="lmo0945" /note="PhrK family phosphatase-inhibitory pheromone; Region: phero_PhrK_fam; NF038040" /db_xref="CDD:411633" misc_feature 980294..981025 /locus_tag="lmo0945" /note="DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily [Intracellular trafficking, secretion, and vesicular transport]; Region: ComEC; COG2333" /db_xref="CDD:441904" misc_feature 981095..981286 /locus_tag="lmo0945" /note="DNA uptake protein ComE or related DNA-binding protein [Replication, recombination and repair]; Region: ComEA; COG1555" /db_xref="CDD:441164" regulatory 981303..981308 /regulatory_class="ribosome_binding_site" gene 981317..981544 /locus_tag="lmo0946" /db_xref="GeneID:987862" CDS 981317..981544 /locus_tag="lmo0946" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0946" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464471.1" /db_xref="GeneID:987862" /translation="MKKAILDRIEDGKAVFLLEPDQTEWQIDKEKLDSSIKEGDIVTI SETNEIMKHPQETEEMKNRIAEKLERLRGRN" misc_feature 981326..981532 /locus_tag="lmo0946" /note="Protein of unknown function (DUF3006); Region: DUF3006; pfam11213" /db_xref="CDD:463240" gene 981621..981731 /locus_tag="lmos36" /db_xref="GeneID:18245140" misc_RNA 981621..981731 /locus_tag="lmos36" /product="LhrC-5" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245140" gene complement(981743..982960) /locus_tag="lmo0947" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986474" CDS complement(981743..982960) /locus_tag="lmo0947" /experiment="EXISTENCE:[PMID:19448609]" /note="hypothetical transport protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464472.1" /db_xref="GeneID:986474" /translation="MNSDLTNKKILTRSSKVMLVLGIVLIAANLRTPITSVGPLLGMI QSDLHLTNTMAGLLTTIPLLAFAGLSPFVSKLSRALGMEVLIFVALLTLVLGSLLRPF GGELNLFAGTFMIGLAIAVGNVILPSLIKKEFPFKLGLMTGVYSISMNLCAAIAAGLT VPIAMNNRFSWHGSMVFWAILGIVALVIWLPQLKYNQRSTEKIATHLVTTSVWKSPLA WKISLFMGSQSAIFYISIAWLPNILADQGLSSTSSGLMLSLMQFAVMPITFIIPIIAG RMKNQQLLVGISILFFLIGIFGIMFASGSILILSIAIIIYGIGSGMSFSLSMMFFNLR TTSATESADLSGMAQSIGYLFAASGPILFGTLHDALGSWQPTLYVLVGITMLMLYCGL DAGRNKFLFSQKK" misc_feature complement(981773..982903) /locus_tag="lmo0947" /note="2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters; Region: MFS_NIMT_CynX_like; cd17339" /db_xref="CDD:340897" misc_feature complement(order(981893..981895,981902..981907, 981914..981919,981926..981928,981977..981979, 981989..981991,982001..982006,982157..982159, 982169..982171,982250..982252,982259..982267, 982274..982279,982286..982288,982502..982504, 982511..982516,982523..982525,982580..982582, 982589..982597,982601..982606,982751..982753, 982847..982849,982856..982861,982868..982873)) /locus_tag="lmo0947" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340897" gene complement(982957..983646) /locus_tag="lmo0948" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986781" CDS complement(982957..983646) /locus_tag="lmo0948" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464473.1" /db_xref="GeneID:986781" /translation="MVEKIERKSLAEQVYDQIKAEITNGTWKIGERIPKEADLMAEFG ISRNTLREAIRALAHIGLLETKQGDGTFVRNNSELNAIMQKRVRESTVQEILEIRHAL DREAVILACDRRTEEDVETLEKYRQQCQLATEKNDVGAFVKADSALHLTIVKTAHNDL LLDMYVNILEEIQFSITSTTEMSPEANQHKGHAALVKAIEKRNKEQAAHEVTEYITLF KRIAAKNGEKK" misc_feature complement(982987..983640) /locus_tag="lmo0948" /note="DNA-binding transcriptional regulator, FadR family [Transcription]; Region: FadR; COG2186" /db_xref="CDD:441789" regulatory complement(982967..982972) /regulatory_class="ribosome_binding_site" /locus_tag="lmo0948" regulatory complement(983653..983658) /regulatory_class="ribosome_binding_site" regulatory 983758..983763 /regulatory_class="ribosome_binding_site" gene 983768..984814 /locus_tag="lmo0949" /db_xref="GeneID:987856" CDS 983768..984814 /locus_tag="lmo0949" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464474.1" /db_xref="GeneID:987856" /translation="MNWLEKLKENDTARRVLVFVLLGVVLYLLRSMIDLILLTFIFAF LVTRLENVILKRVRVPRKLIVIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLY NNPSDNTIVKWIVGFLKESNIQKYLQAGVDFIIASLSGIGSVGLSFFLALILSLFFSL EKERVTSFTGQFMTSKVGFIFKEAAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALY LMDFPQLLSLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAI ETYILNPKLMSSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILEVRNAED LKKRTLFGRKKKVD" misc_feature 983855..984751 /locus_tag="lmo0949" /note="Predicted PurR-regulated permease PerM [General function prediction only]; Region: PerM; COG0628" /db_xref="CDD:440393" regulatory 984799..984835 /regulatory_class="terminator" regulatory complement(984802..984838) /regulatory_class="terminator" gene complement(984823..985722) /locus_tag="lmo0950" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987861" CDS complement(984823..985722) /locus_tag="lmo0950" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0950" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464475.1" /db_xref="GeneID:987861" /translation="MKKVIILIIALAVIITGFWIIFLQFEPTKKEAKEPTVTANKTTT KEQNSVSEIAIPTLFVHGYSGTANSFGGMINRLAEDGDVTKSLVMNVAADGTVSSKGD YDKFSHNPTIQVIFEDNKSSAANQTQWIQNVMKELKNNYHIEKVYAVGHSMGGVSLTS YIEKVGNDKTYPVLEKLVLIGAPLNGLVIGDDGVTAYDLTDSGPKKSSDRYSEFMKNK QKIPTNLHVLNIAGDTLNGTKSDGSVSVASALSGKFIFEGQAASYEEKTFTGKNAAHS KLHENTNVDAEVADFLWGIEKVD" misc_feature complement(984841..985611) /locus_tag="lmo0950" /note="Uncharacterized conserved protein with an alpha/beta hydrolase fold [Function unknown]; Region: COG4814" /db_xref="CDD:443842" regulatory complement(985729..985734) /regulatory_class="ribosome_binding_site" gene complement(985743..986564) /locus_tag="lmo0951" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987836" CDS complement(985743..986564) /locus_tag="lmo0951" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0951" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464476.1" /db_xref="GeneID:987836" /translation="MLKRVFFSIILPLGCLVGAIFILLTINTTYPKAANDSIPTIFIH GYRGTDRSLHGMIRRFDQKYDWGTESLTVNVSPDGEISTTGTYNKKEKNPLINIVFED NRATLPQQSMWTKKVMSYLQQNYAIKKFNAVGHSMGGGAWVSYLASYEKNKSYPQVNK IVFLAVPFYPEEYVNGDQQVDIKNANNVHAKFAEKMAKVLPNNTEIMIIGGNLEDGSN SDGEVKLDSVLYGEKLFAHQKVTTHVIKGPQATHSSMHESTVVDKYVGQFLWGEK" misc_feature complement(985749..986480) /locus_tag="lmo0951" /note="Alpha/beta hydrolase of unknown function (DUF915); Region: DUF915; pfam06028" /db_xref="CDD:283645" regulatory complement(986574..986579) /regulatory_class="ribosome_binding_site" regulatory 986707..986712 /regulatory_class="ribosome_binding_site" gene 986722..987180 /locus_tag="lmo0952" /db_xref="GeneID:986763" CDS 986722..987180 /locus_tag="lmo0952" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0952" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464477.1" /db_xref="GeneID:986763" /translation="MIKRTGEIVLAIIGLVLSLLAQAFIAIIGLLMISGSKGKEGLTT FYNNYYKTMTEWEIPKKEVPDPDRVLDFVQTLSWTALTGGLITLALGIFGIYYIFKNK KPVFAGYLFLAAGVVSLLSTALISFIPALLFIVAAILCFVRKPKSTFSGL" misc_feature 986728..987084 /locus_tag="lmo0952" /note="Protein of unknown function (DUF4064); Region: DUF4064; pfam13273" /db_xref="CDD:433076" regulatory 987188..987210 /regulatory_class="terminator" regulatory 987260..987265 /regulatory_class="ribosome_binding_site" gene 987274..987501 /locus_tag="lmo0953" /db_xref="GeneID:986396" CDS 987274..987501 /locus_tag="lmo0953" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0953" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464478.1" /db_xref="GeneID:986396" /translation="MKNKVGIIAGAVGAVAGVLACAAVYVVKKQQPPTPFDEVNDIRT RYADKEISETELEENNMISEGGVSSLQYEEK" regulatory 987515..987559 /regulatory_class="terminator" regulatory 987722..987727 /regulatory_class="ribosome_binding_site" gene 987735..988049 /locus_tag="lmo0954" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986596" CDS 987735..988049 /locus_tag="lmo0954" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0954" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464479.1" /db_xref="GeneID:986596" /translation="MRAILIGVLIILLIAMILIVLLPAILAMVGAVLGFWSLKKLLEA RSVGEKVIYGVLIGVGALIILANLKGILVVVIIGAIIYFLTRNKNKPRKNDDVFDYPY NK" regulatory 988051..988056 /regulatory_class="ribosome_binding_site" gene 988065..988910 /locus_tag="lmo0955" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987852" CDS 988065..988910 /locus_tag="lmo0955" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0955" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464480.1" /db_xref="GeneID:987852" /translation="MANLFEKMKQWNKEVSEKIEKREEKRRNSVSYYMDKTKQEMKDA ERMVEKQRELKSLFYKEYKEMEVYVEKRRHQAEIAKEAGETKLADFALEEVAQYEEQL EATKAHYDQASEQLEKLELRMHEMRLKWKNLKTQHLAEMAEKNATETSEKMDKVIHDM SWGSVSDYHEAQKQRDLAEEAEKKADMSKELSQSFDDLMDELEKKTKKSKEIIKDKAQ NFTTMVDEIIEREKQNFKKPEKASMEDQLNELEKEAAKEKPKEEKEVLIPELEKKEEE NETDK" misc_feature 988071..988685 /locus_tag="lmo0955" /note="Phage shock protein A [Transcription, Signal transduction mechanisms]; Region: PspA; COG1842" /db_xref="CDD:441447" regulatory 988920..988952 /regulatory_class="terminator" regulatory 989084..989089 /regulatory_class="ribosome_binding_site" gene 989099..990232 /locus_tag="lmo0956" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986776" CDS 989099..990232 /locus_tag="lmo0956" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="N-acetylglucosamine-6P-phosphate deacetylase" /protein_id="NP_464481.1" /db_xref="GeneID:986776" /translation="MANKVITNATIYTGKGVLENAFVRFDKQILEVGSMADFQADKAE EVIDAKGQKLVPGFIDVHSHGGYSFDAMDADPEALRKQVNGMLNEGITTYFPTTMTQS HENIEKALKVINEVAQTEPVIGGIHLEGPFVSKVFKGAQPEEYIQAPDLELFKKWFDI SGGLIKLVTYAPEHDTSADFENLCFELGVVPSIGHSNDVREHLKTSKATHATHLYNAC HRMTHREPGVPGHVLLERGINAELIVDGIHVHPDMVKLAYQMKGPEHLCIITDSMRAK GMPEGKSELGGQTVIVKDKQARLEDGTLAGSVLTYDDGFRNMIKFTGCSVEEAVLMSS GNQAREFNLTQKGAIEAGKDADFNLLDEDLHITATYSFGKKHS" misc_feature 989108..990217 /locus_tag="lmo0956" /note="N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to...; Region: NagA; cd00854" /db_xref="CDD:238434" misc_feature order(989282..989284,989288..989290,989483..989485, 989516..989518,989681..989683,989735..989737, 989744..989749,989840..989842,989909..989911, 990008..990010) /locus_tag="lmo0956" /note="active site" /db_xref="CDD:238434" misc_feature order(989741..989743,989759..989761,989765..989770, 989774..989776,989795..989800,989837..989848, 989852..989857,989861..989866,989873..989875) /locus_tag="lmo0956" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238434" regulatory 990234..990239 /regulatory_class="ribosome_binding_site" gene 990248..990952 /locus_tag="lmo0957" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986480" CDS 990248..990952 /locus_tag="lmo0957" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glucosamine-6-phosphate isomerase" /protein_id="NP_464482.1" /db_xref="GeneID:986480" /translation="MQLITTENKLAGSKKALEIIEKGITSGEVNTLGLATGSTPETLY AELVKSDVDTKNVTTTNLDEYVGLAASDPNSYHYYMNDLLFSKKAFKESFLPNGEATD AEAECARYEEILSEHPIDIQVLGIGTNGHIGFNEPGTSFDSITHKVVLTDSTREANKR FFEREEDVPTHAYSMGIKSIMNAKKIILLAFGENKAQAIKETIKGPVDVNCPASVLQN HPDVTVILDNEAASLL" misc_feature 990278..990949 /locus_tag="lmo0957" /note="Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium. The reaction is an aldo-keto isomerization coupled with an amination or deamination. It...; Region: GlcN6P_deaminase; cd01399" /db_xref="CDD:238693" misc_feature order(990353..990364,990431..990436,990620..990625, 990638..990640,990644..990646,990725..990727, 990830..990832) /locus_tag="lmo0957" /note="active site" /db_xref="CDD:238693" misc_feature order(990659..990661,990665..990670,990692..990694, 990854..990874,990896..990904) /locus_tag="lmo0957" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:238693" misc_feature order(990662..990667,990683..990694) /locus_tag="lmo0957" /note="allosteric site [active]" /db_xref="CDD:238693" misc_feature order(990698..990700,990707..990739,990746..990754) /locus_tag="lmo0957" /note="active site lid [active]" /db_xref="CDD:238693" misc_feature order(990713..990715,990824..990826,990836..990838, 990929..990931,990938..990949) /locus_tag="lmo0957" /note="hexamer (dimer of trimers) interface [polypeptide binding]; other site" /db_xref="CDD:238693" regulatory 990954..990959 /regulatory_class="ribosome_binding_site" gene 990968..991690 /locus_tag="lmo0958" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986478" CDS 990968..991690 /locus_tag="lmo0958" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family transcirptional regulator" /protein_id="NP_464483.1" /db_xref="GeneID:986478" /translation="MIDKQSGIPIYIQIQSEIKKKMEDGVWKVGTSIPAERQLAEMFH VSRMTVRQAIQGLVDDNILQRRVGAGTFIAEKKLTERLEAVTSFTNLMLQEGKVPSTR IVSYGIRPASTQEQEALQLPENSNVMKIERIRYGDRVPILYEVAAIPEKIASLLTKED IMDSLYKAIELKLGQPIGEAEQIMEASLVSEKIAPYLDVKLGSPVMKLRQITTLEDGR PFEFTRSQYVGSRFQFVARIKQ" misc_feature 990980..991684 /locus_tag="lmo0958" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: MngR; COG2188" /db_xref="CDD:441791" regulatory 991697..991736 /regulatory_class="terminator" regulatory 991797..991802 /regulatory_class="ribosome_binding_site" gene 991810..992865 /locus_tag="lmo0959" /db_xref="GeneID:986475" CDS 991810..992865 /locus_tag="lmo0959" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="undacaprenyl-phosphate N-acetylglucosaminyltransferase" /protein_id="NP_464484.1" /db_xref="GeneID:986475" /translation="MSWMIIFICFGASVLLTPLIRKIALYFDITDKPDQRRINIKPIP SLGGLAIFISFTIGMFLLPIENEFLWPLLIAAFVMVLTGLLDDIMEFKARYKLIGQIT AAFIIVFWGNISIDFINLPFGGEIHFGMLSIPLTIIWIVAITNAINLIDGLDGLAAGV STIALLTILGMAFIMGDALVIMIASVLIAGTLGFLPYNFNPAKIFMGDTGALFLGFII SVLSVMGFKNVTFISLIVPILILGVPISDTLFAIIRRMVTKQPIAMADKSHLHHCLLR LGFTHRQTVILIYAIAALFSLFAFIFTMSTLWGSMILIGVLLVLIEVLIETLGLVGSS YRPLLNLFKLTKEEKID" misc_feature 991816..992676 /locus_tag="lmo0959" /note="UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase [Cell wall/membrane/envelope biogenesis]; Region: Rfe; COG0472" /db_xref="CDD:440240" regulatory 992865..992889 /regulatory_class="terminator" regulatory 992967..992972 /regulatory_class="ribosome_binding_site" gene 992978..993886 /locus_tag="lmo0960" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986469" CDS 992978..993886 /locus_tag="lmo0960" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="protease" /protein_id="NP_464485.1" /db_xref="GeneID:986469" /translation="MEIIATADSMKQAEQLLRAGVDRLYIGNSQFGLRLPYSFSVEEL REIVHLAHQEGKKVTVAVNSLMHNEHMEKLPGFLEQLADMEVDAVTCGDPGAIMLLSE MAQPIPFIYDAQTFVTSAEQISFWEKQGAIGAVLARELTEGEIKTIAHSLTIPVEVLV YGPTCIHQSKRKLVTNYERIVEMEDDTSKERGLYLREPNDETSQLPIYEDESGTHIFA SEDVSLVPYLADLYEAGLKTWKLDGVLAESENFVQIASLLVEAKEATLKGQFVAEYFV NKLTELQPQTRKLDAGFYLKNPDDVK" misc_feature 992978..993859 /locus_tag="lmo0960" /note="23S rRNA C2501 and tRNA U34 5'-hydroxylation protein RlhA/YrrN/YrrO, U32 peptidase family [Translation, ribosomal structure and biogenesis]; Region: RlhA; COG0826" /db_xref="CDD:440588" regulatory 993885..993890 /regulatory_class="ribosome_binding_site" gene 993900..995126 /locus_tag="lmo0961" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986465" CDS 993900..995126 /locus_tag="lmo0961" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="protease" /protein_id="NP_464486.1" /db_xref="GeneID:986465" /translation="MSKILKKPEVLAPAGNLEKLKIAIRYGADAVYIGGQAFGLRSRA GNFSFEEMKEGIAFAHERNAKVYVAANMVAHAGDTEGAGEFFLTLRDIGIDAVIVSDP ALISICFQDAPGLPVHLSTQASATNYKTLEFWKKQGLERVVLAREVSMQEIQEIGEKT DVEMEAFIHGAMCISYSGRCTLSNHMANRDANRGGCAQSCRWKYDLFEIDNGVSKNLV DTDEEPFSMSAVDLSMIKYIPDMVDAGVDSLKIEGRMKSIHYVSTVASVYRRAVDAYC ADPENYVFDPAWEEELWKVAQRELSTGFFYKEPTEDEQLFGKTRKIPQYAFAAQVLEY DEKTKIATLQQRNNFGVGEEIEFYGPGDTGFKQVVEVLWNEDGVEIDRAPNAMMTIKM PVDKPVKPFYFMRKKK" misc_feature 993915..994823 /locus_tag="lmo0961" /note="23S rRNA C2501 and tRNA U34 5'-hydroxylation protein RlhA/YrrN/YrrO, U32 peptidase family [Translation, ribosomal structure and biogenesis]; Region: RlhA; COG0826" /db_xref="CDD:440588" misc_feature 994878..995114 /locus_tag="lmo0961" /note="Peptidase family U32 C-terminal domain; Region: Peptidase_U32_C; pfam16325" /db_xref="CDD:465094" regulatory 995195..995200 /regulatory_class="ribosome_binding_site" gene 995210..995767 /gene="lemA" /locus_tag="lmo0962" /db_xref="GeneID:986467" CDS 995210..995767 /gene="lemA" /locus_tag="lmo0962" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LemA protein" /protein_id="NP_464487.1" /db_xref="GeneID:986467" /translation="MIGWIIAIAVVVILVLIYFGLYNSLVKYRNRVDETWAQIDVQLK RRFDLIPNLVETVKGYAKHEKETLTKVIEARNKMMEVPADNRQGQIEADNMLSGALKS IFALGEAYPDLKANTSFIELQHELTTTENKVAYSRQLYNTTVMTYNTKVQSVPTNIVA KLHNFTERDMLSIPEVERVAPKVEF" misc_feature 995213..995764 /gene="lemA" /locus_tag="lmo0962" /note="Magnetosome formation protein MamQ, lipoprotein antigen LemA family [Cell wall/membrane/envelope biogenesis]; Region: LemA; COG1704" /db_xref="CDD:441310" regulatory 995775..995780 /regulatory_class="ribosome_binding_site" gene 995790..996704 /locus_tag="lmo0963" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986470" CDS 995790..996704 /locus_tag="lmo0963" /experiment="EXISTENCE:[PMID:19448609]" /note="metalloprotease" /codon_start=1 /transl_table=11 /product="heat shock protein HtpX" /protein_id="NP_464488.1" /db_xref="GeneID:986470" /translation="MLFEQIAANKRKTIFIILGFFIFVLMVGAAIGIIVWNNYLNGLV LAAVIGAFYILIMVMSSSSVVMAMNHAKEVTSKEQAPVLWDTVESMAMVAGIPMPKVY IVEDPSPNAFATGISPEKGAVAVTRGLLNKLERYELEGVIAHEISHIRNYDIRLSTIA IALVAVIAILSDIAMRMIFWGSLTGGRNNRKSDNNNSGGAQAIIYIVALIFVILAPII ATAIQFALSRNREYLADASAVELTRNPDGLIQALQKISGDSKKMEEVSASSESIYFSS PLKSKKNKPGLFDSHPPISSRIERLENM" misc_feature 995790..996701 /locus_tag="lmo0963" /note="heat shock protein HtpX; Provisional; Region: PRK04897" /db_xref="CDD:235318" regulatory complement(996699..996734) /regulatory_class="terminator" regulatory 996710..996745 /regulatory_class="terminator" gene complement(996739..997557) /locus_tag="lmo0964" /db_xref="GeneID:986468" CDS complement(996739..997557) /locus_tag="lmo0964" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464489.1" /db_xref="GeneID:986468" /translation="MINQNLYYQSVANSKPIEIYLFFDPACDDCWNIEANMLRLQMEY GNYFKLRYVLHNNLQTFVCKQKRAGNSNLSLKEQQIGAHLSYISCLAVKAAELQGKKQ GITFLRKIQAAYFLENKDIASDEVLYDIAVSTGLDLSEFKKDLASTVAKRAYIGDQKV AQEMEIHENPTVVFFNKNIEDAGLKLSGLHRYEVYVHVLSELLNDAPQPEERPQMEEY LAKVKVTSSASMADFYGVSEQQIERQMKKWRLQQKVELIDAPAGQSHWKYIGNL" misc_feature complement(996967..997500) /locus_tag="lmo0964" /note="Region: Thioredoxin_5; pfam13743" /db_xref="CDD:404608" misc_feature complement(order(997468..997470,997477..997479)) /locus_tag="lmo0964" /note="catalytic residues [active]" /db_xref="CDD:239323" regulatory complement(997564..997569) /regulatory_class="ribosome_binding_site" gene complement(997795..998379) /locus_tag="lmo0965" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985451" CDS complement(997795..998379) /locus_tag="lmo0965" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464490.1" /db_xref="GeneID:985451" /translation="MVKELEIEFRNLLTKEEYDTLIENFRVKEDDFFEQTNYYLDTTN FGLKERHSALRIRQLETQYQLTLKTPEARGLMETTQILGEDQASAIISGANIPVGPVR DTLKELGINHEDLQVFGSLKTIRAEKDYKKGLLVFDKNFYGSISDFDLEYEVSDYDKG KEVFDKLLKEYQITNQPAENKVARFYHHVYENNK" misc_feature complement(997804..998373) /locus_tag="lmo0965" /note="Predicted triphosphatase or cyclase YjbK, contains CYTH domain [General function prediction only]; Region: YjbK; COG4116" /db_xref="CDD:443292" regulatory complement(998390..998395) /regulatory_class="ribosome_binding_site" gene complement(998396..998863) /locus_tag="lmo0966" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986839" CDS complement(998396..998863) /locus_tag="lmo0966" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0966" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464491.1" /db_xref="GeneID:986839" /translation="MILTLLQNGDYETARTQALTELKNNSDNAELHYYAAWAHDALGK EDAAIPFYEKALQLGLPADSRKEAYIGLGSTYRITGQPEKSIRLFETALQEFPDNNAL RTFSVMAKYNQGLEKEALEEALMLLTQTTSDEDILSYKKAIQFYAQDLDATFH" misc_feature complement(order(998630..998632,998639..998644, 998651..998656,998663..998665,998741..998746, 998750..998755,998762..998767,998774..998776, 998846..998848,998852..998857)) /locus_tag="lmo0966" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature complement(998672..>998854) /locus_tag="lmo0966" /note="Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]; Region: NrfG; COG4235" /db_xref="CDD:443378" misc_feature complement(998690..998782) /locus_tag="lmo0966" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(998414..998761) /locus_tag="lmo0966" /note="Tetratrico peptide repeat; Region: TPR_5; pfam12688" /db_xref="CDD:403783" misc_feature complement(998582..998668) /locus_tag="lmo0966" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" regulatory complement(998870..998875) /regulatory_class="ribosome_binding_site" regulatory 999010..999015 /regulatory_class="ribosome_binding_site" gene 999022..999690 /locus_tag="lmo0967" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986471" CDS 999022..999690 /locus_tag="lmo0967" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464492.1" /db_xref="GeneID:986471" /translation="MNHWEDFLAPYKQAVEELKIKLKGMRSQFELENNHSPIEFVTGR VKPVASILDKANQKHIALDHLVEEMQDIAGLRMMCQFVDDIEVVVRLLRQRNDFRIVE ERDYITNKKPSGYRSYHVVIEYPVETIQGEKKILAEIQIRTLAMNFWATIEHSVNYKY QGEFPEAINKRLKRAAEAAFQLDEEMSQIREEIQEAQVYFSQNKDVSKDKKAVHQVMP KKNK" misc_feature 999022..>999642 /locus_tag="lmo0967" /note="ppGpp synthetase catalytic domain (RelA/SpoT-type nucleotidyltranferase) [Nucleotide transport and metabolism, Signal transduction mechanisms]; Region: YjbM; COG2357" /db_xref="CDD:441924" regulatory 999705..999710 /regulatory_class="ribosome_binding_site" gene 999722..1000516 /gene="ppnK" /locus_tag="lmo0968" /db_xref="GeneID:986453" CDS 999722..1000516 /gene="ppnK" /locus_tag="lmo0968" /EC_number="2.7.1.23" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the phosphorylation of NAD to NADP" /codon_start=1 /transl_table=11 /product="inorganic polyphosphate/ATP-NAD kinase" /protein_id="NP_464493.1" /db_xref="GeneID:986453" /translation="MKYMITSKGDEKSDLLRLNMIAGFGEYDMEYDDVEPEIVISIGG DGTFLSAFHQYEERLDEIAFIGIHTGHLGFYADWRPAEADKLVKLLAKGEYQKVSYPL LKTTVKYGIGKKEATYLALNESTVKSSGGPFVVDVVINDIHFERFRGDGLCMSTPSGT TAYNKSLGGALMHPSIEAMQLTEMASINNRVYRTIGSPLVFPKHHVVSLQPVNDKDFQ ISVDHLSILHRDVQEIRYEVSAKKIHFARFRSFPFWRRVHDSFIED" misc_feature 999722..1000513 /gene="ppnK" /locus_tag="lmo0968" /note="inorganic polyphosphate/ATP-NAD kinase; Provisional; Region: ppnK; PRK04885" /db_xref="CDD:235317" regulatory 1000523..1000528 /regulatory_class="ribosome_binding_site" gene 1000535..1001425 /locus_tag="lmo0969" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986458" CDS 1000535..1001425 /locus_tag="lmo0969" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ribosomal large subunit pseudouridine synthetase" /protein_id="NP_464494.1" /db_xref="GeneID:986458" /translation="MFLEWKVETEEDGLLLRTFLKSKHISKQLLTAVKFGADGKIEVN NEEQNVLYHVKVGDKVRLTFPTEQQNERLLAEYTNLDIVFEDDFLLIINKPAGMASIP SQYHPNGSVANFVKGHYEAQGLTNAIHIVTRLDRETSGLMLIAKNRFAHARLSTFLQK GLLKRRYQAFISGVLVEQKGSIEAPIGRKEVSIMERFVTPEGKYAKTNYEVLARYRAF DHVAIQLETGRTHQIRVHFSYIGHPLIGDDMYGGDTNLLKRQALHSCHLHLVHPLTEE YMAFDLPLPADMEEIIQKSK" misc_feature 1000778..1001416 /locus_tag="lmo0969" /note="Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific [Translation, ribosomal structure and biogenesis]; Region: RluA; COG0564" /db_xref="CDD:440330" regulatory 1001490..1001495 /regulatory_class="ribosome_binding_site" gene 1001503..1002291 /locus_tag="lmo0970" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987821" CDS 1001503..1002291 /locus_tag="lmo0970" /EC_number="1.3.1.10" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes a key regulatory step in fatty acid biosynthesis" /codon_start=1 /transl_table=11 /product="enoyl-ACP reductase" /protein_id="NP_464495.1" /db_xref="GeneID:987821" /translation="MNLSLEGKTYVVMGVANKRSIAWAIARSLNEAGAKLVFTYADDR AKKSITELVPSLSEVNQNPLILACDVTSEEAITETFETIKDKAGKLSGLAHCIAFANK DFLTGDYLEVDRKSFLQAHEISAYSFTAVARALKHLEMLTEDASLLTLTYLGGERVVE NYNIMGVAKASLDASVRYLAMDLGAIGVRVNAISAGPIRTVSARGVSGFSDSISLVEE RAPLKRATQAEEVGDTAYYLFSNLSRGVTGEVIHVDSGYHIIGF" misc_feature 1001503..1002285 /locus_tag="lmo0970" /note="enoyl-[acyl-carrier-protein] reductase FabI; Region: PRK08594" /db_xref="CDD:236308" misc_feature order(1001542..1001550,1001560..1001565,1001623..1001625, 1001704..1001712,1001788..1001799,1001869..1001871, 1001950..1001958,1001986..1001988,1002007..1002009, 1002085..1002096,1002100..1002111) /locus_tag="lmo0970" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:187630" misc_feature order(1001593..1001595,1001710..1001721,1001728..1001730, 1001824..1001844,1001851..1001856,1001863..1001868, 1001875..1001880,1001887..1001889,1001899..1001901, 1001908..1001910,1001962..1001967,1001971..1001982, 1001986..1001991,1001998..1002003,1002010..1002015, 1002022..1002027,1002031..1002048,1002052..1002057, 1002136..1002138,1002145..1002147,1002163..1002174, 1002190..1002192,1002199..1002204,1002211..1002213, 1002226..1002228,1002232..1002270,1002274..1002285) /locus_tag="lmo0970" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:187630" misc_feature order(1001710..1001721,1001824..1001844,1001851..1001856, 1001863..1001868,1001875..1001880,1001887..1001889, 1001896..1001901,1001908..1001910,1001962..1001967, 1001971..1001979,1001986..1001991,1001998..1002003, 1002010..1002015,1002022..1002027,1002031..1002039, 1002043..1002051) /locus_tag="lmo0970" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187630" misc_feature order(1001794..1001796,1001800..1001802,1001956..1001958, 1001986..1001988,1001995..1001997,1002007..1002009, 1002106..1002111,1002118..1002120,1002127..1002129) /locus_tag="lmo0970" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187630" misc_feature order(1001872..1001874,1001956..1001958,1001995..1001997, 1002007..1002009) /locus_tag="lmo0970" /note="active site" /db_xref="CDD:187630" regulatory complement(1002294..1002334) /regulatory_class="terminator" regulatory 1002301..1002330 /regulatory_class="terminator" gene complement(1002319..1003593) /gene="dltD" /locus_tag="lmo0971" /db_xref="GeneID:986447" CDS complement(1002319..1003593) /gene="dltD" /locus_tag="lmo0971" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DltD protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid" /protein_id="NP_464496.1" /db_xref="GeneID:986447" /translation="MKKKLWMTFGPLLVAFAVFLFVLFGPSSLFSKVSSDTVEKSATS MNESVIQGLDIQKKALQEGNYLPIYGSSELSRVDPFHPSVVSKKYNQGYTPFLLGRPG TQSLSHFLDVNALGDDLKGKKVAVVLSPQWFQPKGVSDPSFGANFSPLHAYKFALEDT KNTPERRYAAKRLLSFQVVQSDSTLKKLLENIVAKGPKKPHDPKLLNITGNVELKILE RKDDLESKYIIGSKQDRVSKGLKELPETLDYQQLDELAKETGERSTGNNPFQVKEHYY QKKIKPIEGKLKNSRKDLRYDQSPEFADLQLLMDAFKKAGADVIFINPPINGKWIDYI GMDKQGLDDYYAKTKEQIESQGFRYYSLEEYQNDAFFLEDPIHLSWRGWVKIDQVLAD FVKEPIQTNYKPTPKEYYFKEHPENGPKKDRK" misc_feature complement(1002340..1003593) /gene="dltD" /locus_tag="lmo0971" /note="Poly-D-alanine transfer protein DltD, involved in esterification of teichoic acids [Cell wall/membrane/envelope biogenesis]; Region: DltD; COG3966" /db_xref="CDD:443166" gene complement(1003593..1003829) /gene="dltC" /locus_tag="lmo0972" /db_xref="GeneID:986460" CDS complement(1003593..1003829) /gene="dltC" /locus_tag="lmo0972" /EC_number="6.1.1.13" /experiment="EXISTENCE:[PMID:19448609]" /note="D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid" /codon_start=1 /transl_table=11 /product="D-alanine--poly(phosphoribitol) ligase subunit 2" /protein_id="NP_464497.1" /db_xref="GeneID:986460" /translation="MAFRENVLEILEEITETDEVVQNTNIKLFDEGLLDSMATVQLLI EIEEKLDITVPVSEFDRDEWATPEMIITQLEALK" misc_feature complement(1003596..1003829) /gene="dltC" /locus_tag="lmo0972" /note="D-alanine--poly(phosphoribitol) ligase subunit DltC; Region: PRK05087" /db_xref="CDD:179929" regulatory complement(1003604..1003609) /regulatory_class="ribosome_binding_site" /gene="dltC" /locus_tag="lmo0972" regulatory complement(1003839..1003844) /regulatory_class="ribosome_binding_site" gene complement(1003855..1005039) /gene="dltB" /locus_tag="lmo0973" /db_xref="GeneID:986448" CDS complement(1003855..1005039) /gene="dltB" /locus_tag="lmo0973" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DltB protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid" /protein_id="NP_464498.1" /db_xref="GeneID:986448" /translation="MSLPYGTILYFGVLVLFLIPIIVAGLLGKRLPIYNAFVTLVFLY FMFSASPVQGATFIFFVFWQLALVRLYFHYRQEKKRNHGGVFVIAVILSILPLVISKV VPILGDHVTMVGFLGISYLTFKATQMIIEIRDNLIKQYNAWDFVNFLLFFPTISSGPI DRFRRFKKDVDNPPSKEAYLALLNRGIFLIFLGFLYKFIIAYLVNKHFVVPLDIAITH NVDTTKSLIGYMYAYSMYLFFDFAGYSAFAVGVSYLLGVQTPMNFNKPFAARNIKEFW NRWHMTLSFWFRDYVFMRFVFWVTKKKWFKSKFTIAYLAYFVNFFIMGVWHGLHWYYI VYGLYQATLIVGFDLFERFNKKHKFYPKNKITYVIGVIITFQFVCFGFLIFSGILDKI NF" misc_feature complement(1003873..1005030) /gene="dltB" /locus_tag="lmo0973" /note="D-alanyl-lipoteichoic acid biosynthesis protein DltB; Region: LTA_dltB; TIGR04091" /db_xref="CDD:274974" gene complement(1005036..1006568) /gene="dltA" /locus_tag="lmo0974" /db_xref="GeneID:986449" CDS complement(1005036..1006568) /gene="dltA" /locus_tag="lmo0974" /EC_number="6.1.1.13" /experiment="EXISTENCE:[PMID:19448609]" /note="transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid" /codon_start=1 /transl_table=11 /product="D-alanine--poly(phosphoribitol) ligase subunit 1" /protein_id="NP_464499.1" /db_xref="GeneID:986449" /translation="MTTSIIERIDAWAEKTPDFPCYEYAGTRLSYKELKRQSDAFGSF LLKNLITDKEKPIIVYGHMSPLMLVAFLGSIKSGRAYVPVDVSMPVERIEQIKKAADP SMFICTEELPNNLTITGCPVLTQDQLMDALEKHFGEVPDKEACVNNDDNYYIIYTSGS TGNPKGVQISQNNLVSFSNWILQDFSLSQGLRFLNQAPFSFDLSVMDLYPSLLSGGTL VPLDKTITANMKDLYREIPAQNLDVWVSTPSFADLCLLDENFNQENNPRLTRFLFCGE VLAKKTASELLDRFPDAVIYNTYGPTEATVAVTQVKVTREIIDAYPSLPLGVIKPDMR LHIVDQETGEVLPEGEKGEIVLIGASVSKGYLNEPEKTDQVFFDYKGYQAYRTGDSGI IKDGYLFFQGRLDFQIKLHGYRIELEDIENNLKKVSYIQNCAIIPKMKDEKVDMLVAQ VIPTTHDFEKEYQLSAAIKKELKEFMPAYMIPRKWIYKTDFPLTMNGKIDRKSLNSEV NK" misc_feature complement(1005039..1006559) /gene="dltA" /locus_tag="lmo0974" /note="D-alanine--poly(phosphoribitol) ligase, subunit 1; Region: D-ala-DACP-lig; TIGR01734" /db_xref="CDD:273780" regulatory complement(1005047..1005052) /regulatory_class="ribosome_binding_site" /gene="dltA" /locus_tag="lmo0974" regulatory complement(1006577..1006581) /regulatory_class="ribosome_binding_site" regulatory 1006946..1006951 /regulatory_class="ribosome_binding_site" gene 1006959..1007633 /locus_tag="lmo0975" /db_xref="GeneID:986443" CDS 1006959..1007633 /locus_tag="lmo0975" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway" /codon_start=1 /transl_table=11 /product="ribose-5-phosphate isomerase A" /protein_id="NP_464500.1" /db_xref="GeneID:986443" /translation="MINQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNG LHITGVATSEETNKQAQNLGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLR EKMVASASLKNIWVVSEEKLVRNLGKFPLPLEVIPFGWKQVERKLEKEHIQTNLRKQS SGEVYVTNNGNYILDIVNQTFTDAEMWQEKLAQIPGIVEHGLFLHYVDIIICAKANGE IELIKK" misc_feature 1006959..1007609 /locus_tag="lmo0975" /note="ribose-5-phosphate isomerase RpiA; Region: PRK00702" /db_xref="CDD:234816" misc_feature order(1007034..1007036,1007118..1007120,1007127..1007132, 1007157..1007159,1007163..1007165,1007244..1007249, 1007427..1007432,1007454..1007456,1007460..1007462, 1007472..1007474) /locus_tag="lmo0975" /note="tetramer (dimer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:238692" misc_feature order(1007034..1007036,1007040..1007045,1007199..1007204, 1007208..1007210,1007238..1007249,1007265..1007267, 1007319..1007321) /locus_tag="lmo0975" /note="active site" /db_xref="CDD:238692" misc_feature order(1007166..1007168,1007178..1007180,1007262..1007264, 1007283..1007285,1007367..1007372,1007376..1007384, 1007391..1007393,1007532..1007537,1007550..1007552) /locus_tag="lmo0975" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238692" regulatory 1007624..1007667 /regulatory_class="terminator" regulatory complement(1007631..1007662) /regulatory_class="terminator" gene complement(1007669..1008112) /locus_tag="lmo0976" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986442" CDS complement(1007669..1008112) /locus_tag="lmo0976" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464501.1" /db_xref="GeneID:986442" /translation="MTVKKVTDDIGKQAALKIRNDVFVVEQRVDPALEWDEFDEIDSV VMFVDYAEDGTPLATGRFREKDGYGKVERICTQKVARGTGSGRRIMEAIESEAKSRGL TTLKLGAQVTAIPFYEKLGYETCSGLFLDAGIEHKDMKKTLTYEI" misc_feature complement(1007681..1008076) /locus_tag="lmo0976" /note="Predicted N-acyltransferase, GNAT family [General function prediction only]; Region: ElaA; COG2153" /db_xref="CDD:441756" regulatory complement(1008121..1008126) /regulatory_class="ribosome_binding_site" gene complement(1008130..1008879) /locus_tag="lmo0977" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986913" CDS complement(1008130..1008879) /locus_tag="lmo0977" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464502.1" /db_xref="GeneID:986913" /translation="MTANKMLDEKFYSKSLGEELDLIICLPPDFSPLYKYPLFIVQDG KDYFQFGKLARHSEELALNEQIQKAIFIGIPYKTVMDRREKYHPDGKQNDAYIKFLAF ELVPYLEERFPSFQMPTSRFLMGDSLGASVSLKAALLFPFTFGNVILHSPYVDDTILT LAEKVDPSKVKIFHIIGDQETAVETTGNEVLDFLSPNKSLEQILTTRGFDYYFHVFNG DHRWKYWQPFIKDSLQYMLPVNTFDLESMRA" misc_feature complement(1008166..>1008867) /locus_tag="lmo0977" /note="Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism]; Region: Fes; COG2382" /db_xref="CDD:441948" regulatory complement(1008888..1008893) /regulatory_class="ribosome_binding_site" regulatory 1009086..1009091 /regulatory_class="ribosome_binding_site" gene 1009098..1010117 /locus_tag="lmo0978" /db_xref="GeneID:986440" CDS 1009098..1010117 /locus_tag="lmo0978" /EC_number="2.6.1.42" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids" /codon_start=1 /transl_table=11 /product="branched-chain amino acid aminotransferase" /protein_id="NP_464503.1" /db_xref="GeneID:986440" /translation="MSKDIDWSNLGFSYIKTDKRYISYWKDGEWDEGALTEDNTLHIS EGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDA VMQVVRANEEFVPPYGTGATLYLRPFVIGVGDNIGVHAAPEYIFSVFCSPVGPYFKGG MAPTNFIVSDFDRAAPNGTGAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTKIE EVGSANFFGITKDDKFVTPYSPSILPSITKYSLLYLAEHRLGLEAVEGDVYIDKLDEF KEAGACGTAAVITPIGGIQTKDDFHVFHSETEVGPVTKRLFDELCGIQFGDVEAPEGW IYKVK" misc_feature 1009098..1010114 /locus_tag="lmo0978" /note="branched-chain amino acid aminotransferase; Provisional; Region: PRK13357" /db_xref="CDD:237363" regulatory 1010125..1010143 /regulatory_class="terminator" regulatory 1010297..1010302 /regulatory_class="ribosome_binding_site" gene 1010313..1011077 /locus_tag="lmo0979" /db_xref="GeneID:986435" CDS 1010313..1011077 /locus_tag="lmo0979" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="daunorubicin resistance ATP-binding protein" /protein_id="NP_464504.1" /db_xref="GeneID:986435" /translation="MKEVMIKATGLEKSFKKTEVLKGVDFEVKHGEIFALLGSNGAGK TTTIQILATLLKADNGNAHISGFDVKTEPEKVRKHISLTGQFAAVDGLLTGRENILLI AKLRGEKNPAQTADDLLARFGLEKAADRRADTYSGGMTRRLDIAMSLVGSPDVIFLDE PTTGLDPEGRMEVWKTIKTLSDGGTTILLTTQYLDEAEQLADRIAILHGGTIIANGTL DELKKLFPPAEVEYIEKQPSLEEIFLAIINGKEEVK" misc_feature 1010328..1011068 /locus_tag="lmo0979" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" regulatory 1011061..1011066 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0979" gene 1011074..1011826 /locus_tag="lmo0980" /db_xref="GeneID:986436" CDS 1011074..1011826 /locus_tag="lmo0980" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_464505.1" /db_xref="GeneID:986436" /translation="MKAVRDTSILFGRSMRHIMRSPDTIITVAIIPIMIMLMFVYVLG GAIQTGTDNYVDYLLPGIILMAIASGIAYTAVRLFTDVQKGLFQRFHSMPISRSSVLW GHVLTSLVSNAISIVLIILVALLIGFRSSAGIVEWLAVAGILLLFTLALTWVAVIPGL TAKSVDGASAFSYPLIFLPFISSAFVPTDTMPTAIRVFAENQPVTAIVNTIRALLYSE PIGNDIWIALAWCVGITVVAYVFAVTIYKKMV" misc_feature 1011233..1011820 /locus_tag="lmo0980" /note="ABC-type multidrug transport system, permease component [Defense mechanisms]; Region: YadH; COG0842" /db_xref="CDD:440604" regulatory complement(1011825..1011857) /regulatory_class="terminator" regulatory 1011836..1011868 /regulatory_class="terminator" gene complement(1011860..1013335) /locus_tag="lmo0981" /db_xref="GeneID:986765" CDS complement(1011860..1013335) /locus_tag="lmo0981" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_464506.1" /db_xref="GeneID:986765" /translation="MEQTKVKAVTIAVFVATFMAAIEGTIVSTAMPTIVSQLDGIELM NWIFSVYLLTSAVTVPIYGKLSDLYGRKNIFVIATIIFIIGSSLCGFAQNMEQLIIFR AIQGIGAGGILPSTMTIIADVYPFEKRAKVLGFMGSAWGIAGVFGPLVGGFLVDQLSW HWIFFINVPIGILTILLILLYLREKVEHVKLPIDYLGASLFTVALLGLLFALQRAGES LNWTEPLVVILFAVSIVLFIAFYFVEKRAKDPIMPFVLFKNPVVLIGNLIGFLISAFL IGINVYIPMWAQGMLGHGATIAGFMLAPLSVTWIIGSFIGGKLLMTLGNRHTVGIGVL ITAASGLILALFPASTNDIFFYLNSAFMGFGFGIIFTTTTVTVQDAVPRFQTGIATAS NTLFRTVGQTIGVAVFGTIFNSVLTSEFRAAAGSEVNRSNLNQLISPQTSGNVSTDLV DPLRDILYSGLHTVFWVMFACCIVSYFIHFILPKKHISGEK" misc_feature complement(1012115..1013299) /locus_tag="lmo0981" /note="Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_Azr1_MDR_like; cd17502" /db_xref="CDD:341045" misc_feature complement(order(1012133..1012135,1012142..1012147, 1012154..1012159,1012166..1012168,1012214..1012216, 1012226..1012228,1012238..1012243,1012397..1012399, 1012409..1012411,1012493..1012495,1012502..1012510, 1012517..1012522,1012529..1012531,1012904..1012906, 1012913..1012918,1012925..1012927,1012985..1012987, 1012994..1013002,1013006..1013011,1013159..1013161, 1013252..1013254,1013261..1013266,1013273..1013278)) /locus_tag="lmo0981" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341045" regulatory complement(1013343..1013348) /regulatory_class="ribosome_binding_site" regulatory 1013462..1013467 /regulatory_class="ribosome_binding_site" gene 1013475..1014527 /locus_tag="lmo0982" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986804" CDS 1013475..1014527 /locus_tag="lmo0982" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidase" /protein_id="NP_464507.1" /db_xref="GeneID:986804" /translation="MSYEPNTKETMQKIKELTSIPSPTGNTGKIIEKLAKDLDASKIP YRLNNKGGLIVTLPGKDETKHRMLTAHVDTLGAMVKEIKADGRLLLTLIGGYRFNAIE GEYCTIETSAGDLYSGTILMHQTSVHVYKDAGTAERNDKNMEVRLDVKALDADKVRAL GIEVGDFVSFDPRVQIINDEYIKSRHLDDKASVAILLQLINHIHENNLELPHTTHFLI SNNEEIGYGGNSNIPAETVEYLAVDMGALGDGQTSDEYTVSICAKDGSGPYHLGLRKH LVELAKKNNIDYKVDIYPFYASDASAAINAGNDIIHGLIGPGIDASHAYERTHRDSLY HTEKLVYAYLFSNILK" misc_feature 1013499..1014506 /locus_tag="lmo0982" /note="M42 Peptidase, endoglucanase-like subfamily; Region: M42_glucanase_like; cd05657" /db_xref="CDD:349907" misc_feature order(1013544..1013552,1013565..1013567,1013577..1013579, 1013613..1013618,1013625..1013627,1013706..1013714, 1013745..1013747,1013781..1013789,1013820..1013825, 1013829..1013831,1013904..1013906,1013910..1013918, 1013964..1013969,1013997..1013999,1014003..1014005, 1014015..1014017,1014021..1014023,1014153..1014155, 1014162..1014167,1014234..1014242,1014258..1014260, 1014306..1014308,1014348..1014350,1014384..1014386, 1014432..1014437,1014444..1014446,1014453..1014455) /locus_tag="lmo0982" /note="putative oligomer interface [polypeptide binding]; other site" /db_xref="CDD:349907" misc_feature order(1013685..1013687,1014036..1014038,1014138..1014143, 1014150..1014152,1014201..1014212,1014351..1014353, 1014360..1014365,1014438..1014443) /locus_tag="lmo0982" /note="putative active site [active]" /db_xref="CDD:349907" regulatory 1014526..1014531 /regulatory_class="ribosome_binding_site" gene 1014540..1015019 /locus_tag="lmo0983" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986438" CDS 1014540..1015019 /locus_tag="lmo0983" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glutathione peroxidase" /protein_id="NP_464508.1" /db_xref="GeneID:986438" /translation="MNVHDFSEKAMNGKEIALSDYKGKVLLIVNTASKCGLTPQLEGL EAMYKKLGGDNFEILGFPCNQFLRQDPGSDEEILEFCQMNYGVTFQMFSKIKVKGKDA SPLYKYLTEQTGGKKVEWNFAKFLIDENGEVIERFPSKMKPEDFEDKVEALVAKVNN" misc_feature 1014540..1014998 /locus_tag="lmo0983" /note="Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid transport and metabolism]; Region: BtuE; COG0386" /db_xref="CDD:440155" regulatory 1015026..1015065 /regulatory_class="terminator" regulatory 1015140..1015145 /regulatory_class="ribosome_binding_site" gene 1015153..1015608 /locus_tag="lmo0984" /db_xref="GeneID:986785" CDS 1015153..1015608 /locus_tag="lmo0984" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464509.1" /db_xref="GeneID:986785" /translation="MKFHVKQNNNLAVGEVDVYCHPDNLEEVTNIVMGIDEPTEKISV KKDGATYLLEPKAILYFEAVESKIFVYTEKEIYEIHWKLYELEEKFKDSSFFRCSKSM ILNIEWIEKIAPGFHGKFEAKLFNREKVIISRQYAKVLKQKLNMGGKRK" misc_feature 1015294..1015587 /locus_tag="lmo0984" /note="LytTr DNA-binding domain; Region: LytTR; pfam04397" /db_xref="CDD:427920" regulatory 1015590..1015595 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0984" gene 1015605..1016033 /locus_tag="lmo0985" /db_xref="GeneID:986431" CDS 1015605..1016033 /locus_tag="lmo0985" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0985" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464510.1" /db_xref="GeneID:986431" /translation="MSTKLIQFIQSACIIFSASIITMICSYIATGESETVAIRDIFIM LGFSIVTTFIQQLFFNNSVKTKLAFYSRLIAFFLFIGAAILGLGWLLDWYHNIAGFMI IFGFICVTFLVMHIFFSFRDVKFSNEINQKLAEMRERETK" regulatory 1016019..1016024 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0985" gene 1016030..1016941 /locus_tag="lmo0986" /db_xref="GeneID:986427" CDS 1016030..1016941 /locus_tag="lmo0986" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="antibiotic ABC transporter ATP-binding protein" /protein_id="NP_464511.1" /db_xref="GeneID:986427" /translation="MIKLTNVVKKFGKIEAVKGINLEVEKGSLFAFLGENGAGKSTTL SMICTESEPTSGEIYIDDEKLTFKNRKLFRQKLGVVFQENVLDDLLTVRENLYNRASL YGKTKAEITERLALVSSIMGIEDILNRRFEKLSGGQKRRAEIARAIMHDPEILLLDEP TTGLDPKTRVSVWKIIDYLREELGMTVFLTTHYLEEAKDADQLAVIHKGKIIAQGTPT NIRSRFSVDKIFFYDAKVAELQKIMKKANLPFKVSKATMRVDVITQDVEILAILNQAA GLYGSFEVIKGNLDDAFISMIKEESDD" misc_feature 1016033..1016701 /locus_tag="lmo0986" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" regulatory 1016922..1016927 /regulatory_class="ribosome_binding_site" /locus_tag="lmo0986" gene 1016934..1017788 /locus_tag="lmo0987" /db_xref="GeneID:986424" CDS 1016934..1017788 /locus_tag="lmo0987" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="CylB protein" /protein_id="NP_464512.1" /db_xref="GeneID:986424" /translation="MISRNLKIYFRDRTAVFMSLLTVLIIIGLYAIFLGNNMEEMFKQ ASGKTVGIQELVNTWVIAGILSITPVTVSLAVFSLKVHDEELSIARSFAITSASRWRI VISYIVSGLVASFLLSVITLFVGEMYIWLTGGEFLPFESWIRLIGIILINVLCCSSIM FFIASLVKKASAFSSVSTIVGTVIGFIAGIYLPIGSLPAAVQTAMKCFPFTYGASTIR EIMTKEPLKEVFAGNTGAMDATKEMIGITIYWGDKTVTTGLSLLILSAFAVVFGVLSV ILMKRQTK" misc_feature 1017105..1017785 /locus_tag="lmo0987" /note="ABC-type multidrug transport system, permease component [Defense mechanisms]; Region: YadH; COG0842" /db_xref="CDD:440604" regulatory 1017855..1017860 /regulatory_class="ribosome_binding_site" gene 1017870..1019438 /gene="prfC" /locus_tag="lmo0988" /db_xref="GeneID:986429" CDS 1017870..1019438 /gene="prfC" /locus_tag="lmo0988" /experiment="EXISTENCE:[PMID:19448609]" /note="stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein" /codon_start=1 /transl_table=11 /product="peptide chain release factor 3" /protein_id="NP_464513.1" /db_xref="GeneID:986429" /translation="MSQDLQKEVASRKTFAIISHPDAGKTTITEQLLLFGGVIRSAGT VKGKKSGKFATSDWMEIEKQRGISVTSSVMQFDYNGSRINILDTPGHSDFSEDTYRTL MAVDSAVMVIDAAKGIEAQTLKLFKVCRMRGIPIFTFINKMDRQGKMPLELLAELEEV LGIESYPMNWPIGMGKELAGLYDRYHRVIEQYRSEEDERFLPLGEDGDLKEAHAIQKS LYYDQALEEIMLLDEAGNDFSRERIIAGEQTPVFFGSALTNFGVETFLRTFVDFAPAP SSHESNEGVIEADNPKFSGFIFKIQANMNPAHRDRIAFIRICSGEFERGMNVTLTRTG KSLKLANSTQFMADDRETVNRAVAGDIIGLYDTGNYQIGDTITNGSKKLEFEKLPQFT PELFMRVYAKNVMKQKHFHKGVEQLVQEGAIQLFKTWRTEEYIIGAVGQLQFEVFEHR MRGEYNSEIRMEPIGKKIARWVKEEDADEKLSTARSMLVKDRFDQPLFLFENEFAINW FNDKNPDIELTSLL" misc_feature 1017876..1019432 /gene="prfC" /locus_tag="lmo0988" /note="Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis]; Region: PrfC; COG4108" /db_xref="CDD:443284" regulatory 1019445..1019485 /regulatory_class="terminator" regulatory 1019532..1019537 /regulatory_class="ribosome_binding_site" gene 1019545..1019970 /locus_tag="lmo0989" /db_xref="GeneID:986432" CDS 1019545..1019970 /locus_tag="lmo0989" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="NP_464514.1" /db_xref="GeneID:986432" /translation="MRREKTMDTLIRSIMIKSKRKMDAKVAQFGLTTQQARVLGFLND NAANEIIQKDLQRIFQTRGASITSLIQGLEKKQLISRKPSIRDGREKVVTLTEEGKRI VDEFNESFPREDDKAKKILSADEYKIFIDLLSKIDDNTE" misc_feature 1019572..1019961 /locus_tag="lmo0989" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" regulatory 1020009..1020014 /regulatory_class="ribosome_binding_site" gene 1020022..1021383 /locus_tag="lmo0990" /db_xref="GeneID:986420" CDS 1020022..1021383 /locus_tag="lmo0990" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464515.1" /db_xref="GeneID:986420" /translation="MKHSDNYYLTKASIPKAIAHLSIPMMLGMSVGVIYNIVNAFFIG LLHDTSMLTAVTLGLPMFTILMAIGNMFGVGGGTYISRLLGKEEGTKAKQVSAFVLYG SLVLGILCAILLGFLINPVTHFLGADATSFLHTKNYTLALLICSPFIIANFALEQVVR AEGASRVSMNGMLIGTVVNLVFDPLLILYFDFNVVGAAVSVGLASLFSLIYYAWYLEK KSDYLSIRFKWFQASKEIVQNVFKIGVSELLLSLFLIVTTLVLNHYSMIYGEGVVAGF GVALRVVQLPEFICMGLYMGIIPLLAYNYGSGNIARFEKAIRFTAISIGLIVLLLSSL VFIFRFQVMHLFSDSQSVITLGVHIMVAMLISSLFSGFTGLFTSTFQAIGKAIPATIM SVSQGIIFIPVIILGQHYFGLMGVIWSLTATEILTCIIGVTLFTIHNIKIASSAKTKD LAV" misc_feature 1020058..1021326 /locus_tag="lmo0990" /note="Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA; Region: MATE_MepA_like; cd13143" /db_xref="CDD:240548" gene 1021463..1021588 /locus_tag="lmos37" /db_xref="GeneID:18245188" misc_RNA 1021463..1021588 /locus_tag="lmos37" /product="yybP-ykoY" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245188" regulatory 1021649..1021654 /regulatory_class="ribosome_binding_site" gene 1021665..1022432 /locus_tag="lmo0991" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986787" CDS 1021665..1022432 /locus_tag="lmo0991" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464516.1" /db_xref="GeneID:986787" /translation="MDTAMILEYGWVLLVLIGLEGILAADNAVVMAVMVKHLPDKQQK KALFYGLMGAFVFRFGALFLISFLANVWQVQALGAAYLLYIAISHIWKHAKGKDGEKE KKEKAGSGFWMTVLKVEIADIAFAIDSMLAAVALAITLPETGWGHIGGIDTGQFAIMF LGGLVGLIIIRFAATQFVKLLKSYPSLETAAFLIVGWVGVKLVIYTLAHPSLGVIPHS FPESTLWKLIFWGVMILIIVWGWFVSYRSKKKTETTK" misc_feature 1021713..1022402 /locus_tag="lmo0991" /note="integral membrane protein, YkoY family; Region: R_switched_YkoY; TIGR03716" /db_xref="CDD:274742" regulatory 1022518..1022523 /regulatory_class="ribosome_binding_site" gene 1022535..1023302 /locus_tag="lmo0992" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986459" CDS 1022535..1023302 /locus_tag="lmo0992" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464517.1" /db_xref="GeneID:986459" /translation="MDVSIWGEYALVFLVLVVLEGILSADNAVVMAVIVKGLPHDKQR KALFYGLVGAFVFRFVALFLISFLVKIWEIQAIGAVYLLYLAIKHMWRLKKGKQEEVK EASEAKSTSFWGVVARVELTDIAFALDSMLAAAALVVTLPDLGNFDIGGMNGGQFIVM FLGGIAGLVVIRFAATQVVKLLERYPTLETAAFLIVGWVGVKMAVLTLAHPSVAIIPG DFPDSAVWKLTFWSVMIIIGLGGYIIARKKEKKTKRV" misc_feature 1022592..1023278 /locus_tag="lmo0992" /note="integral membrane protein, YkoY family; Region: R_switched_YkoY; TIGR03716" /db_xref="CDD:274742" gene 1023346..1024680 /locus_tag="lmo0993" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986421" CDS 1023346..1024680 /locus_tag="lmo0993" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Na+-transporting ATP synthase subunit J" /protein_id="NP_464518.1" /db_xref="GeneID:986421" /translation="MARMTPVQVIIAYYFLAVTISTIVLSLPFTLQKGVKVSFIDTLF TAASSVSVTGLTTVDVSQTYSTAGIWVLMAIFQIGGLGVMMISTFFYLILKRRIGLKQ RQLIMTDTNQFTMSGMVRMLREILVLIFGIELIGALILGIYFIPLYPNFWDAMFQGLY NSVSLVTNAGVDITGKSLMPFANDYFVQFISILLIIAGAIGFPVLLETRRFLFEKNTL IPFRFSLFVKVTTLTYFVLLIVGGLLIWLFEYHHFFSGKSWDFGFFNSMFLSATSRSA GLQTIDSGALSISTLLLVSFLMFIGASPSSVGGGIRTTTFAITILFIYSVIRGRKHVY IFGRELHQEDVRKSLAVTLVAGFLSISAIVVLMQTETASLIAVIFEVFSAFGTTGLSV GLTPDLSTPGKIIIIALMFIGRVGIMYSMLSLRNKNQPKNAIRLPKEKIITG" misc_feature 1023361..1024599 /locus_tag="lmo0993" /note="Trk-type K+ transport system, membrane component [Inorganic ion transport and metabolism]; Region: TrkG; COG0168" /db_xref="CDD:439938" regulatory 1024689..1024721 /regulatory_class="terminator" regulatory complement(1024719..1024754) /regulatory_class="terminator" gene complement(1024761..1025129) /locus_tag="lmo0994" /db_xref="GeneID:986414" CDS complement(1024761..1025129) /locus_tag="lmo0994" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0994" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464519.1" /db_xref="GeneID:986414" /translation="MGSRKPEIIIGLIGSIIGILVGFWIINYGDSVTDYIQTFTYLPG ELGNELANLGWITLIASVVALIASLLIKSAPRGWGVILVIIGIVLFFVIGTAWIISGI LITLTGLMGIFRRPVPKSKY" misc_feature complement(1024857..>1025012) /locus_tag="lmo0994" /note="Protein of unknown function (DUF4064); Region: DUF4064; pfam13273" /db_xref="CDD:433076" regulatory complement(1025137..1025142) /regulatory_class="ribosome_binding_site" gene complement(1025159..1026190) /locus_tag="lmo0995" /db_xref="GeneID:986413" CDS complement(1025159..1026190) /locus_tag="lmo0995" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464520.1" /db_xref="GeneID:986413" /translation="MTQSALKRESYFDNAKFILIFLVVFGHFLQTFIADYAGVRVLYI YIYTFHMPAFVLISGFFAKSFGKPGYLKKTMKKLILPYVFFQLIYSIFYYFLLSKDNL SIQLLDPEWSLWFLLSLFFWNIMLFIFAKIKPWKSICIALFVGLVAGYFDIIGGYLSL SRTLVFFPFFLVGYFLKKEHFYYLKTHFVMILGGIFIVLLLSFITLHPNLNDKWFLGS KPYANFVEVKSLGLFIRALVYLISFGSIAAFFSFIPRKRLFFTKWGKNTLYVYLLHGF FIKFFREGSQTDFQYSPSTFLLLFVVTFVLTVLLSSRLVKIFVQPVIELRVSMLRDVF SRLTKRESY" misc_feature complement(1025363..1026181) /locus_tag="lmo0995" /note="Fucose 4-O-acetylase or related acetyltransferase [Carbohydrate transport and metabolism]; Region: NolL; COG3594" /db_xref="CDD:442813" regulatory complement(1026202..1026207) /regulatory_class="ribosome_binding_site" regulatory 1026361..1026366 /regulatory_class="ribosome_binding_site" gene 1026376..1026855 /locus_tag="lmo0996" /db_xref="GeneID:986513" CDS 1026376..1026855 /locus_tag="lmo0996" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="methylated-DNA-protein-cysteine methyltransferase" /protein_id="NP_464521.1" /db_xref="GeneID:986513" /translation="MLKRQKASPVGELFITIEDGCIMNISYDKPRNWELLDGNIIEKE LFQELMIQLASYFEGERENFDLPMLLKGTDFQKKVWQALSEIPYGAVVSYKDIAISAG SPKAVQAVGQANRANPIPIIIPCHRCVKSNGELGGYNGTDVDKKQYLLALEKGLSLS" misc_feature 1026394..1026852 /locus_tag="lmo0996" /note="DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase) [Replication, recombination and repair]; Region: AdaB; COG0350" /db_xref="CDD:440119" regulatory complement(1026827..1026863) /regulatory_class="terminator" regulatory 1026833..1026869 /regulatory_class="terminator" gene complement(1026871..1029045) /gene="clpE" /locus_tag="lmo0997" /db_xref="GeneID:986780" CDS complement(1026871..1029045) /gene="clpE" /locus_tag="lmo0997" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP-dependent protease" /protein_id="NP_464522.1" /db_xref="GeneID:986780" /translation="MNCEKCNQNPATIQLYMNINGKRVEMPLCASCYAEVRNQANFGS NEFPGASGSPFDDIFRQLSGAANQANREQRSQANAQVQTQTAGGGNGILDEFGTNLTD MAKNEQLDPVIGRDKEIKRVIEILNRRNKNNPVLIGEPGVGKTAVVEGLANAIVAGDV PSKLMNKEVILLDVASLVSGTGIRGQFEERMKQLIKELQERKNTILFIDEVHTIVGAG SAEGSMDAGNILKPALARGDLQMIGATTLKEYRTIEKDAALERRFQPVTVSEPSTKET LTILNGLKPKYEDFHEVVYSPEALTAAVELSARYIQDRHLPDKAIDLMDEVGSKYNLS IEKLDENTVSERVARLEDEKNQALQMEDYEKAAKVRDEITRLEENKTSNSFSERPVIQ ASDIQAIIEEKTGIPVGRLQEDEQSKMKNLERNLTGKVIGQEDAVKKVAKAIRRSRVG LKSKNRPIGSFLFVGPTGVGKTELGRTLARELFGTSEAMIRLDMSEFMEKHSISKLIG SPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRT VSFKDTVIIMTSNAGATDTEASVGFNTTTETKLEKGSDILAKLGAYFKPEFLNRLDSV IEFKSLEKDDLVQIIDLMLVDLNEMLAQEGVTIDVSKEVKEHLIDLGYDPKFGARPLR RTIQEHLEDTIADSLIDQPEAKNLVATLNDNKEITITEQVTA" misc_feature complement(<1028797..1029045) /gene="clpE" /locus_tag="lmo0997" /note="Protein-arginine kinase activator protein McsA [Posttranslational modification, protein turnover, chaperones]; Region: McsA; COG3880" /db_xref="CDD:443088" misc_feature complement(1026904..1028817) /gene="clpE" /locus_tag="lmo0997" /note="ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]; Region: ClpA; COG0542" /db_xref="CDD:440308" regulatory complement(1029055..1029060) /regulatory_class="ribosome_binding_site" regulatory complement(1029165..1029193) /regulatory_class="terminator" gene complement(1029208..1029819) /locus_tag="lmo0998" /db_xref="GeneID:986409" CDS complement(1029208..1029819) /locus_tag="lmo0998" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464523.1" /db_xref="GeneID:986409" /translation="MKSIKIDYKLVLGLVLCALLVILTYQFPRVFWYLYGAGMLFLLS FVIFNDDLKKEFSFVKGILPGIFSGIVLYIIFYIGAFIIKVMPGGLEHSVEAAFNKYS THSLIIWLLLIVAIIPGEEIFWRGFVLKRLNHYFNPWFSNVFAALLCMVMMFPSGNFA AIIGIFVASLVWNIMYSYRPSLLMLYLSHLTFAFLLLAALPIY" misc_feature complement(1029220..1029507) /locus_tag="lmo0998" /note="Membrane protease YdiL, CAAX protease family [Posttranslational modification, protein turnover, chaperones]; Region: YdiL; COG1266" /db_xref="CDD:440877" regulatory complement(1029831..1029836) /regulatory_class="ribosome_binding_site" regulatory 1029950..1029955 /regulatory_class="ribosome_binding_site" gene 1029965..1030756 /locus_tag="lmo0999" /db_xref="GeneID:986406" CDS 1029965..1030756 /locus_tag="lmo0999" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo0999" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464524.1" /db_xref="GeneID:986406" /translation="MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFT GVFAAVFFIMQYGKWLGSAITLLIFVVSTCIEWMQLSYTDEYIGSTLGGSVYGIPITM GFIWVGMVAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLY ITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIII AFFVFLSFYLDLWTSIAIIIVSNIIFTACYFFSLEKETQTKKKSE" regulatory 1030741..1030766 /regulatory_class="terminator" regulatory complement(1030744..1030772) /regulatory_class="terminator" gene complement(1030757..1032229) /locus_tag="lmo1000" /db_xref="GeneID:986831" CDS complement(1030757..1032229) /locus_tag="lmo1000" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phytoene dehydrogenase" /protein_id="NP_464525.1" /db_xref="GeneID:986831" /translation="MNLDSKKKIAIIGAGPGGLAAGMLLSQLGYQVNIYEKNDRIGGR TALHRMGKYSFDVGPSALTMTHVLTSLFMDCNRNILDYVSLLPINPIHTLYFKDITFP LYSDQSETKAVIQTYFPGEEDGFDRFMKENTKKMLYISPLNQFNYSSLFDFFRPTTLR AIPSLTLGRSLMDDLSRYFNSKYLRLAFSLQMRYLGMSPWDIPAAYSIIPFSEYYYGT FHPIGGQNKIVEAMQQVVTENKGKFFFNSEVTEFESNGKEITGAVLANGKTIEADYYF TNLDFIYSLTNEHPDKLDTKEYSSSAFILYLGLKTVLPFSHQSIIFPENYREFAHNTM HKKILSKDIAIHLTNPSATDNTMAPINHSSIRIMVPVPNNTSNIDWKKETPAFRQLVL ETVKERLEIPDLESQIEEEYIITPIDWEKKYHVKHGAIFGLQHLWRQHGYLHPSKKSP KFKNLFVIGAGAMSGSSLPFIIENAQIATQKFLQKEKKSE" misc_feature complement(1030763..1032163) /locus_tag="lmo1000" /note="Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism]; Region: COG1233" /db_xref="CDD:440846" regulatory complement(1032241..1032246) /regulatory_class="ribosome_binding_site" regulatory complement(1032254..1032310) /regulatory_class="terminator" gene complement(1032333..1032617) /locus_tag="lmo1001" /db_xref="GeneID:986350" CDS complement(1032333..1032617) /locus_tag="lmo1001" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464526.1" /db_xref="GeneID:986350" /translation="MHTFFFSKIEATPKIEGVITMAKAHVGDIIEFKDGLTGIVEKLN ENSVIVDLTYMENFKDLGIEEKTVVNHKNYQIIHSVEEDDEVENAEETEE" misc_feature complement(1032372..1032563) /locus_tag="lmo1001" /note="Uncharacterized conserved protein YkvS, DUF2187 family [Function unknown]; Region: YkvS; COG4873" /db_xref="CDD:443901" regulatory complement(1032626..1032631) /regulatory_class="ribosome_binding_site" regulatory 1032909..1032914 /regulatory_class="ribosome_binding_site" gene 1032924..1033190 /gene="ptsH" /locus_tag="lmo1002" /db_xref="GeneID:986517" CDS 1032924..1033190 /gene="ptsH" /locus_tag="lmo1002" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphocarrier protein HPr" /protein_id="NP_464527.1" /db_xref="GeneID:986517" /translation="MEQASFVVIDETGIHARPATLLVQAASKYSSDVQIEYTGKKVNL KSIMGVMSLGIGKGADITIYTEGSDEKEAIEGLTEVLKKEGLAE" misc_feature 1032924..1033187 /gene="ptsH" /locus_tag="lmo1002" /note="phosphocarrier protein HPr; Provisional; Region: PRK13780" /db_xref="CDD:237503" misc_feature order(1032963..1032965,1032969..1032974,1032978..1032983, 1032993..1032995,1033002..1033004,1033056..1033067, 1033074..1033079) /gene="ptsH" /locus_tag="lmo1002" /note="regulatory protein interface [polypeptide binding]; other site" /db_xref="CDD:238217" misc_feature 1032966..1032968 /gene="ptsH" /locus_tag="lmo1002" /note="active site" /db_xref="CDD:238217" misc_feature 1033059..1033061 /gene="ptsH" /locus_tag="lmo1002" /note="regulatory phosphorylation site [posttranslational modification]; other site" /db_xref="CDD:238217" regulatory 1033175..1033180 /regulatory_class="ribosome_binding_site" /gene="ptsH" /locus_tag="lmo1002" gene 1033190..1034908 /locus_tag="lmo1003" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986170" CDS 1033190..1034908 /locus_tag="lmo1003" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphotransferase system enzyme I" /protein_id="NP_464528.1" /db_xref="GeneID:986170" /translation="MAKELKGIAASDGIAIAKAYLLVEPDLSYEKTEVTDVESEVKRF ESALEVSRTELSMIREKAAKDLGEDKAQIFDAHLLVLNDPELTGPIEESIKNSKTNAE TALQETTDMFIGMFESMDNEYMRERAADIKDVRKRVLSHLLGVTIPNPALIDEEVVVV AADLTPSDTAQLNRNFVKGFVTDIGGRTSHSAIMARSLEIPAVVGTKEVTASVAKNDI VIIDGLEGNVIIHPTEEQIAHYEKIKSDFALQQAEWDKLKNEKTVSKDGVHVELAANI GTPNDLEGVISNGGEAVGLYRTEFLYMGRDNFPTEEEQFEAYKAVVSGMDGKSVVVRT LDIGGDKTLPYLELPEEMNPFLGFRAIRLCFANEELFRTQLRALLRASVYGNLKIMFP MIATVNEFRQARDILLDEKAKLKAAGTEVSDSIELGIMIEIPAAAVLADQFAKEVDFF SIGTNDLIQYTMAADRMNERVSYLYQPYNPSILRLVKMVIDASHKEGKWTGMCGEMAG DQTAVPLLLGLGLDEFSMSASSILKSRSLIKRLDQSEMVKLAEEALNKSTAEEVVELV EKYTAE" misc_feature 1033202..1034905 /locus_tag="lmo1003" /note="Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]; Region: PtsA; COG1080" /db_xref="CDD:440698" regulatory 1034921..1034947 /regulatory_class="terminator" regulatory 1035007..1035012 /regulatory_class="ribosome_binding_site" gene 1035021..1036055 /locus_tag="lmo1004" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986479" CDS 1035021..1036055 /locus_tag="lmo1004" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464529.1" /db_xref="GeneID:986479" /translation="MVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVY ATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLI IGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPR YNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANET ISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFH LFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKKVHMVLLGLLLLFFA FLAIIGVTFR" misc_feature 1035510..1035962 /locus_tag="lmo1004" /note="YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The...; Region: YdcF-like; cd06259" /db_xref="CDD:99750" misc_feature order(1035762..1035764,1035771..1035773,1035834..1035836, 1035846..1035848,1035855..1035857,1035948..1035950) /locus_tag="lmo1004" /note="putative active site [active]" /db_xref="CDD:99750" regulatory 1036054..1036059 /regulatory_class="ribosome_binding_site" gene 1036068..1036928 /locus_tag="lmo1005" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986400" CDS 1036068..1036928 /locus_tag="lmo1005" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="3-hydroxyisobutyrate dehydrogenase" /protein_id="NP_464530.1" /db_xref="GeneID:986400" /translation="MEKIGFVGTGVMGSSMAGHLLEAGYEVLVYTRTKTKAEDLLDKG ALWVETPGELANKVDILISMVGYPKDVEELYLGENGFLENLAVGTVAIDMTTSSPALA KKMAEFGREKGIGVLDAPVSGGDIGAKNGTLSIMVGGSEDVFLKVKPIFDILGSSVIL QGDAGAGQHTKMVNQIAIASNMIGVTEAIIYAEAAGLNPSRVLDSISGGAAGSWSLAN LIPRVLKDDFSPGFFIKHFIKDMGIAISEAKQMGLELPGLTLAEKMYQTLAEQGLSEE GTQALIKYYR" misc_feature 1036068..1036922 /locus_tag="lmo1005" /note="3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase [Lipid transport and metabolism]; Region: MmsB; COG2084" /db_xref="CDD:441687" regulatory 1036939..1036974 /regulatory_class="terminator" gene complement(1036971..1038116) /locus_tag="lmo1006" /db_xref="GeneID:986673" CDS complement(1036971..1038116) /locus_tag="lmo1006" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_464531.1" /db_xref="GeneID:986673" /translation="MTKSIRPELRDIQVSGIRTFNTRVTGIPDMIRLTLGEPDFPTPD HVKQAAISAIEENFTNYTPNAGMPELLEAASIYFHEKYDLSYSNKEIIVTVGATEAIS VALQTILEPGDEVILPDPIYPGYEPLITLNKAHPVKVDTTETNFKLTPEQLKAHITPK TKALIIPYPSNPTGVTLSKDELSALAEVLKETGIFVIADEIYSELTYHEEHVSIAPML RDQTIVINGLSKSHAMIGWRIGFLLAPEILTQEMLKIHQYSVTCASSISQKAALEAIT NGKDDAFQMRTEYKTRANFTQDRLEKMGFTVIPPDGAFYFFVKLPDEIAENSFDWAVK LAEEAKVAVVPGNAFSEKGDRYFRLSYATSFNNLAEALDRMAQFVEK" misc_feature complement(1036974..1038116) /locus_tag="lmo1006" /note="aminotransferase A; Validated; Region: PRK07683" /db_xref="CDD:236075" regulatory complement(1038123..1038129) /regulatory_class="ribosome_binding_site" regulatory 1038321..1038326 /regulatory_class="ribosome_binding_site" gene 1038336..1038557 /locus_tag="lmo1007" /db_xref="GeneID:986404" CDS 1038336..1038557 /locus_tag="lmo1007" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1007" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464532.1" /db_xref="GeneID:986404" /translation="MTKPGKYEALFFPTKDGLLKIHAYGFNPCGSWGEVFATIGDQTI CVKGFNRHKTIVRATKMIISATANRKNEF" regulatory 1038566..1038608 /regulatory_class="terminator" regulatory 1038850..1038855 /regulatory_class="ribosome_binding_site" gene 1038863..1039096 /locus_tag="lmo1008" /db_xref="GeneID:986444" CDS 1038863..1039096 /locus_tag="lmo1008" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464533.1" /db_xref="GeneID:986444" /translation="MSQLLGIIQRLHAMQEDESAETQARRFEKNGTPVCEVKFFQASN SFEVEIYGDNSKYQFDDIDMTAIEIFETLQENE" misc_feature 1038866..1039084 /locus_tag="lmo1008" /note="Uncharacterized conserved protein YkuJ, DUF1797 family [Function unknown]; Region: YkuJ; COG4703" /db_xref="CDD:443738" regulatory 1039135..1039167 /regulatory_class="terminator" regulatory 1039284..1039289 /regulatory_class="ribosome_binding_site" gene 1039297..1039749 /locus_tag="lmo1009" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986412" CDS 1039297..1039749 /locus_tag="lmo1009" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464534.1" /db_xref="GeneID:986412" /translation="MISNRFGQFIDNELADSMISAEKVAHVQLGNNLEHALLVLTKCG YSVIPVLDFEFKLHGLISAAMITDAILGLERIEFERLEDLKVEDVMQTDFPVIKDFNN NERIVHLLVDHPFVCVVDSDHHFEGIVTRRVVLKQVNRYIHLQVEENR" misc_feature 1039312..1039725 /locus_tag="lmo1009" /note="cyclic-di-AMP-binding protein CbpB; Region: CBS_CbpB; NF041630" /db_xref="CDD:469514" regulatory 1039733..1039738 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1009" gene 1039746..1040624 /locus_tag="lmo1010" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986367" CDS 1039746..1040624 /locus_tag="lmo1010" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="NP_464535.1" /db_xref="GeneID:986367" /translation="MIVTEYELLVCLAEELNMRKSAEKLFLSQPALSQRLQTIESRWN TKIFIRTQKGLLLTPEGEAIVRHASSVIEREHTIQEKLEAMEGVVRGTLRIACASVVA QMWLPRVLKAFSRAYPNVQISLVTGWSSEVTQQLAAGNVHIGIVRGSSTWKSVQKPLF NDKLILVDTEITKIEEVFQTNRPFIQFRSDSNYYQVIQDYWQRNFGKMPRQAMLMDQM ETSRQMALNGIGFAILPEVTMLGYTDKINKIPLTEKDGSILSRETNLLTYEQSLSLPQ VKAFLEITDKFLEQVK" misc_feature 1039764..1040594 /locus_tag="lmo1010" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" regulatory 1040657..1040662 /regulatory_class="ribosome_binding_site" gene 1040672..1041382 /locus_tag="lmo1011" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986298" CDS 1040672..1041382 /locus_tag="lmo1011" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="tetrahydrodipicolinate succinylase" /protein_id="NP_464536.1" /db_xref="GeneID:986298" /translation="MEQMDAHQIISFIQNSKKATPVKVYLKGDLEKIDFPSDVKTFIT GNAGTVFGEWAVVEPLLEANKANIEDYVIENDRRNSAIPLLDMKNINARIEPGAVIRD QVTIGDNAVIMMGASINIGSVIGDGTMIDMNVVLGGRATVGKNCHIGAGSVLAGVVEP PSAQPVIVEDNVVVGANVVVLEGVRIGEGAVVAAGAIVTKDVAPGTVVAGIPARELKK LDAKTASKTEIMQELRQL" misc_feature 1040687..1041379 /locus_tag="lmo1011" /note="Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes...; Region: LbetaH; cl00160" /db_xref="CDD:469633" misc_feature order(1041056..1041058,1041062..1041064,1041074..1041076, 1041080..1041082,1041110..1041112,1041128..1041130, 1041134..1041136,1041188..1041190,1041203..1041208, 1041212..1041214,1041242..1041244,1041254..1041256, 1041260..1041262,1041266..1041268) /locus_tag="lmo1011" /note="putative trimer interface [polypeptide binding]; other site" /db_xref="CDD:100041" misc_feature order(1041188..1041190,1041194..1041199,1041212..1041214, 1041248..1041250,1041266..1041268) /locus_tag="lmo1011" /note="putative CoA binding site [chemical binding]; other site" /db_xref="CDD:100041" regulatory 1041432..1041437 /regulatory_class="ribosome_binding_site" gene 1041446..1042561 /locus_tag="lmo1012" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986510" CDS 1041446..1042561 /locus_tag="lmo1012" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="N-acyl-L-amino acid amidohydrolase" /protein_id="NP_464537.1" /db_xref="GeneID:986510" /translation="MLNEFIAIRRELHQIPETGYKELKTQAYLLDYISKLPSGHLEVK KWRTGILVLVKGTNPEKTIGYRTDIDALPITEETELPFASKHPGNMHACGHDLHMSIA LGVLTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESTEFAEWRPDSIYGLHIAPEYKV GEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDP MDSAVITIGRIHGGEIQNVIAETAYLDGTIRTLSPETMEIVWTRLKQLAKGWEEAYQC EVEFHPGSDYYQVDNDPVETEEFIHFLEEQYPESYVPARSAMTGEDFGYFLSEIKGFM FWLGVDSEYSLHHAKLNPKEEAIPFAIDVLIHFLESK" misc_feature 1041455..1042552 /locus_tag="lmo1012" /note="M20 Peptidase aminoacyclase-1 YkuR-like proteins, including YkuR and Ama/HipO/HyuC proteins; Region: M20_Acy1_YkuR-like; cd05670" /db_xref="CDD:349920" misc_feature order(1041971..1041973,1042037..1042042,1042052..1042054, 1042061..1042063,1042070..1042072,1042121..1042141, 1042151..1042156,1042160..1042162,1042178..1042186) /locus_tag="lmo1012" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:349920" regulatory complement(1042554..1042601) /regulatory_class="terminator" regulatory 1042565..1042612 /regulatory_class="terminator" gene complement(1042605..1043450) /locus_tag="lmo1013" /db_xref="GeneID:986362" CDS complement(1042605..1043450) /locus_tag="lmo1013" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464538.1" /db_xref="GeneID:986362" /translation="MNLLKKWFSSIDWDQFWNHIISVGIKIAILIALYFIFRVIGNKI IRSFFRKYRQQQAVSVGRADTLESLISNFYGYVLFFTFAILLLQNFMDVTAIIASAGV ASLAIAFGAQGLVSDVVTGFFILLERQLDVGDTITIGLVNGTVEALGLRTTQVRDFDG TLHFIPNRQIMVVSNHSRGNMRVMVDIQISPHEDPEKAIKIIGEVCDVAAKENKNIVE PPVVLGVQNIDATNMIIRVVGKAVNGEQYSVQRDLLKDIREALAENKIELPLNFVSTF GPNNN" misc_feature complement(1042641..1043450) /locus_tag="lmo1013" /note="Small-conductance mechanosensitive channel [Cell wall/membrane/envelope biogenesis]; Region: MscS; COG0668" /db_xref="CDD:440432" regulatory complement(1043462..1043467) /regulatory_class="ribosome_binding_site" regulatory 1043807..1043812 /regulatory_class="ribosome_binding_site" gene 1043821..1045014 /gene="gbuA" /locus_tag="lmo1014" /db_xref="GeneID:986360" CDS 1043821..1045014 /gene="gbuA" /locus_tag="lmo1014" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycine/betaine ABC transporter ATP-binding protein" /protein_id="NP_464539.1" /db_xref="GeneID:986360" /translation="MSKIKVEELTKIFGKKASKASSLLSQGKSKTDILKETGATIGVN KASFSVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTSGKIWLDGKELSSLNKKELLEV RRKSMSMVFQNFGLFPNRTINRNVEYGLEIQGMDKEEREKNAAESLALVGLAGYGDQY PSQLSGGMQQRVGLARALANNPDILLMDEAFSALDPLNRKDMQDQLLDLQDKMKKTII FITHDLDEALRIGDHIMIMRDGSVVQTGSPEEILAHPANEYVEKFIEDVDRSKVYTAS NVMIRPEIVNFEKDGPRVALKRMREAGTSSVFVVKRNRELVGIVHAAEVSKLVKENIT SLETALHRDVPTTGLDTPLAEIMDTISTTTIPIAVTEDGKLKGIIIRGSVLAALSGNE VNVNA" misc_feature 1043821..1044987 /gene="gbuA" /locus_tag="lmo1014" /note="ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]; Region: ProV; COG4175" /db_xref="CDD:443334" regulatory 1044992..1044997 /regulatory_class="ribosome_binding_site" /gene="gbuA" /locus_tag="lmo1014" gene 1045007..1045855 /gene="gbuB" /locus_tag="lmo1015" /db_xref="GeneID:985002" CDS 1045007..1045855 /gene="gbuB" /locus_tag="lmo1015" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycine/betaine ABC transporter permease" /protein_id="NP_464540.1" /db_xref="GeneID:985002" /translation="MPNIPTIPLASWIDKLVDGLTQFEGFFNVITNIIGGIVDAFQWV FDLVPPWLFIILLVFGTFWVNRKGKKWGLIIFEVVGLLLIWNLDFWRDMTQTLTLVLT SSLIALVIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVV ASVIFAMPPTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQ SIMLALSMVVIASMIGAMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRLTQAFN KKAKSE" misc_feature 1045007..1045834 /gene="gbuB" /locus_tag="lmo1015" /note="ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism]; Region: ProW; COG4176" /db_xref="CDD:443335" regulatory 1045855..1045860 /regulatory_class="ribosome_binding_site" gene 1045869..1046771 /gene="gbuC" /locus_tag="lmo1016" /db_xref="GeneID:986358" CDS 1045869..1046771 /gene="gbuC" /locus_tag="lmo1016" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycine/betaine ABC transporter substrate-binding protein" /protein_id="NP_464541.1" /db_xref="GeneID:986358" /translation="MLKKLITTAVLAMLIFTLAACGTTLAPYDAKKDLGEQINYTITG IDAGAGIMLATQNAIKDYHLDDDNWQLQTSSTAAMTSTLQKAMKDKRPIVVTGWTPHW MFTKFDLKFLDDPKNVYGNAENIHTIVRKGLKEDKPSAYQVLDNFFWTAEDMSEVMLE VNDGVDPEEAAKKWIKNNPDKVAKWTDGVEKVDGDEIKLTYVAWDSEIASTNVVAEAL KQVGYKPTIQAMEIQPMWASVATDAADGMVAAWLPNTSGIYYKDYKGKFEDLGPNLKG AKIGLAVPKYMTNINSIEDLKTSK" misc_feature <1045962..1046426 /gene="gbuC" /locus_tag="lmo1016" /note="Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold; Region: PBP2_OpuAC_like; cd13639" /db_xref="CDD:270357" misc_feature 1046454..>1046768 /gene="gbuC" /locus_tag="lmo1016" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" regulatory 1046783..1046836 /regulatory_class="terminator" regulatory 1046873..1046878 /regulatory_class="ribosome_binding_site" gene 1046886..1047377 /locus_tag="lmo1017" /db_xref="GeneID:986356" CDS 1046886..1047377 /locus_tag="lmo1017" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS glucose transporter subunit IIA" /protein_id="NP_464542.1" /db_xref="GeneID:986356" /translation="MFKKFLKKSKQEVLFAHVTGQVIALEDVPDPVFNQKMMGEGIAI KPETGTIVAPIDGKIIQLAETKHAFGIRTDMGQEILVHIGLETVSLNGEGFNVLVSVG DKVKVGDPIVEADFDFIEKNAASTVVPMVITNSSEGKYDFDFHAVPKAEAGKTEVITT NLK" misc_feature 1046904..1047350 /locus_tag="lmo1017" /note="Phosphotransferase system IIA component [Carbohydrate transport and metabolism]; Region: NagE; COG2190" /db_xref="CDD:441793" regulatory 1047389..1047429 /regulatory_class="terminator" regulatory 1047476..1047481 /regulatory_class="ribosome_binding_site" gene 1047490..1048185 /locus_tag="lmo1018" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986357" CDS 1047490..1048185 /locus_tag="lmo1018" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="copper homeostasis protein CutC" /protein_id="NP_464543.1" /db_xref="GeneID:986357" /translation="MLEVIVQNPRDAYLAEKYGANRMEVVSAISEGGLTPSYGAIKEI VRASKLPAMMMIRPHSFSFVYDEAAKIVMERDIELAKEVGVQGIVYGGITENGAIDQA LLEKVIEWKGDLNLTFHRALEATKDIEASYQVLRTYGKDINQLLTSGGTANALDSLPR LKRWIQDSEAQPDSFQVLVGSGVKPENIATFQATLNHSDYHVGSAAREANDFSKDILK EKIDILQQQINKD" misc_feature 1047490..1048131 /locus_tag="lmo1018" /note="Copper homeostasis protein CutC [Inorganic ion transport and metabolism]; Region: CutC; COG3142" /db_xref="CDD:442376" regulatory 1048253..1048258 /regulatory_class="ribosome_binding_site" gene 1048266..1049138 /locus_tag="lmo1019" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986368" CDS 1048266..1049138 /locus_tag="lmo1019" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464544.1" /db_xref="GeneID:986368" /translation="MNNYIGKSQVMTVKEIKDTGWLLEKDGVTVFLSKSNTHETELAV GAEVTVFIFVDYDREIAATTIIPKIQVGHYGWGTVTEVRKHLGVFVDIGIEKDVVVSL DDLPALPHLWPKKEDRMMIALRVDEENRVWGVLAEEEQFRAIAVRAEQDLFNQNVEGT IYRLLKVGSFVFTDDFHIGFIHESERTSEPRMGERVKARVIAVKPDGSLNLSLRGRAH EVLNDDAEMILTYLRSVGGEMPFGDKSDPDAIRAKFGISKAQFKRAIGTLLKARRITQ ENGVVTKITEETSD" misc_feature 1048302..1049102 /locus_tag="lmo1019" /note="Predicted RNA-binding protein YitL, contains S1 domains, virulence factor B family [General function prediction only]; Region: CvfB; COG2996" /db_xref="CDD:442235" regulatory 1049258..1049263 /regulatory_class="ribosome_binding_site" gene 1049273..1049986 /locus_tag="lmo1020" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986352" CDS 1049273..1049986 /locus_tag="lmo1020" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464545.1" /db_xref="GeneID:986352" /translation="MKKMESSVVFVFLIAIIVGVGLEMLFQWELLILFALGIFFIFTS RKASATKKSARNSLFIGIVFIIIAVLLTTTFKVGLVVAGIYAIIHYISRKRAPQLLML KTREPDSKIDRTDKFIRNQWFGNQRILDVVYEWDDINIQTGIGDTILDLGNTVLPTGE SVIMIRSVSGKIRILVPFDIGICIEHSAIFGNIQYDKESTSIQNNSIKVYSDNYESSA RKVKIMTSVIFGDLEVIRL" misc_feature 1049300..1049980 /locus_tag="lmo1020" /note="Membrane protein LiaF, inhibitor of the LiaRS two-component envelope stress sensory system [Signal transduction mechanisms]; Region: LiaF; COG4758" /db_xref="CDD:443791" regulatory 1049970..1049975 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1020" gene 1049983..1051041 /locus_tag="lmo1021" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985411" CDS 1049983..1051041 /locus_tag="lmo1021" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component sensor histidine kinase" /protein_id="NP_464546.1" /db_xref="GeneID:985411" /translation="MSFSKLMMAVCSGLLLVATAIGTVGYYFFSEGSWYKILIEQKIF YIPFVVFVPLTAISIGLIIGGLIGYFVKQKFESIDFSIRLLGQGDLEKKITSEEDENF LEVQQVYKQIDRLRDKMKAQTILTQKLASDRAESTGQTKEAILSEERHRIARELHDSV SQQLFAAMMLLSALNEQSEKSATPAMQKQLKMVESIVNESQSEMRALLLHLRPTQLEG KSLKTGIEQLLKELTTKLPIEVEWQIEDISLQKGIEDHLFRIVQELLSNTLRHSKAKL LEVRLVTMDNLAVMKVVDDGVGFDMDNVRQGSYGLQNMRERVAEFGGTIKIISFPGRG TSVEIKIPLVAKKDVESE" misc_feature 1050406..1051020 /locus_tag="lmo1021" /note="Signal transduction histidine kinase ComP [Signal transduction mechanisms]; Region: ComP; COG4585" /db_xref="CDD:443642" regulatory 1051022..1051027 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1021" gene 1051038..1051676 /locus_tag="lmo1022" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986610" CDS 1051038..1051676 /locus_tag="lmo1022" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_464547.1" /db_xref="GeneID:986610" /translation="MIKVLLVDDHEMVRIGVSAYLSVQDDMEVVGEAENGREGADMAL ELRPDIILMDLVMDEMDGIEATKEIMQNWKEAKIIIVTSFIDDEKVYPALEAGASSYM LKTSTASEIADAIRATYGGDSVLEPEVTGKMMQRLTAKPEKNLHDDLTNRENEILLLI AEGKSNQEIADELFITLKTVKTHVSNILSKLDVQDRTQAAIYAFKHDLVEKK" misc_feature 1051047..1051658 /locus_tag="lmo1022" /note="transcriptional regulator NarL; Provisional; Region: PRK10651" /db_xref="CDD:182619" regulatory 1051679..1051684 /regulatory_class="ribosome_binding_site" gene 1051695..1052354 /locus_tag="lmo1023" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985239" CDS 1051695..1052354 /locus_tag="lmo1023" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="potassium transporter" /protein_id="NP_464548.1" /db_xref="GeneID:985239" /translation="MKEGFAVIGLGRFGGSICRSLVEQGMEVLAIDSDEERVNEYMSI ATHAVIANSTDENALRQLGIRNFEHVIVAIGEDIQSSILTTLILKEMGVKYVTAKATN DKHAKLLDKIGADRVVHPERDMGRRIAHYIVSKNMLDYLELSDEYSLVEISVSDPRFL GKSLVDLDFRNSFGVNIVGIKKDKQMIITPEANDVLHEGDILIVIGSDDDIERLQEKI Q" misc_feature <1051707..1052303 /locus_tag="lmo1023" /note="Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms]; Region: TrkA; COG0569" /db_xref="CDD:440335" regulatory 1052495..1052500 /regulatory_class="ribosome_binding_site" gene 1052509..1053429 /locus_tag="lmo1024" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986351" CDS 1052509..1053429 /locus_tag="lmo1024" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1024" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464549.1" /db_xref="GeneID:986351" /translation="MKKFLLDKIGARGLIQMLQAFIYASICVVVHTVIFPDLAGVLPI VVLIGIISMQPTYGITRKVIPQIALAFTLACVFVIISTYFFPINVYIYYVVMIVVILA VNFLMPQKYMVMTLAIGTALYFLGTDDLPMPLYAMIIVALMDVFVFFLLVQLVVKYVH LPLEKTVQTIMKQLVGLFDKEIESVFKNNGKFIAKPLYSIFVQSQMFIKEYSASKKAN PRHVELYQALLPNYLQLFFHMQTMEDIGRVGLSEEAKQALAQINVKVSDEINVKEADP VASFHVKKFVENFLAVKVGMNELVEGRGQK" regulatory 1053414..1053419 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1024" gene 1053426..1054277 /locus_tag="lmo1025" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986700" CDS 1053426..1054277 /locus_tag="lmo1025" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1025" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464550.1" /db_xref="GeneID:986700" /translation="MKKISMRERFALDPRVAKVLISITIAVILFPVMGDWIVYPTYVF NAIYITAQMSKGDTYKSSIERIIGTIVGGLLAAFVYLLVPNHHYIMIPIGAALAVMLS YLFTKKFTMVIVVITVMVLVGKGDGEPIVFLRDRLFDTMIGLVIGFVVYALYPRKKNK KLNQVFISQEKAVLERIKEIDINSEDAKSLAPKIKGLWKQLIDLRKTREQIITDSSFV ASLTSDEPMLHFTHLVEQAINNIEILYHVTLEKESEPDYEVVFAYHQQACAKVITEMD ALITKHK" misc_feature 1053426..1053992 /locus_tag="lmo1025" /note="Uncharacterized membrane protein YgaE, UPF0421/DUF939 family [Function unknown]; Region: YgaE; COG4129" /db_xref="CDD:443305" regulatory complement(1054271..1054313) /regulatory_class="terminator" regulatory 1054282..1054324 /regulatory_class="terminator" gene complement(1054319..1055284) /locus_tag="lmo1026" /db_xref="GeneID:986902" CDS complement(1054319..1055284) /locus_tag="lmo1026" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LytR protein" /protein_id="NP_464551.1" /db_xref="GeneID:986902" /translation="MTETRTEKKKKTTSTFTKVMKIASVALLGIIFFSITGLAAKYYI TVQNTFSKINVPLESSNKTLSDLEKKKPFSVLLMGSDARAGEKNGRADTIILATANKQ QNAVEMVSIPRDTKVDYGNGDIGKINASYSNGGPSGTVSAVEKLMPGVPVDYFISINM EGFKDLVDAVGGITVYNDIDLTEVNSKFVKGNITLNGTEALQYVRIRHEDPRGDFGRQ DRQRDVIIGIANKVISSSGVSNFESIMKAVGDNFQTNMTLTDITSMAANYSSVLKNVD SQELKGEGEMIYSESYGFDLYYFAPDKTDLERIITMFKKSLDITE" misc_feature complement(1054325..1055212) /locus_tag="lmo1026" /note="LytR_cpsA_psr family; Region: LytR_cpsA_psr; cl00581" /db_xref="CDD:469829" regulatory complement(1055293..1055298) /regulatory_class="ribosome_binding_site" regulatory complement(1055345..1055383) /regulatory_class="terminator" gene complement(1055393..1057060) /locus_tag="lmo1027" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986344" CDS complement(1055393..1057060) /locus_tag="lmo1027" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464552.1" /db_xref="GeneID:986344" /translation="MKFVKNNETAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPE DELLGIDYVIPDYSYLVKNKDKIKGLFITHGHEDHIGGVPYLLRDLNIPIYAGKLASA LIRNKLEEHGLLRQTKIYEYEEDDVFKFRKTSISFFRTTHSIPDTYGIVVKTPSGNIV HTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNAEVPNFTMSERVVGESIKNI FRDVEGRIIFATFASNIYRLQQVVESSIETGRKIAVFGRSMESAMEIGKQLGYIQAPK DTFIDVHQLNKTPAGNVTILCTGSQGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPI PGNTTSVNRTINLLYQAGAEVIHGKVNNIHTSGHGGQQEQKLMLRLMKPKFFMPIHGE FRMQKIHAESAEECGVPEENSFIMANGDVLALTSETAHVAGKIHAASVYIDGSGIGDI GNIVLRDRRILSEEGLVIVVVSIDMKNSRVMAGPDIISRGFIYMRESGNLIGEAQGLL TRHLNKVMEQKTTQWSEIKNEITDTLQPFLYEKTKRRPMILPIIMEV" misc_feature complement(1055396..1057048) /locus_tag="lmo1027" /note="mRNA degradation ribonuclease J1/J2 [Translation, ribosomal structure and biogenesis]; Region: RnjA; COG0595" /db_xref="CDD:440360" gene complement(1057067..1057276) /locus_tag="lmo1028" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986595" CDS complement(1057067..1057276) /locus_tag="lmo1028" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464553.1" /db_xref="GeneID:986595" /translation="MIFKVFYQETLTETPVREKTQSLYVEAESEVKVRQLLKDEPFHI EFVEKISDAHLAYEKENPDFALWEK" misc_feature complement(1057073..1057276) /locus_tag="lmo1028" /note="DNA-dependent RNA polymerase auxiliary subunit epsilon [Transcription, Defense mechanisms]; Region: RpoEps; COG5503" /db_xref="CDD:444254" regulatory complement(1057072..1057077) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1028" regulatory complement(1057284..1057289) /regulatory_class="ribosome_binding_site" regulatory 1057745..1057750 /regulatory_class="ribosome_binding_site" gene 1057761..1058531 /locus_tag="lmo1029" /db_xref="GeneID:986340" CDS 1057761..1058531 /locus_tag="lmo1029" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464554.1" /db_xref="GeneID:986340" /translation="MSKIVFFDVDGTLVGETKEIPASAKQAIAKLKENGVYVAIATGR GPFMLDEIRKELDINSYICYNGQYVIFEGKEIYAKPLPTESLERLITVASEHEHPIVF SGKDSMRANLPDHDRVTIGMNSIKREYPKVDANYYKGRDIYQCLLFCDESYDAYYREE FKQYGFLRWHDVSVDVCPADGSKAEGIKQMIKKLGFSMKDTYAFGDGLNDIAMLQTVG TGVAMGNGRDEVKAVADYVTSHVDDDGVYNALKQLKLI" misc_feature 1057767..1058522 /locus_tag="lmo1029" /note="phosphatase, similar to Bacteroides thetaiotaomicron VPI-5482 BT4131 hexose phosphate phosphatase; belongs to the haloacid dehalogenase-like superfamily; Region: HAD_HPP; cd07517" /db_xref="CDD:319819" misc_feature order(1057782..1057796,1057884..1057892,1058307..1058309, 1058373..1058378,1058385..1058390) /locus_tag="lmo1029" /note="active site" /db_xref="CDD:319819" regulatory complement(1058534..1058571) /regulatory_class="terminator" regulatory 1058545..1058582 /regulatory_class="terminator" gene complement(1058580..1059608) /locus_tag="lmo1030" /db_xref="GeneID:986852" CDS complement(1058580..1059608) /locus_tag="lmo1030" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="NP_464555.1" /db_xref="GeneID:986852" /translation="MKLEDIARLANVSKSAVSLALNGKAGVSEETRLHILQIVEENNY VPLRNTNKKMKKKSTIRFIACKSPNLITEQYQNLPFFSELLSYLSAEIASYPYDLVIS TFDATTILEELAEAEKEQPTAGLILLGTNLNAEEINRIQQEYPKIVVLDTHHPHISAN FVSINNFLGGYKAADYLLQLSHTKIGYVMGLPRIKNFDERKSGFFARLEEADISVPEE HVFHLSAMQIQEEASVKEAIAELQDLPSALFCENDYMAISMIKMLQSLSIKVPEQVSV LGFDNINESKVITPELTTVHVKKRDIAEQTLALLSKQIKADTNFETRQIQVNTSLIER TSCVPFQK" misc_feature complement(1058592..1059608) /locus_tag="lmo1030" /note="DNA-binding transcriptional regulator, LacI/PurR family [Transcription]; Region: PurR; COG1609" /db_xref="CDD:441217" regulatory complement(1059617..1059622) /regulatory_class="ribosome_binding_site" regulatory 1059859..1059864 /regulatory_class="ribosome_binding_site" gene 1059872..1061275 /locus_tag="lmo1031" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986327" CDS 1059872..1061275 /locus_tag="lmo1031" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464556.1" /db_xref="GeneID:986327" /translation="MEAIKIGFAPTRRSIFSAPDAIKYANLTRDKLNELNIEFVDITE FNEDGLLYDDADVMKIAAKFKKAGIQGLFLPHTNFGTEYVCARLAKELDVPVLLWGPR DERPDENGIRLRDTQCGLFATGKILRRFQVPFTYMTNCRLSDPEFERGIRDFIAVCNT VKTFQNMRILQIGPRPFDFWTTMCNEGELLEKFNVQLAPIPLPELMKEIRSVSSEQIE EVDGTVEYCHGCAIVKIKEVDLRMVAALKVAMKNLATKYGCSAIAIQCWTALQDEIGI MPCAANAMLIDEGIPVVCETDIHGAISCLLIEAANLGRNKSFFADWTVRHPDNENGEL LQHCGLFPFSVAKDKPAIGYPLAFDSPGAVEAEAKGGELTLCRFDGDNGEYSLLLGKA RGIEGPYTKGTYLWIEVDNLKRLEEKIVSGPYIHHVSGIHADVVPILYETCKYIGIKP DLYDPIEEDIKAYLRGE" misc_feature 1059881..1061260 /locus_tag="lmo1031" /note="L-fucose isomerase or related protein [Carbohydrate transport and metabolism]; Region: FucI; COG2407" /db_xref="CDD:441963" regulatory 1061280..1061285 /regulatory_class="ribosome_binding_site" gene 1061291..1062115 /locus_tag="lmo1032" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986336" CDS 1061291..1062115 /locus_tag="lmo1032" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transketolase" /protein_id="NP_464557.1" /db_xref="GeneID:986336" /translation="MSELKLKSFEIRKDVLKMIYDAKTGHTGSDLSCADILVALCYGV LNVNPENPEALDRDRYVQSKGHAVEVLWAVLADKGFFAKEELADFSAFGSRIIGHPNN KVAGIEMNTGSLGHGLSVSVGMALAAKMDGKSYHTYTLMGDGELAEGSVWEGAMAAAN YKLDNLTAIIDRNSLQISGRTEDVMSVEPLADKWRAFGWDVIEADGNNPDKLQAIFKT VNETGKPRLIIAKTIKGYGVKMAENVAKWHHYVPSSEEYEIAMKDLEERMEACRHE" misc_feature 1061291..1062100 /locus_tag="lmo1032" /note="Transketolase, N-terminal subunit [Carbohydrate transport and metabolism]; Region: TktA1; COG3959" /db_xref="CDD:443159" regulatory 1062093..1062098 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1032" gene 1062108..1063064 /locus_tag="lmo1033" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986331" CDS 1062108..1063064 /locus_tag="lmo1033" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transketolase" /protein_id="NP_464558.1" /db_xref="GeneID:986331" /translation="MNKIANRQVMCEVLMKEATRNDSNLVVLTSDSRGSASLGAFAEK FPERLIETGIAEQNIVGIAAGLAHSGKRAFVASPACFLSMRSIEQVKVDVAYSDTNVK LIGISGGVSYGALGMSHHSLQDIAVTRAIPNLEVILPADRLETEAIFDYLLQSNRPAY VRLGRNAVEDCYAEKPVFQIGKAGTLREGNDVSILATGEMVRVALDASEELKLKGISA RVLNFSTIKPFDQEVVKAALTETKLLISIEEHSIYGGLGAAVSEVVSSSPTSIRHLIL GIPDEPAIAGTSQEIFDYYGLSATGIVATIMKNLPIIGDERR" misc_feature 1062108..1063037 /locus_tag="lmo1033" /note="Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]; Region: TktA2; COG3958" /db_xref="CDD:443158" regulatory 1063046..1063051 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1033" gene 1063061..1064524 /locus_tag="lmo1034" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986330" CDS 1063061..1064524 /locus_tag="lmo1034" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycerol kinase" /protein_id="NP_464559.1" /db_xref="GeneID:986330" /translation="MKKHYQIAIDQSTSGTKVLLFKEGKLVDRLDKKHRQLYPKKGWV EHNPIEICQNVRTLIADILTKHDLITADIERLALTNQRETIVAWDKQTGKPLYNAIVW QCNRTKEICETLKEAGYEKRIKQLTGLKIDSYFSASKMMWLLENISAVRDAASRNQLA FGTMDAWLLFSLTDDSNYFTDRTNASRTLLYDIEKNDWSDELLELFGVKRAYLPEVKQ SAGSFGSYQEIPIHSVMADSEAALYGQGCDTFGAVKATLGTGCSVMMQIGENRLPEND AILTTLAWDVAGVNQFALEGIIRSCGDTLVFLSEQLELFNDYDTACKRAFQLPCNEGV VLIPGQLGLGAPYWNTDIRAEILGLTREHTKWHIIRAGFTSIAFQIKAVIDQMELMIG QNIKRLQVDGGLTKQHELMQYLADVLKAEVAVSPAEELSAIGAIEIADNNLQNKRTIA KLYQPSITHTHALEDFQEWEKQVKSSILKIQKVRNFK" misc_feature 1063073..1064482 /locus_tag="lmo1034" /note="nucleotide-binding domain (NBD) of glycerol kinase (GK) and similar proteins; Region: ASKHA_NBD_FGGY_GK; cd07769" /db_xref="CDD:466789" regulatory 1064507..1064512 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1034" gene 1064521..1066377 /locus_tag="lmo1035" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985245" CDS 1064521..1066377 /locus_tag="lmo1035" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS beta-glucoside transporter subunit IIABC" /protein_id="NP_464560.1" /db_xref="GeneID:985245" /translation="MNNSDLAKEVVKLVGGKENILSVIHCVTRLRFKLRDENLAETEK IKALKGVMTVVKSGGQYQVVIGDHVSYVYDEVIRVLGIKPDDALQDNPEQEHKSIFNK FVELISGIFMPVLGLLAASGILKGFLTAAVTMGLINTSAGVYEVLYAASDALFYFMPI ILGFSAGKVFKTNQYLSAAVGAALVYPTLVDMYSSGAHLTFLHIPVILMNYTMSVIPV ILAIYFMSKLEKVLVKFIPKSLQLIFVPLLLLLIVVPVSLIIIGPVSTYASQLLAKGA LGLYSLSPMIAGFFLAGVWQVAVMFGLHWAFIPIFINNISVLGYDPINAMLYCTVFAQ TGAVMAVMLKTRNQELRSLSITATISGFLGITEPAIYGVNLPYKKPFIMACVGSAFGG AIAGMSAAKMFGGFASGGIFGIPMFINPDGIGWDFWGFLISLVVAFSVALILTYFFGF KDKVEEVVIQTGEKATLDETIYSPLQGELIALNDVKDEVFSAGIMGAGVAILPASGEI RAPFDGTVLSVFQTKHAIGLISKQGVELLIHVGLDTVNLNGQFFDIEVSESEEIKKGD LLGTFELDTIKKAGYDITTPIIVTNSATLADVITVNLGKHVDNNQKILEAKA" misc_feature 1064527..1066371 /locus_tag="lmo1035" /note="PTS system, beta-glucoside-specific IIABC component; Region: PTS-II-ABC-beta; TIGR01995" /db_xref="CDD:273919" regulatory 1066385..1066390 /regulatory_class="ribosome_binding_site" gene 1066397..1067662 /locus_tag="lmo1036" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984797" CDS 1066397..1067662 /locus_tag="lmo1036" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1036" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464561.1" /db_xref="GeneID:984797" /translation="MLKQSADKRRIEKNDKPFFYLADTVWSAFTNIDLTDWAYYLKVR KEQGFNVLQINILPQWDRSVLKKIQEPFGINEGFFDLKAKNEAYFKHAEKMLEMAVNQ GFTPALVLLWCNYIPETWGAKFGTSPLFRKEDIKPYTEMMLEHFEQFEPIYIISGDTD FPTETVTDYYLEALETVSKKAPHALKVLHICGRLKDIPENLQTHPALDLYFYQSGHNS EHQSMAYTLAEHFSQLEPIKPVINSEPCYELMGYSRQKYGRFSREDVRKAAWQSVLSG AIAGISYGAHGIWSWHEEGSTFGSALGEGFVSPFNWRQALHFEGATDYAFLKSFILAN DLTTLAPINLVLNQTPEIRAAETEKVVIIYVPSNVPIYLKGQFVSLDDYAIDLEQGKK VSLAKILHEEKTEIQMTPFLKDSLYVIHK" misc_feature 1066433..1067392 /locus_tag="lmo1036" /note="Protein of unknown function (DUF4038); Region: DUF4038; pfam13204" /db_xref="CDD:463808" regulatory complement(1067704..1067745) /regulatory_class="terminator" regulatory 1067711..1067746 /regulatory_class="terminator" gene complement(1067723..1068526) /locus_tag="lmo1037" /db_xref="GeneID:985124" CDS complement(1067723..1068526) /locus_tag="lmo1037" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464562.1" /db_xref="GeneID:985124" /translation="MQFFRLLWVFTWKQALCCIFPGIIFISLALTKLIDIPFIARYDL LLIICLATQVLLIKFGLETWDELKVIMVFHIIGLGLEIYKVHMGSWSYPEPGLMKLFG VPLYSGFMYSSVASYICQAWKRFDLKMTNWPNIWLVSSLCIAIYANFFTHHFIMDFRW ILIVLVLVLFRKTYVYFKVSSTQLKMPLSFSFLCIAFFIYLAENIASFYGAWSYPDQL VAWRPVHVSKITSWYLLVIISIIIVAQLKFVKQKLEQTSVKAKSEATLK" misc_feature complement(1067747..1068526) /locus_tag="lmo1037" /note="Uncharacterized membrane protein YoaT, DUF817 family [Function unknown]; Region: YoaT; COG3739" /db_xref="CDD:442953" regulatory complement(1068534..1068582) /regulatory_class="terminator" regulatory complement(1068534..1068539) /regulatory_class="ribosome_binding_site" /gene="lmo1037" gene complement(1068594..1069175) /locus_tag="lmo1038" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986325" CDS complement(1068594..1069175) /locus_tag="lmo1038" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464563.1" /db_xref="GeneID:986325" /translation="MKNEKVNVGIVLAGGRSSRFGEPKAFFQDEATGKTWVELTVSKL LPLCDMVFVSANHENHSKLVALFDAEPSIEIIPDQTAFSEFGPLGGIYAVMVEANAYQ KANFLVLPVDMPFLTPKEIGRLADYPNHFAKTAQANHYLVANIPYSREVLHHLLQDEQ HRVRALLEKLHTKPLAFEEDAPFRNINHQNELF" misc_feature complement(1068600..1069151) /locus_tag="lmo1038" /note="MobA catalyzes the formation of molybdopterin guanine dinucleotide; Region: MobA; cd02503" /db_xref="CDD:133000" misc_feature complement(order(1068840..1068842,1068846..1068848, 1068906..1068908,1068915..1068920,1068942..1068944, 1069014..1069016,1069104..1069106,1069128..1069130, 1069134..1069142)) /locus_tag="lmo1038" /note="GTP binding site [active]" /db_xref="CDD:133000" gene complement(1069156..1069818) /locus_tag="lmo1039" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986741" CDS complement(1069156..1069818) /locus_tag="lmo1039" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_464564.1" /db_xref="GeneID:986741" /translation="MLRLQFHKKLPFHDLNIDYTFEKPVTAMMGASGSGKSTLFQCVS GLKSIDGGIIEFDGTPWDDSNISLHLPVTERKVGYLFQNLALFPNMNVYENIAFGLKV KKKKKKEQAEIQQQVRKMSDYLQISHLLYSSVQKLSGGEKQRVAMARAMITEPKLLLL DEPFNGLDEETRLICMKLVGQMAKDFHIPVIFVTHYASEAEMMTEEILVMREGRLEKR KS" misc_feature complement(1069162..1069818) /locus_tag="lmo1039" /note="ATP-binding cassette domain of the molybdenum transport system; Region: ABC_ModC_molybdenum_transporter; cd03297" /db_xref="CDD:213264" misc_feature complement(1069708..1069731) /locus_tag="lmo1039" /note="Walker A/P-loop; other site" /db_xref="CDD:213264" misc_feature complement(order(1069234..1069236,1069333..1069338, 1069573..1069575,1069705..1069713,1069717..1069722)) /locus_tag="lmo1039" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:213264" misc_feature complement(1069573..1069584) /locus_tag="lmo1039" /note="Q-loop/lid; other site" /db_xref="CDD:213264" misc_feature complement(1069381..1069410) /locus_tag="lmo1039" /note="ABC transporter signature motif; other site" /db_xref="CDD:213264" misc_feature complement(1069333..1069350) /locus_tag="lmo1039" /note="Walker B; other site" /db_xref="CDD:213264" misc_feature complement(1069315..1069326) /locus_tag="lmo1039" /note="D-loop; other site" /db_xref="CDD:213264" misc_feature complement(1069228..1069248) /locus_tag="lmo1039" /note="H-loop/switch region; other site" /db_xref="CDD:213264" regulatory complement(1069182..1069187) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1039" gene complement(1069821..1070492) /locus_tag="lmo1040" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986321" CDS complement(1069821..1070492) /locus_tag="lmo1040" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="molybdenum ABC transporter permease" /protein_id="NP_464565.1" /db_xref="GeneID:986321" /translation="MFTSVWHTLLVATISTFLAFMTMLPLSYYFAGRKSRFQLPVEIL ILLPLVLPPTVVGLVLLNILGRNDFIGGVLWDTFDFSFIFSLSGAIVATTIIILPIMY QGLKSAFLSIDHELVWAAETLSANKKQIFTKIILPNCWQPILAGVLLSFCRAMGEFGA SLMVAGYIEGKTDTIASSIYFMVQQGDMRTAIYLGLINVIIGVFALLVIHVLTIRQSN LTRGM" misc_feature complement(1069845..1070492) /locus_tag="lmo1040" /note="ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; Region: ModB; COG4149" /db_xref="CDD:443320" regulatory complement(1069827..1069832) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1040" regulatory complement(1070499..1070504) /regulatory_class="ribosome_binding_site" regulatory 1070584..1070589 /regulatory_class="ribosome_binding_site" gene 1070597..1071367 /locus_tag="lmo1041" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986319" CDS 1070597..1071367 /locus_tag="lmo1041" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="molybdate ABC transporter substrate-binding protein" /protein_id="NP_464566.1" /db_xref="GeneID:986319" /translation="MKKIVLIICCGLLLLLGACEDTPEKVQTTTIHISAAASLKDSID DVKPLFEKANPTIKLSFDFGGSGQIRERVESGAPIDGVLLASKKDADTLIKQNLAEKT KEFAGNELVLIEPKNVDQKTEANLEQLLNDASKIAIGDPESVPAGAYAKQTLENLNLY NAEKAKLVLATDVRQVLSYVEAGNADAGFVYQTDALLSKKVQVKAKIDEKLHDPIAYY SAQVSDSDKKEETATFLDFMNKSEAQKILEKYGFKAAN" misc_feature 1070684..1071355 /locus_tag="lmo1041" /note="Substrate binding domain of putative molybdate-binding protein YvgL and similar proteins;the type 2 periplasmic binding protein fold; Region: PBP2_YvgL_like; cd13537" /db_xref="CDD:270255" misc_feature order(1070702..1070707,1070792..1070794,1070849..1070851, 1071029..1071034,1071110..1071115,1071167..1071169) /locus_tag="lmo1041" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270255" regulatory 1071447..1071452 /regulatory_class="ribosome_binding_site" gene 1071462..1072685 /locus_tag="lmo1042" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986318" CDS 1071462..1072685 /locus_tag="lmo1042" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein MoeA" /protein_id="NP_464567.1" /db_xref="GeneID:986318" /translation="MIEKRNTIRMEQAREVLCNQITHLPVEKKHVTEALNQVLQEPIF APFPAPYFRRSGYDGFAITEVDDGNYPITLRVVAEVPCGETYDKPLKPGETVRIMTGA KVPDNASKIIMLEQSREADNENEIILINTQKSSNITEIGTEFAKGDLLLDRGHILNAG SISLLSSFGIQEVQVIRKPKVAILSTGSELVPAGNPLPDGKIFNSNQPLLENLLKVHH AEICAAEQLPDNYEDTKNRLLELTKIADLIVTTGGVSVGDFDYMADIAKQEAELLFNK IQMRPGSPTTGMWLDKTLIIALSGNPGACFTGFYLLVEPVLTTLMGKDTTETTQVRAK MASDYTKNNGYDRFLRGTYRLSDEGEYLVELVGSDMSSALGNLHLTTCLFKIPRGQVG KLKGEEVEAWLLYSK" misc_feature 1071492..1072673 /locus_tag="lmo1042" /note="MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and...; Region: MoeA; cd00887" /db_xref="CDD:238452" misc_feature order(1071555..1071557,1071888..1071890,1071933..1071944, 1071948..1071950,1071957..1071962,1071966..1071968, 1072068..1072070,1072074..1072076,1072083..1072085, 1072452..1072454,1072575..1072577,1072659..1072661) /locus_tag="lmo1042" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238452" misc_feature order(1072017..1072022,1072026..1072028,1072146..1072148, 1072218..1072220) /locus_tag="lmo1042" /note="putative functional site [active]" /db_xref="CDD:238452" misc_feature order(1072218..1072226,1072356..1072361,1072371..1072373, 1072380..1072382) /locus_tag="lmo1042" /note="putative MPT binding site [active]" /db_xref="CDD:238452" regulatory 1072651..1072656 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1042" gene 1072664..1073149 /locus_tag="lmo1043" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986316" CDS 1072664..1073149 /locus_tag="lmo1043" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="molybdopterin-guanine dinucleotide biosynthesis MobB" /protein_id="NP_464568.1" /db_xref="GeneID:986316" /translation="MAAILQIIGFKNSGKTTLLNALIRASRKENYTVSAIKHDAHDFS VDHAGTDSYSFQESGAEAVVIANSRQYAVMEQTGIDLKTAIQKLPESDIVLIEGYKEG PFPKIILVREQAEIELLKNSKAVHKIATHNPALKKEAIFIGEENALNLFAETLIKEFL K" misc_feature 1072673..1073128 /locus_tag="lmo1043" /note="molybdopterin-guanine dinucleotide biosynthesis protein MobB; Region: mobB; TIGR00176" /db_xref="CDD:272943" misc_feature order(1072694..1072714,1072772..1072774,1072778..1072780, 1072952..1072954,1072961..1072963) /locus_tag="lmo1043" /note="putative active site [active]" /db_xref="CDD:349770" misc_feature order(1072721..1072723,1072730..1072735,1072742..1072744, 1072760..1072780,1072823..1072828,1072835..1072858, 1072865..1072888,1072904..1072909,1072916..1072921) /locus_tag="lmo1043" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:349770" regulatory 1073133..1073138 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1043" gene 1073146..1073568 /locus_tag="lmo1044" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986188" CDS 1073146..1073568 /locus_tag="lmo1044" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="molybdopterin converting factor subunit 2" /protein_id="NP_464569.1" /db_xref="GeneID:986188" /translation="MRYVALQHEKIEIGPLSEKLINKNHGGTNLFVGTIREWTGDIQT EEIRYTSYEEMALKELNKLATEVEAKWGADVVIVHRLGLLQITDIAVVIGVSTPHRAA CYEGSRYIIERLKERVPIWKEEKDVDKTRWGGINAHNS" misc_feature 1073146..1073559 /locus_tag="lmo1044" /note="Molybdopterin synthase catalytic subunit MoaE [Coenzyme transport and metabolism]; Region: MoaE; COG0314" /db_xref="CDD:440083" regulatory 1073540..1073545 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1044" gene 1073552..1073800 /locus_tag="lmo1045" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985638" CDS 1073552..1073800 /locus_tag="lmo1045" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="molybdopterin converting factor subunit 1" /protein_id="NP_464570.1" /db_xref="GeneID:985638" /translation="MLTTVKFFAFLAEKTHKTEVKLNLQQCQTVGEVREVISSEFPEI AVDLATCMLAVNMEFQQDQDFLPEEITEIAVIPPVSGG" misc_feature 1073561..1073797 /locus_tag="lmo1045" /note="ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins; Region: Ubl_MoaD; cd00754" /db_xref="CDD:340452" misc_feature order(1073573..1073578,1073696..1073698,1073702..1073707, 1073711..1073713,1073720..1073731,1073777..1073797) /locus_tag="lmo1045" /note="MoaD-MoeB interaction site [polypeptide binding]; other site" /db_xref="CDD:340452" misc_feature order(1073573..1073578,1073717..1073725,1073765..1073767, 1073780..1073797) /locus_tag="lmo1045" /note="MoaD-MoaE interaction site [polypeptide binding]; other site" /db_xref="CDD:340452" misc_feature order(1073573..1073578,1073720..1073725,1073783..1073797) /locus_tag="lmo1045" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:340452" misc_feature 1073795..1073797 /locus_tag="lmo1045" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:340452" regulatory 1073800..1073805 /regulatory_class="ribosome_binding_site" gene 1073813..1074295 /gene="moaC" /locus_tag="lmo1046" /db_xref="GeneID:986305" CDS 1073813..1074295 /gene="moaC" /locus_tag="lmo1046" /experiment="EXISTENCE:[PMID:19448609]" /note="MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein MoaC" /protein_id="NP_464571.1" /db_xref="GeneID:986305" /translation="MEKDDLTHFNDEKRAKMVDVTSKSETKRRAIASATIHMNEETLA RIHAGKIAKGDVLAVAQVAGIMAAKKTSELIPMCHPIMTTKADISFEDDGKTALTITS EVVTVGKTGVEMEALTAVTIAALTIYDMCKAMDKGMRIEKTYLVEKTGGKSGTFKAEA " misc_feature 1073822..1074292 /gene="moaC" /locus_tag="lmo1046" /note="cyclic pyranopterin monophosphate synthase MoaC; Region: moaC; PRK09364" /db_xref="CDD:236483" misc_feature order(1073861..1073872,1073975..1074052,1074059..1074079, 1074230..1074265) /gene="moaC" /locus_tag="lmo1046" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:238708" misc_feature order(1073969..1073977,1074023..1074037,1074215..1074223) /gene="moaC" /locus_tag="lmo1046" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238708" misc_feature order(1073969..1073971,1074017..1074019,1074038..1074040, 1074044..1074049,1074140..1074142,1074149..1074157, 1074164..1074166,1074197..1074199,1074206..1074208) /gene="moaC" /locus_tag="lmo1046" /note="putative active site [active]" /db_xref="CDD:238708" regulatory 1074310..1074315 /regulatory_class="ribosome_binding_site" gene 1074324..1075325 /gene="moaA" /locus_tag="lmo1047" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984816" CDS 1074324..1075325 /gene="moaA" /locus_tag="lmo1047" /experiment="EXISTENCE:[PMID:19448609]" /note="together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein A" /protein_id="NP_464572.1" /db_xref="GeneID:984816" /translation="MQLLKDKFGRVHDYIRISVTDRCNLRCVYCMPEEGLTFLPHEKV LSKDEIVSFMELMVKFGIKKVRITGGEPLLRTDIVEIVRGLGAIPEIEDISITTNAMY LAKKAEALKEAGLTRVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLN VVLIKGQNDDEITDFLRFTKDKDINIRFIEYMPIGHAGTSWKEKYLPLDTIFEACNEA GYEYEPVDSIRGNGPSENFRIKGAKGTFGVIHPVSAHFCDSCNRLRLTADGYIKACLY WDEEMNIRPFIQDPVKLMQLVQKAIDNKPENHEMALKLQDEVQSNKPTWRRMSQIGG" misc_feature 1074333..1075322 /gene="moaA" /locus_tag="lmo1047" /note="GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA) [Coenzyme transport and metabolism]; Region: MoaA; COG2896" /db_xref="CDD:442141" regulatory complement(1075332..1075357) /regulatory_class="terminator" regulatory 1075334..1075355 /regulatory_class="terminator" gene complement(1075360..1075848) /locus_tag="lmo1048" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986817" CDS complement(1075360..1075848) /locus_tag="lmo1048" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein B" /protein_id="NP_464573.1" /db_xref="GeneID:986817" /translation="MEQKTFIKVTCSILTISDTRNLDTDTSGQLIQSALETAGHEVIS RVVVPDDVTLIKQKINELAANGSFCLITNGGTGIARRDVTYEALFATIQQEIPGFGEI FRMLSYEEVGSRAMVSRAFAGFSESGLLLFALPGSSNACQLAVQKLIIPELPHLIAER QK" misc_feature complement(1075372..1075845) /locus_tag="lmo1048" /note="Molybdopterin biosynthesis enzyme MoaB/MogA [Coenzyme transport and metabolism]; Region: MoaB; COG0521" /db_xref="CDD:440287" regulatory complement(1075854..1075859) /regulatory_class="ribosome_binding_site" gene complement(1075860..1076858) /locus_tag="lmo1049" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986477" CDS complement(1075860..1076858) /locus_tag="lmo1049" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein MoeB" /protein_id="NP_464574.1" /db_xref="GeneID:986477" /translation="MERYDRQMRVKNIGKDGQEKLLTKTILIVGVGAIGSYAAEICAR MGFGKLILIDRDYVELSNLQRQSLFTEQDALDKQAKSYAASKALQLINSDITIEYIVD DANVTSLTPYVGTIDYILDCTDNFMTRDFLNQFCFSHQIPWIFTSCAGNYANLMPIIP PDSACLHCLLGDIPQTNAASCDIIGVDGALIPIVAGMQVSLLTQMIINPDFKANTYYQ LDNWHFSFQTIEVKKRPDCSSCAPGKMVSEVPFSGQTVTLCGRDTVQFRLPNKSNYRE IKLLLTEQKIIYNENPALLSFQYEKFQFVIFKNGRVLLHGSENIAEAKKIYHLFFN" misc_feature complement(1075866..1076858) /locus_tag="lmo1049" /note="thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated; Region: PRK07688" /db_xref="CDD:181084" regulatory complement(1076864..1076870) /regulatory_class="ribosome_binding_site" regulatory 1076975..1076980 /regulatory_class="ribosome_binding_site" gene 1076989..1077543 /locus_tag="lmo1050" /db_xref="GeneID:986511" CDS 1076989..1077543 /locus_tag="lmo1050" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464575.1" /db_xref="GeneID:986511" /translation="MKQRVETEKFYPAYPVFVLTYLNEIGEPQMSTGSSSYTLGDSIV IGVSAESNAGKHLHAGQKFAVNFPNTEQLGLIEQGGFSSGKRNDKIKVHQIELTKSDS GGVAYIDVCPIVLECTVIQTVSDMDYHTIFAKIDSRLFEKNLVDSEGHFIHEELDLVL FSGDANERKFRQLDAKIETIGGHS" misc_feature 1077025..1077384 /locus_tag="lmo1050" /note="FMN reductase RutF, DIM6/NTAB family [Energy production and conversion]; Region: RutF; COG1853" /db_xref="CDD:441458" regulatory complement(1077553..1077581) /regulatory_class="terminator" gene complement(1077592..1078143) /gene="def" /locus_tag="lmo1051" /db_xref="GeneID:986625" CDS complement(1077592..1078143) /gene="def" /locus_tag="lmo1051" /EC_number="3.5.1.88" /experiment="EXISTENCE:[PMID:19448609]" /note="cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)" /codon_start=1 /transl_table=11 /product="peptide deformylase" /protein_id="NP_464576.1" /db_xref="GeneID:986625" /translation="MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGRDMLEFLINS QDEDLAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDEKDRLYSYVLYNPKIRSHSVQQA CLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNG IMFYDHINKENPSYLPPDVDVFG" misc_feature complement(1077607..1078137) /gene="def" /locus_tag="lmo1051" /note="peptide deformylase; Reviewed; Region: def; PRK00150" /db_xref="CDD:234668" misc_feature complement(order(1077673..1077675,1077682..1077687, 1077811..1077819,1077949..1077951,1077964..1077972)) /gene="def" /locus_tag="lmo1051" /note="active site" /db_xref="CDD:238271" misc_feature complement(order(1077682..1077684,1077811..1077813, 1077949..1077951,1077964..1077966)) /gene="def" /locus_tag="lmo1051" /note="catalytic residues [active]" /db_xref="CDD:238271" misc_feature complement(order(1077673..1077675,1077685..1077687, 1077814..1077816)) /gene="def" /locus_tag="lmo1051" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238271" regulatory complement(1078154..1078159) /regulatory_class="ribosome_binding_site" gene 1078584..1079111 /locus_tag="lmos38" /db_xref="GeneID:18245189" misc_RNA 1078584..1079111 /locus_tag="lmos38" /product="rli54" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245189" regulatory 1078963..1078968 /regulatory_class="ribosome_binding_site" /locus_tag="lmos38" gene 1078977..1080092 /gene="pdhA" /locus_tag="lmo1052" /db_xref="GeneID:986808" CDS 1078977..1080092 /gene="pdhA" /locus_tag="lmo1052" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase subunit E1 alpha" /protein_id="NP_464577.1" /db_xref="GeneID:986808" /translation="MASKTKKAIIDVKKQFEAVHKQFELVQILNEKGEIVNPDLMPDL TDDQLVELMTRMVWTRVLDQRSISLNRQGRLGFYAPTAGQEASQLASHYALEKHDYIL PGYRDVPQLIWHGLPLTKAFLFSRGHFVGNQFPEDLNVLSPQIIIGAQIVQAAGVALG LKKRKKDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNNKFAISTPREKQSA AETLAQKAVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIETMTYRYGPHTL SGDDPTRYRTKELDGEWELKDPIVRFRTFLEGKGLWNEEKENAVIDQAKEEIKVAIKE ADATPKQTVTDLLKNMYETPTAPIKEQLAIYEAKESK" misc_feature 1079046..1080071 /gene="pdhA" /locus_tag="lmo1052" /note="pyruvate dehydrogenase E1 component, alpha subunit; Region: PDH_E1_alph_x; TIGR03181" /db_xref="CDD:213783" misc_feature order(1079289..1079294,1079409..1079411,1079415..1079417, 1079499..1079510,1079589..1079591,1079595..1079597, 1079796..1079798) /gene="pdhA" /locus_tag="lmo1052" /note="TPP-binding site [chemical binding]; other site" /db_xref="CDD:238958" misc_feature order(1079355..1079357,1079409..1079414,1079505..1079507, 1079511..1079522,1079529..1079531,1079541..1079543, 1079553..1079555,1079598..1079609,1079649..1079651, 1079664..1079666,1079811..1079813,1079823..1079825) /gene="pdhA" /locus_tag="lmo1052" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:238958" misc_feature order(1079394..1079396,1079400..1079402,1079406..1079408, 1079421..1079423,1079430..1079435,1079442..1079447, 1079451..1079456,1079463..1079465,1079520..1079525, 1079541..1079546,1079553..1079555) /gene="pdhA" /locus_tag="lmo1052" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:238958" misc_feature order(1079781..1079801,1079805..1079807,1079811..1079840, 1079862..1079870) /gene="pdhA" /locus_tag="lmo1052" /note="phosphorylation loop region [posttranslational modification]" /db_xref="CDD:238958" regulatory 1080079..1080084 /regulatory_class="ribosome_binding_site" /gene="pdhA" /locus_tag="lmo1052" gene 1080095..1081072 /gene="PdhB" /locus_tag="lmo1053" /db_xref="GeneID:984409" CDS 1080095..1081072 /gene="PdhB" /locus_tag="lmo1053" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase subunit E1 beta" /protein_id="NP_464578.1" /db_xref="GeneID:984409" /translation="MAQKTMIQAITDALAVELEKDENVLVFGEDVGKNGGVFRATEGL QEKFGEDRVFDTPLAESGIGGLAIGLALEGFRPVPEIQFFGFVFEVMDSVAGQMARMR YRTGGTRNAPITIRAPFGGGVHTPEMHADNLEGLMAQSPGLKVVIPSTPYDAKGLLIS AIRDNDPVIFLEHMKLYRSFREEVPEGEYTVEIGKAAVRREGTDVSIITYGAMVQESM KAAEALEKDGVSVEVIDLRTISPIDVETIIASVKKTNRAVVVQEAQKQAGIAANIVAE INDHAILSLEAPVMRVAAPDSVFPFSQAETVWLPNHNDIIERVKEVIAF" misc_feature 1080095..1081069 /gene="PdhB" /locus_tag="lmo1053" /note="Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component, beta subunit [Energy production and conversion]; Region: AcoB; COG0022" /db_xref="CDD:439793" regulatory 1081168..1081173 /regulatory_class="ribosome_binding_site" gene 1081183..1082817 /gene="pdhC" /locus_tag="lmo1054" /db_xref="GeneID:986301" CDS 1081183..1082817 /gene="pdhC" /locus_tag="lmo1054" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA" /codon_start=1 /transl_table=11 /product="dihydrolipoamide acetyltransferase" /protein_id="NP_464579.1" /db_xref="GeneID:986301" /translation="MAYSFKLPDIGEGIHEGEIVKWFVQPGDKIEEDESLFEVQNDKS VEEITSPVSGTIKEIKVAEGTVATVGQVLVTFDGVEGHEDDAEEESAAPKAESTESTP APAQASGKGIFEFKLPDIGEGIHEGEIVKWFIQPGDKVEEDQSIFEVQNDKSVEEITS PVDGTVKDILVSEGTVATVGQVLVTFEGDFEGEASHESTPESPAEDAALANNDATSAP ATGGNGTPSSKKDPNGLVIAMPSVRKYAREKGVNIAEVAGSGKNNRVVKADIDAFLNG EQPAAATTTAQTEEKAAAPKAEKAAGKQPVASSDAYPETREKLTPTRRAIAKAMVNSK HTAPHVTLMDEIEVTALMAHRKRFKEVAAEKGIKLTFLPYMVKALVATLRDFPVLNTT LDDATEELVYKHYFNVGIAADTDHGLYVPVIKNADKKSVFQISDEINELAGKARDGKL TADEMRHGSATISNIGSAGGQWFTPVINYPEVAILGVGRIAQKPIVKDGEIVAAPVLA LSLSFDHRVIDGATAQKAMNNIKRLLNDPELLLMEV" misc_feature 1081183..1082808 /gene="pdhC" /locus_tag="lmo1054" /note="dihydrolipoamide acetyltransferase; Reviewed; Region: PRK11855" /db_xref="CDD:237000" regulatory 1082807..1082812 /regulatory_class="ribosome_binding_site" /gene="pdhC" /locus_tag="lmo1054" gene 1082822..1084225 /gene="PdhD" /locus_tag="lmo1055" /db_xref="GeneID:986542" CDS 1082822..1084225 /gene="PdhD" /locus_tag="lmo1055" /EC_number="1.8.1.4" /experiment="EXISTENCE:[PMID:19448609]" /note="E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide" /codon_start=1 /transl_table=11 /product="dihydrolipoamide dehydrogenase" /protein_id="NP_464580.1" /db_xref="GeneID:986542" /translation="MVVGDFPEERDTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYG GVCLNVGCIPSKALITIGHRFKEAGHSDNMGITADNVNLDFTKAQEWKGGVVNKLTSG VKGLLKKNKVEMLEGEAFFVDDHSLRVIHPDSAQTYTFNNVIIATGSRPIEIPGFKYG KRVLSSTGALALTEVPKKLVVIGGGYIGTELGGAFANLGTELTILEGGPEILPTYEKD MVSLVKRNLKSKNVEMVTKALAKSAEETENGVKVTYEANGETKTIEADYVLVTVGRRP NTDEIGLEQAGVKVTERGLVEVDKQGRSNVSNIFAIGDIVPGVPLAHKASYEAKIAAE AIAGEKSENDYTALPAVVFSDPELATVGLTEKEAKEKGFDVKAAKFPFGGNGRALSLD APEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGLAIESGITAEDIALTIHAHPSLG ELTMEAAELALGRPIHM" misc_feature 1082837..1084222 /gene="PdhD" /locus_tag="lmo1055" /note="dihydrolipoamide dehydrogenase; Reviewed; Region: PRK06416" /db_xref="CDD:235798" regulatory 1084236..1084276 /regulatory_class="terminator" gene 1084413..1084724 /locus_tag="lmo1056" /db_xref="GeneID:986297" CDS 1084413..1084724 /locus_tag="lmo1056" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1056" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464581.1" /db_xref="GeneID:986297" /translation="MEKQTATWKKALFWFAYVVAGICFVLTIVAFGVGFFHHMHDTGG WRSVIQILETPITGFVKMTGGYIGKGILEVIILIIVSYVLPIFFCFATHYLKVKRREM T" regulatory 1084839..1084844 /regulatory_class="ribosome_binding_site" gene 1084853..1085806 /locus_tag="lmo1057" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986824" CDS 1084853..1085806 /locus_tag="lmo1057" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="L-lactate dehydrogenase" /protein_id="NP_464582.1" /db_xref="GeneID:986824" /translation="MPSKKKKIVVIGRSNLQNLYIHTVLLKKLPAEIYLIDDQAKTSV QDFDYASYYHADVTIHSGTFNECRNADIVVFFQEEMSNQIVSKEDNVALIIEKVKKMM ATGFRGIVLVATAESNVVAALIKRFSGLSANQIITLGTMLATSYFQVEIAKLFKISPK NVHGYIIGDNAEDVIPVWSRAFLGGKPILSYLAEDQKRISAEDLQNLTKMITKIPDFP FENKDGCTFRFSTVTVLAELTEVILRDEARVITVGVEVKEAYGLENPVFISVPAVIGA EGVRELLELNLSDDEQKELKQIAAKTTEKLEELQLNKGGIS" misc_feature 1084868..1085776 /locus_tag="lmo1057" /note="A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous...; Region: Rossmann-fold NAD(P)(+)-binding proteins; cl21454" /db_xref="CDD:473865" misc_feature order(1084892..1084900,1084961..1084963,1085129..1085131, 1085189..1085197,1085264..1085266,1085276..1085278, 1085360..1085362,1085543..1085545) /locus_tag="lmo1057" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:133419" misc_feature order(1084904..1084906,1084916..1084918,1084967..1084969, 1084979..1084981,1084985..1084990,1084994..1084999, 1085285..1085290,1085294..1085299,1085315..1085317, 1085549..1085551,1085561..1085563) /locus_tag="lmo1057" /note="LDH/MDH dimer interface [polypeptide binding]; other site" /db_xref="CDD:133419" misc_feature order(1085195..1085197,1085288..1085290,1085360..1085362) /locus_tag="lmo1057" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133419" regulatory 1085791..1085796 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1057" gene 1085806..1086078 /locus_tag="lmo1058" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986292" CDS 1085806..1086078 /locus_tag="lmo1058" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464583.1" /db_xref="GeneID:986292" /translation="MEYSYPLNPDWTTEEMTIVVQFLEAIERAYEKGIDTLELKEKYR AFKQVVPAKGEEKRIGIDFEKASGYSAYKVMQLVKNATTSKIKMQP" misc_feature 1085806..1086075 /locus_tag="lmo1058" /note="hypothetical protein; Provisional; Region: PRK04387" /db_xref="CDD:179841" regulatory 1086084..1086089 /regulatory_class="ribosome_binding_site" gene 1086100..1086630 /locus_tag="lmo1059" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984717" CDS 1086100..1086630 /locus_tag="lmo1059" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1059" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464584.1" /db_xref="GeneID:984717" /translation="MDISQIKAEVVTPETGIHVGEKAAPVKVMSFVNLRCPFCREWNE KSKDVLTEYIQAGKIELIIKPFDKEKESLQRGNVTHRYLDYSTPEKTRETINKIYSKQ DEWGSLSLDEVATYMESELGLTEQDNKAASEKIVAEANAANVVFVPTVIVGEHIFDEH ISPEELRSLLDDELAK" misc_feature 1086139..1086615 /locus_tag="lmo1059" /note="Region: Thioredoxin_4; pfam13462" /db_xref="CDD:433227" regulatory 1086643..1086703 /regulatory_class="terminator" regulatory 1086761..1086766 /regulatory_class="ribosome_binding_site" gene 1086772..1087434 /locus_tag="lmo1060" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984788" CDS 1086772..1087434 /locus_tag="lmo1060" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464585.1" /db_xref="GeneID:984788" /translation="MEKILIAEDDSAILGVITAFLTEAGYQVMTAKNGIEAYHLFQKE TFDLIIMDIMMPSMDGYTLTELIRSTSTTPILMMTALSEEDDELKGFDLGADDYIQKP FSYLVLLKRVQVLLRRVNQSETKKQILRCGNISVDTETFEVISAGETIELTKKEFDIL VLLIKNQKKVITREMILSQAWDFAAIVDTSIINTHMKNLRKKLHTEKIQTIRGAGYKM DE" misc_feature 1086772..1087401 /locus_tag="lmo1060" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" regulatory 1087404..1087409 /regulatory_class="ribosome_binding_site" /gene="lmo1061" gene 1087409..1088854 /locus_tag="lmo1061" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986289" CDS 1087409..1088854 /locus_tag="lmo1061" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component sensor histidine kinase" /protein_id="NP_464586.1" /db_xref="GeneID:986289" /translation="MLAIKWMNKVRTRISWKIFLIFVSIILLFTALVYAMLIFFLPQF YYDYKIKQINDYANEVVKAGEADDIEGVEKALNDFMENTNILPILIDSNGNIVYIPNV NMASIKSATSTVVDGTKAEGGTTATDYSGGTETKNKPISINGQTYNLTYTINIQKIND ISTVLLQFAPYFILFAFILSLLTAYFFSRRMVRPLLRMNKVASKMANLNFTEVLPITS KDEIGQLSGNLNEMAINLEKTMLELNEVNKKLQKEIEKERQLEEMRKSFVTAISHELK SPLAAVMGQVEAMRYNVAPYDNHPKYLQESYQILEKMSQMIQEMLDVSKVDQTNYMIE KTSFSLTEMVEKIIYSKKMVPHRLSQKVVFQVKEDVTVTANYAFIEKAIENIFENAFN YSKEETTILVEIQNREKGFYFSVHNKATSIPEEELNKLFEPFYRLEKSGNKKTGGNGL GLFIIAKFLDIQRIHYKLINEKDGVTFQIWQ" misc_feature 1087409..>1088194 /locus_tag="lmo1061" /note="HAMP domain [Signal transduction mechanisms]; Region: HAMP; COG2770" /db_xref="CDD:442051" misc_feature 1087826..1088848 /locus_tag="lmo1061" /note="Sensor histidine kinase WalK [Signal transduction mechanisms]; Region: WalK; COG5002" /db_xref="CDD:444026" regulatory 1088871..1088909 /regulatory_class="terminator" regulatory 1088928..1088933 /regulatory_class="ribosome_binding_site" gene 1088941..1090362 /locus_tag="lmo1062" /db_xref="GeneID:986633" CDS 1088941..1090362 /locus_tag="lmo1062" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporters permease" /protein_id="NP_464587.1" /db_xref="GeneID:986633" /translation="MDFIRRAFISINAKKGKSLVLFTLLLVIFSLVFTGFAIQESTKQ SAESARKQLGANVTLQMNQEEIMKKAQSGEEIKEEDLSIPTEDVNKIKKLPQVDNYTI SSEGSASKGDLTPIPAKKQEGGQGGMTQVAGTDTNGKKVETPSFSVKAVNQTATLNSF KDKTDKIISGKPLTSDDKENTALIEKQLAKKNNLKVGDTFQLTNDKKKKVKFVVKGIY QSNQKIEPQLESFQMMLPGNKIYANIKGAKDFLWSGGIEKAEFNLKDPKEINSFISEA KKLTDVDNGDMFQFDAQNSAYKKMIGPIERVASFSNIIVMITLLAGGLILALIVLLSI RERKFEMGVLLSLGESKTKLMSQFLVEVLIIAALAFSFSCALANPIGQAISNQMLSTE VTKEANKENETSTQESMAIALGGEEKTKVDAEPIDKIDVVITSNIMGQVGGLGFILIF LATTIPCLFIIRLQPKMLFTQKD" misc_feature 1089475..1090335 /locus_tag="lmo1062" /note="ABC-type transport system involved in lipoprotein release, permease component LolC [Cell wall/membrane/envelope biogenesis]; Region: LolE; COG4591" /db_xref="CDD:443648" regulatory 1090362..1090367 /regulatory_class="ribosome_binding_site" gene 1090375..1091043 /locus_tag="lmo1063" /db_xref="GeneID:986288" CDS 1090375..1091043 /locus_tag="lmo1063" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP binding protein" /protein_id="NP_464588.1" /db_xref="GeneID:986288" /translation="METNLELQDITYQYDSGNKAQIVLRNLSYTFSEGTFYTILGPSG AGKTTLLSIAAGIDKPTSGKLIINKKVLNETMSLQSYRKSLSSIIFQTYNLIPYMTAV QNVYTAMGIQHSQMKDKRKRAIELLKEVGLTDKQINSPVLKLSGGQQQRVTIARALSG NAPFIFADEPTGNLDHETSEHIIDLFRDLAHKKNKCVVMVTHDNHVASRSDVILNLKG KTLI" misc_feature 1090375..1091025 /locus_tag="lmo1063" /note="ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]; Region: LolD; COG1136" /db_xref="CDD:440751" regulatory complement(1091047..1091096) /regulatory_class="terminator" regulatory 1091058..1091107 /regulatory_class="terminator" gene complement(1091110..1092054) /locus_tag="lmo1064" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986286" CDS complement(1091110..1092054) /locus_tag="lmo1064" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_464589.1" /db_xref="GeneID:986286" /translation="MHQIFKSDENGKLIELEEVTRNCWINIVAPTSEEINKIADNYEI PLEFLEDPLDKDESARIERDDDSDSVLIVCDFPVVDEDDIHYASFETIPMGIIITKDY FITICTIDSSIVQSFIRNRIKGFYTHMKTRFALQILYMISTTFLRHLKRLNRQTDEIE KELHESMKNKQLYDLMGIEKSLVYFVTALKSNKVVLDKMMRQNIVKMYEEDQDLLEDV IIENRQGIEMAEVHSNILSGMMDAYASIISNNMNIVMKFLTSFTIILTIPTMVFSFYG MNVKLPFMNTPMAWMLTLGFAFGIAGALAIVFWRRKFF" misc_feature complement(1091113..1091985) /locus_tag="lmo1064" /note="uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family; Region: EcCorA_ZntB-like_u2; cd12827" /db_xref="CDD:213361" misc_feature complement(order(1091398..1091400,1091464..1091466, 1091473..1091478,1091623..1091625,1091632..1091634, 1091716..1091721,1091725..1091736,1091776..1091778, 1091830..1091832,1091836..1091838,1091878..1091880, 1091977..1091979)) /locus_tag="lmo1064" /note="Cl binding site [ion binding]; other site" /db_xref="CDD:213361" misc_feature complement(order(1091122..1091124,1091131..1091133, 1091170..1091175,1091182..1091187,1091218..1091241, 1091245..1091262,1091266..1091274,1091278..1091316, 1091320..1091343,1091350..1091358,1091362..1091367, 1091371..1091376,1091383..1091388,1091392..1091397, 1091404..1091409,1091413..1091418,1091449..1091454, 1091461..1091466,1091473..1091478,1091482..1091484, 1091494..1091499,1091503..1091508,1091515..1091520, 1091527..1091532,1091536..1091541,1091575..1091577, 1091584..1091589,1091593..1091598,1091605..1091607, 1091614..1091619,1091626..1091628,1091638..1091640, 1091650..1091652,1091659..1091661,1091695..1091697, 1091707..1091709,1091869..1091871,1091875..1091877, 1091902..1091907,1091914..1091916)) /locus_tag="lmo1064" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:213361" regulatory complement(1092063..1092068) /regulatory_class="ribosome_binding_site" gene complement(1092255..1092869) /locus_tag="lmo1065" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984607" CDS complement(1092255..1092869) /locus_tag="lmo1065" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464590.1" /db_xref="GeneID:984607" /translation="MTFKGFSKKDFKTMQISGLEARMTGIQNDIQPKFRAVGEELTTY LSAKLGDEMFLHIARHQRRSVNPPDSTWLAICHDKRGYKKHPHFQVGLFDKYLFIWLA FIYENEESLKIANRFLKEKKLLADLPDNFAISPDHTEEKTYPVHDGQLEATLERFRDV KKGEFLVGKIYLPDDNHLSPAKDFIKEAEMVLDELIPLYKAALQ" misc_feature complement(1092258..1092866) /locus_tag="lmo1065" /note="Uncharacterized conserved protein YktB, UPF0637 family [Function unknown]; Region: YktB; COG4493" /db_xref="CDD:443582" regulatory complement(1092877..1092882) /regulatory_class="ribosome_binding_site" regulatory 1092987..1092992 /regulatory_class="ribosome_binding_site" gene 1093000..1093773 /locus_tag="lmo1066" /db_xref="GeneID:986059" CDS 1093000..1093773 /locus_tag="lmo1066" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="myo-inositol-1(or 4)-monophosphatase" /protein_id="NP_464591.1" /db_xref="GeneID:986059" /translation="MDSEKIDYLARLWIMEAAAKIKQSFKETLDIDVKSGRNDLVTNM DKETEAFFVQQIKDHFPDHCLFGEEGMASDVTDLDGVVWILDPIDGTLNFVEQQRDFA ISLAVYEDGIGRLAYIYDVTRDELYFGEKGKGATVNGRTIPKLDPAIDLKDTLLIANL SVTRKFPTMWEAVKVSRGLRLHGAASLEYMDVATGRAGAYLSANLAPWDIAAGKIIVE ELGGKVTRINGEKINMLEKGSSIVASPKIHQTLLDNYLP" misc_feature 1093018..1093731 /locus_tag="lmo1066" /note="Inositol-monophosphatase-like domains. This family of phosphatases is dependent on bivalent metal ions such as Mg++, and many members are inhibited by Li+ (which is thought to displace a bivalent ion in the active site). Substrates include fructose-1; Region: IMPase_like; cd01637" /db_xref="CDD:238815" misc_feature order(1093132..1093134,1093201..1093206,1093255..1093272, 1093621..1093626) /locus_tag="lmo1066" /note="active site" /db_xref="CDD:238815" regulatory 1093951..1093956 /regulatory_class="ribosome_binding_site" gene 1093965..1095803 /locus_tag="lmo1067" /db_xref="GeneID:986279" CDS 1093965..1095803 /locus_tag="lmo1067" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GTP-binding elongation factor" /protein_id="NP_464592.1" /db_xref="GeneID:986279" /translation="MNLRNDIRNVAIIAHVDHGKTTLVDQLLRQSGTFRDNETVAERA MDNNDLERERGITILAKNTAIKYEDTRVNIMDTPGHADFGGEVERIMKMVDGVLLVVD AYEGTMPQTRFVLKKALEQNLTPIVVVNKIDRDFARPEEVVDEVLELFIELGANDDQL EFPVVYASAINGTSSYDSDPAEQKETMKPLLDTIIEHIPAPVDNSDEPLQFQVSLLDY NDYVGRIGIGRVFRGTMHVGQTVALIKLDGTVKQFRVTKMFGFFGLKRDEIKEAKAGD LVALAGMEDIFVGETVTPFDHQEALPLLRIDEPTLQMTFVTNNSPFAGREGKHVTSRK IEERLLAELQTDVSLRVEPTASPDAWVVSGRGELHLSILIETMRREGYELQVSKPEVI IREIDGVKCEPVEDVQIDTPEEFMGSVIESISQRKGEMKNMINDGNGQVRLQFMVPAR GLIGYTTDFLSMTRGYGIINHTFDSYQPIQKGRVGGRSRGVLVSMETGKSTTYGTMQV EDRGTIFIEPGTDIYEGMIVGENNREGDIAVNIVKAKQMTNIRSANKDQTNVIKKPRH LSLEESLEFLNEDEYCEVTPESIRLRKKILNKNEREKAAKRSKTAE" misc_feature 1093974..1095791 /locus_tag="lmo1067" /note="Predicted membrane GTPase TypA/BipA involved in stress response [Signal transduction mechanisms]; Region: TypA; COG1217" /db_xref="CDD:440830" regulatory 1095817..1095870 /regulatory_class="terminator" regulatory 1095961..1095966 /regulatory_class="ribosome_binding_site" gene 1095975..1096835 /locus_tag="lmo1068" /db_xref="GeneID:985811" CDS 1095975..1096835 /locus_tag="lmo1068" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1068" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464593.1" /db_xref="GeneID:985811" /translation="MKKWMVIISIISLVALLGACGNNDNEKDQEDKSTTDSTTKKAKS SSNESNKAAETKENDTNDKAATTDKGSSNPTKEEKDTSTTTDTPKKETPKSPAKTEAF SFSPSGFKVSTVESILGGDVTTTYLSSSKSFQKDFEALTLFINQYKVEHVINPTKEVS ASNPESYLANKNGYVITLDISIKNNSKKDKMYKADQISLLGASKSVGGSLDNFIPSGF HLIGSSSDPYNFTAGKTARGLLTFTMDEATYNDLAKDSQIGVPDPSRFDSSSTKGSSQ DNVVAPFPIK" misc_feature 1096275..1096832 /locus_tag="lmo1068" /note="Domain of unknown function (DUF5068); Region: DUF5068; pfam16781" /db_xref="CDD:407046" regulatory 1096840..1096880 /regulatory_class="terminator" regulatory complement(1096840..1096869) /regulatory_class="terminator" gene complement(1096874..1097116) /locus_tag="lmo1069" /db_xref="GeneID:986276" CDS complement(1096874..1097116) /locus_tag="lmo1069" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464594.1" /db_xref="GeneID:986276" /translation="MNAKCILCERVDELDNREFKTKQLRNKPIRMYLCPECEHRVAIN TISRVNSGHFNFHKPVVISNSELKNMLEHNKETISE" misc_feature complement(1096919..1097116) /locus_tag="lmo1069" /note="Uncharacterized conserved protein YlaI, DUF2197 family [Function unknown]; Region: YlaI; COG4896" /db_xref="CDD:443924" regulatory complement(1097125..1097130) /regulatory_class="ribosome_binding_site" regulatory 1097309..1097314 /regulatory_class="ribosome_binding_site" gene 1097322..1097603 /locus_tag="lmo1070" /db_xref="GeneID:986295" CDS 1097322..1097603 /locus_tag="lmo1070" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464595.1" /db_xref="GeneID:986295" /translation="MANKKIDHREEAVELLKQDAKRILQLIKVQMDNLTLPQCPAYEE VLDTQMYGLSREINFATRLGLIEPEEGKKLMSTLEKELSTLHELSMSKK" misc_feature 1097322..1097597 /locus_tag="lmo1070" /note="hypothetical protein; Provisional; Region: PRK13666" /db_xref="CDD:184223" regulatory 1097619..1097652 /regulatory_class="terminator" regulatory 1097774..1097779 /regulatory_class="ribosome_binding_site" gene 1097786..1098988 /locus_tag="lmo1071" /db_xref="GeneID:986183" CDS 1097786..1098988 /locus_tag="lmo1071" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division protein FtsW" /protein_id="NP_464596.1" /db_xref="GeneID:986183" /translation="MFKRILKSYDYAFIAVFIVLCLFGLIMIYSASWSLAIGKGLPAD YFYARQVKNFIISFIFFILFALLPFKFYQNNKVLMLIVFGSIGVLLLIFLVGKTVNNA NSWLVLGPRSLQPGEFAKLAVIIYMSAIYAKKQSYIDDFNRGVLPPIFFLAFVCFLIA IQPDTGTAFIIFLVGCCIIITSGMRLRTIMKLIGIGMGIIIGLTLILFALPDSVRNEI VSPTKVARITTFMNPFEYADKEGHQLINSFYAIGSGGVSGQGLGESVQKLGYLPEAHT DFIIAVVAEELGVFGVMFIILALFFIIFKTITTGLRAKDPFASLMCYGIASLIAIQAF INLGGASGLIPLTGVTLPFISYGGSSLMVLSMMLGIVANISMFTKYQRVYKADGSTKE LPKKQKRR" misc_feature 1097786..1098931 /locus_tag="lmo1071" /note="Peptodoglycan polymerase FtsW/RodA/SpoVE [Cell cycle control, cell division, chromosome partitioning]; Region: FtsW; COG0772" /db_xref="CDD:440535" regulatory 1099003..1099027 /regulatory_class="terminator" regulatory 1099254..1099259 /regulatory_class="ribosome_binding_site" gene 1099266..1102706 /gene="pycA" /locus_tag="lmo1072" /db_xref="GeneID:986269" CDS 1099266..1102706 /gene="pycA" /locus_tag="lmo1072" /EC_number="6.4.1.1" /experiment="EXISTENCE:[PMID:19448609]" /note="biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate" /codon_start=1 /transl_table=11 /product="pyruvate carboxylase" /protein_id="NP_464597.1" /db_xref="GeneID:986269" /translation="MNRIKKVLVANRGEIAIRVMRACTELKIKTVAIYSQEDTGSFHR YKSDEAYLVGAGKKPIDAYLDIENIIEIAKESGADAIHPGYGFLSENIEFARRCEQEG IIFVGPKSKHLDMFGDKIKAKEQALLADIPVIPGSNGPVAGIKEVEEFGEKNGYPLMI KASLGGGGRGMRVVESKEHVKESFERASSEAKAAFGNDEVYVEKCVMNPKHIEVQILG DTHGNIVHLFERDCSIQRRHQKVVEVAPCNAITSELRNRICDAAVKLMKNVDYINAGT VEFLVEGDDFYFIEVNPRVQVEHTITEMITGIDIVQSQLFIADGYALHDQLVAIPKQE DIHIHGSAIQSRITTEDPLNNFMPDTGRVDTYRSTGGFGVRLDAGNGFQGTVVTPFYD SLLVKLCTWGMTFEQATRKMRRNLIEFRIRGVKTNIPFLLNVVRHPDFASGNYNTSFI DTTPELFKFPHIRDRGTKTLRYIGNVTVNGFPGIKHRDKPVYAEPRLPKIPYGSQISP GTKQILDAKGPEGVVDWVKKQEEVLLTDTTLRDAHQSLLATRVRSKDIFQVADAMAHL LPNMFSFEMWGGATFDVAYRFLNEDPWVRLETLRKQIPNVMFQMLLRGANAVGYKNYP DNVIREFVKQSAQSGVDVFRVFDSLNWIKGMEVSIDAVREAGKVVEAAICYTGDIDDD TRTKYTIDYYKDMAKELVAQGTHILGIKDMAGLLKPQAAYRLIGELKDTVDVPIHLHT HDTSGNGIYTYAAAVSAGVDIVDVASSAMSGATSQPSMTGLYYGLVNGNRQTNLDAQN SQIINHYWEDVRHYYKDFDNALNSPQTEVYIHEMPGGQYTNLQQQAIAVGLGDRWDEV KEMYTVVNQMFGDIVKVTPSSKVVGDLALFMVQNELSEEDVYEKGDTIDFPDSVIEFF MGEIGQPYGGFPEKLQKLVLKGRTPLTDRPGALMEPVNFVDVKAELKEKMGYEPTEKD VISYILYPKVFLDYQDMINKYGDVTVLDTPTFYKGMRLGETIEVELEKGKILLIKLNS IGEPIADGTRVIYFELNGQPREINIQDMNVQSTVIARRKIDTTNPEHVGATMTGSVIQ VVVKKGDSVKKGDPLLITEAMKMETTIQAPFDGEVSSIYVSDGDTIESGDLLIEVNRI " misc_feature 1099266..1102694 /gene="pycA" /locus_tag="lmo1072" /note="Pyruvate carboxylase [Energy production and conversion]; Region: PycA; COG1038" /db_xref="CDD:440660" regulatory 1102844..1102849 /regulatory_class="ribosome_binding_site" gene 1102858..1103757 /locus_tag="lmo1073" /db_xref="GeneID:986508" CDS 1102858..1103757 /locus_tag="lmo1073" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="metal ABC transporter substrate-binding protein" /protein_id="NP_464598.1" /db_xref="GeneID:986508" /translation="MKWFKGIAVVLLLAILTACGNTEVKETTKQTEEIKVKDATGETI TLKKAPTKIVSLIPSNTEILFALGLGDEVKGVSAYDDYPKEAQKIEKVTSTSVDTEKI IALKPDLVLGHESMLATEKDAYKILTDAGINVFVVPDATNLKEVEKSIATIGDLTGTE KEATKVTDSMEKQKVAIEKKAKELKTSPKVWIEISPDLYTAGKGTFMNEMLELAGGTN IVTESGFIPYNEEKVVELQPDIILSVYPDAKSTIQKRAAWKDIPAIKNDKIYEMDANK LSRPGPRLLEGAADIQAVLEKNN" misc_feature 1102999..1103586 /locus_tag="lmo1073" /note="Periplasmic binding protein YvrC. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria and archaea. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct...; Region: YvrC; cd01143" /db_xref="CDD:238563" misc_feature 1103110..1103112 /locus_tag="lmo1073" /note="putative binding site residues [active]" /db_xref="CDD:238563" regulatory 1104032..1104037 /regulatory_class="ribosome_binding_site" gene 1104048..1104851 /locus_tag="lmo1074" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986267" CDS 1104048..1104851 /locus_tag="lmo1074" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="teichoic acid translocation permease TagG" /protein_id="NP_464599.1" /db_xref="GeneID:986267" /translation="MKQIIEVLKEQFKYAPMIFRIARYEDKATYQSHYLGLAWQVLNP LIQIAIYYFVFGFAFNSSSGSNASYIEWMLAGIIPWFFISGVILQGANSIYNKINMVS KMNFPMSILPSINIASNLTSYFTMMVLLVGLFAVKGTPITIYWGQYLYYFVAMIAFLY SFTLLNATISVLVRDYYIMLQSLIRVLFYMSGVVWDLQTKLPEWAFNILKLNPIYYLI NGFRETFLMEKMFWENPSYTVYFWLLTGVLLFVGASLHMKFRERFVDYL" misc_feature 1104063..1104848 /locus_tag="lmo1074" /note="ABC-type polysaccharide/teichoic acid/polyol phosphate export permease [Carbohydrate transport and metabolism]; Region: TagG; COG1682" /db_xref="CDD:441288" regulatory 1104850..1104855 /regulatory_class="ribosome_binding_site" gene 1104863..1105864 /locus_tag="lmo1075" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986506" CDS 1104863..1105864 /locus_tag="lmo1075" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="teichoic acid ABC transporter ATP-binding protein" /protein_id="NP_464600.1" /db_xref="GeneID:986506" /translation="MDKNIKVSFKHVSKEYDLYQNKSDKIKGLFLPKSKRVQSFWALR NVCFDVYDGETVGLIGINGSGKSTISNIMSGVIPPTQGEVVINGETSLIAIAVGLKGP LSGLENIRLKLLMHGLKGSQIDSLLPSIIEFADIGDFINQPIKNYSSGMRSRLGFAIS VHTDPDILVVDEALSVGDQTFYQKCVDKINEFKAQGKTIVFVSHSLGQVKSLCDKIIW MHHGEVREIGDAAEVAEKYDEFVKWFNKQPNDFKKKYQKEQKEKQKLPQEKIYPTPNA NKYKMGLFDKCFLVVLLALLVLFGSLISTGKSFMGLFSATDNKVEQVTKVDKRTDWK" misc_feature 1104881..1105597 /locus_tag="lmo1075" /note="ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism]; Region: TagH; COG1134" /db_xref="CDD:440749" regulatory 1105871..1105903 /regulatory_class="terminator" regulatory 1106029..1106034 /regulatory_class="ribosome_binding_site" gene 1106041..1107759 /locus_tag="lmo1076" /db_xref="GeneID:986264" CDS 1106041..1107759 /locus_tag="lmo1076" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="autolysin" /protein_id="NP_464601.1" /db_xref="GeneID:986264" /translation="MIKKVFHFILVLMLSVSIIPLFHAKAAETTNGVDSSEQEDNTEV AREEMPPESEEPVFSLEQNRDDAMAALVVPQTRNSFLRAASTPTFQQTFINSISTQAM DLCKKYNLYPSVMIAQAALESNWGRSELGKAPNYNLFGIKGSYNGKSVTMKTWEYSDS KGWYQINANFAKYPSHKESLEDNAKKLRNGPSWDSSYYKGAWRENAKTYKDATAWLQG RYATDNTYASKLNTLISSYNLTQYDTLYDTIKQQKNVSEDAKVVKADGHGVYSGIYNT SAASAKKLSTGAPYNNKDVKILKEGTTSRGTWVQFSLNNKVIGWMDKRAFVYYPKATN VKTLNLTGKITAGSTNGLWSEVPGTVNAKKLATTAGAYQNKDAKIIKQGQISGRTYYQ FQVGGKTIGWLDARAFHVYDKIQSQSNVNWNRTILNADKHGVYSGVYNTSSSSMNKLS TGAKYNNKKVKVIKQAKTARGTWYQFQVNGKTVGWMDYRAFFDTITSQKTMNKTVTVG NATNHGVFDGVYRTSPTVKRISLGKPYNNKKVKVLKEAVTDHATWVQFKYGNTTAWMD KKAFKY" misc_feature 1106077..1106763 /locus_tag="lmo1076" /note="Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility]; Region: FlgJ; COG1705" /db_xref="CDD:441311" misc_feature 1106779..1107018 /locus_tag="lmo1076" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 1107031..1107273 /locus_tag="lmo1076" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 1107274..1107513 /locus_tag="lmo1076" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 1107517..1107753 /locus_tag="lmo1076" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" regulatory 1107767..1107795 /regulatory_class="terminator" regulatory 1107960..1107965 /regulatory_class="ribosome_binding_site" gene 1107975..1109663 /locus_tag="lmo1077" /db_xref="GeneID:986263" CDS 1107975..1109663 /locus_tag="lmo1077" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="teichoic acid biosynthesis protein B" /protein_id="NP_464602.1" /db_xref="GeneID:986263" /translation="MSNSKFIITELYWERIQLHVKGKIENISLENYTFSFRTLTDEFH FSPTGIKLEGNTFDLRFNIAILNDGNYLPSGDYLLSLYNSETADEIVAQPAAELYKFP EDEDLLEELNEAKTENEKNNVLLAGLRKEFKRGGANLKYTYKVTPMISADVNEFVFSV SFTIPVPKPTKWQVFKNKIKEMYHTFSFNFRTGLFKSIFYTSQALVPKNGKRILFSSD SRAEIGGNFEFVLNKMKEMGIDKDYKIKMTFKPNIRLRRAFIEKFRFPFLLGSSDIIF IDDYHPMIYTIDFSEKTQVIQLWHACGAFKTVGFSRSGKQGGPFFDDRAHRNYTRAIV ASDTDIPFYAEAFGIKESSILPTGVPRTDIFFDPEYKRNIVTTMEQLFPETQGKQVIL FAPTFRGNGANQAHYPYFKINLAKFAEYCRKNNSVVIFKMHPFIKNEFIIPEQYADVF IDASSYREVNDILFITDILITDYSSVIFEFSTLQRKMLFYAFDLEDYVSTRDFYEEYE GFVPGKIVYDFEALIKALEMNDFEQEKVKPFLDKHFKYQDTNSAKRIVEEIFKK" misc_feature 1108545..1109651 /locus_tag="lmo1077" /note="CDP-glycerol glycerophosphotransferase, TagB/SpsB family [Cell wall/membrane/envelope biogenesis, Lipid transport and metabolism]; Region: TagB; COG1887" /db_xref="CDD:441491" regulatory 1109669..1109699 /regulatory_class="terminator" regulatory complement(1109669..1109699) /regulatory_class="terminator" gene complement(1109705..1110577) /locus_tag="lmo1078" /db_xref="GeneID:984367" CDS complement(1109705..1110577) /locus_tag="lmo1078" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="UDP-glucose pyrophosphorylase" /protein_id="NP_464603.1" /db_xref="GeneID:984367" /translation="MKVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQFIVEEA VASGIEDILIVTGKGKRAIEDHFDSVPELENNLREKNKLDLLHLVEETTNINLHFIRQ SKPKGLGDAILQAKGFIGNEPFVVMLGDDIVQSKTPCAKQLIDQYEKTHSSVIGVQNV PREETYRYGIIDPDKEVSDRLYNVTGFVEKPNVEDAPSNLAILGRYLLTPEIFKYLET QEAGSGGEIQLTDAINRLNEIQPVFAYDFEGERFDVGDKFGFIETTLKFALKHPEIKD DVRDLIIRLGDELK" misc_feature complement(1109723..1110577) /locus_tag="lmo1078" /note="UTP-glucose-1-phosphate uridylyltransferase [Cell wall/membrane/envelope biogenesis]; Region: GalU; COG1210" /db_xref="CDD:440823" regulatory complement(1110584..1110589) /regulatory_class="ribosome_binding_site" regulatory 1110757..1110762 /regulatory_class="ribosome_binding_site" gene 1110769..1113627 /locus_tag="lmo1079" /db_xref="GeneID:986262" CDS 1110769..1113627 /locus_tag="lmo1079" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464604.1" /db_xref="GeneID:986262" /translation="MEDVRKKWKKVQWDNEITYKTFLTYSVLFVLVTISIYLLFWLRG YSFIWSHDGFNQHYPILKEFRNMLVDFLKHPTQVPELWSWQIGMGGDVVGSFGYYVLG DIFAYLVVLFPADQMELAYTTLILLRLFCVGIAFLALAKNFKINHIAAVTGSLVYVFS GYLFVSATRHPFFITPMILLPLLCLCVERVLQKKSPVPLILVICWTLVSNFYFAYMLA IMVCIYTVIRYFTHYKKQGIPLLSTIGKLAVYAITGFLMACILFLPNLIAFLGSSRAN GEFANGLWFYDLSYYLSLGKMYITTESAGYWANLGFAAIAVFVLPFIWQYRKKYPVVF ISLVLGLGMMLFPFFGALFNGLSSPSNRWMFAVALPVSIGVSFLLTDYKTLTKKDMRN FLITLIIFIVVSWWGPNFNIYQPILLVPLTLMLLTFFVFFLQFINLNYIKKKAYNGLF YFLIIMLVCVNLAYMGNYMFSKNGANKVQGQLNSGVVERKITELYGGADKKIDKSSFY RTSLSSGYNGFYDNSDANILLDVNTVNSFYSITNGAVADLASELNNSQFRMTLPLGQM DNRTIFTNILGTTYLFARDDQAGRIPYGFKKIDSAEIERVDKPGISHTDVYESENSVP LMYMNYHTEDRESYEKLSPLEKEEALSYNAIIDNKDTSKREYKSNIKELEFETSIPKV NGKAPAKLTKDKIEVSNAENSIQFKLKNPEETKNAELYFYIDGLDFTPYTFKQRKDIA FAKDEYKTKNMRYNYYRNNLTKRIKEDYTLTAKTSNRVVSASQVDKSELSGYFKRDNM LLNGGFSEKARKQVSINLSGLGTYDYDNIKIYAVPFDDSYTKRMQELKKQAATDLKFD TNKVSAKVSAKQDGVLVTTIPYTKGWKVKVDGKEVSTEKVNTGFIGFSLDKGLHTIEM NYETPMLKAGMVASGLGVILFAGIIVVYHLRKRKNKTQ" misc_feature 1110793..1113621 /locus_tag="lmo1079" /note="Uncharacterized membrane protein YfhO [Function unknown]; Region: YfhO; COG4485" /db_xref="CDD:443579" regulatory 1113639..1113669 /regulatory_class="terminator" regulatory 1113748..1113753 /regulatory_class="ribosome_binding_site" gene 1113759..1115630 /locus_tag="lmo1080" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986254" CDS 1113759..1115630 /locus_tag="lmo1080" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="teichoic acid biosynthesis protein GgaB" /protein_id="NP_464605.1" /db_xref="GeneID:986254" /translation="MRNLKDRVLNSLKGNKKDIKISVVVPTYNTELEGLKNLMASIDK QTMNPDEYELVFVDDGSTTDTYERLQEFAETRPNMTVKQIENSGWGSRPRNIATKMAK GEYILYLDHDDTVFPETFERVYNFGKENNLDVVSGKEVRTNGWSWGWKQFSENNPHAE EMGIECLLPMTPHKFYKREFLLENDITFDDGARVLWEDVYFNSKAFIHGAKVGILADY PTYYWIATGANNSSSFGRDPHEKWNQINKLFNFFKDNIKEQRDLDFMLTHWYRSRVLG ILGQWLLKNNNERIDIEFNYAKKLAEELIPAYISENLDKNNQVKDYLLRQGDLDSLKK LAQIDAGITALSYVEDAYFKEDKLFFKTSTKMTYEDKEDFFIEKTADRMERILPEEIK SKLPKEFFDYSDDLAEFTYEPSIKGRNSRATWKIDGSTSNVEVVNKKANLYKIEGEMS FSVQINDYILDAADKKQPWDIATRFTGLGYTSHRALTIGKILIKTALINNKTMIVYKN ASGLISLDVGSSVRSIVEDSGVKREQILIDKTSGKVTIPLNEIHVFGESLIEGNAELK PVGISDADPINVKAKLIGEANKARVEVLLGDEKLSGEYHLVTNIQGKKDKQQIKITL" misc_feature 1113816..1114424 /locus_tag="lmo1080" /note="Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; Region: WcaA; COG0463" /db_xref="CDD:440231" regulatory 1115634..1115639 /regulatory_class="ribosome_binding_site" gene 1115647..1116513 /locus_tag="lmo1081" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986258" CDS 1115647..1116513 /locus_tag="lmo1081" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate thymidyl transferase" /protein_id="NP_464606.1" /db_xref="GeneID:986258" /translation="MKGIILAGGSGTRLYPLTKAISKQMLPIYDKPMIYYPLSILMLA GIKDILIISTPEDTPRFEQLLADSDQLGINISYAVQEKPEGLAQAFIIAEDFIGDDSV SLILGDNIYYGQGLSKMLQRASAKKAGATVFGYHVNDPERFGVVEFDESMKAISIEEK PTEPKSNYAVTGLYFYDNRVVEIAKSIKPSERGELEITDVNKRYLELGELDVELMGRG FAWLDTGTHESLLEASTFIETIERRQNLKIACLEEIAYRMGYIDEAAVEKLAEPLKKN AYGQYLMKLINK" misc_feature 1115647..1116507 /locus_tag="lmo1081" /note="dTDP-glucose pyrophosphorylase [Cell wall/membrane/envelope biogenesis]; Region: RmlA1; COG1209" /db_xref="CDD:440822" regulatory 1116519..1116524 /regulatory_class="ribosome_binding_site" gene 1116532..1117092 /locus_tag="lmo1082" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986259" CDS 1116532..1117092 /locus_tag="lmo1082" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dTDP-sugar epimerase" /protein_id="NP_464607.1" /db_xref="GeneID:986259" /translation="MEIVESKLAGVKLVKPKVFGDHRGFFMESYNEKAFHEAGIDMKF IQDNHSLSVEAGVLRGMHYQTNPKAQTKLIRVATGAIYDVVVDMRKGSPTYGEWEGYI LSEANKHQLLVPQGFAHGFCTITENVNVLYKVDQLYSPENDAGIAYDDPDLNITWPTD KLILSDKDTKHPRLKDAENNFVWENK" misc_feature 1116532..1117062 /locus_tag="lmo1082" /note="dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme [Cell wall/membrane/envelope biogenesis]; Region: RfbC; COG1898" /db_xref="CDD:441502" regulatory 1117079..1117084 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1082" gene 1117093..1118079 /locus_tag="lmo1083" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986257" CDS 1117093..1118079 /locus_tag="lmo1083" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dTDP-D-glucose 4,6-dehydratase" /protein_id="NP_464608.1" /db_xref="GeneID:986257" /translation="MNLLVTGGAGFIGSNFVHHILNKHDDYKVVNLDLLTYAGTMSNL EDIKENPNHVFVEGNICDYDLVKKLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNV QGTLNLLNVAKELNVAKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLL VRSYFETYGLNVNITRCSNNYGPHHFPEKLIPLMITNGLDGENLPIYGDGKNIRDWLH VSDHCAAIDLVIHNGKSGEVYNVGGHNERTNNEIVHIIVDDLNLSKDKIVYVEDRLGH DLRYAIDPKKIETELGWEPKYTFDTGIKETIEWYVNNEAWWRPLKSRAKLGE" misc_feature 1117093..1118064 /locus_tag="lmo1083" /note="dTDP-D-glucose 4,6-dehydratase [Cell wall/membrane/envelope biogenesis]; Region: RfbB; COG1088" /db_xref="CDD:440705" regulatory 1118067..1118074 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1083" gene 1118082..1118912 /locus_tag="lmo1084" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986256" CDS 1118082..1118912 /locus_tag="lmo1084" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DTDP-L-rhamnose synthetase" /protein_id="NP_464609.1" /db_xref="GeneID:986256" /translation="MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKAAVK KAMLDLKPEWIIHCAAFTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYIST DYVFDGTKKEAYLPDDKTNPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFGKYGNNF VYSMLKLAETHKELKVVNDQLGRPTYTYDLADFIRFVIEKNPAYGIYQFSNSGTATWF EFATEILKDKDVTVNPCTSDEFPQKAERPKTSIMSLEKVEKLGFNIPTWQDALVRFKK " misc_feature 1118088..1118909 /locus_tag="lmo1084" /note="dTDP-4-dehydrorhamnose reductase [Cell wall/membrane/envelope biogenesis]; Region: RfbD; COG1091" /db_xref="CDD:440708" regulatory 1118922..1118948 /regulatory_class="terminator" gene 1118932..1121022 /locus_tag="lmo1085" /db_xref="GeneID:986253" CDS 1118932..1121022 /locus_tag="lmo1085" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="teichoic acid biosynthesis protein B" /protein_id="NP_464610.1" /db_xref="GeneID:986253" /translation="MHSYNCFFISLWGLFVYNSNVYKLLYEQKEPDILNDSRDLHSIC FVSTEVEDKNNNVHFIAESADLLADCLVLLEKENKHYLTFMKENLNTIALAEKIEYAP DIICPNKVLKGSLYTNPECIDNSLAGSTFSKDLLKRVANEMKQEVFELTSFNYYCYHL AEKIGHLGEEASYSLSLADLDDSVTRLLDIKDNHYRKDWTILYYVNKFLMMHLENLPK IFEESDEKFQINYLEKLTELIAKLPDEVIFELDALDYLVQNILNDSFEWIKYEAYPAC LTLAEIISHRAAPNKFTDTKWLCLEKCVRKGSVNPLRNKKNPTVLTPIKKKFVSFFSR KVVFTIAKLLPVAKDNVLLVSNKISDLDATFMPIYQTIKQKHPEKSVRAYMKMRPEDN HAMYYLTYFWNLGRAKYVFLDDYYYQLYSIRMRKEAEVIQLWHAAGAFKRFGHSSLGF KDSISLDFETRAHQNYTTSVISSSDLKPIYAEAFHMDETKIEAFGLPRLWKLFDQDYK EFRLDYFQKMYPLLKGKKVITYAPTFRGNSEERKAFQLELNLRKMKEELGQEYVVVIK LHPLVSVETQVPEDLADFVLDFSGIEMNDVLIVTDILITDYSSVIYDYSILNRPIIFY AYDLEAYSLERNFYHDYLEFVPGPVVATTEEAIKLIQTNQMITGKLQDFAEKAFEYHD GDAAARIIDYVMQD" misc_feature 1119922..1121010 /locus_tag="lmo1085" /note="CDP-glycerol glycerophosphotransferase, TagB/SpsB family [Cell wall/membrane/envelope biogenesis, Lipid transport and metabolism]; Region: TagB; COG1887" /db_xref="CDD:441491" regulatory 1121086..1121091 /regulatory_class="ribosome_binding_site" gene 1121098..1121808 /gene="ispD" /locus_tag="lmo1086" /db_xref="GeneID:986270" CDS 1121098..1121808 /gene="ispD" /locus_tag="lmo1086" /EC_number="2.7.7.60" /experiment="EXISTENCE:[PMID:19448609]" /note="4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers" /codon_start=1 /transl_table=11 /product="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" /protein_id="NP_464611.1" /db_xref="GeneID:986270" /translation="MIYAEILAGGKGTRMGNVNMPKQYLPLKGKPIIVHTIEKFILND RFEKIIIATPKDWINHTQDIIKKYIFDSRVIVIEGGTDRNETIMNGIRYVEKEFGLNE DDIIVTHDAVRPFITHRIIEENIDMALEFGSVDTVIPAVDTIVESTNHDFITDIPVRG NIYQGQTPQSFNMKTIQKHYNNLTDDEKQILTDACKICLLAGEKVKLVNGGISNIKIT TPYDLKVANAIVQERINS" misc_feature 1121098..1121802 /gene="ispD" /locus_tag="lmo1086" /note="D-ribitol-5-phosphate cytidylyltransferase; Region: ispD; PRK00155" /db_xref="CDD:234670" misc_feature order(1121116..1121118,1121122..1121139,1121161..1121163, 1121335..1121346,1121353..1121355,1121425..1121433, 1121743..1121745) /gene="ispD" /locus_tag="lmo1086" /note="substrate binding site [active]" /db_xref="CDD:133009" misc_feature order(1121434..1121436,1121491..1121493,1121515..1121517, 1121521..1121523,1121575..1121592,1121671..1121676, 1121680..1121685,1121692..1121694,1121707..1121718, 1121728..1121733) /gene="ispD" /locus_tag="lmo1086" /note="dimer interface [active]" /db_xref="CDD:133009" regulatory 1121791..1121796 /regulatory_class="ribosome_binding_site" /gene="ispD" /locus_tag="lmo1086" gene 1121805..1122830 /locus_tag="lmo1087" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985892" CDS 1121805..1122830 /locus_tag="lmo1087" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glucitol dehydrogenase" /protein_id="NP_464612.1" /db_xref="GeneID:985892" /translation="MINQVYRLVSERQFEEANIEEALTEDVVVVRPTYLSICAADQRY YTGSRGKEMLSKKLPMALIHEGVGQVTYDATGEFEIGTKVVMIPNTPTEDDPVIAENY RRSSLFRSSGYDGLMQENVFMRRDRVVRLPENMDMEVAAYSELISVAFHAITRFKQKA NANQSVFGVWGDGNLGFITCLLLKTIYPESKVIIFGKTQYKLDFFSFVDEAHLVDEIP EGLVIDNAFECAGGKGSQYAVEQIIDLIKPEGTISLLGVSENPIEFNSRMVLEKGLTV FGSSRSGKEDFQNTVNFLSENERAVEYLSSLIGQRKVVRNLQDIIEAFETDLRNPFGK TVMEWKV" misc_feature 1121805..1122827 /locus_tag="lmo1087" /note="ribitol-5-phosphate dehydrogenase; Region: ribitol-5-phosphate_DH; cd08237" /db_xref="CDD:176199" misc_feature order(1121916..1121924,1121931..1121933,1122234..1122236, 1122246..1122248,1122315..1122332,1122390..1122395, 1122405..1122407,1122444..1122446,1122489..1122494, 1122498..1122500,1122567..1122572,1122639..1122647) /locus_tag="lmo1087" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176199" misc_feature order(1121916..1121918,1121922..1121924,1121994..1121996, 1122234..1122236) /locus_tag="lmo1087" /note="putative catalytic Zn binding site [ion binding]; other site" /db_xref="CDD:176199" regulatory 1122908..1122913 /regulatory_class="ribosome_binding_site" gene 1122918..1124078 /gene="tagB" /locus_tag="lmo1088" /db_xref="GeneID:986255" CDS 1122918..1124078 /gene="tagB" /locus_tag="lmo1088" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="teichoic acid biosynthesis protein B" /protein_id="NP_464613.1" /db_xref="GeneID:986255" /translation="MIVKNIAISMYMFLLSLFSFFSRFFGVKKRVLIMASFPENTTAI LNQMKKMGYTPNTICFHTERVQFNTKELDFVRFSPNNLANKWKLMFYLNTSKVILVDN YYPELAAVSFKDGVECIQLWHANGALKQFGWEDNSISERSDADKKRFKAVYEHFLKVV VGSDEMGEIFKRSFLLNESHLLKIGVPRTDVYFEESLQQQKRIEWRNKFHAENKKVIL YAPTFRDNELAEAKLVMDFNAMERAFSEDYLLVLKLHPAVKIDVQSLNTDFIINVDKN VALEELLAAVDILITDYSSIPFEFALFERPIYFFSYDMEKYDKERGLIKNYQEIIPGP ISQTTAELIEQIKTKATSETLALFSKKWNKYSDGHASERMVVYMKQLMEEAK" misc_feature 1122999..1124042 /gene="tagB" /locus_tag="lmo1088" /note="CDP-glycerol glycerophosphotransferase, TagB/SpsB family [Cell wall/membrane/envelope biogenesis, Lipid transport and metabolism]; Region: TagB; COG1887" /db_xref="CDD:441491" regulatory 1124065..1124070 /regulatory_class="ribosome_binding_site" /gene="tagB" /locus_tag="lmo1088" gene 1124079..1124462 /gene="tagD" /locus_tag="lmo1089" /db_xref="GeneID:986249" CDS 1124079..1124462 /gene="tagD" /locus_tag="lmo1089" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate cytidylyltransferase" /protein_id="NP_464614.1" /db_xref="GeneID:986249" /translation="MKKVITYGTFDLLHWGHIHLLKRAKALGDYLIVAISSDEFNRIK HKEAYHSYEHRKLIIEAIRYVDEVIPENNWEQKRDDIEKYGIDVFVMGDDWEGEFDFL KDVCEVVYLPRTEGISTSQIKDELK" misc_feature 1124079..1124459 /gene="tagD" /locus_tag="lmo1089" /note="glycerol-3-phosphate cytidylyltransferase; Region: G3P_Cytidylyltransferase; cd02171" /db_xref="CDD:173922" misc_feature order(1124097..1124108,1124118..1124120,1124124..1124129, 1124136..1124138,1124184..1124186,1124196..1124198, 1124208..1124210,1124214..1124216,1124289..1124291, 1124307..1124309,1124349..1124354,1124358..1124363, 1124373..1124375,1124415..1124420,1124427..1124429) /gene="tagD" /locus_tag="lmo1089" /note="active site" /db_xref="CDD:173922" regulatory 1124469..1124474 /regulatory_class="ribosome_binding_site" gene 1124484..1125467 /locus_tag="lmo1090" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986248" CDS 1124484..1125467 /locus_tag="lmo1090" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycosyltransferase" /protein_id="NP_464615.1" /db_xref="GeneID:986248" /translation="MEPLVSVIIPVYNVEKYVKRCLDSVLEQTYHNLEVIVVNDGATD NSAKVIKSISDNRIRYFEKENGGQATARNFGLDVATGDYIVMVDSDDYISKNLVETCL DTVQKTNADLVLFTSYNVNQEGKMQYIKRDKGIKVLDAGPTPWNKFYQADLWKGSRFP VGYWYEDLGIIPVVTLKAKNPVKIQDALYYYITDRADSQSNIQQVDHFLDVVIMLENV ETELKKLGIYEESKDQLAYLYIEHLIYRLVLRKAIYITNKQERKKLIKKISTIIQEKF PNWGSYPYQAGGKLTATLKKKALWLYLHHLYLLGDLVWKYPFSIRSKQTGF" misc_feature 1124490..1124996 /locus_tag="lmo1090" /note="Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; Region: WcaA; COG0463" /db_xref="CDD:440231" regulatory 1125468..1125473 /regulatory_class="ribosome_binding_site" gene 1125482..1126495 /locus_tag="lmo1091" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986251" CDS 1125482..1126495 /locus_tag="lmo1091" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glysosyltransferase" /protein_id="NP_464616.1" /db_xref="GeneID:986251" /translation="MHKLSVVIAVYNVSEYIEACLTSVLEQNYKNVELIIVNDGSTDD TFQKVEKLVDGHTNVILIDQENQGVSAVRNNGVKAATGDYLGFVDGDDIIAKDMFQKM MDSFEMSDADMVTIGVARLSGDKVYPSTLHERYMVEKKEATTIEETPALLYDTTSWNK VFKKSFWDKHHLEFPEGQMYEDIALMIPAFLYAEKVNIIPDVGYYWRSREGGAKSITQ RRNDIAMVNDRLLALKKVNQVLNEKNIQGDLRYQNERKNFEIDLFSMIEWAFLAPKDY YLALQPLIKNYVEQEMKTTALNDIPKEKKRLFKALLANNRPAFLLNSYIYFGKKAVKK ITK" misc_feature 1125482..1126114 /locus_tag="lmo1091" /note="Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; Region: WcaA; COG0463" /db_xref="CDD:440231" regulatory 1126691..1126696 /regulatory_class="ribosome_binding_site" gene 1126704..1128194 /locus_tag="lmo1092" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986245" CDS 1126704..1128194 /locus_tag="lmo1092" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate" /codon_start=1 /transl_table=11 /product="nicotinate phosphoribosyltransferase" /protein_id="NP_464617.1" /db_xref="GeneID:986245" /translation="MTNLFQDDSLTLHTDLYQLNMMKAYFDDGLHERRSVFEVFFRDM PFDSGFVVFAGLERIIHYMQNLRFTETDIAYLHDELGFDGPFLEYLRNFKFKGNILAA KEGEFVFKTEPILQVEASLAEAQLIETALLNIVNFQTLIATKAARIRSVIDDETFAEF GTRRAQEMDAAIWGTRAAYIGGCDSTSNVRAGKIFGIPVSGTMAHAMVQAYRDELEAF RSYAKTHFDSIFLVDTYDTLKSGVPNAIKVAKEMGDKINFIGIRLDSGDMAFLSKKAR QMLDEAGFTEAKIFASSDLDEHTILSLKAQKAKIDSWGVGTKLITAYDQPALGAVYKM AAIADENDILQDSIKLSSNTEKVSTPGKKKVYRIITNEDGLKAEGDYIALADESLENV DKLTMFHPVHTYIMKTVENFTARELLVPIFQNGELVYDMPSLDEIKAYKEENLALLWD EYKRTVRPEQYPVDLSVKCWKNKMRNIEKVRKSVQLHSPVELDMPF" misc_feature 1126710..1128110 /locus_tag="lmo1092" /note="nicotinate phosphoribosyltransferase; Validated; Region: PRK09243" /db_xref="CDD:236426" misc_feature order(1127187..1127195,1127259..1127264,1127493..1127495, 1127577..1127582,1127643..1127645,1127649..1127654, 1127661..1127663) /locus_tag="lmo1092" /note="active site" /db_xref="CDD:238804" regulatory 1128193..1128198 /regulatory_class="ribosome_binding_site" gene 1128206..1129030 /gene="nadE" /locus_tag="lmo1093" /db_xref="GeneID:986246" CDS 1128206..1129030 /gene="nadE" /locus_tag="lmo1093" /EC_number="6.3.1.5" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers" /codon_start=1 /transl_table=11 /product="NAD synthetase" /protein_id="NP_464618.1" /db_xref="GeneID:986246" /translation="MEIRERILADMQVAETIDAHEEIRKSVEFLKAYLKKNTFLKSFV LGISGGQDSTLTGKLAQMAISEMRAETGDDEYRFFAVSLPYGTQLDESDRQDALNFME PDNRLTVNIKASVDASVAALAEAGVELSDFAKGNEKARERMKVQYAIAAMHKGVVVGT DHSAEAVTGFYTKYGDGGTDINPLFRLNKRQGKALLKELGCPEHLYLKKPTADLEDNK PALPDEVALGVTYDQIDDYLEGKEVPADAAAKIENWFIKTEHKRHMAITIFDDFWK" misc_feature 1128209..1129015 /gene="nadE" /locus_tag="lmo1093" /note="ammonia-dependent NAD(+) synthetase; Region: nadE; PRK00768" /db_xref="CDD:234831" regulatory 1129029..1129034 /regulatory_class="ribosome_binding_site" gene 1129043..1129351 /locus_tag="lmo1094" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986243" CDS 1129043..1129351 /locus_tag="lmo1094" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1094" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464619.1" /db_xref="GeneID:986243" /translation="MKVGYGLLTAFYTHPGERDHLVKILLEAAESLEEYNTCIQYIVS ESENEADTVFVSEIWVDKGHHEASLDNPAVKATIERAKPLIKEVKRIQELDILGGKGV " misc_feature 1129055..1129327 /locus_tag="lmo1094" /note="Quinol monooxygenase YgiN [Energy production and conversion]; Region: YgiN; COG1359" /db_xref="CDD:440970" regulatory 1129367..1129402 /regulatory_class="terminator" regulatory 1129398..1129403 /regulatory_class="ribosome_binding_site" gene 1129412..1129816 /locus_tag="lmo1095" /db_xref="GeneID:986241" CDS 1129412..1129816 /locus_tag="lmo1095" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS cellbiose transporter subunit IIB" /protein_id="NP_464620.1" /db_xref="GeneID:986241" /translation="MQTLMIVCAGGATSSLMAQNVVKSATSEGMDAVLLFPDDVKYKD SFREKYSTRDLVVVMGPVGAITAGKFRDYKEQVDAVLVAPQVKYMYKTVEEVLGELNI PCANINSLDFGRMRGDKILTQGLALMNAKNSK" misc_feature 1129418..1129798 /locus_tag="lmo1095" /note="Phosphotransferase system cellobiose-specific component IIB [Carbohydrate transport and metabolism]; Region: CelA; COG1440" /db_xref="CDD:441049" regulatory 1129936..1129941 /regulatory_class="ribosome_binding_site" gene 1129945..1131501 /gene="guaA" /locus_tag="lmo1096" /db_xref="GeneID:986238" CDS 1129945..1131501 /gene="guaA" /locus_tag="lmo1096" /EC_number="6.3.5.2" /function="converts ATP and xanthosine 5'-phosphate and L-glutamine and water to AMP and pyrophosphate diphosphate and GMP and L-glutamate" /experiment="EXISTENCE:[PMID:19448609]" /note="contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway" /codon_start=1 /transl_table=11 /product="GMP synthase" /protein_id="NP_464621.1" /db_xref="GeneID:986238" /translation="MFKIMKDFTEQEKIIVLDFGSQYNQLITRRIREFGVYSELHPHT ITVEEMKALNPTGIIFSGGPNSVYDEDAFRADERIFDMGIPILGICYGMQLMTTHFGG KVERAKDREYGKADIHVEKPNRLFAGLPTDQVVWMSHGDLVVEEPAGFEVTVTSKSCP IAGIADEERSLYGVQFHPEVRHSVYGNELLKNFALNVCGCKGDWTMENFSEVEIAKIQ EIVGDKKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGEADQVMETLQGE FNMNIIKVDAKKRFMDKLAGVSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTLY TDIIESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTELGMPDAIVW RQPFPGPGLGIRVLGEITEEKLEIVRDSDYILREEIKNAGLEREIWQYFTALPNIRSV GVMGDGRTYDHTVVVRAVTSIDGMTADWARIPWDVLEKISVRIVNEVDHVNRVVYDIT SKPPATVEWE" misc_feature 1129975..1131498 /gene="guaA" /locus_tag="lmo1096" /note="GMP synthase; Reviewed; Region: guaA; PRK00074" /db_xref="CDD:234614" regulatory 1131510..1131557 /regulatory_class="terminator" gene complement(1131558..1132760) /locus_tag="lmo1097" /db_xref="GeneID:986237" CDS complement(1131558..1132760) /locus_tag="lmo1097" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="integrase" /protein_id="NP_464622.1" /db_xref="GeneID:986237" /translation="MTNDQIKKAKNGTYYFRANLGYDVKGKKIQKYRSGFKTKKEARE EYSRLLLMNPDDLNENKDKMMFEYYINEIFLPWYKTQVKLRTYENRIPTIQKHFPYFY KMAVSDIEPINVQDWQLKMTKNLKPSYVRAVQGLFSVAMDRAIVLGITTTNPSKIIGN VKKVKPKVEFWTKEEFEKVLSLIYKEDYYQNFLFISLWFLFMTGMRIGEATAIQWEDI DFETGVVSITKTLYYKSQIDYKFVEPKTKASVRHIVLDKVTLSYLADWREVQQNVVKT NFVMSYNGIPTQKHTIAHAIDRFSKMAGIHRIKIHALRHSHASLLISMGENPLIIKER LGHEDIETTLGTYGHLYPNSNFEVASKLNGIISFQPAEQNLDSSPKNQFTVNYRQNKQ PNSAIKVQ" misc_feature complement(<1132629..1132724) /locus_tag="lmo1097" /note="Arm DNA-binding domain; Region: Arm-DNA-bind_4; pfam14657" /db_xref="CDD:464242" misc_feature complement(1131672..1132547) /locus_tag="lmo1097" /note="Site-specific recombinase XerD [Replication, recombination and repair]; Region: XerD; COG4974" /db_xref="CDD:443999" regulatory complement(1132768..1132773) /regulatory_class="ribosome_binding_site" gene complement(1132787..1132987) /locus_tag="lmo1097a" /db_xref="GeneID:16695813" CDS complement(1132787..1132987) /locus_tag="lmo1097a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475635.1" /db_xref="GeneID:16695813" /translation="MVTVTKQDLIKLGYGNSFSADIIKKAKELMISRGHTYYQSRKLD RVPREAVEELLGIKFSNENRSD" misc_feature complement(1132814..1132981) /locus_tag="lmo1097a" /note="Domain of unknown function (DUF3173); Region: DUF3173; pfam11372" /db_xref="CDD:402810" gene complement(1133466..1133696) /locus_tag="lmo1098" /db_xref="GeneID:986233" CDS complement(1133466..1133696) /locus_tag="lmo1098" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464623.1" /db_xref="GeneID:986233" /translation="MKSTKEVLPFVVILQAVNGDVNAINQILKHFEHYIIRLSQKTLF DEYGNAYIHVEEEIKRMLETKLITAVLKFELS" misc_feature complement(1133475..1133669) /locus_tag="lmo1098" /note="Helix-turn-helix domain; Region: HTH_16; pfam12645" /db_xref="CDD:463654" gene complement(1133698..1134117) /locus_tag="lmo1099" /db_xref="GeneID:986219" CDS complement(1133698..1134117) /locus_tag="lmo1099" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464624.1" /db_xref="GeneID:986219" /translation="MTTTSNYEKTIEHQFDSFCKTVVRNFARDIYDENKRRNERLISL EALSMAELSQLSIFDDYDSNYIIMASYDYDIRIEDVLIAQAIGKLTKRKQDIILLSFF LSMTNADIATLMDLAESTVHYHKTNALKELKKLMEEH" misc_feature complement(1133701..>1134084) /locus_tag="lmo1099" /note="DNA-directed RNA polymerase specialized sigma subunit, sigma24 family [Transcription]; Region: RpoE; COG1595" /db_xref="CDD:441203" regulatory complement(1133706..1133711) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1099" regulatory complement(1134127..1134132) /regulatory_class="ribosome_binding_site" gene complement(1134472..1136595) /gene="cadA" /locus_tag="lmo1100" /db_xref="GeneID:986725" CDS complement(1134472..1136595) /gene="cadA" /locus_tag="lmo1100" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cadmium resistance protein" /protein_id="NP_464625.1" /db_xref="GeneID:986725" /translation="MSKASKQTTYRVDGMSCTNCAGKFEKNVKNLEGVTDAKVNFGAG KISVYGETSISQIEKAGAFENLRVTDEKDYSSKPAKKESFLKKNWHLVVSIIFIILAF ISQNISGEDSTTTIILYVIAIVVGGFNLFKEGFANLIKLDFTMESLMTIAIIGASIIG EWAEGSIVVILFAFSEVLERYSMDKARQSIRSLMDIAPKEALIRRDDVEQMIAVSDIQ IGDIMIIKPGQKIAMDGVVIKGYSAINQSAITGESIPVEKKVDDEVFAGTLNEEGLLE VKVTKHVEDTTISKIIHLVEEAQGERAPAQAFVDKFAKYYTPTIMLIALLVVVVPPLF FGGDWDTWVYQGLSLLVVGCPCSLVISTPVSIVSAIGNSAKNGVLVKGGIYLEEIGGL QAIAFDKTGTLTKGKPVVTDFIPYSEHMDEQNSLSIITALETMSQHPLASAIISKAMI DNVDYKSIEIDNFSSITGKGVKGEVNGITYYIGSSKLFESSLEKSQSISQTYQSLQKQ GKTAMLFGTESNILAIIAVADEVRESSKEVIAQLHKLGIAHTIMLTGDNNDTAQFIGK EIGVSDIKAELMPEDKLTYIKELKQTYGKVAMIGDGVNDAPALAASTVGIAMGGAGTD TALETADVALMGDDLKKLPFIVNLSRKTLKIIKQNITFSLGIKLLALLLVLPGWLTLW IAIVADMGATLLVTLNGLRLMKVKK" misc_feature complement(1136389..1136571) /gene="cadA" /locus_tag="lmo1100" /note="Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain...; Region: HMA; cd00371" /db_xref="CDD:238219" misc_feature complement(order(1136536..1136538,1136545..1136553)) /gene="cadA" /locus_tag="lmo1100" /note="metal-binding site [ion binding]" /db_xref="CDD:238219" misc_feature complement(1134484..1136271) /gene="cadA" /locus_tag="lmo1100" /note="P-type heavy metal-transporting ATPase, similar to Staphylococcus aureus plasmid pI258 CadA, a cadmium-efflux ATPase; Region: P-type_ATPase_Cd-like; cd07545" /db_xref="CDD:319845" misc_feature complement(order(1134520..1134522,1134532..1134534, 1134595..1134600,1135528..1135530,1135534..1135536)) /gene="cadA" /locus_tag="lmo1100" /note="putative HM ion binding site [ion binding]; other site" /db_xref="CDD:319845" misc_feature complement(order(1134784..1134786,1134793..1134795, 1134850..1134852,1134859..1134861,1134868..1134870, 1134928..1134936,1135057..1135059,1135144..1135152, 1135198..1135200,1135396..1135404)) /gene="cadA" /locus_tag="lmo1100" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:319845" regulatory complement(1136602..1136607) /regulatory_class="ribosome_binding_site" regulatory 1136888..1136894 /regulatory_class="ribosome_binding_site" gene 1136900..1137400 /locus_tag="lmo1101" /db_xref="GeneID:986228" CDS 1136900..1137400 /locus_tag="lmo1101" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="lipoprotein signal peptidase" /protein_id="NP_464626.1" /db_xref="GeneID:986228" /translation="MKNKTIISKQNLVLIVIMVGATLTDQLSKIWITSNLQLGESIEI IPSFFKITYAQNTGAAWSILEGQMTFFYVITLVALILLGWYFYRLKDYQIIQKIGVAL MVSGTLGNFIDRLLFQYVRDSLDFHILGYNFPIFNVADVLLICGVLFIIIDEVLKSFG VSYKKM" misc_feature 1136933..1137373 /locus_tag="lmo1101" /note="Lipoprotein signal peptidase [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport]; Region: LspA; COG0597" /db_xref="CDD:440362" gene complement(1137533..1137868) /locus_tag="lmo1102" /db_xref="GeneID:987644" CDS complement(1137533..1137868) /locus_tag="lmo1102" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cadmium efflux system accessory protein" /protein_id="NP_464627.1" /db_xref="GeneID:987644" /translation="MNDICEITCFDEEKVQKIQTSLEDKKISDISQIFKALSEETRLT IAYALTLEKELCVCDISIIVKSTVATTSHHLKILSKAGVVQNKKIGKMVYYSLNNSLV ETLIKDIVL" misc_feature complement(1137551..1137781) /locus_tag="lmo1102" /note="metalloregulator ArsR/SmtB family transcription factor; Region: HTH_metalloreg; NF033788" /db_xref="CDD:411368" misc_feature complement(order(1137584..1137592,1137605..1137613, 1137629..1137634,1137638..1137643,1137650..1137655, 1137659..1137670,1137695..1137703,1137743..1137751, 1137761..1137766)) /locus_tag="lmo1102" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238042" regulatory complement(1137879..1137884) /regulatory_class="ribosome_binding_site" gene complement(1137997..1138914) /locus_tag="lmo1103" /db_xref="GeneID:986226" CDS complement(1137997..1138914) /locus_tag="lmo1103" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464628.1" /db_xref="GeneID:986226" /translation="MKIKIERKEKPDKPKKQKKIPTIKVGTHKKLTIALWVLLIGSMS FGIYKNFTAIDMHTVHEKEIIEKQVVDTNSIESFVESFSKEYFSWQQSQDSQSNRIER LKNYLTENLQQLNTEMVRSDIPTSSIVNSFQVWSVEQSSDTEYDVLFSVGQQITESEN KKNITSTYSVTVYVDEASNMVIIKNPTIDSKPQKASYEPVLSDSDGTVDANTTEEINS FLDTFFKLYPTATEKELSYYVSNQALDVINKDYVFVELVNPVYTQADNQVTAIVTVKY LDKETKVTQLSQFKIILQKNENWIIIKNN" misc_feature complement(1138009..1138683) /locus_tag="lmo1103" /note="Conjugative transposon protein TcpC; Region: TpcC; pfam12642" /db_xref="CDD:463652" regulatory complement(1138922..1138927) /regulatory_class="ribosome_binding_site" gene complement(1138930..1139940) /locus_tag="lmo1104" /db_xref="GeneID:986227" CDS complement(1138930..1139940) /locus_tag="lmo1104" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="P60 protein" /protein_id="NP_464629.1" /db_xref="GeneID:986227" /translation="MKLVKYFAIFGVVFSMFFSLLLFVTIVFAEEDDTRSSREEMIQQ GGLNVSAEVLAHRPMVEKYCKEFGIEEYVNYILAIMQVESGGTAEDVMQSSESLGLPP NSLSTEESIKQGCKYFSELLASAESNGCDINTVIQSYNYGGGFINYVASNGKKYSYEL AESFSKDKAGGVKVDYPNPIAIPVNGGWRYNYGNQFYVLLVSQYLTPVQFDDETVQAI MNEALKYEGYPYVFGGSSPSTSFDCSGLTQWSYAVAGIQLPRVAQAQYDATQHIPLSE AKAGDLVFFHSTYDAGSYVTHVGIYVGNNQMYHAGDPIGYTNLTDSYWQAHLIGAGRI IK" misc_feature complement(1139326..1139793) /locus_tag="lmo1104" /note="Lysozyme-like; Region: Lysozyme_like; pfam13702" /db_xref="CDD:433415" misc_feature complement(order(1139521..1139526,1139590..1139592, 1139647..1139649,1139656..1139664,1139692..1139694)) /locus_tag="lmo1104" /note="putative sugar binding site [chemical binding]; other site" /db_xref="CDD:381612" misc_feature complement(1138939..>1139307) /locus_tag="lmo1104" /note="Cell wall-associated hydrolase, NlpC_P60 family [Cell wall/membrane/envelope biogenesis]; Region: NlpC; COG0791" /db_xref="CDD:440554" gene complement(1139940..1142099) /locus_tag="lmo1105" /db_xref="GeneID:986240" CDS complement(1139940..1142099) /locus_tag="lmo1105" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464630.1" /db_xref="GeneID:986240" /translation="MRTKEERKARKIEKKQRIKQLPIYKKIIRYVLIAIIFFVILIIM LASVGTVAHAAGLVDETINTSNEYSKYGLGNYQLDFYVNNDWGWLPWNWSDGIGKSVS YGLYAITNFVWTISLYLSNATGYLVQEAYSLDFISKTVDSIGKNIQTIAGVTKNGFST SGFYVGFLLILIFILGIYVTYTGLIKRETTKAVRAVLNFIVVFILSASFIAYAPDYIG NINDFSKDISTSALDVGTKIVMPDTDSKGKDSVDMIRDSLFSVQVKQPWLLLQYGTTD VDSLGADRVESLLSTSPDTNNGEDREDIVITEIETFNNANLSISKTVSRLGTVFFLFI FNIGISVFVFLLTGMMIFSQVLFIIFAMFLPISFLLSMIPSFDGMGKKAIMKLFNVIM TRAGLTLVITVAFSISTMLYSLAGSSPFFMIMFLQIVTFAGIYFKLGDIMNMFSLQSN DSQSMGRQMFRKPRMFLNRQSRRLQRNVSRAIGKNSRSGKEKEAPTPTKTTKANHERQ NENGNESTANRPTSTKQNRSAGTRAGEKMGDLMEAKNRMVDKAGDMKDTIKNAPTNAK YAVHKGKRDLVRNVSEFSQSFADTRNLQQQERATKRNEKKATVAQRRQEMDKAKAEKS NLEPYASMQKRQRDYEERKQPVPRTAPTPAPQASTPKATPERTASTNQQHERPLQKQK NTTKEQVKANKRENTSTTSKNSKTENKITKTTTKRRK" misc_feature complement(<1140696..>1141127) /locus_tag="lmo1105" /note="Solute carrier families 5 and 6-like; solute binding domain; Region: SLC5-6-like_sbd; cl00456" /db_xref="CDD:444915" misc_feature complement(<1139952..>1140686) /locus_tag="lmo1105" /note="pneumococcal surface protein PspC, choline-binding form; Region: PspC_subgroup_1; NF033838" /db_xref="CDD:468201" regulatory complement(1139949..1139954) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1105" gene complement(1142099..1144549) /locus_tag="lmo1106" /db_xref="GeneID:986235" CDS complement(1142099..1144549) /locus_tag="lmo1106" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464631.1" /db_xref="GeneID:986235" /translation="MAYPIKYIENNLVFNNDGECFAYYELIPYNYSFLSPDEKYQVHD NFRQLVAQSRDGKIHALQLATESSIRATQERSKLEVKGRLKEVAHRKIDEQTEALVSM IGDNQVDYRFFIGFKLLLNEQELSIQSVSQEIKKAVQEFLNGVNHKLMGDFVSMSNAE IDRFSKMENLLESKISRRFKIRKLDKNDFGYIIEHIYGQTGTPYEEYEYHLPKKYQDK EVLVKKYDILKPTRCLIDESQRYLKIIHEDETTYVAYFTINSIVGELDFPSSEIFYYQ QQQFTFPIDTSMNVEIVANKKALTTVRNKKKELKDLDSHAWESDNETSNNVIDALDSV NELETTLDQSKESMYKLSYVVRVSAKDLDELKRRCDEVKDFYDDLSIKLVRPFGDMLG LHGEFIPASKRYINDYIQYVTSDFLAGLGFGATQTLGEHEGIYVGYNLDTGKNVYLKP ALASQGVKGSVTNALASAFIGSLGGGKSFSNNMLVYYAVLFGGQAVIVDPKAERGKWK ETLPEIAHEINIVNLTSDDENKGLLDPYVILSRKKDSESLAIDILTFLTGISSRDSDK FPVLRKAIRNVTQSEQRGLLLVIDELRKEDTSISNSIADHIESFVDYDFAHLLFSDGN VTQSISLEKQLNIIQVADLVLPDADTSFEEYTTMELLSVAMLIVISTFALDFIHTDRS IFKIVDLDEAWSFLQVAQGKTLSMKLVRAGRAMNAGVYFVTQNADDLLDEKMKNNIGL KFAFRSTDLVEIKKTLTFFGVDPEDENNQKRLRELENGQCLISDLYGRVGVMQFHPIF EELLQAFDTRPPIRNEVE" misc_feature complement(1142135..1143220) /locus_tag="lmo1106" /note="AAA-like domain; Region: AAA_10; pfam12846" /db_xref="CDD:315512" regulatory complement(1142107..1142112) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1106" gene complement(1144533..1144928) /locus_tag="lmo1107" /db_xref="GeneID:986244" CDS complement(1144533..1144928) /locus_tag="lmo1107" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464632.1" /db_xref="GeneID:986244" /translation="MKKIRSYTSIWNVEKVIYAINDLQLPFPITFTQMTWFIVSLLVI VMFGSLPPLSLIDGALLKYIGIPVGLAWFMSQKTFDGKKPYGFLKSILTYFIRAKTTY AGKAVKLQKQQFNEAITTVRSELYYGISN" misc_feature complement(1144608..1144913) /locus_tag="lmo1107" /note="TcpE family; Region: TcpE; pfam12648" /db_xref="CDD:432696" regulatory complement(1144560..1144565) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1107" regulatory complement(1144936..1144941) /regulatory_class="ribosome_binding_site" gene complement(1145211..1145711) /locus_tag="lmo1108" /db_xref="GeneID:986222" CDS complement(1145211..1145711) /locus_tag="lmo1108" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464633.1" /db_xref="GeneID:986222" /translation="MEEMRIYVANLGKYNEGELVGAWFTPPIDYEEMEEKIGLNGEYE EYAIHDYELPFDIDEYTPISEINRLCEMIMELDGSPIYDELKDIQGMWFSSLEELLES KDDIICYSDCDSMEDIAYYYVEDGLMGEIPERLQMYLNYQAIGRDLEINGNFLVTSHG VFEYCN" misc_feature complement(1145223..1145696) /locus_tag="lmo1108" /note="Antirestriction protein (ArdA); Region: ArdA; pfam07275" /db_xref="CDD:462130" regulatory complement(1145719..1145724) /regulatory_class="ribosome_binding_site" gene complement(1145723..1145944) /locus_tag="lmo1109" /db_xref="GeneID:986220" CDS complement(1145723..1145944) /locus_tag="lmo1109" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464634.1" /db_xref="GeneID:986220" /translation="MNFGQNLYNWFLSNAQSLVLLAIVVIGLYLGFKREFSKLIGFLI IALIAVGLVFNAGGVKDVLLNLFNRIIGA" gene complement(1145941..1146231) /locus_tag="lmo1110" /db_xref="GeneID:986532" CDS complement(1145941..1146231) /locus_tag="lmo1110" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464635.1" /db_xref="GeneID:986532" /translation="MSGLTAELYELGFNCGIELEIYIQDTGIYTSLIIEGFRKGVDEP YQYDFYKQTFYPHYPNKVTVYGEHLRPSQLIERVERYFINRKKYMSERRNNT" regulatory complement(1145953..1145958) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1110" gene complement(1146228..1147412) /locus_tag="lmo1111" /db_xref="GeneID:986218" CDS complement(1146228..1147412) /locus_tag="lmo1111" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464636.1" /db_xref="GeneID:986218" /translation="MNNKTSWIEELKEKRMAYGLSQNKLAVASGITRQYLSDIENEKV IPTEQVKTALLDSLERFNPDNPLEMLFDYVRIRFPTDNVEKIIEEILHLNIDYMIHED FGYYSYPEHYRFGDIMVMVSYDITKGVLLELKGKGCRQYENFLLAQHRSWYDFFTDCL EVNGVFKRLDLAINDKVGILDIPELARKSEQEECISIFRTFKNYRSGELVHRDEKSDM GNTLYIGSLKSEVYFCIYEKDYEQFIKNDIPLEDPEVKNRFEIRLKNDRATHAIQDLL AYRNAEKTAFEIINRYIRFADKDTTKRRSQWQTSERWEWFIGKNRGELRLTTKPEPYS YERTLNWLRHQVAPTLKVASILDVLNETDIIPAMIRDANLTEKHEKLIEQQNLAVEDV IV" misc_feature complement(1146234..1147382) /locus_tag="lmo1111" /note="MobT family relaxase; Region: MobT; NF041493" /db_xref="CDD:469381" regulatory complement(1146237..1146244) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1111" regulatory complement(1147420..1147425) /regulatory_class="ribosome_binding_site" gene complement(1147603..1149003) /locus_tag="lmo1112" /db_xref="GeneID:986216" CDS complement(1147603..1149003) /locus_tag="lmo1112" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464637.1" /db_xref="GeneID:986216" /translation="MRKLFQYRGKKIKQSDKHLLSNFFTVSMVTLFSLVMIPFHLKAI MAVDWETVTLDDFIKQLQTPYFLGSVITALFVCLIVGFLYYYYKIDNIKQLEHRQKLA KMVLQNGWYEAEQIQSEGFFKDLPSSKTKERISHFPKMYYYLKDGLIHINVEITMGKY QDQLLQLENKLETGLYCELVDKELKDSYIEYTLLYDTIASRIQIDEATAHDGRLKLMD SVYWEYDKLPHMLIAGGTGGGKSYFILTIIEALLHTNANLYILDPKNSDLADLATVMD NVYFRKDDMLQCINQFYEDMIARSEAMKQHPNYKTGENYAYLGLPANFLIFDEYVAFM DMLGRDSAEVISKLKQIVMLGRQAGFFLILACQRPDAKYLGDGIRDQFNFRVALGRLS ELGYGMMFGNDTQKQFFLKPIKGRGYVDTGTSVISEFYTPKVPKGYDFLKQIGKLANK SLADPVADEVKATGSD" misc_feature complement(<1148188..1148406) /locus_tag="lmo1112" /note="Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domains [Replication, recombination and repair]; Region: HerA; COG0433" /db_xref="CDD:440202" misc_feature complement(1147873..>1148355) /locus_tag="lmo1112" /note="type VII secretion protein EssC, C-terminal domain; Region: T7_EssCb_Firm; TIGR03928" /db_xref="CDD:274860" gene complement(1149011..1149385) /locus_tag="lmo1113" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986214" CDS complement(1149011..1149385) /locus_tag="lmo1113" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464638.1" /db_xref="GeneID:986214" /translation="MRLAEGIVIEKEKTFGTLKFSALRREVKIVDDEGNVTEQVKERT FDLKCKEQGRMIQVSIPASAGVKNFDYNAEVEIINPIADTVATATFQGADVDWYIKAE DIVLKRPAQNQQADQKQNHDKK" misc_feature complement(1149071..1149355) /locus_tag="lmo1113" /note="Bacterial protein of unknown function (DUF961); Region: DUF961; pfam06125" /db_xref="CDD:461834" regulatory complement(1149391..1149397) /regulatory_class="ribosome_binding_site" gene complement(1149406..1149720) /locus_tag="lmo1114" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986213" CDS complement(1149406..1149720) /locus_tag="lmo1114" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464639.1" /db_xref="GeneID:986213" /translation="MELKHVIPNMEKTFGQLEFAGEGKVEQRRINGKPTILSRSYNLY SNIQRADDIVVILPAEAGEKHFEIEQKVKLVNPRITAEGYKIGTRGFTNYVMYADDIV KV" misc_feature complement(1149415..1149696) /locus_tag="lmo1114" /note="Bacterial protein of unknown function (DUF961); Region: DUF961; pfam06125" /db_xref="CDD:461834" regulatory complement(1149729..1149734) /regulatory_class="ribosome_binding_site" gene complement(1149887..1152475) /locus_tag="lmo1115" /db_xref="GeneID:986211" CDS complement(1149887..1152475) /locus_tag="lmo1115" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="fibrinogen-binding protein" /protein_id="NP_464640.1" /db_xref="GeneID:986211" /translation="MTTYIMVLVTICGTFFTSSTSVHASDLVLNEPTAYSYTGVSPHL GYAITHNPIYVMKMDGKKVFCVESGIFTTTGGGYIPESYISPKKDILSKIAYYGYTNT GQSHYDYVVTQVMIWEELGDQYVSSTIPNYQQRKAEIMAMVNRHDTLPSWHNQEVKVT VGESITLADSHGVLSGMSLESNNTNATLQQDGNNITITPNANSNDGSITYRKVPQNEV GTSIVYTKPQHQTLVEFHLESAKQATVKVDVIKLGNVQITKVDEETGRPLPDTTMKFE YNGTSTELVTDSNGIALIKDIPEGTKITITEVKAPNGYVNKGVSQVVTIEPNKTIELT FDNKEQLGIATLTKAGEEAKEIEVTESEYGDVHTFKYNANVVAGVTYRIEATQDIHSV DGTLKAKKGDTVATVTTDEKGQWHSPNLYLGEYQAVEVSAPAGYILDTRPIPFSLTYA GQEVELASTAIKATNEFQTLDLRLFKDEESILSWNNNQPEIEVIQGQEKVFGVFTREA QALTDEVHVPANALLGYQTVSDGVASFELKLPQGKYYLKELEAGTSHVLNDTEYDFKF TAENNNATYPIYIYQDTVAVGNETMLKIARTPIINKLHFNEFIIKKLNEQAIFDKESG VEFNYDGLGTGAIFTLENEDNEVIQEVTIDKDGQGNFKNIPVGTFYLKEKSASSTHYL MSEKVIRIESTKDGIKAFDEDDKLLGETSSTDEEPTILLEIENDLKKGTAELTKKDVS TGELLPNTGIRILDEEKNTIAEGRTDDKGIYTFEKLPAGKYYFQEYDAPTGYQLDDTP MLFEITENGEVVKCEMTNNKIPEKITSLPQTGDTTNITIFALGMLLSVSTLGVLYFRR KKAKIE" misc_feature complement(1150466..>1152004) /locus_tag="lmo1115" /note="Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis]; Region: ClfA; COG4932" /db_xref="CDD:443959" misc_feature complement(<1150004..>1150897) /locus_tag="lmo1115" /note="Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis]; Region: ClfA; COG4932" /db_xref="CDD:443959" misc_feature complement(1149902..1150003) /locus_tag="lmo1115" /note="LPXTG-motif cell wall anchor domain; Region: LPXTG_anchor; TIGR01167" /db_xref="CDD:273478" gene 1152549..1152917 /locus_tag="lmos39" /db_xref="GeneID:18245190" misc_RNA 1152549..1152917 /locus_tag="lmos39" /product="rli38" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245190" regulatory 1152997..1153002 /regulatory_class="ribosome_binding_site" gene 1153010..1153783 /locus_tag="lmo1116" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986570" CDS 1153010..1153783 /locus_tag="lmo1116" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="regulatory protein" /protein_id="NP_464641.1" /db_xref="GeneID:986570" /translation="MKTKMPEMLSFISEEAVSRKMTSEEIAAHFGYDKHHFSRKFKEI NGFSVVEFLSSLKVEKAIIELDEEVRILDLQEHSGFESSGSFTNTFKKYTGSSPRKYK TEMNDIFYDMKRFENDNKDKSIAHFQENNDSFCNVTIDVPDEFEKGIIFIGLFRTLIP NHMPISGLATKNLIGNQLKNIPSGDYYLLACAISQSNNILSYFNLSNSLRGKEDEKLS FPKCSGNHYAIKLRKPIPEDPPILANVGKILISCLKNTI" misc_feature <1153028..1153315 /locus_tag="lmo1116" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" regulatory 1153834..1153839 /regulatory_class="ribosome_binding_site" gene 1153848..1154204 /locus_tag="lmo1117" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986210" CDS 1153848..1154204 /locus_tag="lmo1117" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1117" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464642.1" /db_xref="GeneID:986210" /translation="MALNAKSITIGLPVSDLEKSASWYEKLFMSDEKLTPVEGVIEYQ IGSVWIQLFEEKINVSENVLRLGVEDLDVEFERLKTLGVITDEVIEDVPGIIRYFVFS DPDGNKLSFYWLYEEE" misc_feature 1153869..1154183 /locus_tag="lmo1117" /note="Lactoylglutathione lyase-related enzyme, vicinal oxygen chelate (VOC) family [General function prediction only]; Region: VOC; COG3324" /db_xref="CDD:442553" regulatory 1154243..1154274 /regulatory_class="terminator" gene 1154309..1154671 /locus_tag="lmos40" /db_xref="GeneID:18245191" misc_RNA 1154309..1154671 /locus_tag="lmos40" /product="rliC" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245191" gene complement(1154864..1156381) /locus_tag="lmo1118" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986207" CDS complement(1154864..1156381) /locus_tag="lmo1118" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1118" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464643.1" /db_xref="GeneID:986207" /translation="MGVKYVEIEKIDNYIENPRHEVGLNELDTLKKLFDVSGYQNMIN LAQDIYTNGLVNASLVTIVKLNNADRYTVYEGNRRVACIKLILHPEKFSFLPKNQIDR IKKMKSDTPSKINLSQIECLITDEEDAFFIMRRIHSGEDKGRGLKSWNTKEQEIFKLR TNPKNSTSIAKIISDKYEEFFKEDIQEEMAYTNIQRLFNNLEVRESLGIEKDNIDSFS CERLYLIKGVIEKVNQIAKIENLSISRKFNKRKIIEQIVIPIIEELKSKQLESKAINS IHIEQKNKSNKLSNSKEQQTQNKEATSNNGISVREDTGLKTEYKSIESISSTLKPKLP PKIGSGKLLSSTMPFTNLYHSNVRINTLVIEINQIRYKDFRLATQFLLRSLMEVYGHE YIDYFANLDYQDVQKMKAIAKDRIKRNQTVNEIYSEFISNHITKHFPKYAEQAELINI SLSKNNNSSLMKILNFMVHSQNHIPDSIELIEAWYKVKSIVEAIDNILHEVKHNY" gene complement(1156384..1157241) /locus_tag="lmo1119" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985160" CDS complement(1156384..1157241) /locus_tag="lmo1119" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="methylase" /protein_id="NP_464644.1" /db_xref="GeneID:985160" /translation="MNPSPLRYPGGKHKMYKYIKKLVAVNDIDTYIEPFCGGSGLALE LLLSKDVNRIIINDYDYSIYCFWKSVLDYTDELIDMINSSEVTIEEWFRQKEIRKDIY DHSVVEVGFSTLFLNRTNRSGIIDKAGPIGGYQQTGNYLIDCRFNKEKLIEKILKIAQ VKDKIEIYNLEALDFIDDVIKVEKNGFTFFDPPYYQKGQGLYTNFYSTGDHQTLSQKI INELKNKKWIVTYDLAPEISRMYNKIDSICFTLSYTLQEKKRGAEFLFFSKKTRRIKD SEYLHFLEV" misc_feature complement(1156441..1157241) /locus_tag="lmo1119" /note="DNA-adenine methylase [Replication, recombination and repair]; Region: Dam; COG0338" /db_xref="CDD:440107" regulatory complement(1156389..1156394) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1119" regulatory complement(1157249..1157254) /regulatory_class="ribosome_binding_site" regulatory 1157578..1157583 /regulatory_class="ribosome_binding_site" gene 1157592..1158008 /locus_tag="lmo1120" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986206" CDS 1157592..1158008 /locus_tag="lmo1120" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1120" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464645.1" /db_xref="GeneID:986206" /translation="MTIWTLINISLSGIKLKTSPWETTTVLGTYVSDTQNVLTELGNI KSLDFGMKKNRFNLLNAPDELYINPKQFWEEFNQPFLDKAIQRGDDVAMATKPTVENL YIAGTKQLTGFGREYKYLLQHGYAYDVKTSTMKLKK" regulatory 1158005..1158010 /regulatory_class="ribosome_binding_site" gene 1158020..1158388 /locus_tag="lmo1121" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986205" CDS 1158020..1158388 /locus_tag="lmo1121" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1121" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464646.1" /db_xref="GeneID:986205" /translation="MKLDDNAKEIILKKSEFLLHNNFKLIEITDATITFSNKKIAFVI GYERYDNVSNINIKFLEENEMFNLGWIAFVRRNQTPLPQNKLDNILELLDYAEKNYAK VINLQFCQESRGMIEDFLKE" gene 1158425..1158844 /locus_tag="lmo1122" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986203" CDS 1158425..1158844 /locus_tag="lmo1122" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1122" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464647.1" /db_xref="GeneID:986203" /translation="MDFHKEVEKTFKGYEQKYQLMLTKIDNNEVAFIGENYALGIGWS TDGIDWHYFKLDNSMLCKFSLDNLLNAKLTHIERDGLFPSKTICEKIINELIICERVF NNHFQELLRGETLSDYGNKEFVSNLEKSIIERELLTR" regulatory 1158917..1158922 /regulatory_class="ribosome_binding_site" gene 1158930..1159403 /locus_tag="lmo1123" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986204" CDS 1158930..1159403 /locus_tag="lmo1123" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1123" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464648.1" /db_xref="GeneID:986204" /translation="MEFKHEVENNFANIIQEYRFNLIKVNEDEIMLLNPNYALTIWKS REGIDIYYLFLHSLEKVKITNFLFSNYEKDLLANITPANNLTDQISNSLLIHARGLSK YFPELLSGQNDWVKEFKENKFYNEPRAINKDEYSAYQTIIKNINGKKIEGFQNEI" regulatory 1159379..1159384 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1123" gene 1159393..1159830 /locus_tag="lmo1124" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986198" CDS 1159393..1159830 /locus_tag="lmo1124" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1124" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464649.1" /db_xref="GeneID:986198" /translation="MRYEADFINRFQPLIEEYKLNYKVISEEELALFGSNFALVFSIH FDEVSLNYVCRDKDNLLVSYDVWSYFLHVFDDKDRENLPKYNSVRERVDVSFLILARG LPRHWNNVLNGDDKWLEAYKQYKLAGVPKKVIGHLKDSLSLNI" regulatory 1160210..1160215 /regulatory_class="ribosome_binding_site" gene 1160220..1160753 /locus_tag="lmo1125" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986200" CDS 1160220..1160753 /locus_tag="lmo1125" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1125" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464650.1" /db_xref="GeneID:986200" /translation="MLIPSYLKSTAKELSINDFLNVEIVTINKEETFEILYCGTLKEI EGDQLITGEAYEIPLKIIAKSTLSGKEILLYDGAYYGYDSMFCDEFEEEATQNRELKK YPINNLSNIRLSIGIGIDYESEKEEYEFDENGHVVLIDDRHIPWEQVKTDGFDFLEIT ATDENGDSLLILTEELA" regulatory 1160764..1160769 /regulatory_class="ribosome_binding_site" gene 1160778..1161230 /locus_tag="lmo1126" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986193" CDS 1160778..1161230 /locus_tag="lmo1126" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464651.1" /db_xref="GeneID:986193" /translation="MILINKRAENQDYQMILAIWEKSVIATHDFLAAEDRQFYKEQIP LFLDNVELFLWFAGEEIVGFSGTSERELDMLFLNPIATGNGYGSQILIWLIENKRINL VDVNEQNENATRFYLKHGFVVSSRSDLDGFGNPYPILHLQLKERVNGI" misc_feature 1160778..1161212 /locus_tag="lmo1126" /note="NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, from bacterial antibiotic resistance to circadian rhythms in mammals. Members...; Region: N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate; cl17182" /db_xref="CDD:473072" regulatory 1161208..1161213 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1126" gene 1161220..1161675 /locus_tag="lmo1127" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986196" CDS 1161220..1161675 /locus_tag="lmo1127" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1127" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464652.1" /db_xref="GeneID:986196" /translation="MEYEQLLQNELGELEIIQEELQNKEYRGMIVKTAKDGTTIRTRL AKKTDKKAGYFVAFWEKDEFGKNCPFDENDCADFLCIVVIDGDLNGLFVFPRQCLIDK GILTSEASIGKMAARFYPTWCQDLNKTAKKTQAWQQVYFKNYSIRKEDH" misc_feature 1161220..1161666 /locus_tag="lmo1127" /note="Uncharacterized conserved protein [Function unknown]; Region: COG4815" /db_xref="CDD:443843" regulatory 1161660..1161692 /regulatory_class="terminator" gene complement(1161689..1162711) /locus_tag="lmo1128" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985150" CDS complement(1161689..1162711) /locus_tag="lmo1128" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1128" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464653.1" /db_xref="GeneID:985150" /translation="MAKNGVDTIKRWKKITIIMSAIIVILVAILFIGNNYEMNETRVA IPTTGGKLSAVVTTPKHGKPKGIIVFVHGDGAQEATQNGGYKPLMERFAKQGYISVSW DKLGVGKSSGNWLNQSMDDRANEVNQVIEWMKVKYPDSTAKIGLWGASQAGWVVPKAM NANNEIDFSILAAPAINWMRQGEYNTCWQAKDTGKTTKEVKQAQQNFLTDSALISKNK TYESYKQNGGKEEMTPGRYNFIRKNMNQDATLDLSKVKTKIYLALAEKDKNVDSAETK DVYTQQIKKENLETQTIPNVSHQMINPAIANSELLTNIVGLMVPKYFLVDNAYLDYCE QVVSKQ" misc_feature complement(1161818..1162579) /locus_tag="lmo1128" /note="Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]; Region: DAP2; COG1506" /db_xref="CDD:441115" gene complement(1162666..1163280) /locus_tag="lmo1129" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986195" CDS complement(1162666..1163280) /locus_tag="lmo1129" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464654.1" /db_xref="GeneID:986195" /translation="MTLSIKSIDSFEKDSIVEEVASLVFAGFKSKFTKTLFKETEAHD ITYAFCHYIYTEKGENLLIAIQDELVCGCLFVTSKSDSYQKLYQTLRKFLSFSQCLKL IFLLSLLSHKPVQNERYIDFITVSPNFRGQGIGKTLISHCLETFHDEKITLYVAKKNS GAYKLYRNLGFQVIQKENSTLMGVLTGIKEWRKMEWIQLNVGKK" misc_feature complement(<1162759..1162926) /locus_tag="lmo1129" /note="Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]; Region: RimI; COG0456" /db_xref="CDD:440224" gene complement(1163277..1163996) /locus_tag="lmo1130" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985135" CDS complement(1163277..1163996) /locus_tag="lmo1130" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464655.1" /db_xref="GeneID:985135" /translation="MLTLSTGEIAQLFQISKYKIRHYIDEGILVPKRNPENGYYYFEE ADIYRLYQIILFRKIGFSIQEIKESLLGEKVTPMLEQAEQDLQQKIEELVEIQKTIQK IIHSQKEMRLNEITFVAKDDRYFKKVPNQIIDHNTINYSQAAKHNLPDLEEPFYIFSK QDTGVICLKSIKKRSDYTFPAGEYACKSFIAKDEATIETQIQLFLEELKYPTTSMILY ENIYPSLAYPDAMVYTMEVPL" misc_feature complement(1163706..1163987) /locus_tag="lmo1130" /note="Helix-Turn-Helix DNA binding domain of BmrR-like transcription regulators; Region: HTH_BmrR-like; cd04768" /db_xref="CDD:133396" misc_feature complement(order(1163877..1163885,1163934..1163936, 1163976..1163984)) /locus_tag="lmo1130" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133396" misc_feature complement(1163874..1163876) /locus_tag="lmo1130" /note="drug binding residues [chemical binding]; other site" /db_xref="CDD:133396" misc_feature complement(order(1163706..1163711,1163718..1163720, 1163730..1163732,1163748..1163750,1163760..1163762, 1163790..1163792,1163817..1163822,1163832..1163834, 1163841..1163843)) /locus_tag="lmo1130" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133396" regulatory complement(1163288..1163293) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1130" regulatory complement(1164004..1164009) /regulatory_class="ribosome_binding_site" regulatory 1164233..1164237 /regulatory_class="ribosome_binding_site" gene 1164245..1165960 /locus_tag="lmo1131" /db_xref="GeneID:986529" CDS 1164245..1165960 /locus_tag="lmo1131" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_464656.1" /db_xref="GeneID:986529" /translation="MIDKRLFQLVEKKSLVLLILFRVLSLGLMIGLWLVFAQQLTHYL EGQNVDWLWLIGTVLVVLVGKAILTKLAEKQIYQASAELRLSMRRAVMEKAFRLGNNE GQLPASTLTQLAVDGIEQLEIYYSRFLPQLFYCLIASLMIFGSLVGFAWQPAIVLLIC MPMIPIVIMAVMKIAKRILSGYWSDYTNLGTKFHENLSGLSILKAYDQDKYKQEEIVS DAERFRKATMSLLSMQLNSITIMDIISYSGAALGIGMSLIMFTNGTISMTGMLMFLLL SAEFFIPMRQLGSLFHVAMNGISACSKLFAYLELKEQVYGSVELAKPLEKIEVHHLTY TYEGGKAKALQDVSVHFNKGSFSALVGKSGSGKSTFVRVLLNQLPGYQGEIVWNDVPL ASLSGEAIRKQAVLVDNHGYLYANSIRENLLIGNPAANDSDLWNVLEQVSLADFVRKL PEQLNENLEEDGSNLSGGQRQRLLLARALLRQAEVYVFDEITSGVDLESEKIILLVLQ ELAKEKIVLFISHRLYNVLGADQVLVFDAGKLLEVASPERLQQESNYFKNYFLEEEAL LKGGA" misc_feature 1164248..1165900 /locus_tag="lmo1131" /note="ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]; Region: CydD; COG4988" /db_xref="CDD:444012" regulatory 1165948..1165953 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1131" gene 1165962..1167608 /locus_tag="lmo1132" /db_xref="GeneID:986192" CDS 1165962..1167608 /locus_tag="lmo1132" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_464657.1" /db_xref="GeneID:986192" /translation="MSEWTIIGWLLKFVKPLRGKMILAILLGIISNLSVIMISLIGTY GIIAVILQQPLNPYKWLFVMVACGVVRGLARYLEQYLNHDIAFRLLAIIRERIFATLR KLGPARLSGKKSGDLVAAITTDVEALEVFFAHTISPVFIALGTTIATVGFLASYDVGL AIILLVGQIMVGVVLPMISYKRNKKIGTAYQQAFVGLNQMVMENIASLQDIFQFKLGE ERLRKLETQGEKLNRQYKKRIRQGSELQILGEWVLIGTATIILVLGSLSQLPLETVLI GTVLSLSSFGSVLALNALGTALLTTFASGKRLYALTEEKPVVLFNGQLELSDFESAEL DKVSFSHDGKQPLLNELSLALPKGKWLGIGGESGSGKSTLVKLLMRYWDPDGQVKLNN NELPKITESSLHRLEGVMEQRTFLFEDTLGNNIRLGKKDATLEEVKEAARKAAIDTWI ETLPEGYETIIGGQSRNLSDGERQRIGLARLFLHDAPLLLLDEPTSNLDYINEQAILN TLRSEIQDKTVLVISHRATTLDLAEEQLFIENGALKRAAK" misc_feature 1165986..1167605 /locus_tag="lmo1132" /note="ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]; Region: CydC; COG4987" /db_xref="CDD:444011" regulatory complement(1167604..1167637) /regulatory_class="terminator" regulatory 1167615..1167637 /regulatory_class="terminator" gene complement(1167645..1167953) /locus_tag="lmo1133" /db_xref="GeneID:986234" CDS complement(1167645..1167953) /locus_tag="lmo1133" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464658.1" /db_xref="GeneID:986234" /translation="MYLKENTNYLYCTAVIQTTGKVSYEQLVEHLEALRAKTVKEPGC VLFEIVPLESALGRFALWEIWQNQESFYYHHEQNYTKEFFAAELDTVEFFESSEKVNL " misc_feature complement(1167696..1167881) /locus_tag="lmo1133" /note="Quinol monooxygenase YgiN [Energy production and conversion]; Region: YgiN; COG1359" /db_xref="CDD:440970" regulatory complement(1167961..1167966) /regulatory_class="ribosome_binding_site" regulatory 1168009..1168014 /regulatory_class="ribosome_binding_site" gene 1168021..1168368 /locus_tag="lmo1134" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986190" CDS 1168021..1168368 /locus_tag="lmo1134" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="regulatory protein" /protein_id="NP_464659.1" /db_xref="GeneID:986190" /translation="MYIKDFATKTGLSIDTLRYYEEEKLLIPARNEKNYRVYTEEDYC WVQLLLKMKQTEMTITNIKNFATLQKQGDKTLPNRIQILDNHMENLYEQQKDLAETIS FVAKKVDGYREKL" misc_feature 1168021..1168356 /locus_tag="lmo1134" /note="Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB; Region: HTH_YyaN; cd01109" /db_xref="CDD:133384" misc_feature order(1168024..1168032,1168072..1168074,1168120..1168128) /locus_tag="lmo1134" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133384" misc_feature order(1168162..1168164,1168171..1168173,1168183..1168188, 1168213..1168215,1168267..1168269,1168279..1168281, 1168297..1168299,1168309..1168311,1168318..1168323) /locus_tag="lmo1134" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:133384" regulatory 1168376..1168381 /regulatory_class="ribosome_binding_site" gene 1168390..1169541 /locus_tag="lmo1135" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986189" CDS 1168390..1169541 /locus_tag="lmo1135" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1135" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464660.1" /db_xref="GeneID:986189" /translation="MMINNEIREVIGLHPIFENDQKLTVENAEVIIRNHVLIKLILDQ ADCYKEIDYNIELTDTNELVGRKNAKPKALTLKAILKAKTKELRLKINKVSHRIELKL GVQHFENIYFEKGMVFTRENVQTKITENYGSDWLGTLDKAKLKVKTRQTIQQGSIFSY PIGNEYGFGLVIGCFQMFRKQKIMPQDSSHYLNLMMGVPLVIRSFNYTSKQNTVDLPL LKKRQLLNPEFIMDDLVLRGDFPIIGRVVLEEADILFPMNFSFNGVSTTYAGYQAIDE PDRDIIKKYEEEITIRFDWGFGSKTMTAKEFLKRRSGKESFLSYSGLGMTPIAGYSKK LISPKTIFTPEELKQIYEVLDIDGEISFDDFNEKHNGILAQNMLSIDGK" misc_feature 1168846..1169193 /locus_tag="lmo1135" /note="Immunity protein 26; Region: Imm26; pfam15428" /db_xref="CDD:434709" regulatory 1169991..1169996 /regulatory_class="ribosome_binding_site" gene 1170002..1171621 /locus_tag="lmo1136" /db_xref="GeneID:986166" CDS 1170002..1171621 /locus_tag="lmo1136" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_464661.1" /db_xref="GeneID:986166" /translation="MKKTIKITTSLLLSFACVFSIGDFTKPHTVEAEIVYSLTNPKPV NEIFTDPKLAQVVADWLKLPAATSSVTQTQLNTIKALHFDSKGVQSLEGVEYLKNLTQ VFGYGNQVSDLGPLSNLTKLEVIQMPRNQISDLTPIANLTALMSLDFEFNNLQTIEPI KNLTNMLELNVSANPISDINAVKNMTQLEFLTLRDCEVSDLSPVENLSNMLMFWAGRN NISDITPLKNMSKLLGLSLFGNQIKDVSVIKNLTSLEDFDIKANQVSDISSLATSTTL ETLTLSFNQIIDISPLKNLTNLTRLELENQTRALDAVEIDNPLILPAPVIDENGSRVQ PSKVSHAGVYANGEITWEGLQSNYILNYEYALPVTIGSLTTTYSGKITQPLLEKPVDP VTPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVNPVDPVDPVDPVDPV DPVNPVDPVNPVNPDPVNPMKPVEPIIPVTLENQFTLVNQTISVNEEIATQPAKDIVK LPKTGESGMTSSLFGGLILTVTSAILLRKRK" misc_feature 1170002..1170175 /locus_tag="lmo1136" /note="Bacterial adhesion/invasion protein N terminal; Region: Internalin_N; pfam12354" /db_xref="CDD:289150" misc_feature <1170275..1171159 /locus_tag="lmo1136" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 1170299..1170364 /locus_tag="lmo1136" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1170365..1170430 /locus_tag="lmo1136" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1170431..1170496 /locus_tag="lmo1136" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1170497..1170562 /locus_tag="lmo1136" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1170563..1170628 /locus_tag="lmo1136" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1170629..1170694 /locus_tag="lmo1136" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1170695..1170760 /locus_tag="lmo1136" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1170761..1170892 /locus_tag="lmo1136" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1171523..1171618 /locus_tag="lmo1136" /note="LPXTG-motif cell wall anchor domain; Region: LPXTG_anchor; TIGR01167" /db_xref="CDD:273478" regulatory complement(1171618..1171653) /regulatory_class="terminator" regulatory 1171629..1171664 /regulatory_class="terminator" gene complement(1171662..1172009) /locus_tag="lmo1137" /db_xref="GeneID:986423" CDS complement(1171662..1172009) /locus_tag="lmo1137" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1137" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464662.1" /db_xref="GeneID:986423" /translation="MELTKENFQKLDLIHLSLENRHSMSEIIDILSESYIEITQSGVV KDYAYYKSLTTLGDSNLAIMEYDVKILDETKVLSYYKLKNLSENNYTMRSNIWIFENG SWKLTFHQGTRII" misc_feature complement(1171668..1171997) /locus_tag="lmo1137" /note="Uncharacterized protein CV0675, UCP033623 family [Function unknown]; Region: COG4994" /db_xref="CDD:444018" regulatory complement(1172017..1172022) /regulatory_class="ribosome_binding_site" regulatory complement(1172031..1172067) /regulatory_class="terminator" gene complement(1172076..1172648) /locus_tag="lmo1138" /db_xref="GeneID:987656" CDS complement(1172076..1172648) /locus_tag="lmo1138" /experiment="EXISTENCE:[PMID:19448609]" /note="hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease proteolytic subunit" /protein_id="NP_464663.1" /db_xref="GeneID:987656" /translation="MAENTKNENITNILTQKLIDTRTVLIYGEINQELAEDVSKQLLL LESISNDPITIFINSQGGHVEAGDTIHDMIKFIKPTVKVVGTGWVASAGITIYLAAEK ENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKEIIRMRERINRLIAEATGQSYEQISK DTDRNFWLSVNEAKDYGIVNEIIENRDGLK" misc_feature complement(1172079..1172609) /locus_tag="lmo1138" /note="ATP-dependent Clp protease proteolytic subunit; Reviewed; Region: PRK12553" /db_xref="CDD:237133" misc_feature complement(order(1172148..1172150,1172154..1172156, 1172223..1172225,1172229..1172231,1172235..1172237, 1172244..1172246,1172286..1172297,1172313..1172315, 1172319..1172321,1172385..1172387,1172409..1172411, 1172421..1172426,1172433..1172435,1172442..1172444, 1172454..1172456,1172475..1172477,1172517..1172519, 1172526..1172531,1172538..1172543,1172568..1172570, 1172574..1172576)) /locus_tag="lmo1138" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:132928" misc_feature complement(order(1172154..1172156,1172301..1172303, 1172376..1172378)) /locus_tag="lmo1138" /note="active site residues [active]" /db_xref="CDD:132928" regulatory complement(1172658..1172663) /regulatory_class="ribosome_binding_site" gene complement(1172797..1173036) /locus_tag="lmo1139" /db_xref="GeneID:986182" CDS complement(1172797..1173036) /locus_tag="lmo1139" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1139" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464664.1" /db_xref="GeneID:986182" /translation="MQEVTIKLNEELKTINVSLVFASKNPQTNQTNVNLSYSEKDEQK WLQLFYVEEEIETLIPGIREGKITDLSQYVIQEID" regulatory complement(1173042..1173047) /regulatory_class="ribosome_binding_site" regulatory complement(1173094..1173123) /regulatory_class="terminator" gene complement(1173144..1173551) /locus_tag="lmo1140" /db_xref="GeneID:986180" CDS complement(1173144..1173551) /locus_tag="lmo1140" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1140" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464665.1" /db_xref="GeneID:986180" /translation="MFNQAKRISTFFTFNGNGEEAFNFYLDTFPDAKKVGLTYFTKPE QGGDIGKVLNATFEMKGASFMIMDMTNNASPNFSWATTTLYFADTEDEFDTLFEKLAK EGTVMMGPEAVEALRKVAWVTDKYGITWQLAFV" misc_feature complement(1173156..1173530) /locus_tag="lmo1140" /note="Escherichia coli PhnB and similar proteins; Region: PhnB_like; cd06588" /db_xref="CDD:319899" misc_feature complement(order(1173159..1173161,1173189..1173191, 1173276..1173278,1173288..1173290,1173294..1173311, 1173357..1173359,1173366..1173371,1173465..1173467, 1173513..1173530)) /locus_tag="lmo1140" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319899" regulatory complement(1173560..1173565) /regulatory_class="ribosome_binding_site" regulatory 1173630..1173635 /regulatory_class="ribosome_binding_site" gene 1173643..1174122 /locus_tag="lmo1141" /db_xref="GeneID:986179" CDS 1173643..1174122 /locus_tag="lmo1141" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="uroporphyrin-III C-methyltransferase" /protein_id="NP_464666.1" /db_xref="GeneID:986179" /translation="MKYPIMLDITGKKVVIIGGGKVALRKITGLLDAGADILVVGLKI LPEIKALDVRVVEEAYRPEHLHAAFMIFICTDNLEVNQCVLRDREAGQLVNDTTDQAN SDFFNMATVTKNELMVGISTGGGNPGYAKKVKREVSQLVANLETEEIGRRNKKDKTC" misc_feature 1173643..>1174062 /locus_tag="lmo1141" /note="Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme transport and metabolism]; Region: CysG2; COG1648" /db_xref="CDD:441254" regulatory 1174107..1174135 /regulatory_class="terminator" regulatory 1174232..1174237 /regulatory_class="ribosome_binding_site" gene 1174241..1175605 /locus_tag="lmo1142" /db_xref="GeneID:986177" CDS 1174241..1175605 /locus_tag="lmo1142" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PduS protein" /protein_id="NP_464667.1" /db_xref="GeneID:986177" /translation="MSQMSILEKIKDAGVVGCGGAGFPTHAKFSGEVEYLIINAAECE PLLKTDHFVMRNHAVETIKAIEMVKSQVGAEFAVIATKRYYTEEIAALRSAITELDAS VTIHEMDNVYPTGDEQVMVFEVTGRVVPPSGIPLMVGCIVSNVSTMWNVFHAIQDDAP VVRKQLTVTGAVGEPKLLDVPVGTPFEVCLAAAGGTNLDEYLFLDGGPMMGKLNDQST IADKVVTKTTSGLIVAEDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRQQLGH DIHPHKVMRHFAVAEDITDIKPDPIWEEAMICCECGICEVIACPMGLSPRQVNIHVKK ELLKQGVRYQTDKKEFTPDPMREYKSIAPKNILIKMGLQQYADVHLEKMHYLEVDEVF IPTKMHIGAPSIPVVSEGDIVKKGDLIAKIPDTALGANIHASIDGQIIRITEEQVHIK KVMS" misc_feature <1174307..1175272 /locus_tag="lmo1142" /note="Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit [Energy production and conversion]; Region: RnfC; COG4656" /db_xref="CDD:443694" misc_feature 1175405..>1175572 /locus_tag="lmo1142" /note="Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit [Energy production and conversion]; Region: RnfC; COG4656" /db_xref="CDD:443694" regulatory 1175589..1175594 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1142" gene 1175602..1176156 /locus_tag="lmo1143" /db_xref="GeneID:986169" CDS 1175602..1176156 /locus_tag="lmo1143" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PduT protein" /protein_id="NP_464668.1" /db_xref="GeneID:986169" /translation="MKMDTLGFLELNSISKGIEAVDTMLKAANSELIYAKASCPGKYY ILIAGTVDSVAQSIEAGTKIGAANIVGNLVIPRVSDQVIKAINKTEVPDEMNAVGVME YYSCSGSIIAADAAVKAADVQLMDIRLATGIAGKSFVVLTGDTAACETAVEAGLAAAK EEALLINKVVIPRPRKEVFESLIY" misc_feature 1175614..1175841 /locus_tag="lmo1143" /note="1,2-propanediol utilization protein T (PduT), Bacterial Micro-Compartment (BMC) domain repeat 1; Region: BMC_PduT_repeat1; cd07053" /db_xref="CDD:132893" misc_feature order(1175629..1175631,1175638..1175640,1175665..1175667, 1175674..1175679,1175695..1175697,1175710..1175712, 1175725..1175727) /locus_tag="lmo1143" /note="putative hexamer interface [polypeptide binding]; other site" /db_xref="CDD:132893" misc_feature 1175710..1175712 /locus_tag="lmo1143" /note="putative hexagonal pore [active]" /db_xref="CDD:132893" misc_feature 1175890..1176123 /locus_tag="lmo1143" /note="1,2-propanediol utilization protein T (PduT), Bacterial Micro-Compartment (BMC) domain repeat 2; Region: BMC_PduT_repeat2; cd07054" /db_xref="CDD:132894" misc_feature order(1175905..1175907,1175914..1175916,1175941..1175943, 1175950..1175955,1175971..1175973,1175986..1175988, 1176007..1176009) /locus_tag="lmo1143" /note="putative hexamer interface [polypeptide binding]; other site" /db_xref="CDD:132894" misc_feature 1175986..1175988 /locus_tag="lmo1143" /note="putative hexagonal pore [active]" /db_xref="CDD:132894" regulatory 1176291..1176296 /regulatory_class="ribosome_binding_site" gene 1176304..1176654 /locus_tag="lmo1144" /db_xref="GeneID:986310" CDS 1176304..1176654 /locus_tag="lmo1144" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PduU protein" /protein_id="NP_464669.1" /db_xref="GeneID:986310" /translation="MSFDDNKERVIQEYVPGKQVTLAHLIANPNRDIYTKLGLEEGAS AIGILTITPSEASIIASDIATKSGDVRIGFIDRFSGSVVLTGDVSSVESALQQVVFSL HEILDFSIPKITRS" misc_feature 1176304..1176651 /locus_tag="lmo1144" /note="Ethanolamine utilization protein EutS, microcompartment shell protein [Amino acid transport and metabolism]; Region: EutS; COG4810" /db_xref="CDD:443838" regulatory 1176646..1176651 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1144" gene 1176660..1177091 /locus_tag="lmo1145" /db_xref="GeneID:986160" CDS 1176660..1177091 /locus_tag="lmo1145" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PduV protein" /protein_id="NP_464670.1" /db_xref="GeneID:986160" /translation="MKKMMVMGSVGCGKTTLCQKLHGYDILYKKTQAVEYFQEMIDTP GEFVQHRQLYSALTVTAADASVIAILQSVTEKKQTFSPMFASIFAKPVIGIVTKVDLA ESDKDIERAERELRMAGAKHIFYISSVEETGIEELRAYLED" misc_feature 1176663..1177088 /locus_tag="lmo1145" /note="ethanolamine utilization protein, EutP; Region: EutP; TIGR02528" /db_xref="CDD:131580" misc_feature 1176681..1176704 /locus_tag="lmo1145" /note="G1 box; other site" /db_xref="CDD:206648" misc_feature order(1176687..1176707,1176792..1176794,1176948..1176953, 1176957..1176959,1177038..1177046) /locus_tag="lmo1145" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206648" misc_feature 1176750..1176752 /locus_tag="lmo1145" /note="G2 box; other site" /db_xref="CDD:206648" misc_feature 1176762..1176770 /locus_tag="lmo1145" /note="Switch I region; other site" /db_xref="CDD:206648" misc_feature 1176783..1176794 /locus_tag="lmo1145" /note="G3 box; other site" /db_xref="CDD:206648" misc_feature order(1176789..1176794,1176852..1176857) /locus_tag="lmo1145" /note="Switch II region; other site" /db_xref="CDD:206648" misc_feature 1176948..1176959 /locus_tag="lmo1145" /note="G4 box; other site" /db_xref="CDD:206648" misc_feature 1177038..1177046 /locus_tag="lmo1145" /note="G5 box; other site" /db_xref="CDD:206648" regulatory 1177103..1177108 /regulatory_class="ribosome_binding_site" gene 1177116..1177865 /locus_tag="lmo1146" /db_xref="GeneID:986162" CDS 1177116..1177865 /locus_tag="lmo1146" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1146" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464671.1" /db_xref="GeneID:986162" /translation="MPQVRDLSVIDVPGGCVLTSCDISAGFGEKTHDGLMVAPEVTAR LTLRVALIEMIASGAEVVAVSDVVGGEMEPTGRRVIVGLKDELTKANLSHIELNGSTE ENMKVTQTSVGVLVTGFATKAALKLINVHEAAVLFAFGEPIVGAEVLQKLRDMPDYRL VKKLVEHNDVLEVVPVGSKGMAYEAHLLARLNGGIFVPSDTFSEAVMNKTAGPASVIL AAVKEDNVTAFEREFLGAKRIGLLRGNEEWT" regulatory 1177849..1177854 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1146" gene 1177862..1178419 /locus_tag="lmo1147" /db_xref="GeneID:986161" CDS 1177862..1178419 /locus_tag="lmo1147" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis protein CopB" /protein_id="NP_464672.1" /db_xref="GeneID:986161" /translation="MSEMMLVTGGARSGKSSFAEREAAKYDRVLYVATGIAFEKDTEF QARIKKHQATRPANWDTFEAFQGIASYLDQHSTQYDVMMLDCVTMLVTNLFFTLLGER ELTNEIADEVEAGIQAEVSAILEAGKASQAKLIFVTNEIGLGVVPENKLTRVFRDIIG RVNQQIATQVEEVYLVVSGIPKRWK" misc_feature 1177871..1178416 /locus_tag="lmo1147" /note="Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase [Coenzyme transport and metabolism]; Region: CobU; COG2087" /db_xref="CDD:441690" regulatory 1178408..1178413 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1147" gene 1178421..1179167 /locus_tag="lmo1148" /db_xref="GeneID:986158" CDS 1178421..1179167 /locus_tag="lmo1148" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cobalamin (5'-phosphatase) synthetase" /protein_id="NP_464673.1" /db_xref="GeneID:986158" /translation="MKTLILLIQFFTRIPLPIQINMDEINLKKGSALLPFVGVIIGAW NWLIFTLVALVMPLPVAIIAGLFAEVIITGGFHVDALADTADGLFSSRKRERMLEIMK DSRVGANGVIAICFYFLFYGALFLSVTDTQQICWLFFVLPIVAKGVTMLLFAKMTYAG SKEGLGSIFLGVPWWPIVIAQVIVLAVLGLFFSYVGVIAYVGVILFTIIYRAFVYKRI GGMNGDTLGAGGQMGQLICLFCLVLLWGLV" misc_feature 1178421..1179158 /locus_tag="lmo1148" /note="Cobalamin synthase CobS (adenosylcobinamide-GDP ribazoletransferase) [Coenzyme transport and metabolism]; Region: CobS; COG0368" /db_xref="CDD:440137" regulatory 1179154..1179158 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1148" gene 1179168..1179743 /locus_tag="lmo1149" /db_xref="GeneID:986156" CDS 1179168..1179743 /locus_tag="lmo1149" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alpha-ribazole-5'-phosphatase" /protein_id="NP_464674.1" /db_xref="GeneID:986156" /translation="MQLIFARHGETDWNVAKKYCGQLDVPLNEHGVQQMKHLREKLED YSFDLVVTSDLMRVKQSANILSNAKTVRFPALNEMNFGDFEGYTYQEISTKFPKAWNE YCNNWQTALFPNGESFPIFYERVVEVLEVEMEKWQQIDTVLLVGHLGVLRVIALFLQK QTIAQYWDIDFKQGCYSLWDNKSQRFLISNQ" misc_feature 1179174..1179704 /locus_tag="lmo1149" /note="alpha-ribazole phosphatase; Region: ribazole_cobC; TIGR03162" /db_xref="CDD:274461" misc_feature order(1179186..1179191,1179336..1179338,1179606..1179611) /locus_tag="lmo1149" /note="catalytic core [active]" /db_xref="CDD:132718" gene 1179807..1179993 /locus_tag="lmos41" /db_xref="GeneID:18245192" misc_RNA 1179807..1179993 /locus_tag="lmos41" /product="rli39" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245192" regulatory complement(1180104..1180142) /regulatory_class="terminator" gene complement(1180152..1181036) /locus_tag="lmo1150" /db_xref="GeneID:986159" CDS complement(1180152..1181036) /locus_tag="lmo1150" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator PocR" /protein_id="NP_464675.1" /db_xref="GeneID:986159" /translation="MLLQSKSNEMLIEKVMDEFSAATSLASVVVDIHGTEVSRLCNFT PFCQLIRSNPKYRSLCQKCDMFGGLEASKTGKPLIYRCHAGLTDFSVPIVVENQLSGF LLSGQVICEESSEVGNIQTEETDWKNDKDLISAFRSVPVFSSKKINSSAEMLTIISQY YLKSEMEKSREEQKQKIVFHHTKVAHHEENKEIRKALKYIEKNLNRPITLDEVASHVY LSSYYFSKLFKKEMNVNFINYVNQKKMSLAKEMLKNPRLSIDNIARNLGFTQTSYFCK VFRKEFDVTPKGYRETFK" misc_feature complement(<1180161..1181003) /locus_tag="lmo1150" /note="Ligand-binding sensor domain [Signal transduction mechanisms]; Region: PocR; COG4936" /db_xref="CDD:443963" gene 1180826..1181254 /locus_tag="lmos42" /db_xref="GeneID:18245193" misc_RNA 1180826..1181254 /locus_tag="lmos42" /product="rliH" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245193" regulatory complement(1181044..1181049) /regulatory_class="ribosome_binding_site" regulatory 1181325..1181330 /regulatory_class="ribosome_binding_site" gene 1181338..1181625 /locus_tag="lmo1151" /db_xref="GeneID:986164" CDS 1181338..1181625 /locus_tag="lmo1151" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PduA protein" /protein_id="NP_464676.1" /db_xref="GeneID:986164" /translation="MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTV MVRGDVGAVKAATEAGAAAAKNVGTVMSTHVIPRPHTDVEEILPVRVKSDE" misc_feature 1181338..1181595 /locus_tag="lmo1151" /note="Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN [Secondary metabolites biosynthesis, transport and catabolism, Energy production and conversion]; Region: CcmK; COG4577" /db_xref="CDD:443634" regulatory 1181704..1181709 /regulatory_class="ribosome_binding_site" gene 1181720..1182421 /locus_tag="lmo1152" /db_xref="GeneID:986154" CDS 1181720..1182421 /locus_tag="lmo1152" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PduB protein" /protein_id="NP_464677.1" /db_xref="GeneID:986154" /translation="MSEKAVQLTEFVGTAIGDTIGLVIANVDGQLLEAMKLEKSYRSI GILGARTGAGPHIMAADEAVKATNTEVVKIELPRDTKGGAGHGSLIIFGGDDVSDVKR AVEVALNELDKTFGDVYGNEAGHIELQYTARASHALEKAFGAPVGKAFGLMVGAPAGI GVVMADTAVKSANVDVVAYSSPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLL GALGDEPKNDRPSYI" misc_feature 1181720..1182418 /locus_tag="lmo1152" /note="propanediol utilization microcompartment protein PduB; Region: PRK15415" /db_xref="CDD:185313" regulatory 1182424..1182429 /regulatory_class="ribosome_binding_site" gene 1182440..1184104 /locus_tag="lmo1153" /db_xref="GeneID:986155" CDS 1182440..1184104 /locus_tag="lmo1153" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="propanediol dehydratase subunit alpha" /protein_id="NP_464678.1" /db_xref="GeneID:986155" /translation="MKSKRFEELAKRPVNQDGFVKEWIEEGLIAMESPNDPKPSIKIE NGKVVEMDSKKLADFDLIDHFIAKYGVDLSRAEEVMQMDSVKLANMLCDPNVPREKIV LLTTAMTPAKIVEVVSQMNVVEMMMSMQKMRSRRTPTTQAHVTNLRDNPVQIAADAAE AAIRGFDEQETTVAVVRYAPFNALSLLVGSQTGRGGVLTQCSLEEATELELGMRGLTC YAETISVYGTEPVFTDGDDTPWSKGILASAYASRGLKMRFTSGTGSEVQMGYAEGKSM LYLESRCIFITKAAGVQGLQNGSISCIGIPGAVPSGIRAVLAENLIAVMLDLEVASGN DQTFSHSDIRRTARLLMQFLPGTDYISSGYSATPNYDNMFAGSNFDADDFDDYNILQR DLKVDGGLTPVTEEEVVAVRNKAARVIQAVFDKLGLPEVTDAEVEAATYARGSKDMPE RNMVEDIKAAAEMMDRGVTGLDVVKALSAGGFDDVAESVLNMLKQRVSGDFLHTSAII DKDWNVISSVNDLNDYAGPGTGYRLEGERWEKLKDIAVAVDANELD" misc_feature 1182440..1184095 /locus_tag="lmo1153" /note="Dehydratase large subunit; Region: Dehydratase_LU; pfam02286" /db_xref="CDD:426700" misc_feature order(1182464..1182466,1182473..1182475,1182482..1182484, 1182494..1182502,1182506..1182508,1182704..1182706, 1182716..1182718,1182722..1182724,1182794..1182796, 1182800..1182802,1182809..1182811,1182827..1182829, 1182908..1182910,1182917..1182919,1183361..1183363, 1183367..1183372,1183376..1183381,1183460..1183462, 1183466..1183471,1183475..1183477,1183535..1183537, 1183580..1183588,1183592..1183597,1183604..1183606, 1183613..1183618,1183652..1183654,1183760..1183762, 1183766..1183768,1183778..1183780,1184009..1184011, 1184015..1184020,1184033..1184035,1184081..1184083, 1184087..1184089) /locus_tag="lmo1153" /note="alpha-alpha subunit/dimer interface [polypeptide binding]; other site" /db_xref="CDD:239658" misc_feature order(1182491..1182493,1182515..1182517,1182878..1182880, 1182968..1182970,1183139..1183144,1183238..1183240, 1183247..1183249,1183340..1183342,1183349..1183351, 1183445..1183450,1183457..1183459,1183547..1183549, 1183553..1183555,1183559..1183567) /locus_tag="lmo1153" /note="alpha-beta subunit interface [polypeptide binding]; other site" /db_xref="CDD:239658" misc_feature order(1182620..1182622,1182644..1182646,1183049..1183054, 1183124..1183126,1183136..1183138,1183145..1183153, 1183157..1183162,1183166..1183168,1183178..1183180, 1183190..1183195,1183301..1183312,1183418..1183420, 1183850..1183852,1183886..1183888,1183916..1183921, 1183928..1183939,1183946..1183951,1183976..1183981, 1183985..1183987) /locus_tag="lmo1153" /note="alpha-gamma subunit interface [polypeptide binding]; other site" /db_xref="CDD:239658" misc_feature order(1182860..1182862,1182866..1182868,1182947..1182949, 1182953..1182955,1183043..1183045,1183052..1183054, 1183100..1183105,1183139..1183141,1183238..1183243, 1183325..1183327,1183442..1183447,1183523..1183525, 1183556..1183561) /locus_tag="lmo1153" /note="active site" /db_xref="CDD:239658" misc_feature order(1182860..1182862,1182866..1182868,1182947..1182949, 1183100..1183105,1183325..1183327,1183442..1183447, 1183523..1183525) /locus_tag="lmo1153" /note="substrate and K+ binding site [active]" /db_xref="CDD:239658" misc_feature order(1182860..1182862,1182947..1182949,1183100..1183102, 1183325..1183327) /locus_tag="lmo1153" /note="K+ binding site [ion binding]; other site" /db_xref="CDD:239658" misc_feature order(1182953..1182955,1183043..1183045,1183052..1183054, 1183103..1183105,1183139..1183141,1183238..1183243, 1183445..1183447,1183556..1183561) /locus_tag="lmo1153" /note="cobalamin binding site [chemical binding]; other site" /db_xref="CDD:239658" regulatory 1184126..1184131 /regulatory_class="ribosome_binding_site" gene 1184142..1184801 /locus_tag="lmo1154" /db_xref="GeneID:986151" CDS 1184142..1184801 /locus_tag="lmo1154" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="diol dehydratase subunit gamma" /protein_id="NP_464679.1" /db_xref="GeneID:986151" /translation="MVEINEKVLRGIISEVLDELQLKEDKVSFQKEQPSVAVSDESFL TEVGDAEPGRQKDEVVIAVAPAFGKYQTKNIVGVPHKQILRELIAGIEEEGLKARVVR VFRSSDVAFVAVEGDKLSGSGICIGIQSRGTALIHQKDLQPLSNLELFPQAPLITLET YRAIGKNAAKYAKGESPNPVPMVNDQMARPKFQAKAALLHIKETKHVVQGKNAVELQV N" misc_feature 1184145..1184798 /locus_tag="lmo1154" /note="propanediol/glycerol family dehydratase medium subunit; Region: pduD; PRK15042" /db_xref="CDD:237886" regulatory 1184804..1184809 /regulatory_class="ribosome_binding_site" gene 1184818..1185330 /locus_tag="lmo1155" /db_xref="GeneID:986153" CDS 1184818..1185330 /locus_tag="lmo1155" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="diol dehydratase subunit gamma" /protein_id="NP_464680.1" /db_xref="GeneID:986153" /translation="MNQEALENMVRNILQEVNSGGVSTTTSQKVSGDTLTVRDYPLGT KRPELVKTSTSKSLDDITLKSVLDGTIKPEDVRVTAETLKMQAQVARDAGRATLANNF ERAAELTIVPDERILEIYNAMRPYRSSREELLAIADELESVYHATICSNYVREAAQLY QERKKLKGDN" misc_feature 1184818..1185321 /locus_tag="lmo1155" /note="Propanediol dehydratase, small subunit [Secondary metabolites biosynthesis, transport and catabolism]; Region: PduE; COG4910" /db_xref="CDD:443938" regulatory 1185330..1185331 /regulatory_class="terminator" regulatory 1185363..1185368 /regulatory_class="ribosome_binding_site" gene 1185375..1187195 /locus_tag="lmo1156" /db_xref="GeneID:986150" CDS 1185375..1187195 /locus_tag="lmo1156" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="diol dehydratase-reactivating factor large subunit" /protein_id="NP_464681.1" /db_xref="GeneID:986150" /translation="MKYIAGIDIGNSTTEVALAMANSSKEAAFVASAITDTTGIKGTK QNLHGIFKALRLALEKVNATTEDLAEIRINEATPVIGDVAMETITETIITESTMIGHN PKTPGGLGMGSGVTVLLDDVTSKSKDADYIVIIPKTVDFEDAAKQINTYVENGYQITA AILQADDGVLVHNRLNHKIPIVDEVGFIDKVPVDMLAAVEVAAPGKVIETISNPYGIA TVFHLNSDETKNIIPVARALIGNRSAVVIKTPEGDVKARTIPAGHIELQSGSRTQRVN VAEGSEKIMQAIMSLPKLDNASGEPGTNIGGMLEKVRQTMAGLTDKLPADIFIQDLLA VDTFVPVDVQGGLAGEFSMEQAVGIASMVKSDHLQMAAIASEIEQELQVSVKIGGAEA EAAILGALTTPGTNTPLAILDLGAGSTDASIINGKGEIIATHLAGAGDMVTMIIQSEI GLEDRYLAEDIKKYPLAKVESIFHIRHEDGTVQFFDTPLSPTVFAKVVIVKPDGFVPI PGDVSIEKIKLIRRSAKERVFVTNTIRALKYVSPTGNIRDIPFVVIVGGSALDFEIPQ LITDALSHYSLVAGRGNIRGKEGPRNAVATGLILAGGAKA" misc_feature 1185381..1187177 /locus_tag="lmo1156" /note="diol dehydratase reactivase alpha subunit; Region: reactive_PduG; TIGR04491" /db_xref="CDD:275284" regulatory 1187177..1187182 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1156" gene 1187192..1187539 /locus_tag="lmo1157" /db_xref="GeneID:986152" CDS 1187192..1187539 /locus_tag="lmo1157" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="diol dehydratase-reactivating factor small subunit" /protein_id="NP_464682.1" /db_xref="GeneID:986152" /translation="MIPVVSKPAIYFHADVDANPDSIKQVLFGIEEEGIPCELEIMPL KDEVQAAFRASASSPLLVGVTLKNDHLVIHYRNLPPDKPLFSAHRFCASTLENQRNMG MNAARLVKGVPFK" misc_feature 1187213..1187533 /locus_tag="lmo1157" /note="Dehydratase medium subunit; Region: Dehydratase_MU; pfam02288" /db_xref="CDD:426702" regulatory 1187539..1187544 /regulatory_class="ribosome_binding_site" gene 1187552..1187989 /locus_tag="lmo1158" /db_xref="GeneID:986149" CDS 1187552..1187989 /locus_tag="lmo1158" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PduK protein" /protein_id="NP_464683.1" /db_xref="GeneID:986149" /translation="MHQAIGIIEIKGLASAIAVADTMAKVANIQLVDTEKAKGFGWIT VKVEGDVAAVNAALEAGEQTAIASDSFIAKKVIPRPGEEIFTVFWPKEEIEPEKPEVM VETEKVEETEAPTEATCNLCHDPLCPRVKGDPRQDCIHFEEEK" misc_feature 1187561..1187791 /locus_tag="lmo1158" /note="1,2-propanediol utilization protein K (PduK), Bacterial Micro-Compartment (BMC) domain repeat 1l; Region: BMC_PduK; cd07056" /db_xref="CDD:132896" misc_feature order(1187576..1187578,1187585..1187587,1187612..1187614, 1187621..1187626,1187642..1187644,1187657..1187659, 1187675..1187677) /locus_tag="lmo1158" /note="putative hexamer interface [polypeptide binding]; other site" /db_xref="CDD:132896" misc_feature 1187657..1187659 /locus_tag="lmo1158" /note="putative hexagonal pore [active]" /db_xref="CDD:132896" regulatory 1188000..1188005 /regulatory_class="ribosome_binding_site" gene 1188014..1188289 /locus_tag="lmo1159" /db_xref="GeneID:986147" CDS 1188014..1188289 /locus_tag="lmo1159" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carboxysome structural protein" /protein_id="NP_464684.1" /db_xref="GeneID:986147" /translation="MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTV MVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPHNDVETLLQKGL" misc_feature 1188014..1188271 /locus_tag="lmo1159" /note="Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN [Secondary metabolites biosynthesis, transport and catabolism, Energy production and conversion]; Region: CcmK; COG4577" /db_xref="CDD:443634" regulatory 1188277..1188282 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1159" gene 1188293..1188928 /locus_tag="lmo1160" /db_xref="GeneID:986142" CDS 1188293..1188928 /locus_tag="lmo1160" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PduL protein" /protein_id="NP_464685.1" /db_xref="GeneID:986142" /translation="MEREELKAIIKQIVADKLSGAETEIPIGVSNRHIHLTETDYNQL FPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARML GMKIPIRVSGDIEGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVANEFGVKQGDEV SVLVGSEMRSLVLNHCTIRVNNQFIPEMHIDTDEANAADIAGTNFAKIIKS" misc_feature 1188293..1188925 /locus_tag="lmo1160" /note="phosphate propanoyltransferase; Region: PRK15070" /db_xref="CDD:237899" regulatory 1188936..1188941 /regulatory_class="ribosome_binding_site" gene 1188949..1189788 /locus_tag="lmo1161" /db_xref="GeneID:986144" CDS 1188949..1189788 /locus_tag="lmo1161" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ethanolamine utilization protein EutJ" /protein_id="NP_464686.1" /db_xref="GeneID:986144" /translation="MDILQTANERMEQLAALMNKDIEQKIPAGEKVKVGVDLGTSSIV FVVLDENNVPLFGAFEFADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASGAI PPGTVGNNKKVVANVIESAGMEALYTIDEPTAAAAVLDLQNGAVVDVGGGTTGISVFE NGEVIYTADEPTGGTHMTLVLAGYYGVPVEEAEQNKRAQKDSSEHFSVMRPVVEKMAE ITRVHLEKSPSEPLYIVGGASAYSQFKDTFESYLKMPVFQPNYPQYVTPLGIAMSSGS ENL" misc_feature 1188970..1189785 /locus_tag="lmo1161" /note="Ethanolamine utilization protein EutJ, possible chaperonin [Amino acid transport and metabolism]; Region: EutJ; COG4820" /db_xref="CDD:443848" regulatory 1189770..1189775 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1161" gene 1189785..1190264 /locus_tag="lmo1162" /db_xref="GeneID:986141" CDS 1189785..1190264 /locus_tag="lmo1162" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1162" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464687.1" /db_xref="GeneID:986141" /translation="MIEKLVEIIVQRMKLRATSKTSIAISKLPRDPVAIFMESGTVRL TQVNKHFLERILGGNRAESLTVWFEKAADYGVTIELELYDNGEPWLDYTMLSQLNYPV FTSNGERLFHASNQVVCYGDSAVIPSGSTLCKYKKQLITPLANEYLTKNNIAVRERQ" misc_feature 1189791..1190246 /locus_tag="lmo1162" /note="Putative propanediol utilization; Region: PDU_like; pfam15953" /db_xref="CDD:435036" regulatory 1190256..1190261 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1162" gene 1190269..1190532 /locus_tag="lmo1163" /db_xref="GeneID:986140" CDS 1190269..1190532 /locus_tag="lmo1163" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carbon dioxide concentrating mechanism protein" /protein_id="NP_464688.1" /db_xref="GeneID:986140" /translation="MFMAKITGSVVSTKKEDSLTGKKLMIVQPVDANGEHVRSEEVAC DSVGAGIGEYVLVARGNAARSVFAEPNSAIDSAIIAIVDSFDK" misc_feature 1190269..1190526 /locus_tag="lmo1163" /note="Carboxysome shell and ethanolamine utilization microcompartment protein CcmK/EutM [Secondary metabolites biosynthesis, transport and catabolism, Energy production and conversion]; Region: CcmL; COG4576" /db_xref="CDD:443633" regulatory 1190532..1190537 /regulatory_class="ribosome_binding_site" gene 1190547..1191542 /locus_tag="lmo1164" /db_xref="GeneID:986139" CDS 1190547..1191542 /locus_tag="lmo1164" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP:cob(I)alamin adenosyltransferase PduO" /protein_id="NP_464689.1" /db_xref="GeneID:986139" /translation="MSIYTKTGDKGTTALFDGNRVKKYDDRVETYGSFDELNAEISVA EKFVTSAENKSLLRNVERQLFYVCAELATEHEASLASKIIITENDINQLEKVIDDYTA KLPKVDSFVLPGSSTAGAFLHSARTVARRGERLLVRLSEQTDIRKELLKFVNRLSDFL YILAREEDFRQMLDKATKLIVAKYLEQTGQEKSVTSDLSFSFCEKLMHQVCIVSEEIG VPVTLAIVDAHGNARFNYRMEHALLVSAELATKKAYSAVAMKTSTEKLTEAVQPGAPL YQLETLTNGDIVTFGGGVPIYGKDGAIIGGMGISGGSVEEDIHIAKKALSMIEKG" misc_feature 1190547..1191059 /locus_tag="lmo1164" /note="Cob(II)alamin adenosyltransferase [Coenzyme transport and metabolism]; Region: PduO; COG2096" /db_xref="CDD:441699" misc_feature 1191129..>1191437 /locus_tag="lmo1164" /note="Heme-binding protein HbpS, GlcG/HbpS family [Signal transduction mechanisms]; Region: GlcG; COG3193" /db_xref="CDD:442426" regulatory 1191534..1191539 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1164" gene 1191549..1192958 /locus_tag="lmo1165" /db_xref="GeneID:986133" CDS 1191549..1192958 /locus_tag="lmo1165" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ethanolamine utilization protein EutE" /protein_id="NP_464690.1" /db_xref="GeneID:986133" /translation="MESLELEKLVKKVLLEKLAEQKGIPVKTMTKGAKSGVFDTVDEA VQAAVIAQNSYKEKSLEERRNVVKAIREALYPEIESIAARAVAETGMGNVADKILKNT LAIEKTPGVEDLYTEVATGDNGMTLYELSPYGVIGAVAPSTNPTETLICNTIGMLAAG NAVFYSPHPGAKNISLWLIEKLNTIVRESCGVDNLVVTVEKPSIQAAQEMMNHPKVPL LVITGGPGVVLQAMQSGKKVIGAGAGNPPSIVDETANIEKAAADIVDGASFDHNILCI AEKSVVAVDSIADFLMFQMEKNGALHVTNPSDIQKLEKVAVTDKGVTNKKLVGKSASE ILKEAGIACDFSPRLIIVETEKTHPFATVELLMPIVPVVRVPNFEEALEVAIELEQGL HHTATMHSQNISRLNKAARDMQTSIFVKNGPSFAGLGFRGEGSTTFTIATPTGEGTTT ARHFARRRRCVLTDGFSIR" misc_feature 1191549..1192955 /locus_tag="lmo1165" /note="aldehyde dehydrogenase; Region: PRK15398" /db_xref="CDD:237956" misc_feature 1192371..1192373 /locus_tag="lmo1165" /note="putative catalytic cysteine [active]" /db_xref="CDD:143439" regulatory 1192960..1192965 /regulatory_class="ribosome_binding_site" gene 1192974..1194092 /locus_tag="lmo1166" /db_xref="GeneID:986134" CDS 1192974..1194092 /locus_tag="lmo1166" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="NADPH-dependent butanol dehydrogenase" /protein_id="NP_464691.1" /db_xref="GeneID:986134" /translation="MNSFQIKTKVAFGTNSLQVLKEIKNKNVWIICDRFLADGEGLQG LIGQLDASNNVHIFTDVVPDPPISKVAGGVSEAGKIQPQVMIAFGGGSAIDTAKGIYY FAKRLEKINISTFIAIPTTSGTGSEVTAATVITDPTTKIKYPLFLDELIPDMAILDAQ LVVTVPPAITANTGMDVLTHAIEAYVSKDASDYTDALGEKSVQLTLRFLTSCYDDGRN LADREKMHNASTMAGMAFNCANLGLNHSIAHQLGAQFHVPHGLANAILLDAVIRFNAF KNRETEQKYAEMARICGIASRSDSNETAVRLLRERIVAMMEHMQMPRTLTDAGVAKEK VYAKMDEIATNALKDACLPTSPTTPTHQELKEILEQII" misc_feature 1192983..1194080 /locus_tag="lmo1166" /note="1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism; Region: PDD; cd08180" /db_xref="CDD:341459" misc_feature order(1193070..1193072,1193241..1193249,1193256..1193258, 1193265..1193267,1193331..1193336,1193340..1193342, 1193397..1193402,1193454..1193456,1193478..1193480, 1193499..1193501,1193511..1193513,1193706..1193708, 1193718..1193720,1193748..1193750) /locus_tag="lmo1166" /note="putative active site [active]" /db_xref="CDD:341459" misc_feature order(1193499..1193501,1193511..1193513,1193706..1193708, 1193748..1193750) /locus_tag="lmo1166" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:341459" regulatory 1194107..1194112 /regulatory_class="ribosome_binding_site" gene 1194120..1194824 /gene="glpF" /locus_tag="lmo1167" /db_xref="GeneID:986131" CDS 1194120..1194824 /gene="glpF" /locus_tag="lmo1167" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycerol uptake facilitator protein" /protein_id="NP_464692.1" /db_xref="GeneID:986131" /translation="MSAYLAEFIGTMVLIMFGNGLLAGLTLNKSLSQGANWVVVTFGW GFAVMIGIYVAGAYSGAHLNPAVTIALAVGGSFPWADVVPYIIAQIAGAFVGASIVIL HYYPHFKATPPEIDTHGIFSTGPAIRNTPFNLISEIIATFAFIFGLLMIGANSFTDGL NPLILGFLVVAIGMSFGPTTGYAINPARDLGPRLAYFLLPVPNKSGSDWRYAWIPIVG PIIGGLLAIGLFNILL" misc_feature 1194120..1194821 /gene="glpF" /locus_tag="lmo1167" /note="Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) [Carbohydrate transport and metabolism]; Region: GlpF; COG0580" /db_xref="CDD:440345" regulatory 1194877..1194882 /regulatory_class="ribosome_binding_site" gene 1194890..1196083 /gene="AckA2" /locus_tag="lmo1168" /db_xref="GeneID:986132" CDS 1194890..1196083 /gene="AckA2" /locus_tag="lmo1168" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acetate kinase" /protein_id="NP_464693.1" /db_xref="GeneID:986132" /translation="MHKIMAINAGSSSLKFQIFTMPGEEVLVKGLIERIGLPDAIFNM SFQNEKIKETRAINDHGKAVEILLEQLKAHQVINDLSEITGVGHRVAHGGEDFVTSCV VTDEVVKGIEAVTNLAPLHNPANIIGIKTFRELLPNAVSVAVFDTAFHQTIPQENFLY ALPYELYEKHHIRKYGFHGTSHKYVAGKAAEVLEKPLEKLKIISCHLGNGASVCAIEA GKSVNTSMGFTPNAGLMMGTRSGTIDATIIPYLVDELGYSLDEVMHMMSNESGVLGVS GISSDFRDIEIAAKEGNSRALLTLRMFTGQICNYIGAYASAMNGCDALLFTAGVGENS PLIRQMVTEQLSYLGVTCHVTKNNAGDMIISNDNEAVKVCIIPTNEELMIARDVEKYA KQTIG" misc_feature 1194896..1196053 /gene="AckA2" /locus_tag="lmo1168" /note="Acetate kinase [Energy production and conversion]; Region: AckA; COG0282" /db_xref="CDD:440051" regulatory 1196083..1196088 /regulatory_class="ribosome_binding_site" gene 1196097..1197182 /gene="cobD" /locus_tag="lmo1169" /db_xref="GeneID:986129" CDS 1196097..1197182 /gene="cobD" /locus_tag="lmo1169" /EC_number="4.1.1.81" /experiment="EXISTENCE:[PMID:19448609]" /note="cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin" /codon_start=1 /transl_table=11 /product="threonine-phosphate decarboxylase" /protein_id="NP_464694.1" /db_xref="GeneID:986129" /translation="MKITTASHGGNYNELAKQHGLTKEMVLDFSANINPLGVPASLKQ TITANLDKLVEYPEPDYLALRARIASFHQLDLANVIPGNGATELIFGIAKVTKAQKVL LLAPTFAEYERAFFDAEIVYAELTKETNFAAVEIVLEILERDTEIEAVCLCNPNNPTG QLIAQQEMIKIADLCEKRNIYLIIDEAFMDFLEENETISMINNLERFPHVAIIRAFTK FFAIPGLRLGYLLTKNDLLAEALMQMREPWSINTFADLAGQMLLEDEAYIRQTFDWIN EERDFLYRGLSRFSALTVYRPTVNYIFFHLEKPLDLRKELLLKGIFIRSCANYRGLTE NYYRVAVKSRADNSQLLTALEVIFSGN" misc_feature 1196118..1197158 /gene="cobD" /locus_tag="lmo1169" /note="L-threonine-O-3-phosphate decarboxylase; Region: L_thr_O3P_dcar; TIGR01140" /db_xref="CDD:273466" regulatory 1197160..1197166 /regulatory_class="ribosome_binding_site" /gene="cobD" /locus_tag="lmo1169" gene 1197172..1198047 /locus_tag="lmo1170" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986128" CDS 1197172..1198047 /locus_tag="lmo1170" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PduX protein" /protein_id="NP_464695.1" /db_xref="GeneID:986128" /translation="MEIKTRCPASCGELLQGWILGGEKLISYPINWYSEVTLSDKVGL NSSGHTKAWLAFQVTCEYFGVAKRDLPQVSLQVKSTIPVAKGMASSTADIAATIGATA KWLNKSITEIEIVKLCLKLEPTDSTIFESLTLFDHLKGDVIQNFNWIPKLGVVVLEPL TVLETATYRQENHQAQLLKNEGQLAKAMDYFQQAVTQKSIRLLGEAASISAACNQTIL PKPFWKEILEVTENLDLVGLNVSHSGTVVGILYELEKTDPLEILFELERRYVTTFYSR YYFREFVSGGVQIIS" misc_feature 1197175..1198035 /locus_tag="lmo1170" /note="PduX protein involved in propanediol utilization and related proteins [Secondary metabolites biosynthesis, transport and catabolism]; Region: PduX; COG4542" /db_xref="CDD:443608" gene 1198107..1198389 /locus_tag="lmos43" /db_xref="GeneID:18245194" misc_RNA 1198107..1198389 /locus_tag="lmos43" /product="rli55" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245194" regulatory 1198624..1198629 /regulatory_class="ribosome_binding_site" gene 1198637..1199776 /gene="pduQ" /locus_tag="lmo1171" /db_xref="GeneID:986125" CDS 1198637..1199776 /gene="pduQ" /locus_tag="lmo1171" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="NADPH-dependent butanol dehydrogenase" /protein_id="NP_464696.1" /db_xref="GeneID:986125" /translation="MQKVSFKTDLYIGQGATDRLLDFKDKQIFIVTDPFMVSSGMINA ITDKIDQSNTYTIFSEIIPDPPIENVVAGIEVLNECDANLMIAIGGGSAIDAAKAMKF FGQKLGTVRAMPFIVIPTTSGTGSEVTSFSVITNKEKAIKYPLITDAILPDEAILDAD LVKSVPPAITADTGMDVLTHALEAYVSTKANDYSDAMAEKVIQLVFTYLERAYKDGND LEAREKMHNASCLAGMAFNITSLGLNHGIAHTAGAKFKIPHGRMNTLLLPHVISYNAG ITSDFGNNPDNRAAERYTAIAKLLKMPASNTRLGVRSLINAIKQLQKKLNMPTTLTEC GISRTDLNENIAQIAEGALNDGCTATNPRTPTETDVSAILEKMLA" misc_feature 1198649..1199761 /gene="pduQ" /locus_tag="lmo1171" /note="1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism; Region: PDD; cd08180" /db_xref="CDD:341459" misc_feature order(1198733..1198735,1198904..1198912,1198919..1198921, 1198928..1198930,1198994..1198999,1199003..1199005, 1199060..1199065,1199117..1199119,1199141..1199143, 1199162..1199164,1199174..1199176,1199369..1199371, 1199381..1199383,1199411..1199413) /gene="pduQ" /locus_tag="lmo1171" /note="putative active site [active]" /db_xref="CDD:341459" misc_feature order(1199162..1199164,1199174..1199176,1199369..1199371, 1199411..1199413) /gene="pduQ" /locus_tag="lmo1171" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:341459" gene 1199859 /locus_tag="lmos02" /db_xref="GeneID:18245121" regulatory 1200038..1200043 /regulatory_class="ribosome_binding_site" gene 1200051..1200632 /locus_tag="lmo1172" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986126" CDS 1200051..1200632 /locus_tag="lmo1172" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_464697.1" /db_xref="GeneID:986126" /translation="MTGMNGRIVIADDEPITRMDIRDILEEANYNVVGEATDGFEAIE LCKSHQPDLVIMDIQMPLLDGLKAGKRIISEGLAGGIILLTAFSDPKNTEKAKGFGAL GYLVKPLDEKSLIPTVEMSIAKGRETRKLEQQLEKLTKKLEERKVIEKAKGVLMIENN ITEEEAYNMIRNLSMDKRCPMMEIAETIVMSDD" misc_feature 1200051..1200629 /locus_tag="lmo1172" /note="Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains [Signal transduction mechanisms, Transcription]; Region: AmiR; COG3707" /db_xref="CDD:442921" regulatory 1200615..1200620 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1172" gene 1200625..1202082 /locus_tag="lmo1173" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986122" CDS 1200625..1202082 /locus_tag="lmo1173" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component sensor histidine kinase" /protein_id="NP_464698.1" /db_xref="GeneID:986122" /translation="MTKTIREMCLRYTDLSEHDIDELIHTAQSLSVSAMYQDVDVFID VYNKLTSEALVIHHTPPKTTKSLYKNKVVGETALRSNEPGVLRTLETGMNSNDLLAKT QENVLIRQKVYPIRNKQRVIAVLILENDISAEIKAHFEIDNEETAYRDVSTTLSAMSK LTDSITDQLDDAILIFDRNGILQQKNCAADQYYERLGYMEDIQGMHYDNLSLDQMMFD AIMYQIETGKQPIQLKKEVVIAGNYFIMKQIFVKEEDEQECRFILILHDITDIKVKEA EIVSKSVAIREIHHRVKNNLQSVVSLLRIQGRRSTSMEAQKILNESVSRILAIAATHE LLSKQMEDGINLYMVIETVAYNIERCCTDCPKVAVRMDIDKRIYLDSDRTVALALVMN ELLQNSYDHAFHPNESGEILLQIKEEKNIIHAEVTDNGHGFNVRKVSEKSLGLSIVKS YIKDKLRGKVTIESNEHGTKTMFDFKYNSIHATKK" misc_feature 1200625..1202052 /locus_tag="lmo1173" /note="Two-component sensor histidine kinase, HisKA and HATPase domains [Signal transduction mechanisms]; Region: COG3920" /db_xref="CDD:443125" regulatory 1202101..1202140 /regulatory_class="terminator" regulatory 1202158..1202163 /regulatory_class="ribosome_binding_site" gene 1202171..1203592 /gene="eutA" /locus_tag="lmo1174" /db_xref="GeneID:986123" CDS 1202171..1203592 /gene="eutA" /locus_tag="lmo1174" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ethanolamine utilization protein EutA" /protein_id="NP_464699.1" /db_xref="GeneID:986123" /translation="MTETILSVGIDLGTSTTQLILSELEIQNMASSFTVPRIVISDKR IIFRSEILFTPILADNLIDVEAIRDFVTKEYANAGIKKEEIGMGAVIITGETARKDNA SNVLDAMSGFAGDFVVATAGPDLESIIAGKGAGAHTYAKENNTSVVNLDIGGGTTNLS LFDRGELIDTACLDIGGRLIKVDRETRKITYIAPKIQALIEKRGYPVKLGETTSPENL QPVLGEMVELLKNSVGLGAPNDFYETIITNKGLKFLTEIECISFSGGVADCISTGALS DPFRYGDIGLLLGKAIAESSLMTEKKYIESVETIRATVVGAGSHTAEISGSTITYTEK IFPVKNIPILKLAKQEEDENMAEVIKEKLSWFKIENEMEHIALAIEGENSPSFQQVTE YAKAICEGMKEPISLGHPLIIITWHDMAKALGQSIFGHLPAGHPLICLDSVKVDNGDY IDIGKPVADGKVLPVVVKTLVFN" misc_feature 1202171..1203589 /gene="eutA" /locus_tag="lmo1174" /note="ethanolamine ammonia-lyase reactivating factor EutA; Region: eutA; PRK10719" /db_xref="CDD:236743" regulatory 1203619..1203624 /regulatory_class="ribosome_binding_site" gene 1203634..1204998 /gene="eutB" /locus_tag="lmo1175" /db_xref="GeneID:986127" CDS 1203634..1204998 /gene="eutB" /locus_tag="lmo1175" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ethanolamine ammonia-lyase large subunit" /protein_id="NP_464700.1" /db_xref="GeneID:986127" /translation="MILKTNLFGHTYQFKSITDVLAKANEEKSGDRLAGVAAESAEER VAAKVVLSKMTLGDLRNNPVVPYETDEVTRIIQDQVNDRIHDSIKNWTVEELREWILD HKTTDADIKRVARGLTSEIIAAVTKLMSNLDLIYGAKKIRVIAHANTTIGLPGTFSAR LQPNHPTDDPDGILASLMEGLTYGIGDAVIGLNPVDDSTDSVVRLLNKFEEFRSKWDV PTQTCVLAHVKTQMEAMRRGAPTGLVFQSIAGSEKGNTAFGFDGATIEEARQLALQSG AATGPNVMYFETGQGSELSSDAHFGVDQVTMEARCYGFAKKFDPFLVNTVVGFIGPEY LYDSKQVIRAGLEDHFMGKLTGISMGCDVCYTNHMKADQNDVENLSVLLTAAGCNFIM GIPHGDDVMLNYQTTGYHETATLRELFGLKPIKEFDQWMEKMGFSENGKLTSRAGDAS IFLK" misc_feature 1203637..1204995 /gene="eutB" /locus_tag="lmo1175" /note="Ethanolamine ammonia-lyase, large subunit [Amino acid transport and metabolism]; Region: EutB; COG4303" /db_xref="CDD:443444" regulatory 1205003..1205008 /regulatory_class="ribosome_binding_site" gene 1205018..1205899 /gene="eutC" /locus_tag="lmo1176" /db_xref="GeneID:986120" CDS 1205018..1205899 /gene="eutC" /locus_tag="lmo1176" /EC_number="4.3.1.7" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of acetaldehyde from ethanolamine" /codon_start=1 /transl_table=11 /product="ethanolamine ammonia-lyase small subunit" /protein_id="NP_464701.1" /db_xref="GeneID:986120" /translation="MNEQELKQMIEGILTEMSGGKTTDTVAAVPTKSVVETVVTEGSI PDITEVDIKKQLLVPEPADREGYLKMKQMTPARLGLWRAGPRYKTETILRFRADHAVA QDSVFSYVSEDLVKEMNFIPVNTKCQDKDEYLTRPDLGREFDDEMVEVIRANTTKNAK LQIVVGDGLSSAAIEANIKDILPSIKQGLKMYNLDFDNIIFVKHCRVPSMDKIGEITG ADVVCLLVGERPGLVTAESMSAYIAYKPTVGMPEARRTVISNIHSGGTPPVEAGAYIA ELIHNMLEKKCSGIDLK" misc_feature 1205171..1205896 /gene="eutC" /locus_tag="lmo1176" /note="ethanolamine ammonia-lyase subunit EutC; Region: PRK05465" /db_xref="CDD:235482" regulatory 1205909..1205914 /regulatory_class="ribosome_binding_site" gene 1205922..1206575 /locus_tag="lmo1177" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986121" CDS 1205922..1206575 /locus_tag="lmo1177" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carboxysome structural protein EutL" /protein_id="NP_464702.1" /db_xref="GeneID:986121" /translation="MKNDKLPASVLSVKVVSNVDNGLFKQLDLKPHQRSLGIITSDCD DVTYTALDEATKAAEVDVVYAKSMYAGAGNASTKFAGEVIGIIAGPSPAEVKSGLAVA VDFIENGASFVSANEDDSVPYFAHCVSRTGTFLSKEANVAEGEAIAYLIAPPLEAMYA LDAALKAADVTIGAFYGPPSETNFGGALLTGSQSACKAACDAFKMAVENVAENPLQY" misc_feature 1205922..1206572 /locus_tag="lmo1177" /note="ethanolamine utilization microcompartment protein EutL; Region: PRK15405" /db_xref="CDD:185303" regulatory 1206575..1206580 /regulatory_class="ribosome_binding_site" gene 1206590..1207111 /locus_tag="lmo1178" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986118" CDS 1206590..1207111 /locus_tag="lmo1178" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carboxysome structural protein" /protein_id="NP_464703.1" /db_xref="GeneID:986118" /translation="MPNEALGLIEVTGFLGAVVAADTCLKAANVELIQCEVISGGLTT VELTGDVGAVNAAIEAGKAATEDLGCLVSSHVIARMSEDTKALFVPQEEAKPQPKEIK QEEPKEVIQKVVEVNTNTKSTEKKLRAMKVIDLRKLAYTLDNVPIPKSKIKYANKDKL VHALKDIYGRSEN" misc_feature 1206602..1206853 /locus_tag="lmo1178" /note="Carbon dioxide concentrating mechanism K (CcmK)-like proteins, Bacterial Micro-Compartment (BMC) domain; Region: BMC_CcmK_like; cd07045" /db_xref="CDD:132885" misc_feature order(1206617..1206619,1206626..1206628,1206653..1206655, 1206662..1206667,1206683..1206685,1206698..1206700, 1206707..1206715,1206806..1206814,1206818..1206820, 1206824..1206829,1206836..1206838) /locus_tag="lmo1178" /note="Hexamer interface [polypeptide binding]; other site" /db_xref="CDD:132885" misc_feature 1206698..1206700 /locus_tag="lmo1178" /note="Hexagonal pore residue [active]" /db_xref="CDD:132885" regulatory 1207097..1207102 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1178" gene 1207111..1208571 /locus_tag="lmo1179" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986119" CDS 1207111..1208571 /locus_tag="lmo1179" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase" /protein_id="NP_464704.1" /db_xref="GeneID:986119" /translation="MALEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIA DAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKV MEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGVG PGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGA HFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEETKVGA KIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKK PVSRLLVNTPGALGGIGATTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRIATGVL ELEDIRKEENQATSELPVDADALIQSLVEKVLAELK" misc_feature 1207123..1208568 /locus_tag="lmo1179" /note="acetaldehyde dehydrogenase (acetylating); Region: EutH_ACDH; TIGR02518" /db_xref="CDD:131570" misc_feature 1207861..1207863 /locus_tag="lmo1179" /note="putative catalytic cysteine [active]" /db_xref="CDD:143440" regulatory 1208588..1208593 /regulatory_class="ribosome_binding_site" gene 1208603..1208887 /locus_tag="lmo1180" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986115" CDS 1208603..1208887 /locus_tag="lmo1180" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carboxysome structural protein" /protein_id="NP_464705.1" /db_xref="GeneID:986115" /translation="MANANALGMIETKGLVGAVEAADAMVKAANVTLMGKEQVGGGLV TVMVRGDVGAVKAATDAGAAAAERVGELLSVHVIPRPHSEVDAILPKSAE" misc_feature 1208615..1208866 /locus_tag="lmo1180" /note="Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN [Secondary metabolites biosynthesis, transport and catabolism, Energy production and conversion]; Region: CcmK; COG4577" /db_xref="CDD:443634" regulatory 1209040..1209045 /regulatory_class="ribosome_binding_site" gene 1209053..1209808 /locus_tag="lmo1181" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986116" CDS 1209053..1209808 /locus_tag="lmo1181" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cobalamin adenosyl transferase" /protein_id="NP_464706.1" /db_xref="GeneID:986116" /translation="MAILTEDELRKAYLHTDLKTTKKLDIKKGTIITPSAKSFLSEKK IDLHYIDEIAETKVVLEPVKTETTRAKFQTIYGGALDEKPEHMTHLRGNLLVFKDHPQ IAFRGKLDTLEAEILETQCSVAAEFKDLAEDLQEILTFVRNIVRAEVLNEQIESVNLL GMDEKELRERSHNPKKYYQMTHFMPDYTMGNAVIRLNKIRTMVRETELAAFLAFKEAD YSIKRPDIIQALNRLSSLFWILMFRVRTGEYKK" misc_feature 1209053..1209805 /locus_tag="lmo1181" /note="Ethanolamine utilization protein EutT, cobalamin adenosyltransferase [Amino acid transport and metabolism]; Region: EutT; COG4812" /db_xref="CDD:443840" regulatory 1209808..1209813 /regulatory_class="ribosome_binding_site" gene 1209821..1210462 /locus_tag="lmo1182" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986114" CDS 1209821..1210462 /locus_tag="lmo1182" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PduL protein" /protein_id="NP_464707.1" /db_xref="GeneID:986114" /translation="MNNELITSLIEEVTRRALLETGVEVEASGRHVHLDRETVDALFG PGYELTHFRDLSQPGQYVCKERISIVGPKSVIHNVVILGPIRKKTQVEISSTDGTALG IKAPVRESGDIAGTPGILLLSAKNSVQLSEGLIVAKRHIHMTPADAEKQQVSQSEIVQ VKINGDRPLIFDDVVVRISPDFATYMHIDYDEANACGFKKGIRGQIIKKTKAK" misc_feature 1209836..1210444 /locus_tag="lmo1182" /note="Propanediol utilization protein [Secondary metabolites biosynthesis, transport and catabolism]; Region: PduL; cl46187" /db_xref="CDD:480527" gene 1210459..1211031 /locus_tag="lmo1183" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986117" CDS 1210459..1211031 /locus_tag="lmo1183" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1183" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464708.1" /db_xref="GeneID:986117" /translation="MSMELDALIKAVTEEVMRRLQLPEKKMIIMGQDSEHTLRQCYLK EYQVSLYDRSERACDILLLEELDIAELARISLFAPMNKKEQFITDHLLAGRPTWIMKS GIKAHAYKRSAKYGIRQLFQEYEEKLSRFGVEFIESPVKETKESKVITEQDVEKLTKN KSEFILPKGSFLTPLAKDYLQENRISIKES" misc_feature 1210471..1211028 /locus_tag="lmo1183" /note="ethanolamine utilization protein; Region: eut_hyp; TIGR02536" /db_xref="CDD:274184" regulatory 1211034..1211039 /regulatory_class="ribosome_binding_site" gene 1211046..1211315 /locus_tag="lmo1184" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986113" CDS 1211046..1211315 /locus_tag="lmo1184" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carbon dioxide concentrating mechanism protein" /protein_id="NP_464709.1" /db_xref="GeneID:986113" /translation="MQIGKVTGSLWATRKDEKLNGLKLLLVEICTDETEDVRHSIVAA DNAGAGNGDLVLVTTGSAARASTGDNTIPVDACIVGIIDSVERYG" misc_feature 1211046..1211303 /locus_tag="lmo1184" /note="Carboxysome shell and ethanolamine utilization microcompartment protein CcmK/EutM [Secondary metabolites biosynthesis, transport and catabolism, Energy production and conversion]; Region: CcmL; COG4576" /db_xref="CDD:443633" regulatory 1211297..1211302 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1184" gene 1211308..1211853 /locus_tag="lmo1185" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986110" CDS 1211308..1211853 /locus_tag="lmo1185" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PduT protein" /protein_id="NP_464710.1" /db_xref="GeneID:986110" /translation="MAEQSLGILELRSISKGYEMADVFLKAGNVTLFTFRPTCPGKFL IILQGASGELTSAMQDAKEEAGKFHVSSYILHMAHEELLAFLNNKHPKVEVDAVGIIE ISQLGAGLNAVNEALKKSAIHLKRMTLGASIGGKFVAVFTGEVSAIQEGMRILIETAE PKKVIHHTVIPSPDELLKRYL" misc_feature 1211311..1211850 /locus_tag="lmo1185" /note="PduT-like ethanolamine utilization protein; Region: eut_PduT; TIGR02526" /db_xref="CDD:131578" regulatory 1211856..1211861 /regulatory_class="ribosome_binding_site" gene 1211869..1212990 /locus_tag="lmo1186" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986111" CDS 1211869..1212990 /locus_tag="lmo1186" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ethanolamine utilization protein EutH" /protein_id="NP_464711.1" /db_xref="GeneID:986111" /translation="MSINEIIIYLMVIFMILGAIDKIIGNKFGLGAQFEEGIMAMGSL TLAMVGIITLAPVLAKILSPIVVPIYTALGADPAMFATTLLANDMGGFALAQELALTP DAGLFAGAILGSMMGPTIVFTIPVALGIIKKEDHKYLATGVLSGIITIPIGCLIGGLV AGFSPIMIFKNLVPIILVAALIMLGLWFKPEGMIKGFTIFGKGVVIVATIGLVAGAIQ QLTGLTIIPGIAPIGEGIEIVGGIALVLAGAFCLVFVITKVFNKPLMKMGKLLGMNEV AAAGMVATLANSIPMFQMLKDMDERGKIINVAFAVSAAFVLGDHLGFTAGVAQDMIFP MIVGKLVGGVTAVAVGIYMANRMMKKNKAKEQTAVKDNG" misc_feature 1211869..1212966 /locus_tag="lmo1186" /note="Ethanolamine transporter EutH, required for ethanolamine utilization at low pH [Amino acid transport and metabolism]; Region: EutH; COG3192" /db_xref="CDD:442425" regulatory 1212969..1212975 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1186" gene 1212983..1213426 /locus_tag="lmo1187" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986106" CDS 1212983..1213426 /locus_tag="lmo1187" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ethanolamine utilization protein EutQ" /protein_id="NP_464712.1" /db_xref="GeneID:986106" /translation="MADISKELIEQLVKQVVLEKMGQSSKHVDPSGILSVKLPVVKVS EEDRLDTGNPSDVVYTKDLVTLEESKRLGFGLMEMKDTTFDWFLDYDEVDYVIEGRLD VVIDGRTVSAGPGEIIFIPKGSQIKFSVTGEARFIYVTYPADWQS" misc_feature 1212992..1213423 /locus_tag="lmo1187" /note="Ethanolamine utilization protein EutQ; Region: EutQ; pfam06249" /db_xref="CDD:114941" misc_feature order(1213202..1213204,1213253..1213255,1213259..1213261, 1213265..1213267,1213271..1213273,1213295..1213297, 1213304..1213306,1213310..1213318,1213325..1213339, 1213343..1213345,1213391..1213393,1213397..1213399, 1213403..1213405) /locus_tag="lmo1187" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:380357" regulatory 1213437..1213489 /regulatory_class="terminator" regulatory 1213621..1213626 /regulatory_class="ribosome_binding_site" gene 1213636..1215087 /locus_tag="lmo1188" /db_xref="GeneID:986112" CDS 1213636..1215087 /locus_tag="lmo1188" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1188" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464713.1" /db_xref="GeneID:986112" /translation="MLTKIATYGCCATRDLFNKAFVSDWKNHFQLVSYQQHCSIVSLM SKPIDIELGEELLGELSNFEKSVFKQDVLKSFLETLKTTQPEYLVLDFHVDTFNGFIE LTDGGIITNRIVRYKKLDIFNKMEARKVFSPLENTTEFRKRWIQSFNRFMQFMKENCP NTQIIINRLEVARMYYSLDNQMESMIERRKTKDHHTAETLAKIDECIDYFERYAMNNF DLQSLDFNSEEYFGAENNPWGTCYMHYNPYYYKKKFKDLWNIVENHFHAPTKLASFAP GGLAKQIPLGVTKLSDMDEVGVYYLTNATYLQMEDRPTTDNAGYFFIVYPRNGKNGYM QELRKSTAAFSIQIFVRITDGKESSKWNMVNSGFRTLTIPDVTSISEITEAGEYYITA EQVKKLQDHPTKKNGWFLTVSKKNHDSLKQLLTKNTQNDNAFEEYVRLVNVEKRTNLK WRKYHFDEANFSIIVAIRNFKNKVVRRLKLTKA" misc_feature 1213657..1214370 /locus_tag="lmo1188" /note="Family of unknown function (DUF6270); Region: DUF6270; pfam19786" /db_xref="CDD:466185" misc_feature 1214467..>1214994 /locus_tag="lmo1188" /note="hypothetical protein; Region: PHA01818" /db_xref="CDD:107088" regulatory complement(1215085..1215122) /regulatory_class="terminator" regulatory 1215096..1215133 /regulatory_class="terminator" gene complement(1215128..1215679) /locus_tag="lmo1189" /db_xref="GeneID:986109" CDS complement(1215128..1215679) /locus_tag="lmo1189" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464714.1" /db_xref="GeneID:986109" /translation="MEKEKVVNIQPLMDSQVESQFTQQIQEDFNKKNPDHSALLHSLE TVEVLDVLSDYYTAHEKQKQPPKETTSPSKSNGEHKEIKQAIRYIKKNIHRSITLEEV ANHVYLSPFYLSKLFKNELNINFINYVNEQKMLYAKEQLEKSDWAVHTIAKNLGFSRA SYFCKVFKKEFKMTPKEYRDSLK" misc_feature complement(1215143..>1215655) /locus_tag="lmo1189" /note="transcriptional regulator MelR; Region: PRK10371" /db_xref="CDD:182416" misc_feature complement(1215143..1215391) /locus_tag="lmo1189" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" regulatory complement(1215688..1215693) /regulatory_class="ribosome_binding_site" regulatory 1215977..1215982 /regulatory_class="ribosome_binding_site" gene 1215993..1216487 /locus_tag="lmo1190" /db_xref="GeneID:986103" CDS 1215993..1216487 /locus_tag="lmo1190" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1190" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464715.1" /db_xref="GeneID:986103" /translation="MKIQKLVLCAMLIAMCVIGANIKLMGSVAFDAAPAFIGTLLLGP MYGAVLGIFGHLTSALLAGFPLTLPIHLIVAGMMGVTMIAYGFTRQKLAEKNQLVAIS VSSIVAFVFNCPLSLLALYPLMHQAVFVLFPVLAIGSVCNIFVAEVVYQVLPERWKRR IAGY" misc_feature 1216002..1216451 /locus_tag="lmo1190" /note="ECF transporter, substrate-specific component; Region: ECF_trnsprt; pfam12822" /db_xref="CDD:432808" gene 1216820..1218178 /gene="cbiA" /locus_tag="lmo1191" /db_xref="GeneID:986099" CDS 1216820..1218178 /gene="cbiA" /locus_tag="lmo1191" /experiment="EXISTENCE:[PMID:19448609]" /note="responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid" /codon_start=1 /transl_table=11 /product="cobyrinic acid a,c-diamide synthase" /protein_id="NP_464716.1" /db_xref="GeneID:986099" /translation="MNKILIAAASSGTGKTTVTLGIMHALKKRGLRVQPFKVGPDYID TNYHQAITGVASINLDSFLIDDDAMLAALFEKHGQSADISVIEGVMGLFDGLGIDRDN SSTSFIAKCTKTPVILVVDGKAISTSAAAIVDGFNRFDPELTIAGVIINRVASENHFS LIKGAIERYTDVPVLGYLPKNAAVALPERHLGLVPKEEMTELETKWEVLGDLIAEHVD LDRLLAISKTGAKLTVHPPEIQVPDFSGMRVAYALDAAFHFYYQDNLDFIRSTGATLI PFSPLEEREVPDADFIYIGGGFPEVFAERLAKNKSMHESILAAHEQGKPIYAECGGLM YLGSSLEMEAESYEMVGVFDGVSKMTTRLRKFGYCIAEPLEDTLLGKKGTAIRGHEFH HSVFETTEPTRMKLTKKRDGETVKEWHGGYQKGNTFASYLHIHFYQNLAMITHMFGAI ER" misc_feature 1216820..1218175 /gene="cbiA" /locus_tag="lmo1191" /note="cobyrinate a,c-diamide synthase; Region: PRK01077" /db_xref="CDD:234896" regulatory 1218160..1218165 /regulatory_class="ribosome_binding_site" /gene="cbiA" /locus_tag="lmo1191" gene 1218175..1219122 /gene="cobD" /locus_tag="lmo1192" /db_xref="GeneID:986098" CDS 1218175..1219122 /gene="cobD" /locus_tag="lmo1192" /experiment="EXISTENCE:[PMID:19448609]" /note="CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis protein" /protein_id="NP_464717.1" /db_xref="GeneID:986098" /translation="MILLFYTSSFILDCLLGDPYSWPHPIKAIGNLIKWLTIILRKIF HGKSLYFAGGLLFVLTVGMTGAVSWFILFLSAKIAYWLYVAVFVYLGYTTLAMTCLAK EARKIQRTLADGDLAAARVQVGMIVGRDTDKLTAEEISKATIETVAENTADGVIAPLF YLFIGGPVLALMYKAVNTLDSMVGYKNEKYRAIGFVSAKMDDIANFIPARLAWFFLVI ASFILRYDGRASWQIGLRDRKNHTSPNCAYPEGAVAGALGITLGGTHEYFGETVVKPT IGSGTKPVSEKEISQTIHLLYMASTIAFIMFASIYLLLF" misc_feature 1218175..1219116 /gene="cobD" /locus_tag="lmo1192" /note="cobalamin biosynthesis protein; Region: cobD; PRK01209" /db_xref="CDD:234919" regulatory 1219123..1219128 /regulatory_class="ribosome_binding_site" gene 1219135..1219767 /gene="cbiC" /locus_tag="lmo1193" /db_xref="GeneID:986096" CDS 1219135..1219767 /gene="cbiC" /locus_tag="lmo1193" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin" /codon_start=1 /transl_table=11 /product="cobalt-precorrin-8X methylmutase" /protein_id="NP_464718.1" /db_xref="GeneID:986096" /translation="MNYIKNPAKIEEKSFEIIQQIIDDIRPDYTFQNKLEEAIIKRAI HTTADFDYLDSLVFQQDAIAKIIHVLQNKGTIFTDTNMALSGINKRLLDELGCKYHCY VSDPETMEIAKQHGITRSMAGIKLASLKDGPKLFVLGNAPTAVYKIIEMVESGQLQAD AVVAVPVGFVGAAECKEEILETDIPAIVARGRKGGSNLAAAIINAILITM" misc_feature 1219135..1219722 /gene="cbiC" /locus_tag="lmo1193" /note="cobalt-precorrin-8 methylmutase; Region: cbiC; PRK08286" /db_xref="CDD:181353" regulatory 1219768..1219773 /regulatory_class="ribosome_binding_site" gene 1219783..1220904 /gene="cbiD" /locus_tag="lmo1194" /db_xref="GeneID:986097" CDS 1219783..1220904 /gene="cbiD" /locus_tag="lmo1194" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A" /codon_start=1 /transl_table=11 /product="cobalt-precorrin-6A synthase" /protein_id="NP_464719.1" /db_xref="GeneID:986097" /translation="MEDFIYYNGKKYRKGYTTGTCAAAAAKACVEMILTQEEVSAVQV TTTGGTILEIPVAYQKFSKDKATAAVQKDGGDDIDATHGMWIFVDIDLTDNAEVVLDG GVGIGRATQKGISVAVGEAAINPAPRKNILATVRESLGENRGAKILVYAPEGEERAKR TMNSNLGIIGGISILGTTGIVTPMSDEGWKKSLSMELEMKRNQGLDQIILVPGNYGDD FVQNTLGFSSGNIVSMSNFVGYMLKETQRLAFKKVLMVGHFGKLVKVSAGIFTTYSKD ADARAEILVANLALLGAPLSLLQAVEKCNTTEAAGELIEEAGFTQVYEVIAQKIKARS ERFLKFTKPSVEIDVVTFSTERGLLAATKDIDVLREEWR" misc_feature 1219786..1220880 /gene="cbiD" /locus_tag="lmo1194" /note="Cobalamin biosynthesis protein CbiD (cobalt-precorrin-5B C-methyltransferase) [Coenzyme transport and metabolism]; Region: CbiD; COG1903" /db_xref="CDD:441507" regulatory 1220888..1220893 /regulatory_class="ribosome_binding_site" /gene="cbiD" /locus_tag="lmo1194" gene 1220901..1221497 /gene="cbiE" /locus_tag="lmo1195" /db_xref="GeneID:986100" CDS 1220901..1221497 /gene="cbiE" /locus_tag="lmo1195" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a" /codon_start=1 /transl_table=11 /product="cobalt-precorrin-6Y C(5)-methyltransferase" /protein_id="NP_464720.1" /db_xref="GeneID:986100" /translation="MITVVGIGPGDTNLLINEARQALNSADIVYGSTRQLQEIAELTN AVPMLLPKKLADLKNIPHQSKNVVILASGDPLLYGIGNWAMANFSEDIRIIPGISAIQ MMFHQIKLPMNNCFITSSHGKMPNFDFLLQHEKVAMVTDTIIGPYEIAAEILQRDLKK ILFVGENLSSKEERIHRLKPEEVAKKYDMNVVVIVDER" misc_feature 1220901..1221494 /gene="cbiE" /locus_tag="lmo1195" /note="cobalt-precorrin-7 (C(5))-methyltransferase; Region: PRK05787" /db_xref="CDD:235609" misc_feature order(1220925..1220927,1221057..1221059,1221114..1221122, 1221129..1221137,1221195..1221200,1221210..1221212, 1221255..1221257,1221312..1221317,1221393..1221404, 1221462..1221473) /gene="cbiE" /locus_tag="lmo1195" /note="putative active site [active]" /db_xref="CDD:381171" misc_feature order(1220925..1220927,1220943..1220954,1220958..1220963, 1221120..1221137,1221144..1221149,1221153..1221158, 1221174..1221209,1221213..1221218,1221243..1221257) /gene="cbiE" /locus_tag="lmo1195" /note="putative homodimer interface [polypeptide binding]; other site" /db_xref="CDD:381171" misc_feature order(1221000..1221002,1221114..1221122,1221129..1221134, 1221195..1221200,1221315..1221320,1221393..1221395, 1221399..1221404,1221462..1221473) /gene="cbiE" /locus_tag="lmo1195" /note="SAM binding site [chemical binding]; other site" /db_xref="CDD:381171" gene 1221487..1222056 /locus_tag="lmo1196" /db_xref="GeneID:986101" CDS 1221487..1222056 /locus_tag="lmo1196" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W; decarboxylating" /codon_start=1 /transl_table=11 /product="cobalt-precorrin-6Y C(15)-methyltransferase" /protein_id="NP_464721.1" /db_xref="GeneID:986101" /translation="MKDEVFIRGKVPMTKAEVRAVSIDLLSLDEKSKKLLDVGAGTGS VGLQVACNFPKIHVTAIERNPDAVDLIKQNQAKFGLENIAVIEAYAPIELPEKETFDA IFIGGSGGNLTDIIDWSLAHLIPGGRLVLNFILLENALTAMNHLEKLTVSELTMKQIQ VSSWHKLGAGHYFEPQNPTVIIGCKKLEE" misc_feature 1221487..1222053 /locus_tag="lmo1196" /note="decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase; Region: PRK08287" /db_xref="CDD:181354" misc_feature order(1221598..1221618,1221670..1221675,1221748..1221750, 1221751..1221753) /locus_tag="lmo1196" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" regulatory 1222049..1222054 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1196" gene 1222062..1222811 /gene="cbiF" /locus_tag="lmo1197" /db_xref="GeneID:986091" CDS 1222062..1222811 /gene="cbiF" /locus_tag="lmo1197" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="precorrin-3 methylase" /protein_id="NP_464722.1" /db_xref="GeneID:986091" /translation="MAEVHFVGAGPGDKELITLKGYQLLKEADVVIYAGSLVNPELLE YCKASCEIHNSASMNLIEIIDCMEAGVTAGKEVVRLQTGDFSIYGSIREQVEEMKKRS IPFTCTPGVSSFLGAASSFGVEYTVPEVSQSVIITRMAGRTPVPSRESLRSYAAHQTS MVIFLSVQGIRKVVSELIKGGYKPETPAAVIYKATWAEEKKVTGTLEDIAEKVTEAGI TKTALIMVGDFLGEEFYYSKLYDKDFKHEYR" misc_feature 1222062..1222808 /gene="cbiF" /locus_tag="lmo1197" /note="cobalt-precorrin-4 methyltransferase; Region: cbiF; PRK15473" /db_xref="CDD:185370" misc_feature order(1222092..1222094,1222170..1222172,1222305..1222313, 1222320..1222325,1222395..1222400,1222548..1222556, 1222632..1222634,1222638..1222643,1222647..1222649, 1222719..1222730) /gene="cbiF" /locus_tag="lmo1197" /note="SAM binding site [chemical binding]; other site" /db_xref="CDD:381168" misc_feature order(1222092..1222094,1222248..1222250,1222305..1222313, 1222320..1222328,1222395..1222400,1222410..1222412, 1222473..1222475,1222548..1222553,1222632..1222643, 1222722..1222730) /gene="cbiF" /locus_tag="lmo1197" /note="putative active site [active]" /db_xref="CDD:381168" misc_feature order(1222098..1222100,1222104..1222121,1222125..1222127, 1222239..1222241,1222311..1222340,1222344..1222349, 1222356..1222358,1222380..1222382,1222386..1222397, 1222401..1222406,1222413..1222418,1222425..1222427, 1222431..1222439,1222449..1222475,1222503..1222508, 1222518..1222523,1222527..1222532) /gene="cbiF" /locus_tag="lmo1197" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:381168" regulatory 1222786..1222791 /regulatory_class="ribosome_binding_site" /gene="cbiF" /locus_tag="lmo1197" gene 1222798..1223829 /gene="cbiG" /locus_tag="lmo1198" /db_xref="GeneID:986089" CDS 1222798..1223829 /gene="cbiG" /locus_tag="lmo1198" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis protein CbiG" /protein_id="NP_464723.1" /db_xref="GeneID:986089" /translation="MSTDKLAIIAVTERGRDLAITLTKTVAATIFVPEKHCTEQTNSL TPDFGTAMREIFTKYQALICIMATGIAVRTLAPVIEDKLSDPAVLVMDEHGKFIISLL SGHVGGANELTERIATITGGAAVITTATDRANVAAIDNIAKQLNGYLPDFKATTKRIN GLLAAGKEVGLYIDEPLEIDTRGFTMEEVSPQVYISTKYKLQVATHERIQLVPKQFIL GVGCRKGVSAETIDAAFTHFCEQENIHPRAFREIHSITLKAEEPAILHLAEKWHVPFI VHPAEELQTVAGKYPTSAFVQKTVQVGNVALSSADIGSNGNVVTSRFAENGVTFAAGK LTKNSEVAK" misc_feature 1222798..1223805 /gene="cbiG" /locus_tag="lmo1198" /note="cobalt-precorrin 5A hydrolase; Region: PRK05788" /db_xref="CDD:235610" regulatory 1223813..1223818 /regulatory_class="ribosome_binding_site" /gene="cbiG" /locus_tag="lmo1198" gene 1223826..1224551 /gene="cbiH" /locus_tag="lmo1199" /db_xref="GeneID:986093" CDS 1223826..1224551 /gene="cbiH" /locus_tag="lmo1199" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine" /codon_start=1 /transl_table=11 /product="precorrin-3B C17-methyltransferase" /protein_id="NP_464724.1" /db_xref="GeneID:986093" /translation="MIYVIGIGPGDKRLMTGEALQAIEDAEVIVGYVTYIKLIKELIK DKEVVKTGMRREIDRCQEAVDIALTGKKVAVVSSGDAGIYGMAGLVLELAEKSNPDLE VKVIPGITASIGAAAVLGAPIMHDFCHISLSDLMTPWEVIEKRLTHAAMADFVVCFYN PRSKGRANHLANAFQKMMEHKSGDTVVGIVKDVGRKEERKIITTMQGIDYELVDMTTV VIVGNKETYVKNGKMITPRGYSL" misc_feature 1223829..1224542 /gene="cbiH" /locus_tag="lmo1199" /note="Precorrin-3B methylase [Coenzyme transport and metabolism]; Region: CobJ; COG1010" /db_xref="CDD:440634" regulatory 1224533..1224538 /regulatory_class="ribosome_binding_site" /gene="cbiH" /locus_tag="lmo1199" gene 1224548..1225300 /locus_tag="lmo1200" /db_xref="GeneID:986085" CDS 1224548..1225300 /locus_tag="lmo1200" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis protein CbiJ" /protein_id="NP_464725.1" /db_xref="GeneID:986085" /translation="MIFVLGGTSDSLLISDWLTETKQAFILSVATDYGETLAKQHAEN VFCGRLSKEEMLLKWNAENVHLVIDATHPFATIVSETAMEACKEADIPYIRFERTSEQ TDNTYLVADIEEACAVAMKLGKRIFLTTGSKNLPEFVDGLKSRHIIARILPVSDVIRS AEELGLVADQIIGMKGPFTKDANRTQLEMTGADVLITKESGKQGGFQEKLTAAAELNI PVIVIRRKKLNYPIEINHLTELPEILSQLEVY" misc_feature 1224548..1225285 /locus_tag="lmo1200" /note="Precorrin-6x reductase [Coenzyme transport and metabolism]; Region: CobK; COG2099" /db_xref="CDD:441702" regulatory 1225287..1225292 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1200" gene 1225300..1226781 /locus_tag="lmo1201" /db_xref="GeneID:986081" CDS 1225300..1226781 /locus_tag="lmo1201" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase" /protein_id="NP_464726.1" /db_xref="GeneID:986081" /translation="MGKVMLIGAGPGDAQLLTVKGLAALQKADVIVYDRLVEPAMLQE RKASCKLIYVGKEPLHHPIPQDEIERILVREAATNELVVRLKAGDPYVFGRGGEEGET LHKAGIPFEVIPGITSAIGGLAYAGIPVTHRDFASSFHVITGHLKKGRDPLDWEALAR LEGTLVFLMGMTNLPNICANLLEHGQKPETGVAIVQWATRGKQLTVTGNLQTIEQKVA ESGISSPALIVVGDVVSLRPQLNFFEEMPLFHTKVLLPRARAGKSMLAEQIRDLGGEV TMYPNIQVLDVAPTKTKEQLSEVSELLFTSKEAVERFFDYLAKLDLDIRSLKNSHLTA IGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQKNVSNLIIGSVVDTTEVNVILA DVKAIEMMPLYDMRPVTERPFDLESFEQVCFSSSRSVQNLLDVLTIEEKAILQTKTIL SIGRFTSATLASFGMNNFIEAESATPESLIELIQKTKLEGVPQ" misc_feature 1225300..1226034 /locus_tag="lmo1201" /note="Uroporphyrinogen-III methylase (siroheme synthase) [Coenzyme transport and metabolism]; Region: CysG; COG0007" /db_xref="CDD:439778" misc_feature 1226056..1226748 /locus_tag="lmo1201" /note="Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in...; Region: HemD; cd06578" /db_xref="CDD:119440" misc_feature order(1226068..1226070,1226215..1226223,1226311..1226313, 1226437..1226439,1226506..1226508,1226512..1226514, 1226569..1226583) /locus_tag="lmo1201" /note="active site" /db_xref="CDD:119440" regulatory 1226763..1226768 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1201" gene 1226778..1227563 /gene="cbiK" /locus_tag="lmo1202" /db_xref="GeneID:986086" CDS 1226778..1227563 /gene="cbiK" /locus_tag="lmo1202" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cobalt chelatase" /protein_id="NP_464727.1" /db_xref="GeneID:986086" /translation="MKKAILVVSFGTSYPETREKTIEACEKRVAHEFPDYTVFRAFTS NKIIKKLKTRDNMHINTPSQALNQLKELGYKEVIIQSLHIISGGEFEKITAQVEKFKP DFDSIIVSQPLLDSMEDYEKAIEAIRHQMPPLKEQEALILMGHGSKHHAFSAYACLDH MLLNEPIYLCAVESYPGLDQVIERLQQADIKKAHLMPFMLVAGDHATNDMASDEENSW KSTLEQAGIQTECHLQGLGENPLIQSQFIDHIHTAIERVKTRG" misc_feature 1226778..1227545 /gene="cbiK" /locus_tag="lmo1202" /note="Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme transport and metabolism]; Region: CbiK; COG4822" /db_xref="CDD:443850" regulatory 1227541..1227546 /regulatory_class="ribosome_binding_site" /gene="cbiK" /locus_tag="lmo1202" gene 1227556..1228266 /gene="cbiL" /locus_tag="lmo1203" /db_xref="GeneID:986075" CDS 1227556..1228266 /gene="cbiL" /locus_tag="lmo1203" /EC_number="2.1.1.130" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of precorrin-3A from precorrin-2" /codon_start=1 /transl_table=11 /product="cobalt-precorrin-2 C(20)-methyltransferase" /protein_id="NP_464728.1" /db_xref="GeneID:986075" /translation="MAKFYGIGTGPGDSKLVTMEAAERLGDVAILYTPQPKKGGESLA KKIVSPYLKDTLIIKERHFPMSYNKEEKMLAWKEIAEEIKADVQNGHDVGFITLGDPM VYSTYSYLLELLKGDIETVTLAGISSFSNIASKIELPLVMDEESFAVIPVTAGAEKIE QALTLFDTVVLMKAASNIPLLTTLLKKLNLLDAAVVVSDVAMATEKITYSMRDINPEE KMSYFTTIIVKKRREQYK" misc_feature 1227556..1228254 /gene="cbiL" /locus_tag="lmo1203" /note="cobalt-factor II C(20)-methyltransferase; Region: PRK05576" /db_xref="CDD:235512" misc_feature order(1227586..1227588,1227790..1227792,1227847..1227855, 1227862..1227870,1227934..1227939,1227949..1227951, 1228006..1228008,1228066..1228071,1228144..1228155, 1228222..1228230) /gene="cbiL" /locus_tag="lmo1203" /note="putative active site [active]" /db_xref="CDD:381172" misc_feature order(1227586..1227588,1227847..1227855,1227862..1227870, 1227934..1227939,1227949..1227951,1228069..1228074, 1228144..1228146,1228150..1228155,1228219..1228230) /gene="cbiL" /locus_tag="lmo1203" /note="SAM binding site [chemical binding]; other site" /db_xref="CDD:381172" misc_feature order(1227595..1227615,1227619..1227621,1227853..1227867, 1227877..1227882,1227886..1227888,1227919..1227921, 1227925..1227936,1227940..1227948,1227952..1227957, 1227964..1227975,1227988..1228008,1228027..1228029, 1228051..1228056) /gene="cbiL" /locus_tag="lmo1203" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:381172" regulatory 1228249..1228254 /regulatory_class="ribosome_binding_site" /gene="cbiL" /locus_tag="lmo1203" gene 1228347..1228997 /locus_tag="lmo1204" /db_xref="GeneID:984567" CDS 1228347..1228997 /locus_tag="lmo1204" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the ATP-dependent transport of cobalt" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis protein CbiM" /protein_id="NP_464729.2" /db_xref="GeneID:984567" /translation="MHIMEGFLPVKWAVFWLIVFIPFLVLGLIRIRKLIALDKNNKLL LALCAAFIFVLSALKIPSVTGSCSHPTGVGLATVMFGPLVVSVLGVIVLLFQALLLAH GGITTLGANAMSMAVIGPMVGFVVYKLARKLNCNRSVSIFLCAMTADLATYLTTSVQL GVVFPDPASGMMASILKFMAIFCVTQVPIAIAEGLLTVVMYNLISKNLPEKVAQLR" misc_feature 1228347..1228994 /locus_tag="lmo1204" /note="energy-coupling factor ABC transporter permease; Region: PRK08319" /db_xref="CDD:181384" regulatory 1228978..1228983 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1204" gene 1228994..1229290 /locus_tag="lmo1205" /db_xref="GeneID:986083" CDS 1228994..1229290 /locus_tag="lmo1205" /experiment="EXISTENCE:[PMID:19448609]" /note="periplasmic cobalt binding component of the cobalt transport system" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis protein CbiN" /protein_id="NP_464730.1" /db_xref="GeneID:986083" /translation="MKKININVILILLVVLLMVSPFFFNKTGEYGGSDGEAEAEITKI DPSYEPWFEPLYEPKSGEIESLLFTLQGCIGTGIIAYVIGVSRGKRKAENDVNH" misc_feature 1229045..1229287 /locus_tag="lmo1205" /note="ABC-type cobalt transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: CbiN; COG1930" /db_xref="CDD:441533" gene 1229277..1229954 /gene="cbiQ" /locus_tag="lmo1206" /db_xref="GeneID:986065" CDS 1229277..1229954 /gene="cbiQ" /locus_tag="lmo1206" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis protein CbiQ" /protein_id="NP_464731.1" /db_xref="GeneID:986065" /translation="MLTIDKYAYQNRWIAFSPSAKALFYVAILILALTGPVLVQAILF LCMVPLTLYVVKIHFKQYLKWLLLPFSFLLFSLLSILISISKDPSSFLASISIGSFYL GISDVTITTATQVFFRSIACLAATYFFVLTVPVVQLTKVMKRIFIPKVLIELTILIYR FIFIFLEEATAIRKAQSLRFGYHGIKNSYRSFGMLVNTLFNRVMKRYNEMVVTLDVKL YQGEFHI" misc_feature 1229277..1229951 /gene="cbiQ" /locus_tag="lmo1206" /note="energy-coupling factor ABC transporter transmembrane protein; Region: PRK15485" /db_xref="CDD:185382" misc_feature order(1229349..1229354,1229358..1229363,1229370..1229375, 1229484..1229486,1229496..1229501,1229508..1229513, 1229619..1229621,1229631..1229633,1229652..1229654, 1229661..1229666,1229679..1229681,1229724..1229726, 1229736..1229741,1229745..1229753,1229757..1229762, 1229769..1229774,1229781..1229786,1229850..1229855, 1229859..1229867,1229871..1229879,1229883..1229888, 1229892..1229897,1229907..1229909,1229916..1229921, 1229937..1229939,1229943..1229945) /gene="cbiQ" /locus_tag="lmo1206" /note="S component interface [polypeptide binding]; other site" /db_xref="CDD:410987" misc_feature order(1229733..1229735,1229745..1229747,1229754..1229759, 1229763..1229768,1229892..1229894,1229901..1229906, 1229910..1229927,1229934..1229942) /gene="cbiQ" /locus_tag="lmo1206" /note="A' component interface [polypeptide binding]; other site" /db_xref="CDD:410987" misc_feature order(1229796..1229819,1229856..1229858,1229865..1229870, 1229877..1229879) /gene="cbiQ" /locus_tag="lmo1206" /note="A component interface [polypeptide binding]; other site" /db_xref="CDD:410987" regulatory 1229953..1229958 /regulatory_class="ribosome_binding_site" gene 1229967..1230773 /locus_tag="lmo1207" /db_xref="GeneID:986074" CDS 1229967..1230773 /locus_tag="lmo1207" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cobalt transporter ATP-binding protein CbiO" /protein_id="NP_464732.1" /db_xref="GeneID:986074" /translation="MLKTEHISFQYEDGKQALTDVSIDLEKGNIIGLIGANGSGKSTL FMQLLGINKPSDGTVYFEGKPLAYTKKALFALRKKVSIVFQDPDQQIFYSNVRDDVAF ALRNLGVSESEVEARVTKVLDIVGAKDFQHKPVQYLSYGQKKRVAIAGALVLDTDWLL LDEPTAGLDPIGKKIMMEIIERLASQGKKILISSHDIDLIYEICDYVYMLKDGSVLTD GETSSVFLEKSNIELAGLVQPWLIKLHQQAGYPLFKKEADFFAHTGKVTN" misc_feature 1229967..1230746 /locus_tag="lmo1207" /note="energy-coupling factor ABC transporter ATP-binding protein; Region: cbiO; PRK13638" /db_xref="CDD:184198" regulatory 1230757..1230762 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1207" gene 1230773..1232308 /gene="cbiP" /locus_tag="lmo1208" /db_xref="GeneID:986064" CDS 1230773..1232308 /gene="cbiP" /locus_tag="lmo1208" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation" /codon_start=1 /transl_table=11 /product="cobyric acid synthase CbiP" /protein_id="NP_464733.1" /db_xref="GeneID:986064" /translation="MVKQIMIQGTASDAGKSVLVAGLCRLFKNKGKRVVPFKSQNMSL NSFITATGDEMGRAQVFQAEAAGVFPDVRMNPVLLKPTNDRQSQVIFMGAILDNMDAV TYHDFKQTLIPKIQAVYQSLADENDIIVLEGAGSPAEINLNDRDIVNMGMAKMVDAPV VLVADIDKGGVFASIYGTIMLLNEEERARIKGVIINKFRGDVALLQPGIDMIEELTNV PVIGVIPYANLQLEEEDSVSLNGKNYAPDSNALLDIAIICLPRISNFTDFHSLEIQPE ISLRYIRNLADFGKPDLVIIPGSKNTLEDMAFLEESGLKKAIQNFAENAGKVIGICGG YQMLGQKMLDPDQVESKQLEIAGLGLLDTETIFLDQKRTTQITGVTHSGEAVEGYEIH MGETKRGESTSPFCKIKAVNGNEETHQDGAISANKNIIGTYIHGIFDNDVFLGNLFDE LLTRKNQSIYPHEIINLKEHKEQEYDKLAALLEANIQMDQLEKIMKGEKICVSTQKPA IKE" misc_feature 1230773..1232257 /gene="cbiP" /locus_tag="lmo1208" /note="Cobyric acid synthase [Coenzyme transport and metabolism]; Region: CobQ; COG1492" /db_xref="CDD:441101" regulatory 1232260..1232265 /regulatory_class="ribosome_binding_site" /gene="cbiP" /locus_tag="lmo1208" gene 1232272..1232838 /locus_tag="lmo1209" /db_xref="GeneID:986058" CDS 1232272..1232838 /locus_tag="lmo1209" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464734.1" /db_xref="GeneID:986058" /translation="MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYT ITTLGAEPEIQAELEQIQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEP PEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFA VARVVNYRAGETDIFYKNSELVFRNKKK" misc_feature 1232272..1232808 /locus_tag="lmo1209" /note="Cob(II)alamin adenosyltransferase [Coenzyme transport and metabolism]; Region: PduO; COG2096" /db_xref="CDD:441699" regulatory complement(1232835..1232872) /regulatory_class="terminator" gene complement(1232884..1233351) /locus_tag="lmo1210" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986061" CDS complement(1232884..1233351) /locus_tag="lmo1210" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464735.1" /db_xref="GeneID:986061" /translation="MTKRSSKSLLLFMAMGLVSGLLSPIQTSINSQLRLTVGSPFVAS FISFLVGTTLLTLVCLIVERRLTFQLKGVGRIPWWVFTGGALGVLFVTSNILLLPLLG SAMTVVLALCGQMIIALIIDHFGFFGVIPHPINRYRMIGVLLMLIGVFLIQRF" misc_feature complement(1232899..1233321) /locus_tag="lmo1210" /note="Putative inner membrane exporter, YdcZ; Region: DMT_YdcZ; pfam04657" /db_xref="CDD:428052" regulatory complement(1233359..1233364) /regulatory_class="ribosome_binding_site" gene complement(1233366..1233815) /locus_tag="lmo1211" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986063" CDS complement(1233366..1233815) /locus_tag="lmo1211" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464736.1" /db_xref="GeneID:986063" /translation="MIILFIVSGLLAGMVLPVQTAINTRLSTYTKSPFLASWVSFMVG TTVLLIVCLFTQKSWPISSEMIASNPWYIWVGGGTLGVIFLTANILLLPRLGSALLVM ITVCGQMIMAIIIDNFGLFQVPMHEINIERLLGVILMFGGIYLMQRF" misc_feature complement(1233381..1233806) /locus_tag="lmo1211" /note="Putative inner membrane exporter, YdcZ; Region: DMT_YdcZ; pfam04657" /db_xref="CDD:428052" regulatory complement(1233823..1233828) /regulatory_class="ribosome_binding_site" regulatory 1233891..1233896 /regulatory_class="ribosome_binding_site" gene 1233904..1234434 /locus_tag="lmo1212" /db_xref="GeneID:986143" CDS 1233904..1234434 /locus_tag="lmo1212" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464737.1" /db_xref="GeneID:986143" /translation="MKIRIIGSVGSGKTTLAKKLSEWYQIDYFETDRIVWKREGIEVR RTDIEKIAVLNKILQQENWIIEGVHLEAWVNESFDQADVIIFLNLPKKQIRSQLIKRQ IKQLLRLEAAHYQVKLNMLNKMFYWDDLFDQRTKPLIAEKMAQTPTKWLVVTEKTALQ EIQKKLLQIISSRDIL" misc_feature 1233904..>1234215 /locus_tag="lmo1212" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" regulatory 1234450..1234455 /regulatory_class="ribosome_binding_site" gene 1234465..1234776 /locus_tag="lmo1213" /db_xref="GeneID:986048" CDS 1234465..1234776 /locus_tag="lmo1213" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464738.1" /db_xref="GeneID:986048" /translation="MNEKLRKAYLPMTETAFYILLSLVKPRHGYAIIENVAKMTDDRI KLGPGTIYGSLSKMNKDNLIQIIQEESNRKIYQITEIGTDILQLEKARIEELYRNSRE V" misc_feature 1234465..1234761 /locus_tag="lmo1213" /note="DNA-binding transcriptional regulator, PadR family [Transcription]; Region: PadR; COG1695" /db_xref="CDD:441301" regulatory 1234766..1234771 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1213" gene 1234779..1235330 /locus_tag="lmo1214" /db_xref="GeneID:986223" CDS 1234779..1235330 /locus_tag="lmo1214" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1214" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464739.1" /db_xref="GeneID:986223" /translation="MEKKVVKFFTVDNMEKEEAYLNEMAQNGWFFQKYKSFKYHFEQG EPAKYSYAIDFKENEGDEEAYKTLFEDAGWETVFSYPVLNGNWMYFRKAVAPGETEEA IFTDETSLIQLYKNIRKRWTIFGAIVSLFLFVELLIVFQIENHIGIATFIFIIFFILV SLYGKMFFNLTRKINNLATRKAS" misc_feature 1234821..1235153 /locus_tag="lmo1214" /note="Protein of unknown function (DUF2812); Region: DUF2812; pfam11193" /db_xref="CDD:431715" regulatory 1235656..1235661 /regulatory_class="ribosome_binding_site" gene 1235670..1236539 /locus_tag="lmo1215" /db_xref="GeneID:986221" CDS 1235670..1236539 /locus_tag="lmo1215" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase" /protein_id="NP_464740.1" /db_xref="GeneID:986221" /translation="MKYRKLSKKKKQKRLIGIAGILLLVILVGVIASVVRQQYLIMTA PEPDPAFHSKEQNFLNELSPRAQEIQEKHGILTSITLAQAILESDWGQSGLAQKGNNL FGVKGKSPQPMVTMTTKEFVDGKWIEINANFRKYKDWNESLDSHAELFLNGTSWNKDK YNGVIAADDYKKAAQELQSAGYATDPDYAEKLINIIEKYDLALYDRIEDKIYYDTKST GFGNVKKDVSGAIWTKPYGLSGALKVEEINYYKREDLKLLREAKTDSGTWYQIAVDTE PIGWVKQELIDKK" misc_feature <1235793..1236275 /locus_tag="lmo1215" /note="Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility]; Region: FlgJ; COG1705" /db_xref="CDD:441311" misc_feature 1236294..1236515 /locus_tag="lmo1215" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" gene 1236836..1237822 /locus_tag="lmo1216" /db_xref="GeneID:986054" CDS 1236836..1237822 /locus_tag="lmo1216" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase" /protein_id="NP_464741.1" /db_xref="GeneID:986054" /translation="MTIGLGITITLFAVPIHSQAAGLEDGLTSKQEKFINEIAPHAQK VQKEHGILASITISQAILESNWGESKLAKDGNNLFGIKGSYQGASIKLPTKEHNGVVW VGTDAVFRAYPGWYESMNDHALLFVKGPSWNPHLYGGLIKEYDFEKAAIALGKTGYSS DPEYAAKLIELIKKANLNKYDTVYSERVSDKAIKATGEVAVKDNCYVWSAPGGTKGAK PVVSTTKYFGRQVSINQEVKVTDSNISWYHIHQNGESIGWIESTSIKDFYQLEDYAPT VDALLKTDDNNRLVINMDIDTSELHKTKLVKADTKEKTAFNLPLLNVQSIIW" misc_feature <1236914..1237372 /locus_tag="lmo1216" /note="Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility]; Region: FlgJ; COG1705" /db_xref="CDD:441311" misc_feature 1237400..1237636 /locus_tag="lmo1216" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" regulatory 1237919..1237924 /regulatory_class="ribosome_binding_site" gene 1237934..1239013 /locus_tag="lmo1217" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986057" CDS 1237934..1239013 /locus_tag="lmo1217" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="endo-1,4-beta-glucanase and to aminopeptidase" /protein_id="NP_464742.1" /db_xref="GeneID:986057" /translation="MDEQLKMLKALTDAKGIPGNERAVRNVFREYIEPLADSFETDGL GSAVAKKVGAEDGPKIMIAGHLDEVGFMVTQIDDKGFIKFQTVGGWVSQVMLAQKVTI VTRSGEEITGVIGSKPPHVMTAADRQKSFDIKDMFIDVGAVDKAEVESYGIRPGDMIV PAFDFTVMKNEKFLLAKAWDNRIGLAIAIEVLKNLQKEQHPNIVYGVGTVQEEVGLRG AKTAAHFVQPDIGFAVDVGIAGDTPGVTDKEAMSKMGEGPQIVIYDASMVAHAGLRDF VTDVADELSIPYQFEAIPMGGTDSGSIHLTGNGIPSLSITIATRYIHSHSSMLHRDDF ENAVKLITEVVKRLDKEKVTEIRLG" misc_feature 1237934..1238992 /locus_tag="lmo1217" /note="Putative aminopeptidase FrvX [Amino acid transport and metabolism, Carbohydrate transport and metabolism]; Region: FrvX; COG1363" /db_xref="CDD:440974" regulatory 1239024..1239029 /regulatory_class="ribosome_binding_site" gene 1239039..1239797 /locus_tag="lmo1218" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986185" CDS 1239039..1239797 /locus_tag="lmo1218" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="rRNA methylase" /protein_id="NP_464743.1" /db_xref="GeneID:986185" /translation="MEQIQSVKNDRVKTWKKLQTRKGRDKTGTYLVEGFHLVEEALRQ DGLVLELLVSSGVSVPEEWLKGDYDVFEISTEISHLISETMTEQGVFAVVATSEPDMM LLYGKKLLLVDAVQDPGNVGTLIRTADAAGYDCVVLGKGSADLYNPKVIRSTQGSHFH IPVIQADLFDWIANLEEEGVPVIGAVLDDQAKSLNDMTKRDTLALMVGNEGNGISPEL QDRLSEKVYIPIYGDSESLNVAVAAGILLYGLRK" misc_feature 1239048..1239782 /locus_tag="lmo1218" /note="tRNA G18 (ribose-2'-O)-methylase SpoU [Translation, ribosomal structure and biogenesis]; Region: SpoU; COG0566" /db_xref="CDD:440332" regulatory complement(1239794..1239837) /regulatory_class="terminator" regulatory 1239805..1239848 /regulatory_class="terminator" gene complement(1239842..1240201) /locus_tag="lmo1219" /db_xref="GeneID:986049" CDS complement(1239842..1240201) /locus_tag="lmo1219" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1219" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464744.1" /db_xref="GeneID:986049" /translation="MPSIRYIVKTDVAETFEIIKAGQVGSNIVFSEVRTFDFGELATL ACEKFYFRSSNRAALFVTINNFHGETEVTIISTGSSNGFFTGIDWGAAFDYMHSVVAD LKRVAIREVAIEKQEEI" misc_feature complement(1239929..>1240129) /locus_tag="lmo1219" /note="Family of unknown function (DUF6054); Region: DUF6054; pfam19524" /db_xref="CDD:437356" regulatory complement(1240209..1240214) /regulatory_class="ribosome_binding_site" regulatory 1240344..1240349 /regulatory_class="ribosome_binding_site" gene 1240358..1240681 /locus_tag="lmo1220" /db_xref="GeneID:986047" CDS 1240358..1240681 /locus_tag="lmo1220" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464745.1" /db_xref="GeneID:986047" /translation="MTDAHTVCPKFESAFQLLGKRWTGLIINVLLTGPKRFKQVAAEI PQMSDRVLAERLKELEEMDICLRQVYPETPVRIEYELTEKGKALQEVMLEVQCWADKW VEVPN" misc_feature 1240370..1240669 /locus_tag="lmo1220" /note="DNA-binding transcriptional regulator, HxlR family [Transcription]; Region: HxlR; COG1733" /db_xref="CDD:441339" regulatory 1240690..1240729 /regulatory_class="terminator" gene 1240774..1241002 /locus_tag="lmos44" /db_xref="GeneID:18245195" misc_RNA 1240774..1241002 /locus_tag="lmos44" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245195" regulatory 1241035..1241040 /regulatory_class="ribosome_binding_site" gene 1241048..1242100 /gene="pheS" /locus_tag="lmo1221" /db_xref="GeneID:986046" CDS 1241048..1242100 /gene="pheS" /locus_tag="lmo1221" /EC_number="6.1.1.20" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily" /codon_start=1 /transl_table=11 /product="phenylalanyl-tRNA synthetase subunit alpha" /protein_id="NP_464746.1" /db_xref="GeneID:986046" /translation="MLEQLQTLKSEAETQINEASDLKTLNDLRVKYLGKKGPMTEIMK QMGKLSAEERPKMGSLANEVRTALTEAISSKQQILETEAINEKLKSETIDVTLPGTAP SIGTKHLLTQVIEEMEDMFIGMGYEIAEGPEVELDYYNFEALNLPKDHPARDMQDSFY ITENTLLRTQTSPVQARTMEKHDFSKGPIKVICPGKVYRRDNDDATHSHQFTQIEGLV VGENITFADLKGTLTVLAKTMFGEEREIRLRPSFFPFTEPSVEMDISCFKCGGKGCRV CKGTGWIEILGSGMVHPNVLEMSGIDSTRYSGFAFGLGPERVAMLKYAVDDIRHLYTN DLRFTKQFQSTETGEI" misc_feature 1241051..1242073 /gene="pheS" /locus_tag="lmo1221" /note="Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis]; Region: PheS; COG0016" /db_xref="CDD:439787" gene 1242100..1244508 /gene="pheT" /locus_tag="lmo1222" /db_xref="GeneID:986682" CDS 1242100..1244508 /gene="pheT" /locus_tag="lmo1222" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily" /codon_start=1 /transl_table=11 /product="phenylalanyl-tRNA synthetase subunit beta" /protein_id="NP_464747.1" /db_xref="GeneID:986682" /translation="MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLK NVVVGEVLSCERHPDAEKLNKCLVQTDEAEPVQIICGAPNVAAGQKVIVAKVGARLPG GLKIKRAKLRGEVSEGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVNAITLLGL DDAILDMAITPNRADALSMKGVAHEVGAIIHQKPAQPTEPDVSEKGKAEDFISVEVEN PAETPYYAIKMVENIEIKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFD YDKIGSKKIVVRSAKEQEEITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVT ENTTTVALEGAIFSSSSIGKASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAEL SGGTLVGGVVEVDNREKAVNKIETSLTRINRILGTAITLTEIETIFDRLGFVLEVKND ALIIEVPTRRWDITIEADILEEVARIYGYDEIPVTLPATSTTGGLSDSQKARRVMRAY LEGAGLNQALTYSLTSKKDATRLALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASY NIARKNMDVALYEMGTVFYATEGDNLPIEQEHLAGLITGNWHIADWQKTPKPVDFFVL KGIVEGLVNKLGIKSELHWKQTEKEELHPGRTASLVLEGQEIGYLGALHPAVEANYDL KETYVFEINVAALLDATKEKVVYHPIPRYPEMTRDLALLVDKDTNHAAISQVIKEHGG KLLVDIELFDIFEGESLGENKKSLAYTLTFLDSERTLVEEDVQKATNKVVEALQEKLN AIIR" misc_feature 1242100..1244505 /gene="pheT" /locus_tag="lmo1222" /note="phenylalanyl-tRNA synthetase subunit beta; Reviewed; Region: pheT; PRK00629" /db_xref="CDD:234804" regulatory 1244517..1244568 /regulatory_class="terminator" regulatory 1244657..1244662 /regulatory_class="ribosome_binding_site" gene 1244669..1245370 /locus_tag="lmo1223" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986045" CDS 1244669..1245370 /locus_tag="lmo1223" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding proteins" /protein_id="NP_464748.1" /db_xref="GeneID:986045" /translation="MTYVEMKDVSKYYQMGENVVTANDKITFGIKKGEFVVIVGPSGA GKSTVLNILGGMDSASEGKIMVDGQDIAQYNAKQLTKYRRTDVGFVFQFYNLVPNLTA KENVELAAQIAPNALDAETVLTQVGLSHRLDNFPAQLSGGEQQRVAIARALAKAPKLL LCDEPTGALDYDTGKSVLKLLQETCRNTGTTVIVITHNTAITPIADRIIEINNAKVRS IKENPEPMSIDDLEW" misc_feature 1244678..1245322 /locus_tag="lmo1223" /note="ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]; Region: LolD; COG1136" /db_xref="CDD:440751" regulatory 1245369..1245374 /regulatory_class="ribosome_binding_site" gene 1245384..1248794 /locus_tag="lmo1224" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986043" CDS 1245384..1248794 /locus_tag="lmo1224" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464749.1" /db_xref="GeneID:986043" /translation="MKRSALWKDIYREIWRSKSRFISIFMLIMLGVAFFSGLKATGPD MLLTADNYFNKYELANFNVQSTYGLDETDKEALEDISGVAQVELGYTADTLMKDKNIV TKLFSTSKSDNLNQYKVISGRLPEKSGEIALDNNQLVHKNVKIGDKVTFVKSDGNKLT DTLKKSTYKVVGFVSSPAYIQKSERGSSTVGKGKTDAFGVIPEQDFNLPEYTIANLTF DNLAAKQAFSDEYVSTEEKDKKSVEQALGDQPEKRLNKIKTSEQKKLNEATAEINKGK AELKANEAKLADAKAQLEEGFSKYNAARASYDAKIKQSEAEIANGEAELANAKKQLDA AKIQIDQGEQALIQAEMELEEGRAAWEDANNLLNTANGYLREAKSTLENVLKQPDLTD FELDRASLTDSFQMLASELDLSNADREEYENAMNNLLDDYENGNISDAEIRESINAAL AQVANAENEYQSARTALDAEKQTIEQGEKTLAAKNQELQQAKIAYQEGLTKYQDGLEK ISLAKQQLAVGKQTGSLELQSALAKLNTGQAEYDKNFALFKKEKAKAEAKLTSAEKDV QIGQQKLDALKVPKYYVLDRNDNPGYSEYKENADRLTSLSTAFPIFFFLIAALVCLTT MTRMVEEQRTQIGTLKAFGYSNGSIILKYLVYGSIASVIGSVLGILIGFQFFPNIIFN AYKSMYEMPSVDIGFYWSYSLLALFVALFCTTFTAYVACRAELRANAATLMRPKAPKI GKRIFLERISFIWKRMNFTSKVTARNLFRYKQRMLMTVLGVAGCTALILTGFGLRNSI SDIAKMQYGQIMKYDAAIYQDMSAPPAAKETFDEIMNDSNIKSKLAMSQTNIETVKSG QSAQTTSIIVPKNLNELPNYIVLRDRASHTTEKLTDDGAIITEKLAKLFDVKPGDTIT VKNAENDKFQIKVSAITENYAMHYIYMTKAYYQQVFKEKPSYNLDLLMLKDTSEKVES DFAEKLTDSKAILNVTFSNNVSSLLNETLDSLNIVIVVLITSAALLAFVVLYNLTNIN VSERIRELSTIKVLGFYPKEVTMYVYRENIILTLMGIAAGFILGFFLHRFIITTAEVD QMMFSPAISWTSYLFSGILTLVFATVVMVVMHIKLKRIDMIEALKSVE" misc_feature 1245384..1246901 /locus_tag="lmo1224" /note="Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]; Region: HEC1; COG5185" /db_xref="CDD:444066" misc_feature <1247112..1247585 /locus_tag="lmo1224" /note="ABC-type transport system involved in lipoprotein release, permease component LolC [Cell wall/membrane/envelope biogenesis]; Region: LolE; COG4591" /db_xref="CDD:443648" misc_feature 1248057..1248785 /locus_tag="lmo1224" /note="ABC-type transport system involved in lipoprotein release, permease component LolC [Cell wall/membrane/envelope biogenesis]; Region: LolE; COG4591" /db_xref="CDD:443648" regulatory 1248876..1248881 /regulatory_class="ribosome_binding_site" gene 1248892..1249344 /locus_tag="lmo1225" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986044" CDS 1248892..1249344 /locus_tag="lmo1225" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="NP_464750.1" /db_xref="GeneID:986044" /translation="MERQKVKQLIKSYQQTYIFAMNQIHQAISEISASTVDLSIEQFF VLREIATYDGISATELAATLAVNKSAITPKLKKLVEKGYIRRERNQLDKRAVVLTISE KGNNVYEECEKQLELLVNEWLEILGEKDSEQFFELFQKITKSVVEPRQ" misc_feature 1248943..1249323 /locus_tag="lmo1225" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" regulatory 1249346..1249351 /regulatory_class="ribosome_binding_site" gene 1249360..1252560 /locus_tag="lmo1226" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986040" CDS 1249360..1252560 /locus_tag="lmo1226" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_464751.1" /db_xref="GeneID:986040" /translation="MKWIMKLRWAILAFWLAAAVVLMFIAPPMADLVREKGELKLPDG YPSSLATEMQKKHNPDDKGSAYIAVYTADHKLTGTELNDIQKSLDSIEKDKDELHVTN VLSSFNQPELKDKFLAKDGKTMVASLTVDDTDASVKSIRNALDKKMDVKGVDTYLTGN KLIQEDVVQGSEDGLHKTEGITVVFILVVLFLVFRSAVAPFIPLITVGISYLVAQSTV AFLIDIFNFPVSTYTQIFMVCIMFGIGTDYCILLMSRFKEEMGAGLNPREAVHATYRT AGKTVIYSGVAVLVAFTSLYFVQFDLYRSAVAVGVGIVVLLAALYTLVPFFMSTLGTH LFWPLNKNISHKENKIWGAAGKFTFARPWIALLIVAAITLPPILLHTGTESFNSLDEI SDKYPSKKGFEIVSDSFGAGQVAPTQIFIENDDNMRTTDYIAQIEKISDDLSHLKGID MVMSASRPAGKRVDDIYIKNQAGQVNDGVGQATDGVGEVKKGLDSASSELKKSEPALD KAVAGVGDLQKGTVATQEGINQLQTALAQIQKGIESGATGAGDLKQGVAEAKSQLATL QNGEAQIQAGYAEIQKNLQNVADQLKGFENPSSQAIDTSKLEEQFKKIGASFQAFAAA HPEVRNDPRFQKLAADIQGLETAGNELKTSAGQQMAALQAKMKELNQGIQQLATAMNQ LNEQSKQISDGLSAFSTGLGQIETGLDQLEKGLNQAAVGQGQVVSKMPEVSNALTQIA AGQGALKDGFAGISGQMGQLTDGLTSGADGLGKVESGLNTANGLIDDWSKVPYASSGI YVPDALLKNADFQKVLDQYISSDGKLATINVILTKNPYSNEAMDSIDDINDQLAASMK GTKLENAKIGIGGMTSANYDTRDMSTADYHLVLVIVLASVFVTLVIVLRSLVMPIYLI ASLVLTYFAALGFAEIIFMRILGYSGLTWATPFFGFVVLVALGIDYSIFLMSRFNEYN GLSVRDRMIKAMKNMGGVIFSAVIILGGTFAAMMPAGVLSLLEIATVVLIGLVLYAVV ILPLFVPVMVKLFGRGNWWPFITRKGDHQENVPPKK" misc_feature 1249375..1252509 /locus_tag="lmo1226" /note="Transport protein; Region: actII; TIGR00833" /db_xref="CDD:129913" regulatory 1252570..1252607 /regulatory_class="terminator" regulatory 1252653..1252658 /regulatory_class="ribosome_binding_site" gene 1252667..1253341 /locus_tag="lmo1227" /db_xref="GeneID:986857" CDS 1252667..1253341 /locus_tag="lmo1227" /experiment="EXISTENCE:[PMID:19448609]" /note="Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine" /codon_start=1 /transl_table=11 /product="uracil-DNA glycosylase" /protein_id="NP_464752.1" /db_xref="GeneID:986857" /translation="MIKLGNDWDELLKNEFNQPYYLTLRQFLKKEYQTKKVFPDMYDI FNALKHTAYKDVKVVILGQDPYHGPGQAHGLSFSVQQGVQIPPSLQNIYLELHNDLNC EIPNNGYLIPWADQGVLLLNTVLTVRAGQANSHRGQGWEILTNHIIEIINQKEEPVVF LLWGSNAKEKLQLLTNPKHTAFTSVHPSPLSASRGFMGCKHFSKTNQFLEQNGVKPID WQIPSI" misc_feature 1252667..1253323 /locus_tag="lmo1227" /note="Uracil-DNA glycosylase [Replication, recombination and repair]; Region: Ung; COG0692" /db_xref="CDD:440456" regulatory complement(1253338..1253373) /regulatory_class="terminator" regulatory 1253349..1253373 /regulatory_class="terminator" gene complement(1253379..1254305) /gene="rnhC" /locus_tag="lmo1228" /db_xref="GeneID:987663" CDS complement(1253379..1254305) /gene="rnhC" /locus_tag="lmo1228" /EC_number="3.1.26.4" /experiment="EXISTENCE:[PMID:19448609]" /note="An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids" /codon_start=1 /transl_table=11 /product="ribonuclease HIII" /protein_id="NP_464753.1" /db_xref="GeneID:987663" /translation="MANTVILVDQPTLEKMKQTYLPFSNPKLPPGAVFAAKKPGVSIT GYKSRKVMFQGVNGEAEAKKWVATLPESKAKAPSVSKGILPANFASKNVIGSDEVGTG DFFGPITVCAAYVDAEMMPLLKELGVKDSKAMKDPEICRIAEKIMPLVPHSVLLCPNP KYNELQKRGMNQGQMKALLHNRAIENVLKKLAPIKPEAILIDQFAEKNTYYRYLAKEP SIIREDVFFATKAEGLHLSVAAASIIARYKFVQAFDAMSKEVGIPLPKGAGPHVDAVA AEIIERFGLETLAKYTKQHFANTEKALKMVKK" misc_feature complement(1253394..1254305) /gene="rnhC" /locus_tag="lmo1228" /note="Ribonuclease HIII [Replication, recombination and repair]; Region: RnhC; COG1039" /db_xref="CDD:440661" regulatory complement(1254313..1254319) /regulatory_class="ribosome_binding_site" regulatory 1254446..1254451 /regulatory_class="ribosome_binding_site" gene 1254459..1254722 /locus_tag="lmo1229" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985608" CDS 1254459..1254722 /locus_tag="lmo1229" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464754.1" /db_xref="GeneID:985608" /translation="MANERNKVVTTIYGREYTIVGVETTDHLRKVAREVDEKMHEIGS QNHALDSGRLAVLTAVNATHDYLKLEQKYLELEQELARIKGRD" misc_feature 1254471..1254710 /locus_tag="lmo1229" /note="cell division protein ZapA; Provisional; Region: PRK14126; cl01146" /db_xref="CDD:470096" regulatory 1254710..1254715 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1229" gene 1254722..1255264 /locus_tag="lmo1230" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986037" CDS 1254722..1255264 /locus_tag="lmo1230" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464755.1" /db_xref="GeneID:986037" /translation="MILNAIILILLVCGFFAGFRTGLIKQLILLLGYILAFFISYTYY EDLAPHLTFIPYPGSDTADGLSIILQELRTETAYYNVLGFAIIFIVAIIVVHMLASLV GGLTKIPVLRQINGLLAAVFGVIKSYLIIFVVLFIMAIYPANWSENLIDSSTVAQWML ENTPILSEQFYDWMTDILPK" misc_feature 1254755..1255258 /locus_tag="lmo1230" /note="Colicin V production accessory protein CvpA, regulator of purF expression and biofilm formation [Nucleotide transport and metabolism, Cell wall/membrane/envelope biogenesis]; Region: CvpA; COG1286" /db_xref="CDD:440897" regulatory 1255343..1255348 /regulatory_class="ribosome_binding_site" gene 1255357..1257069 /locus_tag="lmo1231" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986038" CDS 1255357..1257069 /locus_tag="lmo1231" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA polymerase beta" /protein_id="NP_464756.1" /db_xref="GeneID:986038" /translation="MATNKKEIIRLLEEIATYMELKGENSFKISAFRKAAQAIELDSR SLSEIDDFTKISGIGKTTGEIIQRYLDSGECPELEELKKEVPAGLVPLLDVPGLGGKK LSRLYHELGVVDKDTLLQEAENGHIEALKGFGKKSAEKMAEAVREMGERPDRYPLNDV LPIIQKVEAYLAEIAPIETFAQAGSLRRLRETVKDLDYVIATEKPEDVQKALLAFPLI TDVIGAGETKVSAVLEDNITISVDFRLVEKKAFATTLHHFTGSKDHNIKMRQLAKQSN EKISEYGVEQEDGTVRHFESEKTFFEHFKIPFLPPEVRRDGTEIERVTKDTKFLELSD IRGDLHMHTTWSDGAYAIPEMIEACIAKGYEYMVITDHGKFLRVANGLDEKRLLEQQA EIKKIAAKYPEIDVYSGVEMDILADGSLDFDDETLKQLDFVIASIHSSFQQSEEEIMK RLKTACENPYVRLIAHPTGRIVVKRKPYHVNMKELIQLAKSTGTALELNANPQRLDLN REHLEMAHAAGVPIAINTDAHDTKHLDFMSIGVRAATKAWLGKSAILNTKTAAEFKQF LQNK" misc_feature 1255366..1257066 /locus_tag="lmo1231" /note="DNA polymerase/3'-5' exonuclease PolX; Region: PRK08609" /db_xref="CDD:236311" regulatory 1257079..1257084 /regulatory_class="ribosome_binding_site" gene 1257092..1259449 /locus_tag="lmo1232" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986039" CDS 1257092..1259449 /locus_tag="lmo1232" /experiment="EXISTENCE:[PMID:19448609]" /note="MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange" /codon_start=1 /transl_table=11 /product="recombination and DNA strand exchange inhibitor protein" /protein_id="NP_464757.1" /db_xref="GeneID:986039" /translation="MEKKVEAILEFDKIKKQLTEFASSSLGEQAILELAPATDFQVVQ KTQLETEEGAKIIRLRGSAPITGLTDVFAHLKRLEIGGDLNGLEIYQIGSNLRVSRQM KNFMNDLLEIGVELPILGALSDELLVLKEVEEDIAISVDESGKVLDTASEALSTIRRT LRRTEDRVREKLESYLRDRNASKMLSDAVITIRNDRYVIPVKQEYKGHYGGIVHDQSA SGQTLFIEPQSVVDLNNERKALQAKEKQEIERILAEISASLAAWINEIHHNTFILGRF DFIFAKARFGKAMKAVTPHLSDAGVVHLIAARHPLLDAAKVVANDIYLGEDFTTIVIT GPNTGGKTITLKTLGLLTLMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTF SSHMTNIVSILEKVNQKSLILYDELGAGTDPQEGAALAIAILDASHEKGASVVATTHY PELKAYGYNRVHATNASVEFNVETLSPTYKLLIGVPGRSNAFDISRRLGLSENIITEA RSLVDTESADLNDMISSLEEKRNLAETEYEEARELARGADNLLKDLQKEITNYYQQKD KLIEQASEKAATIVEKAEAEAEEIIRELRTMQLNGAAGIKEHELIDAKTRLGNAKPKT INKTIPQAPKQKPHVFQEGDNVRVLSLGQKGTLLNKISDKEWNVQIGIIKMKIKTADL EYIQPEKPKKQRIITSVHSSGSPAKSELDLRGERYEDALQKVDKYLDEALLAGYPQVA IIHGKGTGALRTGVTEYLKNHRMVKSIRFGAAAEGGNGVTIVEFK" misc_feature 1257092..1259446 /locus_tag="lmo1232" /note="dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair]; Region: MutS2; COG1193" /db_xref="CDD:440806" regulatory 1259514..1259519 /regulatory_class="ribosome_binding_site" gene 1259530..1259841 /gene="trxA" /locus_tag="lmo1233" /db_xref="GeneID:986032" CDS 1259530..1259841 /gene="trxA" /locus_tag="lmo1233" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="NP_464758.1" /db_xref="GeneID:986032" /translation="MVKEITDATFEQETSEGLVLTDFWATWCGPCRMVAPVLEEIQEE RGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKY V" misc_feature 1259530..1259838 /gene="trxA" /locus_tag="lmo1233" /note="Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family [Posttranslational modification, protein turnover, chaperones]; Region: CnoX; COG3118" /db_xref="CDD:442352" regulatory 1259904..1259909 /regulatory_class="ribosome_binding_site" gene 1259917..1261728 /gene="uvrC" /locus_tag="lmo1234" /db_xref="GeneID:986033" CDS 1259917..1261728 /gene="uvrC" /locus_tag="lmo1234" /experiment="EXISTENCE:[PMID:19448609]" /note="The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit C" /protein_id="NP_464759.1" /db_xref="GeneID:986033" /translation="MSSEHIQNKLALLPDQPGCYLMKDRQGTIIYVGKAKILKNRVRS YFSGTHDSKTQRLVQEIVDFEYIVTSSNVEALLLEINLIKKHDPRFNIRLKDDKTYPF IKITNERHPRLIITRQVKKDKGKYFGPYPNVYAANEVKRILDRLYPLRKCSTLPNKVC LYYHLGQCLAPCVFDVEASKYKEMQDEIVAFLNGGYKTVKNDLMKKMQEAAENMEFEK AGEFRDQINAIETTMEKQKMTMNDFVDRDVFGYAIDKGWMCVQVFFIRQGKLIERDVS QFPFYNDADEDFLTFIGQFYQKANHIPPQEIYLPNDVDSEAVQAVVPDTKIIVPQRGN KKDLVKLAYKNAKIALNEKFMLLERNEERTVGAVERLGEAMGIPTPSRVEAFDNSNIH GTDPVSAMVTFLDGKPSKNDYRKYKIKTVEGPDDYATMREVIRRRYWRVLKEGLPMPD LILIDGGKGQIDSAKDVLTNELGLDIPVAGLAKDDKHRTSQLLFGDPLEIVPLERNSQ EFYLLQRMQDEVHRFAITFHRQLRSKTGFQSILDGIPGVGPGRKKKLLKHFGSMKKLK EASIEEIKEAGVPLNVAEEVHKHITAFNEKAKNTEQK" misc_feature 1259923..1261683 /gene="uvrC" /locus_tag="lmo1234" /note="excinuclease ABC subunit UvrC; Region: uvrC; PRK00558" /db_xref="CDD:234792" regulatory 1261747..1261777 /regulatory_class="terminator" regulatory 1261903..1261908 /regulatory_class="ribosome_binding_site" gene 1261917..1263131 /locus_tag="lmo1235" /db_xref="GeneID:986030" CDS 1261917..1263131 /locus_tag="lmo1235" /EC_number="2.7.2.4" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation." /codon_start=1 /transl_table=11 /product="aspartate kinase" /protein_id="NP_464760.1" /db_xref="GeneID:986030" /translation="MGLVVLKFGGTSVSTVDKIGKTADQAIYEKKQGNKVIVVVSAMG KSTDKLVAMAEEISEAPDKREMDMLLSTGEQITIALLAMTLKEKGHDAISYTGWQAGI ETEAVHSNARIADIDSARIESALDAGQIVVVAGFQGFTTDGEITTLGRGGSDTTAVAI ASALNAEKCAICTDVVGVFTTDPRYVKKAQKLEQITYDEMLELANLGAGVLHPRSVEY AKNFRIPLEVRASHEQVPGTMIEEDLTMENTKVVRGIAFEDQITRVTIHWKQKEAMRV SKVFTKLAENNIDVDIIIQGITGLGHGNLSFTIKTSALLATLAVLEESKELLQIEKLE SEQELAKVSIVGSGMVSNPGVAAQMFEALTENNIPIKMISTSEIKVSTVVPARKMVEA AQVLHDQFELDK" misc_feature 1261917..1263125 /locus_tag="lmo1235" /note="aspartate kinase; Reviewed; Region: PRK06635" /db_xref="CDD:235843" regulatory complement(1263124..1263181) /regulatory_class="terminator" gene complement(1263187..1263681) /locus_tag="lmo1236" /db_xref="GeneID:986036" CDS complement(1263187..1263681) /locus_tag="lmo1236" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464761.1" /db_xref="GeneID:986036" /translation="MVIMVYESGVSEMTENEQNKHEEKALVPSFGLDLLRDYLIPELL GDEAPHIMYWAGKDLARKFPLDSLEEVAEFFEEASWGNFSILKEKKDEMRLLLEGETV AARFRTQEEPTFKLEAGFIAEQLQSQKKLYTESYDEIDKRKKQVTIIVKWDRKETIDN EERY" misc_feature complement(1263229..1263594) /locus_tag="lmo1236" /note="Protein of unknown function (DUF2507); Region: DUF2507; pfam10702" /db_xref="CDD:431446" regulatory 1263816..1263821 /regulatory_class="ribosome_binding_site" gene 1263829..1264629 /gene="racE" /locus_tag="lmo1237" /db_xref="GeneID:986027" CDS 1263829..1264629 /gene="racE" /locus_tag="lmo1237" /experiment="EXISTENCE:[PMID:19448609]" /note="converts L-glutamate to D-glutamate, a component of peptidoglycan" /codon_start=1 /transl_table=11 /product="glutamate racemase" /protein_id="NP_464762.1" /db_xref="GeneID:986027" /translation="MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPR DKEEVAKFTWEMTNFLVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAA LKATRNNKIGVLGTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA KKVVAESLLPLKSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALL DYHNLLDATDEEIEHRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLGK" misc_feature 1263829..1264596 /gene="racE" /locus_tag="lmo1237" /note="glutamate racemase; Provisional; Region: PRK00865" /db_xref="CDD:234851" regulatory 1264628..1264633 /regulatory_class="ribosome_binding_site" gene 1264642..1265388 /gene="rph" /locus_tag="lmo1238" /db_xref="GeneID:986029" CDS 1264642..1265388 /gene="rph" /locus_tag="lmo1238" /EC_number="2.7.7.56" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ribonuclease PH" /protein_id="NP_464763.1" /db_xref="GeneID:986029" /translation="MRVDGRESNALRNIEVTPDYLMHPEGSVLIASGNTKVICSASVE TKVPPFMRGEGRGWISAEYSMLPRATNTRNIRESSKGKVTGRTMEIQRLIGRALRAVV DLDALGERTIWLDCDVIQADGGTRTASITGAFIAMVMAIAKLDEAVPFAKFPVKDFLA ATSVGVLEEGGTVLDLNYVEDSAAQVDMNIIMTGSGAFVELQGTGEEATFSETELAEL IALGKKGISELIEIQKETLGDKVTARIKGE" misc_feature 1264642..1265358 /gene="rph" /locus_tag="lmo1238" /note="Ribonuclease PH [Translation, ribosomal structure and biogenesis]; Region: Rph; COG0689" /db_xref="CDD:440453" regulatory 1265379..1265384 /regulatory_class="ribosome_binding_site" /gene="rph" /locus_tag="lmo1238" gene 1265392..1266003 /locus_tag="lmo1239" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986028" CDS 1265392..1266003 /locus_tag="lmo1239" /experiment="EXISTENCE:[PMID:19448609]" /note="hydrolyzes non-standard nucleotides such as xanthine and inosine" /codon_start=1 /transl_table=11 /product="nucleoside-triphosphatase" /protein_id="NP_464764.1" /db_xref="GeneID:986028" /translation="MSKIIIATANKGKAKEFEKIFAKFNIEVATLADFPEIGEIEETG TTFAENAALKAETVASVLNQTVIADDSGLIVDALDGAPGVYSARYAGVAHDDAKNNEK LLKNLEGVEPDKRTARFHCTLAVATPSEKTSFYTGEVEGVIAEQLCGTNGFGYDPLFF LPEFGLTMAEIPAEKKNEISHRANAIKQLEKDLVEVVEKVTKK" misc_feature 1265392..1265991 /locus_tag="lmo1239" /note="XTP/dITP diphosphatase; Region: PRK14822" /db_xref="CDD:184835" misc_feature order(1265419..1265421,1265425..1265430,1265437..1265439, 1265602..1265610,1265647..1265652,1265746..1265748, 1265848..1265850,1265854..1265859,1265932..1265937) /locus_tag="lmo1239" /note="active site" /db_xref="CDD:238285" misc_feature order(1265515..1265523,1265623..1265628,1265635..1265637, 1265644..1265646,1265653..1265655) /locus_tag="lmo1239" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:238285" regulatory 1266027..1266032 /regulatory_class="ribosome_binding_site" gene 1266040..1266564 /locus_tag="lmo1240" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986025" CDS 1266040..1266564 /locus_tag="lmo1240" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464765.1" /db_xref="GeneID:986025" /translation="MKLLVVSDSHSERDCLIHLKEKYENTVDAMIHCGDSELEADDPA IQGFHTVRGNCDFGGGFPNDWVGEVDGYRIFTTHGHLYNIKMTLMNLRYRARELNADF AFFGHSHELGVDMLDDTIILNPGSISLPRGRIRVKTYALIDSTPEGIQVRFMDRDDNE LTDLTQTFPLTKRN" misc_feature 1266043..1266501 /locus_tag="lmo1240" /note="Escherichia coli YfcE and related proteins, metallophosphatase domain; Region: MPP_YfcE; cd00841" /db_xref="CDD:277320" misc_feature order(1266061..1266063,1266067..1266069,1266142..1266144, 1266199..1266204,1266271..1266273,1266358..1266360, 1266364..1266366) /locus_tag="lmo1240" /note="active site" /db_xref="CDD:277320" misc_feature order(1266061..1266063,1266067..1266069,1266142..1266144, 1266199..1266201,1266271..1266273,1266358..1266360, 1266364..1266366) /locus_tag="lmo1240" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:277320" misc_feature order(1266121..1266126,1266184..1266186,1266193..1266207, 1266223..1266258,1266277..1266279) /locus_tag="lmo1240" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:277320" gene 1266675..1266748 /locus_tag="lmot17" /db_xref="GeneID:3167612" tRNA 1266675..1266748 /locus_tag="lmot17" /product="tRNA-Arg" /db_xref="GeneID:3167612" regulatory 1267101..1267106 /regulatory_class="ribosome_binding_site" gene 1267115..1268473 /locus_tag="lmo1241" /db_xref="GeneID:986024" CDS 1267115..1268473 /locus_tag="lmo1241" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1241" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464766.1" /db_xref="GeneID:986024" /translation="MKKMLPESKVEAIRKEGFLNRAVEAYRFFYPTVSNVSNFKALND LGITENHDFIIQLTTPDLNVLTQNSDTPYCLGTGNTENGPVVIELPQGAIVGVADDIN FKFITNMGLTGDEQGKGAKYLYLPPNYDGDIPDGYIVRKPSSYRFLICLRAMVHQASD YEKAFELLKKVKFYPLEEKDNNSTSTFHDFSHRKAISTPYYVEGKFDYWEVIKWALDN DETDPEYYQMYGLLKAIGLAPNKEFNPDIDKKALLIEAAEKADKMMFVNSFNTDDPAA IVWPGKNWEWAVYGENNDFYEKTYLNLPVRERWFYQATLETHMMFMHKVGFGSVYMLG VKDREGNYLDGGKSYTLKVPTPVPTSIFWSVTVYEMDTRSEIVTEQFMPALNSIKDTF EVDADGNTTLYFGPNPPEDESLPWIQTVPDANWFTYFRIYGPTEPAFDNSWQLYDFEE VK" misc_feature 1267130..1268470 /locus_tag="lmo1241" /note="Uncharacterized conserved protein [Mobilome: prophages, transposons]; Region: COG5361" /db_xref="CDD:444136" regulatory complement(1268470..1268508) /regulatory_class="terminator" regulatory 1268481..1268519 /regulatory_class="terminator" gene complement(1268515..1269108) /locus_tag="lmo1242" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986021" CDS complement(1268515..1269108) /locus_tag="lmo1242" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464767.1" /db_xref="GeneID:986021" /translation="MAKTELNPKVDAFLNKPSKWQAEFKTLRDIAIGFELEEELKWGK PCYAINGSNVFLIHGFKNYCALLFMKGALLHDPENILVQQTENVQAGRQIRFTNLQEI LDQKEILKKYIQNAIEVEKAGLEVELKPREETPIPEELFAKFEEMPALQTAFEALTPG RQKAYLLYFAAPKQSKTRVSRIEKYEATILDGLGLND" misc_feature complement(1268518..1269090) /locus_tag="lmo1242" /note="Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family [Function unknown]; Region: YdeI; COG4430" /db_xref="CDD:443542" regulatory complement(1269117..1269122) /regulatory_class="ribosome_binding_site" gene complement(1269262..1269669) /locus_tag="lmo1243" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986018" CDS complement(1269262..1269669) /locus_tag="lmo1243" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1243" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464768.1" /db_xref="GeneID:986018" /translation="MTLNVYLNFRTQSRDAIAFYEEIFGTKCTDLMTYGEIETSEKPI EDSLKDLVMNASLVMDGVKVMFSDVPKSMPLTFGDNITFVIDTSDEIKLTKQFHQLAE GGNVVMPLAKTFWSEKFGEVTDKFGVGWKLNLS" misc_feature complement(1269271..1269663) /locus_tag="lmo1243" /note="Escherichia coli PhnB and similar proteins; Region: PhnB_like; cd06588" /db_xref="CDD:319899" misc_feature complement(order(1269277..1269279,1269307..1269309, 1269394..1269396,1269406..1269408,1269412..1269429, 1269475..1269477,1269484..1269489,1269598..1269600, 1269646..1269663)) /locus_tag="lmo1243" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319899" regulatory complement(1269677..1269682) /regulatory_class="ribosome_binding_site" regulatory 1269821..1269826 /regulatory_class="ribosome_binding_site" gene 1269834..1270433 /locus_tag="lmo1244" /db_xref="GeneID:986020" CDS 1269834..1270433 /locus_tag="lmo1244" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoglycerate mutase" /protein_id="NP_464769.1" /db_xref="GeneID:986020" /translation="MKKTLYLMRHGQTLFNQRKKIQGFCDAPLTDLGINQAKIAGSYF KENNITFDQAYSSTSERASDTLELITDKSYLRLKGLKEWNFGTFEGESEDLNPPLPYG DFFATYGGEREVDFRDRLVATMEHIMSQDNHDTVLAVSHGAACAQFARHWGKTSTIGK VTGLKNCCILKFEYENGRFTLVNFINHDFDKGTHIESTK" misc_feature 1269846..1270379 /locus_tag="lmo1244" /note="Histidine phosphatase superfamily (branch 1); Region: His_Phos_1; pfam00300" /db_xref="CDD:459751" regulatory complement(1270427..1270455) /regulatory_class="terminator" regulatory 1270438..1270466 /regulatory_class="terminator" gene complement(1270465..1270725) /locus_tag="lmo1245" /db_xref="GeneID:986013" CDS complement(1270465..1270725) /locus_tag="lmo1245" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1245" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464770.1" /db_xref="GeneID:986013" /translation="MNLDDLKNKVTESLPLENLGTLTEEATNKASELGEQASNVTENL QNEATNLTENLQDKASGLTENLQDTANELTGGFLDKIKNLFQ" regulatory complement(1270731..1270736) /regulatory_class="ribosome_binding_site" regulatory 1270837..1270842 /regulatory_class="ribosome_binding_site" gene 1270849..1272261 /locus_tag="lmo1246" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986011" CDS 1270849..1272261 /locus_tag="lmo1246" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase" /protein_id="NP_464771.1" /db_xref="GeneID:986011" /translation="MNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQ TGSGKTAAFAIPIAEQVEWEENKPQALIIVPTRELAMQVKTECTNIGRFKRVKAAAIY GQSPFAKQKLELSQKNHIVVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFID QVEDILSRLPKQRQNLFFSATMPEEMQDLIKRYQDNPMVIEMASEKTNPIFHVEMQTD NKEKTLKDVLITENPDSAIIFCNTKNQVDELTDLLDVKASKIHGGLRQEDRFRAMDDF KSGKSRFLIATDVAGRGIDVDNVSLVINYDLPIEKENYVHRIGRTGRAGKSGKAISFV KTNENPLLRDIEEMLDVTIEKKRKPTVIEVKVNEDAFRKKQQKRPTIKKARGEKLNKN IMKLYFNGGKKKKIRAVDFVGTISKLEGITAEDIGIITIEDHVSFVEILNGKGPAVLE MMRSRKVKGRRLKVNEARKR" misc_feature 1270858..1272069 /locus_tag="lmo1246" /note="Superfamily II DNA and RNA helicase [Replication, recombination and repair]; Region: SrmB; COG0513" /db_xref="CDD:440279" misc_feature 1272031..1272249 /locus_tag="lmo1246" /note="RNA recognition motif (RRM) superfamily; Region: RRM_SF; cl17169" /db_xref="CDD:473069" regulatory 1272272..1272277 /regulatory_class="ribosome_binding_site" gene 1272286..1272549 /locus_tag="lmo1247" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986014" CDS 1272286..1272549 /locus_tag="lmo1247" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1247" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464772.1" /db_xref="GeneID:986014" /translation="MERPDNQLILMVLEVVKNPIYNIKSLTINFLQGDIVGNSTRNEL LYCTYWLEFHGFILRDEKGDNQKYYSMTKQGDFLLQKIKNELS" misc_feature 1272286..1272537 /locus_tag="lmo1247" /note="Protein of unknown function (DUF3116); Region: DUF3116; pfam11313" /db_xref="CDD:402765" regulatory 1272704..1272709 /regulatory_class="ribosome_binding_site" gene 1272717..1273193 /locus_tag="lmo1248" /db_xref="GeneID:986009" CDS 1272717..1273193 /locus_tag="lmo1248" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464773.1" /db_xref="GeneID:986009" /translation="MYKYTLCFLQRADEILLLNRQKSPWMGSWNGVGGKIEQGETLLE SVQREITEETGISSNDYEIRDIGEMKWFVDGENLGGMHLFLANLPDNYVYPTPRTTDE GILDFKKRKWILNPENTGVVNNLPYIIEHAPVFPARIEVSTKYQENTLLHISHQSL" misc_feature 1272723..1273169 /locus_tag="lmo1248" /note="MutT homolog-1 and similar proteins; Region: NUDIX_MutT_Nudt1; cd18886" /db_xref="CDD:467596" regulatory complement(1273188..1273220) /regulatory_class="terminator" gene complement(1273231..1273476) /locus_tag="lmo1249" /db_xref="GeneID:986015" CDS complement(1273231..1273476) /locus_tag="lmo1249" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1249" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464774.1" /db_xref="GeneID:986015" /translation="MNKLLLITAAGYIVGVRSIEKENNQSILLNDVYINNPSQRLIDH FESLEIAKEQVIGHKKLSTDDAQNLISRWEASYFTTS" gene complement(1273473..1274678) /locus_tag="lmo1250" /db_xref="GeneID:986007" CDS complement(1273473..1274678) /locus_tag="lmo1250" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="antibiotic resistance protein" /protein_id="NP_464775.1" /db_xref="GeneID:986007" /translation="MKEKLFNKGFVLITLINFVVYLVYYLLMVIIAVIAQEELNASLG EAGFASGIYIIGTLLARLYMGKKLELFGRKRVLRFGILFFLITTMAYLYMPTIAIMFI IRFLNGFAYGTTSTATNAIVTAYIPNSRNGEGINYYGLSTSLAAAIGPFIGMILLSKT SFYTIIIFSTVIVLLTALLCFYLPVKNIILTNEHRKALQTWTVKSFIEYKVIPITFIA FLMGISYSSVLTFLASYAREINLVSAGTFFFVVYALVITFTRPMSGKLFDAKGEKYVM YPSYIFLAVGLVVLSTATSSLVLLISGGLIGLGYGTFMSNGQAVCLKVCEPHRIGIGL STYFIGLDLGLGIGPYIMGEIHHVLSFQGIYIIAGAIAFICVFIYMFLSRKKVSSGAQ EQLKGSEEV" misc_feature complement(1273530..1274642) /locus_tag="lmo1250" /note="Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; Region: MFS_YfcJ_like; cd17489" /db_xref="CDD:341042" misc_feature complement(order(1273644..1273646,1273653..1273658, 1273665..1273670,1273677..1273679,1273725..1273727, 1273737..1273739,1273749..1273754,1273899..1273901, 1273911..1273913,1273989..1273991,1273998..1274006, 1274013..1274018,1274025..1274027,1274241..1274243, 1274250..1274255,1274262..1274264,1274322..1274324, 1274331..1274339,1274343..1274348,1274496..1274498, 1274595..1274597,1274604..1274609,1274616..1274621)) /locus_tag="lmo1250" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341042" regulatory complement(1273486..1273491) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1250" regulatory complement(1274691..1274696) /regulatory_class="ribosome_binding_site" regulatory 1274869..1274874 /regulatory_class="ribosome_binding_site" gene 1274883..1275542 /locus_tag="lmo1251" /db_xref="GeneID:986006" CDS 1274883..1275542 /locus_tag="lmo1251" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Fnr/Crp family transcriptional regulator" /protein_id="NP_464776.1" /db_xref="GeneID:986006" /translation="MKQNILNNYVSTNDFPVITRGKRKYLTYEGLEDSYVYILKKGII KTSIISRDGREFNLNYINKMDIISLLKDEYSQFANAPFNIRVESDTAELYQVDRVRFW KDVNRDVDLQIYVKDYYRTRLLQSIKKMQQMLMNGKLGAICTQLYELYTLFGVEIAPD QFLIDFLVSNEEIGHFCGINSASSVNRIFQQLKKEGVITMQNRYIIIKKLDVIQENVI F" misc_feature 1274925..1275527 /locus_tag="lmo1251" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" gene 1275547..1275810 /locus_tag="lmos45" /db_xref="GeneID:18245141" misc_RNA 1275547..1275810 /locus_tag="lmos45" /product="rli40" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245141" regulatory 1275554..1275589 /regulatory_class="terminator" /locus_tag="lmos45" gene complement(1275845..1276693) /locus_tag="lmo1252" /db_xref="GeneID:986005" CDS complement(1275845..1276693) /locus_tag="lmo1252" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464777.1" /db_xref="GeneID:986005" /translation="MNKNKTGWNIAKIIVGALIFSLAVNVFAIPNNLGEGGVTGLTMM LYYLLGWTPAITTFIFNGILLIIGYKFLDRMTIVWTIVAISFTSIFLHFSEPLAFVAN QTIVAAIFAGLMMGIGMGLIMNGGGTTAGSAILAKIANKYLGWNTSYALLFFDLLVVI PSVFVIGFENMLFTIVSLYISTKVLDFILEGYNPKKSVTIISDYYEEIATEIDANLER GITLFNGQGFYMRQDKKILYIVISRDQLLPLTKIVNKYDEKAFFIINDVQSVVGEGFT KQITSE" misc_feature complement(1275863..1276690) /locus_tag="lmo1252" /note="Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains [Function unknown]; Region: YitT; COG1284" /db_xref="CDD:440895" regulatory complement(1276701..1276706) /regulatory_class="ribosome_binding_site" gene 1276713..1277207 /locus_tag="lmos46" /db_xref="GeneID:18245142" misc_RNA 1276713..1277207 /locus_tag="lmos46" /product="rli41" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245142" gene 1277312..1278025 /locus_tag="lmo1253" /db_xref="GeneID:984383" CDS 1277312..1278025 /locus_tag="lmo1253" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="NP_464778.1" /db_xref="GeneID:984383" /translation="MNKKNKFFDIYLELEQDITSGVYPAGTLLPSENVLAKRFSVSRE TIRKALVLLLENGCIQKLQGKGSIVIDRERYSFPVSGLTSFKELQKSEQMNATTEVIR NEETTLPDRIADFAGLPHGSNCLAILRVRYLEGEATILDYDYLLDKTEPIANEILEDS LYQYLENEKGYEISYAQKEITVEPLNAEDKKYLALHGDTHVVVVKSTVFLKDTTLFQY TESRHRLDKFRFIDFARRR" misc_feature 1277327..1278019 /locus_tag="lmo1253" /note="trehalose operon repressor, B. subtilis-type; Region: trehalos_R_Bsub; TIGR02404" /db_xref="CDD:274116" regulatory complement(1278018..1278050) /regulatory_class="terminator" regulatory 1278029..1278050 /regulatory_class="terminator" gene complement(1278056..1279702) /locus_tag="lmo1254" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986004" CDS complement(1278056..1279702) /locus_tag="lmo1254" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alpha,alpha-phosphotrehalase" /protein_id="NP_464779.1" /db_xref="GeneID:986004" /translation="MTKFAQKTIYQVYPKSFYDTTGDGTGDIPGITAKLDYLQKLGIE MIWLNPFYPSPQNDNGYDIADYTAVDPLFGTMDDVTTLIKEAKKRNIGIMIDLVLNHT STEHPWFKKALAGDPFYRDFYYFRPAKADGSPPTNWVSKFGGNAWEKLPDSSEYYLHL YDVTQADLDWANPNVREALFAVVNFWIDKGVEGFRLDVLNVIAKPKFLEDDFEGDGRR FYTDGPGIHAYLKELHERTFGDKPIITVGEMSSTDIDNCIRYSNPDEKELSMVFHFHH LKVDYPDGEKWRLADVNFENLKSIFHTWQVAMSDENGWDALFWNNHDQPRALGRFASD KPEHYYHSATLLGATIHFMRGTPFVYMGEEIGMMNPKFPTIDDYVDVETLNHFDILQK NGLSEQEVMEIIKERSRDNSRTPMQWDDSQNAGFTTGTPWLKVADNANEINVQTALSN KTSIFYFYQKLIALRKEHPVIQTGDYTPYLTEEDSIIAYKRSNETTSLLSIHHFGSEK KKIQLPTEFLNAEVLLSNYERQRISSELELAPYETLTLIQ" misc_feature complement(1278059..1279696) /locus_tag="lmo1254" /note="alpha,alpha-phosphotrehalase; Region: trehalose_treC; TIGR02403" /db_xref="CDD:274115" regulatory complement(1279712..1279717) /regulatory_class="ribosome_binding_site" gene complement(1279721..1281205) /locus_tag="lmo1255" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986002" CDS complement(1279721..1281205) /locus_tag="lmo1255" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS trehalose transporter subunit IIBC" /protein_id="NP_464780.1" /db_xref="GeneID:986002" /translation="MVDYKKDASALLELIGGKENISSVTHCATRMRFVLQDPDNADVE AIEDIPAVKGTFTQAGQFQVIIGNDVAIFYNEFSKISGVEGVNKEDAKVDAKKNMSLL QRLLAGLAEIFTPLIPAIVVGGLILGFRNVIGDIKFLEDGTKTIVDVYPFWAGVYSFL WLIGEAVFHFLPVGITWSIAKKMGTTQILGIVLGLTLVSPQLLNAYSVVETKAGDIPV WDFGFAQVQMIGYQAQVIPAIMAGFLLAYLEIWLRKFIPNAISMIFVPFFALVPTVLA AHVILGPIGWKIGDAISNVVYAGLTGGLSWLFAALFGFLYAPLVVTGLHHMTNAIDLQ LMSQFGGTNLWPMIALSNIAQGSAVLAIIFLHRGNEKEEQVSIPATISCYLGVTEPAM FGINLKYLYPFVAAMIGSAIAAVVSVSSGVMANSIGVGGLPGILSINPKYYAVFAVCM LITIVVPFILTVLFRKYNILNKVDTAPIRTFGKKEYRESAKTTN" misc_feature complement(1279808..1281193) /locus_tag="lmo1255" /note="PTS system, trehalose-specific IIBC component; Region: PTS-IIBC-Tre; TIGR01992" /db_xref="CDD:273916" regulatory complement(1281213..1281218) /regulatory_class="ribosome_binding_site" regulatory 1281308..1281313 /regulatory_class="ribosome_binding_site" gene 1281321..1281773 /locus_tag="lmo1256" /db_xref="GeneID:985998" CDS 1281321..1281773 /locus_tag="lmo1256" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1256" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464781.1" /db_xref="GeneID:985998" /translation="MKHIRVAAIIRHQNKILLHTTKNENYWTLPGGAVENELTKEGLQ REMREELGEEVTIRELKIIAENRFVYRGEEMDSIEFYYIVELYPNSALLELSTFTKIE QFGQNGETDYELNFKWFEIDKVSEIEILPKFLQTELTQLSSDRIKHIQ" misc_feature 1281327..1281734 /locus_tag="lmo1256" /note="uncharacterized NUDIX hydrolase subfamily; Region: NUDIX_Hydrolase; cd04688" /db_xref="CDD:467570" regulatory complement(1281775..1281814) /regulatory_class="terminator" regulatory 1281788..1281824 /regulatory_class="terminator" gene complement(1281820..1282284) /locus_tag="lmo1257" /db_xref="GeneID:985997" CDS complement(1281820..1282284) /locus_tag="lmo1257" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1257" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464782.1" /db_xref="GeneID:985997" /translation="MDNCLAQLQMYDYLLKKYRNKEVFPDTRMIVEIDGKLWTGDFLQ LDDCHIIEIDWEDTRFTRIERTKDAINDEFNEKVTNSNVNVSENRIDSKIGSLKNIEI LYQEIGNFVRQVESSTTTLKPLLYNAYCLDTRVKLPFLDLSKKEITLVSLTN" regulatory complement(1282293..1282298) /regulatory_class="ribosome_binding_site" regulatory 1282460..1282465 /regulatory_class="ribosome_binding_site" gene 1282473..1283393 /locus_tag="lmo1258" /db_xref="GeneID:985992" CDS 1282473..1283393 /locus_tag="lmo1258" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1258" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464783.1" /db_xref="GeneID:985992" /translation="MYKQMKLKATDGLDLHLHIWDEVENPVGVVQIVHGMAEHGARYG VFAERLNEAGYIVVADDHRGFGKSAIDESYLGHLDGETGFQDMIKDEVVVRTYLKETY PGLSYFIFAHSMGSFVIRTFMAQHQVDGVILSGSGLQPIPLLKMGQIITKQRIKKDEM KRSGFLNKLAFWGYNKPFNENHRFSWLSRDVAIYEAYEKDPFCGPVVGTSGFFHNLFE AVKISQQKETVESVPKDLPILLLSGSDDPVGHFGKDTPKIALALEAAGVEDVTYKIYE DARHELVNELCKETVFKDVIAWLNTKNKEA" misc_feature 1282545..1283330 /locus_tag="lmo1258" /note="Serine aminopeptidase, S33; Region: Hydrolase_4; pfam12146" /db_xref="CDD:463473" regulatory complement(1283373..1283406) /regulatory_class="terminator" regulatory 1283378..1283411 /regulatory_class="terminator" gene complement(1283413..1284660) /gene="proA" /locus_tag="lmo1259" /db_xref="GeneID:985995" CDS complement(1283413..1284660) /gene="proA" /locus_tag="lmo1259" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway" /codon_start=1 /transl_table=11 /product="gamma-glutamyl phosphate reductase" /protein_id="NP_464784.1" /db_xref="GeneID:985995" /translation="MTELIKKGSAAKEAAQFLAQASTKQKNAALLNLSNDLLTHTASL LEENNKDIIRAREKGTPETMIDRLRLTEERIKEISEAVKQVVALKDPIGEVTNMWKNE AELTIGKTRVPLGVIGIIYESRPNVTVDASVLCFKTGNAVILRGGSDAIDSNKALMSV IQDSLEASGFPRSSVQLIEDTSRETARDMMRLNRFLDVLIPRGGAKLIQTVLENATVP VIETGTGNCHIYVDKAAEKQMAIDILVNAKCSRPSVCNAAETLLIHRDVADAFLPEIE TALKEYNVELRADERAREILKDSKAATESDWEDEFLDFILAIKVVDSVDEAINHINKY GTKHSEAIISNDYATGQAFHQKVDAAAVYINASTRFTDGFAMGFGAEIGISTQKLHAR GPMGLTELTSTKYIIFGDGQIRN" misc_feature complement(1283419..1284660) /gene="proA" /locus_tag="lmo1259" /note="gamma-glutamyl phosphate reductase; Provisional; Region: proA; PRK00197" /db_xref="CDD:234685" misc_feature complement(1283896..1283898) /gene="proA" /locus_tag="lmo1259" /note="putative catalytic cysteine [active]" /db_xref="CDD:143398" gene complement(1284644..1285474) /gene="proB" /locus_tag="lmo1260" /db_xref="GeneID:985996" CDS complement(1284644..1285474) /gene="proB" /locus_tag="lmo1260" /EC_number="2.7.2.11" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis" /codon_start=1 /transl_table=11 /product="gamma-glutamyl kinase" /protein_id="NP_464785.1" /db_xref="GeneID:985996" /translation="MRESLKNSKRLVIKVGTSTLMYGNGHINLRTIEKLAMVLSDLRN EGKEVILVSSGAIGVGCHKLQLPVRPTSIPEQQAVASVGQSELMHIYSKFFGEYGQVV GQVLLTRDVTDFPISRENVMNTLESLLERGIIPIVNENDTVAVEELEHVTKYGDNDLL SAIVAKLVQADLLIMLSDIDGFYGSNPSTDPDAVMFSEINQITPEIEALAGGKGSKFG TGGMLTKLSAASYCMNANQKMILTNGKNPTIIFDIMQGEQIGTLFASKKEEFSHDGTH " misc_feature complement(1284674..1285474) /gene="proB" /locus_tag="lmo1260" /note="gamma-glutamyl kinase; Provisional; Region: PRK12314" /db_xref="CDD:183430" misc_feature complement(order(1284800..1284802,1284812..1284814, 1284818..1284820,1284926..1284931,1284938..1284946, 1285421..1285423)) /gene="proB" /locus_tag="lmo1260" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:239775" misc_feature complement(order(1285046..1285051,1285055..1285057, 1285085..1285087,1285094..1285096,1285112..1285117, 1285157..1285159,1285163..1285165,1285232..1285234, 1285244..1285246,1285334..1285336,1285343..1285348)) /gene="proB" /locus_tag="lmo1260" /note="homotetrameric interface [polypeptide binding]; other site" /db_xref="CDD:239775" misc_feature complement(1285289..1285312) /gene="proB" /locus_tag="lmo1260" /note="putative phosphate binding site [ion binding]; other site" /db_xref="CDD:239775" misc_feature complement(order(1285007..1285009,1285052..1285054, 1285307..1285309)) /gene="proB" /locus_tag="lmo1260" /note="putative allosteric binding site [active]" /db_xref="CDD:239775" regulatory complement(1284670..1284675) /regulatory_class="ribosome_binding_site" /gene="proB" /locus_tag="lmo1260" regulatory complement(1285484..1285489) /regulatory_class="ribosome_binding_site" regulatory complement(1285576..1285602) /regulatory_class="terminator" gene complement(1285610..1286749) /locus_tag="lmo1261" /db_xref="GeneID:985993" CDS complement(1285610..1286749) /locus_tag="lmo1261" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1261" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464786.1" /db_xref="GeneID:985993" /translation="MSEWYFKKNEQKVGPFTNVEMIALYRKKEINNLTLVQKSPHPEW VVFKQTELHQHALNHGNSELKIGNLFSAVFKKHSKEEGEKVFIAGTKYTTPATSDIPH TWPHPWVFSRVFLVLIITYFLLLACTYLFDNSNTIPGLMVIGSFAVPFSVLLFFFETN APRNISVFDVVKMFFIGGVAALVATLVIYSIIPVGKLNYFNALLVGFIEETGKMIIVA LFIRSLNSKYILNGLLIGAAVGAGFAAFESLGYAFNYSVDAAFLFKDIHIAGETMMNV IFSRGWQSIGGHVVWAAITGAALVIAKGDQKLGMHHIFTGTFWKWFIIPIALHFVWDC PFNPLPAIAFKQIVLIVIVWFVILRLISKGLKQVSVISAASKATK" misc_feature complement(<1286642..1286740) /locus_tag="lmo1261" /note="GYF domain 2; Region: GYF_2; pfam14237" /db_xref="CDD:464112" misc_feature complement(1285661..1286419) /locus_tag="lmo1261" /note="Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family [Signal transduction mechanisms]; Region: PrsW; COG2339" /db_xref="CDD:441909" regulatory complement(1286758..1286763) /regulatory_class="ribosome_binding_site" gene complement(1286830..1287225) /locus_tag="lmo1262" /db_xref="GeneID:985990" CDS complement(1286830..1287225) /locus_tag="lmo1262" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464787.1" /db_xref="GeneID:985990" /translation="MPNLSNRLTLLREKQGWSKAETARRLGLKAPSTYGNWEYGIREP DLEMVTQIATLYDVSVDYLLGQQSIPTYAPSELQNEKDIGKRITKISEDLKYEDDLNL DGQPLNESAAAFLADSINFLYEQAKKIND" misc_feature complement(1287022..1287225) /locus_tag="lmo1262" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" regulatory complement(1287232..1287237) /regulatory_class="ribosome_binding_site" regulatory 1287363..1287368 /regulatory_class="ribosome_binding_site" gene 1287376..1287591 /locus_tag="lmo1263" /db_xref="GeneID:985085" CDS 1287376..1287591 /locus_tag="lmo1263" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_464788.1" /db_xref="GeneID:985085" /translation="MKTVDTRRINTTKIRELRLQRGITQAFIARRMGYRYTSGYSNIE KGTVRLSHKNAVILSEILMCDLKFFYE" misc_feature 1287412..1287582 /locus_tag="lmo1263" /note="Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators; Region: HTH_XRE; cd00093" /db_xref="CDD:238045" misc_feature order(1287418..1287420,1287430..1287432,1287508..1287510) /locus_tag="lmo1263" /note="non-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" misc_feature order(1287427..1287429,1287505..1287507) /locus_tag="lmo1263" /note="salt bridge [active]" /db_xref="CDD:238045" misc_feature order(1287448..1287453,1287484..1287486,1287496..1287498, 1287508..1287513) /locus_tag="lmo1263" /note="sequence-specific DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238045" regulatory 1287697..1287702 /regulatory_class="ribosome_binding_site" gene 1287710..1288243 /locus_tag="lmo1264" /db_xref="GeneID:985081" CDS 1287710..1288243 /locus_tag="lmo1264" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1264" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464789.1" /db_xref="GeneID:985081" /translation="MRKKTLAVFLIFTVLVALLAPTNASAYTKLGYVMTKSSAKNFKI YINGSAKGFKNIIISGAKAWNPSPYLNTVSIGNDVRPNYTVSSSGTNKGSVLAVCNTT YYKSNKLISKNEITLYKGFRSLSTNHKIETIVHEFGHGFGLGHVKTKNAIMLDKGFIN KTKPQTDDFNGIKALYK" misc_feature 1287827..1288237 /locus_tag="lmo1264" /note="Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which...; Region: ZnMc; cl00064" /db_xref="CDD:469599" misc_feature order(1288112..1288117,1288124..1288126,1288142..1288144) /locus_tag="lmo1264" /note="active site" /db_xref="CDD:238124" regulatory 1288248..1288253 /regulatory_class="ribosome_binding_site" gene 1288261..1288926 /locus_tag="lmo1265" /db_xref="GeneID:985747" CDS 1288261..1288926 /locus_tag="lmo1265" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464790.1" /db_xref="GeneID:985747" /translation="MKNRITMIAGIVCLSILTACSSSESVKGTTSEEQTTSQSGAEMI KANNGVVSYHGKYLKLAENMDNLEKDAPIIIKATKKSEKTTVTKETKENVFPTDFYTM SDVQINSIEKDTTGKLSENMTIKVLEYSVENVLVEGEEYDLTIDGYKNMEKGEEYTLF LEKNPDGDNYILSNAVISKFPVEELSEEELFLDGGQATEETDSIEEIYQEVYQEVLEE YSE" regulatory 1288945..1288983 /regulatory_class="terminator" regulatory 1289175..1289180 /regulatory_class="ribosome_binding_site" gene 1289188..1290126 /locus_tag="lmo1266" /db_xref="GeneID:985084" CDS 1289188..1290126 /locus_tag="lmo1266" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1266" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464791.1" /db_xref="GeneID:985084" /translation="MSGSGAFFPMSVKKFLEKGITSLSEEEKMSTLHYLENAYHQEPC NEEIVHRLIQFYNQTDKTKKAQEIGQNFLTMNGYNKEILGELSVTFMKEDNMDTYFTL VRHYMEEEKKEATEEIADNVIPFPKQFVPRRDIREFASWQTTEQLEFLQEARFLEIDS FLSAFKDFLADDTFSPFVQSMIFELMQEKEINEDVTVRKIDKHGTFNPSLVPMLADNK FAEAIFAGLAEMLEHSNPSLLEQVIGIIQQHLFMLYPFELEPREVDVWVNAYYKWANA MYGNYCVISDDVNHLAVEEAISIIEELEIRQQNYFI" regulatory 1290225..1290230 /regulatory_class="ribosome_binding_site" gene 1290241..1291524 /gene="tig" /locus_tag="lmo1267" /db_xref="GeneID:985096" CDS 1290241..1291524 /gene="tig" /locus_tag="lmo1267" /experiment="EXISTENCE:[PMID:19448609]" /note="Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer" /codon_start=1 /transl_table=11 /product="trigger factor" /protein_id="NP_464792.1" /db_xref="GeneID:985096" /translation="MSVKWEKQEGNVGKLTFEIEQEKVKEGLDRAFVKVRKTLNVPGF RKGKVPRQIFNQRFGEEALFQDALDILLPEVYSAAIDEAGIDPVDTPQVNIESMEKGE TWVLTAEVTVKPEVKLGDYKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPA ENGDTVILDFEGFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELT FPEEYHAEDLAGQPVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRL QEAKEESVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELY YQFTGQTEEAMHAQMEKDAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGM EKDAVRAALGDMSELKSDLKIRKAIDVLLDSAVEK" misc_feature 1290241..1291521 /gene="tig" /locus_tag="lmo1267" /note="FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]; Region: Tig; COG0544" /db_xref="CDD:440310" regulatory 1291695..1291700 /regulatory_class="ribosome_binding_site" gene 1291710..1292969 /gene="clpX" /locus_tag="lmo1268" /db_xref="GeneID:985086" CDS 1291710..1292969 /gene="clpX" /locus_tag="lmo1268" /experiment="EXISTENCE:[PMID:19448609]" /note="binds and unfolds substrates as part of the ClpXP protease" /codon_start=1 /transl_table=11 /product="ATP-dependent protease ATP-binding subunit ClpX" /protein_id="NP_464793.1" /db_xref="GeneID:985086" /translation="MFKFNDEKGQLKCSFCGKTQDQVRKLVAGPGVYICDECIELCNE IIEEELGISEFVDFGEVPKPQEIRHILSDYVIGQERAKKALAVAVYNHYKRINSNETK EDEVELSKSNICLIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENIL LKLIQSADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVA SVPPQGGRKHPHQELIQIDTGNILFIVGGAFDGIEQIVKNRMGEKVIGFGTDNAKLKD DETYLSRVVPEDLLKFGLIPEFIGRLPVIATLEQLDEAALVSILTEPKNALVKQYKRM LELDDVELEFEPTALIEIAKEAIERKTGARGLRSIIEQIMLEVMFEIPSRDDITKCII TEKAARGEEEPQLQLEDGSIIPIKTSA" misc_feature 1291719..1292924 /gene="clpX" /locus_tag="lmo1268" /note="ATP-dependent protease Clp, ATPase subunit ClpX [Posttranslational modification, protein turnover, chaperones]; Region: ClpX; COG1219" /db_xref="CDD:440832" regulatory 1292976..1293008 /regulatory_class="terminator" regulatory 1293072..1293077 /regulatory_class="ribosome_binding_site" gene 1293088..1293654 /locus_tag="lmo1269" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985087" CDS 1293088..1293654 /locus_tag="lmo1269" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="type I signal peptidase" /protein_id="NP_464794.1" /db_xref="GeneID:985087" /translation="MKSENKFFSGAFGWIKIILIALILAFGIRYFLISPVTVNGKSMD PTLHDGEHLFINKVSDPKRFDIIVFPAPDEENAEYIKRVIGLPGDKVEYKEDQLYING KKYDEPYLDSEKAALKNGFLTTDAEGDPNFTMADIPNSDGSLTVPKGELFVLGDNRQV SKDSRYIGFISQDTVLGKVISFGKSLER" misc_feature 1293163..1293627 /locus_tag="lmo1269" /note="Signal peptidase, peptidase S26; Region: Peptidase_S26; pfam10502" /db_xref="CDD:431321" regulatory 1293675..1293680 /regulatory_class="ribosome_binding_site" gene 1293689..1294258 /locus_tag="lmo1270" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985113" CDS 1293689..1294258 /locus_tag="lmo1270" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="type I signal peptidase" /protein_id="NP_464795.1" /db_xref="GeneID:985113" /translation="MTDQNEKKPKKKSGAHQLLSWVLVIVAALAIALVIRNFVVAPVK VEGTSMVPTYQDGDRIFIEKISKPDRFDIIVFDEPPMIGSGEHFIKRVIGMPGDKVAF KNGELYLNGKRKVESYLPEGTLTLWNPDPTQKPYIADYTLEDMTGESTVPKGKLFVLG DNRGGSSDSRVFGFIDDSMVNGTVIQFGK" misc_feature 1293740..1294243 /locus_tag="lmo1270" /note="Signal peptidase, peptidase S26; Region: Peptidase_S26; pfam10502" /db_xref="CDD:431321" regulatory 1294293..1294350 /regulatory_class="terminator" regulatory 1294344..1294349 /regulatory_class="ribosome_binding_site" gene 1294360..1294902 /locus_tag="lmo1271" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985089" CDS 1294360..1294902 /locus_tag="lmo1271" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="type I signal peptidase" /protein_id="NP_464796.1" /db_xref="GeneID:985089" /translation="MKEKNLKRLWSWIWAAVLAVLIAVIIRFYLFVPILVDGISMMPT LHNDDRVIINRFGNVDRFDVIVFRESDGKEYIKRVIGLPGDTVEYKEDQLYINGKKYN EPYLDTYKEKLKDGYLTDDYSSKDQLDGGKIPKDTYFVLGDNRRASKDSRIIGPIPFS KVLGTTPICYWPIEDAKLID" misc_feature 1294384..1294872 /locus_tag="lmo1271" /note="Signal peptidase, peptidase S26; Region: Peptidase_S26; pfam10502" /db_xref="CDD:431321" regulatory 1294901..1294906 /regulatory_class="ribosome_binding_site" gene 1294912..1295775 /gene="rbgA" /locus_tag="lmo1272" /gene_synonym="ylqF" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985097" CDS 1294912..1295775 /gene="rbgA" /locus_tag="lmo1272" /gene_synonym="ylqF" /experiment="EXISTENCE:[PMID:19448609]" /note="essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc)" /codon_start=1 /transl_table=11 /product="ribosomal biogenesis GTPase" /protein_id="NP_464797.1" /db_xref="GeneID:985097" /translation="MTIQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPML EEIIHQKRRVIILNKADTADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEK LMAEKFDRLRSKGMKPRAIRAMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQW IKVGKTLELLDTPGILWPKFEDQEIGYKLALTGAIKDDLLQMEEIAGYGLRFLENHYP DRLQTWLKVETVSEDPIETLAFIAEKRGLLDRYNDPDYSRAAETVVREIRQQKLGRMS FDFPNWEDEVE" misc_feature 1294918..1295745 /gene="rbgA" /locus_tag="lmo1272" /gene_synonym="ylqF" /note="ribosome biogenesis GTP-binding protein YlqF; Region: GTPase_YlqF; TIGR03596" /db_xref="CDD:274669" regulatory 1295756..1295761 /regulatory_class="ribosome_binding_site" /gene="rbgA" /locus_tag="lmo1272" /gene_synonym="ylqF" gene 1295772..1296557 /gene="rnhB" /locus_tag="lmo1273" /db_xref="GeneID:985073" CDS 1295772..1296557 /gene="rnhB" /locus_tag="lmo1273" /experiment="EXISTENCE:[PMID:19448609]" /note="RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids" /codon_start=1 /transl_table=11 /product="ribonuclease HII" /protein_id="NP_464798.1" /db_xref="GeneID:985073" /translation="MSDSISVIKEKLSEVTSENDPFFQKCIQDERKGVEKLVQSVRRK WEKEAKLLVKLKEMTQYETDLFQQGYKYIAGVDEVGRGPLAGPVVAAAVILPADFSVV GINDSKQLSEAKRDALFEKIKKEAIAIGVGIIEHDVIDQVNIYEATKLAMCEALNQLT PEPDFVLIDAMPLRYTEAELSLIKGDTKSISIAAASIIAKVTRDRLMQMYDEKYPGYD FANNMGYGTKKHLLGLDTIGICPIHRMSFSPVKESKLHFDSLN" misc_feature 1295967..1296527 /gene="rnhB" /locus_tag="lmo1273" /note="Ribonuclease HII [Replication, recombination and repair]; Region: RnhB; COG0164" /db_xref="CDD:439934" regulatory 1296577..1296602 /regulatory_class="terminator" regulatory 1296677..1296682 /regulatory_class="ribosome_binding_site" gene 1296691..1297551 /locus_tag="lmo1274" /db_xref="GeneID:987273" CDS 1296691..1297551 /locus_tag="lmo1274" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="polypeptide deformylase" /protein_id="NP_464799.1" /db_xref="GeneID:987273" /translation="MDFKQRNTWLKLASCKSISAKKRAVIWQKLKELDQYEMAAHTFV ESFFPVDKRAQILMEIETAEVFFLEGITPIWILEDSYPALLREVYEAPPILFCKGNID LLQRQAIAIVGTRQMSEYGRKACMKIASELSAHDLTIISGMAIGIDTIAHKATLNKNG ATIAVLGSGVNKIYPKKNEFLAKEIAKEGLLLSEYLPSQEAKRWHFPERNRIISGLAI GTVIIEAAERSGSLITADIALEQNRQVFAVPGNIFIDTWQGTNYLIQEGAKLVMNADH IIEEFFQIKP" misc_feature 1296703..>1297533 /locus_tag="lmo1274" /note="Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake [Replication, recombination and repair]; Region: Smf; COG0758" /db_xref="CDD:440521" regulatory 1297806..1297811 /regulatory_class="ribosome_binding_site" gene 1297823..1299901 /gene="topA" /locus_tag="lmo1275" /db_xref="GeneID:985095" CDS 1297823..1299901 /gene="topA" /locus_tag="lmo1275" /EC_number="5.99.1.2" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity" /codon_start=1 /transl_table=11 /product="DNA topoisomerase I" /protein_id="NP_464800.1" /db_xref="GeneID:985095" /translation="MADYLVIVESPAKAKTIEKYLGKKFKVKASMGHVRDLPKSQMGV DTENDYEPRYITIRGKGPVLKELKQAAKKAKKVYLAADPDREGEAIAWHLANSLELDQ SDKLRVVFNEITKEAVKESFKTPRKIDMDLVNAQQARRILDRLVGYNISPILWKKVKK GLSAGRVQSIALRIIIDREKEINNFKPEEYWTIDGNFLKGKKKFQANFYGVNGKKKKL STADDVKEVMSAIKGKSFDVTDVTKKERLRNPAAPFTTSSLQQEAARKLNYRTRKTMM LAQQLYEGITLGKQGTVGLITYMRTDSTRIADSAILEASNYIKETYGPEFSRNHKRSD KNAKGAQDAHEAIRPTSAMRSPQEVKEYLTRDQLRLYRLIWERFIASQMTPAVLDTMR VDLDNNGVNFRANGSKIKFHGFMKVYVESNDDNTEEKENILPDLKKGDKVQSESLEQR QHFTQPPPRYTEARLVKTLEEIGIGRPSTYSPTLDTIQRRNYVSLTNKRFIPTELGEI VNEMIEEYFPEILDVKFTANMESELDEVEHGEVEWVKVIDEFYKRFEPNVIKADAEME KIEIKDEPAGIDCDLCGAPMVYKMGKYGKFLACSRFPDCRNTKAIVKEIGVTCPKCEK GHVIERKSKKKRIFYGCDRYPDCDYVSWDKPVERACPKCEKRALVEKKLKKGVQVQCT NCDYKESTQQ" misc_feature 1297823..1299772 /gene="topA" /locus_tag="lmo1275" /note="DNA topoisomerase I; Validated; Region: PRK06599" /db_xref="CDD:235840" regulatory 1299951..1299956 /regulatory_class="ribosome_binding_site" gene 1299964..1301268 /gene="gid" /locus_tag="lmo1276" /db_xref="GeneID:985107" CDS 1299964..1301268 /gene="gid" /locus_tag="lmo1276" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="tRNA (uracil-5-)-methyltransferase Gid" /protein_id="NP_464801.1" /db_xref="GeneID:985107" /translation="MEKSVNVIGAGLAGSEAVWQLVNRGVKVDLYEMRPVKQTPAHHT DKFAELVCTNSLRANGLTNAVGVIKEEMRMLDSIIIEAADKASVPAGGALAVDRHEFS GYITDKVKNHPLVTVHTEEVTTIPEGPTIIATGPLTSPALADEIKQLTGEEYLYFYDA AAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMSEEEFNAFYEALVTAETAALKEFEK EVFFEGCMPIEVMAKRGIKTMLFGPLKPVGLEDPKTGKRPYAVLQLRQDDAAGTLYNM VGFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLF FAGQMTGVEGYVESAASGLAAGINAANFIQEKELVVFPTETAIGSLAHYITSASKKSF QPMNVNFGLFPELETKIRAKQERNEKLAERALNAIKKVAEEL" misc_feature 1299970..1301265 /gene="gid" /locus_tag="lmo1276" /note="Folate-dependent tRNA-U54 methylase TrmFO/GidA [Translation, ribosomal structure and biogenesis]; Region: TrmFO; COG1206" /db_xref="CDD:440819" regulatory 1301536..1301541 /regulatory_class="ribosome_binding_site" gene 1301551..1302453 /gene="codV" /locus_tag="lmo1277" /db_xref="GeneID:985098" CDS 1301551..1302453 /gene="codV" /locus_tag="lmo1277" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="integrase/recombinase" /protein_id="NP_464802.1" /db_xref="GeneID:985098" /translation="MIQEGKLEQQFFDYLHSERNYSVNTSTAYENDLLDFRRFLNEQA ITTYQQVTFLDVRIYLTELKQKSFSRTTVARKISSLRSFYTFLLRENVINENPFTYVS HAKNQLRLPKFFYSEEMEALFQVVYEDNETLTLRDRVLLEVLYGTGIRVSECAGILLP DLDTSYQAILIRGKGNKERYVPFGAYAEDAITDYLPERVNLMSRYKKSHDALLVNHYG DPLTTRGIRYCLTKIISKASLTRKIHPHMLRHTFATDLLNNGADMRTVQELLGHASLS STQIYTHVTKEHLKSTYMKHHPRA" misc_feature 1301575..1302450 /gene="codV" /locus_tag="lmo1277" /note="tyrosine recombinase XerC; Region: recomb_XerC; TIGR02224" /db_xref="CDD:274042" misc_feature order(1301998..1302000,1302286..1302288,1302295..1302300, 1302391..1302393) /gene="codV" /locus_tag="lmo1277" /note="active site" /db_xref="CDD:271179" regulatory 1302460..1302465 /regulatory_class="ribosome_binding_site" gene 1302474..1303013 /gene="clpQ" /locus_tag="lmo1278" /db_xref="GeneID:985099" CDS 1302474..1303013 /gene="clpQ" /locus_tag="lmo1278" /experiment="EXISTENCE:[PMID:19448609]" /note="heat shock protein involved in degradation of misfolded proteins" /codon_start=1 /transl_table=11 /product="ATP-dependent protease peptidase subunit" /protein_id="NP_464803.1" /db_xref="GeneID:985099" /translation="MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLF HDKVIAGFAGSVADAFTLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLI VMDKDTLLLVSGTGEVIEPDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHAL EIASEICVFTNDHITVEEL" misc_feature 1302486..1303010 /gene="clpQ" /locus_tag="lmo1278" /note="ATP-dependent protease subunit HslV; Region: PRK05456" /db_xref="CDD:235477" misc_feature order(1302489..1302491,1302537..1302539,1302543..1302545, 1302588..1302590,1302861..1302863) /gene="clpQ" /locus_tag="lmo1278" /note="active site" /db_xref="CDD:238894" misc_feature order(1302558..1302566,1302738..1302740,1302819..1302821, 1302831..1302833,1302870..1302875,1302882..1302884, 1302906..1302908,1302945..1302947,1302957..1302959, 1302966..1302971,1302975..1302977) /gene="clpQ" /locus_tag="lmo1278" /note="HslU subunit interaction site [polypeptide binding]; other site" /db_xref="CDD:238894" regulatory 1303014..1303019 /regulatory_class="ribosome_binding_site" gene 1303027..1304436 /gene="hslU" /locus_tag="lmo1279" /db_xref="GeneID:985103" CDS 1303027..1304436 /gene="hslU" /locus_tag="lmo1279" /experiment="EXISTENCE:[PMID:19448609]" /note="heat shock protein involved in degradation of misfolded proteins" /codon_start=1 /transl_table=11 /product="ATP-dependent protease ATP-binding subunit HslU" /protein_id="NP_464804.1" /db_xref="GeneID:985103" /translation="MTNLTLRNQLTPKQIVEKLDQYIIGQNGAKKSVAVALRNRYRRQ LMDESIRDEIIPKNILMIGPTGVGKTEIARRIAKIVRAPFSKVEATKFTEVGYVGRDV ESMVRDLVEVSVRLVKEEKMQLVRVKAEKNAEKRLIKLLAPSQKKKQTTSQNPLEALF GGMNQPDESPEEEVDQELKNKRSQIEWRLQNGELDDEIVTVEVKEQQNPMLDMMRGAG MDQMNGMQDALSGMFPAKKKKRKVTVREAKKILFEDEASKLIDADELAAEGIHRAEQM GMIFIDEIDKIASKEGGGNAQVSREGVQRDILPIVEGSQISTKYGTVNTEYILFIAAG AFHMSKPSDLIPELQGRFPIRIELDKLTQEDFYKILTEPDNALIKQYKALLKTEGIDL IFTKEAVERIAEIAFQVNQDSDNIGARRLHTILEKLLEDLLFEAPEINMESIKVTENY VNEKLAPIMQNKDLTQFIL" misc_feature 1303048..1304433 /gene="hslU" /locus_tag="lmo1279" /note="ATP-dependent protease HslVU (ClpYQ), ATPase subunit HslU [Posttranslational modification, protein turnover, chaperones]; Region: HslU; COG1220" /db_xref="CDD:440833" regulatory 1304443..1304448 /regulatory_class="ribosome_binding_site" gene 1304457..1305236 /gene="codY" /locus_tag="lmo1280" /db_xref="GeneID:985108" CDS 1304457..1305236 /gene="codY" /locus_tag="lmo1280" /experiment="EXISTENCE:[PMID:19448609]" /note="CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor" /codon_start=1 /transl_table=11 /product="transcriptional repressor CodY" /protein_id="NP_464805.1" /db_xref="GeneID:985108" /translation="MTLLEKTRKINAMLQNAAGKTVNFKEMADTLTDVIEANTYIVSR KGKLLGYSEALPIENDRMKQMLTERQFPEEYTQSLFNVGETSSNLEVSSQYTAFPIEN SELFTKGLTTIVPIVGGGERLGTLILSRLESNFTDDDLLLAEYGGTVVGMEILHEKAE EIEEEARSRAVVQMAISSLSYSELEAIEHIFDELNGKEGLLVASKIADRVGITRSVIV NALRKLESAGVIDSRSLGMKGTFIRVLNDKFLVELEKLKNN" misc_feature 1304457..1305227 /gene="codY" /locus_tag="lmo1280" /note="GTP-sensing pleiotropic transcriptional regulator CodY [Transcription]; Region: CodY; COG4465" /db_xref="CDD:443562" regulatory 1305250..1305277 /regulatory_class="terminator" gene 1305390..1305758 /locus_tag="lmo1281" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985105" CDS 1305390..1305758 /locus_tag="lmo1281" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464806.1" /db_xref="GeneID:985105" /translation="MGVVYHNNYLVWMEIGRTRLIEKLGFRYFDMEEAGYLSPVLDVH IHYGKPLRYGQRAVVKTWIKGYDGLRVTYGYEICYEDTNEVAITGETQHVCVTKEDFR PVSLRRTFPNWHEAYLKALE" misc_feature 1305390..1305749 /locus_tag="lmo1281" /note="Acyl-CoA thioesterase FadM [Lipid transport and metabolism]; Region: FadM; COG0824" /db_xref="CDD:440586" gene 1305781..1306092 /locus_tag="lmo1282" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985101" CDS 1305781..1306092 /locus_tag="lmo1282" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464807.1" /db_xref="GeneID:985101" /translation="MAFGVKRDEMELWKEKAARGEIAIITHYWLDDRFPESKTVTKVA CVDLKKLQQWGKQYGLAPDWIDNRRKNFPHYDLFGEMQLVVLKKEKAFEQIERFHLEE K" regulatory 1306082..1306087 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1282" gene 1306095..1306967 /locus_tag="lmo1283" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985110" CDS 1306095..1306967 /locus_tag="lmo1283" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LacX protein" /protein_id="NP_464808.1" /db_xref="GeneID:985110" /translation="MIKLENEVLLVEMKTAGAELTRIFHKDTGLEYLWNADSKFWGRH SPVLFPTVGRLVEDTYLVDGKPYHLGQHGFARDRDFQVVEQTEKSVRFELDADEDSLA VYPYKFKLSIIYTIEKNTVAVSYEVENTDNKRIYFSIGAHPAFNLPLTDGTTFEDYYL DFGTEENLETLCLEGPYRSGEIKKVVDEAARYLPLNYDLFKNDALIFEALKQKEMTIK SDKTPHFVKVSFPEFPFVGVWTAKAGTPFLCIEPWYGIADGAGESVELRDKAGIEHLE PEAVFASEYEITVG" misc_feature 1306098..1306961 /locus_tag="lmo1283" /note="Aldose 1-epimerase, similar to Lactococcus lactis lacX; Region: Aldose_epim_lacX; cd09024" /db_xref="CDD:185701" misc_feature order(1306254..1306256,1306308..1306310,1306518..1306520, 1306524..1306526,1306704..1306706,1306809..1306811, 1306845..1306847) /locus_tag="lmo1283" /note="active site" /db_xref="CDD:185701" misc_feature order(1306518..1306520,1306845..1306847) /locus_tag="lmo1283" /note="catalytic residues [active]" /db_xref="CDD:185701" regulatory complement(1306965..1307003) /regulatory_class="terminator" regulatory 1306976..1307014 /regulatory_class="terminator" gene complement(1307009..1307605) /locus_tag="lmo1284" /db_xref="GeneID:986559" CDS complement(1307009..1307605) /locus_tag="lmo1284" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464809.1" /db_xref="GeneID:986559" /translation="MTINLILLSLLAYVIGSIPSGLWIGKIFYKKDIREFGSGNLGAT NSFRVLGIKAGSIVTVMDILKGTVATLLPFFFQLNVDHHFWLLTGAFAIIGHSFPLFA GFRGGKAVATSAGVILAYAPLLFVAALVVFLVTLKLSKYVSLSSMIGALAALIISLFM GDWILIVLVACIALFVIWRHRANITRIRNGEEPKIKWM" misc_feature complement(1307015..1307605) /locus_tag="lmo1284" /note="glycerol-3-phosphate 1-O-acyltransferase PlsY; Region: PRK00220" /db_xref="CDD:234691" regulatory complement(1307612..1307617) /regulatory_class="ribosome_binding_site" regulatory 1307746..1307751 /regulatory_class="ribosome_binding_site" gene 1307763..1308170 /locus_tag="lmo1285" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985138" CDS 1307763..1308170 /locus_tag="lmo1285" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464810.1" /db_xref="GeneID:985138" /translation="MQNPTKEEIQHILKKAKVIAVVGLSDKPDRTSYRVSQIMQQAGY KIIPVNPNADEILGEKTVKHLTDIEEHVDIVNVFRRSEFLPEIAEAFDQIDADVFWAQ LGIANQEAFDFLTEKGYPTVMDYCIKVAYQEMD" misc_feature 1307763..1308158 /locus_tag="lmo1285" /note="Predicted CoA-binding protein [General function prediction only]; Region: YccU; COG1832" /db_xref="CDD:441437" regulatory 1308194..1308226 /regulatory_class="terminator" regulatory 1308336..1308341 /regulatory_class="ribosome_binding_site" gene 1308351..1310318 /gene="parE" /locus_tag="lmo1286" /db_xref="GeneID:987287" CDS 1308351..1310318 /gene="parE" /locus_tag="lmo1286" /experiment="EXISTENCE:[PMID:19448609]" /note="decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling" /codon_start=1 /transl_table=11 /product="DNA topoisomerase IV subunit B" /protein_id="NP_464811.1" /db_xref="GeneID:987287" /translation="MNRNEYNDDSIQVLEGLEAVRKRPAMYIGSTDVRGLHHLVYEIV DNSVDETLAGFGKKIVVTLHEDGSVSVSDEGRGMPVGMHKTGKSTVEVILTVLHAGGK FGQEGGYKTSGGLHGVGSSVVNALSEWLVVTINRDGATYQQKFKDGGKPDGTLKKIGK SKATGTTIRFKPDPAIFPTTSFNYETLSERLRESAFLLKGMLIELIDERVGMAEAFHF EEGVKNFVEYINEGKDVLHPVASFEGENATIEVEMAFQFNDGYSENILSFVNNVRTRG AGSHESGMKAAMTRIFNDYARRVNLLKEKDKNLEGSDIREGLSAVLSIRVPEKILQFE GQTKEKLGTQEARQAVDAVVAEHLAYFLAENPETSSLLVKKAVKAREAREAARKAREE TRNGKKKKRSETLLSGKLTPAQSRNPNKNELYLVEGDSAGGSAKQGRDRRFQAILPLR GKVINTEKAKLQDILKNEEISTIIHTVGAGVGTEFDVEDCNYDKVVIMTDADTDGAHI QVLLLTFFYRYMRPLVEAGKVFIALPPLYKVSRGSGKKEVIEYAWTDEELDSAIQKIG KGYMIQRYKGLGEMNADQLWETTMNPDTRTLIRVRVDDSARAERRVATLMGDKVEPRR QWIEKHVEFSMEDSQNILENENMMVEEAKDI" misc_feature 1308360..1310258 /gene="parE" /locus_tag="lmo1286" /note="DNA gyrase/topoisomerase IV, subunit B [Replication, recombination and repair]; Region: GyrB; COG0187" /db_xref="CDD:439957" regulatory 1310299..1310304 /regulatory_class="ribosome_binding_site" /gene="parE" /locus_tag="lmo1286" gene 1310315..1312774 /gene="parC" /locus_tag="lmo1287" /db_xref="GeneID:985091" CDS 1310315..1312774 /gene="parC" /locus_tag="lmo1287" /experiment="EXISTENCE:[PMID:19448609]" /note="decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling" /codon_start=1 /transl_table=11 /product="DNA topoisomerase IV subunit A" /protein_id="NP_464812.1" /db_xref="GeneID:985091" /translation="MSNPEQHIQDLALEEVMGDRFGRYSKYIIQERALPDVRDGLKPV QRRILFAMNVEGNTAEKGFRKSAKTVGNVIGNYHPHGDSSVYEAMVRMSQDWKVRNML IEMHGNNGSVDGDPPAAMRYTEARLSPISAELLRDIEKETVDFIPNFDDTSSEPTVLP ARFPNLLVNGSTGISAGYATDIPPHNLTEIIEAVIKRLDNPLCTTDDIMKIVKGPDFP TGGIIQGIDGIRKAYQTGKGRVVVRSKTEIEDIRGGRKQITIHEIPYEVNKANLVKRM DELRIEKKIEGISEVRDETDRTGLRIAVELKKDANAEGVLNYLFKNTDLQVSYNFNMV AINKKRPELMGIIPMLDAYIEHQKEIITKRSEYDIRKARARQHILEGLIKALSILDEV IKLIRGSKDKRDAKLNLQTKYDFSEKQAEAIVSLQLYRLTNTDIHELQSEAKSLAEQI SVLEKILGDEAELIAVLKEELAEIKKKYKTARRTEVQAEIAEIKIDTEVLVANEDVIV SVTKEGYVKRTSQRSYAASNGAELAMKEADHAIFIQKMNSLDSLLLFTSKGNFIYRPV HELPDIRWKNLGDHVSHLASDLSAGEEIRSAIAIQAFTEEKRFLFVTKNGMTKQSAIT NYKPQRYSKSMMAIKLKGDDELLSVHLIDGTEDIFLATKNGYGLRYSITEIPESGART AGVKAINLKQDDIVIGGIVLMPNEQKHILLATQRGSLKQMKASEFEPISRAKRGLLML RELKSNPHRFIGITLADNNDHLFIETNTDQIVEIDVANLRITDRYSNGSFVLDETMEG EPTSIWLAIPEIKDTSDAKEE" misc_feature 1310315..1312726 /gene="parC" /locus_tag="lmo1287" /note="DNA gyrase/topoisomerase IV, subunit A [Replication, recombination and repair]; Region: GyrA; COG0188" /db_xref="CDD:439958" misc_feature 1311827..1311955 /gene="parC" /locus_tag="lmo1287" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature 1311962..1312117 /gene="parC" /locus_tag="lmo1287" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature 1312133..1312270 /gene="parC" /locus_tag="lmo1287" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature 1312280..1312429 /gene="parC" /locus_tag="lmo1287" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" misc_feature 1312436..1312585 /gene="parC" /locus_tag="lmo1287" /note="GyrA_CTD repeat [structural motif]; Region: GyrA_CTD repeat" /db_xref="CDD:293790" regulatory 1312785..1312825 /regulatory_class="terminator" regulatory 1312844..1312849 /regulatory_class="ribosome_binding_site" gene 1312857..1313324 /locus_tag="lmo1288" /db_xref="GeneID:987285" CDS 1312857..1313324 /locus_tag="lmo1288" /experiment="EXISTENCE:[PMID:19448609]" /note="S-ribosylhomocysteine lyase; catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2" /codon_start=1 /transl_table=11 /product="S-ribosylhomocysteinase" /protein_id="NP_464813.1" /db_xref="GeneID:987285" /translation="MAEKMNVESFNLDHTKVKAPFVRLAGTKVGVHGDEIYKYDVRFK QPNKEHMEMPALHSLEHLMAELARNHTDKLVDISPMGCQTGFYVSFINHSDYDDALEI IATTLTDVLVATEVPACNEVQCGWAASHSLEGAKALAEEFLAKRSEWKNVFGE" misc_feature 1312866..1313303 /locus_tag="lmo1288" /note="S-ribosylhomocysteine lyase LuxS, autoinducer biosynthesis [Signal transduction mechanisms]; Region: LuxS; COG1854" /db_xref="CDD:441459" regulatory 1313333..1313370 /regulatory_class="terminator" gene 1313654..1315435 /locus_tag="lmo1289" /db_xref="GeneID:987289" CDS 1313654..1315435 /locus_tag="lmo1289" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_464814.1" /db_xref="GeneID:987289" /translation="MMSIKSNIMKIGVCSVMVLVPLSQTSLPSFAAEEIALKESQDVV NIPDPQLKKELNLYLNQAENADITEAQMATFRNITLNSGIKDLTGIEYLKNITTLSIN NINASYEPIQTLSSLEKLVINGENVNADIIPDLSVLSNLTFLDLSRTNIDDTIFSKIS NIPNLNKLDISNNKGITKISELNNLPSLQELRVSDCQITNFKGIEKFPNLTAFYGDGQ LFGIDSFETDGFKNIKSSELTFDANAKTLFVPFSIVTVNTILNYDGLSLPYNTNPDYT SIALGDQSYVVTNDKISINQQGITLSDFTQADFDELEAFEVYLGFDSGNISKPANLAN GTYSLKQIGSYRAFSVDHSVNITAQDNISYIQNDTVTPEKFLTDIKADANGGTITSDL TDKVDFTKPGNYTVTLNAQNTKGLKGEPIQVTVTIIEKTVITADPEVTYDLNEAITEE EFLAEIKATTNDDTMITSDFESAVDFTKAGEYIVTLNAENDTQKAAPLTVKIRVNPKL PDPVVPIPYPDPTPDPTPDPTVPVPTPEDSTSDDGGVQHSNSRNPRISISDSSLEKLP KTGDSLPESGVLLGFLTLALGIVIRKK" misc_feature 1313657..1315432 /locus_tag="lmo1289" /note="class 1 internalin InlK; Region: internalin_K; NF033186" /db_xref="CDD:467984" misc_feature 1313810..1313920 /locus_tag="lmo1289" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1313921..1314001 /locus_tag="lmo1289" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1314002..1314073 /locus_tag="lmo1289" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1314074..1314145 /locus_tag="lmo1289" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1314146..1314214 /locus_tag="lmo1289" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1314281..1314355 /locus_tag="lmo1289" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275382" regulatory 1315440..1315467 /regulatory_class="terminator" gene 1315767..1317563 /locus_tag="lmo1290" /db_xref="GeneID:985114" CDS 1315767..1317563 /locus_tag="lmo1290" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_464815.1" /db_xref="GeneID:985114" /translation="MSVKSNIVKIGVCFAVLAVPVSQTTLPVFAAEQPGLKASQDNVN IPDSTFKAYLNGLLGQASTANITEAQMDSLTYITLANINVTDLTGIEYAHNIKDLTIN NIHATNYNQISGLSNLERLRIMGADVTSDKIPNLSGLTNLTLLDLSHSAHDDSILTKI NTLPKVTSIDLSYNGAITDIMPLKTMPELKSLNIQFDGVHDYRGIEDFPKLNTLLAYS QTIGGKKLINSDIKSSKLTYNAENQTLYVPFSLMTERTVNYDGYVPDFVKSTASSDTY FTMNEQQVNGNRLTITSDGLTVSDVSKTDFDNLEKMEYNARIDLSYQSYNTPEQFQNG GSYTISMPIYDHYFTVDHSLNITADSEKTYIENQLVTEATFLSDIHAKTDDGSTVTSD FADKVDFNTPGTYTVTLQSENNAGLKATPVQVNVTIKAKTTITADEKITYKVDTSKTE AAFLADIKATTNDGTAITSDFATVVDLSKPGKYVVTLNAENDLQKALPVQVMVIVEKE TPIPDPTPTPTPDPTPTPDPSPTPNPVINPNVNKPEVPSYKIPSLTVNEKKAKAEPSK EALPKTGDSLPVAGATVGFLLIGLSWFVSRKK" misc_feature 1315767..1317560 /locus_tag="lmo1290" /note="class 1 internalin InlK; Region: internalin_K; NF033186" /db_xref="CDD:467984" misc_feature 1316118..1316189 /locus_tag="lmo1290" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 1316190..1316261 /locus_tag="lmo1290" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 1316262..1316330 /locus_tag="lmo1290" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" regulatory complement(1317559..1317595) /regulatory_class="terminator" regulatory 1317570..1317606 /regulatory_class="terminator" gene complement(1317596..1319464) /locus_tag="lmo1291" /db_xref="GeneID:985119" CDS complement(1317596..1319464) /locus_tag="lmo1291" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acyltransferase" /protein_id="NP_464816.1" /db_xref="GeneID:985119" /translation="MKRTTRYSRKYVPSIDGLRALAVIAVIAYHLNFSWAKGGFIGVD IFFVLSGYLITNILLTQWEKNQSLQLKQFWIRRFRRLIPAVYVMIVVVVIYSVFFHPE ILKNLRGDAIASFFYVSNWWFIFHNVSYFDSFGLPSPLKNLWSLAIEEQFYLIWPAFL LVFLKWVKNPKLLLKIVIGLGLLSAVWMTILYVPGTDPSRVYYGTDTRAFDLLSGCAL AFVWPFNRLSPVVPRKSKAVLNIAGTISILCFILFTAFVSEYQPFLYRGGLLFVAILG VIMIATISHPASYLSKIFSFKPLRWIGTRSYGIYLWHYPIITLTTPVLEITQPNIWRA ILQVAATFIIAELSFRFIETPIRKNGFINYFKGFKDKNYFIWKNKPVGKWLSIAGVVA VLAIFTLGMSNVLSVNTNAEKQQTSVKTTTSTPDEKKDDKKEDKATKDKEADSNKASE QKETQKPDNKNKSAATPKTIITQTVAIGDSVMLDIEPYLKEAVPNITIDGLVGRQLRD AITTATGYKKFNSENSSVILELGTNGPFTEDQLNDLLDQFDKATIYLVNTRVPRGWQS DVNKSIANAASRPNVTVVDWYSRSSGQSQYFAPDGVHLTKAGAQAYVAMLTSVMNK" misc_feature complement(1318391..1319443) /locus_tag="lmo1291" /note="Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains [Cell wall/membrane/envelope biogenesis]; Region: OafA; COG1835" /db_xref="CDD:441440" misc_feature complement(1317605..1318048) /locus_tag="lmo1291" /note="yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely...; Region: SGNH_hydrolase_yrhL_like; cd01840" /db_xref="CDD:238878" misc_feature complement(order(1317656..1317658,1317665..1317667, 1317866..1317868,1317953..1317955,1318025..1318027)) /locus_tag="lmo1291" /note="catalytic triad [active]" /db_xref="CDD:238878" misc_feature complement(order(1317656..1317658,1317665..1317667, 1318025..1318027)) /locus_tag="lmo1291" /note="catalytic triad [active]" /db_xref="CDD:238878" misc_feature complement(order(1317866..1317868,1317953..1317955, 1318025..1318027)) /locus_tag="lmo1291" /note="oxyanion hole [active]" /db_xref="CDD:238878" regulatory complement(1319472..1319477) /regulatory_class="ribosome_binding_site" regulatory 1319664..1319668 /regulatory_class="ribosome_binding_site" gene 1319677..1320375 /locus_tag="lmo1292" /db_xref="GeneID:985112" CDS 1319677..1320375 /locus_tag="lmo1292" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycerophosphodiester phosphodiesterase" /protein_id="NP_464817.1" /db_xref="GeneID:985112" /translation="MTEIFAHRGSSGTHPENTLPAMKAAILSGADGIELDIHVLKSGE LIVMHDERVDRTTNGTGFLKDYTLSEVKKLVIGKRLFRKIRVPTLEEIFKLVSGTDMI LNIELKTDVFEYEGIEQKVLALADKFPEVKRMYSSFNPDTLIRLRDLNPTAKLALITH ENLDEVLPLHEKIQLDAVHPPVKAMKNPILKQIAARYWTVNKEETITHFIDANVKGMM TDFPERAAALRNNK" misc_feature 1319680..1320342 /locus_tag="lmo1292" /note="Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins; Region: GDPD_TtGDE_like; cd08563" /db_xref="CDD:176506" misc_feature order(1319695..1319697,1319776..1319778,1319782..1319784, 1319821..1319823,1319992..1319994,1320088..1320090, 1320148..1320150,1320268..1320270) /locus_tag="lmo1292" /note="active site" /db_xref="CDD:176506" misc_feature order(1319695..1319697,1319821..1319823) /locus_tag="lmo1292" /note="catalytic site [active]" /db_xref="CDD:176506" misc_feature order(1319776..1319778,1319782..1319784,1319821..1319823, 1319992..1319994) /locus_tag="lmo1292" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:176506" misc_feature order(1320004..1320009,1320088..1320090,1320094..1320099, 1320106..1320108,1320157..1320168,1320178..1320183, 1320190..1320195,1320226..1320228) /locus_tag="lmo1292" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:176506" regulatory 1320361..1320414 /regulatory_class="terminator" regulatory 1320594..1320599 /regulatory_class="ribosome_binding_site" gene 1320608..1322284 /gene="glpD" /locus_tag="lmo1293" /db_xref="GeneID:985350" CDS 1320608..1322284 /gene="glpD" /locus_tag="lmo1293" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate dehydrogenase" /protein_id="NP_464818.1" /db_xref="GeneID:985350" /translation="MVQLFSAFDRETIERNLQEEKFDLVIVGGGITGAGIALDATSRG MSVALVEMGDFASGTSSRSTKLVHGGLRYLQQFEIKEVADLGKERAIVYENGPHVTTP EWMMLPFHKGGNMGKTTASFGIRLYDYLAGVKKNERRKILSAKETLAKNPFVKKDGLK GSGYYVEYRTDDARLTIEVMKKAVELGANAINYTKAEHFLYDDNKQVVGVTVTDRLSG KAYDIKGHRVINAAGPWVDKVRKLDYATNNKHLRLTKGIHLVIDKQKFPMEQAVYFDT PDGRMVFAIPRDKKVYVGTTDTVYDEAVINPKALESDHNYVIKAINYMFPDVHITEKD IESSWAGVRPLIYEEGKDPSEISRKDEVWFSESGLITMAGGKLTGYRKMAEKLLDDVS KTLAKETGKKYKTVQTKHLPISGGDIGGSEQLEAFLSKKAKEGNNRFGWTLEEGREMA KRFGSNIDQLFTYAQEHKEQNETTLPNSLYAELRYSIQHEAVTTPIDFLLRRTGYLLF DMPYLLEWKDAVVDEMAKQFHWSDDVKQTYIEELNIQINDAREPADWHDR" misc_feature 1320719..1322254 /gene="glpD" /locus_tag="lmo1293" /note="Glycerol-3-phosphate dehydrogenase [Energy production and conversion]; Region: GlpA; COG0578" /db_xref="CDD:440343" regulatory 1322301..1322335 /regulatory_class="terminator" regulatory 1322397..1322402 /regulatory_class="ribosome_binding_site" gene 1322410..1323327 /gene="miaA" /locus_tag="lmo1294" /db_xref="GeneID:985128" CDS 1322410..1323327 /gene="miaA" /locus_tag="lmo1294" /experiment="EXISTENCE:[PMID:19448609]" /note="IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity" /codon_start=1 /transl_table=11 /product="tRNA delta(2)-isopentenylpyrophosphate transferase" /protein_id="NP_464819.1" /db_xref="GeneID:985128" /translation="MSKIPVIVIVGPTAVGKTSLSIELAKKLDGEIISGDSMQVYRGL DIGTAKITPEEMDEIKHYLIDVTDPSEPFTAAKFQTETRKWIETIHQAGKLPIIVGGT GLYIQSVFYDYDFGNVSEDKAYRAELEQLNKTLLWQMLEQQDPESAAQIHENNKRRVI RALEVMHLTGKPFSEYQVHNVLNDTYKPLFLGLDLDRALLYERINQRVNLMFEEGLVT EAKKLYDQHLVDVPAVCGIGYKELFPYFEGKSSLEEAKELIQKNSRHFAKRQLTWFRN RMEIDWIQAGVSTTEAEALNKAETFLSVK" misc_feature 1322416..1323318 /gene="miaA" /locus_tag="lmo1294" /note="tRNA A37 N6-isopentenylltransferase MiaA [Translation, ribosomal structure and biogenesis]; Region: MiaA; COG0324" /db_xref="CDD:440093" regulatory 1323438..1323443 /regulatory_class="ribosome_binding_site" gene 1323450..1323683 /locus_tag="lmo1295" /db_xref="GeneID:985120" CDS 1323450..1323683 /locus_tag="lmo1295" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="host factor-1 protein" /protein_id="NP_464820.1" /db_xref="GeneID:985120" /translation="MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFT VLLDVEGKQQLVFKHAISTFSPQKNVALNPDAE" misc_feature 1323471..1323659 /locus_tag="lmo1295" /note="Hfq protein; Region: Hfq; pfam17209" /db_xref="CDD:435788" regulatory 1323699..1323745 /regulatory_class="terminator" regulatory 1323780..1323785 /regulatory_class="ribosome_binding_site" gene 1323794..1325017 /locus_tag="lmo1296" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985125" CDS 1323794..1325017 /locus_tag="lmo1296" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464821.1" /db_xref="GeneID:985125" /translation="MEREKIILVGVFLPNKTEEAFWNSMKELHSLAKTANAEVMDELI QKLERVNQASFIGSGKLDELAALVEMHEADVVIFNSELSATQVRNISAAVEARIIDRT QLILDIFAMCAKSREGKLQVAYAQYKYLLPRLSGQGISLSKLGGGIGSRGPGESKLEM DKRHIREKMHDIKAQLTHVEQHRKRIIERRNTQSVFRFGLIGYTNAGKSTIFNRLTNE TTLQENKLFATLDPTTRKVRFSGGFQTLLTDTVGFIQDLPTTLIAAFRSTLEETANVD VLIHVVDASNPDYLQHETTVISLLEELEMNHLPTLVIYNKMDHAPATFVPDQPESLLI SALDQEAPDTIKQRMIQLIEKNWAFFTIELSEEKGKELAQIKQQAWVTKLEYIESKQS YHIEGYKPRKELNNE" misc_feature 1323797..1324990 /locus_tag="lmo1296" /note="50S ribosomal subunit-associated GTPase HflX [Translation, ribosomal structure and biogenesis]; Region: HflX; COG2262" /db_xref="CDD:441863" regulatory 1324998..1325003 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1296" gene 1325010..1326236 /locus_tag="lmo1297" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985127" CDS 1325010..1326236 /locus_tag="lmo1297" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aluminum resistance protein" /protein_id="NP_464822.1" /db_xref="GeneID:985127" /translation="MNNIQAMRKKVEVQIADLQNETDEIAEFNQAKVLDAFQENKVSD FHFHPSTGYGYDDEGRDTLEHVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDE LLYITGQPYDTLEEIVGMRNQGQGSLKDFHIGYSSVPLLENGDVDFPLIAEKMTRKTK MIGIQRSRGYADRPSFTIDKIKEMIIFVKNINPEVIVFVDNCYGEFAEYLEPTEVGAD IIAGSLIKNPGGGLAKTGGYIAGKEALIDLCGYRLTTPGIGREAGASLYSLLEMYQGF FLAPHVTAQAIKGARFTAAMLAEFGVVADPTWDAPRTDLIQSISFHNKEKMVAFAQAI QAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLT YEHVKIAVTRAIQKTL" misc_feature 1325016..1326233 /locus_tag="lmo1297" /note="Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism, General function prediction only]; Region: YnbB; COG4100" /db_xref="CDD:443276" regulatory 1326279..1326310 /regulatory_class="terminator" regulatory 1326427..1326432 /regulatory_class="ribosome_binding_site" gene 1326440..1326808 /gene="glnR" /locus_tag="lmo1298" /db_xref="GeneID:985126" CDS 1326440..1326808 /gene="glnR" /locus_tag="lmo1298" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glutamine synthetase repressor" /protein_id="NP_464823.1" /db_xref="GeneID:985126" /translation="MSEKEIRRSMPLFPIGPVMKLTDLTARQIRYYEDQGLIHPARNQ GNHRLYSLQDIDVLLEIKDYLNDGLNIAGIKKMYQMQQKESKEPLTDDDVRKILRKEM QQAGRFVKQDATGKQQLPRF" misc_feature 1326473..1326751 /gene="glnR" /locus_tag="lmo1298" /note="Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators; Region: HTH_GlnR-like; cd01105" /db_xref="CDD:133380" misc_feature order(1326479..1326487,1326527..1326529,1326578..1326580, 1326581..1326583) /gene="glnR" /locus_tag="lmo1298" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133380" misc_feature order(1326617..1326619,1326626..1326628,1326638..1326643, 1326668..1326670,1326677..1326679,1326710..1326712, 1326728..1326730,1326740..1326742,1326749..1326751) /gene="glnR" /locus_tag="lmo1298" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:133380" regulatory 1326863..1326868 /regulatory_class="ribosome_binding_site" gene 1326879..1328213 /gene="glnA" /locus_tag="lmo1299" /db_xref="GeneID:985115" CDS 1326879..1328213 /gene="glnA" /locus_tag="lmo1299" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glutamine synthetase" /protein_id="NP_464824.1" /db_xref="GeneID:985115" /translation="MAKYTKEDIFRFADEQNVKFIRLQFTDILGIIKNVEIPVSQLKK ALDNKIMFDGSSIEGFVRIEESDMYLFPDLDTWVVFPWTAEKGKVARMICDIYNPDMT PFAGDPRANLKRVLKEMEELGFTEFNLGPEPEFFLFKLDENRRPTLELNDSGGYFDLA PTDLGENCRRDIVLELEEMGFEIEASHHEVAPGQHEIDFKYEDAVTACDSIQTFKLVV KTIARKHGLHATFMPKPLFGVNGSGMHFNMSLFNEKGNAFFDESGELELSQTAYHFLA GMLKHARGYTAVTNPTINSFKRLVPGYEAPCYIAWSGKNRSPLVRVPSSRGLSTRLEL RSVDPSANPYLAMAVLLKAGLSGIKDELTPPAPVDRNIYGMNEEEREATGIYDLPESL GHALIELEKDDIIKAGLGEHIFEHFIEAKTIECDMFRTAVHPWEREQYLEIY" misc_feature 1326879..1328204 /gene="glnA" /locus_tag="lmo1299" /note="Glutamine synthetase [Amino acid transport and metabolism]; Region: GlnA; COG0174" /db_xref="CDD:439944" regulatory 1328223..1328260 /regulatory_class="terminator" regulatory 1328346..1328351 /regulatory_class="ribosome_binding_site" gene 1328357..1329652 /locus_tag="lmo1300" /db_xref="GeneID:985130" CDS 1328357..1329652 /locus_tag="lmo1300" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="arsenic transporter" /protein_id="NP_464825.1" /db_xref="GeneID:985130" /translation="MQITLAILVFVLTLFFVIWQPRKLSIGWSACGGALIALLLGVVT LADVMTVTGIVWNATLAFIAIIIISLILDEIGFFEWAALHMARLARGNGLLMFILISI LGALVAALFANDGAALILTPIVLAMVRALDFDEKKVFPFIIASGFIADTTSLPLVVSN LVNIVSADFFGISFSRYALIMWIPTIFSLVASIIILYIYFRKALPRKYDVNAIQKPAS ALKDRKMFHISWGILTILVVGYFLSSFLDIPVSFIALLVALIFLLVGAKSHSVSTKAI LKGAPWSIVFFSVGMYVVVYGLQNVGITKLLSEAITYVAHFGLFAGTIGMGFIAAILS SVMNNLPTVMINALAIDHTSFTGVMKEALVYANVIGSDLGPKITPIGSLATLLWLHVL AQKGIKISWASYFKIGIVITIPVLFITLVGLYVSLLIWN" misc_feature 1328369..1329646 /locus_tag="lmo1300" /note="arsenical efflux pump membrane protein ArsB; Region: PRK15445" /db_xref="CDD:185342" misc_feature order(1328402..1328413,1328432..1328473,1328522..1328575, 1328645..1328695,1328699..1328752,1328771..1328842, 1328906..1328950,1329038..1329076,1329107..1329151, 1329194..1329250,1329320..1329367,1329446..1329505, 1329581..1329619) /locus_tag="lmo1300" /note="transmembrane helices; other site" /db_xref="CDD:238538" regulatory complement(1329646..1329690) /regulatory_class="terminator" regulatory 1329657..1329701 /regulatory_class="terminator" gene complement(1329696..1330217) /locus_tag="lmo1301" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985134" CDS complement(1329696..1330217) /locus_tag="lmo1301" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464826.1" /db_xref="GeneID:985134" /translation="MIYFETERLIARDYLERDYLPFSQMNADEEVMKYFPARLTQVES NALLDRNQKELTSLGYGLFAIEVKSTNEFIGFTGLHEATFEAEFTPCIEIGWRLKRSA WNQGFATEAALGVLAFAKGITAINEIYSFTATCNKPSEKVMRKIHLTKIADFEHPALI NGNPLKPHVLYKA" misc_feature complement(1329705..1330208) /locus_tag="lmo1301" /note="Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: RimL; COG1670" /db_xref="CDD:441276" regulatory complement(1330226..1330231) /regulatory_class="ribosome_binding_site" gene complement(1330247..1330861) /locus_tag="lmo1302" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985139" CDS complement(1330247..1330861) /locus_tag="lmo1302" /EC_number="3.4.21.88" /experiment="EXISTENCE:[PMID:19448609]" /note="Represses a number of genes involved in the response to DNA damage" /codon_start=1 /transl_table=11 /product="LexA family transcriptional regulator" /protein_id="NP_464827.1" /db_xref="GeneID:985139" /translation="MKISKRQQDIYEFIKSEVKEKGYPPSVREIGEAVGLASSSTVHG HLARLEGKGLIRRDPTKPRAIEILSLEDEAETPNVVNIPIIGKVTAGMPITAIENIDE YFPLPEYMAAGETNVFMLEIDGESMINAGILDGDKVIVRQESSAINGEIVVAMTDENE ATCKRFYKEANHFRLQPENDALEPILLNNVTILGKVIGLYRDIR" misc_feature complement(1330253..1330861) /locus_tag="lmo1302" /note="SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase) [Transcription, Signal transduction mechanisms]; Region: LexA; COG1974" /db_xref="CDD:441577" regulatory complement(1330869..1330874) /regulatory_class="ribosome_binding_site" regulatory 1331004..1331009 /regulatory_class="ribosome_binding_site" gene 1331018..1331347 /locus_tag="lmo1303" /db_xref="GeneID:987680" CDS 1331018..1331347 /locus_tag="lmo1303" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division suppressor" /protein_id="NP_464828.1" /db_xref="GeneID:987680" /translation="MTLKLIWDKFYVSIIFVLTCIVLGIILMCTVVGGGSDYSEVNVN EGDSLWALADQYAGKSDMAKADFVSWVEKENNLSDGHVEAGDSVVIPVHKTKLLKSDS TIQLANQ" misc_feature 1331024..1331341 /locus_tag="lmo1303" /note="cell division suppressor protein YneA; Provisional; Region: PRK14125" /db_xref="CDD:184523" regulatory 1331427..1331432 /regulatory_class="ribosome_binding_site" gene 1331439..1331666 /locus_tag="lmo1304" /db_xref="GeneID:987682" CDS 1331439..1331666 /locus_tag="lmo1304" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464829.1" /db_xref="GeneID:987682" /translation="MLEKAKIDRINELSKKKKAGTLTSAEKVEQDKLRKEYIKSFRTH MKGTIENTTIIDPNGKDVTPHKVKQLRKNKY" misc_feature 1331439..1331660 /locus_tag="lmo1304" /note="Uncharacterized conserved protein YnzC, UPF0291/DUF896 family [Function unknown]; Region: YnzC; COG4224" /db_xref="CDD:443368" regulatory 1331798..1331803 /regulatory_class="ribosome_binding_site" gene 1331813..1333807 /gene="tkt" /locus_tag="lmo1305" /db_xref="GeneID:987681" CDS 1331813..1333807 /gene="tkt" /locus_tag="lmo1305" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transketolase" /protein_id="NP_464830.1" /db_xref="GeneID:987681" /translation="MFDNTDSLAVNTIRTLSMDAIQKANSGHPGLPMGAAPMAYALWS RVLNTNPKNSHWFNRDRFVLSAGHGSMLLYSLLHLSGFKLELEDLKNFRQWESKTPGH PEYRYTDGVDATTGPLGQGIAMAVGMAMAERHLEAKYNKDGFPVVDHYTYALCGDGDL MEGVASEAASYAGHQQLGRLVVLYDSNDISLDGDLDKSFSENVKQRFEAYGWEHLLVK DGNDTAEILAAIEKAKQNTSQPTMIEVKTVIGFGAPNAGTSKVHGAPLGDEGILEAKK AYGWNYEEKFFVPEEVTARFKETIGERGEKAEKAWNELFASYKAEYPELAKQLEDSLN NKLPADWDADLPVYDDSKALASRASSGEVINALAGKIPTIFGGSADLAGSNNTTIKTD GEFTKATPAERNIWFGVREFAMGAALNGMALHGGLQVYGGTFFVFSDYVRAAIRLSAI QHLPVTYVMTHDSIAVGEDGPTHEPVEQLASLRAMPGLSVIRPADGNEVVEAWKLAIT STSTPHVLVLTRQGLPTLPNSAKLTAEGVKKGAYVISPAKGEVPEAIILASGSEVNLA IEAQKELQAQGTDVSVVSVPSFDLFEQQSAEYKESVLPNAVRKRIAVEMGASFGWERY VGLDGKVIGIDKFGASAPGETVIKNYGFTVENVVNTVKSL" misc_feature 1331819..1333804 /gene="tkt" /locus_tag="lmo1305" /note="Transketolase [Carbohydrate transport and metabolism]; Region: TktA; COG0021" /db_xref="CDD:439792" regulatory 1333817..1333848 /regulatory_class="terminator" regulatory 1334013..1334018 /regulatory_class="ribosome_binding_site" gene 1334028..1334267 /locus_tag="lmo1306" /db_xref="GeneID:987683" CDS 1334028..1334267 /locus_tag="lmo1306" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464831.1" /db_xref="GeneID:987683" /translation="MWIYILVGIICLLAGLAGGFFIARRYMMSYLKNNPPINEQMLQM MMAQMGQKPSQKKINQMMSAMNKQQEKEKPKKAKK" misc_feature 1334028..1334225 /locus_tag="lmo1306" /note="Uncharacterized conserved protein YneF, UPF0154 family [Function unknown]; Region: YneF; COG3763" /db_xref="CDD:442977" regulatory complement(1334283..1334329) /regulatory_class="terminator" regulatory 1334286..1334337 /regulatory_class="terminator" gene complement(1334318..1335160) /locus_tag="lmo1307" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987685" CDS complement(1334318..1335160) /locus_tag="lmo1307" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1307" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464832.1" /db_xref="GeneID:987685" /translation="MHNPNLFNTLKQNEYTLPKDPNTSNEIIDTMLSYLSSTDSELRD NIAYNIFSEWLVVQDNLTTEQKMRIYNYAVNKNNLLFKINIIDSDAVFQRSFLALIIA LLLENNKVHNFLTDSEIRETLNLLIELLKNEKNTHSFIEEKGWAHCIAHTADALDELI YQRTISEIDVKKIMTTIAFFYKTNTKMLTGEEDERLSNILITALFEQKISNEEVKNWL ISISETIPSYLPEIPLINIKQFTQTLLIKLTVLNYDVDFSLFPIVTRYIRKNDDNSTN KKAL" misc_feature complement(1334423..1334926) /locus_tag="lmo1307" /note="Protein of unknown function (DUF2785); Region: DUF2785; pfam10978" /db_xref="CDD:431573" regulatory complement(1335165..1335170) /regulatory_class="ribosome_binding_site" gene complement(1335179..1335910) /locus_tag="lmo1308" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987687" CDS complement(1335179..1335910) /locus_tag="lmo1308" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464833.1" /db_xref="GeneID:987687" /translation="MKENKYDDKHFFEQYSQMPRSKEGLQAAGEWHEFKKLLPDFHQK VVLDLGCGFGWHCIYAAEQGAKKVVGVDLSARMLTEAKHKTTSPIVHYERRAMENIDI EPETYDIVLSSLALHYVASFNDICQKVNTNLITGGSFVFSVEHPIFTADGRQDWFTDE AGNKLHWPVDRYFNESIRTSHFLGEDVQKYHRTLTTYIQTLLKNGFQINSIIEPEPAP ELKDLPEMQDEYRRPMMLIISATKN" misc_feature complement(1335482..>1335775) /locus_tag="lmo1308" /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase [Coenzyme transport and metabolism]; Region: UbiG; COG2227" /db_xref="CDD:441829" regulatory complement(1335918..1335923) /regulatory_class="ribosome_binding_site" gene complement(1335932..1336438) /locus_tag="lmo1309" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987686" CDS complement(1335932..1336438) /locus_tag="lmo1309" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464834.1" /db_xref="GeneID:987686" /translation="MNYKSPVYSVTPIHYTKLQANNYNPNTVPATELKLLEKSIWEDG FTQPIVCYPLEDSDKYEIIDGFHRYTIMITSKRIRERENEFLPVVILEKDTVNRMAST IRHNRARGFHNVELMSNIVSELVDSGMSDSWIMKNIGMDANEILRLKQVSGLAHLFLD KEFSHTSD" misc_feature complement(1336121..1336423) /locus_tag="lmo1309" /note="immunoglobulin-binding regulator IbrB activates eib genes; Region: IbrB_like; cd16397" /db_xref="CDD:319255" regulatory complement(1336446..1336451) /regulatory_class="ribosome_binding_site" gene complement(1336448..1337752) /locus_tag="lmo1310" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987688" CDS complement(1336448..1337752) /locus_tag="lmo1310" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464835.1" /db_xref="GeneID:987688" /translation="MLSRTVFDASQERMEVIFSEFDNIIVSFSGGKDSAVMLHLMIDY IRKNNIRKKIYVYHLDYEGQYSATTDFVTEMLTTNLDIIEPLWCCLPIAAQSAVSMFT DHWKPWEKSKRNIWVRDMPTFPHVINEDNAPFDFDFENLWDYEFNKKIIHWLHTKNNA KKTIALIGIRQQESLNRYNAIHKKERMYKTYNWTTEISKNIYNAYPIHDWQVEDIWVA NAKFNWSYNKIYDLFYHAGLTVHDMRVASPFNDAATESLKLYRVIEPALWSKLVGRVN GANFTAIYGGTSAMAWKEIKLPKNHTWKSYLEFLLTTLPSYTRERYLKKFKTSITYWT EKGGALKVETVEELKNLEIQADFLGKPQNNRVYTNPMEIVRFKEYPDDLKIKEFASVP TYKRMCIAILKNDYTCKYMGFGQTKLELEKRKNALEKYNNIL" misc_feature complement(1336451..1337752) /locus_tag="lmo1310" /note="Predicted phosphoadenosine phosphosulfate sulfurtransferase, contains C-terminal DUF3440 domain [General function prediction only]; Region: YbdN; COG3969" /db_xref="CDD:443169" gene complement(1337742..1338947) /locus_tag="lmo1311" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987689" CDS complement(1337742..1338947) /locus_tag="lmo1311" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1311" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464836.1" /db_xref="GeneID:987689" /translation="MKMTLLDNQKKAFIKLKKYKVGALFMKPGSGKTRVACELINDAK PDYVLWITPFQTKENLEIEINKWGYKFPQEIIGIESLSNSDRLYLYCRNKLKNSTNSY IIMDESLKIKNIHALRTQRAIKLSRLATYKLIMNGTPLSRNILDLWSQLEFLSPKILN LSFSQFKKTFCEYVTITQLTQSTQQSMDIIKKYHNLEYLYKLITPFIFTSSHELAVKW HYIRHDFSIDEELLKQYYEIKEDYLQKAAAYTININFLEMSQVMQHCYCLSSEKFTIT ESLIAGKEETTIIFCKYRRSEEALQQAFPNVKITTFAKSSYGLNLQFYNQIIYFDKTF DYSQRDQSERRIYRTGQTQDCYYHDLSGNVGLDSLIDTNISKKTSLLQEFKKELSQKN SFEVIMDAF" misc_feature complement(1337874..>1338947) /locus_tag="lmo1311" /note="Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination, and repair]; Region: HepA; COG0553" /db_xref="CDD:440319" regulatory complement(1337762..1337767) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1311" gene complement(1338925..1339299) /locus_tag="lmo1312" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987691" CDS complement(1338925..1339299) /locus_tag="lmo1312" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1312" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464837.1" /db_xref="GeneID:987691" /translation="MVKWHKIYTYSERVEQWDNQTIIEMPSESEYEGYFFLLPKKMVF SLTPQYSYFYFPDTWNFFLKKHTEKKELSVSKMILCFKKESDEIMQFFHTKKVNDSIV KVRTHIPKKIEKDVIIENDLIR" regulatory 1339581..1339586 /regulatory_class="ribosome_binding_site" gene 1339592..1340320 /gene="pyrH" /locus_tag="lmo1313" /db_xref="GeneID:987690" CDS 1339592..1340320 /gene="pyrH" /locus_tag="lmo1313" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the phosphorylation of UMP to UDP" /codon_start=1 /transl_table=11 /product="uridylate kinase" /protein_id="NP_464838.1" /db_xref="GeneID:987690" /translation="MDTPDYKRVVLKLSGEALAGNDGFGINPSVVNLISAQIKEVVEL GVEVAIVVGGGNIWRGKLGSEMGMDRAAADQMGMLATIMNSLSLQDSLENIGVATRVQ TSIDMRQIAEPYIRRKAIRHLEKGRVVIFAGGTGNPYFSTDTAAALRAAEIEADVILM AKNNVDGVYNADPKLDENAKKYEELSYLDVIKEGLEVMDTTASSLSMDNDIPLIVFSF TEQGNNIKRVILGEKIGTTVRGKK" misc_feature 1339592..1340311 /gene="pyrH" /locus_tag="lmo1313" /note="Uridylate kinase [Nucleotide transport and metabolism]; Region: PyrH; COG0528" /db_xref="CDD:440294" regulatory 1340306..1340311 /regulatory_class="ribosome_binding_site" /gene="pyrH" /locus_tag="lmo1313" gene 1340320..1340877 /gene="frr" /locus_tag="lmo1314" /db_xref="GeneID:987693" CDS 1340320..1340877 /gene="frr" /locus_tag="lmo1314" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ribosome recycling factor" /protein_id="NP_464839.1" /db_xref="GeneID:987693" /translation="MSKEVLSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDY YGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSI PQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLRSYGEDV QKLTDESIKNIDSITKDKEAEILEV" misc_feature 1340320..1340874 /gene="frr" /locus_tag="lmo1314" /note="Ribosome recycling factor [Translation, ribosomal structure and biogenesis]; Region: Frr; COG0233" /db_xref="CDD:440003" misc_feature order(1340404..1340415,1340623..1340634) /gene="frr" /locus_tag="lmo1314" /note="hinge region; other site" /db_xref="CDD:238288" regulatory 1341094..1341099 /regulatory_class="ribosome_binding_site" gene 1341107..1341865 /locus_tag="lmo1315" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987694" CDS 1341107..1341865 /locus_tag="lmo1315" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate" /codon_start=1 /transl_table=11 /product="UDP pyrophosphate synthase" /protein_id="NP_464840.1" /db_xref="GeneID:987694" /translation="MFKKLFRQDENILNSELAEDLPIPRHVAIIMDGNGRWAKKRFLP RIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKRPTDEVDFLMKLPVEFFDSF VPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGLTLNFALNYGGRSEIITA AKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNFMLWQLAYS EFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL" misc_feature 1341107..1341862 /locus_tag="lmo1315" /note="undecaprenyl pyrophosphate synthase; Provisional; Region: PRK14830" /db_xref="CDD:184840" misc_feature order(1341197..1341214,1341239..1341241,1341251..1341253, 1341263..1341265,1341272..1341274,1341329..1341331, 1341353..1341355,1341365..1341367,1341386..1341391, 1341398..1341400,1341545..1341547,1341704..1341706, 1341722..1341724,1341728..1341730) /locus_tag="lmo1315" /note="active site" /db_xref="CDD:259850" misc_feature order(1341566..1341571,1341575..1341580,1341587..1341592, 1341638..1341646,1341653..1341655,1341686..1341688, 1341719..1341733,1341740..1341748,1341752..1341766, 1341770..1341772) /locus_tag="lmo1315" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:259850" regulatory 1341865..1341870 /regulatory_class="ribosome_binding_site" gene 1341879..1342667 /gene="cdsA" /locus_tag="lmo1316" /db_xref="GeneID:987695" CDS 1341879..1342667 /gene="cdsA" /locus_tag="lmo1316" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphatidate cytidylyltransferase" /protein_id="NP_464841.1" /db_xref="GeneID:987695" /translation="MKTRIITAVVALIFFIPFVVYGGIPFELLSILLATIALYEVLVM TKQRIFSMNGIITLLLMWLVVVPDRYLDFLDTLHITEMEVIFILMALLLANTVFSRNK FHFDQVGICMVAAFYTGFGFHYLALTREAGLMYVLFALFIVWSTDTGAYFIGKAIGKH KLAPNVSPNKTVEGFIGGIVCALVIAGGFYYFAELPGNIAFVLALLVFLSIFGQLGDL VESALKRFYGVKDSGKILPGHGGILDRFDSLLFVLPLLHILQII" misc_feature 1341879..1342664 /gene="cdsA" /locus_tag="lmo1316" /note="CDP-diglyceride synthetase [Lipid transport and metabolism]; Region: CdsA; COG0575" /db_xref="CDD:440340" regulatory 1342669..1342674 /regulatory_class="ribosome_binding_site" gene 1342682..1343824 /locus_tag="lmo1317" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987697" CDS 1342682..1343824 /locus_tag="lmo1317" /EC_number="1.1.1.267" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate" /codon_start=1 /transl_table=11 /product="1-deoxy-D-xylulose 5-phosphate reductoisomerase" /protein_id="NP_464842.1" /db_xref="GeneID:987697" /translation="MKKIILLGATGSIGTQTLAIIRENPEKFQVVALSFGRNMERGRA IIKEFKPKMVAVWHTRDRVTLEAEFPNVKFFNGLEGLREVATYLDGDVLLNAVMGSVG LLPTLDAIEAGKAIAIANKETLVTAGHLVMRAAKEKNISLLPVDSEHSAILQALNGEN TERIEKIILTASGGSFRDKTREQLSAVTVKEALKHPNWNMGNKLTIDSATMFNKGLEV MEAHWLFGVDYDDIEVVIQRESIIHSMVQFVDGSFIAQLGTPDMRMPIQYALTYPDRL YIPYEKEFRITDFSALHFEKVDYERFPALKLAYNAGKIGGTMPTVLNAANEIAVAGFL NGQVAFYNIEALVENAMNRHTSISNPDLDTILQVDQETRAYVKTLL" misc_feature 1342682..1343821 /locus_tag="lmo1317" /note="1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid transport and metabolism]; Region: Dxr; COG0743" /db_xref="CDD:440506" regulatory 1343825..1343830 /regulatory_class="ribosome_binding_site" gene 1343838..1345100 /locus_tag="lmo1318" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987698" CDS 1343838..1345100 /locus_tag="lmo1318" /experiment="EXISTENCE:[PMID:19448609]" /note="zinc metalloprotease Lmo1318" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464843.1" /db_xref="GeneID:987698" /translation="MTTIIAFIFVFGLIVFFHELGHFLFAKRAGIMVKDFSIGFGPKI FAYRKKETQYTIRLLPIGGYVRMAGEDGEEIELKPGYRVGLELTPEETVSKIIVNGKD QYVNAQPIEVSLCDLEKELFIEGYEDYDDTKKVRYQVERDALVIDGKIETMITPYDRS FNAKSLGNRAMTIFAGPLFNFILAILIFTALAFVQGGVPSTDNTLGNVLPDGAAAEAG LKKGDEVLSINGKETKSWTDIVQNVSENPGKTLDFKIERDGKTQDIDVKPATQKENGK DVGKIGVETPMDSSFTAKITNGFTQTWNWIVQIFTILGNMFTGGFSLDMLNGPVGIYT STQQVVQYGFMTVLNWTAVLSINLGIVNLLPLPALDGGRLMFFLYELVRGKPIDPKKE GIIHFAGFALLMVLMILVTWNDIQRAFF" misc_feature 1343838..1345094 /locus_tag="lmo1318" /note="Membrane-associated protease RseP, regulator of RpoE activity [Posttranslational modification, protein turnover, chaperones, Transcription]; Region: RseP; COG0750" /db_xref="CDD:440513" regulatory 1345126..1345131 /regulatory_class="ribosome_binding_site" gene 1345140..1346846 /gene="proS" /locus_tag="lmo1319" /db_xref="GeneID:987699" CDS 1345140..1346846 /gene="proS" /locus_tag="lmo1319" /EC_number="6.1.1.15" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)" /codon_start=1 /transl_table=11 /product="prolyl-tRNA synthetase" /protein_id="NP_464844.1" /db_xref="GeneID:987699" /translation="MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLP LATLMLRKIETIIREELEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASR DFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDA YSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGE DTIAYSDASDYAANTEMAPVLYMEKKSHELEKDLEKVATPDQKSITDIVGFLEVPIEK TMKSMLYQVDDEVIMVLVRGDHEVNDIKIKNALDATNVELVDPAVAVELLGANFGSLG PINVPENMRVFADNAVKDIVNAVVGANEDGFHYINVNPDRDFSVTSYFDLRMIQVGDL SPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILS AIAEQSNDENGFVWDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFSVLIDDR AERAGVKFADADLIGLPIRITVGKKAAEGVVEVKIRKTGEMIEVRQDELLNTLPILFG DK" misc_feature 1345140..1346822 /gene="proS" /locus_tag="lmo1319" /note="prolyl-tRNA synthetase; Provisional; Region: PRK09194" /db_xref="CDD:236405" regulatory 1346934..1346939 /regulatory_class="ribosome_binding_site" gene 1346951..1351285 /gene="polC" /locus_tag="lmo1320" /db_xref="GeneID:987700" CDS 1346951..1351285 /gene="polC" /locus_tag="lmo1320" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity" /codon_start=1 /transl_table=11 /product="DNA polymerase III PolC" /protein_id="NP_464845.1" /db_xref="GeneID:987700" /translation="MTAKEEEKQERFQLLMTQIGLQDVTTYEEFTKDAKIEKLVADKK NKTWQFHLHVPQIFPAALFHMMDVGMKRAFSQIAETEMQIVPENQTINETLIQDYWNL IVEPIGKQSPMIGKLLMEQKPTFKEPHFIEVAVHNDMEEATIQQRFQTKIIESYGKAG FPRLAMKMHMLDQSETDEYKAFAQAKQEEDQKKAAEAVQVMQKRQAEGQSGGGGAAPL TGPFQIGYKIKDDEEVKRLGDIYDEERRITVQGLIFATEIRELRSGRSLLQFKITDYT SSMIIKMFSRDNEDAAMFQNLKKGMWVKVRGSVQNDTFVRDLIMMAQDVNEIAGVKRL DTAEEKRAELHLHSPMSQMDATSSVDSLFKQAADWGHKAIAITDHSVAQSFPEAYGAG QKYGLKVIFGIEANLIDDGVPIAYNDQHIALEDATYCVFDVETTGLSAVYDTIIELAG VKMKNGEIIDKFEAFIDPGHPLSATTINLTGITDDMVKGSDPIDVVLKRFKEWSGDDI LVAHNASFDMGFINTAYEKVGLEKAENAVVDTLELARFLYPHFKNHRLNTLTKKFNII LEQHHRAVFDAEATAYLAWKLIKDAKEMHNIDFHDSLNDYMGEGDAYKRARPFHATIY AQTAVGLKNLFKLITMSNINYFYRVPRIPRSQLKKLREGLIIGTACSQGELFEAMMQK GMQAAEKVAEFYDFIEVQPKPVYAPLIERELVRDEKALEEILKNIVRVGEKTGKPVVA TGNVHYKDPVDKIYRKILIHSQGGANPLNRAELPDVHFRTTDEMLKEFAFLGEEKAKE IVVTNANLVVDWMENLKPIKDELYTPKIDGAEDEVRNMSYAMAHQLYGEKLPEIVEAR LEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSFVATMTEITEVNPLP PHYLCPNCKDSEFFDDGSVGSGFDLPDKDCPHCGTAYQKEGQDIPFETFLGFKGDKVP DIDLNFSGDYQPVAHAYTKEIFGEDYVFRAGTIGTVAEKTAFGYVRNYERDMNMTIRG AEIDRLVAGCTGVKRTTGQHPGGIIVIPDYMDVYDFTPVQFPADATDSEWKTTHFDFH SIHDNVLKLDILGHDDPTAIRMLQDLSGIDPKTIPTDDPDVMKLFGSTESLGVKPADI DSKTGTLGIPEFGTRFVRQMLEQTKPTTFSELVQISGLSHGTDVWLGNAEELIKNKTC ELPDVIGCRDDIMVFLIYQGLESSLAFKIMESVRKGKGLTDEMEEAMMANKVPLWYIE SCKKIKYMFPKAHAAAYVLMAVRIAYFKVHYPLYFYATYFTVRADDFDLTSMVNGKEA VKATMKEVNDKGMEASTKEKNLLTVLEIANEMLARGFHFQKVDLYKSSADEFIIDGES LIPPFNAIPSLGTNVAKQIVAARENGEFLSKEDLQQRGKVSKTIIQYMDDQGCLEGLP DQNQLSLF" misc_feature 1346966..1351282 /gene="polC" /locus_tag="lmo1320" /note="DNA polymerase III PolC; Validated; Region: polC; PRK00448" /db_xref="CDD:234767" regulatory 1351359..1351389 /regulatory_class="terminator" regulatory 1351456..1351461 /regulatory_class="ribosome_binding_site" gene 1351467..1351934 /locus_tag="lmo1321" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987701" CDS 1351467..1351934 /locus_tag="lmo1321" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464846.1" /db_xref="GeneID:987701" /translation="MSKVLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDKD GGVDIDECAAVSEKVSEKMDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHV TSYEPIDGRKMWEGTLVSYDGTTLVITITDKTRKITCEIPKDKVAKARLAIQF" misc_feature 1351467..1351931 /locus_tag="lmo1321" /note="ribosome maturation protein RimP; Reviewed; Region: PRK00092" /db_xref="CDD:234627" misc_feature order(1351773..1351775,1351779..1351781,1351800..1351802, 1351806..1351808,1351824..1351826,1351845..1351847, 1351878..1351886,1351890..1351895,1351899..1351916) /locus_tag="lmo1321" /note="putative oligomer interface [polypeptide binding]; other site" /db_xref="CDD:212481" misc_feature order(1351830..1351832,1351836..1351838,1351890..1351892) /locus_tag="lmo1321" /note="putative RNA binding site [nucleotide binding]; other site" /db_xref="CDD:212481" regulatory 1351948..1351953 /regulatory_class="ribosome_binding_site" gene 1351964..1353082 /gene="nusA" /locus_tag="lmo1322" /db_xref="GeneID:987702" CDS 1351964..1353082 /gene="nusA" /locus_tag="lmo1322" /experiment="EXISTENCE:[PMID:19448609]" /note="modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination" /codon_start=1 /transl_table=11 /product="transcription elongation factor NusA" /protein_id="NP_464847.1" /db_xref="GeneID:987702" /translation="MSTELLDALHVLEHDKGISREVLVEAIEAALTSAYKRNFKDAQN VRVDLNMENGSIRVLARKEAVEQVFDSRLEISMEEAHKLNPVYQPGDVVELEVTPKDF GRIAAQTAKQVVTQRVREAERGIIYDEFIDREDDIMTGIVERQDSRFIYVNLGKIEAI LSQNEQMPNETYHAHDRIKVYLTKVEKTTKGPQIFVSRTHPGLLKRLFEMEVPEIYDG VVEIKSVAREAGDRSKISVYTANEEVDPVGACVGPKGARVQTIVNELKGEKIDIVEWS EDPFTFVANALSPSKVLDVIVNEADQATTVIVPDYQLSLAIGKRGQNARLAAKLTGWK IDIKSETVATELGIYPRNGVEAPEVEEAESETFTEDEE" misc_feature 1351964..1353004 /gene="nusA" /locus_tag="lmo1322" /note="Transcription antitermination factor NusA, contains S1 and KH domains [Transcription]; Region: NusA; COG0195" /db_xref="CDD:439965" regulatory 1353085..1353090 /regulatory_class="ribosome_binding_site" gene 1353097..1353381 /locus_tag="lmo1323" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987703" CDS 1353097..1353381 /locus_tag="lmo1323" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464848.1" /db_xref="GeneID:987703" /translation="MRNKKIPLRKCIITGERLPKGELLRIAYSKDGALTIDPTGKAPG RGFYIVKSVEACEKAKKKNAIFHQLKMPEQESFYDELIAYVKSLEEPTNG" misc_feature 1353115..1353351 /locus_tag="lmo1323" /note="Ylxr homologs; group of conserved hypothetical bacterial proteins of unknown function; structure revealed putative RNA binding cleft; proteins are encoded by an operon that includes other proteins involved in transcription and/or translation; Region: YlxR; cd00279" /db_xref="CDD:238173" misc_feature order(1353121..1353123,1353169..1353171,1353238..1353240) /locus_tag="lmo1323" /note="putative RNA binding cleft [nucleotide binding]; other site" /db_xref="CDD:238173" regulatory 1353359..1353364 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1323" gene 1353374..1353673 /locus_tag="lmo1324" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987705" CDS 1353374..1353673 /locus_tag="lmo1324" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464849.1" /db_xref="GeneID:987705" /translation="MDKKALSLLGLANRARKITTGEELVLKAVRNGKAKMVLISEDIS EKTEKTIRNKCEYYNVVVKKAGTREMIGGAIGKDTRAIVAILDKGFAVKLAELLG" misc_feature 1353392..1353667 /locus_tag="lmo1324" /note="Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; Region: Ribosomal_L7Ae; cl00600" /db_xref="CDD:469835" regulatory 1353682..1353687 /regulatory_class="ribosome_binding_site" gene 1353696..1356035 /gene="infB" /locus_tag="lmo1325" /db_xref="GeneID:987704" CDS 1353696..1356035 /gene="infB" /locus_tag="lmo1325" /experiment="EXISTENCE:[PMID:19448609]" /note="Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-2" /protein_id="NP_464850.1" /db_xref="GeneID:987704" /translation="MSKVRVYEYAKEHQVSSKKVIEALKDLGIEVANHMSTINENALR QLDNAVDGTNKKAEAPKKETTSNENGNSKGPNKPNMTNSNEKSNKPNKPAGQANKPAT ANKSQGAKPATNKPANTSNQTQSSGTQQQAGGQKRNNSNRPGGGNSNRPGGNNRPNRG GNFNNKGRNTKKKGKLNHSTVPPTPPKPKELPEKIVFSESLTVAELAKKLYREPSELI KKLFMLGVVATINQSLDKDAIELICDDYGVQVEEEIKVDVTDLDVYFENELNEAVDES KLVERPPVVTIMGHVDHGKTTLLDSLRNTKVTLGEAGGITQHIGAYQLEIHDKKITFL DTPGHAAFTAMRARGAQITDITILVVAADDGVMPQTIEAINHAKAAGMPIIVAVNKID KPQANPDRVMQELTEYELVPEAWGGDTIFAPISAKFGEGLENLLDMILLVSEVEELKA NPDRRAIGSVIEAELDKGRGPVATLLVQDGTLNIGDPIVVGNTFGRVRAMVNDLGRRV KKVGPSTPVEITGLNDVPQAGDRFVVFEDEKTARNIGETRASRALVAQRSATNRVSLD NLFEHMKAGEMKEVNVIIKADVQGSVEALAASLRKIDVEGVNVKIIHTAVGAINESDI TLAAASNAIVIGFNVRPTAQAREAAENESVDIRLHRVIYKAIDEIEAAMKGMLDPEFQ EKIIGQAQVRQTINVSKVGTIAGCYVTDGKITRDSGVRIIRDGIVVFEGEIATLKRFK DDAKEVAKGYECGITVQNFNDIKEDDVIEAYVMEEIERK" misc_feature 1353696..1353854 /gene="infB" /locus_tag="lmo1325" /note="Translation initiation factor IF-2, N-terminal region; Region: IF2_N; pfam04760" /db_xref="CDD:428110" misc_feature <1353723..>1354169 /gene="infB" /locus_tag="lmo1325" /note="invasion associated endopeptidase; Region: PRK13914" /db_xref="CDD:237555" misc_feature 1354290..1354442 /gene="infB" /locus_tag="lmo1325" /note="Translation initiation factor IF-2, N-terminal region; Region: IF2_N; pfam04760" /db_xref="CDD:428110" misc_feature 1354530..1356032 /gene="infB" /locus_tag="lmo1325" /note="Translation initiation factor IF-2, a GTPase [Translation, ribosomal structure and biogenesis]; Region: InfB; COG0532" /db_xref="CDD:440298" regulatory 1356013..1356018 /regulatory_class="ribosome_binding_site" /gene="infB" /locus_tag="lmo1325" gene 1356032..1356310 /locus_tag="lmo1326" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987708" CDS 1356032..1356310 /locus_tag="lmo1326" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464851.1" /db_xref="GeneID:987708" /translation="MIQSVVSEFFMQEPQNLKEKRAILKRIITRAKQKFNISIAETDY QDLWQRAEVSFAVVSSSHIQAEKEAREVLAFLDSFPEWERAETVMEKL" misc_feature 1356032..1356301 /locus_tag="lmo1326" /note="Stress-induced protein YlxP, DUF503 family [Function unknown]; Region: YlxP; COG1550" /db_xref="CDD:441159" regulatory 1356312..1356317 /regulatory_class="ribosome_binding_site" gene 1356327..1356671 /gene="rbfA" /locus_tag="lmo1327" /db_xref="GeneID:987713" CDS 1356327..1356671 /gene="rbfA" /locus_tag="lmo1327" /experiment="EXISTENCE:[PMID:19448609]" /note="associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock" /codon_start=1 /transl_table=11 /product="ribosome-binding factor A" /protein_id="NP_464852.1" /db_xref="GeneID:987713" /translation="MNVRANRVSEQMKKELGDILNRKIKDPRLGFVTVTGVDVTGDLQ EAKVFISILGTDKEKENTLLALAKAHGFIRSEIGRRIRLRKVPEMSFEIDNSIAYGNR IDELLRDLNNDQ" misc_feature 1356327..1356668 /gene="rbfA" /locus_tag="lmo1327" /note="30S ribosome-binding factor RbfA; Region: rbfA; PRK00521" /db_xref="CDD:234787" regulatory 1356757..1356762 /regulatory_class="ribosome_binding_site" gene 1356769..1357683 /gene="truB" /locus_tag="lmo1328" /db_xref="GeneID:987709" CDS 1356769..1357683 /gene="truB" /locus_tag="lmo1328" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine synthase B" /protein_id="NP_464853.1" /db_xref="GeneID:987709" /translation="MNGIIPLWKERGMTSHDCVYKLRKILHTKKVGHTGTLDPEVEGV LPICIGRATKLAEYVTDEGKVYVAEITLGKSTTTEDATGETVNTKELAEISAAELQAA LTKLTGKITQIPPMFSAVKVNGKKLYEYARAGIEVERPSRQVDIYSLIRLDGDTALNQ SNPTFQLEIACGKGTYIRTLAVMIGELLGYPAHMSKLERTRSGFFKKEDCLTLTEIDE MMQASDSSFLYPLEKGIESMAKLVIEEEVYAKVLNGGLLPTSLFAEVENEPRAALIFK DKLTAIYKPHPEKKDLWKPEKVIELNQA" misc_feature 1356775..1357665 /gene="truB" /locus_tag="lmo1328" /note="tRNA U55 pseudouridine synthase TruB, may also work on U342 of tmRNA [Translation, ribosomal structure and biogenesis]; Region: TruB; COG0130" /db_xref="CDD:439900" regulatory 1357737..1357742 /regulatory_class="ribosome_binding_site" gene 1357753..1358697 /gene="ribC" /locus_tag="lmo1329" /db_xref="GeneID:987710" CDS 1357753..1358697 /gene="ribC" /locus_tag="lmo1329" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="riboflavin kinase" /protein_id="NP_464854.1" /db_xref="GeneID:987710" /translation="MKTIYLHHPITTDEWTDINKVMALGFFDGVHLGHQAVIKQAKQI AGQKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAKLGVDIMYVVRFTTQF SELSPQAFVDNYLVALHVEHVVAGFDYSYGKKGEGKMTDLAKYADGRFEVTIVDKQTA ASDKISSTNIRRAITEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNED YLIPKLGVYAVKFRVNGETHLGMASIGYNITFKDDQALSIEVYILDFHREIYGEEAEI KWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFAKLED" misc_feature 1357753..1358691 /gene="ribC" /locus_tag="lmo1329" /note="FAD synthase [Coenzyme transport and metabolism]; Region: RibF; COG0196" /db_xref="CDD:439966" regulatory 1358819..1358824 /regulatory_class="ribosome_binding_site" gene 1358834..1359103 /gene="rpsO" /locus_tag="lmo1330" /db_xref="GeneID:987711" CDS 1358834..1359103 /gene="rpsO" /locus_tag="lmo1330" /experiment="EXISTENCE:[PMID:19448609]" /note="primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S15" /protein_id="NP_464855.1" /db_xref="GeneID:987711" /translation="MALTQERKNEIIAEYRVHDTDTGSPEVQIAVLTAEINSLNEHVR VHKKDHHSYRGLMKMVGHRRNLLTYLRKKDVQRYRELIKRLGLRR" misc_feature 1358834..1359100 /gene="rpsO" /locus_tag="lmo1330" /note="30S ribosomal protein S15; Reviewed; Region: rpsO; PRK05626" /db_xref="CDD:180170" misc_feature order(1358855..1358857,1358906..1358908,1358915..1358917, 1358936..1358938,1358948..1358950,1358957..1358959, 1358969..1358971,1358975..1358980,1358984..1358989, 1359026..1359028,1359038..1359040) /gene="rpsO" /locus_tag="lmo1330" /note="16S/18S rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:238213" misc_feature order(1358921..1358923,1358930..1358935,1358942..1358944, 1358951..1358953,1359071..1359073,1359083..1359085) /gene="rpsO" /locus_tag="lmo1330" /note="S13e-L30e interaction site [polypeptide binding]; other site" /db_xref="CDD:238213" misc_feature order(1359011..1359013,1359023..1359025,1359086..1359091) /gene="rpsO" /locus_tag="lmo1330" /note="25S rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:238213" regulatory 1359117..1359149 /regulatory_class="terminator" gene 1359202..1359529 /locus_tag="lmos47" /db_xref="GeneID:18245143" misc_RNA 1359202..1359529 /locus_tag="lmos47" /product="rliD" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245143" regulatory 1359339..1359344 /regulatory_class="ribosome_binding_site" /locus_tag="lmos47" gene 1359352..1361523 /gene="pnpA" /locus_tag="lmo1331" /db_xref="GeneID:987712" CDS 1359352..1361523 /gene="pnpA" /locus_tag="lmo1331" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="polynucleotide phosphorylase" /protein_id="NP_464856.1" /db_xref="GeneID:987712" /translation="MSEKQVFSTEWAGKTLSVEVGQLAKQASGAALIRYGDTVVLTAA VGSKKPRPGDFFPLTVNYEEKMYSVGKVPGGFLKREGRPSDRATLTARLIDRPIRPLF AEGFRNEVQITSTVFSVDQDCSPEMAAMLGSSVALVISDIPFEGPIAGVDVGRIDGKY VINPTIEQAEKSDISLTVAGTYDAINMVEAGAKEVSEEAMLEAIMFGHEEIKRLCEFQ QQIIAAVGKEKREIELFVSDPELEAEVKAASEGKMKTAIKTEEKKAREAAIEEVKEEI LESYKAKELENESEILSEVAHILEMIEKDEMRRLISQDKIRPDGRKVNEIRPLSSEVG MLPRVHGSGLFTRGQTQALSVCTLAPLREHQIIDGLGTEEYKRFMHHYNFPQFSVGET GPRRAPGRREIGHGALGERALQYVIPSEEEFPYTIRLVSEVLESNGSSSQASICGSTL AMLDAGVPIKAPVAGIAMGLVKLGDDYTILSDIQGMEDHFGDMDFKVAGTKDGITALQ MDIKIDGLSRQILDEALTQAKEGRLHILEHLTSTISAPREELSAYAPKIITLNIKPEK IKDVIGPGGKQINAIIDETGVKIDIEQDGTVYIASQDQAMNRKAIAIIEDIVREVEVG EVYTGKVRRIEKFGAFVELFKGTDGLVHISELAHERVGKVEDILKLGDEVTVKVIEVD QQGRVNLSRKALLEKKEQPEGDKKPQAEKKFYPKTKKPESK" misc_feature 1359367..1361430 /gene="pnpA" /locus_tag="lmo1331" /note="Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis]; Region: Pnp; COG1185" /db_xref="CDD:440798" regulatory complement(1361521..1361553) /regulatory_class="terminator" regulatory 1361532..1361564 /regulatory_class="terminator" gene complement(1361564..1362604) /locus_tag="lmo1332" /db_xref="GeneID:987715" CDS complement(1361564..1362604) /locus_tag="lmo1332" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GTPase EngC" /protein_id="NP_464857.1" /db_xref="GeneID:987715" /translation="MILEQYGITSFFKEQKIAATSSYGRVTAVFRDYYRVITENEEFL ASLKRGNFYELSSTSLPTVGDFVEISGDLQILSVLERKTVFSRMNKDSAEQLIAANFD YALIVMSLNHDFNLNRLERYLTVAWDSGATPIIILTKADLVEDLSFYAQQLEAVAYGV PAYYVDNLSHHGFEALESDLKPNSTLILLGSSGVGKSSFINSLAGTDLMKTAGIREDD SKGKHTTTHREMHLLSNGWIVIDTPGMREFGVGFNQAGLETTFSDVEELAEGCRFHDC SHTQEPNCAVQAALEDGTLTMQHYENWLKLQREMAYHARKNSPALARQERDRWKVIQK SMRTHFKTRPKK" misc_feature complement(1361576..1362604) /locus_tag="lmo1332" /note="GTPase RsgA; Reviewed; Region: PRK01889" /db_xref="CDD:234988" regulatory complement(1362612..1362617) /regulatory_class="ribosome_binding_site" regulatory complement(1362721..1362756) /regulatory_class="terminator" gene complement(1362765..1363244) /locus_tag="lmo1333" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987717" CDS complement(1362765..1363244) /locus_tag="lmo1333" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464858.1" /db_xref="GeneID:987717" /translation="MKKNLRMLALGFLISAVVLLVYNQFFSTQTKADETKATSTKAGS DENSSTWKNKYEKLLAQQEVDKATEAEAKKKAEEDAKKKAEEAKKVKSYTLKISKGDP SSKAGDELQANGIIKSASDFDKYLRDNDYEKYIRDGSYNLKSDMSYETIAKILTHKN" misc_feature complement(<1362768..1362971) /locus_tag="lmo1333" /note="Endolytic transglycosylase MltG, terminates peptidoglycan polymerization [Cell wall/membrane/envelope biogenesis]; Region: MltG; COG1559" /db_xref="CDD:441167" regulatory complement(1363254..1363259) /regulatory_class="ribosome_binding_site" gene complement(1363272..1363739) /locus_tag="lmo1333a" /db_xref="GeneID:16695800" CDS complement(1363272..1363739) /locus_tag="lmo1333a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475636.1" /db_xref="GeneID:16695800" /translation="MHFLFIFFTKPYFGWCFEVNYAITSSRVYGREVCIKPMTTVIII LLIAAIALFVISFLQKGDNKQLEKELEDVAAQWMQENFELKQRISELEKAMKMDSPSI EAEQVPDSPKVRELMKKQVITLYTSGIVTSEIAEQSSLPKEEVEKIIEEYLKH" gene complement(1363272..1363628) /locus_tag="lmo1334" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987718" CDS complement(1363272..1363628) /locus_tag="lmo1334" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464859.1" /db_xref="GeneID:987718" /translation="MTTVIIILLIAAIALFVISFLQKGDNKQLEKELEDVAAQWMQEN FELKQRISELEKAMKMDSPSIEAEQVPDSPKVRELMKKQVITLYTSGIVTSEIAEQSS LPKEEVEKIIEEYLKH" regulatory 1363812..1363817 /regulatory_class="ribosome_binding_site" gene 1363826..1363975 /gene="rpmG" /locus_tag="lmo1335" /db_xref="GeneID:987719" CDS 1363826..1363975 /gene="rpmG" /locus_tag="lmo1335" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L33" /protein_id="NP_464860.1" /db_xref="GeneID:987719" /translation="MRVNITLECTECGDRNYITTKNKRENPERIELKKYCPRLRRVTL HRETK" misc_feature 1363826..1363972 /gene="rpmG" /locus_tag="lmo1335" /note="Ribosomal protein L33 [Translation, ribosomal structure and biogenesis]; Region: RpmG; COG0267" /db_xref="CDD:440037" regulatory 1363976..1364010 /regulatory_class="terminator" regulatory 1364017..1364022 /regulatory_class="ribosome_binding_site" gene 1364031..1364570 /locus_tag="lmo1336" /db_xref="GeneID:987720" CDS 1364031..1364570 /locus_tag="lmo1336" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="5-formyltetrahydrofolate cyclo-ligase" /protein_id="NP_464861.1" /db_xref="GeneID:987720" /translation="MEDKRLIREKILRNLNSIDKVEHRERSIKLAEKLFLLPEWENAK VVGITLARHPEIETEAIILQAKKEGKTILIPKTYYPSRKMEFKKMDSIHPLIKSKFGI LEPNELAETVDKKVIDLLIVPGVAFNKDHYRIGFGGGFYDRFLTDFQGHTVSLYLYEQ QIEFTPETHDEPVSILIGG" misc_feature 1364031..1364561 /locus_tag="lmo1336" /note="5-formyltetrahydrofolate cyclo-ligase [Coenzyme transport and metabolism]; Region: FAU1; COG0212" /db_xref="CDD:439982" regulatory 1364595..1364627 /regulatory_class="terminator" regulatory 1364656..1364661 /regulatory_class="ribosome_binding_site" gene 1364669..1366207 /locus_tag="lmo1337" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987722" CDS 1364669..1366207 /locus_tag="lmo1337" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464862.1" /db_xref="GeneID:987722" /translation="MSFQEQYVFWRLTNYFLGVEKYRLIHLHEEKQELWLENTSQKKR PVIRIQMKELSWANVVERDVTHTLHVTENLRKQMGRLKLPLVNIYITPFEPMGDISPF FGQSIASPNEKVKLENILLANEQMREHLDILIKTLELPEEAFVLPNEITKELVAKERE QVIAYITTKVNEEQKVARNSKPIVTYTFIGLLVAAFLWLSFQGGTTNSFNLIKWGGKF NPLIYAGEWWRFISPIFLHSGLMHIASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDV FSSQIDIAGHIGGLVGGFLLAGALSLPKQFFHWRRLAYGISLFAVAVLFLYFGYQKGE QPYDPMQANVAVQQYLQEQNKKEATKITDNLISSGSADGYSYTYAASIALQDKQIDKA ETMAKEAINIDKDIPEAHYYLSVCYRIKGDMPNAIKEANSARELSSNPFFDSYYDELE KIKE" misc_feature 1365206..1365757 /locus_tag="lmo1337" /note="Membrane-associated serine protease, rhomboid family [Posttranslational modification, protein turnover, chaperones]; Region: GlpG; COG0705" /db_xref="CDD:440469" misc_feature <1365887..1366198 /locus_tag="lmo1337" /note="Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis]; Region: LapB; COG2956" /db_xref="CDD:442196" misc_feature 1365956..1366048 /locus_tag="lmo1337" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" regulatory 1366206..1366211 /regulatory_class="ribosome_binding_site" gene 1366220..1366432 /locus_tag="lmo1338" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987721" CDS 1366220..1366432 /locus_tag="lmo1338" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464863.1" /db_xref="GeneID:987721" /translation="MKTVYDVAQLLRKHGIIVYLGKRQYDIEMMEYEITELFKHNILD RETFARARSILKQELIKEQRKNSSLN" misc_feature 1366223..1366417 /locus_tag="lmo1338" /note="Uncharacterized conserved protein YqgQ, DUF910 family [Function unknown]; Region: YqgQ; COG4483" /db_xref="CDD:443578" regulatory 1366443..1366448 /regulatory_class="ribosome_binding_site" gene 1366457..1367425 /locus_tag="lmo1339" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987723" CDS 1366457..1367425 /locus_tag="lmo1339" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glucose kinase" /protein_id="NP_464864.1" /db_xref="GeneID:987723" /translation="MNKKLIGVDLGGTTAKLAILTKEGDIEEKWTIDTNIEDKGAHIV KNIGDSINQKLTDLQLDNDIFYGIGMGTPGTVNYETGTVKGAYNLGWADEQNVSQDLE NITGLKIILDNDANVAALGERWKGAGEGGANVVFVTLGTGVGGGIFAEGKILHGIRGA AGEIGHVTVVPENGYDCTCGKKGCLETVASATGIVRVAKDLAKEFTGKSALKDAIDNN ETITSKLIFELGAEDDALANETIDKISFYLALALSHIGNMLNPEKIIIGGGVSAAGDQ LLTPVKTYFETMVFPAVKESTKLSIATKGNDAGIIGAAWLALPSED" misc_feature 1366466..1367404 /locus_tag="lmo1339" /note="ATPase-like domain of the ASKHA (Acetate and Sugar Kinases/Hsc70/Actin) superfamily; Region: ASKHA_ATPase-like; cl49607" /db_xref="CDD:483947" regulatory 1367439..1367474 /regulatory_class="terminator" regulatory 1367547..1367552 /regulatory_class="ribosome_binding_site" gene 1367559..1368650 /locus_tag="lmo1340" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987724" CDS 1367559..1368650 /locus_tag="lmo1340" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464865.1" /db_xref="GeneID:987724" /translation="MKKSNTFLLITILVGLVFISFGCSEEKETPKKTAKEVQGVQIKT KEFQRVVGWLSKDSVLLQTKKSGVTYFEELNIYNEKKRPIFNTKESISEVQISPDYRN ILLYSAESAEKATMRIIALNDGSTVASRATKPLTTTFYWNDESPEKIMFVTYSPEWNF QIENWDYTLDQLDKIDVASPFISWYGDNLVISNNKDKPDDELGNLYLQDIRDSATKNL IVANIMQFAVHDNVLLTIEKNSDEKLLYDFRTLGFQNFFSYNAAREYDELGTFVPYFD TNFDKNTFLTFVPYKSAKIGSGAKEYKLVKIDPTNKKESTILELMDNQPILSYETGDL VLYGYLFDKVIDTKTGKMYNLINTPTKSF" regulatory 1368653..1368681 /regulatory_class="terminator" gene complement(1368668..1368985) /locus_tag="lmo1341" /db_xref="GeneID:987725" CDS complement(1368668..1368985) /locus_tag="lmo1341" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein ComG" /protein_id="NP_464866.1" /db_xref="GeneID:987725" /translation="MKTNAFTLPFTIFIALISILIVTGSASIFKTQIQYEKMIQNYYL ASTKLNLAFIEIKETSSLSYQFKTNYKGTKIDCQATDNQLTEFNCQITLENGYTLTKT TSP" gene complement(1368982..1369449) /locus_tag="lmo1342" /db_xref="GeneID:987728" CDS complement(1368982..1369449) /locus_tag="lmo1342" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein ComGF" /protein_id="NP_464867.1" /db_xref="GeneID:987728" /translation="MQQINWKKNVSFRSGSPAFTLLETILSITIILSISLLIPLFFQC YNKTIQLSNIDQTTEWQLFLIQTRLELEKATNIQIDGNKLSFSNGKDLITYSKYNDLV RRQVNGKGHEPLLTNVKDYQLIKKEKQLHLTVQDSNTQIYTSVFALPEVVSNP" misc_feature complement(1369000..1369443) /locus_tag="lmo1342" /note="Competence protein ComGF [Mobilome: prophages, transposons]; Region: ComGF; COG4940" /db_xref="CDD:443967" gene complement(1369412..1369696) /locus_tag="lmo1343" /db_xref="GeneID:987726" CDS complement(1369412..1369696) /locus_tag="lmo1343" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein ComGE" /protein_id="NP_464868.1" /db_xref="GeneID:987726" /translation="MNKINGFSLVESMVSLLLFAMVCSFLLPTAMTIFEKLDHQKETS RVYQEIYEHSELLRHKNVPVNFKDERIQSFHYQGGIQICATNKLEEKCIF" misc_feature complement(1369463..1369693) /locus_tag="lmo1343" /note="competence type IV pilus minor pilin ComGE; Region: T4P_ComGE; NF041013" /db_xref="CDD:468942" regulatory complement(1369461..1369466) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1343" gene complement(1369683..1370111) /locus_tag="lmo1344" /db_xref="GeneID:987731" CDS complement(1369683..1370111) /locus_tag="lmo1344" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein ComGD" /protein_id="NP_464869.1" /db_xref="GeneID:987731" /translation="MKINGFTLLEMLLVLTISFTLITLTIFPISSTLSTLREKQLLEE IKASIYYAQINAVATNQDTFISFDPTKNQLITYTNSKTLVIIPFSQTLTLTQPKIRNF RFSSTDGSINRFSTIHLTSSTNNYKLIFQIGKGRFRIEQN" misc_feature complement(1369692..1370105) /locus_tag="lmo1344" /note="competence type IV pilus minor pilin ComGD; Region: ComGD; NF040982" /db_xref="CDD:468912" regulatory complement(1369707..1369712) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1344" gene complement(1370108..1370431) /locus_tag="lmo1345" /db_xref="GeneID:987732" CDS complement(1370108..1370431) /locus_tag="lmo1345" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein ComGC" /protein_id="NP_464870.1" /db_xref="GeneID:987732" /translation="MFKKKIDWRDERGFTLVEMLIVLLVVSVLLLLTIPNIVSQSKSI NDKGCEAFISMVQGQVQSYQLDKNSIPSVADLVSGGYLKANQKSCPNGNSIKIDSSGN VSEKK" misc_feature complement(1370111..1370431) /locus_tag="lmo1345" /note="Competence protein ComGC [Mobilome: prophages, transposons]; Region: ComGC; COG4537" /db_xref="CDD:443603" regulatory complement(1370116..1370120) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1345" regulatory complement(1370439..1370444) /regulatory_class="ribosome_binding_site" gene complement(1370445..1371476) /gene="comGB" /locus_tag="lmo1346" /db_xref="GeneID:987733" CDS complement(1370445..1371476) /gene="comGB" /locus_tag="lmo1346" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein ComGB" /protein_id="NP_464871.1" /db_xref="GeneID:987733" /translation="MAFFQRTNWKDDGEFLIRVASLLEKGFSLDATISYLSITSPKYC KRYERIITSLANGNSFSYALSKNGFPDFICSQLHYASSHGYFLQTIHETGVHMKRKAE EKNALMKTFQYPLVLFSTVILVFFLLRIFLLPKFELLFTQLSTNGTVGTNFTYFLLEK VPILLGIFLLSLFLIFSFIIRKQKQKNAYDRAYFYCRIPYIRQFSRIHYSQYLSRELG YLLKSGLSITHIMHLFAQEESPAFFQEIARQILPTLEQGLSLTKALEKMPIFEKELYY IAIHGEKNGNLAEEFLFYYNLCHQKSLQKTEKLFSFIQPIVFIVIGILIVSIYLSILY PMFSMVNQI" misc_feature complement(1370454..1371449) /gene="comGB" /locus_tag="lmo1346" /note="competence type IV pilus assembly protein ComGB; Region: T4P_ComGB; NF041012" /db_xref="CDD:468941" gene complement(1371454..1372476) /gene="comGA" /locus_tag="lmo1347" /db_xref="GeneID:987735" CDS complement(1371454..1372476) /gene="comGA" /locus_tag="lmo1347" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein ComGA" /protein_id="NP_464872.1" /db_xref="GeneID:987735" /translation="MPQKMTEHIITQALRINASDVHIHPLSNRYLLRLRVNGTLIPLL YLPIDVGEKLISFLKFQAALDISEKRRPQSGSFEKNTNTEKIALRLSTMPSKDFHESM VIRIFRYKHPIPFLNSSVFPRSTKQIQQQCKNQTGLFLFSGSTGSGKSSSMYSLASSI ENKDELQIITIEDPVEHYSPGFLQIEVNEKASITYAPIIRSVLRHDPDILIIGEIRDA ETAKIVIRAALTGHLVLSTVHAGDAYGVLLRLLEFGISSEELAQCLLGISFQKLTLLV CAFCGEKCHPLCTHLRRKRTAIYEVLTKQDIKAYFQSNQQQIEPKYPIKRTFEKGVSY GFFSAY" misc_feature complement(1371661..1372458) /gene="comGA" /locus_tag="lmo1347" /note="competence type IV pilus ATPase ComGA; Region: ATPase_ComGA; NF041000" /db_xref="CDD:468930" regulatory complement(1371482..1371487) /regulatory_class="ribosome_binding_site" /gene="comGA" /locus_tag="lmo1347" regulatory complement(1372482..1372487) /regulatory_class="ribosome_binding_site" gene 1372840..1372931 /locus_tag="lmos48" /db_xref="GeneID:18245144" misc_RNA 1372840..1372931 /locus_tag="lmos48" /product="Glycine" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245144" regulatory 1373001..1373006 /regulatory_class="ribosome_binding_site" gene 1373015..1374103 /gene="gcvT" /locus_tag="lmo1348" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987736" CDS 1373015..1374103 /gene="gcvT" /locus_tag="lmo1348" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein" /codon_start=1 /transl_table=11 /product="glycine cleavage system aminomethyltransferase T" /protein_id="NP_464873.1" /db_xref="GeneID:987736" /translation="MTELLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEAVRT DAGLFDVSHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVV YKKSETEYILVVNAANTDKDFEWMVKNIRGDVSVTNVSSEYGQLALQGPNAEKILSKL TDVDLSSISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGV APIGLGARDTLRLEAVLALYGQELSKDITPLEAGLNFAVKLKKEADFIGKEALIKQKE AGLNRKLVGIELIERGIPRHDYPVFLNEEQIGVVTSGTQSPTLGINIGLALIDTAYTE LGQEVEVGIRNKKVKAKIVPTPFYKRAK" misc_feature 1373021..1374100 /gene="gcvT" /locus_tag="lmo1348" /note="glycine cleavage system aminomethyltransferase GcvT; Region: gcvT; PRK00389" /db_xref="CDD:234742" regulatory 1374106..1374111 /regulatory_class="ribosome_binding_site" gene 1374119..1375465 /locus_tag="lmo1349" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987737" CDS 1374119..1375465 /locus_tag="lmo1349" /EC_number="1.4.4.2" /experiment="EXISTENCE:[PMID:19448609]" /note="acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein" /codon_start=1 /transl_table=11 /product="glycine dehydrogenase subunit 1" /protein_id="NP_464874.1" /db_xref="GeneID:987737" /translation="MAKHRYLPMTEQDEKEMLDVIGVKSIDDLFQDIPEKIRFKRDYD LKPAKSEPALLRELSKLASKNANTSEYASFLGAGVYSHYIPTVVDHVISRSEFYTAYT PYQPEISQGELQAIFEFQTMIAELTGMDLANSSMYDGGTALAEAAMLASGHTKRKKIL ISGAVHPESSNVLKTYATGQHIEVEVIPELDGKTDIEALKKALSDDIAGFVAQYPNFY GQVEPLAELEKLVHENNSLLLVSSNPLSLGLLTPPGEFGADIVVGDSQVFGIPESFGG PHCGFFAVTNKLMRKVPGRLVGETVDENGKRGYVLTLQAREQHIRRDKATSNICSNQA LNALASSVAMATLGKTGLVEMAKQNLDKSHYAKQKFREKGFEVLFSDGFFNEFVVKLS KPIKEVNKSLLDEGIIGGYDLGFYEEKYKHHMLVAVTEMRTKEEIDAFVASLEGAK" misc_feature 1374125..1375459 /locus_tag="lmo1349" /note="aminomethyl-transferring glycine dehydrogenase subunit GcvPA; Region: PRK00451" /db_xref="CDD:234769" misc_feature order(1374269..1374274,1374284..1374292,1374299..1374313, 1374350..1374352,1374356..1374358,1374362..1374376, 1374383..1374385,1374392..1374394,1374413..1374421, 1374425..1374433,1374437..1374439,1374446..1374454, 1374458..1374460,1374542..1374547,1374575..1374577, 1374611..1374622,1374629..1374634,1374638..1374643, 1374674..1374676,1374779..1374781,1374914..1374916, 1374929..1374949,1375115..1375123,1375139..1375141, 1375151..1375156,1375178..1375180,1375187..1375189, 1375202..1375204,1375208..1375210,1375232..1375234, 1375262..1375264,1375328..1375330,1375406..1375411, 1375418..1375423) /locus_tag="lmo1349" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:99737" misc_feature order(1374347..1374349,1374539..1374544,1374551..1374553, 1374614..1374616,1374620..1374622,1374839..1374841, 1374908..1374910,1374914..1374919) /locus_tag="lmo1349" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99737" misc_feature 1374917..1374919 /locus_tag="lmo1349" /note="catalytic residue [active]" /db_xref="CDD:99737" regulatory 1375449..1375454 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1349" gene 1375462..1376928 /locus_tag="lmo1350" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987740" CDS 1375462..1376928 /locus_tag="lmo1350" /EC_number="1.4.4.2" /experiment="EXISTENCE:[PMID:19448609]" /note="acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein" /codon_start=1 /transl_table=11 /product="glycine dehydrogenase subunit 2" /protein_id="NP_464875.1" /db_xref="GeneID:987740" /translation="MNLEETMPLVFERSIPGRIGFSLPESDVPETNAGDYFDQAYIRS IPADLPELSELEIMRHYTNLSNHNFGVDSGFYPLGSCTMKYNPKINEKVARFPGFANI HPNQPESSVQGALELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTGLMLIRAFHEKNG DTKRTKVIIPDSAHGTNPASAAVAGFDVVTVKSNEKGLVDVADLKKVVGEDTAALMLT NPNTLGLFEKDIVEMAEIVHEAGGKLYYDGANLNAIMAKVRPGDMGFDVVHLNLHKTF TGPHGGGGPGSGPIGVKKELIPFLPTPVLTKKEDIYTFDYNYPDSIGRVKPYYGNFGI NVRAYTYIRTMGPDGLKLVTEYAVLNANYMMRKLQEAYDLPFDQVCKHEFVLSGNRQK KLGVRTVDIAKRLLDHNFHPPTVYFPLIVGEAIMIEPTETESKETLDSFIDTMLKIAK EAEENPEIVQEAPHSTYVKRLDETRAARKPILRYQKEV" misc_feature 1375480..1376913 /locus_tag="lmo1350" /note="aminomethyl-transferring glycine dehydrogenase subunit GcvPB; Region: PRK04366" /db_xref="CDD:235292" misc_feature order(1375621..1375626,1375636..1375644,1375651..1375665, 1375702..1375704,1375708..1375710,1375714..1375728, 1375735..1375737,1375744..1375746,1375762..1375770, 1375774..1375782,1375786..1375788,1375795..1375803, 1375807..1375809,1375885..1375890,1375918..1375920, 1375978..1375989,1375996..1376001,1376005..1376010, 1376029..1376031,1376137..1376139,1376278..1376280, 1376452..1376460,1376476..1376478,1376488..1376493, 1376515..1376517,1376524..1376526,1376539..1376541, 1376545..1376547,1376569..1376571,1376596..1376598, 1376668..1376670,1376752..1376757,1376764..1376769) /locus_tag="lmo1350" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:99737" misc_feature order(1375699..1375701,1375882..1375887,1375894..1375896, 1375981..1375983,1375987..1375989,1376200..1376202, 1376272..1376274,1376278..1376283) /locus_tag="lmo1350" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99737" misc_feature 1376281..1376283 /locus_tag="lmo1350" /note="catalytic residue [active]" /db_xref="CDD:99737" regulatory 1376935..1376962 /regulatory_class="terminator" regulatory complement(1376935..1376962) /regulatory_class="terminator" gene complement(1376968..1377348) /locus_tag="lmo1351" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987739" CDS complement(1376968..1377348) /locus_tag="lmo1351" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1351" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464876.1" /db_xref="GeneID:987739" /translation="MISWIIAIIILVILLGYEIYQFVMRRKAVKVLTEEEFKKGYRKA QLIDVREPNEFDAGHILGARNIPVTQMKNRTTEIRQDLPVYLYCQTAQRSNRAAIMLY KRGYKQVYQLKGGYRKWTGKTKSK" misc_feature complement(1376992..1377267) /locus_tag="lmo1351" /note="Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]; Region: PspE; COG0607" /db_xref="CDD:440372" regulatory complement(1377358..1377363) /regulatory_class="ribosome_binding_site" gene complement(1377410..1377682) /locus_tag="lmo1352" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987741" CDS complement(1377410..1377682) /locus_tag="lmo1352" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1352" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464877.1" /db_xref="GeneID:987741" /translation="MKKYPLIAIVLLALVGIGLLMGGFKSFFILIVSVLIGTLIFTLL LRLFTNRKTDSNYQKAVKQSKNMHNPKKKTKKKRKSSFKVIDGGKK" misc_feature complement(1377488..1377670) /locus_tag="lmo1352" /note="SA1362 family protein; Region: SA1362_fam; NF041554" /db_xref="CDD:469439" regulatory complement(1377691..1377696) /regulatory_class="ribosome_binding_site" gene complement(1377695..1378660) /locus_tag="lmo1353" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987743" CDS complement(1377695..1378660) /locus_tag="lmo1353" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464878.1" /db_xref="GeneID:987743" /translation="MSKQNVPSYGGQAVVEGVMFGGRKQTVTAIRRIDGSLEYFYLEK NSPVWVMRMKKIPFLRGIVALIESSAIGSKHLAFATDRYDEDPNNPVEEEKIEKKESK VAMWLGVAVIGILSFVFAKFVMTLIPVFLAELFRPIVPGDTAQVFLESLFKLILLLTY IFAVSQTPIIKRVFQYHGSEHKVINCYEENLPLTVENVQKQSRLHYRCGSSFILFTVI VGMFIYLLVPTDPLWLRVVDRILLIPVVLGVAFEVLQLTNKCRNIPVLKYLGVPGLWL QLLTTKEPSDDQVEVAIASFNELLRVEKEGAPIDVVEPDNLELLE" misc_feature complement(1377728..1378642) /locus_tag="lmo1353" /note="Uncharacterized conserved protein YqhQ, DUF1385 family [Function unknown]; Region: YqhQ; COG3872" /db_xref="CDD:443081" regulatory 1378828..1378832 /regulatory_class="ribosome_binding_site" gene 1378840..1379901 /locus_tag="lmo1354" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987742" CDS 1378840..1379901 /locus_tag="lmo1354" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aminopeptidase P" /protein_id="NP_464879.1" /db_xref="GeneID:987742" /translation="MSKLTKIQETLGKEKIEAVLVTSEFNRRYVSGFTGTSGVALILP EKAYFVTDFRYTEQAAKQAEGYEIVQHTGPIFDTVEDLLIKNDTKTLHFEADYVTVSE FKQMERVFNRQLIPLTGFFEEMRKVKTASELKAIRTACDIADAAFAHIIQFIKPGMAE IEVSNELEFFMRRAGATSSSFDTIVASGIRSALPHGVASDKKIEVGDFVTMDYGCYYD GYCSDMTRTIAVGEPAEKLKEIYQITLDAQLKVIDSLKPGMTGIEADAIARDYISSFG YGDAFGHSLGHGIGLEIHEGPNLSFKSPQKLEVGHVVTDEPGIYLPGIGGVRIEDDLL ITETGNEILIHSPKELIIL" misc_feature 1378855..1379898 /locus_tag="lmo1354" /note="Xaa-Pro aminopeptidase [Amino acid transport and metabolism]; Region: PepP; COG0006" /db_xref="CDD:439777" regulatory 1379992..1379997 /regulatory_class="ribosome_binding_site" gene 1380004..1380561 /gene="efp" /locus_tag="lmo1355" /db_xref="GeneID:987744" CDS 1380004..1380561 /gene="efp" /locus_tag="lmo1355" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="elongation factor P" /protein_id="NP_464880.1" /db_xref="GeneID:987744" /translation="MISVNDFKTGLTIEVDNGIWRVLDFQHVKPGKGAAFVRSKLRNL RTGAIQEKTFRGGEKVAKAQIDNRKMAYLYADGTNHVFMDNESYEQIELPEDQIAHEL KFLKENMEINIIMYQGETIGIDLPNTVELVVTATDPGIKGDTSSGGSKPATLETGLVV QVPFFVNEGDKLVINTTEAAYVSRA" misc_feature 1380004..1380558 /gene="efp" /locus_tag="lmo1355" /note="Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) [Translation, ribosomal structure and biogenesis]; Region: Efp; COG0231" /db_xref="CDD:440001" regulatory 1380579..1380602 /regulatory_class="terminator" regulatory 1380705..1380710 /regulatory_class="ribosome_binding_site" gene 1380720..1381187 /locus_tag="lmo1356" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987128" CDS 1380720..1381187 /locus_tag="lmo1356" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase subunit (biotin carboxyl carrier subunit)" /protein_id="NP_464881.1" /db_xref="GeneID:987128" /translation="MLSIDEIKQLIELIDESTLDEFELETKDSKILLKKHKTVVATAV QEAPIAVTPAQTAPVTPAAAPQVEASTAEDVNLEVITSPMVGTFYASASPEDANFVSV GSKVSAQSVVCIVEAMKLFNEITADIDGEIAEILVSSGELVEFGQPLFKVRKK" misc_feature 1380747..1381178 /locus_tag="lmo1356" /note="Biotin carboxyl carrier protein [Lipid transport and metabolism]; Region: AccB; COG0511" /db_xref="CDD:440277" regulatory 1381186..1381191 /regulatory_class="ribosome_binding_site" gene 1381201..1382565 /locus_tag="lmo1357" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987387" CDS 1381201..1382565 /locus_tag="lmo1357" /EC_number="6.4.1.2" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase biotin carboxylase subunit" /protein_id="NP_464882.1" /db_xref="GeneID:987387" /translation="MIKKVLVANRGEIAVRIIRAAKELGVETVAIYSEADREALHIQL ADEAYCVGPAATKDSYLNMSNIISLAVLTNCDAIHPGYGFLAENADFAELCEDCNITF IGPSASAISQMGTKDVARETMRKAGVPIVPGSQGIVADVEDGKKIAKKIGYPVIIKAT AGGGGKGIRVAENEEKLISGIHTTQQEAEAAFGDPGVYLEKYIQDFRHVEIQVLADNH GNVIHLGERDCSIQRRLQKLIEESPSPAIDEKTRQKMGKAAVKAAKAVNYSGAGTIEF IYDHHENNFYFMEMNTRIQVEHPVTELVTGIDLVKQQFLVASGEELQIKQADVKLTGW AMECRINAENPEKNFMPAPGEIKFYLPPGGLGVRIDSAAYPNYKIPPYYDSMIAKVIC YAETREEVIQKMKRALSEFAIDGIPSTIPFHLRVLDNDVFLSGDFNTKFLEQNDVMNL SKEG" misc_feature 1381201..1382556 /locus_tag="lmo1357" /note="acetyl-CoA carboxylase biotin carboxylase subunit; Validated; Region: PRK08591" /db_xref="CDD:236307" regulatory 1382555..1382560 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1357" gene 1382569..1382976 /locus_tag="lmo1358" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987881" CDS 1382569..1382976 /locus_tag="lmo1358" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464883.1" /db_xref="GeneID:987881" /translation="MAYTKDLRKQNDAPLGKIEIAPEVIGVIAGLAASEIENVAYMQG GFATEMREKFSGAVNYRKGVKVELTEEGILIELYCSVLFGATIPLVAQNIQDAVRDTI FNMTGLNVLEINVHIVGVQFEKTETLSFDDFEL" misc_feature 1382599..1382946 /locus_tag="lmo1358" /note="Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family [Function unknown]; Region: YloU; COG1302" /db_xref="CDD:440913" regulatory 1382992..1382997 /regulatory_class="ribosome_binding_site" gene 1383007..1383393 /gene="nusB" /locus_tag="lmo1359" /db_xref="GeneID:987880" CDS 1383007..1383393 /gene="nusB" /locus_tag="lmo1359" /experiment="EXISTENCE:[PMID:19448609]" /note="Regulates rRNA biosynthesis by transcriptional antitermination" /codon_start=1 /transl_table=11 /product="transcription antitermination protein NusB" /protein_id="NP_464884.1" /db_xref="GeneID:987880" /translation="MKRREAREKALQALFQIELNEMSLDQAIKNIMEDEQDDYMEKLV EGVMANKAEIDAIIEPNLDNWRMDRLSKVDLSLLRLSVYEIKYLDDVPNRVSLNESIE IAKIYSDEKSSKFINGVLANIAPEDK" misc_feature 1383007..1383384 /gene="nusB" /locus_tag="lmo1359" /note="transcription antitermination factor NusB; Region: nusB; PRK00202" /db_xref="CDD:234686" misc_feature order(1383013..1383015,1383025..1383027) /gene="nusB" /locus_tag="lmo1359" /note="putative RNA binding site [nucleotide binding]; other site" /db_xref="CDD:238342" regulatory 1383402..1383427 /regulatory_class="terminator" regulatory 1383475..1383480 /regulatory_class="ribosome_binding_site" gene 1383489..1384343 /gene="folD" /locus_tag="lmo1360" /db_xref="GeneID:987879" CDS 1383489..1384343 /gene="folD" /locus_tag="lmo1360" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate" /codon_start=1 /transl_table=11 /product="bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase" /protein_id="NP_464885.1" /db_xref="GeneID:987879" /translation="MGEIIDGKKLAKEIQEKVTREVAELVKEGKQPGLAVVLVGDNQA SRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEH ISEEKVIDTISFDKDVDGFHPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRA VVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDY IKPGAIVIDVGMDRDENNKLCGDVDFDDVVQEAGFITPVPGGVGPMTITMLLANTLKA AKRIWKMN" misc_feature 1383489..1384340 /gene="folD" /locus_tag="lmo1360" /note="bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD; Region: PRK14170" /db_xref="CDD:172658" regulatory 1384349..1384354 /regulatory_class="ribosome_binding_site" gene 1384362..1385714 /gene="xseA" /locus_tag="lmo1361" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987878" CDS 1384362..1385714 /gene="xseA" /locus_tag="lmo1361" /EC_number="3.1.11.6" /experiment="EXISTENCE:[PMID:19448609]" /note="bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease VII large subunit" /protein_id="NP_464886.1" /db_xref="GeneID:987878" /translation="MEQDKYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLKQPASG HLYFTVKDEFAMLRSVMFHKAVQKIGFVPEDGMNVLVTGRIGVFTKAGRYQFYAEHME PDGVGALYIQLEQLKAQLEKEGLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIH RRMPSVEVIVYPTIVQGEKAAQKIVENIGKINQRNDIDVMIIGRGGGSLEELWAFNEE PVVRAVYDSDVPVISAVGHETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAER KYRLLAVTRQALERKERSLEQLKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIF VKQTAFDRLNDRLHYYHPNKEIELQKEQMTLHLQALDKAMKQLLKDKQQSFFRQVDAL EHLSPLSLLKRGFGVTYKENTLVKSVQELEVGDNIQVKMQGGHIDALITAKEEDISGN " misc_feature 1384365..1385699 /gene="xseA" /locus_tag="lmo1361" /note="Exonuclease VII, large subunit [Replication, recombination and repair]; Region: XseA; COG1570" /db_xref="CDD:441178" gene 1385704..1385931 /locus_tag="lmo1362" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987876" CDS 1385704..1385931 /locus_tag="lmo1362" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the bidirectional exonucleolytic cleavage of DNA" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease VII small subunit" /protein_id="NP_464887.1" /db_xref="GeneID:987876" /translation="MATKKKTFEEAIAELETIVEALENGSASLEDSLDMYQKGIELTK LCQDKLQSAEKRMAKVVTDAGEEIPFEADGE" misc_feature 1385704..1385928 /locus_tag="lmo1362" /note="exodeoxyribonuclease VII small subunit; Provisional; Region: PRK14064" /db_xref="CDD:172554" regulatory 1385918..1385923 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1362" gene 1385934..1386815 /locus_tag="lmo1363" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987873" CDS 1385934..1386815 /locus_tag="lmo1363" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="geranyltranstransferase" /protein_id="NP_464888.1" /db_xref="GeneID:987873" /translation="MQDLTLFLEQYKKVIDESLFKEINERNIEPRLKESMLYSIQAGG KRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNH KVFGDATAILAGDALLTLAFSILAEDDNLSFETRIALINQISFSSGAEGMVGGQLADL EAENKQVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQI SDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKRALNEHVTIAKSALSGHDF DDEILLKLADLIALREN" misc_feature 1385937..1386797 /locus_tag="lmo1363" /note="Geranylgeranyl pyrophosphate synthase [Coenzyme transport and metabolism]; Region: IspA; COG0142" /db_xref="CDD:439912" regulatory 1386999..1387004 /regulatory_class="ribosome_binding_site" gene 1387014..1387214 /gene="cspL" /locus_tag="lmo1364" /db_xref="GeneID:987871" CDS 1387014..1387214 /gene="cspL" /locus_tag="lmo1364" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cold-shock protein" /protein_id="NP_464889.1" /db_xref="GeneID:987871" /translation="MEQGTVKWFNAEKGFGFIERENGDDVFVHFSAIQGDGFKSLDEG QAVTFDVEEGQRGPQAANVQKA" misc_feature 1387014..1387211 /gene="cspL" /locus_tag="lmo1364" /note="Cold shock protein, CspA family [Transcription]; Region: CspC; COG1278" /db_xref="CDD:440889" regulatory 1387238..1387259 /regulatory_class="terminator" gene 1387381..1389210 /gene="tktB" /locus_tag="lmo1365" /db_xref="GeneID:987660" CDS 1387381..1389210 /gene="tktB" /locus_tag="lmo1365" /EC_number="2.2.1.7" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate" /codon_start=1 /transl_table=11 /product="1-deoxy-D-xylulose-5-phosphate synthase" /protein_id="NP_464890.1" /db_xref="GeneID:987660" /translation="MSCFYLDLLKIKDPSFMKRLDIQELEALAADIRAFLITSTSKSG GHIGPNLGVVELTIALHYSFNSPKDKFIWDVGHQSYVHKILTGRANQFGTLREHGGLD GFPKRKESIHDVFETGHSSTSLSAAAGMVIARDIKKEDFYVIPIIGDGALTGGMALEA LNHIGDMGKDMIVILNDNDMSIAPNVGAIHNILGKLRTSDTSKQTKTNVDGAFFEELG FMYLGPIDGHDIEEVITNLELAKRAKGPVLLHIVTKKGKGYQPAELDSRGTWHGTGPY KVETGSFIKPAKRAASWSSVISNELIRLAEMDERIVAITPAMPVGSKLEKFAKAFPER FFDVGIAEQHATTMAAGLATQGMKPFLAIYSTFLQRAYDQLVHDVCRQKLNVVIGIDR AGLVGADGETHQGIFDISFLNSIPNMTISMPKDEVEARQLMDTAFSYNDGPFAIRYPR GEAPGVQVVESNTLIPIGQWETIIQPLDAVILTFGPTIELALKAAEQLEIEGYRVGVI NARYIKPLDEALLHKILKQKIPILTVEESLLKGGFGASVLEFIEANNYRDVIMHRIGL PDEFISHGSVSIILESFGISTTGLVLKIKEMLAQSGKLRAKRL" misc_feature 1387402..1389177 /gene="tktB" /locus_tag="lmo1365" /note="Deoxyxylulose-5-phosphate synthase [Coenzyme transport and metabolism, Lipid transport and metabolism]; Region: Dxs; COG1154" /db_xref="CDD:440768" regulatory 1389193..1389198 /regulatory_class="ribosome_binding_site" /gene="tktB" /locus_tag="lmo1365" gene 1389207..1390031 /locus_tag="lmo1366" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986969" CDS 1389207..1390031 /locus_tag="lmo1366" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464891.1" /db_xref="GeneID:986969" /translation="MTIKKERADILLVEQGLFETREKAKRAIMAGIVYRKEERVDKPG EKIPIDSELQVKGKQMPYVSRGGLKLEKALQVFDFEVKDKLMLDIGASTGGFTDCALQ NGARHSYALDVGYNQLAWKLRNDDRVTVMERTNFRHVKPADFAEGLADFATIDVSFIS LKLILPVLRTVLVTGGDVMTLIKPQFEAGREQVGKKGIIRDPAVHESVVEHIVQFALD NGYDLMGLDYSPITGGEGNIEFIAHLKWTGEETGISHLEPDAIAKLITKAHTKLDK" misc_feature 1389222..1389956 /locus_tag="lmo1366" /note="Predicted rRNA methylase YqxC, contains S4 and FtsJ domains [Translation, ribosomal structure and biogenesis]; Region: YqxC; COG1189" /db_xref="CDD:440802" regulatory 1390038..1390061 /regulatory_class="terminator" regulatory 1390209..1390214 /regulatory_class="ribosome_binding_site" gene 1390222..1390671 /locus_tag="lmo1367" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987665" CDS 1390222..1390671 /locus_tag="lmo1367" /experiment="EXISTENCE:[PMID:19448609]" /note="regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes" /codon_start=1 /transl_table=11 /product="arginine repressor ArgR" /protein_id="NP_464892.1" /db_xref="GeneID:987665" /translation="MNKGHRHIIIRELITSNEIDTQEDLVELLLERDVKVTQATVSRD IKELHLVKVPTQTGGYKYSLPADNSFNPHQKLKRALIDCFIGIDNVQFMIILKVMPGN GNSVGALIDNLDWPEKAGTICGDDTCLIICRSEENAKTLTDRFIDML" misc_feature 1390225..1390668 /locus_tag="lmo1367" /note="transcriptional regulator ArgR; Region: PRK04280" /db_xref="CDD:179807" regulatory 1390679..1390684 /regulatory_class="ribosome_binding_site" gene 1390694..1392385 /gene="recN" /locus_tag="lmo1368" /db_xref="GeneID:987672" CDS 1390694..1392385 /gene="recN" /locus_tag="lmo1368" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA repair protein" /protein_id="NP_464893.1" /db_xref="GeneID:987672" /translation="MLQEMTIKNFAIIESLSLTFQEGMTVLTGETGAGKSIIIDALGL LVGGRGSADFIRHGEERLELQGLFALAEDNLACRNALIENGIDASDDMVVLERSLFRS GKNSCRINGKLVTTVLLRQIGSKLIDIHSQHEHQELMNEEFHLSLLDRFASDKIKPAL TKYQTNFKEYQTIEKEWQNWTKNERELAQRLDMLRFQQQEIENADLQAGEEDRLLEQK NILANFEKLNENLQGAYAAIQGEPGGLEFVGEAMRQMETAASIHTDYKAVSEAISSSY YMLEDSMSQIRQSLDQLEFQPEELNQIESRLNDLNQLKRKYGKTIEDIIQYEQEISSE MEKLTDSESHVGHLETKLATLKTELTKQAATLTDIRKKAAVTLEKQIKQELNQLYMEK AIFSVRFEANKMELTELGQDSVVFYMSTNPGEPLKPLAKIASGGELSRMMLALKTIFS RHQGITSIIFDEVDTGVSGRVGQAIAEKIYAVSVGSQVLCISHLPQVAAMANHHYYIT KKVQNKRTTTSVTVLKGVEKVEEISRMIAGIEVTELTKQHAKEMIEQAEKVKQTY" misc_feature 1390694..1392367 /gene="recN" /locus_tag="lmo1368" /note="DNA repair ATPase RecN [Replication, recombination and repair]; Region: RecN; COG0497" /db_xref="CDD:440263" regulatory 1392501..1392506 /regulatory_class="ribosome_binding_site" gene 1392514..1393380 /locus_tag="lmo1369" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986887" CDS 1392514..1393380 /locus_tag="lmo1369" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphotransbutyrylase" /protein_id="NP_464894.1" /db_xref="GeneID:986887" /translation="MTKSRFFSDVAETSSFVFAVAGADDEVVLETIRLALKQKLGKFL LFGKKEDKTLTANESVTWIQTDTAEAAAQGAILAVKNKEADILVKGFIPTATLMHHVL KKENGLRTDQLLSQIAIFDIPTYHKPLLITDCAMNVAPKTKEKIAITENALAVAHQIG ITNPKIALLSAVEEVTAKMPSTLEAQEVVQHFGNQISVSGPLALDVAISKEAALHKGI TDSSAGEADILIAPNIETGNALYKSLVYFAGAKVGSAVVGAKVPIVISSRNDSPENKL ASFILTVRLVEK" misc_feature 1392568..1393362 /locus_tag="lmo1369" /note="Phosphate acetyl/butaryl transferase; Region: PTA_PTB; cl17212" /db_xref="CDD:450173" regulatory 1393504..1393509 /regulatory_class="ribosome_binding_site" gene 1393517..1394584 /locus_tag="lmo1370" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987676" CDS 1393517..1394584 /locus_tag="lmo1370" /EC_number="2.7.2.7" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate" /codon_start=1 /transl_table=11 /product="butyrate kinase" /protein_id="NP_464895.1" /db_xref="GeneID:987676" /translation="MSFDVLTINPGSTSTKLAVYQGDKVLFEETVRHTMQELADFNNV QEQFDFRWQVLRRVMDAHGYDVKKLQAVVGRGGLLRPVAGGTYMVTEKMIDDLKENKY GEHASNLGAMLAKKLADELTIPSFIVDPVVVDEMQEIARISGNAFVTRKSIFHALNHK AAGRKIAKELGKDYEKMNFVIAHLGGGISVAAHRQGKAVDVNNALDGDGPFSPERSGS LPMNDFLEACFSGKWTKRELHELIVGRGGMISYLGTNSMLEVEAKVQAGEEKAIEAFD AMAYQVSKEIGACSVVLQGKVDAIILTGGLARSELFTSKIIEQTNWITSVIIEPGEDE LEALNSGVQRVLAGLEKEKEY" misc_feature 1393520..1394581 /locus_tag="lmo1370" /note="butyrate kinase; Provisional; Region: PRK03011" /db_xref="CDD:235099" regulatory 1394586..1394591 /regulatory_class="ribosome_binding_site" gene 1394599..1396026 /locus_tag="lmo1371" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987674" CDS 1394599..1396026 /locus_tag="lmo1371" /EC_number="1.8.1.4" /experiment="EXISTENCE:[PMID:19448609]" /note="E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide" /codon_start=1 /transl_table=11 /product="dihydrolipoamide dehydrogenase" /protein_id="NP_464896.1" /db_xref="GeneID:987674" /translation="MAKEYDVVILGGGTGGYVAAIQAAKNGQKVAVVEKGKVGGTCLH RGCIPTKALLRSAEVLQTVKKASEFGISVEGTAGINFLQAQERKQAIVDQLEKGIHQL FKQGKIDLFVGTGTILGPSIFSPTAGTISVEFEDGSENEMLIPKNLIIATGSKPRTLS GLTIDEEHVLSSDGALNLETLPKSIIIVGGGVIGMEWASMMHDFGVEVTVLEYADRIL PTEDKEVAKELARLYKKKKLNMHTSAEVQAASYKKTDTGVEIKAIIKGEEQTFTADKI LVSVGRSANTENIGLQNTDIATENGFIQVNDFYQTKESHIYAIGDCIPTIQLAHVAME EGTIAANYIAGKAAEKLDYDLVPRCIYTSTEIASVGITEEQAKERGHEVKKGKFFFRG IGKALVYGESDGFIKIIADKKTDDILGVSMIGPHVTDMISEAALAQVLNATPWEVGNT IHPHPTLSESFREAALAVDGNAIHG" misc_feature 1394602..1396008 /locus_tag="lmo1371" /note="Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Region: Lpd; COG1249" /db_xref="CDD:440861" regulatory 1396038..1396043 /regulatory_class="ribosome_binding_site" gene 1396051..1397046 /locus_tag="lmo1372" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987855" CDS 1396051..1397046 /locus_tag="lmo1372" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="branched-chain alpha-keto acid dehydrogenase subunit E1" /protein_id="NP_464897.1" /db_xref="GeneID:987855" /translation="MTLKEAGLTEDKLIKMYETMLMARRLDERMWLLNRSGKIPFTIS GQGQETAQIGAAFAFDLDKDYALPYYRDLAVVLAFGMTAKDIMLSAFAKAEDPNSGGR QMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLAAKMAGDEIAIYASTGEGSSNQGDFH EGINFASVHKLPVVFVIHNNQYAISVPASKQYAAEKLSDRAIGYGIPGERVDGTNMGE VYAAFKRAADRARNGEGPTLIETVSYRFTPHSSDDDDSSYRSREEVNEAKGKDPLTIF QTELLEEGYLTEEKIAEIEKNIAKEVNEATDYAESAAYAEPESSLLYVYDEEANS" misc_feature 1396060..1397034 /locus_tag="lmo1372" /note="TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha [Energy production and conversion]; Region: AcoA; COG1071" /db_xref="CDD:440689" regulatory 1397049..1397054 /regulatory_class="ribosome_binding_site" gene 1397063..1398046 /locus_tag="lmo1373" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987859" CDS 1397063..1398046 /locus_tag="lmo1373" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="branched-chain alpha-keto acid dehydrogenase subunit E1" /protein_id="NP_464898.1" /db_xref="GeneID:987859" /translation="MPVISYIDAITMALKEEMERDDKVFILGEDVGKKGGVFKATAGL YDEFGEDRVLDTPLAESALAGVGIGAAMYGYRPVAEMQFADFIMPAVNQIISEAARIR YRSNNDWSCPMVIRAPFGGGVHGALYHSQSVEKVFFGQPGLKIVVPSSPYDAKGLLKA AIRDNDPVLFFEHKRAYRLLKGEVPETDYIVPIGEANVVREGDDITVITYGLAVQFAQ QAAERLAAEGVEAHILDLRTIYPLDQEAIIEATKKTGKVLLVTEDNKQGSIISEVAAI ISEHCLFDLDAPIARLAGPDTPAMPFAPTMEKHFMINPDKVADAMKELAEF" misc_feature 1397063..1398043 /locus_tag="lmo1373" /note="Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component, beta subunit [Energy production and conversion]; Region: AcoB; COG0022" /db_xref="CDD:439793" regulatory 1398063..1398068 /regulatory_class="ribosome_binding_site" gene 1398077..1399327 /locus_tag="lmo1374" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987858" CDS 1398077..1399327 /locus_tag="lmo1374" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="branched-chain alpha-keto acid dehydrogenase subunit E2" /protein_id="NP_464899.1" /db_xref="GeneID:987858" /translation="MAVEKITMPKLGESVTEGTISSWLVKPGDTVEKYDAIAEVLTDK VTAEIPSSFSGTIKEILAEEDETLEVGEVICTIETEEASSSEPVVEAEQTEPKTPEKQ ETKQVKLAEAPASGRFSPAVLRIAGENNIDLSTVEGTGKGGRITRKDLLQVIENGPVA PKREEVKSAPQEKEATPNPVRSAAGDREIPINGVRKAIAKHMSVSKQEIPHAWMMVEV DATGLVRYRNTVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTWAGDKIIEHAN INISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVN STGSFGSVQSMGIINHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGL LAGKFLQAIKAKVEKISKENTALY" misc_feature 1398077..1399297 /locus_tag="lmo1374" /note="branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed; Region: PRK11856" /db_xref="CDD:237001" gene 1399363..1399433 /locus_tag="lmos49" /db_xref="GeneID:18245145" misc_RNA 1399363..1399433 /locus_tag="lmos49" /product="sbrA" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245145" regulatory 1399403..1399426 /regulatory_class="terminator" /locus_tag="lmos49" gene 1399447..1399617 /locus_tag="lmos50" /db_xref="GeneID:18245117" misc_RNA 1399447..1399617 /locus_tag="lmos50" /product="rli42" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245117" regulatory 1399686..1399691 /regulatory_class="ribosome_binding_site" gene 1399699..1400796 /locus_tag="lmo1375" /db_xref="GeneID:987853" CDS 1399699..1400796 /locus_tag="lmo1375" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aminotripeptidase" /protein_id="NP_464900.1" /db_xref="GeneID:987853" /translation="MMLSNVKKYFTELIQTPSVSGKETAILTYIKKHLAKLNIEYSLD EDYGLIARIPATKEKFPTIFFCSHVDTHPNAATPVFQMEQDVFTAEKGTSLGADDKAA VAAMLAAIDYFCAERTAHGEIEFIFTTKEELGMIGMRLFPEEKITAAYGYCLDAPGEV GNYQLQANTLVALEFTIASSEAAQMSPISIARMALHATRPGRIDRENKWEIQSFSGGI NDENQQDAQLEVLFTSAASFRKALLHIQSIRERFAQTCEKYGAILTHDTKLIYEGYQI RSKHPLMNIFQKAAKKQSLETKEIFLEGGTDANVLNEKGIPTMLLSAGYENAHTEEET VSIEQLEKLTQLIIDLAESAKNEKILLRKLN" misc_feature 1399711..1400754 /locus_tag="lmo1375" /note="peptidase T-like protein; Region: PepT-like; TIGR01883" /db_xref="CDD:162579" regulatory 1400926..1400931 /regulatory_class="ribosome_binding_site" gene 1400941..1402359 /locus_tag="lmo1376" /db_xref="GeneID:987851" CDS 1400941..1402359 /locus_tag="lmo1376" /EC_number="1.1.1.44" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate" /codon_start=1 /transl_table=11 /product="6-phosphogluconate dehydrogenase" /protein_id="NP_464901.1" /db_xref="GeneID:987851" /translation="MAKQEIGVIGMGVMGRNLALNIESRGHTVSIFNRSTEKTKAVME ENADKKLVPTYSLEEFVESLEVPRRILIMVKAGDATDMMIEAVKPFLNEGDILIDGGN AFFKDTIRRNKELSEEGFNFIGTGVSGGEEGALKGPSIMPGGQRKAYDLVAPILREIA AVADGEPCVTYIGPDGAGHYVKMVHNGIEYGDMQLIAEAYTILKEIGGLSHDELADVF EEWNNGELDSYLIEITKNILKVKDEETGKPIVDVILDKAGQKGTGKWTSQSALDLGVP LSLITESVFARYISALKEERVYASTVLTGPSNYRFEGDKKAFVESVRRALYFSKIASY AQGFAQMRAASEEYNWDLQYGEIAKIFRAGCIIRARFLQKITDAYNQDKNLKNLLLDP YFKDIAHNYQGDLRTVVAEAVKAGIPVPTFTAAISYYDSYRSEVLSANLIQAQRDYFG AHTYERVDKPGVFHTEWPQVED" misc_feature 1400944..1402341 /locus_tag="lmo1376" /note="6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]; Region: Gnd; COG0362" /db_xref="CDD:440131" regulatory 1402370..1402395 /regulatory_class="terminator" regulatory 1402535..1402540 /regulatory_class="ribosome_binding_site" gene 1402550..1403230 /gene="lisR" /locus_tag="lmo1377" /db_xref="GeneID:987849" CDS 1402550..1403230 /gene="lisR" /locus_tag="lmo1377" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_464902.1" /db_xref="GeneID:987849" /translation="MNRILIVEDEKNLARFIELELQHENYETAVANDGRAGLELALNE EWDAILLDLMLPHLNGVEVCRRVRQVKQTPIIMITARDSVIDRVSGLDHGADDYIVKP FAIEELLARLRSLLRRVENAEQSAKQTTLQYRNLIVEKENRIVKRDEEIIDLTKREYE LLLTLMENVNIVLTREVLLNKVWGYETEVETNVVDVYVRYLRNKIDHPDEESYIQTVR GTGYVMRT" misc_feature 1402550..1403197 /gene="lisR" /locus_tag="lmo1377" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" gene 1403227..1404678 /gene="lisK" /locus_tag="lmo1378" /db_xref="GeneID:987844" CDS 1403227..1404678 /gene="lisK" /locus_tag="lmo1378" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component sensor histidine kinase" /protein_id="NP_464903.1" /db_xref="GeneID:987844" /translation="MTTSPFSLKSRSLKFKWTFGASAAIFLTFFLFSYAIYQGIGQML LNEEEPEVKELLLATTSTLTNQDLTDNEEIKYLFNNDKTVNRKLQDQVINLYDKDGHF INKYYFSRSQDITSIDFSQYFVSGTDKFIMNKPTIDGQKMMTAQMPIVADDNTTVIGY AQVVNPLTSYNRMMDRLLVTMILLGAVALFISGMLGYLLAQNFLNPLTRLARTMNDIR KNGFQKRIETKTNSRDEIGELTVVFNDMMTRIETSFEQQKQFVEDASHELRTPVQIME GHLKLLTRWGKDDPAVLDESLNASLTELERMKKLVQEMLDLSRAEQISQTKELQITDV NATVEQVRRNFEVMYENFTFTLKEDDTDLRALIQHNHLEQILIIIMDNAVKYSGDGTE VDMHVYKEQKQIHIDVRDYGEGISQEEIDKIFNRFYRVDKARSREKGGNGLGLAIAKQ LVEGYLGTINAVSEPDKGTTIKITLPYIEPKSK" misc_feature 1403344..1403754 /gene="lisK" /locus_tag="lmo1378" /note="ArlS sensor domain; Region: ArlS_N; pfam18719" /db_xref="CDD:465847" misc_feature 1403566..1404654 /gene="lisK" /locus_tag="lmo1378" /note="Sensor histidine kinase WalK [Signal transduction mechanisms]; Region: WalK; COG5002" /db_xref="CDD:444026" regulatory 1404683..1404707 /regulatory_class="terminator" regulatory complement(1404683..1404707) /regulatory_class="terminator" gene complement(1404714..1405541) /locus_tag="lmo1379" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987847" CDS complement(1404714..1405541) /locus_tag="lmo1379" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site" /codon_start=1 /transl_table=11 /product="sporulation protein SpoJ" /protein_id="NP_464904.1" /db_xref="GeneID:987847" /translation="MKKKNIILISVLLGALLLLTGCSMDPSQNTDGFFSTYLIQPFTS FIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQA RLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIA SHTFLWFNLGSPDMVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMILFVS FTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHPEIKVMEQEEKEFEQIVEEQKKEK" misc_feature complement(1404756..1405541) /locus_tag="lmo1379" /note="membrane protein insertase YidC; Region: PRK01622" /db_xref="CDD:179310" regulatory complement(1405553..1405558) /regulatory_class="ribosome_binding_site" gene complement(1405578..1405859) /locus_tag="lmo1380" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987834" CDS complement(1405578..1405859) /locus_tag="lmo1380" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1380" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464905.1" /db_xref="GeneID:987834" /translation="MISILQILLEPEFISLTVTFLLMLTIFSYWSAITLLKPKMVLPA DAICIKPVKISLRAHFYRTSPNFVINWLAITRKCSAITDDEDSFSFSNV" regulatory complement(1405871..1405876) /regulatory_class="ribosome_binding_site" gene complement(1405945..1406226) /locus_tag="lmo1381" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987841" CDS complement(1405945..1406226) /locus_tag="lmo1381" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1381; catalyzes the hydrolysis of acylphosphate" /codon_start=1 /transl_table=11 /product="acylphosphatase" /protein_id="NP_464906.1" /db_xref="GeneID:987841" /translation="MARDTAILRVTGFVQGVGFRYTTKHVAYKYDISGTVKNLDDGSV EIHAIAEEENLNKFIDAIKKGPSPGCRIEHVYIYKGAPVEERKTFDIVY" misc_feature complement(1405948..1406226) /locus_tag="lmo1381" /note="acylphosphatase; Provisional; Region: PRK14443" /db_xref="CDD:172919" regulatory complement(1406237..1406242) /regulatory_class="ribosome_binding_site" regulatory 1406353..1406358 /regulatory_class="ribosome_binding_site" gene 1406366..1406713 /locus_tag="lmo1382" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987840" CDS 1406366..1406713 /locus_tag="lmo1382" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1382" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464907.1" /db_xref="GeneID:987840" /translation="MTKWNVYLTKGEYEPWWFFEEWETSIQEDFSFSDKEAAFLKYQE LAEALLSNYPKHQTKKDCLLAAWNEEEVEYCEDCEDDIQTFHGLILFFEGEVYQPTPE EKETIFKRVLTFA" misc_feature 1406375..1406671 /locus_tag="lmo1382" /note="Uncharacterized conserved protein, DUF1033 domain [Function unknown]; Region: COG4699" /db_xref="CDD:443734" regulatory 1406728..1406733 /regulatory_class="ribosome_binding_site" gene 1406742..1407818 /locus_tag="lmo1383" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987838" CDS 1406742..1407818 /locus_tag="lmo1383" /EC_number="5.3.3.2" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate" /codon_start=1 /transl_table=11 /product="isopentenyl pyrophosphate isomerase" /protein_id="NP_464908.1" /db_xref="GeneID:987838" /translation="MQKNDDLLRERRKDEHVALGVKQNEQLAPSSLKDIQLIGTSIPR YNVKDIDLTTTIFGKNVPFPFYINAMTGGSRHTKKINAELAEIAREVAIPMAVGSQSA ALKNSSLIDTYNIVREINPNGMILANVSPEVAIQDGLQAIEMLEANALQIHINPAQEL VMQEGDRSFSHWLTRIEEYVKLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKG GTNFAQIENDRRRDQAYDFLLDWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIIK ALALGADSVGMAGQIIYSLKKEGVTKTIEKLELWKEQLRGLFVLANAKNIAELKTTPL IVSGELAKWGTLREINLVKLANRK" misc_feature 1406772..1407755 /locus_tag="lmo1383" /note="isopentenyl-diphosphate delta-isomerase, type 2; Region: IPP_isom_2; TIGR02151" /db_xref="CDD:273999" misc_feature order(1406853..1406864,1406871..1406873,1407201..1407203, 1407312..1407314,1407321..1407326,1407336..1407338, 1407468..1407470,1407492..1407494,1407555..1407560, 1407666..1407668,1407675..1407677) /locus_tag="lmo1383" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:239205" misc_feature order(1406949..1406960,1407036..1407038,1407123..1407125, 1407198..1407200,1407309..1407311,1407534..1407542, 1407606..1407608) /locus_tag="lmo1383" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:239205" misc_feature order(1406955..1406957,1406976..1406981) /locus_tag="lmo1383" /note="homodimer contacts [polypeptide binding]; other site" /db_xref="CDD:239205" misc_feature order(1407036..1407038,1407123..1407125,1407198..1407200, 1407309..1407311,1407534..1407536,1407603..1407608) /locus_tag="lmo1383" /note="putative active site [active]" /db_xref="CDD:239205" misc_feature order(1407123..1407125,1407129..1407131,1407198..1407200) /locus_tag="lmo1383" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:239205" regulatory 1407822..1407849 /regulatory_class="terminator" regulatory complement(1407822..1407849) /regulatory_class="terminator" gene complement(1407859..1408818) /locus_tag="lmo1384" /db_xref="GeneID:987831" CDS complement(1407859..1408818) /locus_tag="lmo1384" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464909.1" /db_xref="GeneID:987831" /translation="MSDYQVLLYYKYTTIDDPETFAKEHLAACKEMELKGRILVATEG INGTVSGTVEATNKYMDYMANDARFADMVFKIDAADAHAFKKMHVRPRAEIVSLSLEE DVNPLEVTGTYLEPSEFREALLDEDTVILDARNDYEFDIGHFRGAVRPDIQNFRELPG WIEDNREQLADKKIVTYCTGGIRCEKFSGWLKTAGFDDVSQLHGGIATYGKNEETKGE LWDGQMYVFDERIAVPINQVNPTIVGKDYFDGTPCERYINCANPYCNKQILASVENEK KYLRSCSHDCRVHPANLYTKNLSKEEFTERLQAINESSPEMVQ" misc_feature complement(1407877..1408818) /locus_tag="lmo1384" /note="rhodanese-related sulfurtransferase; Region: PRK00142" /db_xref="CDD:234663" misc_feature complement(1408285..1408287) /locus_tag="lmo1384" /note="active site residue [active]" /db_xref="CDD:238776" regulatory complement(1408827..1408832) /regulatory_class="ribosome_binding_site" regulatory 1409055..1409062 /regulatory_class="ribosome_binding_site" gene 1409070..1409996 /locus_tag="lmo1385" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987832" CDS 1409070..1409996 /locus_tag="lmo1385" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464910.1" /db_xref="GeneID:987832" /translation="MSYVQINESFMEELALKKVKQERRKRLKWFVYKFLMITFGAILM GVGLELFLVNNRILDGGVVGISIIISQLTPLPLGVLTFVLNIPFFIIGYRKIGKVFAL FTLYGIAVMSIVTLVLHDMDPVTDDLLLATVFGGMTLGLGVGLVIRNGGALDGTEIIS IIINGRTPFSTGQIIMFINIVIFIVAGLVFNWDRAMYSLITYFLAYKVIDIVIQGVDE SKSAFIISRYYEEIGAEIMEQLGKGVTYLDATGGYSGDVRKVVFVIVSRFEEVKVKAI LDEIDPDAFLAVGGSMSEVRGGKLMNTKTPHL" misc_feature 1409136..1409963 /locus_tag="lmo1385" /note="Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains [Function unknown]; Region: YitT; COG1284" /db_xref="CDD:440895" regulatory 1410134..1410139 /regulatory_class="ribosome_binding_site" gene 1410148..1412421 /locus_tag="lmo1386" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987830" CDS 1410148..1412421 /locus_tag="lmo1386" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA translocase" /protein_id="NP_464911.1" /db_xref="GeneID:987830" /translation="MATQKKKTSGRKKSSTRSKKKQSASFRLEITGVILIAIGVIGLL QLGFVGRGFFALAEMFVGLLSYVLLAGSVILGGYMVIRRKMPHLFSKRLVGIYLIVLG FLTYIHMYFIIHNLGANASVVSSTWKLVLENLFRPNQVGFVGGGMIGAAITSITYFLL DRLGTNLIAVLLIIYGFSLVSGISIRQFFSKIAEFVRYLFTKGKVATEKGKEVKAKRD KKKAEKIVDVEPDEVIDVIEPLQEEKTPPIISNFSSKVEQEKAPVEEKISQKEQDLEM FQQESFENEIYQLPPVDILAPAKVTDQSKEYDQIKVNAKKLEDTFESFGVKAKITQVH LGPAVTKYEVQPSVGVKVSKIVSLSDDIALALAAKDIRIEAPIPGKSAIGIEVANQNV AMVSLREVLENNPKNNPDEKLQIALGRDISGEAMMANLDKMPHLLVAGATGSGKSVCI NGIITSILLRAKPHEVKMMMIDPKMVELNVYNGIPHLLAPVVTNPKKAAQALQKVVAE MERRYDLFSHTGTRNMQGYNDYVKKHNELNEEKQPELPFIVVIVDELADLMMVASNDV EDAITRLAQMARAAGIHLIIATQRPSVDVITGVIKANIPSRIAFAVSSSIDSRTILDM GGAEKLLGRGDMLLLPVGSSKPTRIQGAFLSDAEVEDVVNYVISQQKAQYSEEMIPDD IPEVEGEVTDELYHEAVELVVEMQTASVSMLQRKFRIGYNRAARLIDEMEQRGVVGPH EGSKPRRVNVEVSPEHE" misc_feature <1410310..1410723 /locus_tag="lmo1386" /note="4TM region of DNA translocase FtsK/SpoIIIE; Region: FtsK_4TM; pfam13491" /db_xref="CDD:463896" misc_feature <1410991..1412397 /locus_tag="lmo1386" /note="DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, chromosome partitioning]; Region: FtsK; COG1674" /db_xref="CDD:441280" regulatory 1412427..1412449 /regulatory_class="terminator" regulatory complement(1412427..1412449) /regulatory_class="terminator" gene complement(1412455..1413294) /locus_tag="lmo1387" /db_xref="GeneID:987829" CDS complement(1412455..1413294) /locus_tag="lmo1387" /EC_number="1.5.1.2" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of L-proline from pyrroline-5-carboxylate" /codon_start=1 /transl_table=11 /product="pyrroline-5-carboxylate reductase" /protein_id="NP_464912.1" /db_xref="GeneID:987829" /translation="MAKIGFIGFGSMASLIATKIIETEVATPEEIILYSNSKNEHFNQ FYTKYPTAELADNEAEIFTKADHSFVCKLPLAVLPLMKDCAAVLTPDRHVVSIAAGVS TSDIIEITPGLQVSKLIPSLTTAVNVGTTLIAHAETVNQTNTSWLETTFEHFGHVMTI REENMDIASDLTSSSPGIIAAIFEQFVEAALRRSSLSDAEVFQMINFALAGTSKLLVE EDYTFSGLIQRVATKDGTTAEGVELSKAQLPNFFDELLDRTQNKYASSEKEIQAQKRE LLS" misc_feature complement(1412464..1413294) /locus_tag="lmo1387" /note="pyrroline-5-carboxylate reductase; Reviewed; Region: PRK06928" /db_xref="CDD:235888" regulatory complement(1413302..1413307) /regulatory_class="ribosome_binding_site" regulatory 1413631..1413636 /regulatory_class="ribosome_binding_site" gene 1413646..1414719 /gene="tcsA" /locus_tag="lmo1388" /db_xref="GeneID:984815" CDS 1413646..1414719 /gene="tcsA" /locus_tag="lmo1388" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="CD4+ T cell-stimulating antigen, lipoprotein" /protein_id="NP_464913.1" /db_xref="GeneID:984815" /translation="MKKRTFALALSMIIASGVILGACGSSSDDKKSSDDKSSKDFTVA MVTDTGGVDDRSFNQSAWEGLQKFGKANDMEKGTDGYNYLQSASEADYKTNLNTAVRS DYDLIYGIGYKLKDAIEEVSKQKPKNQFAIVDDTIDDRDNVVSIGFKDNDGSYLVGVV AGLTTKTNKVGFVGGVKGTVIDRFEAGFTAGVKAVNPNAQIDVQYANDFAKADKGQQI ASSMYSSGVDVIFHAAGGTGNGVFAEAKNLKKKDPSRAVWVIGVDRDQWDEGKVTAND GKDYNVTLTSEIKRVDIAVEDLATRAKAGDFPGGTKIEYGLDKDAVGLSEHQDNISKD VLAKVEEYKQKIVDGDIKVPEKP" misc_feature 1413766..1414707 /gene="tcsA" /locus_tag="lmo1388" /note="Lipoprotein Med, regulator of KinD/Spo0A, PBP1-ABC superfamily, includes NupN [Signal transduction mechanisms]; Region: Med; COG1744" /db_xref="CDD:441350" regulatory 1415138..1415143 /regulatory_class="ribosome_binding_site" gene 1415152..1416693 /locus_tag="lmo1389" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984826" CDS 1415152..1416693 /locus_tag="lmo1389" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter ATP-binding protein" /protein_id="NP_464914.1" /db_xref="GeneID:984826" /translation="MDFVIEMLGIRKEFSGFVANDNITLQLKQGEIHALLGENGAGKS TLMNVLFGLYEPDGGEIRVRGTKENINSPNKANELGIGMVHQHFMLVDKFTVAENIIL GKEPSKLGVIEKKKAIEEIKEISDRYGLRVDPNAIVRDISIGMQQRVEILKTLYRGAD ILIFDEPTAVLTPQEIKELIQIMRSLIKEGKSIILITHKLKEIMDVCDRVTVIRRGKG MGTVNVPETTPQDLANLMVGREVVFTTEKIDANPGKDVLEVKDLVVKESRGVESVRGL NLTVRAGEIVGIAGVDGNGQSELISAIAGLSKVTSGSILLNGEHIENKKPRKITEAGL GHIPEDRHKHGLVLEMSLGENIALQTYYKKPISSKGFLNHKAMYDFARELIEEYDVRA SSEYVAAKSLSGGNQQKAIIAREIHRNPDFLIAAQPTRGLDVGAIEFIHRRLIEQRDN GKAVLLMSFELDEIMNVSDRIAVIYEGKIVAIVDPKETTEQELGLMMAGSSKQEAEMG EKEHV" misc_feature 1415152..1416660 /locus_tag="lmo1389" /note="ABC-type guanosine uptake system NupNOPQ, ATPase component NupO [Nucleotide transport and metabolism]; Region: NupO; COG3845" /db_xref="CDD:443055" regulatory 1416674..1416679 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1389" gene 1416686..1417738 /locus_tag="lmo1390" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984893" CDS 1416686..1417738 /locus_tag="lmo1390" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_464915.1" /db_xref="GeneID:984893" /translation="MSKRLQALVIPVTAVILGLICGAIIMLIFGYDPIAGYSALIEGV IGENFYIGETIRQATPYILVGLSVAVAFKAGLFNIGAEGQMLMGWLGSIIIAVNFDGL TKWIHLPLAIITGMVFGALWAFIPGILKATLRVNEVIVTIMLNYTALYIFNYVVQNLL TDGLDKTQEIHASASLQSELLQSLTDYSSLHWGILIALGFALIIWLMLNKTTFGYEIE AVGFNENASQYAGMSVKKTIIFSMVIAGALAGLGGVMEGLGTYGTAYVLTSSPGIGFD GIAVALLGGSSPIGIVFSAILFGALKVGALNMPAVAGVPNELVNVIIALIIFFVASSY IIRWAMAKFKKGAKAE" misc_feature 1416695..1417735 /locus_tag="lmo1390" /note="ABC-type guanosine uptake system NupNOPQ, permease component NupP [Nucleotide transport and metabolism]; Region: NupP; COG4603" /db_xref="CDD:443653" regulatory 1417719..1417724 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1390" gene 1417735..1418685 /locus_tag="lmo1391" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986482" CDS 1417735..1418685 /locus_tag="lmo1391" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_464916.1" /db_xref="GeneID:986482" /translation="MTAILATIVSSTLLMAGPLIFTALGGVYSERGGVVNIGLEGMMV MGAFSAIVFNLTFQDTFGNLTPWISLIAAMVVGGLFSLVHAVATINFRADHVISGVAI NFLATGLSLFLVKVIYDKGQTDQIKYYFGKPDIPVLSDIPVIGDIFFKNIPVMSYVAI IFAIVSWFIIYKTRFGLRLRSVGEHPLAADTMGIKVRWMRYQGVIISGILGGLGGAVY AQSFTLDFGHATISGQGYMALAAMIFGKWNPLGAMGAAIFFGFAQCLAITGGSLPFFK DIPDVYLQIAPYVLTILALVGFIGKSEAPKADGVNYIKGK" misc_feature 1417741..1418682 /locus_tag="lmo1391" /note="ABC-type guanosine uptake system NupNOPQ, permease subunit NupQ [Nucleotide transport and metabolism]; Region: NupQ; COG1079" /db_xref="CDD:440697" regulatory 1418696..1418730 /regulatory_class="terminator" regulatory 1418791..1418796 /regulatory_class="ribosome_binding_site" gene 1418803..1420095 /locus_tag="lmo1392" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986324" CDS 1418803..1420095 /locus_tag="lmo1392" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidase" /protein_id="NP_464917.1" /db_xref="GeneID:986324" /translation="MTDKIFQEKVGPVALTIVPTQKYKSNKIVFKFRAPLERETVTKR ALLSILLETNSEKYPTQTDFRKQLANLYGANFYTTTAKKGNEHVLTVIFDMIDGQYVS DGNHILEDAFAFMEQALFRPNVANDAFNEETLTREKENLKSSLEGIYDDKIRFASKRL VEEMFRDDEFRFGSAGVLEDIDAITAKDLYEYYLQFIAEDTIEIFICGDVTKEEVMPL IEKMAFSPRPERKGIFYTKEAPKEVRVIHEQQAINQGKLVLGYQTETLFGDDDFVALQ LANGLLGGFANSKIFINVREKASLAYYASSRIDSFKGYMIISAGIDEVNYEQALKIIE EQVVAMKQGNFTDDELNQTKEMLINQLLETNDQAQGLIELVYNNVLRDANLDLENWIA KIKQATKEEVVAAINKIKPDTIYFLSKGGEELHGKNHI" misc_feature 1418965..1420038 /locus_tag="lmo1392" /note="Predicted Zn-dependent peptidase, M16 family [General function prediction only]; Region: PqqL; COG0612" /db_xref="CDD:440377" regulatory 1420062..1420067 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1392" gene 1420076..1421362 /locus_tag="lmo1393" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986760" CDS 1420076..1421362 /locus_tag="lmo1393" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidase" /protein_id="NP_464918.1" /db_xref="GeneID:986760" /translation="MEKITFEQVKEAVFHEKMANGLQVYLLPKQGFSKTYAVFTTNYG AIDNNFVPIGETEFTKVPDGIAHFLEHKMFEKEDGDVFFKFGEKGAFTNAFTSFTKTA YLFSSTSRVEENLETLIDFVQEPYFTEETVEKEKGIIGQEIRMYDDDPDFRAYFGVIE NMYHNHPVKIDIAGTVESIAEINKDLLYLCYNTFYHPSNMVLFVVGNLEPEQMMDQIR ANQAKKEFAEAAPIKRHFPEEPKTVAVKERKIHFPVQIAKNLVGIKEDIGSLEGQAAI KQEIIGDVALEMLFGTTSATYLKLYNEGIIDDTFGYDYTLQDSFSFVLVGGDAKDPDK QTAKIKDAIKEAAKNGLNESDLALVKRKRIGQFLRSLNSPEFIANQFSQYVMKSASLF DILPLMEKVTLEEVNAFVKNLDKEERTTSFQLLPEE" misc_feature 1420079..1421359 /locus_tag="lmo1393" /note="Predicted Zn-dependent peptidase, M16 family [General function prediction only]; Region: PqqL; COG0612" /db_xref="CDD:440377" regulatory 1421438..1421443 /regulatory_class="ribosome_binding_site" gene 1421454..1422185 /locus_tag="lmo1394" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984737" CDS 1421454..1422185 /locus_tag="lmo1394" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="3-ketoacyl-ACP reductase" /protein_id="NP_464919.1" /db_xref="GeneID:984737" /translation="MDKEIKYAFVTGASGEIGQAICMSLARAGWNLYLHYYQNKETVE KLLPLLQAEEVDVILIQADFDDLASLTEIEKQVFQLDAFIHAAGHAHYSLFQDTTDTN IAELWNVHMFMPMRLIRTFMPKLMKSSQGRIIFISSIWGEVGASMEVAYSTVKGAQIA FCRALSQEVGLSGITVNAVTPGVVETKMMDQFSEEEKDNLRQEIPLNRFAQPEEIAET VAFLTSKKASYITGEVLRLNGGWLM" misc_feature 1421454..1422179 /locus_tag="lmo1394" /note="3-ketoacyl-(acyl-carrier-protein) reductase; Provisional; Region: fabG; PRK05565" /db_xref="CDD:235506" regulatory 1422221..1422226 /regulatory_class="ribosome_binding_site" gene 1422236..1423165 /locus_tag="lmo1395" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986796" CDS 1422236..1423165 /locus_tag="lmo1395" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464920.1" /db_xref="GeneID:986796" /translation="MTELGDKLKQARREKGLSLDDLQQITKIQKRYLVAIEEGNYAVM PGKFYARAFIKQYAEAVGLDSATLFDEFESEVPETPQQEVVNNEPTRVQSKRNPMPAQ SVGNQANTRNRFFDILPKILIALFIVFILFIVWFFLLNKQDNSTEKVKTDTNNPTVKV EDSTKSKDTSKDTEKKDTTTNEDKSTETKDKKEDTAKEVEVTKGETSGNATTYTVKNT DKMTLSLSATGDSWIGVSDANGSTIQNETLSTQNPSAEIDLGDNKTVSIVIGNSPVTT VKINGKQLELAPDLVKQVLTINLEASDSSSDAE" misc_feature 1422236..1422442 /locus_tag="lmo1395" /note="Cytoskeletal protein RodZ, contains Xre-like HTH and DUF4115 domains [Cell cycle control, cell division, chromosome partitioning]; Region: RodZ; COG1426" /db_xref="CDD:441035" misc_feature 1422611..>1422895 /locus_tag="lmo1395" /note="endonuclease 4-like protein; Provisional; Region: PTZ00372" /db_xref="CDD:240388" misc_feature 1422905..1423102 /locus_tag="lmo1395" /note="Domain of unknown function (DUF4115); Region: DUF4115; pfam13464" /db_xref="CDD:433229" regulatory 1423173..1423208 /regulatory_class="terminator" regulatory 1423242..1423247 /regulatory_class="ribosome_binding_site" gene 1423255..1423833 /locus_tag="lmo1396" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985296" CDS 1423255..1423833 /locus_tag="lmo1396" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphatidylglycerophosphate synthase" /protein_id="NP_464921.1" /db_xref="GeneID:985296" /translation="MNLPNKLTVIRIFMIPIFVILCVVPFDWGSVTWLDSTIPVTSLV ATIIFIVAALTDWFDGHLARKYNLITNFGKFADPMADKLLVAAAFIILVEMHIAPSWV VILIISRELAVTGLRLLLVEGGEVLAAGQLGKIKTFTQMIAIPLMLLNNFPFAWTGIR VDLVFLYVCAFFAVWSGIDYFYKNRGVFKGSM" misc_feature 1423255..1423821 /locus_tag="lmo1396" /note="CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Region: PRK10832; cl00453" /db_xref="CDD:469774" regulatory 1423846..1423861 /regulatory_class="terminator" regulatory 1423887..1423892 /regulatory_class="ribosome_binding_site" gene 1423902..1425146 /gene="cinA" /locus_tag="lmo1397" /db_xref="GeneID:987615" CDS 1423902..1425146 /gene="cinA" /locus_tag="lmo1397" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence damage-inducible protein CinA" /protein_id="NP_464922.1" /db_xref="GeneID:987615" /translation="MASAEIIAVGTELLLGQIVNSNAAFISQELAADGIYVYHHTVVG DNPTRLKEVIEIAEKRSDILIFTGGLGPTEDDITKQILADHLQKQLVEDEYHMNKINE YFASRNRTMTENNKLQAVIIKDSVVLNNDYGFAAGMYLKENNHTYVLLPGPPSEMKPM FTKYANPLLLSENGNQNILESKIMRFFGIGESQLAADLNDLIVNQVNPTIATYAGDNE VVVRITATAKTKEEASSLVKDTEEEILRRDGTFLYGYGEVSLPELVTAMLLEKELTIS AAESFTAGLFQAEIARFPGISKIFKGGMVTYSEETKQSILQVSPQVIKEKGVVSAECA KEMAENVSRLCKTDIGISFTGVAGPDSLEGHPAGTIWIGLSVKGHETEAFQFVYGRDR NHNRRRAVKQGFQLIKQFLDAN" misc_feature 1423905..1425143 /gene="cinA" /locus_tag="lmo1397" /note="competence damage-inducible protein A; Provisional; Region: PRK00549" /db_xref="CDD:234789" regulatory 1425406..1425411 /regulatory_class="ribosome_binding_site" gene 1425419..1426465 /gene="recA" /locus_tag="lmo1398" /db_xref="GeneID:984485" CDS 1425419..1426465 /gene="recA" /locus_tag="lmo1398" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs" /codon_start=1 /transl_table=11 /product="recombinase A" /protein_id="NP_464923.1" /db_xref="GeneID:984485" /translation="MNDRQAALDQALKQIEKQFGKGSIMKLGEHSDQNISTISSGSLA LDIALGVGGYPRGRIIEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYA KNLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDA HVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEITPGGRALKFYST VRLEVRRAEQLKQGTDVMGNKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMA AEVDVINKSGSWYSYKEERIGQGRENAKQYLKEHTDIRDEISKRVREEYEIDGSSKEP LDEKEETLSLLDDE" misc_feature 1425419..1426441 /gene="recA" /locus_tag="lmo1398" /note="recombinase A; Provisional; Region: recA; PRK09354" /db_xref="CDD:236476" regulatory 1426478..1426518 /regulatory_class="terminator" regulatory 1426753..1426758 /regulatory_class="ribosome_binding_site" gene 1426766..1428328 /locus_tag="lmo1399" /db_xref="GeneID:984906" CDS 1426766..1428328 /locus_tag="lmo1399" /experiment="EXISTENCE:[PMID:19448609]" /note="protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP" /codon_start=1 /transl_table=11 /product="phosphodiesterase" /protein_id="NP_464924.1" /db_xref="GeneID:984906" /translation="MTIAITIISSLLFLIVGLVVGSLIFKSSTEKKLAAARGTAELIV EDAKKEAETTKKEALLEAKEENHRLRTEIENELRGRRTETQKAENRLLQREENLDRKD TSLSKREATLERKEESISKRQQQIEEKESKLAEMIQAEQTELERISALSKEEAKSIIL NQVEEELTHDTAIMVKESENRAKEESDKKAKNILSLAIQRCAADHVAETTVSVVTLPN DEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPIRREIARIALEKLVQD GRIHPARIEEMVDKARKEVDEHIREVGEQATFEVGIHSIHPDLIKILGRLRYRTSYGQ NVLNHSLEVSKLAGILAGELGEDVTLAKRAGLLHDIGKAIDHEIEGSHVEIGVELATK YKENDVVINSIASHHGDTEATSVIAVLVAAADALSAARPGARSETLENYIRRLEKLEE ISESYDGVEKSYAIQAGREVRIIVEPDTIDDLSSYRLARDIRKRIEEELDYPGHIKVT VIRETRAVEYAK" misc_feature 1426766..1428325 /locus_tag="lmo1399" /note="phosphodiesterase; Provisional; Region: PRK12704" /db_xref="CDD:237177" regulatory 1428338..1428368 /regulatory_class="terminator" regulatory 1428428..1428433 /regulatory_class="ribosome_binding_site" gene 1428442..1428939 /locus_tag="lmo1400" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986455" CDS 1428442..1428939 /locus_tag="lmo1400" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="N-acetyltransferase" /protein_id="NP_464925.1" /db_xref="GeneID:986455" /translation="MSEWKILPMQKEHYSGVAAVHQEGIETGNATFQEKTLSLEAFDE KYLNTCRLVVLMNGEVIGWAALLPFSSMHAYRGVAELSIYIAKSARGKGVGKALMHEI IQTSEQNDFWTLQSLIFPENKASIALHHTYGFQTLCIHEKLGEMNGVFRDVALLERRS NRNGE" misc_feature 1428448..1428918 /locus_tag="lmo1400" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" regulatory 1428930..1428935 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1400" gene 1428945..1429748 /locus_tag="lmo1401" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986807" CDS 1428945..1429748 /locus_tag="lmo1401" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464926.1" /db_xref="GeneID:986807" /translation="MKILFIGDVVGSIGRDAITEYLPQLKKKYKPTITVINGENAASG RGITEKIYKDFLELGANAVTLGNHTWDNRDIFEFIDEAKYLVRPANFPDDTTPGTGMV FVKSNQHEIAVINMQGRTFLADLDDPFRKMDYLIEEAKKRTNIIFVDFHAETTSEKEA MGWYLDGRVTAVVGTHTHVQTSDNRILPEGTAYLTDTGMTGPYDAILGMEKEAVIRRF KTALPTRFEVPKTGRAVLSGCLITLDESTGKAQKIDRILINEDHPFSFD" misc_feature 1428945..1429742 /locus_tag="lmo1401" /note="2',3'- and 3',5'-cNMP phosphodiesterase YmdB, calcineurin family [Signal transduction mechanisms]; Region: YmdB; COG1692" /db_xref="CDD:441298" regulatory 1429752..1429757 /regulatory_class="ribosome_binding_site" gene 1429765..1430127 /locus_tag="lmo1402" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986490" CDS 1429765..1430127 /locus_tag="lmo1402" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464927.1" /db_xref="GeneID:986490" /translation="MTVSKDEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAK VSKIKLLQKEAVNLEHYQKLEAMKQTENQIDNVRADIDSLPIVTEFRRAQEDANDLLQ SITTEITTKVTTELEKEN" misc_feature 1429765..>1430070 /locus_tag="lmo1402" /note="Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development) [Signal transduction mechanisms]; Region: YmcA; COG4550" /db_xref="CDD:443614" regulatory 1430138..1430166 /regulatory_class="terminator" regulatory 1430223..1430228 /regulatory_class="ribosome_binding_site" gene 1430237..1432819 /gene="mutS" /locus_tag="lmo1403" /db_xref="GeneID:985419" CDS 1430237..1432819 /gene="mutS" /locus_tag="lmo1403" /experiment="EXISTENCE:[PMID:19448609]" /note="This protein performs the mismatch recognition step during the DNA repair process" /codon_start=1 /transl_table=11 /product="DNA mismatch repair protein MutS" /protein_id="NP_464928.1" /db_xref="GeneID:985419" /translation="MTEYTPMIKQYLEIKDKYQDAFLFFRLGDFYEMFFEDALNASQI LEITLTGREGGTKEKIPMCGVPYHSASGYIDTLIEKGYKVAICEQVEDPKTTKGMVKR EVVQLISPGTVMDERGLKAKENNYIASLYCYEGKEYGFAYSDLSTGELKSTVIEASED RLINELTTLSTRELIVSSSEKEVLSDVMKEQLGLTFSVHEEDTIPAENEKLVTRHMSL SEKRAIGKLLHYLKETQKRDLGHLQQAVHYETSNYMKMDYYSKRNLELAESIRGKGRQ GTLLWLLDNTQTAMGGRMLKQWIDRPLIDRKKIIERQNDVSELMAHFFERLELVENLK NVYDLERLAGRVAYGNVNARDLIQLRNSLYQIPRIRATLLSMSSESLTELAEQLDPCE ELTEKLEEAIMDSAPISIREGGIIKDGYNSQLDTYRDASRNGKTWIAELERKERELTG IKTLKVGFNRVFGYYIEVTRANTHLLPEGRYERKQTLTNAERYITPELKEKEKLILDA EEKSMELEYQLFSEVREMVKDYIERLQKLAKSVSEIDCLQSFADISEKNHFIRPTLSE DGSLHVKQGRHPVVEKVMGAQSYVANDCDLDENREILLITGPNMSGKSTYMRQVALTA ICAQVGCFVPAEEAILPIFDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVHATKDSL ILFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFSTHYHELTDLEKELRGLQNIHV SAVEENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQLENDDKKIII ASVKQPEEVHEEVQLSMFPLEPEKKASSKETKLLKEIASMNIMQMTPMDAMNKLYELQ SKIH" misc_feature 1430237..1432813 /gene="mutS" /locus_tag="lmo1403" /note="DNA mismatch repair protein MutS; Provisional; Region: PRK05399" /db_xref="CDD:235444" regulatory 1432826..1432831 /regulatory_class="ribosome_binding_site" gene 1432839..1434644 /gene="mutL" /locus_tag="lmo1404" /db_xref="GeneID:986410" CDS 1432839..1434644 /gene="mutL" /locus_tag="lmo1404" /experiment="EXISTENCE:[PMID:19448609]" /note="This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex" /codon_start=1 /transl_table=11 /product="DNA mismatch repair protein" /protein_id="NP_464929.1" /db_xref="GeneID:986410" /translation="MAKHIVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVI DILVEEAGLNKITIIDNGSGIEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALP SIASVSHLAMETSTGETKGTSISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKY LKSLPTELGNITDILNRLALAHPDISFRFSHNGKPLLQTNGNGDLRQVIAAIYGISIA KKSIPVKAESLDFKISGYAVLPEVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLL PIGRFPIIVLQIEMDPIIVDVNVHPAKLEVRLSKEKELGQLISQMIKEAFHKLQLIPE GEISKKQKEVQKSEQIQMSFEENKPAKEIPTLFSKPTIPEYVPSDEDAPREDDFILET MPPYEPQAEQEEHSKERIPKMYPIGQMHATYIFAQNENGLYIIDQHAAQERIKYEFYR EKIGEVSRELQELLVPIVLEFPADEYVRLEEQKAKLEEVGVFLENFGQNSFIIRAHPT WFPKDQEEEMLREIIDEALSAPSISIHKLREDTAIMMSCKKSIKANHYLTTQDMEALL DTLREASDPFTCPHGRPVIIQYSTYELEKMFKRVM" misc_feature 1432851..1434638 /gene="mutL" /locus_tag="lmo1404" /note="DNA mismatch repair endonuclease MutL; Region: mutL; PRK00095" /db_xref="CDD:234630" regulatory 1434648..1434653 /regulatory_class="ribosome_binding_site" gene 1434661..1435209 /locus_tag="lmo1405" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986841" CDS 1434661..1435209 /locus_tag="lmo1405" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="anti-terminator regulatory protein" /protein_id="NP_464930.1" /db_xref="GeneID:986841" /translation="MELPFSGQSIIPAAHNQKDMEKILELGLTYMVMLETHVAQLKSL VKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLA IQRLFMIDSSACNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETS EQVNQVIASGAIAVTTSNKHLW" misc_feature 1434673..1435206 /locus_tag="lmo1405" /note="Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]; Region: GlpP; COG1954" /db_xref="CDD:441557" regulatory 1435212..1435252 /regulatory_class="terminator" regulatory 1435622..1435627 /regulatory_class="ribosome_binding_site" gene 1435635..1437866 /gene="pflB" /locus_tag="lmo1406" /db_xref="GeneID:986171" CDS 1435635..1437866 /gene="pflB" /locus_tag="lmo1406" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="pyruvate formate-lyase" /protein_id="NP_464931.1" /db_xref="GeneID:986171" /translation="MTEQWYEFAGGNWQQEVDVRDFILKNYRLYDGDDTFLVGPTEAT TKLWDQVMDLTKKERENGGVLDMDTKIVSTITSHDPGYLNKDLEKVVGVQTDVPFKRA LQPFGGIRMAEVAAESYGFKVDEEISHIFSEYRKTHNQGVFDAYTAEMRAARKSGVIT GLPDAYGRGRIIGDYRRVALYGVDFLIKQKKQDLNNTGLRTMSDDVIRQREELNEQIR ALGELKVLGEKHGFDLGRPAKTAQEAFQWLYLGYLAAIKEQNGAAMSLGRTSTFLDIY VERDLRNGLITEEEAQEIVDHFIMKLRLVKFARTPDYNELFSGDPTWVTESIGGITEE GVPLVTKNSFRFLHTLDNLGPAPEPNLTVLWSTHLPSGFKKFCAKMSIKTSAIQYEND DVMRPKWGDDYAIACCVSAMRVGKQMQFFGARANLAKTLLYAINGGIDEKSKAQVGPA YRPIEGDVLDYKEVMEKYDAMMEWIAELYLNTLNVIHYMHDKYAYERIEMALHDTEVL RTMATGIAGLSVAADSLSAIKYATVRPIRDEDGIVVDYEIEGDYPKYGNNDDRVDEIA VELLKTFMTKVRKHKTYRDAVHTTSVLTITSNVVYGKKTGNTPDGRRAGEPFAPGANP MHGRDTKGALASLSSVAKLPYEYGQDGISNTFSIVPKALGREDESQINNLVAMLDGYS TKMGHHLNINVFNRDTLLDAMDHPEEYPQLTIRVSGYAVNFIKLTREQQLDVIHRTMH ESM" misc_feature 1435644..1437854 /gene="pflB" /locus_tag="lmo1406" /note="Pyruvate formate lyase 1; Region: PFL1; cd01678" /db_xref="CDD:153087" misc_feature order(1435962..1435967,1436049..1436054,1436061..1436066, 1436070..1436072,1436085..1436087,1436094..1436099) /gene="pflB" /locus_tag="lmo1406" /note="coenzyme A binding site [chemical binding]; other site" /db_xref="CDD:153087" misc_feature order(1436142..1436144,1436418..1436423,1436583..1436585, 1436601..1436603,1436853..1436855,1436895..1436897, 1436904..1436906,1437411..1437413,1437417..1437419) /gene="pflB" /locus_tag="lmo1406" /note="active site" /db_xref="CDD:153087" misc_feature order(1436853..1436858,1437786..1437788) /gene="pflB" /locus_tag="lmo1406" /note="catalytic residues [active]" /db_xref="CDD:153087" misc_feature 1437777..1437791 /gene="pflB" /locus_tag="lmo1406" /note="glycine loop [active]" /db_xref="CDD:153087" regulatory 1437928..1437933 /regulatory_class="ribosome_binding_site" gene 1437943..1438689 /gene="pflC" /locus_tag="lmo1407" /db_xref="GeneID:986485" CDS 1437943..1438689 /gene="pflC" /locus_tag="lmo1407" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="pyruvate-formate lyase activating enzyme" /protein_id="NP_464932.1" /db_xref="GeneID:986485" /translation="MTEVLGRVHSVETMGTVDGPGIRFIVFMQGCLLRCQFCHNPDTW KIGTGTERSAQDVFDEAIKYKEFWDASGGGVTVSGGEPLLQVDFLIEFFTLCKAAGVH TTIDSCGGCFTRDPEFIEKLDRLMEVTDLILLDIKQINPEKHLKLTTKSNAPIIDFAH YLRDKEQPIWIRHVLIPTKTDDPEDLTKLHEFIQTLPNVKQVDVLPYHTMGVYKWKEM GIRYPLEGIEAPEEEVVALANKILETSSYK" misc_feature 1437961..1438677 /gene="pflC" /locus_tag="lmo1407" /note="pyruvate formate-lyase 1-activating enzyme; Region: PFLA; TIGR02493" /db_xref="CDD:131546" regulatory 1438696..1438718 /regulatory_class="terminator" regulatory complement(1438696..1438718) /regulatory_class="terminator" gene complement(1438724..1439254) /locus_tag="lmo1408" /db_xref="GeneID:986462" CDS complement(1438724..1439254) /locus_tag="lmo1408" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464933.1" /db_xref="GeneID:986462" /translation="MIPNVLEYTLLQMIAREASSGYELANRLRIMQNTHHSQIYPSLS KLEKAGFLVVHKHSQDKKPDKKVYTITQSGLDSLLEWSETPLKIPVTRDEFTTKVQLD WLNNARTKGLIQERESYLKEQLGLIEETLDHFVKLFDLKTKQDKLKNMSYQVYARRLD LIQTELKWCAEMYKIL" misc_feature complement(1438991..1439254) /locus_tag="lmo1408" /note="DNA-binding transcriptional regulator, PadR family [Transcription]; Region: PadR; COG1695" /db_xref="CDD:441301" regulatory complement(1439264..1439269) /regulatory_class="ribosome_binding_site" regulatory 1439403..1439408 /regulatory_class="ribosome_binding_site" gene 1439421..1440614 /locus_tag="lmo1409" /db_xref="GeneID:986419" CDS 1439421..1440614 /locus_tag="lmo1409" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="multidrug transporter" /protein_id="NP_464934.1" /db_xref="GeneID:986419" /translation="MMTDKEMNTGKWITAAASLLAFMGIGVVDPLLPSIAESIGASHS QVEMLFTAYIFTMAIMMIPIGIVAGKMGDKKLIVIGLFIVTIFALLCGLSDTIGALSI FRAGWGFGNSMFMATAMTMLIALSETPGHAIGIYEASMGLGMAFGPLLGGILGNISWR YPFFATACLIFIAFLLILFKVKEPKKVAPAPTEKNEVAIKQMLHLFKYRPFLQIAFSG MFYYYCFFTILAYSPLVLGLSAIQIGFVFFAWGLCLALGSAKVSHALEIRFNSKQILK GSLLACAVILALLGFIDNTAVDIGLIVISGLILGINNALFTTTVMEHSPYARSVTSGA YNFVRWLGAAFAPLCSGLLSEALGMKMPFIVASIICLAGMGLLFIKLKPAHFTLQQST SIKSE" misc_feature 1439451..1440557 /locus_tag="lmo1409" /note="Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; Region: MFS_YfmO_like; cd17474" /db_xref="CDD:341027" misc_feature order(1439481..1439486,1439493..1439498,1439505..1439507, 1439601..1439603,1439751..1439756,1439760..1439768, 1439775..1439777,1439829..1439831,1439838..1439843, 1439850..1439852,1440072..1440074,1440081..1440086, 1440093..1440101,1440108..1440110,1440180..1440182, 1440192..1440194,1440342..1440347,1440357..1440359, 1440369..1440371,1440414..1440416,1440423..1440428, 1440435..1440440,1440447..1440449) /locus_tag="lmo1409" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341027" regulatory 1440623..1440644 /regulatory_class="terminator" regulatory 1440733..1440738 /regulatory_class="ribosome_binding_site" gene 1440748..1441296 /locus_tag="lmo1410" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986496" CDS 1440748..1441296 /locus_tag="lmo1410" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1410" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464935.1" /db_xref="GeneID:986496" /translation="MKLKRLQKMSYFLHIALKILSISSVIMVISVVLMRLFSSKNVMI NKLESDTIFYFQTELFVGEDNLQFVQTEEWILLGVAAFSSIIIAYLLWTASMIFKDLA TNFTPFSNITVSRLRRIAVLMLIYALVPQIIYSILHTVLIPGYSIKFGLNMSFFFALI FYCLTEIFRYGASLQKESDETL" regulatory 1441298..1441303 /regulatory_class="ribosome_binding_site" gene 1441313..1441540 /locus_tag="lmo1411" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987025" CDS 1441313..1441540 /locus_tag="lmo1411" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1411" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464936.1" /db_xref="GeneID:987025" /translation="MAIVLRLDRVMADRKISLNQLSQEVGVANVNLSKIKTGKVSAIR FSTLNEICKVLSCQPGDILEYVADDSVENEL" misc_feature 1441316..1441519 /locus_tag="lmo1411" /note="DNA-binding transcriptional regulator, XRE family [Transcription]; Region: YozG; COG3655" /db_xref="CDD:442872" regulatory 1441568..1441573 /regulatory_class="ribosome_binding_site" gene 1441581..1442114 /locus_tag="lmo1412" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986461" CDS 1441581..1442114 /locus_tag="lmo1412" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="modulates DNA topology" /protein_id="NP_464937.1" /db_xref="GeneID:986461" /translation="MDKYNELQTVLKNKEKVLIIGPNGAGKSTFATELGKHYDFEVCH LDKLFWQENWNAVAKADFEDKVDNIMSSKKKYIIDGDYFFNLEKRLEHADLVIWIKIP LFLCVANIIKRRFKYMTNVRPDVTEGCDEKLNLSFLLYALKYNKRSGKQTKELLDNVY DKELFVIDSYKKLKSYC" misc_feature 1441626..1442081 /locus_tag="lmo1412" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature 1441641..1441664 /locus_tag="lmo1412" /note="Walker A/P-loop; other site" /db_xref="CDD:213179" regulatory complement(1442332..1442357) /regulatory_class="terminator" gene complement(1442368..1443687) /locus_tag="lmo1413" /db_xref="GeneID:986489" CDS complement(1442368..1443687) /locus_tag="lmo1413" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan binding protein" /protein_id="NP_464938.1" /db_xref="GeneID:986489" /translation="MKHAKKSLFTFIIFMTILSITFNPFSAKAAPLMLNLPAPQVDQL YIGDDYITGKLQQEVPMHYPGNAAYVLFNNKQYNITDYTVENDVNFRLKLPKTLEAGD TLNYFTITGNVLDPVAYPGQESYKLAGPFSPIEKANIQVNYVDETNQTLATSDTLSGK LGETYTTSPKAIDGYQVKETPTNATGTYTTNTETIQINYVYEKTAVEGANVSVEYINE ATNESIAPTETLSGKIGTTFQAEVKEIDGYELSQVPSNQSGTYTDQTQSVIFKYKKIT TPDEVAKDVTVTYKDTKGNQLADPVILKGDIGSTFETEAKSFKGYKLTKTPSNHSSVF TSDSQEVEYVYSKDDAVITPPVTPVNPDKPIINPVKPVNPATSTVPNKNISKKNTTKT VNQTGKTSTALQLPKTGDSENNLPLIIGVSLLISGVYIFTTRRKRVK" misc_feature complement(1443082..1443267) /locus_tag="lmo1413" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature complement(1442869..1443051) /locus_tag="lmo1413" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature complement(1442653..1442832) /locus_tag="lmo1413" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature complement(1442377..1442478) /locus_tag="lmo1413" /note="LPXTG-motif cell wall anchor domain; Region: LPXTG_anchor; TIGR01167" /db_xref="CDD:273478" regulatory complement(1443696..1443701) /regulatory_class="ribosome_binding_site" regulatory complement(1443817..1443845) /regulatory_class="terminator" gene complement(1443873..1445042) /locus_tag="lmo1414" /db_xref="GeneID:986819" CDS complement(1443873..1445042) /locus_tag="lmo1414" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acetyl-CoA:acetyltransferase" /protein_id="NP_464939.1" /db_xref="GeneID:986819" /translation="MKEVVIIDAVRTPIGKFGGSLKDISAVDLGATALKGVLERANIA PERVDQVIFGNVLQAGLGQNVARQIAIKAGIPYKVPGVTINEVCGSGLKSVMLGRQAI QLGEADIVAVGGTENMSQAPLLLNPELAGEEINPKKLRNSMLIDGLTDVYGEYHMGIT AENVAEKFSVTREEQDEFAHNSQMKAASAQEKKLFEEEIIPVKLPDGSFFEADETIRA NSTLEKLATLKSVFKEGGTVTAGNASGINDGASAIILMSKEKAVAENIPYIATIKVTS EVGVDPALMGYAPYYAVNEALTKGGYSIDEIDLFHLNEAFASQSVAVARDLKIPEEKL NIYGGAIALGHPIGASGARIIASLLNELKHENKHIGVASLCVGGGIGIAIILERA" misc_feature complement(1443915..1445042) /locus_tag="lmo1414" /note="Acetyl-CoA acetyltransferase [Lipid transport and metabolism]; Region: PaaJ; COG0183" /db_xref="CDD:439953" gene 1445192..1446358 /locus_tag="lmo1415" /db_xref="GeneID:986439" CDS 1445192..1446358 /locus_tag="lmo1415" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hydroxy-3-methylglutaryl-CoA synthase" /protein_id="NP_464940.1" /db_xref="GeneID:986439" /translation="MKIGIDKIGFYTPAFYVDMVELAEARNIDPNKFTIGIGQDKMAF APITQDSVTMGANAALQILDEEDLKKIDLVILATESGIDESKAGAVYIHRLLGIQPFS RAIEIKEACYGATAGINLAKDYVAKHPDSKVLVIGSDIARYGLATGGEATQGAGAVAM VIAADPRCITLEDDNVFYTEDIMDFWRPVYSEYACVEGKYSTEQYIHFFQTIWEKYSA KFGKNLEDFAAICFHLPYTKMGKKALDTIIETAPSDVQEKLLENYRLSTLYSRNVGNI YTGSLYLSFISLLDNQPDLQAEDKIGFFSYGSGAVGEFFHGVLQPDYKKYIRKDEHAE LLANRTKLAIPDYETKFKQQLPKDGSIFEVDPASDPAAIVLTGIQEHKRQYIKK" misc_feature 1445198..1446346 /locus_tag="lmo1415" /note="3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade; Region: HMG-CoA-S_prok; TIGR01835" /db_xref="CDD:213655" regulatory 1446364..1446403 /regulatory_class="terminator" regulatory complement(1446373..1446398) /regulatory_class="terminator" gene complement(1446383..1446982) /locus_tag="lmo1416" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986348" CDS complement(1446383..1446982) /locus_tag="lmo1416" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1416" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464941.1" /db_xref="GeneID:986348" /translation="MKRYFIILILPILSIFAAVTMYFSWFQGWLYFYLKHVMATVSHM GYITIGITAILLYFVAVQLVNWKINKALLVFCYIIYFSILLCLLFGKASDTQGFSSDT FGFVDTFLSGNLRVIIVGNVLAFLPIGFLLKKLGFFTALLSAGMLIFAVEGAQYMLHV GFFDTGDVFLNVCGIMLGYIVIRFLSPRKYKELKVKPTS" misc_feature complement(1446440..>1446631) /locus_tag="lmo1416" /note="Glycopeptide antibiotics resistance protein [Defense mechanisms]; Region: VanZ; COG4767" /db_xref="CDD:443799" regulatory complement(1446991..1446996) /regulatory_class="ribosome_binding_site" gene complement(1447052..1448296) /locus_tag="lmo1417" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986745" CDS complement(1447052..1448296) /locus_tag="lmo1417" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464942.1" /db_xref="GeneID:986745" /translation="MAYTKEEKSWIFQDWANSAYSIMITTAILPIYFKGVAANAGIAD TTSTAYWGYANSIGTLLISLLAPILGTIADYQFFKKRFFGIFTAIGIGFTFLLIFIPT DAWLLLLGFYVLSLIGFSGANIFYDAFLIDVTTNDRMDKVSSAGYAYGYLGSCIPFII FIIFQATGILPISDVALVNIGFVMTALWWLFFTIPMWKNVHQIHYIPAVKRPVRTSFK RLFHTISHISEHKNIVIFLIAYFFYIDGVDTIFRMATSYGIDLGISQTTLILILLMTQ LVAFPFTLLYGYLAKRFSAKPLIFTAIFVYIIICIYAVFMKSALDFWILAMLVGTSQG GIQALSRSFFGKIIPKKRSNEFYGFYNIFGKFSAIMGPALMGVITQITGKTQYGVASL IVLFLVGGILFVFVKEKNLENL" misc_feature complement(1447088..1448269) /locus_tag="lmo1417" /note="Bacillus subtilis YxiO, Listeria monocytogenes BtlA, and similar transporters of the Major Facilitator Superfamily; Region: MFS_YxiO_like; cd17482" /db_xref="CDD:341035" misc_feature complement(order(1447193..1447195,1447202..1447207, 1447214..1447219,1447226..1447228,1447274..1447276, 1447286..1447288,1447298..1447303,1447448..1447450, 1447460..1447462,1447541..1447543,1447550..1447558, 1447565..1447570,1447577..1447579,1447835..1447837, 1447844..1447849,1447856..1447858,1447916..1447918, 1447925..1447933,1447937..1447942,1448099..1448101, 1448219..1448221,1448228..1448233,1448240..1448245)) /locus_tag="lmo1417" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341035" regulatory complement(1448306..1448311) /regulatory_class="ribosome_binding_site" gene complement(1448315..1449583) /locus_tag="lmo1418" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986995" CDS complement(1448315..1449583) /locus_tag="lmo1418" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464943.1" /db_xref="GeneID:986995" /translation="MEKHLFVISLDALGALDLKDTTDLPVLRELIKTGTHIQEVETIY PSLTYPAHTSIITGHYPATHGIINNTKVQPEKDSPDWYWYKKAIQVPTLYDLAKEKGM TTAAFLWPVAAKSGIDYNIAEIFPNRFWLTQMMVSLHASSPLFLIDMDRKFGHLRKGI NQPDLDKFLTASVVDTIKAKKPRLLLTHLVDMDSMRHAHGVDSPEAKAALKRHDERLA AIIQAAKEAGIYENTVFAILGDHYQINVTHAIRLNVLFAEQGWITVVDNKITEWNVYA KSCDGSSYIYTKNDLHNQEIQHLLQSMAEIEEILPKEEIVLRGADPDATFMVEGKAGY YFMDDLYGPIYEKVTDEMLGKPGYYKAVHGYSPKKPAYKTTIIFNGPGIKKGDKISNA HLVDEAPTFAHILDLQFPNTAGSVIEAIFE" misc_feature complement(1448360..1449577) /locus_tag="lmo1418" /note="c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily [Signal transduction mechanisms]; Region: AtaC; COG1524" /db_xref="CDD:441133" regulatory complement(1449592..1449597) /regulatory_class="ribosome_binding_site" regulatory complement(1449596..1449640) /regulatory_class="terminator" gene complement(1449647..1450684) /locus_tag="lmo1419" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986497" CDS complement(1449647..1450684) /locus_tag="lmo1419" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464944.1" /db_xref="GeneID:986497" /translation="MKELSLFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSY LITRLENFILRRISIYRQIIVLLLYVLIAAVIIFVFVKYIPVLADQINQLVKFGNTFL TTDSNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSL GKEHLVSFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALW ILGFPQLMTLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHAL ESYVLNPKLMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEE IEQPKDTISHT" misc_feature complement(1449704..1450654) /locus_tag="lmo1419" /note="Predicted PurR-regulated permease PerM [General function prediction only]; Region: PerM; COG0628" /db_xref="CDD:440393" regulatory complement(1450695..1450700) /regulatory_class="ribosome_binding_site" gene complement(1450701..1451597) /gene="murB" /locus_tag="lmo1420" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984666" CDS complement(1450701..1451597) /gene="murB" /locus_tag="lmo1420" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis" /codon_start=1 /transl_table=11 /product="UDP-N-acetylenolpyruvoylglucosamine reductase" /protein_id="NP_464945.1" /db_xref="GeneID:984666" /translation="MNNLQTKFPHIAIKLNEPLSKYTYTKTGGAADVFVMPKTIEEAQ EVVAYCHQNKIPLTILGNGSNLIIKDGGIRGVILHLDLLQTIERNNTQIVAMSGAKLI DTAKFALNESLSGLEFACGIPGSIGGALHMNAGAYGGEISDVLEAATVLTQTGELKKL KRSELKAAYRFSTIAEKNYIVLDATFSLALEEKNLIQAKMDELTAAREAKQPLEYPSC GSVFKRPPGHFAGKLIQDSGLQGHIIGGAQVSLKHAGFIVNIGGATATDYMNLIAYVQ QTVREKFDVELETEVKIIGEDK" misc_feature complement(1450707..1451573) /gene="murB" /locus_tag="lmo1420" /note="UDP-N-acetylmuramate dehydrogenase; Region: murB; PRK13905" /db_xref="CDD:237553" regulatory 1451802..1451807 /regulatory_class="ribosome_binding_site" gene 1451813..1452799 /locus_tag="lmo1421" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984736" CDS 1451813..1452799 /locus_tag="lmo1421" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycine/betaine ABC transporter ATP-binding protein" /protein_id="NP_464946.1" /db_xref="GeneID:984736" /translation="MIRFDNVSKKYSDDKTAAVNNVTLDIKDGEFFVFIGPSGCGKTT TLKMINRLIPLTTGTIYINEKRISDYDIHELRWDIGYVLQQIALFPHMTIEENIAIVP ELKKWSKEKIHDRITELLDSVGLDPESYRHRKPAELSGGEQQRVGVVRALAADPGIIL MDEPFSALDPISRQRLQQDISALQKKIKKTIVFVTHDMQEALALGDRICVMQGGEIVQ VATPQEIMKNPENDFVKDFLASGHAFNTPILEANFTVNDLIEADLFYSYQTSDGTLGI SSTEPVENLVRRIAEEQSIPVTDEAGNYIGTVSNKHVMQFLARHLESSGELV" misc_feature 1451813..1452766 /locus_tag="lmo1421" /note="ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]; Region: OpuBA; COG1125" /db_xref="CDD:440742" regulatory 1452784..1452790 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1421" gene 1452796..1454310 /locus_tag="lmo1422" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986774" CDS 1452796..1454310 /locus_tag="lmo1422" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycine/betaine ABC transporter permease" /protein_id="NP_464947.1" /db_xref="GeneID:986774" /translation="MNTLIDTFTVRKDELFTALVQHIQISFVSLFIAVLIALPLGIYL TRHKRLAEPIIQVAAIFQTIPSLALLGLLIPLVGIGIVPAIIALVIYALLPILRNTYT GIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIMAGIRTAMVLIIGTATLAALIG AGGLGDLILLGIDRNDNSLILLGAIPAALLAILFDFLLRFLEKASFKSTIITISAGIL LTAAIIVVPYFASDKKEITIAGKLGAEPEILINMYKLVIEDETDLKVNVKPNMGKTSF VFNALKSGDIDIYPEFTGTVLETFLKENAKTHDPEEVYTQARDGLAKDFDMTYLKPMK YNNTYALAVSPEFAKENNLEKISDLGPVSDQVKAGFTLEFKDRSDGYKGIQDKYGLTF SNLKTMEPKLRYNAIKSGDINLLDAYSTDSELAQYKLKVLEDDQQLFPPYQGAPLMLT KTLDKYPELKKPLNKLAGKITDDEMRKMNYEVNVNGKSAYTVAKDYLKDQGIIK" misc_feature 1452799..1453407 /locus_tag="lmo1422" /note="ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism]; Region: OpuBB; COG1174" /db_xref="CDD:440787" misc_feature 1453498..1454289 /locus_tag="lmo1422" /note="Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold; Region: PBP2_ChoS; cd13610" /db_xref="CDD:270328" misc_feature order(1453516..1453518,1453522..1453524,1453666..1453671, 1453678..1453680,1453804..1453806,1453810..1453812, 1454047..1454049,1454119..1454121) /locus_tag="lmo1422" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270328" regulatory complement(1454305..1454341) /regulatory_class="terminator" regulatory 1454316..1454341 /regulatory_class="terminator" gene complement(1454347..1455177) /locus_tag="lmo1423" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986759" CDS complement(1454347..1455177) /locus_tag="lmo1423" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1423" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464948.1" /db_xref="GeneID:986759" /translation="MTDKLLKQHKRLLEQQHKLPYTINLDGEVFTIIIYTKLSKVAGV TVLNSQEEPATVKEAEAVVNRIQKYNFYFEYLGKRAHVIKERDSIIAEKIEQTQLILN DNTIFGEKMQPTIDELNLAMEVYKQQQRKMDVYQEDITLLNQKIKMQGEILEEDWESA ENLSIAFAKAAYAQSIYLEATRKNRKQLAKWFHLHQKELPTDKQKALGKMVSVLSDTN AGLVFDQIISLRPLLEEGLMLDHEQSLTQRAAEFNKEFETHCRFYKPNINKVKNLIRQ " misc_feature complement(<1454611..>1454832) /locus_tag="lmo1423" /note="Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning]; Region: MukB; COG3096" /db_xref="CDD:442330" regulatory complement(1455187..1455192) /regulatory_class="ribosome_binding_site" gene complement(1455316..1456662) /locus_tag="lmo1424" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986818" CDS complement(1455316..1456662) /locus_tag="lmo1424" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="manganese transporter" /protein_id="NP_464949.1" /db_xref="GeneID:986818" /translation="MKKDKTERTKQSWRKAQNAPSLSEVNNSVAIPKNAKFFRKLFAF MGPGALIAVGYVDPGNWATSIAGGSEFGYTLLSVILISNILAVLLQSLASKLGIVTGR DLAQASSDHFSKPFGFVLWILAELAIIATDIAEVIGSAIALNLLFGIPLIWGVCITAL DIFLVLFLQHKGFRYIEVIVITLMVTILVCFGAEMVMSHPDMQAIAKGFIPQSEIVTN PAMLYIALGILGATVMPHNLYLHSSIVQTRQYARTKEGKKEAIRFSFIDSTFSLTIAL LINASILILAAAAFYTTGQHNVAGIEDAYKLLNPTLGSSIASTVFAVALLASGQNSTL TGTLAGQIVMEGFLNIRLKPVVRRLLTRVLAIVPAVIITALYGANGINELLIFSQVIL SMQLSFAVIPLVMFTSDKQKMGEFVNPTWLKIISWAVAIFIAVLNIYLLFYTLTSL" misc_feature complement(1455319..1456638) /locus_tag="lmo1424" /note="divalent metal cation transporter MntH; Region: PRK00701" /db_xref="CDD:234815" regulatory complement(1456672..1456677) /regulatory_class="ribosome_binding_site" gene complement(1456775..1457446) /gene="opuCD" /locus_tag="lmo1425" /db_xref="GeneID:984750" CDS complement(1456775..1457446) /gene="opuCD" /locus_tag="lmo1425" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycine/betaine ABC transporter permease" /protein_id="NP_464950.1" /db_xref="GeneID:984750" /translation="MDTLKQLIDYYQTNGSYVMEEFWRHFLMSAYGVIFAAIIAIPLG VYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLGTNTVVLSLFLYSLLPILKN TYTGIRNVDGALLESGKAMGMTKWQVLRLIEMPLALSVIMAGIRNALVIAIGVAAIGT FVGAGGLGDIIVRGTNATNGTAIILAGAIPTAVMAILADVLLGWVERTLNPVKNKRKP LTEAL" misc_feature complement(1456814..1457431) /gene="opuCD" /locus_tag="lmo1425" /note="ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism]; Region: OpuBB; COG1174" /db_xref="CDD:440787" regulatory complement(1457456..1457461) /regulatory_class="ribosome_binding_site" gene complement(1457461..1458387) /gene="opuCC" /locus_tag="lmo1426" /db_xref="GeneID:986463" CDS complement(1457461..1458387) /gene="opuCC" /locus_tag="lmo1426" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycine/betaine ABC transporter substrate-binding protein" /protein_id="NP_464951.1" /db_xref="GeneID:986463" /translation="MKKKFIALFSVLLLTSSLFLSSCSLPGLGGSSKDTIRIGAMATT ESQIVSNILKELIEHDTGLKVEIVNNLGSTIVQHQAMLNGDVDITATRYTGTDLVGPL GEEAIKDPEKALAAVKKGFEERFHQTWFDSYGFANTYVFMVRQDTAKKYNLNTVSDMR KVENELTAGVDNSWMEREGDGYKAFSKAYDIEFKKIFPMQIGLIYTALKNNQMDVALG YSTDGRIPTYNLKLLKDDKKFFPPYDASALATDEILKKHPELKTTINKLKGKISTEEM QKLNYEADGKLKEPSIVAQEFLQKNNYFEGKN" misc_feature complement(1457491..1458285) /gene="opuCC" /locus_tag="lmo1426" /note="Substrate-binding protein OpuCC of ABC-type osmoregulatory transporter and related proteins; the type 2 periplasmic-binding protein fold; Region: PBP2_OpuCC_like; cd13608" /db_xref="CDD:270326" misc_feature complement(order(1457659..1457661,1457731..1457733, 1457971..1457973,1457977..1457979,1458100..1458102, 1458109..1458114,1458259..1458261,1458265..1458267)) /gene="opuCC" /locus_tag="lmo1426" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270326" gene complement(1458389..1459045) /gene="opuCB" /locus_tag="lmo1427" /db_xref="GeneID:985838" CDS complement(1458389..1459045) /gene="opuCB" /locus_tag="lmo1427" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycine/betaine ABC transporter permease" /protein_id="NP_464952.1" /db_xref="GeneID:985838" /translation="MDAIVTFFQENGHNLLVQTWQHLFISLSAVILGIAVAVPTGILL TRSPKVANFVIGVVSVLQTVPSLAILAFIIPFLGVGTLPAIIALFIYALLPILRNTFI GVRGVDKNLIESGRGMGMTNWQLIVNVEIPNSISVIMAGIRLSAVYVIAWATLASYIG AGGLGDFIFNGLNLYRPDLILGGAIPVTILALVVEFALGKLEYRLTPKAIREAREGGE " misc_feature complement(1458413..1459036) /gene="opuCB" /locus_tag="lmo1427" /note="ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism]; Region: OpuBB; COG1174" /db_xref="CDD:440787" regulatory complement(1458396..1458401) /regulatory_class="ribosome_binding_site" /gene="opuCB" /locus_tag="lmo1427" gene complement(1459049..1460242) /gene="opuCA" /locus_tag="lmo1428" /db_xref="GeneID:987882" CDS complement(1459049..1460242) /gene="opuCA" /locus_tag="lmo1428" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycine/betaine ABC transporter ATP-binding protein" /protein_id="NP_464953.1" /db_xref="GeneID:987882" /translation="MLKFEHVTKTYKGGKKAVNDLTLNIDKGEFVCFIGPSGCGKTTT MKMINRLIEPTEGKIFINDKDIMAEDPVKLRRSIGYVIQQIGLMPHMTIRENIVLVPK LLKWSEEKKQERAKELIKLVDLPEEFLDRYPYELSGGQQQRIGVLRALAAEQNLILMD EPFGALDPITRDSLQEEFKNLQKELGKTIIFVTHDMDEAIKLADRIVIMKDGEIVQFD TPDEILRNPANSFVEDFIGKDRLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMK EKRVDTLLVVDEGNVLKGFIDVEQIDLNRRTATSVMDIIEKNVFYVYEDTLLRDTVQR ILKRGYKYIPVVDKDKRLVGIVTRASLVDIVYDSIWGTLEDATENQEEQADSKTTEPE MKQEG" misc_feature complement(1459340..1460242) /gene="opuCA" /locus_tag="lmo1428" /note="ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]; Region: OpuBA; COG1125" /db_xref="CDD:440742" misc_feature complement(1459148..1459477) /gene="opuCA" /locus_tag="lmo1428" /note="Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found associated with the ABC transporter OpuCA; Region: CBS_pair_ABC_OpuCA_assoc; cd04583" /db_xref="CDD:341360" misc_feature complement(order(1459154..1459156,1459163..1459168, 1459172..1459174,1459178..1459180,1459217..1459219, 1459391..1459399,1459463..1459471,1459475..1459477)) /gene="opuCA" /locus_tag="lmo1428" /note="putative ligand binding site II [chemical binding]; other site" /db_xref="CDD:341360" misc_feature complement(1459298..1459477) /gene="opuCA" /locus_tag="lmo1428" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341360" misc_feature complement(order(1459166..1459168,1459211..1459219, 1459283..1459285,1459334..1459336,1459343..1459348, 1459358..1459360,1459397..1459399)) /gene="opuCA" /locus_tag="lmo1428" /note="putative ligand binding site I [chemical binding]; other site" /db_xref="CDD:341360" misc_feature complement(1459154..1459285) /gene="opuCA" /locus_tag="lmo1428" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341360" regulatory complement(1459054..1459059) /regulatory_class="ribosome_binding_site" /gene="opuCA" /locus_tag="lmo1428" regulatory complement(1460252..1460257) /regulatory_class="ribosome_binding_site" regulatory complement(1460502..1460527) /regulatory_class="terminator" gene complement(1460534..1461094) /locus_tag="lmo1429" /db_xref="GeneID:986347" CDS complement(1460534..1461094) /locus_tag="lmo1429" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464954.1" /db_xref="GeneID:986347" /translation="MQNKRLIILLECAIFAAVAMVLSFIPLDIGSSFSISLGMIPMYV IAIRRGFWAAGFAGLLWGLLHFLTGKAYILMPSQAIIEYILAFSFIAFSGVFSKQVRS NLAANQLKKAIEWAWGTMIIGGLARYFWHYVAGVLFWGAYAFQGWGAQLFSIVMNGAS CLGTVLVSGIIISILLKTSPKLFLPK" misc_feature complement(1460543..1461070) /locus_tag="lmo1429" /note="Thiamine transporter protein (Thia_YuaJ); Region: Thia_YuaJ; pfam09515" /db_xref="CDD:430658" regulatory complement(1461105..1461110) /regulatory_class="ribosome_binding_site" gene 1461163..1461273 /locus_tag="lmos51" /db_xref="GeneID:18245146" misc_RNA 1461163..1461273 /locus_tag="lmos51" /product="TPP" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245146" gene complement(1461343..1461726) /locus_tag="lmo1430" /db_xref="GeneID:985738" CDS complement(1461343..1461726) /locus_tag="lmo1430" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464955.1" /db_xref="GeneID:985738" /translation="MDYEQTLQEKVALCLTLQAAKETFPFDKKTHALTVGGKIFALIH LYHGDLYISVKCQPERIDLLRDEYLSIKPGYHLNKKHWITLVINEKYDVEAETEFALI QNSYQLIFDKLPKKAQNTVKFSAND" misc_feature complement(1461373..1461726) /locus_tag="lmo1430" /note="Predicted DNA-binding protein with #double-wing# structural motif, MmcQ/YjbR family [Transcription]; Region: MmcQ; COG2315" /db_xref="CDD:441889" regulatory complement(1461735..1461740) /regulatory_class="ribosome_binding_site" regulatory 1461854..1461859 /regulatory_class="ribosome_binding_site" gene 1461866..1463467 /locus_tag="lmo1431" /db_xref="GeneID:986756" CDS 1461866..1463467 /locus_tag="lmo1431" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_464956.1" /db_xref="GeneID:986756" /translation="MLTVNNVGLRYGDKKLFEDVSIKFLPGNCYGLIGANGAGKSTFL KVLSGELDSQSGNVHIGSGERLAVLRQDHFQYDDELVLNTVIMGHERLYKIMDEKNAI YMKEDFSDEDGIRAAELEGEFAELDGWEAESDAAVLLNGLGIPTDLHGKLMKDLTGGE KVKVLLAQALFGKPDILLLDEPTNHLDIRAIHWLEEFLINFDNTVIVVSHDRHFLNKV CTHIADLDFSKIKLYVGNYDFWYESSQLAQTMMGDRNKKKEEKMKELQDFIARFSANA SKSKQATSRKKMLEKITLEDIQPSSRRYPFIQFKPDREVGNDLLTVTNLSKTIDGVKI LDNLSFSINRNDKVALVGDDEVAKTVLFQILAGEMEPDEGSYKWGITTSQSYFPKDNS EFFEENDMSLVEWLRQFSPEDDSEAFLRGFLGRMLFSGDEVLKKVRVLSGGEKVRCML SKMMLSGSNVLLLDEPTNHLDLESITALNNGLEAFKGAIIFASHDHQLLQTIATRIIN LSKDQFYNKEISYDEYLKEVMNVAE" misc_feature 1461875..1463443 /locus_tag="lmo1431" /note="ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]; Region: Uup; COG0488" /db_xref="CDD:440254" regulatory 1463479..1463502 /regulatory_class="terminator" regulatory complement(1463482..1463499) /regulatory_class="terminator" gene complement(1463506..1464156) /locus_tag="lmo1432" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986495" CDS complement(1463506..1464156) /locus_tag="lmo1432" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1432" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464957.1" /db_xref="GeneID:986495" /translation="MEIWIIAGICAFLIFIAGIVILFFPARRKIGAILTSAGMLLMVG SIIGIIVSFSHYQQVQNDVFNYSSKGTSQATPEETKTYKVNYEDSADNIKKKITTVTV EKKETYSTSASKPVDGSITIALEITNNAAKTLETYPNQGQLEANKLDLNGGDAVLSNF DTTEIKPGETAKGKIIFPVDDLDKVSDITWISYSFLSYLKDSSTPITTETGKIELK" regulatory complement(1464164..1464169) /regulatory_class="ribosome_binding_site" gene complement(1464209..1465549) /locus_tag="lmo1433" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985502" CDS complement(1464209..1465549) /locus_tag="lmo1433" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glutathione reductase" /protein_id="NP_464958.1" /db_xref="GeneID:985502" /translation="MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCV LRGCDPKKVLIGAREARNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASF QEAGIETFFGAASFQDSHSLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFL SLEKLPDSVVFIGGGYISFEFASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIK DEGIHFHFDTDITKIENDGGKLHIKGKDSFSLQTDLIIGATGRMPNIAHLSLENASID YTKKGIVVNEKLQTPNNPHIYACGDVAATKGAPLTPVVSLEAALVAKNVIGVNEKITY PAIPSVVFTSPKLASIGISTEEAKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIED RESGQIKGAHFLSEEADYMINYIAILMKANLTLADLQSVIFAYPSPASDLTALN" misc_feature complement(1464239..1465540) /locus_tag="lmo1433" /note="Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Region: Lpd; COG1249" /db_xref="CDD:440861" regulatory complement(1465557..1465562) /regulatory_class="ribosome_binding_site" regulatory complement(1465597..1465631) /regulatory_class="terminator" gene complement(1465638..1467305) /locus_tag="lmo1434" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984605" CDS complement(1465638..1467305) /locus_tag="lmo1434" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464959.1" /db_xref="GeneID:984605" /translation="MTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPE NELLGIDIVIPDFKYLEENKDRVKAIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIA LAKSALKEHRKLRFKNFHVVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIV YTGDFKFDQSAKDGYASDLSHIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRH AFRMADGRIIVACVASNLIRLQQVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIE EDLIVPLKELKKYSDDEITIIETGNLGEPIQSLQLMTKGNHPQLNIKPGDTVYITTTP SPSLETMMAKTMDMLYKAGAKVLTMSNNLFISGHASQEDLKLMINLLKPRYFVPVHGE YRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKNDKMTAGNRVYSGNTLIDGLGVGDV GNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEIISRGFIYVRESEHLIEESSKVV TKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRRPMILPIIMEV" misc_feature complement(1465641..1467269) /locus_tag="lmo1434" /note="mRNA degradation ribonuclease J1/J2 [Translation, ribosomal structure and biogenesis]; Region: RnjA; COG0595" /db_xref="CDD:440360" regulatory complement(1467314..1467319) /regulatory_class="ribosome_binding_site" gene complement(1467325..1468206) /gene="dapA" /locus_tag="lmo1435" /db_xref="GeneID:986494" CDS complement(1467325..1468206) /gene="dapA" /locus_tag="lmo1435" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate synthase" /protein_id="NP_464960.1" /db_xref="GeneID:986494" /translation="MDLGKVITAMVTPIHPEKDKVCKKRIHHLVNHLIKNGSDGLVIA GTTGESPTLSHDEKIKLFRQVIETNDGRAKLIAGTGSNNTAETIAFTKEVATLGGMDA VLIVAPYYNKPNQDGLYAHFAAVAEASDLPVVIYNIPGRSVVNIEPETIIRLAKLPNI VGVKESSGNLDNISKIIAETSDDFQVYSGDDSLTLPILAVGGNGVISVASHIVGNEMQ EMIQAFERGEVQKAAQIHRELLPLMNGLFSVPNPAPTKYLLNQQGISVGPVRLPLVDL NAEQGTKLQAILEGLSK" misc_feature complement(1467343..1468200) /gene="dapA" /locus_tag="lmo1435" /note="Dihydrodipicolinate synthase (DHDPS); Region: DHDPS; cd00950" /db_xref="CDD:188637" misc_feature complement(order(1467391..1467393,1467397..1467399, 1467451..1467456,1467784..1467786,1467790..1467792, 1467877..1467885,1467955..1467957,1467961..1467963, 1468060..1468074)) /gene="dapA" /locus_tag="lmo1435" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:188637" misc_feature complement(order(1467634..1467636,1467640..1467642, 1467715..1467717,1467784..1467786,1467799..1467801, 1468066..1468071)) /gene="dapA" /locus_tag="lmo1435" /note="active site" /db_xref="CDD:188637" misc_feature complement(1467715..1467717) /gene="dapA" /locus_tag="lmo1435" /note="catalytic residue [active]" /db_xref="CDD:188637" regulatory complement(1468216..1468221) /regulatory_class="ribosome_binding_site" gene complement(1468221..1469432) /locus_tag="lmo1436" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986483" CDS complement(1468221..1469432) /locus_tag="lmo1436" /EC_number="2.7.2.4" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive" /codon_start=1 /transl_table=11 /product="aspartate kinase" /protein_id="NP_464961.1" /db_xref="GeneID:986483" /translation="MKIIVQKFGGTSVQNEKSRLMAFNHIKQVLKEGYKVVVVVSAIG RYGDPYATDTLLELIGAKNTKLTAREQDTLLSVGETISASVFTNMLKEANIKAEAFSG GQAGIITSDDHLNAKITEVDTARLKDALTNLDVAVVAGFQGITANGDISTLGRGGSDT SAAALGVSLQANYIDIFTDVDGMMTADPRIVEHARSLPRVSYNEVSNMAYQGAKVIHP RAVEIAMTAKIPMRIRSTYLESTGTLVTSLADDSGHFDVKERMVTGVAHVTNLTQISV QADTVKAQQLAFKILADAGISLDFINISTNSVIFTVPEEKSHVVKQLLEDADLQTTVR QACAKVSIVGAGITGVPGVTAKIVGALSEKNIPILQSADSHTTIWVLVREKDLISAVN ALHDVFCLEIK" misc_feature complement(1468230..1469432) /locus_tag="lmo1436" /note="aspartate kinase I; Reviewed; Region: PRK08210" /db_xref="CDD:236188" regulatory complement(1469441..1469446) /regulatory_class="ribosome_binding_site" gene complement(1469444..1470487) /locus_tag="lmo1437" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986492" CDS complement(1469444..1470487) /locus_tag="lmo1437" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aspartate-semialdehyde dehydrogenase" /protein_id="NP_464962.1" /db_xref="GeneID:986492" /translation="MTKSYHVAVVGATGAVGTQMIELLEEAATFKIKQVSFLSSIRSA GKKLSFRGEEVTIQEATPESFEGVDIALFSAGGSVSKALAKEAVKRGAIVIDNTSAYR MDPTVPLVVPEVNEKALFSHNGIIANPNCSTIQMVAALEPIREAFGLNRIIVSTYQAV SGSGVSAIQELKDGSKAVLDNKEFTPQIMPVKGDKKHYPIAFNALPQIDVFTENDYTY EEMKMINETKKIMEDNTIKVSATCVRIPVVSGHSESVYIEVDKEGITAKEIQNALKNA PGIVLEDDPANQVYPQAVQAAGKKEVFVGRIRADIDDPKGFHMWIVSDNLLKGAAWNS IQIAESLVKLAII" misc_feature complement(1469462..1470475) /locus_tag="lmo1437" /note="aspartate-semialdehyde dehydrogenase; Provisional; Region: PRK14874" /db_xref="CDD:237845" regulatory complement(1470499..1470504) /regulatory_class="ribosome_binding_site" regulatory complement(1470654..1470677) /regulatory_class="terminator" gene complement(1470685..1472850) /locus_tag="lmo1438" /db_xref="GeneID:986843" CDS complement(1470685..1472850) /locus_tag="lmo1438" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="penicillin-binding protein" /protein_id="NP_464963.1" /db_xref="GeneID:986843" /translation="MKLNFRKKKKDSTKKKRAIIPLRLNILFFIIFILFSVLILRLGI VQIVQGDTYKRQLEETDNVTVSKNVPRGSIYDRNYNLLVGNSAVKSITYTRSQQTQTA ETLHVAQTLEKLITVEPEKLTDRDLKDYWILTHQTESLNRLSAKEQALDSSKAYKIQV DKVTKEDIASLTSEDLKVATIYKKMTTGYAMTESVVKNKDVTDEEIARVSENMDSLPG VDTTTDWNRYYTYDETLRSILGSVSTAKEGLPKDKAEYYLSQGYSRNDRVGKSYLEAQ YESVLAGSKSQSESVLDSKGNIIETVNKYEGSKGKDLVLSVDVEFQKAVEEILQKNIK QGKQYAGSDLFDRAFVVAMDPYSGEVLALAGQKLNDKGEFEDYSLGTFTTAYAMGSAV KGSTILGGIMDGAITNKTVFTDQPIVLKGTKPKSSWFNRTGAGNRPLDPVGALEISSN SYMYQVAMKMGGANYVPNGPLRAPLSTFDDMRYYYNQFGLGVKTGIDLPGEQTGYKGD DQTIGKILDFAIGQYDSYTPLQMAQYVSTIANGGSRIAPSMVKEIRNPSTNGDSVGTL ATANEPKVLNKIGVSESDIKTVQQGFYEVTHGSTGTARTVFTSSDYDVAGKTGTADAF YDGPKEGNKMASVWNTTFVGYAPVEKPEIAISVVVPWIYRPYGTDQKTNMKISKEVFD KYFELKKERSESKKDTSKVEQPINNKEAAAKAQSEQTEN" misc_feature complement(1470781..1472745) /locus_tag="lmo1438" /note="Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis]; Region: FtsI; COG0768" /db_xref="CDD:440531" regulatory complement(1472860..1472865) /regulatory_class="ribosome_binding_site" regulatory complement(1472953..1472970) /regulatory_class="terminator" gene complement(1472980..1473588) /gene="sod" /locus_tag="lmo1439" /db_xref="GeneID:986791" CDS complement(1472980..1473588) /gene="sod" /locus_tag="lmo1439" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="superoxide dismutase" /protein_id="NP_464964.1" /db_xref="GeneID:986791" /translation="MTYELPKLPYTYDALEPNFDKETMEIHYTKHHNTYVTKLNEAVA GHPELASKSAEELVTNLDSVPEDIRGAVRNHGGGHANHTLFWSILSPNGGGAPTGNLK AAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNDGKLEIVSTANQDSPLSDGKTPV LGLDVWEHAYYLKFQNRRPEYIETFWNVINWDEANKRFDAAK" misc_feature complement(1472998..1473579) /gene="sod" /locus_tag="lmo1439" /note="Superoxide dismutase [Inorganic ion transport and metabolism]; Region: SodA; COG0605" /db_xref="CDD:440370" regulatory complement(1473597..1473602) /regulatory_class="ribosome_binding_site" regulatory 1473873..1473878 /regulatory_class="ribosome_binding_site" gene 1473889..1474689 /locus_tag="lmo1440" /db_xref="GeneID:986499" CDS 1473889..1474689 /locus_tag="lmo1440" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464965.1" /db_xref="GeneID:986499" /translation="MNIFKRFWKSLYSPADIASFRNDKIRKSIVYIIVLSFVTFLPLA YFTNVTTKNALKVGEETITNEIPNFKVTDGKLVLTDKNAKNIPISIDQDELHIYFDAS GTLDKDDVDNKIASYDSAVAFLSDSIYITAAGVSQSVSYDTAGISDKADLVHLYNSIE SLAKYFIPIALLVLFIFTLGSVFFRVALYALFGFILSGFGRTGIAFRQNWMIASYSIT LAAVFTMIMEALQIIVPFGMEINMVVSMIFVFLAIRSIPPSEPTILEK" misc_feature 1473898..1474635 /locus_tag="lmo1440" /note="Protein of unknown function (DUF1189); Region: DUF1189; pfam06691" /db_xref="CDD:429073" regulatory 1474696..1474717 /regulatory_class="terminator" regulatory 1474789..1474794 /regulatory_class="ribosome_binding_site" gene 1474802..1475908 /gene="ispG" /locus_tag="lmo1441" /gene_synonym="gcpE" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986437" CDS 1474802..1475908 /gene="ispG" /locus_tag="lmo1441" /gene_synonym="gcpE" /EC_number="1.17.7.1" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis" /codon_start=1 /transl_table=11 /product="4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase" /protein_id="NP_464966.1" /db_xref="GeneID:986437" /translation="MNERIFRENTRPVQVGNLTIGGSEELTIQSMTTTKTHDVEATVA EIHRLEEAGCQIVRVACPDERAANALSAIKKKIHIPLVADIHFDYRLALKAIDAGVDK IRINPGNIGRRDRVEKVVNAAKAKNIPIRIGVNAGSLEKKIIQKYGYPTADGMVESAL AHIKILEDLDFYDIIVSLKASDVNLAIEAYDKASRAFNYPLHLGITESGTQFAGGIKS AAGLGAILSLGIGNTLRVSLSADPVEEIKVAREVLKSFGLSSNAAMLISCPTCGRIEI DLIRIANEVENYIAKIEVPIKVAVLGCAVNGPGEAREADIGIAGSNGEGLLFRHGKII RKVPEAIMIDELKKEIDILAEEFFVKKIDLESLR" misc_feature 1474802..1475884 /gene="ispG" /locus_tag="lmo1441" /gene_synonym="gcpE" /note="4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG/GcpE [Lipid transport and metabolism]; Region: IspG; COG0821" /db_xref="CDD:440583" regulatory 1475930..1475935 /regulatory_class="ribosome_binding_site" gene 1475944..1476651 /locus_tag="lmo1442" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986764" CDS 1475944..1476651 /locus_tag="lmo1442" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_464967.1" /db_xref="GeneID:986764" /translation="MEKENELSFYDGVKACLPTVLGYAGIGIAAGVVGKASHLSLLEV TLLAIIVYAGAAQFIISGLLLLQSPISAIIFTTFLINSRHFLMSMAEAPHFKKYSLWN NIGIGSLLTDETFGVSMNHIGNKKPVSAKWMHGINITAYLAWIVACIVGAFIGNWLPN PEQFGLDFALSAMFIGLLYLQVVSDKSKKMSTSLLVMVLVALFLILFMRVMTPELAIL TATLLGCLMGVILERWR" misc_feature 1475968..1476648 /locus_tag="lmo1442" /note="Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]; Region: AzlC; COG1296" /db_xref="CDD:440907" regulatory 1476624..1476629 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1442" gene 1476642..1476968 /locus_tag="lmo1443" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986175" CDS 1476642..1476968 /locus_tag="lmo1443" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1443" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464968.1" /db_xref="GeneID:986175" /translation="MALSSYTLFVIIGCGLVTFIPRVLPFIFVRKLQLPDVVIRYLSY VPLCILTALFVQSLLITRENSFPGINIENLLASLPTIITAILTKNLMWIVVVGIISMA LIRLFA" misc_feature 1476651..1476962 /locus_tag="lmo1443" /note="Branched-chain amino acid transport protein [Amino acid transport and metabolism]; Region: AzlD2; COG4392" /db_xref="CDD:443518" gene complement(1477050..1477934) /locus_tag="lmo1444" /db_xref="GeneID:986457" CDS complement(1477050..1477934) /locus_tag="lmo1444" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="foldase" /protein_id="NP_464969.1" /db_xref="GeneID:986457" /translation="MTKLKKVMISVIAATLLLLAGCGSSAVIKTDAGSVTQDELYEAM KTTYGNEVVQQLTFKKILEDKYTVTEKEVNAEYKKYEEQYGDSFESTLSSNNLTKTSF KENLEYNLLVQKATEANMDVSESKLKAYYKTWEPDITVRHILVDDEATAKEIQTKLKN GEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYG YHLIQLVKKTEKGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDIKDSDLKD AFADYTSTSSTSSTTTSN" misc_feature complement(1477092..1477928) /locus_tag="lmo1444" /note="peptidylprolyl isomerase; Provisional; Region: prsA; PRK04405" /db_xref="CDD:235295" regulatory complement(1477943..1477948) /regulatory_class="ribosome_binding_site" regulatory complement(1478045..1478061) /regulatory_class="terminator" gene complement(1478071..1478496) /gene="zurR" /locus_tag="lmo1445" /db_xref="GeneID:986176" CDS complement(1478071..1478496) /gene="zurR" /locus_tag="lmo1445" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ZurR family transcriptional regulator" /protein_id="NP_464970.1" /db_xref="GeneID:986176" /translation="MGLTATEALMKMKEKGYKHTDKREFLINLLARKNKYLTAKDVLE NMKDDFPGISFDTIYRNLSLFVELGIFEETDLSGERNFRLACTHEHHHHHFICMKCGK TKEIMMCPMDFLTEALPGYQIDGHKFEVYGECPECLQAS" misc_feature complement(1478086..1478487) /gene="zurR" /locus_tag="lmo1445" /note="Fe2+ or Zn2+ uptake regulation protein Fur/Zur [Inorganic ion transport and metabolism]; Region: Fur; COG0735" /db_xref="CDD:440498" gene complement(1478477..1479355) /gene="zurM" /locus_tag="lmo1446" /db_xref="GeneID:986990" CDS complement(1478477..1479355) /gene="zurM" /locus_tag="lmo1446" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="metal (zinc) transport protein (ABC transporter, permease)" /protein_id="NP_464971.1" /db_xref="GeneID:986990" /translation="MIATLLQYDFIRNTFIVGLVIGVVAPLLGSFIVVRKLSLMADAL SHVTLGGIAVSLFLSKTYLPLAALNPLYLGFGFSVVGSLLMEKLRNVYKHFEELAIPI IMSAGMGFSVIFISLANGFNTDLFSYLFGSVSAVSRTDMITIVVTAIIVFIVILSLYK ELFLLSFDEEYAKVSGLKAKVFDVIFMVLVALVIASSMRIVGILLVSSLMTLPVAAAI RIAKGFKQTILLSILFGEIAVIGGLFTAYYLNLAPGGAIVIISVLLLIVTILYQKIRQ KILISKRGEENGTYSN" misc_feature complement(1478531..1479334) /gene="zurM" /locus_tag="lmo1446" /note="ABC-type Mn2+/Zn2+ transport system, permease component [Inorganic ion transport and metabolism]; Region: ZnuB; COG1108" /db_xref="CDD:440725" regulatory complement(1478505..1478510) /regulatory_class="ribosome_binding_site" /gene="zurM" /locus_tag="lmo1446" gene complement(1479330..1480103) /gene="zurA" /locus_tag="lmo1447" /db_xref="GeneID:986711" CDS complement(1479330..1480103) /gene="zurA" /locus_tag="lmo1447" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="metal (zinc) transport protein(ABC transporter, ATP-binding protein)" /protein_id="NP_464972.1" /db_xref="GeneID:986711" /translation="MKKIIEVNNVSYHYDKEHALENIHFQVAKGSFTGLIGPNGSGKS TMLKLILGVLKKQQGSISLFGEKQADFKDWVKIGFVSQKSNAFNSAFPATVKEVVASG LTKKKGLFKTLNNKDKEDIDYALKRVEMTDYLHRNIGELSGGQQQRVFIARALVSRPE LLILDEPTVGVDVENVKAFYELLAELNRTEEMTLLLVTHDLMAVNTYVNHVISINKRI IFDGSAHEYQHYLADRELEILAEQRRREDACLDCDASPV" misc_feature complement(1479423..1480103) /gene="zurA" /locus_tag="lmo1447" /note="ABC-type Mn2+/Zn2+ transport system, ATPase component [Inorganic ion transport and metabolism]; Region: ZnuC; COG1121" /db_xref="CDD:440738" regulatory complement(1479365..1479370) /regulatory_class="ribosome_binding_site" /gene="zurA" /locus_tag="lmo1447" regulatory complement(1480111..1480116) /regulatory_class="ribosome_binding_site" regulatory complement(1480211..1480236) /regulatory_class="terminator" gene complement(1480246..1481172) /locus_tag="lmo1448" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986727" CDS complement(1480246..1481172) /locus_tag="lmo1448" /EC_number="3.6.1.1" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the hydrolysis of pyrophosphate to phosphate" /codon_start=1 /transl_table=11 /product="manganese-dependent inorganic pyrophosphatase" /protein_id="NP_464973.1" /db_xref="GeneID:986727" /translation="MTKTLVFGHKNPDTDTICSAISYAELKKAQGADIEAVRLGELNS ETAFVLDYFQVTAPRLVQTVANEVSEVALVDHNERQQSVDDIDDVTVTAVVDHHRIAN FETSDPLYYRAEPVGCTTTILLKMFRENEVEVSKTVAGLMLSAIISDTLLFQSPTCTE EDKVAAQKLAQIADVDIQSYGMEMLKAGADVSKKTVAELLLDAKEFNMNDNKVEIAQI NVVDVNDVLSRRAEVEALMTQNIVDKGLDLYLFVITNILTNDSVGIAIGSKTAVVEEA YGVKFVENQAPLKGVVSRKKQVVPILTDTFAK" misc_feature complement(1480252..1481172) /locus_tag="lmo1448" /note="Inorganic pyrophosphatase/exopolyphosphatase [Energy production and conversion]; Region: PPX1; COG1227" /db_xref="CDD:440840" regulatory complement(1481181..1481186) /regulatory_class="ribosome_binding_site" gene complement(1481188..1482081) /locus_tag="lmo1449" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984467" CDS complement(1481188..1482081) /locus_tag="lmo1449" /EC_number="3.1.21.2" /experiment="EXISTENCE:[PMID:19448609]" /note="Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues" /codon_start=1 /transl_table=11 /product="endonuclease IV" /protein_id="NP_464974.1" /db_xref="GeneID:984467" /translation="MLRLGSHVSMSGKKMLLGASEEAASYGSNTFMIYTGAPQNTRRK PIEELNIEAGLEHMKAHDMADIVVHAPYIINIGNSVKPETFELGVNFLQSEIERTRAL GAKQIVLHPGAHVGEGADKGIKQIIQGLNEALIHDQDVQIALETMAGKGSECGRTFEE LAQIIDGVTHNELLSVTFDTCHTHDAGYDIVNDFDGVLNQFDKIVGIDRLKVLHINDS KNERGAHKDRHANIGFGHIGFDALHYIVHHPQLADVPKILETPYVGGDKASKKAPYKW EIAMLKNGEFDPDLLNKIQNS" misc_feature complement(1481218..1482081) /locus_tag="lmo1449" /note="endonuclease IV; Provisional; Region: PRK01060" /db_xref="CDD:179214" misc_feature complement(order(1481260..1481262,1481305..1481307, 1481866..1481868,1481980..1481982,1482061..1482063)) /locus_tag="lmo1449" /note="AP (apurinic/apyrimidinic) site pocket [active]" /db_xref="CDD:237986" misc_feature complement(order(1481848..1481850,1481857..1481859, 1481863..1481868,1481959..1481973)) /locus_tag="lmo1449" /note="DNA interaction; other site" /db_xref="CDD:237986" misc_feature complement(order(1481305..1481307,1481395..1481397, 1481401..1481403,1481440..1481442,1481536..1481538, 1481545..1481547,1481647..1481649,1481752..1481754, 1481875..1481877)) /locus_tag="lmo1449" /note="Metal-binding active site; metal-binding site" /db_xref="CDD:237986" regulatory complement(1482090..1482095) /regulatory_class="ribosome_binding_site" gene complement(1482096..1483403) /locus_tag="lmo1450" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987133" CDS complement(1482096..1483403) /locus_tag="lmo1450" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DEAD/DEAH box helicase" /protein_id="NP_464975.1" /db_xref="GeneID:987133" /translation="MTKKSRFDQFGFQPFIGLAIDKLGFYEPTEVQQKLIPGILKGES IIGQSQTGTGKTHTFILPIINNVNPEKDAVQAVITAPSRELATQIYNEIRKVTKYSEK EIAVQLVIGGTDKQRAIDKLKKQPQIIVGTPGRINDLIREQALFVHTAKTLVIDEADM TLDMGFLNDVDHIAGKMPANLQMLVFSATIPQKLKPFLSKYMENPRYEHIQPKVAASK TVEHRIMATRSRNKLDLLKNVLVGSQPYLAIVFTNTKTTADEVANGLIERGLKVAKIH GDVNPRERKRTMKQIENLDYQYVVATDLAARGIDIQGISHVVNYELPDDLDFYIHRTG RTGRAGHSGIALTLFEPADEDRLNQLEKMGIEFKHVDWKNKEFVTLEDRNRRAKREAK RETADPREIGMRKKAKQKGKPNYKKKINYKMNEIKRRERRKKR" misc_feature complement(1482150..1483388) /locus_tag="lmo1450" /note="Superfamily II DNA and RNA helicase [Replication, recombination and repair]; Region: SrmB; COG0513" /db_xref="CDD:440279" regulatory complement(1483415..1483420) /regulatory_class="ribosome_binding_site" regulatory 1483536..1483541 /regulatory_class="ribosome_binding_site" gene 1483549..1484544 /gene="ispH" /locus_tag="lmo1451" /gene_synonym="lytB" /db_xref="GeneID:987625" CDS 1483549..1484544 /gene="ispH" /locus_tag="lmo1451" /gene_synonym="lytB" /EC_number="1.17.1.2" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway" /codon_start=1 /transl_table=11 /product="4-hydroxy-3-methylbut-2-enyl diphosphate reductase" /protein_id="NP_464976.1" /db_xref="GeneID:987625" /translation="MEIIKISPRGYCYGVIDAMVIAKNASLDPNLPRPIHILGMIVHN KHVTDAFESIGIYTVDGANREEILDKITTGTVIFTAHGVSPSVKAKAVAKGLTTIDAT CPDVLHTYNLILEKQAAGYEIIYIGKKGHPEPEGAYGTAPDVVHLVETKADIDALSLL SDKIFVTNQTTMSKWDVADLMHYIKGKFPKAIQHQEICMATQVRQEAVALQAKDADLT IVVGDPRSNNTARLAQVSIEKAGTKAYRIADITELDIEWIKDAKKVAVTAGASTPTQL VREVLLFLEQFDAADKTTWKREHNQDFERILPKTKNKYMAEKRSQRLAHLKNGGS" misc_feature 1483549..1484430 /gene="ispH" /locus_tag="lmo1451" /gene_synonym="lytB" /note="4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed; Region: ispH; PRK01045" /db_xref="CDD:234893" misc_feature order(1483582..1483584,1483855..1483857,1484140..1484142) /gene="ispH" /locus_tag="lmo1451" /gene_synonym="lytB" /note="Fe-S cluster binding site [ion binding]; other site" /db_xref="CDD:260116" misc_feature order(1483591..1483593,1483672..1483677,1483786..1483791, 1483939..1483941,1483945..1483947,1484056..1484061, 1484221..1484232,1484359..1484361) /gene="ispH" /locus_tag="lmo1451" /gene_synonym="lytB" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:260116" misc_feature order(1483939..1483941,1483945..1483947,1484224..1484226, 1484230..1484232) /gene="ispH" /locus_tag="lmo1451" /gene_synonym="lytB" /note="catalytic site [active]" /db_xref="CDD:260116" regulatory 1484548..1484581 /regulatory_class="terminator" regulatory complement(1484548..1484581) /regulatory_class="terminator" gene complement(1484590..1485711) /locus_tag="lmo1452" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986883" CDS complement(1484590..1485711) /locus_tag="lmo1452" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464977.1" /db_xref="GeneID:986883" /translation="MKVANGYEYTAIMEKIAPKKLAMEGDPIGLQVGDLSRKVRKIMF TLDVLEEVVDEAIEKKVDLIIAHHPFLYRPTQHIDTTTKQGKMIKKLIKHDITVFAAH TNLDIAQGGVNNILADLLHLQNTTMIEETYSEPYCKIAVYVPENELESVRLALVNNGA GQIGTEYTECTFHTTGIGSFKPGANANPTIGEKDALTSVPEVKIEAIFPQYLTETITK AVKIAHPYEEPAIDVYTLEMQTYKEGLGRVGMLPKKLGMVSFIDKLKTAFAIDNVRFI GDLKTTVHKVAIIGGDGNKFIHQAKSTGADVFITGDVYYHTGHDLLAINLPTIDAGHN IEKVMKGYLKNKMEEQAKILDYEAEFIVSEVNTDPFQFC" misc_feature complement(1484608..1485681) /locus_tag="lmo1452" /note="PII-like insert in the uncharacterized protein YqfO, YbgI/NIF3 family [Function unknown]; Region: YqfO; COG3323" /db_xref="CDD:442552" gene complement(1485708..1486412) /locus_tag="lmo1453" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984399" CDS complement(1485708..1486412) /locus_tag="lmo1453" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464978.1" /db_xref="GeneID:984399" /translation="MNEEQLSKRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTAS FAIAGEVVDGPFQSAQKQVRSSGLTEHIDVRKGNGLAVIEKKDVIDTIVIAGMGGALI RTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQNNWLITSEAILREDNKIYEIMVLA PSKKPVAWTKQEIFFGPCLLKDQSAIFKSKWRHEANTWQNIIQTISNNQPVSPENQAK IRELEHKIALVEDVLK" misc_feature complement(1485711..1486400) /locus_tag="lmo1453" /note="tRNA A22 N1-methylase [Translation, ribosomal structure and biogenesis]; Region: TrmK; COG2384" /db_xref="CDD:441950" regulatory complement(1485719..1485724) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1453" regulatory complement(1486420..1486425) /regulatory_class="ribosome_binding_site" regulatory complement(1486443..1486469) /regulatory_class="terminator" gene complement(1486480..1487604) /gene="rpoD" /locus_tag="lmo1454" /db_xref="GeneID:984456" CDS complement(1486480..1487604) /gene="rpoD" /locus_tag="lmo1454" /experiment="EXISTENCE:[PMID:19448609]" /note="sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor RpoD" /protein_id="NP_464979.1" /db_xref="GeneID:984456" /translation="MSDKTKNTKPVAELSVEQVKEALIEEGKKKGILTYAKIAARLAP FTLDSDQMDEYLEHVGEAGIEVSDDADDEDPDETELVKEETESFDLTDMSVPPGVKIN DPVRMYLKEIGRVDLLTADEEIALAKRIEAGDIEAKGRLAEANLRLVVSIAKRYVGRG MLFLDLIQEGNMGLMKAVEKFDFNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHM VETINKLIRVQRSLLQDLGRDPSPEEIGEEMDLPTEKVREILKIAQEPVSLETPIGEE DDSHLGDFIEDQDATSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRT LEEVGRVFGVTRERIRQIEAKALRKLRHPSRSKQLKDFLE" misc_feature complement(1486483..1487589) /gene="rpoD" /locus_tag="lmo1454" /note="RNA polymerase sigma factor RpoD; Validated; Region: PRK09210" /db_xref="CDD:236413" regulatory complement(1487618..1487623) /regulatory_class="ribosome_binding_site" gene complement(1487699..1489579) /gene="dnaG" /locus_tag="lmo1455" /db_xref="GeneID:986564" CDS complement(1487699..1489579) /gene="dnaG" /locus_tag="lmo1455" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA primase" /protein_id="NP_464980.1" /db_xref="GeneID:986564" /translation="MARIPEEVIDQVRNQADIVDIIGNYVQLKKQGRNYSGLCPFHGE KTPSFSVSPEKQIFHCFGCGKGGNVFSFLMEHDGLTFVESVKKVADMSHLDVAIELPE ERDTSNLPKETSETAKMVEMHQLTAKLYHYILMETEEGTAALTYLKERGMSEQMMTTF QIGFAPNHHATITSFLEKRGMDLQLAGAAGLLSERDDGQMVDRFRNRIMFPITNDRGQ IIAFSGRLFDRDDGPKYLNSPETPVFNKRRILFHFSEARQAIRKQEEITLMEGFMDVI SAEEAGVQNAVASMGTSLTEEHADLIKRLTNRAIICYDGDRAGIEAAYKAGTLLVERN RLDVFVLQLPAGKDPDDFIRASGPEKFKEVYKQQRMTWTAFKIHYLRKERNLQNETEQ IGYIDDCLREIAKLDQAVERELYLKQLADEFELTIETLKQQLQQSLKNSQKSRQMASY NEPPIDDSFMGMMPQEGAEMLFSFEQPAQKLSAHTISEQQLMKAMMESRDNFLLIKQL LGDTTFYHDNYEALYTYLIGYFAEGNDADPTKFMDSVPDAAMKGLISSLEMVISPDEQ GKPQFEDYIRSLKRYKLEQKKKELEQELATYNRENDNENEIRVMLEIVQLNRQLNSGQ LD" misc_feature complement(1488224..1489573) /gene="dnaG" /locus_tag="lmo1455" /note="DNA primase (bacterial type) [Replication, recombination and repair]; Region: DnaG; COG0358" /db_xref="CDD:440127" regulatory complement(1489591..1489596) /regulatory_class="ribosome_binding_site" gene complement(1489599..1490039) /locus_tag="lmo1456" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986822" CDS complement(1489599..1490039) /locus_tag="lmo1456" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464981.1" /db_xref="GeneID:986822" /translation="MPQILVDADACPVKAEIKQVAKEFQLEVTFVASFNHYSVNTNGE NWIFVDTGKESADMRMMNLAKKGDIIVTQDIGLASILLAKGTFVFSNRGELYREEEMS LMLDIRYRHAKERQQGKYSKGPKAMSDQDRSLFKDRLTTFLQNK" misc_feature complement(1489608..1490036) /locus_tag="lmo1456" /note="Uncharacterized conserved protein YaiI, UPF0178 family [Function unknown]; Region: YaiI; COG1671" /db_xref="CDD:441277" regulatory complement(1490049..1490054) /regulatory_class="ribosome_binding_site" gene complement(1490229..1491053) /locus_tag="lmo1457" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987875" CDS complement(1490229..1491053) /locus_tag="lmo1457" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464982.1" /db_xref="GeneID:987875" /translation="MTQPAVYVVSDSTGETAELVTRAALSQFGQTPKFIHRFHHVDSS HMIEEIVDLVAVNNGIIVHTIVLESVREELNKTAQAFGVPIIDLFGPLLNQLEETYKI KPLSEPGRVRSMDEAYFNKVAAIEFAVENDDGRNPRGILQADYVLIGISRTSKTPLSQ YLALKGLKIVNIPIVPEAQIPDELFEIDPKKIIGLKISKQKLTKIRQERLISIGLPGA GTYASNQRIDEELAIFNKLASKLNCFVLDVTNKAIEETANEILIHIGEIVDENLEL" misc_feature complement(1490271..1491038) /locus_tag="lmo1457" /note="Kinase/pyrophosphorylase; Region: Kinase-PPPase; pfam03618" /db_xref="CDD:460990" regulatory complement(1491062..1491067) /regulatory_class="ribosome_binding_site" gene complement(1491087..1493153) /gene="glyS" /locus_tag="lmo1458" /db_xref="GeneID:987668" CDS complement(1491087..1493153) /gene="glyS" /locus_tag="lmo1458" /experiment="EXISTENCE:[PMID:19448609]" /note="glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA" /codon_start=1 /transl_table=11 /product="glycyl-tRNA synthetase subunit beta" /protein_id="NP_464983.1" /db_xref="GeneID:987668" /translation="MSKDFLLEIGLEEMPAQYVTSSVLQLEKRVTDWLTENKIEFGEI KTYSTPRRLTVLVEGMAEEQANRVEEAKGPAKKIALDEEGNWSKAALGFAKSQKVDPA DLTFRDIKGVEYIYIKKEVIGEKTSTLLPSLEKVVTSMTFPVSMHWGSNDLRYIRPIK WLIAMFDEEIIPFEITGVTTSNTSRGHRFLGKSATIKQPSDYPNALLEQFVVVNAEER KQAIVEQLRELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITT MKEHQRYFPVFSQAGELLPHFVTVRNGNHENLDTVARGNEKVLRARLSDADFFYQEDL KMTIDEAVAKLQNIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQDIIRLTNIY KFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGELPQTDLGSL IAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWNIPMLEVISRIVD MERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQLIDR AQILNEHAEAEWFRPTIEALSRVVKIAKKYEDGVEVDPALFENEYEQALFDKLEKLKF DYAGLTIIERLKAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLFELASFIKEFAQM DEINVK" misc_feature complement(1491114..1493153) /gene="glyS" /locus_tag="lmo1458" /note="Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]; Region: GlyS; COG0751" /db_xref="CDD:440514" gene complement(1493146..1494036) /gene="glyQ" /locus_tag="lmo1459" /db_xref="GeneID:986742" CDS complement(1493146..1494036) /gene="glyQ" /locus_tag="lmo1459" /EC_number="6.1.1.14" /experiment="EXISTENCE:[PMID:19448609]" /note="glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA" /codon_start=1 /transl_table=11 /product="glycyl-tRNA synthetase subunit alpha" /protein_id="NP_464984.1" /db_xref="GeneID:986742" /translation="MNLQTMIRTLQDYWSEQGCIMLQSYDVEKGAGTMSPYTFLKAIG PEPWKAGYVEPSRRPADGRYGENPNRLFQHHQFQVVMKPSPDNIQELYLGSLEKLGIN PLEHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQVGGLECFPVTSEITYG VERLASYIQDKENVFDLEWTEGISYRDIFFQAEFENSTYAFETSNTDMLLTLFDTYER EATRQMQDGLVFPAYDYVLKCSHTFNLLDARGVVSVTERAQYIGRIRNLARRIAKTFY ESREKLGFPLLKEEGGKRHE" misc_feature complement(1493188..1494036) /gene="glyQ" /locus_tag="lmo1459" /note="Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]; Region: GlyQ; COG0752" /db_xref="CDD:440515" regulatory complement(1493162..1493167) /regulatory_class="ribosome_binding_site" /gene="glyQ" /locus_tag="lmo1459" regulatory complement(1494045..1494050) /regulatory_class="ribosome_binding_site" gene 1494104..1494276 /locus_tag="lmos52" /db_xref="GeneID:18245196" misc_RNA 1494104..1494276 /locus_tag="lmos52" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245196" gene complement(1494317..1495084) /gene="recO" /locus_tag="lmo1460" /db_xref="GeneID:987669" CDS complement(1494317..1495084) /gene="recO" /locus_tag="lmo1460" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA" /codon_start=1 /transl_table=11 /product="DNA repair protein RecO" /protein_id="NP_464985.1" /db_xref="GeneID:987669" /translation="MEKCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSR LAAVTQLFTNGYFTFFGGNGLGTLQQGEVIETFSSIQQDIFMTAYATYVCELLDKATE ERQPNPYLYELTFQILRDIDEGYDPQILTQIYEMKMLPVLGLYPTMDKCAICGETTGH FDFSTSSNGIICHRCFEKDRYRMHLPENVVKLLRLFFIFQLDRLGNIDVKQETKDWLQ KAIDTYYDEYSGLYLKSRKFIREMDKWENMLKKDSDD" misc_feature complement(1494359..1495084) /gene="recO" /locus_tag="lmo1460" /note="Recombinational DNA repair protein RecO (RecF pathway) [Replication, recombination and repair]; Region: RecO; COG1381" /db_xref="CDD:440991" regulatory complement(1495094..1495099) /regulatory_class="ribosome_binding_site" regulatory 1495205..1495210 /regulatory_class="ribosome_binding_site" gene 1495221..1495850 /locus_tag="lmo1461" /db_xref="GeneID:987662" CDS 1495221..1495850 /locus_tag="lmo1461" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1461" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464986.1" /db_xref="GeneID:987662" /translation="MGMLLILLVSLFILTFIGVVVGIILLIVRKEKWAGIIVAGLSVG IGFLVLVAGLNITTIKLFEGFNNPLSIHNYNSSNDPFTNDYSEDYDDDYYDDYIDVSY GESVEIENDSTVTIYKPELFQIKESYDIYKVKVKYANTSSDPISFYSEDIALYDNADD DYGQQITEEGFAGEIQPGETKELTLYYEVYNLGPYDVEYDNYNWTTSKE" misc_feature 1495266..>1495388 /locus_tag="lmo1461" /note="PTS system sugar-specific permease component; Region: EIIC-GAT; cl46494" /db_xref="CDD:480834" misc_feature 1495527..1495793 /locus_tag="lmo1461" /note="Domain of unknown function (DUF4352); Region: DUF4352; cl13117" /db_xref="CDD:448816" regulatory 1495859..1495894 /regulatory_class="terminator" regulatory complement(1495859..1495894) /regulatory_class="terminator" gene complement(1495899..1496804) /gene="era" /locus_tag="lmo1462" /gene_synonym="bex; rbaA; sdgE; yqfH" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987664" CDS complement(1495899..1496804) /gene="era" /locus_tag="lmo1462" /gene_synonym="bex; rbaA; sdgE; yqfH" /experiment="EXISTENCE:[PMID:19448609]" /note="Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome" /codon_start=1 /transl_table=11 /product="GTP-binding protein Era" /protein_id="NP_464987.1" /db_xref="GeneID:987664" /translation="MSEPFKSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRN KVQGVYTTDESQIIFIDTPGIHKPKHKLGDFMVKIALNTFQEVDLIYFVIDASTGFGR GDEFIIEKLKNVQTPVFLLINKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQGNNV PNLLEQTNANLEIGPMYYPKDQITDHPERFIISELIREQVLQLTREEVPHSVAVVIEG IEKNPKTEKLTINATIIVERSTQKGIIIGKQGQMLKQIGMRARKEIERLLGSKVFLEI WVKVQKNWRDKEHYLQDYGFDREEY" misc_feature complement(1495917..1496792) /gene="era" /locus_tag="lmo1462" /gene_synonym="bex; rbaA; sdgE; yqfH" /note="GTPase Era, involved in 16S rRNA processing [Translation, ribosomal structure and biogenesis]; Region: Era; COG1159" /db_xref="CDD:440773" gene complement(1496801..1497196) /locus_tag="lmo1463" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987666" CDS complement(1496801..1497196) /locus_tag="lmo1463" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cytidine deaminase" /protein_id="NP_464988.1" /db_xref="GeneID:987666" /translation="MKENNFISLAKQAREFAYVPYSKFPVGAALVTKDDEVVLGCNIE NASFGLTNCAERTAIFKAVSEGKRDFKQLVVVADTDGPVSPCGACRQVISEFCAPDMP VILTNLTGKTATVTVKELLPGAFTSEDML" misc_feature complement(1496807..1497196) /locus_tag="lmo1463" /note="Cytidine deaminase [Nucleotide transport and metabolism]; Region: Cdd; COG0295" /db_xref="CDD:440064" regulatory complement(1496812..1496817) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1463" regulatory complement(1497206..1497213) /regulatory_class="ribosome_binding_site" gene complement(1497221..1497616) /locus_tag="lmo1464" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987671" CDS complement(1497221..1497616) /locus_tag="lmo1464" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="diacylglycerol kinase" /protein_id="NP_464989.1" /db_xref="GeneID:987671" /translation="MLMDLKDRKYKRSKNYAESFHHAFTGLKTAFLEERNMRFHTFAA LAVIICGFFFHVTKSEWILLILSIFGVLTLEMVNTAIERAVDVATEQYIDEAKKAKDV AAGAVLLAAIVASFIGLIIFIPYFCQMFL" misc_feature complement(1497251..1497565) /locus_tag="lmo1464" /note="Integral membrane undecaprenol kinase and similar enzymes; Region: UDPK_IM_like; cd14265" /db_xref="CDD:260134" misc_feature complement(order(1497254..1497259,1497266..1497268, 1497278..1497280,1497287..1497292,1497299..1497304, 1497311..1497313,1497320..1497322,1497329..1497334, 1497353..1497358,1497362..1497370,1497374..1497382, 1497386..1497391,1497395..1497400,1497410..1497412, 1497419..1497421,1497428..1497433,1497437..1497445, 1497527..1497532,1497536..1497556)) /locus_tag="lmo1464" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:260134" misc_feature complement(order(1497314..1497319,1497359..1497361, 1497371..1497373,1497392..1497394,1497515..1497517, 1497542..1497544)) /locus_tag="lmo1464" /note="putative active site [active]" /db_xref="CDD:260134" misc_feature complement(order(1497371..1497373,1497515..1497517)) /locus_tag="lmo1464" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:260134" gene complement(1497594..1498079) /locus_tag="lmo1465" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987827" CDS complement(1497594..1498079) /locus_tag="lmo1465" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="metalloprotease" /protein_id="NP_464990.1" /db_xref="GeneID:987827" /translation="MTVLEIDLLDETKNLLDEDKQLVENILQFAAEYLKIEQGTELSL TFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIIS TEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGLE R" misc_feature complement(1497609..1498022) /locus_tag="lmo1465" /note="Endoribonuclease YbeY; Region: YbeY; pfam02130" /db_xref="CDD:460455" regulatory complement(1497622..1497629) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1465" regulatory complement(1498087..1498092) /regulatory_class="ribosome_binding_site" gene complement(1498096..1500252) /locus_tag="lmo1466" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987828" CDS complement(1498096..1500252) /locus_tag="lmo1466" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464991.1" /db_xref="GeneID:987828" /translation="MKLAKKWRDWYIESGKKYLFPLLLVCFAVIAYFLVCQMTKPESY NVKLFQVAEKTIRSPQTVEDTEKTKEERTKASDAVEDVYVYNRETGQNRVALIQSLFA YVNEVNAEAQEKDTKNKEKAKKENKPAPAPTSTEDKLKNLKDKLSSNVSEKITSNISD EVFTTLIEAKSKDFNVMEDVVTTEVEKSMENKIRDENLNSVKIRARDDIELSAIPAYY KNVSKALVSYAIVPNEVYDEEQTDARRKEAAQSVVPVKILQGQVIVQEGQIVDRETYR QLKMLHLLDQKMPVKQYAGFAIFIIALAAILFLYTKKQTQPKAKKMQTMLIFSSVYLV SLFMLFIILFLETQNIANIAFLFPAAFAPMILKILLNEKYAFLSVIFIAVTSLLTFQN DATSGITIFILLSGATSVVMLRDYSRRSAIMLSGFMVGLINMIYVLLLLLINNSTLLQ VSTLMALGYAFLGGFGAFILGVGVIPLFETIFGLLTTSRLVELANPNHPLLKKILMKA PGTYHHSMMVANLAEACADKIGANSLLVRVGCFYHDIGKTLRPPYFVENQLQGINPHD RLTPEQSRDIILSHTKDGAEILKENHMPQPIIDIALQHHGTTLLKYFYFKAKETNPDV KEADYRYSGPKPQTKEIAIINISDSVEAAVRSSTEPTMAKITEIIDGIIKDRFLDGQF TECDITIQEIKIIRDTLIATLNGIYHQRIQYPDDKD" misc_feature complement(1498102..1500252) /locus_tag="lmo1466" /note="Cyclic di-AMP-specific phosphodiesterase PgpH, HD superfamily [Signal transduction mechanisms]; Region: PgpH; COG1480" /db_xref="CDD:441089" regulatory complement(1500260..1500265) /regulatory_class="ribosome_binding_site" gene complement(1500268..1501227) /locus_tag="lmo1467" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986679" CDS complement(1500268..1501227) /locus_tag="lmo1467" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphate starvation-induced protein PhoH" /protein_id="NP_464992.1" /db_xref="GeneID:986679" /translation="MLNEFNEVVELSDDTNIQDLFGNNNKNIELLEELLQVKIITRGE SLSITGEEEPVQHTTAVLNELILTVKRGIHIDGRDIAQAVKMQRNGTLIYFHTLFEEE ITKNAKGTPIRPKTFGQRTYIQMIKKHDIVFGVGPAGTGKTYLAVVMAVDAWKKGNVS KIILTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYDIFGTEHTTRLMDRGVIEIA PLAYMRGRTLDHAFVILDEAQNTTIAQMKMFLTRLGYDSKMIVNGDMTQIDLPKGATS GLVNAEQVLKDVKDIGFVYFEHHDVVRHPLVAEIIKAYEGKQN" misc_feature complement(1500283..1501206) /locus_tag="lmo1467" /note="Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]; Region: PhoH; COG1702" /db_xref="CDD:441308" regulatory complement(1501235..1501240) /regulatory_class="ribosome_binding_site" regulatory complement(1501348..1501381) /regulatory_class="terminator" gene complement(1501415..1501861) /locus_tag="lmo1468" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987837" CDS complement(1501415..1501861) /locus_tag="lmo1468" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_464993.1" /db_xref="GeneID:987837" /translation="MTLLDKLNEDMKQAMRDKEKEKLSVIRMLKAALQNEAIHQGVKD LTPDDEVTVISRELKQRRDSLAEFDKAGRSDLSDKVRSEIVIVEDYAPKQLTPEELEN IVKATIEEVGASSKADFGKVMSAIMPKVKGKADGGAVNQFVKKYLS" misc_feature complement(1501418..1501861) /locus_tag="lmo1468" /note="Uncharacterized conserved protein YqeY, may have tRNA amino acid amidase activity [General function prediction only]; Region: YqeY; COG1610" /db_xref="CDD:441218" regulatory complement(1501870..1501875) /regulatory_class="ribosome_binding_site" gene complement(1501881..1502054) /gene="rpsU" /locus_tag="lmo1469" /db_xref="GeneID:987865" CDS complement(1501881..1502054) /gene="rpsU" /locus_tag="lmo1469" /experiment="EXISTENCE:[PMID:19448609]" /note="a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S21" /protein_id="NP_464994.1" /db_xref="GeneID:987865" /translation="MSKTVVRKNESLEDALRRFKRTVSKSGTLQESRKREFYEKPSVK RKKKSEAARKRKF" misc_feature complement(1501890..1502054) /gene="rpsU" /locus_tag="lmo1469" /note="Ribosomal protein S21 [Translation, ribosomal structure and biogenesis]; Region: RpsU; COG0828" /db_xref="CDD:440590" regulatory complement(1502064..1502069) /regulatory_class="ribosome_binding_site" gene complement(1502252..1503019) /locus_tag="lmo1470" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986707" CDS complement(1502252..1503019) /locus_tag="lmo1470" /experiment="EXISTENCE:[PMID:19448609]" /note="in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase" /codon_start=1 /transl_table=11 /product="16S ribosomal RNA methyltransferase RsmE" /protein_id="NP_464995.1" /db_xref="GeneID:986707" /translation="MQRYFVTSELENDNDTLAITGENFHHIARVMRMKESDQVFIVFP SKKTCIAAITAINEEEVLLNLVKWLEEDTELPIEITIASGLPKGDKLELIIQKSTELG AHKFISYKAERSVVKWDDKKVIKKIERLQKIAQEAAEQSHRTIIPEVHYAASFKELMF GHVHYDFVIAAYEESAREGEDSALASLFQTMKPGQSVLCIFGPEGGISEKELLLLEEA NAKLAGLGPRILRTETAPLYVLSAASFYFDLYKNKNR" misc_feature complement(1502279..1503019) /locus_tag="lmo1470" /note="16S rRNA U1498 N3-methylase RsmE [Translation, ribosomal structure and biogenesis]; Region: RsmE; COG1385" /db_xref="CDD:440995" gene complement(1503020..1503964) /gene="prmA" /locus_tag="lmo1471" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985409" CDS complement(1503020..1503964) /gene="prmA" /locus_tag="lmo1471" /experiment="EXISTENCE:[PMID:19448609]" /note="methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype" /codon_start=1 /transl_table=11 /product="ribosomal protein L11 methyltransferase" /protein_id="NP_464996.1" /db_xref="GeneID:985409" /translation="MEWSEVEVHTTNEAVEPVANVLTEFGAAGVSIEDVADFLRERED KFGEIYALRREDYPEDGVIIKAYFLKTTEFVEQIPEIEQTLKNLSTFDIPLGKFQFVV NDVDDEEWATAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPT TQLCIRALSNYLQPGDEVIDVGTGSGVLSIASAKLGAKSILATDLDEIATRAAEENIT LNKTEHIITVKQNNLLQDINKTNVDIVVANILAEVILLFPEDVYKALKPGGVFIASGI IEDKAKVVEEALKNAGLIIEKMEQQGDWVAIISKRGVE" misc_feature complement(1503032..1503958) /gene="prmA" /locus_tag="lmo1471" /note="Ribosomal protein L11 methyltransferase (PrmA); Region: PrmA; pfam06325" /db_xref="CDD:428888" misc_feature complement(order(1503221..1503223,1503272..1503277, 1503350..1503355,1503404..1503424)) /gene="prmA" /locus_tag="lmo1471" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" regulatory complement(1503030..1503035) /regulatory_class="ribosome_binding_site" /gene="prmA" /locus_tag="lmo1471" regulatory complement(1503973..1503978) /regulatory_class="ribosome_binding_site" gene complement(1504037..1505170) /gene="dnaJ" /locus_tag="lmo1472" /db_xref="GeneID:987063" CDS complement(1504037..1505170) /gene="dnaJ" /locus_tag="lmo1472" /experiment="EXISTENCE:[PMID:19448609]" /note="chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion" /codon_start=1 /transl_table=11 /product="molecular chaperone DnaJ" /protein_id="NP_464997.1" /db_xref="GeneID:987063" /translation="MAKRDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADE KFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGGAGGGFGGGGFSGFEDIFDTFF GGGGRQQDPNAPRQGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTCHGSGAKPGTT PEKCSHCGGKGSINVEQNTPFGRVVNKRTCQYCNGTGKEIKEKCPTCHGKGRVTKTKK IKVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVFVVIPDEFFEREADDIYVEVPI TFVQATLGDEIDVPTVHGKVRLKIPSGTQTGTTFRLRGKGVPHLRGNGTGDQHVIVKV IVPKKLDDKQKEILREFASTTGDKVDEQTSGFFDKMKRAFKGD" misc_feature complement(1504040..1505170) /gene="dnaJ" /locus_tag="lmo1472" /note="molecular chaperone DnaJ; Region: PRK14280" /db_xref="CDD:237656" regulatory complement(1505179..1505184) /regulatory_class="ribosome_binding_site" gene complement(1505312..1507153) /gene="dnaK" /locus_tag="lmo1473" /db_xref="GeneID:986290" CDS complement(1505312..1507153) /gene="dnaK" /locus_tag="lmo1473" /experiment="EXISTENCE:[PMID:19448609]" /note="heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria" /codon_start=1 /transl_table=11 /product="molecular chaperone DnaK" /protein_id="NP_464998.1" /db_xref="GeneID:986290" /translation="MSKIIGIDLGTTNSAVAVLEGGEAKIIPNPEGARTTPSVVGFKN GERQVGEVAKRAAITNPNTISSIKRHMGTNYKETIEGKDYSPQEISAIILQYLKSYAE DYLGETVDKAVITVPAYFNDAQRQATKDAGKIAGLEVERIINEPTAAALAYGMDKTET DQTILVFDLGGGTFDVSILELGDGVFEVHSTAGDNELGGDDFDKKIIDYLVAEFKKDN GIDLSQDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEVTLTRAKFD ELTHDLVERTIAPTRQALKDANLSASDIDQVILVGGSTRIPAVQETIKKELGKEPHKG VNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVMTTLIERNTTIPTSK SQTFSTAADNQPAVDIHVLQGERPMAKDNKTLGRFQLADIPPAPRGIPQIEVSFDIDK NGIVTVRAKDLGTGKEQNIVIKSSSGLTDEEIEKMVQDAEANAEEDKKNKENAELRNN ADQLVFTVDKTLKELEGKVEEEEVKKAEAARDELQEALKGEDFDAIKEKTESLNEIVQ NLSVKLYEQAAAEQQAAGGAEGQEAPQNDDVVDAEFEEVNDDDKENK" misc_feature complement(1505327..1507153) /gene="dnaK" /locus_tag="lmo1473" /note="molecular chaperone DnaK; Provisional; Region: dnaK; PRK00290" /db_xref="CDD:234715" regulatory complement(1507162..1507167) /regulatory_class="ribosome_binding_site" gene complement(1507187..1507762) /gene="grpE" /locus_tag="lmo1474" /db_xref="GeneID:986715" CDS complement(1507187..1507762) /gene="grpE" /locus_tag="lmo1474" /experiment="EXISTENCE:[PMID:19448609]" /note="with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor" /codon_start=1 /transl_table=11 /product="heat shock protein GrpE" /protein_id="NP_464999.1" /db_xref="GeneID:986715" /translation="MSEKKNKKERLADEIEQEELNILDEAEEAVEEEATADTLTEEQA KILELENKLDEVENRYLRMQADFENVKKRHIADRDASQKYRSQSLAQDLLPALDSFEK ALATTSDQEEVKQILKGMEMVYNQILIAFEKEGIEVIPAVGEQFDPNFHQAVMQDSDE NAGSNEITAELQKGYKLKDRVIRPSMVKVNQ" misc_feature complement(1507190..1507762) /gene="grpE" /locus_tag="lmo1474" /note="heat shock protein GrpE; Provisional; Region: PRK14140" /db_xref="CDD:237622" misc_feature complement(1507451..1507603) /gene="grpE" /locus_tag="lmo1474" /note="2-helical coiled coil [structural motif]; Region: 2-helical coiled coil" /db_xref="CDD:271355" misc_feature complement(order(1507361..1507366,1507382..1507384, 1507391..1507399,1507403..1507408,1507454..1507459, 1507463..1507477,1507481..1507489,1507496..1507501, 1507505..1507510,1507517..1507522,1507529..1507534, 1507541..1507543,1507547..1507555,1507562..1507567, 1507571..1507576,1507583..1507588,1507595..1507597)) /gene="grpE" /locus_tag="lmo1474" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:271355" misc_feature complement(order(1507196..1507198,1507205..1507207, 1507211..1507213,1507223..1507225,1507250..1507252, 1507298..1507312,1507316..1507321,1507325..1507327, 1507448..1507450,1507457..1507459,1507523..1507525, 1507547..1507549)) /gene="grpE" /locus_tag="lmo1474" /note="Hsp70 (ATPase domain) interactions [polypeptide binding]; other site" /db_xref="CDD:271355" misc_feature complement(1507361..1507408) /gene="grpE" /locus_tag="lmo1474" /note="2-helical coiled coil [structural motif]; Region: 2-helical coiled coil" /db_xref="CDD:271355" regulatory complement(1507771..1507776) /regulatory_class="ribosome_binding_site" gene complement(1507804..1508841) /gene="hrcA" /locus_tag="lmo1475" /db_xref="GeneID:986933" CDS complement(1507804..1508841) /gene="hrcA" /locus_tag="lmo1475" /experiment="EXISTENCE:[PMID:19448609]" /note="Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons" /codon_start=1 /transl_table=11 /product="heat-inducible transcription repressor" /protein_id="NP_465000.1" /db_xref="GeneID:986933" /translation="MLTERQLLIFRAIIDHFTWTIQPVGSKNLLKEKGLPYSSATIRN EMGVLEEYGFIEKTHSSSGRVPSEKGYRFYVDYLLQPKKLDKSDRQMIRSFFSENYYE MEGLIQNSALMLSDLTNYTSILLGPEATKNHLSGFRFVPINNFQAMLILITDQGHVDN HLVTIPEGTTLSDIERMVNILNERLVGLSLDDLKVQIPMEVKELLGKHVRNYESFMHV FSDSFAQASQQKVYFGGKTNILNQPEFHDINKVREMLHLMEEEQDVYELFRDIPDGLQ VKIGRENNNSLMEDCSIITATYNIAGERVGGIVLLGPTRMEYSRMMGLVDVMSRDLTD VLTKLYRDNQN" misc_feature complement(1507828..1508838) /gene="hrcA" /locus_tag="lmo1475" /note="Transcriptional regulator of heat shock response [Transcription]; Region: HrcA; COG1420" /db_xref="CDD:441030" regulatory complement(1508850..1508855) /regulatory_class="ribosome_binding_site" gene complement(1508988..1510145) /gene="hemN" /locus_tag="lmo1476" /db_xref="GeneID:986959" CDS complement(1508988..1510145) /gene="hemN" /locus_tag="lmo1476" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III" /codon_start=1 /transl_table=11 /product="coproporphyrinogen III oxidase" /protein_id="NP_465001.1" /db_xref="GeneID:986959" /translation="MINTNLSSNESSAVYIHIPFCEHICYYCDFNKVFLEGQPVDEYV DLLIKEMELTVAKGPIAPVDTVFVGGGTPTTLNEAQIARLCTAIHNTLPLKKDIEFSF EANPGDLSLSKLQAMQDHGVNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIG FENVSIDLIFSLPGQTEADFQDTLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLF LPGQDAEANMYDLLLNEMEKHGRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAH GYVGNTRYSNFGPIKKYMEPLQENILPTFQQKELTLKEKMEEEMFLGLRKVDGVDKKH FKQKFGQDLDATFANAIQKTTAKGWLENNEENVALTRSGRFLGNNVFQEFL" misc_feature complement(1508991..1510133) /gene="hemN" /locus_tag="lmo1476" /note="Coproporphyrinogen-III oxidase HemN (oxygen-independent) or related Fe-S oxidoreductase [Coenzyme transport and metabolism]; Region: HemN; COG0635" /db_xref="CDD:440400" regulatory complement(1510154..1510159) /regulatory_class="ribosome_binding_site" gene complement(1510234..1511262) /locus_tag="lmo1477" /db_xref="GeneID:986668" CDS complement(1510234..1511262) /locus_tag="lmo1477" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_465002.1" /db_xref="GeneID:986668" /translation="MKNNVLVTGGTGFLGMHIIFQLLQQGYQVKTTVRSLKSKEKVIE ILQNNGITDFTHLSFVELDLSKDEGWKEAMLDCEYVLSVASPVFFGKFKNEEELISPA IEGITRILQAAKEAKVKRVVMTSNFGAIGFSNADKNSITTEAYWTDELAKGLSAYEKS KLIAEKEAWKFMENETELEFATINPVAIFGPSQSNHVSGSFDLLKNLLNGSMKRVINI PLNVVDARDVADLHIRAMITPEANGERFIASADGEISMADIAHLLQRERPELVDKMPK KTLPNAAIRAAALFSKHAKEGELMINMNRQISNSKARDVLGWKPISTKEEAVLAAVDS LAKYGLLD" misc_feature complement(1510312..1511250) /locus_tag="lmo1477" /note="aldehyde reductase, extended (e) SDRs; Region: AR_SDR_e; cd05227" /db_xref="CDD:187538" misc_feature complement(order(1510663..1510668,1510699..1510710, 1510780..1510782,1510792..1510794,1510885..1510893, 1511002..1511016,1511161..1511163,1511221..1511232, 1511236..1511238)) /locus_tag="lmo1477" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:187538" misc_feature complement(order(1510342..1510344,1510600..1510602, 1510618..1510620,1510654..1510656,1510702..1510710, 1510792..1510794,1510870..1510872,1510879..1510887, 1510996..1510998,1511002..1511004)) /locus_tag="lmo1477" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:187538" misc_feature complement(order(1510780..1510782,1510792..1510794, 1510885..1510887)) /locus_tag="lmo1477" /note="active site" /db_xref="CDD:187538" regulatory complement(1511271..1511276) /regulatory_class="ribosome_binding_site" regulatory 1511364..1511369 /regulatory_class="ribosome_binding_site" gene 1511375..1511812 /locus_tag="lmo1478" /db_xref="GeneID:986291" CDS 1511375..1511812 /locus_tag="lmo1478" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="NP_465003.1" /db_xref="GeneID:986291" /translation="MTYSIKEVSKIFNLSIYTLRYYDKQGLLPFVSKNQSGYREFTES DLNLIHTICCLKNTGMPLKQIRTYIDYCMEGPVSIEARKQLLLDHRAAVLKSLEDLTE NLKEVDVKIAKYSSPDAVEIITAERNYVSMEKKKHDLIYPYNI" misc_feature 1511381..1511716 /locus_tag="lmo1478" /note="Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB; Region: HTH_YyaN; cd01109" /db_xref="CDD:133384" misc_feature order(1511384..1511392,1511432..1511434,1511483..1511491) /locus_tag="lmo1478" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133384" misc_feature order(1511525..1511527,1511534..1511536,1511546..1511551, 1511576..1511578,1511630..1511632,1511642..1511644, 1511660..1511662,1511672..1511674,1511681..1511686) /locus_tag="lmo1478" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:133384" regulatory 1511817..1511850 /regulatory_class="terminator" regulatory complement(1511817..1511850) /regulatory_class="terminator" gene complement(1511858..1513684) /gene="lepA" /locus_tag="lmo1479" /db_xref="GeneID:986365" CDS complement(1511858..1513684) /gene="lepA" /locus_tag="lmo1479" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GTP-binding protein LepA" /protein_id="NP_465004.1" /db_xref="GeneID:986365" /translation="MNKEEMNARQKKIRNFSIIAHIDHGKSTLADRILEQTGALTHRE MKNQLLDSMDLERERGITIKLNAVQLKYKAKDGETYIFHLIDTPGHVDFTYEVSRSLA ACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVREEIEDVI GLDASDAVLASAKSGIGIEDILEQIVEKVPEPSGDVNKPLKALIFDSVFDAYRGVIAN IRIMDGVVKAGDRIKMMSNGKEFEVTEVGVFSPKATPRDELLVGDVGYLTAAIKNVGD TRVGDTITLANNPAEEALDGYRKLNPMVYCGLYPIDSSKYNDLRDALEKLELNDSALQ FEAETSQALGFGFRCGFLGLLHMEIIQERIEREFNIDLITTAPSVIYHVNLTDGSNIV VDNPAEMPEPGVIESVEEPYVKATVMVPNDYVGAVMELAQNKRGNFITMEYLDDIRVS IVYEIPLSEIVYDFFDQLKSSTKGYASFDYELIGYKASKLVKMDILLNAEKVDALSFI VHRDFAYERGKIIVEKLKELIPRQQFEVPIQAAIATKIVSRSTIKALRKNVLAKCYGG DVSRKRKLLEKQKEGKKRMKQIGSVEVPQEAFMAILKMDESK" misc_feature complement(1511870..1513660) /gene="lepA" /locus_tag="lmo1479" /note="Translation elongation factor EF-4, membrane-bound GTPase [Translation, ribosomal structure and biogenesis]; Region: LepA; COG0481" /db_xref="CDD:440249" regulatory complement(1513692..1513697) /regulatory_class="ribosome_binding_site" regulatory 1513903..1513908 /regulatory_class="ribosome_binding_site" gene 1513917..1514171 /gene="rpsT" /locus_tag="lmo1480" /db_xref="GeneID:986932" CDS 1513917..1514171 /gene="rpsT" /locus_tag="lmo1480" /experiment="EXISTENCE:[PMID:19448609]" /note="binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S20" /protein_id="NP_465005.1" /db_xref="GeneID:986932" /translation="MPNIKSAIKRVKTAETRNSRNASQRSAMRTAIKKFDEAAANNAD NAKDLYVEASKKLDSAVSKGLIHKNNAARNKSRLAAKLAK" misc_feature 1513917..1514168 /gene="rpsT" /locus_tag="lmo1480" /note="Ribosomal protein S20 [Translation, ribosomal structure and biogenesis]; Region: RpsT; COG0268" /db_xref="CDD:440038" regulatory 1514191..1514209 /regulatory_class="terminator" gene complement(1514257..1515288) /gene="holA" /locus_tag="lmo1481" /db_xref="GeneID:986943" CDS complement(1514257..1515288) /gene="holA" /locus_tag="lmo1481" /experiment="EXISTENCE:[PMID:19448609]" /note="required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit delta" /protein_id="NP_465006.1" /db_xref="GeneID:986943" /translation="MLPEWKQIRSKKITPVYLIIGTEDYIINETKQLLIDNILEGEEV EFNYANLDLEEMPIEVVVQEAESMPFFGDKRLVMANNPLFLTTEKSKNKVEHDTAKLE AYLNEPVDYSVLCFVARVEKLDERKKLTKLLKKTATVIEAKRPNENELKKWIEAKLSE NNMQMSQEAITRLIELTSGQLTTAMNELQKLMLYCFDTKEITIQDVESLVVRSLEQNI FLLLDKMIAMDISGALRIYYDLLKQKEEPIKILALISSQFRLLNQLKLLEQQGYSQQQ AATKLKVHPFRVKLASKQAKNFTELQLNQALKRLAEIDLEMKTGFGDKEQKLEWFLFE LQDNRQKRV" misc_feature complement(1514317..1515258) /gene="holA" /locus_tag="lmo1481" /note="DNA polymerase III, delta subunit [Replication, recombination and repair]; Region: HolA; COG1466" /db_xref="CDD:441075" regulatory complement(1515297..1515302) /regulatory_class="ribosome_binding_site" gene complement(1515356..1517578) /gene="comEC" /locus_tag="lmo1482" /db_xref="GeneID:987002" CDS complement(1515356..1517578) /gene="comEC" /locus_tag="lmo1482" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein ComEC" /protein_id="NP_465007.1" /db_xref="GeneID:987002" /translation="MLVLAIICANFTSSIVPICICLLGLIAFIKKSKIILLFVLIYLL TYSFLFVVEKFNISSFTATEYSGNCQIIDNLKIDGDSFQAFVRCEKEKFQLSYKITTE EEQQKLKKLHYGQFISVYANVETPSIHRNQNQFNYQTYLKNQNVHYILRASNLAISEH FSPSFLMRLQNIRLKIITHLTEKISPTISPYCLALISGEKSGFSPEMYEVYQQMGVVH LLAISGLHVNLLIGAIYFLLLKFGVTRERAITFLLVFLPFYVILTGANPPVIRAATMT ALLLLSEKYTTKWSSFSAICLSFILFFLLQPYVMKEVGFQLSYTVSFGIILSSRQILA QQQNAFTKSLSISFISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTIIILPGCLTVF VLSFFSAEIFHFPEVVLTFFIQLVEKLTYIFAKIPHQTIVTGRPNILILMLIIITIII FFNQWQKKKFPFGILICFCFLCYFSSFNFSGKVSFIDVGQGDSILIQLPYNQGNYLID TGGQLPFEKEAWAKKRKPFTIGESTLTPVLKSKGINSLDKVIITHSDADHMEGLDDLQ KNITINELIYAKGAENKPIMKEALAAMPKVKQTIILAGAKWQIGENSFECLYPDKAGE GGNDDSIVLKAVLDDKVWLFTGDLEANGEMGISEQPIKADILKVGHHGSKTSSSKEFI QKVKPTFAVISCGLNNRFGHPHEETINTLETAGVTILRTDVQGEIIYTFGKGFEATLK " misc_feature complement(1517123..1517536) /gene="comEC" /locus_tag="lmo1482" /note="Domain of unknown function (DUF4131); Region: DUF4131; pfam13567" /db_xref="CDD:379269" misc_feature complement(1515404..1517311) /gene="comEC" /locus_tag="lmo1482" /note="mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain; Region: metallo-hydrolase-like_MBL-fold; cl23716" /db_xref="CDD:451500" misc_feature complement(1515371..1516135) /gene="comEC" /locus_tag="lmo1482" /note="DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily [Intracellular trafficking, secretion, and vesicular transport]; Region: ComEC; COG2333" /db_xref="CDD:441904" gene complement(1517613..1518173) /gene="comEB" /locus_tag="lmo1483" /db_xref="GeneID:986960" CDS complement(1517613..1518173) /gene="comEB" /locus_tag="lmo1483" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein ComEB" /protein_id="NP_465008.1" /db_xref="GeneID:986960" /translation="MQRIAWDQFFMAQSHLISSRSTCTRLMVGATIVRDKRIIAGGYN GSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTDKAELYVTHFPCLACT KSIIQAGIKKVYFAKDYKNHPYALELFNIAGVELQKVEFDESVLQVNNWNGEKMHTLV KEAAVEVNIDPEKAEQLYQSISEKLN" misc_feature complement(1517718..1518170) /gene="comEB" /locus_tag="lmo1483" /note="ComE operon protein 2; Region: ComEB; TIGR02571" /db_xref="CDD:131622" misc_feature complement(order(1517871..1517873,1517880..1517885, 1517958..1517960,1517964..1517966,1518039..1518041)) /gene="comEB" /locus_tag="lmo1483" /note="catalytic motif [active]" /db_xref="CDD:238613" misc_feature complement(order(1517871..1517873,1517880..1517882, 1517958..1517960,1517964..1517966)) /gene="comEB" /locus_tag="lmo1483" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:238613" regulatory complement(1518182..1518187) /regulatory_class="ribosome_binding_site" gene complement(1518245..1518847) /gene="comEA" /locus_tag="lmo1484" /db_xref="GeneID:986981" CDS complement(1518245..1518847) /gene="comEA" /locus_tag="lmo1484" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein ComEA" /protein_id="NP_465009.1" /db_xref="GeneID:986981" /translation="MVELVKKYKNYILIGIAILCAGLVYIWIPDGKTDTVTANPTATK EEKPGKEEVKLPNYVYIDIKGAIRTPGVYKLPVNARVQDVVKTAGGLTDEADSGKLNL AEKLKDEMSIYVYKKGEEGPTLQGASAEETTSNLEKTNINSANKADLQQVPGIGESKA TAIIEYREKEGLFQTIEDLKNVSGIGEKTVEKLKEYLDVN" misc_feature complement(<1518560..>1518682) /gene="comEA" /locus_tag="lmo1484" /note="Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold [Cell wall/membrane/envelope biogenesis]; Region: Wza; COG1596" /db_xref="CDD:441204" misc_feature complement(1518251..1518610) /gene="comEA" /locus_tag="lmo1484" /note="comEA protein; Region: comE; TIGR01259" /db_xref="CDD:213597" regulatory complement(1518857..1518862) /regulatory_class="ribosome_binding_site" gene complement(1518950..1519681) /locus_tag="lmo1485" /db_xref="GeneID:987000" CDS complement(1518950..1519681) /locus_tag="lmo1485" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465010.1" /db_xref="GeneID:987000" /translation="MSYEYFPGFYDRLMDSELYDEWLEFSADFIGDAPKKVLDLACGT AEFALRLSFSGHQVTGVDLSKEMVAVAKEKVAAAEIDLPIIEQDMSKLALKQTFDVVT CFCDSLNYLETEQALEATIQAVSAHLEPNGLFLFDVHSVFKIEQGFKDYSYGDSDEEI STIWNSFPGEHPHSIEHELTFYILGEDDTYNRVDELHKERTYPIATYENLLKKFGFTK IDIYADFSHEKPNKTSERIFFAARK" misc_feature complement(1519262..1519675) /locus_tag="lmo1485" /note="Predicted methyltransferase, contains TPR repeat [General function prediction only]; Region: COG4976" /db_xref="CDD:444001" regulatory complement(1519689..1519694) /regulatory_class="ribosome_binding_site" regulatory complement(1519703..1519723) /regulatory_class="terminator" gene complement(1519736..1520092) /locus_tag="lmo1486" /db_xref="GeneID:986988" CDS complement(1519736..1520092) /locus_tag="lmo1486" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1486" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465011.1" /db_xref="GeneID:986988" /translation="MNSYDTLMLTAKAADDKRAEDILALDMKGLSSFADYFVICHGNS DKQVQAIAREIKEKALENQVDVKRLEGFDAAQWILIDLGDVIIHVFHKEERSYYNLEK LWGDAPLVDVSAAFIS" misc_feature complement(1519760..1520092) /locus_tag="lmo1486" /note="Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits [Translation, ribosomal structure and biogenesis]; Region: RsfS; COG0799" /db_xref="CDD:440562" gene complement(1520097..1520672) /locus_tag="lmo1487" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986903" CDS complement(1520097..1520672) /locus_tag="lmo1487" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465012.1" /db_xref="GeneID:986903" /translation="MERNEVLKKVEAAMPNARFKHTLGVEKAAVELAEHYHMDVEKAR ITALLHDYAKYYDDDKARKIIEDEGYDPRLLSFHHSLWHAPVGAYLAEKEFGITDTEI LEAIRLHTTGSATMSDFDKLIYLADYTEQGRTFPGVYKARRLALKSLDEAMLFALSNT ITHLVKKQQLVFPDTLDAYNYFVNLNLEGDY" misc_feature complement(1520124..1520672) /locus_tag="lmo1487" /note="Diadenosine tetraphosphatase YqeK or a related HD superfamily phosphohydrolase [Signal transduction mechanisms, General function prediction only]; Region: YqeK; COG1713" /db_xref="CDD:441319" regulatory complement(1520104..1520109) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1487" gene complement(1520659..1521225) /gene="nadD" /locus_tag="lmo1488" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986963" CDS complement(1520659..1521225) /gene="nadD" /locus_tag="lmo1488" /experiment="EXISTENCE:[PMID:19448609]" /note="transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria" /codon_start=1 /transl_table=11 /product="nicotinic acid mononucleotide adenylyltransferase" /protein_id="NP_465013.1" /db_xref="GeneID:986963" /translation="MKHKVGILGGTFDPPHLAHLHMAEEAKKQLELEKILFLPNKIPP HKHISGMASINERVEMLQLMIEGIDSFEIDTRELMRTGKSYTYDTMRDMIIEQPDTDF YFIIGGDMVEYLPKWYHIDDLVKMVTFVGVNRPLYQPEVPYDVVKIDMPKTTISSTEI RNDIEHAEAFLPEKVWSYIKEHQLYGKK" misc_feature complement(1520665..1521225) /gene="nadD" /locus_tag="lmo1488" /note="nicotinate-nucleotide adenylyltransferase; Region: nadD; PRK00071" /db_xref="CDD:234611" misc_feature complement(order(1520761..1520763,1520824..1520829, 1520872..1520877,1520896..1520901,1520905..1520910, 1520914..1520916,1520968..1520976,1521097..1521099, 1521160..1521162,1521169..1521174,1521178..1521180, 1521190..1521204)) /gene="nadD" /locus_tag="lmo1488" /note="active site" /db_xref="CDD:185680" misc_feature complement(1521169..1521180) /gene="nadD" /locus_tag="lmo1488" /note="(T/H)XGH motif; other site" /db_xref="CDD:185680" regulatory complement(1520682..1520687) /regulatory_class="ribosome_binding_site" /gene="nadD" /locus_tag="lmo1488" regulatory complement(1521234..1521239) /regulatory_class="ribosome_binding_site" gene complement(1521243..1521533) /locus_tag="lmo1489" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986948" CDS complement(1521243..1521533) /locus_tag="lmo1489" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465014.1" /db_xref="GeneID:986948" /translation="MLTATQKRFLRKEAHNIQPIFQVGKGSVSPNLIIHVKEALEARE LIKISILQNCEEDKQTVAEKISARSGAEIVQVIGRTIILYKTSVNKQQIKLP" misc_feature complement(1521249..1521533) /locus_tag="lmo1489" /note="RNA-binding protein YhbY [Translation, ribosomal structure and biogenesis]; Region: YhbY; COG1534" /db_xref="CDD:441143" gene complement(1521533..1522354) /locus_tag="lmo1490" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986965" CDS complement(1521533..1522354) /locus_tag="lmo1490" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="shikimate 5-dehydrogenase" /protein_id="NP_465015.1" /db_xref="GeneID:986965" /translation="MEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDAFE TEIKKLMDSGVRGFNITTPFKERILPFLDELDNLAAASGAVNTVLKKEDKWYGFNTDG KGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTK DNNNHHAITLEEAEKQLADFTIIIQTTSIGLEASKNKSPISLANVKQGTICSDIIYNP AETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN" misc_feature complement(1521539..1522354) /locus_tag="lmo1490" /note="shikimate 5-dehydrogenase; Reviewed; Region: aroE; PRK00258" /db_xref="CDD:234703" regulatory complement(1521540..1521545) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1490" regulatory complement(1522363..1522368) /regulatory_class="ribosome_binding_site" gene complement(1522374..1523474) /locus_tag="lmo1491" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986978" CDS complement(1522374..1523474) /locus_tag="lmo1491" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GTP-binding protein" /protein_id="NP_465016.1" /db_xref="GeneID:986978" /translation="MTEEVRCIGCGAVIQTEDPDKIGYAPKSSLNNEQVICKRCFRLK HYNEIQDVALTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLV GNKEDVLPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIDELRNG QDVYVVGCTNVGKSTLINRIIKQASGENNVITTSQFPGTTLDKIEIPLADGNVLVDTP GIINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSLV VYVSNNLPIHRTKLEKAEALYEKQAGLVLQPPTEEDMKTLPKLVPYSFTVKEKADIVF SGLGWVTIPEGGAKVTAWVPEGVSATIRTSLV" misc_feature complement(1522377..1523456) /locus_tag="lmo1491" /note="ribosome biogenesis GTPase YqeH; Region: GTPase_YqeH; TIGR03597" /db_xref="CDD:213834" gene complement(1523471..1523992) /locus_tag="lmo1492" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986939" CDS complement(1523471..1523992) /locus_tag="lmo1492" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465017.1" /db_xref="GeneID:986939" /translation="MLKQFSPDKMLNTPFGITAAQLRKMGKTTILTDLDNTLLAWDQL DATDEVINWFTILKEEGIKVMIFSNNNEERVARVAKAIDVPYLARAKKPLGANFRWAL KEMDATPEETVMIGDQIMTDIFGGNRQKLTTIFVRPVKQTDGMATKLNRMMESVILKR LAKKNQIKWEESL" misc_feature complement(1523498..1523989) /locus_tag="lmo1492" /note="Predicted phosphohydrolase YqeG, HAD superfamily [General function prediction only]; Region: YqeG; COG2179" /db_xref="CDD:441782" regulatory complement(1523482..1523487) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1492" regulatory complement(1524002..1524007) /regulatory_class="ribosome_binding_site" regulatory 1524141..1524146 /regulatory_class="ribosome_binding_site" gene 1524154..1525962 /locus_tag="lmo1493" /db_xref="GeneID:986970" CDS 1524154..1525962 /locus_tag="lmo1493" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oligopeptidase" /protein_id="NP_465018.1" /db_xref="GeneID:986970" /translation="MSKDYSLTWDLENIYAGGSGSEELQQTLQEVKADLDSFVVNVSE WDVPENVEASAEFLLLVNQNADISKILLTAGSFLECLASADINDTRANELSALIYQYV ATLATAEDEWHDKFAQVSDRVWDELMEQNGLSQISFILSEARTNRRKKGSKEQEAAIN SLAVDGYRGWSDHYDTIVGKLRMHVTIDGEEKDVSAGQALNLLNHPDRAVRQAVFKEY TRVWQEESRLFSDTLNHLSGFRLATYDIRKWDNILDEPLAINRLDEQTLKSMWNVIQT NKPTFVRFLDRKAKLLGLEKLSFYDVESPLVFSSKPKKYTYQEGAEFIIEQFNKFSPK MANFAQSAFEKGWIEAEDRDNKRPGGFCTDFPVEKESRIFMTYDGAPGTVATLAHELG HAFHSHVIRDEPFENTDYAMNVAETASTFAEMIIADASVKDAKTKEEKITLLEDKIGR SIAFFMNIHARFIFECNFYEARKQGVVSVDRLNSLMEEAQREAYLDALDEYHPQFWAS KLHFYIADVPFYNFPYTFGYLFSLGIYHKAQAEGASYEDKYIALLQDTGSMTTEQLAE KHLGVDLRKADFWEEAVALAAKDVEDFLTLTEEYVK" misc_feature 1524175..1525941 /locus_tag="lmo1493" /note="oligoendopeptidase, pepF/M3 family; Region: M3_fam_3; TIGR02290" /db_xref="CDD:274069" regulatory 1525968..1525991 /regulatory_class="terminator" regulatory complement(1525968..1525991) /regulatory_class="terminator" gene complement(1525997..1526698) /locus_tag="lmo1494" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986944" CDS complement(1525997..1526698) /locus_tag="lmo1494" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase" /protein_id="NP_465019.1" /db_xref="GeneID:986944" /translation="MTIGIIGAMEEEVELLKNSMSSVEEIVIGGAKFYIGEIASKEVV LLESGIGKVNAALGTTLMADRFKPEVIINTGSAGGMAEGLAVGDVIISDRLAYGDVDV TEFGYTYGQVPRMPAFYQGDAVLLKKAETIYREYFATSENKAVYGLVVTNDSFIMRPD QHEIIRTFFPDVKAVEMEAAAIAQVAYQFDIPFLIIRAISDLANQEATISFDEFIHLA AKQSATCIIELLKTI" misc_feature complement(1526000..1526698) /locus_tag="lmo1494" /note="5'-methylthioadenosine/adenosylhomocysteine nucleosidase; Region: PRK05584" /db_xref="CDD:180148" misc_feature complement(order(1526051..1526053,1526090..1526092, 1526096..1526101,1526108..1526110,1526165..1526176, 1526234..1526239,1526465..1526473,1526546..1526551, 1526663..1526665,1526672..1526677)) /locus_tag="lmo1494" /note="active site" /db_xref="CDD:350159" misc_feature complement(order(1526129..1526140,1526144..1526149, 1526156..1526158,1526168..1526170,1526234..1526242, 1526402..1526404,1526408..1526410,1526504..1526512, 1526516..1526521,1526528..1526533,1526537..1526554, 1526558..1526560,1526606..1526608,1526669..1526671)) /locus_tag="lmo1494" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:350159" regulatory complement(1526706..1526711) /regulatory_class="ribosome_binding_site" gene complement(1526748..1527371) /locus_tag="lmo1495" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986966" CDS complement(1526748..1527371) /locus_tag="lmo1495" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465020.1" /db_xref="GeneID:986966" /translation="MADKRQSNNRRIKQNLVEGSRSQQNTKRKKTNLVLNVLIIVVSL LIIGSLYFVLFKTESDPAQQENKTASSTAKKEDAAKSSEKKKDSSDDKTTETTESDDP NVAKVITKDWKPIGTEQTGDHVNSYSSTSVDWQEKRKAFSVATDIPVSNTSLWFVEQG ADPATQAIGTLSTKENPDKAYRVYITWVDGEGWQPTKVEELKTNDKR" misc_feature complement(1526769..1527053) /locus_tag="lmo1495" /note="Domain of unknown function (DUF1510); Region: DUF1510; pfam07423" /db_xref="CDD:429456" regulatory complement(1527381..1527386) /regulatory_class="ribosome_binding_site" gene complement(1527422..1527904) /gene="greA" /locus_tag="lmo1496" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986962" CDS complement(1527422..1527904) /gene="greA" /locus_tag="lmo1496" /experiment="EXISTENCE:[PMID:19448609]" /note="necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus" /codon_start=1 /transl_table=11 /product="transcription elongation factor GreA" /protein_id="NP_465021.1" /db_xref="GeneID:986962" /translation="MATEKVFPMTLDGKAKLENELQELKTVKRKEVVERIKIARSFGD LSENSEYDSAKDEQAFVEGRITTIENMIRNAQIIDAAEAHNGLVTLGNTVTFIELPDG EEETYTIVGSAEADPFEGKISNDSPIAKGLLGHKEGEEVTIQTPAGDMSVKIEKITAS " misc_feature complement(1527434..1527895) /gene="greA" /locus_tag="lmo1496" /note="transcription elongation factor GreA; Reviewed; Region: greA; PRK00226" /db_xref="CDD:234693" regulatory complement(1527913..1527918) /regulatory_class="ribosome_binding_site" gene complement(1528098..1528727) /gene="udk" /locus_tag="lmo1497" /db_xref="GeneID:986986" CDS complement(1528098..1528727) /gene="udk" /locus_tag="lmo1497" /EC_number="2.7.1.48" /experiment="EXISTENCE:[PMID:19448609]" /note="functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor" /codon_start=1 /transl_table=11 /product="uridine kinase" /protein_id="NP_465022.1" /db_xref="GeneID:986986" /translation="MTKKPIVVGVTGGSGSGKTSVTKAICNHFSGHSILMIAQDVYYH DQANISFEDRLKVNYDHPLAFDTDLLISHIAALRRYESIEKPIYDYAKYTRKKEVEIQ EPREVIILEGILILEDKRLRDLMDIKVYVDTDDDIRFIRRLLRDMKERGRTMDSVIEQ YLSVVKPMHNEFIEPTKKFADIIIPEGGENHVAIDLMTTKIESILQKHV" misc_feature complement(1528104..1528676) /gene="udk" /locus_tag="lmo1497" /note="uridine/cytidine kinase; Provisional; Region: PRK05480" /db_xref="CDD:235492" misc_feature complement(order(1528161..1528163,1528305..1528307, 1528671..1528673)) /gene="udk" /locus_tag="lmo1497" /note="ATP-binding site [chemical binding]; other site" /db_xref="CDD:238981" misc_feature complement(order(1528302..1528304,1528542..1528544, 1528608..1528610)) /gene="udk" /locus_tag="lmo1497" /note="Sugar specificity [active]" /db_xref="CDD:238981" misc_feature complement(order(1528278..1528280,1528449..1528451, 1528458..1528460,1528464..1528466,1528551..1528553, 1528599..1528601)) /gene="udk" /locus_tag="lmo1497" /note="Pyrimidine base specificity [active]" /db_xref="CDD:238981" gene complement(1528724..1529377) /locus_tag="lmo1498" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986934" CDS complement(1528724..1529377) /locus_tag="lmo1498" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="O-methyltransferase" /protein_id="NP_465023.1" /db_xref="GeneID:986934" /translation="MNDIIHDYLLKNIPKSSPFFKELEAYAKENEVPIMEPDSLYCLL QILDIQKPKRILELGTAIGYSALKMADKLPDAEIITVERDEERYEQAIHNIQRYGASD RVKVLLTDAIEGAEEILAHGPFDAIFIDAAKAQYEKFFHIYTVSLAENGVIYSDNVLF KGLALDMTPEKQRKLRVARKMRHFNDFLVTHPDFETTTIPLGDGLSISKRKKTGGVS" misc_feature complement(1528742..1529251) /locus_tag="lmo1498" /note="tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; Region: TrmR; COG4122" /db_xref="CDD:443298" regulatory complement(1528734..1528739) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1498" regulatory complement(1529387..1529392) /regulatory_class="ribosome_binding_site" gene complement(1529454..1530524) /locus_tag="lmo1499" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987003" CDS complement(1529454..1530524) /locus_tag="lmo1499" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465024.1" /db_xref="GeneID:987003" /translation="MKNTKGKKITIIISIIILILVIATFSGYYYVKSQLEPKDEASKE KITVEIPAGSSISDISTILEDKKVINNASIFSFYVKYNNDTNLKAGNYELSPAMNTDQ IVKKMQEGKTVAPAKLVIPEGYTLDQIADRIVAYQPKLKKADVLKTMDDPEFVASMIK AYPETVTNDVLNKSIKHPLEGYLYPATYTFKGTDVSAEQIITEMVKATDVNIAKYRDE LTKQKMSVHKFLTMSSIIEKEATENVDRKMIASVFYNRLAKDMRLQTDPTVLYALGEH KSKTTYKDLEVDSPYNTYKNNGLPPGPISNSGDSSMEAALYPEKSDYLYFLANTKTGK VYFSKTLEEHNKLKEEHITKNN" misc_feature complement(1529457..1530446) /locus_tag="lmo1499" /note="Endolytic transglycosylase MltG, terminates peptidoglycan polymerization [Cell wall/membrane/envelope biogenesis]; Region: MltG; COG1559" /db_xref="CDD:441167" regulatory complement(1530531..1530536) /regulatory_class="ribosome_binding_site" regulatory 1530714..1530719 /regulatory_class="ribosome_binding_site" gene 1530727..1531353 /locus_tag="lmo1500" /db_xref="GeneID:986971" CDS 1530727..1531353 /locus_tag="lmo1500" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465025.1" /db_xref="GeneID:986971" /translation="MLHTLIQSLQDFTMWLVDSLGHWGIFLGMLIESVCIPLPSEVIM LFGGFMAEAGKLNFWLVVFAGISGNLVGSLIAYYIGKFGGRALVLKFGKYIFLNVKHL DKAELWFGRYGARAVFFGRVLPVIRTFISLPAGIAKMNVWKFIIYTILGCIPWNIFLT WLGYSLGSNWSVVEKYTRPISYLMLALVIAIVVYLAYKVWNKRARNAK" misc_feature 1530757..1531350 /locus_tag="lmo1500" /note="Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family [Cell wall/membrane/envelope biogenesis]; Region: DedA; COG0586" /db_xref="CDD:440351" regulatory 1531357..1531387 /regulatory_class="terminator" regulatory complement(1531357..1531387) /regulatory_class="terminator" gene complement(1531398..1531700) /locus_tag="lmo1501" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987755" CDS complement(1531398..1531700) /locus_tag="lmo1501" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465026.1" /db_xref="GeneID:987755" /translation="MAEEHNHNHEEENIIWITNEEGKEEAYEILFDFDSEDFDKSYVL YFPAGKGEDEEIEILASSYIQDEEGKQGQLKPVETDEEWDMIEEILATFLADEDEE" misc_feature complement(1531410..1531661) /locus_tag="lmo1501" /note="hypothetical protein; Provisional; Region: PRK13678" /db_xref="CDD:184235" regulatory complement(1531709..1531714) /regulatory_class="ribosome_binding_site" gene complement(1531716..1532132) /locus_tag="lmo1502" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986975" CDS complement(1531716..1532132) /locus_tag="lmo1502" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Holliday junction resolvase" /protein_id="NP_465027.1" /db_xref="GeneID:986975" /translation="MRIMGLDVGSKTVGVAISDPLGWTAQGVETIQIDENRKQFGYDR VKELVLEYEVEKVVVGLPKNMNNTIGPRAESSKIYAEVLEARIGLPVVLWDERLTTSA AERTLIEADVSRKKRKEVIDKLAAVMILQSYLDTTN" misc_feature complement(1531728..1532132) /locus_tag="lmo1502" /note="YqgF/RuvX protein, pre-16S rRNA maturation RNase/Holliday junction resolvase/anti-termination factor [Translation, ribosomal structure and biogenesis, Replication, recombination and repair, Transcription]; Region: YqgF; COG0816" /db_xref="CDD:440578" gene complement(1532129..1532401) /locus_tag="lmo1503" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987746" CDS complement(1532129..1532401) /locus_tag="lmo1503" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1503" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465028.1" /db_xref="GeneID:987746" /translation="MDSKDQTMFYNFGDDSIEEDVKKLMKQVYVALEEKGYNPVNQIV GYLLSGDPAYIPRHKDARSMIRRLERDEIIEELVKAYLKNNEIGEK" misc_feature complement(1532141..1532401) /locus_tag="lmo1503" /note="IreB family regulatory phosphoprotein; Region: IreB-like; PRK05473" /db_xref="CDD:180108" regulatory complement(1532137..1532144) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1503" regulatory complement(1532412..1532417) /regulatory_class="ribosome_binding_site" gene complement(1532493..1535132) /gene="alaS" /locus_tag="lmo1504" /db_xref="GeneID:987749" CDS complement(1532493..1535132) /gene="alaS" /locus_tag="lmo1504" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA" /codon_start=1 /transl_table=11 /product="alanyl-tRNA synthetase" /protein_id="NP_465029.1" /db_xref="GeneID:987749" /translation="MKQLSSAEVRQLFLDFFKEKGHTIEPSAPLVPNNDPTILWINSG VATMKKYFDGSVIPDNPRMANAQKSIRTNDIENVGKTARHHTFFEMLGNFSIGDYFKE GAIVFAWEFLTSPKWIGFDPDKLYVTVYPEDEEAKTLWREKIGLSDDHIVEIEDNFWD IGIGPSGPDSEIFYDRGPAFGDDASDPELYPGGENERYLEIWNLVFSQFNHNPDGTYT PLPKQNIDTGMGLERMVSIIQDAPTNFETDLFMPIIREVEQIAGVKYGHSQENDVAFK VIADHIRTVAFAIGDGALPSNEGRGYILRRLLRRAVRYAKVLTINEPFMYKLVPVVGK IMNSFYPEVENQTDFIQKVIRTEEERFHETLNEGLAILETILKTAKETNEQVIKGADI FKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQRARARAARADVKSMQVQGELL ANLTEKSAFVGYNSTEHVSEILYLIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVA DKGTIESETGLAYVEDVQKAPNKQNLHRISVKEGVLKTGDTVKLAVDKVKRRETIKNH TATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQITEEELTKMEEIVNEKIWE QINVVIEEMPIAEAKELGAMALFGEKYGDIVRVVQVGKYSIELCGGVHVRNTADIGLF KIVSETGIGAGTRRIEAVTGKEAYRFVTEQENTLKQAASLLKTTTKETPQKVELLQAD LREVKRENESLLSKLASAASADIFESPEEIGGVKVIAKQVNAKDMNQLRQFVDNWKDK KIGGILVLGAVQGDKVNLISAVSEEAIKAGYHAGKLLKEVATRCGGNGGGRPDMAQAG GKNPAELGTALDYVSTWVKEQQA" misc_feature complement(1532502..1535123) /gene="alaS" /locus_tag="lmo1504" /note="Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: AlaS; COG0013" /db_xref="CDD:439784" regulatory complement(1535142..1535147) /regulatory_class="ribosome_binding_site" gene complement(1535439..1536134) /locus_tag="lmo1505" /db_xref="GeneID:987751" CDS complement(1535439..1536134) /locus_tag="lmo1505" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465030.1" /db_xref="GeneID:987751" /translation="MTKVLTFENISYWYKTKDESILNDINYDFEAGVFYTVVGSSGSG KTTFLSLAGGLDTQKEGDIYYKGSSLKSIGLQQFRNKYVSIVFQSYNLLTYMTALQNV TTAMEITHVNQPDKKAFALSMLEKVGITEEMARQKVLTLSGGQQQRVSIARALCCETE LIVADEPTGNLDERTSKEVVTLFQDLAHKEGKCVIMVTHDPEIAKVSDVKLTLKNGSF VEKKQSMNSLINS" misc_feature complement(1535487..1536122) /locus_tag="lmo1505" /note="ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and Cell division ATP-binding protein FtsE; Region: ABC_MJ0796_LolCDE_FtsE; cd03255" /db_xref="CDD:213222" misc_feature complement(1535997..1536020) /locus_tag="lmo1505" /note="Walker A/P-loop; other site" /db_xref="CDD:213222" misc_feature complement(order(1535538..1535540,1535637..1535642, 1535871..1535873,1535994..1536002,1536006..1536011)) /locus_tag="lmo1505" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:213222" misc_feature complement(1535871..1535882) /locus_tag="lmo1505" /note="Q-loop/lid; other site" /db_xref="CDD:213222" misc_feature complement(1535685..1535714) /locus_tag="lmo1505" /note="ABC transporter signature motif; other site" /db_xref="CDD:213222" misc_feature complement(1535637..1535654) /locus_tag="lmo1505" /note="Walker B; other site" /db_xref="CDD:213222" misc_feature complement(1535619..1535630) /locus_tag="lmo1505" /note="D-loop; other site" /db_xref="CDD:213222" misc_feature complement(1535532..1535552) /locus_tag="lmo1505" /note="H-loop/switch region; other site" /db_xref="CDD:213222" regulatory complement(1536142..1536147) /regulatory_class="ribosome_binding_site" gene complement(1536143..1537648) /locus_tag="lmo1506" /db_xref="GeneID:987750" CDS complement(1536143..1537648) /locus_tag="lmo1506" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_465031.1" /db_xref="GeneID:987750" /translation="MNFFKRAWLSMKARKGRSVLQLIIFTVVCVLILSGFTIQSAADK ASELAREQLGGTVTLTVDREKQMQTMREEASSSDSSSTESKPQFQSSPIDVSDANDLA KLNHVASYNYYSSTQALASGFDPIESSGDTSSSNDESSTTAETQGPGGGQGGPQMVDA DLSISGLLDSATSTDFEAGTSELTSGVAITSADKDKNVAMVEENLAEENDWKVGDSFT VTSSDGNTKVTLKIVGIYKTTDSGSDMAQNFSFLNPYNKVYVPYTVANTIKGSDYKNT VDSAVYTMDDAANISAFEKEAKKVDSIDWDTFKLDANDTLYQQMIGPINSVASFSKNV VYIVSIAGALILGLLVMMQVRDRKYEMGVLLAIGEKRGKLIAQFFVEILIVALVSFGL AAASSHYVAQLAGNQLLAQQNSSTNETTTSTENRGPGGGGGQGGPGGFGQSVSNLTKN TEQIKELDIQVTLEDMLKMGGIGIGIAFISVLLPAALVLRMNPKTILTKQE" misc_feature complement(1536425..1537093) /locus_tag="lmo1506" /note="ABC-type transport system involved in lipoprotein release, permease component LolC [Cell wall/membrane/envelope biogenesis]; Region: LolE; COG4591" /db_xref="CDD:443648" regulatory complement(1537656..1537661) /regulatory_class="ribosome_binding_site" regulatory 1537798..1537803 /regulatory_class="ribosome_binding_site" gene 1537815..1538501 /locus_tag="lmo1507" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987756" CDS 1537815..1538501 /locus_tag="lmo1507" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="response regulator" /protein_id="NP_465032.1" /db_xref="GeneID:987756" /translation="MKLLMIEDNVSVCEMIEMFFMKEEIDATFVHDGKMGYEAFFKDD YDIAIIDLMLPNMDGMTICRKIREVSDVPIIILTAKESESDQVLGLEMGADDYVTKPF SPLTLMARIKAVTRRKNSATSTENNEDILETTYFKISKRTREIFYQDELLDALTPKEF DLLYFLMQHPRQVFSREQLLEQVWGYQFYGDERTVDVHIKRLRQKIATETKPFLHTVW GVGYKFDETE" misc_feature 1537815..1538498 /locus_tag="lmo1507" /note="two component system response regulator PieR; Region: resp_regPieR; NF041209" /db_xref="CDD:469113" gene 1538498..1539937 /locus_tag="lmo1508" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987753" CDS 1538498..1539937 /locus_tag="lmo1508" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="NP_465033.1" /db_xref="GeneID:987753" /translation="MKQMKFKYAYQLFFTQFIILLIACIMIGVLVSHSLKDYFYQSQV DDLTSYGQTISRDIRYSPQDATMQVLNTYQRILDVKKIHYTIKNANDETIYPTQMNQP LPKDFSISADDKKKLESGETVSKKIDNRFNKEMTIVYVPIMNGDKFVGSIVLNSPISG TEQVIGTINRYMFYTILLSITVALILSAILSKLQVNRINKLRAATKDVIQGNYNARLK ENNFDEIGALAIDFNKMTQTLETSQEEIERQEKRRRQFIADVSHEMRTPLTTISGLTE GLVNDIIPKSETDRCIALIDTEARRLTKLVNENLDYEKIRSNKIKLQKTRFNGKEFLE LIKEQLDYVASEKGNTITVAIDKDMAIYADYDRLTQVFINIVKNSVQFTENGQITLTG TQDYKESVLTITDTGIGMNTEELEQIWERFYKADMSRTNTAFGESGIGLSIVKQLIEY HDGSITVTSEPNKGTSFTIRLPFFQDNEQ" misc_feature 1538507..1539928 /locus_tag="lmo1508" /note="two component system sensor histidine kinase PieS; Region: his_kin_PieS; NF041210" /db_xref="CDD:469114" regulatory 1539946..1539971 /regulatory_class="terminator" regulatory complement(1539946..1539971) /regulatory_class="terminator" gene complement(1539979..1542375) /locus_tag="lmo1509" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987759" CDS complement(1539979..1542375) /locus_tag="lmo1509" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease V" /protein_id="NP_465034.1" /db_xref="GeneID:987759" /translation="MAEQESLALFDDTTEELFMKGTMLSTIFYNAENLFSVVRILVKE TNADWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAKFGQQFKADRFRKEMPQSRAGLI NYLSGELFKGIGKVTAENIVDTIGDDAITKILSDPSLLNTVPKLPSGAAESLLASLRE NQGLEHVMVGLNEYGFGPQLSMKIFQAYKQNAIEVLENNPYKLIEDVKGIGFQRADEL GRKLGLGGNHPERLRAGILFMLDSVCMQQGHVYMEQEVLLGEVTYLLEESEGIRIDQS ILVAQVEKLAEEQKIITENTRVYMPSLYYSESGFAYHVKRMLKQTEYQEQFPQSEFLL ALGELEERIGVHYGDSQRQALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVS LDPHAYKDGATFPVLLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQEQMDDDAERLI DGRLLIVDEMSMVDIWLANQLFRALPAHMQVVLVGDQDQLPSVGPGQVLKDILQSEQI PTVALSDIYRQKDGSSIIEMAHYIKEGMLPADFTKNSADRSFFHCTVNQIGDVVEQVV KNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGDIKYRVH DKVLQLINQPEKNVFNGDIGEIVSIIYAKENTEKQDLIVVQFDQTEVSYYRQEFNQLT HAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTGVTRSKQFLILCGEEEAFRMG IERIDENKRNTTLSERLMSEDVLLEQMTNKRILTAENITEIDPMIGMEGITPEQFMVG " misc_feature complement(1540105..1542318) /locus_tag="lmo1509" /note="helicase, putative, RecD/TraA family; Region: recD_rel; TIGR01448" /db_xref="CDD:273632" regulatory complement(1542385..1542390) /regulatory_class="ribosome_binding_site" gene complement(1542403..1543041) /locus_tag="lmo1510" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987762" CDS complement(1542403..1543041) /locus_tag="lmo1510" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465035.1" /db_xref="GeneID:987762" /translation="MQEGNLEEAVKLFTEVIEEHPSDPVGYINFGNVLLSMDDFERAE LFFKRALELDDTVPAAYYSLGNLYYELERYQEAADSFQNATKQGMENGDLFFMLGMSF VQMEELTLAMPYLLRSVELNPEDGEALFQYGIVLARSGFYEDAINMLERVLLVKPEDP DALYNIGAAYLAWQGDIVLAKNYFERAIATGASHELAENALNAIQDLENEAE" misc_feature complement(<1542406..1542993) /locus_tag="lmo1510" /note="Tetratricopeptide (TPR) repeat [General function prediction only]; Region: TPR; COG0457" /db_xref="CDD:440225" misc_feature complement(1542883..1542975) /locus_tag="lmo1510" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(1542784..1542870) /locus_tag="lmo1510" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(1542679..1542771) /locus_tag="lmo1510" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(1542583..1542666) /locus_tag="lmo1510" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(1542475..1542564) /locus_tag="lmo1510" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" regulatory complement(1543052..1543057) /regulatory_class="ribosome_binding_site" gene complement(1543082..1543822) /locus_tag="lmo1511" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987758" CDS complement(1543082..1543822) /locus_tag="lmo1511" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465036.1" /db_xref="GeneID:987758" /translation="MKKIAIFGSAIVLFCLLIWGYFYFNSEPSITAENAANSTKAVDV LEENDILVFTPRKSDADMSVILYPGAFVDALSYAPLANKLASSGYKTYIVEMPLNLAV FGKNRAADIIDEAPDEKFVIGGHSLGGVMSSRFAHDNENEIEGAFFLASYPDKKGSLK NASFPALSITATNDDVLNQDSYNKNKKYLPKDTTFVSIKGGNHAQFGSYGEQHGDGKA AISGPEQTYQVANALVTWLNTSVKNQER" misc_feature complement(1543142..1543636) /locus_tag="lmo1511" /note="Alpha/beta hydrolase family; Region: Abhydrolase_5; pfam12695" /db_xref="CDD:315383" regulatory complement(1543829..1543834) /regulatory_class="ribosome_binding_site" regulatory complement(1543901..1543931) /regulatory_class="terminator" gene complement(1543940..1545055) /gene="mnmA" /locus_tag="lmo1512" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987757" CDS complement(1543940..1545055) /gene="mnmA" /locus_tag="lmo1512" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs" /codon_start=1 /transl_table=11 /product="tRNA-specific 2-thiouridylase" /protein_id="NP_465037.1" /db_xref="GeneID:987757" /translation="MSTNNSDIRVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDD TDEFGVCTATEDYDDVIRVANQIGIPYYAVNFEKEYWDKVFTYFLDEYKLGRTPNPDV MCNKEIKFKAFLEHAESLGADYVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLS QDQLKKVMFPLGAMEKTEVREIAKKAGLATADKKDSTGICFIGERNFKQFLSEYLPAQ PGEMRTLDGEVLGKHDGLMYYTIGQRHGLGIGGDGEPWFVVGKDLKENVLFVEQGFHH ETLYSDSLIATDISFTTNAEKPKTIECTAKFRYRQTDTKVTVHLREDGTAEVVFADPV RAITPGQAVVFYDGDVCLGGGTIDTVWKNGQKLDYVG" misc_feature complement(1543970..1545031) /gene="mnmA" /locus_tag="lmo1512" /note="tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]; Region: MnmA; COG0482" /db_xref="CDD:440250" regulatory complement(1545064..1545069) /regulatory_class="ribosome_binding_site" gene complement(1545074..1546222) /locus_tag="lmo1513" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987764" CDS complement(1545074..1546222) /locus_tag="lmo1513" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="iron-sulfur cofactor synthesis protein" /protein_id="NP_465038.1" /db_xref="GeneID:987764" /translation="MENRIYLDHAATSPIHPEVIQTMLGAITNTYGNPSSIHYAGREA RKALDEARHTIAKSIHATEKEIIFTSGGTEGDNLALIGTALAHKENGTHIITSQIEHH AVLKTCEYLETQGFEVTYLPVDEHGIVSVESVQAALRPETILVSIMYGNNEIGSIQPI AEIGALLRDQQAIFHTDAVQAYGLLNINVMELGVDLLTTSSHKINGPRGVGFLYVKNG TRLAYQMHGGEQERKRRAGTENLAGICGFSAASSIMTNERELKNEEYISFKKRMAEIW RSAELDFEVNGLEADTLPHVFSVRFPGVSIEQLLMNLDMEGIAVSSGSACTAGTVDPS HVLVALFGENHPAIQETVRISFGLGNHLEEVEMAATKISEVVTRLMKI" misc_feature complement(1545077..1546216) /locus_tag="lmo1513" /note="Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family [Amino acid transport and metabolism]; Region: NifS; COG1104" /db_xref="CDD:440721" regulatory complement(1546232..1546237) /regulatory_class="ribosome_binding_site" gene 1546343..1546531 /locus_tag="lmos53" /db_xref="GeneID:18245197" misc_RNA 1546343..1546531 /locus_tag="lmos53" /product="ssrS" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245197" gene complement(1546608..1547885) /locus_tag="lmo1514" /db_xref="GeneID:987768" CDS complement(1546608..1547885) /locus_tag="lmo1514" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="recombination factor protein RarA" /protein_id="NP_465039.1" /db_xref="GeneID:987768" /translation="MAIQPLAYRMRPKALDEIVGQTHLVGKDKIINRMVKAKQLSSMI LYGPPGIGKTSIASAIAGSTKYAFRTLNAVTNNKKDMEVVAAEAKMSGTVILLLDEVH RLDKAKQDFLLPLLESGAIILIGATTSNPYIAINPAIRSRTQIFELKPLTIEDIMITM DRALSDKERGLGNYDVEIDEVAKKHFATASNGDVRSALNALELAVISSEPNEDGVIHI TLDVAEECLQKKSLAHDKDGDAHYDVLSAFQKSVRGSDVNAALHYMGRLIEAGDLVSI SRRMLVMAYEDIGLASPQAGAHTLAAIQTAEKVGFPEARIPLANAVIELCLSPKSNSA IMAIDAALADIRQGKSGEVPDHLRDGHYSVAEKLGRAIDYKYPHNYDNAWVDQQYLPD RLKNKLYYEPKFTSKFEQTIAGVYQKINENKAK" misc_feature complement(1546611..1547876) /locus_tag="lmo1514" /note="Replication-associated recombination protein RarA (DNA-dependent ATPase) [Replication, recombination and repair]; Region: RarA; COG2256" /db_xref="CDD:441857" regulatory complement(1547895..1547900) /regulatory_class="ribosome_binding_site" regulatory 1548018..1548023 /regulatory_class="ribosome_binding_site" gene 1548034..1548456 /locus_tag="lmo1515" /db_xref="GeneID:987766" CDS 1548034..1548456 /locus_tag="lmo1515" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465040.1" /db_xref="GeneID:987766" /translation="MKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQ LIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPIVLVESMEDEEAAQRE LWTRMRNAVRDVLDQTTLADLLKHSTDSELTDGYMFYI" misc_feature 1548040..1548411 /locus_tag="lmo1515" /note="Iron-dependent Transcriptional regulator; Region: Rrf2; pfam02082" /db_xref="CDD:396591" regulatory 1548465..1548482 /regulatory_class="terminator" regulatory 1548688..1548693 /regulatory_class="ribosome_binding_site" gene 1548701..1549906 /locus_tag="lmo1516" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987771" CDS 1548701..1549906 /locus_tag="lmo1516" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ammonium transporter NrgA" /protein_id="NP_465041.1" /db_xref="GeneID:987771" /translation="MESVFMFFCTLLVWLMTPGIALFYGGMVRRKNVLSTAMYSFSSM AIISILWVIVGYSLAFAPGNGFIGSFDWTFLHNVGFAANATYSDAIPHVLFMMFQMTF AILTVAIISGAFAERMNFSAYLIFIILWSLLVYSPVAHWVWGDGGWLRNLGALDFAGG NVVHISSGVTGLVLAIMIGRRKEADSASPHNLPLALIGGILVWFGWYGFNVGSALTID NVAMTAFVNTNTAAAAGIIGWGLVEWLTNKKPTMLGTISGAIAGLVSITPAAGFVTVP SSLIIGFFGGALCFWAVFWLKGKVKYDDALDAFGLHGIGGIWGGIATGLFATTKVNEA GADGLFYGNASLVVKQLIAIGSTVAYVAVVTALIVVIIKLFLPIRVNEEQEYKGLDLT LHGEKAYQE" misc_feature 1548710..1549903 /locus_tag="lmo1516" /note="Ammonia channel protein AmtB [Inorganic ion transport and metabolism]; Region: AmtB; COG0004" /db_xref="CDD:439775" regulatory 1549907..1549912 /regulatory_class="ribosome_binding_site" gene 1549920..1550285 /locus_tag="lmo1517" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987779" CDS 1549920..1550285 /locus_tag="lmo1517" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="nitrogen regulatory PII protein" /protein_id="NP_465042.1" /db_xref="GeneID:987779" /translation="MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKG FIELYRGTKKESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEV VKISTGETGIDALQDKPSK" misc_feature 1549935..1550264 /locus_tag="lmo1517" /note="Nitrogen regulatory protein PII [Signal transduction mechanisms, Amino acid transport and metabolism]; Region: GlnK; COG0347" /db_xref="CDD:440116" regulatory 1550416..1550421 /regulatory_class="ribosome_binding_site" gene 1550435..1550815 /locus_tag="lmo1518" /db_xref="GeneID:987772" CDS 1550435..1550815 /locus_tag="lmo1518" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1518" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465043.1" /db_xref="GeneID:987772" /translation="MRKIPIFTVLVAILLFGGYYLYQHASSKVDVTFNFVVDQKSKNN TITGKIDGAGNKSITLPLSEESWDAVKKGNRYNVEATFYNKNKISSSEAKELDGPFWS NDSNRGLLVNKVHVENIQELSDDF" regulatory 1550827..1550857 /regulatory_class="terminator" regulatory complement(1550827..1550846) /regulatory_class="terminator" gene complement(1550854..1552629) /gene="aspS" /locus_tag="lmo1519" /db_xref="GeneID:987778" CDS complement(1550854..1552629) /gene="aspS" /locus_tag="lmo1519" /EC_number="6.1.1.12" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes" /codon_start=1 /transl_table=11 /product="aspartyl-tRNA synthetase" /protein_id="NP_465044.1" /db_xref="GeneID:987778" /translation="MEKRTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDRE GIVQVVFNPEFSKEALEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEI TILNTSKTPPFYIEDGVNVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDAL GFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIV RCFRDEDLRGDRQPEFTQIDLETSFLTKEEIQAITEDMLVDVVKEAKNITIEKPFPRM TYKEAMDRFGSDKPDIRFGLELQNVSDVVKDVDFKVFQSAIENGGEVKAINAKAAAAN FSRKDLDALGVFVANYGAKGLAWLKVEAGELKGPIAKFFPEDKAAELKVALQAEDGDL LLFAADKADIVAASLGALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAERYVSAH HPFTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFT DESAKEQFGFLMDALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPL TNAPGEVSEAQLAELKLETVKKETN" misc_feature complement(1550863..1552623) /gene="aspS" /locus_tag="lmo1519" /note="Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: AspS; COG0173" /db_xref="CDD:439943" gene complement(1552632..1553909) /gene="hisS" /locus_tag="lmo1520" /db_xref="GeneID:987781" CDS complement(1552632..1553909) /gene="hisS" /locus_tag="lmo1520" /EC_number="6.1.1.21" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="histidyl-tRNA synthetase" /protein_id="NP_465045.1" /db_xref="GeneID:987781" /translation="MDLQLPRGTRDILPEEVSKWHFLETEFKNVCENYQYEEIRTPVF EHTELFERGVGDSTDIVSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQP IKMYYNEPMFRYERPQGGRQRQFTQMGIEALGSDDPSIDVEVISLAMEFFRKIGLTNI KLVINSLGDKESRLKHREALVAHFEPHIDEFCAECQVRLHKNPLRILDCKKDHDNPLI QSAPSILDFLNEESVAYFENVKNYLNALEIPFEIDPTMVRGLDYYNHTTFEIMSVEEG FGAKTTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLALEKADIEIPAKKPLEVYV ITAQPEAELKGVTLVNKLRQNGISAEKDYLKRKFKAQLKDANRKNAVYTIILGEEELQ TGNYQLKNMETGEQEAVSETTILEKLSNTKGEK" misc_feature complement(1552680..1553900) /gene="hisS" /locus_tag="lmo1520" /note="histidyl-tRNA synthetase; Region: hisS; TIGR00442" /db_xref="CDD:273080" regulatory complement(1552637..1552642) /regulatory_class="ribosome_binding_site" /gene="hisS" /locus_tag="lmo1520" regulatory complement(1553918..1553923) /regulatory_class="ribosome_binding_site" gene 1553972..1554200 /locus_tag="lmos54" /db_xref="GeneID:18245198" misc_RNA 1553972..1554200 /locus_tag="lmos54" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245198" regulatory 1554343..1554349 /regulatory_class="ribosome_binding_site" gene 1554360..1555643 /locus_tag="lmo1521" /db_xref="GeneID:987780" CDS 1554360..1555643 /locus_tag="lmo1521" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase" /protein_id="NP_465046.1" /db_xref="GeneID:987780" /translation="MKNKFIFITVVSILLIAAGIFTTIAMANANSVVVKAEVLNVRSG PGLAYDVTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAI VSSDGGLNVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIR ESVTKVDESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTT SGEEGYVANWVVDVSDKGQTSSPRSKTTKLSEATIVIDPGHGGNDPGAKGANGTIEKE MTLKTAKQLKQKLEARGAKVILTRNSDKYVSLKGRTNIAAENNADVFISIHFDSLEDA SKGVSGQTTYYYDNSDKSLAESINTTLGKDLPTTNRGARVGDYYVVRENSQPAVLLEL GYLSSAKDENNINSASYRSQIAESVTDGLSNYFSN" misc_feature 1554438..1554815 /locus_tag="lmo1521" /note="Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]; Region: YgiM; COG3103" /db_xref="CDD:442337" misc_feature 1554645..1555034 /locus_tag="lmo1521" /note="Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]; Region: YgiM; COG3103" /db_xref="CDD:442337" misc_feature 1555071..1555640 /locus_tag="lmo1521" /note="N-acetylmuramoyl-L-alanine amidase [Cell wall/membrane/envelope biogenesis]; Region: AmiC; COG0860" /db_xref="CDD:440621" regulatory 1555650..1555675 /regulatory_class="terminator" regulatory complement(1555653..1555672) /regulatory_class="terminator" gene complement(1555680..1556132) /locus_tag="lmo1522" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987785" CDS complement(1555680..1556132) /locus_tag="lmo1522" /experiment="EXISTENCE:[PMID:19448609]" /note="hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine" /codon_start=1 /transl_table=11 /product="D-tyrosyl-tRNA(Tyr) deacylase" /protein_id="NP_465047.1" /db_xref="GeneID:987785" /translation="MRVLLQRCYEASVSMEDEVISEIAGGLCLLVGFTHTDTPETVDY MAKKIVGLRIFEDESEKMNISLAERGGAILSVSQFTLYADVSRGKRPSFTKSAPGEKA EALYDLFNQKLAEAGFIVETGVFGAMMDVKIVNHGPVTIMLDSEEMRK" misc_feature complement(1555692..1556132) /locus_tag="lmo1522" /note="D-aminoacyl-tRNA deacylase [Translation, ribosomal structure and biogenesis]; Region: Dtd; COG1490" /db_xref="CDD:441099" regulatory complement(1556142..1556147) /regulatory_class="ribosome_binding_site" gene complement(1556148..1558364) /gene="relA" /locus_tag="lmo1523" /db_xref="GeneID:987788" CDS complement(1556148..1558364) /gene="relA" /locus_tag="lmo1523" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="(p)ppGpp synthetase" /protein_id="NP_465048.1" /db_xref="GeneID:987788" /translation="MAKEQNLTAEQVIDMASHYMNQEHLALVKKAYEFARDSHKEQFR KSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLV DGVTKLGKIKYKSHEEQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPVEKQ RRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARERYL HDVIDGVNENLDELNIQADISGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSIK DCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQ IAEYGVAAHWAYKEGKVVNSKTSFDNKLTWFREILEYQNESDNAEEFMESLKLDLFSD VVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDIID ILTSKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLVEKEIRQLGFEP KKIMAAENLRKLADKLNFSHEDDLFAAVGYNGITALQVANRLTEKLRKERELEAETEK LLTQSENKPSNSDANNEKLKIKHNAGVVVQGVGNLLIRLSRCCNPVPGDDIVGYITKG RGISIHRQDCPNVQAIEPERLIEVDWEDADSQAKNDYNVDIEIYGYNRNGLLNDILQV INSLTSNINGVNAKVDNNKMATLVVTLQIHNINHLQRVVDKIKQIPDVYTVRRLMN" misc_feature complement(1556151..1558358) /gene="relA" /locus_tag="lmo1523" /note="(p)ppGpp synthase/hydrolase, HD superfamily [Signal transduction mechanisms, Transcription]; Region: SpoT; COG0317" /db_xref="CDD:440086" regulatory complement(1558374..1558379) /regulatory_class="ribosome_binding_site" regulatory complement(1558538..1558561) /regulatory_class="terminator" gene complement(1558570..1559091) /gene="apt" /locus_tag="lmo1524" /db_xref="GeneID:987786" CDS complement(1558570..1559091) /gene="apt" /locus_tag="lmo1524" /EC_number="2.4.2.7" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis" /codon_start=1 /transl_table=11 /product="adenine phosphoribosyltransferase" /protein_id="NP_465049.1" /db_xref="GeneID:987786" /translation="MEIKDLQDYVAIVNDWPKKGIVFKDITPLMNDGEAYRFATDKIV EYAKELKIDIIVGPEARGFIIGCPVAYALGIGFAPVRKPGKLPRETIEMEYDLEYGTN KLSMHSDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGIVAGCAFLIELKELEGHK KLNGYDRLILMKL" misc_feature complement(1558576..1559091) /gene="apt" /locus_tag="lmo1524" /note="adenine phosphoribosyltransferase; Provisional; Region: PRK02304" /db_xref="CDD:235028" misc_feature complement(order(1558633..1558635,1558705..1558719, 1558723..1558731,1558909..1558911,1558915..1558917)) /gene="apt" /locus_tag="lmo1524" /note="active site" /db_xref="CDD:206754" gene complement(1559081..1561432) /locus_tag="lmo1525" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987789" CDS complement(1559081..1561432) /locus_tag="lmo1525" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="recombination protein RecJ" /protein_id="NP_465050.1" /db_xref="GeneID:987789" /translation="MIHSKYLWNIEEAAEDKASQLAEQLKISLPLAKLLWKRKITTQG QFDKFFHPEKYESYDPFLFAEMDLAVARIKQAIERNEQILVYGDYDADGVTSIAVLMK TLRHLGADADFYIPNRFTEGYGPNIAAFDMAKNQGTDLIITVDNGIAALEVMAHAKEI GLDVIVTDHHEPREIMPEAVAVIHPKHPKSAYPFDELAGVGVAYKLSHALLGEEPKEL LDLVAVGTVADLVSLTDENRLLVQLGLRQLRESANLGLAVLAKKASLKLEEATEETIG FGLAPRLNAVGRLGPADPAADLLLTEDPEEALFLAEEIDDANKERKQIVVDTTKLAME AIEAKDTLGNVLVVYGEGWNTGILGIVASKLVGTYSRPAIVLGIDPVTGIAKGSGRSV DAFHLYQALDKHRDLMMAFGGHPMAAGLTLPAENLTELEAKLQEEASYLSEEDFRPAL KIEEKIKLADVSVAFIAQLEKLAPFGMDNPKPIFLLENMHLKGTKRIGADKTHLKTML ATEKNDATLDSIGFGVGDLVDKISPTAAVDVVGELSINEWNNVKKPQLRMMDIHISHW QLFDVRNKSEWARILQEQTESRVFVCFEERTIGTLGEQNYILVNEKADFVADFQTEEL VFADMPTNIELVETIVRETKPERIFVHFDAAEGNQIPAIPDRLAFAELYSLIKKFQPF PIEKYTPRLMQKFGWNKEQIDFMSKVFFDLEFAKMDSGQIIINEVVEKRNLDESLVYQ QKVEEITTRKKLLYSNYTELHSWMKSMMETSIYPNAEELENGN" misc_feature complement(1559798..1561423) /locus_tag="lmo1525" /note="ssDNA-specific exonuclease RecJ, DHH superfamily, may be involved in archaeal DNA replication intiation [Replication, recombination and repair]; Region: RecJ; COG0608" /db_xref="CDD:440373" misc_feature complement(1559141..1559734) /locus_tag="lmo1525" /note="Single-strand DNA-specific exonuclease, C terminal domain; Region: ssDNA-exonuc_C; pfam10141" /db_xref="CDD:431083" regulatory complement(1559101..1559106) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1525" regulatory complement(1561442..1561447) /regulatory_class="ribosome_binding_site" regulatory complement(1561508..1561528) /regulatory_class="terminator" gene complement(1561538..1561882) /locus_tag="lmo1526" /db_xref="GeneID:987791" CDS complement(1561538..1561882) /locus_tag="lmo1526" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465051.1" /db_xref="GeneID:987791" /translation="MKENKVQWQVIAGIILALIIAIFAVINVDPVEVNFLFAQAEWPL ILIILGSVLCGCLIIFFLNIAKSRGMKKKVKQLTTEKAELERQLAAAKAMKTHSSKVE KRDTENAVDTTK" misc_feature complement(1561595..>1561810) /locus_tag="lmo1526" /note="Uncharacterized integral membrane protein YrvD [Function unknown]; Region: YrvD; COG5416" /db_xref="CDD:444169" regulatory complement(1561890..1561895) /regulatory_class="ribosome_binding_site" gene complement(1561978..1564242) /locus_tag="lmo1527" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987793" CDS complement(1561978..1564242) /locus_tag="lmo1527" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="preprotein translocase SecDF" /protein_id="NP_465052.1" /db_xref="GeneID:987793" /translation="MVKKSKIVIFFLVVAIIFGAVFGTAKMVMQNINLGLDLQGGFEV LYEVSPADGKGTVSKQTLTDTVTSLDKRVNSLGVAEPSIQIEGNNRIRVQLAGVTDQA EARKMLSTTAQLSFRDANDKMMMNGSDLVAGGAKQAFDSSNNPIVTLKLKSADKFASV TKTILAEAPDNQLVIWLDWKEGQKYKTEREKKDPAYLSAPNVSSVLDTDKVEISGSFT TEEAKDLAELLNSGALPVKMKEVYSTSVGAQFGQDALQETILAGIIGVIAIFIFMMAV YRLPGVIASITLVAYTYLVLLILSLLNATLTLPGIAGLILGIGMAVDANVITYERIKE EIKVGRSTKAAFEVGGKEAFRAILDGNLTTLIVAAVLFYFGTSSIKGFATVLIISILV SFLTAVWGSRFLLGLLVKSNWLNNKPGFFAVKRKDIHNLHEGINSFSLKTHFDRFDFV KHHRLFLSIFAAIVIVGIVILSIFRLNLGIDFASGTRAEVTANQTLTETQIKKDLDTI DMPSDDIVFQGSGSKTAVVSYKGTLSQNDVAKFKNYFEDKYKHEPSISTVSPTVGKEL AKNGFWALGVASVLIVLYIAVRFEFYMGIAAILSLLFDAFIIFIFFSVTRLEVDLTFI AAVLTVIGYSINDTIVTADRIRDISMKMQRFKTKEEIADAVNKALRQTFTRSINTILT VIFTVLALVLFGSESILNFSIALLVGLVSSVFSSIFMAMQLWYVFKARQLRKKGPIST VKKKKPRNNGQPVV" misc_feature complement(1561993..1564236) /locus_tag="lmo1527" /note="bifunctional preprotein translocase subunit SecD/SecF; Reviewed; Region: PRK13024" /db_xref="CDD:237276" regulatory complement(1564255..1564260) /regulatory_class="ribosome_binding_site" gene complement(1564343..1564633) /locus_tag="lmo1528" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987797" CDS complement(1564343..1564633) /locus_tag="lmo1528" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465053.1" /db_xref="GeneID:987797" /translation="MDRFSEWYEDLAPAISIKVEDFHILGYREIKASHIWAFLTEEKW KNGPTPALHERINDVMQMKIGQLMQFIMTTAEQESNNHVSQADSMLQPNVED" misc_feature complement(1564376..1564624) /locus_tag="lmo1528" /note="Post-transcriptional regulator; Region: Post_transc_reg; pfam13797" /db_xref="CDD:404651" regulatory complement(1564643..1564648) /regulatory_class="ribosome_binding_site" gene complement(1564776..1565105) /locus_tag="lmo1529" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987799" CDS complement(1564776..1565105) /locus_tag="lmo1529" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465054.1" /db_xref="GeneID:987799" /translation="MGGIVTFIPIILMIVLFYFLLIRPQQKRQKEVQNMQSSLAKGDK IITIGGLHGIVEAIEDGTVILKCGNSKLTFDRNAIRTVLEKGNAVSNPVVAETTSDDT EVVEDNK" misc_feature complement(1564836..1565105) /locus_tag="lmo1529" /note="Protein translocase subunit YajC [Intracellular trafficking, secretion, and vesicular transport]; Region: YajC; COG1862" /db_xref="CDD:441467" regulatory complement(1565114..1565119) /regulatory_class="ribosome_binding_site" gene complement(1565139..1566278) /gene="tgt" /locus_tag="lmo1530" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987798" CDS complement(1565139..1566278) /gene="tgt" /locus_tag="lmo1530" /EC_number="2.4.2.29" /experiment="EXISTENCE:[PMID:19448609]" /note="Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)" /codon_start=1 /transl_table=11 /product="queuine tRNA-ribosyltransferase" /protein_id="NP_465055.1" /db_xref="GeneID:987798" /translation="MSAIRYELIKTDKQTGARLGKIHTPHGTFDTPMFMPVGTLATVK TMSPEELKAMGAGIILSNTYHLWLRPGEELIREAGGLHKFMNWDQPILTDSGGFQVFS LSKMRDIKEEGVHFRNHLNGDKLFLSPEKAIQIQNALGSDIMMSFDECPPYPASHEYM KKSVERTSRWAERGLKAHVRPEDQGLFGIVQGGAYEDLRAQSAKDLVSLDFPGYSIGG LSVGEPKDVMNRVLEHTTPLLPANKPRYLMGVGSPDSLIDGVIRGVDMFDCVLPTRIA RNGTCMTSSGRLVIKNAKFTHDFRPIDENCDCYTCKNYSRAYIRHLIRCEETFGIRLT TYHNLHFLLNLMKQVRGAIMEDRLADFREEFFEQYGFNRPDAKNF" misc_feature complement(1565169..1566275) /gene="tgt" /locus_tag="lmo1530" /note="Queuine/archaeosine tRNA-ribosyltransferase [Translation, ribosomal structure and biogenesis]; Region: Tgt; COG0343" /db_xref="CDD:440112" regulatory complement(1566285..1566290) /regulatory_class="ribosome_binding_site" gene complement(1566365..1567393) /gene="queA" /locus_tag="lmo1531" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987806" CDS complement(1566365..1567393) /gene="queA" /locus_tag="lmo1531" /experiment="EXISTENCE:[PMID:19448609]" /note="Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine:tRNA ribosyltransferase-isomerase" /protein_id="NP_465056.1" /db_xref="GeneID:987806" /translation="MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGDIKDQHFT DIISYLNEGDALVLNDTRVLPARLHGIKDETGAHIEVLLLKQKEGNAWETLVKPAKRI RKGATITFGDGALKATCLEELEHGGRILEFSYEGIFYEVLEQLGEMPLPPYIKEQLAD QDRYQTVYAKENGSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVED TTNHKMHSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESG WTEIFISPGYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFS FGDAMFIH" misc_feature complement(1566371..1567393) /gene="queA" /locus_tag="lmo1531" /note="S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional; Region: queA; PRK00147" /db_xref="CDD:234666" gene complement(1567397..1568404) /gene="ruvB" /locus_tag="lmo1532" /db_xref="GeneID:987802" CDS complement(1567397..1568404) /gene="ruvB" /locus_tag="lmo1532" /EC_number="3.1.22.4" /experiment="EXISTENCE:[PMID:19448609]" /note="promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration" /codon_start=1 /transl_table=11 /product="Holliday junction DNA helicase RuvB" /protein_id="NP_465057.1" /db_xref="GeneID:987802" /translation="MDERIISSETVDAEEVSFETSLRPQNLSQYIGQDKVKNNLTVFI EAATLRNEALDHVLLYGPPGLGKTTLAMVIASEMGSQIKTTSGPAIERPGDLATILTS LEPGDVLFIDEIHRLSRAIEEILYPAMEDYCLDIVIGTGPTARSVRLDLPPFTLIGAT TRAGLLSAPLRDRFGVIDHLEFYTEEQLTEIVLRTSNILDTKIDDLGAREIARRSRGT PRIANRLLKRVRDFAQVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTIIQSFR GGPVGLDTIAASIGEERETIEDMQEPYLLQIGFLQRTPRGRIVTETAYNHLGISYEKE V" misc_feature complement(1567403..1568404) /gene="ruvB" /locus_tag="lmo1532" /note="Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB [Replication, recombination and repair]; Region: RuvB; COG2255" /db_xref="CDD:441856" regulatory complement(1567402..1567407) /regulatory_class="ribosome_binding_site" /gene="ruvB" /locus_tag="lmo1532" regulatory complement(1568412..1568417) /regulatory_class="ribosome_binding_site" gene complement(1568420..1569025) /gene="ruvA" /locus_tag="lmo1533" /db_xref="GeneID:987805" CDS complement(1568420..1569025) /gene="ruvA" /locus_tag="lmo1533" /experiment="EXISTENCE:[PMID:19448609]" /note="plays an essential role in ATP-dependent branch migration of the Holliday junction" /codon_start=1 /transl_table=11 /product="Holliday junction DNA helicase RuvA" /protein_id="NP_465058.1" /db_xref="GeneID:987805" /translation="MYDYIKGTVTTITPEYIVVEAGQIGYQIITGNPFSFQRLEGTEA QVFLYQHVREDNISLFGFQTTEERYLFKKLLSVSGIGPKSALAIIASGDVVPLISAIE SEDDVYLTKFPSVGKKTARQIILDLKGKLADVVASEIVYVAPENDMVAGLSPQLEEAV LALEALGYSTRELKKVIPKLAKEADLTSDAYIKLALQLMTK" misc_feature complement(1568429..1569025) /gene="ruvA" /locus_tag="lmo1533" /note="Holliday junction branch migration protein RuvA; Region: ruvA; PRK00116" /db_xref="CDD:234645" regulatory complement(1569035..1569040) /regulatory_class="ribosome_binding_site" gene complement(1569149..1570084) /locus_tag="lmo1534" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987808" CDS complement(1569149..1570084) /locus_tag="lmo1534" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="L-lactate dehydrogenase" /protein_id="NP_465059.1" /db_xref="GeneID:987808" /translation="MKPRKVMIIGAGNVGTAAAHAFVNQKFVEELILVDLNKERVEGN RKDLADAAAFMPGKMDITVRDASDCADVDIAVITVTAGPLKEGQTRLDELRSTSRIVS GIVPEMMKGGFNGIFLIATNPCDIITYQVWKLSGLPRERVLGTGVWLDTTRLRRLLAE KLDIAAQSIDAFILGEHGDSQFPVWSHSSIYGKPVNEYSLEKLGESLDLKQIGETARD TGFEIYHQKGCTEYGIGGTIVEICRHIFSGSQRALTVSCVLDGEYGESGLAIGVPAVL SQNGVKEIISLKLDEQEQQAFANSVSVIKKSIASI" misc_feature complement(1569155..1570075) /locus_tag="lmo1534" /note="L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases; Region: HicDH_like; cd05291" /db_xref="CDD:133427" misc_feature complement(order(1569224..1569229,1569251..1569253, 1569329..1569331,1569335..1569349,1569506..1569511, 1569524..1569526,1569581..1569583,1569590..1569592, 1569596..1569598,1569911..1569913,1569998..1570000, 1570073..1570075)) /locus_tag="lmo1534" /note="tetramer (dimer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:133427" misc_feature complement(order(1569554..1569556,1569650..1569652, 1569719..1569727,1569842..1569853,1569977..1569982, 1570043..1570051)) /locus_tag="lmo1534" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:133427" misc_feature complement(order(1569365..1569367,1569377..1569379, 1569386..1569394,1569404..1569409,1569584..1569586, 1569620..1569622,1569626..1569631,1569923..1569928, 1569935..1569949,1569953..1569955,1570010..1570015, 1570025..1570027,1570034..1570039)) /locus_tag="lmo1534" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133427" misc_feature complement(order(1569395..1569397,1569425..1569427, 1569554..1569556,1569626..1569628,1569719..1569721, 1569815..1569817)) /locus_tag="lmo1534" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133427" regulatory complement(1570093..1570098) /regulatory_class="ribosome_binding_site" gene complement(1570154..1570879) /locus_tag="lmo1535" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987810" CDS complement(1570154..1570879) /locus_tag="lmo1535" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465060.1" /db_xref="GeneID:987810" /translation="MSGHSKWNNIQGRKNAQDSKRSKVFQKLAREIFVAAKKGPDPSL NPSLRLVMDKAKAVNMPNDNIKRAIDKASGNTSGENYDEVTYEGYAPGGIAVLVHALT DNKNRTSTNVRVAFNKNGGSLGETGSVSYMFDRKGYLVILREGLTVDEEEFMLEAIEA GADDVEVSEDVFEIFTDPATFSEVKEALQEAGYTFATAELSMFPTVYNEIAENNQTQF DKMLEALEDDDDVQEVYTNAEIN" misc_feature complement(1570160..1570879) /locus_tag="lmo1535" /note="YebC/PmpR family DNA-binding transcriptional regulator; Region: PRK00110" /db_xref="CDD:234640" regulatory complement(1570887..1570892) /regulatory_class="ribosome_binding_site" regulatory complement(1570959..1570982) /regulatory_class="terminator" gene complement(1570990..1571838) /locus_tag="lmo1536" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987813" CDS complement(1570990..1571838) /locus_tag="lmo1536" /EC_number="4.2.1.51" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis" /codon_start=1 /transl_table=11 /product="prephenate dehydratase" /protein_id="NP_465061.1" /db_xref="GeneID:987813" /translation="MKIAYLGPAASFTHSAAAKAFPKEEMIAKSTIPDCIMAIEKEDV DVAVVPIENTIEGSVNITLDYLFHFSSVPVVAEIVLPIAQHLMVHPAHVSAWKSVQKV MSHPQALAQCHTFLQAELYGVEREVTPSTAYAAKWVSNNPTELVAAIAPRMAANEYGL EIVKENAQDLELNQTRFFVLSRKPVSILLPKEEEKTSISVILPNNMPGALHKVLSTFA WRDIDLSKIESRPLKTSLGEYFFLIDVLSEGKEVLVTNALDEITLLGGTANKLGTYHV HRLQTN" misc_feature complement(1570996..1571838) /locus_tag="lmo1536" /note="prephenate dehydratase; Provisional; Region: PRK11898" /db_xref="CDD:237013" regulatory complement(1571846..1571851) /regulatory_class="ribosome_binding_site" regulatory complement(1571873..1571897) /regulatory_class="terminator" gene complement(1571905..1573194) /gene="obgE" /locus_tag="lmo1537" /gene_synonym="cgtA; obg; yhbZ" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987811" CDS complement(1571905..1573194) /gene="obgE" /locus_tag="lmo1537" /gene_synonym="cgtA; obg; yhbZ" /experiment="EXISTENCE:[PMID:19448609]" /note="essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication" /codon_start=1 /transl_table=11 /product="GTPase ObgE" /protein_id="NP_465062.1" /db_xref="GeneID:987811" /translation="MFVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADV VFVVDEGLRTLVDFRFKRIFKAEHGEHGMSKSMHGRGAEDLVVKVPQGTIVKDIDTGE IIADLVAHGQRAVIAKAGRGGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLAD VGLVGFPSVGKSTLLSVVSAARPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIE GASQGVGLGHQFLRHIERTRVIVHVIDMSGSEGRVPYEDYMAINNELEQYNLRLMERP QIIVANKMDMPDAEENLNEFKTKIAEDIPVFPISAVTKTGLRELLLAIADKLETTPEF PLNEILEQEDEDTVLYKYVAEEPDFEISREPDGTFVLSGAKIERLFTMTNFERDASIS RFARQLRAMGVDEALRKRGAKDGDIVRLLDYEFEFMD" misc_feature complement(1571908..1573194) /gene="obgE" /locus_tag="lmo1537" /gene_synonym="cgtA; obg; yhbZ" /note="GTPase CgtA; Reviewed; Region: obgE; PRK12297" /db_xref="CDD:237046" regulatory complement(1573206..1573211) /regulatory_class="ribosome_binding_site" regulatory complement(1573313..1573342) /regulatory_class="terminator" gene complement(1573354..1574847) /gene="glpK" /locus_tag="lmo1538" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987807" CDS complement(1573354..1574847) /gene="glpK" /locus_tag="lmo1538" /EC_number="2.7.1.30" /experiment="EXISTENCE:[PMID:19448609]" /note="Converts glycerol and ADP to glycerol-3-phosphate and ADP" /codon_start=1 /transl_table=11 /product="glycerol kinase" /protein_id="NP_465063.1" /db_xref="GeneID:987807" /translation="MEKKYILALDQGTTSSRAMIIDEEGEVIGVAQEEFDQIFPKPGW VEHNANEIWASILAVIAGVLLKTNISSKEIAGIGITNQRETTVIWDKESGNPIYNAIV WQSRQTEDICKQLRKDGYEDTIRSKTGLLIDPYFAGTKARWILDHVDGAQERAEKGEL LFGTIDTWLVWKLTGGRAHITDYSNASRTLLYNIYDLEWDDELLKMLNIPKAMLPEVR PSSEVYADTVPYHFFGEEVPVAGIAGDQQAALFGQGCFEKGMAKNTYGTGCFLLMNTG EKAVRSENGLLTTLAWGIDGKVEYALEGSIFVAGSAIQWLRDGLRMVRQSSDSENYAS RIESSDGVYVVPAFVGLGAPYWDSDVRGAVFGLTRGTEKEQFIRATLESLAYQTRDVL YAMEQDSGISLKTLRVDGGASANNFLMQFQSDILGVPVERPENKETTVLGAAFLAGLA VGVWKDKNEIKKHWKLDKRFEVEMKEEQREDLYEGWHKAVKAAQAFK" misc_feature complement(1573357..1574847) /gene="glpK" /locus_tag="lmo1538" /note="glycerol kinase GlpK; Region: glpK; PRK00047" /db_xref="CDD:234594" regulatory complement(1574856..1574861) /regulatory_class="ribosome_binding_site" gene complement(1574922..1575740) /locus_tag="lmo1539" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987817" CDS complement(1574922..1575740) /locus_tag="lmo1539" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycerol transporter" /protein_id="NP_465064.1" /db_xref="GeneID:987817" /translation="MIDTSLATQFLGEVIGTAILIILGAGVVAGVSLKRSKAENGGWV VITLAWGLGVTMGVYVSGYMSMAHLNPAVTIGMALAGAFPWNYVLPYILAQFIGAFIG ATLIWLHYYPHWKQTEDKPTKLGVFATAPAIRHFTSNFFGEALGTFILVFGLLSLGAN SFSDGLNPLVVGALIVAIGMSLGGTTGYAINPARDLGPRIAHFVWPISGKGGSDWGYS WVPVIGPIMGGALGALGYNAIINGELGMWFWVFAVLFVLILILTMQLDKKKDLA" misc_feature complement(1575021..1575728) /locus_tag="lmo1539" /note="Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) [Carbohydrate transport and metabolism]; Region: GlpF; COG0580" /db_xref="CDD:440345" regulatory complement(1575749..1575754) /regulatory_class="ribosome_binding_site" regulatory complement(1576076..1576091) /regulatory_class="terminator" gene complement(1576107..1576397) /gene="rpmA" /locus_tag="lmo1540" /db_xref="GeneID:987815" CDS complement(1576107..1576397) /gene="rpmA" /locus_tag="lmo1540" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in the peptidyltransferase reaction during translation" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L27" /protein_id="NP_465065.1" /db_xref="GeneID:987815" /translation="MLKFDIQHFAHKKGGGSTSNGRDSESKRLGAKRADGQFVTGGSI LYRQRGTKIYPGTNVGRGGDDTLFAKTDGVVRFERMGRDKKKVSVYPEVQEA" misc_feature complement(1576128..1576373) /gene="rpmA" /locus_tag="lmo1540" /note="50S ribosomal protein L27; Validated; Region: rpmA; PRK05435" /db_xref="CDD:235464" regulatory complement(1576407..1576412) /regulatory_class="ribosome_binding_site" gene complement(1576411..1576728) /locus_tag="lmo1541" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987818" CDS complement(1576411..1576728) /locus_tag="lmo1541" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465066.1" /db_xref="GeneID:987818" /translation="MIQVDVMREDNQIISFTMSGHADFAEHGSDLVCAGASSIAFGMV NAISEVRDFDPVIEESEGYLYYSVPADYVGDDVVQILLTGMENQLRSLAYSYPDHIKI NSK" misc_feature complement(1576414..1576728) /locus_tag="lmo1541" /note="ribosomal-processing cysteine protease Prp; Region: PRK14553" /db_xref="CDD:184740" misc_feature complement(order(1576456..1576458,1576465..1576470, 1576477..1576482,1576486..1576491,1576498..1576500, 1576591..1576596,1576603..1576605,1576612..1576617, 1576624..1576629,1576636..1576641)) /locus_tag="lmo1541" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:381747" regulatory complement(1576735..1576740) /regulatory_class="ribosome_binding_site" gene complement(1576747..1577055) /gene="rplU" /locus_tag="lmo1542" /db_xref="GeneID:987770" CDS complement(1576747..1577055) /gene="rplU" /locus_tag="lmo1542" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L21" /protein_id="NP_465067.1" /db_xref="GeneID:987770" /translation="MYAIIETGGKQIKVEAGQEIYVEKLAGEVGDVVTFDKVLFVGGD SAKVGVPFVEGATVTAKVEKQGRAKKLTVYKYKPKKNYHKKQGHRQPYTKLTIDAINA " misc_feature complement(1576750..1577055) /gene="rplU" /locus_tag="lmo1542" /note="50S ribosomal protein L21; Validated; Region: rplU; PRK05573" /db_xref="CDD:235510" regulatory complement(1577063..1577068) /regulatory_class="ribosome_binding_site" gene 1577068..1577146 /locus_tag="lmos55" /db_xref="GeneID:18245199" misc_RNA 1577068..1577146 /locus_tag="lmos55" /product="L21" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245199" gene complement(1577212..1578573) /locus_tag="lmo1543" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987819" CDS complement(1577212..1578573) /locus_tag="lmo1543" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ribonuclease G" /protein_id="NP_465068.1" /db_xref="GeneID:987819" /translation="MKKLIVSAAPIEKRVVAMEDDLLIDIEIVRPSEKVQVGDIYYGF IQKIDRKVEAAFVDLGNNNKGFIHLKDIPESYDKTQGAKIPVQIVREGSVTKLPLLTG ILEFSGDLLIYLYGKEYISVSKRIEDKITLKKIMETMVEENEAIIIRSNAEFATKEQL QQALVQARDKYQTLVKEASKRKKPGLLLSAASGILNSTKQFIQRYAPSEVITDDFEFA KMLEMIYPDKQIILKKSADLFADLGIKAQMDRLARPVVHLSNGSSLFIEKTEAMWVVD VNSGKFKGTTVKEKTVESVNLKAVPEILRQIRLRNMSGMILVDFIGGMSEAGYTELYA ALESQTREEYITTQVAALSQSGLLQLTRRKKQQSFLETTTMPCPVCYATGHVASKETL AFELERELSGIMQNEPNSIQIITTEDVLETFLDLNTLSNAPIDWEVADERVPFYQIAR VEN" misc_feature complement(1577299..1578570) /locus_tag="lmo1543" /note="Ribonuclease G or E [Translation, ribosomal structure and biogenesis]; Region: CafA; COG1530" /db_xref="CDD:441139" regulatory complement(1578578..1578583) /regulatory_class="ribosome_binding_site" gene complement(1578625..1579425) /gene="minD" /locus_tag="lmo1544" /db_xref="GeneID:987814" CDS complement(1578625..1579425) /gene="minD" /locus_tag="lmo1544" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="septum formation inhibitor MinD" /protein_id="NP_465069.1" /db_xref="GeneID:987814" /translation="MGEAIVITSGKGGVGKTTSTANLGTALALQGKKVCLIDMDIGLR NLDVVLGLENRIIYDLVDVVEGRCKIHQAMIKDKRFDDLLFLLPAAQTTDKNAVSGEQ MVDLINQLRPDYDFILIDCPAGIETGYKNAVAGADKAIVVTTPEISAVRDADRIIGLL EKEDIEPPKLIINRIRTQMMMNGDVMDIDEITTHLSIELLGIIIDDDEVIRSSNSGDP VAMLPNNRASQGYRNIARRILGESIPLMSIETKKAGFFARLKQLFSGK" misc_feature complement(1578649..1579425) /gene="minD" /locus_tag="lmo1544" /note="Septum site-determining ATPase MinD [Cell cycle control, cell division, chromosome partitioning]; Region: MinD; COG2894" /db_xref="CDD:442139" gene complement(1579428..1580105) /gene="minC" /locus_tag="lmo1545" /db_xref="GeneID:987769" CDS complement(1579428..1580105) /gene="minC" /locus_tag="lmo1545" /experiment="EXISTENCE:[PMID:19448609]" /note="blocks the formation of polar Z-ring septums" /codon_start=1 /transl_table=11 /product="septum formation inhibitor MinC" /protein_id="NP_465070.1" /db_xref="GeneID:987769" /translation="MKKNVQIKGTKDGISIFLSDKASISELQQELTQLLADQKQNPYS GEKLEVQVQIGNRLFSEEEELEISTIIHENSQMEISAFYSNVMSKDEAKKWKENDQIF SMATIIRSGQVVQVPGDFLLIGDVNPGGQIRSNGNVFVLGNIKGIIHAGFEGNENAVV AGKFLYPSQVRIADKVYGFDSEDYKEVTETDLFSAFVNDAGEIVIDGIHKIRKIRPEI SNFQGGR" misc_feature complement(1579458..1580105) /gene="minC" /locus_tag="lmo1545" /note="septum formation inhibitor; Reviewed; Region: minC; PRK00513" /db_xref="CDD:179052" regulatory complement(1579435..1579440) /regulatory_class="ribosome_binding_site" /gene="minC" /locus_tag="lmo1545" regulatory complement(1580115..1580120) /regulatory_class="ribosome_binding_site" gene complement(1580283..1580801) /gene="mreD" /locus_tag="lmo1546" /db_xref="GeneID:986901" CDS complement(1580283..1580801) /gene="mreD" /locus_tag="lmo1546" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell-shape determining protein MreD" /protein_id="NP_465071.1" /db_xref="GeneID:986901" /translation="MNVKKNIALPAIMVVTFILEGVFSLQFANGLFNDRHLFIPHFLL IMLTIMTCFYKRNTTLAYAFILGLLFDIYYTGVMGIYFAIFPFTVYITDKFMKVLQNN ILLVGLIAIFNIILTESLVYAFYYLIGTTTMSIPVFIDQRLWTTILINLAFFLVVFFP FRLFLDRLVKSE" misc_feature complement(1580286..1580777) /gene="mreD" /locus_tag="lmo1546" /note="Cell shape-determining protein MreD [Cell wall/membrane/envelope biogenesis]; Region: MreD; COG2891" /db_xref="CDD:442136" gene complement(1580804..1581691) /gene="mreC" /locus_tag="lmo1547" /db_xref="GeneID:986941" CDS complement(1580804..1581691) /gene="mreC" /locus_tag="lmo1547" /experiment="EXISTENCE:[PMID:19448609]" /note="in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall" /codon_start=1 /transl_table=11 /product="rod shape-determining protein MreC" /protein_id="NP_465072.1" /db_xref="GeneID:986941" /translation="MPQFFLNKRLIILLISIIVLVALVGFSLRDRENASWPEQFVKDV VGFGENIVAKPTSFISGAVDGVVDLKNTYTENQHLKERLEELAQLESEVADLKKENKD LKESLDITDSIRDYDPLNASVISRNPTNWNDQVEIDKGSSDGVKPDMAVTTPSGLIGK VTTTGAKSATVELLTSSDVKNRVSAKVQGKENAFGIINGYDSDTKLLELKQLPYDMKF KKGQKVVTSGLGGKFPAGIFIGTIEKVETDKMGLSQTAFIKPGADMYDLNHVTVLKRS AEAGTTDDDTTSSDTTGGQ" misc_feature complement(1580858..1581691) /gene="mreC" /locus_tag="lmo1547" /note="rod shape-determining protein MreC; Provisional; Region: PRK13922" /db_xref="CDD:237560" regulatory complement(1580811..1580816) /regulatory_class="ribosome_binding_site" /gene="mreC" /locus_tag="lmo1547" regulatory complement(1581696..1581701) /regulatory_class="ribosome_binding_site" gene complement(1581777..1582790) /gene="mreB" /locus_tag="lmo1548" /db_xref="GeneID:986954" CDS complement(1581777..1582790) /gene="mreB" /locus_tag="lmo1548" /experiment="EXISTENCE:[PMID:19448609]" /note="functions in MreBCD complex in some organisms" /codon_start=1 /transl_table=11 /product="rod shape-determining protein MreB" /protein_id="NP_465073.1" /db_xref="GeneID:986954" /translation="MFGFGNKDIGIDLGTANTLVYMKGKGIVLREPSVVAMKKDTQEI VAVGSDAKNMIGRTPGNIVAIRPMKDGVIADYDTTAAMMKYYIQKAGKSVNASKPRVM ICVPSGITGVEKRAVIDATRQAGAKDAFTIEEPFAAAIGAGLPVGEPTGSMVVDIGGG TTEVAVISLGGIVTSRSVRTAGDDLDEVIINYIRKKYNLLIGDRTAEAIKMEIGSASP KGLDLSPFSIRGRDLVTGLPKTIEITPEEISEALADTVAAIIDAVKGTLENTPPELSA DIMDKGIVLTGGGALLRNLDTVISEETKMPVIIADEPLDCVAIGTGKALENMDMYKRK KMN" misc_feature complement(1581783..1582787) /gene="mreB" /locus_tag="lmo1548" /note="rod shape-determining protein MreB; Provisional; Region: PRK13927" /db_xref="CDD:237562" regulatory complement(1582797..1582802) /regulatory_class="ribosome_binding_site" gene complement(1583242..1583916) /gene="radC" /locus_tag="lmo1549" /db_xref="GeneID:986979" CDS complement(1583242..1583916) /gene="radC" /locus_tag="lmo1549" /experiment="EXISTENCE:[PMID:19448609]" /note="Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase" /codon_start=1 /transl_table=11 /product="DNA repair protein RadC" /protein_id="NP_465074.1" /db_xref="GeneID:986979" /translation="MLTHEISENEKPREKLQNYGIEALSSSELVALIIETGTKNESVL TIANRIIMKFKNVGEMQYASIEEFQLVNGIGIAKASKIMAAIELGRRISIVTEQEEVV VRCPEDAVKLVMPELAFLFQEHFHCLFLNTKNQVIYRQTIFVGGLNASIVHPREVFRL ALRKSAASIMCFHNHPSGDPTPSSEDLLVTKRLAEAGNIVGITLLDHIIIGKNKYISL KEKGYF" misc_feature complement(1583245..1583916) /gene="radC" /locus_tag="lmo1549" /note="DNA repair protein RadC; Region: PRK00024" /db_xref="CDD:178801" regulatory complement(1583924..1583929) /regulatory_class="ribosome_binding_site" gene complement(1583928..1584638) /gene="comC" /locus_tag="lmo1550" /db_xref="GeneID:986994" CDS complement(1583928..1584638) /gene="comC" /locus_tag="lmo1550" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein ComC" /protein_id="NP_465075.1" /db_xref="GeneID:986994" /translation="MIYFLLAIYSAVFMSFIQVAGECFPVKKSFLFRFSECNYCQKKL AFYHIIPIFSFLFFRGKSRCCERPIPIIYFLMELVTPIYILLLYIQFSFSYSFLLYYI IYYFLAFFFITDIFYLYVPNSILIVFFCVLATIAILYNQSLMDLIYSGGISCLFYLLF FIIFRKGIGLGDIKILIILSTFLGFKIGYYIFFLAIIMGTIILLTALMLKKVKKNKQV PFVPYIFVSFLLISILMK" misc_feature complement(1583937..1584638) /gene="comC" /locus_tag="lmo1550" /note="Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase [Cell motility, Intracellular trafficking, secretion, and vesicular transport]; Region: PulO; COG1989" /db_xref="CDD:441592" gene 1584586..1584808 /locus_tag="lmos56" /db_xref="GeneID:18245200" misc_RNA 1584586..1584808 /locus_tag="lmos56" /product="rliE" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245200" regulatory complement(1584645..1584650) /regulatory_class="ribosome_binding_site" regulatory complement(1584835..1584863) /regulatory_class="terminator" gene complement(1584850..1586139) /gene="folC" /locus_tag="lmo1551" /db_xref="GeneID:986919" CDS complement(1584850..1586139) /gene="folC" /locus_tag="lmo1551" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="folyl-polyglutamate synthetase" /protein_id="NP_465076.1" /db_xref="GeneID:986919" /translation="MTLNSYEEALDWIHGTLRLGIKPGLARMEYMMEKLNHPEKANKW VHIAGTNGKGSTLTFVRNALEEAGYKAGTFTSPYIEVFNERISVNGEPISDEMIVSLA NRIKPIAEELEKTVYGPPSEFEIITAMMFLCFADYVSIDIGIIEVGLGGRLDSTNILV PLVSVITTIGMDHMEFLGDTIEQIASEKAGIIKPGIPVVSGAIQKEAQEVIAEIATKN KSNVTQLNKAFSMHNENGNITYKTIYGEEISNLSIGLFGLHQLNNAAVAIKVLQYLNT FSTFEIDLAAIRKGLEKAFWPGRMEKIISNPFIMLDGAHNPEGIKTFAHSVQKYPGPK KIIVSILADKNYQEMLAMLKSIPNAEIILTTFDYPRAMMAEEVIQIGKNEGISLNPDW QQALNNLYETETNTKIFITGSLYFISEVRKYLLASIR" misc_feature complement(1584865..1586130) /gene="folC" /locus_tag="lmo1551" /note="Folylpolyglutamate synthase/Dihydropteroate synthase [Coenzyme transport and metabolism]; Region: FolC; COG0285" /db_xref="CDD:440054" regulatory complement(1586148..1586153) /regulatory_class="ribosome_binding_site" gene complement(1586201..1588852) /gene="valS" /locus_tag="lmo1552" /db_xref="GeneID:986904" CDS complement(1586201..1588852) /gene="valS" /locus_tag="lmo1552" /EC_number="6.1.1.9" /experiment="EXISTENCE:[PMID:19448609]" /note="valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain" /codon_start=1 /transl_table=11 /product="valyl-tRNA synthetase" /protein_id="NP_465077.1" /db_xref="GeneID:986904" /translation="MTTEHNEINMPTKYEPSNVEAGKYKWWLEKEFFKAEGNTDKEPY SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAKVEAK LKESNISRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSDA VKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKYPLTDGSGY LEVATTRPETIPGDTAVAVHPKDERYQHLIGKTIMLPILNREIPIVADEYVEREFGSG AVKITPAHDPNDFEVGNRHNLPRIIVMHEDGTMNENAGKYDGLDRFVARKEIIQDFKD LGLFIKQEPHLHSVGHSERTGAVVEPYLSLQWFVKMEPLAAEALELQKTENKVNFVPA RFEKTYETWMDNIHDWCISRQLWWGHRIPAWYHKETGEIYVGEKEPENLSEWEQDEDV LDTWFSSALWPFSTMGWPDTESPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGE RPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKF SYEKVESTWNFINKIWNASRFVLMNLDGMKYNEIDLSNVTEVSDKWILTRLNETIQAV TSLGEKYEFGEVGRTLYNFIWDDFCDWYIEIAKIPLYGEDEVAKQTTRSVLAYTLNAT MRLLHPFMPFVTEEIWQNLPHEGESITIAEWPKVNEQQIDTKSSTAMATLVEVIRAVR NIRSEVNTPLSKPIVLEIKPKDTTYKEILEQNISYIERFCNPEQVTISFDVEASKTAM TAVVSGAEIFIPLEALIDLNVEIARLEKELEKWNKEVARVQGKLNNERFISKAPESVV AEERLKEKDYLDKKASVLERIETLKEV" misc_feature complement(1586210..1588828) /gene="valS" /locus_tag="lmo1552" /note="Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: ValS; COG0525" /db_xref="CDD:440291" regulatory complement(1588860..1588865) /regulatory_class="ribosome_binding_site" gene 1588901..1589127 /locus_tag="lmos57" /db_xref="GeneID:18245201" misc_RNA 1588901..1589127 /locus_tag="lmos57" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245201" gene complement(1589175..1590464) /gene="hemL" /locus_tag="lmo1553" /db_xref="GeneID:986918" CDS complement(1589175..1590464) /gene="hemL" /locus_tag="lmo1553" /EC_number="5.4.3.8" /experiment="EXISTENCE:[PMID:19448609]" /note="Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway" /codon_start=1 /transl_table=11 /product="glutamate-1-semialdehyde aminotransferase" /protein_id="NP_465078.1" /db_xref="GeneID:986918" /translation="MQNYSKSEKAFKEAKKVLPGGVNSPVRAFNSVDASPVFMDHGKG AYITDVDGNEYIDYVLSWGPLILGHTDPAVVNAITKAALKGTSFGTPTEIETELAKLV IERVPSIEIVRMVSSGTEATMSAIRLARGYTKREKILKFEGSYHGHGDSLLIKAGSGV ATLGLPDSPGVTKGLAADTITVPYNDIEGAKLAFEKYGEEIAAVIVEPVAGNMGVVPP IEGFLEGLRELTTKFGSLLIFDEVMTGFRVDYYSAQGYYVVTPDLTCLGKVIGGGLPV GAYGGKKEIMEQIAPAGSIYQAGTLSGNPLAMNAGFETVRQLTPQHYDVFRTLIKRME EGLTEISARRQVPLSINKAGSMFGFFFTDQKVINFDTAKTSNLEFFRNYYREMLGQGI FLPPSQFEGVFISTMHTENEIDKTLEAFDTTCKILRG" misc_feature complement(1589181..1590455) /gene="hemL" /locus_tag="lmo1553" /note="glutamate-1-semialdehyde 2,1-aminomutase; Region: PRK00062" /db_xref="CDD:234607" misc_feature complement(order(1589661..1589663,1589736..1589741, 1589745..1589747,1589844..1589846,1590021..1590023, 1590027..1590032,1590108..1590116)) /gene="hemL" /locus_tag="lmo1553" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99735" misc_feature complement(order(1589661..1589663,1589736..1589738, 1589745..1589747,1589844..1589846,1590027..1590032, 1590108..1590113)) /gene="hemL" /locus_tag="lmo1553" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature complement(1589661..1589663) /gene="hemL" /locus_tag="lmo1553" /note="catalytic residue [active]" /db_xref="CDD:99735" regulatory complement(1590473..1590478) /regulatory_class="ribosome_binding_site" gene complement(1590477..1591451) /gene="hemB" /locus_tag="lmo1554" /db_xref="GeneID:986926" CDS complement(1590477..1591451) /gene="hemB" /locus_tag="lmo1554" /EC_number="4.2.1.24" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of porphobilinogen from 5-aminolevulinate" /codon_start=1 /transl_table=11 /product="delta-aminolevulinic acid dehydratase" /protein_id="NP_465079.1" /db_xref="GeneID:986926" /translation="MKNQFDRHRRLRKTKTMRDLVRETVLHTDDLIYPIFVKDGKEPK TEVVSMPGVFQYPLHELEEEMRVVESLGIKAVILFGIPAEKDAVGTQAYHDHGIIQEA TRLIKKSFPKILVVADTCLCEFTDHGHCGVIENGEILNDESLELLKQTAVSQAAAGAD IIAPSNMMDGFVQVIREGLDEAGFYDIPIMSYAVKYASAFYGPFRDAAGSAPQFGDRK SYQMDPANREEALREAKSDEQEGADFLIVKPSLSYLDIMRDVKNNTNLPVVAYNVSGE YAMVKAAAQNGWIDEEKIVIEMLTSMKRAGATLIITYFAKDVSKYLNK" misc_feature complement(1590480..1591439) /gene="hemB" /locus_tag="lmo1554" /note="Delta-aminolevulinic acid dehydratase, porphobilinogen synthase [Coenzyme transport and metabolism]; Region: HemB; COG0113" /db_xref="CDD:439883" gene complement(1591448..1592170) /gene="hemD" /locus_tag="lmo1555" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986929" CDS complement(1591448..1592170) /gene="hemD" /locus_tag="lmo1555" /EC_number="4.2.1.75" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis" /codon_start=1 /transl_table=11 /product="uroporphyrinogen-III synthase" /protein_id="NP_465080.1" /db_xref="GeneID:986929" /translation="MSKKVVLTREASKNKPWQTYFSQNGYEVMSIPLIKTQPIKINLT REQQETDWLFLTSANAVEYFFTNQYERSNYKIAVIGEKTKEKLAEFGHEPSFVPSIYQ SEVFLEEWLNENPEKTSILLPQSNLSRTIIKDTLIEKGYIVFSIELYETIFPEASKKL LTEQLKLNETQIIVFASPSAWKNFYSIAKSFPAQKEKWHIASIGSITTEAILADGWEV KYQPKTFTMKHLADLIIQEELK" misc_feature complement(1591454..1592167) /gene="hemD" /locus_tag="lmo1555" /note="uroporphyrinogen-III synthase; Reviewed; Region: hemD; PRK05928" /db_xref="CDD:235647" misc_feature complement(order(1591631..1591645,1591718..1591720, 1591724..1591726,1591796..1591798,1591925..1591927, 1591994..1592002,1592144..1592146)) /gene="hemD" /locus_tag="lmo1555" /note="active site" /db_xref="CDD:119440" regulatory complement(1591459..1591464) /regulatory_class="ribosome_binding_site" /gene="hemD" /locus_tag="lmo1555" gene complement(1592167..1593096) /gene="hemC" /locus_tag="lmo1556" /db_xref="GeneID:986927" CDS complement(1592167..1593096) /gene="hemC" /locus_tag="lmo1556" /EC_number="2.5.1.61" /experiment="EXISTENCE:[PMID:19448609]" /note="transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis" /codon_start=1 /transl_table=11 /product="porphobilinogen deaminase" /protein_id="NP_465081.1" /db_xref="GeneID:986927" /translation="MKRKIIVGSRRSKLALTQSNWVINKLKENYPEFDFEIKEIVTKG DRILDVTLSKVGGKGLFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRES PLDCFVFNQVNSLDELPQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHA ENFDAIILAKAGLARMGWLENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDML TSIHHEETGICVEAERVFLKKLNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILES EQVGANPSEIGNKVAEDLLSEGADTIIKELRNV" misc_feature complement(1592176..1593096) /gene="hemC" /locus_tag="lmo1556" /note="Porphobilinogen deaminase [Coenzyme transport and metabolism]; Region: HemC; COG0181" /db_xref="CDD:439951" gene complement(1593100..1594407) /gene="hemA" /locus_tag="lmo1557" /db_xref="GeneID:986920" CDS complement(1593100..1594407) /gene="hemA" /locus_tag="lmo1557" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA reductase" /protein_id="NP_465082.1" /db_xref="GeneID:986920" /translation="MFILTMGLNHHTAPIDIREKLVFKETEEEMALVTLQQEKSILEN VIISTCNRTEIVAVVDQIHTGRYYLKRFMANWFQMDMEKIEPYLFFHEETEAVNHLYK VTAGLDSLVLGETQILGQVKHAFEIAKQTETTGTLLNKLFREVVTFAKKVHHHTKINE NAVSVSYAAVEVAKKLYGSLDNKKIVLVGAGEMSELALQNLAGSGIADITIINRTKSN AELLANQFQAKVGAYENMNEHLMLADIVLVSTSATEPIIKQAAMQDLMEQKASSMLVI DIGLPRNVEHDCSYIPNFHLYDIDDLAGVVSANSLERQRIVLELENTIEVEVRNFFEW EKQLGVVPVIRALREKALDMQEVAMTSLENKLPGLTEREYIQIGKHMKSIINQMLKQP ISELKEMSVEEDATTSIEHFKRIFGLSETDVTVIEKEQAETRS" misc_feature complement(1593139..1594407) /gene="hemA" /locus_tag="lmo1557" /note="Glutamyl-tRNA reductase [Coenzyme transport and metabolism]; Region: HemA; COG0373" /db_xref="CDD:440142" regulatory complement(1593106..1593111) /regulatory_class="ribosome_binding_site" /gene="hemA" /locus_tag="lmo1557" regulatory complement(1594416..1594421) /regulatory_class="ribosome_binding_site" regulatory complement(1594505..1594528) /regulatory_class="terminator" gene complement(1594535..1595119) /gene="engB" /locus_tag="lmo1558" /gene_synonym="yihA; ysxC" /db_xref="GeneID:986915" CDS complement(1594535..1595119) /gene="engB" /locus_tag="lmo1558" /gene_synonym="yihA; ysxC" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GTP-binding protein EngB" /protein_id="NP_465083.1" /db_xref="GeneID:986915" /translation="MDVNNVELIISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMI RRKSMARISQKPGKTQTLNFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITS REQLRGVIQIVDLRHKPTEDDRMMYEFLKYYDIPVIVIATKADKIPRSKWQKNAKIVR ETLDFDPDDKFVLFSSETKMGKDEAWQFIKEGME" misc_feature complement(1594547..1595119) /gene="engB" /locus_tag="lmo1558" /gene_synonym="yihA; ysxC" /note="GTP-binding protein EngB required for normal cell division [Cell cycle control, cell division, chromosome partitioning]; Region: EngB; COG0218" /db_xref="CDD:439988" regulatory complement(1595127..1595132) /regulatory_class="ribosome_binding_site" regulatory complement(1595194..1595217) /regulatory_class="terminator" gene complement(1595227..1597149) /gene="thrS" /locus_tag="lmo1559" /db_xref="GeneID:986974" CDS complement(1595227..1597149) /gene="thrS" /locus_tag="lmo1559" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)" /codon_start=1 /transl_table=11 /product="threonyl-tRNA synthetase" /protein_id="NP_465084.1" /db_xref="GeneID:986974" /translation="MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELL DLVTPIHEDGAIEIVTPDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFY YDIDTEAVISDESLVEIEKEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIE AIPEDETVTIYTQGEFFDLCRGVHVPSTGKIQVFKLLSVAGAYWRGDSNNKMLQRIYG TAFFDKNGLKEFIQMQKEAKERDHRKLGKELELFTNSIEVGQGLPLWLPKGATIRRVI ERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNC PHHMMIYKNDIHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQ IKDEFKRVVELILEVYKDFDITDYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMD EMEMDYFEAEGEAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEK HRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQMEIIPVNADAHLDYAKGVQDK LQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETM DLDAFIAQVVAEVSKY" misc_feature complement(1595236..1597149) /gene="thrS" /locus_tag="lmo1559" /note="Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: ThrS; COG0441" /db_xref="CDD:440210" regulatory complement(1597157..1597162) /regulatory_class="ribosome_binding_site" gene 1597218..1597448 /locus_tag="lmos58" /db_xref="GeneID:18245202" misc_RNA 1597218..1597448 /locus_tag="lmos58" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245202" gene complement(1597499..1598422) /gene="dnaI" /locus_tag="lmo1560" /db_xref="GeneID:986905" CDS complement(1597499..1598422) /gene="dnaI" /locus_tag="lmo1560" /experiment="EXISTENCE:[PMID:19448609]" /note="Primosomal protein that may act to load helicase DnaC during DNA replication" /codon_start=1 /transl_table=11 /product="primosomal protein DnaI" /protein_id="NP_465085.1" /db_xref="GeneID:986905" /translation="MDNIERTLGQLFEGRDFEKEYQGLKQQVLHYQPIQDFFKEHKEE VTEQLVNQNLSNLYEFMTQHKKFTEQEETLMPGYAPKLVLNGEFITVTYYPTKEKIEE DKRRAVERRIRSLYMPKQVVDANLADFYTDEESRQLALVEAYQFLNNYPPKSGERVKG LFIHGSFGTGKSYLLGALAKELALKGISTTLVYLPEFMREVKQSISDNTVGEKIQFAK ETEVLMLDDIGAESMTAWTRDEVLGAILQFRMQEELPTFFSSNYNMDQLENHLMFAQN GTEEKLKARRIMERVRYLSKEVNLEGKNRRF" misc_feature complement(1597505..1598422) /gene="dnaI" /locus_tag="lmo1560" /note="primosomal protein DnaI; Reviewed; Region: PRK08939" /db_xref="CDD:236353" regulatory complement(1598431..1598436) /regulatory_class="ribosome_binding_site" gene complement(1598432..1599808) /gene="dnaB" /locus_tag="lmo1561" /db_xref="GeneID:986991" CDS complement(1598432..1599808) /gene="dnaB" /locus_tag="lmo1561" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="chromosome replication initiation / membrane attachment protein DnaB" /protein_id="NP_465086.1" /db_xref="GeneID:986991" /translation="MTEFWMELQAVDSYQVKASGILTGADRKIITMLYQPLMGAECLA LYQTLFTEVEENRLWSEAHSHVQLLNMLDISLKALFEARLKLEGLGLLKSYVKTENDQ RFYIYEILPPLSPEKFFSDGLLNIYLYSKIGNAQFQRLRRFFADEVFETDTYSEITRS FQDVFEPFKGGNSAVTAESGQKLVDKVTPKEIEFDGASFDFNLFLSLLSPGMISREKI TKEVRQTILKLNGIYQVSEKDMPSYLYRALDANGEIDIVYLRKIVREGYTIEHGATPK LQMKQETTVNKEPEETLNDEEALQVYLESITPFQLLVDISDGAVPAETDLRVVEEVMN QQNLPVPVMNVLIEYVLLRLDRKLSKNYMMTIAAHWKRKNVKTAKEAMDLAWQEHEKY KRLQEEPATPKTNNYKRNYQKSTRKEILPDWFDKEQVAPAENKMTDKEKQTLEEQVRE IKERLNKR" misc_feature complement(1598435..1599808) /gene="dnaB" /locus_tag="lmo1561" /note="Replication initiation and membrane attachment protein DnaB [Replication, recombination and repair]; Region: DnaB2; COG3611" /db_xref="CDD:442829" gene complement(1599814..1600278) /gene="nrdR" /locus_tag="lmo1562" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986952" CDS complement(1599814..1600278) /gene="nrdR" /locus_tag="lmo1562" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator NrdR" /protein_id="NP_465087.1" /db_xref="GeneID:986952" /translation="MRCPTCQYNGTRVVDSRPADDGNSIRRRRECEKCGFRFTTFEKV EESPLIVVKKDGAREEFAREKVRRGLIRACEKRPVSAEQIEEIVNEVERELRNIGDSE IASDLIGEKVMNKLANLDEVAYVRFASVYRQFKDISVFVEELKDLMEKNKDR" misc_feature complement(1599820..1600278) /gene="nrdR" /locus_tag="lmo1562" /note="Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains [Transcription]; Region: NrdR; COG1327" /db_xref="CDD:440938" regulatory complement(1599814..1599819) /regulatory_class="ribosome_binding_site" /gene="dnaB" /locus_tag="lmo1561" regulatory complement(1600287..1600292) /regulatory_class="ribosome_binding_site" gene complement(1600356..1600958) /gene="coaE" /locus_tag="lmo1563" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986899" CDS complement(1600356..1600958) /gene="coaE" /locus_tag="lmo1563" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis" /codon_start=1 /transl_table=11 /product="dephospho-CoA kinase" /protein_id="NP_465088.1" /db_xref="GeneID:986899" /translation="MGKTIGLTGSVATGKSTVSSMIQQAGIPLVDADIAARKVVEPGT EGLKEIVAYFGEEILLADGTLNRAKLGKIIFKDKEKREKLNEITHPRVKEYMLEARER FFRAGEELVFFDIPLLFESHLESLVDQIIVVWTTPETELKRLMERNNLTKEEALARIN SQIGIDEKAKKADFVINNNESLEKTQKQVYTFIERFVKNK" misc_feature complement(1600371..1600952) /gene="coaE" /locus_tag="lmo1563" /note="Dephospho-CoA kinase [Coenzyme transport and metabolism]; Region: CoaE; COG0237" /db_xref="CDD:440007" regulatory complement(1600967..1600973) /regulatory_class="ribosome_binding_site" gene complement(1600975..1601796) /gene="mutM" /locus_tag="lmo1564" /db_xref="GeneID:986950" CDS complement(1600975..1601796) /gene="mutM" /locus_tag="lmo1564" /experiment="EXISTENCE:[PMID:19448609]" /note="Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases" /codon_start=1 /transl_table=11 /product="formamidopyrimidine-DNA glycosylase" /protein_id="NP_465089.1" /db_xref="GeneID:986950" /translation="MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVH MLVGQEIEGVRRRGKFLLFDLTNCTILSHLRMEGKFRLMDENEEVSKHTHIIFHFEDH TELRFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKT ALLDQKLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFKATKSIMTEAVALGG STVRTYVNSQGKLGQYQNKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK" misc_feature complement(1600978..1601796) /gene="mutM" /locus_tag="lmo1564" /note="bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase; Region: PRK01103" /db_xref="CDD:234899" regulatory complement(1601803..1601808) /regulatory_class="ribosome_binding_site" gene complement(1601820..1604447) /gene="polA" /locus_tag="lmo1565" /db_xref="GeneID:986949" CDS complement(1601820..1604447) /gene="polA" /locus_tag="lmo1565" /experiment="EXISTENCE:[PMID:19448609]" /note="has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair" /codon_start=1 /transl_table=11 /product="DNA polymerase I" /protein_id="NP_465090.1" /db_xref="GeneID:986949" /translation="MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNV LEKEKPSHVLVAFDAGKTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQY ELANYEADDIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNT PETLKEKYNLTPEQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHA EEISGKKLKEKVLENKELAILSKELATINVDSPIECTVESTKYDGYQTEKVIPLLKEM NFTTLLKNIEGDTPEESKELKELSFEIVTELKEQHFGGKTALYVELENDNYHTANFIG LTVHSSQGTYFFTKETAESSEAFRKWVESDQTKVVYDAKKTIVAMNRIGLAISGITFD IMLASYLLNPSDSIDDFTSVAVRHDYTEVETDEAVYGKGAKRSTPEESIVAAHLARKA VAIADLEKRLVDDLEKNEQLALMEDLELPLTFVLAEMEMQGVSVDTDRLEDMKVELGG RLKTLEASIHSLAGEEFNINSPKQLGVILFEKLELPPVKKTKTGYSTAADVLESLSGK HAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQN IPIRLEEGRKIRQVFVPSKPGWKMFSADYSQVELRVLAHISEDENLIYAFKHDYDIHT KTAMDVFHVEKEEVDSLMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAKDFIDRYFV SYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTAMNTPIQGS AADIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEIAKLEEIVPDVMENAVE LSVPLKVDSAFGDTWYDAK" misc_feature complement(1601823..1604447) /gene="polA" /locus_tag="lmo1565" /note="DNA polymerase I; Provisional; Region: PRK05755" /db_xref="CDD:235591" regulatory complement(1604456..1604461) /regulatory_class="ribosome_binding_site" regulatory complement(1604509..1604542) /regulatory_class="terminator" gene complement(1604613..1605875) /gene="citC" /locus_tag="lmo1566" /db_xref="GeneID:986955" CDS complement(1604613..1605875) /gene="citC" /locus_tag="lmo1566" /EC_number="1.1.1.41" /experiment="EXISTENCE:[PMID:19448609]" /note="Converts isocitrate to alpha ketoglutarate" /codon_start=1 /transl_table=11 /product="isocitrate dehydrogenase" /protein_id="NP_465091.1" /db_xref="GeneID:986955" /translation="MSQKIQVENGVLKTPNNPVIPFIEGDGTGPDIWAAAKRVLDAAV KKAYNGEKEIAWKEVLAGEKAFKQTGEWLPQATLDTIDEYLIAIKGPLTTPIGGGIRS LNVALRQELDLYVCLRPVRYFKGVPSPVKRPEDTDMVIFRENTEDIYAGIEFKEGSIE SKKLIDFLKSEFGVDKIRFPETSGIGIKPISKEGTERLVRSAIEYAIKEGRKSLTLVH KGNIMKFTEGAFKNWGYDLCEREYGDKVFTWNEYDRIKEAEGTEVADAKQNEALAAGK ILVKDSIADIFLQQILTRPAEFDVVATMNLNGDYISDALAAQVGGIGIAPGANINYLT GHAIFEATHGTAPKYAGLDKVNPSSVILSGTLLLEHIGWGEAAALINQSMEKTIAAKT VTYDFARLMDGATEVKCSEFADELIKNF" misc_feature complement(1604616..1605875) /gene="citC" /locus_tag="lmo1566" /note="isocitrate dehydrogenase; Reviewed; Region: PRK07006" /db_xref="CDD:180792" regulatory complement(1605886..1605891) /regulatory_class="ribosome_binding_site" gene complement(1605895..1607016) /gene="citZ" /locus_tag="lmo1567" /db_xref="GeneID:986909" CDS complement(1605895..1607016) /gene="citZ" /locus_tag="lmo1567" /EC_number="2.3.3.5" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of citrate from acetyl-CoA and oxaloacetate" /codon_start=1 /transl_table=11 /product="citrate synthase" /protein_id="NP_465092.1" /db_xref="GeneID:986909" /translation="MTLSKGLENVYVAETSISSIIDDMLTYVGYGIDDLMENNASFEE VIYLLWHLRLPNKDEFKKFKREIQENMAVSETIITSLRMQNHQKLHPMSVLRTTVSML GVFDTEAELDDGEAVYRKGLRLQAKMPTIVAAFSRIRRGLDPIPPREDLNMAANFLYM ITGEEADELSVEAMNKALVLHADHEFNASTFTARVCVATLSDVYSGVTAAIGALKGPL HGGANERVFDMLEEIDQAGDVRNYIQEKIDTKQKIMGFGHRVYRGGDPRAQHLREMSR KLTAEKGEEKWFDISLQVEESVWELKHLKPNVDFYSASVYHALGIDRDLFTLVFSVSR VSGWLAHIFEQYRDNRLIRPRAIYVGPENRSYLPVEERI" misc_feature complement(1605898..1607016) /gene="citZ" /locus_tag="lmo1567" /note="citrate synthase; Provisional; Region: PRK14034" /db_xref="CDD:184467" misc_feature complement(order(1605940..1605969,1606237..1606242, 1606363..1606374,1606378..1606383,1606393..1606395, 1606402..1606404,1606411..1606425,1606429..1606434, 1606441..1606446,1606453..1606455,1606459..1606461, 1606465..1606467,1606717..1606719,1606726..1606731, 1606738..1606740,1606750..1606752,1606777..1606782, 1606789..1606791,1606846..1606848,1606852..1606854, 1606885..1606887,1606930..1606932,1606969..1606989, 1606996..1607004)) /gene="citZ" /locus_tag="lmo1567" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:99863" misc_feature complement(order(1605958..1605960,1605967..1605969, 1606015..1606017,1606027..1606029,1606090..1606092, 1606096..1606098,1606105..1606107,1606111..1606113, 1606216..1606218,1606231..1606233,1606240..1606263, 1606342..1606344,1606351..1606353,1606357..1606365, 1606456..1606458,1606465..1606467,1606993..1606995)) /gene="citZ" /locus_tag="lmo1567" /note="active site" /db_xref="CDD:99863" misc_feature complement(order(1606015..1606017,1606096..1606098, 1606216..1606218,1606240..1606254,1606258..1606263, 1606360..1606365,1606456..1606458,1606465..1606467, 1606993..1606995)) /gene="citZ" /locus_tag="lmo1567" /note="citrylCoA binding site [chemical binding]; other site" /db_xref="CDD:99863" misc_feature complement(order(1605958..1605960,1606015..1606017, 1606027..1606029,1606090..1606092,1606216..1606218, 1606243..1606245,1606357..1606362,1606456..1606458, 1606465..1606467)) /gene="citZ" /locus_tag="lmo1567" /note="oxalacetate/citrate binding site [chemical binding]; other site" /db_xref="CDD:99863" misc_feature complement(order(1605967..1605969,1606090..1606092, 1606096..1606098,1606105..1606107,1606111..1606113, 1606231..1606233,1606240..1606242,1606246..1606263, 1606342..1606344,1606351..1606353,1606360..1606365)) /gene="citZ" /locus_tag="lmo1567" /note="coenzyme A binding site [chemical binding]; other site" /db_xref="CDD:99863" misc_feature complement(order(1606090..1606092,1606243..1606245, 1606360..1606362)) /gene="citZ" /locus_tag="lmo1567" /note="catalytic triad [active]" /db_xref="CDD:99863" regulatory complement(1607024..1607029) /regulatory_class="ribosome_binding_site" gene complement(1607053..1607514) /locus_tag="lmo1568" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986923" CDS complement(1607053..1607514) /locus_tag="lmo1568" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465093.1" /db_xref="GeneID:986923" /translation="MFTESMLFLLLFLLLGLIAKNNSLIIAVAVVILLKLFHVDGKVM EIIQAKGINWGVTIITVAILIPIATGQIGFKDLIDSFKSAAGWIGLGAGIAVSILAKK GVGYMAVDPQVTVSLVFGTILAVVLFRGIAAGPVIAAGIAYMAMQLVAFIK" misc_feature complement(1607059..1607463) /locus_tag="lmo1568" /note="Uncharacterized membrane protein, DUF441 family [Function unknown]; Region: YeaL; COG2707" /db_xref="CDD:442026" regulatory complement(1607520..1607526) /regulatory_class="ribosome_binding_site" gene complement(1607671..1608048) /gene="fxsA" /locus_tag="lmo1569" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986906" CDS complement(1607671..1608048) /gene="fxsA" /locus_tag="lmo1569" /experiment="EXISTENCE:[PMID:19448609]" /note="F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein" /codon_start=1 /transl_table=11 /product="FxsA" /protein_id="NP_465094.1" /db_xref="GeneID:986906" /translation="MRKFILYWALYGLIELIMYVWLFQVIGFWPLLFIQIASSAFGVF IFKRLGGNLFRNLRDGRTVAPYLLDSLCFFIAGFLLIIPGVITTILGLLIFIPFSRKL LKPKLTKWLGNQKKHTQYYYFDM" misc_feature complement(<1607707..1608048) /gene="fxsA" /locus_tag="lmo1569" /note="phage T7 F exclusion suppressor FxsA; Reviewed; Region: fxsA; PRK11463" /db_xref="CDD:236913" regulatory complement(1608056..1608061) /regulatory_class="ribosome_binding_site" regulatory complement(1608129..1608148) /regulatory_class="terminator" gene complement(1608166..1609923) /gene="pykA" /locus_tag="lmo1570" /db_xref="GeneID:986914" CDS complement(1608166..1609923) /gene="pykA" /locus_tag="lmo1570" /EC_number="2.7.1.40" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of phosphoenolpyruvate from pyruvate" /codon_start=1 /transl_table=11 /product="pyruvate kinase" /protein_id="NP_465095.1" /db_xref="GeneID:986914" /translation="MKKTKIVCTIGPASESVDTLVQLIEAGMNVARLNFSHGDFEEHG ARIVNIREASKKTGKQVAILLDTKGPEIRTNDMVGGKLEFQTGDVVRVSMTPVEGTKE KFSVTYGELYDDVEIGSSILLDDGLIGLEVIEKDEANRELVTKVLNPGVLKNKKGVNV PNVSINLPGITEKDAADIRFGLEQGIDFIAASFVRRATDVLEITKILEEHNATHVQII PKIENQEGVDNIDEILQVSQGLMVARGDLGVEIPAEEVPIVQKELIRKCNKLGKPVIT ATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGDYPVEAVKMMAKIAVR TEEVLVAQDKFALKLHENTDMTEAIGQAVGHTAKNLNVQTIVAATQSGHTARMISKYR PKSHIVAVTFNEHVYRGLALSWGVYPRLATPVSNTDEMFDLAVKESLASGVAKQGDLI IITAGVPVTESGTTNVMKIQLIGEKVVKGQGIGSKSVIGKAIVAKSNAEALEKAEEGG ILIVKTTDKEILPAFEKSAAVVVEEGGLTSHAAVVGINLGIPVIVGAKDATSLVKDGE IITVDSRQGVVYNGKTATH" misc_feature complement(1608169..1609923) /gene="pykA" /locus_tag="lmo1570" /note="pyruvate kinase; Provisional; Region: PRK06354" /db_xref="CDD:235784" regulatory complement(1609933..1609938) /regulatory_class="ribosome_binding_site" regulatory complement(1610165..1610190) /regulatory_class="terminator" gene complement(1610206..1611165) /gene="pfkA" /locus_tag="lmo1571" /db_xref="GeneID:986951" CDS complement(1610206..1611165) /gene="pfkA" /locus_tag="lmo1571" /EC_number="2.7.1.11" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis" /codon_start=1 /transl_table=11 /product="6-phosphofructokinase" /protein_id="NP_465096.1" /db_xref="GeneID:986951" /translation="MKRIAILTSGGDAPGMNAATRAVVRKAIYEGLEVYGINYGFLGL VNGDIRKLELGSVGDLLHRGGTFLYSARYPEFATEEGQLKGIEQLKKHQIDGLVVIGG DGSYHGAEALTKRGFPTIGIPGTIDNDISGTDFTIGFDTALNTVLDALDKIRDTATSH ERTFIIEVMGRDAGDIALWSGLAGGAEAIIVPEESFNMDDVVDRLNKGRERGKKHSII VVAEGVMSGNEFAKQLAEYGDYHARVTVLGHVQRGGSPTAFDRVLASRLGARSVELLL ENRGGLAVGIRENRIVENDISEILKEKHTLDQKLFDLASILSI" misc_feature complement(1610209..1611165) /gene="pfkA" /locus_tag="lmo1571" /note="ATP-dependent 6-phosphofructokinase; Region: PRK03202" /db_xref="CDD:235111" misc_feature complement(order(1610410..1610412,1610419..1610421, 1610500..1610502,1610653..1610661,1610779..1610781, 1610785..1610787,1610791..1610793,1610842..1610847, 1610851..1610859,1610950..1610952,1611043..1611045, 1611133..1611135)) /gene="pfkA" /locus_tag="lmo1571" /note="active site" /db_xref="CDD:238388" misc_feature complement(order(1610842..1610847,1610851..1610859, 1610950..1610952,1611043..1611045,1611133..1611135)) /gene="pfkA" /locus_tag="lmo1571" /note="ADP/pyrophosphate binding site [chemical binding]; other site" /db_xref="CDD:238388" misc_feature complement(order(1610212..1610220,1610302..1610304, 1610347..1610349,1610368..1610370,1610380..1610385, 1610527..1610529,1610611..1610613,1610617..1610622, 1610704..1610706,1610713..1610715,1610725..1610727, 1610761..1610763,1610980..1610982,1610989..1610991, 1611004..1611006,1611091..1611093,1611103..1611105)) /gene="pfkA" /locus_tag="lmo1571" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:238388" misc_feature complement(order(1610521..1610529,1610533..1610535, 1610605..1610607,1610611..1610613,1610704..1610706, 1610989..1610994,1611001..1611006,1611091..1611093, 1611103..1611105)) /gene="pfkA" /locus_tag="lmo1571" /note="allosteric effector site [active]" /db_xref="CDD:238388" misc_feature complement(order(1610410..1610412,1610419..1610421, 1610437..1610439,1610500..1610502,1610653..1610661, 1610680..1610682,1610779..1610781,1610785..1610787, 1610791..1610793)) /gene="pfkA" /locus_tag="lmo1571" /note="fructose-1,6-bisphosphate binding site; other site" /db_xref="CDD:238388" regulatory complement(1611403..1611442) /regulatory_class="terminator" gene complement(1611449..1612405) /gene="accA" /locus_tag="lmo1572" /db_xref="GeneID:986992" CDS complement(1611449..1612405) /gene="accA" /locus_tag="lmo1572" /EC_number="6.4.1.2" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase carboxyltransferase subunit alpha" /protein_id="NP_465097.1" /db_xref="GeneID:986992" /translation="MANEMEFEKPILELKSKIADLKEYNETSDVDLTNEIEKLEKRLA KLESSIYSNMTAWDKFQVARHPERPTTLDYISLLFEDFMELHGDRTFGDDAAIVGGIA TFKGIPVTVIGHQRGKDTKDNLHRNFGMPHPEGFRKALRLMKQADKFGRPIICFIDTK GAYPGRAAEERGQSEAIARNLYEMSDMKVPIISIVIGEGGSGGALALGVGNQIFMLEN AVFSVISPEGAAAILWKDASLAKKAAESMRITAGDLFELGITDGIIPEVKGGAHRDLT AQAEEINKTITKSLHALMAFSEEQLIKQRYEKFKKIGVYETI" misc_feature complement(1611458..1612399) /gene="accA" /locus_tag="lmo1572" /note="Acetyl-CoA carboxylase alpha subunit [Lipid transport and metabolism]; Region: AccA; COG0825" /db_xref="CDD:440587" gene complement(1612395..1613279) /gene="accD" /locus_tag="lmo1573" /db_xref="GeneID:986998" CDS complement(1612395..1613279) /gene="accD" /locus_tag="lmo1573" /EC_number="6.4.1.2" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase subunit beta" /protein_id="NP_465098.1" /db_xref="GeneID:986998" /translation="MLGDLFTKPKKRKYATIPSDGTKADVPEGIMTKCPECKKIMYTK ELQKNLMVCNYCGFHHPIGAKARIDMLVDEGSFEEIDASLTTANPLGFEDYMDRIEKD KQKSGLNEAIVTGHATIGGNPLVIAVMDSRFRMASMGSVVGEKILRAVEDADKTNKPF VIFTASGGARMQEGMLSLMQMAKTSAAFKRFSNHGGLIITVMTHPTTGGVSASFASLG DYNFAEPGALIGFAGRRVIEQTVREELPEDFQTAEFLLKHGQLDDCISRLDLQNKLSF ILSIHVKAPGVGGEVDGE" misc_feature complement(1612431..1613249) /gene="accD" /locus_tag="lmo1573" /note="Acetyl-CoA carboxylase beta subunit [Lipid transport and metabolism]; Region: AccD; COG0777" /db_xref="CDD:440540" regulatory complement(1613287..1613292) /regulatory_class="ribosome_binding_site" gene complement(1613497..1616823) /gene="dnaE" /locus_tag="lmo1574" /db_xref="GeneID:986993" CDS complement(1613497..1616823) /gene="dnaE" /locus_tag="lmo1574" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit alpha" /protein_id="NP_465099.1" /db_xref="GeneID:986993" /translation="MGFVHLQVASAYDLLSSTASIDKLIAKAKEYHYPALAITDKNVL YGVVEFYQKCLAADIKPIIGMTVTIQGYLNPINSYELILIAESTAGYHQLLKIASAIQ TREEGPELPQSWLRAYSSDLIVISPGAKGEIERLLMEEDREGALEVYANLVEIFGKES VYLSAQKENPRLFAKIETFSSEENVPVVATKNVQYLEPKDAQAKEVLTAIRDNRTVDW TTLPLAGPNYFTSQDEMERDWQTAFEKQACLETGELANRCHVEIALDQHLLPRFPLNE GQNASDVLRQTAFAGLKERNLLGMEYQERLEYELKVITEMGFADYFLIVWDVIRYSRE AGVLTGPGRGSAAGSLVSYALRITDVDPIRYNLLFERFLNPERITMPDIDLDFPDNRR DEVISYVVSKYGEAHVAQIGTFGTLAAKAAIRDTARSFGLNSVLLSEWSKLIPSQLGI TLQKALQESPRLENHIKSSKENEMIWEVACQLEGLPRHISTHAAGIVISDKPLVEQVA LQLGSGDARLTQFAMGELEKIGLLKMDFLGLRNLSLLDRVLKSVNYTRETPLTLADIS LEDKKTLKLFQTGDTTGVFQFESDGIRRVLRKLKPTSFEDVVAVDALYRPGPMEQIDT FIARKHGKEKIQYPHPDLASILEVTYGVIVYQEQIIQVANQMAGFSLGEADLLRRAVS KKKADVLNEERIHFVEGAKSKGYSEASANQVYDMIVQFANYGFNRSHAAAYSKIAFQL AYLKAHFPAAFMSSLLSSVFGNDDKISQYITEAKNYGISMLAPSINHSNYYFQMENET SIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFCERMPHKMLSETVLEALVFSGCF DEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDEFLKKMKPRYRKTAPISIDE KLEKEKLYTGQYVSAHPVSYYQNKLQNLAITRLANLSSGKNYQVAAYVHEVKSIRTKK GETMCFLTISDDSKELSAVMFPECYRKFANFAQKGEILFLQVKADTRNGELQLIINKA EDLKEIKAPVRLFLKLTEPQQMEQIKPILARYKGDSKVIVHQAITKQTAELKNIQVTP SNELQEALGELLGKENVVIK" misc_feature complement(1613731..1616820) /gene="dnaE" /locus_tag="lmo1574" /note="DNA polymerase III, alpha subunit [Replication, recombination and repair]; Region: DnaE; COG0587" /db_xref="CDD:440352" regulatory complement(1616831..1616836) /regulatory_class="ribosome_binding_site" gene complement(1616945..1617880) /locus_tag="lmo1575" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986973" CDS complement(1616945..1617880) /locus_tag="lmo1575" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465100.1" /db_xref="GeneID:986973" /translation="MKNEILQQIKQYETIILHRHVRPDPDAYGSQMGLAEIIRASFPE KKVYSVGNDEKSLQFLGIVDEITDETYKDALVIVCDTANQERISDGRFNLGKALIKID HHPNDDAYGDLLWVDTTASSCSEMIVAFWEMFSDELILNETAARLLYAGIVGDTGRFL YPSTTEETLRLSAHLVTFPFDRPALYRELYELPKNTVKLSGYILQNFVMDENGAATVY LSDTLLNEFEVDPRDASALVSCIENVAGIKAWIMFIQEGPVFRARLRSKGPVINELAK EYGGGGHPLASGATLHNEEEIKEMTAKLQLICAAK" misc_feature complement(1616981..1617874) /locus_tag="lmo1575" /note="nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs [Nucleotide transport and metabolism, Signal transduction mechanisms]; Region: NrnA; COG0618" /db_xref="CDD:440383" regulatory complement(1617890..1617895) /regulatory_class="ribosome_binding_site" gene complement(1617901..1619214) /locus_tag="lmo1576" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986987" CDS complement(1617901..1619214) /locus_tag="lmo1576" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465101.1" /db_xref="GeneID:986987" /translation="MATKHEQILKYIENLAVGEKISVRKIAKNLSVSEGTAYRAIKDA EIIGFVSTIKRVGTLRIERKQKDSIEKLTFAEIVNMIDGQVLGGRAGLYKSLNKFVIG AMTVEAMERYTDAGNLLIVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELP ILSTSYDTFTVATMINRAIYDQLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEE ATGHSRFPVVNRAMRLTGMVTSKDILEKNPSISIERVMTKNPLTVGPKMSVASVAHMM IWESIEVIPVVKDDLTLIGIVSRQDILKSMQMIQKQPQVGETIDDTIANQLSEKTDTG EEADYEFKVSPQMTNSLGTLSYGVFTQVVCEVVQQKLFSMKKRNVAIENVTMYFLKPV QMDATIIIKPRILEMGRKAGKLDVELYLEGILTGKAIVACQMMER" misc_feature complement(1618681..1618989) /locus_tag="lmo1576" /note="DRTGG domain; Region: DRTGG; pfam07085" /db_xref="CDD:429285" misc_feature complement(1618300..1618623) /locus_tag="lmo1576" /note="Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the DRTGG domain; Region: CBS_pair_DRTGG_assoc; cd04596" /db_xref="CDD:341371" misc_feature complement(order(1618303..1618305,1618312..1618317, 1618321..1618323,1618327..1618329,1618366..1618368, 1618537..1618545,1618609..1618617,1618621..1618623)) /locus_tag="lmo1576" /note="putative ligand binding site II [chemical binding]; other site" /db_xref="CDD:341371" misc_feature complement(1618447..1618623) /locus_tag="lmo1576" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341371" misc_feature complement(order(1618315..1618317,1618360..1618368, 1618432..1618434,1618480..1618482,1618489..1618494, 1618504..1618506,1618543..1618545)) /locus_tag="lmo1576" /note="putative ligand binding site I [chemical binding]; other site" /db_xref="CDD:341371" misc_feature complement(1618303..1618434) /locus_tag="lmo1576" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341371" misc_feature complement(1617958..1618200) /locus_tag="lmo1576" /note="The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated...; Region: hot_dog; cd03440" /db_xref="CDD:239524" misc_feature complement(order(1618042..1618053,1618147..1618152)) /locus_tag="lmo1576" /note="active site 2 [active]" /db_xref="CDD:239524" misc_feature complement(order(1618069..1618077,1618111..1618113, 1618120..1618125,1618132..1618134)) /locus_tag="lmo1576" /note="active site 1 [active]" /db_xref="CDD:239524" regulatory complement(1619223..1619230) /regulatory_class="ribosome_binding_site" gene complement(1619240..1619926) /locus_tag="lmo1577" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986999" CDS complement(1619240..1619926) /locus_tag="lmo1577" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins" /codon_start=1 /transl_table=11 /product="metal-dependent hydrolase" /protein_id="NP_465102.1" /db_xref="GeneID:986999" /translation="MKISFHGQSCIKIITGDTTILVDPFISGNEKCDLKAEEQMPDFI VLSHGHDDHVGDTVEIAKNSGATVICNADLASFLAVEDGLENMAPMHIGGKRQFSFGQ VKLTQAFHGSQTVRDGRIVNLGFPTGIVFTIEDKNIYFAGDTGLFSDMKLIGELNPLD VAFLPIGDNFTMGPEDAAIAARFLQAKLVVPMHYNTFPLIAQDPHKFVASLNEGIAGK VLEIGEGIEI" misc_feature complement(1619243..1619926) /locus_tag="lmo1577" /note="metal-dependent hydrolase; Provisional; Region: PRK00685" /db_xref="CDD:234811" misc_feature complement(order(1619498..1619500,1619558..1619563, 1619768..1619773,1619777..1619779,1619783..1619785)) /locus_tag="lmo1577" /note="active site" /db_xref="CDD:293792" regulatory complement(1619936..1619941) /regulatory_class="ribosome_binding_site" regulatory 1620078..1620083 /regulatory_class="ribosome_binding_site" gene 1620091..1621188 /locus_tag="lmo1578" /db_xref="GeneID:986985" CDS 1620091..1621188 /locus_tag="lmo1578" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="X-Pro dipeptidase" /protein_id="NP_465103.1" /db_xref="GeneID:986985" /translation="MEKNIDVLQNWLKDQGAEVGFLTDPENIAYFSGYHSEPHERVLG LAVFSDSEPFLFTPALEVEDVRGGDWTHPAYGYNDTENPFTIIADEIKKRVANPSKFA IEKKHMSVDRYEQLGGLFSGSSFIPIEHKIEQIRLIKTEAELKILKEAALLADYAVQV GVDEIAEGKTEAEIVAKIEYEMKKKGVTAMSFDTMVLTGKNGALPHGTPGETKIKKGD LVLFDLGVVHKGYCSDITRTVAFGDISDEQKKIYDTVLEAQIAAVEKVKAGVKASEID LTARNIIREAGFGDYFPHRLGHGLGASVHEFPSITETNSMELQENMVFTIEPGIYVPG VAGVRIEDDLVVTKDGVQVLTEFPKTLQVIE" misc_feature 1620112..1621182 /locus_tag="lmo1578" /note="Xaa-Pro aminopeptidase [Amino acid transport and metabolism]; Region: PepP; COG0006" /db_xref="CDD:439777" regulatory 1621197..1621222 /regulatory_class="terminator" regulatory complement(1621197..1621222) /regulatory_class="terminator" gene complement(1621230..1622342) /locus_tag="lmo1579" /db_xref="GeneID:986945" CDS complement(1621230..1622342) /locus_tag="lmo1579" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alanine dehydrogenase" /protein_id="NP_465104.1" /db_xref="GeneID:986945" /translation="MLVGVPKEIKNNENRVAMTPASVFSYVNAGHTVYVEKDAGIGSN YQDADFVQAGAKIVETAKEAWDVDMVVKVKEPIASEYTYFKEGLLLFTYLHLANEPTL AKALMESKVNSVAYETVELADHTLPLLSPMSEVAGRMAAQIGAQFLQRTNGGMGVLLG GVPGVERSEVVIIGGGIAGTNAAKIAAGLGANVTILDMNLKRLRELDDIFGNQVQTLM SNDFNIETAVKKADLVIGAVLIPGAKAPKLVKEHVVKQMIPGSVLVDIAIDQGGIFET TDHVSTHDNPTYEKYGVLHYAVANMPGAVPRTSTLALTNATLPFGLKLANQGLEAAVQ NDPFLLRGLNTYQGHITYKAVADSLDLPYTDSKELI" misc_feature complement(1621233..1622342) /locus_tag="lmo1579" /note="Alanine dehydrogenase (includes sporulation protein SpoVN) [Amino acid transport and metabolism]; Region: Ald; COG0686" /db_xref="CDD:440450" regulatory complement(1622352..1622357) /regulatory_class="ribosome_binding_site" regulatory 1622570..1622575 /regulatory_class="ribosome_binding_site" gene 1622583..1623047 /locus_tag="lmo1580" /db_xref="GeneID:986961" CDS 1622583..1623047 /locus_tag="lmo1580" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465105.1" /db_xref="GeneID:986961" /translation="MLQQYERVLVAVDGSKEAERAFQKAIQVANRNDAALGLVHVIDT RAFSSVANYDTSMADKATEYADELLSGYKEDALKAGVTKVESYIEYGSPKTAITKEAA KAFQADLIMCGATGLNAVERLLIGSVSEYIIRHSPCDVLVVRNEVPDYKDEK" misc_feature 1622601..1623011 /locus_tag="lmo1580" /note="universal stress protein (USP) and similar proteins; Region: USP-like; cd00293" /db_xref="CDD:467483" regulatory 1623060..1623085 /regulatory_class="terminator" regulatory complement(1623060..1623085) /regulatory_class="terminator" gene complement(1623099..1624292) /gene="ackA" /locus_tag="lmo1581" /db_xref="GeneID:986937" CDS complement(1623099..1624292) /gene="ackA" /locus_tag="lmo1581" /EC_number="2.7.2.1" /experiment="EXISTENCE:[PMID:19448609]" /note="AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA" /codon_start=1 /transl_table=11 /product="acetate kinase" /protein_id="NP_465106.1" /db_xref="GeneID:986937" /translation="MEKTIAINAGSSSLKFQLYDMPSERVITAGIVERIGLKDSIFTI TVDGEKIKEIIDIPDHEIAVQMLLEKLINHKVIGSYDEITGIGHRVVHGGERFPESVY IDDQVIKDIEALSELAPLHNPANVTGIKAFRKILPDVVSVAVFDTAFHQTMPPASYLY SLPYSYYEDYGIRKYGFHGTSHKYVSERAAELLGRPVEELRLLTCHLGNGASIAAIEG GKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVLDVLNKESGMLGVS GISSDLRDLEDEAAKGNDRAELALQVFVDRIHKYIGSYAARMNGVDAIIFTAGIGENS SYIREKVLRGLEFMGVYWDPALNQVRGEERFLNYPHSPVKVIIIPTNEELMIARDVET IKNNR" misc_feature complement(1623102..1624286) /gene="ackA" /locus_tag="lmo1581" /note="acetate kinase A/propionate kinase 2; Reviewed; Region: PRK00180" /db_xref="CDD:234680" regulatory complement(1624306..1624311) /regulatory_class="ribosome_binding_site" gene complement(1624316..1625314) /locus_tag="lmo1582" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986947" CDS complement(1624316..1625314) /locus_tag="lmo1582" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465107.1" /db_xref="GeneID:986947" /translation="MANEATQELFQVLDNTAIILQNELEISYLEAVYETGENLFQKEV LQKEELSSEKQLKLQESYESIELENFSNEEIRKGLQLALLKGMKHGIQVNHQMTPDSI GFIVAYLLEKVIQKKKNISILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLI SLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDLPVGYYPDDENAKTFELCREEG HSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPET LFKSEQARKSILILRKADVNVKPPKEVLLANLSSLTDPSVTAPILAEIENWFKSKQ" misc_feature complement(1624325..1625314) /locus_tag="lmo1582" /note="Adenine-specific DNA N6-methylase [Replication, recombination and repair]; Region: YtxK; COG0827" /db_xref="CDD:440589" regulatory complement(1625323..1625328) /regulatory_class="ribosome_binding_site" regulatory complement(1625474..1625495) /regulatory_class="terminator" gene complement(1625505..1626002) /gene="tpx" /locus_tag="lmo1583" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987763" CDS complement(1625505..1626002) /gene="tpx" /locus_tag="lmo1583" /experiment="EXISTENCE:[PMID:19448609]" /note="antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein" /codon_start=1 /transl_table=11 /product="thiol peroxidase" /protein_id="NP_465108.1" /db_xref="GeneID:987763" /translation="MTQVTFKHNPVTLVGTERKVGDKAPNFTVVNRDLEEVTLHDYDG KVRLISVVPSIDTSVCSTQTRKFNEEASNLDNTVVLTISVDLPFAQKKWCAAEGLPNA ITLSDHRDLSFGEAYGVIMKELRLLARSVFVVNAVGEIVYTEVVPEGSDHPNYEAAIE AAKKA" misc_feature complement(1625538..1626002) /gene="tpx" /locus_tag="lmo1583" /note="Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]; Region: Tpx; COG2077" /db_xref="CDD:441680" regulatory complement(1626012..1626017) /regulatory_class="ribosome_binding_site" gene complement(1626064..1626600) /locus_tag="lmo1584" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986942" CDS complement(1626064..1626600) /locus_tag="lmo1584" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465109.1" /db_xref="GeneID:986942" /translation="MANENVTFESKRQVYHYEPSIPKEEAIPKQYFAGFWIRFLAYLV DLVAIAALKGIIVNPIFRVSGMGMDDGFFTFYWSITTIIFLAYFILLTRFFGQTLGKM LFGLRVVKLDGEKLTWLTVLFREGAMRFVLKTIWPLYVVCAFTPNKQGIADFFESTSV VHMGYLELDEKWANGAKK" misc_feature complement(1626115..1626531) /locus_tag="lmo1584" /note="Uncharacterized membrane protein YckC, RDD family [Function unknown]; Region: YckC; COG1714" /db_xref="CDD:441320" regulatory complement(1626608..1626613) /regulatory_class="ribosome_binding_site" gene complement(1626620..1627633) /locus_tag="lmo1585" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987795" CDS complement(1626620..1627633) /locus_tag="lmo1585" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidase" /protein_id="NP_465110.1" /db_xref="GeneID:987795" /translation="MNAKRWIALGIVFALLIVSALAKFTSSQIASKEESSPTFVESLF ADTGELTETVIEEGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRND DNIQGVLLYVNSPGGGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPAD KIFASKETLTGSLGVIMQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKI MQSMIDDSYNEFVKVVAQGRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALE ALKKEQGLAGATVIQYDAPGDFSSLFSVAAQKISGQNADISQLIKLTGTLKAPRMMYL YGE" misc_feature complement(1626797..1627450) /locus_tag="lmo1585" /note="Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad; Region: S49_Sppa_N_C; cd07023" /db_xref="CDD:132934" misc_feature complement(order(1626860..1626862,1626869..1626871, 1626875..1626883,1626953..1626955,1627100..1627111, 1627133..1627135,1627139..1627141,1627184..1627186, 1627301..1627303,1627427..1627429)) /locus_tag="lmo1585" /note="tandem repeat interface [polypeptide binding]; other site" /db_xref="CDD:132934" misc_feature complement(order(1626947..1626949,1626959..1626961, 1627046..1627060,1627064..1627066,1627265..1627267, 1627343..1627345,1627364..1627366)) /locus_tag="lmo1585" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:132934" misc_feature complement(1627184..1627186) /locus_tag="lmo1585" /note="active site residues [active]" /db_xref="CDD:132934" regulatory complement(1627641..1627646) /regulatory_class="ribosome_binding_site" regulatory 1627796..1627801 /regulatory_class="ribosome_binding_site" gene 1627812..1628615 /gene="ppnK" /locus_tag="lmo1586" /db_xref="GeneID:987765" CDS 1627812..1628615 /gene="ppnK" /locus_tag="lmo1586" /EC_number="2.7.1.23" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the phosphorylation of NAD to NADP" /codon_start=1 /transl_table=11 /product="inorganic polyphosphate/ATP-NAD kinase" /protein_id="NP_465111.1" /db_xref="GeneID:987765" /translation="MAKTIFYFSYRKTEELHAKAKELKKITTDYGYELTDDYQKANVI ISIGGDGAFLKSVRETGFRQDCLYAGIALTEQLGQYCDFHINQLDEIIKAAIEDRWLV RRYPTIYGTVNNTKAFYVLNEFNIRSSIIRTLTMDLYINDSHFETFRGDGMVISTPTG STAYNKSVNGSIVDPLLPSMQVSELASINNNKFRTLGSSFILSPKRKLRIEIASEEGN NEFPMIGMDSEALSIQHVHEVNLEVGDRFINIIKLPKNSFWDKVKRNFL" misc_feature 1627812..1628612 /gene="ppnK" /locus_tag="lmo1586" /note="NAD kinase; Region: ppnK; PRK03501" /db_xref="CDD:179584" regulatory 1628622..1628641 /regulatory_class="terminator" regulatory complement(1628622..1628641) /regulatory_class="terminator" gene complement(1628647..1629597) /gene="argF" /locus_tag="lmo1587" /db_xref="GeneID:987773" CDS complement(1628647..1629597) /gene="argF" /locus_tag="lmo1587" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation" /codon_start=1 /transl_table=11 /product="ornithine carbamoyltransferase" /protein_id="NP_465112.1" /db_xref="GeneID:987773" /translation="MTMYAKNNTSGKDMLSLLEWNKEELTDIIKLAVAMKTNPAHYSH ILSGKILGMIFDKPSTRTRVSFEAGILQLGGQAIVMSSKELQIGRGEPIKDTAHVMSE YIDAIMIRTFSHEKVEELAYHAEIPIINGLTDLHHPCQALADLMTIYEWKDQLEGIKL AYIGDGNNVCHSLLLAGAMVGIDIRLAMPKGYEVDETILAKAENLAKQSGGKIFVTED SKLAVTDADFIYTDVWTSMGQEDENAKRLADFGEKYQVNAELVSGAKPDYHFLHCLPA HREEEVTTEIIDGIHSVIYQQAGNRLHAQKALLAAILEAK" misc_feature complement(1628659..1629576) /gene="argF" /locus_tag="lmo1587" /note="ornithine carbamoyltransferase; Provisional; Region: PRK00779" /db_xref="CDD:234835" gene complement(1629594..1630754) /gene="argD" /locus_tag="lmo1588" /db_xref="GeneID:984620" CDS complement(1629594..1630754) /gene="argD" /locus_tag="lmo1588" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acetylornithine aminotransferase" /protein_id="NP_465113.1" /db_xref="GeneID:984620" /translation="MKHVFPTYKRFPIDLVNGTGTVVTDKNGKTYLDFTSGIAVCNLG HCPTNVAEAVQQQLGNIWHTSNLYECALQDSVAELIADGKERLVFFCNSGTESNEAAL KLARKYTGKEKIITFEKSFHGRTFGSMSATGQAKIHQGFGELVPGFTYVPYNDIEAFR AEIDENTAAVMLEVIQAEGGVIPANAAFLLEVQLLCKKMGALLIIDEVQTGLGRTGTL YGFEQIGLDPDIFTLAKGLGNGLPIGAMVGKSDLISAFGPGSHGSTFGGNKLALAAAK EILLTMKQTGFLEEVNAKADYFRNLLEANLEVLDNVSDIRGGGFLIGIELENAAEPVI TELRDKGLLILTAGTNVLRILPPLTVSYAEIDQAIYLLKSVLENQLIGSEEG" misc_feature complement(1629627..1630754) /gene="argD" /locus_tag="lmo1588" /note="acetylornithine transaminase; Region: argD; PRK02936" /db_xref="CDD:179505" misc_feature complement(order(1630050..1630052,1630128..1630133, 1630137..1630139,1630236..1630238,1630383..1630385, 1630389..1630394,1630470..1630478)) /gene="argD" /locus_tag="lmo1588" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99735" misc_feature complement(order(1630050..1630052,1630128..1630130, 1630137..1630139,1630236..1630238,1630389..1630394, 1630470..1630475)) /gene="argD" /locus_tag="lmo1588" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature complement(1630050..1630052) /gene="argD" /locus_tag="lmo1588" /note="catalytic residue [active]" /db_xref="CDD:99735" regulatory complement(1629606..1629612) /regulatory_class="ribosome_binding_site" /gene="argD" /locus_tag="lmo1588" gene complement(1630751..1631503) /gene="argB" /locus_tag="lmo1589" /db_xref="GeneID:987804" CDS complement(1630751..1631503) /gene="argB" /locus_tag="lmo1589" /EC_number="2.7.2.8" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate" /codon_start=1 /transl_table=11 /product="acetylglutamate kinase" /protein_id="NP_465114.1" /db_xref="GeneID:987804" /translation="MENTIVIKLGGVASDNLTEGFFRQITEWQAANKKIVLVHGGGHY ITKMMEALAIPVETKNGLRVTNKATLEVTKMVLIGQVQPAITTAFQKRNISVIGLNAS DTGLLEADRLSDTDLGLVGKITKVKTNLIEQLLSENIITVIAPLGINSEHDWLNVNAD TAACEVASALHAEALYLLTDVPGVKNGSEIIGEIATAEIEKLQSTGVIKGGMIPKLAS AAFAAENGVGQVIITDSLNNSGTKIKNKVAIG" misc_feature complement(1630802..1631503) /gene="argB" /locus_tag="lmo1589" /note="acetylglutamate kinase; Provisional; Region: PRK00942" /db_xref="CDD:234869" misc_feature complement(order(1630859..1630861,1630877..1630879, 1630883..1630885,1630967..1630969,1631378..1631383, 1631471..1631476,1631480..1631482)) /gene="argB" /locus_tag="lmo1589" /note="nucleotide binding site [chemical binding]; other site" /db_xref="CDD:239771" misc_feature complement(order(1631027..1631029,1631033..1631038, 1631315..1631317,1631378..1631383)) /gene="argB" /locus_tag="lmo1589" /note="N-acetyl-L-glutamate binding site [chemical binding]; other site" /db_xref="CDD:239771" regulatory complement(1630762..1630767) /regulatory_class="ribosome_binding_site" /gene="argB" /locus_tag="lmo1589" regulatory complement(1631511..1631516) /regulatory_class="ribosome_binding_site" gene complement(1631516..1632712) /gene="argJ" /locus_tag="lmo1590" /db_xref="GeneID:984450" CDS complement(1631516..1632712) /gene="argJ" /locus_tag="lmo1590" /EC_number="2.3.1.1" /EC_number="2.3.1.35" /experiment="EXISTENCE:[PMID:19448609]" /note="bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate" /codon_start=1 /transl_table=11 /product="bifunctional ornithine acetyltransferase/N-acetylglutamate synthase" /protein_id="NP_465115.1" /db_xref="GeneID:984450" /translation="MELIKGNIASPKGFYADGKHAGLKRKRNDIGWIYSEVPANAAAV YTMNQMQAAPIFVTKDSFQSNAKLQAIIVNSGNANACTGNQGMLDALAMRAQTAEKLE IPLDSVAVASTGIIGDMLPMDKINAGIEMLEKQTGNAADFEEAILTTDTFQKQISFQT EIGGRKVTMSGVAKGSGMIHPNMATMLAFITTDAAIPAELLQKLLKIKVDKTFNQITV DGDTSTNDMVVVMANGCAENPMLQEGTADFAKFADMFQAVTEHLAKSIARDGEGATKL IEVQVNGATKTEDARMIAKKIVSSSLVKTAAFGGDGNWGRIICAIGYSGGRFAPDNIT IKIGGIEILNHSSQTIYNQQALDAYLEEEHIIIEVDLHIGLESGTAWGCDLSYEYVKI NACYRT" misc_feature complement(1631519..1632682) /gene="argJ" /locus_tag="lmo1590" /note="Ornithine acetyltransferase (OAT) family; also referred to as ArgJ. OAT catalyzes the first and fifth steps in arginine biosynthesis, coupling acetylation of glutamate with deacetylation of N-acetylornithine, which allows recycling of the acetyl group in...; Region: OAT; cd02152" /db_xref="CDD:239065" misc_feature complement(order(1631552..1631560,1631684..1631686, 1631738..1631749,1631756..1631761,1631765..1631776, 1631780..1631782,1631786..1631791,1631795..1631800, 1631807..1631815,1632047..1632058,1632167..1632169, 1632179..1632181,1632362..1632367,1632470..1632472, 1632560..1632574)) /gene="argJ" /locus_tag="lmo1590" /note="heterotetramer interface [polypeptide binding]; other site" /db_xref="CDD:239065" misc_feature complement(order(1631519..1631524,1631534..1631536, 1632158..1632160,1632182..1632184,1632191..1632193, 1632266..1632271,1632371..1632376)) /gene="argJ" /locus_tag="lmo1590" /note="active site pocket [active]" /db_xref="CDD:239065" misc_feature complement(1632158..1632163) /gene="argJ" /locus_tag="lmo1590" /note="cleavage site [active]" /db_xref="CDD:239065" regulatory complement(1632722..1632727) /regulatory_class="ribosome_binding_site" gene complement(1632728..1633759) /gene="argC" /locus_tag="lmo1591" /db_xref="GeneID:984694" CDS complement(1632728..1633759) /gene="argC" /locus_tag="lmo1591" /EC_number="1.2.1.38" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate" /codon_start=1 /transl_table=11 /product="N-acetyl-gamma-glutamyl-phosphate reductase" /protein_id="NP_465116.1" /db_xref="GeneID:984694" /translation="MKVSIIGATGYGGLELIRLLHQHSSVDIATLHSFSAQAETLATF YPHLKDLAVSPLEKINPTEIIEKSDTVFIATPSGIAKDIALPYVDAGLNVIDLSGDFR LKDRQLYEKWYGKSAAPTEYIGKAEYGLAEFREKKETTFIANPGCYATATLLGLAPLA TNKLIDPTSIIVDAKSGISGAGKVPSASTHFTETNENMTLYKMNSHQHIPEIMQQLTK WDESIPAIQFSTSLIPITRGIFTTIYVKPKNPITQKELHKLYESTYDNAPFVRIQPEN VYPTVKQVTASNYCDIGLAYNEKTNVITIVSVIDNLVKGAAGQAIQNLNIMANFAESD GLRFIPVYP" misc_feature complement(1632731..1633759) /gene="argC" /locus_tag="lmo1591" /note="N-acetyl-gamma-glutamyl-phosphate reductase, common form; Region: argC; TIGR01850" /db_xref="CDD:273832" regulatory complement(1633767..1633772) /regulatory_class="ribosome_binding_site" regulatory complement(1633900..1633926) /regulatory_class="terminator" gene complement(1633933..1635144) /locus_tag="lmo1592" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986418" CDS complement(1633933..1635144) /locus_tag="lmo1592" /experiment="EXISTENCE:[PMID:19448609]" /note="Required for the synthesis of the thiazole moiety" /codon_start=1 /transl_table=11 /product="thiamine biosynthesis protein ThiI" /protein_id="NP_465117.1" /db_xref="GeneID:986418" /translation="MEFDRMLIRYGELSTKGKNRKQFVTKLAQNVKRAMTDLPEVRIH GERDRMYIILNGADYQLAEERLKPIFGIQSFSPAVRVNLDVEEVKAAALALVQDAHEE NGTFKVAARRSHREFPLDSNEINQEIGAYVLQNMEDLTVNVKNPDVKLTIDVRKEGVF LSCRTILGAAGLPVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFHSPPYTSEQ AKQKAIDLAAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRRMMLRITDELR RKRNGLAIVNGESLGQVASQTLESMLAINAVTATPIIRPVVSMDKNEIIQIAQKIDTY NLSVQPFEDCCTIFTPPSPKTKPKLDKIEHYESFTDFDALIAKALDNIETISVNVAET AQVKDEFADLF" misc_feature complement(1633993..1635138) /locus_tag="lmo1592" /note="Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis) [Coenzyme transport and metabolism, Translation, ribosomal structure and biogenesis]; Region: ThiI; COG0301" /db_xref="CDD:440070" gene complement(1635146..1636285) /locus_tag="lmo1593" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985205" CDS complement(1635146..1636285) /locus_tag="lmo1593" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="iron-sulfur cofactor synthesis protein NifS" /protein_id="NP_465118.1" /db_xref="GeneID:985205" /translation="MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKEL LDASRKQIAAMMSALPEEIIFTSGGTEGNNLAIKGLVYSYQNRGKHIITSSIEHPSVR VVMEELEQEGFTVKYLPVDKNGVIKLEELKAALTDETILVSIMGVNNEVGSIQPLQEI GEMLSVLENTFFHVDFVQAIGKIPLTLDANSIDLLTFSGHKFHALRGTGILFKRKNVH LHPEILGGGQEMGYRSGTENLAGNVALAKALRLTLENEPRKEALIEIRDYLLTKIAQM SDMTVHTKQSVAAPHIVCFSAKGHRGEILVHALEKEDIYISTTSACSSKQKLASSTLK AMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK" misc_feature complement(1635155..1636285) /locus_tag="lmo1593" /note="Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family [Amino acid transport and metabolism]; Region: NifS; COG1104" /db_xref="CDD:440721" regulatory complement(1635153..1635160) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1593" regulatory complement(1636297..1636302) /regulatory_class="ribosome_binding_site" regulatory complement(1636369..1636400) /regulatory_class="terminator" gene complement(1636412..1638127) /locus_tag="lmo1594" /db_xref="GeneID:986850" CDS complement(1636412..1638127) /locus_tag="lmo1594" /experiment="EXISTENCE:[PMID:19448609]" /note="acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation" /codon_start=1 /transl_table=11 /product="septation ring formation regulator EzrA" /protein_id="NP_465119.1" /db_xref="GeneID:986850" /translation="MYYMLIGFIIVVIAVIGAGYILKRKHYQRINELEEKKIKLRERP VIDELSKVKKLKLTGQTEALFESWRSSWDEIETRLFPDLEEVLLEAEMNTDRYKFRSA THAENDIEQMLVVIEKQMDQILGGLKELLISEEKNAKESRATKEKFAELRREVLTRGF KLGETLPYIETKLSELSESLNSYDSLTDQGDHLEAREIVIVVQKEMQVIEAQMERIPS LLHETDTILPEEMTKLRAGYEEMVRKGYYLAQMELDKEISRMKNQIDKMKKNVINLDL DEAEQGVEELHNEIDLFYDTLEHEAEARHFVKENHSPTSDKLQRQNAVSDALAEQITE VKQTYHVAEDDLAVYLKTSAKLSEAKENFEQLTALIASGEIAYSAAQDTLKEIDAALI TISTEQDKFAEELRSLRKDELEARDDAERMRRAIITLDRKMERERLPGLPEEYLSLRE HMGESIDALEKRLEEKPLNMKAVSQDWRIAEEDLTHLTEKAEEMMENVRLVEHVIQYA NRYRLRNKELADELVQAENHFYNDYQYKKALEIAVTALEKVETGAFKKVEKAYESKVS VDDIE" misc_feature complement(1636421..1638127) /locus_tag="lmo1594" /note="septation ring formation regulator EzrA; Provisional; Region: PRK04778" /db_xref="CDD:179877" regulatory complement(1638135..1638140) /regulatory_class="ribosome_binding_site" regulatory 1638407..1638412 /regulatory_class="ribosome_binding_site" gene 1638420..1638908 /locus_tag="lmo1595" /db_xref="GeneID:986055" CDS 1638420..1638908 /locus_tag="lmo1595" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465120.1" /db_xref="GeneID:986055" /translation="MIEIKKMTGTKEENYALALKQVQAMIHGEPNLIANLSNVSSIIN QALSDINWVGFYLLEKETNQLVLGPFQGLPACIRIPLGKGVCGSAASDQKTYIVENVH DFPGHIACDAASNSEIVLPIVKNNQLLGVLDIDSPLFNRFNEVDQLWLEKIRDAIVQE IN" misc_feature 1638441..1638905 /locus_tag="lmo1595" /note="GAF domain-containing protein, putative methionine-R-sulfoxide reductase [Defense mechanisms, Signal transduction mechanisms]; Region: MsrC; COG1956" /db_xref="CDD:441559" regulatory 1639106..1639111 /regulatory_class="ribosome_binding_site" gene 1639120..1639722 /gene="rpsD" /locus_tag="lmo1596" /db_xref="GeneID:985744" CDS 1639120..1639722 /gene="rpsD" /locus_tag="lmo1596" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S4" /protein_id="NP_465121.1" /db_xref="GeneID:985744" /translation="MARYTGPSWKVSRRLGISLSGTGKELERRPYAPGQHGPTQRKKI SEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLRGKHGENFMILLEQRLDNIVYRLG LARTRRAARQLVNHGHITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLEVSSF VPEYVTFDAEKLTGSLNRLPERSELAAEINEAFIVEFYSR" misc_feature 1639120..1639719 /gene="rpsD" /locus_tag="lmo1596" /note="30S ribosomal protein S4; Validated; Region: rpsD; PRK05327" /db_xref="CDD:235411" regulatory 1639736..1639770 /regulatory_class="terminator" gene complement(1639998..1640198) /locus_tag="lmo1596a" /db_xref="GeneID:16695814" CDS complement(1639998..1640198) /locus_tag="lmo1596a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475637.1" /db_xref="GeneID:16695814" /translation="MKKTILIVAMLLFIMLSFMDIMLISDVNISTIIGALLLGAVQTI IVLAPILIIILLVKLLKRRSTN" gene complement(1640225..1641004) /locus_tag="lmo1597" /db_xref="GeneID:984705" CDS complement(1640225..1641004) /locus_tag="lmo1597" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1597" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465122.1" /db_xref="GeneID:984705" /translation="MIDVPVTVSAGGGELNLTKKEIKEELAYQKQLVEKLRNADDNEE KIVKEYLADNDNAIANKIGNSEDSTEFIDTYIINDETQLIFTDTEVMLDTTEMSNENE ATSEEEKLLREEDSNESIISSIKEFGETVLFGQKVYAAASKTVSARHTRTVYAKVSGN KLFTAGIGAKFTYNGAKVTAQTTENYVKVNGISGVVWSVHNKKNGVQKPSIKKRVVYQ QATAKSGLTYKGNGLVVEEKYIRVNLECNHLGKVSKSSVVR" regulatory complement(1641252..1641275) /regulatory_class="terminator" gene complement(1641284..1642543) /gene="tyrS" /locus_tag="lmo1598" /db_xref="GeneID:985752" CDS complement(1641284..1642543) /gene="tyrS" /locus_tag="lmo1598" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="tyrosyl-tRNA synthetase" /protein_id="NP_465123.1" /db_xref="GeneID:985752" /translation="MNIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSM HIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLR VQLGKIFDFEGNSAASMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRLEVG ISFTEFAYQILQAMDFNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGL TIPLLTKADGTKFGKSEGGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEA EIDELAKQVETEPHLRAAQKTLAAEMTKFVHSEEALEQALKISKALFSGDVKALTADE IEQGFKDVPTFVAEDSEANLVDWLVTLGIEPSKRQAREDVGNGAIYINGERQQDLEKI MDASDRIENKFTIVRRGKKKYFLVSYK" misc_feature complement(1641287..1642543) /gene="tyrS" /locus_tag="lmo1598" /note="tyrosyl-tRNA synthetase; Provisional; Region: PRK13354" /db_xref="CDD:237360" regulatory complement(1642553..1642558) /regulatory_class="ribosome_binding_site" gene 1642603..1642811 /locus_tag="lmos59" /db_xref="GeneID:18245203" misc_RNA 1642603..1642811 /locus_tag="lmos59" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245203" gene complement(1642865..1643872) /gene="ccpA" /locus_tag="lmo1599" /db_xref="GeneID:985748" CDS complement(1642865..1643872) /gene="ccpA" /locus_tag="lmo1599" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="catabolite control protein A" /protein_id="NP_465124.1" /db_xref="GeneID:985748" /translation="MNVTIYDVAREANVSMATVSRVVNGNPNVKPVTRKKVLDVINQL GYRPNAVARGLASKRTTTVGVIIPDISNVFYAELARGIEDIATMYKYNIILSNSDENE DKELQVLNTLLGKQVDGIIYMGERISEQLQEEFDRSPAPVVLAGAVDMENKFASVNID YKQATKEAVKRFVDNGHKQIAFVSGSLNEPVNREMKLAGYKEALEEAGISYQEDYIIE AKYNYNAGVKVWAELSALSKKPNAVVVADDELAIGILNAALDAGIKVPEDLEVMTSNN TKLTLMSRPQLSTIVQPLYDIGAVAMRLLTKLMTSEEVDEKTVILPHSEKLRGTTKEK K" misc_feature complement(1642877..1643869) /gene="ccpA" /locus_tag="lmo1599" /note="catabolite control protein A; Region: ccpA; TIGR01481" /db_xref="CDD:130546" regulatory complement(1643883..1643888) /regulatory_class="ribosome_binding_site" regulatory complement(1644080..1644095) /regulatory_class="terminator" gene complement(1644106..1645191) /gene="aroA" /locus_tag="lmo1600" /db_xref="GeneID:985307" CDS complement(1644106..1645191) /gene="aroA" /locus_tag="lmo1600" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate" /codon_start=1 /transl_table=11 /product="bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase" /protein_id="NP_465125.1" /db_xref="GeneID:985307" /translation="MVNTNLEELRTQVDQLNIDLLELISKRANLVQEIGKIKGTQGSL RFDPLREREMLNTILAANEGPFEDSTVQKLFKEIFKAGLELQEEDHSKALLVSRKNKK EDTIVTVKGLPIGNGEPVFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAFKPRTSP YDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDYVDVIQIGARNMQNFELL KAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDI SAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHPDPAVALSDS AQQMDIPEFEEFWNAILASNLVPHKIK" misc_feature complement(1644118..1645191) /gene="aroA" /locus_tag="lmo1600" /note="bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed; Region: PRK12595" /db_xref="CDD:183614" regulatory complement(1645203..1645208) /regulatory_class="ribosome_binding_site" regulatory complement(1645380..1645395) /regulatory_class="terminator" gene complement(1645412..1645936) /locus_tag="lmo1601" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985749" CDS complement(1645412..1645936) /locus_tag="lmo1601" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="general stress protein" /protein_id="NP_465126.1" /db_xref="GeneID:985749" /translation="MAEKDGINTKDFLIGGLIGAIVGSAAALLFAPKSGKELREDLNT QVDTIKEKGNQWKDVAYEKGIEISGVAKGTKDKLVDSAGGFVDVVKDKSGKLADTVSK QSKAVKEVVSQNKEENQEAAKKAADAVKNEAKDAADDVEKAADKAKKEAKKAVDEGKD EAKKIASDVKKEVK" misc_feature complement(1645601..1645915) /locus_tag="lmo1601" /note="Gas vesicle protein YhaH [General function prediction only]; Region: GvpP; COG4980" /db_xref="CDD:444004" regulatory complement(1645945..1645950) /regulatory_class="ribosome_binding_site" gene complement(1645958..1646413) /locus_tag="lmo1602" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985745" CDS complement(1645958..1646413) /locus_tag="lmo1602" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465127.1" /db_xref="GeneID:985745" /translation="MIVILYIAALIAAIALLVIAIYLGKTLKSTSQTMDEVAKSLEKI TVEVQGITGQSQKLLDKTNTLLEDVNGKVAKVDPVFDAVGDIGTSLLGLSQSVRELAT LATNKVEQNEAKISQAVSISNSILSFREKMKANKAAKEAAKEAAEQSNF" misc_feature complement(1646027..1646383) /locus_tag="lmo1602" /note="Uncharacterized conserved protein YoxC, contains an MCP-like domain [Function unknown]; Region: COG4768" /db_xref="CDD:443800" regulatory complement(1646423..1646428) /regulatory_class="ribosome_binding_site" regulatory 1646656..1646661 /regulatory_class="ribosome_binding_site" gene 1646669..1647781 /locus_tag="lmo1603" /db_xref="GeneID:985743" CDS 1646669..1647781 /locus_tag="lmo1603" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aminopeptidase" /protein_id="NP_465128.1" /db_xref="GeneID:985743" /translation="MRDARIEKLAHNLINYSVKLGAGEKVLIENFGVQKELVMALVEE AYKAGGFPFVSLKEPQIDRAMMLGADSSQYAKIAEFEGNVMKEMDAYIGLRAGDNINE TSDVPADKLKIHGETVGKMHSDIRVKQTKWVVLRYPSSSMAQLAKMSTAGFEDFYFDV CNLDYGKMSDAMDGLVELMNKTDKVHLVGPGTDLTFSIKDIPAIKCAGEMNIPDGEVF TAPVRDSINGTLTYNTPSPYQGFTFENVSFTFKDGKIIEATANDTARINKVLDTDEGA RFVGEFAIGVNPFIHEPMQDILFDEKIEGSFHFTPGQCYDEAFNGNQSAIHWDLVNIQ RADYGGGEIYFDDVLIRKDGIFVLPELEALNPENLV" misc_feature 1646681..1647742 /locus_tag="lmo1603" /note="Leucyl aminopeptidase (aminopeptidase T) [Amino acid transport and metabolism]; Region: AmpS; COG2309" /db_xref="CDD:441883" regulatory 1647788..1647812 /regulatory_class="terminator" regulatory complement(1647788..1647812) /regulatory_class="terminator" gene complement(1647821..1648366) /locus_tag="lmo1604" /db_xref="GeneID:985746" CDS complement(1647821..1648366) /locus_tag="lmo1604" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="2-cys peroxiredoxin" /protein_id="NP_465129.1" /db_xref="GeneID:985746" /translation="MAERLVGTQAPRFEMEAVMPNQTFGKVSLEKNIEDDKWTILFFY PMDFTFVCPTEIVAISARSDEFDALNARIIGASTDTIHSHLAWTNTPIKEGGIGKLNY PLAADTNHQVASDYGVLIEEEGVALRGLFIINPKGEIQYEVVHHNNIGREVDEVLRVL QALQTGGLCPINWQPGEKTIV" misc_feature complement(1647839..1648351) /locus_tag="lmo1604" /note="Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides; Region: PRX_Typ2cys; cd03015" /db_xref="CDD:239313" misc_feature complement(order(1647851..1647862,1647893..1647895, 1647914..1647919,1647929..1647937,1647941..1647949, 1647986..1647988,1648016..1648018,1648205..1648207, 1648214..1648219,1648349..1648351)) /locus_tag="lmo1604" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:239313" misc_feature complement(order(1648001..1648003,1648037..1648039, 1648043..1648045,1648118..1648123,1648223..1648225)) /locus_tag="lmo1604" /note="decamer (pentamer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:239313" misc_feature complement(order(1647983..1647985,1648211..1648213, 1648220..1648222)) /locus_tag="lmo1604" /note="catalytic triad [active]" /db_xref="CDD:239313" misc_feature complement(order(1647860..1647862,1648211..1648213)) /locus_tag="lmo1604" /note="peroxidatic and resolving cysteines [active]" /db_xref="CDD:239313" regulatory complement(1648374..1648379) /regulatory_class="ribosome_binding_site" regulatory complement(1648475..1648500) /regulatory_class="terminator" gene complement(1648511..1649854) /gene="murC" /locus_tag="lmo1605" /db_xref="GeneID:985741" CDS complement(1648511..1649854) /gene="murC" /locus_tag="lmo1605" /EC_number="6.3.2.8" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramate--L-alanine ligase" /protein_id="NP_465130.1" /db_xref="GeneID:985741" /translation="MTIYHFVGIKGSGMSALAQILHDKGFQVQGSDVDKYFFTQKALE EKQIPIMTFSADNIQEGLTIIAGNAFPDTHEEIERALELGLSVIRYHKFLGQLIDGYT SIAITGSHGKTSTTGLLSHVVGAIRPTSYLIGDGTGSGTKDAEYFALEACEYQRHFLA YKPTYAIMTNIDWDHPDYFKSVDDVFNAFETLGKQVKKAVFALGDDAELRKLTLDIPI IYFGFGEENEFQAKNVIKETTGTKFDVYHREEFLSSFEIPAYGDHNVLNALSVIALCD YEGLPVEDVKNELKTFEGVKRRFSITEKGNQVLVDDYAHHPSEIRATVNAARQKYPDK KVVAVFQPHTFTRTRTFLQGFADSLNLADEVYLCDIFGSAREKTGNLTIADLAHKTKG NHIIKEEHTEELLKYPEAVILFMGAGDVQKFQAAYEKVLDHEFLTEADLKKSAIN" misc_feature complement(1648568..1649854) /gene="murC" /locus_tag="lmo1605" /note="UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family [Cell wall/membrane/envelope biogenesis]; Region: MurC; COG0773" /db_xref="CDD:440536" regulatory complement(1649863..1649867) /regulatory_class="ribosome_binding_site" gene complement(1650149..1652500) /locus_tag="lmo1606" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985737" CDS complement(1650149..1652500) /locus_tag="lmo1606" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA translocase" /protein_id="NP_465131.1" /db_xref="GeneID:985737" /translation="MGWFKDFFFGDMDEEIDTYEDTSSRKVEKKAKQRASEVLPKSNV TAIKTKERTIRNERPVAYKTAPKQKHMQPVKRQMKTQMVYQYPKGEFRFPLIPDKQKS QPIQPKKQPITERQVAETQPVKEETRKRPFTATDVPSPVYAFNKRPSKFEFAVTEAEE LSTIQEDLTITPVDLLDSAEAETIAFDAGLNRQIEEEVVSVPVMEEVVTEQPEVEVNP EPVEQQEPARVSLITEEPAQTKTTTRSKQVESNRQEQLLKSRIPFNVMMVKKDKQALQ KEDAQEINVQQPVEIEAEQTNIVQQTQVATASYPMNYEFPSFGLLHPPVSKREDDSWL QMQQEMLDETLENFNVQASVVNRTQGPAVTRFEVQPEKGVKVSKITNLTDDIKLNLAA KDIRIEAPIPGKSTVGIEIPNQTSRPVMLSELMNTEAFQTSASPLTAALGLDISGTPI ITDLQKMPHGLIAGATGSGKSVCINSLLVSLLYKATPDQLKLLLIDPKMVELAPYNRI PHLVSPVITDAKAATVALKWAVEEMERRYQLFSHTGVRNMEKYNEYASHPDHTGEKLP YILIVIDELADLMMVAPNDVEESISRIAQKARACGIHMIVATQRPSVDVITGLIKANI PTRVSFSVSSQIDSRTILDASGAEKLLGKGDMLFLPSGASKPVRLQGTFVSDEEIDAV VAHVRSQGEADYIFEEQELLVKETAKENTDELFEEACDFVLSQNAASTSLLQRHFRIG YNRAARLMESLENHQIVSGINGSKPRDVIITKDQLAKLRNKES" misc_feature complement(1651754..>1652194) /locus_tag="lmo1606" /note="ribonuclease E; Reviewed; Region: rne; PRK10811" /db_xref="CDD:236766" misc_feature complement(1650167..>1651558) /locus_tag="lmo1606" /note="DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, chromosome partitioning]; Region: FtsK; COG1674" /db_xref="CDD:441280" regulatory complement(1652508..1652513) /regulatory_class="ribosome_binding_site" regulatory complement(1652769..1652791) /regulatory_class="terminator" gene complement(1652810..1653427) /gene="pheT" /locus_tag="lmo1607" /db_xref="GeneID:985742" CDS complement(1652810..1653427) /gene="pheT" /locus_tag="lmo1607" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phenylalanyl-tRNA synthetase subunit beta" /protein_id="NP_465132.1" /db_xref="GeneID:985742" /translation="MIVNAFYNEKGVGDTLLIETGEVTFENREWERRGDVARIFDRET KEVAGFNIFNSSKYFDITANGKVELTEELVALMNRVIEKAGFEPEIVADLSPKFVVGY VESKEKHPNADKLNVCKINVGDKVLQIVCGAPNIDVGQKVVVAKIGAVMPSGLIIKPS NLRGEDSFGMVCAARELAIPDAPTEKGIMVLEESATIGEAFPVNF" misc_feature complement(1653149..1653352) /gene="pheT" /locus_tag="lmo1607" /note="Domain of unknown function (DUF4479); Region: DUF4479; pfam14794" /db_xref="CDD:434215" misc_feature complement(<1652825..1653220) /gene="pheT" /locus_tag="lmo1607" /note="phenylalanyl-tRNA synthetase subunit beta; Reviewed; Region: pheT; PRK00629" /db_xref="CDD:234804" gene complement(1653433..1654233) /locus_tag="lmo1608" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986017" CDS complement(1653433..1654233) /locus_tag="lmo1608" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465133.1" /db_xref="GeneID:986017" /translation="MAKMTTLKMKERLEKELQAPNRQFSYNRDNDALTVVQSGKKVTL AIPQIIANYENDGDAAVEKIVYYVEEGFRAAAGNVELENNKANVYPVVRATSFPGETK AGEVLLTDDHTAETKIFYAVDLGKSYRFIEESMLKKAQLTHEEIREAAFNNLANLEIP LKKDSVNGNDFYFVRTNDGYDASRLLNEAFLREMREKLTGEMVLAVPHQDVLIIGDIQ DNTGYDVLAHMTMDFFADGLVPITSLPFVYNNGKLEPIFIMAKNRLKE" misc_feature complement(1653436..1654224) /locus_tag="lmo1608" /note="hypothetical protein; Provisional; Region: PRK13668" /db_xref="CDD:237463" regulatory complement(1653435..1653440) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1608" regulatory complement(1654241..1654246) /regulatory_class="ribosome_binding_site" gene complement(1654268..1654579) /locus_tag="lmo1609" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985740" CDS complement(1654268..1654579) /locus_tag="lmo1609" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="NP_465134.1" /db_xref="GeneID:985740" /translation="MKNLESVEQFNAIKSEGKSVFMFSADWCGDCKFIEPVMPEIEAE NEDFSFYHVDRDEFIDLCADLAIFGIPSFLAFEDGEEVGRFVSKDRKTKEEINDFLAA I" misc_feature complement(1654277..1654558) /locus_tag="lmo1609" /note="TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox...; Region: TRX_family; cd02947" /db_xref="CDD:239245" misc_feature complement(order(1654487..1654489,1654496..1654498)) /locus_tag="lmo1609" /note="catalytic residues [active]" /db_xref="CDD:239245" regulatory complement(1654588..1654593) /regulatory_class="ribosome_binding_site" gene complement(1654691..1654909) /locus_tag="lmo1610" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985734" CDS complement(1654691..1654909) /locus_tag="lmo1610" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465135.1" /db_xref="GeneID:985734" /translation="MHKIMKKPVFVDGMLLLVASLVFLLGYATSMPYFRDSEIGWIWT TLIAGIITLFFTFFNDFLEKKKARSKVR" gene complement(1654902..1655975) /locus_tag="lmo1611" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985736" CDS complement(1654902..1655975) /locus_tag="lmo1611" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aminopeptidase" /protein_id="NP_465136.1" /db_xref="GeneID:985736" /translation="MEKETLAMFKELTELQGTSGDEHRIRAFMRKELEPVSDEIIQDG LGGIFGVRHGAEEGPRVLVAAHMDEVGFMVTQITDNGLLRFQTIGGWNPQVLQAQRVQ IMTPIGPVIGVVASVPPHLLSEAERSKPTDPKNLLIDIGADDKADAEKIGIKPGQFIV PVAEFTPLANPKKILAKAWDNRYGVGLAIELMKELKGESLPNTLFAGANVQEEVGLRG AGVSANMIKPDLFFALDASPANDTTGNKSQFGQIGQGFLLRIFDRTMIMHRGMREFLL DTAETNKIPYQYFVSPGGTDAGKVHTSLSGIPSAVIGVPARYIHSSNSILHVDDYAAA KEMITTLIRGLDKTTYETIKNNA" misc_feature complement(1654920..1655969) /locus_tag="lmo1611" /note="Putative aminopeptidase FrvX [Amino acid transport and metabolism, Carbohydrate transport and metabolism]; Region: FrvX; COG1363" /db_xref="CDD:440974" regulatory complement(1655985..1655991) /regulatory_class="ribosome_binding_site" regulatory 1656160..1656165 /regulatory_class="ribosome_binding_site" gene 1656173..1656484 /locus_tag="lmo1612" /db_xref="GeneID:985731" CDS 1656173..1656484 /locus_tag="lmo1612" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465137.1" /db_xref="GeneID:985731" /translation="MNWKAFIAGVGAGAAAGHLVYHYLLSDKTISGDVILEKVKDAFK QEGPIEGSWIQLKKQHYKKFAIDTFVYHGGITCIREGEKKQFEFIADANTGTIIDVYL A" misc_feature 1656173..1656475 /locus_tag="lmo1612" /note="Uncharacterized conserved protein YtzB [Function unknown]; Region: COG5584" /db_xref="CDD:444323" regulatory 1656494..1656515 /regulatory_class="terminator" regulatory complement(1656494..1656515) /regulatory_class="terminator" gene complement(1656521..1656769) /locus_tag="lmo1613" /db_xref="GeneID:985723" CDS complement(1656521..1656769) /locus_tag="lmo1613" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465138.1" /db_xref="GeneID:985723" /translation="MDIEQKKALVTRFAKIEGHVRSIKTMTEEERDLETIMQQIAAVK KAMDAAAKLIYTEQMKELIEQGETDEAVIKKKIDSFIR" misc_feature complement(1656524..1656757) /locus_tag="lmo1613" /note="Metal-sensitive transcriptional repressor; Region: Trns_repr_metal; pfam02583" /db_xref="CDD:426851" misc_feature complement(order(1656536..1656550,1656551..1656556, 1656560..1656565,1656581..1656583,1656590..1656598, 1656602..1656610,1656614..1656619,1656626..1656631, 1656638..1656643,1656647..1656652,1656656..1656664, 1656668..1656676,1656680..1656691,1656698..1656703, 1656707..1656712,1656719..1656721,1656728..1656733, 1656740..1656745,1656752..1656754)) /locus_tag="lmo1613" /note="putative homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:197393" misc_feature complement(order(1656536..1656547,1656596..1656598, 1656608..1656610,1656617..1656619,1656626..1656631, 1656638..1656643,1656647..1656652,1656656..1656664, 1656668..1656676,1656680..1656691,1656698..1656703, 1656707..1656712,1656719..1656721,1656728..1656733, 1656740..1656745,1656752..1656754)) /locus_tag="lmo1613" /note="putative homodimer interface [polypeptide binding]; other site" /db_xref="CDD:197393" misc_feature complement(order(1656584..1656586,1656596..1656598, 1656671..1656673)) /locus_tag="lmo1613" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:197393" misc_feature complement(order(1656548..1656550,1656551..1656556, 1656560..1656565,1656581..1656586,1656590..1656595, 1656602..1656607,1656614..1656616)) /locus_tag="lmo1613" /note="putative homodimer-homodimer interface [polypeptide binding]; other site" /db_xref="CDD:197393" regulatory complement(1656776..1656781) /regulatory_class="ribosome_binding_site" regulatory complement(1656885..1656902) /regulatory_class="terminator" gene complement(1656903..1657754) /locus_tag="lmo1614" /db_xref="GeneID:985733" CDS complement(1656903..1657754) /locus_tag="lmo1614" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465139.1" /db_xref="GeneID:985733" /translation="MDSIQIGKIKIYWLRGGYTHFDGGAMFGVVPKPLWEKKYPVNDK NQLANVTDPMFFQYLGKNYLIDSGLGNRRLTEKQKRNYGVTEESFVLEDLAQLSIAPE DIDYVLMTHLHFDHVLGLTGISEEGNDYSIFPNAEIWTSETEWEEMQHPNIRSKATYW QENWLRIEGQIHTFTKEKEFNDAIKMTHTGGHSNGHSVIWLESDGEKAIHMADIFPTF AHQNVLWVTAYDDYPMTSISAKQAIFKQTFGANYWFLSYHDSRFRAVQIAENGDVKAE LKIEHRN" misc_feature complement(1656981..1657730) /locus_tag="lmo1614" /note="Bacillus subtilis YtnP and related proteins; MBL-fold metallo hydrolase domain; Region: YtnP-like_MBL-fold; cd07728" /db_xref="CDD:293814" misc_feature complement(order(1656981..1656983,1657116..1657118, 1657176..1657181,1657407..1657412,1657416..1657418, 1657422..1657424)) /locus_tag="lmo1614" /note="putative active site [active]" /db_xref="CDD:293814" regulatory complement(1657763..1657768) /regulatory_class="ribosome_binding_site" regulatory complement(1657783..1657805) /regulatory_class="terminator" gene complement(1657815..1658459) /gene="trmB" /locus_tag="lmo1615" /gene_synonym="yggH" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985730" CDS complement(1657815..1658459) /gene="trmB" /locus_tag="lmo1615" /gene_synonym="yggH" /EC_number="2.1.1.33" /experiment="EXISTENCE:[PMID:19448609]" /note="tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine" /codon_start=1 /transl_table=11 /product="tRNA (guanine-N(7)-)-methyltransferase" /protein_id="NP_465140.1" /db_xref="GeneID:985730" /translation="MRVKHKPWAKDRLEEFPAIYIKNPEDFKGQWHEVFGNDNPIHIE IGSGKGQFISGMAKANPEINYIGIEMIESVLVSALDKAIEVDVPNLRLVARDAKLLED CFEKGEIAQIYLNFSDPWPKKRHTKRRLTNPTFLTIYERLLPKAGEIHFKTDNRSLFE YSLVAFSEYNMLLTFVSLDLHNSDYEGNIKTEYEEKFSAKGFPIYRLEAKFDRN" misc_feature complement(1657860..1658453) /gene="trmB" /locus_tag="lmo1615" /gene_synonym="yggH" /note="tRNA (guanine-N(7)-)-methyltransferase; Reviewed; Region: trmB; PRK00121" /db_xref="CDD:234649" gene complement(1658466..1659248) /locus_tag="lmo1616" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985729" CDS complement(1658466..1659248) /locus_tag="lmo1616" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465141.1" /db_xref="GeneID:985729" /translation="MKDNFFGREYDIAPAGGETGQAFVATHEDEKFFLKRNSSPFLAA LSVENIVPKLVWTRRVENGDVITAQKWVNCHILTREEMVGPRVAKLLAKIHRSENLQH MLAKIENCYFSADQLLSLVKVNTRANNNLSKEIIEAVHYLEQNLSAAQTNNYVVCHGD VNHNNWIISEENELFLVDWDGAMLADPANDIGMILYQYIPREDWVSWLSNYGTTLTEE LHRKLKWYTICQTVMQLTTNQTDEANERAKQIFQNAIEDDEV" misc_feature complement(1658571..1659206) /locus_tag="lmo1616" /note="Phosphotransferase enzyme family; Region: APH; pfam01636" /db_xref="CDD:426359" misc_feature complement(1658544..1658849) /locus_tag="lmo1616" /note="Thiamine kinase or a related kinase [Coenzyme transport and metabolism]; Region: CotS; COG0510" /db_xref="CDD:440276" regulatory complement(1658468..1658473) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1616" regulatory complement(1659257..1659262) /regulatory_class="ribosome_binding_site" regulatory complement(1659421..1659446) /regulatory_class="terminator" gene complement(1659457..1660926) /locus_tag="lmo1617" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985727" CDS complement(1659457..1660926) /locus_tag="lmo1617" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="multidrug transporter" /protein_id="NP_465142.1" /db_xref="GeneID:985727" /translation="MNMKAASTSVKRNGILIVMLMGAFVTILNQTLMNVALPSIMKDF GITASQGQWLSTGFMLVNGVMIPMTAFLIERFTTRQLYLFAMITFAIGTAIGGFATDY TMLIAGRMVQAIGAGIVMPLLTVVVLNLFPMERRGRAMGLIGLAMNFAPAIGPTLSGW IVQQYDWRNLFFIIIPFAILDIVVAIFLLKNVGKRTFPKLDVLGVIMSTVGFGSLLLG FSNAGDHDWLTWKVAGFIILGLVVLGIFIRYQTSNKAPLLNFRVFKYPTFALTTAISF FVVMGLFGGMLLLPIFLQTVRGFSPLESGLVLLPGALVTAILSPVTGVMFDRFGAKYL SLVGLIIMAGSTFMFTNLDESTTLTFIIIVQTIRSAGMAMVMMPLQTAALNSLPLKLA SHGSAMFNTMRQVAGSIGTAALITVMSKSAASFATKLGPADVIGKTKTDIANHVLIHG IETAFLVAGILSVVACVLALFIQKNRSAMDPIVTKTEKA" misc_feature complement(1659511..1660872) /locus_tag="lmo1617" /note="Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_LmrB_MDR_like; cd17503" /db_xref="CDD:341046" misc_feature complement(order(1659706..1659708,1659715..1659720, 1659727..1659732,1659739..1659741,1659787..1659789, 1659799..1659801,1659811..1659816,1659970..1659972, 1659982..1659984,1660066..1660068,1660075..1660083, 1660090..1660095,1660102..1660104,1660474..1660476, 1660483..1660488,1660495..1660497,1660555..1660557, 1660564..1660572,1660576..1660581,1660729..1660731, 1660825..1660827,1660834..1660839,1660846..1660851)) /locus_tag="lmo1617" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341046" misc_feature complement(<1660186..1660524) /locus_tag="lmo1617" /note="NAD(P) transhydrogenase beta subunit; Region: PNTB; cl22917" /db_xref="CDD:473992" gene complement(1660923..1661363) /locus_tag="lmo1618" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985724" CDS complement(1660923..1661363) /locus_tag="lmo1618" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="NP_465143.1" /db_xref="GeneID:985724" /translation="MDEKLVKEVIFSFREVQRKTHHVLAEEAANREITTTQLLAIREL QRESELTLGELAERMKLGKSTVSGIVDRLVKAGFLKRTRNENNRRALSLELTEKGATK AAETYHVFFNRLEPILEIGEDRLKEMLKMHQEIITILEREGARD" misc_feature complement(1660971..1661360) /locus_tag="lmo1618" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" regulatory complement(1660936..1660941) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1618" regulatory complement(1661370..1661375) /regulatory_class="ribosome_binding_site" regulatory complement(1661556..1661575) /regulatory_class="terminator" gene complement(1661588..1662457) /gene="daaA" /locus_tag="lmo1619" /db_xref="GeneID:985722" CDS complement(1661588..1662457) /gene="daaA" /locus_tag="lmo1619" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="D-amino acid aminotransferase" /protein_id="NP_465144.1" /db_xref="GeneID:985722" /translation="MKVLVNNHLVEREDATVDIEDRGYQFGDGVYEVVRLYNGKFFTY NEHIDRLYASAAKIDLVIPYSKEELRELLEKLVAENNINTGNVYLQVTRGVQNPRNHV IPDDFPLEGVLTAAAREVPRNERQFVEGGTAITEEDVRWLRCDIKSLNLLGNILAKNK AHQQNALEAILHRGEQVTECSASNVSIIKDGVLWTHAADNLILNGITRQVIIDVAKKN GIPVKEADFTLTDLREADEVFISSTTIEITPITHIDGVQVADGKRGPITAQLHQYFVE EITRACGELVFAK" misc_feature complement(1661621..1662454) /gene="daaA" /locus_tag="lmo1619" /note="D-amino acid aminotransferase; Region: D_amino_aminoT; TIGR01121" /db_xref="CDD:130191" misc_feature complement(order(1661912..1661914,1661969..1661971, 1661981..1661986,1661993..1661998,1662002..1662016, 1662110..1662112,1662122..1662124,1662182..1662184, 1662188..1662190,1662194..1662196,1662365..1662367, 1662374..1662403,1662407..1662412)) /gene="daaA" /locus_tag="lmo1619" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:238799" misc_feature complement(order(1661729..1661731,1661837..1661842, 1661921..1661923,1662005..1662007,1662017..1662019, 1662308..1662310,1662365..1662367,1662380..1662382)) /gene="daaA" /locus_tag="lmo1619" /note="substrate-cofactor binding pocket [active]" /db_xref="CDD:238799" misc_feature complement(order(1661729..1661731,1661837..1661839, 1662017..1662019,1662308..1662310,1662365..1662367)) /gene="daaA" /locus_tag="lmo1619" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:238799" misc_feature complement(1662017..1662019) /gene="daaA" /locus_tag="lmo1619" /note="catalytic residue [active]" /db_xref="CDD:238799" regulatory complement(1662466..1662471) /regulatory_class="ribosome_binding_site" regulatory complement(1662521..1662547) /regulatory_class="terminator" gene complement(1662570..1663982) /locus_tag="lmo1620" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985721" CDS complement(1662570..1663982) /locus_tag="lmo1620" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dipeptidase PepV" /protein_id="NP_465145.1" /db_xref="GeneID:985721" /translation="MTEINWQKEVEARKDDFLEDLKGLLRIPSVRDDSKKTEDAPFGP DVKRALDYMMELGKKDGFTAKEVGNVAGHLEYGQGEELVGVLGHVDVVPVGDGWTNGP FEPTLRDGKLYARGVADDKGPTIAGYYALKIIKELGLPLSRRVRIIIGSDEESGMSCV ERYFETEEQPTLGFVPDAEFPIIHAEKGISELDVSFKDGEAGGEAAFRLLSVESGERY NMVPDHATAILEDVKDFDKVASAFKTFLANHPVEGTLEENGKSVKINIVGKSAHAMEP NNGVNAGLHLVAFLGKFKLTGAANDFVTFGRDYLFGDSRAVKLGISYEDAESGELTMN VGVIRYDVAEGGKYGLNFRYPVTASMDKLKNKMQTVVYEYNAQYTHYEDSKPLFVPKD HPLIQVLQEVYTKQTGEEATLLAIGGGTYARHMETGVAFGALFPGREDTMHQKDEFSY FDDLLKATAIYAEALYKLAK" misc_feature complement(1662573..1663979) /locus_tag="lmo1620" /note="dipeptidase PepV; Reviewed; Region: PRK07318" /db_xref="CDD:235988" misc_feature complement(order(1662654..1662659,1662663..1662665, 1662726..1662731,1662924..1662926,1663167..1663169, 1663326..1663328,1663449..1663454,1663521..1663526, 1663623..1663628,1663719..1663721)) /locus_tag="lmo1620" /note="active site" /db_xref="CDD:349884" regulatory complement(1663994..1663999) /regulatory_class="ribosome_binding_site" gene complement(1664057..1664470) /locus_tag="lmo1621" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985720" CDS complement(1664057..1664470) /locus_tag="lmo1621" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465146.1" /db_xref="GeneID:985720" /translation="MKPIYPAVKAVIVKDGKFLALKKKGVEGEVFELPGGRMNYGETH GEALFREVYEETKLQVQPFILYDTWEFFHEDFQITGVIYLVEMPEGGEIELSDEHEEY RFLPLEKESLNVMDIVFSSRMERWDFEAIKGFMRK" misc_feature complement(1664126..1664461) /locus_tag="lmo1621" /note="MutT homolog-1 and similar proteins; Region: NUDIX_MutT_Nudt1; cd04699" /db_xref="CDD:467579" regulatory complement(1664481..1664486) /regulatory_class="ribosome_binding_site" regulatory 1664559..1664564 /regulatory_class="ribosome_binding_site" gene 1664575..1665405 /locus_tag="lmo1622" /db_xref="GeneID:985726" CDS 1664575..1665405 /locus_tag="lmo1622" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465147.1" /db_xref="GeneID:985726" /translation="MKKITPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMA AEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDYENITSLSEQISQFDTILIGPGL GLDAYAEEIFRLVLQKSTEHQQVIIDGDGITIYAKGENPHPAAKLTFTPHAGEWERLK VLAPDAVTPTDVALAIDATIVLKGHRTKVYSGESAWQNMYGTPAMATGGMGDTLAGTI CGLMAQTEKPITGTLAAVFLHSYIGEILAKKRYVVLPTEIAEELPTYLKIFSETDEHA " misc_feature 1664584..1665387 /locus_tag="lmo1622" /note="NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate dehydratase domain [Nucleotide transport and metabolism]; Region: Nnr2; COG0063" /db_xref="CDD:439833" regulatory 1665414..1665436 /regulatory_class="terminator" regulatory complement(1665414..1665436) /regulatory_class="terminator" gene complement(1665444..1666097) /locus_tag="lmo1623" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985719" CDS complement(1665444..1666097) /locus_tag="lmo1623" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465148.1" /db_xref="GeneID:985719" /translation="MKKTPFIISGIGLLGFIFFMTGVMTGAKWIQRFDHYWNSVIRVG ITDTKTTVISYLTDIGGVATICILTAIIIIVFVFMRKVDTAIWFGSIVLIGGALIPSI IKNIVQRPRPTYKLIEQGGFSFPSGHSTGSTVFYGMLAFLLILYVSRSWLRFTIGILA LGIVIFVMYSRVYLGVHFPSDVVAGFLIGNAALFSGIGCYFIWNEKLALWANKFKKA" misc_feature complement(1665489..1666031) /locus_tag="lmo1623" /note="PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase; Region: PAP2_like_2; cd03392" /db_xref="CDD:239486" misc_feature complement(order(1665555..1665557,1665567..1665569, 1665585..1665587,1665714..1665722,1665765..1665767, 1665786..1665788)) /locus_tag="lmo1623" /note="active site" /db_xref="CDD:239486" regulatory complement(1666103..1666108) /regulatory_class="ribosome_binding_site" gene complement(1666107..1667720) /locus_tag="lmo1624" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985718" CDS complement(1666107..1667720) /locus_tag="lmo1624" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_465149.1" /db_xref="GeneID:985718" /translation="MGSKLLRGTFILTLGTLISKVLGILYVIPFYAIIGGDEPALLYN FGYVPYQLFLSIATAGIPLAVAKYIAKYNAMEEYAVGRRLFKTGVYLMIFSGIVCFLA MYGLAPTLARMQQLEGGYSLADGIQVIRAVSFALLIIPVMSLLRGFFQGYNSMGPSAV SQVLEQVVRIMFLLAGTFIVMYVLDGNVVTAISIATFSAFVGAFASLLLLLWYFYKRK PGLDRMLLEDRGTVKISIPTLYKDIILSAIPFIIVGSATSLYQLIDQFTLGRVLEYIG ITPELVNSYVAIINFDVQKLIMIPGTLAIAFSMALVPLVTGAYVRKEYAQVKRQLNDV FQILLFLTIPACFGIAMLARPLFTVFFSPSDNGTELLQLFAPIAILFSLFSVSAAVLQ GIDEQRFTVLGLLLGLLAKSVLQMPLIMLFEAKGSIIATGIGYAVSCIFMLLIIKKYV RFSFKVILRRTVLFFVMTAIMGLVVIALYIMMSNFVTTDRKIPALIITIVCGGVGAIF YGYMAFKLHLSDKLFGPRGTRLREKLRIR" misc_feature complement(1666113..1667720) /locus_tag="lmo1624" /note="Stage V sporulation protein SpoVB/SpoIIIF, required for spore cortex synthesis [Cell cycle control, cell division, chromosome partitioning]; Region: SpoVB; COG5841" /db_xref="CDD:444543" regulatory complement(1667728..1667733) /regulatory_class="ribosome_binding_site" regulatory complement(1667789..1667818) /regulatory_class="terminator" gene complement(1667831..1669444) /locus_tag="lmo1625" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985717" CDS complement(1667831..1669444) /locus_tag="lmo1625" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_465150.1" /db_xref="GeneID:985717" /translation="MSSKLMRGTAVLTAGTLLSKILGILYVIPFYWIAGGEQATILYQ YGYVPYQIFLNIATAGVPLAVAKYISKYNSLNEYALSQRLYRSSTYLMIFTGIASFLI MYIFAPILAGMQEVSGGTSIEDITTVIRAVSFALLIIPVMSLLRGYFQGFHSMGPSAV SQVIEQIARIVFLLASTYIVLHLIGGSLVTAMSLATFAAFVGAFFSLICLIWYYRKRK PGIQKMIDGSDNKLRVSTFHLLKEISISAVPFIIVGMAMSLYQQIDLFTFARILTYDG MDGKTAEDLLSIFNFSVQKIIMIPGTLALAFSMTLVPLVAASFHKGRIREVHHHLTAV FQVLLFLVVPACLGIALLAVPLYTIFYGYNTDGSMLLQFFAPFAIFFSLFSVTAAILQ GIDEQRYTVLSLLLGLLTKSVLQMPLILLFGAKGGALATGLGYIVSVVFTIFIIKKYA KYSFKYLFRRLILILGISAVMLLSVWLIYHGLILFLNPHARLSALVIVFVSAGFGAYI YAFLAAKAGLLNYILGDRMYKIRKKLHLI" misc_feature complement(1667843..1669444) /locus_tag="lmo1625" /note="Stage V sporulation protein SpoVB/SpoIIIF, required for spore cortex synthesis [Cell cycle control, cell division, chromosome partitioning]; Region: SpoVB; COG5841" /db_xref="CDD:444543" regulatory complement(1669456..1669461) /regulatory_class="ribosome_binding_site" gene complement(1669529..1669966) /locus_tag="lmo1626" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985552" CDS complement(1669529..1669966) /locus_tag="lmo1626" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1626" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465151.1" /db_xref="GeneID:985552" /translation="MSVEVKPEHARMLNNTKNVTLGIAIVSTIQAVLSAVSIVGLFAL QQRKEVLANAHATAVVQNTIMTTTIMAVICIAFTIMLFLSFNKLRKGIIITPLVYYLY AAFTILGVILSMINSGVNFVSLVLPAVLLALSVTCILNLRRMR" regulatory complement(1669974..1669979) /regulatory_class="ribosome_binding_site" gene complement(1670037..1670810) /gene="trpA" /locus_tag="lmo1627" /db_xref="GeneID:985711" CDS complement(1670037..1670810) /gene="trpA" /locus_tag="lmo1627" /EC_number="4.2.1.20" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis" /codon_start=1 /transl_table=11 /product="tryptophan synthase subunit alpha" /protein_id="NP_465152.1" /db_xref="GeneID:985711" /translation="MTKTLTNKLAEKEHAAVVTYIMGGDGGLDNLEEQLLFLEKSGVS AIEIGIPFSDPVADGPIIQLAGLRALKEQVSLEAILNKLAMSKVQIPLIIMSYINPIF HLGIPKFVELVQKTPVKGLIIPDLPYEHQKLITPELQGTDIALIPLVSLTSPKERLEE IAKQAEGFIYAVTVNGTTGVRSEFDAHIDSHLAYLKSISPVPVLAGFGVSSIEHVEKF AHVCDGVIIGSKVVQMLHEEKTAELGAFLQKAAEVRIKN" misc_feature complement(1670055..1670789) /gene="trpA" /locus_tag="lmo1627" /note="tryptophan synthase subunit alpha; Provisional; Region: trpA; PRK13111" /db_xref="CDD:237285" misc_feature complement(order(1670124..1670129,1670187..1670192, 1670274..1670279,1670301..1670303,1670625..1670627, 1670637..1670639,1670670..1670672)) /gene="trpA" /locus_tag="lmo1627" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:240075" misc_feature complement(order(1670277..1670279,1670520..1670522, 1670637..1670639,1670670..1670672)) /gene="trpA" /locus_tag="lmo1627" /note="active site" /db_xref="CDD:240075" misc_feature complement(order(1670520..1670522,1670637..1670639, 1670670..1670672)) /gene="trpA" /locus_tag="lmo1627" /note="catalytic residues [active]" /db_xref="CDD:240075" misc_feature complement(order(1670340..1670342,1670349..1670357, 1670361..1670363,1670421..1670423,1670430..1670432, 1670436..1670441,1670505..1670507,1670514..1670516, 1670619..1670624,1670631..1670633,1670640..1670642, 1670646..1670657)) /gene="trpA" /locus_tag="lmo1627" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:240075" gene complement(1670803..1672005) /gene="trpB" /locus_tag="lmo1628" /db_xref="GeneID:985710" CDS complement(1670803..1672005) /gene="trpB" /locus_tag="lmo1628" /EC_number="4.2.1.20" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate" /codon_start=1 /transl_table=11 /product="tryptophan synthase subunit beta" /protein_id="NP_465153.1" /db_xref="GeneID:985710" /translation="MTYQAPDENGFYGKFGGRFVPETLMKAVKELDEAYQASKTDPAF QKELNYYLKEYVGRETPLYFAEQLTAHAGGAKIYLKREDLNHTGAHKINNTIGQALLA RQMGKQKVVAETGAGQHGVATATVAALFNMKCTIFMGEEDVKRQSLNVFRMELLGAKV VSVKAGSRTLKDAVNEALRFWVANVEDTHYIMGSVLGPHPFPEIVRDYQSVIGIEARK QHLEKEGKLPDAIVACVGGGSNAMGLFYPFVDDASVQMHGVEAAGHGLETEFHAATIS KGEIGILHGAMMDVLQDENGQILEAFSISAGLDYPGIGPEHSFFRDLGRAAYHSVTDD EAVEAFQLLCRTEGIIPALESSHAISYAVKLASKMRPEESMVVCLSGRGDKDVNQLKE RLEGQTND" misc_feature complement(1670815..1672005) /gene="trpB" /locus_tag="lmo1628" /note="Tryptophan synthase beta chain [Amino acid transport and metabolism]; Region: TrpB; COG0133" /db_xref="CDD:439903" regulatory complement(1670820..1670825) /regulatory_class="ribosome_binding_site" /gene="trpB" /locus_tag="lmo1628" gene complement(1672008..1672616) /gene="trpF" /locus_tag="lmo1629" /db_xref="GeneID:985716" CDS complement(1672008..1672616) /gene="trpF" /locus_tag="lmo1629" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis" /codon_start=1 /transl_table=11 /product="N-(5'-phosphoribosyl)anthranilate isomerase" /protein_id="NP_465154.1" /db_xref="GeneID:985716" /translation="MIVKICGLKKAVDVAAAVENGADMIGFVFAKSKRQVTVDEAHEL AKNIPAGVKKVGVFVNPTEEELTAAIKGVPLDIVQLHGQEPAEQANRTDAEVIKAFPV KDGKLPDNINDYPNAYILLDAPAEEYEGGSGKTFDWDKIDRDLLTKNKLIIAGGLNAQ NVQEAIKRFEPYAVDISSGVETNGEKDPQKIKCFIKTAKGVE" misc_feature complement(1672011..1672616) /gene="trpF" /locus_tag="lmo1629" /note="phosphoribosylanthranilate isomerase; Region: PRK01222" /db_xref="CDD:234923" misc_feature complement(order(1672083..1672088,1672092..1672094, 1672251..1672253,1672374..1672376,1672380..1672382, 1672533..1672535,1672599..1672601,1672605..1672607)) /gene="trpF" /locus_tag="lmo1629" /note="active site" /db_xref="CDD:238237" regulatory complement(1672015..1672020) /regulatory_class="ribosome_binding_site" /gene="trpF" /locus_tag="lmo1629" gene complement(1672613..1673371) /gene="trpC" /locus_tag="lmo1630" /db_xref="GeneID:985709" CDS complement(1672613..1673371) /gene="trpC" /locus_tag="lmo1630" /EC_number="4.1.1.48" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water" /codon_start=1 /transl_table=11 /product="indole-3-glycerol phosphate synthase" /protein_id="NP_465155.1" /db_xref="GeneID:985709" /translation="MTFLEEILAQKEVEVAKMPLEQVAEKRKTYSFYEFLKANTNTMQ LIAEVKRASPSKGEINMGVNPVLQAKSYQAAGAGMISVLTDPVFFKGSIEDLREVAKN VGIPVLCKDFIISEKQLIRARNAGATVVLLIISALTEEKLITLFEQALALDLEVLVEV HDQEELAVAQKIGAQLIGVNNRNLHTFEVDIAVSERLASDFSSDACFISESGFRTAED VARVSQKYDAVLVGEALMREATPEVAAKSLKVTR" misc_feature complement(1672625..1673371) /gene="trpC" /locus_tag="lmo1630" /note="indole-3-glycerol phosphate synthase TrpC; Region: trpC; PRK00278" /db_xref="CDD:234710" misc_feature complement(order(1672673..1672678,1672736..1672741, 1672820..1672822,1672826..1672828,1672832..1672834, 1672895..1672897,1672973..1672975,1673036..1673038, 1673042..1673044,1673105..1673107,1673207..1673215, 1673222..1673224,1673228..1673230)) /gene="trpC" /locus_tag="lmo1630" /note="active site" /db_xref="CDD:238203" misc_feature complement(order(1672832..1672834,1672895..1672897, 1673042..1673044,1673222..1673224,1673228..1673230)) /gene="trpC" /locus_tag="lmo1630" /note="ribulose/triose binding site [chemical binding]; other site" /db_xref="CDD:238203" misc_feature complement(order(1672673..1672678,1672736..1672738, 1673222..1673224)) /gene="trpC" /locus_tag="lmo1630" /note="phosphate binding site [ion binding]; other site" /db_xref="CDD:238203" misc_feature complement(order(1672820..1672822,1672826..1672828, 1673105..1673107,1673210..1673212)) /gene="trpC" /locus_tag="lmo1630" /note="substrate (anthranilate) binding pocket [chemical binding]; other site" /db_xref="CDD:238203" misc_feature complement(order(1672820..1672822,1672973..1672975, 1673036..1673038,1673042..1673044,1673105..1673107)) /gene="trpC" /locus_tag="lmo1630" /note="product (indole) binding pocket [chemical binding]; other site" /db_xref="CDD:238203" regulatory complement(1672624..1672629) /regulatory_class="ribosome_binding_site" /gene="trpC" /locus_tag="lmo1630" gene complement(1673368..1674387) /gene="trpD" /locus_tag="lmo1631" /db_xref="GeneID:985706" CDS complement(1673368..1674387) /gene="trpD" /locus_tag="lmo1631" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate" /codon_start=1 /transl_table=11 /product="anthranilate phosphoribosyltransferase" /protein_id="NP_465156.1" /db_xref="GeneID:985706" /translation="MEILLQKVYDQENLSKEEMNIIATEIFEGRLSKTKMAAFLMALK VKGETAEEMAGIAQAMQQVAIQVAFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAG IPVAKHGNRSISSRSGSADVCQELGIDINLRPEDMTYLLEKVGIAFLFAPHVHPNMKY VMDVRKELGTPTIFNLIGPLTNPVHLETQLMGIYRRDLLEQTAEVLGQLGRKRAVVLN GAGFMDEASLAGENHYALYENGEVHLYTLRPEDVGLTSYPLEAITGGDAKENAAILRS VLEGEPGAYLDTVLLNAGFGLFANGKVETVQEGVDLAKDLISSGLAKQKLADLITYQK EVLAK" misc_feature complement(1673380..1674387) /gene="trpD" /locus_tag="lmo1631" /note="anthranilate phosphoribosyltransferase; Provisional; Region: trpD; PRK00188" /db_xref="CDD:234682" regulatory complement(1673382..1673387) /regulatory_class="ribosome_binding_site" /gene="trpD" /locus_tag="lmo1631" gene complement(1674359..1674964) /gene="trpG" /locus_tag="lmo1632" /db_xref="GeneID:985715" CDS complement(1674359..1674964) /gene="trpG" /locus_tag="lmo1632" /experiment="EXISTENCE:[PMID:19448609]" /note="TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity" /codon_start=1 /transl_table=11 /product="anthranilate synthase subunit beta" /protein_id="NP_465157.1" /db_xref="GeneID:985715" /translation="MILLIDNYDSFTFNLEQYLAEFSEVVVKRNDAADLIKIAALADG IVLSPGPGKPSDAGLLEEVVAKFAKEKPLLGICLGHQAIGEVFGGEVKRAAKIRHGKV STMRQTAGAIFANLPEEMPVMRYHSLIVDKNTLPDVLEVLAIATDDSEVMAMKVKDYP VYGLQFHPESIGTNDGKQMMENFIHIVEGARENGNLTTKSI" misc_feature complement(1674398..1674961) /gene="trpG" /locus_tag="lmo1632" /note="Anthranilate/para-aminobenzoate synthase component II (glutamine amidotransferase) [Amino acid transport and metabolism, Coenzyme transport and metabolism]; Region: PabA; COG0512" /db_xref="CDD:440278" regulatory complement(1674397..1674402) /regulatory_class="ribosome_binding_site" /gene="trpG" /locus_tag="lmo1632" gene complement(1674961..1676325) /gene="trpE" /locus_tag="lmo1633" /db_xref="GeneID:985705" CDS complement(1674961..1676325) /gene="trpE" /locus_tag="lmo1633" /experiment="EXISTENCE:[PMID:19448609]" /note="with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine" /codon_start=1 /transl_table=11 /product="anthranilate synthase subunit alpha" /protein_id="NP_465158.1" /db_xref="GeneID:985705" /translation="MRKMKKMDADTLTAILAFQRLSGTGKSLLEGAAKDAEAGRYSII AINPVHEIKVYQHDYYIDGTHQVVADPLKEIELFIEKAREDELELPLDSGAIGYVGYD VIALYEDLGEIPVETRDIPDIRFYVYESFVIMDHQAEELILVQDNCYSGRSEADLDKA LESMLTELTTPKKDEHKAVHVPKMSYKSNYTKDEYMGLVKKAKTYIQEGDFFQIVLSQ RLEADFTVKPFDYYRKLRLLNPSPYLYFIDFGDTVLIGSSPESLIKTKGRTVITNPIA GTRRRGATKQEDELLASELLSDEKELAEHRMLVDLGRNDIGKIAETGSVHVPVYLTIE RYRFLMHLVSVVEGTLKTGLTAIDALRSTLPAGTVSGAPKIRAMERIYEWENVKRGPY AGAVGYLTKNGDSDFALSIRTMVLHNGKAYVQAGAGIVYDSDPESEYLETLQKAKALL EVGE" misc_feature complement(1674964..1676301) /gene="trpE" /locus_tag="lmo1633" /note="anthranilate synthase component I, non-proteobacterial lineages; Region: trpE_most; TIGR00564" /db_xref="CDD:273142" regulatory complement(1674972..1674977) /regulatory_class="ribosome_binding_site" /gene="trpE" /locus_tag="lmo1633" regulatory complement(1676332..1676337) /regulatory_class="ribosome_binding_site" gene 1676392..1676617 /locus_tag="lmos60" /db_xref="GeneID:18245204" misc_RNA 1676392..1676617 /locus_tag="lmos60" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245204" gene 1676666..1676907 /locus_tag="lmos61" /db_xref="GeneID:18245118" misc_RNA 1676666..1676907 /locus_tag="lmos61" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245118" regulatory 1677394..1677399 /regulatory_class="ribosome_binding_site" gene 1677409..1680009 /locus_tag="lmo1634" /db_xref="GeneID:985703" CDS 1677409..1680009 /locus_tag="lmo1634" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="bifunctional acetaldehyde-CoA/alcohol dehydrogenase" /protein_id="NP_465159.1" /db_xref="GeneID:985703" /translation="MAIKENAAQEVLEVQKVIDRLADNGQKALKAFESYNQEQVDNIV HAMALAGLDQHMPLAKLAVEETGRGLYEDKCIKNIFATEYIWNNIKNNKTVGVINEDL QTGVIEIAEPVGVVAGVTPVTNPTSTTLFKAIIAIKTRNPIIFAFHPSAQRCSSAAAK VVYDAAIAAGAPEHCIQWVEKPSLEATKQLMNHDKVALVLATGGAGMVKSAYSTGKPA LGVGPGNVPAYIDKTAKIKRSVNDIILSKSFDQGMICASEQAVIVDKEVAKEVKAEME ANNCYFVKGAEFKKLESYVINPEKGTLNPDVVGKSPAWIANQAGFKVPEDTKILVAEI KGVGDKYPLSHEKLSPVLAFIEAANQAEAFDRCEEMLVYGGLGHSAVIHSTDKEVQKA FGIRMKACRIIVNAPSAQGGIGDIYNGFIPSLTLGCGSYGKNSVSQNVSATNLLNVKR IADRRNNMQWFKLPPKIFFEKYSTQYLQKMEGVERVFIVTDPGMVQFKYVDVVIEHLK KRGNDVSYQVFADVEPDPSDVTVYKGAELMKDFKPDTIIALGGGSAMDAAKGMWLFYE HPEASFFGLKQKFLDIRKRTFKYPKLGGKAKFVAIPTTSGTGSEVTPFAVITDKENNI KYPLADYELTPDVAIVDAQYVTTVPAHITADTGMDVLTHAIESYVSVMASDYTRGLSI RAIELVFENLRESVLTGDPDAREKMHNASALAGMAFANAFLGINHSLAHKIGPEFHIP HGRANAILMPHVIRYNALKPKKHALFPRYESFRADEDYARISRIIGFPAATTEEGVKS LVDEIIKLGKDVGIDMSLKGQNVAKKDLDAVVDTLADRAFMDQCTTANPKQPLVSELK EIYLEAYKGV" misc_feature 1677421..1679997 /locus_tag="lmo1634" /note="bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional; Region: PRK13805" /db_xref="CDD:237515" regulatory 1680119..1680124 /regulatory_class="ribosome_binding_site" gene 1680132..1680560 /locus_tag="lmo1635" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985702" CDS 1680132..1680560 /locus_tag="lmo1635" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465160.1" /db_xref="GeneID:985702" /translation="MIQATVPYFTFDGEATEALDFYKKVFQAEITQMHYFHETEGFSG DKKQGERILHARLAKDEKDLFYFSDTVEGETDAGNRLALAVNFSSEAEFVQAFILLSK TGTVEIPIQNTFWGAKYAKVIDHYSIDWHLNLENESTTKV" misc_feature 1680147..1680530 /locus_tag="lmo1635" /note="Escherichia coli PhnB and similar proteins; Region: PhnB_like; cd06588" /db_xref="CDD:319899" misc_feature order(1680147..1680161,1680207..1680209,1680312..1680317, 1680324..1680326,1680372..1680389,1680393..1680395, 1680405..1680407,1680492..1680494,1680522..1680524) /locus_tag="lmo1635" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319899" regulatory 1680632..1680637 /regulatory_class="ribosome_binding_site" gene 1680644..1681564 /locus_tag="lmo1636" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985701" CDS 1680644..1681564 /locus_tag="lmo1636" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465161.1" /db_xref="GeneID:985701" /translation="MTETVLKLEHVTKKIGQKNIVHDISFDIHKGEVFGLLGPNGAGK TTIIRSIVGLIRRSEGTVFINGKNVDTEYKAAISEVGAIIENPEFYMYMSGWANLKQF ARMSQKNITDEHIREIVELVKLTGAINQKVKTYSLGMRQRLGVAQALIHSPALLILDE PTNGLDPQGMAEFRTLIRDLATNGTSVLISSHLLSEIQQITDRFAIINKGVLTHIEKM SDLIENHVAAYKLKVSDPVATTTVLATLPVKLVAQNEDLFKIEVAHEDVHLIARALIQ ANIDLLEMVPLQASLEERFLELTKSGGAEV" misc_feature 1680659..1681318 /locus_tag="lmo1636" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" regulatory 1681546..1681551 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1636" gene 1681561..1682628 /locus_tag="lmo1637" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985693" CDS 1681561..1682628 /locus_tag="lmo1637" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465162.1" /db_xref="GeneID:985693" /translation="MIALVKNEFTKLFSRKSSWIMQIVLFVAVLALALLMFFVSKIDT SGVEGGDASNAGITAYYDDKGAPVSEEEYWNSADKDGTPTYKSETLSLTDSVAYLKTQ EQAAPTKEAKETIQKQIDFYQAYVDADEKPASNSAGISSADFFASLGSSGAVATMLVV VVASIIVATEFSGGTIKLLLTRPYSRSQILFSKYVMCIVYSIISSITLLVASFIFSFI LPKQSIFMPLSPSTGAMTAFEHAWMLLGTNFLLMIVYATIAFFFSSVVRSQALAVGVG VGVLFSGGIIRQLLPLAIEKYDWMKWIIFNLLSLNDTVGGSKIAGGLADWQIIAGLGV YTAIILFFTFFLFKKRDVALS" misc_feature <1682068..1682403 /locus_tag="lmo1637" /note="ABC-type transport system involved in multi-copper enzyme maturation, permease component [Posttranslational modification, protein turnover, chaperones]; Region: NosY; COG1277" /db_xref="CDD:440888" regulatory 1682638..1682658 /regulatory_class="terminator" regulatory complement(1682638..1682658) /regulatory_class="terminator" gene complement(1682664..1683638) /locus_tag="lmo1638" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985696" CDS complement(1682664..1683638) /locus_tag="lmo1638" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465163.1" /db_xref="GeneID:985696" /translation="MIPAKLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVT FGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYDLISE NPKILCGFSDITALATAIYTQTELITYSGAHFSSFSMEKGLDYVMESFSDCLLQKEPF ALKESATWSDDEWYLDQENRNFIPNEGLVVMQPGVAEGIIIGGNLCTLNLLQGTEYMP NLAGTILFIEDDFMTIPETFDRDLESLLSQPGADEIEGMVIGRFQQKTAMTAEKLAYI IETKTALQKIPVISGADFGHTQPIATFPIGGTARIDTNQTDKIQIIRH" misc_feature complement(1682706..1683611) /locus_tag="lmo1638" /note="Microcin C7 self-immunity protein determines resistance to exogenous microcin C7; Region: Peptidase_S66_mccF_like; cd07062" /db_xref="CDD:132883" misc_feature complement(order(1682799..1682804,1682907..1682912, 1682919..1682924,1682928..1682933,1683000..1683005, 1683009..1683014,1683369..1683374)) /locus_tag="lmo1638" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:132883" misc_feature complement(order(1682751..1682753,1682955..1682957, 1683306..1683308)) /locus_tag="lmo1638" /note="catalytic triad [active]" /db_xref="CDD:132883" gene complement(1683635..1684216) /locus_tag="lmo1639" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985691" CDS complement(1683635..1684216) /locus_tag="lmo1639" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA-3-methyladenine glycosidase" /protein_id="NP_465164.1" /db_xref="GeneID:985691" /translation="MSEELRCPWSINDPFELEYHDTEWCVPSKDDTYLFEMLNLEGAQ AGLSWRLILHKRKAYQEAFFHFDIDKCALLTDDELATIVEEAAIVKNRLKVKAVRTNA LATQKVQAEFGSFANYIWGFTNNERIINKWQGMGQVPASTELSEKISKDLKKRGFKFV GPVIIYSYLQAIGILDDHLLSCPFHTLNREATK" misc_feature complement(1683647..1684216) /locus_tag="lmo1639" /note="3-methyladenine DNA glycosylase Tag [Replication, recombination and repair]; Region: Tag; COG2818" /db_xref="CDD:442066" regulatory complement(1683646..1683651) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1639" regulatory complement(1684225..1684230) /regulatory_class="ribosome_binding_site" gene complement(1684229..1684462) /locus_tag="lmo1640" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985692" CDS complement(1684229..1684462) /locus_tag="lmo1640" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1640" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465165.1" /db_xref="GeneID:985692" /translation="MRYQKISFIVTGIIAVVVGYLIFTSNYRPDVPNWLLFLFLALSI AVAVSQWREKRLIWSCIGLFVAILISVHYILTI" regulatory complement(1684472..1684477) /regulatory_class="ribosome_binding_site" regulatory complement(1684528..1684552) /regulatory_class="terminator" gene complement(1684563..1687265) /gene="citB" /locus_tag="lmo1641" /db_xref="GeneID:985689" CDS complement(1684563..1687265) /gene="citB" /locus_tag="lmo1641" /EC_number="4.2.1.3" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the conversion of citrate to isocitrate" /codon_start=1 /transl_table=11 /product="aconitate hydratase" /protein_id="NP_465166.1" /db_xref="GeneID:985689" /translation="MTNWKEKARASFQLNDKTYHYYKLKTLEEDKLTNIEKLPYSVRV LLESVLRQADGRVIKDSHVEDLAHWSKDGNEGEVPFKPARVILQDFTGVPAVVDLASL RKAMADLGGDPEKINPEIPVDLVVDHSVQVDSYANPEALKINMELEFKRNMERYQFLN WAQKAFDNYRAVPPATGIVHQVNLEYLANVVIANEVADGEFVAFPDSLVGTDSHTTMI NGIGVLGWGVGGIEAEAGMLGQPSYFPIPEVIGVKLLGALPNGATATDFALKVTQVLR EQKVVGKFVEFYGPGVATLPLADRATVANMAPEYGATCGFFPVDKEALNYLKLTGRDK EQIELVEAYLEANDLFFTPEKVEPNYTQTVEIDLSAIEPNLAGPKRPQDLIPLSKMKE TFRESITAKAGNQGFGLDKSALDKEVTVTFGNGDQSTMKTGSVAIAAITSCTNTSNPY VMLSAGLVAKKAVEKGLEVPKFVKTSLAPGSKVVTGYLEKAGLLPYLEKLGFDLVGYG CTTCIGNSGPLKEEIEEAIQDSDLLVSAVLSGNRNFEGRIHALVKANFLASPPLVVAY ALAGTTNVDMLTEPIGRGNNGEEVFLDDIWPSSEEVKALVEETVTPELFREQYAHVFD ENEAWNAIETTEDALYKWDENSTYIANPPFFDNLAKEAGKVEALSGLRIIGKFGDSVT TDHISPAGAIGKDTPAGKFLQEQGVAIRDFNSYGSRRGHHDVMMRGTFANIRIKNQIA PGTEGGYTTYWPTGEVMSIYDASRKYIENNTGLVILAGDDYGMGSSRDWAAKGTNLLG IKTVIAKSYERIHRSNLVMMGVLPLQFQPGEDAETLGLTGSESLQVEIGEDVAPRDLV KVTATREDGSSITFDALARFDSEVEIDYYRHGGILPMVLRGKLK" misc_feature complement(1684566..1687265) /gene="citB" /locus_tag="lmo1641" /note="aconitate hydratase AcnA; Region: PRK09277" /db_xref="CDD:236445" regulatory complement(1687274..1687279) /regulatory_class="ribosome_binding_site" regulatory complement(1687389..1687411) /regulatory_class="terminator" gene complement(1687420..1688223) /locus_tag="lmo1642" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985687" CDS complement(1687420..1688223) /locus_tag="lmo1642" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sigma factor regulator" /protein_id="NP_465167.1" /db_xref="GeneID:985687" /translation="MQIKEFLISRRSELVNMFYENYYSETDEFKLRLSSGEEEVSIRA LSTASCGMIIDVITGVKKRDFESIGKRRFNDKTDIRKIHQHMSEVEKYIITSLVKWKE TENVFYSDADIIQFMLAIKDTLSSIQQQLLEGFMQENRNQVAAQRKEIIQLSTRIIPI TDSIGVLPIVGSLDDDRGYFMKEKAVESADKLNLDTIVIDFSSAVLKDDFATKHMEDM IQSFKLIGLVPILSGMRPSFAQRTIQVGSNISKLESFGSLEQALTNLGV" misc_feature complement(1687438..1687764) /locus_tag="lmo1642" /note="Sulphate Transporter and Anti-Sigma factor antagonist domain of the 'stressosome' complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation; Region: STAS_RsbR_RsbS_like; cd07041" /db_xref="CDD:132912" regulatory complement(1688229..1688234) /regulatory_class="ribosome_binding_site" gene complement(1688248..1688670) /locus_tag="lmo1643" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985686" CDS complement(1688248..1688670) /locus_tag="lmo1643" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1643" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465168.1" /db_xref="GeneID:985686" /translation="MKKWEVFAVQNVEAAEEIINKLVSEGYEKEDISVLAKSKHNKNL ETLAEKENIEIERPVNEEAFGIISGILQSLSGAIVIPQAYNPKYGALYAAGPFAKWFS KTDDKSVKRLLEDFDLTEKQVDKMIENLHADNILIFAR" misc_feature complement(<1688458..1688646) /locus_tag="lmo1643" /note="Heat induced stress protein YflT domain; Region: YflT; cl46343" /db_xref="CDD:480683" gene complement(1688670..1691888) /locus_tag="lmo1644" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985681" CDS complement(1688670..1691888) /locus_tag="lmo1644" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="helicase SNF2" /protein_id="NP_465169.1" /db_xref="GeneID:985681" /translation="MEHFTAIQNKMIPYSVKQAGKKLMEDGEIIQFREKDAADHFLTY FIDQNVVEDAGNENYACSCADFQLNAICKHIYATHLKMEKEKQKAAKQDFKNRILTQE SNTLLSLFQQNMAQQLEVEEDNTNKTPLQTQYIIRLKPDDSSYIMTIEVKVGTERTYV VKNMNTFLAAIRDRQWLVFTKNFAYDPNEHFFLEEDKQILDKLLQISEIAKMYDTDSF YWSKSYAEEKNLTIPPSMASDLLELLTERDTTCIIMKERVEDIKYRGINVRHDNLDFI FELKKSADDKYQLEMEDLQQAIFFEAYQLLFFDGTFFIPAKEVWESLKPLMEFHKVTK NEVVQFSESQLSEVISYVLPALQKSGKLKLDDSIEDRITQQPLDCKLFIALEYGEHTL RLEYHYGNQLFDPFATSEEENEKIMIRDVEKEARVMNIIESAPVHFSGTKMVVNKQEK DLYQFYYRTIPKLAEYAEIYMEDGLEEMVEENVRPVTTLDVSGDNDYLSVSFDFKGIP EEEVQNVLESLREKRSYHRLKSGRFLSLESENYKQMEDVLQMLEVRKKDVQANMQVPL YRGMQIYDILGAGTQDEHHKFSRSFRELLTDITTQSEDSFALPKGLKAELRDYQLTGF EWMKSLAKYNLGGILADDMGLGKTVQTISFLASELEDNPNLKPVLIITPASLLYNWQS ELEKFAPAIPVTVLHGTKQSRMAEMEEMKRGHVYLISYPSLRQDIVHFADVAFSSVII DESQAIKNYHTKASQAVRALKRNHVFALSGTPLENSIDELWAIFQTLMPGFFPSLRKF KEIPYDNIAKMIRPFLLRRLKQDVVKELPDKIETNLYSELTDEQKTIYLAYLEKIQAD LEASNGNAGEERIKLLAGLTRLRQICCDPSLFVENYQGESGKLLQLFDTIQTARENGK RILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGENDIFLISLK AGGTGLNLVGADTVILYDLWWNPAVEEQATGRAHRIGQKRVVQVFRMITKGTIEERIF ELQKKKQALVDELIQPGEQMLGKLSTEEIKQILQLDNGRDDK" misc_feature complement(1690062..1691201) /locus_tag="lmo1644" /note="Bacterial SNF2 helicase associated; Region: SNF2_assoc; pfam08455" /db_xref="CDD:462483" misc_feature complement(1688754..1690475) /locus_tag="lmo1644" /note="Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination, and repair]; Region: HepA; COG0553" /db_xref="CDD:440319" regulatory complement(1688678..1688683) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1644" regulatory complement(1691898..1691903) /regulatory_class="ribosome_binding_site" gene complement(1691972..1695043) /locus_tag="lmo1645" /db_xref="GeneID:985688" CDS complement(1691972..1695043) /locus_tag="lmo1645" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP-dependent dsDNA exonuclease SbcC" /protein_id="NP_465170.1" /db_xref="GeneID:985688" /translation="MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTI FDAISFAIFGKANTFDRESFSMRSHFATDKEITEVTLAFRLKDKIYQISRIPQQEIAK QRGNGTTTSPQKAELYELIGDEMKLLASSVRDVNTKMEELIQLNVDQFRQILMIPQGE FRELLVSDSKEKEVILQRLAHTVYYEKVENLLWEKQKQAEILVVEARKKVAELAELSL PDVEVSGKTTSEISVLQDEAIQKEQVILTELENKLSIMRKQTSEAVEKVTLAKEQLLD WQNLDKYTEEVATLEAEKDFYQSMEVRMNAAKRASNLQSQDALCIRLKEQLEAAEQTE KQVVVEAEQVKTQFLHAKKQKEALAEKEAELEINKRTLFQLEEMEPKILELETVSIQK RRAELDWKETTTLLEKIIDKEQKIATELQSVEARLAEINKAELTYLEAINKRTTLEAR VEKEQELVNKRMKMEEWDAAKQTEEQTLAQLLIEKAEMERTIKQEEIKLEKEQAATIA AHLHEGDACPVCGSQSHPVLAKFGETADLETLEIAKAKLQEKQLVITTTEKAISQLEW QLNEWADMKEQSLAEIQQTLAGNIQLATNLREQITQLQSEVAQKETVQATLESLKNKQ NETLTEKNKMALEVEKLHQQVQLTEGKRTYLEQSIPDELRDKAVFDNKMKELSSKIET HIKQAEQIDALFRQAEKETTRLESTLHSAQKTTVDAKEALQVQREIFKEAMKQNDFLS YDAYKQALLSVDELKNLEGKLAEYEQKRHLAVSRQADLKEKLQNKQKPNMEQLEFIMK EKQLELSQSEENTMKQREFVAKRKELVENYQNSIQAVEQAEENYADIGLLADAARGKN ARRLTFERYILAMFLDTIIHRANHRLSKMTSGRFELQRKMEKAKGNVQSGLELEVFDE YTGLTRHVKTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFIDEGFGTLDPESLE AAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFITASS" misc_feature complement(1691993..1695043) /locus_tag="lmo1645" /note="exonuclease SbcC; Region: sbcc; TIGR00618" /db_xref="CDD:129705" gene complement(1695040..1696164) /locus_tag="lmo1646" /db_xref="GeneID:985682" CDS complement(1695040..1696164) /locus_tag="lmo1646" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="exonuclease SbcD" /protein_id="NP_465171.1" /db_xref="GeneID:985682" /translation="MKFLHTADLHLGKIVSGVSMLAEQEYILTQITQIAEEEQVDALI LAGDLYDRAVPPADAVKVLNDILVKWNVELGIPIFAISGNHDSAERLAFGSQWYESSK LYMKGKCTSQFDGIPFMDAEVWLVPYHEPAIIRQAFADNSIRSFEDAMQAVTKQIRSK WDTSKAQILVGHAFVSGGIPSDSERQLAIGNVDRVSTDCFDGFTYTALGHLHHPHAIR HPSIFYSGSPLKYSFSEANDHKSVRIVELEGKELISVTERFLTPKHDMRIISGTLAEL TENLVENPDDFFQVNLMDEGALIDPMGKLRQFYPNILHLERKKQTLKETQDSFEEIMK KDDLELFGQFFEHVNGTELTETQKQKLADVFEQARKEDAE" misc_feature complement(1695367..1696164) /locus_tag="lmo1646" /note="DNA repair exonuclease SbcCD nuclease subunit [Replication, recombination and repair]; Region: SbcD; COG0420" /db_xref="CDD:440189" misc_feature complement(1695118..1695381) /locus_tag="lmo1646" /note="Type 5 capsule protein repressor C-terminal domain; Region: SbcD_C; pfam12320" /db_xref="CDD:463533" regulatory complement(1695051..1695056) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1646" regulatory complement(1696171..1696176) /regulatory_class="ribosome_binding_site" regulatory 1696267..1696272 /regulatory_class="ribosome_binding_site" gene 1696280..1696888 /locus_tag="lmo1647" /db_xref="GeneID:985684" CDS 1696280..1696888 /locus_tag="lmo1647" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="1-acylglycerol-3-phosphate O-acyltransferase" /protein_id="NP_465172.1" /db_xref="GeneID:985684" /translation="MFYHFAKNLVHFILIIIGGRFQVQNKDKIIEAPYVVVSTHTSWI EILYLGFALSPTPVHYMAKQELFKGKFLNWLMTHLNAFPVNRDNPGPSAIKAPIRMLK SGKVVGIFPSGTRKTTNLHLKRGAVTIAHKAKVPMLPAVYDGPKTFGEILKRKKIIIR FGDPVLFNDTELDQKELLEVKSQELMATFEQLQNEINQTKNK" misc_feature 1696280..1696873 /locus_tag="lmo1647" /note="1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]; Region: PlsC; COG0204" /db_xref="CDD:439974" regulatory complement(1696893..1696916) /regulatory_class="terminator" regulatory 1696920..1696956 /regulatory_class="terminator" gene complement(1696940..1697302) /locus_tag="lmo1648" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985680" CDS complement(1696940..1697302) /locus_tag="lmo1648" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1648" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465173.1" /db_xref="GeneID:985680" /translation="MGAWGFDPWDSDEAADWFGEFMKHVDIDFIIQTVEEVENNEYDY ERIRAVSYIVEMLGKSYIWPVDYYEDLDKMVEKLINLLTLMIEPDSDFLDMWGNNPEI IIAVQKQIDVLKKRQQGK" misc_feature complement(1697000..1697299) /locus_tag="lmo1648" /note="Domain of unknown function (DUF4259); Region: DUF4259; pfam14078" /db_xref="CDD:433699" regulatory complement(1697312..1697317) /regulatory_class="ribosome_binding_site" gene complement(1697476..1697991) /locus_tag="lmo1649" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985678" CDS complement(1697476..1697991) /locus_tag="lmo1649" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1649" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465174.1" /db_xref="GeneID:985678" /translation="MKKWLLVVLTLALGLSLAACSGSNSSDKKEDTKKETTSDKDKVL NYYMDLVDVVNENNGDYNAYVGAVGADPKPSEADLAALAKPASESALKVSEALASEKT PDLGKSTDDFKAAVKQLSDAYKLEADALKASGRDTTKADEAMAKADEAIASVLKDAGL NPSSITTDTAS" misc_feature complement(<1697890..1697991) /locus_tag="lmo1649" /note="ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]; Region: NlpA; COG1464" /db_xref="CDD:441073" regulatory complement(1698000..1698005) /regulatory_class="ribosome_binding_site" gene complement(1698165..1698653) /locus_tag="lmo1650" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985591" CDS complement(1698165..1698653) /locus_tag="lmo1650" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465175.1" /db_xref="GeneID:985591" /translation="MSLIISIIITLVFGAGIIMIRMKASKRPASVKGIIIPPIMMSTG ALMFVIPFFRVSWVDILEAIAMGLVFSVILIWTTKFEIRHKYVFIKRTKAFPVILMGL LLIRIFIKYWISGSLEVGELSGMFWIMAFAMIVPWRIVMYFQYKNTEKELNKVEVSGE YE" misc_feature complement(1698183..1698653) /locus_tag="lmo1650" /note="Cytochrome c biogenesis protein CcdC [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]; Region: CcdC; COG4846" /db_xref="CDD:443874" regulatory complement(1698662..1698667) /regulatory_class="ribosome_binding_site" gene complement(1698734..1700539) /locus_tag="lmo1651" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985677" CDS complement(1698734..1700539) /locus_tag="lmo1651" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465176.1" /db_xref="GeneID:985677" /translation="MEAMNEQDEMLVMSGKEHREVLKRMLSYTKYHIPSLIWTGVLVL LVTLADVFAPILIKIFLDDYLTPMNLEMQALLILGAGYLGLTIGKSVVWYFQLLFFQK IALEIVQQMRIDIFTKLHSLGMRYFDKTPAGSIVSRVTNDTEAVKDMFINVLSTAIQS LFMLVGIYAAMFALNVQLALYSLLLFPLIVFIIFVYRKYSSQFYRARREKLSQLNAKI AESISGMSIVQQFNQERRLVKEFEKINKDYYDVGMKNIKFNALLLGPAIDLIYALAVV IILSFFGAESLIGPVAIGTIYAFISYFDRFLEAIYNVMERLAMYQEAITAASRVFRIM DETEEVPAQLNDPEAKITRAKIEFKDVSFAYEGGRDVLKNISFTAEPGQTVALVGHTG SGKSSIINLMMRFYEFERGDILIDGKSIKSHEITELRKKTGLVLQDSFMFYGDINTNI RLYDKSITDEQIVDAAKFVQADGFIQTLSDEYNHKVIERGASFSSGQRQLISFARTVV TNPQILVLDEATANIDTETESLIQTGLKRMREGRTTIAIAHRLSTIKDADLILVLSKG RIIERGTHDSLIAEEGVYHSMYQLQNSGMDLDEAL" misc_feature complement(1698758..1700503) /locus_tag="lmo1651" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:440747" gene complement(1700523..1702292) /locus_tag="lmo1652" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985675" CDS complement(1700523..1702292) /locus_tag="lmo1652" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465177.1" /db_xref="GeneID:985675" /translation="MKIYKALGWFFKENWKSYAFGVTILFTIALLQLVPPQIIGYTVD AVTNDSLTKDKLIKWMIILVVAAILAYGGRYVWRMLIFGSDNKLQRTLRLRLFEHFTK MSPFFFQRYRTGDLMAHATNDITAIQQVAGIGVLTLSDSVLTGGTVIATMAITIDWRL TLIALLPMPFMVLGSSILGKKLHDRFHGAQAAFSMLNDKTQESISGIKVTRTFGQEKE DIQDFAKQTKEVVQKNISVAKVDAMFDPMISIIVGVSFVLSLGFGAKFVVDGELTIGQ VIAFSNYLFLLIWPMLAFGFLYNIIQRGNASYDRVQHLLAEKEDVLDQEGALDTVPVG DLQVTMDKFTYPDESEPVLADIHFNLKAGETLGIVGRTGSGKTSLLKLLMREYDTYEG KIAFANVKIQDYTVRALREAIGYVPQDQFLFSTTVRDNIRFGKPDAPQEEVTKIAKLV SVDEDILGFENGYDTIVGERGVSLSGGQKQRLAIARALIMNPELLILDDALSAVDAKT EEQILANLKENRSDKTTIISAHRLSSVEHANLIIVIDKGRIVERGTHMELMALDGWYA EMFREQQLEEALEEGGVADGSDE" misc_feature complement(1700583..1702292) /locus_tag="lmo1652" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:440747" regulatory complement(1700548..1700553) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1652" regulatory complement(1702302..1702307) /regulatory_class="ribosome_binding_site" gene 1702373..1702553 /locus_tag="lmos62" /db_xref="GeneID:18245147" misc_RNA 1702373..1702553 /locus_tag="lmos62" /product="rli59" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245147" gene complement(1702695..1703315) /locus_tag="lmo1653" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985674" CDS complement(1702695..1703315) /locus_tag="lmo1653" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cellsurface protein" /protein_id="NP_465178.1" /db_xref="GeneID:985674" /translation="MKKTTMGIIASTISIIGIGCFLTVNTHAEKTKPEKKEVPTYAIH SDYTLDIDNPNEVVGDADYVFVGKVTQETGTDYKNETPIEQEDDSIKYIGEAYTNYKV EVISNLKNELAMDKEIVLQKQGGIREDGSAYDVFEDDQLPEVGNIYIFTAYTQDDGSL LVAGGNSTISFDEKTKKIDTEKEVSKTEEFELYEEAVENQVTPEEN" regulatory complement(1703324..1703329) /regulatory_class="ribosome_binding_site" gene complement(1703330..1703824) /locus_tag="lmo1654" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985673" CDS complement(1703330..1703824) /locus_tag="lmo1654" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell surface protein" /protein_id="NP_465179.1" /db_xref="GeneID:985673" /translation="MKKILSLLVAFVCLWSILLPGQEADAAAKINSWDLVDSSKHLDY SGNSKYMSFIQSGANTWNAYKKGVIRPASGANKSDVYCSDISANNNINATTYSNGKIT FNKKNMDKKNNAGKQNVATHELGHGLRLGHNASSDVMYQYSTSKTTLSTNDKQSYDAA YKKY" misc_feature complement(1703360..>1703470) /locus_tag="lmo1654" /note="Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which...; Region: ZnMc; cl00064" /db_xref="CDD:469599" misc_feature complement(order(1703429..1703431,1703447..1703449, 1703456..1703461)) /locus_tag="lmo1654" /note="active site" /db_xref="CDD:238124" regulatory complement(1703833..1703838) /regulatory_class="ribosome_binding_site" gene complement(1704618..1705181) /locus_tag="lmo1655" /db_xref="GeneID:985665" CDS complement(1704618..1705181) /locus_tag="lmo1655" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465180.1" /db_xref="GeneID:985665" /translation="MLRFSGLVMTIALIVYIVFFLLRWLKRREKLEMIIFKTCLYVYA CGVIKYAIFPLMLNAFLIEDTKIFVTGPYMNLIPFNSISEMFIAGRESAAFQIVANII MFVPLGMLLPLCYPKLRWKSVFAISFIATVGIELAQLLQDLIYQSPFKFVDIDDVILN FSGGIIGYMIFVMFRPLLRKMGLYPNV" misc_feature complement(1704672..1704959) /locus_tag="lmo1655" /note="Glycopeptide antibiotics resistance protein [Defense mechanisms]; Region: VanZ; COG4767" /db_xref="CDD:443799" regulatory complement(1705188..1705193) /regulatory_class="ribosome_binding_site" gene complement(1705199..1705630) /locus_tag="lmo1656" /db_xref="GeneID:985594" CDS complement(1705199..1705630) /locus_tag="lmo1656" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1656" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465181.1" /db_xref="GeneID:985594" /translation="MNRKMRLLKGLMAFIVGISIIATPIITVYAASNKVAISMNRRAV NGATNGKYHSLNKGTVKLNVSAKGFGNSNPNSTVTLHKEKFGIDDYFGRVSISSGKNY FYKNKTKEFPTKANAKSSKYYLKAEKAMDWYTVKIEGTISN" regulatory complement(1705638..1705643) /regulatory_class="ribosome_binding_site" regulatory complement(1706143..1706169) /regulatory_class="terminator" gene complement(1706204..1707088) /gene="tsf" /locus_tag="lmo1657" /db_xref="GeneID:985671" CDS complement(1706204..1707088) /gene="tsf" /locus_tag="lmo1657" /experiment="EXISTENCE:[PMID:19448609]" /note="EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu" /codon_start=1 /transl_table=11 /product="elongation factor Ts" /protein_id="NP_465182.1" /db_xref="GeneID:985671" /translation="MANITAQMVKELREKTGAGMMDCKKALVETEGDMEKAIDYLREK GIAKAAKKSDRVASEGMTHVISNEKHAVVLEVNAETDFVAKNDNFQQLVDALAKQILA VRPDSLEDALKTEMPNGQTVQDYITEAITKIGENISLRRFEVKEKADNSAFGEYIHMN GRIGVLTLLEGTTDTTVAKDVAMHIAAINPKYISREDVSSEEVAHEKEVLTQQALNEG KPANIVEKMVEGRLKKYLSEISLEDQPFVKNPDITVGEYVKQSGGKVVSFVRFEVGEG IEKKEDNFVEEVMSQVKK" misc_feature complement(1706207..1707085) /gene="tsf" /locus_tag="lmo1657" /note="Translation elongation factor EF-Ts [Translation, ribosomal structure and biogenesis]; Region: Tsf; COG0264" /db_xref="CDD:440034" regulatory complement(1707097..1707102) /regulatory_class="ribosome_binding_site" regulatory complement(1707121..1707146) /regulatory_class="terminator" gene complement(1707168..1707917) /gene="rpsB" /locus_tag="lmo1658" /db_xref="GeneID:985326" CDS complement(1707168..1707917) /gene="rpsB" /locus_tag="lmo1658" /experiment="EXISTENCE:[PMID:19448609]" /note="one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S2" /protein_id="NP_465183.1" /db_xref="GeneID:985326" /translation="MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQ KTVKKVDEAFNFMREVASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLT NFETIQKRIQHLKKIERMEADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDA LFIVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMA DAIIEVNQGEELTEAEVAPVEEKATEETTEA" misc_feature complement(1707216..1707917) /gene="rpsB" /locus_tag="lmo1658" /note="Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]; Region: RpsB; COG0052" /db_xref="CDD:439822" regulatory complement(1707927..1707932) /regulatory_class="ribosome_binding_site" regulatory 1708296..1708301 /regulatory_class="ribosome_binding_site" gene 1708312..1708518 /locus_tag="lmo1659" /db_xref="GeneID:985672" CDS 1708312..1708518 /locus_tag="lmo1659" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1659" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465184.1" /db_xref="GeneID:985672" /translation="MITYYFNNKADDKGRHEVHERTCRYLPENKTEIGVFSSCQDAIR QAKLQHFQKEFDGCFWCSRSCHKG" regulatory complement(1708827..1708847) /regulatory_class="terminator" gene complement(1708857..1711268) /gene="leuS" /locus_tag="lmo1660" /db_xref="GeneID:985669" CDS complement(1708857..1711268) /gene="leuS" /locus_tag="lmo1660" /EC_number="6.1.1.4" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="leucyl-tRNA synthetase" /protein_id="NP_465185.1" /db_xref="GeneID:985669" /translation="MTFNHKKMEPKWQQYWSEHNTFKTTEDKNKENFYALDMFPYPSG AGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQYAIDTGNDPEEFTAL NIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYENGLAYEAEIAVNWCPA LGTVLANEEVIDGKSERGGFPVFRKPMRQWMLKITAYADRLLDDLDLVDWPENIKDMQ RNWIGRSEGAEVTFKIKDSDETFNVFTTRPDTLFGATYTVFAPEHELIEKITTPEQKE AVEAYKKQVELKSELERTDLAKDKTGVFTGAYAINPINGEEVPIWIADYVLIQYGTGA IMAVPAHDERDFEFAQQFGLNIRPVLEGGDVTKEAFTGDGPHINSDFLNGLAKAEAIT AAIDWLEKEGIGSRKITYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEEELPLLLP KATEIKPSGTGESPLANLHDWVNVTDENGRKGRRETNTMPQWAGSSWYFLRYIDPKNS EAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQG MILGENNEKMSKSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARK FLDRIWRLLVTEEGTLAEKVTTDANANLEKAYHHMVKTVTNHYENLRFNTGISQLMIF INEAYKQDTIPKQYVEGFVQLLSPIAPHLAEELWEILGHTETISYVAWPTYDETKLVE DEVEIVLQVNGKVKSKITVAKSLGKEELEKIAQEDNKMKENLEGKTIRKVIVVPGKLV NIVAN" misc_feature complement(1708860..1711268) /gene="leuS" /locus_tag="lmo1660" /note="Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: LeuS; COG0495" /db_xref="CDD:440261" regulatory complement(1711278..1711283) /regulatory_class="ribosome_binding_site" gene 1711342..1711543 /locus_tag="lmos63" /db_xref="GeneID:18245148" misc_RNA 1711342..1711543 /locus_tag="lmos63" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245148" regulatory 1711657..1711662 /regulatory_class="ribosome_binding_site" gene 1711672..1712637 /locus_tag="lmo1661" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985668" CDS 1711672..1712637 /locus_tag="lmo1661" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465186.1" /db_xref="GeneID:985668" /translation="MKQTNPFVYSNDNKRYHTWNYCLREEFGQKTYKVALDGGFDCPN RDGTVAHGGCTFCSAAGSGDFAGNRALDLKIQFQQVRDKMQTKWKDGKCIAYFQAFTN THAPVAELREKFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQS AHDETGRLINRAHDYDCYVEGVRKLQKHNIRICTHIINGLPKETPEMMMETTRKVVES GVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIHRITGD GGVDDLIGPVWSLNKFEVLNAIDAELVRRDSWQGKLYQPVEVNAK" misc_feature 1711708..1712610 /locus_tag="lmo1661" /note="Radical SAM superfamily enzyme [General function prediction only]; Region: YhcC; COG1242" /db_xref="CDD:440855" regulatory 1712618..1712623 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1661" gene 1712634..1713209 /locus_tag="lmo1662" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985666" CDS 1712634..1713209 /locus_tag="lmo1662" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465187.1" /db_xref="GeneID:985666" /translation="MNLRGILPFAHDTLRKVVRSGDYVVDATCGNGHDTLLLAELVGI NGHVLGFDIQQLAIDATNTRLENAGVSSQVELVCASHARIPEYTSKPVRAAIFNLGYL PGGDKEITTTADSTLESIGHLMELLEVGGVIILVIYHGHPAGKQEKDAVMTFCEAIPQ QDFHVLSYNFINQKNDAPFVIIIEKRKPRQS" misc_feature 1712688..>1712846 /locus_tag="lmo1662" /note="Methyltransferase domain; Region: Methyltransf_31; pfam13847" /db_xref="CDD:463998" misc_feature order(1712712..1712732,1712787..1712792,1712868..1712876, 1712925..1712927) /locus_tag="lmo1662" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" misc_feature 1712775..1713185 /locus_tag="lmo1662" /note="Putative rRNA methylase; Region: rRNA_methylase; pfam06962" /db_xref="CDD:429214" regulatory 1713194..1713225 /regulatory_class="terminator" regulatory complement(1713195..1713226) /regulatory_class="terminator" gene complement(1713234..1715099) /gene="ansB" /locus_tag="lmo1663" /db_xref="GeneID:985663" CDS complement(1713234..1715099) /gene="ansB" /locus_tag="lmo1663" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="asparagine synthetase" /protein_id="NP_465188.1" /db_xref="GeneID:985663" /translation="MCGFVGCVHDRITEITGADKETFRQMNSMITHRGPDDEGYFTDD HVQFGFRRLSIIDVENGHQPLTYENERYWIIFNGEVYNYVELREQLVAEGMTFETESD TEVIIATYAKYKEKTAERLRGMFGFVIWDKQEELVYGARDPFGIKPFFYAEEDDKLFM GSEKKSILHALKEKELDEVSLQNYMTYQFVPEPDSLTKNVKRLEPGHQFTKKIGQPME ITTYWKASFAPVTKSEDAWIKEVRDVMYDSVKMHMRSDVPVGSFLSGGIDSSIIAAIA KEYHPAIKTFSVGFERDGFSEIDVAKETADKLGVENISYVISPEEYMKELPKIVWHMD DPLADPAAIPLYFLSREARKQVTVALSGEGADELFGGYNIYNEPNSLAMFNKMPGVFK SMLNNLARIMPEGMRGKSFLERGTTPMEERYIGNAKMFTEKEKQILLPKYQAGHDYTN ITDPFYAETTNYHPVERMQYIDIHTWLRGDILLKADRMTMANSLEVRVPFLDKEVYNV ARNIPDTMKTTNGTTKYILRKAAATFVPEHVLNRRKLGFPVPIRHWLKDEMNAWVKNI IKESPTDHLINKQYVLDLLDDHCAGKFDYSRKIWTVVIFMIWYDVYVADKYDFGK" misc_feature complement(1713264..1715099) /gene="ansB" /locus_tag="lmo1663" /note="Asparagine synthetase B (glutamine-hydrolyzing) [Amino acid transport and metabolism]; Region: AsnB; COG0367" /db_xref="CDD:440136" regulatory complement(1715109..1715114) /regulatory_class="ribosome_binding_site" regulatory complement(1715202..1715229) /regulatory_class="terminator" gene complement(1715236..1716435) /gene="metK" /locus_tag="lmo1664" /db_xref="GeneID:985664" CDS complement(1715236..1716435) /gene="metK" /locus_tag="lmo1664" /EC_number="2.5.1.6" /experiment="EXISTENCE:[PMID:19448609]" /note="methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine synthetase" /protein_id="NP_465189.1" /db_xref="GeneID:985664" /translation="MAKNRHLFTSESVSDGHPDKIADQISDAILDAIISKDPDARVAC ETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQS PDIAQGVDEALESRSGNEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLAR KLTELRKTNKLDYLRPDAKTQVTVEYDEFNQPVRIDTIVVSTQHHPDITQEQIAKDLH TYLFPEVIDASFLDEDTKYFINPTGRFVIGGPLGDAGLTGRKIIVDTYGGYARHGGGA FSGKDPTKVDRSGAYAARYVAKNIVAAGLAKKVEVQVAYAIGVARPVSISIDTYGTSD YSEQELIDGVNALFDLRPAGIIHMLDLRRPIYRQTAAFGHFGRSDLDLPWERTDKAEA LKKLIVK" misc_feature complement(1715245..1716423) /gene="metK" /locus_tag="lmo1664" /note="S-adenosylmethionine synthetase [Coenzyme transport and metabolism]; Region: MetK; COG0192" /db_xref="CDD:439962" regulatory complement(1716445..1716450) /regulatory_class="ribosome_binding_site" gene 1716543..1716651 /locus_tag="lmos64" /db_xref="GeneID:18245149" misc_RNA 1716543..1716651 /locus_tag="lmos64" /product="SAM" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245149" regulatory 1716844..1716849 /regulatory_class="ribosome_binding_site" gene 1716858..1717160 /locus_tag="lmo1665" /db_xref="GeneID:985662" CDS 1716858..1717160 /locus_tag="lmo1665" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1665" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465190.1" /db_xref="GeneID:985662" /translation="MSLIPLSLIIFLGFLAVLCLFDFVFRLYWFKYFLATMGLIASGV VFFISFYGGGMSQTEIAIAIFIGSFGEYVVSLIISLVRFISRKSKKPKQKKKAKTA" regulatory 1717164..1717187 /regulatory_class="terminator" regulatory complement(1717164..1717187) /regulatory_class="terminator" gene complement(1717193..1722328) /locus_tag="lmo1666" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985661" CDS complement(1717193..1722328) /locus_tag="lmo1666" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan-linked protein" /protein_id="NP_465191.1" /db_xref="GeneID:985661" /translation="MKSKFFIGMMTFLLSLICLTGMKAEAKSVGDISPDDISPEISDN RFQSAEGKVLPNFEVDMSISDQNNGKLSIDEDFELTSDGDIILIGTVQGQYIQGTPIL NENGQLNKIPNRDQGIIMRVDRTTKKVEWARVVNYEDGNYNSQYAADKWFSSYKSITT NSSKSTFYVGGEVVNYYGDSGGGSTLIVKSIDANGNFQIAHKSYVSYGVPSRSDLTYA YFMDIQMEGNTLTMSASARYAAQGKQFIRYTLEPASLSITKNEFNPLDNTFWAKYQRT DVLKVDNKGLMAYNADVNGANQLKMSIRESENNYKEITLFDSVPEILANSSPYIFMED RGDGNVFVVMSTPTTWYIALVNIASEQVVETKKMTMNSSTTLNSVIYSEGKGLLLGGS THAEESIFGSEPLNKNNGYYLALGNDLNVTDSQILRTNQHNSLTTIINGVGNKVDGFF SYDGLNNDGYIQNVEYPNTYDVNPNGAMIFAEFNLQPAPVLDTGNPILAFYQGERRAD FDELEGVKAYSGIDSSDVTKSITKNTFDLYTVGVQQQLYQIEYLPGSGNKTTGTRNVQ LIHPLETPKLEKSYADSHGAFKVGEVVPANAIHAFNGLDSANNVTYVVTAVDDEKITV DASIKRTEGTKTAVINKEITLMTSTADETAVIDVTSVALAAGKYTSLTDVRNEGHFHI YAETMDSVSIDPKYVKLTEDPENPVDWNAPGVYYVTASLDPASGYTAKDVKVSVAVVD VGSPKVISVNMKPYNPTTALVVAEDDINGAGVYKINWAIKDANGLIIQQGVEESGATI RVQTPVPIDLSTLNDGNYTLSVSAADRIGHTSEASEKAFTVDRQAPVVTADDKITYEI NTKKTEEEFLNDVNVKTEAGAVIKTNFDTMVRMDSPGDYTVLVEATDAAGNQSDPIYV IVTVEDTVAPIISADEAISYNQGNIRTEALFLTDIHATTDEPATITSDFADQVKFDTP GVYAVTLKANDISGNQAIPRTVNVTIKDVTAPVITADEAIIYEKGITKSATDFLTDIH ATTNDGSAITSNFATVVDLNTPGDYDVTLSSTDTGGNISDPVTITVTVRDTTPPVITA DTTITYEKGTTKTAAAFLTDVNATTNDGSAVTSNFNPISLKQVGTYQVTLSSVDENGN YALPVKVTVVVQDTQKPVISSSATSITYERGEKKQETGFFLDLAIKTDDGTPVTSDFD TAVNLDTAGTYTVTLNSEDESGNKADPVTITVTVADTEKPIITADTTITYAKGTTKTV AQFLTDIHATTNDGSTIISNFDPTVLAQEGTYTVVLNAKDESNNEADPVTVTITVVDT KGPIINALNAITYERTINKNEADFLADIEATTDDGSTITTDFNSKDLDTVGTYIVTLN AEDASGNKATPVKVTIKVEDTIPPIITADQSITYERGITKTEQAFYTDIKAATSDNSP ISSDFSKIDLTKTGNYEVLLRATDQSGNKALPLKINVLVQDTIAPVIKTTSREITAER GTPMTEQQLLAKIGANTDDGSKITTDYNPAIVNTSGDYLVHLYAVDAAGNQAIPVEIT IHVKDTTAPIIKADKKISYPVGTVKTVTEFLQDIHATTDDGSKITTDFDPNMLKTPGK YTIHLNAVDADGNKAKTIDVSLTVEEKVTPPKPPTPDDGGNNTNGSNGTNGSNTDITV NPTKQNTTATNESIPALGDTKSTIPVIVGMFLLATSLVLIRRK" misc_feature complement(1719575..1719799) /locus_tag="lmo1666" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature complement(1719335..1719559) /locus_tag="lmo1666" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature complement(1719095..1719319) /locus_tag="lmo1666" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature complement(1718858..1719079) /locus_tag="lmo1666" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature complement(1718615..1718842) /locus_tag="lmo1666" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature complement(1718399..1718599) /locus_tag="lmo1666" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature complement(1718141..1718362) /locus_tag="lmo1666" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature complement(1717904..1718125) /locus_tag="lmo1666" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature complement(1717664..1717888) /locus_tag="lmo1666" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" misc_feature complement(1717427..1717648) /locus_tag="lmo1666" /note="Internalin K domain (D3/D4); Region: InlK_D3; pfam18981" /db_xref="CDD:408751" gene complement(1722431..1723339) /locus_tag="lmo1667" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985660" CDS complement(1722431..1723339) /locus_tag="lmo1667" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="L-lactate dehydrogenase" /protein_id="NP_465192.1" /db_xref="GeneID:985660" /translation="MKRKVGIIGTGHVGSDVAFSLVTQGICDEIVLIDKIETKAESEA LELRDMASMTNSYTMITSNDWSALGDADVIVMAVGPETLLREDRMEELVETSRSVAEI VPKIIASGFQGIFVNITNPCDVITMLIQKLSGFDHSRVFGTGTSLDTARMRRVVGEAL HINPKSVEGYVLGEHGESQFVAWSTVKIGGVSIKDYKTTTSLDLPALKDAVRGGGWNI LTGKGWTSFGIATAVAGIVDAILTDAKQVFPLAVFSEKTSTYIGQPALIGANGVIDIL EPPLTETEKINFNESAEIIKNAFQLI" misc_feature complement(1722440..1723333) /locus_tag="lmo1667" /note="L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases; Region: HicDH_like; cd05291" /db_xref="CDD:133427" misc_feature complement(order(1722506..1722511,1722533..1722535, 1722599..1722601,1722605..1722619,1722767..1722772, 1722785..1722787,1722842..1722844,1722851..1722853, 1722857..1722859,1723169..1723171,1723256..1723258, 1723331..1723333)) /locus_tag="lmo1667" /note="tetramer (dimer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:133427" misc_feature complement(order(1722815..1722817,1722911..1722913, 1722980..1722988,1723100..1723111,1723235..1723240, 1723301..1723309)) /locus_tag="lmo1667" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:133427" misc_feature complement(order(1722635..1722637,1722647..1722649, 1722656..1722664,1722674..1722679,1722845..1722847, 1722881..1722883,1722887..1722892,1723181..1723186, 1723193..1723207,1723211..1723213,1723268..1723273, 1723283..1723285,1723292..1723297)) /locus_tag="lmo1667" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133427" misc_feature complement(order(1722665..1722667,1722695..1722697, 1722815..1722817,1722887..1722889,1722980..1722982, 1723076..1723078)) /locus_tag="lmo1667" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133427" regulatory complement(1723347..1723352) /regulatory_class="ribosome_binding_site" gene complement(1723356..1723598) /locus_tag="lmo1668" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985659" CDS complement(1723356..1723598) /locus_tag="lmo1668" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465193.1" /db_xref="GeneID:985659" /translation="MGMPLEVNTMIVTKGKEKRISDNFFELEKLGYRIYPIDVPIAVR KTKEGETLGEAIPRKLVWENNKTIIKYELIALNSSN" misc_feature complement(1723368..1723595) /locus_tag="lmo1668" /note="Protein of unknown function (DUF2584); Region: DUF2584; pfam10763" /db_xref="CDD:402408" regulatory complement(1723607..1723612) /regulatory_class="ribosome_binding_site" gene complement(1723649..1724122) /locus_tag="lmo1669" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985657" CDS complement(1723649..1724122) /locus_tag="lmo1669" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465194.1" /db_xref="GeneID:985657" /translation="MFIYIDTLGNKVTIYFEAQENNPDDVLIIPKTKDGWLFTEHKIR GLEFPGGKGEPGETNLDAAKRELMEETGAISAELHFVADYLVESEERTFTKRVYAAHV ISIESLDDYLETKGPVIIQGELSQFILQPAFSFFMRDAGMIQIVQQAEHILNDKN" misc_feature complement(1723658..1724119) /locus_tag="lmo1669" /note="nucleoside triphosphatase YtkD; Region: nudix_YtkD; TIGR02705" /db_xref="CDD:131752" regulatory complement(1724130..1724135) /regulatory_class="ribosome_binding_site" regulatory 1724180..1724185 /regulatory_class="ribosome_binding_site" gene 1724196..1724462 /locus_tag="lmo1670" /db_xref="GeneID:985658" CDS 1724196..1724462 /locus_tag="lmo1670" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465195.1" /db_xref="GeneID:985658" /translation="MKKILIGGIRLYQKYISRFTPATCRFYPTCSAYGIEAIQTHGAL KGSYLAIRRISKCHPFHKGGLDFVPPKKDKNADSEHSCKVHHHH" misc_feature 1724199..1724399 /locus_tag="lmo1670" /note="Putative membrane protein insertion efficiency factor; Region: YidD; pfam01809" /db_xref="CDD:460342" regulatory 1724471..1724492 /regulatory_class="terminator" regulatory 1724596..1724601 /regulatory_class="ribosome_binding_site" gene 1724612..1725565 /locus_tag="lmo1671" /db_xref="GeneID:985656" CDS 1724612..1725565 /locus_tag="lmo1671" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_465196.1" /db_xref="GeneID:985656" /translation="MRKRYLIALTTLFSVLLILTGCSDESDTKATSSDQLTVYTTVYP LQYLTEQIGGKYVDVHSIYPPGSDAHSFEPTQKDMMKIADSDLFFYIGLGMEGFVDKA KKTLANEHVTFVPTAEKLDLPKDPDAAEEHDHESEEEHEHGDINPHVWLNPVYMEQMA TVVKDKLIKEMPNQKETFEKNYQAVEEKLKNLDQDFRTVTSEAKQKDFVTAHAAYSYW ETEYGLHQIPIAGVSTSDEPSQKKLKSIVEKIEAEKIPYIMLEQNTNSKIADVIQQET NTKTLTLHNLETLTQKDIEQKRDYFSIMNDNLKALKEGLNY" misc_feature 1724708..1725559 /locus_tag="lmo1671" /note="Metal binding protein AdcA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AdcA proteins belong to the TroA superfamily of helical backbone metal receptor...; Region: AdcA; cd01017" /db_xref="CDD:238499" misc_feature order(1724819..1724821,1725053..1725055,1725245..1725247, 1725470..1725472) /locus_tag="lmo1671" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238499" regulatory 1725574..1725597 /regulatory_class="terminator" gene complement(1725584..1726993) /gene="menE" /locus_tag="lmo1672" /db_xref="GeneID:985655" CDS complement(1725584..1726993) /gene="menE" /locus_tag="lmo1672" /EC_number="6.2.1.26" /experiment="EXISTENCE:[PMID:19448609]" /note="converts O-succinylbenzoate to O-succinylbenzoyl-CoA" /codon_start=1 /transl_table=11 /product="O-succinylbenzoic acid--CoA ligase" /protein_id="NP_465197.1" /db_xref="GeneID:985655" /translation="MDMTNWLQKRVRLSPKETALVFEGKEETFEEISEAVERLAGKLF ALGIRKDEMIALLGKNDRMTFLLIHALQQLGAVTLFLNNRLTKKEIAYQLANAEVKQV IVADTFEDKVGAGISYSELAETDYKEPELLETWDLSRTASIMYTSGTTGKPKGVIQTY ENHWWSAVASVLNLGLTEKDSWLCAVPIFHISGLSIMMRSVIYGIPVYLEEHFDEEKI TQLLESGKVSTISVVTSMLERLLKIHGGSYHPNVRTILLGGGPASKTVLEICKQRDIP LVQSFGMTETASQIVTLPPKDALNKIGSSGKALFPAEVKIADDGEILLKGPSITPGYL HNKKATEASFVDGWFKTGDIGYLDEEGFLFVVERRSDLIISGGENIYPTEIEHVIGEY VAVKEVAVIGQPDDKWGSVPVAFIVAEETFDEDELQLICQTNLASYKIPKQIIIVEKL PKTASGKIQRNKLKERHSK" misc_feature complement(1725587..1726993) /gene="menE" /locus_tag="lmo1672" /note="o-succinylbenzoate--CoA ligase; Region: PRK03640" /db_xref="CDD:235146" regulatory complement(1726933..1726966) /regulatory_class="terminator" /gene="menE" /locus_tag="lmo1672" regulatory complement(1727001..1727006) /regulatory_class="ribosome_binding_site" gene complement(1727009..1727827) /gene="menB" /locus_tag="lmo1673" /db_xref="GeneID:985651" CDS complement(1727009..1727827) /gene="menB" /locus_tag="lmo1673" /EC_number="4.1.3.36" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA" /codon_start=1 /transl_table=11 /product="naphthoate synthase" /protein_id="NP_465198.1" /db_xref="GeneID:985651" /translation="MSFNWQTEKVYEEIKYESYEGIAKITINRPEVHNAFTPKTVTEM IDAFNLARDNSNLGVIILTGEGEKAFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLI RVIPKPVIAMVAGWSIGGGNVLQLVCDLTIAADNAKFGQTGPNVGSFDAGYGSGYLAR VIGHKKAKEVWFMCRQYTADEALEMGWINTVVPVADLEKETVAWAKEMLQKSPTALRF IKAAFNADTDGLAGIQQLAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP" misc_feature complement(1727012..1727827) /gene="menB" /locus_tag="lmo1673" /note="dihydroxynaphthoic acid synthetase; Validated; Region: PRK07396" /db_xref="CDD:180958" misc_feature complement(order(1727390..1727392,1727399..1727404, 1727468..1727476,1727480..1727482,1727600..1727614, 1727624..1727626,1727723..1727725,1727729..1727731)) /gene="menB" /locus_tag="lmo1673" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature complement(order(1727468..1727470,1727606..1727608)) /gene="menB" /locus_tag="lmo1673" /note="oxyanion hole (OAH) forming residues [active]" /db_xref="CDD:119339" misc_feature complement(order(1727204..1727209,1727216..1727218, 1727261..1727263,1727270..1727272,1727303..1727305, 1727312..1727317,1727321..1727326,1727330..1727335, 1727348..1727353,1727357..1727365,1727369..1727371, 1727387..1727398,1727432..1727443,1727504..1727506, 1727528..1727530)) /gene="menB" /locus_tag="lmo1673" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" gene complement(1727824..1728651) /locus_tag="lmo1674" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985652" CDS complement(1727824..1728651) /locus_tag="lmo1674" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="prolyl aminopetidase" /protein_id="NP_465199.1" /db_xref="GeneID:985652" /translation="MLVNGQHYHLTAAISGEKPALLMLHGFTGTSETFQDSISGLKKR FNIIAPDLLGHGNTASPEEISSYTMENICEDLAGILHQLNVSRCFVLGYSMGGRVATA FAATFPKRVRGLILVSSSPGLEQEDIRASRVEADNRLADWIEEEGLVPFVDYWENLAL FASQKVLSPEMKRRIRSERLSQNSHGLAMSLRGMGTGKQPSYWNCLANFTFPVLLITG ALDEKFEKIAQEMHQLLPNSTHVSIQEAGHAVYLEQPNSFSSQLNYWLEDILKEEEK" misc_feature complement(1727851..1728603) /locus_tag="lmo1674" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Region: menH_SHCHC; TIGR03695" /db_xref="CDD:274729" regulatory complement(1727835..1727840) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1674" gene complement(1728653..1730395) /gene="menD" /locus_tag="lmo1675" /db_xref="GeneID:985654" CDS complement(1728653..1730395) /gene="menD" /locus_tag="lmo1675" /EC_number="4.1.1.71" /experiment="EXISTENCE:[PMID:19448609]" /note="SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis" /codon_start=1 /transl_table=11 /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase" /protein_id="NP_465200.1" /db_xref="GeneID:985654" /translation="MTNHEQVLTDYLAAFIEELVQAGVKEAIISPGSRSTPLALMMAE HPILKIYVDVDERSAGFFALGLAKASKRPVVLLCTSGTAAANYFPAVAEANLSQIPLI VLTADRPHELRNVGAPQAMDQLHLYGSHVKDFTDMALPENSEEMLRYAKWHGSRAVDI AMKTPRGPVHLNFPLREPLVPILEPSPFTATGKKHHHVHIYYTHEVLDDSSIQKMVTE CTGKKGVFVVGPIDKKELEQPMVDLAKKLGWPILADPLSGLRSYGALDEVVIDQYDAF LKEAEIMDKLTPEVVIRFGSMPVSKPLKNWLEQLSDIRFYVVDPGAAWKDPIKAVTDM IHCDERFLLDIMQQNMPDDAKDAAWLSRWTSYNKVAREIVLAEMANTTILEEGKIVAE LRRLLPEKAGLFIGNSMPIRDVDTYFSQIDKKIKMLANRGANGIDGVVSSALGASVVF QPMFLLIGDLSFYHDMNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQANEPKYFESLF GTSTELDFRFAAAFYDADYHETQSVDELEEAIDKASYHKGLDIIEVKTNRHENKANHQ ALWAKIADALKALN" misc_feature complement(1728668..1730389) /gene="menD" /locus_tag="lmo1675" /note="2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase [Coenzyme transport and metabolism]; Region: MenD; COG1165" /db_xref="CDD:440779" regulatory complement(1728664..1728669) /regulatory_class="ribosome_binding_site" /gene="menD" /locus_tag="lmo1675" gene complement(1730392..1731780) /gene="menF" /locus_tag="lmo1676" /db_xref="GeneID:985649" CDS complement(1730392..1731780) /gene="menF" /locus_tag="lmo1676" /experiment="EXISTENCE:[PMID:19448609]" /note="synthesizes isochorismate acid from chorismate" /codon_start=1 /transl_table=11 /product="menaquinone-specific isochorismate synthase" /protein_id="NP_465201.1" /db_xref="GeneID:985649" /translation="MNTKLPLDLFNQAKRSASQDQPALFSWVTELDELVSPVKLFKKA GTAFKGERFFWQNPEMTLTMTGFGVTKQFLAEKKKDAFLGLQEKIEKRLRTSVTNATV DATGPVYFGGFAFDPERDTEKEWQSFKDGLFYLPLFMLTNKDGKSYLTVNLSIYSDDT ESKLEAVFNQWQKIIHQEVNEAEMALLTDFKEIGKDHFLETASEIIDMINHSEDVKKV VLARRMGLRFQRQVDSAIILENMLATQENSYFFLIEKGTGVFFGATPERLLAVNGDEI HSSCVAGSTERGATEEADEALGNALLKDAKNLREHSYVVQMMEETLKPFTTGLSLSSQ PVLLKNRDIQHLYMNITAKKKPDVSMLEMVKALHPTPALGGLPQKMGLAIIRMKEEMD RGFYGAPIGWVDLKGSGEFAVAIRSGLIVDSQGLIYAGCGIVGDSVPKEELQETAVKF QPMLRVLGGIKK" misc_feature complement(1730404..1731630) /gene="menF" /locus_tag="lmo1676" /note="Isochorismate synthase EntC [Coenzyme transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]; Region: MenF; COG1169" /db_xref="CDD:440783" regulatory complement(1730405..1730410) /regulatory_class="ribosome_binding_site" /gene="menF" /locus_tag="lmo1676" regulatory complement(1731790..1731795) /regulatory_class="ribosome_binding_site" regulatory 1731942..1731947 /regulatory_class="ribosome_binding_site" gene 1731955..1732893 /locus_tag="lmo1677" /db_xref="GeneID:985647" CDS 1731955..1732893 /locus_tag="lmo1677" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate" /codon_start=1 /transl_table=11 /product="1,4-dihydroxy-2-naphthoate octaprenyltransferase" /protein_id="NP_465202.1" /db_xref="GeneID:985647" /translation="MANASKSALTKQTGFQKWWTLLRPHTLVASFVPVFLGTSVAMSY TSFHFTRFIVMLIACFFIQTSANLFNEYFDYKKGQDDEHSVGNGGAIVRNGMRPGFIL FLAIFLYILSILGGVYLSIELNWYVGLLGAICMLVGFLYTGGPYPIAYTPFGEIMAGF FMGGIITFISFYIQAEFISSFIVYVSIPVMVLVGNLLLANSIRDLVPDKKNGRLTLAI LLGRKWATVLFAAAFLFSYVFEIALIFTQDAPWWTLLILLSLPEAIRAVRRFIGKTSP ITMVPAMKSTSKALTIFGITLALAYLLSLLSRNLFM" misc_feature 1731997..1732842 /locus_tag="lmo1677" /note="1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated; Region: PRK06080" /db_xref="CDD:235695" regulatory 1732899..1732921 /regulatory_class="terminator" regulatory complement(1732899..1732921) /regulatory_class="terminator" gene complement(1732926..1734779) /locus_tag="lmo1678" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985643" CDS complement(1732926..1734779) /locus_tag="lmo1678" /EC_number="2.1.1.10" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase" /protein_id="NP_465203.1" /db_xref="GeneID:985643" /translation="MNLRKDLSEKVLIADGAMGTLLYSYGVDRSFEELNLSHPEDIVA IHKAYIGAGADIIQTNTYGANYIKLARYGLEDEVKRINQAAIRLAKEAARGTGTYIFG TIGGINGAVDARLPAAPLEEIKRSFREQLYCFLLDGVDAILLETYYDLDELKTVLKIL RETTDLPVVANVSMHEPGILQNGKKLPDALEELIALGADVVGINCRLGPYHMARALET VPLYDNAYLAVYPNASLPEMQEGKVIYQSDTDYFEHYGEVFRQEGARIIGGCCGTTPD HIRALRKGLETTKPILEKEVRPILELVPEEVEDVDSGERLLDKVKERLTILVELDPPR TFDTTKFFEGAQALDEAGVDAITISDNSLATPRISNMALASILKHEYGIKPLIHLTTR DHNLVGMHSHVMGFHKLGLHDVLAITGDPTKVGDFPGASSVFDLRSVELVQLIKKFND GISYTGKSLKEKARFHVGAAFNPNVLNLEKAVRLIERKVEYGADYIITQPIYDVNKAI LLKEALQKANIDVPLFIGVMPLLSSRNAEFLHNEVPGIRLTDDVRERMREAEEHGHAN EEGMAIARELVDAICEHFQGIYIITPFLRYDLSIELAKYAQNKQQVQIGSK" misc_feature complement(1732935..1734779) /locus_tag="lmo1678" /note="bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; Reviewed; Region: PRK08645" /db_xref="CDD:236321" gene complement(1734776..1735948) /locus_tag="lmo1679" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985644" CDS complement(1734776..1735948) /locus_tag="lmo1679" /EC_number="4.4.1.8" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of L-homocysteine from cystathionine" /codon_start=1 /transl_table=11 /product="cystathionine beta-lyase" /protein_id="NP_465204.1" /db_xref="GeneID:985644" /translation="MAKEYAQDTAVIKASLGIDKETGALNTPIHLSSTFHQHDFDNYH AYDYARSGNPTREKVEQAIAELEGGTNGFAFASGMAAVSAALFTLSKGDHFIIAKDVY GGTFRLVEQVLPRFGITHTFVDTTNIDEVAKAFQANTKLVYLETPSNPLLHVTDIRTV AKLAKANGCYTFVDNTFLTPLIQKPLELGADLVIHSATKFLGGHSDILAGLIVTNNPN LAEAVYFLQNSTGGVLGVQDSWLLLRGLKTLSVRMKAGTETAEKIALFLNAEPDVVAV HYPGLPSHAGYDIQVEQATSGGAVLSFDLGSEEAVRELVTHLELPVFSVSLGAVESIL SYPAKMSHAAVPEEERLAQGITPGLLRFSAGLEDAEDLIADLKQALSFIKKGSVAK" misc_feature complement(1734779..1735948) /locus_tag="lmo1679" /note="cystathionine beta-lyase MetC; Region: PRK08064" /db_xref="CDD:236146" misc_feature complement(order(1735001..1735003,1735235..1735240, 1735244..1735246,1735274..1735276,1735325..1735327, 1735331..1735333,1735355..1735357,1735619..1735621, 1735628..1735630,1735643..1735645,1735709..1735714, 1735718..1735723,1735799..1735801,1735805..1735807, 1735838..1735843,1735847..1735858)) /locus_tag="lmo1679" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99738" misc_feature complement(order(1735325..1735327,1735352..1735357, 1735361..1735363,1735427..1735429,1735514..1735516, 1735643..1735645,1735712..1735720)) /locus_tag="lmo1679" /note="substrate-cofactor binding pocket [active]" /db_xref="CDD:99738" misc_feature complement(order(1735352..1735357,1735361..1735363, 1735418..1735420,1735427..1735429,1735643..1735645, 1735712..1735720)) /locus_tag="lmo1679" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99738" misc_feature complement(1735352..1735354) /locus_tag="lmo1679" /note="catalytic residue [active]" /db_xref="CDD:99738" regulatory complement(1734789..1734794) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1679" gene complement(1735941..1737065) /locus_tag="lmo1680" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985641" CDS complement(1735941..1737065) /locus_tag="lmo1680" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cystathionine gamma-synthase" /protein_id="NP_465205.1" /db_xref="GeneID:985641" /translation="MAKLKQETIAAQIGNRKCERTGAVNMPVYFSTAYQHADLGVSTG YDYTRTGNPTRDALQEALAELENGTHAFATSSGMSAIQLVFQLFKTGEHIISSQDLYG GTFRYFEQFGAQYQIGFSYWDGAEIADLEKLIRPETKAIFIETPTNPLMQETDIATVA KWAHAHDLLVIVDNTFYTPVLQQPLSLGADIVIHSATKYLGGHNDVLAGAVIVKEEKL GKFFFDQLNATGTVLSPFDSWLLIRGLKTLVLRVRQHQANAQKIAAFLEEHKLVEEVR YPGRGGMISFFIRDAALVSPLLKELELFTFAESLGGVESLITYPTTQTHADIPVELRN SYGLTDKLLRISVGIEASEDLIADLSKALDAVLEEVSARG" misc_feature complement(1735968..1737047) /locus_tag="lmo1680" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl18945" /db_xref="CDD:450240" misc_feature complement(order(1736169..1736171,1736355..1736360, 1736364..1736366,1736394..1736396,1736445..1736447, 1736451..1736453,1736475..1736477,1736739..1736741, 1736748..1736750,1736763..1736765,1736829..1736834, 1736838..1736843,1736919..1736921,1736925..1736927, 1736967..1736978)) /locus_tag="lmo1680" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99738" misc_feature complement(order(1736445..1736447,1736472..1736477, 1736481..1736483,1736547..1736549,1736634..1736636, 1736763..1736765,1736832..1736840)) /locus_tag="lmo1680" /note="substrate-cofactor binding pocket [active]" /db_xref="CDD:99738" misc_feature complement(order(1736472..1736477,1736481..1736483, 1736538..1736540,1736547..1736549,1736763..1736765, 1736832..1736840)) /locus_tag="lmo1680" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99738" misc_feature complement(1736472..1736474) /locus_tag="lmo1680" /note="catalytic residue [active]" /db_xref="CDD:99738" regulatory complement(1735958..1735963) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1680" regulatory complement(1737076..1737081) /regulatory_class="ribosome_binding_site" gene complement(1737087..1739384) /locus_tag="lmo1681" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985640" CDS complement(1737087..1739384) /locus_tag="lmo1681" /EC_number="2.1.1.14" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine" /codon_start=1 /transl_table=11 /product="5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase" /protein_id="NP_465206.1" /db_xref="GeneID:985640" /translation="MVKAISSNLGYPRLGEKREWKRALEKFWNGAISEEELLAETKAL RLHALKKQQEKGIDLIPVGDFSFYDQVLDTSVTFGIIPKRFQHDGGKVSLNTYFDIAR GKSDAVASEMTKWFNTNYHYIVPELADADPKVLDNRALYYYEEAKKELGIEGKPVLVG PVTYLKLGKGNDAENFEALLDKFIPAYVEILKELERAGAKWVQIDEPYLATSFDKSEI KLFEKVYQAFQTAVPNLKIELQTYFESLDYYEEVVNLPVAAIGIDFVHDHGDSLEALK AHGFPEDKYLAAGVIDGRNVWRSDLDAKLSLLTEIADYVTDGKLIVQPSNSLLHVPVT KLSEPDLDEVILGGLSFADQKLDEIAILTKALTDGAESVTAELEDARAAVTALNESSH RNNLEVQEAIANLGNVRVDRELPFAERIKLQHAWLNLPLFPTTTIGSFPQSPEVRKTR ADWLKGNITDAEYNAFIEKETARWIKIQEELDIDVLVHGEFERTDMVEYFGQKLAGFQ ATKFGWVQSYGSRAVRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIIN WSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWEKYL NDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIIST FEEVTYDKEIGLGVYDIHSPRVPTVTEIQDNIRRALRAIDAKQFWINPDCGLKTRKEP ETIAALQDMIKATKEVRAEYQVLEK" misc_feature complement(1737099..1739375) /locus_tag="lmo1681" /note="5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional; Region: PRK05222" /db_xref="CDD:235367" regulatory complement(1739390..1739395) /regulatory_class="ribosome_binding_site" gene 1739491..1739597 /locus_tag="lmos65" /db_xref="GeneID:18245150" misc_RNA 1739491..1739597 /locus_tag="lmos65" /product="SAM" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245150" gene complement(1739674..1740849) /locus_tag="lmo1682" /db_xref="GeneID:985646" CDS complement(1739674..1740849) /locus_tag="lmo1682" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_465207.1" /db_xref="GeneID:985646" /translation="MGAKGKFWILTMVVAISGLSQGVLLPLIAIILEERGISAGINGF HATGIYLGVLLISPFIEAPLHKYGYKPIILVGGGLVAVSILAFPIWFNLYFWFILRLL IGVGDHMLHFSSQTWIGAMSDPSKRGRNMAIYGLFFSLGFAIGPQLVNLAEINANLPF FLSGILVLIAWGLVWFVRNDFVGEKAVIRKISFWGSLKRFSDVFKLAWVAMIPPFLYG ILETGLNATFPVVGLRDGLDTMMIAMVISSFSVGTIIFQVPIGIVSDKFGRGKVLPLL TGAGAVVFVLTAFVKIPVLYVVFFFVLGILLGSLYSLGLSYMTDLTPLELLPAGNILV GMCFSLGSIIGPSATGMMIGIFGNQIFYFVVAGILVLGCLLLIFGARKDALEKKMKN" misc_feature complement(1739722..1740810) /locus_tag="lmo1682" /note="YcaD and similar transporters of the Major Facilitator Superfamily; Region: MFS_YcaD_like; cd17477" /db_xref="CDD:341030" misc_feature complement(order(1739824..1739826,1739833..1739838, 1739845..1739850,1739857..1739859,1739905..1739907, 1739917..1739919,1739929..1739934,1740079..1740081, 1740091..1740093,1740163..1740165,1740172..1740180, 1740187..1740192,1740199..1740201,1740424..1740426, 1740433..1740438,1740445..1740447,1740505..1740507, 1740514..1740522,1740526..1740531,1740679..1740681, 1740775..1740777,1740784..1740789,1740796..1740801)) /locus_tag="lmo1682" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341030" regulatory complement(1740856..1740861) /regulatory_class="ribosome_binding_site" gene complement(1740916..1740987) /locus_tag="lmot18" /db_xref="GeneID:3167583" tRNA complement(1740916..1740987) /locus_tag="lmot18" /product="tRNA-Glu" /db_xref="GeneID:3167583" gene complement(1740993..1741083) /locus_tag="lmot19" /db_xref="GeneID:3167584" tRNA complement(1740993..1741083) /locus_tag="lmot19" /product="tRNA-Ser" /db_xref="GeneID:3167584" gene complement(1741118..1741190) /locus_tag="lmot20" /db_xref="GeneID:3167585" tRNA complement(1741118..1741190) /locus_tag="lmot20" /product="tRNA-Asn" /db_xref="GeneID:3167585" gene complement(1741197..1741270) /locus_tag="lmot21" /db_xref="GeneID:3167586" tRNA complement(1741197..1741270) /locus_tag="lmot21" /product="tRNA-Ile" /db_xref="GeneID:3167586" gene complement(1741296..1741366) /locus_tag="lmot22" /db_xref="GeneID:3167587" tRNA complement(1741296..1741366) /locus_tag="lmot22" /product="tRNA-Gly" /db_xref="GeneID:3167587" gene complement(1741390..1741462) /locus_tag="lmot23" /db_xref="GeneID:3167588" tRNA complement(1741390..1741462) /locus_tag="lmot23" /product="tRNA-His" /db_xref="GeneID:3167588" gene complement(1741491..1741563) /locus_tag="lmot24" /db_xref="GeneID:3167589" tRNA complement(1741491..1741563) /locus_tag="lmot24" /product="tRNA-Phe" /db_xref="GeneID:3167589" gene complement(1741568..1741643) /locus_tag="lmot25" /db_xref="GeneID:3167590" tRNA complement(1741568..1741643) /locus_tag="lmot25" /product="tRNA-Asp" /db_xref="GeneID:3167590" gene complement(1741648..1741721) /locus_tag="lmot26" /db_xref="GeneID:3167591" tRNA complement(1741648..1741721) /locus_tag="lmot26" /product="tRNA-Met" /db_xref="GeneID:3167591" gene complement(1741764..1741853) /locus_tag="lmot27" /db_xref="GeneID:3167592" tRNA complement(1741764..1741853) /locus_tag="lmot27" /product="tRNA-Ser" /db_xref="GeneID:3167592" gene complement(1741876..1741949) /locus_tag="lmot28" /db_xref="GeneID:3167593" tRNA complement(1741876..1741949) /locus_tag="lmot28" /product="tRNA-Met" /db_xref="GeneID:3167593" gene complement(1741961..1742034) /locus_tag="lmot29" /db_xref="GeneID:3167594" tRNA complement(1741961..1742034) /locus_tag="lmot29" /product="tRNA-Met" /db_xref="GeneID:3167594" gene complement(1742077..1742149) /locus_tag="lmot30" /db_xref="GeneID:3167595" tRNA complement(1742077..1742149) /locus_tag="lmot30" /product="tRNA-Ala" /db_xref="GeneID:3167595" gene complement(1742172..1742245) /locus_tag="lmot31" /db_xref="GeneID:3167596" tRNA complement(1742172..1742245) /locus_tag="lmot31" /product="tRNA-Pro" /db_xref="GeneID:3167596" gene complement(1742256..1742329) /locus_tag="lmot32" /db_xref="GeneID:3167597" tRNA complement(1742256..1742329) /locus_tag="lmot32" /product="tRNA-Arg" /db_xref="GeneID:3167597" gene complement(1742339..1742424) /locus_tag="lmot33" /db_xref="GeneID:3167598" tRNA complement(1742339..1742424) /locus_tag="lmot33" /product="tRNA-Leu" /db_xref="GeneID:3167598" gene complement(1742439..1742513) /locus_tag="lmot34" /db_xref="GeneID:3167599" tRNA complement(1742439..1742513) /locus_tag="lmot34" /product="tRNA-Gly" /db_xref="GeneID:3167599" gene complement(1742529..1742610) /locus_tag="lmot35" /db_xref="GeneID:3167600" tRNA complement(1742529..1742610) /locus_tag="lmot35" /product="tRNA-Leu" /db_xref="GeneID:3167600" gene complement(1742616..1742688) /locus_tag="lmot36" /db_xref="GeneID:3167601" tRNA complement(1742616..1742688) /locus_tag="lmot36" /product="tRNA-Lys" /db_xref="GeneID:3167601" gene complement(1742730..1742805) /locus_tag="lmot37" /db_xref="GeneID:3167602" tRNA complement(1742730..1742805) /locus_tag="lmot37" /product="tRNA-Thr" /db_xref="GeneID:3167602" gene complement(1742814..1742886) /locus_tag="lmot38" /db_xref="GeneID:3167603" tRNA complement(1742814..1742886) /locus_tag="lmot38" /product="tRNA-Val" /db_xref="GeneID:3167603" gene complement(1742900..1743009) /locus_tag="lmor07" /db_xref="GeneID:985636" rRNA complement(1742900..1743009) /locus_tag="lmor07" /product="5S ribosomal RNA" /db_xref="GeneID:985636" gene complement(1743091..1746021) /locus_tag="lmor08" /db_xref="GeneID:985635" rRNA complement(1743091..1746021) /locus_tag="lmor08" /product="23S ribosomal RNA" /db_xref="GeneID:985635" gene complement(1746266..1747811) /locus_tag="lmor09" /db_xref="GeneID:985634" rRNA complement(1746266..1747811) /locus_tag="lmor09" /product="16S ribosomal RNA" /db_xref="GeneID:985634" regulatory complement(1748238..1748256) /regulatory_class="terminator" gene complement(1748263..1748709) /locus_tag="lmo1683" /db_xref="GeneID:985632" CDS complement(1748263..1748709) /locus_tag="lmo1683" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Fur family transcriptional regulator" /protein_id="NP_465208.1" /db_xref="GeneID:985632" /translation="MAVSNATLKEAVDVLKKTGVRITPQRHAILEFLINSHTHPTADD IYRALEGNFPNMSVATVYNNLRVFRDAGLIKELSYGDASSRFDFSTSNHYHAICNVCG KIVDFHYPGLDEVEHFAAHMTGYEIDNHRLEVYGICPACKEKQSNN" misc_feature complement(1748281..1748694) /locus_tag="lmo1683" /note="Fe2+ or Zn2+ uptake regulation protein Fur/Zur [Inorganic ion transport and metabolism]; Region: Fur; COG0735" /db_xref="CDD:440498" regulatory complement(1748717..1748722) /regulatory_class="ribosome_binding_site" gene complement(1748792..1749733) /locus_tag="lmo1684" /db_xref="GeneID:985633" CDS complement(1748792..1749733) /locus_tag="lmo1684" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycerate dehydrogenase" /protein_id="NP_465209.1" /db_xref="GeneID:985633" /translation="MNILFTLEVPEYLQTLQAEKFPEDTFYYESNDHFANLAEIDIIV TYGSNITKAKIKQASNLKLIMVFSAGVDSLPREIIQERKIKVANVRGIHAIPMGEFAL SFMLAHVKKAAFFYQMQKEKNWASEEPITELAGKTLVVAGTGAIGAKVAEFAQAFDME IIGVNTTGHPAKPFSETYAMTNIEKVAPLADFFVSVLPHTDETMGIYSLSFFEKMKNN AVFINIGRGSAVELNVLEKASKDQLIAHFYLDVLSEEPLSEDNSLWQANNVTITPHVS GHSDKYLERSFEIWFENINHLKENTKLRNEIDLNKGY" misc_feature complement(1748795..1749706) /locus_tag="lmo1684" /note="A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous...; Region: Rossmann-fold NAD(P)(+)-binding proteins; cl21454" /db_xref="CDD:473865" misc_feature complement(order(1749062..1749064,1749143..1749148, 1749236..1749244,1749296..1749298,1749302..1749310)) /locus_tag="lmo1684" /note="NAD binding site [chemical binding]; other site" /db_xref="CDD:240631" regulatory complement(1749745..1749750) /regulatory_class="ribosome_binding_site" regulatory 1749865..1749870 /regulatory_class="ribosome_binding_site" gene 1749878..1751176 /gene="gsaB" /locus_tag="lmo1685" /db_xref="GeneID:985629" CDS 1749878..1751176 /gene="gsaB" /locus_tag="lmo1685" /EC_number="5.4.3.8" /experiment="EXISTENCE:[PMID:19448609]" /note="converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate" /codon_start=1 /transl_table=11 /product="glutamate-1-semialdehyde aminotransferase" /protein_id="NP_465210.1" /db_xref="GeneID:985629" /translation="MDHSMSKKLHDEALLHIVGGVNSPSRSNKGVGGGIPVTMERASG AYFYDVDGNKYIDYLAAFGPIITGHAHPHITEAITKAAQNGVLYGTPTKHEITFAKML KEAIPSLEKVRFTNSGTEAVMTTIRVARAYTGRDKIIKFAGCYHGHFDLVLVEAGSGP STLGIPDSAGVTKSTAEEVITVPFNDLDSFKEALAIWGDQVAAVLVEPIVGNFGMVAP EDGFLEAVNELAHVNGSLVIYDEVITAFRFMYGGAQNYLGVIPDLTAMGKIIGGGLPI GAYGGRIDIMEKVAPLGPAYQAGTHAGNPASILSGIACLEVLQEEGLYERFEKYGSML KDGIEKAAAKHNIAVTVNQIVGALTVYFTEDPVTNYAEAGATNGELFGRFFKGMLEEG INLAPSKYEAWFITSAHSEADILETIQAVDTVFGKMVQDN" misc_feature 1749878..1751161 /gene="gsaB" /locus_tag="lmo1685" /note="glutamate-1-semialdehyde aminotransferase; Provisional; Region: PRK12389" /db_xref="CDD:183493" misc_feature order(1750226..1750234,1750310..1750315,1750319..1750321, 1750496..1750498,1750595..1750597,1750601..1750606, 1750679..1750681) /gene="gsaB" /locus_tag="lmo1685" /note="inhibitor-cofactor binding pocket [active]" /db_xref="CDD:99735" misc_feature order(1750229..1750234,1750310..1750315,1750496..1750498, 1750595..1750597,1750604..1750606,1750679..1750681) /gene="gsaB" /locus_tag="lmo1685" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99735" misc_feature 1750679..1750681 /gene="gsaB" /locus_tag="lmo1685" /note="catalytic residue [active]" /db_xref="CDD:99735" regulatory 1751269..1751274 /regulatory_class="ribosome_binding_site" gene 1751283..1752371 /locus_tag="lmo1686" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985630" CDS 1751283..1752371 /locus_tag="lmo1686" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465211.1" /db_xref="GeneID:985630" /translation="MKFGARILKTGIAITLALFIAQLCNSPSPSLAGISAVFAIQPSI YRSYRTILERAQGNVIGAIIAIIFGLYIGNDFILIGVASIICVALLMQFRLENTIGLA VVTLIIVMDSPGNDFLEIALIRFGTIMLGLLAAFIVNLFFLPPKYEVSLFQLIYNTNS EIVRWIKLNLRHAADFPLLKKDMEWMQKQLNQTRNLYGLYREERTFLKKNAISKGRKI AVYRQMLLCSQKGFELLKIQHRYENDYLQLPPDKQELIRQHIDYLTDKHEQLLLTYID KVSIDLEYVESHLAQDPQDLMQLFLREMRETEKDEYEDMMDKYHLMRIIASVFAYQET IDYLEKLIHSFKLRHTKENQIDINVNEE" misc_feature 1751283..1751708 /locus_tag="lmo1686" /note="Aromatic acid exporter family member 1; Region: ArAE_1; pfam06081" /db_xref="CDD:428756" regulatory 1752380..1752407 /regulatory_class="terminator" regulatory complement(1752380..1752407) /regulatory_class="terminator" gene complement(1752413..1752940) /locus_tag="lmo1687" /db_xref="GeneID:985631" CDS complement(1752413..1752940) /locus_tag="lmo1687" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465212.1" /db_xref="GeneID:985631" /translation="MYLPKEKEIIQIKSYKHNGKLHRTWKKTVVLKSTENIIIGGNDH TLVVEADGRKWVTREPSICYFHSDYWFNVISMIREDGIYHYCNLGTPFAVDEQALKYI DYDLDIKVFPDGRFHLLDEGEYEQHRRQMKYPDSIDRILRHNVDVLSHWILDKKGPFS PDYIDIWYEKYKEYR" misc_feature complement(1752416..1752940) /locus_tag="lmo1687" /note="hypothetical protein; Provisional; Region: PRK13662" /db_xref="CDD:184219" regulatory complement(1752948..1752953) /regulatory_class="ribosome_binding_site" gene complement(1753095..1753841) /locus_tag="lmo1688" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985625" CDS complement(1753095..1753841) /locus_tag="lmo1688" /EC_number="1.3.1.10" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes a key regulatory step in fatty acid biosynthesis" /codon_start=1 /transl_table=11 /product="enoyl-ACP reductase" /protein_id="NP_465213.1" /db_xref="GeneID:985625" /translation="MNKVALVTGSSRGLGREIAIALAKEGYDIAVNFSRNRKKAEEVQ QEIEQLGRKCVIFKANVGDVEKVRELFKAVDEEFGRLDIFINNAASGVLRPLMELEES HWDWTMNINAKALLFAGQEAAKLMQRHQSGKIISLSSIGSIRYLENYTTVGVSKAAVE SLTRYLAVELAPFGIAVNAVSGGLIETDALNHFPNREELLKDAVSKTPAGRMIEPNDL VNAVLFLASEKADMIRGQTILVDGGRTLLV" misc_feature complement(1753098..1753841) /locus_tag="lmo1688" /note="enoyl-[acyl-carrier-protein] reductase FabL; Region: PRK08063" /db_xref="CDD:236145" gene complement(1753845..1754942) /locus_tag="lmo1689" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985627" CDS complement(1753845..1754942) /locus_tag="lmo1689" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="A/G-specific adenine glycosylase" /protein_id="NP_465214.1" /db_xref="GeneID:985627" /translation="MRKMKRLTWDETKITAFQEALVSWYEANKRVLPWRENTEPYRIW VSEIMLQQTKVDTVIPYFNRFMTQFPTMESFVNADEADILKAWEGLGYYSRVRNLQTA MKQVMADFSGEVPTDLTTILSLKGVGPYTAGAILSIAYNQAEPAVDGNVMRVIARVLE IGEDIMKASTRKIFEEVLYQLIDKKNPAAFNQGLMEIGALVCTPTKPMCMLCPLQPFC EAHKNGVETNYPVKIKKVKMKTKELLSIIVISEDGKIAIEKRPENGLLANMWQFPTIE ISKKENDEVAKLQFLHNYGLEVLLEDEPIAHIKHVFSHLVWKMDIRVAKLQSAIPNEN WYFATEEEMKRLAFPVPYQKMWQAWKDFKGE" misc_feature complement(1753860..1754909) /locus_tag="lmo1689" /note="Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs [Replication, recombination and repair]; Region: MutY; COG1194" /db_xref="CDD:440807" regulatory complement(1753850..1753855) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1689" regulatory complement(1754948..1754953) /regulatory_class="ribosome_binding_site" regulatory 1755129..1755134 /regulatory_class="ribosome_binding_site" gene 1755143..1756123 /locus_tag="lmo1690" /db_xref="GeneID:985626" CDS 1755143..1756123 /locus_tag="lmo1690" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465215.1" /db_xref="GeneID:985626" /translation="MDTGTHVVMGIALGALATVDPVVAGSSQAAIGIMTATIIGSQIP DIDTVLKLKNNADYIRNHRGITHSLPMLAIWPLLISSILYLLFPAATFIHLLLWTFIA VGLHIFVDIFNAYGTQAVRPFKETWVAFGFINTFDWFIFGSHVVAIAAWLLGSPVLPT FVTLYVILALYYVARFVTQRMIKHAVQNLIPDSEEIIIASTIHFFQWRVAVTTKDHYY VGRAFKRNISIYEKFDRLPVPDNEIIRSAKKDKNLAAFISFSKVYNWRIEEKLDGTYV TFTDLRYRSNGHYPFVAVVKLDDDLKIVSSYTGWIFSTEKLYKKLAPVSI" misc_feature 1755143..1755604 /locus_tag="lmo1690" /note="Membrane-bound metal-dependent hydrolase YbcI, DUF457 family [General function prediction only]; Region: YbcI; COG1988" /db_xref="CDD:441591" regulatory 1756130..1756147 /regulatory_class="terminator" regulatory complement(1756130..1756147) /regulatory_class="terminator" gene complement(1756156..1756617) /locus_tag="lmo1691" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985623" CDS complement(1756156..1756617) /locus_tag="lmo1691" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="deoxyuridine triphosphate nucleotidohydrolase" /protein_id="NP_465216.1" /db_xref="GeneID:985623" /translation="MKVRGFEVVNEASRKFPEQTISLPIRGDKGSAGYDFFSNETVTI VPGEKHIFWTDIKSYMQEDEVLNIYVRSSIGIKKGLLLCNGTGIIDSSYYSNPGNDGN IGIAIKNFSNEPVSIEAGERVAQGVFQKYLVADTDIVANESRVGGVGSTGR" misc_feature complement(1756159..1756617) /locus_tag="lmo1691" /note="Trimeric dUTP diphosphatases; Region: trimeric_dUTPase; cl00493" /db_xref="CDD:444938" misc_feature complement(order(1756243..1756245,1756255..1756257, 1756264..1756278,1756288..1756290,1756294..1756296, 1756300..1756302,1756306..1756308,1756345..1756347, 1756354..1756356,1756372..1756380,1756396..1756413, 1756417..1756419,1756465..1756467,1756471..1756476, 1756489..1756491,1756519..1756524)) /locus_tag="lmo1691" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:143638" misc_feature complement(order(1756306..1756311,1756339..1756341, 1756348..1756356,1756399..1756407)) /locus_tag="lmo1691" /note="active site" /db_xref="CDD:143638" regulatory complement(1756625..1756630) /regulatory_class="ribosome_binding_site" gene complement(1756629..1756862) /locus_tag="lmo1692" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985622" CDS complement(1756629..1756862) /locus_tag="lmo1692" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1692" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465217.1" /db_xref="GeneID:985622" /translation="MYTYLDELTAELMVKNPHLDKEQALWWIEMLWSDFESSYAKAGY PYRGPEYAADYVRQQIERHGSFLHQVERKDPNK" misc_feature complement(1756638..1756856) /locus_tag="lmo1692" /note="WVELL protein; Region: WVELL; pfam14043" /db_xref="CDD:433668" gene complement(1756864..1757673) /gene="recX" /locus_tag="lmo1693" /db_xref="GeneID:985620" CDS complement(1756864..1757673) /gene="recX" /locus_tag="lmo1693" /experiment="EXISTENCE:[PMID:19448609]" /note="Regulatory protein recX; binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities" /codon_start=1 /transl_table=11 /product="recombination regulator RecX" /protein_id="NP_465218.1" /db_xref="GeneID:985620" /translation="MKITSISVQQKNKERYNIFIDEKYNFSVDEEVLARYQLMKGKVL TEADIEEIKQADMVRKGLNKAINFLSHRVRSEKEIRDYLRKQEMEPFAIDEILKKLAN MDYINDFEFAELYTKTQIKTTLKGPRTIERELVEKGLTREIISRVIEEYSDEAQLENA TKQAMKIMKRNNKSAKKMLQQKIITDLIQKGFTSELAKAAATEATSELDVADEAEILQ KQIEKTMRKNKRYKPSIAKQKTITSLMQKGFSYDTIQSYLTENEISFEEEE" misc_feature complement(1756897..1757667) /gene="recX" /locus_tag="lmo1693" /note="recombination regulator RecX; Provisional; Region: recX; PRK14135" /db_xref="CDD:237619" regulatory complement(1756872..1756877) /regulatory_class="ribosome_binding_site" /gene="recX" /locus_tag="lmo1693" regulatory complement(1757680..1757685) /regulatory_class="ribosome_binding_site" regulatory 1757757..1757762 /regulatory_class="ribosome_binding_site" gene 1757771..1758673 /locus_tag="lmo1694" /db_xref="GeneID:985624" CDS 1757771..1758673 /locus_tag="lmo1694" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="CDP-abequose synthase" /protein_id="NP_465219.1" /db_xref="GeneID:985624" /translation="MHILLTGATGFIGDHLVHELEKSDHELYILTRQKLKNRANVHYI EWLNEDKLPNLEDLPVDVCINLAGAGLMDEKWTYDRKKVIVNSRIEATSALLSIVKKM KSKPKLWINASAIGAYTSSKSTIYLDTEENTYADNFLGKTVYEWEKTASAASDLGIRV VYARFGLVLGTNGGSFPVFEKLFQTYTGGRFGNGRQWYSWIHVDDVVAAILFIFDHEQ INGVVNFTAPHPVQEKKFAERLGKKMHKPYKTPVPKKIIKFILGERAMTILDSQRAYP EKLMSNHFEFRFETLQEALDDLLD" misc_feature 1757777..1758655 /locus_tag="lmo1694" /note="TIGR01777 family protein; Region: yfcH" /db_xref="CDD:273800" regulatory 1758681..1758708 /regulatory_class="terminator" regulatory complement(1758682..1758709) /regulatory_class="terminator" gene complement(1758694..1761291) /locus_tag="lmo1695" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985618" CDS complement(1758694..1761291) /locus_tag="lmo1695" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465220.1" /db_xref="GeneID:985618" /translation="MKEKLMQAYAWFQKNSTVVKIVFITFVMAFVIFEIINIATGIDY PSLKENLTSQSPEQIFIMFIVGLIAVTPMLLYDYVIVKLLPGKFSPSHVIASGWITNT FTNIGGFGGVLGASLRASFYGKNASHKEILLAISKIALFLVSGLSIYCLVSLATLLIP GFADHFVNYWPWLLAGGLYFPILFTITKWKSKSLFVDLPIKRELTLIIASLLEWGFAF GCFAIIGTLMGEPVDIFKVFPLFVIASVIGIASMVPGGVGTFDVVMILGLSQLGVSQE LALAWMLFYRIFYYIIPFVVGLLFFVQKAGKKVNDFLEGLPLLFLQKVAHRFLVIFVY GSGLLLILSSAVPNAIYHVPFLYKIMPFNFLFTSQITIVAFGFLLLGLARGIECKTKK AYIITVIVLGCAIFNTLARVFSMKQAIFLGIVLLCLFLARNEFYREKLVYTWSKVIID SIIFIVCLAGYIVIGIYNSPNIKHSKEIPDYLRIASEHLWLVGFVGVFIAVVSLVIIY IYLSTTKEKLGSPFEAVKVREHLAKWGGNEVSHTMFLRDKLLFWAAEGEVLFSYRIIA DKMVIMGEPTGNMDKMEAAIEEVMMNADRFGYRPVFYEVRGTMIPYLHDHGFDFIKLG EEGFVDVQNFTMSGKKKKGERALMNKLEREGYTFEIIEPPFNHDTWTTLRAVSDEWLD GREEKGFSLGFFDTYYLEQAPIAIAKNGEGTIVGFASMMPSYTDEMTSIDLMRYSKEA PSGIMDFLFINLFEKAKEDGFQTFNAGMAPLANVGESKYAFLGERLAGLVYRYSQGFY GFKGLRNFKSKYVTEWEQKFVAFRKRSSIAFTMLQLMILVGKKRPLANSQVVLDFPLE EETKKPDSE" misc_feature complement(1758772..1761246) /locus_tag="lmo1695" /note="bifunctional lysylphosphatidylglycerol flippase/synthetase MprF; Region: bifunc_MprF; NF033480" /db_xref="CDD:468043" regulatory complement(1761299..1761304) /regulatory_class="ribosome_binding_site" gene complement(1761318..1761992) /locus_tag="lmo1696" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985619" CDS complement(1761318..1761992) /locus_tag="lmo1696" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465221.1" /db_xref="GeneID:985619" /translation="MQVQKCRFFVLLLPALYLLYGISLALQFGNNADLINTIANSCLL FLATLILTNMARLKNWIDFIWFCVFILYIIILLHLVAYIAVGDFVNSTYTGNFHIQKE MINLIPFTTIENTFQQTLPTMPTIIQIFGNVLLLCPLSFFMLYFKITSTAGKTLLVIF LTSCGIELLQFAQTTMITGFESISLPPKRSTDIDDIILNTLSGLIGILLAYALPSVRK RINKRR" misc_feature complement(1761366..1761680) /locus_tag="lmo1696" /note="Glycopeptide antibiotics resistance protein [Defense mechanisms]; Region: VanZ; COG4767" /db_xref="CDD:443799" regulatory complement(1762002..1762007) /regulatory_class="ribosome_binding_site" regulatory 1762186..1762191 /regulatory_class="ribosome_binding_site" gene 1762200..1763165 /locus_tag="lmo1697" /db_xref="GeneID:985615" CDS 1762200..1763165 /locus_tag="lmo1697" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465222.1" /db_xref="GeneID:985615" /translation="MKELLGLLKEGNKSALTAALVNTVVSIIKGVTYFFTGNIAMFAE TLHSLGDAANQFFVFIGSALSKKRPTKRFPHGFGRMVNLVLLGAVIVVGIMAFETIRE GFAHIIHPTSSTGFLINLTVLLLCTLLEFSVLVKAMHEIAHDVGLESKGLRLFKDSIL NLGKAKAATKLVFLEDSVATGGGLLAMIAVIISHFTPFHQAEGIASMLIGVMMFIVVG KVFLDNAAGVIGESDQSMHLTVGQLVMSDPDVRDIQVLTVLKEGDVFHVDVEVELDPM LTLAEVDDIKDRLEESIGKLRGVADVLISFDEDDAIRNWEYGDGR" misc_feature 1762230..1763120 /locus_tag="lmo1697" /note="Divalent metal cation (Fe/Co/Zn/Cd) efflux pump [Inorganic ion transport and metabolism]; Region: FieF; COG0053" /db_xref="CDD:439823" regulatory 1763177..1763204 /regulatory_class="terminator" regulatory complement(1763177..1763204) /regulatory_class="terminator" gene complement(1763209..1763751) /locus_tag="lmo1698" /db_xref="GeneID:985612" CDS complement(1763209..1763751) /locus_tag="lmo1698" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ribosomal-protein-alanine N-acetyltransferase" /protein_id="NP_465223.1" /db_xref="GeneID:985612" /translation="MRITGERIYLRPFQIIDANQKLAFHLANKAFFEGYSMERDDRFY TIEEQQSLISRLEDFAASDVEYYYGIFLNDTDELIGTINLFSILRESLQSAFIGYFLD KKHNGNGYATEAVQLIVDFGFDILGLHRIEAGVMPKNERSKQVLLKAGFHLEGLAVQN VRINGTWEDHQVLAIINPGD" misc_feature complement(1763218..1763751) /locus_tag="lmo1698" /note="Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: RimL; COG1670" /db_xref="CDD:441276" regulatory complement(1763759..1763764) /regulatory_class="ribosome_binding_site" regulatory 1763927..1763932 /regulatory_class="ribosome_binding_site" gene 1763941..1764843 /locus_tag="lmo1699" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985617" CDS 1763941..1764843 /locus_tag="lmo1699" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="chemotaxis protein" /protein_id="NP_465224.1" /db_xref="GeneID:985617" /translation="MNVNAETEDATLLLDGLLQNVAIIRFDTNKKVTYANALFAEAMG YSEEEMLKLSHPDLCFPDFVQSASYKAMWTNLLAGQKFQNKIERKNARGERVWFEATY IPIIREDTVVGVAKIATDITRREETVHDFASGLKSMATNLKEHSSVGKTRSEALLELV KSITKESNENTDTLHDLQTEAQNIHGIINTINGIASQTNLLALNAAIEAARAGDAGRG FSVVAEEVRKLSSRVEEAIKEVEKSVNGITQEINTISSGTERVEAKVEESQEVLILSL EDFSQIESASTALDQNAGAFTKMI" misc_feature 1763953..>1764321 /locus_tag="lmo1699" /note="PAS domain [Signal transduction mechanisms]; Region: PAS; COG2202" /db_xref="CDD:441804" misc_feature <1764280..1764798 /locus_tag="lmo1699" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" regulatory 1764856..1764861 /regulatory_class="ribosome_binding_site" gene 1764871..1765077 /locus_tag="lmo1700" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985611" CDS 1764871..1765077 /locus_tag="lmo1700" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1700" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465225.1" /db_xref="GeneID:985611" /translation="MKLIGKHPSGRAIIIRLNNQEYHYETANSFGSATSLTRAKTEAR ADSFTSSEMDQGLHIGNWHWKELG" regulatory 1765085..1765108 /regulatory_class="terminator" regulatory complement(1765085..1765108) /regulatory_class="terminator" gene complement(1765117..1765470) /locus_tag="lmo1701" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985610" CDS complement(1765117..1765470) /locus_tag="lmo1701" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1701" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465226.1" /db_xref="GeneID:985610" /translation="MKKLFDETNEFEAKYYRTIWYGYIDNEFAPELSDEIKQLIQRDL AEKTANPIEATHWVFYNETQAGDAIGDKVRSSIMVRYREEKFVVHYNVSDFQFVTVFD VATAFKDQLEQALNA" regulatory complement(1765479..1765484) /regulatory_class="ribosome_binding_site" gene complement(1765499..1765900) /locus_tag="lmo1702" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985982" CDS complement(1765499..1765900) /locus_tag="lmo1702" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glutathione transferase" /protein_id="NP_465227.1" /db_xref="GeneID:985982" /translation="MISGLSHITLIVKDLNKTTTFLREIFNAEEIYSSGDQTFSLSKE KFFLIAGLWICIMEGDSLQEQTYNHIAFRIQSEEVDEYIERIKSLGVEIKPERPRVEG EGRSIYFYDFDNHLFELHAGTLEERLKRYHE" misc_feature complement(1765508..1765897) /locus_tag="lmo1702" /note="fosfomycin resistant protein subfamily FosX; Region: FosX; cd08364" /db_xref="CDD:319952" misc_feature complement(order(1765523..1765525,1765529..1765531, 1765541..1765549,1765556..1765558,1765655..1765657, 1765667..1765669,1765682..1765702,1765712..1765714, 1765730..1765732,1765736..1765738,1765742..1765744, 1765751..1765753,1765769..1765771,1765775..1765777, 1765781..1765783,1765823..1765825,1765868..1765897)) /locus_tag="lmo1702" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319952" misc_feature complement(order(1765520..1765522,1765541..1765543, 1765547..1765549,1765577..1765579,1765592..1765594, 1765694..1765696,1765700..1765702,1765730..1765732, 1765736..1765738,1765769..1765771,1765874..1765876, 1765880..1765882)) /locus_tag="lmo1702" /note="active site" /db_xref="CDD:319952" regulatory complement(1765909..1765914) /regulatory_class="ribosome_binding_site" gene complement(1765915..1767294) /locus_tag="lmo1703" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985603" CDS complement(1765915..1767294) /locus_tag="lmo1703" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="RNA methyltransferase" /protein_id="NP_465228.1" /db_xref="GeneID:985603" /translation="MNQNPVEEGQKFPLTIRRMGINGEGIGYFKKAVVFVPGAITGEE VVVEAVKVRDRFTEAKLNKIRKKSPNRVTAPCPVYEACGGCQLQHVAYSAQLELKRDI VIQSIEKHTKIDPTKLKIRPTIGMEDPWRYRNKSQFQTRMVGSGQVETGLFGANSHQL VPIEDCIVQQPVTIKVTNFVRDLLEKYGVPIYDEKAGSGIVRTIVVRTGVKTGETQLV FITNSKKLPKKREMLAEIEAALPEVTSIMQNVNQAKSSLIFGDETFLLAGKESIEEKL MELEFDLSARAFFQLNPFQTERLYQEVEKALVLTGSETLVDAYCGVGTIGQAFAGKVK EVRGMDIIPESIEDAKRNAEKNGIENVYYEVGKAEDVLPKWVKEGFRPDAVIVDPPRS GCDQGLIKSLLDVEAKQLVYVSCNPSTLARDLALLAKKYRIRYMQPVDMFPQTAHVET VVLLQLKDK" misc_feature complement(1765948..1767240) /locus_tag="lmo1703" /note="23S rRNA (uracil-5-)-methyltransferase RumA; Region: rumA; TIGR00479" /db_xref="CDD:129571" regulatory complement(1767301..1767306) /regulatory_class="ribosome_binding_site" gene complement(1767359..1767739) /locus_tag="lmo1704" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985606" CDS complement(1767359..1767739) /locus_tag="lmo1704" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465229.1" /db_xref="GeneID:985606" /translation="MTKPLKLVYTENGFDTGNFLIDDKMTDYSPADLMLMSIASCSAI VFRNILKKKRVEFTDLWVDATMERIPEEENRISAIHLHFKITGPILDPKALEKALKLT PKYCSMVRSVEKSILVDESLEIMP" misc_feature complement(1767371..>1767655) /locus_tag="lmo1704" /note="Uncharacterized OsmC-related protein [General function prediction only]; Region: YhfA; COG1765" /db_xref="CDD:441371" regulatory complement(1767747..1767752) /regulatory_class="ribosome_binding_site" regulatory 1767829..1767834 /regulatory_class="ribosome_binding_site" gene 1767846..1768490 /locus_tag="lmo1705" /db_xref="GeneID:985607" CDS 1767846..1768490 /locus_tag="lmo1705" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="deoxyguanosine kinase/deoxyadenosine kinase" /protein_id="NP_465230.1" /db_xref="GeneID:985607" /translation="MEGVENKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKDNRI LEMFYDDPKRWAFALQIYFLNTRFRSIKAALTDQNNVLDRSIYEDALFTQINFEEGNI SEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQIDDNP GLLEYYKHLHSRYDSWFASYDKSETLVINIDEIDINKPNDADYVMQLIHEKLKR" misc_feature 1767864..1768487 /locus_tag="lmo1705" /note="Deoxyadenosine/deoxycytidine kinase [Nucleotide transport and metabolism]; Region: Dck; COG1428" /db_xref="CDD:441037" regulatory 1768485..1768514 /regulatory_class="terminator" gene complement(1768520..1769389) /locus_tag="lmo1706" /db_xref="GeneID:985609" CDS complement(1768520..1769389) /locus_tag="lmo1706" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_465231.1" /db_xref="GeneID:985609" /translation="MWKKVVKYVKQNGIVQVGQAVSARVGRNDVSGNAAQLAYYMLFS IFPMLLIAATLLAYLHIDKDSVFNMIKEFAPDQIMDFLEENLNNLLTQKNGGLLSIGI IATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMFFTLAMLATVGATLLLLVFG QQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLYWVAPNRRSTLISVLPGA LFSTIGWTVASVGFAYYVNNFGNYSATYGSIGVIIILMLWFYLTGIILMIGGELNATL AIRKKKKELGEIN" misc_feature complement(1768538..1769362) /locus_tag="lmo1706" /note="Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase) [Function unknown]; Region: BrkB; COG1295" /db_xref="CDD:440906" regulatory complement(1769398..1769403) /regulatory_class="ribosome_binding_site" regulatory 1769467..1769472 /regulatory_class="ribosome_binding_site" gene 1769479..1769700 /locus_tag="lmo1707" /db_xref="GeneID:985604" CDS 1769479..1769700 /locus_tag="lmo1707" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1707" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465232.1" /db_xref="GeneID:985604" /translation="MNLETPSQENLNFMLTEITTKLKMVNVGVFENLELDSVDYNALV DIYQLIKRKSTFSPREMQLFAEELRRVRK" misc_feature 1769479..1769697 /locus_tag="lmo1707" /note="Uncharacterized conserved protein YfkK, UPF0435 family [Function unknown]; Region: YfkK; COG4840" /db_xref="CDD:443868" regulatory 1769713..1769726 /regulatory_class="terminator" gene complement(1769720..1770526) /locus_tag="lmo1708" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985601" CDS complement(1769720..1770526) /locus_tag="lmo1708" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aminoglycoside N3'-acetyltransferase" /protein_id="NP_465233.1" /db_xref="GeneID:985601" /translation="MGEKMAIWRTKKPATKQKIVSDLQELGIKKGDTIIFHASMSKAH WICGGPVTVILALQELVGELGNIVMPAQTGQLSDPAKWENPPVPESWWKIIRRETPPF DPLVTPTRGMGVIAETFRTMPDVERSFHPYHSFCAWGKDKKQILANQPLAKSMGDESP LGKMYQLDAKIILFGVDNNNNTSLHLAEERSNAFPLIENQAAFLKNGEIIWEKYQEID YNSEVFIALGRAYEKEHDFHPTTIIGAPTKIYDMRDLVDFGTKYFQTKNH" misc_feature complement(1769729..1770490) /locus_tag="lmo1708" /note="Aminoglycoside N3'-acetyltransferase [Defense mechanisms]; Region: YokD; COG2746" /db_xref="CDD:442043" regulatory complement(1770536..1770541) /regulatory_class="ribosome_binding_site" gene complement(1770648..1771406) /locus_tag="lmo1709" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985602" CDS complement(1770648..1771406) /locus_tag="lmo1709" /EC_number="3.4.11.18" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn" /codon_start=1 /transl_table=11 /product="methionine aminopeptidase" /protein_id="NP_465234.1" /db_xref="GeneID:985602" /translation="MITLKSRREIDEMKAAGKILADTHKELKKIIKPGITSWDLEVFT EEFLRKNGATPEQKGFEGYEYAICASINDEICHGFPRKQKLNQGDIITVDMVVNYHGA LADSAWTYAVGEVPDDVKHLMDVTHKALYLGIEQAQVGARVGDIGHAIQTYVESENLA VVREFIGHGVGPTLHEKPDIPHYGTAGKGPRLKEGMVITVEPMVNMGAWKAKMDDNGW TARTVDGSLSAQYEHTFAITKDGPEILTYQGEND" misc_feature complement(1770669..1771403) /locus_tag="lmo1709" /note="Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]; Region: Map; COG0024" /db_xref="CDD:439795" regulatory complement(1771417..1771422) /regulatory_class="ribosome_binding_site" gene 1771594..1772040 /locus_tag="lmo1710" /db_xref="GeneID:985600" CDS 1771594..1772040 /locus_tag="lmo1710" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="flavodoxin" /protein_id="NP_465235.1" /db_xref="GeneID:985600" /translation="MTKVMIVYASMTGNTQEIADILGEELEKYDIEVEIEECISVDPE DLLEYDGALIGGYTYDDGQLPDEFVDFYEDMADVDFSGKVCASFGSGDTFYDEYCLTV DLVETRLKEQGATVPVAGLKVDLDPDEEDVVRAESYAKTFVEALKG" misc_feature 1771603..1772022 /locus_tag="lmo1710" /note="flavodoxin, short chain; Region: flav_short; TIGR01753" /db_xref="CDD:273789" regulatory 1772048..1772071 /regulatory_class="terminator" regulatory 1772164..1772169 /regulatory_class="ribosome_binding_site" gene 1772178..1773410 /locus_tag="lmo1711" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985599" CDS 1772178..1773410 /locus_tag="lmo1711" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aminopeptidase" /protein_id="NP_465236.1" /db_xref="GeneID:985599" /translation="MTVFSEKLEKYAELIVKVGVNVQPEQKVVIMAPVDAAPLVRLIS KYAFEVGAEDVIMDWRDEELGALRYKNAPLRVFESAPVHRVAEKTELAKEGACFISIT SEDPDLLNGVDSNKIATFQKTMGGAMSEFRELMQANVVSWTVVAAASQGWAAKVFPDL TPAEQMETLWEAIFETTRINTENPVETWKNHDQTLAAKAESLNEKQFTSLHYTAPGTD LTIGLPKNHLWVGAGSKNKKGHEFMANMPTEEVFCCADKLKVEGYVSSTKPLSYAGNI IDDFKITFEKGRIVGVEAASGEEILKDLIATDEGSHYLGEVALVPDPSPISQSGILFY NTLFDENASNHLAIGSAYAFNVKGGEEMSREELEAAGVNNSLTHVDFMIGSSEMDIDG VTESGEVVPVFRKGDWAF" misc_feature 1772187..1773401 /locus_tag="lmo1711" /note="Thermophilic metalloprotease (M29); Region: Peptidase_M29; pfam02073" /db_xref="CDD:426588" regulatory 1773440..1773473 /regulatory_class="terminator" regulatory 1773500..1773505 /regulatory_class="ribosome_binding_site" gene 1773514..1774773 /locus_tag="lmo1712" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985590" CDS 1773514..1774773 /locus_tag="lmo1712" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="multidrug resistance protein" /protein_id="NP_465237.1" /db_xref="GeneID:985590" /translation="MKFSTWDINLKVRLFGEALLDISFWMVFPFLTIYFSESIGRELT SLLLIISQVLAVFTALLGGYFADNFGRKRMMSISVIGEGFGFLVFAIGALHVVDSPYL SFAGFAIASVFMAFYQPASQAMIADVVPPEHRTHIYSVFYMMINIAVVIGPILGSVLF YNFTTETLLAIVCADLLLLFLLQKFGHETAPLLVNPDLQKEVVRKSIGAVLMEQLKNY KIIFKDKIFFLYIVAGIIVSQSFMQLDLLFPLYIKEVIGASNLFAFHFTGEQLFGVIV SINGFFVAALTVVVTRWMSHFREKFVFMNSSFLYAIAIFLFGISTGPWGAICAIILFS FAELMTVGLQQTFVSQLAPEDKRAMYFSAAGLRYTLGKVIAPLAITLSTLIGYTGTFT IIGILALISGLIYYYMYSEFEKQRQVS" misc_feature 1773541..1774740 /locus_tag="lmo1712" /note="Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_MdtH_MDR_like; cd17329" /db_xref="CDD:340887" misc_feature order(1773571..1773576,1773583..1773588,1773595..1773597, 1773688..1773690,1773853..1773858,1773862..1773870, 1773877..1773879,1773937..1773939,1773946..1773951, 1773958..1773960,1774213..1774215,1774222..1774227, 1774234..1774242,1774249..1774251,1774360..1774362, 1774372..1774374,1774519..1774524,1774534..1774536, 1774546..1774548,1774594..1774596,1774603..1774608, 1774615..1774620,1774627..1774629) /locus_tag="lmo1712" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340887" regulatory 1774781..1774803 /regulatory_class="terminator" regulatory 1774981..1774986 /regulatory_class="ribosome_binding_site" gene 1774991..1775983 /locus_tag="lmo1713" /db_xref="GeneID:985588" CDS 1774991..1775983 /locus_tag="lmo1713" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="rod shape-determining protein MreB" /protein_id="NP_465238.1" /db_xref="GeneID:985588" /translation="MFGTTTIGIDLGTANILVYSKEKGIILNEPSVVALNTNDGTVLA IGQEAKEMIGKTPTSISAVRPMKDGVIADFDLTSGLLREIMRRISVSGVRKPNVVVCT PTGATSVERRAISDAVRSTGARSVVLIEEPVAAAIGADLPVAEPVANVIVDIGGGTSE IAIISYGGVVSSTSIRTGGDHMDEEIIQYIRKNYNLLIGQTTAERIKMELGYAPIEHV TQTADIRGRDLLTGLPKTIQVSSTEIQSALAETLQRILEAIRNTLELCPPELSGDIVD RGIILSGGGSLLQGFRDWLVEEIDVPVHMAPSPLESVAIGTGRSLVFADKLAKN" misc_feature 1774994..1775977 /locus_tag="lmo1713" /note="Cell shape-determining ATPase MreB, actin-like superfamily [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]; Region: MreB; COG1077" /db_xref="CDD:440695" gene 1776112..1776183 /locus_tag="lmot39" /db_xref="GeneID:3167611" tRNA 1776112..1776183 /locus_tag="lmot39" /product="tRNA-Arg" /db_xref="GeneID:3167611" regulatory complement(1776194..1776226) /regulatory_class="terminator" gene complement(1776257..1776829) /locus_tag="lmo1714" /db_xref="GeneID:985595" CDS complement(1776257..1776829) /locus_tag="lmo1714" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1714" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465239.1" /db_xref="GeneID:985595" /translation="MLKLYKKEQNQILYAEYWINNDKAIVHYGKVGKVGEKEETSNYL EKYENKAAFHEAFINRFVPQGYSEYPPNENFWILIQYPLKSLTGTKRDIWLKDRVTDV LNDNLGWKGLGIVDGFDIGQTANPNKQFALNIFCVVVDEEIGIKVIKSALRNNSCDYT SVKIASRPFSDDAEYTLKFSAKKKDVTFYV" regulatory complement(1776837..1776842) /regulatory_class="ribosome_binding_site" gene complement(1776910..1777578) /locus_tag="lmo1715" /db_xref="GeneID:985568" CDS complement(1776910..1777578) /locus_tag="lmo1715" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465240.1" /db_xref="GeneID:985568" /translation="MMKITKRKKITLIILGGIIGLSFILYKPLINYLSEQAANPRGII GEITTKIWSSYFEDLSKWTISNTELSNVNHVLDIGYGGGSNVKNLAELNKNWTIYGVD ISEESYKTATNLNKKAINNGTVKLSIQDVALMNYQADFFDLVYAIQTHMYWDNPQKGF EEIYRVMSQDGVLILSSEKDKIDYHMDEYKTTASLTALLKEIGFREVVEKEKGNWILY TVRK" misc_feature complement(1776964..1777359) /locus_tag="lmo1715" /note="Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Region: UbiE; COG2226" /db_xref="CDD:441828" regulatory complement(1777585..1777590) /regulatory_class="ribosome_binding_site" regulatory 1777747..1777752 /regulatory_class="ribosome_binding_site" gene 1777763..1778338 /locus_tag="lmo1716" /db_xref="GeneID:985587" CDS 1777763..1778338 /locus_tag="lmo1716" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_465241.1" /db_xref="GeneID:985587" /translation="MNNYEKRTLKKKTAIIQAALSLFGKQGFSDVSIKDIATLADVSQ VSIYNYFGSKEALVGECARIIMQDTITLAEEILASEGTFTQKLERALKLCNAEINLSL SKFISQEASKDAQFITLLVNNINALKNEIYMKYIAIGKQEKIIDSRLSDQSIQLFIEA INGLGFTVPEEELEEKQAEIVQLFLYGLIGK" misc_feature 1777775..>1778035 /locus_tag="lmo1716" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" regulatory 1778353..1778393 /regulatory_class="terminator" regulatory complement(1778353..1778393) /regulatory_class="terminator" gene complement(1778415..1779482) /locus_tag="lmo1717" /db_xref="GeneID:985593" CDS complement(1778415..1779482) /locus_tag="lmo1717" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465242.1" /db_xref="GeneID:985593" /translation="MKMDSETLLLDVKKLGERVSTLKDSIATEEATKTSLIMPFFQLL GYDVFNPLEFSPEYVADVGIKKGEKVDYAILNNNNPIILIEAKSIKSDLKNHDSQLFR YFGTTTAKFGILTNGNEYRFYTDLEEPNKMDKTPFFSFVLTEIKDVQISEIFKFQKEN FDVENISKAASDLKYLNFVKEFLTKEVNDPSEEFVKFILGEIYDGIKTKVIIDKFTPV VKRGFRQFIADQVNSKLNAALNTSVSVEDLEVPQVEANAEEEEDIITTEAEIEAFTTT KLLLKDTIDTSRIFYRDNKSYFNIIIDNSIRKWVLRLYINNARTYFVINDEEKTTIEI VDVIDIFNHADKIIPVVERYL" misc_feature complement(1778418..1779452) /locus_tag="lmo1717" /note="Uncharacterized conserved protein, contains restriction enzyme R protein N terminal (HSDR_N) domain [Function unknown]; Region: COG4748" /db_xref="CDD:443782" regulatory complement(1779488..1779493) /regulatory_class="ribosome_binding_site" regulatory complement(1779669..1779702) /regulatory_class="terminator" gene complement(1779714..1780802) /locus_tag="lmo1718" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985442" CDS complement(1779714..1780802) /locus_tag="lmo1718" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465243.1" /db_xref="GeneID:985442" /translation="MRKLGISVFPQHVALEESLEYIETAAKYGFSRIFTCLISANDEA EFAKLETICKRAKDLGFDVIADVDPTVFESLNITYKELDRFKELGLAGLRLDLGFSGS EEAAMSFDDTDLKIELNISNGTRYVENILSYQANVGNIIGCHNFYPRKYTGLSREHFL RTSKQFKDLNLRTAAFVSSNSGEFGPWFVVDGGLPTMEEHRGVEITVQAKDLWNTGLI DDVIVGNMFASEDELRALSELNRNELQLAVEFLDGATDVEKEIVLTQKHFNRGDASEY VLRSTMTRVNFKQFDFPAHDTNTIAKGDVTIDNDGYERYKGEMQVALQEMENSGNTNI VARIVPEERYLLDTILPWQHFRLVEKKK" misc_feature complement(1779729..1780793) /locus_tag="lmo1718" /note="Uncharacterized conserved protein, DUF871 domain [Function unknown]; Region: COG3589" /db_xref="CDD:442808" regulatory complement(1780813..1780818) /regulatory_class="ribosome_binding_site" gene complement(1780824..1781126) /locus_tag="lmo1719" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986671" CDS complement(1780824..1781126) /locus_tag="lmo1719" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS lichenan transporter subunit IIA" /protein_id="NP_465244.1" /db_xref="GeneID:986671" /translation="MELEQTIMQLIVHGGNAKSDAMLAIEAAKKGDFDVADEQIKNAE AALLEAHHSQTSLIQGEARGEKAEVSLLLVHAQDHLMNAITFKDLAKEIVDLYRSK" misc_feature complement(1780833..1781114) /locus_tag="lmo1719" /note="PTS system, Lactose/Cellobiose specific IIA subunit; Region: PTS_IIA; pfam02255" /db_xref="CDD:460510" regulatory complement(1781135..1781140) /regulatory_class="ribosome_binding_site" gene complement(1781196..1781504) /locus_tag="lmo1720" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986877" CDS complement(1781196..1781504) /locus_tag="lmo1720" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS lichenan transporter subunit IIB" /protein_id="NP_465245.1" /db_xref="GeneID:986877" /translation="MNNIMLVCSAGMSTSLLVKKMTEAIEKQQVDATVIAVAEADFDK YKGNVDVVLLAPQVRFLEKNLKRVLDPLGIPVAIINGIDYGTMDGEKVLNDALAMIEK " misc_feature complement(1781202..1781498) /locus_tag="lmo1720" /note="Phosphotransferase system cellobiose-specific component IIB [Carbohydrate transport and metabolism]; Region: CelA; COG1440" /db_xref="CDD:441049" regulatory complement(1781513..1781518) /regulatory_class="ribosome_binding_site" regulatory complement(1781621..1781650) /regulatory_class="terminator" gene complement(1781661..1784339) /locus_tag="lmo1721" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985585" CDS complement(1781661..1784339) /locus_tag="lmo1721" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_465246.1" /db_xref="GeneID:985585" /translation="MSSRKEEVLQLLNEKEEKVSAADVAELLQMDRANASRYLNDLFK EKRIDKLPGKPVFYQAIKTTERVNQHVGNMQESAFGRLIGSEDSLKVSIQQAKAAILY PPNGLHSLILGRTGTGKSLFAECMYQFAKESETIPADAPFVSFNCADYAQNPQLLFGH IFGVIKGAYTGAEETREGLLKKADGGILFLDEIHRLPPEGQEMLFTFIDKGEFRPLGE SANVHHAQVQIIGATTESPDNFLLETFTRRIPMTITLPSLAERNLEERYQLVEFFLNQ EATRLHQSIRVHRKALIAFLLYHASANVGQLQRDLKLACAKAFLHYKTKTANYILIEQ DDLPIHVQKGLLHLKDEPEKLNRLIDVNKAIFKFVDTSDEFVETEDVHDVYHAIQEKA DQLMKEGKDQSELEEALYVDVDQYFHNYMVQLPTHQTAKEIIAPAVWELTEKVYAMAE EKLNRKYNEKMKFAFSLHLQSTIERVREQKHIIHPDLNNIRKKYPKEFQVAIDLSALI EQELSIEIPFDEIGFLTMFLTEEVVDTSLSQENQVEVIVMMHGRSTATSMVETVQELL SIESGIALDMPLTVEVKAMYEKLKQTVIKLNPVKGVLILSDMGSLTSFGNMLTEELGI RTKTVTMVSTPVVLEAMRKASLGRGLEDIYQSCEQLFENKYKAHVLRAKPVKNAVIFT CFTGEGVAEQLRKVVAPIIDETKIEIIVLQFLHKEAFRERIDQLMEEYNILAIMGSVA FEYRDIPFFSALEVLSEGGLGIVSRILNDEVPYEKLIASLEGNLQAVSSAEQLVYFLR KVISELQLQLNVILESGVDIGMILHLAFLIERVKLGAVDREFPDLNEFAKNHMVEMQI TQQMMENVEIEYDIVIPQSEIAYLTQMMLSNQVEEN" misc_feature complement(1781937..1784333) /locus_tag="lmo1721" /note="Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription, Signal transduction mechanisms]; Region: PspF; COG1221" /db_xref="CDD:440834" misc_feature complement(1781679..1781948) /locus_tag="lmo1721" /note="PRD domain; Region: PRD; pfam00874" /db_xref="CDD:459973" regulatory complement(1784347..1784352) /regulatory_class="ribosome_binding_site" regulatory complement(1784425..1784469) /regulatory_class="terminator" gene complement(1784473..1785798) /locus_tag="lmo1722" /db_xref="GeneID:985584" CDS complement(1784473..1785798) /locus_tag="lmo1722" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase" /protein_id="NP_465247.1" /db_xref="GeneID:985584" /translation="MTESNIPSFWAEKWQEHGYETPTEIQSAMYQPIKDGADVLAVSP TGTGKTVAYALPTLEKIEAIPKTQWLVLAPSHELVMQITEVIRSWLPSDDLTVISLIG GANVKRQIEKLKKKPQIIVASPGRALELIKQKKIKMHEIKTITLDECDQLLRQENFKS TLEIVESAVRDRQLTLVSATKLENPDMFFAQTENTPVMLEVTAKPEELTNVEHLYMDV ESRDKATLLRRISHIKDMRGLVFVKDKPRMEILLEKLHYDKVKAAGIHGEIRKEKRKK YLDDFKKGTLTYLIVTDVAARGLDIEDLPYVIHYDLAASEKEYTHRSGRTGRMGKSGT VITFANPREIRTLKQYLTIHNLKGKQVRFYQGKLLDGAVPENKIAKKASRPPKQVQKS KKDDGKKPFRKDKPTGAAGGRKEKPTNSAKPTRNKPNKFNKKPNNFKKS" misc_feature complement(1784554..1785795) /locus_tag="lmo1722" /note="Superfamily II DNA and RNA helicase [Replication, recombination and repair]; Region: SrmB; COG0513" /db_xref="CDD:440279" regulatory complement(1785805..1785810) /regulatory_class="ribosome_binding_site" gene complement(1785841..1786614) /locus_tag="lmo1723" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985582" CDS complement(1785841..1786614) /locus_tag="lmo1723" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1723" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465248.1" /db_xref="GeneID:985582" /translation="MLKAHWKLEWNAHRYIFFATFVGWLICLLIGLFSKLGNGLLEPL VMDSDIDGVVFASGDGVFIALIGFVGASWILIWLLLFLAAARSGIYDENRYLFFQTET PIWKILLNKLIIVLIETAILTAGVLVIIINLAIIGGAEMSFSVGLNIIFDTFLAMGLN TFSLACIIFLATALSMVPVNGFRVGFIGALIYFVIINAIQISIGTDFLPKSSTEIHFY YSLFSSVHFNFIQMGFNLLMALVYFFLATKILNKSADLQ" gene complement(1786607..1787287) /locus_tag="lmo1724" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986662" CDS complement(1786607..1787287) /locus_tag="lmo1724" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465249.1" /db_xref="GeneID:986662" /translation="MNENLITITGLTKKYRKRKPLNDINLSLQKGKIIGLLGPNGAGK TTLLNAISGLLKPTSGTINLAENSKIAYLPSEDFLPNMVICDYFRIYHSFFPDFDQEK AKQMIRSFGINIKENTKYLSKGNAAKVMLALILCRDVDLYLLDEPFSEIDLISRDDLI KSIATFLKEDATLVVTTHLIQDMEMMFDEIIFLKRGKIIEQIDTETLREEYRKSVMDY YREVFGHA" misc_feature complement(1786655..1787272) /locus_tag="lmo1724" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" regulatory complement(1786624..1786629) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1724" gene complement(1787280..1787648) /locus_tag="lmo1725" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985573" CDS complement(1787280..1787648) /locus_tag="lmo1725" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family tramscriptional regulator" /protein_id="NP_465250.1" /db_xref="GeneID:985573" /translation="MNPTFHADKPIYSQISDWMKKQMITGEWKGEDKLPSVREMGVQL AVNPNTVSRAYQELERAGYIYAKRGMGSFVTSDKALFDQLKIELADAITERFLEEAKS IGLDDQAAIELLIKRSRNHE" misc_feature complement(1787310..1787648) /locus_tag="lmo1725" /note="DNA-binding transcriptional regulator YhcF, GntR family [Transcription]; Region: YhcF; COG1725" /db_xref="CDD:441331" regulatory complement(1787295..1787300) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1725" regulatory complement(1787654..1787659) /regulatory_class="ribosome_binding_site" regulatory complement(1787729..1787758) /regulatory_class="terminator" gene complement(1787769..1788752) /locus_tag="lmo1726" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985614" CDS complement(1787769..1788752) /locus_tag="lmo1726" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465251.1" /db_xref="GeneID:985614" /translation="MKLGIMGTNWITDSFIEGAINSGEWNLTAVYSRTEEKARAFGEK YGELTYFTDIEEMGKSDALDAVYIASPNALHYQHAVSLLKNKKHVIVEKPIFSTVAEL EHAHQIARENNVFLFEAARHIQEPNFKRLQENIEKVGTIHGATLAYMKYSSRYDQVLN GEEPNIFSLKFSGGSIVDLGVYPLYSAITLFGEPVKATYFATKLPTGVDGLGPIILEY PTFNITIIQGKNSQSFLPSEIYGQKGTLIVDPLTGIEKITFYDNATKEETELAGPVVA NDMQFEAAEFARIIEQSDRDTYEYLADLSLKVLRVSNELRHQNDIWFDAEK" misc_feature complement(1788006..1788752) /locus_tag="lmo1726" /note="Predicted dehydrogenase [General function prediction only]; Region: MviM; COG0673" /db_xref="CDD:440437" regulatory complement(1788762..1788767) /regulatory_class="ribosome_binding_site" gene complement(1788812..1789777) /locus_tag="lmo1727" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986088" CDS complement(1788812..1789777) /locus_tag="lmo1727" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="NP_465252.1" /db_xref="GeneID:986088" /translation="MVGIKDIAKKAGVSISTVSYALNGSPKVTEKTRKRIMTIANELN YIPNMAARTLKTRETKIIGVYLTNYGGIFYGTLLEGLTQTLYKHGYELIACSGTKTHR FLPEKMIDGAIILDANFPSSEIINYANRGHKLVVLDRELTHENVSQVLLDNKGGATLA IDYLSTNFKGDFYVITGPDDSYDARVRLETAKQELARSGDKKVHIIEGDFSEESGERA ASIIAKNWKAPVSVFALNDNMAIGMYRYFAGTDLEIGKDVRIIGFDNTDISEYLVPRL ATIEYSKYKWGAVAADKLVELLEGGKAENEIIYTTRISGPSVSNN" misc_feature complement(1788854..1789777) /locus_tag="lmo1727" /note="DNA-binding transcriptional regulator, LacI/PurR family [Transcription]; Region: PurR; COG1609" /db_xref="CDD:441217" regulatory complement(1789786..1789791) /regulatory_class="ribosome_binding_site" gene complement(1789825..1793085) /locus_tag="lmo1728" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985695" CDS complement(1789825..1793085) /locus_tag="lmo1728" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cellobiose phosphorylase" /protein_id="NP_465253.1" /db_xref="GeneID:985695" /translation="MTMLKEIKKADLSAAFYPSGELAWLKLKDIMLNQVIQNPLENRL SQIYVRAHFGDKIEIYPLLNKDSEVGFNENGVEYRGVVGPFRYSVQMHFHTRGWFYDV IVDGDFEFDLVYLQDLGLAEQAAVRTNEAYMSQYIDYHVTEGATGFTVQARQNQPQNE CFPAVQIGALTKIVGYATDGFDIYGTNYKLTSELANLKEKSLPNRVYQYEFAQISIQT ELFTNHGETSFYGYVTENQPKASGAPIGNLAELKSNISEQSYQKSTKAILNKHIGTPI TGETISDSWLQEKFPDRIQEEKQNAALLSFFTPNYAHVVMREKEAELERPHGSILLDK IDVLNPEATLSATTYMYGAFLSQLVAGNTNMNKWNSHARNPLNILQTSGLRIYIELDS ELRLLSVPSVWETSTNYSTWYYQWNDDLITVQTTLTAYSKEAFVTVHSEKGNSYKLVL TNQVTMGTNEYDTTVKKEIKDGIVTYFPADDSPILETYPELQFRVDGTYNELTDERYF AKDYMGTAGLDVFVFEPSDKATFHVQAKLTDEFSKPTEDLEADNKVIRASYDELTAQF HLNHQSTTAEKLNLTVYWYAHQMLVHYASPHGLEQYSGAAWGTRDVSQGPFEFFLATG NKAVLRKLVLTIFSHQYQDTGDWPQWFMFDKYTSIQQEESHGDVIVWPLKIIGDYLEM SGDTEILEEAIPYVDRESKTFTKEQGTLLEHIKLAVKTIEARFMKGTALSNYGDGDWD DTLQPANAQLKKNMVSSWTVALTYQTFKRLAAFLPVGEKYETLANNVQADFAKYMTND TDVIPGFLYLEEGKAPVWMIHPEDKETNIKYRLIPLTRSVISELVDKKQASRNFEIIG EHLLHPDGVRLMSEPAHYAGGVSTHFKRAEQAANFGREVGLQYVHAHIRYIEALAKIG DKSAWHMLDVINPINIKEVVPNAALRQSNTYFSSSDAAFLDRYQAQNEFSRVKEGSIP VKGGWRIYSSGPGIYLHQLISSVLGIRQTEETLIFDPILPEELDGLECHIELDNYPLD LTFESSDEGCIVVNGEKQPVENAANLYRTGALILPKKNLTTKCSQITIKFQKNNRL" misc_feature complement(1789939..>1791282) /locus_tag="lmo1728" /note="Cellobiose phosphorylase [Carbohydrate transport and metabolism]; Region: COG3459" /db_xref="CDD:442682" gene complement(1793082..1795253) /locus_tag="lmo1729" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985699" CDS complement(1793082..1795253) /locus_tag="lmo1729" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="beta-glucosidase" /protein_id="NP_465254.1" /db_xref="GeneID:985699" /translation="MKQEKVQDLVNQMTLDEKIAQCLQLSPFLFKGTNKNAELTGPLL QEMKLTDAHTENAGSVLGSSSALDMIGIQEAYLKTNRLGIPLVFMADVIHGYKTVFPI PLALGCSFDRETVRVMAEVSALEATADGHHVTFSPMLDLVRDPRWGRVMESTGEDPFL NSELGKAMVDGYQGDASKLDGNFDRMAACVKHFAAYGAAEAGLEYNTVNMSTRELYQN YLPAYHAAIQAGAKLVMTAFNVVDGVPATMNKWLNRDVLRGEMDFDGVLISDWGAVAE VINHGTARNPKEAAQFSMEAGVDLEMMTTCYIHELKGLIEEGKLSESLLDEAVLRMLH LKNDLGLFEDPYRGLKNNDRTKDILTDDSRGKARAAGVESAVLLENKNRLLPLAKETK IALVGPLASSPDILGGWNVYGEEKDGINVETGLREVFETVEVISTEYTEFSDEDKVAV KAAVQNMDVVVLALGEKNEWGGEAGSLATIRLPEAQYELAKFVQTLEKPVVITLFNGR PLEVKELAESSDALLELWFPGTEAGRVTADLLSGASNPSGKLSMSFPQTTGQIPVYYN HLRTGRPQTPENKGERYVSHYLDIPNEPFYPFGYGKSYSEFELKTSSLPKELNLGEPL HVEVTIKNISDIAGKEVIQVYLQDVTASISRPVKELKAFEKVALQAGEEKTVTFELTS EAFSFYNHQLEKVQEPGLHRIFVGTSSEDVDAFELEVGGYV" misc_feature complement(1793103..1795250) /locus_tag="lmo1729" /note="beta-glucosidase BglX; Region: PRK15098" /db_xref="CDD:185053" regulatory complement(1793095..1793101) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1729" regulatory complement(1795259..1795264) /regulatory_class="ribosome_binding_site" regulatory 1795668..1795673 /regulatory_class="ribosome_binding_site" gene 1795681..1796925 /locus_tag="lmo1730" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985575" CDS 1795681..1796925 /locus_tag="lmo1730" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter substrate-binding protein" /protein_id="NP_465255.1" /db_xref="GeneID:985575" /translation="MKKKMFVVLALVLSLSLVLMACGGSKDDANSGDSKVLNVWAMGD EAKSLKELAQKFTKDTGIEVKVQVIPWANAHDKLLTAVASKSGPDVVQMGTTWMPEFV EAGALLDITKDVEKSKNMNSDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKK VGYNEAPKTWDELSDAALKLSKRGKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGTP VFNKKPFVDTVTYLDSFIKNGSAPDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDT APDIDGKWATAVLPKKENNESSLGGANLSIFKYSDKKDDALKFMDYMSQPDVQLSWLK DTNSMPARMDAWEDDMLKNDPYYKVFGEQMKTAEPMPLIPQFEEIAQLYGKSWEQIYR GGADVQTQMDTFNDQVETLLKK" misc_feature 1795786..1796919 /locus_tag="lmo1730" /note="Maltose-binding protein MalE; possesses type 2 periplasmic binding fold; Region: PBP2_MalE; cd14747" /db_xref="CDD:270450" misc_feature order(1795966..1795971,1796119..1796121,1796272..1796277, 1796482..1796484,1796788..1796790,1796818..1796820, 1796827..1796829) /locus_tag="lmo1730" /note="putative chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270450" gene 1796987..1797880 /locus_tag="lmo1731" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985577" CDS 1796987..1797880 /locus_tag="lmo1731" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_465256.1" /db_xref="GeneID:985577" /translation="MKQFLNKNTPYLFISPALFLLLLFSLLPILLAFVISFTDIDLVG LADYSKINFIGIDNYVNIMQDPVFLKSIFNTLFYVVIGVPLVIVCSLGIALMINFSQA KIFQFFRLIFYTPSITNVVAVAVVWSYLYNPRFGLLNYLLSFLDLGPVPWLQDPTIAK LSLIILAVWRAIGVNMIIFLAALQGIPREYYEAASLDGANSRQQLFKITVPMLRFAIF FVTVTTMIGWLQFFEEPFVMTEGGPLDSTNSVALFIYQNGFQLSKFGYAAAGSFILFI AIIIITIIQFRIQRKNNGGDI" misc_feature 1797080..1797799 /locus_tag="lmo1731" /note="ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpA; COG1175" /db_xref="CDD:440788" regulatory 1797884..1797889 /regulatory_class="ribosome_binding_site" gene 1797897..1798727 /locus_tag="lmo1732" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985574" CDS 1797897..1798727 /locus_tag="lmo1732" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_465257.1" /db_xref="GeneID:985574" /translation="MNQYRQKSRGAQIAVISILTVGGFFMILPFIWMVLSSLKTDAEI LKIPPTIWPETFTLDNFTKLFTEMDFAIYLKNTLIIVFFSFFGLFLNAMAGYGFAKFK FKGKNKLFYLVLATMMIPGQVTMIPVYLLLNAAGLTNTMTGIVLPGLVGAFGIFLFRQ FMSTISDDLLEAARLDGASEFYIFWRIVIPISRPVLAVQGILTFIAGWNSFLWPLIIA NDEKFYTLSVGLQLLKGQYGSNYALQMAGATFMVIPIILIFMTFQKYILKGFNVSGMK " misc_feature 1797909..1798724 /locus_tag="lmo1732" /note="ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpE; COG0395" /db_xref="CDD:440164" regulatory 1798740..1798764 /regulatory_class="terminator" regulatory complement(1798740..1798764) /regulatory_class="terminator" gene complement(1798772..1800241) /gene="gltD" /locus_tag="lmo1733" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984552" CDS complement(1798772..1800241) /gene="gltD" /locus_tag="lmo1733" /EC_number="1.4.1.13" /experiment="EXISTENCE:[PMID:19448609]" /note="glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate" /codon_start=1 /transl_table=11 /product="glutamate synthase subunit beta" /protein_id="NP_465258.1" /db_xref="GeneID:984552" /translation="MGKATGFMEYDRIPSPGRDPKSRTRDWNEYSLPMPVADLTIQAA RCMDCGVPFCSVGMEIKNGVSGCPLHNLIPEWNDAVYRGDWYEALQLLLKTNNFPEFT GRICPAPCEGGCTVAISEPAVGIKSIEKAIIDRGFEEGWIKPAPPKKRTGKRIAVIGS GPAGLACADQLNKAGHSVTVIEKSDRIGGLLMYGIPTMKLEKEQVTRRVNLMAEEGIE FVTGVAAGTDVTFAELREEYDSIVLATGAGNARDIPLAGRDAAGIHFAVPYLSQSTRD NLDNGGIQTLSAKGKNVVIIGGGDTGADCVATALRQGAKSIYQFGIQDKLPELRDGEN PWPQYPRVFKMDYAHEEAEAVYGRDPREYLINTTSFEKDEAGNLIGLHTVEVEENKAE RKYTPVEGSEKYFEVDMVLIAIGFAGTTEDIFTNFGVGKTDRHTIDAAKGFYRTSEEG VFACGDARHGQSLVVTAIAEGREAAREVDFYLMGETFLP" misc_feature complement(1798775..1800241) /gene="gltD" /locus_tag="lmo1733" /note="glutamate synthase subunit beta; Reviewed; Region: gltD; PRK12810" /db_xref="CDD:237213" regulatory complement(1800251..1800256) /regulatory_class="ribosome_binding_site" gene complement(1800256..1804848) /locus_tag="lmo1734" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986573" CDS complement(1800256..1804848) /locus_tag="lmo1734" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glutamate synthase large subunit" /protein_id="NP_465259.1" /db_xref="GeneID:986573" /translation="MKQTNLPKKHGLYNPENEQDACGIGFVANIKKISSHKIVEQGIH MLCQLKHRGGEVGGDTGDGAGILLEISDSFFRRECSKLGITLPEKYHYAVGMFNFPQN KTERECLMDETEKLIASEGQMFLGWRKLPTDVTKVGAGARKTEPAIYQLFIQKNAKLD EAGFERALYLIRKQIEKFAATSKLITETFYVPSLSTRTVIFKGMLLPEQINQYYLDLA DPAYVSAFALVHSRFSTNTFPSWERAHPYRYLIHNGEINTQRGNVNWMKAREKRAESG LLGEDLAKLLPIIDESGSDSATLDNALEFLVQAGRSLPHAAMMLIPEPWDKNPHMTDP KRAFYEYHSTLMEPWDGPTSISFTNGRVIGTILDRNGLRPARYYETKDHTIIYSSETG VVPVDPSEIIRKETVGAGTMLLIDLEEGRIVADAELKEELTTEKPYRAWLEAEMTEIA DLAAADLHYEAMDKSERFKKQRAFGYTQDELNKILIPMVTEKKDPMGAMGYDAPLAVL SQRPQVLFNYFKQLFAQVTNPPIDGIREETVTSAMTLLGDEGNILNPTAQNANRIRLK TPILSRKEFAALEQQTKFAQPTVTLPILFKAEERDGLEARLEALFAEADEKIAAGAEL LILSDEGVNADWIGIPSLLAVSGLHHHLVKAGTRTQVSIIVKTAEARDVHQCALLIGY GADAVFPSLAIDTFDGLIKEGRIKGFTLDEAESRYIEAITDGILKIMSKMGISTVQSY RGAQIFEAIGIGDDVIRNYFPGTASQIGGIPLEVIAQEAWLRHREAYHDIGYQSFTLN TGGEYQWRSNGEYHVYNPLAIHSLQQATRENDRETYNLYSDLMQNQNNAFLRGLLTFT SDRKPIPLDEVEPAEAIFKRFKSGAMSYGSISQEAHEALAIAMNRIGGKSNSGEGGEN PNRFTPDENGDWRRSAIKQIASGRFGVTSHYLVNAEELQIKMAQGAKPGEGGHLPGNK VYPWISKTRGSTTGVGLISPPPHHDIYSIEDLSQLIFDLKNANQNARINVKLVSKTGI GTIAAGVAKGNADVILVSGYEGGTGAAARTSIRHAGVPWEIGLAETHQTLLLNGLRNK VVVETDGKLMTGKDVLVAAMLGAEEFGFATAPLVTLGCVMMRVCHLDTCPVGVATQNP ELRKKFSGSADYVVNFFHFIVAEMREMMAELGFRSLTEIIGHKEFLTTHEKKEAHWKA KYIDFSNMLYSDDFYKNQVQYCTKQQDHKIDQTLDMRELVPLIQPALENGEKVTGTFA VRNVDRAIGTIAGSFISKKYGAAGLPEDTISLDFVGSAGQSFGAYTPLGMTLRIHGDA NDYFGKGLSGGKLIVSPDAKTPIKPHDSAIVGNVTLYGATGGFAYMHGKAGARFAVRN SGATAVVEGIGDNGCEYMTGGAVVVLGDIGENFAAGMSGGVAYIYTNNKQATTAKINH ELVNSRSTFSTSELTKLKQLIEQHANLTGSDFAQDILQNWEAEKANFIFVIPNEYEMM LTRITTLEQTGKTHDEAELQAFYEHKDGKLVAGVAK" misc_feature complement(1800385..1804824) /locus_tag="lmo1734" /note="glutamate synthase subunit alpha; Provisional; Region: gltB; PRK11750" /db_xref="CDD:236968" regulatory complement(1804856..1804861) /regulatory_class="ribosome_binding_site" regulatory 1805029..1805034 /regulatory_class="ribosome_binding_site" gene 1805041..1805928 /gene="gltC" /locus_tag="lmo1735" /db_xref="GeneID:985367" CDS 1805041..1805928 /gene="gltC" /locus_tag="lmo1735" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcription activator of glutamate synthase operon GltC" /protein_id="NP_465260.1" /db_xref="GeneID:985367" /translation="MELRQLKYFMEVARVEHMTKASENLHVAQSAVSRQITKLEEELG VHLFDRVGRNMQLTSVGQDFLKQAAIALNELQKAEALVTEYTDPAKGTVRVGLPNSLS TKVLPSVISTFREKYPQITYQFMEGTNEELTEMLLSGVLDMTFLSPVPESSEQIEAIR FFDEKLKLIVPKTHPLAENFTVSLKELASEKFVLYPEDFDLYKIVTKAANKKGFEPQI AFQSRDFYTIQGLVGAGLGISILPEMILDGAIFKETKSIALRDKELRRSVGIITTKKR NLSPSENLFRSFIISFFSN" misc_feature 1805047..1805226 /gene="gltC" /locus_tag="lmo1735" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature 1805314..1805907 /gene="gltC" /locus_tag="lmo1735" /note="The substrate binding domain of LysR-type transcriptional regulator GltC, which activates gltA expression of glutamate synthase operon, contains type 2 periplasmic binding fold; Region: PBP2_GltC_like; cd08434" /db_xref="CDD:176125" misc_feature order(1805359..1805364,1805368..1805373,1805380..1805382, 1805392..1805394,1805398..1805418,1805695..1805712, 1805728..1805733,1805737..1805742) /gene="gltC" /locus_tag="lmo1735" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176125" regulatory complement(1805866..1805897) /regulatory_class="terminator" gene complement(1805925..1806443) /locus_tag="lmo1736" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986571" CDS complement(1805925..1806443) /locus_tag="lmo1736" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465261.1" /db_xref="GeneID:986571" /translation="MIIRKEQPQDYEAIRRVNEEAFKGTVEADLIESIRRSDYYQPAL SLVAEAEDGLIVGYIMFSEISLEAAGRSRFILALAPLAVLPAYQGTRVGSRLMEEGIR LSREKAYPAIAVLGHADYYPRFGFIPSEQFAIPAPFDVPAEYFMLLELYDGSLENLAG TIHYPAAFSENN" misc_feature complement(1805994..1806437) /locus_tag="lmo1736" /note="Predicted N-acetyltransferase YhbS [General function prediction only]; Region: yhbS; COG3153" /db_xref="CDD:442387" gene complement(1806446..1807552) /locus_tag="lmo1737" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985567" CDS complement(1806446..1807552) /locus_tag="lmo1737" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycerol dehydrogenase" /protein_id="NP_465262.1" /db_xref="GeneID:985567" /translation="MLNKELIVRGAPQEYLCQVGAWDTLPTHLERRGLKNVLVVRGNA SWEVAKKKFPVLSTVTSTFEVYNGGSTYEERDRLVAIMETNKMDAIIAVGGGKIADVC KAAAAVLRLPVIILPTLASTCAAYTPLSVMYDEEGAMIRYDVFASSNALLLIDPEMIL DSPKELLIAGIGDTLAKWYEADVIINSLPTKSVEIEIAHFAAKMCRDNLLQYSGEALA AMDKQVLNEAFVKIIETNILVGGMVGGFGDDYGRCAGAHSIHDALTMVPETHHLLHGN KVAYGILVQLVIENRWDEIERLLPFYSELGLPMSLYDMGLATLAEETLVDVSRRATEP HETIHMMPGEMTADVVLNAMKQLEDSMAMKRVTK" misc_feature complement(1806482..1807519) /locus_tag="lmo1737" /note="Glycerol_dehydrogenase-like; Region: GlyDH-like; cd08172" /db_xref="CDD:341451" misc_feature complement(order(1806731..1806733,1806770..1806772, 1806782..1806784,1807022..1807024,1807034..1807036, 1807055..1807057,1807079..1807081,1807130..1807135, 1807190..1807192,1807196..1807201,1807244..1807246, 1807253..1807255,1807262..1807270,1807427..1807429)) /locus_tag="lmo1737" /note="putative active site [active]" /db_xref="CDD:341451" misc_feature complement(order(1806731..1806733,1807079..1807081, 1807184..1807186,1807190..1807192,1807196..1807201, 1807262..1807270,1807427..1807429)) /locus_tag="lmo1737" /note="putative NAD binding site [chemical binding]; other site" /db_xref="CDD:341451" misc_feature complement(order(1806731..1806733,1806782..1806784, 1807034..1807036)) /locus_tag="lmo1737" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:341451" regulatory complement(1807560..1807565) /regulatory_class="ribosome_binding_site" gene complement(1807643..1808458) /locus_tag="lmo1738" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985565" CDS complement(1807643..1808458) /locus_tag="lmo1738" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter substrate-binding protein" /protein_id="NP_465263.1" /db_xref="GeneID:985565" /translation="MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLD DSFVPMGFRDKDDNLVGFDIDLAKAVFAEYGIKAKFTPIDWTMKESELKNGSIDLIWN GYTVTDARKKQVAFSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAK KPEVLTDIINNNEPELYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNII TGGFDATDFAVGMRKSDKELQKKINEAFEKLYKEGKMQEISKKWFGDDEIAKQ" misc_feature complement(1807667..1808359) /locus_tag="lmo1738" /note="Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily; Region: PBP2_AatB_like; cd00996" /db_xref="CDD:270217" gene complement(1808460..1809107) /locus_tag="lmo1739" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985571" CDS complement(1808460..1809107) /locus_tag="lmo1739" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter ATP-binding protein" /protein_id="NP_465264.1" /db_xref="GeneID:985571" /translation="MLEIKNLSKKFDQKTILDNVNITLQDGEILSIVGPSGGGKTTLL RCISGLEKMDAGEILIDGEKIDPMSRKDVENTIGVVFQEFHLFPHLSVLDNLILAPTL ARKTKKADAVKEAERLLGLLDLADKANSMPYQLSGGQKQRVAIARALAMNPKVLLFDE PTSALDPDLRDHVAALILSLKKVGITQIIVTHDHTFAEKVADQMMEVEPLKKEAI" misc_feature complement(1808493..1809107) /locus_tag="lmo1739" /note="ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; Region: GlnQ; COG1126" /db_xref="CDD:440743" regulatory complement(1808468..1808473) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1739" regulatory complement(1809116..1809121) /regulatory_class="ribosome_binding_site" gene complement(1809118..1809759) /locus_tag="lmo1740" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985563" CDS complement(1809118..1809759) /locus_tag="lmo1740" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter permease" /protein_id="NP_465265.1" /db_xref="GeneID:985563" /translation="MDYIMEILPALLDGAKTTLLVFAVTLVCSIPLGAVVAVGNISKI APLKFILNIYIWIMRGTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEI FRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVY ILGIGDLLRAGKIAMSRDVTLIPLVLVAAIYLALTAILTVLFKQLEKRFSYYK" misc_feature complement(1809121..1809759) /locus_tag="lmo1740" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" regulatory complement(1809768..1809773) /regulatory_class="ribosome_binding_site" gene 1809817..1810057 /locus_tag="lmos66" /db_xref="GeneID:18245151" misc_RNA 1809817..1810057 /locus_tag="lmos66" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245151" regulatory complement(1810121..1810150) /regulatory_class="terminator" gene complement(1810157..1811197) /locus_tag="lmo1741" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985955" CDS complement(1810157..1811197) /locus_tag="lmo1741" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="NP_465266.1" /db_xref="GeneID:985955" /translation="MNWWSYLKDKRFFLLFFCSIMFFVGVLISIDPNSKLTLGNFIYL YVFVLVFLLSYLVLGYFFKYSYWREMKELVSGEIEENIIELLPKPRTREQAFFNQLMA KKHKEELRTISKLQDKQQEYHDFILYWVHEVKTPVVASKMLINNPDLNDTETIFKQID EELTTIDKLVMQALYFSRLDTFSKDYFIQEQNLGVVVRESVKRHSKLFIGKKMKLDLQ NVDMDVRTDSKWLGFILDQILSNALKYTKSGGEVKIWCDTEASGKKVLHMKDNGRGIK EEDLPRVFEQGFTGNIGRQEKKATGMGLYLAKQMAKKLGHEICIQSESGVGTEVKIYF EQKDDYLLIAKD" misc_feature complement(1810196..1811161) /locus_tag="lmo1741" /note="Signal transduction histidine kinase [Signal transduction mechanisms]; Region: BaeS; COG0642" /db_xref="CDD:440407" misc_feature complement(1810196..1810522) /locus_tag="lmo1741" /note="Histidine kinase-like ATPase domain; Region: HATPase; cl00075" /db_xref="CDD:469604" misc_feature complement(order(1810208..1810210,1810214..1810219, 1810232..1810234,1810238..1810240,1810286..1810297, 1810376..1810378,1810382..1810384,1810388..1810390, 1810394..1810396,1810466..1810468,1810475..1810477, 1810487..1810489)) /locus_tag="lmo1741" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:340391" misc_feature complement(order(1810286..1810288,1810346..1810348)) /locus_tag="lmo1741" /note="ATP-lid; other site" /db_xref="CDD:340391" regulatory complement(1811204..1811209) /regulatory_class="ribosome_binding_site" gene complement(1811219..1812961) /gene="adeC" /locus_tag="lmo1742" /db_xref="GeneID:985560" CDS complement(1811219..1812961) /gene="adeC" /locus_tag="lmo1742" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="adenine deaminase" /protein_id="NP_465267.1" /db_xref="GeneID:985560" /translation="MVENLKQLQERVAVSDGRAKADLVIKNGRIINVFSGEIMDGDIA IKNGYIAGIGSFPDAEKIIDAAGAFIAPGFIDAHVHVESAMVTPAEFARVLLPNGVTT IVTDPHEIANVAGEKGIEFMLEDAKGAPLDMFVMLPSSVPATEGEHNGETLHAEKLHP LYRHEKVIGLAEVMDFPSVAKGSDDILRKIIDAKKEGGRIDGHGAGLTSADLNNYLAV GIRTDHESTTAKEATDRLRAGMFVMLREGTVGRDLLQTIPAVSEKNSHRFCFCTDDKL INDLITEGSINYNIKLAIKNGIDPITAIQMATINAANCHNLPYLGAVAAGYQADIVFL TDIETVEISKVLKNGEVVVDNGVRNEAAFKQQAAVPFVSPPINHHVHLQDLALPLTKE TCYVIGMQPNSLFTEKRIEQVTIQGGKFVPTVENDLLKMAVVERHHDTGCVGVGIVKG FGLTEGAIATTVAHDSHNIVAVGVSDEAMKAAIDHITQTGGGIAVVNGAGQVLHDLAL PIAGLLSDKSYEEVENDLAGLLNAFKQISTANGFDPFLTLSFLTLPVIPELKLTDQGL FDFATFQIISNEVN" misc_feature complement(1811240..1812913) /gene="adeC" /locus_tag="lmo1742" /note="Adenine deaminase [Nucleotide transport and metabolism]; Region: AdeC; COG1001" /db_xref="CDD:440625" regulatory complement(1812968..1812973) /regulatory_class="ribosome_binding_site" gene complement(1812978..1813436) /locus_tag="lmo1743" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986834" CDS complement(1812978..1813436) /locus_tag="lmo1743" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1743" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465268.1" /db_xref="GeneID:986834" /translation="MLNFEEKKALIESINGFELHEISMGRINVHYPASKRDKKIIVKH LHPNGNAFVYAPFLEVEPLDKQGYVNVKDYSENEIRVLLLEAKEFMDSDEDGYKEGLT KIYQDNSGEKLSLVYENKMWVIYTGENLEAVFPTLESAEGYLLDEGFFEA" regulatory complement(1813449..1813453) /regulatory_class="ribosome_binding_site" gene complement(1813457..1814332) /locus_tag="lmo1744" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985378" CDS complement(1813457..1814332) /locus_tag="lmo1744" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465269.1" /db_xref="GeneID:985378" /translation="MKILVFGGTRFFGKKLVERLVSEGHDVTIGTRGKTEDNFGDTVK RVVLNRESRDALFQLAKEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVYS QKGRALVEADFNPEHYEIVIGDKEDFDYGEGKRLAEAVFFQKASFPVVAVRFPIVLGL DDYTKRLHFHINHIKNHQEIGISNGQAEIGFITSDEAAHFLEWVGVESDLTGPVNATS NGTYALNGFIKMLEEKIGELALVEEVTDDVDDSPFGIEKTYYLDNAKATEAGFVFNDL KVWLPALVTDILKEN" misc_feature complement(1813589..1814332) /locus_tag="lmo1744" /note="atypical (a) SDRs, subgroup 1; Region: SDR_a1; cd05265" /db_xref="CDD:187575" misc_feature complement(order(1813862..1813873,1813931..1813933, 1813943..1813945,1814042..1814050,1814150..1814155, 1814234..1814242,1814297..1814299,1814303..1814308, 1814312..1814314)) /locus_tag="lmo1744" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187575" misc_feature complement(order(1813931..1813933,1813943..1813945, 1814042..1814044,1814102..1814104)) /locus_tag="lmo1744" /note="active site" /db_xref="CDD:187575" regulatory complement(1814340..1814345) /regulatory_class="ribosome_binding_site" gene complement(1814403..1815080) /locus_tag="lmo1745" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985561" CDS complement(1814403..1815080) /locus_tag="lmo1745" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_465270.1" /db_xref="GeneID:985561" /translation="MVKVYIVEDDEVIRDTIRKHLSKWGFEIGVVEDFNNILQEFLAF EPQLVILDVNLPFFDGFYWCNQIREVSNVPIIFLSSRNSRMDQIMGMNMGADYYIEKP VDLDVLMARINALLRRTYSYADLEEANVMEHNNVFLHIDTNTLTHLEDKIELTKNEFL ILYELMKQKGSIVSRDEIMRALWEDESFVDDNTLTVNVVRIRKKLAEIGLSEFIKTKK GQGYMIE" misc_feature complement(1814433..1815080) /locus_tag="lmo1745" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" regulatory complement(1815089..1815094) /regulatory_class="ribosome_binding_site" gene complement(1815143..1817122) /locus_tag="lmo1746" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985569" CDS complement(1815143..1817122) /locus_tag="lmo1746" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_465271.1" /db_xref="GeneID:985569" /translation="MLFKVALTNMRKNFNQYIVYFVSLIVCVLVFFTFVSLSYNPLID TVFKRWELFGPAMFSSASLMLILFIIFFIFYSNSFFLKRRKREIGLYSLLGLRKSQIV LVLFFENAMLYMLATIFGVLIGIFSSKLFAMVLFWIVGLAIDAEFIISFKAIIDTMLV FFGIMLFTSVYAVFLVLRYNLNQLFKNDEKEEKVAKGSLVFMLIGLALIAFGYYVATR NIEESPIWLAYGFFDLILVILACVILGTWLMVRFGTPYVIRQLYNNKRFFYKGTNVLG ITSLRFRLKKNASTIAMIAVLSATTLTIIGSMSSFYVRTINDISAENPSSYQVLNISA KNEKEIIQTIHDDQDHKLKKLMQAEMLSAEVEYKDIPKYKMHMDTFIHTIVSESEYNR IGERQQSDFVQSKKIAYGEAILLGKNTYYARPDIQEKWLTRKMVVQSNKSAAKKMPPI KVVDFRENSIFNTGISYETLVVSDEYYDDLERLFRPESVTMFDITNPNHSESLDKKVQ TIVDGEPSLFSDNVSSYYTNYHLISTVVGSLLFIGIFIGIVFFLATGSIIYFKLVTDA VSEKGKFEILFKLGVTEKEIRKIISKQVWPIFVIPLFFGIAHSMAALWGISINLMDNI KYPVLIGTGIYIVCYTAYYFLCINSFTKIVMANKK" misc_feature complement(1816580..1816900) /locus_tag="lmo1746" /note="FtsX-like permease family; Region: FtsX; pfam02687" /db_xref="CDD:460652" misc_feature complement(<1816202..>1816885) /locus_tag="lmo1746" /note="Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport and catabolism]; Region: YbbP; COG3127" /db_xref="CDD:442361" gene complement(1817112..1817879) /locus_tag="lmo1747" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985559" CDS complement(1817112..1817879) /locus_tag="lmo1747" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465272.1" /db_xref="GeneID:985559" /translation="METVLKAHKVRKVYGSKGNLFSALGSISLEIQKGSFVGIMGPSG AGKSTLLNVLSSIDKPTSGEIEIGGKQISTMNGKELAVFRRDQLGFIFQDYNLLDTMT VKDNIVLPLALAHIKQAEIDQRFEIIARQFGIFELRNKYPTEISGGQKQRTAVCRAMI TEPTLIFADEPTGALDSKSATNLLEGLSQAKDVRDSTIMMVTHDAFAASYCERIMFIK DGEIFTEIYRGTSSRKQFFQKVLDVLALLGGGENDVI" misc_feature complement(1817202..1817879) /locus_tag="lmo1747" /note="ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]; Region: LolD; COG1136" /db_xref="CDD:440751" regulatory complement(1817134..1817139) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1747" regulatory complement(1817886..1817891) /regulatory_class="ribosome_binding_site" regulatory complement(1817968..1817997) /regulatory_class="terminator" gene complement(1818007..1818516) /locus_tag="lmo1748" /db_xref="GeneID:986669" CDS complement(1818007..1818516) /locus_tag="lmo1748" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1748" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465273.1" /db_xref="GeneID:986669" /translation="MIENELEHAKKTEKIEFGVNRRLIFSSCLLWMAVGLLLYVVFSH IKGVNGIEEMILLVFIGLCVLRPLFRLINIAPTVELTERGVAYRGDFKSWNEIKKTEL KKPAMMLFSQGRLIIMTSINGREEVAWDIVAADVSISLEELEKLIQSMRSTYTDDETI GMEIFVEKK" regulatory complement(1818523..1818528) /regulatory_class="ribosome_binding_site" gene 1818740..1819213 /locus_tag="lmo1749" /db_xref="GeneID:986346" CDS 1818740..1819213 /locus_tag="lmo1749" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="shikimate kinase" /protein_id="NP_465274.1" /db_xref="GeneID:986346" /translation="MGAGKTTVGNILANLADLPYIDIDEVITSEQGMSVSDIFAKYGE KEFRRLEHEKLKELATTKAVIATGGGIVLNPENREVLKNTYPVIYLETDPEVFMNRLK GDTTRPLVQQKTAEEIRAIFEPRIAHYQDSADFIVNTDNRNQQEVAQTILTMLDK" misc_feature 1818740..1819210 /locus_tag="lmo1749" /note="Shikimate kinase [Amino acid transport and metabolism]; Region: AroK; COG0703" /db_xref="CDD:440467" regulatory 1819219..1819238 /regulatory_class="terminator" regulatory complement(1819219..1819238) /regulatory_class="terminator" gene complement(1819244..1819798) /locus_tag="lmo1750" /db_xref="GeneID:985557" CDS complement(1819244..1819798) /locus_tag="lmo1750" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465275.1" /db_xref="GeneID:985557" /translation="MAITMYIDQPGATLNRETTHPHFNEHFKASFYLDEQDSYGPFGY EDGLEVLRRLEEYFSDKSDQGLNLSSFPKYMMETVKKASYVPAKDDDVERLKQLLVEF GSDVRASDRITVSAALAQIKITGYVLPALRDAALESLHREIELNKIENIDAGYADSMF YDLLTFTKDYTSVLPGMWCRHCTE" misc_feature complement(1819292..1819792) /locus_tag="lmo1750" /note="Uncharacterized conserved protein YfeS, contains WGR domain [Function unknown]; Region: YfeS; COG4884" /db_xref="CDD:443912" regulatory complement(1819807..1819812) /regulatory_class="ribosome_binding_site" regulatory complement(1820098..1820121) /regulatory_class="terminator" gene complement(1820133..1821494) /locus_tag="lmo1751" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985554" CDS complement(1820133..1821494) /locus_tag="lmo1751" /experiment="EXISTENCE:[PMID:19448609]" /note="Uncharacterized RNA methyltransferase lmo1751" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465276.1" /db_xref="GeneID:985554" /translation="MEASLLKKNQSIELTIEDLTHDGSGVGKIDGYPFFIPNTLPGEK VTAKIIKLNKNYGFARMENIETVSANRVEPPCAVYSKCGGCSLQHLSYDGQLEFKRNQ VEETMKRIGKLNVEVPETLGMENPWRYRNKSQVPVGFVNGKLTAGFYQKRSHAIIDMS TCLIHNEQGDFAVQKTREILAKYGTEPYDEQTGKGDIRHIMTRFAHTTGQLMIVLVTT KERMPFKEEIVRDLVEQLELTSIVQNINPHKTNVIFGDRTKTLWGKDIIEDTIHGIRF AISARSFYQVNPLQTEVLYQQAIDAAELTGEETVIDAYCGIGSISLCLAKKAKHVYGV EIVDQAIQDARANAELNELANTTFETGKAEEVIPSWYKAGIVADVLVVDPPRKGCDEK LLETILAMKPKKVVYVSCNPGTLARDMKILTDGGYVAKKVQPVDMFPMTTHIEAVTVL HLN" misc_feature complement(1820160..1821440) /locus_tag="lmo1751" /note="23S rRNA (uracil-5-)-methyltransferase RumA; Region: rumA; TIGR00479" /db_xref="CDD:129571" regulatory complement(1821503..1821508) /regulatory_class="ribosome_binding_site" gene complement(1821518..1822273) /locus_tag="lmo1752" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985556" CDS complement(1821518..1822273) /locus_tag="lmo1752" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1752" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465277.1" /db_xref="GeneID:985556" /translation="MTSGHQFKRFTMIIIVLIIAIAAAVFFFWQVDAEEQAPKVSKTE LIESNKVWINNQMQIPIQDKIILSIPATNTNTTIASNGDLILETTNEEILKELASSDN RYKDIKAYRLRIEAKKVSEYITNTKYRYPTTTIQKKFANYEITSGERSVQTEKTPVQI EETTNNDIKVSLNTSYSSDDAEVAADIFNSQIPEETTITDNTKNLITNKNVTIYPKTF VYDFTLQKNTMLVFKEQEEAVIKEPIGIEYIIK" regulatory complement(1822281..1822286) /regulatory_class="ribosome_binding_site" regulatory complement(1822401..1822418) /regulatory_class="terminator" gene complement(1822421..1823353) /locus_tag="lmo1753" /db_xref="GeneID:985555" CDS complement(1822421..1823353) /locus_tag="lmo1753" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="lipid kinase" /protein_id="NP_465278.1" /db_xref="GeneID:985555" /translation="MQKHARVIYNPTSGREIIKKNLADVLSILEQAGYVTSAHATTAE PDDAKHAAEEAVRNRFDLVVAAGGDGTINEVINGIAEKEYRPKVGIIPTGTTNDFARA LHVPRDVIKATKIIAAGQSVAMDIGKANETYFINIGGGGRLTELTYDVPSRLKTMLGQ LAYYLKGIEMLPSLKATKVKVEYDQGVFEGEVMFFLLGLTNSIGGFEKIAPDAKLDDG KFSLIIVKKVNLAEFIRLVTLALRGDHIKEPNVIYVKSEKVIVNSEDKMLINLDGELG GETPMEFRNLRQHIEFFASVDDIPATDLFIKENS" misc_feature complement(1822436..1823350) /locus_tag="lmo1753" /note="putative lipid kinase; Reviewed; Region: PRK13337" /db_xref="CDD:183982" regulatory complement(1823363..1823368) /regulatory_class="ribosome_binding_site" regulatory complement(1823463..1823486) /regulatory_class="terminator" gene complement(1823494..1824924) /gene="gatB" /locus_tag="lmo1754" /db_xref="GeneID:985551" CDS complement(1823494..1824924) /gene="gatB" /locus_tag="lmo1754" /experiment="EXISTENCE:[PMID:19448609]" /note="allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA amidotransferase subunit B" /protein_id="NP_465279.1" /db_xref="GeneID:985551" /translation="MNFETVIGLEVHVELKTNSKIFSSAPAHFGAEPNTNTTVVDLGM PGVLPVLNKRAVEFGMKAAMAINCEIAEHTKFDRKNYFYPDNPKAYQISQFDKPIGEH GWIEIEVGGKKKKIGITRLHLEEDAGKNTHTSHGYSLVDINRQGTPLIEIVSEPDIRS AEEAYAYLEKLKSIIQYTGVSDVKMEEGSMRCDANISIRPIGQEEFGVKTELKNLNSF NNVRKGIEYEEKRQAEVLKSGGIIEQETRRFEEATGKTSLMRIKEGSDDYRYFPEPDL VDLFIDDAWKERIRAEIPELPDKRQIRYINDLGLPAYDAMVLTLTKEMSDFFEATLVA GADAKQASNWLMGEVSAYLNAEQKELHETGLTPENLAGMIKLIEAGTISSKIAKKVFR ELAQNGGDAEQVVKDKGLVQISDEGALRTIISEILDNNEQSIVDFKNGKDRAVGFLVG QVMKATKGQANPPMVNKLLLEEMNKR" misc_feature complement(1823500..1824924) /gene="gatB" /locus_tag="lmo1754" /note="Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit [Translation, ribosomal structure and biogenesis]; Region: GatB; COG0064" /db_xref="CDD:439834" regulatory complement(1824932..1824937) /regulatory_class="ribosome_binding_site" gene complement(1824936..1826387) /gene="gatA" /locus_tag="lmo1755" /db_xref="GeneID:985546" CDS complement(1824936..1826387) /gene="gatA" /locus_tag="lmo1755" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA amidotransferase subunit A" /protein_id="NP_465280.1" /db_xref="GeneID:985546" /translation="MGLFDFSVKELHDKLVKKEISPFDLVSESFNRIESVEDKVGSFI TLNKEAAFGVAEELGDAGIDPNNMLAGLPIGIKDNIVTKNLRTTAASKILENFDPIYD ATVVSKLKNAQTINIGKLNMDEFAMGSSTETSYFHKTHNPWDLSRVPGGSSGGSASAV AAGEVLFSLGSDTGGSIRQPAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNV EDNAYLLEAISGLDANDSTSINQPVERFSDSLTGDIKGLRIGVPKEYLAEGVDPGVKQ AVLDALKTLEKLGATWDEVSLPHSEYGVASYYILASSEASSNLSRFDGVRYGYRSPNA TTLEELYTKTRSEGFGDEVKRRIMLGTYALSSGYYDAYYKKAQQARTLIKQDFINVFE NYDVIIGPSSPTTAFKIDGMINDPITMYSNDILTVPINLAGVPAISVPCGFSDGLPVG LQIIGNYFEESLLYKVAHAFEQETTFHKEKPNL" misc_feature complement(1824969..1826357) /gene="gatA" /locus_tag="lmo1755" /note="aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; Region: gatA; TIGR00132" /db_xref="CDD:272925" regulatory complement(1826397..1826402) /regulatory_class="ribosome_binding_site" gene complement(1826411..1826704) /gene="gatC" /locus_tag="lmo1756" /db_xref="GeneID:985549" CDS complement(1826411..1826704) /gene="gatC" /locus_tag="lmo1756" /experiment="EXISTENCE:[PMID:19448609]" /note="allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA amidotransferase subunit C" /protein_id="NP_465281.1" /db_xref="GeneID:985549" /translation="MSNISKETVEKVANLAKLEVSETEATAFAGQLGKIIELVEQLNT LDTTNVEPTSHAIDVSNVLREDVATKGLDRKEVLKNAPDEQDGMFKVPTIMEQ" misc_feature complement(1826417..1826704) /gene="gatC" /locus_tag="lmo1756" /note="Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit [Translation, ribosomal structure and biogenesis]; Region: GatC; COG0721" /db_xref="CDD:440485" regulatory complement(1826713..1826718) /regulatory_class="ribosome_binding_site" gene complement(1826829..1827944) /locus_tag="lmo1757" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987885" CDS complement(1826829..1827944) /locus_tag="lmo1757" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465282.1" /db_xref="GeneID:987885" /translation="MKKLIIAALGLTLVLSGCAPKLDSNDKVVQKDDSKAETGIMTKN QISSNYYKTVLPYKASKSRGLVVSNIYSRYDINELESGLMRVSQNKYSPDNYLFQEGQ YLDKETLEKWLDRKSDKNPNGLNPASNGNGENRKPIYLAHILEQDYLKQTDKDTVALG GISIALAMNSVDYYQKEKYGDTYEQPISDSELLAQGKEMSATVLNRIRQTKGLENVPV TIAIYKQGARDAVAPGNYIAYATANGDSLSNWKDIDEKNYVLPSTESAKDHKTDNDNF LNFKKAIEDYYPNFTGVVGRGRYEDGQLAELNIDIPLQFYGEAEIIGFTQYVTDLVGQ HIPKTADLQVNISTSDGPAALITRKANEDAATAHIYD" misc_feature complement(1826832..1827944) /locus_tag="lmo1757" /note="Uncharacterized conserved protein involved in sex pheromone biosynthesis [General function prediction only]; Region: CamS; COG4851" /db_xref="CDD:443879" gene complement(1827941..1829956) /gene="ligA" /locus_tag="lmo1758" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985988" CDS complement(1827941..1829956) /gene="ligA" /locus_tag="lmo1758" /EC_number="6.5.1.2" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="NAD-dependent DNA ligase LigA" /protein_id="NP_465283.1" /db_xref="GeneID:985988" /translation="MADKKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKI EEAHPEWVTPESPSKRVGGEVLEGFKKVAHDTPMLSLANAFNHEDLADFDRRIRDKVG DDIAYMCELKIDGLAVSLQYENGKYKQGATRGDGTIGEDITANLRTIRSIPMKLQKDY SIEVRGEAFMPKRSFQKLNEIREEEGQMLFANPRNAAAGSLRQLDTKIAASRNLDIFL YAVADFGEMGVETHSAGLDMLETLGLKVNKERRLCSSLEEVYAYIDEWTEKRADLAYD IDGIVLKLNNLEQQRQMGTTVKSPRWSIAYKFPAEEVPTKLLDIELNVGRTGVITPTA VLEPVRVAGTTVSRASLHNEDLITEKDIRIGDTVLIKKAGDIIPEVIKSITEERSGSE EPFHMPKKCPTCDSELVRLEEEVALRCINPKCPAQIKEGLIHFVSRNAMNIDGLGEKV IIQLFSQHLIKDVADLFFLSKEKLLELERMGEKSVTNLLASIEASKQNSLEKLLFGLG IRHVGAKAAKSLAVHFETMDNLKVADKETLTSINDIGEKMADSIVTYFANEEVHDLLE ELKRAGVNMTYTGPKLEDMSEEELVFAGKTVVLTGKLEKLTRNDAKALIESLGGNVSG SVSKKTDVVVAGSDAGSKLAKAEELAIPIWSEEDLIEYLPDEGGLNE" misc_feature complement(1827968..1829947) /gene="ligA" /locus_tag="lmo1758" /note="NAD-dependent DNA ligase [Replication, recombination and repair]; Region: Lig; COG0272" /db_xref="CDD:440042" regulatory complement(1827954..1827959) /regulatory_class="ribosome_binding_site" /gene="ligA" /locus_tag="lmo1758" regulatory complement(1829966..1829971) /regulatory_class="ribosome_binding_site" gene complement(1829982..1832177) /gene="pcrA" /locus_tag="lmo1759" /db_xref="GeneID:985986" CDS complement(1829982..1832177) /gene="pcrA" /locus_tag="lmo1759" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase" /protein_id="NP_465284.1" /db_xref="GeneID:985986" /translation="MNAKELVDGLNPEQRRAVESTEGPLLIMAGAGSGKTRVLTHRIA YLVRERGVNPYNILAITFTNKAAREMKSRIGNLMGGEAESIWISTFHSMCVRILRRDI DRIGYERNFTILDGSDQLSVIKGILKEKNVDPKKFEPRGILASISNAKNELITASEYI KEASGFYDKMVGEVYEKYEKKLKKNQALDFDDLIMVTIQLFERVPDVLEYYQRKFQYI HVDEYQDTNHAQYLLVKQLASRFKNLCVVGDSDQSIYGWRGADISNIMSFEKDYPNAK TILLEENYRSTKRILEAANRVIENNGNRKPKNLWTSNAEGKKIFYHKALTEKEEAAYV VMKIQEEVNNSNRPLSDFAILYRTNAQSRVMEEYFMKSNMAYTMVGGTKFYDRKEIKD ILAYLRLISNNEDDISLTRIVNVPKRGVGPGTLDKLNNVATTYDLSLFEVLNRIELAG ISPKISKDLVAFHDLIRGFTQMQDFLSVTELVEEILEKTGYRAMLKNERTIEAQTRLE NIDEFLSVTQNFEKENDDKTLIAFLTDLALVADVDKLEEDNEEQNGAVTLMTLHSAKG LEFPVVFLVGMEEGIFPHSRAIYEEDEMEEERRLAYVGITRAEEELFLTSAYSRMLYG RPSSNQESRFIGEIPRDLLELGNENKLKADKPYAKPRIPQKTTTAYKSSGAETLGWTV GDKASHKKWGVGTVVSVKGEGSGMELDIAFPSPTGVKRLLAEFAPIEKV" misc_feature complement(1829991..1832162) /gene="pcrA" /locus_tag="lmo1759" /note="ATP-dependent DNA helicase PcrA; Region: pcrA; TIGR01073" /db_xref="CDD:273429" regulatory complement(1832184..1832189) /regulatory_class="ribosome_binding_site" gene complement(1832242..1832919) /locus_tag="lmo1760" /db_xref="GeneID:985989" CDS complement(1832242..1832919) /locus_tag="lmo1760" /experiment="EXISTENCE:[PMID:19448609]" /note="PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer" /codon_start=1 /transl_table=11 /product="geranylgeranylglyceryl phosphate synthase-like protein" /protein_id="NP_465285.1" /db_xref="GeneID:985989" /translation="MKHLFKLDPAKNLPTNDVTKLIHSGTDGFIIGGTDNVQIEAVQN LYELLVETDLPIFLEISNESMILPEADHFLIPVVLNTENSKWTHGLHKELIKEMGEFI PWKRVTSEGYVILNKDAKVAHLTEAKTDLTDEDIVAYARLAENIFHLPIFYVEYSGMY GDPEVVRKASAALSNTKFWYGGGIRSKEQAAEMAKYADTIIVGNIIYEDLEKALETAT IFRKKTV" misc_feature complement(1832269..1832916) /locus_tag="lmo1760" /note="PcrB_like proteins. One member of this family, a protein from Archaeoglobus fulgidus, has been characterized as a (S)-3-O-geranylgeranylglyceryl phosphate synthase (AfGGGPS). AfGGGPS catalyzes the formation of an ether linkage between...; Region: PcrB_like; cd02812" /db_xref="CDD:239206" misc_feature complement(order(1832308..1832310,1832371..1832379, 1832446..1832448,1832455..1832457,1832461..1832463, 1832902..1832904)) /locus_tag="lmo1760" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:239206" misc_feature complement(order(1832449..1832451,1832455..1832457, 1832461..1832463,1832818..1832820,1832896..1832898)) /locus_tag="lmo1760" /note="putative active site [active]" /db_xref="CDD:239206" misc_feature complement(order(1832416..1832418,1832485..1832487, 1832494..1832496,1832506..1832511,1832518..1832520, 1832632..1832634,1832644..1832646,1832656..1832658, 1832668..1832670,1832683..1832685)) /locus_tag="lmo1760" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:239206" regulatory complement(1832925..1832930) /regulatory_class="ribosome_binding_site" regulatory 1833109..1833114 /regulatory_class="ribosome_binding_site" gene 1833125..1834480 /locus_tag="lmo1761" /db_xref="GeneID:985984" CDS 1833125..1834480 /locus_tag="lmo1761" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sodium-dependent transporter" /protein_id="NP_465286.1" /db_xref="GeneID:985984" /translation="MQENREEWGSKVGFILASAGSAIGIGAIWKLPYVAATAGGGAFF LLFLVLTLLVVMPLLIAEFVIGRGSGGDAVQAYKTLAPGTKWSLLGKLGVVGASILFS FYSVVGGWIITYLIKTLAGGIAGENQASLLHDFQVTTANPWISVGATILFILLNVIVI SRGVVSGIEKMSKFMMPALFILFIVLIIRSLTLPGAMEGVAFFLRPDFSHFTAQTVLI TLGQAFFSLSVGISVMVTYSSYLNRSTSLPQSAISVSLMNVFVSLLAGLAIFPAAFSF NITPDAGPGLLFVILPSIFNQMPFGMLFFIIFLILFLFAALTSSFSMLEATVAPLMNA GVNRKKASLWMGLVIVLMAIPSALSFGVWSDVQIFGLSIFDAADYLVSNIILPVGALF IAIFVGYRLPRELLLKEFTTSSHFGKKVFIVWLFLIKYIAPIAIILVFLSATGLIDFL F" misc_feature 1833140..1834453 /locus_tag="lmo1761" /note="solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain; Region: SLC6sbd_Tyt1-Like; cd10336" /db_xref="CDD:271367" misc_feature order(1833182..1833184,1833191..1833193,1834067..1834069, 1834076..1834081) /locus_tag="lmo1761" /note="Na binding site 2 [ion binding]; other site" /db_xref="CDD:271367" misc_feature order(1833185..1833190,1833194..1833205,1833434..1833436, 1833797..1833802,1833815..1833817,1833821..1833823, 1834079..1834081,1834088..1834093) /locus_tag="lmo1761" /note="putative substrate binding site 1 [chemical binding]; other site" /db_xref="CDD:271367" misc_feature order(1833188..1833190,1833203..1833205,1833800..1833802, 1833896..1833898) /locus_tag="lmo1761" /note="Na binding site 1 [ion binding]; other site" /db_xref="CDD:271367" misc_feature order(1833209..1833214,1833431..1833433,1833443..1833445, 1833452..1833454,1833974..1833976,1833986..1833988) /locus_tag="lmo1761" /note="putative substrate binding site 2 [chemical binding]; other site" /db_xref="CDD:271367" regulatory complement(1834489..1834517) /regulatory_class="terminator" gene complement(1834523..1834777) /locus_tag="lmo1762" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985983" CDS complement(1834523..1834777) /locus_tag="lmo1762" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1762" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465287.1" /db_xref="GeneID:985983" /translation="MKKFNSKTYQIVIISILALAVIYFVINMISTGTGLDFSLLWHWV FIICFIFTTLANVREKRAIGTAIGLSGILICVTSIVLMAI" regulatory complement(1834782..1834787) /regulatory_class="ribosome_binding_site" gene complement(1834795..1835091) /locus_tag="lmo1763" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985981" CDS complement(1834795..1835091) /locus_tag="lmo1763" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465288.1" /db_xref="GeneID:985981" /translation="MQIEKLRGQGLDEFFQGILTLENLEECYAFFDDVCTVNEIQSMA QRFQVAKMLHDGKTYNVIESETGASTATISRVKRSLHYGNDMYDVVFSRMTKPE" misc_feature complement(1834813..1835073) /locus_tag="lmo1763" /note="TrpR-related protein YerC/YecD; Region: yecD_yerC; TIGR02531" /db_xref="CDD:188231" regulatory complement(1835099..1835104) /regulatory_class="ribosome_binding_site" regulatory complement(1835189..1835221) /regulatory_class="terminator" gene complement(1835229..1836491) /gene="purD" /locus_tag="lmo1764" /db_xref="GeneID:985980" CDS complement(1835229..1836491) /gene="purD" /locus_tag="lmo1764" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis" /codon_start=1 /transl_table=11 /product="phosphoribosylamine--glycine ligase" /protein_id="NP_465289.1" /db_xref="GeneID:985980" /translation="MNLLVVGSGGREHAISKKLLASNNVEKVFCAPGNDGMRLDDIQL VAISETDKAGLIDFAKKAEIAFVIVGPEVPLLEGVVDALEEAGIKAFGPKANAALIEG SKDFAKQFMEKYAIPTAASRTFTDYAEAKAYLNERGVPIVIKADGLAAGKGVTVALEM EEAVLALKDMMLEEKFGDASLKVVIEDFLAGEEFSLMAFVNGEEVYPMSIAQDHKRAY EGDKGPNTGGMGAYSPVPHISEAVIEEAVQKILLPTAKGMVKEGRYFRGILYAGLILT ADGPKVIEFNARFGDPETQVVLPRLESDFAALIDALLHNEKPDVRFKKTGLTLGVVLA SAGYPEHYEKGNKLTGLNDIAEDVAIYHAGTKQDENGDFISDGGRVLLLAKEAETMSD ARTLLYPEMQKLDNPNFFYRIDIGTKAE" misc_feature complement(1835235..1836491) /gene="purD" /locus_tag="lmo1764" /note="Phosphoribosylamine-glycine ligase [Nucleotide transport and metabolism]; Region: PurD; COG0151" /db_xref="CDD:439921" regulatory complement(1836501..1836506) /regulatory_class="ribosome_binding_site" gene complement(1836516..1838045) /gene="purH" /locus_tag="lmo1765" /db_xref="GeneID:985977" CDS complement(1836516..1838045) /gene="purH" /locus_tag="lmo1765" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in de novo purine biosynthesis" /codon_start=1 /transl_table=11 /product="bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase" /protein_id="NP_465290.1" /db_xref="GeneID:985977" /translation="MKRALISVSDKNGIVPFAEKLVELGVEIISTGGTKAAFEQAGVP VTGIEEVTEFPEMLDGRVKTLHPAIHGGLLARRDTAEHMEAIAAHNIKPIDLVIVNLY PFQETIQKPGVTLEEAIENIDIGGPSMLRSAAKNYAAVTVVVDTADYDAVLTELQEHG ATTFETRQRLAAKVFRHTAAYDALIAEYLTNITGETFPEKVTFTYNRKQVLRYGENPH QDAAFYTEPGTIENSISAAKQLHGKELSYNNIRDADAALKIASEFTEPVAVAVKHMNP CGVGVGENIEEAYLKAYEADETSIFGGIVALNKEVDAKTAEHMSKIFLEIVIAPSFSE EAFAILAKKKNIRLLTVPFAGNMEGFEKTSVNGGLLIQANDSLVEDTTSYEVVTEKQP TDSEMKALLAQWKIVKHVKSNAIVVGSDKQTLGIGAGQMNRIGSALIALEQAGEKAKG AVLASDAFFPMDDTVEAAAKSGITAIIQPGGSIKDKESIAMADKYGISMVLTHVRHFK H" misc_feature complement(1836519..1838045) /gene="purH" /locus_tag="lmo1765" /note="bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional; Region: purH; PRK00881" /db_xref="CDD:234854" gene complement(1838051..1838617) /gene="purN" /locus_tag="lmo1766" /db_xref="GeneID:985978" CDS complement(1838051..1838617) /gene="purN" /locus_tag="lmo1766" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoribosylglycinamide formyltransferase" /protein_id="NP_465291.1" /db_xref="GeneID:985978" /translation="MNIAIFASGSGSNFQALVDDEFIKPYVKLLVCDKPNAYVLERAN KHDIPVFLFEAKNYPDKEAFETEILLELRRLEIDLLVLAGYMRLIGPTLLAEFPEQIV NLHPSLLPEFKGKDAIGQAIQANVSGTGVTAHFVDAGMDTGPIIDQVKVTIETAETTD TLAEKIHQVEHIFYPKVIRGLIQNGGND" misc_feature complement(1838081..1838614) /gene="purN" /locus_tag="lmo1766" /note="Phosphoribosylglycinamide formyltransferase (GAR transformylase, GART); Region: FMT_core_GART; cd08645" /db_xref="CDD:187714" misc_feature complement(order(1838108..1838110,1838195..1838200, 1838207..1838212,1838216..1838218,1838276..1838278, 1838300..1838311,1838336..1838338,1838351..1838374, 1838576..1838584,1838597..1838599)) /gene="purN" /locus_tag="lmo1766" /note="active site" /db_xref="CDD:187714" misc_feature complement(order(1838108..1838110,1838300..1838302, 1838306..1838308,1838366..1838371,1838579..1838584)) /gene="purN" /locus_tag="lmo1766" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:187714" misc_feature complement(order(1838195..1838200,1838207..1838212, 1838309..1838311,1838336..1838338,1838351..1838359, 1838363..1838365,1838372..1838374)) /gene="purN" /locus_tag="lmo1766" /note="cosubstrate binding site; other site" /db_xref="CDD:187714" misc_feature complement(order(1838195..1838197,1838303..1838305, 1838309..1838311)) /gene="purN" /locus_tag="lmo1766" /note="catalytic site [active]" /db_xref="CDD:187714" regulatory complement(1838058..1838063) /regulatory_class="ribosome_binding_site" /gene="purN" /locus_tag="lmo1766" gene complement(1838614..1839663) /gene="purM" /locus_tag="lmo1767" /db_xref="GeneID:985975" CDS complement(1838614..1839663) /gene="purM" /locus_tag="lmo1767" /EC_number="6.3.3.1" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole synthetase" /protein_id="NP_465292.1" /db_xref="GeneID:985975" /translation="MAENAYSKAGVDVEAGYQVVERIKKHVARTERIGAMGALGSFGG MFDLSSLNLKEPVLVSGTDGVGTKLLLAIEADKHDTIGIDCVAMCVNDILAQGAEPLF FLDYIATGKTDPVKMEQIVKGVADGCEQAGAALIGGETAEMPDMYGADDYDLAGFTVG AVEKQKLITEGAVQAGDTLIGIPSSGIHSNGYSLVRKIFFKDNEFTLDAEISELDVPL VEELLKPTRIYVKPVLEVLKEVTVHGITHVTGGGFVENLPRMLTNDLAVKVELGSWPM LPIFDVVKKYGQLNEMEMYEIFNMGIGMVLAVAKSDVEKTLEVLVQNGEAAYVIGEVT TRESNAVIFAGGKKG" misc_feature complement(1838635..1839663) /gene="purM" /locus_tag="lmo1767" /note="Phosphoribosylaminoimidazole (AIR) synthetase [Nucleotide transport and metabolism]; Region: PurM; COG0150" /db_xref="CDD:439920" regulatory complement(1838627..1838632) /regulatory_class="ribosome_binding_site" /gene="purM" /locus_tag="lmo1767" regulatory complement(1839674..1839679) /regulatory_class="ribosome_binding_site" gene complement(1839682..1841109) /gene="purF" /locus_tag="lmo1768" /db_xref="GeneID:985974" CDS complement(1839682..1841109) /gene="purF" /locus_tag="lmo1768" /EC_number="2.4.2.14" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes first step of the de novo purine nucleotide biosynthetic pathway" /codon_start=1 /transl_table=11 /product="amidophosphoribosyltransferase" /protein_id="NP_465293.1" /db_xref="GeneID:985974" /translation="MLAEVKGLNEECGIFGIWDHPNAAEITYYGLHSLQHRGQEGAGI VSTDGEILKGHRNLGLLADVFKHGELDDLKGKAAIGHVRYATAGQKNLGNVQPFLFHF HSSSLALAHNGNLVNAKSLRRELEEEGAIFQTSSDTEVLAHLIKRSHTGDFVEDLKVA LNKVKGGFAYMLLTEDTMYAALDPNGFRPLSIGRIGDSYVVASETCAFETVGAEFVRD VEPGELIIINDDGLRIEKFTENVKHSICSMEYIYFARPDSNIAGINVHSARKRSGKRL AKEAFIDADVVTGVPDSSISAAIGYAEEAGLPYELGLIKNRYVARTFIQPSQELREQG VRMKLSAVRGVVEGKRVVMIDDSIVRGTTSKRIVQLLREAGAAEVHVRIASPPLAYPC FYGIDIQTRNELIASNYSVDEICRIIGADSLEYLSEEGLVDSIGRPYPNEPYGGLCMA YFNGDYPTPLYDYEAEYLASLEAEK" misc_feature complement(1839706..1841094) /gene="purF" /locus_tag="lmo1768" /note="Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]; Region: PurF; COG0034" /db_xref="CDD:439804" gene complement(1841094..1843313) /gene="purQ" /locus_tag="lmo1769" /db_xref="GeneID:985972" CDS complement(1841094..1843313) /gene="purQ" /locus_tag="lmo1769" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine synthase II" /protein_id="NP_465294.1" /db_xref="GeneID:985972" /translation="MPNMEPTTKEIKEQKIYQEMGLTDSEYELVCSILGREPNYTETG LFSVMWSEHCSYKNSKPVLRKFPTEGKQVLQGPGEGAGIVDIGDGLGVAFKVESHNHP SYVEPYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGELDTPHAKYLVSEVVAGIAGY GNSIGIPTVGGEIQFDPCYTKNPLVNAMCVGLIEAKDIQKGQAKGIGNPVMYVGAKTG RDGIHGATFASVEFSEEGEQQRSAVQVGDPFMEKLLLEACLDVIRDHSDILVGIQDMG AAGLVSSSSEMASKAGAGLELIMDDVPQRELHMTPYEMLLSESQERMLLCVKKGHVEE IQALFERYGLEAVVIGQVTDDKMYKIIHHGEVVANVPVDALAEDAPVYHKPSKEPTRY QAFQEEEAFVPAMDDVVGVWKELLAQPTIASKRHIYEQYDYQVRTDTAVVPGSDAAIV RVRGTEKAIAMTTDCNSRYLYLDPEVGGAIAVAEAARNIVCSGGKPLAITDGLNFGNP EKPEIFWEIEKAADGISAACLELDTPVISGNVSLYNETDGTGIYPTPVIGMVGLVEDL AHITTQDFKNSGDVIFLIGETKAEYSGSELQKLQQGKISGRAPELDLVTEKKYQQLLL TAIQEGLVASSHDLAEGGFGVALAEATFKAGLGAEVEVPFALNQLFSESQSRFLVSVK PENEAAFAQLMELEKVYRLGVVTEDDTIRVKHKEDQVTAKTTELRSIWEGAIPCLLK" misc_feature complement(1841097..1843286) /gene="purQ" /locus_tag="lmo1769" /note="phosphoribosylformylglycinamidine synthase subunit PurL; Region: PRK01213" /db_xref="CDD:234921" regulatory complement(1841117..1841122) /regulatory_class="ribosome_binding_site" /gene="purQ" /locus_tag="lmo1769" gene complement(1843306..1843989) /gene="purL" /locus_tag="lmo1770" /db_xref="GeneID:985306" CDS complement(1843306..1843989) /gene="purL" /locus_tag="lmo1770" /EC_number="6.3.5.3" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine synthase I" /protein_id="NP_465295.1" /db_xref="GeneID:985306" /translation="MKFAVIQFPGSNCDLDMLHAIRDSLGEEAEYIWHAETSLAGFDA VLLPGGFSYGDYLRTGAIAKFSSIMPEVLRFAEMGKPVLGVCNGFQILTEIGLLPGAL IRNNNLHFICKTVPLRVANASTMFTELYEEGEIIQVPVAHGEGNYYCDDETLLKLKEN NQIVFTYDSVNPNGSRADIAGIVNERGNVLGMMPHPERAVEEIIGGTDGLRLFESVVK AWKEEQVNA" misc_feature complement(1843333..1843989) /gene="purL" /locus_tag="lmo1770" /note="phosphoribosylformylglycinamidine synthase subunit PurQ; Region: PRK03619" /db_xref="CDD:235140" misc_feature complement(order(1843396..1843407,1843411..1843413, 1843564..1843569,1843720..1843722,1843732..1843734, 1843825..1843827,1843837..1843842)) /gene="purL" /locus_tag="lmo1770" /note="putative active site [active]" /db_xref="CDD:153211" misc_feature complement(order(1843399..1843401,1843405..1843407, 1843732..1843734)) /gene="purL" /locus_tag="lmo1770" /note="catalytic triad [active]" /db_xref="CDD:153211" regulatory complement(1843323..1843328) /regulatory_class="ribosome_binding_site" /gene="purL" /locus_tag="lmo1770" gene complement(1843993..1844238) /locus_tag="lmo1771" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985970" CDS complement(1843993..1844238) /locus_tag="lmo1771" /EC_number="6.3.5.3" /experiment="EXISTENCE:[PMID:19448609]" /note="With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine synthase subunit PurS" /protein_id="NP_465296.1" /db_xref="GeneID:985970" /translation="MYNVKVYVTLKKSVLDPQGVAVKDAAKSMGYEEVEDVRIGKFME LKVAKSDRDIHEVLNEMCDKLLTNPVMEDYRYEIEEA" misc_feature complement(1843999..1844235) /locus_tag="lmo1771" /note="phosphoribosylformylglycinamidine synthase subunit PurS; Reviewed; Region: PRK05974" /db_xref="CDD:235659" regulatory complement(1843998..1844003) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1771" regulatory complement(1844246..1844251) /regulatory_class="ribosome_binding_site" gene complement(1844250..1844963) /gene="purC" /locus_tag="lmo1772" /db_xref="GeneID:985969" CDS complement(1844250..1844963) /gene="purC" /locus_tag="lmo1772" /EC_number="6.3.2.6" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole-succinocarboxamide synthase" /protein_id="NP_465297.1" /db_xref="GeneID:985969" /translation="MTNELVYEGKAKRLFKTEEAGVLRVAYKDDATALNGVRKESFAG KGELNNQITSLIFSHLAEAGIESHFIRAISETEQLVKEVSIIPLEVVVRNVMAGSLAK RLGKEEGEQIPNAIVEFYYKDDALDDPFINDDHVLYLEVATTSEMDTIRQAARSINKV LQELFNQMNITLIDFKLEFGRDAAGEILLADEISPDTCRLWDKETNQKLDKDVFRRNI GNLTDVYTEVLNRLKQVQN" misc_feature complement(1844259..1844963) /gene="purC" /locus_tag="lmo1772" /note="phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed; Region: PRK09362" /db_xref="CDD:181800" misc_feature complement(order(1844391..1844396,1844430..1844432, 1844598..1844600,1844709..1844711,1844715..1844717, 1844721..1844723,1844760..1844762,1844889..1844891, 1844895..1844897,1844919..1844924,1844928..1844930, 1844934..1844939,1844943..1844948)) /gene="purC" /locus_tag="lmo1772" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:133470" misc_feature complement(order(1844367..1844378,1844391..1844393, 1844430..1844432,1844436..1844444,1844580..1844582, 1844598..1844600,1844604..1844606,1844667..1844675, 1844685..1844687,1844691..1844693,1844697..1844699, 1844709..1844711,1844715..1844726,1844757..1844759, 1844859..1844861,1844895..1844897,1844922..1844924, 1844928..1844939,1844943..1844945)) /gene="purC" /locus_tag="lmo1772" /note="active site" /db_xref="CDD:133470" misc_feature complement(order(1844367..1844378,1844436..1844444, 1844580..1844582,1844604..1844606,1844667..1844675, 1844685..1844687,1844691..1844693,1844697..1844699, 1844859..1844861)) /gene="purC" /locus_tag="lmo1772" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:133470" regulatory complement(1844973..1844978) /regulatory_class="ribosome_binding_site" gene complement(1845044..1846336) /gene="purB" /locus_tag="lmo1773" /db_xref="GeneID:985967" CDS complement(1845044..1846336) /gene="purB" /locus_tag="lmo1773" /EC_number="4.3.2.2" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide" /codon_start=1 /transl_table=11 /product="adenylosuccinate lyase" /protein_id="NP_465298.1" /db_xref="GeneID:985967" /translation="MLERYTRKEMGNIWTEQNRYQAWLEVEILACEAWAELGDIPKED VAKIRANAKFDVDRIHEIELETRHDVVAFTRSVSESLGAERKWVHYGLTSTDVVDTAN SYLLKQANEILRKDLENFIAIIGEKAKEHKYTVTMGRTHGVHAEPTTFGLKLALWYEE MKRNLERFNFAADGVEFGKISGAVGTYANIDPFVETYVCEKLGTTPAPISTQTLQRDR HAEYLATLALIATSVEKFAVEVRALQKSEVREVEEFFAKGQKGSSAMPHKRNPIGSEN VTGLARVIRGHMVTAYENVPLWHERDISHSSAERIILPDSTILLDYILNRFGNIVKNL TVFPENMKRNMDRTLGLIYSQRVLLALIDKGLAREAAYDVVQPRAMEAWEKQVPFREL VEQDATITENLSAEEIADCFDYNYHLKNVDLIFDRLGL" misc_feature complement(1845056..1846327) /gene="purB" /locus_tag="lmo1773" /note="Adenylsuccinate lyase (ASL)_subgroup 1; Region: Adenylsuccinate_lyase_1; cd01360" /db_xref="CDD:176464" misc_feature complement(order(1845065..1845067,1845077..1845079, 1845083..1845085,1845230..1845235,1845248..1845253, 1845260..1845262,1845272..1845274,1845392..1845394, 1845404..1845409,1845413..1845418,1845425..1845448, 1845452..1845460,1845467..1845472,1845479..1845484, 1845488..1845493,1845500..1845502,1845512..1845514, 1845527..1845532,1845602..1845607,1845611..1845616, 1845620..1845622,1845632..1845634,1845653..1845655, 1845674..1845676,1845686..1845688,1845707..1845712, 1845716..1845718,1845764..1845766,1845770..1845772, 1845779..1845790,1845818..1845820,1845836..1845841, 1845857..1845862,1845869..1845871,1845878..1845883, 1845899..1845901,1845905..1845922,1846064..1846069, 1846073..1846078,1846103..1846105,1846130..1846132, 1846289..1846294)) /gene="purB" /locus_tag="lmo1773" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:176464" misc_feature complement(order(1845512..1845514,1845527..1845529, 1845533..1845535,1845701..1845703,1845914..1845916, 1846070..1846072,1846133..1846135)) /gene="purB" /locus_tag="lmo1773" /note="active site" /db_xref="CDD:176464" regulatory complement(1846348..1846353) /regulatory_class="ribosome_binding_site" gene complement(1846355..1847479) /gene="purK" /locus_tag="lmo1774" /db_xref="GeneID:985968" CDS complement(1846355..1847479) /gene="purK" /locus_tag="lmo1774" /experiment="EXISTENCE:[PMID:19448609]" /note="With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole carboxylase ATPase subunit" /protein_id="NP_465299.1" /db_xref="GeneID:985968" /translation="MDKKFLLTNSTIGIIGGGQLGRMLALAAKAMGYRIIVLDPTADC PAAQVSDEQIIADYDDKVALRELSEKADVVTYEFENIDYDALKMTQNLVSVPQGSELL SITQDRILEKAYLESANINIAPYAVIVEQDEIENEIKSIGYPAVLKTAQGGYDGKGQV VIHDARDIETAARLLRYGSCVLEAWIPFEKEISVVVARNLDGQIETFPVAENVHVNNI LHTTMVPADVAADVYEEAEEIARKLAEVLQLCGVLAVEMFVTKSGAIYVNELAPRPHN SGHFTIEACSISQFTQHIRAIVGLPLVKPELLKPAVMINILGQHVDAVNKQMVNYPHW FVHYYGKKEAKINRKMGHVTVLADEPKAVIQDLEETQIWK" misc_feature complement(1846370..1847425) /gene="purK" /locus_tag="lmo1774" /note="Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]; Region: PurK; COG0026" /db_xref="CDD:439797" gene complement(1847472..1847960) /gene="purE" /locus_tag="lmo1775" /db_xref="GeneID:985964" CDS complement(1847472..1847960) /gene="purE" /locus_tag="lmo1775" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes a step in the de novo purine nucleotide biosynthetic pathway" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole carboxylase catalytic subunit" /protein_id="NP_465300.1" /db_xref="GeneID:985964" /translation="MPAVIGVIMGSTSDWDTMKKACDVLDELEIAYEKKVVSAHRTPD LMFQYAEQARERGLKIIIAGAGGAAHLPGMVAAKTTLPVIGVPIKSKALNGMDSLLSI VQMPGGVPVATVAIGESGAVNAGLLAAQILSITDDAITNRLQKRRATLEETVLESSDY LG" misc_feature complement(1847478..1847954) /gene="purE" /locus_tag="lmo1775" /note="Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; Region: PurE; COG0041" /db_xref="CDD:439811" regulatory complement(1847486..1847494) /regulatory_class="ribosome_binding_site" /gene="purE" /locus_tag="lmo1775" regulatory complement(1847971..1847976) /regulatory_class="ribosome_binding_site" regulatory complement(1848138..1848162) /regulatory_class="terminator" gene complement(1848166..1848690) /locus_tag="lmo1776" /db_xref="GeneID:985962" CDS complement(1848166..1848690) /locus_tag="lmo1776" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465301.1" /db_xref="GeneID:985962" /translation="MDNGIFIVVTIFIVNILYVTIYTVRLLLTMKGYRYLAALSSVFE MIIYVVALSLVLDNLNNIANVLAYAVGFGVGIIVGMKIEERIALGYITVNVITKEYNL DLPNQIRDLGYGVTSWLASGRDGERMMLEILTQRKNERKLYKHIIEIDNGAFIVSSEP KQIHGGFWVKQVRK" misc_feature complement(1848169..1848690) /locus_tag="lmo1776" /note="hypothetical protein; Provisional; Region: PRK04164" /db_xref="CDD:235234" regulatory complement(1848698..1848703) /regulatory_class="ribosome_binding_site" gene complement(1848821..1848930) /locus_tag="lmor10" /db_xref="GeneID:985959" rRNA complement(1848821..1848930) /locus_tag="lmor10" /product="5S ribosomal RNA" /db_xref="GeneID:985959" gene complement(1849012..1851942) /locus_tag="lmor11" /db_xref="GeneID:985963" rRNA complement(1849012..1851942) /locus_tag="lmor11" /product="23S ribosomal RNA" /db_xref="GeneID:985963" gene complement(1852187..1853732) /locus_tag="lmor12" /db_xref="GeneID:985956" rRNA complement(1852187..1853732) /locus_tag="lmor12" /product="16S ribosomal RNA" /db_xref="GeneID:985956" gene complement(1854077..1854682) /locus_tag="lmo1777" /db_xref="GeneID:985957" CDS complement(1854077..1854682) /locus_tag="lmo1777" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465302.1" /db_xref="GeneID:985957" /translation="MKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQVTE GGDKFAIELAALFHDYNDSKLTEDPLQATEIITTWLREKEIPEDVISKIIRIIQAVSF KNGKNPIQASTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREIANRDHPENTTLQH FYDKLLLIQTQLKTKTGRELAGEKQIIMQDFIHALEKELKI" misc_feature complement(1854083..1854664) /locus_tag="lmo1777" /note="HD superfamily phosphodieaserase, includes HD domain of RNase Y [Translation, ribosomal structure and biogenesis, General function prediction only]; Region: RnaY; COG1418" /db_xref="CDD:441028" regulatory complement(1854691..1854696) /regulatory_class="ribosome_binding_site" regulatory 1854736..1854741 /regulatory_class="ribosome_binding_site" gene 1854748..1855521 /locus_tag="lmo1778" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985960" CDS 1854748..1855521 /locus_tag="lmo1778" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465303.1" /db_xref="GeneID:985960" /translation="MFAFKNVYLKRDNKMILSDINWVVNDKENWAILGLNGSGKTTLL QLLNGYLWPSSGNLQVLGHIFGKTSLPELRKSIGWVSNALDHQLKEYELSEQIVLSGK FASIGIYEKVTTAEIDQAKKLLTDCGGITLIGKPYKILSQGERQIVLIARALMASPKL LILDEPCNGLDLFAKNRLLERIKKIAELPESPTMLFVTHHTEEILPCFDNIILLRDGE ITHHGKTEKLLTEEVLQDFYQKPVELIRIKDGSIAVYPK" misc_feature 1854748..1855488 /locus_tag="lmo1778" /note="ABC-type molybdenum transport system, ATPase component ModF/photorepair protein PhrA [Inorganic ion transport and metabolism]; Region: ModF; COG1119" /db_xref="CDD:440736" regulatory 1855557..1855562 /regulatory_class="ribosome_binding_site" gene 1855571..1855933 /locus_tag="lmo1779" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985954" CDS 1855571..1855933 /locus_tag="lmo1779" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1779" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465304.1" /db_xref="GeneID:985954" /translation="MYETMIAKAGVRELLGMDTSLIYGSFAYEMEDEWMDLTGLWISN ENALIFYLENEDVYLLKKFAYEMIDSLEQKVSIISMTKKLILHLNNKESYTLLVANGE AKLFAARVNERIEKVSLG" regulatory 1855918..1855943 /regulatory_class="terminator" regulatory complement(1855919..1855944) /regulatory_class="terminator" gene complement(1855952..1857184) /locus_tag="lmo1780" /db_xref="GeneID:985952" CDS complement(1855952..1857184) /locus_tag="lmo1780" /EC_number="3.4.11.4" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the release of the N-terminal amino acid from a tripeptide" /codon_start=1 /transl_table=11 /product="aminotripeptidase" /protein_id="NP_465305.1" /db_xref="GeneID:985952" /translation="MKEELLKRFTKYVKVDTQSNEESTVCPTTPGQMELANILVTELK EIGMQEVTVDEFGYVMATLPSNSTKEVPVIGFLAHLDTATDLTGKNVQPQVHENYDGK DIILNKDLNVVLSPKQFPELAGYKGKTLITTDGTTLLGADDKAGITEIMVAMNHLINH PEIKHGKIRIAFTPDEEIGRGPERFDVEAFGAKYAYTMDGGPLGELEYESFNAASAKI TFKGNSVHPGTAKNKMVNAVKMAMEFDARIPKDEAPEYTEGYEGFYHLISLNGDVEQA RSYYIIRDFDHLKFVERKTHIASIAKELEEKYGEGSVELKLNDQYYNMREKIEPVKEI VDIVSAAMRNLDIEPKISPIRGGTDGAQLSYKGLPTPNIFGGGENFHGKFEYVALESM VKATEVIIEVARLFEEKE" misc_feature complement(1855958..1857181) /locus_tag="lmo1780" /note="tripeptide aminopeptidase PepT; Region: PRK05469" /db_xref="CDD:235484" misc_feature complement(order(1856042..1856044,1856120..1856122, 1856366..1856392,1856396..1856398,1856411..1856425, 1856450..1856452,1856459..1856461,1856468..1856473, 1856477..1856479,1856483..1856485,1856489..1856497, 1856501..1856509,1856930..1856932)) /locus_tag="lmo1780" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:349887" regulatory complement(1857193..1857198) /regulatory_class="ribosome_binding_site" gene complement(1857242..1857772) /locus_tag="lmo1781" /db_xref="GeneID:985951" CDS complement(1857242..1857772) /locus_tag="lmo1781" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1781" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465306.1" /db_xref="GeneID:985951" /translation="MGNYVALLRAVNVAGKNKVNMKNLKGALEEEGFQNVVTYIQSGN LVLSSILQTETEVAAKITKVIKAICELTIDVFVFSEQNYKQIIANNPFPPETIGEEER WMAAFYNENIDIPRQKNDQAEVIAIGRVLYVHVFSNQIHTLKLPVFLGQYKMALTTTR NWRTTLQLKTLLDSQE" misc_feature complement(1857251..1857772) /locus_tag="lmo1781" /note="Uncharacterized conserved protein, DUF1697 family [Function unknown]; Region: COG3797" /db_xref="CDD:443010" regulatory complement(1857780..1857785) /regulatory_class="ribosome_binding_site" regulatory 1857842..1857847 /regulatory_class="ribosome_binding_site" gene 1857856..1858611 /locus_tag="lmo1782" /db_xref="GeneID:985950" CDS 1857856..1858611 /locus_tag="lmo1782" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="3'-exo-deoxyribonuclease" /protein_id="NP_465307.1" /db_xref="GeneID:985950" /translation="MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIE LDLPAYKDYWNYAVKKGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEEFFMV TVYTPNSQAELKRLDYRMTFEDAILEYVKNLDNTKPVVLCGDLNVAHEEIDLKNPKTN RKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYF VVSERLKDKLVDAKIHADVLGSDHCPVELELNL" misc_feature 1857856..1858602 /locus_tag="lmo1782" /note="Human Ape1-like subfamily of the ExoIII family apurinic/apyrimidinic (AP) endonucleases; Region: Ape1-like_AP-endo; cd09087" /db_xref="CDD:197321" misc_feature order(1857874..1857876,1857880..1857894,1857904..1857906, 1857958..1857960,1857964..1857966,1857979..1857981, 1858036..1858041,1858168..1858170,1858177..1858179, 1858285..1858287,1858291..1858293,1858321..1858323, 1858327..1858329,1858333..1858335,1858342..1858347, 1858450..1858452,1858456..1858464,1858480..1858482, 1858486..1858488,1858492..1858494,1858498..1858503, 1858579..1858581) /locus_tag="lmo1782" /note="active site" /db_xref="CDD:197321" misc_feature order(1857874..1857876,1857880..1857894,1857904..1857906, 1857958..1857960,1857964..1857966,1857979..1857981, 1858036..1858041,1858168..1858170,1858177..1858179, 1858285..1858287,1858291..1858293,1858321..1858323, 1858327..1858329,1858333..1858335,1858342..1858347, 1858450..1858452,1858456..1858464,1858480..1858482, 1858486..1858488,1858492..1858494,1858498..1858500, 1858579..1858581) /locus_tag="lmo1782" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:197321" misc_feature order(1857874..1857876,1857958..1857960,1858168..1858170, 1858177..1858179,1858285..1858287,1858291..1858293, 1858579..1858581) /locus_tag="lmo1782" /note="putative phosphate binding site [ion binding]; other site" /db_xref="CDD:197321" misc_feature order(1857874..1857876,1857958..1857960,1858168..1858170, 1858285..1858287,1858291..1858293,1858501..1858503, 1858576..1858581) /locus_tag="lmo1782" /note="putative catalytic site [active]" /db_xref="CDD:197321" misc_feature order(1857880..1857882,1857958..1857960,1858576..1858578) /locus_tag="lmo1782" /note="metal binding site A [ion binding]; metal-binding site" /db_xref="CDD:197321" misc_feature order(1858168..1858170,1858177..1858179,1858285..1858287, 1858291..1858293,1858345..1858347,1858450..1858452, 1858492..1858494,1858498..1858500,1858579..1858581) /locus_tag="lmo1782" /note="AP binding site [nucleotide binding]; other site" /db_xref="CDD:197321" misc_feature order(1858285..1858287,1858291..1858293,1858579..1858581) /locus_tag="lmo1782" /note="metal binding site B [ion binding]; metal-binding site" /db_xref="CDD:197321" regulatory 1858621..1858642 /regulatory_class="terminator" regulatory complement(1858621..1858642) /regulatory_class="terminator" gene complement(1858651..1859010) /gene="rplT" /locus_tag="lmo1783" /db_xref="GeneID:985949" CDS complement(1858651..1859010) /gene="rplT" /locus_tag="lmo1783" /experiment="EXISTENCE:[PMID:19448609]" /note="binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L20" /protein_id="NP_465308.1" /db_xref="GeneID:985949" /translation="MPRVKGGTVTRKRRKKIVKLAKGYYGSKHLLFKVANQAVMKSYQ YAYRDRRQKKRDFRRLWIARINAAARMQDLSYSKLMHGLKLAGIDINRKMLADLAVND IASFNTLADSAKKALAK" misc_feature complement(1858666..1859007) /gene="rplT" /locus_tag="lmo1783" /note="50S ribosomal protein L20; Provisional; Region: rplT; PRK05185" /db_xref="CDD:179959" misc_feature complement(order(1858729..1858737,1858759..1858761, 1858768..1858773,1858780..1858785,1858801..1858803, 1858813..1858815,1858822..1858830,1858834..1858878, 1858885..1858890,1858900..1858905,1858912..1858923, 1858927..1858950,1858963..1858974,1858978..1858995)) /gene="rplT" /locus_tag="lmo1783" /note="23S rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:197305" misc_feature complement(order(1858684..1858689,1858705..1858710, 1858726..1858728,1858735..1858746,1858861..1858863, 1858870..1858875,1858879..1858884,1858891..1858893, 1858903..1858905)) /gene="rplT" /locus_tag="lmo1783" /note="L21 binding site [polypeptide binding]; other site" /db_xref="CDD:197305" misc_feature complement(order(1858711..1858713,1858720..1858722, 1858729..1858731,1858801..1858803,1858807..1858812, 1858819..1858821,1858828..1858833,1858840..1858842)) /gene="rplT" /locus_tag="lmo1783" /note="L13 binding site [polypeptide binding]; other site" /db_xref="CDD:197305" regulatory complement(1859019..1859024) /regulatory_class="ribosome_binding_site" gene complement(1859050..1859250) /gene="rpmI" /locus_tag="lmo1784" /db_xref="GeneID:985946" CDS complement(1859050..1859250) /gene="rpmI" /locus_tag="lmo1784" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L35" /protein_id="NP_465309.1" /db_xref="GeneID:985946" /translation="MPKMKTHRGSAKRFKRTGSGKLKRRHGFTSHMFANKSQKQKRKL RKSAMVSAGDFKRIRQMVAKMK" misc_feature complement(1859068..1859250) /gene="rpmI" /locus_tag="lmo1784" /note="Ribosomal protein L35 [Translation, ribosomal structure and biogenesis]; Region: RpmI; COG0291" /db_xref="CDD:440060" regulatory complement(1859259..1859264) /regulatory_class="ribosome_binding_site" gene complement(1859272..1859787) /gene="infC" /locus_tag="lmo1785" /db_xref="GeneID:985947" CDS complement(1859272..1859787) /gene="infC" /locus_tag="lmo1785" /experiment="EXISTENCE:[PMID:19448609]" /note="IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-3" /protein_id="NP_465310.1" /db_xref="GeneID:985947" /translation="MSKDMLVNDGIRAREVRLIDQDGEQLGVKSKIDALQIAEKANLD LVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTIDEHDFDTK LRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRS MFLVLAPLHEK" misc_feature complement(1859275..1859787) /gene="infC" /locus_tag="lmo1785" /note="Translation initiation factor IF-3 [Translation, ribosomal structure and biogenesis]; Region: InfC; COG0290" /db_xref="CDD:440059" gene 1859870..1860008 /locus_tag="lmos67" /db_xref="GeneID:18245152" misc_RNA 1859870..1860008 /locus_tag="lmos67" /product="LhrB" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245152" regulatory complement(1860152..1860173) /regulatory_class="terminator" gene complement(1860200..1861090) /gene="inlC" /locus_tag="lmo1786" /db_xref="GeneID:985945" CDS complement(1860200..1861090) /gene="inlC" /locus_tag="lmo1786" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin C" /protein_id="NP_465311.1" /db_xref="GeneID:985945" /translation="MKKNNWLQNAVIAMLVLIVGLCINMGSGTKVQAESIQRPTPINQ VFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELH LSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNELRDTDSLIHL KNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCV NEPVKYQPELYITNTVKDPDGRWISPYYISNGGSYVDGCVLWELPVYTDEVSYKFSEY INVGETEAIFDGTVTQPIKN" misc_feature complement(1860923..1861072) /gene="inlC" /locus_tag="lmo1786" /note="Bacterial adhesion/invasion protein N terminal; Region: Internalin_N; pfam12354" /db_xref="CDD:289150" misc_feature complement(<1860449..>1860877) /gene="inlC" /locus_tag="lmo1786" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature complement(1860734..1860799) /gene="inlC" /locus_tag="lmo1786" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(1860671..1860733) /gene="inlC" /locus_tag="lmo1786" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(1860605..1860670) /gene="inlC" /locus_tag="lmo1786" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(1860539..1860604) /gene="inlC" /locus_tag="lmo1786" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(1860206..1860376) /gene="inlC" /locus_tag="lmo1786" /note="LRR adjacent; Region: LRR_adjacent; pfam08191" /db_xref="CDD:369739" regulatory complement(1861099..1861104) /regulatory_class="ribosome_binding_site" gene 1861377..1861630 /locus_tag="lmos68" /db_xref="GeneID:18245153" misc_RNA 1861377..1861630 /locus_tag="lmos68" /product="rli43" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245153" regulatory complement(1861872..1861889) /regulatory_class="terminator" gene complement(1861907..1862251) /gene="rplS" /locus_tag="lmo1787" /db_xref="GeneID:985943" CDS complement(1861907..1862251) /gene="rplS" /locus_tag="lmo1787" /experiment="EXISTENCE:[PMID:19448609]" /note="this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L19" /protein_id="NP_465312.1" /db_xref="GeneID:985943" /translation="MNKLIDEITKSQLNPDVPNFRPGDTVRVHAKVVEGTRERIQLFE GVVIKRRGAGISETFTVRKISNSVGVERTFPVHTPRIAKLEVIRRGKVRRAKLYYLRN LRGKAARIKEIR" misc_feature complement(1861910..1862248) /gene="rplS" /locus_tag="lmo1787" /note="Ribosomal protein L19 [Translation, ribosomal structure and biogenesis]; Region: RplS; COG0335" /db_xref="CDD:440104" gene 1862270..1862308 /locus_tag="lmos69" /db_xref="GeneID:18245154" misc_RNA 1862270..1862308 /locus_tag="lmos69" /product="L19" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245154" regulatory 1862445..1862450 /regulatory_class="ribosome_binding_site" gene 1862459..1862893 /locus_tag="lmo1788" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985948" CDS 1862459..1862893 /locus_tag="lmo1788" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_465313.1" /db_xref="GeneID:985948" /translation="MEQWTVKEMAAYVGISADTLRYYEKNKIIVPNRLENGYRVYNTE HLLELKFILVMKYARFSLSEIKLMMEWLRSEPSVACNTASKELLALKAAEIKQTIAHY TKIAALLEELPQIDEVQDYSTVQKDVNTFVEHIFTDIRKDGF" misc_feature 1862468..1862776 /locus_tag="lmo1788" /note="Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators; Region: HTH_MerR-like; cd00592" /db_xref="CDD:133378" misc_feature order(1862471..1862479,1862519..1862521,1862567..1862575) /locus_tag="lmo1788" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133378" misc_feature order(1862609..1862611,1862618..1862620,1862630..1862635, 1862660..1862662,1862720..1862722,1862732..1862734, 1862750..1862752,1862762..1862764,1862771..1862776) /locus_tag="lmo1788" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133378" regulatory 1862880..1862885 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1788" gene 1862893..1863480 /locus_tag="lmo1789" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985940" CDS 1862893..1863480 /locus_tag="lmo1789" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465314.1" /db_xref="GeneID:985940" /translation="MAKVVAIIGDPREKGTSRDLFQKYLSFFQEHPTIEVKIYDIREL AFDPNLPEGYRTEQTPEIIALKNDVHSADLLLFSYPVWWFNVPAVLKGVIDHLFWRGE SYSFKDKKYFLTGPWRKKRARLIYTIGGMEIQHRLFGRPALTALRYPLWMSGVFSVKV TSIDRLDLSIRRTDNYYNKKVTHAAKKDIQFLLKK" misc_feature 1862899..1863393 /locus_tag="lmo1789" /note="Flavodoxin-like fold; Region: Flavodoxin_2; pfam02525" /db_xref="CDD:426816" regulatory 1863488..1863493 /regulatory_class="ribosome_binding_site" gene 1863501..1864217 /locus_tag="lmo1790" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985953" CDS 1863501..1864217 /locus_tag="lmo1790" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465315.1" /db_xref="GeneID:985953" /translation="MKITTKHSYWQITTFPHLFPVNCYLVLERDGLTLIDTGILAHAK GIISLIHKLKSPLKRILLTHAHGDHIGGLIAVKAAFPEALVMIGSREKLLVETKEIYA FEAQKPLKGSYSDRLPVRIDQILKDGDMVGSLLIIDTPGHTPGSISFFDERNGHLFVG DLFQTRGGAAICGEKRWLFPFPAMGSWDLPTSIASAENLQLFDVTEIACGHGPVKAMA DFDLTNVLKRAKEQVTNEKD" misc_feature 1863531..1864136 /locus_tag="lmo1790" /note="uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain; Region: yflN-like_MBL-fold; cd07721" /db_xref="CDD:293807" misc_feature order(1863690..1863692,1863696..1863698,1863702..1863707, 1863924..1863929,1863981..1863983,1864131..1864133) /locus_tag="lmo1790" /note="putative active site [active]" /db_xref="CDD:293807" regulatory 1864212..1864242 /regulatory_class="terminator" regulatory complement(1864212..1864242) /regulatory_class="terminator" gene complement(1864248..1864637) /locus_tag="lmo1791" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985939" CDS complement(1864248..1864637) /locus_tag="lmo1791" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1791" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465316.1" /db_xref="GeneID:985939" /translation="MAIFGTPDEKETKKSERQKEREAYVQEENDQKRIGQRWQDIQVS TGPINVNHDILTVVFAKSVRPRIKSDPEAYLETVGFENLLQELQKKALDAGGNGLIHC SFTEQFVDGLVYQLAYGTAVNIKITRF" gene complement(1864657..1865394) /gene="trmD" /locus_tag="lmo1792" /db_xref="GeneID:985936" CDS complement(1864657..1865394) /gene="trmD" /locus_tag="lmo1792" /experiment="EXISTENCE:[PMID:19448609]" /note="methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA" /codon_start=1 /transl_table=11 /product="tRNA (guanine-N(1)-)-methyltransferase" /protein_id="NP_465317.1" /db_xref="GeneID:985936" /translation="MKIDILSIFPDMFSGVTGNSIIKKAIENERVAVEVTDFREYAEG KHHIVDDYPYGGGAGMLLKAQPIFDAVQAVKEKQPETKPRVILMDPAGKRFNQKMAEE FAEEEHLVFICGHYEGYDERIREHLVTDEVSIGDYILTGGEIGAMIVMDSVIRLLPGV LGNKDSAVTDSFSTGLLEHPHYTRPADFRGMKVPDILLSGNHAWIEEWRDKESLKRTY ERRPDLLKNYPLTDKQKTWLKEWSDSK" misc_feature complement(1864672..1865394) /gene="trmD" /locus_tag="lmo1792" /note="tRNA G37 N-methylase TrmD [Translation, ribosomal structure and biogenesis]; Region: TrmD; COG0336" /db_xref="CDD:440105" gene complement(1865394..1865912) /gene="rimM" /locus_tag="lmo1793" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985937" CDS complement(1865394..1865912) /gene="rimM" /locus_tag="lmo1793" /experiment="EXISTENCE:[PMID:19448609]" /note="Essential for efficient processing of 16S rRNA" /codon_start=1 /transl_table=11 /product="16S rRNA-processing protein RimM" /protein_id="NP_465318.1" /db_xref="GeneID:985937" /translation="MEKMYNVGKIVNTHGLIGEIRVIATTDFPEERFQVGNTVYLFEK NSKKPEKLIIRSHRKHKNFDLLMFEGFTGIHQVERMKEGVLKIKETQLTNLEENEFYF HEIIGCTVVTTDGEELGEITEILTPGANDVWVVKGADKKEKLIPYIADVVKEINIDDQ KITIEVMEGLLD" misc_feature complement(1865397..1865912) /gene="rimM" /locus_tag="lmo1793" /note="16S rRNA-processing protein RimM; Provisional; Region: rimM; PRK00122" /db_xref="CDD:234650" regulatory complement(1865407..1865412) /regulatory_class="ribosome_binding_site" /gene="rimM" /locus_tag="lmo1793" regulatory complement(1865919..1865924) /regulatory_class="ribosome_binding_site" gene complement(1865922..1866308) /locus_tag="lmo1794" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985935" CDS complement(1865922..1866308) /locus_tag="lmo1794" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465319.1" /db_xref="GeneID:985935" /translation="MEIIQKVVVKQILTEASKQELIEYYTEQKRQIEQECDQLHFEQK KMERKSKFQPERVADYFTHELDIRREKKKLIQFQMEQLEVLELGSEIREREMETIIDV QVGDKWDKSIFDKTIVVKDGIIVEIR" misc_feature complement(1865925..1866308) /locus_tag="lmo1794" /note="YlqD protein; Region: YlqD; pfam11068" /db_xref="CDD:431635" regulatory complement(1866315..1866320) /regulatory_class="ribosome_binding_site" gene complement(1866336..1867070) /locus_tag="lmo1795" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985941" CDS complement(1866336..1867070) /locus_tag="lmo1795" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465320.1" /db_xref="GeneID:985941" /translation="MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIA LPIDDPSVAVQAISLVDGLLLTGGQDITPQFYLEEPSQEIGAYFPPRDSYEIALVRAA LDAGKPIFAICRGMQLVNVALGGSLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTS ELAKHHPNKKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPE LMFQTDPESEQLFQALVDESKKTMVK" misc_feature complement(1866417..1867064) /locus_tag="lmo1795" /note="Peptidase C26; Region: Peptidase_C26; pfam07722" /db_xref="CDD:429620" regulatory complement(1867078..1867083) /regulatory_class="ribosome_binding_site" regulatory complement(1867157..1867173) /regulatory_class="terminator" gene complement(1867180..1867410) /locus_tag="lmo1796" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985933" CDS complement(1867180..1867410) /locus_tag="lmo1796" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465321.1" /db_xref="GeneID:985933" /translation="MEELILSIVKPLVDHPEDVVITPEETDTSLTYKLSVSKEDMGRV IGKQGRIAKAIRTLVYAVGSKNDKKIRLEIIE" misc_feature complement(1867183..1867410) /locus_tag="lmo1796" /note="Predicted RNA-binding protein YlqC, contains KH domain, UPF0109 family [General function prediction only]; Region: YlqC; COG1837" /db_xref="CDD:441442" regulatory complement(1867422..1867427) /regulatory_class="ribosome_binding_site" gene complement(1867427..1867699) /gene="rpsP" /locus_tag="lmo1797" /db_xref="GeneID:985931" CDS complement(1867427..1867699) /gene="rpsP" /locus_tag="lmo1797" /experiment="EXISTENCE:[PMID:19448609]" /note="binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S16" /protein_id="NP_465322.1" /db_xref="GeneID:985931" /translation="MAVKIRLKRIGSKKKPFYRIVVADSRFPRDGRSIETIGTYNPLL DPVEVKIDEEATLKWMHNGAKPSDTVRNLLSREGIMEKFHNQKLGK" misc_feature complement(1867469..1867696) /gene="rpsP" /locus_tag="lmo1797" /note="Ribosomal protein S16 [Translation, ribosomal structure and biogenesis]; Region: RpsP; COG0228" /db_xref="CDD:439998" regulatory complement(1867709..1867714) /regulatory_class="ribosome_binding_site" gene complement(1867802..1869460) /locus_tag="lmo1798" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985932" CDS complement(1867802..1869460) /locus_tag="lmo1798" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465323.1" /db_xref="GeneID:985932" /translation="MPWRGILDELENKIIDQLTEAEEHATYNGKWHGFLTIGYKNKRA TVINFSYLCLANLINEMKKSAIKNQTEEAISFKIDVAVDYQLENLGEWNKKALKTKKN YYRRGIALNENFKIALMEQEINANAILLPGDEGLAINVENMNRYLIQTNKNQAQLNLT VDSTIVTFNTVGWFFDGKKIYDLETSELEHGRRNTKQVTPDAVFELVGNAGNYLASQV NQTGEFNYGWFACFDKKIKHYNSLRHASTTYSMLEAYELTGDKTILEAATSALTYLEQ NFIYEKDDLAFLIEPELREVKLGGSAATLLALTKYMKITGTKTYLPLSRKIANTILSL QEEDGKFTHVLEYPSLEVKDIFRIIYYDGEAVFGLLRLYEIDRDSKWLEAAAKSFDHF IRDDYWQNHDHWLSYCANEITKYIPDEAYYEFGLKNAFDNLLFIYERETTFPTFLELT VATKEMSLRMKAEGLEGLLRDYPLDELEKTITKRALYQLNGYFYPELAIYYKNPARID GSFFIRHQSFRVRIDDVEHNISGYVRYYHLLKQGKLSNEAETVK" misc_feature complement(<1868249..>1868728) /locus_tag="lmo1798" /note="Lantibiotic modifying enzyme [Defense mechanisms]; Region: LcnDR2; COG4403" /db_xref="CDD:443528" regulatory complement(1869468..1869473) /regulatory_class="ribosome_binding_site" gene complement(1869532..1872243) /locus_tag="lmo1799" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985930" CDS complement(1869532..1872243) /locus_tag="lmo1799" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan binding protein" /protein_id="NP_465324.1" /db_xref="GeneID:985930" /translation="MKKQRVDYKRRLDQKRAQKAKLIAALITTTTMMVAPVTVNYDSF NHQFALSGIQADAATIDLLGNSNLNTQYSNGKLVITLSGNQLVSASAVSTYYPYFELP SELSSILSNPNIRANMKIDYKIAYLGIGGIGLFNQGTVNGSSSSNFFIDSSRNAIGAK VNHLLGVGVGSVSTFTLTIDLLALGVTALPSANDGKLDFAARTGDGLLDVDLLNSNAA RGFITTDVGDADADADADADADADADADADADADADADADADADADADADADADADAD ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD ADADADADADADADADADADADADADADADADADADADADADADADADADADADADVD IDWRDFLVEKPTVNPIYEGTKTISGSSIYKNMNINALLKSLQSDAPVGTTFYINLTLP DGTVIGNVLIHADGTYTINIPNYNLKAGDVIHLQVTAKYGDEVKTSDDVSVTVLPLVD SDADADADADADADADADADADGGPNPSTNGGTTGTSNGGTGVTVTNMSSNGSGTMLS SGYSADGTTSISASDLPSTGDTNSSLPWVGLGLFSLAGAFLLRLFRK" regulatory complement(1872251..1872256) /regulatory_class="ribosome_binding_site" regulatory complement(1872699..1872716) /regulatory_class="terminator" gene complement(1872724..1873620) /locus_tag="lmo1800" /db_xref="GeneID:985934" CDS complement(1872724..1873620) /locus_tag="lmo1800" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="protein-tyrosine phosphatase" /protein_id="NP_465325.1" /db_xref="GeneID:985934" /translation="MKNWVKVTGAGVLSATLLLGGCGAQSEEKAEANVKTEQTLKPGS QIKLEGAVNVRDLGGYKTTDGLTIKPHKLIRSAELANLSDSDKKKLVNTYDLSHIVDF RTSSEVATKPDPKLTDVDYTHDSVMKDNGTSTSTQDLTASLAKMDNPETFLINANKSF ITDETSIQAYKDFFDILLANQDGSVLWHCTAGKDRAGFGTALVLSALGVDKNTVIDDY MLSNKYRADENKKAIEAVAAKTDNKKVIDGMTAVMEVRESYINAAFDEINAKYGSMDN FLKEKLGLTDAKKEQLKKAYLY" misc_feature complement(1872727..1873479) /locus_tag="lmo1800" /note="Protein tyrosine/serine phosphatase Oca4 [Signal transduction mechanisms]; Region: Oca4; COG2365" /db_xref="CDD:441932" regulatory complement(1873731..1873755) /regulatory_class="terminator" gene complement(1873764..1875116) /gene="ffh" /locus_tag="lmo1801" /db_xref="GeneID:985929" CDS complement(1873764..1875116) /gene="ffh" /locus_tag="lmo1801" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="signal recognition particle protein Ffh" /protein_id="NP_465326.1" /db_xref="GeneID:985929" /translation="MAFEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADV NFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPT VIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPV FSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEI LLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIAT GEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTLDDF LEQLQQVKQMGPLDELLKMMPGANKMKGLDNMNVDDKQLGHIEAIIKSMTKNEKDNPD IINASRRKRIARGSGRPVQEINRLLKQFAEMKKMMKQMTGGGKGKKGKNPFGNFKMPF " misc_feature complement(1873842..1875113) /gene="ffh" /locus_tag="lmo1801" /note="Signal recognition particle GTPase [Intracellular trafficking, secretion, and vesicular transport]; Region: Ffh; COG0541" /db_xref="CDD:440307" regulatory complement(1875125..1875130) /regulatory_class="ribosome_binding_site" gene complement(1875129..1875461) /locus_tag="lmo1802" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985927" CDS complement(1875129..1875461) /locus_tag="lmo1802" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA-binding protein" /protein_id="NP_465327.1" /db_xref="GeneID:985927" /translation="MFEKTNRMNLLFDFYQELLTTKQKAYVSFYYLDDYSLGEIAEEF EVSRQAIYDNIKRTEESLEKYEEKLGMLKKYQQREKLFTQLEAQLTKKNFLDEQVKDT LEQLKNID" misc_feature complement(1875144..1875455) /locus_tag="lmo1802" /note="putative DNA-binding protein; Validated; Region: PRK00118" /db_xref="CDD:234647" regulatory complement(1875471..1875476) /regulatory_class="ribosome_binding_site" regulatory complement(1875540..1875564) /regulatory_class="terminator" gene complement(1875574..1876560) /locus_tag="lmo1803" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985925" CDS complement(1875574..1876560) /locus_tag="lmo1803" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division protein FtsY" /protein_id="NP_465328.1" /db_xref="GeneID:985925" /translation="MTFFKKLKDKITQQTDSVSGKFKDGLSKTRGNFSGKINEMVARY RKVDEDFFEELEEILIGADVGFETVMELVDTLRREVQLRNISDPKDVQEVIVEKLVEI YQGDEKEDEALHIEEDGLTVILFVGVNGVGKTTSIGKMAHRFKQEGKKVMLAAGDTFR AGAIDQLEVWGERTGVDVIKQAEGSDPAAVMFDAVQAAKARKADILLCDTAGRLQNKV NLMNELEKVKRVITREIPNAPHEVLLVLDATTGQNAFVQAKQFKETTDVTGIILTKLD GTAKGGIVIAIRNELDIPVKFVGLGEQMDDLQAFDANEYVYGLFADMVDNEK" misc_feature complement(1875589..1876554) /locus_tag="lmo1803" /note="signal recognition particle-docking protein FtsY; Provisional; Region: PRK10416" /db_xref="CDD:236686" misc_feature complement(order(1875655..1875666,1875733..1875735, 1875739..1875744,1875919..1875921,1875925..1875927, 1875934..1875936,1876063..1876065,1876081..1876083, 1876090..1876092,1876144..1876146,1876156..1876179)) /locus_tag="lmo1803" /note="active site" /db_xref="CDD:349783" misc_feature complement(order(1875655..1875657,1875724..1875735, 1875739..1875741,1875793..1875795,1875802..1875816, 1875883..1875885,1875901..1875906,1875910..1875921, 1875925..1875927,1875958..1875963,1875970..1875975, 1875982..1875984,1876015..1876026,1876051..1876056, 1876063..1876068,1876075..1876086,1876171..1876179)) /locus_tag="lmo1803" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:349783" misc_feature complement(order(1875655..1875657,1875724..1875735, 1875739..1875741,1875790..1875795,1875805..1875816, 1875820..1875822,1875913..1875921,1876054..1876056, 1876063..1876068,1876075..1876083,1876171..1876176)) /locus_tag="lmo1803" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:349783" misc_feature complement(order(1875655..1875657,1875724..1875735, 1875739..1875741,1875805..1875816,1875913..1875921, 1876063..1876068,1876075..1876083,1876171..1876176)) /locus_tag="lmo1803" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:349783" regulatory complement(1876568..1876573) /regulatory_class="ribosome_binding_site" gene complement(1876575..1880135) /gene="smc" /locus_tag="lmo1804" /db_xref="GeneID:985926" CDS complement(1876575..1880135) /gene="smc" /locus_tag="lmo1804" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="chromosome condensation protein Smc" /protein_id="NP_465329.1" /db_xref="GeneID:985926" /translation="MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAI RWVLGEQSAKSLRGGRMGDVIFAGSDTRKPINFAEVSLILENEDHFLPLDYSEVAVTR RIYRNGDSEFLINKENCRLKDIVDLFMDSGLGRESFSIISQGKIDEILNSKPEERRSI FEEAAGVLKYKHRKKQAENKLFETEENLNRVQDILYELEGQLEPLEMQASIAKDYLFQ QEELEKYEVTLLASEISSLTEKLAEVRKEFGENQTVLIKLREELHAEEAVISREKQAL NETDIALDKLQERLLVETEKLEQLEGERNLQLERKKHSSENEQVYAETLAVITEKITA LEEQKEVLSSSKLEKETALEIAIKSKKVLEATLAKYDDLSEEAIENRKSDYIDLRHTQ TTINNDLGYIERQIGQITSRIDKLDLENSHHVDDRKDMLAQIETTKTHLTKIQSELTE QMEIYREVQQTLAKQEAVFGTQERALYKHYETVQQMKSRKETLEELADDYAGFFQGVR EVLKAKKEIPGILGALVELVEIPAKYQQAMETALGASAQNVVVEDDRVAREAISFLKK TKSGRATFLPLSTIQPRELPAATKNALSNQPAFIALASEVISFDEKVSPVILNALGTT ILAKDLKGANTLARLVNFRYRIVTLEGDVVNAGGSMTGGATKGGKSSILTRKHELGQL AEKIAELNESTREMESAVQLAKDSMAKKREELEETRVIGENLRLQEKELLGKLDRETE NLERFNKQLQLYDIEKADGSEELNKLLERKETLLQEQVEIAKQIEVTDEEIKAMTSSS KALESKRAADLESLSSLKAQIAAKREQLQSATEAVERVTTTLHENYEQKEAAEQKLAS LKTNLTSVHTSEETARKSIEELRKDKTETSEKLTQTRQTRAELQEKLELLEAELTQKN NQISFYMEQKNNAEISIGRLEVDIANRIDRLQEAYLLTPEQAEEKILSEVNTEQARSK VRLLKRSIDELGIVNIGAIEEFERIQERFDFLTGQQADLLAAKETLFKVMDEMDEEMK IRFSESFEAIKTEFAIVFPELFGGGSAELVLLDPENLLTTGIDIVVQPPGKKLQNLSL RSGGERALTAIALLFAIIRVRPVPFCILDEVEAALDEANVTRFSRYLKQFESGTQFIV ITHRKGTMEEADVLYGVTMQESGVSKLVSVRLEETAELIK" misc_feature complement(1876602..1880129) /gene="smc" /locus_tag="lmo1804" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" regulatory complement(1880145..1880150) /regulatory_class="ribosome_binding_site" gene complement(1880158..1880847) /gene="rnc" /locus_tag="lmo1805" /db_xref="GeneID:985924" CDS complement(1880158..1880847) /gene="rnc" /locus_tag="lmo1805" /experiment="EXISTENCE:[PMID:19448609]" /note="cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity" /codon_start=1 /transl_table=11 /product="ribonuclease III" /protein_id="NP_465330.1" /db_xref="GeneID:985924" /translation="MNQWEELQESVGFDFKNVELLKQAFTHSSYVNEHRRENVKDNER LEFLGDAVLELTVSDYLFNKYPDMAEGHMTKMRAAIVCEPSLVEFAEAVHFSKYVRLG KGEEKAGGRTRPALLADVFESFIGALYLDNGIDKVVTFLERVIFPKIDAGAYLQTVDY KTQLQEIVQRDRDVLIEYDILGETGPAHNKAFDAQVIVNGQVLGKGSGRTKKQAEQSA AQFAINKLIHR" misc_feature complement(1880170..1880844) /gene="rnc" /locus_tag="lmo1805" /note="dsRNA-specific ribonuclease [Transcription]; Region: Rnc; COG0571" /db_xref="CDD:440336" regulatory complement(1880855..1880860) /regulatory_class="ribosome_binding_site" regulatory complement(1880874..1880923) /regulatory_class="terminator" gene complement(1881041..1881274) /gene="acpP" /locus_tag="lmo1806" /db_xref="GeneID:986035" CDS complement(1881041..1881274) /gene="acpP" /locus_tag="lmo1806" /experiment="EXISTENCE:[PMID:19448609]" /note="carries the fatty acid chain in fatty acid biosynthesis" /codon_start=1 /transl_table=11 /product="acyl carrier protein" /protein_id="NP_465331.1" /db_xref="GeneID:986035" /translation="MAEVLEKVTKIIVDRLGVEESKVTLEASFKEDLGADSLDVVELV MELEDEFGVEISDGDAENINTVGDAVKYIEANA" misc_feature complement(1881047..1881274) /gene="acpP" /locus_tag="lmo1806" /note="acyl carrier protein; Provisional; Region: acpP; PRK00982" /db_xref="CDD:179197" regulatory complement(1881286..1881291) /regulatory_class="ribosome_binding_site" gene complement(1881381..1882124) /gene="fabG" /locus_tag="lmo1807" /db_xref="GeneID:985923" CDS complement(1881381..1882124) /gene="fabG" /locus_tag="lmo1807" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="3-ketoacyl-ACP reductase" /protein_id="NP_465332.1" /db_xref="GeneID:985923" /translation="MTLQGKVAVVTGGSRGIGRDIAINLAKEGANIFFNYNGSPEAAE ETAKLVAEHGVEVEAMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRM KEDEWDDVININLKGTFLCTKAVSRTMMKQRAGKIINMASVVGLIGNAGQANYVASKA GVIGLTKTTARELAPRGINVNAVAPGFITTDMTDKLDEKTKEAMLAQIPLGAYGTTED IANAVLFLASDASKYITGQTLSVDGGMVM" misc_feature complement(1881384..1882124) /gene="fabG" /locus_tag="lmo1807" /note="3-ketoacyl-(acyl-carrier-protein) reductase; Validated; Region: fabG; PRK05557" /db_xref="CDD:235500" gene complement(1882128..1883069) /gene="fabD" /locus_tag="lmo1808" /db_xref="GeneID:985921" CDS complement(1882128..1883069) /gene="fabD" /locus_tag="lmo1808" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ACP S-malonyltransferase" /protein_id="NP_465333.1" /db_xref="GeneID:985921" /translation="MTKIAFVFPGQGAQKVGMGQDVAAEYPEAKKIYDDADERLGFSI TEIITEGPIELLTKSENAQPALVSTSVAILRALETYGVKADYVAGHSLGEYSALVAGG FLEASDAIYLVRKRGELMEAAVPNGAGAMAAVLGVDRETLKTITEEVTKEGDAVQLAN LNCPGQIVISGTTAGVEKAGEKAKESGAKRVLPLAVSGPFHSSLMEPAALAFRDVLAE VKISDGQIPVVNNVDAKETTDKSEISDKLIKQIYSPVLWEDIVEELIKNGVDTFVEIG SGKVLAGLIKKINRDVTVLSAGDAESVKSVAATLKGE" misc_feature complement(1882146..1883066) /gene="fabD" /locus_tag="lmo1808" /note="Malonyl CoA-acyl carrier protein transacylase [Lipid transport and metabolism]; Region: FabD; COG0331" /db_xref="CDD:440100" regulatory complement(1882132..1882137) /regulatory_class="ribosome_binding_site" /gene="fabD" /locus_tag="lmo1808" gene complement(1883062..1884075) /gene="plsX" /locus_tag="lmo1809" /db_xref="GeneID:985913" CDS complement(1883062..1884075) /gene="plsX" /locus_tag="lmo1809" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate acyltransferase PlsX" /protein_id="NP_465334.1" /db_xref="GeneID:985913" /translation="MKIAVDAMGGDHAPKEIVLGVMKAVAQYKDVEILLFGDETKINE YLTDKTRVKIIHTDEKIESDDEPVRAVKRKKKASMVLAAQAVKDGEADACISAGNTGA LMSTGLFVIGRIKGIDRPALAPTLPTVTGKGFVMLDLGANAEAKPEHLLQFGLMGSVY AEKVRKIDRPRVALLNIGTEETKGNDLTKKSFELMKNQDAYEFIGNIEARDLLMDVAD VVVTDGFTGNMVLKSIEGTGAAFLSMLKMSLLNGFKNKVAASFLKKDLMALKAKMDYS EYGGACLFGVQAPVVKAHGSSNANGIFTTIRQVREMVEKQVVETIKAEVDKVKVGGTE SND" misc_feature complement(1883092..1884075) /gene="plsX" /locus_tag="lmo1809" /note="Acyl-ACP:phosphate acyltransferase (fatty acid/phospholipid biosynthesis) [Lipid transport and metabolism]; Region: PlsX; COG0416" /db_xref="CDD:440185" regulatory complement(1883081..1883086) /regulatory_class="ribosome_binding_site" /gene="plsX" /locus_tag="lmo1809" regulatory complement(1884084..1884089) /regulatory_class="ribosome_binding_site" gene complement(1884096..1884665) /locus_tag="lmo1810" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985918" CDS complement(1884096..1884665) /locus_tag="lmo1810" /experiment="EXISTENCE:[PMID:19448609]" /note="negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria" /codon_start=1 /transl_table=11 /product="fatty acid biosynthesis transcriptional regulator" /protein_id="NP_465335.1" /db_xref="GeneID:985918" /translation="MKKYSKKDRQMKLQVAIEENPFITDEQLAEKFGVSVQTIRLDRV ALSIPELRERIKHVASVNYADAVKSLPIDEVIGEIIDIQLSKSAISIFDVRSEHVFKR NKIARGHHLFAQANSLATAVIPNEIALTTQATVRFVRSVNEGERIIAKAKVRPATDNR AITIVDVKSYVGDEIVLKGKFEMYHATQK" misc_feature complement(1884099..1884662) /locus_tag="lmo1810" /note="transcription factor FapR; Region: PRK04424" /db_xref="CDD:179847" regulatory complement(1884674..1884679) /regulatory_class="ribosome_binding_site" gene complement(1884846..1886894) /locus_tag="lmo1811" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985917" CDS complement(1884846..1886894) /locus_tag="lmo1811" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes branch migration in Holliday junction intermediates" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase RecG" /protein_id="NP_465336.1" /db_xref="GeneID:985917" /translation="MSELKRIPTTEIKGIGEETAKTLKELGLSTVHDLLWNFPYRYED YRLRDLSEVAHEERITIQGEVLTEATVAFYGRKKSKLSFRVSTEGQVIKIDFFNQPYL KSKISVGETVTISGKWDKSRAQVTASKIKIGAVESEEELEGVYRLKGTLRNKTMQKYT RLAFDSYSQDIEEVIPGNLLEKYQLMDRLEAVRILHFPKNNEELKQARRRMVYEEFLL FQLKMQFFRKIEREKSGGISINYDVEDLRHYIDSLPFPLTKAQKRVVNEICGDMLSHF HMNRLLQGDVGSGKTVVASIAMYAAAKSGFQSALMVPTEILAEQHANSLVELLQPFDI TVGLLTSSVKGKQRRELLAMLENGSIDVLIGTHALIQDEVIYHRLGLVITDEQHRFGV AQRRVLREKGEYPDVLFMTATPIPRTLAITAFGEMDVSIIDELPAGRKEIETYWVKHQ MLDRVIGFMEKEIDKGHQVYIICPLIEESEKLDVQNAIDVFNILQNKWGTKYIPGLMH GKLLPADKEQIMRDFNDKKIDCLVSTTVVEVGVNVPNATMMVIYDADRFGLAQLHQLR GRVGRGVDQSYCILIADPKTEVGKERMMIMSETNDGFVVSERDLELRGPGDFFGRKQS GVPEFKVADMVHDYRVLEIARQDAVHMIFEEDMLENKNYEKLVALLEEEGVFTEQKLD " misc_feature complement(1884879..1886894) /locus_tag="lmo1811" /note="RecG-like helicase [Replication, recombination and repair]; Region: RecG; COG1200" /db_xref="CDD:440813" gene complement(1886887..1887777) /locus_tag="lmo1812" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985916" CDS complement(1886887..1887777) /locus_tag="lmo1812" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="L-serine dehydratase" /protein_id="NP_465337.1" /db_xref="GeneID:985916" /translation="MFRTVAELVDIAERENLTIAEIMIKREMNISGLPREEITAAMER NLDIMEEAIREGEAGVTSTTGLTGGDAVLMQDYIKKGNFLSGEVLLDSVAKAIATNEV NASMGVICATPTAGSAGVVPGVLFSLKDRLEMTREDMVNFLFTAGAFGYVVANNAFIS GAAGGCQAEIGSASAMASAAIVAAAGGTPEQSAHAMAMTMKNMLGLVCDPVAGLVEVP CVKRNALGSSQAIISADMALAGIKSRIPCDEVIEAMHRVGLQMPSSLRETAEGGLAAT PTGRAIQRKIFGLSPEDKRE" misc_feature complement(1886914..1887777) /locus_tag="lmo1812" /note="Serine dehydratase alpha chain; Region: SDH_alpha; cl27283" /db_xref="CDD:452735" regulatory complement(1887786..1887793) /regulatory_class="ribosome_binding_site" regulatory complement(1887837..1887869) /regulatory_class="terminator" gene complement(1887913..1888575) /locus_tag="lmo1813" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985914" CDS complement(1887913..1888575) /locus_tag="lmo1813" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoglycerate dehydrogenase" /protein_id="NP_465338.1" /db_xref="GeneID:985914" /translation="MKFNSVFDIIGPVMIGPSSSHTAGASRIGAIARAVFNEQPSQVD IHLYGSFAKTYKGHGTDVALIGGLLGFEPDDPRMKESPKLAEEWGMRIQFIEEVEEPP HPNTVKLVLKHGMQQMTLIGASIGGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAI AAVSSVIADHKINIGQMKVSRKVKGDEALMVIEVDQQVEQALISKIAELSGIYQVASV MI" misc_feature complement(1887958..1888575) /locus_tag="lmo1813" /note="L-serine dehydratase, iron-sulfur-dependent, beta subunit; Region: sda_beta; TIGR00719" /db_xref="CDD:129802" gene complement(1888615..1890273) /locus_tag="lmo1814" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985909" CDS complement(1888615..1890273) /locus_tag="lmo1814" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465339.1" /db_xref="GeneID:985909" /translation="MSIYQLDSEKFAAMIALGAENLAKNADFVDSLNVFPVPDGDTGT NMNLSMTSGAEEVAKNDKETISAVGANLAKGLLMGARGNSGVILSQLFRGFSKAIENK ETLNAEEFAGAFVKGVETAYKAVMKPVEGTILTVAREAAKAGVAAANEHQDIELVMEA ILKQGKVALEKTPDLLPVLKEVGVVDSGGQGLIIIYEGFYGALTGKMAEAPDYMASMG ELINAEHHRHVQDFMSTEDIHFGYCTEIIVKINENKPGQKPFDEEQFRQDLSKLGDSL LVAADDEVVKVHVHVEHPGEVLNYGQQYGSLLKMKVENMREQHNEIVGDDKAPAKEKA AYGIVTVSAGEGLKKLFESMGVSVVLSGGQTMNPSTEDIVKAIESANAEQVFVLPNNK NIQMAAEQAAQILGDDKVQIIPTKTIPQGLTAVLSFQADQDFLANAEAMKAAIEDVAS GQVTTAVRDTTVEGVEIKKDSFIGMVEGKIKVSCATLEEAAYETLEKLLDDDSEIVTI IVGEDSDTTKAETLADKVTEAFPDVEVEIHEGDQPVYPYIFAVE" misc_feature complement(1888618..1890258) /locus_tag="lmo1814" /note="Predicted kinase related to dihydroxyacetone kinase [General function prediction only]; Region: YloV; COG1461" /db_xref="CDD:441070" gene complement(1890288..1890653) /locus_tag="lmo1815" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985911" CDS complement(1890288..1890653) /locus_tag="lmo1815" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465340.1" /db_xref="GeneID:985911" /translation="MAIEIDTKLGKIDITSDVIATIAGGAAEENFGIVGMASRHQIRD GLTDILRRENYTKGVIVRQEEEGIHIDMYIIVSFGTKISEVAHNVQERVKYTLEKTLG ITVESVNIYVQGVRVIKES" misc_feature complement(1890294..1890638) /locus_tag="lmo1815" /note="Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family [Function unknown]; Region: YloU; COG1302" /db_xref="CDD:440913" regulatory 1890937..1890942 /regulatory_class="ribosome_binding_site" gene 1890951..1891139 /gene="rpmB" /locus_tag="lmo1816" /db_xref="GeneID:985895" CDS 1890951..1891139 /gene="rpmB" /locus_tag="lmo1816" /experiment="EXISTENCE:[PMID:19448609]" /note="required for 70S ribosome assembly" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L28" /protein_id="NP_465341.1" /db_xref="GeneID:985895" /translation="MAKECVITGRKSRSGNKRSHAMNSSKRTWKANLQKVRILVNGKP KKVWVSARALKSGKVERV" misc_feature 1890951..1891136 /gene="rpmB" /locus_tag="lmo1816" /note="Ribosomal protein L28 [Translation, ribosomal structure and biogenesis]; Region: RpmB; COG0227" /db_xref="CDD:439997" regulatory 1891157..1891180 /regulatory_class="terminator" regulatory complement(1891208..1891228) /regulatory_class="terminator" gene complement(1891236..1891880) /locus_tag="lmo1817" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985910" CDS complement(1891236..1891880) /locus_tag="lmo1817" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465342.1" /db_xref="GeneID:985910" /translation="MKTINIMVGGPASEIPDLAQYTSGEISWIGVDRGAKRLLDRGII PTIAMGDFDSLSKEELTYLKTKVADVLEFPAEKDETDTEIGLSWAMEQKPDKIRIFGA TGGRLDHLLANLMMLTKPKFLSAVPVVEMIDRYNYIKMYTPGSYTIEKLPDKKYVAFT TMRDVTGLTLKGFAYPLENATYPVGSALSSNEFVGQMGEFSFKSGMILLTQSND" misc_feature complement(1891245..1891871) /locus_tag="lmo1817" /note="Thiamine pyrophosphokinase; Region: TPK; cd07995" /db_xref="CDD:153431" misc_feature complement(order(1891308..1891313,1891314..1891316, 1891350..1891352,1891356..1891358,1891542..1891544, 1891554..1891556,1891563..1891571,1891575..1891577, 1891635..1891652,1891719..1891724,1891728..1891730, 1891782..1891790,1891851..1891859)) /locus_tag="lmo1817" /note="active site" /db_xref="CDD:153431" misc_feature complement(order(1891251..1891253,1891311..1891313, 1891317..1891319,1891392..1891397,1891401..1891403, 1891407..1891409,1891413..1891415,1891467..1891469, 1891473..1891475,1891536..1891541,1891545..1891568, 1891572..1891574,1891632..1891634,1891644..1891652, 1891761..1891763,1891770..1891772,1891782..1891784)) /locus_tag="lmo1817" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:153431" misc_feature complement(order(1891308..1891313,1891314..1891316, 1891350..1891352,1891356..1891358,1891641..1891652, 1891728..1891730)) /locus_tag="lmo1817" /note="thiamine binding site [chemical binding]; other site" /db_xref="CDD:153431" regulatory complement(1891911..1891932) /regulatory_class="terminator" gene complement(1891944..1892600) /locus_tag="lmo1818" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985908" CDS complement(1891944..1892600) /locus_tag="lmo1818" /EC_number="5.1.3.1" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate" /codon_start=1 /transl_table=11 /product="ribulose-phosphate 3-epimerase" /protein_id="NP_465343.1" /db_xref="GeneID:985908" /translation="MGKIAPSILSADFATLARDIKEVENCGADYIHIDVMDGHFVPNI TFGPAVVQAIRPETKLPLDVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQL IRSYGVKAGAVLNPATPIDVLQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKE IVDKKGLDIEIEVDGGVDHETAKLCRDAGANVFVAGSYIYGNKNRQTPIDKLRAIVGE " misc_feature complement(1891947..1892594) /locus_tag="lmo1818" /note="Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; Region: Rpe; COG0036" /db_xref="CDD:439806" gene complement(1892603..1893478) /locus_tag="lmo1819" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985912" CDS complement(1892603..1893478) /locus_tag="lmo1819" /experiment="EXISTENCE:[PMID:19448609]" /note="EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity" /codon_start=1 /transl_table=11 /product="ribosome-associated GTPase" /protein_id="NP_465344.1" /db_xref="GeneID:985912" /translation="MLEGQIIKALSGFYYVFSEGKVYQCRARGNFRKRNISPLVGDDV EFQIENKTDGYILDVMSRENALVRPPVANIDIAILVFSAVEPDFSTNLADRFLVAIEK EDIKPVICISKMDLASESEKEQIAVYKDIYEAIGYDVFVTNDEPDKEAIKDYISGKTA VIAGQSGVGKSTLLNSLNSDLTLKTAEISNSLGRGKHTTRHVELMPIGDGFVADTPGF SSIEWDDLQPETLQFCFPEIEDRRSGCKYRGCMHENEPSCAVKTAVEANEIAEFRYKH YIQILQELKNRKPRY" misc_feature complement(1892609..1893475) /locus_tag="lmo1819" /note="GTPase RsgA; Reviewed; Region: PRK00098" /db_xref="CDD:234631" regulatory complement(1892609..1892614) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1819" regulatory complement(1893483..1893488) /regulatory_class="ribosome_binding_site" gene complement(1893497..1895464) /locus_tag="lmo1820" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985900" CDS complement(1893497..1895464) /locus_tag="lmo1820" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="serine/threonine protein kinase" /protein_id="NP_465345.1" /db_xref="GeneID:985900" /translation="MMIGKRLSDRYKILHAIGGGGMANVYLAHDIILDRDVAVKILRI DLADESNLIRRFQREAQSATSLVHPNIVSVYDVGEENDLHYIVMEHVDGMDLKQYIHE NHPISYEKAVDIMLQIVSAVAIAHQHHIIHRDLKPQNILIDHDGVVKITDFGIAMALS ETSITQTNSLLGSVHYLSPEQARGGMATQKSDIYSLGIVLYELLTGKVPFDGESAVSI AIKHLQADIPSAREQNPEIPQSLENIIIKATAKDPFLRYQNAEEMEKDLQTCLNKDRL NEPKYVFPTDDGDTKAIPIIATKDTMQNLDKTIVPEGKVAAAEVVPEEKKDKKKKKMS KKKKIALIVSSVIIIFIIGILLLWLLGKSPDEVAVPDVSGKTEDQAVALLQKEGFVIG KTAEKNSDEVDEGKVINTDPEAGEMKEKGTKINLFVSIGSKKITMDDYTGRSYTDTKA LLEEQGFKNISSEEAYSSEIEKGLIISQTPTQGTEVVAKSTDVKFVVSKGAEPITLKD LRGYTKTAVEDYASPLGLKVSSKEENSSTVEKGQVISQSPSAGTAMNSGDTIEIVISA GPKEKQVKEVTKTFNIPYTPSDEENPQPQKIQIYIQDKDHSMTSAYREMSITQNTSVE ITFQIEEGSSAGYKIISDDKVIDEGTVPYPN" misc_feature complement(1893770..1895458) /locus_tag="lmo1820" /note="Stk1 family PASTA domain-containing Ser/Thr kinase; Region: PknB_PASTA_kin; NF033483" /db_xref="CDD:468045" misc_feature complement(1894181..1894360) /locus_tag="lmo1820" /note="PASTA domain [structural motif]; Region: PASTA domain" /db_xref="CDD:275384" misc_feature complement(1893974..1894159) /locus_tag="lmo1820" /note="PASTA domain [structural motif]; Region: PASTA domain" /db_xref="CDD:275384" misc_feature complement(1893773..1893952) /locus_tag="lmo1820" /note="PASTA domain [structural motif]; Region: PASTA domain" /db_xref="CDD:275384" gene complement(1895461..1896219) /locus_tag="lmo1821" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985901" CDS complement(1895461..1896219) /locus_tag="lmo1821" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoprotein phosphatase" /protein_id="NP_465346.1" /db_xref="GeneID:985901" /translation="MHAEFRTDRGRIRHHNEDNGGVFENKDNQPIVIVADGMGGHRAG DVASEMAVRLLSDAWKETTALLTAEEIETWLRKTIQEVNKEIVLYAESEMDLNGMGTT LVAAIMAQSQVVIANVGDSRGYLLQNHVLRQLTEDHSLVHELLRTGEISKEDAMNHPR KNILLRALGVEGKVEVDTFVVPFQTSDTLLLCSDGLTNMVPETEMEEILKSKRTLSEK ADVFITKANSYGGEDNITVLLVERDLTQKGRDAS" misc_feature complement(1895497..1896204) /locus_tag="lmo1821" /note="Stp1/IreP family PP2C-type Ser/Thr phosphatase; Region: Stp1_PP2C_phos; NF033484" /db_xref="CDD:468046" regulatory complement(1895473..1895478) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1821" gene complement(1896242..1897576) /locus_tag="lmo1822" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985898" CDS complement(1896242..1897576) /locus_tag="lmo1822" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="RNA-binding Sun protein" /protein_id="NP_465347.1" /db_xref="GeneID:985898" /translation="MKKQKTVRAIALELIIKIENNQSYSHLLINDALKKQKLNPLDKG LLTELVYGTTQRKITLDYYLAPFLNKEPDNWVKNLLRMSVYQLTYLDKVPEHAILNEA GDIAKNMGHQGVTKFVNGVLRNVIRKGVPSIDAIKDPVQKIAVETSLPEWLAKRWADQ YGIEQLREIGLAFLVAPHQSIRVNQTEIPTEQLIKELNDQGITVTRNEFIEEALLVEK GSVAETKAYKDGKCSIQDESSMLAAYALQLEDNLTVLDACAAPGGKTTHIAEKMHGTG MVHALDIHEKKTKLIDEAAKRLQLLNIRTAHLDARTASTMFEPETFDRILVDAPCSGF GVLRRKPDIKYAKTEKDIHKLAEIQLAILDDVSQLVKENGILVYSTCTIDKEENETVL RAFLEKHPDFTLEPVVLPEKLAQIKKDDFIQLLPTDIGSDGFFVSSLRKVKS" misc_feature complement(1896248..1897570) /locus_tag="lmo1822" /note="16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB; Region: PRK14902" /db_xref="CDD:237857" gene complement(1897577..1898515) /gene="fmt" /locus_tag="lmo1823" /db_xref="GeneID:985899" CDS complement(1897577..1898515) /gene="fmt" /locus_tag="lmo1823" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="methionyl-tRNA formyltransferase" /protein_id="NP_465348.1" /db_xref="GeneID:985899" /translation="MTKIIFMGTPEFSVPVLTQLASTYDVVAVVTQPDRPVGRKRVLT PPPVKKAALELAIPVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHG AINVHASLLPEYRGGAPVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDN TGTMFDKLSILGAELLMDTLPDFLAGKITATPQDPEKVTFARNISREQEKIDWTKPGR TIFNQIRGLSPWPVAYTTLEEKPFKIWEATYEDTKEGGEPGAILADKTTLKIVAGDGT LIVPTVIQPAGKPKMDVHSFMTGAGRNLSKTTRFGE" misc_feature complement(1897586..1898509) /gene="fmt" /locus_tag="lmo1823" /note="Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]; Region: Fmt; COG0223" /db_xref="CDD:439993" regulatory complement(1897585..1897592) /regulatory_class="ribosome_binding_site" /gene="fmt" /locus_tag="lmo1823" regulatory complement(1898522..1898527) /regulatory_class="ribosome_binding_site" gene complement(1898529..1900922) /gene="priA" /locus_tag="lmo1824" /db_xref="GeneID:985890" CDS complement(1898529..1900922) /gene="priA" /locus_tag="lmo1824" /experiment="EXISTENCE:[PMID:19448609]" /note="binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity" /codon_start=1 /transl_table=11 /product="primosome assembly protein PriA" /protein_id="NP_465349.1" /db_xref="GeneID:985890" /translation="MINIAKVIVDVPAMQVDRPFDYYIPEDLEELIRPGMRVSVPFGN RKIQGFVIALGETEENPKLKGIDGVMDLAPVLNEELMELGDWLAEDTLSFRVSAYQAM LPAALRAKYEKYFLRLDEENEELEQLFEGYETLDWKVAEARGLLKQIGKWVREGSVEV VYQVKNKITNKKVRVVSCLKAPHQLAEIIEDMPKNAKAQSRVLAFFQALEGNEITAAE LKKQAETTDATIKKLVDLGMLSIQEKIISRDPYENHQFEKSESLQLLPDQQTACKKIT AATGQETFLIHGVTGSGKTEIYLQTIEAKLKEGKEAIVLVPEISLTPQMVERFKSRFG SEVAVLHSALSSGEKYDEWRKIERKEARVVVGARSAVFAPFENLGIIIIDEEHEASYK QEDNPRYHARDVAIWRATKYQCPVVLGSATPSLESFARAKKGVYTLIELPSRVNDRAM PEVSVVDMREELRKENRTEFSTELLEKIKDRIAKKEQTVLMLNRRGYSSFVMCRDCGY VVECPNCDISLTYHQSSNQMKCHYCGHEERVPQKCPSCEGEHIRYFGTGTQKVEESLT KLIPEARVIRMDVDTTRTKGAHEKLLKSFRNHEADILLGTQMIAKGLDFPDITLVGVL NADTMLHLPDFRASERTFQLLTQVSGRAGRHERTGEVIVQSYNPEHYSIEFAKKHDFI GFYNHEMQLRKMGSYPPFYYLTMINVSDENEMKAIRTIQEMAQFLRGKLGPDAVILGP VPSTITRIKNKYRYQCIIKYKIEPNLKKELKTLITHYQKDQQKGLTITIDVQPYVLM" misc_feature complement(1898541..1900913) /gene="priA" /locus_tag="lmo1824" /note="Primosomal protein N' (replication factor Y) - superfamily II helicase [Replication, recombination and repair]; Region: PriA; COG1198" /db_xref="CDD:440811" gene complement(1900927..1902126) /locus_tag="lmo1825" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985891" CDS complement(1900927..1902126) /locus_tag="lmo1825" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="pantothenate metabolism flavoprotein" /protein_id="NP_465350.1" /db_xref="GeneID:985891" /translation="MQGKNILLAVSGGIAVYKAVALTSKLTQAGANVKVMMTAHAQEF VPPLSFQVLSKNDVYTDTFDEKKSSVVAHIDLADWADLVIVAPATANVIGKMANGIAD DMVTTTILATEAPVWVAPAMNVHMIQHPAVIRNINRLYADGVRFIEPEEGYLACGYVG RGRLEEPEKIVLRIAEFFQEDKNLLQGKNVLVTAGATREKLDPVRYFTNHSTGKMGFS IAESAARHGANVTLITTSKALPVPHGVEAIYVESAEEMHQAVNERKVSQDIFVMTAAV ADYTPAQVSDQKIKKQPGDFTIAMKRTKDILLEIGQHKTSEQVVIGFAAETENVEANA RKKLTSKNADMIVANNISEAGAGFSGDTNIVTFYRKDGSSEALPILDKKEVAEHIIKE AANFLRK" misc_feature complement(1900930..1902126) /locus_tag="lmo1825" /note="Phosphopantothenoylcysteine synthetase/decarboxylase CoaBC [Coenzyme transport and metabolism]; Region: CoaBC; COG0452" /db_xref="CDD:440221" regulatory complement(1902253..1902272) /regulatory_class="terminator" gene complement(1902281..1902484) /gene="rpoZ" /locus_tag="lmo1826" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985894" CDS complement(1902281..1902484) /gene="rpoZ" /locus_tag="lmo1826" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1826; Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit omega" /protein_id="NP_465351.1" /db_xref="GeneID:985894" /translation="MLYPSIDNLLLKIDSKYSLVTVAAKRARYMQLENDKGVLPSYQS DKFVGKALEEIHAGKLVLQNDDK" misc_feature complement(1902287..1902484) /gene="rpoZ" /locus_tag="lmo1826" /note="DNA-directed RNA polymerase, subunit K/omega [Transcription]; Region: RpoZ; COG1758" /db_xref="CDD:441364" gene complement(1902484..1903101) /gene="gmk" /locus_tag="lmo1827" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985464" CDS complement(1902484..1903101) /gene="gmk" /locus_tag="lmo1827" /experiment="EXISTENCE:[PMID:19448609]" /note="Essential for recycling GMP and indirectly, cGMP" /codon_start=1 /transl_table=11 /product="guanylate kinase" /protein_id="NP_465352.1" /db_xref="GeneID:985464" /translation="MTERGLLIVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLP REGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYGTPLEYVEEKLAAGVDIFLE IEVQGAMQVRKAMPEGIFIFLTPPDLSELKNRIIGRGTESMEVVEERMETAKKEIEMM ASYDYAVVNDVVANAVQKIKGIVETEHLKTERVIHRYKKMLEGLQ" misc_feature complement(1902487..1903101) /gene="gmk" /locus_tag="lmo1827" /note="guanylate kinase; Provisional; Region: gmk; PRK00300" /db_xref="CDD:234719" misc_feature complement(order(1902856..1902858,1902871..1902873, 1902940..1902942,1902967..1902969,1902976..1902978, 1902997..1902999,1903048..1903050,1903066..1903068)) /gene="gmk" /locus_tag="lmo1827" /note="catalytic site [active]" /db_xref="CDD:238026" misc_feature complement(order(1903048..1903050,1903066..1903068)) /gene="gmk" /locus_tag="lmo1827" /note="G-X2-G-X-G-K; other site" /db_xref="CDD:238026" regulatory complement(1902495..1902500) /regulatory_class="ribosome_binding_site" /gene="gmk" /locus_tag="lmo1827" regulatory complement(1903109..1903114) /regulatory_class="ribosome_binding_site" gene complement(1903120..1903995) /locus_tag="lmo1828" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985886" CDS complement(1903120..1903995) /locus_tag="lmo1828" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465353.1" /db_xref="GeneID:985886" /translation="MVKSMTGFGRATKEFEAFKVTIELKAVNHRYSEFLFRMPKQLAY LEGKLKKTISKQIKRGRIEVFFSITGEQIAKRELHIDWDLADSYYRFIKQASARYELQ ELPTMGDLLQEQAYLSIEEEVEASSELERLVLETLARATERLDEMRSMEGAELLLYFK QHLAALENSLEIIQAEIPNTEKHYQEKIETRLQNVVGDQFDPSIVLTEVAMLLEKADI NEEVERTKSHLKQFYGIILLEEPIGRKLDFLIQEMNREVNTIGSKASSLKITEQVVEM KTTLEKIREQVQNVE" misc_feature complement(1903123..1903995) /locus_tag="lmo1828" /note="Uncharacterized stationary-phase protein YicC, UPF0701 family [Function unknown]; Region: YicC; COG1561" /db_xref="CDD:441169" regulatory complement(1904004..1904009) /regulatory_class="ribosome_binding_site" regulatory 1904137..1904142 /regulatory_class="ribosome_binding_site" gene 1904152..1905864 /locus_tag="lmo1829" /db_xref="GeneID:985887" CDS 1904152..1905864 /locus_tag="lmo1829" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="fibronectin-binding proteins" /protein_id="NP_465354.1" /db_xref="GeneID:985887" /translation="MAFDAMFLKAMTEELAEHGESGRIMKIHQPFSHELVLYIRKNRE NKRLLISSHPSYARIQWTDDIPENPATPPMFCMLLRKYLEGAIIESITQLPNERILQF SIRGKDDIGENRFCDLFVEIMGRHSNITLVDRAKNVIVDCIKHVSPAQNSYRTLLPGA TYVLPPATDKLNPFEVTSEQILDRLDFSAGRIDKQLVQNFAGFSPLLAREIVFRAGNL TADSLVAAFFEVMGLVNDHLGSAAVPNEWRIQNKEDYYFFSLRHVDAEITEFANLSTL LDHFYIGKARRDRVHQFAHDLEKLLSNELARSRLKIEKLENTLLETEKADVYRIQGEL LTANLHLMERGMEEITVENFYDDMKKMTIPLDTRKTPSANAQSYFSRYQKLRNAVEVV KEQIALTKEEITYLESVESQLETSGPQDVEEIRQELAEQGYLRYKQKKGSRKKATLPA PEKYTSSTGLTILVGKNNKQNDYLTNKLARNNEYWFHVKDLPGSHVVIQSNNPDETSI TEAAMIAAYYSKARLSATVPVDGTLVKHVKKPNGAKPGYVIYDNQTTYFVTPDEKLVL ELKN" misc_feature 1904152..1905858 /locus_tag="lmo1829" /note="Ribosome quality control (RQC) protein RqcH, Rqc2/NEMF/Tae2 family, contains fibronectin-(FbpA) and RNA- (NFACT) binding domains [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: RqcH; COG1293" /db_xref="CDD:440904" regulatory 1905865..1905883 /regulatory_class="terminator" regulatory 1905938..1905943 /regulatory_class="ribosome_binding_site" gene 1905952..1906551 /locus_tag="lmo1830" /db_xref="GeneID:984389" CDS 1905952..1906551 /locus_tag="lmo1830" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase" /protein_id="NP_465355.1" /db_xref="GeneID:984389" /translation="MKILLIGASGTLGSAVKDRLEKKAEVITAGRHSGDVTVDITSID SIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLN DKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEES WDKLESFFQGFVPVPAAKVARAFEKSVFGAQTGESYKVY" misc_feature 1905952..1906548 /locus_tag="lmo1830" /note="short chain dehydrogenase; Provisional; Region: PRK07578" /db_xref="CDD:236057" misc_feature order(1905970..1905972,1905976..1905987,1906039..1906047, 1906063..1906071,1906135..1906143,1906204..1906206, 1906279..1906287,1906324..1906326,1906336..1906338, 1906411..1906422,1906426..1906431) /locus_tag="lmo1830" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:212497" misc_feature order(1906159..1906164,1906171..1906173,1906177..1906182, 1906186..1906188,1906198..1906200,1906222..1906227, 1906234..1906239,1906297..1906299,1906303..1906320, 1906327..1906332,1906339..1906344,1906351..1906356, 1906360..1906368,1906372..1906377,1906381..1906383) /locus_tag="lmo1830" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:212497" regulatory complement(1906560..1906588) /regulatory_class="terminator" gene complement(1906592..1907221) /gene="pyrE" /locus_tag="lmo1831" /db_xref="GeneID:985882" CDS complement(1906592..1907221) /gene="pyrE" /locus_tag="lmo1831" /EC_number="2.4.2.10" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate" /codon_start=1 /transl_table=11 /product="orotate phosphoribosyltransferase" /protein_id="NP_465356.1" /db_xref="GeneID:985882" /translation="MSIEKQVAEQLLEIKAVFLKPNEPFTWASGIKSPIYCDNRLTLG FPKVRQFIAKSLAEKIKQTFGEIDVVAGTATAGIPHAAWVSDLLDLPMVYVRSKAKEH GKGNQIEGPISKGQKVVVIEDLISTGGSSLKAVEALEEAGAEVVGIAAIFTYGLAKGK QLLEESGTKLVTLTNYDELIEVALNENYVTGEDMETLKEWKKNPEKWGK" misc_feature complement(1906607..1907221) /gene="pyrE" /locus_tag="lmo1831" /note="Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]; Region: PyrE; COG0461" /db_xref="CDD:440229" gene complement(1907218..1907919) /gene="pyrF" /locus_tag="lmo1832" /db_xref="GeneID:985880" CDS complement(1907218..1907919) /gene="pyrF" /locus_tag="lmo1832" /experiment="EXISTENCE:[PMID:19448609]" /note="type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase" /codon_start=1 /transl_table=11 /product="orotidine 5'-phosphate decarboxylase" /protein_id="NP_465357.1" /db_xref="GeneID:985880" /translation="MNKPIIALDFQTYEEVETFLAKFSGETLSVKVGMELFYSNGPVI VEKIKQQNHEIFLDLKLHDIPNTVKSAMIGLAKLGVDMVNVHAAGGKKMMEAAKEGLE IGSPSGKRPKIIAVTQLTSTSETDMQTEQLIKTSLLESVMHYSNLSKQAGLDGVVCSA LEAEDIKQQNGADFLRVTPGIRLASDTADDQIRVVTPEKARLIGSSNIVVGRSITRAN DPVAAYNQVLKEWNA" misc_feature complement(1907221..1907919) /gene="pyrF" /locus_tag="lmo1832" /note="orotidine-5'-phosphate decarboxylase; Region: PRK00230" /db_xref="CDD:234695" misc_feature complement(order(1907284..1907289,1907383..1907385, 1907560..1907565,1907740..1907742,1907746..1907748, 1907821..1907823,1907827..1907829,1907893..1907895, 1907899..1907901)) /gene="pyrF" /locus_tag="lmo1832" /note="active site" /db_xref="CDD:240076" misc_feature complement(order(1907284..1907286,1907500..1907502, 1907563..1907565,1907623..1907625,1907656..1907664, 1907707..1907712,1907719..1907724,1907731..1907736, 1907740..1907745,1907812..1907817,1907821..1907823)) /gene="pyrF" /locus_tag="lmo1832" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:240076" regulatory complement(1907229..1907234) /regulatory_class="ribosome_binding_site" /gene="pyrF" /locus_tag="lmo1832" gene complement(1907916..1908830) /gene="pyrD" /locus_tag="lmo1833" /db_xref="GeneID:985875" CDS complement(1907916..1908830) /gene="pyrD" /locus_tag="lmo1833" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits" /codon_start=1 /transl_table=11 /product="dihydroorotate dehydrogenase" /protein_id="NP_465358.1" /db_xref="GeneID:985875" /translation="MNRLAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNELGAIMA KAVTPEPRLGNPTPRVAETASGMLNAIGLQNPGLEHVLAHELPFLEQFETPIIANVAG ATEDDYVQVCARIGESKAVKAIELNISCPNVKHGGIAFGTDPEVAHRLTKAVKNVASV PVYVKLSPNVADIVSIAQAIEAAGADGLTMINTLLGMRIDLKTRKPIIANGTGGLSGP AIKPVAIRMIHQVRAVSNIPIIGMGGVQTVDDVLEFLIAGADAVAVGTMNFTDPFICP KLISELPKRMDALGISSLQDLKKERTNQ" misc_feature complement(1907940..1908824) /gene="pyrD" /locus_tag="lmo1833" /note="dihydroorotate dehydrogenase; Region: PRK07259" /db_xref="CDD:235982" misc_feature complement(order(1908012..1908017,1908021..1908023, 1908177..1908179,1908609..1908611,1908645..1908647, 1908651..1908656,1908672..1908674,1908696..1908698, 1908732..1908734,1908741..1908746)) /gene="pyrD" /locus_tag="lmo1833" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:240091" misc_feature complement(order(1908033..1908038,1908099..1908101, 1908180..1908182,1908252..1908260,1908336..1908338, 1908441..1908443,1908450..1908452,1908624..1908626, 1908693..1908695)) /gene="pyrD" /locus_tag="lmo1833" /note="active site" /db_xref="CDD:240091" misc_feature complement(order(1908033..1908038,1908099..1908101, 1908180..1908182,1908255..1908260,1908336..1908338, 1908450..1908452,1908624..1908626,1908693..1908695)) /gene="pyrD" /locus_tag="lmo1833" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:240091" misc_feature complement(order(1907940..1907942,1908060..1908065, 1908072..1908074,1908153..1908158,1908162..1908170, 1908177..1908179,1908213..1908221,1908228..1908248, 1908321..1908323,1908405..1908407,1908636..1908644)) /gene="pyrD" /locus_tag="lmo1833" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:240091" misc_feature complement(order(1908252..1908257,1908444..1908446, 1908450..1908452,1908624..1908626)) /gene="pyrD" /locus_tag="lmo1833" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:240091" regulatory complement(1907930..1907935) /regulatory_class="ribosome_binding_site" /gene="pyrD" /locus_tag="lmo1833" gene complement(1908827..1909591) /gene="pyrDII" /locus_tag="lmo1834" /db_xref="GeneID:985877" CDS complement(1908827..1909591) /gene="pyrDII" /locus_tag="lmo1834" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dihydroorotate dehydrogenase electron transfer subunit" /protein_id="NP_465359.1" /db_xref="GeneID:985877" /translation="MLQTEMKVIQQTEIADKVYELILTGECVAGMSPGQFLMLKPSRS DLLMRRPISICSYDKTAKTCILLYRVEGDGTRDFSKLSEGDTIDVLGPLGKGFDIDTT PAPKTALLIGGGIGVPPMYQLGKELAEKGVQVMFVNGFQSAKDSFYAQEMAEYGTVHI ATVDGSLGTQGFVTDITKNFPEEPDVIYSCGPKAMLQAVKASFPETKTYLSLEERMAC GIGACYACVCPKADDTNKQFKVCEDGPVFRADEVKL" misc_feature complement(1908848..1909570) /gene="pyrDII" /locus_tag="lmo1834" /note="FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to...; Region: DHOD_e_trans; cd06218" /db_xref="CDD:99814" misc_feature complement(order(1908947..1908952,1909247..1909249, 1909361..1909369,1909385..1909393,1909433..1909444, 1909448..1909450)) /gene="pyrDII" /locus_tag="lmo1834" /note="FAD binding pocket [chemical binding]; other site" /db_xref="CDD:99814" misc_feature complement(order(1909433..1909438,1909442..1909444)) /gene="pyrDII" /locus_tag="lmo1834" /note="FAD binding motif [chemical binding]; other site" /db_xref="CDD:99814" misc_feature complement(order(1909310..1909312,1909316..1909318, 1909340..1909342,1909352..1909354,1909361..1909363, 1909370..1909372)) /gene="pyrDII" /locus_tag="lmo1834" /note="phosphate binding motif [ion binding]; other site" /db_xref="CDD:99814" misc_feature complement(order(1909235..1909237,1909241..1909252, 1909262..1909264)) /gene="pyrDII" /locus_tag="lmo1834" /note="beta-alpha-beta structure motif; other site" /db_xref="CDD:99814" misc_feature complement(order(1909016..1909021,1909169..1909177, 1909244..1909249)) /gene="pyrDII" /locus_tag="lmo1834" /note="NAD binding pocket [chemical binding]; other site" /db_xref="CDD:99814" misc_feature complement(order(1908869..1908871,1908914..1908916, 1908923..1908925,1908938..1908940)) /gene="pyrDII" /locus_tag="lmo1834" /note="Iron coordination center [ion binding]; other site" /db_xref="CDD:99814" regulatory complement(1908838..1908843) /regulatory_class="ribosome_binding_site" /gene="pyrDII" /locus_tag="lmo1834" regulatory complement(1909599..1909605) /regulatory_class="ribosome_binding_site" gene complement(1909614..1912826) /gene="carB" /locus_tag="lmo1835" /db_xref="GeneID:985876" CDS complement(1909614..1912826) /gene="carB" /locus_tag="lmo1835" /EC_number="6.3.5.5" /experiment="EXISTENCE:[PMID:19448609]" /note="four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthetase" /protein_id="NP_465360.1" /db_xref="GeneID:985876" /translation="MPKRDDIKTILVIGSGPIVIGQAAEFDYAGTQACLSLKEEGYRV VLVNSNPATIMTDAEMADKVYIEPITLDFVSRIIRKERPDAILPTLGGQTGLNMAMEL SAAGILDECNVEVLGTDLTAIKKAEDREAFRDLMNELGEPVPESDIIHNLDEAYAFVE RIGYPVIVRPAYTLGGSGGGICHNEQELIETVTSGLKLSPVTQCLLEKSIAGFKEVEY EVMRDANNNAMVVCNMENIDPVGIHTGDSIVVAPSQTLSDREYQLLRDVSLKIIRALE IEGGCNVQLALDPDSYNYYVIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEV RNPVTGTTFAHFEPTLDYVVAKIPRFAFDKFEQADRRLGTQMKATGEVMAIGRSWEEA LLKAVRSLEIGADHLLLEEAENADEATLERKICFPEDDRLFFLAAALRRGQTIEQLHE KTKIDLFFLYKLSKTIELENRIKENPQNQEILAEAKQAGFSDAFLATCWNVDEQAIYD LRKAQNLFPVYKMVDTCAAEFESTTPYFYSTYEEENESTRSAKESVIVLGSGPIRIGQ GVEFDYATVHSVWAIQQAGYEAIIINNNPETVSTDFSISDKLYFEPLTLEDVMHVIEI EQPLGVVVQFGGQTAINLADGLAKRGVKILGTSLEDTDRAENRDAFEKALEILQIPQP AGKTATSVEEAITVATDIGYPVLVRPSYVLGGRAMEIVESEEALKHYMTNAVKVNPKH PVLVDRYVSGQEVEVDAISDGVNVLIPGIMEHIERAGVHSGDSIAVYPAQRLSIQVKN TIVDYTTRLATGLNIIGMLNIQYVVDGEEVFVIEVNPRSSRTAPFLSKITEIPMANVA TRVILGENLIDLGYTPGLAPEKQEIFVKVPVFSFAKLRSVDTSLGPEMKSTGEVMGKD VTLEKALYKGFVASGTTMHDYGTVLLTVADRDKEEAVELAKRFNRIGFTIMATKGTAS TLEEASIPVSQVKKIGENQETLIDYIRNGQVTLVVNTLTTGKRPERDGFQIRRESVEN GIPVCTSLDTAEAILRVLESRSFELESMNASEVKQPKSRV" misc_feature complement(1909665..1912826) /gene="carB" /locus_tag="lmo1835" /note="carbamoyl-phosphate synthase large subunit; Region: carB; PRK05294" /db_xref="CDD:235393" gene complement(1912819..1913910) /gene="pyrAa" /locus_tag="lmo1836" /db_xref="GeneID:985872" CDS complement(1912819..1913910) /gene="pyrAa" /locus_tag="lmo1836" /EC_number="6.3.5.5" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers" /codon_start=1 /transl_table=11 /product="carbamoyl phosphate synthase small subunit" /protein_id="NP_465361.1" /db_xref="GeneID:985872" /translation="MTKRILMLEDGNYFIGDAIGSEKETIGEVVFNTGMTGYQETITD PSYYGQIITFTYPLVGNYGVNRDDFESINPAVKGVVVREAAEFASNWRNQITLNEFLK EKGIPGIAGIDTRKLTKLIRKEGTLKGILAAETADKEELLHHLRSVRLPVDQVHEVSS AKAFASPGDGKRVVLVDYGVKSSILRELNKRNCYVTVVPYNTSAEEILAMHPDGVMLS NGPGDPKDVPEALEMIRGIQGKLPLFGICLGHQLFALANGADTFKLKFGHRGANHPVK ELATGRVDFTAQNHGYAVEKDSLIGTDLKVTHIELNDETVEGLAHKEYPAYTVQYHPE ANPGPSDVNYLFDEFMEMMNGKEEGELHA" misc_feature complement(1912849..1913910) /gene="pyrAa" /locus_tag="lmo1836" /note="Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism, Nucleotide transport and metabolism]; Region: CarA; COG0505" /db_xref="CDD:440271" regulatory complement(1912836..1912841) /regulatory_class="ribosome_binding_site" /gene="pyrAa" /locus_tag="lmo1836" gene complement(1913907..1915187) /gene="pyrC" /locus_tag="lmo1837" /db_xref="GeneID:985870" CDS complement(1913907..1915187) /gene="pyrC" /locus_tag="lmo1837" /EC_number="3.5.2.3" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis" /codon_start=1 /transl_table=11 /product="dihydroorotase" /protein_id="NP_465362.1" /db_xref="GeneID:985870" /translation="MYVLKNGQVLNASGKLESKDVLIQNGKVNLIADSIEVTSGEEFD ATGKLITPGFIDVHVHLREPGGEHKETILTGTKAAARGGYTTICSMPNTKPVPDSKEV MESIQAKIKETAKVRVLPYASITTSLGTDELVDFEALKEAGAFAFTDDGVGVQLAGTM YEAMKRAAALDMAIVAHCEDNSLIYGGVVHDGIFAEKEGLKGIPNIAESVQIARDVLL AEAAGCHYHVCHISTKESVRVVRDAKRAGIRVTAEVSPHHLILDEEAIPGNDGNWKMN PPLRSKEDRAALLEGLLDGTIDFIATDHAPHAAEEKNVPMEQAAFGIVGLETAFPLLY THFVKTNEWTLKQLIDWMTVKPAECFKLPYGKLEEGSVADIVVLDLEKEANIDPDTFY SKGKNTPFVGETCIGWPVATFAEGTLVYNEGEIK" misc_feature complement(1913922..1915187) /gene="pyrC" /locus_tag="lmo1837" /note="dihydroorotase; Validated; Region: pyrC; PRK09357" /db_xref="CDD:236479" misc_feature complement(order(1914279..1914281,1914498..1914500, 1914657..1914659,1915008..1915010,1915014..1915016)) /gene="pyrC" /locus_tag="lmo1837" /note="active site" /db_xref="CDD:238642" regulatory complement(1913918..1913923) /regulatory_class="ribosome_binding_site" /gene="pyrC" /locus_tag="lmo1837" gene complement(1915175..1916086) /gene="pyrB" /locus_tag="lmo1838" /db_xref="GeneID:985866" CDS complement(1915175..1916086) /gene="pyrB" /locus_tag="lmo1838" /EC_number="2.1.3.2" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis" /codon_start=1 /transl_table=11 /product="aspartate carbamoyltransferase" /protein_id="NP_465363.1" /db_xref="GeneID:985866" /translation="MKNLLSMEALTVHEIEHLLEQAAQFKRGKKATFNEQTFAVNMFF EPSTRTHTSFEVAEKKLGVEVVSFDAASSSMTKGETLYDTLLTMQAVGVNVAVIRHSE ENYYAGLEKLDIAIVNGGDGCGEHPSQSLLDLFTIKEQFGTFQGLKVAIAGDIRHSRV ANSNMKVLKRLGAELFFSGPREWFDESYLAYGTYLPVDEIVEKVDVMMLLRVQHERHS GTDEFTKESYHEKFGLTEDRAKKLKEDAIIMHPSPVNRDVEIADSLVESEKSRIVTQM TNGVFIRMAILEAILKEQEMRAKLCTY" misc_feature complement(1915202..1916086) /gene="pyrB" /locus_tag="lmo1838" /note="aspartate carbamoyltransferase catalytic subunit; Region: pyrB; PRK00856" /db_xref="CDD:234849" regulatory complement(1915193..1915198) /regulatory_class="ribosome_binding_site" /gene="pyrB" /locus_tag="lmo1838" regulatory complement(1916095..1916100) /regulatory_class="ribosome_binding_site" gene complement(1916166..1917452) /gene="pyrP" /locus_tag="lmo1839" /db_xref="GeneID:985867" CDS complement(1916166..1917452) /gene="pyrP" /locus_tag="lmo1839" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="uracil permease" /protein_id="NP_465364.1" /db_xref="GeneID:985867" /translation="MTETTETVTKPVLDIHERPSFNKWIILSIQHLFTMFGSTIFVPS VTGLSPGVALVSSGLGTLAYLGITRGKIPAYLGSSFTFIAPITALLAAKSGGGPGAVM VGTFSVGVVYAIVSLIVYYAGVDWIQKVLPPIVVGPVIMVIGLSLAPSAAAMAMGTNN GKYSLETLAVAVITLLATIIAMMFFKGFMGLIPILFGFTVGYLTSMAFGMVDYTLIKN ASFFQIPDFSIPFVNIDPVITVTVILSMAPLAFVTMAEHMGHQLLLNRITNKNFFKDP GLHRSLLADGTASIIASFIGGPPVTTYGENIGVLAITKVYSVFVIGGAAVFAILFGFI GYINAVITSVPTAVLGGISLLLFGVIATSGLRMMIENKIDLSVNRNMIIASVVLVVGI GGLTIKSGTFELPGMAMAAIVGIILNLVLPAEHRSA" misc_feature complement(1916193..1917428) /gene="pyrP" /locus_tag="lmo1839" /note="Permease family; Region: Xan_ur_permease; cl23746" /db_xref="CDD:474042" regulatory complement(1917460..1917465) /regulatory_class="ribosome_binding_site" gene 1917471..1917574 /locus_tag="lmos70" /db_xref="GeneID:18245155" misc_RNA 1917471..1917574 /locus_tag="lmos70" /product="PyrR" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245155" regulatory complement(1917479..1917506) /regulatory_class="terminator" gene complement(1917581..1918132) /gene="pyrR" /locus_tag="lmo1840" /db_xref="GeneID:985861" CDS complement(1917581..1918132) /gene="pyrR" /locus_tag="lmo1840" /EC_number="2.4.2.9" /experiment="EXISTENCE:[PMID:19448609]" /note="regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity" /codon_start=1 /transl_table=11 /product="bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase" /protein_id="NP_465365.1" /db_xref="GeneID:985861" /translation="MQKQVVVMDEAAIKRALTRVSYEIIERNKGTKNLALVGIKTRGI YLAERLHKRILEIEGIDVPVGDIDITLYRDDLSFKDDKTREPAVHGTNIPFDINGKKV VLVDDVLYTGRTVRAAMDALMDVGRPAQIHLAVLADRGHRELPIRADYVGKNIPTSGN ERVEVRLTDVDHAEDAVIINKNE" misc_feature complement(1917584..1918129) /gene="pyrR" /locus_tag="lmo1840" /note="Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]; Region: PyrR; COG2065" /db_xref="CDD:441668" regulatory complement(1918141..1918146) /regulatory_class="ribosome_binding_site" gene 1918154..1918262 /locus_tag="lmos71" /db_xref="GeneID:18245156" misc_RNA 1918154..1918262 /locus_tag="lmos71" /product="PyrR" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245156" regulatory 1918349..1918354 /regulatory_class="ribosome_binding_site" gene 1918363..1918593 /locus_tag="lmo1841" /db_xref="GeneID:985862" CDS 1918363..1918593 /locus_tag="lmo1841" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1841" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465366.1" /db_xref="GeneID:985862" /translation="MAISKAKKKRQKLIREGHLNPEIKRSPFALIDLSSKQTKTKKGY LYSKKRKNHQKDDSFFVYFFKFSHFLHINSLK" regulatory 1918667..1918672 /regulatory_class="ribosome_binding_site" gene 1918681..1919505 /locus_tag="lmo1842" /db_xref="GeneID:985864" CDS 1918681..1919505 /locus_tag="lmo1842" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465367.1" /db_xref="GeneID:985864" /translation="MGIMNSLLKQKEMVVKDWLTYYVSVDDPYIFTLKNDHRLMDETG FVLENLFIGMTEDLGKMNAFARELGKAQFITSLGISRILFHIRLLEEFLLDYASEIKT KSANYRELYLFSIKLHQVFSSFTQNLIEGYTHANEQMIVQKENQIIKESTKLIWIAEN VFLLPLIGKITDERAKQITETALFEVCEQPVNYLIIDLSGVQLESPNIGKYIEYFFSS LKLVGVTPIITGMQPQTAKVMVQANLTEQHGIKTFATLRQATKTLMKEKEARNAHK" misc_feature 1919131..1919457 /locus_tag="lmo1842" /note="Sulphate Transporter and Anti-Sigma factor antagonist domain of the 'stressosome' complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation; Region: STAS_RsbR_RsbS_like; cd07041" /db_xref="CDD:132912" regulatory complement(1919482..1919519) /regulatory_class="terminator" gene complement(1919525..1920436) /locus_tag="lmo1843" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985856" CDS complement(1919525..1920436) /locus_tag="lmo1843" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465368.1" /db_xref="GeneID:985856" /translation="MQNETLIIEESHARERVDKVIAEMMGKSRSAIQLMLKNGDITVN GELAKPNYKVQVGDEIHYEVREPEELEVLAEDIPLDIYFEDKDMLVVNKPEGMVVHPS AGHASGTLVNALLFHCDDLSGINGKIRPGIVHRIDKDTSGLLMVAKNDHAHESLAKQL KDKTSDREYIALVHGDIVHQKGTIEAPIGRAKEDRQKMAVVRDGKEARTHFEVLERLP GYTLINCKLDTGRTHQIRVHLKYIGHPLAGDPKYGPKNTIKGNGQFLHAAKLGFDHPT TNERMTFEAPLPSSFEKALKSLRQEEY" misc_feature complement(1919540..1920394) /locus_tag="lmo1843" /note="pseudouridine synthase, RluA family; Region: rluA_subfam; TIGR00005" /db_xref="CDD:161659" gene complement(1920436..1920900) /gene="lspA" /locus_tag="lmo1844" /db_xref="GeneID:985858" CDS complement(1920436..1920900) /gene="lspA" /locus_tag="lmo1844" /EC_number="3.4.23.36" /experiment="EXISTENCE:[PMID:19448609]" /note="lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis" /codon_start=1 /transl_table=11 /product="lipoprotein signal peptidase" /protein_id="NP_465369.1" /db_xref="GeneID:985858" /translation="MYYYLITLAVIALDQLTKWIVVQNMEIGQKIEVIPGFLYWTSYR NDGAAWSILEGHMWFFYLITVVVIGIIIYIMQKYAKGKRLFSISLAFILGGAIGNFID RVLHQEVVDFVQTVWGNYYFPIFNVADASLSVGVVLMLVYVFVDDRKTKGIK" misc_feature complement(1920448..1920900) /gene="lspA" /locus_tag="lmo1844" /note="Lipoprotein signal peptidase [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport]; Region: LspA; COG0597" /db_xref="CDD:440362" regulatory complement(1920443..1920448) /regulatory_class="ribosome_binding_site" /gene="lspA" /locus_tag="lmo1844" regulatory complement(1920909..1920914) /regulatory_class="ribosome_binding_site" regulatory complement(1920939..1920971) /regulatory_class="terminator" gene complement(1920982..1922265) /locus_tag="lmo1845" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985860" CDS complement(1920982..1922265) /locus_tag="lmo1845" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465370.1" /db_xref="GeneID:985860" /translation="MQKFFNKVFRLNEHKTNIRTEFLAGMIGFFTVAYIIVVNSSILA EAGVPYQGAVLATIFISAFGCLIMGFWANAPLILMPGMGINALFAYTLVQGMGLSWQV ALAAVTMSGLLFMILAFTPLAGKLNEAIPLILKQAITVGLGLFLIFLGLEKGGIVTRG KHAIIAVGDLGDPFVLATLVTLLLTMILVIRKIPGAFLWSLIIGTIVGVMFGVAGKAG GASISVAPWSDVLFKADFSGIASVGFWSAVFTMTMVIVFETVGLTNGQVRQLKQTEKL PRILKASSLTAFLSGLFGTSPTISALESGSMFASGAKTGLATITTGLFFIASLFLMPV LSFIPNSAIAPILIIIGMSMLQEFKEMDLSNAAETFSALLIIVLIPLTYSIADGIAAG FIAYPILRAFTKNEERTSPVMYVIAALFLLQFIIQ" misc_feature complement(1920988..1922265) /locus_tag="lmo1845" /note="Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 (NCS2) family [Nucleotide transport and metabolism]; Region: NCS2; COG2252" /db_xref="CDD:441853" regulatory complement(1922273..1922278) /regulatory_class="ribosome_binding_site" regulatory 1922426..1922431 /regulatory_class="ribosome_binding_site" gene 1922439..1923809 /locus_tag="lmo1846" /db_xref="GeneID:985857" CDS 1922439..1923809 /locus_tag="lmo1846" /experiment="EXISTENCE:[PMID:19448609]" /note="NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones" /codon_start=1 /transl_table=11 /product="multidrug transporter" /protein_id="NP_465371.1" /db_xref="GeneID:985857" /translation="MQQTVTYGAKWKQFLTIFTPIVITQLTLFSMTFFDTTMSGNYSN QALAGVAIGSSFWAPVNAAFSGLLMAITPIIAQLIGAKKEKQVKNTVHNGLYIALFLA FILILINFLVVPMILTHMPVTAEVADIARHFLNGICIGIPAFFISAILRSFIDSLGLT RVTMLITLCTVPFNIFLNYCFIFGNFGFPEMGGAGSGYATGITYWLVVLVSVILIQTQ TRLRKFGVFKGLTALRFSKIKEIIGIGVPNGLTILFETSIFSAVTILMGAFGTETIAA HQSANSVCTLLYAFPLSVASTLTILGGYETGAKRLKDAKQYRHIGMAAAILIGCVNGA ILFFFRDIIAGFYTNDPALSNLIMHFLVYAILFQFADAVLSPVLGALRGYKDVTVTSI VAFISYWLIGLPVGYGLSFTNLGPFGYWIGLSTGLFVAAFILSIRVRKTEQKLSFNTK DAEISN" misc_feature 1922439..1923776 /locus_tag="lmo1846" /note="multidrug efflux protein; Reviewed; Region: PRK01766" /db_xref="CDD:234981" misc_feature order(1923201..1923203,1923213..1923215,1923291..1923293, 1923300..1923302,1923537..1923539,1923549..1923551, 1923630..1923632,1923705..1923707,1923717..1923719) /locus_tag="lmo1846" /note="cation binding site [ion binding]; other site" /db_xref="CDD:240536" regulatory complement(1923789..1923819) /regulatory_class="terminator" gene complement(1923825..1924757) /locus_tag="lmo1847" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985848" CDS complement(1923825..1924757) /locus_tag="lmo1847" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="metal ABC transporter" /protein_id="NP_465372.1" /db_xref="GeneID:985848" /translation="MKKIIVVSLFALVVVLAGCSSQNSDSKKTDGKLNVVATYSILAD IVKNVGGNKIELHSIVPVGVDPHEYDPLPANIQSAADADLIFYNGLNLETGNGWFDRM LETADKSREDKNQVVELSKGVKPKYLTEKGKTSETDPHAWLDLHNGIIYTENVRDALV KADPDNADFYKENAKKYIDKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGL KAAYIWEINTESQGTPDQMKQIVGIVEKEKVPNLFVETSVDPRSMESVSKETGVPIFA KIFTDSTAKKGEVGDTYLEMMRYNLDKIHDGLAK" misc_feature complement(1923831..1924712) /locus_tag="lmo1847" /note="Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that...; Region: PsaA; cd01137" /db_xref="CDD:238557" misc_feature complement(order(1923915..1923917,1924140..1924142, 1924338..1924340,1924557..1924559)) /locus_tag="lmo1847" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238557" gene complement(1924754..1925596) /locus_tag="lmo1848" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985850" CDS complement(1924754..1925596) /locus_tag="lmo1848" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="metal ABC transporter permease" /protein_id="NP_465373.1" /db_xref="GeneID:985850" /translation="MLFLEGLMQYSFLQKALITSVTVGIVSGVIGSFIILRGMSLMGD AISHAVLPGVAISYMMGMNFFIGAATFGIAAALGIGFVNQKSRIKNDTAIGIVFSAFF ALGIILISFAKSSTDLYHILFGNVLAVRSSDMWMTIIIAIIVISLVALFYKEFLVSSF DPVMAEAYGLNVKFLHYFLMLLLTLVTVSALQTVGIILVVAMLITPAATAYLLTNKLS KMIVLASTFGAVSAIIGLYFSYIFNLASGAAMVLVATIIFFIAFLFAPKQGLLFSKKR EVIE" misc_feature complement(1924793..1925569) /locus_tag="lmo1848" /note="ABC-type Mn2+/Zn2+ transport system, permease component [Inorganic ion transport and metabolism]; Region: ZnuB; COG1108" /db_xref="CDD:440725" regulatory complement(1924765..1924770) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1848" gene complement(1925600..1926322) /locus_tag="lmo1849" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985851" CDS complement(1925600..1926322) /locus_tag="lmo1849" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="metal ABC transporter ATP-binding protein" /protein_id="NP_465374.1" /db_xref="GeneID:985851" /translation="MEIQGLTIAYKQKVAIDNVTLQIASGKLTGIVGPNGAGKSTLLK GMMGLIPREQGQVTLADKPLTYWRKKIAYVPQRSEVDLTFPITVFDMVLLGTYPALGL IKRPGKKEKQLALDALEQVEMTGFMKRQIGELSGGQLQRVFIARALAQHAEIFFLDEP FAGIDMTSEALIMRLLKKLRDNGKTIVVVHHDFHKVAAYFDDIILLNKKLVAHGPVEQ TFTEEKIQFAYGDAPVAFAAGV" misc_feature complement(1925633..1926319) /locus_tag="lmo1849" /note="ABC-type Mn2+/Zn2+ transport system, ATPase component [Inorganic ion transport and metabolism]; Region: ZnuC; COG1121" /db_xref="CDD:440738" regulatory complement(1925604..1925609) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1849" regulatory complement(1926329..1926334) /regulatory_class="ribosome_binding_site" regulatory complement(1926445..1926469) /regulatory_class="terminator" gene complement(1926482..1926898) /locus_tag="lmo1850" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985846" CDS complement(1926482..1926898) /locus_tag="lmo1850" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="NP_465375.1" /db_xref="GeneID:985846" /translation="METYLEIETLIKRIFNSFRHEVEAVLDKRLSGSEYRVLSLISSG LTKTSELAKTLDVSASHITAITDTLVEEELITRHRSEVDRRIIELKLTPNAEEFVKEI DKKKKEMIVKRFAVFSEYEQAEFRKLLKKLADGSIK" misc_feature complement(1926497..1926883) /locus_tag="lmo1850" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" regulatory complement(1926907..1926912) /regulatory_class="ribosome_binding_site" gene complement(1926935..1928425) /locus_tag="lmo1851" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985844" CDS complement(1926935..1928425) /locus_tag="lmo1851" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carboxy-terminal processing proteinase" /protein_id="NP_465376.1" /db_xref="GeneID:985844" /translation="MEESPQNEPNKVEKDEEQKSKPGNGYIKMKLFPFIMLLFAFVFV TALVTTIVMSLGDDKQVKVSIPERKEFTKLYDVYDEITSKYYKDTNSTTMIDGAISGM VNSLDDPYSTFMSKKESSEFNDTISASFEGIGAEIQEKDGAIVIVSPIKNSPAEKAGL RPQDIITQVDGKSVKGDTATEATQKIRGEKGTKVTLTIQRSNEDKPFDVTITRDEIPI ETVYKEMGSDKIAHVTISTFSETTYDELEKALKSLEKDGMKGLVLDLRGNPGGLLDQA VSISSLFVPDGKIVVQEQDKDGDKSAIKADSSSHGDYKVKVPTTMLIDGGSASASEIL AAAAKESGGIKLVGTKSFGKGTVQTATTLSDDSTLKLTVAKWLTPNSEWIHEKGITPD VVVNMPDYATMTIPSSTKVYKNGDFGDDVKTIETLLKALDYNVGKVDGLYDTDTEYAV QRFQTANKLDVTGIMTGVTTDKLVELTQKHLKETDPQLQKAKALVK" misc_feature complement(1927223..1928209) /locus_tag="lmo1851" /note="C-terminal processing protease CtpA/Prc, contains a PDZ domain [Posttranslational modification, protein turnover, chaperones]; Region: CtpA; COG0793" /db_xref="CDD:440556" misc_feature complement(1927001..1927207) /locus_tag="lmo1851" /note="Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis]; Region: PGRP; COG3409" /db_xref="CDD:442635" regulatory complement(1928435..1928440) /regulatory_class="ribosome_binding_site" regulatory complement(1928543..1928564) /regulatory_class="terminator" gene complement(1928579..1928785) /locus_tag="lmo1852" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985843" CDS complement(1928579..1928785) /locus_tag="lmo1852" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="mercury-binding protein" /protein_id="NP_465377.1" /db_xref="GeneID:985843" /translation="MEKLTLNVEGMTCSHCEARVTKALSEVNGVKSAVVSLDEGTATV EFEKGQVMEDALIDAVEEAGYEVA" misc_feature complement(1928582..1928785) /locus_tag="lmo1852" /note="Copper chaperone CopZ [Inorganic ion transport and metabolism]; Region: CopZ; COG2608" /db_xref="CDD:442020" regulatory complement(1928794..1928799) /regulatory_class="ribosome_binding_site" gene complement(1928798..1931011) /locus_tag="lmo1853" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985841" CDS complement(1928798..1931011) /locus_tag="lmo1853" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="heavy metal-transporting ATPase" /protein_id="NP_465378.1" /db_xref="GeneID:985841" /translation="MSDKYVRQDLNVFGMTCAACSTRIEKSLNKADGVEKANVNLVTE NAAVYYDPEVTSTEDLIKVVKHAGYDAAEKMSKEEKDAVLEKNFKKEVRRFILSALLS LPLLLTMVTHIPYIHEMAFAETIGNWINPTIQLVLATIVQFYIGWRFYDGAYKALRGK SANMDVLVALGTSAAYFYSVVEYVRHIIDPSVMPHYYFETSAVLITLILLGKLLESYA TSRTTESIAGLLELQAKEATVIREGKEWLVPVDSLKIGDVILVRPGEKVPMDAEIISG ETSIDEAMITGEPVPVEKKPGDSVIGATINFDGAFQAKITKRMEETVLESIIRLVEEA QGIKAPIQRLADRISGIFVPIVLGIAAVTFIIWYLVTGTVDGSLEAAIAVLVIACPCA LGLATPTAIMAGTGKGAESGILFKGGEHLERTSKVDTIVFDKTGTLTEGKLEVSDKKA ANDQFFPYLFLMEQQSEHPIAKAIIKMLEPENMDVSAIKQGKIRAKAGHGMTGNLDDS KVELGAYRYVSSLTTIPKEDDELIESWMHAGKTVVAMAIDGVYAGALALSDTPRPEAK EAIQKLKAQGIKTAICSGDQSVVVENMAKDLGIDMFFAEQLPNDKSALVEKLQQDGHI VAFVGDGINDAPALAASDIGISIGTGTDIAIETGDVTLVSHRLTLIPETIELSKATMR NIRQNFFWALAYNCAGIPIAALGLLAPWVAGLAMAFSSVSVVTNALRLKRYKFKS" misc_feature complement(1928810..1930993) /locus_tag="lmo1853" /note="Cation-transporting P-type ATPase [Inorganic ion transport and metabolism]; Region: ZntA; COG2217" /db_xref="CDD:441819" regulatory complement(1931021..1931026) /regulatory_class="ribosome_binding_site" gene complement(1931026..1931319) /locus_tag="lmo1854" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985840" CDS complement(1931026..1931319) /locus_tag="lmo1854" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465379.1" /db_xref="GeneID:985840" /translation="MKHDQPIVPRKEDETKLLQNRLRRIEGQIRGIAQMVEDDRYCTD ILVQISAANKALKNVGLQVLEHHTAHCVVDAAKNGEDDVMEDLLKAIRQFSKT" misc_feature complement(1931032..1931283) /locus_tag="lmo1854" /note="Transcriptional regulators CsoR (copper-sensitive operon repressor), RcnR, and FrmR, and related domains; this domain superfamily was previously known as DUF156; Region: CsoR-like_DUF156; cl00846" /db_xref="CDD:445134" misc_feature complement(order(1931044..1931073,1931077..1931082, 1931104..1931106,1931113..1931121,1931125..1931133, 1931137..1931142,1931149..1931154,1931161..1931166, 1931170..1931175,1931179..1931187,1931191..1931199, 1931203..1931214,1931221..1931226,1931230..1931235, 1931242..1931244,1931251..1931256,1931263..1931268, 1931275..1931277)) /locus_tag="lmo1854" /note="putative homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:197392" misc_feature complement(order(1931044..1931055,1931062..1931064, 1931119..1931121,1931131..1931133,1931140..1931142, 1931149..1931154,1931161..1931166,1931170..1931175, 1931179..1931187,1931191..1931199,1931203..1931214, 1931221..1931226,1931230..1931235,1931242..1931244, 1931251..1931256,1931263..1931268,1931275..1931277)) /locus_tag="lmo1854" /note="putative homodimer interface [polypeptide binding]; other site" /db_xref="CDD:197392" misc_feature complement(order(1931062..1931064,1931119..1931121, 1931197..1931199)) /locus_tag="lmo1854" /note="putative allosteric switch controlling residues; other site" /db_xref="CDD:197392" misc_feature complement(order(1931107..1931109,1931119..1931121, 1931194..1931196)) /locus_tag="lmo1854" /note="putative metal binding site [ion binding]; other site" /db_xref="CDD:197392" misc_feature complement(order(1931056..1931061,1931065..1931073, 1931077..1931082,1931104..1931109,1931113..1931118, 1931125..1931130,1931137..1931139)) /locus_tag="lmo1854" /note="putative homodimer-homodimer interface [polypeptide binding]; other site" /db_xref="CDD:197392" regulatory complement(1931327..1931332) /regulatory_class="ribosome_binding_site" regulatory complement(1931405..1931430) /regulatory_class="terminator" gene complement(1931442..1932266) /locus_tag="lmo1855" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985842" CDS complement(1931442..1932266) /locus_tag="lmo1855" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase" /protein_id="NP_465380.1" /db_xref="GeneID:985842" /translation="MSSLLTIALAVSISCVHTVEDQYFGGTNADSIAKVEQKSSGNQT LAELEKDPLYPYIDKQNKLTEKNGIKYIENEENMLVLANKDYSLQPTYTPPDLVRPNV TFSFGSQQVEKAQLRKEAATALEEMFVAANKDGKKLFAVSGYRSYKRQQEVFQAEVNA KGDQKAREAVAYPGTSEHQTGLAMDISSENQSYELTEAFGTTPEGKWLQENAHNYGFI LRYMKGREAITKYQYESWHYRYVGKDAATIIYENNWTLEEFFEHVKALQKKVDAAK" misc_feature complement(1931484..1932026) /locus_tag="lmo1855" /note="LD-carboxypeptidase LdcB, LAS superfamily [Cell wall/membrane/envelope biogenesis]; Region: LdcB; COG1876" /db_xref="CDD:441480" regulatory complement(1932277..1932282) /regulatory_class="ribosome_binding_site" gene complement(1932324..1933025) /gene="deoD" /locus_tag="lmo1856" /db_xref="GeneID:985839" CDS complement(1932324..1933025) /gene="deoD" /locus_tag="lmo1856" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate" /codon_start=1 /transl_table=11 /product="purine nucleoside phosphorylase" /protein_id="NP_465381.1" /db_xref="GeneID:985839" /translation="MSVHIEAKQGEIAETILLPGDPLRAKYIAETFLEDVVLFNQVRG MLGFTGTYKGEKVSVMGTGMGIPSISIYVNELIQSYDVKNLIRVGTMGGIQADVKVRD VVIAQAASTDSQINRNTFAGVDFAPVADFSLLKKAYDAGIEKGLSLKVGNVFSADRFY NDQLDKQQLADYGVLGIEMEAAALYTLAQKYGRRALAILTVSDHIFTGEETSAEERQT TFNDMIVVALEAAIK" misc_feature complement(1932327..1933025) /gene="deoD" /locus_tag="lmo1856" /note="DeoD-type purine-nucleoside phosphorylase; Region: deoD; PRK05819" /db_xref="CDD:180275" misc_feature complement(order(1932450..1932452,1932456..1932461, 1932468..1932470,1932489..1932491,1932504..1932506, 1932510..1932524,1932546..1932557,1932564..1932566, 1932570..1932578,1932609..1932614,1932621..1932626, 1932630..1932635,1932639..1932662,1932669..1932707, 1932801..1932806,1932810..1932815,1932822..1932827, 1932831..1932836,1932894..1932899,1932903..1932905, 1932957..1932968,1933014..1933016)) /gene="deoD" /locus_tag="lmo1856" /note="homohexamer interface [polypeptide binding]; other site" /db_xref="CDD:350157" misc_feature complement(order(1932411..1932413,1932417..1932422, 1932486..1932497,1932549..1932551,1932750..1932767, 1932834..1932836,1932954..1932956,1932963..1932971)) /gene="deoD" /locus_tag="lmo1856" /note="active site" /db_xref="CDD:350157" misc_feature complement(order(1932486..1932488,1932756..1932767, 1932897..1932899,1932954..1932956,1932963..1932971)) /gene="deoD" /locus_tag="lmo1856" /note="phosphate binding site [ion binding]; other site" /db_xref="CDD:350157" misc_feature complement(order(1932411..1932413,1932417..1932422, 1932486..1932497,1932549..1932551,1932750..1932758, 1932765..1932767,1932834..1932836)) /gene="deoD" /locus_tag="lmo1856" /note="purine nucleoside binding site [chemical binding]; other site" /db_xref="CDD:350157" regulatory complement(1933033..1933038) /regulatory_class="ribosome_binding_site" gene complement(1933037..1933270) /locus_tag="lmo1857" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985942" CDS complement(1933037..1933270) /locus_tag="lmo1857" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465382.1" /db_xref="GeneID:985942" /translation="MGRSFYHFLMTYRDPKLTDQKTEFANNAYRDHSFPKQTRNYHIL CDYLEFNAPYLPGMSIFDELWDAYLLDEEKNKH" misc_feature complement(1933064..1933270) /locus_tag="lmo1857" /note="hypothetical protein; Provisional; Region: PRK13672" /db_xref="CDD:184229" regulatory complement(1933281..1933286) /regulatory_class="ribosome_binding_site" gene complement(1933333..1934238) /locus_tag="lmo1858" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985865" CDS complement(1933333..1934238) /locus_tag="lmo1858" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dehydrogenase" /protein_id="NP_465383.1" /db_xref="GeneID:985865" /translation="MLKIAVVGLGGIAQKAYLPVFAEMENIEVHLYTRDAQKLKHLSE KYRFDHYHQSIHSMIESGVNAAFVHSSTASHPEVIRTFLANHIPVYVDKPIADNLAEV EELTRLAEEQNTLLMTGFNRRYAPKYQELKALTDTNMIIMQKNRAAQPGEARTFIYDD FIHVIDTVRFLLDAKIEQLHVVPVWQENLLASITVQITAGGKVATAIMNRDSGVNEER LAVMTPSAKYEVENVTETHIYEGTTERFERFGDWETTLYKRGFVSIIQAFLTAVRNGE KAPISKEDALETHRLAEEILRKIEN" misc_feature complement(1933339..1934238) /locus_tag="lmo1858" /note="Predicted dehydrogenase [General function prediction only]; Region: MviM; COG0673" /db_xref="CDD:440437" regulatory complement(1934246..1934251) /regulatory_class="ribosome_binding_site" gene complement(1934321..1934758) /locus_tag="lmo1859" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985834" CDS complement(1934321..1934758) /locus_tag="lmo1859" /EC_number="1.8.4.11" /experiment="EXISTENCE:[PMID:19448609]" /note="this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress" /codon_start=1 /transl_table=11 /product="methionine sulfoxide reductase B" /protein_id="NP_465384.1" /db_xref="GeneID:985834" /translation="MDESKKNERLQQLTDIQYNVTQKAGTERPFQNEFYDNEVKGIYV DIVSGKPLFSSNDQYDAGCGWPSFTKPIDEAEVIEHRDLTHGMIRTEVKSADADSHLG HVFPDGPQDKGGLRYCINSAALRFIPVDKLEEEGYQAYKKIFE" misc_feature complement(1934366..1934737) /locus_tag="lmo1859" /note="Peptide methionine sulfoxide reductase MsrB [Posttranslational modification, protein turnover, chaperones]; Region: MsrB; COG0229" /db_xref="CDD:439999" gene complement(1934765..1935298) /locus_tag="lmo1860" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985835" CDS complement(1934765..1935298) /locus_tag="lmo1860" /EC_number="1.8.4.11" /experiment="EXISTENCE:[PMID:19448609]" /note="this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress" /codon_start=1 /transl_table=11 /product="methionine sulfoxide reductase A" /protein_id="NP_465385.1" /db_xref="GeneID:985835" /translation="MTKESLEKATFAGGCFWCMVKPFDTQPGIEKVVSGYTGGHTVNP TYKEVCSGTTGHTEAIQITFDPAVFPYEKLVEVYWQQTDPTDAAGQFVDRGDSYRPVI FYHNEEQKEIAEKSKAALDASGRFKKPIVTEIAKAETFYPAEEYHQDFYKKEKAHYEG YQVASGRAAFIDANWKG" misc_feature complement(1934771..1935289) /locus_tag="lmo1860" /note="Peptide methionine sulfoxide reductase MsrA [Posttranslational modification, protein turnover, chaperones]; Region: MsrA; COG0225" /db_xref="CDD:439995" regulatory complement(1934766..1934771) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1860" regulatory complement(1935306..1935311) /regulatory_class="ribosome_binding_site" gene complement(1935334..1935948) /locus_tag="lmo1861" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985831" CDS complement(1935334..1935948) /locus_tag="lmo1861" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465386.1" /db_xref="GeneID:985831" /translation="MQRETRSAPKKPKRNYWKWVCITLISVLLISAGWIYVAVFKLSP QDEPTPSLISNKSMVEFQTSTTKADLNQLISSYIEDFSKDQDIGYKVFVANNVNFTAE AEIFGEPVELRLKFSPEVVDNGNVELTLKDMSVGALPLPVSYVMNYVSKNYKFPDWVT IMPKKEKIYLSLDKLKLQGDTKVRADTLNLKKDDISFTLLVPVK" misc_feature complement(1935346..1935903) /locus_tag="lmo1861" /note="Uncharacterized protein conserved in bacteria (DUF2140); Region: DUF2140; pfam09911" /db_xref="CDD:430920" regulatory complement(1935956..1935961) /regulatory_class="ribosome_binding_site" gene complement(1935964..1936749) /locus_tag="lmo1862" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985832" CDS complement(1935964..1936749) /locus_tag="lmo1862" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465387.1" /db_xref="GeneID:985832" /translation="MTKKKWLWLTGSVLVIALLVGAVFGIKYYKESKEIPINLVAMGD SLTEGVGDENKDGGYVGIIPKKLEEEPNVPSVKTSNYGVSGNKITQLEKRLKTNKDFQ EDVKNANVITITIGGNDVMAILQSRLLNVNVDDFTKANKEFQQELETLLKDIRSYNKD AAIFLMGIYNPYTTYFSDIKQFDEIISDWNKASKKTIQQDSNAYFVPIAKVLEDRNAD NKDKPNSLLSDDYFHPNHKGYEKMTSELDKAIVKQLNEGNIPK" misc_feature complement(1936003..1936638) /locus_tag="lmo1862" /note="Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely...; Region: SGNH_hydrolase_YpmR_like; cd04506" /db_xref="CDD:239947" misc_feature complement(order(1936051..1936053,1936060..1936062, 1936396..1936398,1936495..1936497,1936615..1936617)) /locus_tag="lmo1862" /note="active site" /db_xref="CDD:239947" misc_feature complement(order(1936051..1936053,1936060..1936062, 1936615..1936617)) /locus_tag="lmo1862" /note="catalytic triad [active]" /db_xref="CDD:239947" misc_feature complement(order(1936396..1936398,1936495..1936497, 1936615..1936617)) /locus_tag="lmo1862" /note="oxyanion hole [active]" /db_xref="CDD:239947" gene complement(1936764..1937603) /locus_tag="lmo1863" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985833" CDS complement(1936764..1937603) /locus_tag="lmo1863" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465388.1" /db_xref="GeneID:985833" /translation="MRKIKIITDSTAGLTLEEAAKWNIDVLYLTVEIDGKVYNPKTDI TPEEFMVRMAETKELPKSSQPAIGSFVEAYEKYTAEGYEILSIHLTEKLSGTVNAARQ AADMVEGNITVVDCDYTARGQAFQVLKAAEMAQSGDYSVEEIHAKINDIRDKTKLYIV VVTLDNLIKGGRVGRMQGFLGSLLNIKLIAKLTDGQLEEETKVRSNKKVLQYCLNLIK DEPKKIQHLDVVHANGLNLADDFIAESKEITGLTEIPLFFADPVISTHAGTGAFAFMY YTD" misc_feature complement(1936776..1937594) /locus_tag="lmo1863" /note="EDD domain protein, DegV family; Region: DegV; TIGR00762" /db_xref="CDD:273257" regulatory complement(1937611..1937616) /regulatory_class="ribosome_binding_site" gene 1937783..1938415 /locus_tag="lmo1864" /db_xref="GeneID:985830" CDS 1937783..1938415 /locus_tag="lmo1864" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hemolysin" /protein_id="NP_465389.1" /db_xref="GeneID:985830" /translation="MNVTSYNWKEEVANAITHGIGFILSIPALVLLIIFAAGKDNPLY LTSFLIYGISLMLLYICSTLLHSFKPCKARTIFNIMDHAAIYVLIAGSYTPFVLITIQ GTLGWTLFGVIWGLAIAGIIYKIFMTGKLKLLSTSVYLLMGWMVMFAIKPLYAGLTPT GFWLLATGGIMFTVGAVFYSIPRVPYMHAIWHLFVIAGTAFMYFCILFYV" misc_feature 1937792..1938412 /locus_tag="lmo1864" /note="Predicted membrane channel-forming protein YqfA, hemolysin III family [Intracellular trafficking, secretion, and vesicular transport]; Region: YqfA; COG1272" /db_xref="CDD:440883" regulatory 1938435..1938452 /regulatory_class="terminator" gene 1938538..1939155 /locus_tag="lmo1865" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985828" CDS 1938538..1939155 /locus_tag="lmo1865" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465390.1" /db_xref="GeneID:985828" /translation="MIPIELSPRQHQIVAYVRANEPATGDSIAAHLKLTRATIRADLS ILTMTGILDARPKVGYFYSGLETNPIHFDEIRQLKVADIMTQPFFAKKETSVYDAIVM LFMEDIGSLYVINEELLVGLVSRKDLLKGALADADTKATPIATIMTRMPNLVTVTKND TVLHAAEQLVFHQIDSLPVLENAKVVGKISKTRITALFVDTIKKV" misc_feature 1938538..>1938756 /locus_tag="lmo1865" /note="DNA-binding transcriptional repressor; Region: srlR; PRK10434" /db_xref="CDD:182457" misc_feature 1938781..1939137 /locus_tag="lmo1865" /note="Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains of CcpN repressor; Region: CBS_pair_CcpN; cd04617" /db_xref="CDD:341387" misc_feature order(1938787..1938789,1938793..1938801,1938865..1938873, 1939063..1939065,1939099..1939101,1939105..1939107, 1939111..1939116,1939123..1939125) /locus_tag="lmo1865" /note="putative ligand binding site II [chemical binding]; other site" /db_xref="CDD:341387" misc_feature 1938787..1938978 /locus_tag="lmo1865" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341387" misc_feature order(1938865..1938867,1938901..1938903,1938913..1938918, 1938925..1938927,1938997..1938999,1939063..1939071, 1939111..1939113) /locus_tag="lmo1865" /note="putative ligand binding site I [chemical binding]; other site" /db_xref="CDD:341387" misc_feature 1938997..1939125 /locus_tag="lmo1865" /note="CBS repeat [structural motif]; Region: CBS repeat" /db_xref="CDD:341387" regulatory 1939157..1939162 /regulatory_class="ribosome_binding_site" gene 1939168..1939980 /locus_tag="lmo1866" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985829" CDS 1939168..1939980 /locus_tag="lmo1866" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465391.1" /db_xref="GeneID:985829" /translation="MENPVIIYVISDAIGETAQHIIRAVTAQFSLNKPADIRRHAFIR DESALLETLEEAKATDGIVVQTLVQAKLAEYATNFCVQNNIPNVDLLHTLTAAVEAKT GLKSKQDPGNMRRLDSNYFDRIAAIEFAVKYDDCKDPRGLLDADIVLVGVSRTSKTPL SSFLANQNWKVANVPLVPEIPIPAELFQIPAERIIGLTTTPEKLAQIRKVRLRSIGLD EASSYSSEKRILEELEYGYDTFKKLGCQVIHVEDKAIEETAALITEIITSYH" misc_feature 1939186..1939953 /locus_tag="lmo1866" /note="Kinase/pyrophosphorylase; Region: Kinase-PPPase; pfam03618" /db_xref="CDD:460990" regulatory 1939985..1939990 /regulatory_class="ribosome_binding_site" gene 1939999..1942638 /locus_tag="lmo1867" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985826" CDS 1939999..1942638 /locus_tag="lmo1867" /EC_number="2.7.9.1" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of phosphoenolpyruvate from pyruvate" /codon_start=1 /transl_table=11 /product="pyruvate phosphate dikinase" /protein_id="NP_465392.1" /db_xref="GeneID:985826" /translation="MRKFVYQFSEGSKEMKNLLGGKGANLAEMTNIGLPVPPGFIIST DACNDYTANNKHLSEAIFDEVKIHLAELEKQTGKIFGFAENPLLVSVRSGAPFSMPGM MDTVLNLGLNDQAAEGLANLTGDARSAYDSYRRFIQMFGDVVFEIPSYHFEQALSRIK KANDYRLDTELTATDLSELIDAYKLIFSQATGTDFPQDPLEQLRLAIIAVFDSWMNPR AVIYRRLHDIDASFGTAVNIQAMVFGNTGETSGTGITFTRNPSTGEKKVFGEFLLNAQ GEDVVAGIRTPEPISALEERMPTVYKELLHTCELLENHYLDMQDIEFTIEKGKLYVLQ TRSGKRTAKAAIQTAVDFVQEGKITRQEAIMRVETKQLHQLLHPTFDESALKNGQVIA TGLPASPGAATGQIFFAAKEAVQATERGIPVILVRNETSPEDIEGMARSNAILTAHGG MTSHAAVVARGMGKCCIAGCAELTINEKEKTIILPTGDTLHEGDALSLDGSSGKVYLG EIALREAQIGGHFDELMAWADTEKRLMIRVNADTPPDFKKALLFGAEGIGLCRTEHMF FDEKRIHYVRQMILAESLSERESVLTTLKEMQKADFSELFRIADGRAVNIRLLDPPLH EFLPKTKQEIEQLASAMNRTVPQITKRINELSEANPMLGHRGCRLAITFPEIYRMQTE AIIESAVTLHDEGIDVHPEIMIPLIATKSELSYIKKEMKHAIHTIFDRERVMLPYDIG TMIEIPRACVTADEIAEEAEFFSFGTNDLTQLTYGFSRDDATKFLADYYEKDILSKDP FVSIDKNGVGALVEMAVTRGRMTSEHLKMGVCGEHGGDPESIQFFHQLGLTYVSCSPY RVPIARLAAAQAALAEKHLIPTI" misc_feature 1940002..1942578 /locus_tag="lmo1867" /note="pyruvate, phosphate dikinase; Region: pyru_phos_dikin; TIGR01828" /db_xref="CDD:273822" regulatory 1942643..1942675 /regulatory_class="terminator" regulatory complement(1942643..1942675) /regulatory_class="terminator" gene complement(1942687..1943064) /locus_tag="lmo1868" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986136" CDS complement(1942687..1943064) /locus_tag="lmo1868" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465393.1" /db_xref="GeneID:986136" /translation="MIEKIGQVMLYVENQAAVRDFWVEKLDFVVVSEEVVNGEIQWIE IAPTKGVETTFVLQNKKKVAEMNPEMNLGTPSILLFGSNVAELYEEYKNKGITVGDLV DLPMGRVFNFSDNEGNYFAICEK" misc_feature complement(1942693..1943046) /locus_tag="lmo1868" /note="uncharacterized subfamily of vicinal oxygen chelate (VOC) family; Region: VOC_like; cd07263" /db_xref="CDD:319924" gene complement(1943068..1944051) /locus_tag="lmo1869" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985825" CDS complement(1943068..1944051) /locus_tag="lmo1869" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465394.1" /db_xref="GeneID:985825" /translation="MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTK KGSLQLAIQRVYSTVLALSIAAVFFMLIGYNAVSFGLYLLIFIPLAVRLHVADGIVVS SVLVSHILLEQSLSFFWFKNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMR QILTEMTQGLRNQSEYHDEFGLLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDM RLVQYRILTQMKRHLVAFDHSSEQSMALAEITEKTAQTLDEHNTAEDLVAEITKMVHE FRSSKLPETRAEFENRAILFQFMNDLRYLLEMKRDFYAEFGLKEKEMTRGR" misc_feature complement(1943629..1944051) /locus_tag="lmo1869" /note="Aromatic acid exporter family member 1; Region: ArAE_1; pfam06081" /db_xref="CDD:428756" misc_feature complement(1943131..1943613) /locus_tag="lmo1869" /note="Putative aromatic acid exporter C-terminal domain; Region: ArAE_1_C; pfam11728" /db_xref="CDD:432028" regulatory complement(1943072..1943077) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1869" regulatory complement(1944058..1944063) /regulatory_class="ribosome_binding_site" regulatory complement(1944116..1944137) /regulatory_class="terminator" gene complement(1944145..1944768) /locus_tag="lmo1870" /db_xref="GeneID:985824" CDS complement(1944145..1944768) /locus_tag="lmo1870" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alkaline phosphatase" /protein_id="NP_465395.1" /db_xref="GeneID:985824" /translation="METWITSIMADFGYIGIFVLIMVENLFPPIPSEIILTFGGFMTT VTSLNVVMVIIVATLGSVVGAILLYKVASYFGKERLTKIVLKYGRILRLKESDIERAE NFFLKYGSWAVFLCRMIPLIRSLISIPAGMTKMKMSKFLILTTAGSLLWNTVLIGLGA MLGESWSEIVVFMDSFSTIIYSIIAILVVVGLGFFFRARFKKTLDEE" misc_feature complement(1944163..1944768) /locus_tag="lmo1870" /note="Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family [Cell wall/membrane/envelope biogenesis]; Region: DedA; COG0586" /db_xref="CDD:440351" regulatory complement(1944776..1944781) /regulatory_class="ribosome_binding_site" regulatory complement(1944871..1944899) /regulatory_class="terminator" gene complement(1944908..1946419) /locus_tag="lmo1871" /db_xref="GeneID:985905" CDS complement(1944908..1946419) /locus_tag="lmo1871" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoglucomutase" /protein_id="NP_465396.1" /db_xref="GeneID:985905" /translation="MNQSETKALEALQNGSDIRGIAIATEKYQITLTDERVEKIAYGF AKWLKEEKKVEGQAKVAIGHDSRLSAERLKAALVKGLTFAGIDVVDVGLATTPAMFMA TQYEDYDCDAGIMITASHLPFMYNGLKLFTKSGGAEHEDIDYIVAHADKSFIENGLNL GKVTKQDLLSTYAADLTDKIRAGITDAADKMKPLQGSHIIVDAGNGAGGFFAEKVLAE LGADISESQFLDPDGNFPNHIPNPDNEEAMASLKKAVLASGADLGVIFDTDVDRAAIM DKNGESLNRNPLIAVISSIILEEKPGTTIVTDSTTSGHLQAFIEAKGGKQHRFKRGYR NVINEALRLNANGTPSEIAIEVSGHAALKENYFLDDGAYLIAKILMTYATLRKNGQDL PDLIADLKEPAESEEIRLSITANDFKAYGKEALADFLTFVEADPDMELEPVNQEGIRV NTKGALGEGWFLLRMSLHEPVMPMNLESDEAGGIRKVKDRLAGFFATKADLKM" misc_feature complement(1944917..1946410) /locus_tag="lmo1871" /note="The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this family include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine...; Region: phosphohexomutase; cl38939" /db_xref="CDD:476822" misc_feature complement(order(1945016..1945024,1945028..1945030, 1945343..1945345,1945349..1945351,1945355..1945357, 1945421..1945429,1945490..1945492,1945604..1945609, 1945613..1945615,1945619..1945621,1946033..1946035, 1946057..1946065,1946363..1946365,1946372..1946374, 1946378..1946380)) /locus_tag="lmo1871" /note="active site" /db_xref="CDD:100091" misc_feature complement(order(1945016..1945024,1945028..1945030, 1945343..1945345,1945349..1945351,1945355..1945357, 1945421..1945423,1945427..1945429,1945490..1945492, 1945604..1945606,1946063..1946065,1946363..1946365, 1946372..1946374)) /locus_tag="lmo1871" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100091" misc_feature complement(order(1945607..1945609,1945613..1945615, 1945619..1945621,1946063..1946065)) /locus_tag="lmo1871" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:100091" regulatory complement(1946426..1946431) /regulatory_class="ribosome_binding_site" gene complement(1946488..1947363) /locus_tag="lmo1872" /db_xref="GeneID:985820" CDS complement(1946488..1947363) /locus_tag="lmo1872" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="methyltransferase" /protein_id="NP_465397.1" /db_xref="GeneID:985820" /translation="MLSKMEINKRALKENMALLACPICGAAFEFREPQSFVCLEGHGF DIAKPGYVHLLKQAHKTKYDQALFESRKKVIASGFFEKLIERVTEIITEKKKEQLVLY DAGCGEGSHLARVVSNLQATGVNVKAVGLDIAKEGVKQAARDYPGTSWTVADLANCPN QAETADVILNILSPSNYVEFKRLLKKDGFLLKVVPEANYLRELREFIYVDEKSSYSNE SVTSRLAEKLSVEHVERVTYKAPIAKELFADFLEMTPLGWHIEADKKNELLENPPEEL TVDLQIIIANRAHLL" misc_feature complement(1946518..1947303) /locus_tag="lmo1872" /note="S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases; cl17173" /db_xref="CDD:473071" regulatory complement(1947373..1947378) /regulatory_class="ribosome_binding_site" regulatory complement(1947388..1947409) /regulatory_class="terminator" gene complement(1947416..1947898) /locus_tag="lmo1873" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985819" CDS complement(1947416..1947898) /locus_tag="lmo1873" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dihydrofolate reductase" /protein_id="NP_465398.1" /db_xref="GeneID:985819" /translation="MIIFVWAQDRAGNIGKDNKMPWHLPGDLQFFKKTTTGKTLVMGR KTYESLGKALPNRKTIVLTRDQGLKLDDAEILHSKEAVLALAETGEPIYIVGGAEIYR LFMDVADQLIVTKIDAEFEADTAFPEVDWENFSEVAKEFHEKDEKNKYNYTFYTYERN " misc_feature complement(1947422..1947898) /locus_tag="lmo1873" /note="Dihydrofolate reductase; Region: DHFR_1; pfam00186" /db_xref="CDD:425512" misc_feature complement(order(1947557..1947559,1947596..1947598, 1947614..1947616,1947728..1947730,1947818..1947820, 1947833..1947835,1947884..1947886)) /locus_tag="lmo1873" /note="folate binding site [chemical binding]; other site" /db_xref="CDD:238127" misc_feature complement(order(1947602..1947613,1947707..1947709, 1947761..1947769,1947857..1947859,1947878..1947880)) /locus_tag="lmo1873" /note="NADP+ binding site [chemical binding]; other site" /db_xref="CDD:238127" regulatory complement(1947908..1947913) /regulatory_class="ribosome_binding_site" gene complement(1947914..1948858) /gene="thyA" /locus_tag="lmo1874" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985817" CDS complement(1947914..1948858) /gene="thyA" /locus_tag="lmo1874" /EC_number="2.1.1.45" /experiment="EXISTENCE:[PMID:19448609]" /note="ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived" /codon_start=1 /transl_table=11 /product="thymidylate synthase" /protein_id="NP_465399.1" /db_xref="GeneID:985817" /translation="MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPI MTTKRVPFKLVVSELLWFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDF GLRAERDPAFKEVYQAEMEKFKTRIIEDEAFATKYGELGNIYGKQWREWKTSQGETID QLADLIEMIKTNPNSRRLIVSAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSA DIFLGVPFNIASYALLTHLIAREVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHA LPKLVLSDKPATIFDFEVADISLDGYNPDPSIKAPISV" misc_feature complement(1947917..1948852) /gene="thyA" /locus_tag="lmo1874" /note="thymidylate synthase; Region: thym_sym; TIGR03284" /db_xref="CDD:213790" misc_feature complement(order(1948094..1948099,1948208..1948213, 1948217..1948219,1948244..1948246,1948256..1948258, 1948262..1948264,1948304..1948309,1948328..1948333, 1948769..1948771,1948775..1948777,1948799..1948801, 1948811..1948813)) /gene="thyA" /locus_tag="lmo1874" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:238211" misc_feature complement(order(1948082..1948084,1948088..1948090, 1948178..1948183,1948202..1948204,1948208..1948216, 1948268..1948273,1948427..1948429,1948610..1948612, 1948619..1948621,1948685..1948687,1948796..1948798)) /gene="thyA" /locus_tag="lmo1874" /note="active site" /db_xref="CDD:238211" regulatory complement(1948866..1948871) /regulatory_class="ribosome_binding_site" gene complement(1948871..1950763) /locus_tag="lmo1875" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985821" CDS complement(1948871..1950763) /locus_tag="lmo1875" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465400.1" /db_xref="GeneID:985821" /translation="MKQLKVENLTKTYGEKSLFENISLTITEGERIGLIGVNGTGKST LLQIISGSESGDKGTVTKAKDYTIGYLAQDPAFNEEDTVLAAVFDGDTAALRAMRKYE EVLLAMSLDAENTKLHDAYTAASQEMDASAAWDMNTEAKTILERLGITDLTAKISALS GGQRKRVGLAQVLIETPDLLILDEPTNHLDFQSIRWLEEYLNRFKGAVLLVTHDRYFL DRVTNHMVELDRGSAYRYVGNYEKFMESKAIRMENEVRESEKNKNLYRKELAWMRRGP QGRATKQNARQDRFHDLEKKVKIKTDDSELAIDFVTSRLGKDVFELKNLEKRFDEKQV LQDFSLIIQPGERLGITGNNGTGKSTLLNMLAGKLAPDAGEVVTGQTVQIGYYTQQNE EMDPDMRMIAYLQEAGEQVTTSGGEVISVSAMLERFLFPPNSHGKKIGSLSGGEKRRL FLLRILMERPNVLLLDEPTNDLDTQTLTVLEDYLESFNGTVITVSHDRYFLDKVVNKL LVFRAIGEVEIFYGEYSDYLKELEAKGKPAKSMKKMANTSVEKSSPEKKEKVKLTYQE QLEWDGIEDAISKLEKDIESLNETLEQTGADFTKAAEISGFITAKETELEQMMERWEF LSQYAE" misc_feature complement(1949177..1950748) /locus_tag="lmo1875" /note="ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]; Region: Uup; COG0488" /db_xref="CDD:440254" misc_feature complement(1948886..1949083) /locus_tag="lmo1875" /note="ABC transporter C-terminal domain; Region: ABC_tran_CTD; pfam16326" /db_xref="CDD:465095" regulatory complement(1950771..1950776) /regulatory_class="ribosome_binding_site" regulatory complement(1950844..1950874) /regulatory_class="terminator" gene complement(1950883..1951323) /locus_tag="lmo01876" /pseudo /db_xref="GeneID:3167621" misc_feature complement(1950883..1951323) /locus_tag="lmo01876" /note="formyl-tetrahydrofolate synthetase C-terminal" /pseudo gene complement(1951284..1952564) /locus_tag="lmo1877" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985815" CDS complement(1951284..1952564) /locus_tag="lmo1877" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="formyl-tetrahydrofolate synthetase" /protein_id="NP_465401.1" /db_xref="GeneID:985815" /translation="MSNKVKSDIEIASKAEILPVTTIAEHLGLDADALELYGKYKAKL SYDTIHSLKDKEPGKLVLVTAINPTPAGEGKSTVTVGLGDALSKKDKKTVIALREPSL GPTMGIKGGATGGGYAQVIPMEDINLHFTGDFHAITAANNALSAFIDNHMQQGNDLEI DGRRIVWKRVVDLNDRALRKVVVGLGGPIQGVPREDGFDITVASEIMAIICLASDLKD LKKRLSEIVIGYNYKKEPITVGEMGYEGALTLLLKDALKPNLVQTLEHTPAIVHGGPF ANIAHGCNSVSATSTALRLGDYVVTEAGFGADLGAEKFLDIKVPALGKAPDCVVIVAT IRALKMHGGALKTELSEENVDALAKGFTNLQKHTESIQTFGIPYVVAINKFITDSDAE VAKLEALCEEHGIPFSLTEVWEKVAMAAWNSRIK" misc_feature complement(<1951320..1952552) /locus_tag="lmo1877" /note="Formyltetrahydrofolate synthetase [Nucleotide transport and metabolism]; Region: MIS1; COG2759" /db_xref="CDD:442046" regulatory complement(1952572..1952577) /regulatory_class="ribosome_binding_site" gene complement(1952721..1953149) /locus_tag="lmo1878" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985816" CDS complement(1952721..1953149) /locus_tag="lmo1878" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in manganese homeostasis; activates the transcription of the mntABCD operon" /codon_start=1 /transl_table=11 /product="manganese transport transcriptional regulator" /protein_id="NP_465402.1" /db_xref="GeneID:985816" /translation="MPTPSMEDYIEKIYSLIETKGYARVSDIADELFVHPSSVTKMVQ KLDKDEYLIYEKYRGLILTPKGTQMGKRLLERHALLESFLSIIGVDPSHIYHDVEGIE HHLSWNSIDRIGDVVQFFENHPDALKTLKAMETTKPETKE" misc_feature complement(1952724..1953149) /locus_tag="lmo1878" /note="transcriptional regulator MntR; Region: PRK03902" /db_xref="CDD:179669" regulatory complement(1953158..1953163) /regulatory_class="ribosome_binding_site" regulatory 1953497..1953502 /regulatory_class="ribosome_binding_site" gene 1953513..1953713 /gene="cspD" /locus_tag="lmo1879" /db_xref="GeneID:985814" CDS 1953513..1953713 /gene="cspD" /locus_tag="lmo1879" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cold-shock protein" /protein_id="NP_465403.1" /db_xref="GeneID:985814" /translation="MQNGKVKWFNNEKGYGFIESDGGEDIFVHFTAIQGDGYKSLEEG QAVTFEVVEGNRGAQAANVEKA" misc_feature 1953513..1953710 /gene="cspD" /locus_tag="lmo1879" /note="Cold shock protein, CspA family [Transcription]; Region: CspC; COG1278" /db_xref="CDD:440889" regulatory 1953745..1953761 /regulatory_class="terminator" regulatory 1953822..1953827 /regulatory_class="ribosome_binding_site" gene 1953836..1954237 /locus_tag="lmo1880" /db_xref="GeneID:985813" CDS 1953836..1954237 /locus_tag="lmo1880" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="RNase HI" /protein_id="NP_465404.1" /db_xref="GeneID:985813" /translation="MEVFVDGASAGNPGPSGAGIVLKADGIYEQFAIPLAVMTNHEAE FIAIKLGLEEALKKQATLIRLYSDSKVAIEAIHKRHAKNPLFKPHLDAILEMADSLEL FFAEWRNVSQNKQADQLARQAIKKQKQPGVK" misc_feature 1953839..1954210 /locus_tag="lmo1880" /note="RNAse HI family that includes archaeal, some bacterial as well as plant RNase HI; Region: RNase_HI_like; cd09279" /db_xref="CDD:260011" misc_feature order(1953851..1953862,1953950..1953958,1953965..1953967, 1954037..1954039,1954154..1954156,1954196..1954198) /locus_tag="lmo1880" /note="RNA/DNA hybrid binding site [nucleotide binding]; other site" /db_xref="CDD:260011" regulatory complement(1954215..1954250) /regulatory_class="terminator" gene complement(1954255..1955127) /locus_tag="lmo1881" /db_xref="GeneID:985812" CDS complement(1954255..1955127) /locus_tag="lmo1881" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="5'-3' exonuclease" /protein_id="NP_465405.1" /db_xref="GeneID:985812" /translation="MTENRENLLVVDGMALLFRAFYATAVSKQFMFNQQGIPTNGVQG FMRHMFAAIRQSNPTHTLICWDMGSQTFRNELYDGYKAGRTAPPEEMIPQFDLAKEVA AGFGFVNLGVPGFEADDCIGTITVQASNTIATTVLSGDKDLLQLIAPTNDVWIMQKGY GNYKRYDEATFFEEMGISPRQFIDVKALMGDTSDGYPGVRGIGEKTAIKLIQEYESIE GVLNNLDKLKPAQQTKIQEDLAMLELSQKLARIHTEVPLEIDLPSLKYDGFREDAFAV VEKYGLKTLTRDIE" misc_feature complement(1954261..1955127) /locus_tag="lmo1881" /note="5'-3' exonuclease Xni/ExoIX (flap endonuclease) [Replication, recombination and repair]; Region: ExoIX; COG0258" /db_xref="CDD:440028" regulatory complement(1955135..1955140) /regulatory_class="ribosome_binding_site" gene complement(1955205..1955474) /gene="rpsN" /locus_tag="lmo1882" /db_xref="GeneID:985810" CDS complement(1955205..1955474) /gene="rpsN" /locus_tag="lmo1882" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S14" /protein_id="NP_465406.1" /db_xref="GeneID:985810" /translation="MAKKSKVAKHERQQALVEQYAELRRTLKAEGRYDELRKLPRDSS PSRLHNRCELTGRPHGYMRKFGMSRIRFRELAHQGQLPGVKKASW" misc_feature complement(1955208..1955474) /gene="rpsN" /locus_tag="lmo1882" /note="30S ribosomal protein S14; Reviewed; Region: rpsN; PRK08881" /db_xref="CDD:181574" regulatory complement(1955483..1955488) /regulatory_class="ribosome_binding_site" regulatory complement(1955562..1955589) /regulatory_class="terminator" gene complement(1955598..1956656) /locus_tag="lmo1883" /db_xref="GeneID:986008" CDS complement(1955598..1956656) /locus_tag="lmo1883" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="chitinase" /protein_id="NP_465407.1" /db_xref="GeneID:986008" /translation="MNGKQVMVGGLSLLLVGAGLGAFGSTAQAATDDASVMPDISNKQ VLVGYWHSWKSSGKDGYQQGTSADIALKDTPKAYNVVDVSFMKGDGVNRIPTFKPVGI NDSDFRAQVGALNKEGRAVLLALGGADGHVELKAGDEEAFANEIIRQVETYGFDGLDI DLEQSAITAGDNKTVIPAALKIVKDHYKAEGKNFLITMAPEFPYLKPGSAYESYLTSL ANYYDYIAPQLYNQGGDGVWVDETNQWIAQNNDTLKESFLYYMADSFINGTRGYLKIP ANKFVFGLPANVDAAATGYVTDPQIVKNVFTRLQAKGTPVKGIMTWSVNWDAGKNKAG VPYNNSFSNAYGPIVGTK" misc_feature complement(1955616..1956527) /locus_tag="lmo1883" /note="GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18...; Region: GH18_chitinase_D-like; cd02871" /db_xref="CDD:119350" misc_feature complement(order(1955691..1955693,1955967..1955969, 1955973..1955975,1956168..1956170,1956174..1956176, 1956402..1956404,1956510..1956512)) /locus_tag="lmo1883" /note="putative active site [active]" /db_xref="CDD:119350" regulatory complement(1956665..1956670) /regulatory_class="ribosome_binding_site" regulatory complement(1956757..1956782) /regulatory_class="terminator" gene complement(1956848..1958155) /locus_tag="lmo1884" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985809" CDS complement(1956848..1958155) /locus_tag="lmo1884" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="xanthine permease" /protein_id="NP_465408.1" /db_xref="GeneID:985809" /translation="MLGKGKIAALGFQHVLAMYAGAVIVPLLIGGALGFNGEEMTYLV SIDIFMCGIATLLQLTVNRFFGIGLPVVLGCAVQAIAPIILIGQDMGIGAIYGSIIVS GLFVLLIAPFFSKVVRFFPPVVTGSVVTVIGLTLIPVAINNLAGGEGAKDFGSMYNLG LGFGTLLLIILVYRFGQGFSKAIAVLIGLVGGSLFAALYKGISLGPVSEASWFHMPKP FYFGTPTFEWPAIITMILIALVSMVESTGVYFALSDITERKLTQKDLTRGYRAEGLAI MLGGVFNTFPYTAYSQNVGLVQLSGIKTRKVIYAAAGFLIVLGLIPKIGAVTTIIPTP VLGGAMVAMFGMVVAQGIKMLGKVNFTSQENLLIIACAVGVGLGVTVVPDLFNAFPSF VRLFTSNGIVAGSVTAITLNIIFNMIPHRKDKKVADPEPQHAK" misc_feature complement(1956908..1958125) /locus_tag="lmo1884" /note="xanthine permease; Region: pbuX; TIGR03173" /db_xref="CDD:274468" gene complement(1958162..1958740) /locus_tag="lmo1885" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985807" CDS complement(1958162..1958740) /locus_tag="lmo1885" /EC_number="2.4.2.22" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine" /codon_start=1 /transl_table=11 /product="xanthine phosphoribosyltransferase" /protein_id="NP_465409.1" /db_xref="GeneID:985807" /translation="MKLLEEFIQEKGTVLPGNVLKVDAFLNHQIDPVLMQAMGNEFAK RFQDLGITKIVTIESSGIAPAVFAGLALSVPVVFARKKKSVTLTDNLFTSTVYSYTKK ESNDISVSKQFLTADDTILVIDDFLANGQAALGLLEIAEHAGAKVAGIGIVIEKSFQQ GRELLNKTGIPVYSLARIASLENEEILFLEEE" misc_feature complement(1958174..1958740) /locus_tag="lmo1885" /note="xanthine phosphoribosyltransferase; Validated; Region: PRK09219" /db_xref="CDD:181705" misc_feature complement(order(1958273..1958275,1958345..1958359, 1958363..1958371,1958561..1958563,1958567..1958569)) /locus_tag="lmo1885" /note="active site" /db_xref="CDD:206754" regulatory complement(1958167..1958172) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1885" regulatory complement(1958747..1958752) /regulatory_class="ribosome_binding_site" gene 1958821..1958922 /locus_tag="lmos72" /db_xref="GeneID:18245157" misc_RNA 1958821..1958922 /locus_tag="lmos72" /product="Purine" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245157" gene complement(1958968..1960476) /locus_tag="lmo1886" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985806" CDS complement(1958968..1960476) /locus_tag="lmo1886" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carboxypeptidase" /protein_id="NP_465410.1" /db_xref="GeneID:985806" /translation="MVETLEEEFLAYIKKMEALEEALALVYWDLRTGAPAKGMEGRSD VIGVLSEEIFNMQTSEEMAAFIAGLNQDKENLSEITRKTLEESQKTYDLNKKIPSKEY AEYTKLVAQAETAWTTAREQNDFAAFEPFLTKILEMKRKFVEYWGYEENKYDTLLDQY EPGVTVSVLDSVFEKVRDGIMAIREKIENEGVKPDATILNTKISEAKQKEFSIRILNK MGFDFEAGRLDETVHPFATGLNTGDVRITTRYNENDFKMAVFGTIHEGGHAIYEQNFD AALVGTPLANGASMGIHESQSLFYEIIIGSSLAFWKSNYADFQAITKPAFDQVKLEDF YRAVNISESSLIRIEADTLTYPLHIMIRYELEKALINGELEVKDLPKAWGDKYEEYLG IRPDNDTNGVLQDIHWAGGDFGYFPSYALGLMYAAQFFNQMQKEIPNIDAIIASDDYS ELKIWLTEHVHKFGKTKKPLEILTDTTGEGLNPTYLLDLLEKRYAYVYQFNK" misc_feature complement(1958983..1960470) /locus_tag="lmo1886" /note="Zn-dependent carboxypeptidase, M32 family [Posttranslational modification, protein turnover, chaperones]; Region: YpwA; COG2317" /db_xref="CDD:441891" regulatory complement(1960485..1960490) /regulatory_class="ribosome_binding_site" gene complement(1960496..1961644) /locus_tag="lmo1887" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985805" CDS complement(1960496..1961644) /locus_tag="lmo1887" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465411.1" /db_xref="GeneID:985805" /translation="MKTFQLVATAASGLEAIVGKEVARLGYDPKVENGKVYFEGDLSA IARANLWLRVADRVKIVVGVFKATTFDELFEKTKALPWEDYLPLDAQFPVAGKSVKST LYSVPDCQAIVKKAIVNRVSEKYRRSGRLMETGALFKLEVSILKDEVTLTIDTSGAGL HKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPG FNREFVSETWDWMPKQIWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAG LGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWS VYVLTSYELFEEVYGKKATKKRKLYNGYLRTDLYQYWGPRKPRPKKED" misc_feature complement(1960535..1961635) /locus_tag="lmo1887" /note="23S rRNA G2445 N2-methylase RlmL [Translation, ribosomal structure and biogenesis]; Region: RlmL; COG0116" /db_xref="CDD:439886" regulatory complement(1961652..1961657) /regulatory_class="ribosome_binding_site" gene 1961804..1962188 /locus_tag="lmos73" /db_xref="GeneID:18245158" misc_RNA 1961804..1962188 /locus_tag="lmos73" /product="rnpB" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245158" gene complement(1962225..1962566) /locus_tag="lmo1888" /db_xref="GeneID:985801" CDS complement(1962225..1962566) /locus_tag="lmo1888" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465412.1" /db_xref="GeneID:985801" /translation="MTSEQFEYHLTGKEILEKEFKTGLRGYSPEDVDEFLDMVIKDYS TFTQEIEALQAENIRLVQELDNAPLRTSTQPAPTFQAAAQPAGTTNFDILKRLSNLEK HVFGNKLDDNE" misc_feature complement(1962231..1962554) /locus_tag="lmo1888" /note="cell division regulator GpsB; Region: PRK14127" /db_xref="CDD:237616" regulatory complement(1962573..1962578) /regulatory_class="ribosome_binding_site" gene complement(1962698..1963243) /locus_tag="lmo1889" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985803" CDS complement(1962698..1963243) /locus_tag="lmo1889" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465413.1" /db_xref="GeneID:985803" /translation="MKSIAVTGYKNFELGIFKKDADEAVYIKETIKRHLLPLVEDGLE WVIISGQLGIELWAGDVVAELKADYPIKLAILEPFEKQSANWNEANQLWASEVLEKAD YHAFITKRPYESPAQFAARDGFIIDNTDGALLVYDLEKEGSPKFFYDRATQAKEQSNY YIDCIDFYALQEVVEDMNQTF" misc_feature complement(1962701..1963243) /locus_tag="lmo1889" /note="hypothetical protein; Provisional; Region: PRK13660" /db_xref="CDD:237461" gene complement(1963240..1963605) /locus_tag="lmo1890" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986335" CDS complement(1963240..1963605) /locus_tag="lmo1890" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465414.1" /db_xref="GeneID:986335" /translation="MELLNRTEKLLLQNEKNWELYLSNREEAKPFDFYKDMKPFVDEA KNSADAFLELAIPWVNKERPPYLGELQLRQACDNVQMTAVSAFNGKSFYKHFLDHYQS TKYTLTRVRDFLKRKEELM" misc_feature complement(1963264..1963587) /locus_tag="lmo1890" /note="Bacterial domain of unknown function (DUF1798); Region: DUF1798; pfam08807" /db_xref="CDD:400936" regulatory complement(1963251..1963256) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1890" regulatory 1963841..1963846 /regulatory_class="ribosome_binding_site" gene 1963852..1964457 /gene="recU" /locus_tag="lmo1891" /db_xref="GeneID:985797" CDS 1963852..1964457 /gene="recU" /locus_tag="lmo1891" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Holliday junction-specific endonuclease" /protein_id="NP_465415.1" /db_xref="GeneID:985797" /translation="MAIGYPNGKKYAASHEVLPQQKRKAPVTYGKRGMSLEDDLNDTI AYYLTHEIAVIHKKPTPVQIVSVDYPKRSSAKIKEAYFKTPSTTDYNGVYKGKYVDFE AKETQNTTSFPLSNFHDHQMTHMANVLKQDGIVFVIIAFQKLGETHFIPFEKFYPFWE RMQSGGRKSVTIAEIQDVSDQIPYGLNPRLDFLQSIDKLYF" misc_feature 1963852..1964454 /gene="recU" /locus_tag="lmo1891" /note="Penicillin-binding protein-related factor A, putative recombinase [General function prediction only]; Region: YotM; COG3331" /db_xref="CDD:442560" regulatory 1964473..1964478 /regulatory_class="ribosome_binding_site" gene 1964489..1966972 /gene="pbpA" /locus_tag="lmo1892" /db_xref="GeneID:985798" CDS 1964489..1966972 /gene="pbpA" /locus_tag="lmo1892" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 2A" /protein_id="NP_465416.1" /db_xref="GeneID:985798" /translation="MADKPQTRSQYRNKQSGGSKKKSQKRGKRVAANIFKTIFFVGLF LAFFGIAAGATVFYDYAKDAPKLTDSKLRDPLSSKLLDKDGKVFAEVGTERREYIEYK DIPETLKNAILTTEDARFYEHDGIDPIRLGGAVIANLTDGFGAEGASTLSQQIIKMSY LDYTNKTLARKAQEAWLALQLEEKYSKNDILEIYVNKVYMSDRVHGMQTASEHYFGKN VKDLTLAQTALLAGMPQSPNNYNPYEHPEAAKKRRDQVLTNMYTHDKITKEEMTEAQK TPITTGLRSKKDREDKIYKYDSYVTQVLSEIPKEYDVYRDGLTIHTALDRDAQEYTEK MLNTNEIVNFTDDEMQAGIVLQDTKTGRVQAIGGGRKQKVTRGYNYATQVKRSVGSTM KPIADYGPAFEYLDWSTAHILEDEPYTYSGGTPINNWDFGYKGPISVRQALYQSRNIP ALKTLQAVGLDKSEEFVNKLGITYDEGQNVESNAIGANSSNPMQMAGAYAAFGNKGIY NKPHTVTKIVLSDGQTEIDTEPQSTVAMKESTAYMVSDVLKDVLSIGTGTSAAVPGVP AAGKTGTTNIPPEFTSKYYYPSGAARDSWFAGYTTNYSIAVWTGYDDKKKYVSASEQK IAQRMFSKLMAHASAGKTTADFKMPSNVVSVPILKGSNPIARAAQGTSSDKVSYELFL SGTAPTKTASTPEDEKKKAEEAAKKKKAEEDKKKTDEEKKKEEEAKKKAEEEAKKKAE EEAKNLTAPAGLRASYNAGSKQINVSWSAVEGATYEVTVNGSTTTVSSTSVSVSGGNP GDTVSINVVAVKDGKRSPASSTTVKIPDS" misc_feature 1964771..1966408 /gene="pbpA" /locus_tag="lmo1892" /note="penicillin-binding protein, 1A family; Region: PBP_1a_fam; TIGR02074" /db_xref="CDD:273955" regulatory 1966981..1967010 /regulatory_class="terminator" regulatory complement(1966981..1967010) /regulatory_class="terminator" gene complement(1967015..1967506) /locus_tag="lmo1893" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985795" CDS complement(1967015..1967506) /locus_tag="lmo1893" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1893" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465417.1" /db_xref="GeneID:985795" /translation="MAEFKYAVELTHPDFPAPDVILEEYDPESIYVSGLPFWQEQQFF TKGGGVIPWKNETERACRKLAKHMTNLAESMEADLKVHKKPSPVTVRDALGIFLSILF WSNHRPVQLDNLMDQIKTLETKPLNLDERLEYVLKRGNTYLGFRQLNELMLEQRKLIA KRS" gene complement(1967499..1968158) /gene="nth" /locus_tag="lmo1894" /db_xref="GeneID:985799" CDS complement(1967499..1968158) /gene="nth" /locus_tag="lmo1894" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="endonuclease III (DNA repair)" /protein_id="NP_465418.1" /db_xref="GeneID:985799" /translation="MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCT DVLVNRVTASLFEKYHSPEDYLAVPLEELMEDIRSIGLYRNKAKNIQGLSEKILTEFN GEVPKTHAELESLPGVGRKTANVVLSVGFGVPAIAVDTHVERISKRLGICRWKDSVVE VEETLKRKLPKELWSDAHHYMIFFGRYHCKARNPECPTCPLLYLCREGKKQAKVRGFD G" misc_feature complement(1967532..1968128) /gene="nth" /locus_tag="lmo1894" /note="Endonuclease III [Replication, recombination and repair]; Region: Nth; COG0177" /db_xref="CDD:439947" regulatory complement(1967511..1967516) /regulatory_class="ribosome_binding_site" /gene="nth" /locus_tag="lmo1894" regulatory complement(1968167..1968172) /regulatory_class="ribosome_binding_site" gene complement(1968169..1968888) /gene="dnaD" /locus_tag="lmo1895" /db_xref="GeneID:985793" CDS complement(1968169..1968888) /gene="dnaD" /locus_tag="lmo1895" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="chromosome replication initiation protein" /protein_id="NP_465419.1" /db_xref="GeneID:985793" /translation="MNPKILEKWMAEGQVTLPQVLVKNYATIGLNEIELVLLLQIQSF AAEAEFFPSMEMLTNRTTLPLEETIKTMDSLLKKGVIAIEQSQDNSRMISEQYNLAPL WGKLVALYENKEADSKHEKELEKQTNLYTLFEAEFGRPLSPMEAEMLSAWVEQDRTSP DLIKEALKEAVISQKLNFRYIDRILLNWSKQGVKTTEDAKRVAEEFHQNGRTSQTINQ TEVKKSAGSIPLYDWLEKRKG" misc_feature complement(1968190..1968504) /gene="dnaD" /locus_tag="lmo1895" /note="DNA replication protein DnaD [Replication, recombination and repair]; Region: DnaD; COG3935" /db_xref="CDD:443136" regulatory complement(1968897..1968902) /regulatory_class="ribosome_binding_site" regulatory complement(1969006..1969028) /regulatory_class="terminator" gene complement(1969037..1970329) /gene="asnC" /locus_tag="lmo1896" /db_xref="GeneID:985792" CDS complement(1969037..1970329) /gene="asnC" /locus_tag="lmo1896" /EC_number="6.1.1.22" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA" /codon_start=1 /transl_table=11 /product="asparaginyl-tRNA synthetase" /protein_id="NP_465420.1" /db_xref="GeneID:985792" /translation="MKITINQASEFVGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQ GVVVKAEVGDDIFATAKALTQETSLYVTGTINEDTRSPFGYEMAVSSVEVISESHDYP ITPKEHGTEFLMDHRHLWLRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGS APEGTTELFHTKYFEEDAFLSQSGQLYMEAAAMAFGKVFSFGPTFRAEKSKTRRHLIE FWMIEPEMAFYKLEDSLQVQENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPR ITYTEAIERLHELGFDDIVWGDDFGAPHETAIADSFEKPVFITHYPKAIKPFYMPEDP ENDQVVLCADMIAPEGYGEIIGGSERIHDLETLQARMEDFDLDQEAYSWYLDLARYGS VPHSGFGLGLERTVAWISGTEHVRETIPFPRLLNRLYP" misc_feature complement(1969040..1970329) /gene="asnC" /locus_tag="lmo1896" /note="asparaginyl-tRNA synthetase; Validated; Region: asnC; PRK03932" /db_xref="CDD:235176" regulatory complement(1970338..1970343) /regulatory_class="ribosome_binding_site" gene complement(1970343..1971524) /gene="aspB" /locus_tag="lmo1897" /db_xref="GeneID:985794" CDS complement(1970343..1971524) /gene="aspB" /locus_tag="lmo1897" /EC_number="2.6.1.1" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate" /codon_start=1 /transl_table=11 /product="aspartate aminotransferase" /protein_id="NP_465421.1" /db_xref="GeneID:985794" /translation="MDLPLSKRVKGVAPSPTLAITAKAKQMKQEGIDVIGLGAGEPDF NTPQNIIDAAIESMNKGFTKYTPSSGIIELKQAIVDKLKKDQFLNYETNQIFVGTGAK HVLYSAFQTILDPGDEVIIPVPYWVTYPEQVKLAGGIPVFVETGFDADFKISAADFEK AITKKTKAIVLNSPNNPSGMCYTKEELIAIGEVAEKHQIYILSDEIYEKLYYGNKADL VSIASLSDRLYDLTIVINGVSKAYSMTGWRIGYAAANKEIIAGMSKLADHLTSNPTAN AQYAALEAYVGSQEVPEKMYQAFEERMERFYPELNSIPGFKPKKPDGAFYFFIEVKEA AHKKGFQDVDAFVAALLEEAKVAVIPGSGFGMPDYIRLSYATNPDLFQEAINRIKSFM K" misc_feature complement(1970346..1971512) /gene="aspB" /locus_tag="lmo1897" /note="aspartate aminotransferase; Provisional; Region: PRK05764" /db_xref="CDD:235596" misc_feature complement(order(1970781..1970783,1970805..1970810, 1970814..1970816,1970904..1970906,1970997..1970999, 1971147..1971149,1971219..1971227)) /gene="aspB" /locus_tag="lmo1897" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99734" misc_feature complement(order(1970685..1970687,1970694..1970696, 1970781..1970789,1970925..1970927,1971117..1971119, 1971216..1971218)) /gene="aspB" /locus_tag="lmo1897" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:99734" misc_feature complement(1970805..1970807) /gene="aspB" /locus_tag="lmo1897" /note="catalytic residue [active]" /db_xref="CDD:99734" regulatory complement(1971532..1971537) /regulatory_class="ribosome_binding_site" gene complement(1971547..1972131) /locus_tag="lmo1898" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985789" CDS complement(1971547..1972131) /locus_tag="lmo1898" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465422.1" /db_xref="GeneID:985789" /translation="MYLCENENAYRRRNSGNLEIEMSEITLRNRKPKRKIGKWIAIIL GIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLT GKNSKNKNIIVWVPKKKSDKVYVKFASDGITEQQARDKVTKEKKPKKILHVNLGMEKE TPIWEVAYLDKNDKLNYFDINFETGEWYREIENL" misc_feature complement(1971550..1971975) /locus_tag="lmo1898" /note="Uncharacterized conserved protein YpmB, contains C-terminal PepSY domain [Function unknown]; Region: YpmB; COG5353" /db_xref="CDD:444134" regulatory complement(1972143..1972148) /regulatory_class="ribosome_binding_site" gene complement(1972176..1974962) /gene="dinG" /locus_tag="lmo1899" /db_xref="GeneID:985791" CDS complement(1972176..1974962) /gene="dinG" /locus_tag="lmo1899" /experiment="EXISTENCE:[PMID:19448609]" /note="unwinds DNA" /codon_start=1 /transl_table=11 /product="bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon" /protein_id="NP_465423.1" /db_xref="GeneID:985791" /translation="MKQKRYIVVDLETTGNQASREDRIIQFAACFVESGKRLETYTTF LNPEKPIPAFIQELTGISPKDVKNAPLFEDVAPIIANLLEDTIFVAHNVSFDWTFLER EMTRAGISLGKMKKLDTVELARIMYPGIDSYKLQDLSDEFNLGHDKPHRADSDAEVTA DLLLLLLEKLENLPLPVIRQMTTISGSLKSYLPELLFEIEMRKERENKPLNPNFVEHR GIVIRKKEVEKPTYSRADLLEFPETDEAKMALFKKAGAPLYARSGQFEMMNLVFQAMK SGKHALIEAGTGIGKSLGYFLPAIYQAKQAELPVVISTYTNLLQAQLFEKDVPLLTKL TGFKVKASLLKGRDHYLNLFKFEQLLQEVDTQYDVVVTKLKLLVWLTETTTGDIDEVN LSSGGELFWNRMKHTGWFLSEKHDPWLAHDFYKFNIKQAKNADLVIVNHALLLNDHFS GRETLPKYAFAVIDEAHHFADSARMQGSFVLSYRKLKYFLNQLGSLEKYSLLTRLAMA FPEADSLYDLDIAAMKLSDAVEELFVLLKMQLNFARKNLQEVVLVENSEKDAWNDKVY YAAEKVLYLLKESEKNMETLLEQGKLEENELGEAESAFLEEMYAFLLDWKNMAKQLEQ MLHKKSPILTIYLQADKNHSISSIRLKAVLMEVEPTLGKEFFAKKESVIMTSATLTVK GKFDYLRKSLGLEEEQIMEKCIPSPFDYKENARVMIPDDMPPIKDTPIERYTAELAKY IRHIAVKTNGRMLVLFTASDMLQKTYYHMKNEKSLEEYVVLAQGVSAGSAARLTKQFQ MFDKAILLGTTSFWEGIDIPGEDLSCLVIVRLPFAPMDDPYTKAQISLRKERGENAFQ TYSLPEAVLRFKQGFGRLIRRESDRGIVFVFDNRVDTTKFGKAFLESIPSAPILKGKQ ADLLEEVSEFFKEG" misc_feature complement(1972188..1974959) /gene="dinG" /locus_tag="lmo1899" /note="bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated; Region: PRK08074" /db_xref="CDD:236148" regulatory complement(1974968..1974973) /regulatory_class="ribosome_binding_site" gene complement(1975059..1975442) /gene="panD" /locus_tag="lmo1900" /db_xref="GeneID:985787" CDS complement(1975059..1975442) /gene="panD" /locus_tag="lmo1900" /EC_number="4.1.1.11" /experiment="EXISTENCE:[PMID:19448609]" /note="Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5)" /codon_start=1 /transl_table=11 /product="aspartate alpha-decarboxylase" /protein_id="NP_465424.1" /db_xref="GeneID:985787" /translation="MFRTMMNGKIHRATVTEANLNYVGSITIDSAILEAVDMLPNEKV QIVNNNNGARIETYIIPGEPGSGVICLNGAAARHVQVGDVVIIMSYGMFTDEEAKTHE PKIVVLDEKNHIEMILPEEKAHTTL" misc_feature complement(1975101..1975442) /gene="panD" /locus_tag="lmo1900" /note="Aspartate 1-decarboxylase [Coenzyme transport and metabolism]; Region: PanD; COG0853" /db_xref="CDD:440614" gene complement(1975446..1976303) /gene="panC" /locus_tag="lmo1901" /db_xref="GeneID:985788" CDS complement(1975446..1976303) /gene="panC" /locus_tag="lmo1901" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine" /codon_start=1 /transl_table=11 /product="pantoate--beta-alanine ligase" /protein_id="NP_465425.1" /db_xref="GeneID:985788" /translation="MLIIRNKQELKEVILKQKQANKTIGFVPTMGFLHEGHMTLVSHA RKESDFVVMSVFVNPTQFGPNEDFDAYPRDEAHDAKLAEEGGVDILFVPTVEEIYPTE LSTKLHVDKRVSVLDGADREGHFDGVVTVLTKLFHLVSPDNAYFGQKDAQQVAVVSGL VEDYFFPVNLRIIATVREADGLAKSSRNVYLTEKERKEAPVIHEALQLGRKLIESGET NQAKIVQMMTEKINEQTSHELIAYLAIYSYPEFTPVTDWSKGIIIAAAVKYSKARLID NELINVKRR" misc_feature complement(1975461..1976303) /gene="panC" /locus_tag="lmo1901" /note="Panthothenate synthetase [Coenzyme transport and metabolism]; Region: PanC; COG0414" /db_xref="CDD:440183" regulatory complement(1975452..1975457) /regulatory_class="ribosome_binding_site" /gene="panC" /locus_tag="lmo1901" gene complement(1976307..1977140) /gene="panB" /locus_tag="lmo1902" /db_xref="GeneID:985786" CDS complement(1976307..1977140) /gene="panB" /locus_tag="lmo1902" /EC_number="2.1.2.11" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate" /codon_start=1 /transl_table=11 /product="3-methyl-2-oxobutanoate hydroxymethyltransferase" /protein_id="NP_465426.1" /db_xref="GeneID:985786" /translation="MKRPVDFFAMKENGEKITMITAYDYPSAKNVEQAEADMILVGDS LGMVVLGYDSTVPVTIDDMIHHTKAVKRGATDTFIVTDMPFMTYHGSVNETIQNARKI IQESGAHAVKLEGAGEVVNKIARLTEAGAPVVAHLGLTPQSVGLTGSYKVRAKSAQEA QELMDNALAVEAAGAIAIVLEAIPRQLAEKVSKALSIPTIGIGAGLETDGQVLVYHDI IGYGISRRAKFVKAYADIDETIEPALASYVKEVKAETFPEVKHSFTMAEEDLKGLYGR E" misc_feature complement(1976349..1977140) /gene="panB" /locus_tag="lmo1902" /note="3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed; Region: panB; PRK00311" /db_xref="CDD:234723" regulatory complement(1976313..1976318) /regulatory_class="ribosome_binding_site" /gene="panB" /locus_tag="lmo1902" regulatory complement(1977148..1977153) /regulatory_class="ribosome_binding_site" gene complement(1977307..1977780) /locus_tag="lmo1903" /db_xref="GeneID:985782" CDS complement(1977307..1977780) /locus_tag="lmo1903" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="NP_465427.1" /db_xref="GeneID:985782" /translation="MKKIVLLLALITVVLTVGACSDNKKETEEKANKTEEESATFLTT ISTKDFKQKMADKTTGFVYVGRPTCEDCQAFQPILKKELKKRQPDQKMAYYNTDKASE KSRDNMIALLEKMDIDSVPTMVYLKDGKVASTYAATDEPAKLTNWMNKVSGEVSE" misc_feature complement(1977334..1977639) /locus_tag="lmo1903" /note="TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox...; Region: TRX_family; cd02947" /db_xref="CDD:239245" misc_feature complement(order(1977565..1977567,1977574..1977576)) /locus_tag="lmo1903" /note="catalytic residues [active]" /db_xref="CDD:239245" regulatory complement(1977788..1977793) /regulatory_class="ribosome_binding_site" gene complement(1977928..1978905) /gene="birA" /locus_tag="lmo1904" /db_xref="GeneID:985785" CDS complement(1977928..1978905) /gene="birA" /locus_tag="lmo1904" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_465428.1" /db_xref="GeneID:985785" /translation="MKNNREKLLALFTESDGTYLSGQEIADSLGCSRTAVWKQMEALR KEGFEIEAVRNRGYRLSATAEQYTKDALLLGLETKFIGQHLEVHESVNSTQIIAHQQI ETSPEGTVIVADEQTAGKGRLLRPWSSKKGEGIWMSVILKPQIPIQKVPQFTFIASLA ITEAIENITKLEPKIKWPNDIYIGKRKICGVLTEMQAEAETIHAVIIGMGINVNQQEF PEEIKDKASSLKLELGESVSRKALLQEILTSLEKYYELFLDKGFAPIKLLWETKAIPF GEKLTASTTKGKIHGQVKGISDEGVLLLQDTLGEVHSIYSADILLDNEK" misc_feature complement(1978732..1978890) /gene="birA" /locus_tag="lmo1904" /note="HTH domain; Region: HTH_11; pfam08279" /db_xref="CDD:429896" misc_feature complement(1977943..1978656) /gene="birA" /locus_tag="lmo1904" /note="Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme transport and metabolism]; Region: BirA2; COG0340" /db_xref="CDD:440109" gene complement(1978895..1980076) /gene="cca" /locus_tag="lmo1905" /db_xref="GeneID:985781" CDS complement(1978895..1980076) /gene="cca" /locus_tag="lmo1905" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity" /codon_start=1 /transl_table=11 /product="tRNA CCA-pyrophosphorylase" /protein_id="NP_465429.1" /db_xref="GeneID:985781" /translation="MNDVFLKALPVLQKLTTAGFEAYFVGGSVRDYLLNRTISDVDIA TSAFPEEVKEIFQSTYDTGIAHGTVTVRENNEFYEVTTFRTEGTYEDFRRPSEVKFIR SLEEDLQRRDFTMNAIAMDEHFALHDPFSGQEAIKNKAIKAVGKASERFHEDALRMMR GVRFLSQLDFQLDSETEKALESQIGLLQHTSVERITVEWLKMIKGPAIRRAMDLLLKV EMETYLPGLKGEKKALTEFGSWDWGKRTTDDAIWLGLVVTVQPNNVNAFLKAWKLPNK TIQLVSKAYQYALKMKETWLAEELYHAGKAVFSLVNELNIIRGKENNQHKLSQAYEAL PIHSKKDLAITGADLLKWSGESAGPWVKETLDKLECGVLCNEINNEKNQIKRWLGYHE E" misc_feature complement(1978901..1980076) /gene="cca" /locus_tag="lmo1905" /note="tRNA CCA-pyrophosphorylase; Provisional; Region: PRK13299" /db_xref="CDD:237339" regulatory complement(1978916..1978921) /regulatory_class="ribosome_binding_site" /gene="cca" /locus_tag="lmo1905" regulatory complement(1980085..1980090) /regulatory_class="ribosome_binding_site" gene complement(1980091..1980495) /gene="mgsA" /locus_tag="lmo1906" /db_xref="GeneID:985777" CDS complement(1980091..1980495) /gene="mgsA" /locus_tag="lmo1906" /EC_number="4.2.3.3" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of methylglyoxal from glycerone phosphate" /codon_start=1 /transl_table=11 /product="methylglyoxal synthase" /protein_id="NP_465430.1" /db_xref="GeneID:985777" /translation="MHIALIAHDEKKDLMVGFATAYKHLLEPHQLYATGTTGLRIIEA TGLTVHRFKSGPLGGDQQIGARISENKMDLVIFLRDPLTAQPHEPDVTALIRLCDVYE IPLATNIGTAEILIRGLGAGFLDWRDLRRNDE" misc_feature complement(1980094..1980495) /gene="mgsA" /locus_tag="lmo1906" /note="methylglyoxal synthase; Validated; Region: mgsA; PRK05234" /db_xref="CDD:179969" misc_feature complement(order(1980235..1980237,1980316..1980318, 1980331..1980336,1980385..1980390,1980394..1980396, 1980460..1980462,1980478..1980480)) /gene="mgsA" /locus_tag="lmo1906" /note="active site" /db_xref="CDD:238710" misc_feature complement(order(1980154..1980156,1980163..1980174, 1980181..1980198,1980202..1980210,1980217..1980219, 1980226..1980228,1980253..1980255,1980292..1980294, 1980310..1980315,1980325..1980330,1980334..1980339, 1980388..1980390,1980469..1980471)) /gene="mgsA" /locus_tag="lmo1906" /note="dimer interfaces [polypeptide binding]; other site" /db_xref="CDD:238710" misc_feature complement(order(1980235..1980237,1980316..1980318)) /gene="mgsA" /locus_tag="lmo1906" /note="catalytic residues [active]" /db_xref="CDD:238710" regulatory complement(1980501..1980506) /regulatory_class="ribosome_binding_site" gene complement(1980511..1981302) /gene="dapB" /locus_tag="lmo1907" /db_xref="GeneID:985778" CDS complement(1980511..1981302) /gene="dapB" /locus_tag="lmo1907" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate reductase" /protein_id="NP_465431.1" /db_xref="GeneID:985778" /translation="MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEM VEFSSLDVPVFGNLSEMLEEIKPDCVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTP EQISELRTIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAP SGTGVKTAEMMAETREFVKQGAADEVELIEGARGAEYEGMRIHSVRLPGLVAHQEVIF GAEGQGLTIRHDSYDRISFMSGVALSVRKTKELETLIYGLENILD" misc_feature complement(1980517..1981302) /gene="dapB" /locus_tag="lmo1907" /note="4-hydroxy-tetrahydrodipicolinate reductase [Amino acid transport and metabolism]; Region: DapB; COG0289" /db_xref="CDD:440058" gene complement(1981299..1981634) /locus_tag="lmo1908" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985779" CDS complement(1981299..1981634) /locus_tag="lmo1908" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465432.1" /db_xref="GeneID:985779" /translation="MAKTMAEIQKEVDDFIGGFEEGYFSPLAMMARITEETGELAREI NHYYGEKPKKTSEPTKTVAEELGDCLFVLTCMANSLDIDMEKAHDTVMAKFKDRDKDR WTKKEEKAK" misc_feature complement(1981338..1981616) /locus_tag="lmo1908" /note="Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain putative pyrophosphatase YpjD from Bacillus subtilis and its bacterial homologs; Region: NTP-PPase_BsYpjD; cd11531" /db_xref="CDD:212138" misc_feature complement(order(1981350..1981355,1981359..1981385, 1981389..1981391,1981395..1981397,1981407..1981409, 1981416..1981418,1981422..1981439,1981443..1981451, 1981500..1981505,1981512..1981517,1981524..1981526, 1981533..1981538,1981545..1981547,1981554..1981559, 1981590..1981592,1981599..1981604,1981611..1981613)) /locus_tag="lmo1908" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:212138" regulatory complement(1981313..1981318) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1908" regulatory complement(1981643..1981648) /regulatory_class="ribosome_binding_site" regulatory 1981759..1981764 /regulatory_class="ribosome_binding_site" gene 1981774..1982640 /locus_tag="lmo1909" /db_xref="GeneID:985776" CDS 1981774..1982640 /locus_tag="lmo1909" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465433.1" /db_xref="GeneID:985776" /translation="MLKTLRTKNICFIMLGTAIYAFGLVNFNIANNLGEGGLAGVTLF LLHFFQIDPAYSNLILNIPLFILGWRVLGNRSLIYTGIGTVSLSLFLWIFQRIPYTLD LHSDLLLVALFAGGFSGIGLGLVFRYGGTTGGSDIIAKLLNHTKGISMGRTLFAIDAI VLVASLSYLDVRQVMYTLVAVFIGSRVIDFVQEGAYAARGALIISKDNDAIASHVMLA MNRGVTVLEGRGGFSKKDQDVLYIVVAKNEIIQLKNIVQAIDPHAFVSVSVVHDVMGE GFTLDENKNPIY" misc_feature 1981789..1982622 /locus_tag="lmo1909" /note="Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains [Function unknown]; Region: YitT; COG1284" /db_xref="CDD:440895" gene complement(1982630..1983736) /locus_tag="lmo1910" /db_xref="GeneID:985775" CDS complement(1982630..1983736) /locus_tag="lmo1910" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_465434.1" /db_xref="GeneID:985775" /translation="MQKVVIIGGGIVGASAAYLLSKENVQVTLIDSDEAGQATRAAAG IICPWLSKRRNKYWYELAKNSAAFYKELAETLEGDTGRDSGYKQVGVLALRQTEEKLA ELFNLARERRLDAEVMGEVAKLSEAETKQRFPLVKSGFGSVYVSGAARVNGGLFCETL LYAAKENGVKIKAGRAHFSSDGEVVIDGEKEHYDKLILATGAWLKDLLQDAGFQTDVL AQKGQLLELNFSEFQTDDWPVILPPSAKSIVPFDNGKIIVGATHEKAAGFNTEPTAEG KAEILTEVSQFMEGDLASKVAHVSVGTRPYTPDFTPIIGQLPGFESVFLANGLGASGL TTGPYVGRILADLALGNASDFVLENYEPSKYISR" misc_feature complement(1982648..1983697) /locus_tag="lmo1910" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" regulatory complement(1983745..1983750) /regulatory_class="ribosome_binding_site" regulatory 1984043..1984048 /regulatory_class="ribosome_binding_site" gene 1984056..1985192 /locus_tag="lmo1911" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985774" CDS 1984056..1985192 /locus_tag="lmo1911" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="NP_465435.1" /db_xref="GeneID:985774" /translation="MPNILDSLWNSMALFLSALFFHGMALRSIREKKPAWFQIKFANE FINYALGIYYGLLGVYFIIRGLPGTDSGIYTDMLLNILIVLHLFSSAGPATIALLLIV SGKLFLGDALFANLIYVFLIIGFHFVCMEVAKLRLSSVQKVVLVKLSAIPLMLFYLHQ KIHLAYTMNDLPVWILYFLVSFFITFIIVSAAYYIDTSNKLIYDLQQSTILDPLTGLT NFRHFENAFDAAFNHATLKKSNLSVIIIDIDYFKRVNDTYGHLVGNGVLSTFSQMLLK ISFPPNTVISRIGGEEFAIILPNINVSETEHLAEKIRRKVEKIDVPIVASGSVITISA GIANYDGRNYPSANELLNAADQALYNAKRNGRNQVHIRETEPVI" misc_feature 1984347..1985168 /locus_tag="lmo1911" /note="GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants [Signal transduction mechanisms]; Region: GGDEF; COG2199" /db_xref="CDD:441801" regulatory 1985203..1985208 /regulatory_class="ribosome_binding_site" gene 1985218..1986345 /locus_tag="lmo1912" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985772" CDS 1985218..1986345 /locus_tag="lmo1912" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="NP_465436.1" /db_xref="GeneID:985772" /translation="MFELVNSYIDSLALFLAILFIQGMSFRKIRQYRPNWFQNGSRRL FLSILLGVYYGLAGIYFIYEGAYENNPVIYTNMRILILMVTSVFGGRIPLIFAYLVML FGRISFDIASPTTSRYVILMTLIFAACLLVTFWKKQRFSRFVALIILNFPAILYYFVN NFDEGRILRGFEIIEYFLLFFVTALLVFYACNYIDKSNLVIQNLTETAMTDSLTNLPN MRFFTQQFGWIFTKSQKRKKSLSLFIIDIDHFKEINDFHGHQAGNTVLAQFSSILKNR TFPPRTMFARIGGEEFAVLLQNVGTEQAALIADFFREEVERAKFPYNPASGKVTVSIG VASASSNFSTTESLFEAADQALYQAKQNGRNQIAVHQGELE" misc_feature 1985569..1986327 /locus_tag="lmo1912" /note="GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants [Signal transduction mechanisms]; Region: GGDEF; COG2199" /db_xref="CDD:441801" regulatory 1986329..1986334 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1912" gene 1986342..1987346 /locus_tag="lmo1913" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985769" CDS 1986342..1987346 /locus_tag="lmo1913" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465437.1" /db_xref="GeneID:985769" /translation="MKRFILILILLIFIGAGFFIFLRPESKKTVSAPKETTPTSTSVQ TYVKENYTAKNGLIMDYKNTEEPHYLAESIGLYMEYLVEVNDSKTFQKQVNHLEKYFI AEDNFIKWEATDSTTTNAIVDDFRITEALYQASEKFSFPSYKKMADKFLTNTKKYSAE QGVPVDFYDFVHKKKADTLHLSYLNIQAMQQINYRDKAYLPIQTINADPFFTEVFQNG QFKFADQKEVNMIDQMLIAIAYYDENGDIEPNFDNFLQTELASKGKIYARYQRETKKP SSENESTAVYAFLTQYFNKTNQAKNGKITKELLEKMDTSNPETTHFFDYINKEITLKK " gene 1987365..1988048 /locus_tag="lmo1914" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985770" CDS 1987365..1988048 /locus_tag="lmo1914" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465438.1" /db_xref="GeneID:985770" /translation="MKKPSVREIIDQNHFDTIYEPIVVVENTQIFGYESLTRLKTDHW NAISDFIEEAEQDGLQKAFELLTLHNAVKRFNKSGDTPLFVNISYDTFLENQEELHDT LLDNGKIVFEFLETSKLPQERMNDLEKQLLLFQKKHETKFAIDDFGSGYADLHRVFAH HSDFVKTDRLLLRDLFESDGKKIFFEQLHNYVKKHHKSLIVEGVETKEQLEFLQEIGI PYAQGYYFH" misc_feature <1987380..1988042 /locus_tag="lmo1914" /note="EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) [Signal transduction mechanisms]; Region: EAL; COG2200" /db_xref="CDD:441802" regulatory 1988145..1988150 /regulatory_class="ribosome_binding_site" gene 1988159..1989802 /locus_tag="lmo1915" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985767" CDS 1988159..1989802 /locus_tag="lmo1915" /experiment="EXISTENCE:[PMID:19448609]" /note="malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate" /codon_start=1 /transl_table=11 /product="malate dehydrogenase" /protein_id="NP_465439.1" /db_xref="GeneID:985767" /translation="MTLKSGFDYMNNPLLNKGTAFSKEERASYQLDGLLPPIIETIEQ QAVRIETQIENLETPLHKHRLLTNLYNENRTLYYYVVTKNVTDYLPIIYTPTIGDAVI QYHKDYTAPDEALFVDAFAPEKLSASIKNYAKNNPNIDMIVITDGEGVLGIGDWSVNG VKIAVGKLAVYTVAAGLAPDRVLPVVIDAGTNNETLLNDPLYLGNKRPRLSESEYDAF IASFVNVMKEVFPKAILHWEDFGRANASRILHNYRDKICTFNDDIQGTGAMVVAAVLA TIQVSRIPLSEQKIIIFGAGTAGIGIADQLSAQLMRETGLPFEKAKKHFYLVDRKGLV LDNMTDLTTGQKKYAHPSAEWSNVPTDTLENLVEAVHPTMLIGCSGVTGAFKESIVKK MTQYTERPAILPLSNPTKLAEATASDLIQWTDGKALIVTGSPSKPVEYQNTTYEIGQA NNALLYPGLGLGALVTRAKYITDDMLAAASMAVAEQISPNKAGAALLPHVRTLRETSR AVAIAVANQAIKENIHQVELTNVIEAIELEMWQPIYKGV" misc_feature 1988159..1989799 /locus_tag="lmo1915" /note="oxaloacetate-decarboxylating malate dehydrogenase; Region: PRK13529" /db_xref="CDD:237414" regulatory 1989793..1989798 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1915" gene 1989805..1990812 /locus_tag="lmo1916" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985771" CDS 1989805..1990812 /locus_tag="lmo1916" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidase" /protein_id="NP_465440.1" /db_xref="GeneID:985771" /translation="MFYKTKQSLDQLVQNGSTPGISYQIKTNHLEENNIMGLKSVFPE AEILPRTTENIYDIASLTKVIATTTRILQLIEQQRFQLNDPIQVYLPDFQYNNVTILH LLTHSSGLAQNIPNFSMNNREDVMRYVYATPQINTPGTVVTYADANFLLLGYLISKLD GNYEKAIQNNILEPLIMTNTSFHPVNKKQVIPTELDQTRGLIQGEVHDFKAWTAKSGT GHAGLFSTLSDLSKFRDALMLQLGAPILSEKTWQLMQINHTPGLNRSRGLGWDLRGES VLYHTGFTGTFMVLDLKRQASLIVLSNRVHPSRANPNFVDKRDSIVDTFIEEVSNTKE V" misc_feature 1989823..1990785 /locus_tag="lmo1916" /note="CubicO group peptidase, beta-lactamase class C family [Defense mechanisms]; Region: AmpC; COG1680" /db_xref="CDD:441286" regulatory 1991033..1991038 /regulatory_class="ribosome_binding_site" gene 1991047..1993326 /gene="pflA" /locus_tag="lmo1917" /db_xref="GeneID:985766" CDS 1991047..1993326 /gene="pflA" /locus_tag="lmo1917" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="pyruvate formate-lyase" /protein_id="NP_465441.1" /db_xref="GeneID:985766" /translation="MTKAWDGFKGTAWQENISVGQFVQDNYTPYDGDESFLEKSTPRT TKLNEKINKLVEEMDAKGGVLDMDNAIVSNVASHKAGYVDQENEVIVGLQTDKPFKLA FMPNGGLRTAEQCLTDNGYSIDQELHDFYVKNRSTANDGIFRAYTDDIKRARHSHIVS GLPDAYSRGRIIGLYQKPALYGVDRLIAEKQQDLKKIAISSDENIRLREEIWLQIKAL KDLIVLGNEYGLELGRPAENATEAVQWTYMGYLASIKQANGAASSFGRIPIFLDIYIQ RDLEKGIITEFDAQELIEQLTLKLRMVRFARTDGYNELYASNPTFVTTSMAGMGADGR HRVTKTDYRFLHCLDNLGNSAEPNLTVLWDARLPESFKEYCMKMSVKHSSIQYENDKL MQEEGYGDMQCISCCVSPLNPEADKDKGETHNLQYFGARVNVLKCLLGAINGGKDDLH KNQVFDVVEPITTEYLEYEEVLEKFDKSMDWLTDTYVDAMNIIHFMTDKYNYESMQMA FLPSKVTANMGFGICGFANVVDSLSAIKHAKVKTIRDEDGFVYDYEVEGDFPRYGEND DRADDIAVMVLKMFKDKLDSHKLYKDSEATVSVLTITSNVAYSKQCGNSPVHKGPVFD ENGKIVKEPEFFSPGANPSNKAKGGFLDNLASLSKLPFHYANDGISLTIQGAPKMFGK TTEEQHHNLVGILDGYFTKGGQHINLNVLNHDEVIEKIKAGIPVILRISGYCLNTKDL NEEQKMELCQRMFHEKLIG" misc_feature 1991056..1993308 /gene="pflA" /locus_tag="lmo1917" /note="Pyruvate formate lyase 1; Region: PFL1; cd01678" /db_xref="CDD:153087" misc_feature order(1991374..1991379,1991461..1991466,1991473..1991478, 1991482..1991484,1991497..1991499,1991506..1991511) /gene="pflA" /locus_tag="lmo1917" /note="coenzyme A binding site [chemical binding]; other site" /db_xref="CDD:153087" misc_feature order(1991554..1991556,1991824..1991829,1991989..1991991, 1992007..1992009,1992262..1992264,1992328..1992330, 1992337..1992339,1992844..1992846,1992850..1992852) /gene="pflA" /locus_tag="lmo1917" /note="active site" /db_xref="CDD:153087" misc_feature order(1992262..1992267,1993240..1993242) /gene="pflA" /locus_tag="lmo1917" /note="catalytic residues [active]" /db_xref="CDD:153087" misc_feature 1993231..1993245 /gene="pflA" /locus_tag="lmo1917" /note="glycine loop [active]" /db_xref="CDD:153087" regulatory 1993337..1993367 /regulatory_class="terminator" regulatory complement(1993337..1993367) /regulatory_class="terminator" gene complement(1993372..1994637) /locus_tag="lmo1918" /db_xref="GeneID:985765" CDS complement(1993372..1994637) /locus_tag="lmo1918" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465442.1" /db_xref="GeneID:985765" /translation="MDYDVIVIGGGPSGLMAAISAAEKNKRVLLIEKGPKLGRKLIMS GGGRCNVTNRRPAEEIIKHIPGNGRFLYSAFHAFDNEDIIRFFERLGVALKEEDHGRM FPVSNSARSVAEAMIQRMEKLGVKIYMQTAVKQVDYEDGHVKGVTLKDGQEISASAVI VAVGGKSVPRTGSTGDGYAWAKKAGHTITELYPTEVPITSSEPFIKQKVLQGTSLRDV SLSVLNAKGKPIITHQMDMIFTHFGVSGPAALRCSMFVLRELKKTGAGTVKMRLDLFP NVSAAELSKDVYKLLEENPKKALKNSLSSLLQEKMLLFLLEKADLEETAEYKQVSPKK IEQFIQLLKDFTFEVNGTLDFEKAFVTGGGVSVKEIKPKEMQSKLMEGLFFCGEILDI NGYTGGYNITCALVTGHTAGAYAAEVSNA" misc_feature complement(1993396..1994631) /locus_tag="lmo1918" /note="HI0933-like protein; Region: HI0933_like; pfam03486" /db_xref="CDD:427330" regulatory complement(1994644..1994649) /regulatory_class="ribosome_binding_site" regulatory complement(1994718..1994735) /regulatory_class="terminator" gene complement(1994751..1995434) /locus_tag="lmo1919" /db_xref="GeneID:985763" CDS complement(1994751..1995434) /locus_tag="lmo1919" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465443.1" /db_xref="GeneID:985763" /translation="MSFSQYIIYFIIVAAIPLWAQYRVKTTYAHYSKVGVANGLTGAE VARHILDTNGLTNVPVHETNGMLSDHYDPRKKAVFLSEANFRGRSIAGAAVAAHEVGH AIQDQQDYAFMRFRSALVPVTMFSSNISWVFLIIGMLANVASFMLLGIILMAIGVLFQ LITLPVEFDASKRALVQLESGGLVAPSELPQAKKVLSAAAMTYVAAMAVAVLELLRLL LIFTNMNRN" misc_feature complement(1994757..1995434) /locus_tag="lmo1919" /note="Zn-dependent membrane protease YugP [Posttranslational modification, protein turnover, chaperones]; Region: YugP; COG2738" /db_xref="CDD:442040" regulatory complement(1995443..1995448) /regulatory_class="ribosome_binding_site" gene complement(1995520..1996116) /locus_tag="lmo1920" /db_xref="GeneID:985761" CDS complement(1995520..1996116) /locus_tag="lmo1920" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465444.1" /db_xref="GeneID:985761" /translation="MLYSLLANRAFLRLLFFGNLLGAIYGYIWYLPQLQMTEPRFWLF VPDSPTAILFFTLALVAFLGKKHWPLMEALGFVCLVKYGLWAVGMNIFYMVDQGVLVW GSVVLILTHGFMAVEGILYAPFYRFRIGHFMIAAVWVFHNDVIDYVFGQMPIYMGLEK YLPEIGYATFWLTVLVLWFVYDKTIKNKHLTLEFPHDE" misc_feature complement(1995553..1996116) /locus_tag="lmo1920" /note="Uncharacterized membrane protein YpjA [Function unknown]; Region: YpjA; COG4347" /db_xref="CDD:443488" regulatory complement(1996126..1996131) /regulatory_class="ribosome_binding_site" gene complement(1996204..1996749) /locus_tag="lmo1921" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985800" CDS complement(1996204..1996749) /locus_tag="lmo1921" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465445.1" /db_xref="GeneID:985800" /translation="MKASISIDEKKDFIRWFLNKHQMKTREAMWVLNYIAGHDQIVKY VHFVDNLEGCARGLSLSAHGVESEPFLFFKGNIMTTDPEKAFHDIRLNWDEELYVELH FEEAMSSPEYALVREDNPFAAVKLADEEKEMADALIYQSVHQFSREKVLQQIDEALDT RDEAAFHKLVRILQQMDTEKE" misc_feature complement(1996213..1996743) /locus_tag="lmo1921" /note="hypothetical protein; Provisional; Region: PRK03636" /db_xref="CDD:235145" regulatory complement(1996754..1996759) /regulatory_class="ribosome_binding_site" gene complement(1996784..1998037) /locus_tag="lmo1922" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985760" CDS complement(1996784..1998037) /locus_tag="lmo1922" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465446.1" /db_xref="GeneID:985760" /translation="MELANKMLHALEHEDMALAKKYFDEVVQAGTDEEQYYLAEELFT LGFLDETEDLYELLLAKYKDEGELLVRAAEVALEKDDIDSAQDYLEKVNKEDEAYIES LLVLADLYQMQGLFEVSEQKLLEAKQIAPNEPIIDFALGEYYLSQARFASAVQSYQTA VEAGLTIISNGAVSVYERIAEAFAASGAFEEALSYYERALEDKESIDTLFGMGLTAYQ AKDYTKAIHALEHLREHDPSYTTLYSYLAKSYEENGEPEKAIAVLKDGLMQDEFNKEM FLEAGKLAVKLRLPEEAEEFYRQAIVLDEEYSEAIMQLNKLLIAQENYEGVIELVEGL GEEVISEPQIFWDVSVAYQETEQYNKAKANYELAYSHFTNNPTFLKEYGLFLREEGEH AKSQEVLRNYLELEPEDTEILSLFD" misc_feature complement(1997639..1998034) /locus_tag="lmo1922" /note="Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: BepA; COG4783" /db_xref="CDD:443813" misc_feature complement(1997858..1997941) /locus_tag="lmo1922" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(1997756..1997839) /locus_tag="lmo1922" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(1997042..1997824) /locus_tag="lmo1922" /note="Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis]; Region: LapB; COG2956" /db_xref="CDD:442196" misc_feature complement(1997654..1997740) /locus_tag="lmo1922" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(1997534..1997641) /locus_tag="lmo1922" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(1997435..1997515) /locus_tag="lmo1922" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(order(1997282..1997284,1997291..1997296, 1997303..1997308,1997315..1997317,1997384..1997389, 1997393..1997398,1997405..1997410,1997417..1997419, 1997486..1997488,1997492..1997497,1997504..1997509)) /locus_tag="lmo1922" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature complement(1997333..1997425) /locus_tag="lmo1922" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(1997237..1997320) /locus_tag="lmo1922" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(1997135..1997218) /locus_tag="lmo1922" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(1996811..1997206) /locus_tag="lmo1922" /note="Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: BepA; COG4783" /db_xref="CDD:443813" regulatory complement(1998045..1998050) /regulatory_class="ribosome_binding_site" gene complement(1998168..1999454) /gene="aroE" /locus_tag="lmo1923" /db_xref="GeneID:985759" CDS complement(1998168..1999454) /gene="aroE" /locus_tag="lmo1923" /EC_number="2.5.1.19" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis" /codon_start=1 /transl_table=11 /product="3-phosphoshikimate 1-carboxyvinyltransferase" /protein_id="NP_465447.1" /db_xref="GeneID:985759" /translation="MKLITNKQGLVGAITVPGDKSMSHRSIMFGAIAEGKTVIRHFLR ADDCLGTIKAFKALGVKIEETDEEIIVHGTGFDGLKQADGPLDIGNSGTTIRLMMGIL AGRDFDTVILGDESIAKRPMNRVMLPLQQMGAKMHGKDGSEFAPITITGKQSLKRMEY HMPVASAQVKSAIIFAALQAEGETIIHEKEKTRDHTEHMIRQFGGEIEMDGLTIRVKG GQKFTGQEMTVPGDVSSAAFFIVAGLITPGSEIELTHVGLNPTRTGIFDVVKQMGGSL VVKDSSRSTGKLAGTVVVKTSKLKGTEIDGDIIPRLIDEIPVIALLATQAEGTTIIKD AAELKVKETNRIDAVATELNKMGADITPTEDGLIIHGKTPLHAANVTSYGDHRIGMML QIAALLVEEGDVELERPEAVSVSYPTFFEDIRSLLK" misc_feature complement(1998171..1999454) /gene="aroE" /locus_tag="lmo1923" /note="3-phosphoshikimate 1-carboxyvinyltransferase; Provisional; Region: PRK02427" /db_xref="CDD:235037" regulatory complement(1999464..1999469) /regulatory_class="ribosome_binding_site" gene complement(1999468..2000571) /gene="tyrA" /locus_tag="lmo1924" /db_xref="GeneID:985915" CDS complement(1999468..2000571) /gene="tyrA" /locus_tag="lmo1924" /EC_number="1.3.1.12" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate" /codon_start=1 /transl_table=11 /product="prephenate dehydrogenase" /protein_id="NP_465448.1" /db_xref="GeneID:985915" /translation="MKGTIVIVGLGLIGGSIALAIKAKHPEAHIIGIDVSYHSLEVGK SLGVIDEIGESILIDGPKADLLIFCCPVKETEQLLMRLPGLRLKENVIVTDTGSTKGT IMEASTALRESGITFIGGHPMAGSHKSGVRAAKELLFENAYYLLTPTKDVTEDNVTDL KTWLSGTNAKFLVLSPNEHDEITGMLSHLPHIVAAALVNQTQSFTEEHPAAFRLAAGG FRDITRVASSDPRMWTDISISNKKTLTKQLTIWRDSMNQALEMLESEDATSIYAFFDG AKEFRDSLPVHQGGAIPSFYDLFVDVPDYPGVISEVTRYLGEEEISLTNIKILETRED IFGVLQITFQSDEDRDRAKRCIETRSNYTCHYE" misc_feature complement(1999480..2000565) /gene="tyrA" /locus_tag="lmo1924" /note="prephenate dehydrogenase; Validated; Region: PRK06545" /db_xref="CDD:235824" regulatory complement(2000581..2000586) /regulatory_class="ribosome_binding_site" gene complement(2000592..2001674) /gene="hisC" /locus_tag="lmo1925" /db_xref="GeneID:985756" CDS complement(2000592..2001674) /gene="hisC" /locus_tag="lmo1925" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis" /codon_start=1 /transl_table=11 /product="histidinol-phosphate aminotransferase" /protein_id="NP_465449.1" /db_xref="GeneID:985756" /translation="MKWKKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTS PKVAALQANSNVETEIYPDGWASSLRKEVTNFYQLEEEELIFTAGVDELIELLTRVLL DTTKNTVMATPTFVQYRQNALIEGAEVREIPLLTDGAHDLEGMLNAIDEKTTIVWICN PNNPTGNYIDLADIQAFLDKVPSDILVVLDEAYIEYVTPQPKKHEKLIRTYKNLIITR TFSKIYGLASARVGYGIADKEIINQLNIVRPPFNTTSIGQKLAIEAIKDQAFIEACRI SNANGIKQYEAFAKRFEQVKLYPANGNFVLIDLGIEARTIFSYLEKNGYITRSGAALG FPTAVRITIGKEEENSAVIALLEKLL" misc_feature complement(2000598..2001638) /gene="hisC" /locus_tag="lmo1925" /note="Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid transport and metabolism]; Region: HisC; COG0079" /db_xref="CDD:439849" gene complement(2001674..2002048) /locus_tag="lmo1926" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985757" CDS complement(2001674..2002048) /locus_tag="lmo1926" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="chorismate mutase" /protein_id="NP_465450.1" /db_xref="GeneID:985757" /translation="MRAIRGATTIETNIPEEIYAATKELFEEILTQNEVTNSEQLTSV IITVTEDISAAFPAKAVRETPGFELVPVMGMQEIPVPNSLPMCIRFMVFTDLHKPLGA INHVYLRGAKVLRPDLVKEGDA" misc_feature complement(2001695..2002048) /locus_tag="lmo1926" /note="monofunctional chorismate mutase, gram positive type, clade 1; Region: CM_mono_aroH; TIGR01796" /db_xref="CDD:130855" misc_feature complement(order(2001770..2001772,2001806..2001823, 2001827..2001829,2001833..2001838,2001863..2001865, 2001878..2001883,2001890..2001895,2001920..2001928, 2002034..2002036,2002040..2002048)) /locus_tag="lmo1926" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100026" misc_feature complement(order(2001707..2001709,2001728..2001730, 2001779..2001784,2001797..2001799,2001815..2001820, 2001827..2001832,2001863..2001865,2001872..2001874, 2001881..2001883,2002034..2002036)) /locus_tag="lmo1926" /note="active site" /db_xref="CDD:100026" regulatory complement(2001682..2001687) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1926" gene complement(2002045..2003142) /gene="aroB" /locus_tag="lmo1927" /db_xref="GeneID:985753" CDS complement(2002045..2003142) /gene="aroB" /locus_tag="lmo1927" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis" /codon_start=1 /transl_table=11 /product="3-dehydroquinate synthase" /protein_id="NP_465451.1" /db_xref="GeneID:985753" /translation="MPEITVRAKSKTYPVYINEFALEDIREKWTKSLAKFSHVFVLTD GHVAELHKAKLDAVLADLPVVTYYVAPNGEEAKTFRVYEDVMTKMIETGLDRKAVLIA FGGGVIGDLGGFVAATYMRGIPFYQVPTTVLAHDSAVGGKVAINHPLGKNMIGNFYQP EAVIYDTQFFATLPERELRSGFAEMIKHALISDLTLLRALMDTFTEPKDFYTKDLTPF LQRGIEIKANIVAQDETEQGVRAYLNFGHTFGHALEAYGNFGKWLHGEAITYGMIYAL TMSETIYGLDFDLAEFKTWLEQLGYDTTFDASVPFSKILENMRHDKKTTFNEISMVLL EEIGKPVIFKADDDLIFETYKRVMRKGGNVI" misc_feature complement(2002081..2003142) /gene="aroB" /locus_tag="lmo1927" /note="3-dehydroquinate synthetase [Amino acid transport and metabolism]; Region: AroB; COG0337" /db_xref="CDD:440106" regulatory complement(2002058..2002063) /regulatory_class="ribosome_binding_site" /gene="aroB" /locus_tag="lmo1927" gene complement(2003145..2004311) /gene="aroF" /locus_tag="lmo1928" /db_xref="GeneID:985751" CDS complement(2003145..2004311) /gene="aroF" /locus_tag="lmo1928" /EC_number="4.2.3.5" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis" /codon_start=1 /transl_table=11 /product="chorismate synthase" /protein_id="NP_465452.1" /db_xref="GeneID:985751" /translation="MRYLTAGESHGPGLTTIIEGLPAGMPLLAEDVNKELKRRQGGHG RGARMRIEKDQVQITAGIRHGKTLGAPVAMFVENKDWKHWETVMSIEPVPEKNEKSRR VSRPRPGHADLVGGMKYGHNDMRNVLERSSARETTVRVAAGAVAKKLLHELGIEVAGH VLEIGGTRANLTRDYAVAEIQETSEASPVRCLDGVAAEEMMQKIDDAKKNGDTIGGIV EVVVGGVPAGLGSYVQWDKKLDAKIARAIVSINAFKGAEFGVGFEAARKPGSEVMDEI LWSKEDGYTRRTNNLGGFEGGMTNGMPIVVRGVMKPIPTLYKPLQSVDIDSKETFNAS VERSDSCAVPAASVVAEAVVAWEVAVAVLEKFDGDRFDTLKKHVEEHRNLTKEF" misc_feature complement(2003289..2004311) /gene="aroF" /locus_tag="lmo1928" /note="chorismate synthase; Validated; Region: PRK05382" /db_xref="CDD:235438" misc_feature complement(order(2003367..2003369,2003376..2003387, 2003391..2003393,2003412..2003420,2003424..2003432, 2003439..2003441,2003502..2003507,2003517..2003522, 2003526..2003531,2003538..2003552,2003559..2003561, 2003565..2003570,2003574..2003582,2003589..2003594, 2003598..2003600,2003616..2003624,2003628..2003630, 2003661..2003678,2003691..2003693,2003895..2003897, 2003919..2003924,2003955..2003969,2004087..2004089, 2004093..2004095,2004099..2004101,2004105..2004110, 2004129..2004134,2004138..2004143,2004240..2004245, 2004255..2004257,2004261..2004263,2004267..2004269, 2004288..2004308)) /gene="aroF" /locus_tag="lmo1928" /note="Tetramer interface [polypeptide binding]; other site" /db_xref="CDD:143612" misc_feature complement(order(2003367..2003375,2003379..2003384, 2003556..2003561,2003901..2003903,2003910..2003921, 2003982..2003987,2004195..2004197,2004282..2004284)) /gene="aroF" /locus_tag="lmo1928" /note="active site" /db_xref="CDD:143612" misc_feature complement(order(2003295..2003297,2003367..2003375, 2003379..2003381,2003556..2003564,2003916..2003918, 2003922..2003924,2003979..2003987)) /gene="aroF" /locus_tag="lmo1928" /note="FMN-binding site [chemical binding]; other site" /db_xref="CDD:143612" regulatory complement(2003150..2003155) /regulatory_class="ribosome_binding_site" /gene="aroF" /locus_tag="lmo1928" regulatory complement(2004321..2004326) /regulatory_class="ribosome_binding_site" regulatory complement(2004484..2004505) /regulatory_class="terminator" gene complement(2004515..2004958) /gene="ndk" /locus_tag="lmo1929" /db_xref="GeneID:984899" CDS complement(2004515..2004958) /gene="ndk" /locus_tag="lmo1929" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate" /codon_start=1 /transl_table=11 /product="nucleoside diphosphate kinase" /protein_id="NP_465453.1" /db_xref="GeneID:984899" /translation="MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDREL AEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIR ADYAIHTNRNVIHGSDSPESAQREIQLFFAPDEILSYQKAVDTWI" misc_feature complement(2004542..2004958) /gene="ndk" /locus_tag="lmo1929" /note="Nucleoside diphosphate kinase [Nucleotide transport and metabolism]; Region: Ndk; COG0105" /db_xref="CDD:439875" regulatory complement(2004966..2004971) /regulatory_class="ribosome_binding_site" gene complement(2004977..2005942) /locus_tag="lmo1930" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987985" CDS complement(2004977..2005942) /locus_tag="lmo1930" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="heptaprenyl diphosphate synthase subunit II" /protein_id="NP_465454.1" /db_xref="GeneID:987985" /translation="MKLNFLYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEAG GKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIK SKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQ SVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDF VGTEKELGKPAGEDLRQGNVTLPVFFAMEDPFLKKRISQITEETPAEEIAVLVEEVKK TGAKQAEDVATTYLKKAVEILDSLPQVPELKPLKQIVRVLDKRNY" misc_feature complement(2004980..2005939) /locus_tag="lmo1930" /note="Isoprenoid Biosynthesis enzymes, Class 1; Region: Isoprenoid_Biosyn_C1; cl00210" /db_xref="CDD:469660" misc_feature complement(order(2005226..2005240,2005247..2005264, 2005280..2005285,2005625..2005660)) /locus_tag="lmo1930" /note="active site lid residues [active]" /db_xref="CDD:173833" misc_feature complement(order(2005232..2005234,2005247..2005249, 2005262..2005264,2005292..2005294,2005301..2005306)) /locus_tag="lmo1930" /note="aspartate-rich region 2; other site" /db_xref="CDD:173833" regulatory complement(2005948..2005953) /regulatory_class="ribosome_binding_site" gene complement(2005953..2006666) /gene="ubiE" /locus_tag="lmo1931" /db_xref="GeneID:987989" CDS complement(2005953..2006666) /gene="ubiE" /locus_tag="lmo1931" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone" /codon_start=1 /transl_table=11 /product="ubiquinone/menaquinone biosynthesis methyltransferase" /protein_id="NP_465455.1" /db_xref="GeneID:987989" /translation="MTETKEEKVHKVFEKISPSYDRMNSVISFKLHVKWRKETMKLMR VQKGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEADLHNVEL IHGNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGGQLACIDTSQPNIP GWKQVFNAYFRYVMPVFGKFFAKSYKEYSWLQESTREFPGMARLAEMFQEAGFSYVRY ISHSGGASATHFGFKKKEQ" misc_feature complement(2005968..2006660) /gene="ubiE" /locus_tag="lmo1931" /note="demethylmenaquinone methyltransferase; Region: MenG_heptapren; TIGR02752" /db_xref="CDD:131799" misc_feature complement(order(2006301..2006303,2006346..2006354, 2006427..2006432,2006487..2006507)) /gene="ubiE" /locus_tag="lmo1931" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" regulatory complement(2006675..2006680) /regulatory_class="ribosome_binding_site" gene complement(2006689..2007456) /locus_tag="lmo1932" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987988" CDS complement(2006689..2007456) /locus_tag="lmo1932" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="heptaprenyl diphosphate synthase subunit I" /protein_id="NP_465456.1" /db_xref="GeneID:987988" /translation="MTYQAREAGLKEVEQLVHEQAVYQYLQENNEGGQMDKDQMLFLH EAISGSDLTDAAAYRVVSATLYMILAHDTHEKIDEPGDVVKLTRKEQELTVLAGDFYS ALYYRTLAELEMIPLLRALQSGVQETNTAKTNIYQLHVATDEEYLSQLTLTNAAIFAK FAKYFMKDETFIALGCQFFLLKRLQTELATYKEIGASRLKRAFDHGYFAKEAVSNFES WLVAIIRDVKSEVERLKTEAEPLSNLLEKRIIEVIND" misc_feature complement(2006752..2007390) /locus_tag="lmo1932" /note="Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1; Region: HEPPP_synt_1; pfam07307" /db_xref="CDD:399944" regulatory complement(2007464..2007469) /regulatory_class="ribosome_binding_site" gene complement(2007515..2008084) /gene="folE" /locus_tag="lmo1933" /db_xref="GeneID:987987" CDS complement(2007515..2008084) /gene="folE" /locus_tag="lmo1933" /EC_number="3.5.4.16" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase I" /protein_id="NP_465457.1" /db_xref="GeneID:987987" /translation="MEQIDKQKIADAVKVILEAVGENPDREGLIDTPMRVARMYEEVF AGLKKDPSVHFDTIFEEQHEELVLVKDIRFSSMCEHHLVPFFGVAHVAYLPQNGRVAG LSKLARVVDDVSRRPQLQERITTTVAEIMMEKLKPLGVMVIMEAEHMCMTIRGVNKPG TKTITSAVRGAFKNDDKLRSEVLALIKHN" misc_feature complement(2007521..2008081) /gene="folE" /locus_tag="lmo1933" /note="GTP cyclohydrolase I [Coenzyme transport and metabolism]; Region: FolE; COG0302" /db_xref="CDD:440071" regulatory complement(2008092..2008097) /regulatory_class="ribosome_binding_site" regulatory complement(2008256..2008292) /regulatory_class="terminator" gene complement(2008319..2008594) /gene="hup" /locus_tag="lmo1934" /db_xref="GeneID:987986" CDS complement(2008319..2008594) /gene="hup" /locus_tag="lmo1934" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA-binding protein HU" /protein_id="NP_465458.1" /db_xref="GeneID:987986" /translation="MANKTDLVNSVAELADLSKKDAAKAVEAVFETIQTSLSKGEKVQ LIGFGNFEVRERAARKGRNPRTKEEIDIPASKVPAFKPGKALKEAVK" misc_feature complement(2008331..2008588) /gene="hup" /locus_tag="lmo1934" /note="histone-like DNA-binding protein HU; Region: HU; cd13831" /db_xref="CDD:259853" misc_feature complement(order(2008334..2008339,2008349..2008351, 2008355..2008357,2008361..2008369,2008451..2008453, 2008460..2008474,2008484..2008489,2008493..2008501, 2008505..2008513,2008517..2008528,2008553..2008555, 2008562..2008567,2008574..2008576)) /gene="hup" /locus_tag="lmo1934" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:259853" misc_feature complement(order(2008379..2008381,2008385..2008390, 2008403..2008414,2008418..2008420,2008424..2008429, 2008433..2008435)) /gene="hup" /locus_tag="lmo1934" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:259853" regulatory complement(2008605..2008610) /regulatory_class="ribosome_binding_site" gene complement(2009006..2009986) /locus_tag="lmo1935" /db_xref="GeneID:984896" CDS complement(2009006..2009986) /locus_tag="lmo1935" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="protein-tyrosine/serine phosphatase" /protein_id="NP_465459.1" /db_xref="GeneID:984896" /translation="MEVTRTDKAVTLTWNKEEVSEGTVVFVSSSPKLEANSEPVFKVT NDVDHYSYDTKDIPIYFFLETPNGDKAIVSERILPLESVFNFRDMGGYASKNGKHVKW GKLYRSSNLVNINENDAALLQKLHIKWICDLRSSSEVKAQPTPAIEGILNKHIPIGTA KNEETKLPVTNDTTIYEPLMGESYRVFVQSVEGFREIFTEVLEDAKAGLPFVFHCTAG KDRTGVLGALLLTLLDVPEKTIFDDYAITNRYQDDILQEMGGIVSLFSSGTEKIDLET FRPMAEARPEYLEIAFDEMKKQYGSVANYLEKGIGITATEKAAFQKEMLE" misc_feature complement(2009009..2009752) /locus_tag="lmo1935" /note="Protein tyrosine/serine phosphatase Oca4 [Signal transduction mechanisms]; Region: Oca4; COG2365" /db_xref="CDD:441932" regulatory complement(2009995..2010000) /regulatory_class="ribosome_binding_site" regulatory complement(2010050..2010082) /regulatory_class="terminator" gene complement(2010089..2011105) /gene="gpsA" /locus_tag="lmo1936" /db_xref="GeneID:985475" CDS complement(2010089..2011105) /gene="gpsA" /locus_tag="lmo1936" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate" /codon_start=1 /transl_table=11 /product="NAD(P)H-dependent glycerol-3-phosphate dehydrogenase" /protein_id="NP_465460.1" /db_xref="GeneID:985475" /translation="MTQKKVAILGAGSWGTGLALVLADNNHKPVIWGNLDKIVNEINE SHTNSHYLPDIILPTEVKATLSLDEAIDGAEIVVIAIPTNAMRIVCKQLNEALKEPTI LVHVSKGIEPETNLRMSEVIEEEIDAAKRKALVVLSGPSHAEEVALRHPTTLCASCKD LSAAEIVQDRFINNNLRIYTNDDVIGAEIGGALKNIIALGAGISDGLGYGDNAKAALM TRGMAEITRLGVAVGSNPQTFYGLTGIGDLIVTCTSVHSRNWRAGNMLGKGENLDEVL EKMGMVVEGVRTAKAVHGWAKKLDIDMPITESIYAILFENKDAREAVDLLMGREKKIE KESF" misc_feature complement(2010110..2011096) /gene="gpsA" /locus_tag="lmo1936" /note="Glycerol-3-phosphate dehydrogenase [Energy production and conversion]; Region: GpsA; COG0240" /db_xref="CDD:440010" regulatory complement(2011115..2011120) /regulatory_class="ribosome_binding_site" gene complement(2011128..2012438) /gene="engA" /locus_tag="lmo1937" /gene_synonym="yfgK; yphC" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986528" CDS complement(2011128..2012438) /gene="engA" /locus_tag="lmo1937" /gene_synonym="yfgK; yphC" /experiment="EXISTENCE:[PMID:19448609]" /note="EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains" /codon_start=1 /transl_table=11 /product="GTP-binding protein EngA" /protein_id="NP_465461.1" /db_xref="GeneID:986528" /translation="MAKPVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYN SAEWLGKEFNIIDTGGIDLSDEPFLEQIRAQAEIAIDEADVIIFITNGREGVTDADEQ VAKILYRSNKPIVLAINKVDNPEMRDQIYDFYSLGFGEPYPISGSHGLGLGDMLDAVR AHFPKEEEEEYPDDTVKFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTY TFDGQDYVMIDTAGMRKRGKVYESTEKYSVLRAMRAIERSDVVLVVINAEEGIREQDK RIAGYAHDAGRAIIIVVNKWDAINKDEKTINVWTEDIREQFQFLSYAPIVFVSAKTKQ RLNNLFPLINQVSDNHSLRVQSSMLNDVISDAVAMNPSPMDKGKRLKIFYTTQVAVKP PTFVVFVNDPELMHFSYERFLENRIREAFPFEGTPIRVIARKRK" misc_feature complement(2011131..2012432) /gene="engA" /locus_tag="lmo1937" /gene_synonym="yfgK; yphC" /note="Double Era-like domain GTPase Der [Translation, ribosomal structure and biogenesis]; Region: Der; COG1160" /db_xref="CDD:440774" regulatory complement(2012446..2012451) /regulatory_class="ribosome_binding_site" regulatory complement(2012541..2012569) /regulatory_class="terminator" gene complement(2012582..2013727) /gene="rpsA" /locus_tag="lmo1938" /db_xref="GeneID:987984" CDS complement(2012582..2013727) /gene="rpsA" /locus_tag="lmo1938" /experiment="EXISTENCE:[PMID:19448609]" /note="in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S1" /protein_id="NP_465462.1" /db_xref="GeneID:987984" /translation="MSEDLFDVEVRNFEEGDKVTGTVTSVEDKQVYVGIPGSKLDGVV PISELSNIHVETASDVVSVGDTLDLIVTKVEDDILVLSKRKVDAEKASDDIKAKFESG EVFEAVVSDVVKGGLVVDLGVRAFVPASLVEDHFVEDFADYKGTTLTFKVVEFEPENN RVILSHRAVVETEKASQKQALLSEIKEGDVIEGTVQRLANFGAFVDIGGVDGLVHISQ ISYKHIATPQEVLEEGQKVTVKVIGIDPENERISLSIKATLPGPWDGITEKAQVGSVL EGKVVRLVTFGAFVEIFPGVEGLVHISQISHEHIGTPQEVLSEGQTVEVKVLEVNEAD KRLSLSIKELQDAPVEEADYELPEENTGFQMSDLIGDKLKGLQNDDK" misc_feature complement(2012597..2013727) /gene="rpsA" /locus_tag="lmo1938" /note="30S ribosomal protein S1; Reviewed; Region: rpsA; PRK06676" /db_xref="CDD:235851" regulatory complement(2013735..2013740) /regulatory_class="ribosome_binding_site" regulatory complement(2014043..2014078) /regulatory_class="terminator" gene complement(2014086..2014760) /gene="cmk" /locus_tag="lmo1939" /db_xref="GeneID:984888" CDS complement(2014086..2014760) /gene="cmk" /locus_tag="lmo1939" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the formation of (d)CDP from ATP and (d)CMP" /codon_start=1 /transl_table=11 /product="cytidylate kinase" /protein_id="NP_465463.1" /db_xref="GeneID:984888" /translation="MTKKICIAIDGPAAAGKSTVAKIVAKKLRFVYIDTGAMYRAVTY IALKNNIAYEDEKAIAALLQKTVIRFEPGEVQQVFVGSENVTEVIRSIEVTNHVSIVA AHPSIREALQERQQVFATEGGIVMDGRDIGTAVLPNAELKIFLLASVEERAERRYKEN MAKGFTGDLDQLKKEIEERDHLDYTRTHSPLKKADDAIEVDTTSMSIDQVANKILSLA ELKINN" misc_feature complement(2014092..2014748) /gene="cmk" /locus_tag="lmo1939" /note="Cytidylate kinase [Nucleotide transport and metabolism]; Region: Cmk; COG0283" /db_xref="CDD:440052" regulatory complement(2014769..2014774) /regulatory_class="ribosome_binding_site" gene complement(2014776..2015738) /locus_tag="lmo1940" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987982" CDS complement(2014776..2015738) /locus_tag="lmo1940" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="asparaginase" /protein_id="NP_465464.1" /db_xref="GeneID:987982" /translation="MAKVALITTGGTIASKKTASGKLASGELSGEELAALCQLPTEIQ IDIYSTFQLPSMHITLPDLISLKQLIESIFMDETYDGIVVTHGTDSLEETAYFLDLAV TDARPIVVTGSQRAPEEPGTDAYVNIRHAIYTACEINLRQAGTVVVFNERIFAARYVK KVHASNIQGFSAFGFGYLGIIDNDQVFLYQKPLEHECFDIRLDLPEVVVIKCYIGADG LFIDAAIDSGVSGIVLEGVGRGQVAPKMMPAIIRALDAGIPVVITTSAEEGNVYTTYD YEGSTFDLYNRGVILGKDYDSKKARMKLMVLLASQEEINQTNFR" misc_feature complement(2014809..2015732) /locus_tag="lmo1940" /note="Type II (periplasmic) bacterial L-asparaginase; Region: L-asparaginase_II; cd08964" /db_xref="CDD:199208" misc_feature complement(order(2015016..2015018,2015256..2015258, 2015400..2015402,2015472..2015480,2015571..2015579, 2015703..2015708)) /locus_tag="lmo1940" /note="active site" /db_xref="CDD:199208" misc_feature complement(order(2014920..2014925,2014944..2014949, 2015010..2015012,2015016..2015018,2015022..2015030, 2015052..2015054,2015058..2015060,2015082..2015084, 2015088..2015090,2015100..2015102,2015106..2015108, 2015112..2015114,2015157..2015162,2015166..2015174, 2015178..2015180,2015193..2015195,2015199..2015201, 2015205..2015213,2015241..2015243,2015247..2015258, 2015268..2015270,2015274..2015276,2015286..2015291, 2015361..2015366,2015373..2015381,2015394..2015396, 2015460..2015462,2015472..2015474,2015550..2015552, 2015559..2015573,2015703..2015705)) /locus_tag="lmo1940" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:199208" misc_feature complement(order(2014836..2014838,2014845..2014850, 2014929..2014934,2014941..2014949,2015010..2015018, 2015022..2015030,2015052..2015054,2015058..2015060, 2015067..2015072,2015079..2015084,2015088..2015090, 2015100..2015102,2015106..2015108,2015112..2015120, 2015244..2015258,2015457..2015465,2015469..2015474, 2015550..2015552,2015559..2015573)) /locus_tag="lmo1940" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:199208" regulatory complement(2015747..2015752) /regulatory_class="ribosome_binding_site" gene complement(2015819..2016538) /locus_tag="lmo1941" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987990" CDS complement(2015819..2016538) /locus_tag="lmo1941" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465465.1" /db_xref="GeneID:987990" /translation="MVKTRKEKREYEEPADYDMSSEGQDEFNNEPPMLSRSDSRRGKK KTIFRYPLLNLLIVFFLLIPIVIVIVFVTVQNMGSSNEVKTETESTVNVSDNTQSKEE KEKAKKAAEEKAAAEKAAEEKKAAAEKAEADKKKQEEDAVKAANAKKEQEAAEEKAAA DKAAAEKAAAEKAEQQKANEASQQKAGGSHTVKAGDTLYSIARSTYGQAGAAAGVEKI KQANGLGSDNVPVGTVLTIPQ" misc_feature complement(2015825..2015971) /locus_tag="lmo1941" /note="LysM domain; Region: LysM; pfam01476" /db_xref="CDD:396179" regulatory complement(2016547..2016552) /regulatory_class="ribosome_binding_site" gene complement(2016858..2018261) /gene="recS" /locus_tag="lmo1942" /db_xref="GeneID:987981" CDS complement(2016858..2018261) /gene="recS" /locus_tag="lmo1942" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase" /protein_id="NP_465466.1" /db_xref="GeneID:987981" /translation="MNLEKELKEYLGFDEFRPGQKEVIETALAKQNCFAMLPTGTGKT ICYQLAGHLMDGLVLIVSPLLSLMQDQMERMRAHGEKRVAALNSFLKREEKGQILASI HSYKFIFLSPEMLNNETVKNLLLKQKISLFVIDEAHCISQWGHDFRPDYLMLGRFIQE AKFPVTMVLTATATKKVRADILTQLHLTDCAQIVYSVNRPNISLQVEKFSNQHVKKDR LYELVRKLQTPGIIYFSSKKLAESTAHELSEIAELRVAYYHGDMDTEDRIIIQQQFVY GQLDVICATSAFGMGIDKADIRYVIHYHMPADLEAYLQEIGRAGRDGEDSVAILLYAN GDEFIQMQLADQDIPDANLMNLTTEQRKTLPETEQRFIDYYQRSGLSTKELTDKMDYR KKWKRANLQQFIGYLHTTDCRRNYILRYFEEAPLEVTPENCCDLDGAEIINFEKRAKI KQKEIPTWEAYLAYLLQ" misc_feature complement(2016957..2018258) /gene="recS" /locus_tag="lmo1942" /note="Superfamily II DNA helicase RecQ [Replication, recombination and repair]; Region: RecQ; COG0514" /db_xref="CDD:440280" gene complement(2018258..2019265) /locus_tag="lmo1943" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984735" CDS complement(2018258..2019265) /locus_tag="lmo1943" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465467.1" /db_xref="GeneID:984735" /translation="MDKLDNYIVTILEKSITPRKLPFLHTVLAGRRTGQAVQDIHLFQ MQHLFGLVPNLKANYLEKRLLELVHQGSIISTENGYVTQGQLVATFENDYPNFQGFTF QRQAFAFFSHLRLAVQVVSNIHHHESYYLPVIRDKKAQQFIKHWLKYQDKTNLADKLY GELFAWMNKLAVARPAFLVERFSGGELMGYTTEQIASKYQVEKWDVYFEVLHEVHRLL TEMKKKPEEWPILASLVPDELNGLTSSAMQTYVLWQNGADLEAIERIRNLKKSTIHDH FVEIRATLKEANVPYLPEEAIIQTIITKKWNLLREIKAEFPDLDYYQIRLAVVSREGE Q" misc_feature complement(2018261..2019262) /locus_tag="lmo1943" /note="Uncharacterized conserved protein YpbB, contains C-terminal HTH domain [Function unknown]; Region: YpbB; COG4955" /db_xref="CDD:443982" regulatory complement(2018269..2018274) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1943" regulatory complement(2019276..2019281) /regulatory_class="ribosome_binding_site" regulatory 2019405..2019410 /regulatory_class="ribosome_binding_site" gene 2019420..2019644 /locus_tag="lmo1944" /db_xref="GeneID:984673" CDS 2019420..2019644 /locus_tag="lmo1944" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ferredoxin" /protein_id="NP_465468.1" /db_xref="GeneID:984673" /translation="MKYCLVEKDTCIACGACSIHAPDVFDYDTEGLAFNILDNNTGTK EIPEDLVEMVIDAEFACPSLSIKVSDSSFH" misc_feature 2019435..2019629 /locus_tag="lmo1944" /note="Ferredoxin [Energy production and conversion]; Region: Fer; COG1141" /db_xref="CDD:440756" regulatory 2019649..2019676 /regulatory_class="terminator" regulatory complement(2019649..2019676) /regulatory_class="terminator" gene complement(2019686..2020297) /locus_tag="lmo1945" /db_xref="GeneID:984894" CDS complement(2019686..2020297) /locus_tag="lmo1945" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465469.1" /db_xref="GeneID:984894" /translation="MKNYSMKVFVSVAVLGTLAFILMMLQFPLLPSAPFLKLDFSDIP ALIGGLLFGPLAVILVELIKNVLLYIVSGSPVGVPVGELANFISGLFYVLPIYYLFHW LRSTKGMVLSTAVGTVLMTGAMAVFNYFVLLPFYIKLGGLPANTDVAWLITYAIVPFN LLKGVIVSAVFLLLYSRLKKWIAKNQTMKERRKFEKRQQEISH" misc_feature complement(2019752..2020285) /locus_tag="lmo1945" /note="Riboflavin transporter FmnP [Coenzyme transport and metabolism]; Region: FmnP; COG3601" /db_xref="CDD:442820" regulatory complement(2020306..2020311) /regulatory_class="ribosome_binding_site" gene 2020487..2020609 /locus_tag="lmos74" /db_xref="GeneID:18245159" misc_RNA 2020487..2020609 /locus_tag="lmos74" /product="FMN" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245159" regulatory complement(2020712..2020727) /regulatory_class="terminator" gene complement(2020738..2021256) /locus_tag="lmo1946" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987980" CDS complement(2020738..2021256) /locus_tag="lmo1946" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acyl-CoA hydrolase" /protein_id="NP_465470.1" /db_xref="GeneID:987980" /translation="MEKRQTKFCKESLVIKTSRVFPSDTNNHNTLFGGRLMTYIDDTA SISASRHCRTEIVTASTDSVDFLKPIKNDHSVCLESYVASTGRSSMEIFVKIIAENLK TGERYLAATSFLTFVALGADGKTVEVPLVEPETEEQKRIHAGAEARSIARKIRLKENQ SLAESLSTDIPW" misc_feature complement(2020789..2021232) /locus_tag="lmo1946" /note="Acyl-CoA hydrolase [Lipid transport and metabolism]; Region: YciA; COG1607" /db_xref="CDD:441215" regulatory complement(2021264..2021269) /regulatory_class="ribosome_binding_site" gene complement(2021272..2023062) /gene="resE" /locus_tag="lmo1947" /db_xref="GeneID:984890" CDS complement(2021272..2023062) /gene="resE" /locus_tag="lmo1947" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component sensor histidine kinas" /protein_id="NP_465471.1" /db_xref="GeneID:984890" /translation="MKIWNSIVGKIWSTIILLLIGILVISGFLVAMIYEKNNITRITN ELEDKTASIITVMQENNEVISAENNNDSALILLDDTMGVIIEQNGKSVYQSQSPDTIS SASANKLIQDKTLDKALEKDNSVTMKYNFKTEKSSLPVEISAQKFKLANGETGVVYVY QSYHDILKVNEKTMSTLIISGIIAIVITSILSFVFSSRMAFPLREMKKIAIAVSKGNF DNRVPTYTHDEIGELGVAFNDMAKQLKYNVSALRQEKEQLSNILVGMADGVIKFSVDK TIILSNPPAEEFLHNWFFSPENTEKVLIPVALNELLNDTLEKKESQVGEITFADHTYV AILTLLYTGEHVRSIVAVIRDMTEEKQLEKMKSDFVNNVSHELRTPISMLQGYSEAII DGVAQSDEEVREFAQIIYDESLRIGRLVNDMLDLARMEAGFNQMDNQKLPLAPLLRKV ISNFDVLAKENFVELGLELETPDLEYSYDPDRMEQVLINLIMNAIRHTGKEGYDGKVI LKQTIDVARSNLVITVSDNGSGIAEEDIPYLFERFYKVDKARKRGKAVGTGIGLAIVK NIVEAHNGKISVESELGKGSDFIITLPLYK" misc_feature complement(2022577..2022951) /gene="resE" /locus_tag="lmo1947" /note="Histidine kinase sensor domain; Region: HisK_sensor; pfam18698" /db_xref="CDD:436672" misc_feature complement(2022331..2022459) /gene="resE" /locus_tag="lmo1947" /note="Histidine kinase, Adenylyl cyclase, Methyl-accepting protein, and Phosphatase (HAMP) domain; Region: HAMP; cd06225" /db_xref="CDD:381743" misc_feature complement(2021275..2022360) /gene="resE" /locus_tag="lmo1947" /note="Sensor histidine kinase WalK [Signal transduction mechanisms]; Region: WalK; COG5002" /db_xref="CDD:444026" regulatory complement(2023072..2023077) /regulatory_class="ribosome_binding_site" gene complement(2023163..2023879) /gene="resD" /locus_tag="lmo1948" /db_xref="GeneID:984889" CDS complement(2023163..2023879) /gene="resD" /locus_tag="lmo1948" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component response regulator ResD" /protein_id="NP_465472.1" /db_xref="GeneID:984889" /translation="MSEQVRVLVVDDEDRIRRLLKMYLERENYRIEEASDGDQALSMA LNNNYEVILLDLMMPGKDGIEVCRELREFKSTPVVMLTAKGEEANRVQGFEVGADDYI VKPFSPREVVLRVKAVLRRAKQSSEESAGGTPGDIITFPHLKIDNEAHRVIVDGKEIG LTPKEYDLLYYLAKSPDKVFDRESLLKEVWRYEFFGDLRTIDTHVKRLREKLHDVSED AARMIVTVWGLGYKFEVPED" misc_feature complement(2023205..2023870) /gene="resD" /locus_tag="lmo1948" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" regulatory complement(2023889..2023894) /regulatory_class="ribosome_binding_site" gene complement(2024062..2024796) /locus_tag="lmo1949" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984426" CDS complement(2024062..2024796) /locus_tag="lmo1949" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465473.1" /db_xref="GeneID:984426" /translation="MERLQKVIANAGITSRRKAEKLIQEGKVTVNGKVVTELGVKVSG TERIEVEGIQLTKEEHRYFLFYKPRGTVSAVTDDKGRTTVADYFADIPERLYPVGRLD YDTSGLLLMTNDGDFANLLMHPKNEVSKTYIARIKGIPEREVIRQLERGVVIDGRKTA PAKVKVRSSDKTKDKAIVEITIHEGRNRQVRKMFEAVGFEVQKLSREEYSFLNLRGLN AGERRELSHHEVKQLKTEARFGKNKK" misc_feature complement(2024119..2024796) /locus_tag="lmo1949" /note="Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605 [Translation, ribosomal structure and biogenesis]; Region: RsuA; COG1187" /db_xref="CDD:440800" gene complement(2024799..2025395) /locus_tag="lmo1950" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985025" CDS complement(2024799..2025395) /locus_tag="lmo1950" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465474.1" /db_xref="GeneID:985025" /translation="MNREEQLGVLESLLFAAGDAGLSTEQLTEVMEITHIEALNLLEL LSERYNESADRGLILLELAGTFQLATKKAHAEFLRKLVEVPSNTVLSQASLETLAIIA YRQPVTRMEVDEVRGVQTDGPIRTLVAKGLVTDKGRVDGAGRAKLYVTTSEFLDAFGL NSLEDLPKLADPATDEPDQNEMDLFFDRFNQSKEQEEE" misc_feature complement(2024847..2025395) /locus_tag="lmo1950" /note="Chromosome segregation and condensation protein ScpB [Transcription]; Region: ScpB; COG1386" /db_xref="CDD:440996" regulatory complement(2024804..2024809) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1950" gene complement(2025392..2026141) /gene="scpA" /locus_tag="lmo1951" /db_xref="GeneID:987973" CDS complement(2025392..2026141) /gene="scpA" /locus_tag="lmo1951" /experiment="EXISTENCE:[PMID:19448609]" /note="functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB" /codon_start=1 /transl_table=11 /product="segregation and condensation protein A" /protein_id="NP_465475.1" /db_xref="GeneID:987973" /translation="MVEMNFKVDAFEGPLDLLLHLIGQLEVDIYDIPMAEITDQYMEF VHTMQEMELDVASEYLVMAATLLAIKSKMLLPKQELEIDYDTLEEEEDPRDALVEKLM EYKRFKEAAKELKEKEAERSFYFSKPPMDLAEYDDGTKVAELDVSLNDMLSAFNKMLR RKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELFEEQTKEQLVVTFLA LLELMKRKLVEVEQAESFADLYVQGKGEEIS" misc_feature complement(2025401..2026138) /gene="scpA" /locus_tag="lmo1951" /note="segregation and condensation protein A; Reviewed; Region: scpA; PRK00104" /db_xref="CDD:234635" regulatory complement(2025405..2025410) /regulatory_class="ribosome_binding_site" /gene="scpA" /locus_tag="lmo1951" regulatory complement(2026150..2026155) /regulatory_class="ribosome_binding_site" gene complement(2026157..2027467) /gene="lysA" /locus_tag="lmo1952" /db_xref="GeneID:987983" CDS complement(2026157..2027467) /gene="lysA" /locus_tag="lmo1952" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="diaminopimelate decarboxylase" /protein_id="NP_465476.1" /db_xref="GeneID:987983" /translation="MTFERLGTMNVNAEGHLEIGGVDTLKLADKYGTPLYVYDVALIR DRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSGGELFTAIKANF PPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEKASVLIRVTP GIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQIFET TGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDEV RDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRP ALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGA YGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLSL" misc_feature complement(2026166..2027443) /gene="lysA" /locus_tag="lmo1952" /note="Diaminopimelate decarboxylase [Amino acid transport and metabolism]; Region: LysA; COG0019" /db_xref="CDD:439790" regulatory complement(2027475..2027480) /regulatory_class="ribosome_binding_site" gene complement(2027648..2028466) /gene="pnp" /locus_tag="lmo1953" /db_xref="GeneID:987976" CDS complement(2027648..2028466) /gene="pnp" /locus_tag="lmo1953" /EC_number="2.4.2.1" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation" /codon_start=1 /transl_table=11 /product="purine nucleoside phosphorylase" /protein_id="NP_465477.1" /db_xref="GeneID:987976" /translation="MSLEKVNEAVAKIRESYTGTPKIGLILGSGLGVLADEVNQPIKL SYSEIPHFPVSTVEGHAGQFVFGELENKEVVAMQGRFHFYEGYSMQDVTFPVRVMKEL GVEVLIVTNAAGGVNELYSAGDLMLISDHINFTGTSPLIGPNDEHFGPRFPDMSEAYN LALRVDARLIAQELNLTIREGVYAGFSGPTYETPAEIQMMRTLGADAVGMSTVPEVII ANHAGLRVLGISCITNMAAGILDQPLSHTEVIETTDQVRSTFLQYVKAIVAKIS" misc_feature complement(2027654..2028466) /gene="pnp" /locus_tag="lmo1953" /note="purine nucleoside phosphorylase; Provisional; Region: PRK08202" /db_xref="CDD:236183" misc_feature complement(order(2027720..2027722,2027729..2027731, 2027735..2027737,2027759..2027770,2027834..2027845, 2027876..2027878,2027891..2027896,2027909..2027911, 2028125..2028139,2028215..2028217,2028221..2028223, 2028227..2028229,2028380..2028385)) /gene="pnp" /locus_tag="lmo1953" /note="active site" /db_xref="CDD:350160" misc_feature complement(order(2027834..2027836,2028131..2028136, 2028221..2028223,2028227..2028229,2028287..2028289, 2028380..2028385)) /gene="pnp" /locus_tag="lmo1953" /note="phosphate binding site [ion binding]; other site" /db_xref="CDD:350160" misc_feature complement(order(2027720..2027722,2027729..2027731, 2027765..2027770,2027837..2027845,2027891..2027896, 2028125..2028133,2028215..2028217,2028221..2028223, 2028380..2028382)) /gene="pnp" /locus_tag="lmo1953" /note="purine nucleoside binding site [chemical binding]; other site" /db_xref="CDD:350160" misc_feature complement(order(2027729..2027731,2027735..2027743, 2027756..2027758,2027816..2027818,2027837..2027839, 2027858..2027866,2027870..2027875,2027879..2027914, 2027921..2027923,2027963..2027965,2027975..2027977, 2027984..2027986,2027993..2028013,2028044..2028049, 2028053..2028058,2028062..2028082,2028206..2028220)) /gene="pnp" /locus_tag="lmo1953" /note="homotrimer interface [polypeptide binding]; other site" /db_xref="CDD:350160" regulatory complement(2028475..2028480) /regulatory_class="ribosome_binding_site" gene complement(2028485..2029669) /gene="drm" /locus_tag="lmo1954" /db_xref="GeneID:987977" CDS complement(2028485..2029669) /gene="drm" /locus_tag="lmo1954" /EC_number="5.4.2.7" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose" /codon_start=1 /transl_table=11 /product="phosphopentomutase" /protein_id="NP_465478.1" /db_xref="GeneID:987977" /translation="MPDKFKRVHVVVMDSVGIGEAPDAAKFGDFDVDTFGHIAKHVGG LKMPEMGKLGLSNIREIEGIKKAEKPLAYYTKMQEASNGKDTMTGHWEIMGLYIDTPF RVFPDGFPDDLINQIEEKTGRKVIGNKPASGTEIMAELGEEHVKTGALIVYTSADSVL QIAAHEDVVPLEELYEICEFCRKITLDDPYMLGRIIARPFVGEPGAFVRTPNRHDYAL KPFKPTVMDALKDGGKDVIAIGKISDIFDGEGVTESIRTKSNMDGMDQFIAVLDKDFN GMSFLNLVDFDALFGHRRDPQGYADALVDFDGRLVEVMEKLTDDDLLIITADHGNDPT YTGTDHTREFVPLLVYSPRFKNGGSELELRKTFADLGATVADNFDVKMPEYGTSFLRD LK" misc_feature complement(2028497..2029657) /gene="drm" /locus_tag="lmo1954" /note="Phosphopentomutase [Carbohydrate transport and metabolism]; Region: DeoB; COG1015" /db_xref="CDD:440639" regulatory complement(2029677..2029682) /regulatory_class="ribosome_binding_site" gene complement(2029698..2030591) /locus_tag="lmo1955" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987975" CDS complement(2029698..2030591) /locus_tag="lmo1955" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="integrase/recombinase" /protein_id="NP_465479.1" /db_xref="GeneID:987975" /translation="MNDLIEDFLHFLIVERGLSANTIKAYERDLHYFVSYMDVTKELT DPNTLERSDIVGFMAFARQEGKSPRSVARYIASLRSFFHYLMHDGKMSHDPMIQIETP KQAQGLPKVLNLDDVEKLLSSSDTSTPLGLRDQAMMEILYATGLRVTELVSLKMDDLH LHMGFIQTIGKGDKERIIPLGKTATTVLEKYLEEARPKLRRPKYRNDFVFLNHHGQGL TRQGFWKILKGIAKESGIEKPITPHTLRHSFATHLLENGADLRSVQELLGHADISTTQ IYTHVTKLRLKDVYKQFHPRA" misc_feature complement(2029701..2030576) /locus_tag="lmo1955" /note="tyrosine recombinase XerD; Region: recomb_XerD; TIGR02225" /db_xref="CDD:274043" misc_feature complement(order(2029758..2029760,2029851..2029856, 2029863..2029865,2030151..2030153)) /locus_tag="lmo1955" /note="active site" /db_xref="CDD:271179" regulatory complement(2030600..2030605) /regulatory_class="ribosome_binding_site" regulatory complement(2030714..2030736) /regulatory_class="terminator" gene complement(2030744..2031196) /gene="fur" /locus_tag="lmo1956" /db_xref="GeneID:987991" CDS complement(2030744..2031196) /gene="fur" /locus_tag="lmo1956" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Fur family transcriptional regulator" /protein_id="NP_465480.1" /db_xref="GeneID:987991" /translation="MEGRIGRIKAQLHDASYKLTPQREATVRVLLENEKDHLSAEEVF LRVKDIAPDTGLATVYRTLELLTELRVVDKINFGDGVSRYDLRQEGAKHFHHHLVCLE CGSVEEIQEDLLEDVEKIVESKWNFLVKDHRLTFQGICANCRQKSKKE" misc_feature complement(2030762..2031178) /gene="fur" /locus_tag="lmo1956" /note="Fe2+ or Zn2+ uptake regulation protein Fur/Zur [Inorganic ion transport and metabolism]; Region: Fur; COG0735" /db_xref="CDD:440498" regulatory complement(2031204..2031209) /regulatory_class="ribosome_binding_site" gene complement(2031438..2032460) /gene="fhuG" /locus_tag="lmo1957" /db_xref="GeneID:987994" CDS complement(2031438..2032460) /gene="fhuG" /locus_tag="lmo1957" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ferrichrome ABC transporter permease" /protein_id="NP_465481.1" /db_xref="GeneID:987994" /translation="MYMTIAEKRKKSRRIWTLIILSVLIFCTFTYSVNAGYSKLPFLE VIKSFFGMADAGTQLIVTEFRLPRIVIALLVGAGLAVSGTILQGISGNGLADPGILGI NNGAGLAVMLYISFFPSTMDVPVLFMPFIGFIGAILTAFVVYGLSYSRSEGLLPNRLL LTGIAVAAAIAALITLLTVRLDPQNYQRYAEWMAGNIWASSWQYVFALLPWLIVLGAI AFMKVKTLDVLSFGDQVATGLGVRVEREKFVLLIVAVGLAAACVSVSGGIAFIGLIGP HIARKLVGSAHRWVMVTAALSGGLLLLLADTIGRLIIQPSEIFAGIVVAIIGAPYFLF LLAKAK" misc_feature complement(2031441..2032367) /gene="fhuG" /locus_tag="lmo1957" /note="ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]; Region: FepD; COG0609" /db_xref="CDD:440374" gene complement(2032460..2033485) /gene="fhuB" /locus_tag="lmo1958" /db_xref="GeneID:984897" CDS complement(2032460..2033485) /gene="fhuB" /locus_tag="lmo1958" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ferrichrome ABC transporter permease" /protein_id="NP_465482.1" /db_xref="GeneID:984897" /translation="MDKSKQIKMNTRPTVAKFILSGGLLLLLILALFGIAVGAADINL STVWDALFHYNSSDTQHQIIRSLRVPRVVADMAVGAAFAVAGAIMQGITRNPLADSGL LGLNAGSTFMVAVCFAFMPWLSYNSLILFSFVGAAIGAFLVFGVSSLAGSAMSPTRLV LAGAAVSSLLTALSEGLAIYFQLSQDLAFWYAGGVAGVKWSQLAAIWPWLLGALIAAI LLSKSITILSLGDDIAVGLGEKTTFVKIASMVVVLILAGLAVSVVGPVGFIGLIVPHL VRFLVGVDYRWIIPCSAVVGAFLTLAADILARTINPPYETPISVIFALIGVPFFLYVA RKERRNL" misc_feature complement(2032472..2033380) /gene="fhuB" /locus_tag="lmo1958" /note="ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]; Region: FepD; COG0609" /db_xref="CDD:440374" regulatory complement(2032469..2032474) /regulatory_class="ribosome_binding_site" /gene="fhuB" /locus_tag="lmo1958" regulatory complement(2033497..2033502) /regulatory_class="ribosome_binding_site" gene complement(2033587..2034528) /locus_tag="lmo1959" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984885" CDS complement(2033587..2034528) /locus_tag="lmo1959" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ferrichrome-binding protein" /protein_id="NP_465483.1" /db_xref="GeneID:984885" /translation="MKKGIILLVSMLFIAVVLTACGDNKSAGSEQVEMRTYTMANGKK VEIPAHPKRIVASEYLGNIVLLGMKPVGARAKQMENPFLKGKVDGIADIGDPVSAEKV AELKPDLIIVSNDDEFEAMSKIAPTVLIPYATSKNVEEDVRQIADLVGEKKAGEAWLD KFHQKAKESRAKLAGKLDPNETVGIYEVQDKDFYVMGQNMGRGGQAIYNALQLKAPAK IQKDVLDGQDWQKISLEVLPEFAADRMFVTTTSSGNAKDGEETLKDLTNSPIWKDLPT FKAGNVYQMDFDTMFYYDPLAVEGQLDIIVEKLLASN" misc_feature complement(2033644..2034402) /locus_tag="lmo1959" /note="Periplasmic binding protein FeuA. These proteins have predicted to function as initial receptors in ABC transport of metal ions in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct...; Region: FeuA; cd01138" /db_xref="CDD:238558" misc_feature complement(order(2033842..2033844,2033947..2033949, 2034184..2034186,2034190..2034192,2034247..2034249, 2034301..2034303,2034349..2034354)) /locus_tag="lmo1959" /note="putative ligand binding residues [chemical binding]; other site" /db_xref="CDD:238558" regulatory complement(2034536..2034541) /regulatory_class="ribosome_binding_site" regulatory 2034680..2034685 /regulatory_class="ribosome_binding_site" gene 2034693..2035517 /gene="fhuC" /locus_tag="lmo1960" /db_xref="GeneID:984884" CDS 2034693..2035517 /gene="fhuC" /locus_tag="lmo1960" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ferrichrome ABC transporter ATP-binding protein" /protein_id="NP_465484.1" /db_xref="GeneID:984884" /translation="MKDLHTDNLQISYDKRIIVDGLDIAIPANKITALVGANGSGKST ILKTMSRLMKPSKGAVYLDGKTIHSQPTRDVAKQLAILPQNPSAPDGLTVFELISYGR SPHQSSFKSITAKDREIIFWSLRVTNLTEFADRPIDSLSGGQRQRAWIAMALAQETDV LFLDEPTTFLDMTHQLDVLNLLKQLNQSENRTIVMVVHDLNHASRYAHHMIAIKEGKV IAEGTPTSVMTEQTLEDVFNIKADILIDPRSGVPLCLPYETCNGCEIVKELDSIAK" misc_feature 2034702..2035460 /gene="fhuC" /locus_tag="lmo1960" /note="ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component [Inorganic ion transport and metabolism, Coenzyme transport and metabolism]; Region: FepC; COG1120" /db_xref="CDD:440737" regulatory 2035492..2035497 /regulatory_class="ribosome_binding_site" /gene="fhuC" /locus_tag="lmo1960" gene 2035507..2036505 /locus_tag="lmo1961" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984397" CDS 2035507..2036505 /locus_tag="lmo1961" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_465485.1" /db_xref="GeneID:984397" /translation="MPNEVYDVTIIGGGPIGLFSAFYSGLRSMKTKIIDAEPAVGGKV RYFFPEKIIRDIGGIPAITGENLVANLKQQAETFHPTIVCSERVVDVTKLADGTFQLT SHNGSIHFSKTIVIATGSGTFEVNKLEALHAEDFPFAIHYDVKNIEQFRDKVVVVSGG GNSAIDWAQTLEPIAKKVHLIYRGEDFKAHEESVRELKNSRVEIHIHHEISELIGTNN QLTEITVCCNQTQTTKTIETEALFINHGVKVDLGTMAEWGFKQADFGIVVDDEMKTTV PGIFACGDSATYPRKIRIIAAGLHEGPIAINSAKKYLEPTAADEAMISTHHESFIG" misc_feature 2035522..2036451 /locus_tag="lmo1961" /note="Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; Region: TrxB; COG0492" /db_xref="CDD:440258" regulatory 2036511..2036536 /regulatory_class="terminator" regulatory complement(2036513..2036536) /regulatory_class="terminator" gene complement(2036521..2037141) /locus_tag="lmo1962" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987974" CDS complement(2036521..2037141) /locus_tag="lmo1962" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="NP_465486.1" /db_xref="GeneID:987974" /translation="MDEKRLKILEAAMGEFTEKGYQAASTNKICEKAGVSKGLIFHYF GSKEKLYIAAVSYAVDFATNEVRLEGEHWGDFVEMAIWSTKMKLDFNRKFPAVFGLIM QAYGNPPVELKGKLDGFFDKAIERSEAQMNQVLSEMKLKKDVNMDAARKVMAALFKHI TEISTVYLQIHPNATMEEFVPLANDFTEMMRIVEFGICEEKKDLGE" misc_feature complement(2036671..2037138) /locus_tag="lmo1962" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" gene complement(2037141..2037956) /locus_tag="lmo1963" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987995" CDS complement(2037141..2037956) /locus_tag="lmo1963" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465487.1" /db_xref="GeneID:987995" /translation="MNILHIEWKTRIKSLVVWAVVVIVILGVFMAFFPSMQSSGMQDL VNTKMNALPQDMMKILHMDSMADLTNIDAYFAYVFQYIFIAACVYAALIGAQALIKEE TDGTIEFLYAQPITRSSLVFWKMIGNLLSFVAFWVITFLASVALVLFLKPSGVDGGNL VMELVRVFSSELLVAAVFMSAGFMVSSVLRSAKQASPVALALVFLTYILGIMAGLNDK VDFFKYFSPINYAIPSEIMDKGITGTNALISCGVIVVMVAMTFVLYKKKDLKV" misc_feature complement(2037150..2037956) /locus_tag="lmo1963" /note="ABC-2 family transporter protein; Region: ABC2_membrane_2; pfam12679" /db_xref="CDD:403774" regulatory complement(2037152..2037157) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1963" gene complement(2037953..2038840) /locus_tag="lmo1964" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987972" CDS complement(2037953..2038840) /locus_tag="lmo1964" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465488.1" /db_xref="GeneID:987972" /translation="MEAIKVESLTKNYHKKRAIENVDLSVNEGELYGFIGPNGAGKST TIKVLLNFIYATSGGATILGKDVVKDSAEIKKMVGYVPSEVRYYPQMTANDIIHYAAK FHHIENATQKMNKYYEMFSIDPKKRFGEMSLGNKKKVAIVAGLITEPQLFILDEPTNG LDPLMQHYLFKEMTERNKEGMTIFLSSHNLREVQEYCTRAAFIRNGNIIAVEDIANQQ MTGKVIALKGTNLPLEKLTNAGARIIEKEMGKARLIFDDDIKTILPLLQEKEITDLTI TNQELEDKFMTLYEGGEIK" misc_feature complement(2038193..2038831) /locus_tag="lmo1964" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" regulatory complement(2037966..2037971) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1964" regulatory complement(2038848..2038853) /regulatory_class="ribosome_binding_site" gene 2039087..2039375 /locus_tag="lmos75" /db_xref="GeneID:18245160" misc_RNA 2039087..2039375 /locus_tag="lmos75" /product="rli44" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245160" gene complement(2039441..2039998) /locus_tag="lmo1965" /db_xref="GeneID:987969" CDS complement(2039441..2039998) /locus_tag="lmo1965" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465489.1" /db_xref="GeneID:987969" /translation="MDSLEEKTLHTEQIFSGNIIELQVDDVELPNGEKSKREIVKHPG AVAIIPFSEDGGMYLVEQYRKPLEKTIIEIPAGKMEPGEDPLVTARRELEEETGFQSD DLTYLTSFYTSPGFANELLHIYVARDLRKMEQPLAQDADEFINLVKVTPEEAEQLIEQ QFIHDAKTMYAMQYWKLQLLIEENE" misc_feature complement(2039471..2039875) /locus_tag="lmo1965" /note="ADP-ribose pyrophosphatase, UDP-glucose pyrophosphatase, and similar proteins; Region: NUDIX_ADPRase_Nudt5_UGPPase_Nudt14; cd03424" /db_xref="CDD:467530" regulatory complement(2040007..2040012) /regulatory_class="ribosome_binding_site" regulatory 2040259..2040264 /regulatory_class="ribosome_binding_site" gene 2040274..2040933 /locus_tag="lmo1966" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987970" CDS 2040274..2040933 /locus_tag="lmo1966" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465490.1" /db_xref="GeneID:987970" /translation="MTVFKKILAFTGSILLVIILGGILTSLIHSGLVIATIVIAVAAI LFFFSSKAGDRAQMIATGLTKKEYKYIRTNLEEARVKIIRLQKIMTQNKALYSFQERN KTLLLTKRIYGIVKDEPKRFYEAEDFFFSHLDSLVELTEKYAFLEKQPVKDKKIYQTL SDTRTLLNDLSRVIEKDLFTLLNQDVNNLDFELEVAKNSISKQKKKFERGTKDDREQA K" misc_feature 2040292..2040861 /locus_tag="lmo1966" /note="5-bromo-4-chloroindolyl phosphate hydrolysis protein; Region: Halogen_Hydrol; pfam10112" /db_xref="CDD:431063" regulatory 2040897..2040902 /regulatory_class="ribosome_binding_site" /locus_tag="lmo1966" gene 2040911..2042110 /locus_tag="lmo1967" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987886" CDS 2040911..2042110 /locus_tag="lmo1967" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="toxic ion resistance protein" /protein_id="NP_465491.1" /db_xref="GeneID:987886" /translation="MTENKPSEQTNELKDLVVEKEFNQTLDDLLANPFGSDGESAASI VNNETDAAPRLVDMLTETNKKQALELSKQIEPGNQAAILGYGAPAQAKLHDFSHSMLA HVQKQDVGPIGDIISDLMYRLQEADPDELAARNKNVFTKMFHRVKQSINEITSKYQKI GTQIDRIALKLEHSKKRLMEDNSFLEQLYDKNKDYFQALNIYIAAGELKLEEINTKML PELRKKAEQTGDQMDYQEVNDLTQFADRLDKRVYDLRLSRQITIQQAPQIRLIQNTNQ ALAEKIQSSIMTAIPLWKNQVAIALTLLRQQQAVAAQRQVSETTNELLKRNADMLKTN AIETARENERGIVDIETLKETQSSLIETLQETLKIQQEGRAKRAVAEKELVTMEQELK ERLLEMK" misc_feature 2040953..2042107 /locus_tag="lmo1967" /note="Uncharacterized conserved protein YaaN involved in tellurite resistance [Defense mechanisms]; Region: YaaN; COG3853" /db_xref="CDD:443062" regulatory 2042117..2042142 /regulatory_class="terminator" regulatory complement(2042117..2042142) /regulatory_class="terminator" gene complement(2042157..2042900) /locus_tag="lmo1968" /db_xref="GeneID:984877" CDS complement(2042157..2042900) /locus_tag="lmo1968" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="creatinine amidohydrolase" /protein_id="NP_465492.1" /db_xref="GeneID:984877" /translation="MVQSANKIINMTRDEVEKAITDFPVAILPLGATEQHGHHLPLGV DIFLADHLAELVSEKTGAVVIPPMPFGYSWVWRDIPGTISIQQHHVEAIIKDVAHSVS RYGVKMLVLINGHDSNNNSMKYAVRELADELEMPVMYLFYPSLSEVMEKNCESGTWHG MIHACEFETSLMLATKKELVQMKKAVREYPEKPTLYGKTTISLGDLSKSGVYGDASLA TEEKGEQMIELFAEKMTALLLEGYGYLTK" misc_feature complement(2042181..2042873) /locus_tag="lmo1968" /note="Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis) [Coenzyme transport and metabolism]; Region: ArfB; COG1402" /db_xref="CDD:441012" regulatory complement(2042909..2042914) /regulatory_class="ribosome_binding_site" gene complement(2042913..2043521) /locus_tag="lmo1969" /db_xref="GeneID:984879" CDS complement(2042913..2043521) /locus_tag="lmo1969" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="2-keto-3-deoxygluconate-6-phosphate aldolase" /protein_id="NP_465493.1" /db_xref="GeneID:984879" /translation="MLTMEKDQLMAIIRDVAKEDFIPIVELLLEEGITMLEVSLSNET KGLACLEAVSQHFSAKQLTIGAGTVVEKNQIQKVKQAGATFIMTPGFEKSIVEECIKQ DIAVFPGVFSPGEIMEGIQLGIEIFKVFPAGTLGPTYIKSLRGPFPNIHLMAVGGVDS GNIAEFKAAGCDSYAIGSELVPRGATKAMLNQIRENVKAFQR" misc_feature complement(2042934..2043512) /locus_tag="lmo1969" /note="KDPG and KHG aldolase; Region: KDPG_aldolase; cd00452" /db_xref="CDD:188632" misc_feature complement(order(2043057..2043059,2043132..2043134, 2043138..2043140,2043318..2043320,2043399..2043401, 2043411..2043413,2043486..2043488)) /locus_tag="lmo1969" /note="active site" /db_xref="CDD:188632" misc_feature complement(order(2043081..2043086,2043096..2043098, 2043129..2043134,2043159..2043161,2043171..2043173, 2043177..2043188,2043246..2043257,2043312..2043314, 2043318..2043320,2043399..2043401)) /locus_tag="lmo1969" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:188632" misc_feature complement(2043138..2043140) /locus_tag="lmo1969" /note="catalytic residue [active]" /db_xref="CDD:188632" regulatory complement(2043531..2043536) /regulatory_class="ribosome_binding_site" gene complement(2043540..2044457) /locus_tag="lmo1970" /db_xref="GeneID:984875" CDS complement(2043540..2044457) /locus_tag="lmo1970" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphotriesterase" /protein_id="NP_465494.1" /db_xref="GeneID:984875" /translation="MEKKIRTVLGDISKESLGFTYSHEHLWCCPPSVQKDRDFELTDY ESSLEELKTFQSIGGQTLVDASTLDYGRDGNKLKTMSEESGVNVLGVTGFNKHIYFPD WVQEESIEQITDRLIYDIEKGMDGSDARAGILKSGSWYNLIHPLENKVTRAVAWAQKE TGAPIWLHTEAGTMGQEMLAILEEEGVNMELVAVGHSDRNADPYYHLKLAEKGAYVQF DGCGKVKYYPDSTRVELVKNMLENGFGDKLLISGDMGRKSYLHAYGGGPGFRFIKTKF IPRLLEEGVTEQQIQTIFYDNPANWLAKF" misc_feature complement(2043549..2044451) /locus_tag="lmo1970" /note="Predicted metal-dependent hydrolase, phosphotriesterase family [General function prediction only]; Region: Php; COG1735" /db_xref="CDD:441341" regulatory complement(2044467..2044472) /regulatory_class="ribosome_binding_site" gene complement(2044481..2045749) /gene="ulaA" /locus_tag="lmo1971" /gene_synonym="sgaT" /db_xref="GeneID:984874" CDS complement(2044481..2045749) /gene="ulaA" /locus_tag="lmo1971" /gene_synonym="sgaT" /experiment="EXISTENCE:[PMID:19448609]" /note="membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr" /codon_start=1 /transl_table=11 /product="PTS ascorbate transporter subunit IIC" /protein_id="NP_465495.1" /db_xref="GeneID:984874" /translation="MLTFITEIFSTPAFILGIIAAIGLIALRKTGSDIVKGTLKTIFG FIMLQQGSAIIVGSLIPFSTMFENAFQLKGVVAEDNAIAAAVQQILGTETSLILVFGF IINVILARTTRWKYIFLTGHMMFSFAATMAIVFDQMGFNSWQIILFGSIAQGISSIVF PALAQPFVRKVTGNDQVGFGFWGSSLVWATGWLGGKLGNKANSTEDLKVPKKLDFLKE MSVLMGIVMAVIYIFTSFFVDEPVMKELAGTQSNVLFAILQSFTFVVGILILLQGVRM FLGELVPAFKGISEKIVPGAIPALDVPVFYSFAPTATTIGFLCAVVGGLGATLVSTML PVVVLPSVIGLFFMGGAAGVFGNAMGGRRGAIIAGLLLGFIFQMIVAIAYPILGLDGY GIQGLWFASTDAIIVIVIIRLIGALFGIAL" misc_feature complement(2044487..2045740) /gene="ulaA" /locus_tag="lmo1971" /gene_synonym="sgaT" /note="Ascorbate-specific PTS system IIC component UlaA [Carbohydrate transport and metabolism]; Region: UlaA; COG3037" /db_xref="CDD:442271" regulatory complement(2045756..2045761) /regulatory_class="ribosome_binding_site" gene complement(2045765..2046046) /locus_tag="lmo1972" /db_xref="GeneID:984873" CDS complement(2045765..2046046) /locus_tag="lmo1972" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS pentitol transporter subunit IIB" /protein_id="NP_465496.1" /db_xref="GeneID:984873" /translation="MEILTVCGMGFGTSLMLLMEIQDMAKKHGFTVGGEATDLSSAKG RKCDMIVASSEIAKELAEEEVKVVPIINILDKKEIEEKVLPAIKQYFAS" misc_feature complement(2045786..2046040) /locus_tag="lmo1972" /note="subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel...; Region: PTS_IIB_ascorbate; cd05563" /db_xref="CDD:99905" misc_feature complement(order(2046005..2046013,2046017..2046028)) /locus_tag="lmo1972" /note="P-loop; other site" /db_xref="CDD:99905" misc_feature complement(order(2046005..2046010,2046017..2046022, 2046026..2046028)) /locus_tag="lmo1972" /note="active site" /db_xref="CDD:99905" misc_feature complement(2046026..2046028) /locus_tag="lmo1972" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99905" gene complement(2046046..2046489) /locus_tag="lmo1973" /db_xref="GeneID:987968" CDS complement(2046046..2046489) /locus_tag="lmo1973" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS sugar transporter subunit IIA" /protein_id="NP_465497.1" /db_xref="GeneID:987968" /translation="MLPITLEQIELDVEVESPVDAIRAAGNLLVKTESASSDYVDAMV ASYEKLGPYIVLAPHIAIPHARPEHGVKKQCMSIVRLKKPIKFGHPANDDVSLVIAIG GVDTNFHIKMLQALSELLTDEDKLKRLKTSTDKAEILCTINKEEK" misc_feature complement(2046073..2046480) /locus_tag="lmo1973" /note="PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_fru; cd00211" /db_xref="CDD:238129" misc_feature complement(order(2046298..2046300,2046352..2046354)) /locus_tag="lmo1973" /note="active site" /db_xref="CDD:238129" misc_feature complement(2046298..2046300) /locus_tag="lmo1973" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:238129" regulatory complement(2046054..2046059) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1973" regulatory complement(2046498..2046503) /regulatory_class="ribosome_binding_site" gene complement(2046507..2047256) /locus_tag="lmo1974" /db_xref="GeneID:984870" CDS complement(2046507..2047256) /locus_tag="lmo1974" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="NP_465498.1" /db_xref="GeneID:984870" /translation="MKKLNKSSSTPLYMQLKNQLQEKIEQDMSVGDLLLTETEIEKMY DVSRMTVRKAIEELVNEGIVSKQQGKGTFVSQTKTTQGLGRIFSWSEEMKLQHKESKT ISVEISAAIPSKKIRTALQLGKHEEVTCIRRVREIDGEPVAIMINYLRAKYVPGLLEN GLKSDSLYHDLEEIYHISLVHADEIITARLSTPIESALLAVPEDSAVLHVRRTSYMKG NTPVEVVDMVARGDRYQYLAELEGRTKKHII" misc_feature complement(2046528..2047238) /locus_tag="lmo1974" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: MngR; COG2188" /db_xref="CDD:441791" regulatory complement(2047269..2047274) /regulatory_class="ribosome_binding_site" regulatory complement(2047418..2047439) /regulatory_class="terminator" gene complement(2047444..2048514) /locus_tag="lmo1975" /db_xref="GeneID:985427" CDS complement(2047444..2048514) /locus_tag="lmo1975" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function" /codon_start=1 /transl_table=11 /product="DNA polymerase IV" /protein_id="NP_465499.1" /db_xref="GeneID:985427" /translation="MDTSRKIIHIDMDAFYASVEQRDHPEFRGKPLIIGGDPNKRGVV ATCSYEARKFGVHSAMPTRQAAKLCPNGIFIHGNMAHYVEVSNQIREIFSRYTDIIEP LSLDEAYLDVTENKKGMKSATMVAREIQQTIYQELGLTASAGVSFNKFIAKIASDFKK PAGITVVTPEEAEAFLEQIPVTKFYGVGKVTAEKLHRLGIETGADLKKWSEWDLIREL HKHGYHLYRHVRGRSNNIVNPHRDRKSVGKETTFEFNVLDSRVLEQSLMQFAKKVEER LIKLQKHGKTVVLKLRYSDFTTITKRLTLNEYTNDASQIYQAAALLLIESYTGQDSIR LIGLTVTNLKPVYFENLRLEGL" misc_feature complement(2047456..2048481) /locus_tag="lmo1975" /note="DNA polymerase IV; Validated; Region: PRK02406" /db_xref="CDD:235035" regulatory complement(2048523..2048528) /regulatory_class="ribosome_binding_site" regulatory complement(2048591..2048610) /regulatory_class="terminator" gene complement(2048623..2049414) /locus_tag="lmo1976" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984869" CDS complement(2048623..2049414) /locus_tag="lmo1976" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_465500.1" /db_xref="GeneID:984869" /translation="MNPFLKNKTVLITGASNGLGAEIARQVAMSGGNVIITARSTKKL IELQKDIHDKFSVEATYFTLDMTDFEQVKQVSAEINASYQIDVLVNCAGFGLFENAID IPFETIEKMFDTNVLGLIQLTQLILPQMQARKAGHIINIASQAAKIATPKSTVYSATK YAVLGFSNALRLELMPDKINVTTINPGPIATNFFDVADKSSNYLETVGKLVLKPEKVA HKTVQIMGTKRREINLPFVMNIATRLYQVMPQVIEFFGKGAFLKK" misc_feature complement(2048635..2049402) /locus_tag="lmo1976" /note="Short-chain dehydrogenase [General function prediction only]; Region: YqjQ; COG0300" /db_xref="CDD:440069" gene complement(2049419..2050339) /locus_tag="lmo1977" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984866" CDS complement(2049419..2050339) /locus_tag="lmo1977" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465501.1" /db_xref="GeneID:984866" /translation="MELVFLGTGAGVPSRGRNVTSIALSMLNERNTIWLFDCGEATQH QIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAGIAEYVET SLRLSGTRLTYKINFEEIEPGVIFEDKMFIVTADDLDHGVRSFGYRIVEKDKQGALNA EKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGKIISIFGDTRETSSE LELALNADILVHEATFEGDKAKMAGEYMHSTTLQAAKLAKTANVKKLILTHISSRYDR DASKELLIEAKTIFENTEIAYDLAVFQVGE" misc_feature complement(2049428..2050336) /locus_tag="lmo1977" /note="ribonuclease Z; Region: RNase_Z; TIGR02651" /db_xref="CDD:274246" misc_feature complement(order(2049533..2049535,2049647..2049649, 2049707..2049709,2049917..2049922,2050136..2050141, 2050145..2050147,2050151..2050156,2050229..2050231)) /locus_tag="lmo1977" /note="putative active site [active]" /db_xref="CDD:293803" regulatory complement(2049423..2049428) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1977" regulatory complement(2050351..2050355) /regulatory_class="ribosome_binding_site" regulatory 2050623..2050628 /regulatory_class="ribosome_binding_site" gene 2050639..2052114 /locus_tag="lmo1978" /db_xref="GeneID:984868" CDS 2050639..2052114 /locus_tag="lmo1978" /EC_number="1.1.1.49" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate 1-dehydrogenase" /protein_id="NP_465502.1" /db_xref="GeneID:984868" /translation="MTDELEQKALITIFGGTGDLANRKLYPSLYHLYSKGSLGDNFAV IGTARREWSNDFFRDKVKESIKDIDGSEKDADAFASHFYYQSHDVTNKESYLTLKDLS DELDAKYELDGNRLFYLAMAPNFFGTIASRIKSEGFVDTDGFHRLIIEKPFGHDLASA EELNNSLRQAFKEDEIYRIDHYLGKEMIQNISVIRFANSIIESLWNNRYIDNIQVTLT EVLGVEDRGRYYDESGALRDMVQNHILQIVSLLAMEPPINLSTREIRHEKVRALRSLR VFEGKEVHQSFIRGQYGPGEVDGKELKGYRQEDNVDPHSNTETFVAAKLEIDNFRWAG VPFYIRTGKRLAKKTTQIAIQFKDVPLNLFGQQQSLGGNVLVIHIQPDEGITLHLNVK EPGQGMVTMPVNLNYIHSSPDGMNTPEAYEKLILDCLRGDATYFSHWDEVSLSWNFID HIADVWTNTKDHFPNYKSGSMGPKEADDLIQRDGFQWFPID" misc_feature 2050657..2052111 /locus_tag="lmo1978" /note="Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]; Region: Zwf; COG0364" /db_xref="CDD:440133" regulatory 2052123..2052154 /regulatory_class="terminator" regulatory 2052220..2052225 /regulatory_class="ribosome_binding_site" gene 2052233..2052664 /locus_tag="lmo1979" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987964" CDS 2052233..2052664 /locus_tag="lmo1979" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465503.1" /db_xref="GeneID:987964" /translation="MAENIDDYLEKGMYGAKEINPAEKKKYLGTYRERVLVALTKEEV LTQEYLPELEKAILENSDSKLLLNGLLHYNSLRPYIKLAEKCKHEFSIVTRLEGETDI YLVLACQKAVNKEDIHLYKEAEVEQEEEPISLLEKVRKLFN" misc_feature 2052233..2052658 /locus_tag="lmo1979" /note="Uncharacterized conserved protein YueI, DUF2278 family [Function unknown]; Region: YueI; COG5506" /db_xref="CDD:444257" regulatory 2052683..2052688 /regulatory_class="ribosome_binding_site" gene 2052696..2052833 /locus_tag="lmo1980" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987966" CDS 2052696..2052833 /locus_tag="lmo1980" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo1980" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465504.1" /db_xref="GeneID:987966" /translation="MLHIITLSLAILMALQTIYFFIRKNVNMGVMFLLITAALLLLST I" gene complement(2052816..2053301) /locus_tag="lmo1981" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987963" CDS complement(2052816..2053301) /locus_tag="lmo1981" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465505.1" /db_xref="GeneID:987963" /translation="MGISNKTNLIIIASGKPKIWDKLPDIGPVKASEVYTGTFHRLSR AYAEQFANEYLILSPKYGFLRPDDIVLKTYDVRFTMKGTGADTIQLGELKEQWQKLQI NPTEPIPMLGGKKFRGLLTSITAGKQLFSFPLDGASGIGVMQQNLKQAVETGIPLNRT E" gene complement(2053274..2053801) /locus_tag="lmo1982" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984865" CDS complement(2053274..2053801) /locus_tag="lmo1982" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465506.1" /db_xref="GeneID:984865" /translation="MDNLETDRLILINYTLEMIQATINGTEALEKASGYHVSPDWPGI DFFFYLPYVLENVKKDDRMIKWTRLVVLKEENKIIGEIGGQGNPDETGEIEIGYSIVP DYQNKGYMSEALIGMVAWLEEQSVIRRIFARSYEQNIASIQVLKHNHFVHIKEKDTEE KQGRVMMWEYPIKRT" misc_feature complement(2053343..2053792) /locus_tag="lmo1982" /note="Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: RimL; COG1670" /db_xref="CDD:441276" regulatory complement(2053311..2053316) /regulatory_class="ribosome_binding_site" /locus_tag="lmo1982" regulatory complement(2053810..2053816) /regulatory_class="ribosome_binding_site" gene 2054124..2054308 /locus_tag="lmos76" /db_xref="GeneID:18245161" misc_RNA 2054124..2054308 /locus_tag="lmos76" /product="rli60" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245161" regulatory 2054477..2054483 /regulatory_class="ribosome_binding_site" gene 2054493..2056187 /gene="ilvD" /locus_tag="lmo1983" /db_xref="GeneID:984864" CDS 2054493..2056187 /gene="ilvD" /locus_tag="lmo1983" /EC_number="4.2.1.9" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis" /codon_start=1 /transl_table=11 /product="dihydroxy-acid dehydratase" /protein_id="NP_465507.1" /db_xref="GeneID:984864" /translation="MRSDKIKKGVEQAPARSLLHATGQIKSPGDMDKPFIAICNSYID IVPGHVHLRELADVAKEAIREAGGIPFEFNTIGVDDGIAMGHIGMRYSLPSREVIADA AETVINAHWFDGVFYIPNCDKITPGMLLASVRTNVPAIFCSGGPMKAGLSAHGKALTL SSVFEAVGAFKDGSMSQEDFLDMEANACPTCGSCAGMFTANSMNCLMEILGMAVPGNG TTLAVSDARRDLIRESAFHLMDLVKKDIRPRDIITKDAIDDAFALDMAMGGSTNTVLH TLALANEAGIEDYDLERINDIAKRVPYLSKIAPSSSYSMHDVHEAGGVSAIVKELVDL GGAIHPDRITVTGKTIRENVADAKINNTDVIHPKENPYSPVGGLSMLFGNIAPKGAAI KVGGVDPSVQVFKGEAICFSSHDEAVEAIDNHTVREGHVVVIRYEGPKGGPGMPEMLA PTSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAAAGGPIALVHDGDIITIDLP NRTLNVDVPDEVLEERRKELPKFKAKVKTGYLARYTALVTSAHTGGILQIPEDLID" misc_feature 2054493..2056169 /gene="ilvD" /locus_tag="lmo1983" /note="dihydroxy-acid dehydratase; Provisional; Region: PRK00911" /db_xref="CDD:234861" regulatory 2056191..2056196 /regulatory_class="ribosome_binding_site" gene 2056205..2057926 /gene="ilvB" /locus_tag="lmo1984" /db_xref="GeneID:984805" CDS 2056205..2057926 /gene="ilvB" /locus_tag="lmo1984" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acetolactate synthase" /protein_id="NP_465508.1" /db_xref="GeneID:984805" /translation="MIDTTKTNEKATKKQNKSGAELLIDALKKQQVDMIFGYPGGAVL PLYDAFYDCDIPHILTRHEQGAIHAAEGYARVTGKPGVVVVTSGPGATNVLTGIADAM SDSIPLVIFTGQVHTPGIGKDAFQEADMIGLTIPITKYNYQVRDVRDLPKIVNEAFHI ASTGRKGPVVVDIPKDMGIIQTESVRPDTIDLPGYQPTYSPNPLQLEKLMQSLSAASK PLILAGAGVNHARATAELLEFAERYQIPIVNTLLGLGSFPQSHDLFLGMGGMHGSYAA NMALTDCDLLINFGSRFDDRLASAPKEFATKATIAHIDIDPAEIGKIIETQIPIVADI NETLTQLLQMELPVHPDTSHWYKLNMTRKNRHPFNFDRTKKAEIKPQRVIELIGEITQ GEALVSTDVGQHQMWAAQFYPFQFDHQIITSGGLGTMGFGFPAAVGAQLAFPDKTVVA IVGDGGFQMTNQELAILNDYQINVKTVIINNGSLGMVRQWQEKFHGERYSHSIFTSQP DFVKLSEAYGVKGVRLTNPETLEKDLRKAFAHPGPIVIDVHVAKDELVLPMVPSGKPN HQMEGVE" misc_feature 2056220..2057923 /gene="ilvB" /locus_tag="lmo1984" /note="acetolactate synthase large subunit; Region: PRK08155; cl39075" /db_xref="CDD:453955" regulatory 2057913..2057918 /regulatory_class="ribosome_binding_site" /gene="ilvB" /locus_tag="lmo1984" gene 2057927..2058418 /gene="ilvH" /locus_tag="lmo1985" /db_xref="GeneID:987961" CDS 2057927..2058418 /gene="ilvH" /locus_tag="lmo1985" /experiment="EXISTENCE:[PMID:19448609]" /note="with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit" /codon_start=1 /transl_table=11 /product="acetolactate synthase small subunit" /protein_id="NP_465509.1" /db_xref="GeneID:987961" /translation="MRRIITATVNNSSGVLNRITGVISRRQYNIDSISVGWTEIPNVS RITIVVHVDSLYEIEQVTKQLNKQIDVLKVSDITDDAHIERELALLKINSPAALRSEL NAVIEPFRATVIDVGTKNVVIQVTGTSEKIDAFVDTVRPYGIKQMARTGVTGFTRSPK KMG" misc_feature 2057927..2058412 /gene="ilvH" /locus_tag="lmo1985" /note="acetolactate synthase 3 regulatory subunit; Reviewed; Region: ilvH; PRK11895" /db_xref="CDD:183365" regulatory 2058501..2058506 /regulatory_class="ribosome_binding_site" gene 2058516..2059511 /gene="ilvC" /locus_tag="lmo1986" /db_xref="GeneID:986504" CDS 2058516..2059511 /gene="ilvC" /locus_tag="lmo1986" /EC_number="1.1.1.86" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis" /codon_start=1 /transl_table=11 /product="ketol-acid reductoisomerase" /protein_id="NP_465510.1" /db_xref="GeneID:986504" /translation="MTKVYYEDAVKNNALEGKTVAVIGYGSQGHAHSQNLRDNGNNVI IGIREGKSAESARNDGFDVYSVSEAADKADVIMILLPDETQGETYENEIKPNLKAGNS LVFAHGFNIHFDVINPPSDVDVFLVAPKGPGHLVRRTFVEGGAVPSLFAIYQDATGNA RDTALSYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGATHLIQAGFETLVEAGY QPELAYFEVLHEMKLIVDLMYEGGMEKMRHSISNTAEYGDYVSGPRVVTADTKKAMKE VLTDIQNGNFAKSFINDNKNGFKEFHRMRKEQQGHQIEKVGAELREMMPFVKPQH" misc_feature 2058516..2059502 /gene="ilvC" /locus_tag="lmo1986" /note="ketol-acid reductoisomerase; Provisional; Region: PRK05479" /db_xref="CDD:235491" regulatory 2059521..2059554 /regulatory_class="terminator" regulatory 2059654..2059659 /regulatory_class="ribosome_binding_site" gene 2059669..2061207 /gene="leuA" /locus_tag="lmo1987" /db_xref="GeneID:984863" CDS 2059669..2061207 /gene="leuA" /locus_tag="lmo1987" /EC_number="2.3.3.13" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /protein_id="NP_465511.1" /db_xref="GeneID:984863" /translation="MKKIQFFDTTLRDGEQTPGVNFDVKEKIQIALQLEKLGIDVIEA GFPISSPGDFECVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFLATS DVHMEYKLKMSRAEVLASIKHHISYARQKFEVVQFSPEDATRSDRAFLIEAVQTAIDA GATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDITFASHCHDDLGMATANALAAIE NGARRVEGTINGIGERAGNTALEEVAVALHIRKDFYQAETNIVLNQFKNSSDLISRLS GMPVPRNKAVIGGNAYAHESGIHQDGVLKNPDTYEIITPALVGVDKNSLPLGKLSGKH AFNTRMEEMGYTLTEQEQKDAFKRFKQLADAKKEVTEEDLHALILGQSSESADDFELK HLQVQYVTGGVQGAIVRIEERDGALVEDAATGSGSIEAIYNTINRLMKQDIELTDYRI QAITAGQDAQAEVHVVIKNDKGAEFHGIGIDFDVLTASAKAYLQASGKSKTASKQADF EEVK" misc_feature 2059669..2061153 /gene="leuA" /locus_tag="lmo1987" /note="2-isopropylmalate synthase; Validated; Region: PRK00915" /db_xref="CDD:234864" misc_feature order(2059702..2059707,2059714..2059716,2059795..2059797, 2059888..2059890,2059954..2059956,2060080..2060082, 2060086..2060088,2060170..2060172,2060176..2060178, 2060269..2060271,2060275..2060277) /gene="leuA" /locus_tag="lmo1987" /note="active site" /db_xref="CDD:163678" misc_feature order(2059702..2059707,2059795..2059797) /gene="leuA" /locus_tag="lmo1987" /note="catalytic residues [active]" /db_xref="CDD:163678" misc_feature order(2060269..2060271,2060275..2060277) /gene="leuA" /locus_tag="lmo1987" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:163678" regulatory 2061194..2061199 /regulatory_class="ribosome_binding_site" /gene="leuA" /locus_tag="lmo1987" gene 2061209..2062261 /gene="leuB" /locus_tag="lmo1988" /db_xref="GeneID:984909" CDS 2061209..2062261 /gene="leuB" /locus_tag="lmo1988" /EC_number="1.1.1.85" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydrogenase" /protein_id="NP_465512.1" /db_xref="GeneID:984909" /translation="MTYKITSLAGDGIGPEIMTSGLQVLEAVAKKYNHTFEIESHPFG GAGIDVAQDPIPSSTLKACQDADAILLGAIGGPKWDNAPKRPEDGLLALRKALGLFAN IRPIQVPSSITHLSPLKKEIVENTDFVVVRELTGGLYFGEPKHWDESAAVDSLTYTRA EIERIIEKAFEIAATRNKKVTSVDKANVLASSKLWRKIAEEVASRHPDITLEHLYIDA AAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYEPIHGS APDIANQNIANPMSMISSVSMMLRQSFSLFKEADAIDAAATRTMQAGFLTADLGGNTT TTDFTNEVLKQIEGGE" misc_feature 2061209..2062255 /gene="leuB" /locus_tag="lmo1988" /note="3-isopropylmalate dehydrogenase; Provisional; Region: PRK00772" /db_xref="CDD:234832" regulatory 2062249..2062254 /regulatory_class="ribosome_binding_site" /gene="leuB" /locus_tag="lmo1988" gene 2062263..2063651 /gene="leuC" /locus_tag="lmo1989" /db_xref="GeneID:985310" CDS 2062263..2063651 /gene="leuC" /locus_tag="lmo1989" /EC_number="4.2.1.33" /experiment="EXISTENCE:[PMID:19448609]" /note="dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate" /codon_start=1 /transl_table=11 /product="isopropylmalate isomerase large subunit" /protein_id="NP_465513.1" /db_xref="GeneID:985310" /translation="MGKTLFDKLWNRHVIYGKEGEPQLLYVDLHLIHEVTSPQAFEGL RLENRPLRRPDKTFATMDHNVPTEDIFNIQDLVAKKQIEALQTNCAEFGVTLADMGSD RQGIVHMVGPETGLTQPGKVIVCGDSHTATHGAFGAIGFGIGSSEVEHVFATQTIWQQ KPKSMGIEINGKLPKGVYAKDIILHLIATYGVAFGTGYAVEYYGETIRNMSMEERMTI CNMAIEGGAKMGMMAPDETTFEYVRGREYAPTDMDKAISDWKTLQTDSDAEYDLHIKM DASILEPYVTWGTNPEMGVPFSKAFPEIKDMNYERAYEYMGLKPGQTAEQIELGYVFI GSCTNARLSDLEEAARIVKGNKVKNNIRALVVPGSRQVRNAAESIGLDKIFIEAGFEW REPGCSMCLGMNPDQVPDGVHCASTSNRNFEGRQGKGARTHLVSPAMAAAAAINGHFI DIRKVAVISGGN" misc_feature 2062263..2063627 /gene="leuC" /locus_tag="lmo1989" /note="3-isopropylmalate dehydratase large subunit; Region: PRK05478" /db_xref="CDD:235490" misc_feature order(2062359..2062361,2062368..2062370,2062641..2062646, 2063463..2063465,2063520..2063522,2063535..2063537) /gene="leuC" /locus_tag="lmo1989" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:153133" misc_feature order(2062647..2062649,2063271..2063273,2063451..2063453, 2063460..2063465,2063517..2063519) /gene="leuC" /locus_tag="lmo1989" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:153133" regulatory 2063623..2063628 /regulatory_class="ribosome_binding_site" /gene="leuC" /locus_tag="lmo1989" gene 2063638..2064219 /gene="leuD" /locus_tag="lmo1990" /db_xref="GeneID:984859" CDS 2063638..2064219 /gene="leuD" /locus_tag="lmo1990" /EC_number="4.2.1.33" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D" /codon_start=1 /transl_table=11 /product="isopropylmalate isomerase small subunit" /protein_id="NP_465514.1" /db_xref="GeneID:984859" /translation="MEEIKVHIGKTVALMNDNIDTDQIIPKSFLKRIERTGFGEFLFD SWRYLPNRKPNPDFPLNALDRQEATILITGENFGCGSSREHAAWALLDYRFRVIIAGS YSDIFYMNCTKNGVLPIVLPREAREKLAKIAAEENVTIDLPNQQVISSVGTYPFEIDA TWKNKFINGLDDIAITFEHIDAIKAYEQKVDSI" misc_feature 2063638..2064204 /gene="leuD" /locus_tag="lmo1990" /note="3-isopropylmalate dehydratase small subunit; Region: leuD; PRK01641" /db_xref="CDD:179314" misc_feature 2063878..2063886 /gene="leuD" /locus_tag="lmo1990" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238809" regulatory 2064224..2064229 /regulatory_class="ribosome_binding_site" gene 2064238..2065506 /gene="ilvA" /locus_tag="lmo1991" /db_xref="GeneID:987960" CDS 2064238..2065506 /gene="ilvA" /locus_tag="lmo1991" /EC_number="4.3.1.19" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic" /codon_start=1 /transl_table=11 /product="threonine dehydratase" /protein_id="NP_465515.1" /db_xref="GeneID:987960" /translation="MELVDLLVTEEDVEKAYEVLKSVVKHTPLEYDFYLSEKYHCNVY LKREDLQRVRSFKLRGAFYAISRLSAEQLEKGVVCASAGNHAQGVAYTCKRMTVPATI FMPTTTPQQKVSQVKFFGGSNVEVVLVGDTFDASATAAKEFAAAHGQTFIPPFDDPDI IAGQGSLAVEMVKDLNKAHEQADYVFAGIGGGGLISGVATYLKAKSPITKIIGVEPDG APSMTAALKQNQVVTLDKIDKFVDGAAVKEVGSLTFQHAKVLVDEVTTVSEGAVCSTI LDMYTKQAIVAEPAGALSVAALETYREEIKDKTVVCIVSGGNNDINRMQEIEERSLLH EGLKHYFIVNFSQRPGALKEFVNDVLGPHDDITKFEYTKKVNRGNGPVIIGVLLQDKN DYEGLLDRVAAFDPSYIPINDNQTLYTLLV" misc_feature 2064247..2065503 /gene="ilvA" /locus_tag="lmo1991" /note="threonine dehydratase; Validated; Region: PRK08639" /db_xref="CDD:236318" regulatory 2065512..2065532 /regulatory_class="terminator" regulatory 2065685..2065690 /regulatory_class="ribosome_binding_site" gene 2065698..2066417 /locus_tag="lmo1992" /db_xref="GeneID:986230" CDS 2065698..2066417 /locus_tag="lmo1992" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alpha-acetolactate decarboxylase" /protein_id="NP_465516.1" /db_xref="GeneID:986230" /translation="MDAVRKNRLFQHSTMAALVGGLFSGTTSFKELLQHGDLGIGTLD QFDGELIILDGEAFQIRSDGQAYKVKPEDTTPYASTTFFDADTSFSVSEPTSKQAVEE KIAELVQGPNVFYAVKMTGNFRYVDTRVVPKQQRPYPPLIEAVKEQPTYHFEYITGTI VGFWTPAYISGIGVSGYHVHFIDDMRKIGGHVFDYEMLEGTVEVAQQTEFELQLPQTT EFLRSDLSTPDMLEQIEAAEN" misc_feature 2065716..2066411 /locus_tag="lmo1992" /note="alpha-acetolactate decarboxylase; Region: acetolac_decarb; TIGR01252" /db_xref="CDD:273524" regulatory 2066427..2066448 /regulatory_class="terminator" regulatory complement(2066427..2066448) /regulatory_class="terminator" gene complement(2066455..2067756) /gene="pdp" /locus_tag="lmo1993" /db_xref="GeneID:984377" CDS complement(2066455..2067756) /gene="pdp" /locus_tag="lmo1993" /EC_number="2.4.2.2" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway" /codon_start=1 /transl_table=11 /product="pyrimidine-nucleoside phosphorylase" /protein_id="NP_465517.1" /db_xref="GeneID:984377" /translation="MRMVDIISKKRDGKALSTEEIQFFIDGYTNGEIPDYQASALAMA IFFQDMNDQERADLTMAMVGSGDTIDLSEIEGIKVDKHSTGGVGDTTTLVLAPLVAAV GVPVAKMSGRGLGHTGGTIDKLESIEGFHIELDKKDFIDLVNRDKVAVIGQSGNLTPA DKKMYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKTDEDAENLA HAMVRIGNNVGRNTMAVISDMSQPLGEAIGNALEVKEAIDTLKGQGPEDLTELVLVLG SQMVVLAKQAETLDEARAKLIEVIENGAALEKFKTFLSNQGGDASIVDHPEKLPQAKY QIEVPAKTSGFVSQIVADEIGIAAMILGAGRATKEDEINLAVGLMLRKKVGDAVKEGE SLVTIFADQEDVENVKAKIYENIQISDHAIAPTLVHKVITE" misc_feature complement(2066458..2067756) /gene="pdp" /locus_tag="lmo1993" /note="pyrimidine-nucleoside phosphorylase; Reviewed; Region: PRK06078" /db_xref="CDD:180387" regulatory complement(2067764..2067769) /regulatory_class="ribosome_binding_site" gene complement(2067887..2068897) /locus_tag="lmo1994" /db_xref="GeneID:984855" CDS complement(2067887..2068897) /locus_tag="lmo1994" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="NP_465518.1" /db_xref="GeneID:984855" /translation="MAATIREIAEKTGVSITTISQILNGKGERFSDLTREKVLKTAKE MSYKPNFFAKNMIVSHTNTIGMIVPEVTDPFFSQMVKGAEDYLNKEGYMIMLCNSSND KEREDLYVEELLHRAVDGLIIASPNILLSGVIKRMEEKRSPYILLDRQRNPRQEGNIA IDDFKGGYMATEHLIELGHTRIGIIISDTSFYNVHERYEGYLACMKDYQLPVKDSWIV SGDQTMNGGYIATQKLLQENLSAIFATNDLMAMGTYRAALEKNLRIPHDLSVIGFDDI ELSEYMTPPLTTIRQPIYGIGEIAAELLLKNLQNPTEKLENRLLDISLIKRSSTKSID NQ" misc_feature complement(2068679..2068891) /locus_tag="lmo1994" /note="helix_turn _helix lactose operon repressor; Region: HTH_LACI; smart00354" /db_xref="CDD:197675" misc_feature complement(order(2068730..2068732,2068736..2068741, 2068748..2068750,2068757..2068759,2068796..2068798, 2068805..2068810,2068826..2068828,2068835..2068840, 2068844..2068858,2068880..2068882)) /locus_tag="lmo1994" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143331" misc_feature complement(2068730..2068759) /locus_tag="lmo1994" /note="domain linker motif [active]" /db_xref="CDD:143331" misc_feature complement(2067911..2068711) /locus_tag="lmo1994" /note="ligand-binding domain of putative DNA transcription regulators highly similar to that of the transcription regulator DegA; Region: PBP1_DegA_Like; cd19976" /db_xref="CDD:380631" misc_feature complement(order(2068043..2068045,2068121..2068126, 2068133..2068135,2068142..2068147,2068223..2068225, 2068547..2068552,2068559..2068564,2068604..2068621, 2068646..2068648,2068655..2068657,2068667..2068669, 2068709..2068711)) /locus_tag="lmo1994" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:380631" misc_feature complement(order(2068025..2068027,2068076..2068078, 2068307..2068309,2068316..2068318,2068454..2068456, 2068670..2068675)) /locus_tag="lmo1994" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:380631" regulatory complement(2068905..2068909) /regulatory_class="ribosome_binding_site" gene complement(2068977..2069648) /gene="dra" /locus_tag="lmo1995" /db_xref="GeneID:984581" CDS complement(2068977..2069648) /gene="dra" /locus_tag="lmo1995" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate" /codon_start=1 /transl_table=11 /product="deoxyribose-phosphate aldolase" /protein_id="NP_465519.1" /db_xref="GeneID:984581" /translation="MTIAKMIDHTALKPDTTKEQILTLTKEAREYGFASVCVNPTWVK LSAEQLAGAESVVCTVIGFPLGANTPEVKAFEVKDAIQNGAKEVDMVINIGALKDKDD ELVERDIRAVVDVAKGKALVKVIIETCLLTDEEKVRACEIAVKAGTDFVKTSTGFSTG GATAEDIALMRKTVGPNIGVKASGGVRTKEDVEKMIEAGATRIGASAGVAIVSGEKPA KPDNY" misc_feature complement(2069001..2069648) /gene="dra" /locus_tag="lmo1995" /note="Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism]; Region: DeoC; COG0274" /db_xref="CDD:440043" regulatory complement(2069656..2069661) /regulatory_class="ribosome_binding_site" gene complement(2069710..2070657) /locus_tag="lmo1996" /db_xref="GeneID:984762" CDS complement(2069710..2070657) /locus_tag="lmo1996" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DeoR family transcriptional regulator" /protein_id="NP_465520.1" /db_xref="GeneID:984762" /translation="MDKQKEQLSVEVARLYYQADLGQQEIATRLGVSRPTVSRLLQNA KTKGYVKIEVQDPFSNLTELAVALKEKYQLKNVTVAFSQTNDYSEITKQISQSAAEYL EEIIHDGDILGVSWGTTMYKIAQKLSPLKAEIKVVQLKGGVSHSDVNTYAAETLALFG AAYDTAPVSLPLPVVLDNPLAKQMVEADRHIKNIIELGKKANIAIFTVGTVRDEALLF RLGYFSDQEKARLKEKAVGDICSRFFTIDGEIADEKMDERTIGINLQELKQKETAILV AGGERKIKAIHGALRGGYANHFITDQFTAKQLLEQNFIN" misc_feature complement(2069728..2070627) /locus_tag="lmo1996" /note="DNA-binding transcriptional regulator LsrR, DeoR family [Transcription]; Region: DeoR; COG2390" /db_xref="CDD:441955" regulatory complement(2070664..2070669) /regulatory_class="ribosome_binding_site" regulatory complement(2070729..2070744) /regulatory_class="terminator" gene complement(2070754..2071170) /locus_tag="lmo1997" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984854" CDS complement(2070754..2071170) /locus_tag="lmo1997" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannose transporter subunit IIA" /protein_id="NP_465521.1" /db_xref="GeneID:984854" /translation="MKAIFVCTHGNAAKELIQSAEMICGKQENTSFVPFEVNESAENL QVKIASEVAKLDLTEGVLFLTDLKGGTPFNVLVRLLGNFDAVELVAGVNIPLLLEAFL SRETLSLKQLANQVAETGRLGIYEYAAPLEEIEEDF" misc_feature complement(2070799..2071161) /locus_tag="lmo1997" /note="Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]; Region: ManX; COG2893" /db_xref="CDD:442138" regulatory complement(2071179..2071184) /regulatory_class="ribosome_binding_site" gene complement(2071187..2072182) /locus_tag="lmo1998" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987959" CDS complement(2071187..2072182) /locus_tag="lmo1998" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="opine catabolism protein" /protein_id="NP_465522.1" /db_xref="GeneID:987959" /translation="MLKFDEQKVRENMEGALKLRPQINEVVDQIHHRGFSNICWLGIG GTYASAMQAVVHMKEKTALETFYENAAVFLTTGNKRVTKDTLVVISSVTGSTQEVVDA VKKCNEIGATIFGFIDKAETELANLVDHLISYPLNEQLKFFMVADRFMYLAGEFEDYG AFYQEMDQHFAKGIVEVEKAADKFGQEFALKHHQDDIHYFVGAGNQWGATYSYAMCYW EEQHWIKTKSIESHEFFHGMFEIVERDTPITIYVTEDSQRSLSERVVNFIPQICANYT VIDAKDYDMPGISAKFRGALSPFIIHAVNNRIDVHVEKINCHPMEIRRYYRQLDY" misc_feature complement(2071283..2072128) /locus_tag="lmo1998" /note="Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain [Cell wall/membrane/envelope biogenesis]; Region: AgaS; COG2222" /db_xref="CDD:441824" misc_feature complement(2071733..2072074) /locus_tag="lmo1998" /note="A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars; Region: SIS_1; cd05710" /db_xref="CDD:240214" misc_feature complement(order(2071910..2071912,2072045..2072047)) /locus_tag="lmo1998" /note="putative active site [active]" /db_xref="CDD:240214" regulatory complement(2072191..2072196) /regulatory_class="ribosome_binding_site" gene complement(2072205..2073269) /locus_tag="lmo1999" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984760" CDS complement(2072205..2073269) /locus_tag="lmo1999" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465523.1" /db_xref="GeneID:984760" /translation="MKNMDYYIRSEQSVYENIIRSRKDLLQKVIQMEKVDYQAIVIFA TGSSSNAAFAAQLYMSDKLAIPVYVEEPSTAGNYMLHLNKNTLYIAISQGGHSYSTIH LVKEIERQGGIVFTLTSDLRSPIAKESTRAIDLGMGLEEMPYVTLGYSATILMLNLMA LELALLQEKILEEEYQAEIAELKKITAHLPQVIEKSAAWVDEHTQELMEAERVFFIGY GAAYGVAREGETKVTETIRITSFGKELEEYMHGPYIGLSERDYIIFLEPQGLLEDRAE KLKQFLQGHVKKIRTIYADAGGENADDLLLGMRTAELLTPLFMTIPVHLLSFEISKKK GINLEVSAFPEFDKITKSKI" misc_feature complement(2072259..2073152) /locus_tag="lmo1999" /note="Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain [Cell wall/membrane/envelope biogenesis]; Region: AgaS; COG2222" /db_xref="CDD:441824" regulatory complement(2073277..2073282) /regulatory_class="ribosome_binding_site" gene complement(2073282..2074103) /locus_tag="lmo2000" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984850" CDS complement(2073282..2074103) /locus_tag="lmo2000" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannose transporter subunit IID" /protein_id="NP_465524.1" /db_xref="GeneID:984850" /translation="MKMKSSDVLTKKDLMKVFWRSFTMEWSWNYERQSNLGYGFSMLP ALNKIFKNDKDKRISSYQRHLEFYNVTPWLSTFPLGISIAMEEQSAKDKDFDTDSINN IKVALMGPLSGIGDSFFWGTLRVIATGIGTSLALQGNMLGPILFLLIFNIPAILTRYY GLFIGYNIGANFIEKIQKTGLMDKLSYGASVIGLAVVGAMVATMVNINMPMKFGSGDD AVTIQSVFDGIVPGILALGFTFFIFWLDKKGLKAHWILLLIAGIGILGAFTGLLK" misc_feature complement(2073285..2074097) /locus_tag="lmo2000" /note="Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IID component [Carbohydrate transport and metabolism]; Region: ManZ; COG3716" /db_xref="CDD:442930" gene complement(2074084..2074902) /locus_tag="lmo2001" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987965" CDS complement(2074084..2074902) /locus_tag="lmo2001" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannose transporter subunit IIC" /protein_id="NP_465525.1" /db_xref="GeneID:987965" /translation="MEQFGTAILLALAAMLANGEYLFGSSMLSRPLVTCTLAGLIMGD VQMGIIMGATLELAFVGSFSIGASIPPEIISGSILGTAFAISTGESTAVALALGIPIA SLVLVVKNLCFIFVLPYFVHKADKYALEGNSRGISRMQLLGGFLSINLPIGIIVATSY LVGSPVIQNVLDAIPAFVITGLGIATGLLPAYGFALLLKLMVNKKNAVFFVFGFALAV YLKVPVTGVAIFAACLALILTGYATLKNDNGPKNTNTEPALANDGGINYEDEEF" misc_feature complement(2074135..2074845) /locus_tag="lmo2001" /note="Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific IIC component [Carbohydrate transport and metabolism]; Region: ManY; COG3715" /db_xref="CDD:442929" regulatory complement(2074112..2074117) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2001" regulatory complement(2074911..2074916) /regulatory_class="ribosome_binding_site" gene complement(2074925..2075392) /locus_tag="lmo2002" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984415" CDS complement(2074925..2075392) /locus_tag="lmo2002" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannose transporter subunit IIB" /protein_id="NP_465526.1" /db_xref="GeneID:984415" /translation="MIQFLRVDHRLLHGQVAVSWFNALDVNTILVANDGVAADDFRKS AIRLAKPEAAKLVMKSIDESIEAINSGVTDKYNMLIVVESVEDAYKLIHGTNGKIPML NLGGTKQREGTANFSKAVNLTPEEVEKLKELQKEKVDVFMQQVPNEKKVTFEA" misc_feature complement(2074934..2075389) /locus_tag="lmo2002" /note="PTS_IIB, PTS system, Mannose/sorbose specific IIB subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family...; Region: PTS_IIB_man; cd00001" /db_xref="CDD:237975" misc_feature complement(order(2075354..2075356,2075363..2075365, 2075375..2075377)) /locus_tag="lmo2002" /note="active site" /db_xref="CDD:237975" misc_feature complement(2075354..2075356) /locus_tag="lmo2002" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:237975" regulatory complement(2075401..2075406) /regulatory_class="ribosome_binding_site" gene complement(2075412..2076113) /locus_tag="lmo2003" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984849" CDS complement(2075412..2076113) /locus_tag="lmo2003" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="NP_465527.1" /db_xref="GeneID:984849" /translation="MGAKKPLFEVIASEIKDSINRDEYKTGMLMPNETALQEIFSSSR TTIRRAVDLLVEEGLVVRKNGVGLYVQPKLTSQNILEMTGVMKTDTNENLKKDIKDFY IRKAGKFYAEKFGIKENELVYSIKFVQKSENGVTLDRLILPLSLYPDLQAKDFQIINI IELVNSGKYKLFELEQELQLILAGNEQIKNMHINENDPVFKLSSVFYAENEMPIAIQY HYEDAESTKYVVDFN" misc_feature complement(2075415..2076107) /locus_tag="lmo2003" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: MngR; COG2188" /db_xref="CDD:441791" gene complement(2076115..2076846) /locus_tag="lmo2004" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987958" CDS complement(2076115..2076846) /locus_tag="lmo2004" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="NP_465528.1" /db_xref="GeneID:987958" /translation="MEYKDLSPAVQSEEQLRQLIQEKVAAGETSFPSERALENELGVS RTTLRRSLDTLEKEAVIQKRNRKGIEINQKQTINILQMNSMSSQLPGEQKVEVMSQEI VAGKDEVNHFLNLSEEKPVFKLVRRRIVDNKPFSYEISFIDSTRFAGIEKIDLNNSLL YNVLEKQFAIKPTYGREELRYVSANEKLAEALKVPLNTPLFEVVSKAFDQNDEPFEYS KQYLIGNQIKYKINAKNIFDYLEDE" misc_feature complement(2076145..2076807) /locus_tag="lmo2004" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: MngR; COG2188" /db_xref="CDD:441791" regulatory complement(2076123..2076128) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2004" regulatory complement(2076854..2076859) /regulatory_class="ribosome_binding_site" regulatory complement(2076978..2077009) /regulatory_class="terminator" gene complement(2077019..2078014) /locus_tag="lmo2005" /db_xref="GeneID:987954" CDS complement(2077019..2078014) /locus_tag="lmo2005" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_465529.1" /db_xref="GeneID:987954" /translation="MKYVKFGNTGMDVSKICLGTMGFGDKDKWIHKWVLDEANSRPII KKALDLGINFFDTANIYSYGESEKIVGRALKDYANRDDIVLATKVQQTMRPDRPNSGG LSRKTILSEIDHSLKRLETDYVDLYIIHRFDENTPIEETMEALHDVVKSGKARYIGAS AMYAWQFQKAQRVAERNGWTKFVSMQNHYNMIYREEEREMIPFCRDEKIAITPYSPLA SGRLTRDLNETTDRSETDPVQKSKYDDMMNADKGIIERVAELAETHQVSRDKIALAWL LNKDEITSPIIGAQKESHLESAVEALNIKLTTSEVNYLEELYIPHPVVGALPTTK" misc_feature complement(2077070..2078011) /locus_tag="lmo2005" /note="Escherichia coli YajO and similar proteins; Region: AKR_EcYajO-like; cd19079" /db_xref="CDD:381305" misc_feature complement(order(2077121..2077126,2077133..2077135, 2077142..2077159,2077208..2077210,2077355..2077375, 2077457..2077459,2077532..2077537,2077622..2077627, 2077751..2077753,2077832..2077834,2077847..2077849, 2077952..2077960)) /locus_tag="lmo2005" /note="putative active site [active]" /db_xref="CDD:381305" misc_feature complement(order(2077625..2077627,2077751..2077753, 2077832..2077834,2077847..2077849)) /locus_tag="lmo2005" /note="catalytic tetrad [active]" /db_xref="CDD:381305" regulatory complement(2078022..2078027) /regulatory_class="ribosome_binding_site" regulatory complement(2078100..2078120) /regulatory_class="terminator" gene complement(2078132..2079829) /gene="alsS" /locus_tag="lmo2006" /db_xref="GeneID:987957" CDS complement(2078132..2079829) /gene="alsS" /locus_tag="lmo2006" /EC_number="2.2.1.6" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 2-acetolactate from pyruvate in stationary phase" /codon_start=1 /transl_table=11 /product="acetolactate synthase" /protein_id="NP_465530.1" /db_xref="GeneID:987957" /translation="MAKLEKDQEKVITQGKSGADLVVDSLINQGVTHVFGIPGAKIDK VFDVMEERGPELIVSRHEQNAAFMAAAIGRLTGKPGVVLVTSGPGASNLATGLVTATA EGDPVVAIAGNVTRQDRLKRTHQSMDNAALFRPITKYSEEVVHAESIPEAITNAFRSA TEPNQGAAFVSLPQDIVNEPNVPVKAIRPLAKPENGPASKEQVAKLVTRLKKAKLPVL LLGMRASSPEVTGAIRRLLQKTSIPVVETFQAAGVISRDLEDNFFGRVGLFRNQPGDI LLNKADLVITVGYDPIEYDPKAWNASGDRTIVHLDDIRADIDHYYQPVTELVGNIALT LDRVNAKFSGLELAEKELETLKELHAQLEERDVPPESDETNRVHPLSVIQTLRSAIDD NVTVTVDVGSHYIWMARHFRSYEPRRLLFSNGMQTLGVALPWGIAATLVHPGEKVVSI SGDGGFLFSAMELETAVRLRAPLVHLVWNDGSYDMVAFQQKMKYGKEAAVRFGDVDIV KFAESFGAKGLRVTNPAELSDVLKEALETEGPVVVDIPIDYRDNIKLGETLLPDQFY" misc_feature complement(2078138..2079796) /gene="alsS" /locus_tag="lmo2006" /note="acetolactate synthase AlsS; Region: PRK08617" /db_xref="CDD:236312" regulatory complement(2079836..2079841) /regulatory_class="ribosome_binding_site" regulatory complement(2079997..2080015) /regulatory_class="terminator" gene complement(2080027..2081484) /locus_tag="lmo2007" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987956" CDS complement(2080027..2081484) /locus_tag="lmo2007" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465531.1" /db_xref="GeneID:987956" /translation="MKKKWGVIIASLCLLLGLSACGSDEKADANEVPTLKWYMIGTPQ KDTEEVMKEVNKYTEEKIGVKVEMTQIDWGDYGKRMQTVINSGENFDIAYSAAGEFVS YSQKGAFLPLNKYLDKEGKKMKAELNDVLWEGATIDGNIYGVPSNKEVGEQQVYVFNK NLVDKYKMDVTKVKNFSDLEPMLKTIKENEPSITPIGGNKDFKPAFPYDYLIDNAVPL PFAVNQYEDTGKIVNFYEQPETLDILKSLHSFYQKGYVTKDIATSTDPWSYDKENWFV RIEKYQPYAENIWDKNTGGKYKVVTQPIAETPIIKNNSVTGAIQAVSVTSQHPEEAVK FLDLLNTDEYLRNLVDKGIEGTHYKELDDGKIQDLPARVERYSMPTYALGNHFILKLY EDEPADKWDQFKEFNKKSVASPGLGFYFDSSKVRTEIASITNVCNEFAPALLTGTVDP VEYTEKFKAKLNDAGMKKVMKEMQKQYDEYRASQE" misc_feature complement(2080453..2081484) /locus_tag="lmo2007" /note="ABC-type glycerol-3-phosphate transport system, periplasmic component [Carbohydrate transport and metabolism]; Region: UgpB; COG1653" /db_xref="CDD:441259" misc_feature complement(2080039..2080431) /locus_tag="lmo2007" /note="Domain of unknown function (DUF3502); Region: DUF3502; pfam12010" /db_xref="CDD:463429" regulatory complement(2081492..2081497) /regulatory_class="ribosome_binding_site" gene complement(2081505..2082476) /locus_tag="lmo2008" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985318" CDS complement(2081505..2082476) /locus_tag="lmo2008" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_465532.1" /db_xref="GeneID:985318" /translation="MAEQLEAVSEIEQVRGEMEKPAKNKPAKDIIGFGKKMNVAMNIM LAFLALICIFPFLYIIVISFSSESSLAANGFQLIPKEWSMEAYEYLWKMKGQLLQSYG ITILVTVIGTVCSVAMIALYSYAISRPQFKYRRQFTFIAFFTMLFSGGMVPAYIVMTQ FLHLRNSIWAMILPLAMNAFYIMIMRTFFLRSIPEPILEAARIEGAGELRIFLQMVVP LSLPGLATIALFSTLGYWNDWFQASLYIDNPNLVPLQSLLMKIENNLEFMRQNSEIAY TAGAFKSIPQDGAKMAMVVISTLPIAITYPFFQKYFISGLTIGGVKE" misc_feature complement(2081508..2082365) /locus_tag="lmo2008" /note="ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpE; COG0395" /db_xref="CDD:440164" regulatory complement(2082486..2082491) /regulatory_class="ribosome_binding_site" gene complement(2082495..2083424) /locus_tag="lmo2009" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984845" CDS complement(2082495..2083424) /locus_tag="lmo2009" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_465533.1" /db_xref="GeneID:984845" /translation="MKKVLSQIRANRIWLLMVLPGVLWFLVFSYLPMFGTVIAFKDYK IDGKGFLSSIMSSDWVGLENFKFLFQTNDAFIITRNTVLYNLVFIIVGLFLGVALAII FNSLLNKRGAKIYQTGMLFPHFLSWVVVSYFLFSFLSEDSGLMNNILLAFGQDPVSWY NDPKYWPFILIMMNVWKGLGYGSIVYLAAIAGIDRTYYEAAMIDGAGKWQQIRHVTIP ALTPLMVILTILNVGKIFNSDFGLFYQLPRNSGPLYPVTDVIDTYVYRGLTSLGDMSM SAAAGFYQSIVGFILVLLTNYIVKKINPEYGLF" misc_feature complement(2082498..2083421) /locus_tag="lmo2009" /note="ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]; Region: LplB; COG4209" /db_xref="CDD:443357" regulatory complement(2083432..2083437) /regulatory_class="ribosome_binding_site" gene complement(2083537..2085021) /locus_tag="lmo2010" /db_xref="GeneID:984844" CDS complement(2083537..2085021) /locus_tag="lmo2010" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_465534.1" /db_xref="GeneID:984844" /translation="MLKIVLVDDEPLILKGLESIIPEFEQSIEIIGTAKNGAVALDLF ANQEVDVLLTDIEMPVMNGLELIDEWKKRQPATKTIVLSGFEDFHYVKRGLSAGIENY LLKPLNEQELKETLIQIEKKQMTDSVIPREEAYYILRDNTIWRWLNLRINKEEWEERL ALYDMALNPKENAVLIQIQATKEIDLAEWKNLSEQYRKDFSFMLLTPENEIIVGITEQ TSISEQILAIHQDMKKRISNEAFYLFISEKVQGEMMYPQAFRQLTRLLPERLVQEPGS LIAYQKRTKHTWRPKRKQHQLAKLLVMNNEKEIKAWINNFFKEWNDHKLESDPHQMLH ILNELLVMMAESDPKELSESMGRIAEETSIEGLEEATLAYAIRYYNRKKQTDESKSPI IQNVLSYITEHFAEGMSLKTLGNDFHINAVYLGQLFQKEMGEHFTDYLNRYRVNYAKE ELLQTKDNLTIIAGKSGYTDMAYFYRQFKKHTGETPNRYRKIHQ" misc_feature complement(2084656..2085012) /locus_tag="lmo2010" /note="phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators; Region: REC_YesN-like; cd17536" /db_xref="CDD:381091" misc_feature complement(order(2084701..2084706,2084962..2084964, 2084971..2084979,2084986..2084997)) /locus_tag="lmo2010" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:381091" misc_feature complement(2083540..>2083824) /locus_tag="lmo2010" /note="AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; Region: AraC; COG2207" /db_xref="CDD:441809" gene complement(2085021..2086760) /locus_tag="lmo2011" /db_xref="GeneID:987955" CDS complement(2085021..2086760) /locus_tag="lmo2011" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component sensor histidine kinase" /protein_id="NP_465535.1" /db_xref="GeneID:987955" /translation="MSMAQELPRKRVFKRMLLIFSLTSLFTVSLLLFFIYKYYTNIQL DTNLQRAETIANKQLDALTEKQKALISLTQDIYRNSDLMQDVQIAMTNDYGSYTEQNI DNYFKSKNFYSVDMQTYLQSYFSYDEDIIALQLISDDGSYSYTFPSRYREWKETVDTY GEENIATEASKQGTFYTIENKIVVKQPINDPSTLKQMGYLLLYIDPTFLSKWVTKDYQ NSIFQINNAKGAELYSNHPTKQIQTPEKQGWINVDNKKIYFQKTEDETSGLKNNTFLY RVTDDSAPLIELTLFGIGLLLVIFSISINFVISRRYSKRILTIIGGMNRVEKGTLDAK LPVDNNGDELTMISERFNHMTENLDAYVKKVYSLEMEEQKARLKALQGQMQPHFLYNS LEAIRMNARVEGAKATSDMIYQLATLLRYTANHREITTLGEEINYVKQYVRFMEMRHE QPIKLEINIEKRFNHTQIPRFALQPLIENFFKYAYKENQNPIVVITVTAENNNLQFRI EDNGSGIDAEKLKEVQATIESKDDTSHIGLANLNKRLQLLYGETYRLTIKSKANEGTI ILFQVPQNTGGEK" misc_feature complement(2085045..>2085893) /locus_tag="lmo2011" /note="Sensor histidine kinase YesM [Signal transduction mechanisms]; Region: YesM; COG2972" /db_xref="CDD:442211" regulatory complement(2085031..2085036) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2011" regulatory complement(2086767..2086772) /regulatory_class="ribosome_binding_site" gene complement(2086817..2087428) /locus_tag="lmo2012" /db_xref="GeneID:987952" CDS complement(2086817..2087428) /locus_tag="lmo2012" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465536.1" /db_xref="GeneID:987952" /translation="MKLIDKFSVISDWIIRLVWTNLVWLFLVLIGGIVFGFMPATVAL FTITRKWARGDLDTPVWKSAWQTYKQVFVSANLAGGVFALIGIFLYADLRIVFELMQG FWSTILYFFLMFLLFLVGIAFLQYFTVFVHFQMKNVRAYVGQAFLLAITSFKNTFMIV IGLVFCAWLISKMPAFILFISGVLPSYWIMKINLHRFKQMEPK" misc_feature complement(2086820..2087428) /locus_tag="lmo2012" /note="Uncharacterized membrane protein YesL [Function unknown]; Region: YesL; COG5578" /db_xref="CDD:444317" regulatory complement(2087437..2087442) /regulatory_class="ribosome_binding_site" gene complement(2087489..2088793) /locus_tag="lmo2013" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986399" CDS complement(2087489..2088793) /locus_tag="lmo2013" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465537.1" /db_xref="GeneID:986399" /translation="MTNKVPASFNKWIEKVKTTFPENEKLHRMFEKCFTNTYTTTLQE TEEGLPFVITGDIPAMWLRDSTSQIRPYLIVAEEDEEMATVIENLVKLQTKCILHDPY ANAFNKSANGAGFQNDKTAMTNLVWERKYEIDSLCYPIQLAYLLWKSTNRTGHFTEEF RKALHQIIEVFKIEQKHTEQSPYRFERENVRQSDTLNNNGKGTDVSYTGMSWSGFRPS DDACMYGYLVPSNMFLVVVMDYVQEIAATFYPEDKELPKESSDLRKEVAAGIETYAKQ VHPYYGDVYAYEVDGTGRKLFMDDANVPSLLAATYLGFCEKTDPAYQATRKLILSREN PYFVEGSVLTGIGSPHTPDHYVWPIALSIEGLTAETEAEKQAILEMLIAGDGGTDYMH EGVNASNPAEFTRDWFAWSNAMFSEFVLSLCGVYVKGSPLSK" misc_feature complement(2087516..2088793) /locus_tag="lmo2013" /note="Meiotically up-regulated gene 157 (Mug157) protein (function unknown) [Function unknown]; Region: COG3538" /db_xref="CDD:442759" gene complement(2088797..2091454) /locus_tag="lmo2014" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984835" CDS complement(2088797..2091454) /locus_tag="lmo2014" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar hydrolase" /protein_id="NP_465538.1" /db_xref="GeneID:984835" /translation="MTRKKAHIISHSHWDREWFLPLESLRFRLVTLMDEVEALLDKED GFHHFHMDGQMIMLEDYLAVKPAKKEKMKQLVADGKLRIGPWYMLQDAFLTSGEANIR NLQYGLEMAEEFGQAEKIGYFPDTFGLYGQVPQLMRQAGFDTVVFGRGVNPTGFNNQV FDSAFASKYSEMFWESPDGSKVLGILLANWYSNGNEIPVDKEAAKVFWDKKLADVERF ASTDEWLFMNGCDHQPVQTDLAEALEVARELYPDVKFIHSHFEKYQEAVKAGLEPGKL QTVHGELTSQQSDGWSTLANTASSRIYLKQANAKIERLLERLAEPISVMGTEAGVQYP HEYLAYAWKLLMENQIHDSITGCSLDEVHREMEARFEKVEQTTMAIIQNAARRITEQI ATNETGIPLTVFHAGGIEATRTVELEIETDAIHFSEMHFELIPDELAKLPEQSFRLET STGEEIPVVVESLGIRFNYDLPERKFRDSYFARKYKLTFAVENLPAVGYETIYAHSVD LVNESANQTQDFSLENRFLKVEVAANGTYTILDKETSVEVSGVGAYEDVGDIGNEYMF KETGDNLRINTLNSKPAIRVLREDKLGKTIEINHEIEIPESASATFAEEKRRLVWHPD RQSERSENFTTFKITTELTLNKHDKQLTIRVKLNNNVDDHRLRVLFPTGKQTETHQAG SVFEVVTRANKQVKEWTNPAKDNRKQGFVASGNIVVASLGLPEYEVSEHGDKLELTLL RAVSEIGDWGDFPAYEAECHREITAEFHLFLTDDSDVANSSIPVQVNARLTPIFAFQH KSATKEKILAENRDFAEWETEDGFVFSAFKIAKDNQPIIRFYQTASEPKLLTTERPWQ KSTILEETTGDAKKQFTASPNEIITLKGV" misc_feature complement(2088806..2091454) /locus_tag="lmo2014" /note="Alpha-mannosidase [Carbohydrate transport and metabolism]; Region: MngB; COG0383" /db_xref="CDD:440152" regulatory complement(2088801..2088806) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2014" regulatory complement(2091461..2091466) /regulatory_class="ribosome_binding_site" regulatory 2091689..2091694 /regulatory_class="ribosome_binding_site" gene 2091698..2094808 /locus_tag="lmo2015" /db_xref="GeneID:984770" CDS 2091698..2094808 /locus_tag="lmo2015" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alpha-mannosidase" /protein_id="NP_465539.1" /db_xref="GeneID:984770" /translation="MSIHMFFTKDKLRGRLDEVALYRYEKTYPIRNFQTAEDMDGEIA ARPDNILYDNELTIGENWSGRDRYVWLKTTITFPDTKTGTRLIGYFDFGNTGDGHNSG FESLLFVNGEPYQGVDQNHREVLFPDSFAGKTIELVFRLWSGLEGGGTPTIQTHQLKE AFIGYLNLMIDDLYFTSKATLKTLDQLEEKNPTYAPLLQAINRAYLAIDWSTPGSIQN LISMETANQNLQAALKKIPKNFPIKVAAVGHTHIDVAWLWRLKHTREKAARSFSTVLH LMEDYPEYLFLQSQPQLYAYIKEDYPEIYAKIKAKISEGNWEADGGMWLEADCNIPSG ESLVRQMLYGQKFLREEFGKPSSFLWLPDVFGYSWALPQILRKSGIKTFMTTKISWNQ YNRMPHDTFQWRGMDGTEILTHFITAPEKNSRISTYNGKMTARELVGLWDKYQDKEVN QELLLAYGYGDGGGGVNREMLEMRRRYDAMPGIPEVKPKSATTYFNDLHETINATDQY VHTWNGELYFEYHRGTYTSQAFTKKMNRKIELGLRNSEWLSVLANLKQGITYPTEKLA GIWQILLRNQFHDIIPGSSIKEVYDDALIEYTEAMTENNVLISKQLASLTRAAEEKIT LWNSSTWTRPRYIEISPENPADHLAFYDENNILLPAQKLVNNTWLIQHPNLPVLGAAT ISVKETPNILGQSSFNYNNKQLETPFYQIKWNEVGQFTSIFDKKNNRQVLAENTRGNV FQLFEDKPMWHDAWDIDLFYQEKQNEITALDSVEITEKGPLQFTMKQVLHSEKSQITQ WIHFYHESPEIRFETEVDWRDRNQLLKVAFPVDVHASEASYDIQFGNVKRPTHWNTSW DYARFETVGHQWADLSEKNYGVSLLNDSKYGYDIKDSTIRLTLLKAAGYPDPDADLGI HQFTYSLYPHQGDFLDGETVQAAWELNNPIFTSNGEIETFSLFQVTNPYVMIDSVKQA EDGNGFILRLHEFAGTHGEVTFNSDYTITSITECNLLEENETSLPTPTFTIAPFEIKT YRIHLA" misc_feature 2092421..2094802 /locus_tag="lmo2015" /note="Alpha-mannosidase [Carbohydrate transport and metabolism]; Region: MngB; COG0383" /db_xref="CDD:440152" regulatory 2094814..2094851 /regulatory_class="terminator" regulatory complement(2094814..2094851) /regulatory_class="terminator" gene complement(2094877..2095077) /gene="cspB" /locus_tag="lmo2016" /db_xref="GeneID:985343" CDS complement(2094877..2095077) /gene="cspB" /locus_tag="lmo2016" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cold-shock protein" /protein_id="NP_465540.1" /db_xref="GeneID:985343" /translation="MQTGTVKWFNSEKGFGFIEVEGGDDVFVHFSAIEGEGFKTLDEG QSVEFEIVEGQRGPQAEKVTKL" misc_feature complement(2094880..2095077) /gene="cspB" /locus_tag="lmo2016" /note="Cold shock protein, CspA family [Transcription]; Region: CspC; COG1278" /db_xref="CDD:440889" regulatory complement(2095088..2095093) /regulatory_class="ribosome_binding_site" gene complement(2095366..2096061) /locus_tag="lmo2017" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987951" CDS complement(2095366..2096061) /locus_tag="lmo2017" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465541.1" /db_xref="GeneID:987951" /translation="MNTNRKKATPLFVIGGFCLILFITIASAIATESNWVARFDLSWI EKIRSGIQPDKTAIVKFLTTLGSAETTIILTIVVVLILFFLRKFVVGLWFGGTMLVCG VVLNLVLKSLVGRTRPASVNWLVSESGFSFPSGHATATAVFYGLAAMFLIFTVPKMWQ KIVIGIIGYGFILFVMYTRVYLGVHFPTDVLGGFFLGTASVFISLGVYFLVRKPLHNL LVKWRIKDKSITE" misc_feature complement(2095432..2095980) /locus_tag="lmo2017" /note="PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase; Region: PAP2_like_2; cd03392" /db_xref="CDD:239486" misc_feature complement(order(2095495..2095497,2095507..2095509, 2095525..2095527,2095654..2095662,2095711..2095713, 2095732..2095734)) /locus_tag="lmo2017" /note="active site" /db_xref="CDD:239486" regulatory complement(2096067..2096072) /regulatory_class="ribosome_binding_site" gene complement(2096075..2097064) /gene="dapF" /locus_tag="lmo2018" /db_xref="GeneID:985823" CDS complement(2096075..2097064) /gene="dapF" /locus_tag="lmo2018" /EC_number="5.1.1.7" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate" /codon_start=1 /transl_table=11 /product="diaminopimelate epimerase" /protein_id="NP_465542.1" /db_xref="GeneID:985823" /translation="MATIHFTKVHGSQNDFFLVDEEGNQIMDWSDAKRADFAIKLCDR EHSLGGADGILYVTKSSEAGPIGQMRVVNSDGSIASMCGNGLRTVARYLLEKHALTEA KVETMKAILDVKKATSLGFDIPTYQVEISPVKFNAESLPMNVGVEKLFNQVVPELDAE LAFSAVSVPNPHLITFVDQTVLDSDRQETLASYLNSENPYFPDGVNVSFVKRLSDDAI YVRTFERGVGFTNACGTAMSACSLIKKMLDKDTFETPLNVYNDGGRVQVTAKKDEAGD ISLQLIGNATFVSTGSVSYESDTVTELTNEATPEQAQYQELVKEVKEFLKTTE" misc_feature complement(2096177..2097058) /gene="dapF" /locus_tag="lmo2018" /note="Diaminopimelate epimerase [Amino acid transport and metabolism]; Region: DapF; COG0253" /db_xref="CDD:440023" regulatory complement(2097077..2097082) /regulatory_class="ribosome_binding_site" regulatory complement(2097127..2097170) /regulatory_class="terminator" gene complement(2097176..2099941) /gene="ileS" /locus_tag="lmo2019" /db_xref="GeneID:986874" CDS complement(2097176..2099941) /gene="ileS" /locus_tag="lmo2019" /EC_number="6.1.1.5" /experiment="EXISTENCE:[PMID:19448609]" /note="IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)" /codon_start=1 /transl_table=11 /product="isoleucyl-tRNA synthetase" /protein_id="NP_465543.1" /db_xref="GeneID:986874" /translation="MEYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKN AGRPTYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIE TAIAKKGVKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYE AEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQDKTSASIFVAFKVTDGK GVLDEGTNIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALLPSLREKLG FEDATVVKTVRGSELDRVVTKHPFYDRDSLVMNGEHATAEAGTGAVHTAPGHGEDDFL IGKKYDLEILAPLDDRGVFTEEAPGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSY PHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWV ISRQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTH PGSPNGEFTKETDIMDVWFDSGSSHQAVLNARPELSRPADLYMEGSDQYRGWFNSSLT TAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVD YQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMLIK LNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQ TVFYEAVVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDLPDVKVLANSEEITAKW DAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVDGEAKTLFDSLEGDFAQLFIVSD FELVEGLENAPESAFKSNQVAVQITVAEGETCERCRVVKKDVGVNPKHPTLCGRCADI VVKHYEA" misc_feature complement(2097197..2099935) /gene="ileS" /locus_tag="lmo2019" /note="Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: IleS; COG0060" /db_xref="CDD:439830" regulatory complement(2099949..2099954) /regulatory_class="ribosome_binding_site" gene 2100001..2100227 /locus_tag="lmos77" /db_xref="GeneID:18245162" misc_RNA 2100001..2100227 /locus_tag="lmos77" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245162" gene complement(2100224..2100751) /gene="divIVA" /locus_tag="lmo2020" /db_xref="GeneID:984838" CDS complement(2100224..2100751) /gene="divIVA" /locus_tag="lmo2020" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="chemotaxis protein CheY" /protein_id="NP_465544.1" /db_xref="GeneID:984838" /translation="MPLSPLDIHNKEFTRGFRGYDEDEVNDFLDQIIKDYEQVIKEKK RIEDTLNNSEERLGHFTNIEETLNKSLIVAQTAAEEVKASAEKEAKLIIREAEKNADR ILSDSLSKARKIAIEIEDLKRQSKVFRERLRMLVEAQMDLIKSEDWQQMMAYDVDATE LASIKEVESAESEER" misc_feature complement(2100353..2100745) /gene="divIVA" /locus_tag="lmo2020" /note="DivIVA protein; Region: DivIVA; pfam05103" /db_xref="CDD:428304" regulatory complement(2100760..2100765) /regulatory_class="ribosome_binding_site" gene complement(2100845..2101366) /locus_tag="lmo2021" /db_xref="GeneID:984837" CDS complement(2100845..2101366) /locus_tag="lmo2021" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465545.1" /db_xref="GeneID:984837" /translation="MKKILGNTRRQLILKWLKEAETPISGNQLASKTNVSRQVIVQDI SLLKAGNEPIMATPQGYIYAKETSFAGERRVIAVKHTKEQAVEELNILVDHGVSVVDV IVDHPIYGEITASLHLKSRFDVEKFIKKVQTTGATMLSGLTDGTHLHTIEADTKEQLE QAIEALEKAGFLI" misc_feature complement(2100848..2101357) /locus_tag="lmo2021" /note="Transcriptional regulator of NAD metabolism, contains HTH and 3H domains [Transcription, Coenzyme transport and metabolism]; Region: NiaR; COG1827" /db_xref="CDD:441432" gene complement(2101371..2102477) /locus_tag="lmo2022" /db_xref="GeneID:987950" CDS complement(2101371..2102477) /locus_tag="lmo2022" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carbon-sulfur lyase" /protein_id="NP_465546.1" /db_xref="GeneID:987950" /translation="MIYFDHAATTKMSEAALEVFMSASREFFANSESLHDAGTKSAAL LEKCRGSFAEILHVPSRGIMFTSGGTESNQIAIQTLLHSTKKKEVLVSPLEHASVWQQ LEALEEAGACWLRLLPVDAFGRVDPAVLSDMISPDTGLVIIQHVNSEIGSIQPIRELA HIAKQAGVYFHTDIVQSFGKLDLTLDDVTSFSISSHKIYGPKGAGLLFIKPDVPMQVP LPNVHHEFGFRPGTVNVPAIAAFTTAAYDIMGNREKEARRIAELKKAICEALTAKVKV EGGLNTSPFILGITLPNMQGQEALLALNEADIQISTTSACSLRDPAPSRTLLATGKTI EEASRFIRLSFGRENELSDSLIFKKELDKLLRKR" misc_feature complement(2101377..2102477) /locus_tag="lmo2022" /note="Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family [Amino acid transport and metabolism]; Region: NifS; COG1104" /db_xref="CDD:440721" regulatory complement(2101371..2101376) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2022" regulatory complement(2102486..2102491) /regulatory_class="ribosome_binding_site" regulatory 2102594..2102599 /regulatory_class="ribosome_binding_site" gene 2102608..2104062 /gene="nadB" /locus_tag="lmo2023" /db_xref="GeneID:986699" CDS 2102608..2104062 /gene="nadB" /locus_tag="lmo2023" /EC_number="1.4.3.16" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of oxaloacetate from L-aspartate" /codon_start=1 /transl_table=11 /product="L-aspartate oxidase" /protein_id="NP_465547.1" /db_xref="GeneID:986699" /translation="MIKERVIIVGSGISGCTAALRLMQDYDVTIITKGYKEESNSMLA QGGVAAAVSKNDTPKKHFSDTFQAGCFHNKVLAVNQLVTHGPMVIQKLIAEGMAFDEQ DGELALGLEGAHQLPRILHTGGDQTGKFLTTFLQEKLTDIHWQEQKMAIEIIKQNDSA IGVHCLDKENRLHTYYGEHIILASGGLGQLFPVTTNAATISGDGLALAYRAGAKLTDM EFIQFHPTLLFLNGRCHGLISEAVRGEGAKLIRADGSAIMTDVHPRADLAPRDIVAAT LFAEIQDGNEVFLDITAIPNFEKRFPGITANLDAHHIPFRETKRIPVHPGAHFLMGGI RTDLSGKTNIPGLYAIGEVANAGVHGANRLASNSLLETLVFGEKVAEYIRTQKINPID HPEIPLSNQIQTPHLPDKQLLQEKIWETLGITRKPEKITEFLHWLTDFDYANHTRKTA EISHMLITAKLIAESALKRTESLGAHRILKGVIK" misc_feature 2102608..2104059 /gene="nadB" /locus_tag="lmo2023" /note="L-aspartate oxidase; Provisional; Region: PRK08071" /db_xref="CDD:236147" regulatory 2104047..2104052 /regulatory_class="ribosome_binding_site" /gene="nadB" /locus_tag="lmo2023" gene 2104059..2104904 /gene="nadC" /locus_tag="lmo2024" /db_xref="GeneID:984833" CDS 2104059..2104904 /gene="nadC" /locus_tag="lmo2024" /EC_number="2.4.2.19" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide" /codon_start=1 /transl_table=11 /product="nicotinate-nucleotide pyrophosphorylase" /protein_id="NP_465548.1" /db_xref="GeneID:984833" /translation="MNSILMNQAIQAFLLEDIGQYDLSAGTVFPRDTMGEGVFLAKET GILCGISIPPKVYELLGGNIQFEAYKKDGDWVQKGDIIAAVKAPVRTLLSGERVILNL MQRMSGIASQTNFAIKQLDDSAIRICDTRKTAPGLRAFDKYAVQTGGGFNHRNGLYDG VMLKDNHIAFSGGITSAVSTVRGKLGHMVKIEVETETAEQVKEAVQAGADIIMFDNRT PEEIKQLVKLVPPHITTEISGNVTLENIHRYKGSGANYISLGSLTHSVRAFDISFNSK GGIKA" misc_feature 2104080..2104880 /gene="nadC" /locus_tag="lmo2024" /note="Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with...; Region: QPRTase; cd01572" /db_xref="CDD:238806" misc_feature order(2104128..2104133,2104344..2104349,2104359..2104361, 2104449..2104451,2104455..2104457,2104467..2104472, 2104527..2104532,2104542..2104544,2104548..2104550, 2104554..2104559,2104566..2104568,2104599..2104601, 2104848..2104850) /gene="nadC" /locus_tag="lmo2024" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:238806" misc_feature order(2104446..2104454,2104515..2104520,2104701..2104703, 2104770..2104775,2104830..2104832,2104836..2104841, 2104848..2104850) /gene="nadC" /locus_tag="lmo2024" /note="active site" /db_xref="CDD:238806" regulatory 2104886..2104891 /regulatory_class="ribosome_binding_site" /gene="nadC" /locus_tag="lmo2024" gene 2104901..2106001 /gene="nadA" /locus_tag="lmo2025" /db_xref="GeneID:987946" CDS 2104901..2106001 /gene="nadA" /locus_tag="lmo2025" /experiment="EXISTENCE:[PMID:19448609]" /note="3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate" /codon_start=1 /transl_table=11 /product="quinolinate synthetase" /protein_id="NP_465549.1" /db_xref="GeneID:987946" /translation="MNLLETVEQDTMPTHYKQMTQVEMIARVTEIKAQLGENLFIPCH HYQKDEVVPFADAIGDSLQLAQIAAQNKKAKHIVFCGVHFMAETADMLTTSEQIVTLP DMRAGCSMADMADIHQLTNAWPKLQTLFGDTILPVTYINSTAAIKSFVGEHGGTTVTS SNATKIVSWALEQKERIFFLPDQHLGRNTAFELGIPLEHMAIWNPIKNELEYEGNLDD CKVILWKGYCSVHQHFTVKNIENIRKNHPNMRIIVHPECTHEVVSLADDSGSTKKIVT EINNAAPGTEWAVGTEANLVGRIIQENPDKKIVSLNPFMCPCMTMNRIDLPHLLWTLE AIQNGEKRNQIKVDEQTTKFALKALERMLQLS" misc_feature 2104925..2105998 /gene="nadA" /locus_tag="lmo2025" /note="quinolinate synthase NadA; Region: PRK09375" /db_xref="CDD:236489" gene 2106073..2106292 /locus_tag="lmos78" /db_xref="GeneID:18245163" misc_RNA 2106073..2106292 /locus_tag="lmos78" /product="rliF" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245163" regulatory complement(2106279..2106316) /regulatory_class="terminator" gene complement(2106329..2108209) /locus_tag="lmo2026" /db_xref="GeneID:984839" CDS complement(2106329..2108209) /locus_tag="lmo2026" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan binding protein" /protein_id="NP_465550.1" /db_xref="GeneID:984839" /translation="MKKKFVYLLLLVLFMTVLPFQMLEAQAASTSWIEQELDGNEPFI AETEKILSKNRQDITLADLETIQKIHVFGADSIPNKISDYKNLTALEANYGTITEVPE SVGSLKELVTLNVDENNLQEFPMVIFQLPKLEVLYISRGNITEIPTEITTLASHLKVL DVSNQKLVTIPDSILTTNWKAMHDGKLGMSLAGNQIASDIPANYLDNFNSGGNMLEFY DNPTIDYLQKQDQLTYTGGTIEVPLNTDFKQLTPDKTNLGLKSNIPLFSQHEFMYYDD GTSANILTNGVATDVGDGYITIKSTLSTNSNPFAKVRVPIKVTAPLKGADVTVQYLDS NGDTLATPDILSGNEGDAYASTPKTIDGYTLTQTPTNAQGTFTEEPQTVIYVYTKNSV AAAPVTVKYLNEEGKILTASDNLTGNVDDPYQTKAKEFAGYTLDESKLPTNASGVFKT NAQTVTYVYKTIPASIKAHDSTMNVGDTWSAKDNFDSAVDSLGVAVPFDEVKVDGSVD TTKAGVYPVTYSFAGDSVTIKVTVKATVVPAPPITPIKPVVPAPANPNTPSTQQTPTK QSGTLKIKATHQEQPIVAGNLKLPTTGDNLWDSVLYSIFGFITVCLSFVLFFRLKKQK NS" misc_feature complement(2107355..>2108059) /locus_tag="lmo2026" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature complement(2107883..2107951) /locus_tag="lmo2026" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(2107814..2107882) /locus_tag="lmo2026" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(2107742..2107813) /locus_tag="lmo2026" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(2107676..2107741) /locus_tag="lmo2026" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature complement(2107046..2107228) /locus_tag="lmo2026" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature complement(2106830..2107018) /locus_tag="lmo2026" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature complement(2106614..2106811) /locus_tag="lmo2026" /note="Bacterial Ig-like domain (group 3); Region: Big_3; pfam07523" /db_xref="CDD:400072" regulatory complement(2108220..2108225) /regulatory_class="ribosome_binding_site" regulatory complement(2108420..2108444) /regulatory_class="terminator" gene complement(2108500..2109603) /locus_tag="lmo2027" /db_xref="GeneID:987947" CDS complement(2108500..2109603) /locus_tag="lmo2027" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell surface protein, internalin proteins" /protein_id="NP_465551.1" /db_xref="GeneID:987947" /translation="MKKILTGLSTTLLLTVLLLTITGGDLKAKAASDLYPLPAPIIDV FPDEGLAKDMAKNLNKDSVNDVIDQDDLDALTGLGFETETITNDSMQLLERAMFNNVN IVSVMEFGEDLTEFPDISTIPHLNTLFFNTPPEGVTRNLSLPDYQNYPEMVTITMSGS NLIGAIPDFTGMPDLSQLYMADMMITSDDVPDFHTIPKLSTLDLSHNQLTNLPDFQNL TNLAELNLSFNNLTNTMTNFTNLSNLNNLNLDYNHLNELPSNVLNSIFIENQSGTVPD QIIKQGETCTIQLPIYFQLAEINMLVNPTVLGSYSADIPVEVVTTTNADTESITLDTS ELSPGVYNFNVQFNDAYPITQEGCVYDWVLTVN" misc_feature complement(2109439..>2109537) /locus_tag="lmo2027" /note="Bacterial adhesion/invasion protein N terminal; Region: Internalin_N; pfam12354" /db_xref="CDD:289150" misc_feature complement(<2108779..>2109321) /locus_tag="lmo2027" /note="type III secretion system effector E3 ubiquitin transferase SspH2; Region: PRK15387" /db_xref="CDD:185285" misc_feature complement(<2108905..>2109126) /locus_tag="lmo2027" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature complement(2109010..2109081) /locus_tag="lmo2027" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature complement(2108944..2109009) /locus_tag="lmo2027" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" regulatory complement(2109611..2109616) /regulatory_class="ribosome_binding_site" gene complement(2110009..2110785) /locus_tag="lmo2028" /db_xref="GeneID:987967" CDS complement(2110009..2110785) /locus_tag="lmo2028" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465552.1" /db_xref="GeneID:987967" /translation="MDGIYQHFRAEEYAFIDKILGITMQVENEYTPQLTDFLDPRQRF ITETVIGGYDEINVQFFGGVAHAERRRALIYPDYYTPTEADFEIALFHIRYPVKFTTL THQKILGTLMSLGMKRDIFGDILNNGTEWQLLVESTMKDYLTLQLEKIGKVNVMLEET ELTNAVYAPVIWEEMGLTVSSMRLDVIISNAHHISRQKAKQLVTAGLVKVNWKTVENP DFECEEEDVLSARGYGRVKVLSTGGRTKKDKIRIEIGYLK" misc_feature complement(2110012..2110785) /locus_tag="lmo2028" /note="RNA-binding protein YlmH, contains S4-like domain [General function prediction only]; Region: YlmH; COG2302" /db_xref="CDD:441877" regulatory complement(2110793..2110798) /regulatory_class="ribosome_binding_site" regulatory complement(2110883..2110902) /regulatory_class="terminator" gene complement(2110909..2111199) /locus_tag="lmo2029" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987945" CDS complement(2110909..2111199) /locus_tag="lmo2029" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465553.1" /db_xref="GeneID:987945" /translation="MQSILYQVVEIVLFIIRWLPTLMFIYFLMSWFPGARESKIGQFL ARIFEPILEPFRRIIPPIGMFDISSLVAYFIFQYAMRVLTGLIQVYVIPMLF" misc_feature complement(2110936..2111187) /locus_tag="lmo2029" /note="Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family [Posttranslational modification, protein turnover, chaperones]; Region: Ycf19; COG0762" /db_xref="CDD:440525" regulatory complement(2111211..2111216) /regulatory_class="ribosome_binding_site" gene complement(2111222..2111680) /locus_tag="lmo2030" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984817" CDS complement(2111222..2111680) /locus_tag="lmo2030" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465554.1" /db_xref="GeneID:984817" /translation="MGLSNKFKSFFFLDEEEEYYEEEVAREPEPMQKKTKKEKPNKNR FYAVEEDDAKVVSMQGAQFSSRMVLAEPRVYAEAQELADYLKEYKSVVVNLQRISHDQ ATRIVDFLSGTVYALGGDIQRVGNNIFLCTPDNVEVDGSISEMLDEQNFM" misc_feature complement(2111228..2111680) /locus_tag="lmo2030" /note="Cell division protein SepF/YlmF, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning]; Region: SepF; COG1799" /db_xref="CDD:441404" gene complement(2111684..2112373) /locus_tag="lmo2031" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987935" CDS complement(2111684..2112373) /locus_tag="lmo2031" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465555.1" /db_xref="GeneID:987935" /translation="MTKQANLQKVTAQIEHACEESNRQSEDVTLVAVTKTIDVTGITE LYDLGIRHFGENRADVFLEKTVELADKDDICWHYIGSLQTRKVKDVLPQIDYLHSLDR SSLAKEIEKRATKPVKCFLQVNISGEESKHGFSKEEALSFLQEANFTFIEIVGLMTMA PITNSDIELHHVFHELKQLQQEIHALQLKNIPCTELSMGMTNDYGIAITEGATFIRIG RALVNDDNMEV" misc_feature complement(2111711..2112373) /locus_tag="lmo2031" /note="Pyridoxal 5'-phosphate homeostasis protein YggS, UPF0001 family [Coenzyme transport and metabolism]; Region: YggS; COG0325" /db_xref="CDD:440094" regulatory complement(2111689..2111694) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2031" regulatory complement(2112380..2112385) /regulatory_class="ribosome_binding_site" gene complement(2112492..2113667) /gene="ftsZ" /locus_tag="lmo2032" /db_xref="GeneID:987944" CDS complement(2112492..2113667) /gene="ftsZ" /locus_tag="lmo2032" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division protein FtsZ" /protein_id="NP_465556.1" /db_xref="GeneID:987944" /translation="MLEFDTSSESLATIKVIGVGGGGNNAVNRMIEHGVQGVEFISVN TDAQALNLAKAETKLQIGTKLTRGLGAGAVPEIGKKAAEESREQIEEALKGSDMVFVT AGMGGGTGTGAAPVIAQIAKEMGALTVGVVTRPFGFEGPKRTKQALTGTEAMKEAVDT LIVIPNDRLLQIVDKNTPMLEAFREADNVLRQGVQGISDLIAVPGLINLDFADVKTIM TNRGSALMGIGIATGENRAAEAAKKAISSPLLETSVDGAKGVLMNITGGSNLSLYEVQ EAAEIVSSASDEDVNMIFGSVINDELKDELIVTVIATGFDEAKQAQQQAQANRRPNQS IQVNRPNYAVQDEQQNDYAQNAPQQANAPVHEQQAEPQQNSSDVDVPAFIRNRNRRG" misc_feature complement(2112513..2113583) /gene="ftsZ" /locus_tag="lmo2032" /note="Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning]; Region: FtsZ; COG0206" /db_xref="CDD:439976" regulatory complement(2113675..2113680) /regulatory_class="ribosome_binding_site" gene complement(2113734..2115014) /gene="ftsA" /locus_tag="lmo2033" /db_xref="GeneID:987943" CDS complement(2113734..2115014) /gene="ftsA" /locus_tag="lmo2033" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division protein FtsA" /protein_id="NP_465557.1" /db_xref="GeneID:987943" /translation="MGDSEIYVSLDIGTASVKVIIAEMADDRLNIIGVGNVESSGIKK GIIIDIDKTVESIKKAIEQAERMVGVEISQVIVGVVSSQVHLEACRGIVAVGSENREI TDEDVWNVMDAAQVVPLSPEREIINTIPDQFVVDGLTGITDPRGMIGVRLEMEGTLIT GSKTILHNTLRCVERAGLEISDIALQPLAEASISLSEDDKEFGTALVNVGAGTTTVSV FEQGRLTYTGVIPVGGDNITKDLSLGLNTSTANADRVKLDHGYAFYDDASPDEVFAID VIGSDQKQHFTQVEVADIIEARMEEIFQLVVEELTRVGKTHLPGGYVLTGGSMAIPGA IDLAGKTLAAHVRLAIPDYIGVREPSFTTAVGLIKYAYQMAELEGRDVSSSANEPRYD DEAPKQKQPKPKQKKSDDEKVSTKMKNFFGAFFE" misc_feature complement(2113851..2115008) /gene="ftsA" /locus_tag="lmo2033" /note="Cell division ATPase FtsA [Cell cycle control, cell division, chromosome partitioning]; Region: FtsA; COG0849" /db_xref="CDD:440610" regulatory complement(2115024..2115029) /regulatory_class="ribosome_binding_site" gene complement(2115381..2116193) /gene="divIB" /locus_tag="lmo2034" /db_xref="GeneID:988005" CDS complement(2115381..2116193) /gene="divIB" /locus_tag="lmo2034" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division protein FtsQ" /protein_id="NP_465558.1" /db_xref="GeneID:988005" /translation="MAENKRVISIENRIPELKKYRKKKLVRHLAILIGIFVILIAITL YFLSPLSKLDKIAVSGNKQLTENEVRKESGLEIGEFVIGISNGKTEDALKKNTLIKDA TVSKEGLNDVQINITEFKTIGYQQQDGKYYDVLESGIMLTDQPRQFPIGNDLLFQNFK NGKTLEKMVDQINKLPKDVVSSISEVIYSPTKSDKNHIKLYMNDGNQVSADISTFAEK MQHYPAIVAQLAKGQKGVIDIEVGSYFQSYYQQNAEKKATEEAAKEKKETNE" misc_feature complement(2115471..2116145) /gene="divIB" /locus_tag="lmo2034" /note="Cell division septal protein FtsQ [Cell cycle control, cell division, chromosome partitioning]; Region: FtsQ; COG1589" /db_xref="CDD:441197" regulatory complement(2116201..2116206) /regulatory_class="ribosome_binding_site" gene complement(2116216..2117307) /gene="murG" /locus_tag="lmo2035" /db_xref="GeneID:984828" CDS complement(2116216..2117307) /gene="murG" /locus_tag="lmo2035" /EC_number="2.4.1.227" /experiment="EXISTENCE:[PMID:19448609]" /note="UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis" /codon_start=1 /transl_table=11 /product="UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase" /protein_id="NP_465559.1" /db_xref="GeneID:984828" /translation="MKVAISGGGTGGHVYPALALIRELKKSHPEAEFLYIGTEKGLEA GIVKREGIPFEAIEITGFKRSLSLENIKTVMRFLSGAKKSKQILRDFKPDVVIGTGGY VCGPVVYAAAKLKIPTLIHEQNSVAGLTNKFLSRYTDKVAICFEEVSDSFASEKIVFT GNPRASEVVGVDSEGALEAYGLVSGKPTVLVFGGSRGARGVNEAVEAVLPEWNNRDFQ LLYVTGDVHYEKIKDSLAELNLGNHISVQPFIYDMPKILNAVTLVVSRAGATTLAELT ALGVPSILIPSPYVTANHQENNARALEKNNAAIVITEAELKNTDLMATVDSILNDEAK LNSMKLSAKQMGRPDAAAKLVEAVLSIMK" misc_feature complement(2116219..2117307) /gene="murG" /locus_tag="lmo2035" /note="UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell wall/membrane/envelope biogenesis]; Region: MurG; COG0707" /db_xref="CDD:440471" gene complement(2117304..2118671) /gene="murD" /locus_tag="lmo2036" /db_xref="GeneID:987942" CDS complement(2117304..2118671) /gene="murD" /locus_tag="lmo2036" /EC_number="6.3.2.9" /experiment="EXISTENCE:[PMID:19448609]" /note="UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase" /protein_id="NP_465560.1" /db_xref="GeneID:987942" /translation="MKKIEMYHHKKVLVLGLARSGVSAATIMHKLGAFVTVNDQKPFS ENPEAQGLLEQGIKVICGSHPIELLDEGFELVIKNPGIPYNNPMIEKALKLKIPVITE VELAYQISEAPIVGITGTNGKTTTTTIIHHMLNTHKENSSLLAGNIGFPASAVAENAT SDQYISMELSSFQLMGVETFKPHISVITNIYEAHLDYHTDRSEYVQAKWHIQKNQIAD DFLVINWDQEELKNLTKQTKAQVIPFSTTQRLGQGSYVQNGNIMFNDEVIGERDNILL PGEHNLENVLASVAVAKTLGVTNEEIMHVLETFKGVEHRTQFVVEWQGRKFYNDSKAT NILATQSALKGFKNPVVLLAGGLDRGNSFDELLPFFKNVKTLIVFGETADKIGRVGKI AGIEVHYVDNVEAAVPVAYRESAPGDIILLSPACASWDQYRTFEVRGNAYMDAIGELI EEVEK" misc_feature complement(2117322..2118653) /gene="murD" /locus_tag="lmo2036" /note="UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; Region: MurD; COG0771" /db_xref="CDD:440534" regulatory complement(2117315..2117320) /regulatory_class="ribosome_binding_site" /gene="murD" /locus_tag="lmo2036" regulatory complement(2118683..2118687) /regulatory_class="ribosome_binding_site" gene complement(2118812..2119786) /gene="mraY" /locus_tag="lmo2037" /db_xref="GeneID:984374" CDS complement(2118812..2119786) /gene="mraY" /locus_tag="lmo2037" /experiment="EXISTENCE:[PMID:19448609]" /note="First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan" /codon_start=1 /transl_table=11 /product="phospho-N-acetylmuramoyl-pentapeptide- transferase" /protein_id="NP_465561.1" /db_xref="GeneID:984374" /translation="MSLYMLVSTFAVAFIITVIGVPLFIPFLVKLKFGQSIRDEGPKM HEKKSGTPTMGAVVFITAMLISFLVFSFISGEVSAATWLLFIALALFGALGFLDDYIK VVQKRNLGLTSKQKFLGQVVISILFYLVYHFNDFAETLNIPFTNIEVDLGWFFVIFIL FWLVGFSNAVNLTDGLDGLVSGLSVIAFSAFGVIAFYQEQMDVAIFCFAIVGGMLGFL LFNKNPAKIFMGDTGSLALGGSIAAISILVHQEWLLLLIGIIFVIETASVILQVFYFK ATGGKRIFRMTPIHHHFELGGWSEWRVVLTFWGIGLVGAIISVCVVIF" misc_feature complement(2118830..2119666) /gene="mraY" /locus_tag="lmo2037" /note="Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the formation of the first lipid intermediate in the synthesis of bacterial cell wall peptidoglycan. It catalyzes the formation of...; Region: GT_MraY; cd06852" /db_xref="CDD:133462" misc_feature complement(2119490..2119495) /gene="mraY" /locus_tag="lmo2037" /note="Mg++ binding site [ion binding]; other site" /db_xref="CDD:133462" misc_feature complement(2119094..2119105) /gene="mraY" /locus_tag="lmo2037" /note="putative catalytic motif [active]" /db_xref="CDD:133462" misc_feature complement(order(2118911..2118925,2118941..2118943)) /gene="mraY" /locus_tag="lmo2037" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:133462" regulatory complement(2119794..2119799) /regulatory_class="ribosome_binding_site" gene complement(2119833..2121308) /gene="murE" /locus_tag="lmo2038" /db_xref="GeneID:987940" CDS complement(2119833..2121308) /gene="murE" /locus_tag="lmo2038" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase" /protein_id="NP_465562.1" /db_xref="GeneID:987940" /translation="MKLNELMQAIPVFTGEVSETIEISHIAQDSRKVKPGTLFICIDG EVVDGHKFASRAVELGAVAIIAEKQVDVSIPVIYVRDSKRAMAMLADYFYGSPTQALK LVGITGTNGKTTVSHLVEQIVRENGEQTGLIGTMYRKIGDQILETKNTTPDSLTLQET FRDMLLSGVSTAVMEVSSHALVQGRVYGSDYDVAVFMNLSQDHLDYHHTMEEYANAKS LLFAQLGNSYHTSNPKIAVLNADDAESVRMQKATAAHIITFGIKQEADFQASNIKITS HGSTFDLGTPVGNFTLKIKMIGNFSVYNVLAAIATSFALHIPMEKAIKTVESIPGVKG RFELVHAGQEFPVIVDYAHTPDGLLNVLETIDEFAEKRVFVVVGCGGDRDKGKRPQMA KIAVDYATNPIFTSDNPRSENPRAIIEDMIQGVPESDAYVVHENRRDAIRFAVNQAEA GDVILIAGKGHEDYQVVGDEVIDFDDRVEARIAIEKKLGLA" misc_feature complement(2119851..2121236) /gene="murE" /locus_tag="lmo2038" /note="UDP-N-acetylmuramyl tripeptide synthase [Cell wall/membrane/envelope biogenesis]; Region: MurE; COG0769" /db_xref="CDD:440532" regulatory complement(2121317..2121322) /regulatory_class="ribosome_binding_site" gene complement(2121483..2123738) /gene="pbpB" /locus_tag="lmo2039" /db_xref="GeneID:984823" CDS complement(2121483..2123738) /gene="pbpB" /locus_tag="lmo2039" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 2B" /protein_id="NP_465563.1" /db_xref="GeneID:984823" /translation="MKRRIGNMRRGALVLFIFFTILFLLVSGRFLYLQITGEANGVPL AAKASKQHLKSSVLEAKRGSILDRKGEVLAEDTASYTVAAVVSDKLSKTTKNPMRVVD EEKTARILAKYIPMDESDILDKLHEKGKYQVEFGAAGKNISTETKAKIDKENLPGIEF TRQSERFYPNGTFATQLIGFAQQEEEKNATVLEGKMGIESRYNDILTGKNGKIDYSTD RMGYILPNSKNKVTEAKDGKDITLTLDKKIQTFLEDTMTTVDAKYKPKNMMAVVADPK TGEILAISQRPSFNPADRSTITGNSSSIWQDLPVEYAYEPGSVMKIISLASAIDTNAY NANEYYQSGSYKVGDIAIHDHNNGNGWGSITYREGVERSSNVAFAKLLNKMGTDTFKT YLDKFGFGKKTGIALPNETSGKILYNYPIEKVTTVFGQGTTVSMMQMIQAASAIASDG TMKEPYVVSSVKDPNTGEETDTKTKIAGKPISAETAKKTRDELKNVISGEHGTGKLYA IPGYDVAGKTGTSQIPDPKTGKYMTGADNYIFSFLGMAPADNPELVIYVTMQQPQLSG SQTGGEAVSEVFNPVMKNSLQYMNIKPGDAEKLASEKVPVLAGKKVDEAKKIVKDKGL EPIVVGNGKKIVQQLPQANAEIMQGQKVILMTDGDMTAPDMVTWSKDDALKVSEITGI PFEFSGNGYVKSQSVSAGSVINSETKMKITLAPPEEISAFNQNHDQDTAEKNKKATDI QENAGIGDLLN" misc_feature complement(2121969..2123738) /gene="pbpB" /locus_tag="lmo2039" /note="Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis]; Region: FtsI; COG0768" /db_xref="CDD:440531" misc_feature complement(2121768..2121932) /gene="pbpB" /locus_tag="lmo2039" /note="PASTA domain of PBP2x-like proteins, first repeat. Penicillin-binding proteins (PBPs) are the major targets for beta-lactam antibiotics, like penicillins and cephalosporins. Beta-lactam antibiotics specifically inhibit transpeptidase activity by...; Region: PASTA_Pbp2x-like_1; cd06576" /db_xref="CDD:119327" misc_feature complement(2121771..2121932) /gene="pbpB" /locus_tag="lmo2039" /note="PASTA domain [structural motif]; Region: PASTA domain" /db_xref="CDD:275384" misc_feature complement(2121597..2121758) /gene="pbpB" /locus_tag="lmo2039" /note="PASTA domain of PBP2x-like proteins, second repeat. Penicillin-binding proteins (PBPs) are the major targets for beta-lactam antibiotics, like penicillins and cephalosporins. Beta-lactam antibiotics specifically inhibit transpeptidase activity by...; Region: PASTA_Pbp2x-like_2; cd06575" /db_xref="CDD:119326" misc_feature complement(2121600..2121758) /gene="pbpB" /locus_tag="lmo2039" /note="PASTA domain [structural motif]; Region: PASTA domain" /db_xref="CDD:275384" gene complement(2123735..2124097) /gene="ftsL" /locus_tag="lmo2040" /db_xref="GeneID:987937" CDS complement(2123735..2124097) /gene="ftsL" /locus_tag="lmo2040" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division protein FtsL" /protein_id="NP_465564.1" /db_xref="GeneID:987937" /translation="MSNVAYKSNLEPNRVHREAEQPKKQILKRGQMTLGEKVIITIAL AIVLVVAFRIISVQAQIYTVNQEIQTKETKILEQQKSNEDLKVEVKDLGRYERILKIA KEKGLKLDGDNVKVVDGQ" misc_feature complement(2123738..2124097) /gene="ftsL" /locus_tag="lmo2040" /note="Cell division protein FtsL [Cell cycle control, cell division, chromosome partitioning]; Region: FtsL2; COG4839" /db_xref="CDD:443867" regulatory complement(2123749..2123754) /regulatory_class="ribosome_binding_site" /gene="ftsL" /locus_tag="lmo2040" regulatory complement(2124107..2124112) /regulatory_class="ribosome_binding_site" gene complement(2124114..2125052) /gene="mraW" /locus_tag="lmo2041" /db_xref="GeneID:984957" CDS complement(2124114..2125052) /gene="mraW" /locus_tag="lmo2041" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="S-adenosyl-methyltransferase MraW" /protein_id="NP_465565.1" /db_xref="GeneID:984957" /translation="MFKHETVLLHETVDMLEVKPDGIYVDATLGGAGHSEYLLNKLNE KGHLFAFDQDQTAIDNAKIKLADYSDKVTFIKANFRDMKEALNERGIEAVDGILYDLG VSSPQLDERERGFSYHQDAALDMRMDQEQELTAKTVVNEWSYQDLIRIFFQYGEEKFS KQIAREIERRREVKPIETTGELVDIIKTAIPAPARRKGGHPGKRTFQAIRIAVNDELG AVEDSLEKALTLIKPGGRISVITFHSLEDRITKQLFQEATKGPDLPPGLPVIPDEYKP DFKLATRKPIVPSEEELEQNNRARSAKLRVIEKIIK" misc_feature complement(2124123..2125052) /gene="mraW" /locus_tag="lmo2041" /note="16S rRNA C1402 N4-methylase RsmH [Translation, ribosomal structure and biogenesis]; Region: RmsH; COG0275" /db_xref="CDD:440044" regulatory complement(2125060..2125065) /regulatory_class="ribosome_binding_site" gene complement(2125065..2125496) /locus_tag="lmo2042" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985262" CDS complement(2125065..2125496) /locus_tag="lmo2042" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division protein MraZ" /protein_id="NP_465566.1" /db_xref="GeneID:985262" /translation="MFMGEYQHNIDIKGRLIVPAKFRELLGDNFVITRGLDKCLFAYP QEEWKKLEEKLQTLPLTKKDARSFTRFFFSGASECELDKQGRINIPSNLLQYADLEKE TVIIGVSSRIEIWSKSEWDDVFNEAEESFADLAENMIGFDI" misc_feature complement(2125083..2125496) /locus_tag="lmo2042" /note="DNA-binding transcriptional regulator and inhibitor of RsmH methyltransferase activity [Translation, ribosomal structure and biogenesis]; Region: MraZ; COG2001" /db_xref="CDD:441604" regulatory complement(2125506..2125512) /regulatory_class="ribosome_binding_site" regulatory complement(2125682..2125706) /regulatory_class="terminator" gene complement(2125699..2126946) /locus_tag="lmo2043" /db_xref="GeneID:987936" CDS complement(2125699..2126946) /locus_tag="lmo2043" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MFS transporter" /protein_id="NP_465567.1" /db_xref="GeneID:987936" /translation="MFRELHPNIRARILIQFLSKVIGSMIFPFMAIYFSMEINSSVAG FLLMINVLAQFLAGMYGGHLADIIGRKKLMVTGELLKVFAFLGMVLCNSPMFHSPWIT FVMLLIIGVAQGLINPAGEAMLIDVSTLENRSFMYSVSYWANNLSIMIGIMVGGWFFV DYLFPLLVVLFIMSFVTAWLTISLISETLQQKEMPHKGSYGLMGMLKNYGQVLHDYRF LLYTIGGIAIMSIEFQRSNYISVRLAEDVKALLVHLGPLGNISLNGVQIVSVLTAVNT LFIVLFTVPIARFVTKRAQQPIMYVGFTLFALGFAVCAFANNLAVLLLATMVLSIGEL LYVPTRQTILAAIVDDDKRGAYMAFNGIIFQIGKMIGSVSLVFAPFIGKYGMGAFTII LGILSIVFSAVALKSGWEKVLVK" misc_feature complement(2125747..2126922) /locus_tag="lmo2043" /note="Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_MdtH_MDR_like; cd17329" /db_xref="CDD:340887" misc_feature complement(order(2125843..2125845,2125852..2125857, 2125864..2125869,2125876..2125878,2125924..2125926, 2125936..2125938,2125948..2125953,2126098..2126100, 2126110..2126112,2126236..2126238,2126245..2126253, 2126260..2126265,2126272..2126274,2126503..2126505, 2126512..2126517,2126524..2126526,2126584..2126586, 2126593..2126601,2126605..2126610,2126773..2126775, 2126866..2126868,2126875..2126880,2126887..2126892)) /locus_tag="lmo2043" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340887" regulatory complement(2126954..2126959) /regulatory_class="ribosome_binding_site" regulatory 2127050..2127055 /regulatory_class="ribosome_binding_site" gene 2127062..2128876 /locus_tag="lmo2044" /db_xref="GeneID:984734" CDS 2127062..2128876 /locus_tag="lmo2044" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptide ABC transporter substrate-binding protein" /protein_id="NP_465568.1" /db_xref="GeneID:984734" /translation="MDKDYFTMRAHLYNITTDLEVPFKLNDVANIWFCTTKNAKRKLQ QYQAKKMLTYLPGLGRGNVSRIIFPKQLELEVLDVLEQSLAEDAFSNILFLLQLPIPK SWFTSISTEIQQMFGLQVTENQQEVLRSIVRRKLTTLDPLQTSVSMEAFLITQISDSL VKYDEKKKRIIPHIAHHWKVSDDFTEWTFYLRKSVLFHHGRTLDSEDVKYTLMRSMQA ESVSFWQLQDIQSIYCPNKFTLSIQLKKTDPFFIRYLCTANMAILPRDIIFDEYKWIS TGPFRVAERNDERLILEAFDGYFLERPILDRVEFWTVQTGNNLKTIPMQFTSVDYEEN PAYVERRKPGVGVNFICFNTHRNGTPQHPAFREAIYHLIDCQKASDQHFENYGTVASN YYPEKSLPPKKHPEKITTLLKTANYQGEKVVFGTTQHPTAVKESKWIQEQAVKFGINL ERKIISHQEASYSNVPAEETDFMMMGEIPASDDEMAYLDFLNNPYLLPQQLFNQVIIK ELTEKLVAFKKEKDASKRDALQTSIDSWLTENHYLIYLHHPEKSQSLHSMIKGIAENP YGYFDLSKVWIETSPLKTLKPDYKQSHRGKAPHTIKQK" misc_feature 2127062..>2127331 /locus_tag="lmo2044" /note="Sugar transport-related sRNA regulator N-term; Region: SgrR_N; pfam12793" /db_xref="CDD:432788" misc_feature 2127425..2128795 /locus_tag="lmo2044" /note="The C-terminal solute-binding domain of DNA-binding transcriptional regulator SgrR is related to the ABC-type oligopeptide-binding proteins and contains the type 2 periplasmic-binding fold; Region: PBP2_SgrR_like; cd08507" /db_xref="CDD:173872" gene complement(2128806..2129192) /locus_tag="lmo2045" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985261" CDS complement(2128806..2129192) /locus_tag="lmo2045" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2045" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465569.1" /db_xref="GeneID:985261" /translation="MFDWLTNSTAIIIILPVVVFILTMFFSSFKLKKSQRRIMLAADL STIFLIIAVHFFMIVLFNRSFLLYILLFLFILGIVIVVTAAKKEGEIQFRKILRGYWR LCFFIFALLYVALYLYGIVYSLVLMF" misc_feature complement(2128833..2129168) /locus_tag="lmo2045" /note="Protein of unknown function (DUF3397); Region: DUF3397; pfam11877" /db_xref="CDD:432154" gene complement(2129185..2130078) /locus_tag="lmo2046" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986332" CDS complement(2129185..2130078) /locus_tag="lmo2046" /EC_number="1.1.1.169" /experiment="EXISTENCE:[PMID:19448609]" /note="ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis" /codon_start=1 /transl_table=11 /product="2-dehydropantoate 2-reductase" /protein_id="NP_465570.1" /db_xref="GeneID:986332" /translation="MANQLKVGIIGAGAMGLLYAANFANISELTLFTRRKEQSDLLNQ KGLSLKDNSELKNIHIQATVITDAEKLSEQELLIIAVKQYSLKTILPLLRSIPERVPL LFIQNGAAHLDSMPLLGNKRTILLGISEHGAGREDDTTVIWRGHGRTKYSIYQGELNE AVIKILDSNPDFPVEKHASYLDIINEKLFINAVINPLTAVLQVQNGKLLENKEWHELL KTIVKEIQTVLPVENALEKVEVICQVTATNFSSMALDRMNNRMTEIDGIVLPILEKGE SLPTLHALYHLIKGLEGESDV" misc_feature complement(2129188..2130063) /locus_tag="lmo2046" /note="2-dehydropantoate 2-reductase; Reviewed; Region: PRK06522" /db_xref="CDD:235821" regulatory complement(2129198..2129203) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2046" regulatory complement(2130087..2130092) /regulatory_class="ribosome_binding_site" regulatory complement(2130158..2130186) /regulatory_class="terminator" gene complement(2130228..2130401) /gene="rpmF" /locus_tag="lmo2047" /db_xref="GeneID:984819" CDS complement(2130228..2130401) /gene="rpmF" /locus_tag="lmo2047" /experiment="EXISTENCE:[PMID:19448609]" /note="some L32 proteins have zinc finger motifs consisting of CXXC while others do not" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L32" /protein_id="NP_465571.1" /db_xref="GeneID:984819" /translation="MAVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLSHHVCP ECGQYDGKDVANS" misc_feature complement(2130234..2130398) /gene="rpmF" /locus_tag="lmo2047" /note="Ribosomal protein L32 [Translation, ribosomal structure and biogenesis]; Region: RpmF; COG0333" /db_xref="CDD:440102" regulatory complement(2130411..2130416) /regulatory_class="ribosome_binding_site" gene complement(2130492..2131028) /locus_tag="lmo2048" /db_xref="GeneID:987933" CDS complement(2130492..2131028) /locus_tag="lmo2048" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465572.1" /db_xref="GeneID:987933" /translation="MKWSISQLKKYRDSNFTINEKADLKKFFQENNIDVRDASPVQIT GELIVHPEEVTANLTMRGEWTLPCARTLEDVIYPYEVHATETFVKSKEQVLDESWHVM EQDMVDLTPVVEELLLVEIPMQVFSEDALEMSNLPRGKEWEMKTEEGNLLEQIAKEPK VDPRLAGLANFFDEKKED" misc_feature complement(2130501..2131028) /locus_tag="lmo2048" /note="23S rRNA accumulation protein YceD (essential in plants, uncharacterized in bacteria) [Translation, ribosomal structure and biogenesis]; Region: YceD; COG1399" /db_xref="CDD:441009" regulatory complement(2131037..2131042) /regulatory_class="ribosome_binding_site" regulatory 2131144..2131149 /regulatory_class="ribosome_binding_site" gene 2131158..2132330 /locus_tag="lmo2049" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987928" CDS 2131158..2132330 /locus_tag="lmo2049" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465573.1" /db_xref="GeneID:987928" /translation="MKATGIVVEYNPFHNGHKLHLNKARELTQADVVIAVMSGSFVQR GEPAIIPKWERAKMALSAGVDMVVELPVSFATQHATIFAEEAVRILDAIHIDTLFFGS EHGVAEDFTFAAKKVVENEARFDEAIQLALVDKKTSYARAYTEAFKKLFGQNLLDITK PNNILGFHYALAVQKQNPSISLQTIPREHAGYHDEEASHDQIASATAIRKLILAGKLE EASHYLPASSIDILRNYEGPFLSWTDYWSFLQYRLIQASTEELEGIRGVSEGIQNRMQ QAATKAQNFSDFIELTKTKRYSNARLQRTALQILLNAKSKASSPYIRILGMNKTGQKY LSLHKKNISLPIVTTVSKAPPGLLEEELRATNIYTLVKKLENYQAGDFHIPPILTL" misc_feature 2131158..2132318 /locus_tag="lmo2049" /note="nucleotidyltransferase; Region: PRK13670" /db_xref="CDD:237464" regulatory 2132399..2132404 /regulatory_class="ribosome_binding_site" gene 2132412..2134652 /locus_tag="lmo2050" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987929" CDS 2132412..2134652 /locus_tag="lmo2050" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit A" /protein_id="NP_465574.1" /db_xref="GeneID:987929" /translation="MVQEYIRLRGARENNLQNISLDIPKRKITIFTGVSGSGKSSIVF ETIATESQRQLNETYSAYLRNFLPKYTQPDADSIENLSTSVIIDQKRLGGNSRSTLGT ITDINSILRLLFSRVGKPSIGTANLFSFNDPAGMCPDCHGVGQKVSVDLVKLLDPNKS LKEGAILFPTFSVDSWYWNSYAYSGFFDVNKKIKDYTDEEYDMLLHGKDIKVFLETPM GSMNATYEGLIPKFNRLYIQKEGEMSASTKKRVDKFTHIAPCTTCEGTRLSAQALSCK INGANIADFTAMQLDELKDTIARIDDPIATPMVKSVTERLQHLIDIGLGYMTLDRQTA SLSGGESQRVKMIRHLNSSLTDLLYIFDEPSIGLHPRDVHRLNELLVKLRDKGNTILV VEHDPDVIKIADHVVDVGPHAGKHGGEIQFVGSYTDLLKSDTLTGQFLNRHLPINSKP RQPKGFLTTEKSSRFNLKNIQANIPKEVLTVITGVAGSGKSTLIHSVFLKEYPDAIVI DQSAAHANIRSNPATYTGIMDPIRKAFGKENDVSPSLFSYNSKGACENCKGLGFTTMD LAFMDSIRTPCEVCHGKRFQDSVLQYKLNGKSISDVLELTVSEALDFFTDKKILKKIE AMEEVGIGYVTLGQALSTLSGGECQRLKLANELHKKGSIYIMDEPTTGLHMSDIEHIL TIIHTLVNKGNTVIVIEHNVDIIRNADWIIDLGPEGGSAGGQIIFEGAPLDLLENQQS LTAKYL" misc_feature 2132412..2134649 /locus_tag="lmo2050" /note="Excinuclease UvrABC ATPase subunit [Replication, recombination and repair]; Region: UvrA; COG0178" /db_xref="CDD:439948" regulatory 2134661..2134689 /regulatory_class="terminator" regulatory complement(2134661..2134689) /regulatory_class="terminator" gene complement(2134695..2135735) /locus_tag="lmo2051" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987932" CDS complement(2134695..2135735) /locus_tag="lmo2051" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465575.1" /db_xref="GeneID:987932" /translation="MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTV DNHPNKKDGSLSLVTIAMGKANIYTYMTAKFLPYHELEKDSEIKYENESDEEYNVRQM QMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAADVLHAGDLITEIDGNAF KSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIKLTAIDKKGTPGIGITLVDDEKIT ADPTVKIDSEKIGGPSAGLMFSLEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGI DQKVVAADKSGAKIFFAPNDPITEEMKKSDPSIESNYDTAVKTAKDIDTNMKIVPVKT FQDAVDYLKKLQ" misc_feature complement(2134701..2135678) /locus_tag="lmo2051" /note="Predicted secreted protein YlbL, contains PDZ domain [Signal transduction mechanisms]; Region: SdrC; COG3480" /db_xref="CDD:442703" regulatory complement(2135746..2135751) /regulatory_class="ribosome_binding_site" gene complement(2135754..2136236) /gene="coaD" /locus_tag="lmo2052" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987934" CDS complement(2135754..2136236) /gene="coaD" /locus_tag="lmo2052" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA" /codon_start=1 /transl_table=11 /product="phosphopantetheine adenylyltransferase" /protein_id="NP_465576.1" /db_xref="GeneID:987934" /translation="MGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKK PLFTIEERMEMIRQVTAHLPNVQVESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQ IASMNRTLNADIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNKAVQAKFK " misc_feature complement(2135757..2136227) /gene="coaD" /locus_tag="lmo2052" /note="Phosphopantetheine adenylyltransferase [Coenzyme transport and metabolism]; Region: CoaD; COG0669" /db_xref="CDD:440433" gene complement(2136239..2136796) /locus_tag="lmo2053" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984808" CDS complement(2136239..2136796) /locus_tag="lmo2053" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465577.1" /db_xref="GeneID:984808" /translation="MRVIAGERKGHALKAVPGNNTRPTTDKVKESLFSIIGPFFDGDM VLDLFAGSGGLGIEALSRGAERAVFIDQAALAIKTIRQNLEGCHFTERAEVYRNDAER ALKLLHKNEWKFDLIFLDPPYKKQQLEKLIGTLEKLELVNENGRIICEHDKEAIMPDT IGKFEKIKSVSYGITVLSIFEFQEA" misc_feature complement(2136242..2136796) /locus_tag="lmo2053" /note="16S rRNA G966 N2-methylase RsmD [Translation, ribosomal structure and biogenesis]; Region: RsmD; COG0742" /db_xref="CDD:440505" regulatory complement(2136244..2136249) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2053" regulatory complement(2136806..2136811) /regulatory_class="ribosome_binding_site" regulatory complement(2136858..2136886) /regulatory_class="terminator" gene complement(2136893..2137174) /locus_tag="lmo2054" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984727" CDS complement(2136893..2137174) /locus_tag="lmo2054" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465578.1" /db_xref="GeneID:984727" /translation="MENDRQAIVVWMNHLKQVRSLKRFGNVHYVSRKLKYAVLYCDMA EVEDISNKVSRFHYVKRVEMSFRPFLKTEYESKKEMMYEHKNEDVQISI" misc_feature complement(2136914..2137174) /locus_tag="lmo2054" /note="hypothetical protein; Provisional; Region: PRK02886" /db_xref="CDD:179491" regulatory complement(2137182..2137187) /regulatory_class="ribosome_binding_site" gene complement(2137205..2137654) /locus_tag="lmo2055" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984919" CDS complement(2137205..2137654) /locus_tag="lmo2055" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465579.1" /db_xref="GeneID:984919" /translation="MLATMENMALLDLSDELASMILNSEEAQNYKLAKEALLNDATSQ KNIRQFIRIKEQYEEVQRFGRYHPDYKEVTRKTRAYKREVDMDQNVAAFRRAEMDLQS LLDEISLLLASAVSENIKVPTGNPFFETKSACSTGGCGSGGGCGCSA" misc_feature complement(2137295..2137633) /locus_tag="lmo2055" /note="Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development) [Signal transduction mechanisms]; Region: YlbF; COG3679" /db_xref="CDD:442895" regulatory complement(2137663..2137668) /regulatory_class="ribosome_binding_site" gene complement(2137702..2138757) /locus_tag="lmo2056" /db_xref="GeneID:984807" CDS complement(2137702..2138757) /locus_tag="lmo2056" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465580.1" /db_xref="GeneID:984807" /translation="MKFIMRVAVLLIICLFIGYNTDLFFSKSVEKNTAEDTATKSNFP DNKKTTNENPKQVQDSSSLARFINKNVSELKKEFGDPVRVDKTAYGYDNYIYSQPGTS YMQVGVAKNIVQTIYALGQDLNVMPYTIGMSTEKVFTDANLQSEISFNYKDSYYKFEL SEEDLNARPIVNIGSGVYAQLNFDKFKSKLISVRYLNKLSFVKMRPYELSYQGEIYEE KLSPADWNAIDDASSKQVLEITNVIRDRYGIEEVAWDESVARVAYGHSVDMKKNDYFD HTSPTQGDLSKRLSKGDVKYTKAGENIAYNYVDSAAAVEGWLNSKGHRENLLDGSYTY MGAGTYRKYYTQNFIIK" misc_feature complement(2138137..2138559) /locus_tag="lmo2056" /note="CAP-associated N-terminal; Region: CAP_assoc_N; pfam14504" /db_xref="CDD:433999" misc_feature complement(2137711..2138079) /locus_tag="lmo2056" /note="Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain [Cell cycle control, cell division, chromosome partitioning, General function prediction only]; Region: YkwD; COG2340" /db_xref="CDD:441910" regulatory complement(2138765..2138770) /regulatory_class="ribosome_binding_site" regulatory complement(2138853..2138893) /regulatory_class="terminator" gene complement(2138904..2139809) /gene="ctaB" /locus_tag="lmo2057" /db_xref="GeneID:984806" CDS complement(2138904..2139809) /gene="ctaB" /locus_tag="lmo2057" /experiment="EXISTENCE:[PMID:19448609]" /note="converts protoheme IX and farnesyl diphosphate to heme O" /codon_start=1 /transl_table=11 /product="protoheme IX farnesyltransferase" /protein_id="NP_465581.1" /db_xref="GeneID:984806" /translation="MNQIEKTGELSASRFTVRDFTELVKIGIVNSNTITAFTGMWLAF QLNGISFIQNVDVIFFTIVGSALIVAASGAFNNVIDRDIDGIMERTKNRPTMTGKISG KRALMVALVLGVVGTIMLFMTTWQAGVLGVIGVFLYVVVYSLYAKRKLVSNTVIGSFS GAVPPLIGWFAVEPTFSIVPIMLFLVMFCWQPPHFYAIAIKRKEEYAAAGIPMLPVVK GIERTKKSMFFWVILLTILPFFMFDLGIVYVILATLLNIGWLALSIYGFKMEDSIKWA KWMFVYSLNYMTILFVAMVVISIFL" misc_feature complement(2138907..2139779) /gene="ctaB" /locus_tag="lmo2057" /note="protoheme IX farnesyltransferase; Provisional; Region: PRK04375" /db_xref="CDD:235293" regulatory complement(2139817..2139822) /regulatory_class="ribosome_binding_site" regulatory 2140028..2140033 /regulatory_class="ribosome_binding_site" gene 2140046..2140963 /gene="ctaA" /locus_tag="lmo2058" /db_xref="GeneID:984460" CDS 2140046..2140963 /gene="ctaA" /locus_tag="lmo2058" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="heme O oxygenase" /protein_id="NP_465582.1" /db_xref="GeneID:984460" /translation="MKKFLKVWSVLTIICMTVVVFGGALVTKTGSADGCGNSWPLCNG QLVRLTDVTPEKLIEFMHRMTTGISSIFVIVLAICAWIYMKNRRETKPLAIIAVLFLI IQALMGMAAVVWGQNPYIMALHFGISIICYASIVLLALMIFEVDRKFDARNLVMGTKL RVNIYALTIYTYLAVYTGALVRHEKASMAVPVWPFENGHFIMPTSVQDYVQYFHRLAA FILIVWLLYVTWLVFRDYRRYRVLTFSMVLSLVFIALQAVTGALSVYTGVNLYIALAH SLIITMLFALLCYLCLLASRSKSNRLRIK" misc_feature 2140046..2140891 /gene="ctaA" /locus_tag="lmo2058" /note="Heme A synthase [Coenzyme transport and metabolism]; Region: CtaA; COG1612" /db_xref="CDD:441220" regulatory 2140972..2140994 /regulatory_class="terminator" regulatory 2141057..2141062 /regulatory_class="ribosome_binding_site" gene 2141071..2141814 /locus_tag="lmo2059" /db_xref="GeneID:988010" CDS 2141071..2141814 /locus_tag="lmo2059" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="potassium channel protein" /protein_id="NP_465583.1" /db_xref="GeneID:988010" /translation="MDKTKRKMIYETFMLILILLSLALLPYRNNFTFILNWIIWVIFT LDYLVRLYRADNKWHYVKTHPFQLIAIIPFYGGFRAARIVSFVHLLSITAMGRRYIVP IYSFFRSNGLNRFLMIFVLLVIIIPVPMVFIEPEINNYPDALWWAIVTATTVGYGDIV PVTPIGRILASIMMLFGIAFIGMITSTITNFFRAKKPTNSSTQRANKITQLISETPDL TKEEIAVVEQFLTLRKKELADENTKSDSE" misc_feature 2141146..2141634 /locus_tag="lmo2059" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2141419..2141649 /locus_tag="lmo2059" /note="Ion channel; Region: Ion_trans_2; pfam07885" /db_xref="CDD:462301" regulatory 2141799..2141821 /regulatory_class="terminator" regulatory complement(2141801..2141823) /regulatory_class="terminator" gene complement(2141820..2142461) /locus_tag="lmo2060" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984801" CDS complement(2141820..2142461) /locus_tag="lmo2060" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465584.1" /db_xref="GeneID:984801" /translation="MERKIMHLAVGKPKELNLSNNKRMMTGIEKKLVQSAYLTTTGFE NDAPHNLKYHGGPDRTVCIYPYEHYAKWTEMFGEELQVTAFGENLITTNMLESSVQIG DKFQIGETVIQITEARNPCSTIEKFNGIPNLYKAIHKTGLTGYLCRTITPGIIHATDE IKQIHQESHGVTVAFCHEKVLHKKGTKEDLERILAVEALSERYRDQVEKQIKK" misc_feature complement(2141940..2142452) /locus_tag="lmo2060" /note="N-hydroxylaminopurine reductase YiiM, contains MOSC domain [Nucleotide transport and metabolism, Defense mechanisms]; Region: YiiM; COG2258" /db_xref="CDD:441859" misc_feature complement(2141823..2141951) /locus_tag="lmo2060" /note="3-alpha domain; Region: 3-alpha; pfam03475" /db_xref="CDD:460938" regulatory complement(2142468..2142473) /regulatory_class="ribosome_binding_site" gene complement(2142480..2143097) /locus_tag="lmo2061" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987917" CDS complement(2142480..2143097) /locus_tag="lmo2061" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465585.1" /db_xref="GeneID:987917" /translation="MKKIMSSIVVLLAVFIIPFQASAHVSVLPSESTVDSWETYTMKV PSEKDAASKKIVLKVTKGVSFESYEPVPGWTTTIDKKNGTVTWQTEGSGIEKGQFQRF SFIAKNPSEEGEVPWNAYQYYEDGSIVEWVGAEDSETPHATTKIVKESSKSATGSHGE VVAGAENTAGDTSSSGDNTILLWTAVAISVIALITGILAILSRKK" misc_feature complement(2142648..2143037) /locus_tag="lmo2061" /note="Reeler-like domain of YcnI and similar proteins; Region: YcnI_like; cd08545" /db_xref="CDD:260082" regulatory complement(2143103..2143108) /regulatory_class="ribosome_binding_site" gene complement(2143109..2144734) /locus_tag="lmo2062" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987920" CDS complement(2143109..2144734) /locus_tag="lmo2062" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="copper transporter" /protein_id="NP_465586.1" /db_xref="GeneID:987920" /translation="MKLLKRVSFFLIILYLLIVPVQHVSAHAYLENSNPADQSHIQTA PEKVTLVFNEEIEADFPLIEVKDSSGKQVETGKTSVSKKNNHMVEASLPADLKADVYS VSWRVVSADGHAVTGIISFKLGDTKATFQASEVPSSGADLQISSIQKAILYIGFSLFI GVLVFGLGLYPRKEQISEKISGHLKKVTWIALALLGVALLIQLFVQTSITTGVSISES FGPSKLAAFLTTKTGYIWISEFVVWLLLAIFTVMMFFKKKQWGWFALLTESALIGYLI FAKAQNGHAAASADKIVSITADMLHMIAASVWVGGILVLLFVLPRTGKARKVWIRFAI VAIIAVASILVSGLLMAVMNIGQMANLFTTNYGKILLFKIGLFILMALLGLGHYIYIK LKNQQLPFKTILIELIIGTIILVVASVLTNVQTPPPSAPKAFDETIAAEGEKAKINLR VEPATVGQNQFIITFTSADGSAKTDFEQVTITTKSTKTDEKSTFQAKLANDTQYFAEG LYFNQTGKWEITVHGLTKDFTDINQTFTTNITQ" misc_feature complement(2144360..2144734) /locus_tag="lmo2062" /note="Copper-binding protein CopC (methionine-rich) [Inorganic ion transport and metabolism]; Region: CopC; COG2372" /db_xref="CDD:441939" misc_feature complement(2143337..2144065) /locus_tag="lmo2062" /note="Putative copper export protein [Inorganic ion transport and metabolism]; Region: PcoD; COG1276" /db_xref="CDD:440887" regulatory complement(2144740..2144745) /regulatory_class="ribosome_binding_site" regulatory 2144860..2144865 /regulatory_class="ribosome_binding_site" gene 2144874..2145065 /locus_tag="lmo2063" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984792" CDS 2144874..2145065 /locus_tag="lmo2063" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2063" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465587.1" /db_xref="GeneID:984792" /translation="MLRYIELFFMFAFVTLITMWIQALLAKWQPTILRSFWLRTLTFI IIGYALMAPTLYIGSLLLK" regulatory 2145112..2145117 /regulatory_class="ribosome_binding_site" gene 2145127..2145513 /gene="mscL" /locus_tag="lmo2064" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984800" CDS 2145127..2145513 /gene="mscL" /locus_tag="lmo2064" /experiment="EXISTENCE:[PMID:19448609]" /note="homopentamer; channel that opens in response to pressure or hypoosmotic shock" /codon_start=1 /transl_table=11 /product="large-conductance mechanosensitive channel protein" /protein_id="NP_465588.1" /db_xref="GeneID:984800" /translation="MKKMLVEFRDFALKGNVLDLAVAVVIGAAFGKIVSSLVDNIIMP LVGVLLGGLDFTDLSFKVGKSVIQYGAFIQSIVDFIIIAFAIFIFVKVLTSFIKKKEQ TVEETPVPPTEEYLKEIRDLLKEQQK" misc_feature 2145136..2145510 /gene="mscL" /locus_tag="lmo2064" /note="large conductance mechanosensitive channel protein MscL; Region: mscL; PRK13953" /db_xref="CDD:184415" regulatory 2145524..2145543 /regulatory_class="terminator" regulatory complement(2145624..2145643) /regulatory_class="terminator" gene complement(2145652..2146044) /locus_tag="lmo2065" /db_xref="GeneID:987927" CDS complement(2145652..2146044) /locus_tag="lmo2065" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2065" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465589.1" /db_xref="GeneID:987927" /translation="MNWTRISSIIIVGFTAIGAIYGGLSMVFMPSGGLLSLSTGLLDG SPFVDYLVPGIFLFVFVGLFHLAALIYLLKKLPRTKEVMFAAAAVLAVWMIVQLLIIG YVFILQIIFLVVAAVEMFLAIQLKKQQR" regulatory complement(2146050..2146055) /regulatory_class="ribosome_binding_site" gene complement(2146089..2146298) /locus_tag="lmo2066" /db_xref="GeneID:984796" CDS complement(2146089..2146298) /locus_tag="lmo2066" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2066" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465590.1" /db_xref="GeneID:984796" /translation="MRENSIIGRIIAFCAICFAFFNPKTVTYWLGVRAESGPAWYLTT VVACGIAVFVLIDLIKKIKRRKAAE" regulatory complement(2146309..2146314) /regulatory_class="ribosome_binding_site" regulatory complement(2146414..2146440) /regulatory_class="terminator" gene complement(2146449..2147426) /locus_tag="lmo2067" /db_xref="GeneID:984795" CDS complement(2146449..2147426) /locus_tag="lmo2067" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="bile acid hydrolase" /protein_id="NP_465591.1" /db_xref="GeneID:984795" /translation="MCTSITYTTKDHYFGRNFDYELSYKEVVVVTPKNYPFHFRKVED IEKHYALIGIAAVMENYPLYYDATNEKGLSMAGLNFSGNADYKDFAEGKDNVTPFEFI PWILGQCATVKEARRLLQRINLVNISFSENLPLSPLHWLMADQTESIVVECVKDGLHI YDNPVGVLTNNPTFDYQLFNLNNYRVLSSETPENNFSKEIDLDAYSRGMGGIGLPGDL SSMSRFVKATFTKLNSVSGDSESESISQFFHILGSVEQQKGLCDVGGGKYEHTIYSSC CNIDKGIYYYRTYGNSQITGVDMHQEDLESKELAIYPLVNEQRLNIVNK" misc_feature complement(2146494..2147426) /locus_tag="lmo2067" /note="choloylglycine hydrolase; Region: bile_salt_hydro; NF038245" /db_xref="CDD:468428" regulatory complement(2147435..2147440) /regulatory_class="ribosome_binding_site" regulatory complement(2147633..2147656) /regulatory_class="terminator" gene complement(2147684..2149312) /gene="groEL" /locus_tag="lmo2068" /db_xref="GeneID:987925" CDS complement(2147684..2149312) /gene="groEL" /locus_tag="lmo2068" /experiment="EXISTENCE:[PMID:19448609]" /note="60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth" /codon_start=1 /transl_table=11 /product="molecular chaperone GroEL" /protein_id="NP_465592.1" /db_xref="GeneID:987925" /translation="MAKDIKFSEDARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFG SPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEG LKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIESKESIAQVAAISSGDEEVGKLI AEAMERVGNDGVITIEESKGFATELDVVEGMQFDRGYTSPYMVTDSDKMEAVLEKPYI LITDKKINNIQEILPVLEQVVQQGRPMLIIAEDVEGEAQATLVLNKLRGTFNVVAVKA PGFGDRRKAMLEDIAILTGGQVITEDLGLELKTATVDQLGTANKVVVTKDDTTIVEGA GDSTQISARVNQIRAQMEETTSEFDREKLQERLAKLAGGVAVVKVGAATETELKERKL RIEDALNSTRAAVEEGIVAGGGTALVSIYNKVAALEAEGDVETGINIVLRSLEEPVRQ IAHNAGLEGSVIVERLKHEAVGVGFNAANGEWVNMIDAGIVDPTKVTRSALQNASSVA ALLLTTEAVVADKPDENGPAAVPDMGMGGMGGMM" misc_feature complement(2147720..2149312) /gene="groEL" /locus_tag="lmo2068" /note="chaperonin GroEL; Reviewed; Region: groEL; PRK00013" /db_xref="CDD:234573" misc_feature complement(order(2147756..2147776,2147783..2147785, 2147945..2147947,2148161..2148163,2148167..2148169, 2148548..2148550,2148632..2148634,2148728..2148730, 2149088..2149090,2149097..2149099,2149109..2149111, 2149133..2149135,2149139..2149141,2149169..2149171, 2149175..2149180,2149193..2149195,2149199..2149210, 2149241..2149243,2149292..2149294,2149304..2149306)) /gene="groEL" /locus_tag="lmo2068" /note="ring oligomerisation interface [polypeptide binding]; other site" /db_xref="CDD:239460" misc_feature complement(order(2147837..2147839,2147843..2147845, 2147960..2147962,2148074..2148076,2148125..2148127, 2148866..2148868,2149043..2149045,2149055..2149057, 2149217..2149225)) /gene="groEL" /locus_tag="lmo2068" /note="ATP/Mg binding site [chemical binding]; other site" /db_xref="CDD:239460" misc_feature complement(order(2147921..2147923,2147930..2147935, 2147939..2147941,2147966..2147968,2148020..2148022, 2148989..2148991)) /gene="groEL" /locus_tag="lmo2068" /note="stacking interactions [active]" /db_xref="CDD:239460" misc_feature complement(order(2148089..2148094,2148194..2148196, 2148740..2148742,2148761..2148763,2148893..2148895)) /gene="groEL" /locus_tag="lmo2068" /note="hinge regions; other site" /db_xref="CDD:239460" regulatory complement(2149323..2149328) /regulatory_class="ribosome_binding_site" gene complement(2149348..2149632) /gene="groES" /locus_tag="lmo2069" /db_xref="GeneID:985586" CDS complement(2149348..2149632) /gene="groES" /locus_tag="lmo2069" /experiment="EXISTENCE:[PMID:19448609]" /note="10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring" /codon_start=1 /transl_table=11 /product="co-chaperonin GroES" /protein_id="NP_465593.1" /db_xref="GeneID:985586" /translation="MLKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGS GRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAITK" misc_feature complement(2149357..2149632) /gene="groES" /locus_tag="lmo2069" /note="Co-chaperonin GroES (HSP10) [Posttranslational modification, protein turnover, chaperones]; Region: GroES; COG0234" /db_xref="CDD:440004" regulatory complement(2149642..2149647) /regulatory_class="ribosome_binding_site" regulatory 2149854..2149859 /regulatory_class="ribosome_binding_site" gene 2149868..2150554 /locus_tag="lmo2070" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986695" CDS 2149868..2150554 /locus_tag="lmo2070" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465594.1" /db_xref="GeneID:986695" /translation="MAKRYITIVLVYLLLLFSASAGIPIIQHVLLSTTSLSIEDAASY GMVIWSIFSNLLSLAIIIPMLYRKPKENKIELGEKTKPLLSIVWIVGGVIGLYAAQIV CSIIITLISGDLSNSANTELLVDLTKAAPIFLIFISILGPILEELVFRKVVFGGLSNV MNIHVAAVISSLFFGLLHGDISFLLTYFVIGLILCFLYTKTKRIVVSMGAHILMNTIV LLLSLGIIGG" misc_feature 2150258..2150530 /locus_tag="lmo2070" /note="Membrane protease YdiL, CAAX protease family [Posttranslational modification, protein turnover, chaperones]; Region: YdiL; COG1266" /db_xref="CDD:440877" regulatory 2150546..2150550 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2070" gene 2150556..2150759 /locus_tag="lmo2071" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985572" CDS 2150556..2150759 /locus_tag="lmo2071" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2071" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465595.1" /db_xref="GeneID:985572" /translation="MKNSLMKQSFLYFALGLVFVYFVVVRVADYGYDVLAYILIIMTL MDFGIGIGLIITGFKRRKKTCRK" regulatory 2150744..2150789 /regulatory_class="terminator" regulatory complement(2150746..2150780) /regulatory_class="terminator" gene complement(2150786..2151433) /locus_tag="lmo2072" /db_xref="GeneID:984371" CDS complement(2150786..2151433) /locus_tag="lmo2072" /experiment="EXISTENCE:[PMID:19448609]" /note="modulates transcription in response to the NADH/NAD(+) redox state" /codon_start=1 /transl_table=11 /product="redox-sensing transcriptional repressor Rex" /protein_id="NP_465596.1" /db_xref="GeneID:984371" /translation="MMEETTKIPQATAKRLPLYHRYLKYLDESGKERVSSAELSEAVK VDSATIRRDFSYFGALGKKGYGYNVSYILDFFSKTLSQDKQTNVALIGVGNLGTALLH YNFMKNNNIKIVAAFDVDPAKVGSVQQDIPIYHLNDMEEIVRENGVEVVILTVPADEA QVTVDRLIEADVKGILNFTPARISVPKQVRVHHIDLTTELQTLIYFLENYPAKTE" misc_feature complement(2150792..2151430) /locus_tag="lmo2072" /note="redox-sensing transcriptional repressor Rex; Provisional; Region: PRK05472" /db_xref="CDD:235486" regulatory complement(2151444..2151449) /regulatory_class="ribosome_binding_site" regulatory 2151729..2151734 /regulatory_class="ribosome_binding_site" gene 2151744..2153696 /locus_tag="lmo2073" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984372" CDS 2151744..2153696 /locus_tag="lmo2073" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465597.1" /db_xref="GeneID:984372" /translation="MILLQVQQISKFFGAEVILDNIKLEVKTGDRIALVGRNGAGKST LLKIIAGKMSYDGGTISKPKSVEIGYLAQNTGLESSKTIWDEMLSVFDSLRKMEADLR KMELRLGEPELYNDPEKYQALMTDYDTLQHTFKESGGYTYEAEIRSVLNGLRFYPEDY EVEIASLSGGQKTRLALAKLLLAKQDILVLDEPTNHLDIETLAWLETYLQNYHGSLLI VSHDRYFLDKVVNQVYEISRTKIDYYKGNYSSFVNQKQAKLEQMWKEFDKQQKQIAKL EDFVARNIVRASTTKRAQSRRKQLEKMDVLGRPQGDEKAAHFGFQFEKQTGKDVLMVD QLSIGYAKDKRIASNLTFEMKRQDSLALVGPNGIGKSTLLKTLIRDIPALSGEFHFGA GVKIGYYDQEQAKLTSNKTVLMELWDDYPELNEVNVRTTLGNFLFSDDDVLKNVQSLS GGEKARLALAKLTLLEANVLILDEPTNHLDIESKEVLEAALIDFEGTILFVSHDRYFI NRIASKIVELAPEKATVFLGDYDYYQEKLAEEKELARLDAEDRRKKGEQVEATASVRK LNYQEEKEQQKLLRQRKRKLEEIEKSMEETDEKIAELELQLTNPEVFQDHEKALEITQ ELDAVKADGEKLMEEWEQISEELESI" misc_feature 2151759..2153351 /locus_tag="lmo2073" /note="ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]; Region: Uup; COG0488" /db_xref="CDD:440254" misc_feature 2153337..>2153507 /locus_tag="lmo2073" /note="Family of unknown function (DUF6594); Region: DUF6594; pfam20237" /db_xref="CDD:466388" misc_feature 2153472..2153678 /locus_tag="lmo2073" /note="ABC transporter C-terminal domain; Region: ABC_tran_CTD; pfam16326" /db_xref="CDD:465095" regulatory 2153709..2153714 /regulatory_class="ribosome_binding_site" gene 2153720..2154679 /locus_tag="lmo2074" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987923" CDS 2153720..2154679 /locus_tag="lmo2074" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465598.1" /db_xref="GeneID:987923" /translation="MKKILIISSSIIVGLLVIITICASFYLYSYALARDNSSMNDTAT TDETTDTAKLAKKNREANVAWMEKQNLIKWTETSADNLKLVANYLPADIPSNTTIILA HGYRGKSGKVEMAGLARMYHEKFGYNVLMPDARAHGESEGDNIGFGWPERKDYVQWID QVIDKNGTDTQIALHGVSMGSSTVLMTSGEKLPKQVKSIIADCGYTSMDAELSYQLKA MFHLPKFPIIPTASLINKFKEGFFFSEASAVDAVAKTDLPIFYIHGDADAFVPTYMVD ELYDATNSYKEKWIVKGAEHGQAFTVDPKTYEEKVRQFLNKTM" misc_feature 2153912..2154676 /locus_tag="lmo2074" /note="Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; Region: FrsA; COG1073" /db_xref="CDD:440691" gene 2154765..2155058 /locus_tag="lmos79" /db_xref="GeneID:18245164" misc_RNA 2154765..2155058 /locus_tag="lmos79" /product="rli46" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245164" gene 2154775..2154852 /locus_tag="lmos80" /db_xref="GeneID:18245119" misc_RNA 2154775..2154852 /locus_tag="lmos80" /product="rli45" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245119" regulatory complement(2155152..2155191) /regulatory_class="terminator" gene complement(2155223..2156245) /locus_tag="lmo2075" /gene_synonym="gcp" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984790" CDS complement(2155223..2156245) /locus_tag="lmo2075" /gene_synonym="gcp" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA-binding/iron metalloprotein/AP endonuclease" /protein_id="NP_465599.2" /db_xref="GeneID:984790" /translation="MKKNTLILGIESSCDETAASVVKNGNEIISSVVASQIESHKRFG GVVPEIASRHHVEQITLVIEEALKQANVTMDDLDGVAVTEGPGLVGALLIGVNAAKTL AFMHNLPLVGVHHIAGHIYANRFETEFKFPLLSLVVSGGHTELVLMKADNEFEIIGET RDDAAGEAYDKVARTLGLAYPGGVQIDKLAKDGEDTFHFPRAMMDEGSFDFSFSGLKS SFINTLHNLRQRGEEPNPNDMAASFQASVVDVLVSKTIRAAKQYDVKQLLLAGGVAAN QGLRERLIQEVKLELPETELIIPPLALCGDNAAMIAAAGTVSFLQGKRSGFDMNANPG LLLEDI" misc_feature complement(2155235..2156230) /locus_tag="lmo2075" /gene_synonym="gcp" /note="tRNA A37 threonylcarbamoyltransferase TsaD [Translation, ribosomal structure and biogenesis]; Region: TsaD; COG0533" /db_xref="CDD:440299" gene complement(2156242..2156697) /locus_tag="lmo2076" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984782" CDS complement(2156242..2156697) /locus_tag="lmo2076" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alanine acetyltransferase" /protein_id="NP_465600.1" /db_xref="GeneID:984782" /translation="MSLEEALLFREATVTDLKSIMNVENAAFTVPWTEAAFRNEFIIN QYAYYLLAIYKEQVVGYAGVWLVLDEGHITNIAIHPDYQGNHYGEALLREMIRVAKER GVVRMTLEVRVSNDVAQGLYKKLGFQDGAIRKNYYPDTKEDALVMWVDL" misc_feature complement(2156257..2156652) /locus_tag="lmo2076" /note="ribosomal-protein-alanine acetyltransferase; Region: rimI; TIGR01575" /db_xref="CDD:273701" misc_feature complement(order(2156431..2156436,2156464..2156472)) /locus_tag="lmo2076" /note="Coenzyme A binding pocket [chemical binding]; other site" /db_xref="CDD:173926" regulatory complement(2156269..2156275) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2076" gene complement(2156694..2157386) /locus_tag="lmo2077" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987921" CDS complement(2156694..2157386) /locus_tag="lmo2077" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycoprotease" /protein_id="NP_465601.1" /db_xref="GeneID:987921" /translation="MILGMDTSSDTMTIALFNEGVVIGEYTTNLRKNHSVRLLPAIAV LMEECGVKPTDLEKIAVAKGPGSYTGLRIGVTVAKTMAWDAGIPIVGISSLALLAENG LYFPGKVVALMDARRGNVYAGVYQVTEGKMQSVIADGHIALTELLEQFAPSEELILFV GTLTEQICVTVTEVLGERAVFAQADYTYSRASSLVKLAENLDGEPADNFVPDYLKLAE AESKWLESRGSE" misc_feature complement(2156706..2157386) /locus_tag="lmo2077" /note="tRNA A37 threonylcarbamoyladenosine modification protein TsaB [Translation, ribosomal structure and biogenesis]; Region: TsaB; COG1214" /db_xref="CDD:440827" regulatory complement(2156706..2156711) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2077" gene complement(2157383..2157844) /locus_tag="lmo2078" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987047" CDS complement(2157383..2157844) /locus_tag="lmo2078" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465602.1" /db_xref="GeneID:987047" /translation="MEFELIMTSERETRLLAKQLGENLTAGDVILLEGDLGAGKTTFT KGLGEGLLIPQMIKSPTFTIIREYKKGRLPLYHMDVYRLEDTSADELGLEEYFYGAGV SVVEWAQFVREDLPEEYLEIKLFHIDENTRKIVVKPVGQRYEQLAMEVFGK" misc_feature complement(2157407..2157820) /locus_tag="lmo2078" /note="tRNA A37 threonylcarbamoyladenosine biosynthesis protein TsaE [Translation, ribosomal structure and biogenesis]; Region: TsaE; COG0802" /db_xref="CDD:440565" regulatory complement(2157397..2157402) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2078" regulatory complement(2157854..2157859) /regulatory_class="ribosome_binding_site" regulatory complement(2157915..2157936) /regulatory_class="terminator" gene complement(2157949..2159094) /locus_tag="lmo2079" /db_xref="GeneID:984776" CDS complement(2157949..2159094) /locus_tag="lmo2079" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2079" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465603.1" /db_xref="GeneID:984776" /translation="MMKKGILLSILLALVLVISACGESAEEKAAKTPQGKFVQTMKNG MNVPDQYTYTTSFAVNDINVSSTDPSAQTMGILKDIKLSVTTSTDKKANKSEAKFNVT STNNLLPISMDLDFLVDSKTGNAYIPLKTIVEPDASLLSYLDQATGGMWSKINTDYPD LKNKYLSTEELTSSLTDQPEAKTAVNTKEIEAASKDLNKKAIKLIDTYFTGLEKDRFK EADDGTVSVTIKNADIANLMNQVAKLMDDEKVKADFKVIAESQGSDAVTDFDSTYAEM KSSLTDAAKELKENKTYLISNKLTVKSGKENSLDTLTLQTKIEDKSDASAPESISFTV KTKAEEFVPIEDFPTKDEVISSEELNKIITDITRKMYGDMDISGTNY" regulatory complement(2159098..2159103) /regulatory_class="ribosome_binding_site" regulatory complement(2159199..2159221) /regulatory_class="terminator" gene complement(2159224..2159604) /locus_tag="lmo2080" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984774" CDS complement(2159224..2159604) /locus_tag="lmo2080" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2080" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465604.1" /db_xref="GeneID:984774" /translation="MTGFKKVILPVLLVVLFLAGCNQAEVPALVLDGTITDTSLLENN NELTVNGTLTWNGEKNDYASEVMITVSSNTAVTNATTGKAMKLADIKEEDTVRAVFPQ GSNITSPAPGKVSENATSLKVTPK" regulatory complement(2159613..2159618) /regulatory_class="ribosome_binding_site" gene complement(2159697..2160053) /locus_tag="lmo2081" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987918" CDS complement(2159697..2160053) /locus_tag="lmo2081" /experiment="EXISTENCE:[PMID:19448609]" /note="may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling" /codon_start=1 /transl_table=11 /product="camphor resistance protein CrcB" /protein_id="NP_465605.1" /db_xref="GeneID:987918" /translation="MLVNFLLVGFGAALGAMLRYGISVLVKSKWKTNFPSATFFINIT GSFLLGFLVSSALGPVWQLFLGTGFMGGYTTFSTFKVESMELKWKTNYRVLFSYLGFT YVFGLIAAFLGMMLGV" misc_feature complement(2159700..2160053) /locus_tag="lmo2081" /note="fluoride efflux transporter CrcB; Region: PRK14214" /db_xref="CDD:184571" gene complement(2160043..2160432) /locus_tag="lmo2082" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984773" CDS complement(2160043..2160432) /locus_tag="lmo2082" /experiment="EXISTENCE:[PMID:19448609]" /note="may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling" /codon_start=1 /transl_table=11 /product="camphor resistance protein CrcB" /protein_id="NP_465606.1" /db_xref="GeneID:984773" /translation="MYFLYVGVFGALGGMCRYAMNLWLGGGDFPSATLAVNLIGCFLL AFLMRFLAEKSRVSLVLLNGIGTGFIGAFTTFSAFSVDTIQLVQSGAWLFAVSYVLAS FIGGLIMVKFGRMLSNKLLNRGEHRVG" misc_feature complement(2160049..2160432) /locus_tag="lmo2082" /note="fluoride efflux transporter CrcB; Region: PRK14231" /db_xref="CDD:184579" regulatory complement(2160062..2160067) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2082" regulatory complement(2160440..2160446) /regulatory_class="ribosome_binding_site" regulatory complement(2160459..2160487) /regulatory_class="terminator" gene complement(2160538..2161164) /locus_tag="lmo2083" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984857" CDS complement(2160538..2161164) /locus_tag="lmo2083" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2083" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465607.1" /db_xref="GeneID:984857" /translation="MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGE EYQKAVQSLYAIAYTIKMSKMGETRLNGYADFVVPPLEGFWWSEEKFDLKDRDAWLWT SILRQPDFVTEEVLEWAKEVAQKKKPDVDTSRVKLVRFEEGECVQMMHIGPFSEEVKT VAELHQFMETEGLHNDTGAVRKHHEIYLSDPRKADPEKMKTILRLPVS" misc_feature complement(2160541..2161155) /locus_tag="lmo2083" /note="Cyclopropanoid cyclopropyl hydrolase, GyrI-like domain [Defense mechanisms, Signal transduction mechanisms]; Region: MA1133; COG4832" /db_xref="CDD:443860" gene complement(2161161..2162054) /locus_tag="lmo2084" /db_xref="GeneID:984631" CDS complement(2161161..2162054) /locus_tag="lmo2084" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2084" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465608.1" /db_xref="GeneID:984631" /translation="MDVTQLKMLHNAKVISEIKKGFSVDRKYQVDETYLVRVFPIDLL QERKQEFKIIQALDSQTPFVPKAYDFGFIEREGYMIISYLRGEDAESGMTHLSHSEQF KAGFSAGEILREVHKIPLDIPKMNWLDFQTAKFKRKVEELKELEITASFLTDTEKFVY KNIARLKNRPICLQHGDFHPANIILNNKKFVGLIDFNRLEFGDPLFDLAKIGFFTTEV SIPFARGNILGYIDKEEVTDFWNLYALYTAMHITSAVSWAAKNESRNFKKLMDYAVKT AASHDNFQKIVPNWMNEEEFK" misc_feature complement(2161359..2162015) /locus_tag="lmo2084" /note="Phosphotransferase enzyme family; Region: APH; pfam01636" /db_xref="CDD:426359" regulatory complement(2161172..2161177) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2084" regulatory complement(2162063..2162068) /regulatory_class="ribosome_binding_site" gene 2162187..2162273 /locus_tag="lmot40" /db_xref="GeneID:3167618" tRNA 2162187..2162273 /locus_tag="lmot40" /product="tRNA-Leu" /db_xref="GeneID:3167618" regulatory complement(2162284..2162308) /regulatory_class="terminator" gene complement(2162323..2164011) /locus_tag="lmo2085" /db_xref="GeneID:984772" CDS complement(2162323..2164011) /locus_tag="lmo2085" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan binding protein" /protein_id="NP_465609.1" /db_xref="GeneID:984772" /translation="MQRKLIGSFFILMVLLIIGSTSEKVQASPTSSNGWQLKWAIKNN DFEDVDITDYGQNAGTTNVWMVNQAGVDAWGTTNPTGNIEVWQNGNGYNVPAFSGNNF IELNSDGIGPVYQDIRTIPGSNLTWKFSHRGRTGVDTADLLIGSPESQTEVSRVSNGE TWGSFEGNYTVPAGQTITRLTFNPISTANGSLTSGNFLDDVQLYINVNGAKIGDVVWY DFNGDGIQQDSEEPAPGVKVDLLTKDGTFKESATTNNIGSYLFTDVLPGDYQVKFSLP NNDFIFSKANQGNDKSLNSKPDKTGIASVNVPNLKSENFDIDAGITTNGKVEIQKLSG DKALSGAVYAIKDNSQSEVAKITTNQNGTGTAEGLPPGNYTATEVTAPLGYQKNTTPK KFTITYGDTNPVKLTFQNAEKTGSITIFKQDEANKKGLANAVFDVKSIDGTTLKKVTT NSKGYALAENLQPGTYVITEVTAPPGYEKSANEIRVTIPFNPQKTINITFSDNKIMVP LKPTPTKGSTVVKVSGETTKITALPQTGDSSSSSTIFTGLLIVVASGLFVYRRY" misc_feature complement(2162380..>2163471) /locus_tag="lmo2085" /note="Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis]; Region: ClfA; COG4932" /db_xref="CDD:443959" misc_feature complement(2163049..2163384) /locus_tag="lmo2085" /note="SdrD B-like domain; Region: SdrD_B; pfam17210" /db_xref="CDD:435789" misc_feature complement(2162329..2162418) /locus_tag="lmo2085" /note="LPXTG-motif cell wall anchor domain; Region: LPXTG_anchor; TIGR01167" /db_xref="CDD:273478" regulatory complement(2164019..2164024) /regulatory_class="ribosome_binding_site" regulatory complement(2164075..2164096) /regulatory_class="terminator" gene complement(2164106..2165377) /locus_tag="lmo2086" /db_xref="GeneID:987915" CDS complement(2164106..2165377) /locus_tag="lmo2086" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465610.1" /db_xref="GeneID:987915" /translation="MNLIGLRIKNIRKEKQLTLKDVAQGIISVPYLANIENGIKVASL ETLIHIARRLEIPEEVLLMSEDEENRALLKELDEIFELLVCSNPKEIESRLKKIDENV ELQHESPAVELSFYCLQVAFYYKTWKFSRAEEVEAKYLKNAEKRVENAFPLQLLSYYY YGQAVKHSHATCNYQLAVEYWEKCVALTDNKNFLTVFHVCICINYICQSIYEPALGHI QQAWDLIKDEEQERFVSILYFYGYIYFQIGFIGEAKYRFKQAQKYFSKYPEAKKIYYF VVQLKMAEIENIEGNETLFYEKITCLYKEIMAYKTTNISFNNNDYLVITELMVIFAEK GFVEEATSLMGLMNKVVERVQELNYFMEYTEILLLYQQDEQVSYEKKMIKLLKKIDAS NDPVLIERVKKHASKHFAKSTKYKMAYDILS" misc_feature complement(2165144..2165377) /locus_tag="lmo2086" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" regulatory complement(2165388..2165394) /regulatory_class="ribosome_binding_site" gene complement(2166012..2167343) /locus_tag="lmo2087" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984768" CDS complement(2166012..2167343) /locus_tag="lmo2087" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465611.1" /db_xref="GeneID:984768" /translation="MAKNMEILETDSVKKIYFRYLIPSLVGMLLMSLNIVIDGIFVGH KLGGVALAGINIAVPVFTIFTAISIWIGIGAATQFSFAIGEKNVAKAQTIFTNAILAV VSITVIIGIIAFIFKVPLAYFLGANDDTIGYVLEYMNILLVFGFALTLENILSIFVRN DGDPNLSMIALIVTAISNVILNYLFLFVFEWGVTGSALATMIAIIIGVLILTTHFFKK SSRLKFVKVDWNKAFFKKTLAIGLPSFLAEVGVSVFTLGYNISIAAIAGTAGVAAFSV LNYTHSVILMLFLGMGSAIQPLISYYRGAKARQKELETLKIAIVVAFSTGVGFLLVGF FGSNLLVSMFGNFSVEIRELASNGIKLFYTAYLFMGFNFVMMTYFQTSDKVKMATWIT ISREIIFMVIFLLVLPPIIGIPGVWLAIPISEMIVAASIVFYMKKKHILFK" misc_feature complement(2166015..2167343) /locus_tag="lmo2087" /note="multidrug efflux MATE transporter FepA; Region: MATE_multi_FepA; NF000217" /db_xref="CDD:411080" regulatory complement(2167350..2167355) /regulatory_class="ribosome_binding_site" gene complement(2167353..2167943) /locus_tag="lmo2088" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984767" CDS complement(2167353..2167943) /locus_tag="lmo2088" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_465612.1" /db_xref="GeneID:984767" /translation="MRKEEIKQAALTLFANNGFEGTSLADIAGVVGLKKQSIYSHFKD KDDLFLSIMKDAKSTEIDYYRAKLRDSDLSRPDLVLSSLLFGVKELYDTDEAYQFWLR YGFYPPKHLYEVVQADITENVLQMEHEFTDLFSNWMEQKLIPMQDVETMKEAYMGILD AVIVDIVYVNDPERTEKKITALWQIFWRGITLKALN" misc_feature complement(2167461..2167940) /locus_tag="lmo2088" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" regulatory complement(2167953..2167958) /regulatory_class="ribosome_binding_site" regulatory complement(2168023..2168044) /regulatory_class="terminator" gene complement(2168054..2169097) /locus_tag="lmo2089" /db_xref="GeneID:984766" CDS complement(2168054..2169097) /locus_tag="lmo2089" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="lipase" /protein_id="NP_465613.1" /db_xref="GeneID:984766" /translation="MKNTIKWIAIGFAGIILLPLLIVFFIYKKAVGKKDYNPEVLENL DKASQEFVKNTSPLSDVDSRYKYMRLATKALPSAKDIEIGDVENKKIDGPAGKIPIRI YTPQEDGPFEIIVYYHGGGFVLGGLQTHDAIARKLVQTTGARVVTVDYRLAPENPFPA AVEDAYAALLWVQNHRTSLRAKSSDIIVAGDSVGGNLATVVTQIAKSKGKPNITAQIL LYPATDIFSRDASVLYPSMDEFAEGYVLTKESLDKFFKLYIANASDRKYDPLVAPIRS KDLVGLPKTFIATAEFDPLRDQGEAYAKKLKDAGVEVFAKRFEKVPHGFMTTNSEATD ETYELISEFLEEK" misc_feature complement(<2168897..2169082) /locus_tag="lmo2089" /note="Uncharacterized conserved protein YpmB, contains C-terminal PepSY domain [Function unknown]; Region: YpmB; COG5353" /db_xref="CDD:444134" misc_feature complement(2168120..2168758) /locus_tag="lmo2089" /note="alpha/beta hydrolase fold; Region: Abhydrolase_3; pfam07859" /db_xref="CDD:400284" regulatory complement(2169107..2169112) /regulatory_class="ribosome_binding_site" regulatory 2169298..2169303 /regulatory_class="ribosome_binding_site" gene 2169312..2170526 /gene="argG" /locus_tag="lmo2090" /db_xref="GeneID:984368" CDS 2169312..2170526 /gene="argG" /locus_tag="lmo2090" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming" /codon_start=1 /transl_table=11 /product="argininosuccinate synthase" /protein_id="NP_465614.1" /db_xref="GeneID:984368" /translation="MAKEKIVLAYSGGLDTSVAIQWLVESGYEVIACCLDVGEGKNLD FIKEKAITVGASESYTIDAKEEFAEDFALIALQAHAYYEGKYPLISALSRPLIAKKLV EVARQEGASAIAHGCTGKGNDQVRFEVAIHALAPDLKVVSPVRDWKWSREEEINYAKE HDIPVPIDLDNPFSIDQNLWGRSNECGVLENPWTTPPEAAYDLTVSLEDAPDTADIVE ITFDAGIPISLNGENMSLANLILTLNEIAGKHGVGRIDHIENRLVGIKSREVYECPAA VTLITAHKELEDLTFVREVAHFKPIIEQKISETIYNGLWFSPLTEALVAFLKSTQKFV NGTIRVKLFKGHAIVEGRKSPNSLYDENLATYTSSDTFDQDAAVGFIKLWGLPTKVNA EVNSKVTITTEV" misc_feature 2169318..2170502 /gene="argG" /locus_tag="lmo2090" /note="argininosuccinate synthase; Provisional; Region: PRK00509" /db_xref="CDD:234785" regulatory 2170516..2170521 /regulatory_class="ribosome_binding_site" /gene="argG" /locus_tag="lmo2090" gene 2170530..2171900 /gene="argH" /locus_tag="lmo2091" /db_xref="GeneID:987914" CDS 2170530..2171900 /gene="argH" /locus_tag="lmo2091" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of arginine from (N-L-arginino)succinate" /codon_start=1 /transl_table=11 /product="argininosuccinate lyase" /protein_id="NP_465615.1" /db_xref="GeneID:987914" /translation="MEKLWGGRFQGKSEAWIDDFGASISFDQKMAKEDLAGSLAHVAM LGKCGIIPASEAAEITAGLKILQEKLAFGELEFSTVNEDIHLNIEKLLHEEIGSVAGK LHTARSRNDQVATDMHLYLKQAVAEIIQSLKHLRVVLVQKAELHVETIMPGYTHLQHA QPLSFAHHLLAYFGMFTRDLERLEESVKRIDISPLGSAALAGTTFPIDRAYSAELLGF SAVYENSLDGVSDRDFIIEFLSNSSILMMHLSRFCEELILWTSHEFQFVELTDAFSTG SSIMPQKKNPDMAELIRGKTGRVYGNLFGMLTVLKGLPLAYNKDLQEDKEGMFDTLET VQTSLDIFAGMIETMKVNTEIMEESTQKDFSNATELADYLAKKGVPFREAHEIVGKLV LECTQNGIYLQDVALSHYQEINPLIEEDIYVVLSSKTAVQKRNSYGGTGFDQIKVALE NAKKTL" misc_feature 2170530..2171897 /gene="argH" /locus_tag="lmo2091" /note="argininosuccinate lyase; Provisional; Region: PRK00855" /db_xref="CDD:179143" regulatory 2171907..2171930 /regulatory_class="terminator" regulatory 2172055..2172060 /regulatory_class="ribosome_binding_site" gene 2172068..2173591 /gene="betL" /locus_tag="lmo2092" /db_xref="GeneID:987924" CDS 2172068..2173591 /gene="betL" /locus_tag="lmo2092" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycine betaine transporter BetL" /protein_id="NP_465616.1" /db_xref="GeneID:987924" /translation="MKKLTNVFWGSGFLVLLAVLFGAFLPEQFETFTNHIQKFLTSNF GWYYLIVVAIIIIFCLFLVLSPIGSIRLGKPGEEPGYSNKSWFAMLFSAGMGIGLVFW GAAEPLSHYAVQAPGGEVGTQAAMKDALRYSFFHWGISAWSIYAIVALALAYFKFRKN APGLISATLYPILGKHAKGPIGQLIDIIAVFATVIGVATTLGLGAQQINGGLTYLFGV PNNFTVQFTIIVIVTILFMLSAMSGLDKGIQLLSNVNIYVAGVLLVLTLILGPTLFIM NNFTNSFGDYLQNIIQMSFQTAPDAPDARKWIDSWTIFYWAWWLSWSPFVGIFIARIS RGRTIRQFLLGVIVLPALVSVFWFAVFGGSAIFVEQHGNSGLSSLATEQVLFGVFNEF PGGMMLSIVAMILIAVFFITSADSATFVLGMQTTGGSLNPPNSVKVTWGLLQAGIASV LLYAGGLTALQNASIIAAFPFSIVIILMIVSLFVSLTREQEKLGLYVRPKKSQRSQL" misc_feature 2172086..2173546 /gene="betL" /locus_tag="lmo2092" /note="Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis]; Region: BetT; COG1292" /db_xref="CDD:440903" regulatory 2173598..2173629 /regulatory_class="terminator" regulatory complement(2173598..2173629) /regulatory_class="terminator" gene complement(2173635..2173832) /locus_tag="lmo2093" /db_xref="GeneID:987913" CDS complement(2173635..2173832) /locus_tag="lmo2093" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2093" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465617.1" /db_xref="GeneID:987913" /translation="MEKFLFNATLFASALLLMVGIFKSSIPITAISLVLAVVSQHFFR KKYPKQTRSYREIVAAKQKKG" gene complement(2173836..2174486) /locus_tag="lmo2094" /db_xref="GeneID:984726" CDS complement(2173836..2174486) /locus_tag="lmo2094" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="L-fuculose-phosphate aldolase" /protein_id="NP_465618.1" /db_xref="GeneID:984726" /translation="MLYQKEREDLAKIVKTMFDRFETNAAGGNVSVRMNSEHIIMTPT LMSQAKLCDLSPYEILVVDNNNEVVEGDGRVTREINLHRACYVENPNIGCVLHAHPKE SMLFATLGMELPNLTEATQKIGQIPTLAFAPATSSELAEIVRKHVIELGDKAVPSASL LNKHGIVVLDTSLHKAYDMLERIEYNAYIAEKALVFDALGIKKLAHDRELNYNLEE" misc_feature complement(2173854..2174486) /locus_tag="lmo2094" /note="hypothetical protein; Provisional; Region: PRK06357" /db_xref="CDD:180541" misc_feature complement(order(2173995..2173997,2174190..2174192, 2174196..2174198,2174253..2174261,2174352..2174357, 2174400..2174402)) /locus_tag="lmo2094" /note="active site" /db_xref="CDD:238232" misc_feature complement(order(2173995..2173997,2174190..2174192, 2174196..2174198)) /locus_tag="lmo2094" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:238232" regulatory complement(2173841..2173846) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2094" gene complement(2174488..2175420) /locus_tag="lmo2095" /db_xref="GeneID:984758" CDS complement(2174488..2175420) /locus_tag="lmo2095" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphofructokinase" /protein_id="NP_465619.1" /db_xref="GeneID:984758" /translation="MIYTITLNPAIDRLLFIQGELEKRKTNRVKKTEFDCGGKGLHVS GVLSKFGIKNEALGIAGSDNLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNG STMIPEAGFTVSQTNKVNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKELLRTVKAT GAFLGCDNSGEYLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEENVRKLAEKIPYLVV SLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMPITETLKVATG CSASKVMQQDSSSFDLEAAGKLKNQVSIIQLEER" misc_feature complement(2174563..2175420) /locus_tag="lmo2095" /note="1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose...; Region: FruK_PfkB_like; cd01164" /db_xref="CDD:238570" misc_feature complement(order(2175007..2175009,2175253..2175255, 2175259..2175261,2175277..2175279,2175289..2175291)) /locus_tag="lmo2095" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:238570" misc_feature complement(order(2174668..2174670,2174674..2174676, 2174746..2174748,2174764..2174766,2174860..2174862, 2174866..2174868,2174920..2174922)) /locus_tag="lmo2095" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:238570" regulatory complement(2174496..2174501) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2095" regulatory complement(2175427..2175432) /regulatory_class="ribosome_binding_site" gene complement(2175438..2176787) /locus_tag="lmo2096" /db_xref="GeneID:987825" CDS complement(2175438..2176787) /locus_tag="lmo2096" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS galacticol transporter subunit IIC" /protein_id="NP_465620.1" /db_xref="GeneID:987825" /translation="MESLQSVIQFILNLGAAVFVPALMIIIGLIVRMKVRDAVSAGII LGVAFLGMNIVIGFMIEALTPAAQGLAERTGINLSILDGGWTSMATLAWAWPFAFLMF PLQLGINAIMLVINKTKTLNVDLWNVWGKILTAVLIIGVTQNVYLAFIVAGIQIVTEL ILCDANQRQIQELNGIPGVTVSHGMMIFCIFLMPLDWLLKKIPALRKDMDANALKDKI GIFAENHVMGFIIGGLLGVAAGYDVAKTLMLAMQAAAALTLFPMVAKLFMQALSPLSD GISEFMKRKFKNRELFIGLDWPILAGCSEVWVAIVLMVPVTLIFALILPGNGVLPFAG ILNISLCAPALIVTGGNLIRMIILGTITTPIFLYVSTFFAGTITDLAHSTGAISLKAG QQITWSTLEYPVFRYIFAEASQFTILGFIFVAIWVVLLVFYVKMMKKRTIELEKASS" misc_feature complement(2175462..2176787) /locus_tag="lmo2096" /note="Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism]; Region: SgcC; COG3775" /db_xref="CDD:442989" regulatory complement(2176797..2176802) /regulatory_class="ribosome_binding_site" gene complement(2176815..2177090) /locus_tag="lmo2097" /db_xref="GeneID:984387" CDS complement(2176815..2177090) /locus_tag="lmo2097" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS galacticol transporter subunit IIB" /protein_id="NP_465621.1" /db_xref="GeneID:984387" /translation="MKKVIVACGSGVATSQTVASKVERILKEKGVRATVEAVDIKSLE QHIKTSDVYVAITKANKEFDIPTLNGIAFLTGMGMDEETEKLLNALK" misc_feature complement(2176821..2177087) /locus_tag="lmo2097" /note="subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC...; Region: PTS_IIB_galactitol; cd05566" /db_xref="CDD:99908" misc_feature complement(order(2177046..2177054,2177058..2177069)) /locus_tag="lmo2097" /note="P-loop; other site" /db_xref="CDD:99908" misc_feature complement(order(2177046..2177051,2177058..2177063, 2177067..2177069)) /locus_tag="lmo2097" /note="active site" /db_xref="CDD:99908" misc_feature complement(2177067..2177069) /locus_tag="lmo2097" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99908" gene complement(2177096..2177563) /locus_tag="lmo2098" /db_xref="GeneID:984757" CDS complement(2177096..2177563) /locus_tag="lmo2098" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS galacticol transporter subunit IIA" /protein_id="NP_465622.1" /db_xref="GeneID:984757" /translation="MDYHDLFQKELTLINSRYESQAELFEYTSKILEKEQYVEPTFRE AVTSREVVFPTGLEMNGIKIAIPHTDTIYVKRPFVLVNKLSTPIPFVQMGTVDKWIDV EVIFMLGIKNPQDQVPLLSSIMEKFMEADFVEQIKEINDSNTLCDFLKKQFGE" misc_feature complement(2177114..2177548) /locus_tag="lmo2098" /note="Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; Region: PTS_EIIA_2; pfam00359" /db_xref="CDD:459780" regulatory complement(2177100..2177105) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2098" gene complement(2177571..2179577) /locus_tag="lmo2099" /db_xref="GeneID:987911" CDS complement(2177571..2179577) /locus_tag="lmo2099" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional antiterminator" /protein_id="NP_465623.1" /db_xref="GeneID:987911" /translation="MEQNCKELITYLLLNRQVNLRNVSKNFKVSKEAIGAQITQINHL LKSEPILIDHDMIFVTDVCREACYRLLTAEEQQLFSFYEVNIRRKLIMIKLLLHNHYM SLGALADYVYVSKNTMLTDVKSIKESLHEFEIQLDYSRKDGYAVSGSEFLIRNLLAEL IREVVQTPYGKFVLDEKKLITVSEVFLLKKRLEKVESKLQITFTDEQMEELPYILHGI IKRSKVTNKKWTFKIEMYDIKNTREFPIMKEMFWGYDFLSENDLLYLSLQVLASNLVE SALHFSDSEEIAYAVDEFIRLLEMYFATEIMKKNEFKEKVILHVRPAIYRTILGFQIN NPLKKQFIKEYTPTFNIVEKASKPFEKLVGHKWSEEEIVYLSMIVLGWMYQIEETEQP IFRAVVLCKSGTSISKLLLENLKMMFPNIDFQGAYAVRQLNTVARDIDFIFTTVPVQS DATIFVIPSILSKDSRQILREQVDKAIEMDSHKKTKELLAMLKDEIPEENIRLVQAKV ESFFNKKEQPVEKKEPEQMRITEEQVHFLEMPLEWEQLVSAAFAPMLERGTVDASYIH TCEEIFYQNYEQMMIGPNIYLPHAKPANGVIEQDIQLMIMKANTKTPEDEAVKIMIAL APSEQNKHIPLLLKLNEIFLKPEKLVGILASTNKKKIVEILERG" misc_feature complement(2177895..2179556) /locus_tag="lmo2099" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" misc_feature complement(2177574..2177954) /locus_tag="lmo2099" /note="PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_fru; cl00163" /db_xref="CDD:469635" regulatory complement(2177574..2177579) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2099" regulatory complement(2179587..2179592) /regulatory_class="ribosome_binding_site" regulatory complement(2179742..2179773) /regulatory_class="terminator" gene complement(2179758..2181203) /locus_tag="lmo2100" /db_xref="GeneID:987909" CDS complement(2179758..2181203) /locus_tag="lmo2100" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="NP_465624.1" /db_xref="GeneID:987909" /translation="MWRLTGNSSLPIYLQIVDLIETKIMNGELLPEEKLPPERQLAEM FGVNRSTVVRALDELTARAVIIRKQGSGTTVNAEKWGLFAGQSTNWRHYLTQGGFTPA VPYIRQAGVMERANSDNVIDAASGELPLEMTPKMETPSLSWQSFIAEEQQEDEAGYKP LRETIQKQMKEAYGLQTRSEQIFITSGAQQALFLITQCLLKPGDAVAIESPSYFYSLS LFQSAGLRIFALPMDEDGVVISELRDLYHKHRVKMVFVNPTFQNPTGLVMSLKRRKEL VKICAHLQIPIVEDDPFSELGALDNQIPAPLKRLDTDNVLYIGSLSKIMGSTTRIGWL IGPTAVIERLALARQEMDFGLSIFPQVLANSVLNTAGYKAHLLQLHHVLEQRRDDLIE AFEAILPSEVTFIKPKGGFHLWVKLPVEFRSVRDFDIFLANDLLVMPGFLFGVKEAVI RVTYARLEKKEARRVAEIIKQILVSKKCEEA" misc_feature complement(2179785..2181203) /locus_tag="lmo2100" /note="DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; Region: ARO8; COG1167" /db_xref="CDD:440781" regulatory complement(2181213..2181218) /regulatory_class="ribosome_binding_site" regulatory 2181315..2181320 /regulatory_class="ribosome_binding_site" gene 2181329..2182216 /locus_tag="lmo2101" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984461" CDS 2181329..2182216 /locus_tag="lmo2101" /experiment="EXISTENCE:[PMID:19448609]" /note="with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate" /codon_start=1 /transl_table=11 /product="pyridoxal biosynthesis lyase PdxS" /protein_id="NP_465625.1" /db_xref="GeneID:984461" /translation="MEKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVM ALERVPSDIRAAGGVARMADPRIVEEVMKAVSIPVMAKARIGHITEARVLEAMGVDYI DESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTGNIVE AVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPYELIKEIKTLGKLPVVNFAAGGVAT PADAALMMELGADGVFVGSGIFKSDNPAKFASAIVQATTYYTDYELIGKLSKELGSPM KGIEMSRLNPEDRMQDRSF" misc_feature 2181335..2182207 /locus_tag="lmo2101" /note="pyridoxal 5'-phosphate synthase lyase subunit PdxS; Region: PRK04180" /db_xref="CDD:179769" misc_feature order(2181401..2181403,2181458..2181460,2181572..2181574, 2181788..2181796,2181971..2181973,2182028..2182030) /locus_tag="lmo2101" /note="active site" /db_xref="CDD:240078" misc_feature order(2181503..2181505,2181509..2181511,2181533..2181535, 2181578..2181580,2181587..2181595,2181602..2181604, 2181653..2181667,2181791..2181799,2181803..2181805, 2181812..2181817,2181824..2181826,2181977..2181979, 2181986..2181991,2182112..2182114) /locus_tag="lmo2101" /note="multimer interface [polypeptide binding]; other site" /db_xref="CDD:240078" regulatory 2182205..2182210 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2101" gene 2182218..2182784 /locus_tag="lmo2102" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984751" CDS 2182218..2182784 /locus_tag="lmo2102" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2102; with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate" /codon_start=1 /transl_table=11 /product="glutamine amidotransferase subunit PdxT" /protein_id="NP_465626.1" /db_xref="GeneID:984751" /translation="MKKIGVLAIQGAVDEHIQMIESAGALAFKVKHSNDLAGLDGLVL PGGESTTMRKIMKRYDLMEPVKAFASKGKAIFGTCAGLVLLSKEIEGGEESLGLIEAT AIRNGFGRQKESFEAELNVEAFGEPAFEAIFIRAPYLIEPSNEVAVLATVENRIVAAK QANILVTAFHPELTNDNRWMNYFLEKMV" misc_feature 2182218..2182781 /locus_tag="lmo2102" /note="pyridoxal 5'-phosphate synthase glutaminase subunit PdxT; Region: PRK13525" /db_xref="CDD:237411" misc_feature order(2182353..2182361,2182452..2182454,2182530..2182532, 2182617..2182622,2182725..2182727,2182731..2182733) /locus_tag="lmo2102" /note="predicted active site [active]" /db_xref="CDD:153220" misc_feature order(2182452..2182454,2182725..2182727,2182731..2182733) /locus_tag="lmo2102" /note="catalytic triad [active]" /db_xref="CDD:153220" regulatory complement(2182790..2182813) /regulatory_class="terminator" gene complement(2182823..2183800) /gene="eutD" /locus_tag="lmo2103" /db_xref="GeneID:987908" CDS complement(2182823..2183800) /gene="eutD" /locus_tag="lmo2103" /experiment="EXISTENCE:[PMID:19448609]" /note="in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta" /codon_start=1 /transl_table=11 /product="phosphotransacetylase" /protein_id="NP_465627.1" /db_xref="GeneID:987908" /translation="MSDLFTTIKGQVTGKNVRIVLPEGTDERIVGAAARLQKENIVKP ILLGNKAEIEAKAKEIGVSVEGIAIHEPATDPLFDELVAAFVERRKGKATEEAARKML VDPNYFGTMLVYTGKAEGLVSGAAHSTGDTVRPALQIIKTKPGVSKVAGAMIMVRGEE RYLFSDVAINIAPVAADLAENAIVSAETAEIFGIDPRVAMLSFSTKGSAKSDETEKVV EATALAKEKAPELTLDGEFQFDAAFVPTVAEKKAPGSVIKGDANVFIFPSLEAGNIGY KIAQRLGNFEAVGPILQGLNAPVNDLSRGCNTDDVYNLTLITAAQAVNK" misc_feature complement(2182826..2183797) /gene="eutD" /locus_tag="lmo2103" /note="phosphotransacetylase; Region: eutD; PRK09653" /db_xref="CDD:236609" regulatory complement(2183811..2183816) /regulatory_class="ribosome_binding_site" regulatory 2184103..2184108 /regulatory_class="ribosome_binding_site" gene 2184120..2184347 /locus_tag="lmo2104" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984430" CDS 2184120..2184347 /locus_tag="lmo2104" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2104" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465628.1" /db_xref="GeneID:984430" /translation="MQLNETAVGEKVRISELKIENAMLKRRLLALGCDEGCDICIKQK GLFGGPCTFETKGQYISIRQCDACAIMVERR" misc_feature 2184120..2184341 /locus_tag="lmo2104" /note="FeoA domain; Region: FeoA; pfam04023" /db_xref="CDD:461133" regulatory 2184330..2184336 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2104" gene 2184344..2186338 /locus_tag="lmo2105" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987907" CDS 2184344..2186338 /locus_tag="lmo2105" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ferrous iron transport protein B" /protein_id="NP_465629.1" /db_xref="GeneID:987907" /translation="MSQNTYCLLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGT LRSKTGKLIDLPGIYDLNPISRDETVVTRFLLEEKFDCMLNIVDSSQIERNLNLTIQL LEFGAPVVMGLNMIDVAAGRGIHLNIQNLAKKLRIPILPVVARSGKGTDDILTTLSEK HVAPAIPLVLPYGEPAEKAIAEIQALTKDIIPTKQSRWLAVQFLSKNEVTEEFLTTSP MFEQLKDIRSDLEIALAGKLENHFHQVRVNYIHDICLTSVEYTRNSDIPLSDKLDKIF THKFFGIPIFLGIMWLIFQITFTWVGAPLSDLLDGFIGGSLTDWVTSFLTTIGASGFI TDLVADGIIAGVGGVLVFVPQILVIFFFISVLEDSGYMARIAVVMDRVMEIFGLNGKA FIPMIIGFGCNVPGIMAARSIEESKERTLTILVSPFMSCSARLPVYALFVGVFFEKYQ ALVVLSLYVIGILMALIVTKILSKTLLKKDNSVFVVELPPYRLPSLKTLWRSTWEKGK GFLRKAGTFIFAGSVIIWLLNYAGPSGLDVPMGESFLAIIGGMLAPLLVPLGFGTWQA GATLIPGFLAKEVVVSTMAIIYAVGESSMGSIVSTFYTPLSAYCFMLFILLYIPCLAT VAAIRKETSSWKWTAFAVAYPLITAYVLVFLVYQIGSLFV" misc_feature 2184344..2186335 /locus_tag="lmo2105" /note="Fe2+ transporter FeoB [Inorganic ion transport and metabolism]; Region: FeoB; COG0370" /db_xref="CDD:440139" gene 2186345..2186527 /locus_tag="lmo2104a" /db_xref="GeneID:16695801" CDS 2186345..2186527 /locus_tag="lmo2104a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475638.1" /db_xref="GeneID:16695801" /translation="MFFVSIIVNLLLGGAIFGYTIYAIIKFVKRSKQGKCGGCELEKA CNCESDEHTNLDHIYK" regulatory complement(2186535..2186552) /regulatory_class="terminator" gene complement(2186557..2187411) /locus_tag="lmo2106" /db_xref="GeneID:984749" CDS complement(2186557..2187411) /locus_tag="lmo2106" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465630.1" /db_xref="GeneID:984749" /translation="MSLKMKWIIAISIIIVLLVVGWFLGTRLTVKKYEVSSTKIEKEI KLVQLSDLHFSEFGDKNEKLLHKVENLNPDVIAITGDLFDRQGDSVPKELIKKLTKIA PVYFSPGNHEYDVKNAYEDDYKPFLEKMGVVNLEDKTATIDVGGQKFQMSGLRSSANL DYDYSYYKKGLAEIQTQQDSQYYQVLLSHMPDYFKLYVENDFDLTLSGHTHGGIVRIP YTNIGAIAPGPQRTILPEYVYGEHSKNGKTMIISAGLGAGSLHQKAFPRLGNPYEIVA VTIKPELK" misc_feature complement(2186566..2187366) /locus_tag="lmo2106" /note="Predicted phosphohydrolase, MPP superfamily [General function prediction only]; Region: YaeI; COG1408" /db_xref="CDD:441018" regulatory complement(2187419..2187424) /regulatory_class="ribosome_binding_site" regulatory 2187649..2187654 /regulatory_class="ribosome_binding_site" gene 2187663..2188424 /locus_tag="lmo2107" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984748" CDS 2187663..2188424 /locus_tag="lmo2107" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DeoR family transcriptional regulator" /protein_id="NP_465631.1" /db_xref="GeneID:984748" /translation="MNQKERIVEELKLLENMKTISQEELMQIFSISKDTARRDILKLV ESGLAERYPGGVSLPVLKPQIESYTSRLVKQSEQKQKIAYVAGKVIKDHMTIYLDVST TVHFLASGLEQNDLVVVTNSMDNAIAASQKEDNKVYLLGGFFNFQSRVLSGEPVLGQL QQFNFDVAFIGGAGLTEEGVFYSELTDVYMKQEIIRNSEKVYLLVDSTKVNKKTAFKI DFSGIDAVITDEPLPKDLMQHLISKEVEVISLKGL" misc_feature 2187663..2188406 /locus_tag="lmo2107" /note="DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family [Transcription, Carbohydrate transport and metabolism]; Region: GlpR; COG1349" /db_xref="CDD:440960" regulatory 2188415..2188420 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2107" gene 2188430..2189563 /locus_tag="lmo2108" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:988008" CDS 2188430..2189563 /locus_tag="lmo2108" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="N-acetylglucosamine-6-phosphate deacetylase" /protein_id="NP_465632.1" /db_xref="GeneID:988008" /translation="MAVIKNVKIYKENELIDAVVITEGNLIKEVCSTTPEKYSDEPTF DGNGRLLIPGMIDVHIHGAKNYDMMDGSTESIQAVSMACAETGCTSFLVTSVSSSLED LIQMIRQTKKVIGKEKGAKIAGIHLEGPYLNIEKKGMQNPAHLRHPDLKEMKKIFDEA DGLIKMVTIAPELPGGIELIDFLKKRGVVVAIAHSNATYEEAQDAFEKGASHITHCFN AMPAIHHRAPGLVAAALENDSISVQAIVDGVHLHPGIVRLIHKIKGPDKMVLTTDALQ AMGVGDGEYIFGGHQVTVTEGVARLQDGTLASSTVTMNKSLRLSNEFGINLQDTIQMA TSTPADILGMKNLGRIEKGYSADLVLLDKKFEVLSTWINGEKY" misc_feature 2188436..2189554 /locus_tag="lmo2108" /note="N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]; Region: NagA; COG1820" /db_xref="CDD:441425" regulatory 2189587..2189592 /regulatory_class="ribosome_binding_site" gene 2189605..2190402 /locus_tag="lmo2109" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984746" CDS 2189605..2190402 /locus_tag="lmo2109" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hydrolase" /protein_id="NP_465633.1" /db_xref="GeneID:984746" /translation="MPLFKHEGIDFNYEIQGEGIPFLFLHGLGDNLKFAFETFNNDEK IQLISLDQRGHGKSGHDSRKLSYERLASDALALMDYLGIQRFYIGGLSMGAGVAVNLA VHAENKVMGLILLRSSATDEPMKKEVIEWFSTVSMYLPKKNGSQLFEQDPIFPSIKDT YPKAIDTFKRYFEDDASVNYYKKFIDIPRDRPIKCKSELTNLTIPTLILANNYDVIHP IEYSLFYARNMKKASYYELTPKTVDAEKHKIEIDTYINTFILSNSKK" misc_feature 2189626..2190315 /locus_tag="lmo2109" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" gene complement(2190489..2191445) /locus_tag="lmo2110" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987919" CDS complement(2190489..2191445) /locus_tag="lmo2110" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="mannnose-6 phospate isomerase" /protein_id="NP_465634.1" /db_xref="GeneID:987919" /translation="MTEALFLNPVFQDRIWGGTKLHDYFGYDIPSNTTGEDWAISAHP NGPSVIKNGEYKGKTLAELWQENPALFGNPKEAVFPLLTKILDANTDLSVQVHPNDEY AKVHENGELGKTECWYIIDCAPGAELIYGHKAASREEFATWAKNGEWDKLLRKVAIKP GEFYYVPSGTIHALGTGTLVLETQQSSDTTYRVYDYDRKDAEGNLRELHLDKAIDVTT APHVDAKLDIHTETRGGLTETTFVSNDFFSVYKWDVDGKAEFVAKAPYTLVSILDGEA VLTIDGDEQAIKKGDHFVLPNEVKSWEITGQITAIVSTPPVK" misc_feature complement(2190498..2191445) /locus_tag="lmo2110" /note="Mannose-6-phosphate isomerase, class I [Carbohydrate transport and metabolism]; Region: ManA; COG1482" /db_xref="CDD:441091" regulatory complement(2191456..2191461) /regulatory_class="ribosome_binding_site" gene complement(2191525..2192256) /locus_tag="lmo2111" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984745" CDS complement(2191525..2192256) /locus_tag="lmo2111" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="nitroreductase" /protein_id="NP_465635.1" /db_xref="GeneID:984745" /translation="MNDVLTLLRNHRSFRKYKKGVEIPEEKLDAIIRAAQAAPSWING QHYSIIAIKDQERKNKMAELCGNQPYIAECSVFLCFVADFHRVKVASDMHGKSFQIAG EEDLLMVAATDIGLCMQNALTAAESLDYGTICIGGLRRNITATAGFLNLPEFVMPVVG LCIGVPDVEAPVKPRLPKEAVYFEETYQTDVMPLLEAYDQEIIPFSEREGFVSYTERL AKFYDRPYYPNLTEQIKERGFLGGK" misc_feature complement(2191627..2192247) /locus_tag="lmo2111" /note="nitroreductase similar to Escherichia coli NfsA; Region: NfsA-like; cd02146" /db_xref="CDD:380322" misc_feature complement(order(2191663..2191665,2191708..2191719, 2191723..2191725,2191729..2191740,2191780..2191782, 2191801..2191803,2191807..2191812,2191840..2191842, 2191855..2191857,2191873..2191878,2191888..2191890, 2191897..2191902,2191909..2191914,2191921..2191926, 2191930..2191938,2192008..2192010,2192086..2192088, 2192095..2192118,2192122..2192133,2192140..2192151, 2192155..2192163,2192167..2192169,2192224..2192226, 2192230..2192238,2192242..2192247)) /locus_tag="lmo2111" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:380322" misc_feature complement(order(2191732..2191734,2191738..2191740, 2191846..2191860,2191909..2191911,2191918..2191923, 2192047..2192049,2192053..2192055,2192128..2192130, 2192134..2192142,2192212..2192214,2192218..2192226)) /locus_tag="lmo2111" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:380322" misc_feature complement(order(2191630..2191632,2191639..2191644, 2191738..2191740,2191744..2191746,2191837..2191842, 2192128..2192130,2192212..2192214)) /locus_tag="lmo2111" /note="NADP binding site [chemical binding]; other site" /db_xref="CDD:380322" regulatory complement(2192264..2192269) /regulatory_class="ribosome_binding_site" regulatory 2192364..2192369 /regulatory_class="ribosome_binding_site" gene 2192379..2192609 /locus_tag="lmo2112" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985597" CDS 2192379..2192609 /locus_tag="lmo2112" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2112" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465636.1" /db_xref="GeneID:985597" /translation="MRQQQIDFKWLEENFLTANEAATYLGISKQALLSLAKRDVLPFT KKGNMVLFHRMDIELRLEKQQSLREKYRPFET" misc_feature 2192421..2192570 /locus_tag="lmo2112" /note="Helix-turn-helix domain; Region: HTH_17; pfam12728" /db_xref="CDD:463684" regulatory 2192679..2192684 /regulatory_class="ribosome_binding_site" gene 2192693..2193448 /locus_tag="lmo2113" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984744" CDS 2192693..2193448 /locus_tag="lmo2113" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="heme peroxidase" /protein_id="NP_465637.1" /db_xref="GeneID:984744" /translation="MNEAVKTLDGWFCLHDFRSIDWAAWRELNPGNQELMLNELSHFL SDMEITKNIGEGEHTIYSILGQKADLVFFTLRDSLEALNEVENRFNKLAIADYLLPTY SYISVVELSNYLASHMAGGDDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWY MLPMEERQQLIRDHGLIGRSYAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTE MRFDEASARYAEFGSFFIGNLLLSEQLSKLFTI" misc_feature 2192693..2193445 /locus_tag="lmo2113" /note="putative heme peroxidase; Provisional; Region: PRK12276" /db_xref="CDD:237033" regulatory 2193461..2193507 /regulatory_class="terminator" regulatory 2193632..2193637 /regulatory_class="ribosome_binding_site" gene 2193645..2194412 /locus_tag="lmo2114" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987889" CDS 2193645..2194412 /locus_tag="lmo2114" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465638.1" /db_xref="GeneID:987889" /translation="METVLQAKNVRKIYGSKGNVYTALENISIDIKEGEFTGIMGPSG AGKSTLLNVLSTIDKPTSGQIVISGQELENMNEQQMSTFRRDKLGFIFQDYNLLDTLT IRENIILPLALAKRPVKEMEEKLAIISEKFGITEILDKYPSEISGGQKQRTAASRAII TSPSLIFADEPTGALDSKSATNLLESLRDLNEQDKSTIMMVTHDAFAASFCKRILFIK DGELYTEIYRGTKTRKEFFQKILDVLAKLGGDSDDVI" misc_feature 2193645..2194322 /locus_tag="lmo2114" /note="ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]; Region: LolD; COG1136" /db_xref="CDD:440751" regulatory 2194385..2194389 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2114" gene 2194399..2196339 /locus_tag="lmo2115" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987993" CDS 2194399..2196339 /locus_tag="lmo2115" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_465639.1" /db_xref="GeneID:987993" /translation="MTLFDLAKKNIRHNFVHYFLYFASMIFSIMIYFTFLVLSKDPSV VARIDQSAKLSTAFSSSSVILLIFVAIFILYSNNFFTRKRKKEIGLYSLLGLRKKEIG RMLFYENFIMGLGALIIGIIAGTLLSKLFVTILLNLINLDSIGGFAFSWAAVIQTSIV FIIITLFTSFTGYRIIYRTTLLDLFHSESKREKSPKPSFILALLSILLIGLGYFIAGQ PLDSKGSIWAQLGFSIGALVILASVIIGTALFITFFLPYLLTKLRNNKRIFYKGSNII STSQLAFRISSNAKTLIIISILSATTLSAIGTISSVYYQANTSASTSAPSSFEYEIPK DSETNNKIIETAESDPDHPVEFKQKSTYYIVKAEGARPDFVEYDINEGFPVISESDYN SLVKEQGTPEKAASLKGNEAQMVLTITYDEDAQKEMVGEKFTLASPNKPNIKIKSVVQ NSPISTIPGLLVLPDSQVAKIAADSSIAAHSVESISVKDAKQAQALDKKMRAVIPKDT NFISYTKMYQEIITVTGVLLFIGMFIGFVFLAATGSIIYFKQLTEAYNDIGTFDILKK IGLTRRDIRKVLAKQLLVVFLIPLIIGIAHSSFALLGLSHMLALDLTLPVVISTGVYT LMYIVYYFVTLNSYTNIVFGKK" misc_feature <2194534..2194962 /locus_tag="lmo2115" /note="ABC-type transport system involved in lipoprotein release, permease component LolC [Cell wall/membrane/envelope biogenesis]; Region: LolE; COG4591" /db_xref="CDD:443648" misc_feature 2195683..2196300 /locus_tag="lmo2115" /note="ABC-type transport system involved in lipoprotein release, permease component LolC [Cell wall/membrane/envelope biogenesis]; Region: LolE; COG4591" /db_xref="CDD:443648" regulatory 2196349..2196372 /regulatory_class="terminator" regulatory complement(2196349..2196372) /regulatory_class="terminator" gene complement(2196382..2197206) /locus_tag="lmo2116" /db_xref="GeneID:984743" CDS complement(2196382..2197206) /locus_tag="lmo2116" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2116" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465640.1" /db_xref="GeneID:984743" /translation="MPSKWRGICGSLLIALGITQLYSFISAVIGYFNAEENSFVFVWN YWMLLFFGVGLFIIGFAFMRKESFRLASIIGVMCFVLFQGFSVYYYQLRVLSKLEYTQ PFEWSGTLLCILGLLVLIALLIGPIFQAKEIQADQAWKTKWRYAAGVFSLLGAVTSVF AAVTIFRQLHSDNIKEGYLFTTALDGYFACFMAVIFLLVVIFSWRKVSYLLVGILMGA AFILLTNYLSVTNWIDFAKENLSITFGSNEREVFGMQFLMGASAFLSSIFGYIAKK" regulatory complement(2197215..2197220) /regulatory_class="ribosome_binding_site" regulatory 2197253..2197258 /regulatory_class="ribosome_binding_site" gene 2197267..2197728 /locus_tag="lmo2117" /db_xref="GeneID:984741" CDS 2197267..2197728 /locus_tag="lmo2117" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465641.1" /db_xref="GeneID:984741" /translation="MNWTIWDKSQKVPYTLLLEADPSEKQIAKYLDKSHVFQLMHDDI VIGIICLFPLNNDQLEIMNIAVSSDYRNQGIGKKLLEKAFDYAIHKHFIKIIVKTGNS SIDQLAFYQKNGFRMQHIIPNYFTENYPNQTITENGIVCLDQIILLKEIKS" misc_feature 2197339..2197638 /locus_tag="lmo2117" /note="N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2) [Transcription, General function prediction only]; Region: PhnO; COG0454" /db_xref="CDD:440222" regulatory 2197723..2197746 /regulatory_class="terminator" regulatory complement(2197723..2197746) /regulatory_class="terminator" gene complement(2197763..2199115) /gene="glmM" /locus_tag="lmo2118" /db_xref="GeneID:984740" CDS complement(2197763..2199115) /gene="glmM" /locus_tag="lmo2118" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate" /codon_start=1 /transl_table=11 /product="phosphoglucosamine mutase" /protein_id="NP_465642.1" /db_xref="GeneID:984740" /translation="MGKYFGTDGVRGVANSELTPELAFRLGRMGGYVLTRHVGEHPRV LVARDTRISGEMLESALIAGLVSVGIEVMRLGVISTPGVAYLTKAQGASASVMISASH NPVDDNGIKFFGSDGFKLSDDQEEEIEQLLDTAEDTLPRPSGEGLGTVSDYFEGKQKY IQYLKQTIENDFNGYHIALDCANGATSGLATHLFADLDADISSMGASPNGLNINDGVG STHPEALAAFVLDKKADVGLAFDGDGDRVIAIDEIGQIVDGDKIMFICAKYLREQGLL NNNTIVSTVMSNLGFYKGLKELEIEDVQTAVGDRYVVEAMREGNYNLGGEQSGHIIFL DHNTTGDGLLSGIQLINVMKATGKKLSELAAEMKTFPQKLENIRVSDKNHVTDNPKVS KVIDEVEAEMAGNGRVLVRPSGTEPLVRVMVEAATKEETDEYCERISAVVRSEMALND " misc_feature complement(2197799..2199106) /gene="glmM" /locus_tag="lmo2118" /note="GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily. It is required for the interconversion of glucosamine-6-phosphate and glucosamine-1-phosphate in the biosynthetic pathway of...; Region: GlmM; cd05802" /db_xref="CDD:100095" misc_feature complement(order(2197856..2197858,2197871..2197879, 2197883..2197885,2198126..2198128,2198132..2198134, 2198138..2198140,2198189..2198197,2198258..2198260, 2198378..2198383,2198387..2198389,2198393..2198395, 2198783..2198785,2198807..2198815,2199083..2199085, 2199092..2199094,2199098..2199100)) /gene="glmM" /locus_tag="lmo2118" /note="active site" /db_xref="CDD:100095" misc_feature complement(order(2197856..2197858,2197871..2197879, 2197883..2197885,2198126..2198128,2198132..2198134, 2198138..2198140,2198189..2198191,2198195..2198197, 2198258..2198260,2198378..2198380,2198813..2198815, 2199092..2199094)) /gene="glmM" /locus_tag="lmo2118" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100095" misc_feature complement(order(2198381..2198383,2198387..2198389, 2198393..2198395,2198813..2198815)) /gene="glmM" /locus_tag="lmo2118" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:100095" regulatory complement(2199124..2199129) /regulatory_class="ribosome_binding_site" regulatory complement(2199331..2199360) /regulatory_class="terminator" gene complement(2199365..2200723) /locus_tag="lmo2119" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985280" CDS complement(2199365..2200723) /locus_tag="lmo2119" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465643.1" /db_xref="GeneID:985280" /translation="MDRILNNKWSIRIIALLLAAILFTSVNANNNNATTFSTTSSSDS EVIENVPVKVYYDKTNLYISGIPETVTVTLSGPRSIVQSAKAQQDFTVYADLKNASIG TQEVKLQVKDVSDRLKVKVNPATVNVNVQEKVTKKFSVDVELSKSVVADGYQAGTPII DPKKVSITGAKDTIEQIAYVKATLESDGKHKSEFTDKATVSVFDSNLNKLDVEVNPQE VEVTVPVEKVGKSVPVKIKQEGTPESDIEISSMTPDKSEVVVVGDDAVLEKIKEIEIP IDVSKIKADTVKEVTVPVPTGAKSVQPTTIEVKIKTVKKSEANNNPTTSDSNNQDTDT TDNNTDDSGDNNTKISKSFSNMQVYMSGLKNTFDAQMITPANGKVSVTITGEKKTVDG IAAKDLSVIANLSKSKAGSYSIPLELNGLPDNVAYVINPRQADFIITDKEASIEVPSK ST" misc_feature complement(2199449..2200591) /locus_tag="lmo2119" /note="Cyclic di-AMP synthase regulator CdaR, YbbR domain [Signal transduction mechanisms]; Region: YbbR; COG4856" /db_xref="CDD:443884" gene complement(2200723..2201544) /locus_tag="lmo2120" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984739" CDS complement(2200723..2201544) /locus_tag="lmo2120" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465644.1" /db_xref="GeneID:984739" /translation="MDFSNMSILHYLANIVDILVVWFVIYKVIMLIRGTKAVQLLKGI FIIIAVKLLSGFFGLQTVEWITDQMLTWGFLAIIIIFQPELRRALETLGRGNIFTRYG SRIEREQHHLIESIEKSTQYMAKRRIGALISVARDTGMDDYIETGIPLNAKISSQLLI NIFIPNTPLHDGAVIIKGNEIASAASYLPLSDSPFLSKELGTRHRAALGISEVTDSIT IVVSEETGGISLTKGGELFRDVSEEELHKILLKELVTVTAKKPSIFSKWKGGKSE" misc_feature complement(2200759..2201502) /locus_tag="lmo2120" /note="c-di-AMP synthetase, contains DisA_N domain [Signal transduction mechanisms]; Region: DisA; COG1624" /db_xref="CDD:441231" regulatory complement(2200736..2200741) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2120" regulatory complement(2201552..2201557) /regulatory_class="ribosome_binding_site" regulatory complement(2201674..2201707) /regulatory_class="terminator" gene complement(2201719..2203980) /locus_tag="lmo2121" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987891" CDS complement(2201719..2203980) /locus_tag="lmo2121" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="maltose phosphorylase" /protein_id="NP_465645.1" /db_xref="GeneID:987891" /translation="MAQKQLFEIEPWTLRTTKLDKENKRLQESLTSLGNGYMGMRGNF EEGYSGDGHIGTYYAGVWFPDKTRVGWWKNGYPDYFGKVINGLNFIGIEVRLDGEKLD LFVDEVSDFELELDMEKGVLRRQFTVVKNNKTFRISAERFLSVATKELAVIHYQVEAL SSAKVELTSFLDGNVQNEDANYEEMFWQEVEKASSASRGSLVTKTIPNNFGTPRFTVS AVMENKTNAANETNQTKALYTENHFQFDLQENEVAKIEKRVVITTSRDFEEEDILPAG EKILQSLEIKTYEELLTAHVAGWRERWDKADVEVSGDDSAQQGIRFNIFQLFATYYGE DARLNIGPKGFTGEKYGGATYWDTEAFALPMYLSLTDKSVSHNLLKYRHDQLDGAKIN AQKIGLDGALYPMVTFTGVECHNEWEITFEEIHRNGAIAYAIYNYTNYTGDDSYLKTD GIEVLTEITRFWADRVHLSDRLDKYMIHGVTGPNEYDNNVSNNWYTNYIAAWTIRYTL ENLDAEAKKRLGVTEYEIAKWEDIEHRMYYPFDEKWQIFVQHDTFLDKELRSTDTLKP EDMPINQNWSWDKILRSCFIKQADVLQGLYLFYDDFDFDTKQRNFEFYEPLTVHESSL SPAVHAVLASELGKYDKAVELYKRTARLDLDNINNDTEDGLHITSMAGSWLSIVQGFA GMRVTSGKLSFAPFLPNGWDNYRFKINFRDRLLEVKVEVGQVTVKLCHGEAINLEMYK KNYLLETAVIVEI" misc_feature complement(2201722..2203974) /locus_tag="lmo2121" /note="maltose phosphorylase; Provisional; Region: PRK13807" /db_xref="CDD:237517" regulatory complement(2203988..2203993) /regulatory_class="ribosome_binding_site" gene complement(2203996..2204829) /locus_tag="lmo2122" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984733" CDS complement(2203996..2204829) /locus_tag="lmo2122" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="maltodextrose utilization protein MalA" /protein_id="NP_465646.1" /db_xref="GeneID:984733" /translation="MKKIPFIIQYVKSTLGPTAIFEGRKVLKFWQMVIVFIFLNALLL LPVSAHFANQSSFDLPSLMPKMATLGTDQLASKISGLTLENGALTDKNAHIVEKTVNG VAGVNLTKAELSGAKNVINFKDQEMTLTDASGYNFEVSYPKDATLSEITSGESLVDWV SAQWYLENQAFVFLSMVLMIGSIIFVSSLMLTVFTTLFIWMTKRSSFSSIASFKESVN LTLNALGIPVIAACIIGFIYFDITIIMAVQSLGMVLMIAWTFLKTRFYKTSEKSMAAS R" misc_feature complement(2203999..2204829) /locus_tag="lmo2122" /note="Maltodextrin utilization protein YvdJ (function unknown) [Carbohydrate transport and metabolism]; Region: YvdJ; COG5521" /db_xref="CDD:444272" regulatory complement(2204838..2204843) /regulatory_class="ribosome_binding_site" gene complement(2204857..2205708) /locus_tag="lmo2123" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984732" CDS complement(2204857..2205708) /locus_tag="lmo2123" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_465647.1" /db_xref="GeneID:984732" /translation="MRDFMKDQRTTKFLTQFFTYLFLTVLTIIILYPILITASSAFKP GNIAAFTLEWSDSWTLNNFTRLFNETLYLDWYKNTLIIAVVTMIMQVTIVTLAGYTYS RYRFKGRKNSLIFFLIIQMVPTMAALTAFYVLAMLLGALDQYWFLTLIYIGGGIPMNT WLMKGYFDTVPRDLDESAKLDGAGHFRIFAQIILPLVRPMIAVQALWAFMGPFGDFLL AKFLLRTPENLTIAVGLQTFIANPQQQKVALFAAGAILAALPICLLFFFLQKNFVSGL TAGGTKG" misc_feature complement(2204860..2205699) /locus_tag="lmo2123" /note="ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism]; Region: MalG; COG3833" /db_xref="CDD:443045" gene complement(2205709..2207016) /locus_tag="lmo2124" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987890" CDS complement(2205709..2207016) /locus_tag="lmo2124" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_465648.1" /db_xref="GeneID:987890" /translation="MKLEQKQIKNVRQATLLSIIPGLGQFYNKQNFKGIVFFALFALF IIEFFAVGLNALIGLVTLGSVPGVDHSLFLMIEGTLQLIVTLLFIGFWFINIFDARRV AMQWNLGETVNRSALAIIKNMLDKGFPYLLTLPAYLVMTFVIIFPVLVTLFMAFTNYD FYHIPPANLIDWVGFKNFFNIFFLSSYRDTFLSVFSWTLIWTICATSLQIVVGVFTAI VANQSFIKGKRLFGVVFLLPWAVPAFITIMSFSNMFNDSIGAINSQVIPLLNHLPFID INAIAWKTDPFWTKVALISIQGWLGFPYIYVMVTGVLQAIPGELYEAARIDGASAIQR FRKITLPMILFVTAPVFITQYTFNFNNFSIIYLFNEGGPGSVGAGAGSTDILISWIYK LTTGTSPQYAVAAAVTLLISIIVITVSMIAFKKTNAFGNEEMM" misc_feature complement(<2206879..2206983) /locus_tag="lmo2124" /note="Family of unknown function (DUF5683); Region: DUF5683; pfam18935" /db_xref="CDD:465918" misc_feature complement(2205745..2206686) /locus_tag="lmo2124" /note="ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpA; COG1175" /db_xref="CDD:440788" regulatory complement(2205717..2205722) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2124" regulatory complement(2207025..2207030) /regulatory_class="ribosome_binding_site" regulatory complement(2207066..2207094) /regulatory_class="terminator" gene complement(2207103..2208362) /locus_tag="lmo2125" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987894" CDS complement(2207103..2208362) /locus_tag="lmo2125" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter substrate-binding protein" /protein_id="NP_465649.1" /db_xref="GeneID:987894" /translation="MKRFKKVGIVSAVLVMALSLAACGGGKDTSKSGSSDEKTLTVSV DAGYKDYVNKIKGDFEKDNDVKVKVVEKDMFETLEALPLDGPAGTAPDVMMSAFDRIG SLGQQGHLAEVKLGNKDDYDEKDQKQVTIDDKIYGAPAIIETLVLYYNKDLLDKAPAT FKDLETLSKDSRFAFTSEKGKNTGFLAKWTDFYFSYGLLAGYGGYVFGDEGTNPKDIG LNNKGSVEGITYATKWFQDVWPKGMQDNKSADDFIQDQFVKGKAAAILGGPWSAANYK EAKINYGVAKIPTLNNGKEYSPFAGGKGWVVSNYSKNKDVAQKWLDYVTNQKNQETLY DMTNEVPANLKARDTAKSKNDELTNAVIEQYKNAQPMPNIPEMSEVWTGAENLMFDAA SGSKTPQQSADDAVKVIEDNVTQKYTK" misc_feature complement(<2208150..2208350) /locus_tag="lmo2125" /note="ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]; Region: NlpA; COG1464" /db_xref="CDD:441073" misc_feature complement(2207124..2208245) /locus_tag="lmo2125" /note="Type 2 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_Type_2; cl21456" /db_xref="CDD:473866" regulatory complement(2208371..2208376) /regulatory_class="ribosome_binding_site" gene complement(2208576..2210351) /locus_tag="lmo2126" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984730" CDS complement(2208576..2210351) /locus_tag="lmo2126" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="maltogenic amylase" /protein_id="NP_465650.1" /db_xref="GeneID:984730" /translation="MEKAGIYHQPASSYAYSYDAKTLHIRIRTKRLDISKVTLIAADP YLWKDGKWQSESYTMRKIAETEEHDYWFFAITPEHRRLQYGFLLTDTEGETTFYGGRG FFEPTEANLATMDYYFKFPFIHAVDTFEAPEWVRNTIWYQIFPERFANGNPAISPENT LPWGSKDPNTTDFFGGDIEGIIEHLDYLAELGINGVYLTPVFEAPTNHKYDTIDYKKI DPHFGDKETFRKLVKEAHKRGIRIMLDAVFNHIGDTSPEWQDVVEKEEKSAYRDWFHI HSFPVRQNENGNIEGEPTLSYDTFAFTTHMPKLNTANPEVQKYLLDIATYWIREFDID GWRLDVANEVDHAFWKEFKKAAQAEKEDIYILGEIWHDSWIWLLGDEFHAVMNYPFTQ TIIENFIEEKITPEQMVSGINEQYMRYPNQVNEVMFNMLDSHDTARILTRANNDEDKV KQALAFMFAHTGSPCIYYGTEIGMDGGNDPGCRKCMEWDEAKQNQDMLAFTKQLIALR KDNQAIITSGELTWLEASSETGITAFSKELNGEKLHFLFNQTKKDQDFTISFANTAID IWNNQAVSDNLTIPAKGFLVIKENS" misc_feature complement(2209980..2210351) /locus_tag="lmo2126" /note="Alpha amylase, N-terminal ig-like domain; Region: Alpha-amylase_N; pfam02903" /db_xref="CDD:397170" misc_feature complement(2208798..2209943) /locus_tag="lmo2126" /note="Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins; Region: AmyAc_CMD; cd11338" /db_xref="CDD:200477" misc_feature complement(order(2208903..2208905,2208915..2208917, 2209047..2209052,2209242..2209244,2209248..2209250, 2209332..2209337,2209434..2209436,2209602..2209604, 2209722..2209724,2209728..2209730)) /locus_tag="lmo2126" /note="active site" /db_xref="CDD:200477" misc_feature complement(order(2209098..2209100,2209176..2209178, 2209239..2209244,2209302..2209304,2209311..2209328, 2209428..2209430)) /locus_tag="lmo2126" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:200477" misc_feature complement(order(2209047..2209049,2209248..2209250, 2209335..2209337)) /locus_tag="lmo2126" /note="catalytic site [active]" /db_xref="CDD:200477" regulatory complement(2210359..2210364) /regulatory_class="ribosome_binding_site" regulatory 2210598..2210603 /regulatory_class="ribosome_binding_site" gene 2210609..2211244 /locus_tag="lmo2127" /db_xref="GeneID:984729" CDS 2210609..2211244 /locus_tag="lmo2127" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2127" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465651.1" /db_xref="GeneID:984729" /translation="MENTLSFKKQGYWLFSSAIIIGVLFLLLPHIISNIGVLEFIGAF FNALCMGVIAFIILKAEFLDWFKHFSFKWIIIGAPALIIISSIFNIAWAYFAGSTTEN GINSVLTWTYVFTSIPFMLLGEELLSISLLYAAWKKWNWKFWQASLLCSLLFATWHLT SYDFNFLQCIITLAPARLILNYLFKKTNSVWVTFIVHFIFDFIAFLPILLK" misc_feature 2210972..2211217 /locus_tag="lmo2127" /note="Type II CAAX prenyl endopeptidase Rce1-like; Region: Rce1-like; pfam02517" /db_xref="CDD:460578" regulatory 2211250..2211273 /regulatory_class="terminator" regulatory complement(2211250..2211273) /regulatory_class="terminator" gene complement(2211280..2212245) /locus_tag="lmo2128" /db_xref="GeneID:987887" CDS complement(2211280..2212245) /locus_tag="lmo2128" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="NP_465652.1" /db_xref="GeneID:987887" /translation="MATLADVAKRANVSKMTVSRVINHPDQVSDELKMLVYSAMEALE YVPNYAARALVQNRTQVIKFLILEEIDTVEPYYMNLLTGISRELDKYYYSLQLVTQRS RNIGAYDGLIVTGIRDKDYDLGLLDIDKPVIFYGENKRGYDSIDVDNKKGTALATEHM VEIGFSRIVFLGINLLDEQFMKSRLEGYEEVVKEHGLEPESYFIANSSSIAEEKAFEL LRYNSEKIAIVCASDRIAIGVVRAAAAFGRRFGENIAVTGFDGVFLDRISSPKITTVR SPVVEMGEELAKMLLAKINDHGKPQGNLLFTPELLIRASTTGKEE" misc_feature complement(2211298..2212245) /locus_tag="lmo2128" /note="DNA-binding transcriptional regulator, LacI/PurR family [Transcription]; Region: PurR; COG1609" /db_xref="CDD:441217" regulatory complement(2212252..2212257) /regulatory_class="ribosome_binding_site" gene complement(2212384..2212620) /locus_tag="lmo2129" /db_xref="GeneID:984728" CDS complement(2212384..2212620) /locus_tag="lmo2129" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2129" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465653.1" /db_xref="GeneID:984728" /translation="MQEQDIRYYVLPTIIIFILGIAAMNASSFPFISFLTTTLVAIAI GITIGGAHQLIRLVIKTYQQTKERRVSQKKWQTL" regulatory complement(2212629..2212634) /regulatory_class="ribosome_binding_site" gene complement(2213218..2215041) /locus_tag="lmo2130" /db_xref="GeneID:984779" CDS complement(2213218..2215041) /locus_tag="lmo2130" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465654.1" /db_xref="GeneID:984779" /translation="MASPLKRLLIGRPLKTSEAGDQKLGKLKALAVLSSDALSSIAYG TEQILLVLVTVSAAAMWYSLPIALCVLVLLFALNLSYKQIIYSYPHGGGAYIVSRENL GNNAGLIAGGSLLVDYMLTVAVSVSSGTDAIVSAVPSLYPFAVPIAVVLVIGVTIINL RGITESASLLAIPVYLFVFSIIALIFTGLFKVLTGMDASHETAAVGTHVQGVTIFLLL RAFASGSASLTGIEAISNAVPLFKEPRPKNAAKTLTLMAGLLGFFFVGITVLAFVYGT VPELKVTVLSQIAENVFGRNFMFYFIQATTALILVLAANTGFSAFPMLAFNLAKDKFM PRMYLARGDRLGYSNGIITLAVGSILLIILFKGKTELLIPLYSVGVFIPFTLSQTGMI VKWWKQRPKGWKKSLSANLLGASISFTVLLVLFLTRIESVWPVFVFMPIMIYVFHRTR HHYRKVGPQLRIDETMDLPDFKGNAVIICVSDTTKVVEGALQYAKSIGDTVIAVHISI DKKQEKEFVERWNRVHPEVRMANLFSPYRSISDPLMKFIDTAKQKADQDNYSLTVLIP QFIPRKGWQNVLHNQTSLLIRTRLLMKRDVVVSTYPYHLKE" misc_feature complement(2213689..2214960) /locus_tag="lmo2130" /note="Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; Region: PotE; COG0531" /db_xref="CDD:440297" regulatory complement(2215050..2215055) /regulatory_class="ribosome_binding_site" gene 2215375..2215446 /locus_tag="lmot41" /db_xref="GeneID:3167607" tRNA 2215375..2215446 /locus_tag="lmot41" /product="tRNA-Glu" /db_xref="GeneID:3167607" gene 2215604..2215677 /locus_tag="lmot42" /db_xref="GeneID:3167564" tRNA 2215604..2215677 /locus_tag="lmot42" /product="tRNA-Thr" /db_xref="GeneID:3167564" gene 2215687..2215770 /locus_tag="lmot43" /db_xref="GeneID:3167565" tRNA 2215687..2215770 /locus_tag="lmot43" /product="tRNA-Tyr" /db_xref="GeneID:3167565" gene 2215782..2215856 /locus_tag="lmot44" /db_xref="GeneID:3167606" tRNA 2215782..2215856 /locus_tag="lmot44" /product="tRNA-Gln" /db_xref="GeneID:3167606" gene 2215863..2215935 /locus_tag="lmot45" /db_xref="GeneID:3167582" tRNA 2215863..2215935 /locus_tag="lmot45" /product="tRNA-Lys" /db_xref="GeneID:3167582" regulatory complement(2216011..2216037) /regulatory_class="terminator" gene complement(2216054..2216743) /locus_tag="lmo2131" /db_xref="GeneID:984721" CDS complement(2216054..2216743) /locus_tag="lmo2131" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2131" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465655.1" /db_xref="GeneID:984721" /translation="MQSVFEDLYSKKILEEEFGYTCFLQTLIDNRIPYKKTRIPSNMI LLTEDTINTKVYFIEKGIVSLEKNKNVISFLGSNQIAGLNDYFMAEANLYTARVIETI TAYEFDKEDIICSIIGMQEGWLYLYLNNRNHENVLIEKCNLMRGNGENRLKESLEQLG RYFGNEKEGVLRIPKCFTKKIIANYSNLSVRSVTHLCRKLVEAGFLAENSKSFVLLDK YGKIEPEVTTI" misc_feature complement(2216093..2216632) /locus_tag="lmo2131" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" regulatory complement(2216751..2216759) /regulatory_class="ribosome_binding_site" regulatory 2217209..2217214 /regulatory_class="ribosome_binding_site" gene 2217222..2217953 /locus_tag="lmo2132" /db_xref="GeneID:985218" CDS 2217222..2217953 /locus_tag="lmo2132" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2132" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465656.1" /db_xref="GeneID:985218" /translation="MYLKETLDQFASIDNILKLLKKNPSFNKHCIQERLPQKTIITSN KQRKHIYIIEEGFMKLIFDDNKPRDFSYILSKGAFPFLPVYIEDIPEHTMMVALTDIV WWKIDIGFFKSMMEIEDPRNYLMLHQLAETRRRFYTIAYQEKLTSRESIYYSLSTLIE FGLRISEKVVELPEFLTYQILADHANTSKSYTSKVLGHLREDGILESQKKPWRINDVQ KLQKLIEMNVPLVKIQKKLRADLHS" misc_feature 2217297..2217893 /locus_tag="lmo2132" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" regulatory complement(2217930..2217953) /regulatory_class="terminator" gene complement(2217963..2218862) /locus_tag="lmo2133" /db_xref="GeneID:984718" CDS complement(2217963..2218862) /locus_tag="lmo2133" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="fructose-1,6-biphosphate aldolase type II" /protein_id="NP_465657.1" /db_xref="GeneID:984718" /translation="MLVNMKQLLEVAKENKFAVGAFNVADSNFLRVVVEEAEKNNAPA IIAVHPTELDFTKDDFFQYVLARIKNSPVPFVLHLDHGDNMGDVMRAVRCGFSSVMID GSLLPFEENIRVTKEVVDVCHKLGVSVEGELGTIGKTGNSIEGGVSEIIYTKPEEAEE YISRTGVDTLAVAIGTAHGIYPKDKEPKLRLDILKEIKALVNIPLVLHGGSANPDAEI AAAVEIGIQKVNISSDYKYAFYKKCREILSTTELWDANAIYPDCIDAAKEVVKYKMGL FESIGQVEKYQQAKTTAWRSELI" misc_feature complement(2218005..2218850) /locus_tag="lmo2133" /note="hypothetical protein; Provisional; Region: PRK08185" /db_xref="CDD:181275" misc_feature complement(order(2218122..2218124,2218131..2218133, 2218143..2218145,2218152..2218157,2218161..2218166, 2218443..2218445,2218662..2218667,2218674..2218676, 2218683..2218685,2218695..2218703,2218710..2218712, 2218770..2218772,2218779..2218787)) /locus_tag="lmo2133" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:238477" misc_feature complement(order(2218164..2218169,2218173..2218175, 2218230..2218232,2218236..2218241,2218320..2218322, 2218326..2218334,2218620..2218625)) /locus_tag="lmo2133" /note="active site" /db_xref="CDD:238477" misc_feature complement(order(2218239..2218241,2218329..2218331, 2218620..2218622)) /locus_tag="lmo2133" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:238477" misc_feature complement(order(2218230..2218232,2218236..2218238, 2218320..2218322,2218326..2218328,2218332..2218334)) /locus_tag="lmo2133" /note="Na+ binding site [ion binding]; other site" /db_xref="CDD:238477" regulatory complement(2218872..2218877) /regulatory_class="ribosome_binding_site" gene complement(2218879..2219733) /locus_tag="lmo2134" /db_xref="GeneID:986514" CDS complement(2218879..2219733) /locus_tag="lmo2134" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="fructose-1,6-biphosphate aldolase type II" /protein_id="NP_465658.1" /db_xref="GeneID:986514" /translation="MYVSMKGMLERANKEHYAVMAINCFNLETARAVIDAAQELRAPI IIDLLQDHLTSHLGSRFLTKPIIKMAEEASVEVAINLDHGHDVAIVKQCLADGFSSVM MDASSFPYEENVAITKKMVEFAEVYHASVEAEVGNIGAVTGDNYTNQEMYTDPKVAID FAKRTGIDALAISYGSSHGDYPEGFTPAFQFDIVREIKSATNMPLVLHGGSGCGAENI RESVRLGINKINVGSDFMKAQVNQIKTNLKESPAVNYVDLIHETIKAGTKAVKYYIHL SGSTGKSL" misc_feature complement(2218891..2219721) /locus_tag="lmo2134" /note="Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1; Region: TBP_aldolase_IIB; cd00947" /db_xref="CDD:238477" misc_feature complement(order(2218993..2218995,2219002..2219004, 2219014..2219016,2219023..2219028,2219032..2219037, 2219308..2219310,2219527..2219532,2219539..2219541, 2219551..2219553,2219563..2219568,2219572..2219574, 2219581..2219583,2219641..2219643,2219650..2219658)) /locus_tag="lmo2134" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:238477" misc_feature complement(order(2219035..2219040,2219044..2219046, 2219101..2219103,2219107..2219112,2219191..2219193, 2219197..2219205,2219485..2219490)) /locus_tag="lmo2134" /note="active site" /db_xref="CDD:238477" misc_feature complement(order(2219110..2219112,2219200..2219202, 2219485..2219487)) /locus_tag="lmo2134" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:238477" misc_feature complement(order(2219101..2219103,2219107..2219109, 2219191..2219193,2219197..2219199,2219203..2219205)) /locus_tag="lmo2134" /note="Na+ binding site [ion binding]; other site" /db_xref="CDD:238477" regulatory complement(2219741..2219746) /regulatory_class="ribosome_binding_site" gene complement(2219751..2220845) /locus_tag="lmo2135" /db_xref="GeneID:984713" CDS complement(2219751..2220845) /locus_tag="lmo2135" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIC" /protein_id="NP_465659.1" /db_xref="GeneID:984713" /translation="MKKLQIKKHALTAISYMLPLVVASGLLIAIGNLTNGQVIENYKA PYSIPDALVSLGVLGMGLLAPVIAGAIAYSIADRPGIAPGLLMGLIANSIGAGFLGGM LGGYLVGYFVLILVKYLKVPKWAQGLMPMMIIPLISSLVVGLLMYFVVGVPIVWATEA MTSFLQGMQGSMRFVFGAVLGAMAAFDFGGPVNKVASLFADGLLLEGVKEPEAVKILA SMVPPFGVTLSWVVSKLIKKKKYTKSEEDNIKIAFPMGICMITEGVIPIAAVDPIRVI ISCTLGAAVGGGLSMTWGIGSPVPSGGMFIVPAMNEPLLFCLALLIGTCVTAAMLLIL KREPTKEEELIADQGLEEEDEVDLSGIKIS" misc_feature complement(2219808..>2220842) /locus_tag="lmo2135" /note="Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism]; Region: FrwC; COG1299" /db_xref="CDD:440910" regulatory complement(2220857..2220862) /regulatory_class="ribosome_binding_site" gene complement(2220862..2221173) /locus_tag="lmo2136" /db_xref="GeneID:984934" CDS complement(2220862..2221173) /locus_tag="lmo2136" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIB" /protein_id="NP_465660.1" /db_xref="GeneID:984934" /translation="MNIIGIAACTSGIAHTYIAKEKLTKAGLALGHNVHIETQGTIGI EDELSAEQVKNADVVIIAADIKISGKDRFKGKRVVEIPTDLAIKAPKQIINKIDKEIN N" misc_feature complement(2220883..2221170) /locus_tag="lmo2136" /note="Phosphotransferase system fructose-specific component IIB [Carbohydrate transport and metabolism]; Region: FrwB; COG1445" /db_xref="CDD:441054" regulatory complement(2221182..2221187) /regulatory_class="ribosome_binding_site" gene complement(2221186..2221659) /locus_tag="lmo2137" /db_xref="GeneID:986283" CDS complement(2221186..2221659) /locus_tag="lmo2137" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIA" /protein_id="NP_465661.1" /db_xref="GeneID:986283" /translation="MDIQELDISKVISPALVNLDLQATSKLEVIEELTDLLVETGAVA DKDAFIADVLYREEEGKTGLGEGVAIPHGKSTSVTSTSIAVGRTKNLVEWESLDDKPV NIIILFAVKNSDATTTHIKLLQKVAILLADDEVIGQFQTVQTKEDFIKLLAKNQD" misc_feature complement(2221192..2221641) /locus_tag="lmo2137" /note="Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) [Carbohydrate transport and metabolism, Signal transduction mechanisms]; Region: PtsN; COG1762" /db_xref="CDD:441368" regulatory complement(2221667..2221672) /regulatory_class="ribosome_binding_site" gene complement(2221671..2223128) /locus_tag="lmo2138" /db_xref="GeneID:984707" CDS complement(2221671..2223128) /locus_tag="lmo2138" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_465662.1" /db_xref="GeneID:984707" /translation="MLLTKSEHALINLFLTKNDFLTAKQLAEILDVSSKTIYRKIKNI NETTGRKDIIISEKGRGFKLDYKAYIQAKLETTGDIFGYTPTERREKILLQVLFKSPK YLNVTELYEDYYVGYNSIKNDFSLLNQAIEKYDLALEKRQKEIRVVGTEENIRTAINE VINNLDLSTYDDLKTEYSDLNKADVQFIVRQMELIENKLMISIPYPYDINIFSHLYIL INRFRQGEVEDFKESDDDYIVTNEKLHTLAVEAIDAIEQYLKMKLPKRETFHFLQYLI SSRFNHEIELVPGKILPIVEEMTDFYIEQVAAKINMPINKKQLKIELLSHMKPMVNRM NHQINIKNNLLSDIKLEYGKLFEIIKETARDAAKTFELNTISDDEVGYITIYFAKHIE ASPLVKRIIIMCSSGIGTSELLKVKVQKAFPDVEIVDVLSSTRFKNSLHDYQNIDFIL TTINTESTKEIPSLLVSAMFTEKDKIMVKKLMESL" misc_feature complement(<2221674..2223101) /locus_tag="lmo2138" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" regulatory complement(2223136..2223141) /regulatory_class="ribosome_binding_site" regulatory 2223311..2223316 /regulatory_class="ribosome_binding_site" gene 2223324..2224226 /locus_tag="lmo2139" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984576" CDS 2223324..2224226 /locus_tag="lmo2139" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465663.1" /db_xref="GeneID:984576" /translation="MTLELHNVTKKFGTKVAVNDLSFRVEPGKILGLIGQNGAGKTTT FRLILHFLEATSGKITWDGKEVSKIDPNIIGYLPEERGLYPNVTIEEQLIFFAELKGY PKQKIKAEIDSWLERAEIVGKKTDLIKTLSKGNQQKIQLLSTIIHQPKLVILDEPFSG LDPVNAEILKKFVFDLRASGAAIIFSSHRMENVEELCDSLLMLKKGNVVLQGTTESVK SVFGRKRILIESSHSAAELATLPGVLNVQTHRDGVLQLEIAHESDAEKIFDYVTKDGF IQTFSLQAPTLEEIFKWKAGELNE" misc_feature 2223327..2224223 /locus_tag="lmo2139" /note="ABC-type uncharacterized transport system, ATPase component [General function prediction only]; Region: YhaQ; COG4152" /db_xref="CDD:443322" regulatory 2224204..2224209 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2139" gene 2224219..2225454 /locus_tag="lmo2140" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:988001" CDS 2224219..2225454 /locus_tag="lmo2140" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_465664.1" /db_xref="GeneID:988001" /translation="MSKFWVITKQVYKRRVKTKSFLISLLFPVLIAALIAGIPKMVDY FDSSSDITKLAVLAEDPVFAKSLAADKNHFKVNTDIKDKKSAQSALKDGKIDGFVTIT QKDDSVSAVYTTQETAGQDIITRLTKDLTATKIAEKAAAYKITNEQLQSITSPVSVTN DLESNNQLTNHEKDVMSAAVLILTLIIFIFVMSYANIVASEIATEKGTRIMEVILSSV SATTHLFAKLTAIIFMLLTQIGFYIICGAIVLIAGRNTEMVQNVLDQIAVFPAYYLVL NLLFVILGLLLYILLAAMIGSMVPNVETVAQFIYPMTILAIIGYWGSIAAANAPDKML VIIGSYIPTFSPMMMLARMDLLSVSTIGIFSSLAILLVSVVGAFFLTVRLYQGNVLLY SNDGLWKTWKTSLSYAKRK" misc_feature 2224219..2225430 /locus_tag="lmo2140" /note="ABC-type Na+ efflux pump, permease component NatB [Energy production and conversion, Inorganic ion transport and metabolism]; Region: NatB; COG1668" /db_xref="CDD:441274" regulatory 2225454..2225460 /regulatory_class="ribosome_binding_site" gene 2225471..2225944 /locus_tag="lmo2141" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984706" CDS 2225471..2225944 /locus_tag="lmo2141" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465665.1" /db_xref="GeneID:984706" /translation="MQIRLSKREDAASMIELEHLVWTPGTTPGDIHFDSEAEFLLKSP PGSKIVVVTDDKVVGILGYKSPIPLASNKHVAEIDIAVHPDYQRAGIGQLLMDKMKEV AREKGYIKIALRVLSINQKAIRFYEKNGFKQEGLLEKEFIIQGEFVDDILMAYFL" misc_feature 2225471..2225941 /locus_tag="lmo2141" /note="L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; Region: MnaT; COG1247" /db_xref="CDD:440860" gene 2226024..2226532 /locus_tag="lmos81" /db_xref="GeneID:18245165" misc_RNA 2226024..2226532 /locus_tag="lmos81" /product="rli47" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245165" regulatory complement(2226521..2226548) /regulatory_class="terminator" gene complement(2226533..2227198) /locus_tag="lmo2142" /db_xref="GeneID:985289" CDS complement(2226533..2227198) /locus_tag="lmo2142" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2142" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465666.1" /db_xref="GeneID:985289" /translation="MEKSGFVADPIYGEIKNEIMANTLENGEKVDIEDIMKRFQVSKR VAFSALHCLHKSGILCKNIGESGFSVAVNSEAEHREKSRLKLAFFHLNYAVQKLQEQD AELCATCLRKELVYIKLAAREHDTEVFINHVKNFYACMIHYTEMPAMEKNIDILSQTL RNMKEKNEKLFFEAFTIDVSQALEELVTHLEAKEFEKCHTVIQQFYDKNISILFSESK NPE" regulatory complement(2227207..2227212) /regulatory_class="ribosome_binding_site" regulatory 2227399..2227404 /regulatory_class="ribosome_binding_site" gene 2227412..2229154 /locus_tag="lmo2143" /db_xref="GeneID:984703" CDS 2227412..2229154 /locus_tag="lmo2143" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465667.1" /db_xref="GeneID:984703" /translation="MSTYDLAPEVKIHQFDGAWAGYKDIAGELLTAIQKKNNEHIIVA IECYPGTRNEEIVAELLPLLPVEKAVFADEWALNNEEVTNKVQSHLTDDRVFGIMSHY EVSDFYPAEKLAEIQAEISASKGLVVIYGTGATVIAPNPDILIYADLARWEIQCRYRR ENKPNWKADNANEDALRKFKRGYFFEWRMADRQKKKLYQQIDFLLDTNKKNEPKMVRG EDYRNGLKQVSKAPFRVVPYFDASVWGGQWMKNNFGLDPTADNYGWAFDGVPEENSLY MRFGDIRIEVPSTNVVNHFPNELLGPKVHSRFGTEFPIRFDYLDTVGGGNLSLQVHPL VEYAQDKFGIHYTQDESYYILEADSDSTVYLGTKEGTTKEAIMADLEKAAEGNYRFPD EKYINVFPVKKHDHILIPAGTIHCGGPSTVVLEISATPYIFTFKLWDWERTGLDGMPR PVHLEHGRENLQLDRDTKWVNDNLINQFETLHEDNDSKVERTGLHELEFIETQRHWFK ETVTVHTNDSVNMLNLVEGTSAVVESIDDSFAPFEVHYGETFIVPAIVGTYQIRNTNA SEKVAVIQAFVRNL" misc_feature 2228105..2229148 /locus_tag="lmo2143" /note="Mannose-6-phosphate isomerase, class I [Carbohydrate transport and metabolism]; Region: ManA; COG1482" /db_xref="CDD:441091" regulatory 2229164..2229186 /regulatory_class="terminator" regulatory complement(2229164..2229186) /regulatory_class="terminator" gene complement(2229193..2229927) /locus_tag="lmo2144" /db_xref="GeneID:984704" CDS complement(2229193..2229927) /locus_tag="lmo2144" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="NP_465668.1" /db_xref="GeneID:984704" /translation="MVRKLNKMNDASPLYAQIADDLREKIQSGIWKTGDKIPPELDLC ELYNVSRITVRKAIDELVRENLLYRERAKGTFVRDWEEAEDEHFTLVRSFTNEMKELG KKAATLHAEVEVINADKKIALQLGLAVGDKVLQVKRLRGTKDLAFALFISAIPYRQAY SLQAEDYYGSFYEYLKGFGIVVNQEKEYIEAMLPNREVQEALAIDKQEPILKRVRMTK QKESDFREYSECFYVGKHYRYYIDFE" misc_feature complement(2229199..2229903) /locus_tag="lmo2144" /note="DNA-binding transcriptional regulator, GntR family [Transcription]; Region: MngR; COG2188" /db_xref="CDD:441791" regulatory complement(2229935..2229940) /regulatory_class="ribosome_binding_site" regulatory complement(2230009..2230028) /regulatory_class="terminator" gene complement(2230042..2231058) /locus_tag="lmo2145" /db_xref="GeneID:985144" CDS complement(2230042..2231058) /locus_tag="lmo2145" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465669.1" /db_xref="GeneID:985144" /translation="MKEYFIDRSYKASMGIANAVLVTLGIGLLLQTIGQMTGISFLAT VGAIGKTMLIPGIGVGIAMCLHANTLVTISAAASAVIGGGAVATLAGGGVAITSGEPV GAILAVIVAVWTGKRVTGKTKFDMILIPGVSLLAGGLSGILFAKIMAPILASVSLGIS SLIGGSPLISSMIIAFVFGLLILSPASSAALAIALQLDPTASAAALIGCSVQFVSFAV LSYRDNNWGAFFAQLICTPKLQTPNIIRKPSLMLVPLLTTLIAGPLGVMVFHIQAASE VAGLGLCAFVAPLYLIANYGFSTLAAFILVAVVLPGVIALVVRPFLIKKERLKTGDLT IELQ" misc_feature complement(2230048..2231058) /locus_tag="lmo2145" /note="Membrane regulatory protein PfoR, PTS_EIIC_2 domain (does not regulate perfringolysin expression) [Signal transduction mechanisms]; Region: PfoR; COG3641" /db_xref="CDD:442858" regulatory complement(2231064..2231069) /regulatory_class="ribosome_binding_site" gene complement(2231127..2231981) /locus_tag="lmo2146" /db_xref="GeneID:984701" CDS complement(2231127..2231981) /locus_tag="lmo2146" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="NP_465670.1" /db_xref="GeneID:984701" /translation="MDEALRTYIRVVELQSFTKAAEELHISQPAVSLQLKKLEELYET ELIYRQAKKFILTATGEILYHRAKQLEGLYKQVEDEISLYHHHLKGRLRIGASFTIGE YYLPEVIAKFHALYPDITIELIIENTAKIADKVELLQVDTGLIEGQVSKKDLEISAFS DDEMCIVGRADGSLTEIEQGATWIAREEGSGTREYLDHVLSTNGWNVAEKVVAWSNMA VKQMVLEGMGYTVISKCVVQTEITAGKMQTFNESGSLMRKFSVLKNRQRLENRIAETF LTFLKENQ" misc_feature complement(<2231499..2231969) /locus_tag="lmo2146" /note="DNA-binding transcriptional regulator CynR; Provisional; Region: PRK11242" /db_xref="CDD:183051" misc_feature complement(2231142..2231711) /locus_tag="lmo2146" /note="C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold; Region: PBP2_CysL_like; cd08420" /db_xref="CDD:176112" misc_feature complement(order(2231307..2231312,2231316..2231321, 2231337..2231342,2231343..2231348,2231607..2231627, 2231631..2231633,2231643..2231645,2231652..2231657, 2231661..2231666)) /locus_tag="lmo2146" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176112" regulatory complement(2231989..2231994) /regulatory_class="ribosome_binding_site" regulatory 2232075..2232080 /regulatory_class="ribosome_binding_site" gene 2232087..2233094 /locus_tag="lmo2147" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984698" CDS 2232087..2233094 /locus_tag="lmo2147" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465671.1" /db_xref="GeneID:984698" /translation="MSQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAI LIGIIIRALFPVPDKWFTGIQFSNKVILRAGIILLGFRLNLVDIYHAGWRVFLIAALC LSFGITIVYFLAKLFGVDKKLAILVACGTGICGAAAVVAISPQVKADNNQTAVAATII ALLGTIFTVIYTLIYPILPLGPDGYGIFAGATLHEIAHVIAAADPGGSSAVDMAVIVK LTRVALLVPVCFVVAKMVNAGTKNRFSWAELPVPWFIFGFLATSAINSFGIIPTSVTD FLVICAYFLIAMSMGGLGLNVHLPSFGKMGGKPFAAALIGSVFLSVFGLALVLLFHLA G" misc_feature 2232087..2233082 /locus_tag="lmo2147" /note="Uncharacterized membrane protein YadS, UPF0324 family [Function unknown]; Region: YeiH; COG2855" /db_xref="CDD:442103" regulatory 2233134..2233139 /regulatory_class="ribosome_binding_site" gene 2233150..2233791 /locus_tag="lmo2148" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984697" CDS 2233150..2233791 /locus_tag="lmo2148" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465672.1" /db_xref="GeneID:984697" /translation="MTKAIWTCRAFLLGYFLVLHFTADTYTFLILNVGLAYIPFEIAV FLTKKPRVWWIFWPLGIVWLVFFPNAPYLLTDLLHLQRLEIYGAEGVLSTAPWLWRHF TYIIVGVFFGLFIGFWSFAKMLAEIRRRFNWTSLLSYQLLLIGLILLSSYAIYIGRFS RLHSIHLLTQPIDSLQIMFSVFHWPFWNFVFYFSIIQYVIYTLFSRFSSSLKN" misc_feature 2233159..2233788 /locus_tag="lmo2148" /note="Uncharacterized membrane protein, DUF1361 domain [Function unknown]; Region: COG4330" /db_xref="CDD:443471" regulatory 2233795..2233835 /regulatory_class="terminator" gene complement(2233841..2234158) /locus_tag="lmo2149" /db_xref="GeneID:984696" CDS complement(2233841..2234158) /locus_tag="lmo2149" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465673.1" /db_xref="GeneID:984696" /translation="MDFKEYQILANRTAATHEQALTNYGLGITGEAGEVADLIKKYAF HGHDLDKESLTKELGDVLWYVSQIAKWADISMETVAELNIEKLKRRYPQGFSTERSKL HID" misc_feature complement(2233886..2234146) /locus_tag="lmo2149" /note="Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in a group of uncharacterized proteins from bacteria and archaea; Region: NTP-PPase_u4; cd11541" /db_xref="CDD:212148" regulatory complement(2234166..2234171) /regulatory_class="ribosome_binding_site" regulatory 2234345..2234350 /regulatory_class="ribosome_binding_site" gene 2234357..2234533 /locus_tag="lmo2150" /db_xref="GeneID:984695" CDS 2234357..2234533 /locus_tag="lmo2150" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2150" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465674.1" /db_xref="GeneID:984695" /translation="MKLAGLVLLLIGLIGFGFSFSITGLIGFGVCIISIILVIAGIFT MIRSKKRRKRSYSY" regulatory 2234541..2234569 /regulatory_class="terminator" regulatory complement(2234541..2234569) /regulatory_class="terminator" gene complement(2234575..2234874) /locus_tag="lmo2151" /db_xref="GeneID:984692" CDS complement(2234575..2234874) /locus_tag="lmo2151" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465675.1" /db_xref="GeneID:984692" /translation="MKQLQAEITAFLKERDWLDQYNHPKDLAISLSLEAAELLECFQW KTDEIALKENREELLKEVADVLIYALQIAESMGADGEELVRMKLAENRRRTWPKK" misc_feature complement(2234602..2234862) /locus_tag="lmo2151" /note="Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in mouse RS21-C6 protein and its homologs; Region: NTP-PPase_RS21-C6_like; cd11537" /db_xref="CDD:212144" misc_feature complement(order(2234602..2234607,2234611..2234616, 2234620..2234628,2234632..2234637,2234641..2234643, 2234647..2234652,2234656..2234661,2234668..2234670, 2234674..2234679,2234683..2234691,2234695..2234703, 2234746..2234751,2234758..2234763,2234770..2234772, 2234779..2234784,2234788..2234793,2234800..2234805, 2234824..2234826,2234830..2234835,2234842..2234844, 2234851..2234856)) /locus_tag="lmo2151" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:212144" misc_feature complement(order(2234671..2234673,2234683..2234685, 2234692..2234694,2234764..2234766,2234773..2234775, 2234851..2234853)) /locus_tag="lmo2151" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:212144" misc_feature complement(order(2234671..2234673,2234746..2234751, 2234758..2234760,2234764..2234769,2234776..2234781, 2234785..2234793,2234797..2234802,2234812..2234814)) /locus_tag="lmo2151" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:212144" regulatory complement(2234882..2234887) /regulatory_class="ribosome_binding_site" regulatory complement(2234936..2234976) /regulatory_class="terminator" gene complement(2234982..2235308) /locus_tag="lmo2152" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984598" CDS complement(2234982..2235308) /locus_tag="lmo2152" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="NP_465676.1" /db_xref="GeneID:984598" /translation="MTSIEIKSPEEFQAHINGEELVYVDYWKDNCPNCKMLDLSFAEF KNSEIASKVKVLKVKLEEMGENFFFDRDVQQTPTLVLYKGGEEIHRLNGFIPPNKIEE AVSLNA" misc_feature complement(2234997..2235281) /locus_tag="lmo2152" /note="TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox...; Region: TRX_family; cd02947" /db_xref="CDD:239245" misc_feature complement(order(2235207..2235209,2235216..2235218)) /locus_tag="lmo2152" /note="catalytic residues [active]" /db_xref="CDD:239245" gene complement(2235305..2235742) /locus_tag="lmo2153" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985637" CDS complement(2235305..2235742) /locus_tag="lmo2153" /experiment="EXISTENCE:[PMID:19448609]" /note="An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group" /codon_start=1 /transl_table=11 /product="flavodoxin" /protein_id="NP_465677.1" /db_xref="GeneID:985637" /translation="MRILLAYDSLSGNTKMVADEIEEILISEGHEVVSFRVSPLAEYP LDEDFDLYVLGAWTVDYGRTPPDMKDFIAELAVKPKNVAIFGTGETQWGMDFYCGAVD RMAKYFGTSYPTLKIEQMPHTEQDVADIDNWVRKILALRSGIK" misc_feature complement(2235317..2235742) /locus_tag="lmo2153" /note="flavodoxin; Provisional; Region: PRK09271" /db_xref="CDD:181744" regulatory complement(2235317..2235322) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2153" gene complement(2235739..2236788) /gene="nrdF" /locus_tag="lmo2154" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984690" CDS complement(2235739..2236788) /gene="nrdF" /locus_tag="lmo2154" /EC_number="1.17.4.1" /experiment="EXISTENCE:[PMID:19448609]" /note="B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE" /codon_start=1 /transl_table=11 /product="ribonucleotide-diphosphate reductase subunit beta" /protein_id="NP_465678.1" /db_xref="GeneID:984690" /translation="MANQKEQLTRIKILEPLFPNRSTSIINGETSGILNWNDIPYPSF YRAYKELSTNYWIPDEVDMKSDAKQYPALSEQEKYAFDAIIGLLATLDSPQTRFIYNI AEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQNRVFELARTHPTIIKRNE PIMDAYDDFMNNKTGETLVKALIQSSILEGINFYSGFAYFYNLVRQNKMTGTGKIISF INRDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWSEEVLQGIE GIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRN SSYKKTNMDNGFDDL" misc_feature complement(2235742..2236722) /gene="nrdF" /locus_tag="lmo2154" /note="ribonucleotide-diphosphate reductase subunit beta; Reviewed; Region: nrdF; PRK09614" /db_xref="CDD:236591" misc_feature complement(order(2236339..2236341,2236348..2236353, 2236399..2236401,2236408..2236410,2236417..2236422, 2236429..2236431,2236438..2236443,2236633..2236635, 2236654..2236656,2236687..2236689)) /gene="nrdF" /locus_tag="lmo2154" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:153108" misc_feature complement(order(2236111..2236113,2236123..2236128, 2236402..2236404,2236414..2236416,2236423..2236425, 2236513..2236515,2236621..2236623)) /gene="nrdF" /locus_tag="lmo2154" /note="putative radical transfer pathway [active]" /db_xref="CDD:153108" misc_feature complement(order(2236111..2236113,2236120..2236122, 2236222..2236224,2236414..2236416,2236423..2236425, 2236513..2236515)) /gene="nrdF" /locus_tag="lmo2154" /note="diiron center [ion binding]; other site" /db_xref="CDD:153108" misc_feature complement(2236402..2236404) /gene="nrdF" /locus_tag="lmo2154" /note="tyrosyl radical; other site" /db_xref="CDD:153108" regulatory complement(2236799..2236804) /regulatory_class="ribosome_binding_site" gene complement(2236844..2239135) /locus_tag="lmo2155" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984725" CDS complement(2236844..2239135) /locus_tag="lmo2155" /EC_number="1.17.4.1" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the rate-limiting step in dNTP synthesis" /codon_start=1 /transl_table=11 /product="ribonucleotide-diphosphate reductase subunit alpha" /protein_id="NP_465679.1" /db_xref="GeneID:984725" /translation="MKWGLQMTTYIVKDGGNRKLPFDKSRLDGYLEKIHEEFPKLDLE DYKRKVFNFVEKKEDYAADELVDYLIREAEARTDIHIPEWEHFAARLYLNKLYKKASK NRFYNDDDKYGSYVGLQESLGERGIYSGNILKNYSKEDLIAAGKLIDPEKDKLFTYNG LYLLATRYLATDSERNVYELPQERWLTIALYLMQNEPKEKRMKLVEEAYWALSNLYMT VATPTLANAGKVGGQLSSCFIDTVDDSLQGIYDSNTDVARVSKHGGGVGAYLGYVRST GAAIRGVKGASGGVIPWIKQLNNTAVSVDQLGQRKGAIAVYLDVFHKDIESFLDLRLN NGDQRLRAHDVFTAVCIPDIFMEAVERRGEWYLFDPHEVKAKKGWYLQDFYDESKGEG TFREKYEELVADETISKKIVKAIDIMKRIMMSQLETGNPFMFYRDEVNRMNPNKHEGM VYSSNLCTEIMQNMSPTKMIQEIISGDQIVITKQAGDFVVCNLSSVNLGRAVVAEEGT LERLIEVEVRMLDNVIDLNELPVPQATITNQKYRSIGLGTFGWHHLLALKNIAWDSEE AEKYADELYEQINYLAIRASNKLAQEKGAYKVFKGSDWNTGEYFARRNYNSPEWQELA KEVAEKGLRNAYLVAVAPNMSTAQIAGSTASIDPIYSAFYYEEKKDYRRPVIAPDLNL STYPYYEKGAYKVDQFASVRQNGRRQRHVDQSLSFNFYVPSGIKASKLLELHMTAWNE GLKTTYYVRSNDIDVEECEWCSS" misc_feature complement(2236847..2239135) /locus_tag="lmo2155" /note="ribonucleoside-diphosphate reductase subunit alpha; Region: PRK09209" /db_xref="CDD:181700" regulatory complement(2239144..2239149) /regulatory_class="ribosome_binding_site" regulatory 2239658..2239663 /regulatory_class="ribosome_binding_site" gene 2239672..2240013 /locus_tag="lmo2156" /db_xref="GeneID:988000" CDS 2239672..2240013 /locus_tag="lmo2156" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2156" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465680.1" /db_xref="GeneID:988000" /translation="MFTKKRGLMLLAAVLLTVCAIWEYAMPTDAAVKSYYVKVEDAGK PVQKNQFKGFKYVSNVYDDKGKQKQLTFYSEKELTKNEQFKVLVGENKMVVNYKKIKN VPDKIKYLAEK" misc_feature 2239681..2239989 /locus_tag="lmo2156" /note="Protein of unknown function (DUF1093); Region: DUF1093; cl02185" /db_xref="CDD:470488" regulatory 2240018..2240054 /regulatory_class="terminator" regulatory complement(2240018..2240054) /regulatory_class="terminator" gene complement(2240068..2241969) /gene="sepA" /locus_tag="lmo2157" /db_xref="GeneID:987998" CDS complement(2240068..2241969) /gene="sepA" /locus_tag="lmo2157" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465681.1" /db_xref="GeneID:987998" /translation="MTKKVLPKEASEFTKKVNEKVKKSLPFENTKDFDDAKKGFIGTW DHVKVDTEDGHAVWDLEDYKFIEGEAPDSVNPSLWRIAQLNMTNGLFKVTDRVYQVRG FDMSNTTIMEGDTGLVITDTLMSVETARAALDLYYEHRPKKPIKAIIYTHSHADHYGG VAGLISKEDVASGKVALIGPEGFMEAAVSENIFAGNAMIRRAEYMYGSRLSRGELGQV DAGLGKTASKGHMSLLAPNDTITFDHEKRVVDGIEVEFLMAPNTEAPSEHMMYFPQFK LLNIAEDAVHNLHNILTLRGAQIRDAYEWWKDIDKAIRAFGDKYEVCIGQHHWPTWGN EEINDMLIHQRDAYKYMHDQTLHFINKGLTAIEVAEAVKFPPALEEKWYLRGYYGTLN HDVKAIYQFYLGWYDGNPADLYPLPPEDVAKKYVEFMGGVDEVLKKARVSYEAGEYRW VAEVVKHAVFADGENGEARALLADALEQLGYQSESGPWRNVFLAGADELRNSVPDEVI SGVTLDIVEGMPFNLILDYMGIRLNGERSIGKRISMNWKLTDVDENYHLLVNNSVLIY REGEVDDKADLTLTTTRDTFNHIFGGVKSFEAAFADQTAKLEGDVKKFGEFASLLDEF NPVFNIVTP" misc_feature complement(2240077..2241951) /gene="sepA" /locus_tag="lmo2157" /note="Alkyl sulfatase BDS1 and related hydrolases, metallo-beta-lactamase superfamily [Secondary metabolites biosynthesis, transport and catabolism]; Region: BDS1; COG2015" /db_xref="CDD:441618" regulatory complement(2241979..2241984) /regulatory_class="ribosome_binding_site" regulatory complement(2242054..2242087) /regulatory_class="terminator" gene complement(2242097..2242282) /locus_tag="lmo2158" /db_xref="GeneID:984441" CDS complement(2242097..2242282) /locus_tag="lmo2158" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465682.1" /db_xref="GeneID:984441" /translation="MSEDKGMKDKAKGLKDKVVGDAKDKFGKATDDKGKQVEGKAQKA KGEVEDKTGDAKKKLSE" misc_feature complement(2242100..2242258) /locus_tag="lmo2158" /note="CsbD-like; Region: CsbD; pfam05532" /db_xref="CDD:428512" regulatory complement(2242291..2242296) /regulatory_class="ribosome_binding_site" gene complement(2242376..2243425) /locus_tag="lmo2159" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986640" CDS complement(2242376..2243425) /locus_tag="lmo2159" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_465683.1" /db_xref="GeneID:986640" /translation="MKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILEEKREAA AEKGLKIYESFEAVLADEKVDAVLIATPNDSHKELAITALEAGKHVVCEKPVTMTSED LLAIMDVAKKVNKHFMVHQNRRWDEDFLIIKEIFEQKTIGEMFHLESRVHGANGIPGD WRHLKAHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFALGDEVDDGFVTFITFEN GITAQIEVGTTNFIKLPRWYVKGTEGTGIIHDWDLSGEIVQPTALAKTSEPTPIKAGQ GLTKTMAPPSEEATNTLSLPAPAKLAPSFYNNFIDVLNNTSEPIVQNEEVYQVLKLIE AIFEAAETNRTIHSI" misc_feature complement(2242385..2243425) /locus_tag="lmo2159" /note="Predicted dehydrogenase [General function prediction only]; Region: MviM; COG0673" /db_xref="CDD:440437" regulatory complement(2243433..2243438) /regulatory_class="ribosome_binding_site" gene complement(2243448..2244416) /locus_tag="lmo2160" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984686" CDS complement(2243448..2244416) /locus_tag="lmo2160" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465684.1" /db_xref="GeneID:984686" /translation="MKLGVFTPLFANLSLEEMLDKVKAAGLDAVEIGTGGNPGNHHCP TDELLASEAARKEYLEKFTSRGLTISAFSCHDNPISPNKEEAAASDEILRKSIKLASL MNVPVVNTFSGTAGDSDDAKAPNWPVIPWPTVYSDIKTWQWETKLIPYWKEIGELAAA SGVKIGIELHGGFLCHTPYTILKLREETNDSIGVNLDPSHLWWQGIDPVGAIKILGKA GAIHHFHAKDTYLDQDNINMYGLTDMQPYGDVQTRSWTFRSVACGHSLTEWSDIMSAL RTYGYDYVVSIEHEDPLMSIDEGFDRAVTNLQSILIKDKPLDMWWA" misc_feature complement(2243484..2244416) /locus_tag="lmo2160" /note="Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism]; Region: YcjR; COG1082" /db_xref="CDD:440699" gene complement(2244419..2245141) /locus_tag="lmo2161" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984682" CDS complement(2244419..2245141) /locus_tag="lmo2161" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2161" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465685.1" /db_xref="GeneID:984682" /translation="MTRVTVWNEFLHEKEDDAVLAIYPDGIHGQIASFLEKAGIEAGT ATLEEPEHGLTEEVLANTDVLIWWGHMGHDRVEDKIVDRVQKRVLEGMGLVVLHSGHM SKIFMRLMGTSCDLKWREANERERLWVVDPTHPIAKGIGEFIELDEEEMYGEHFDIPT PDELIFLGWFEGGEVFRSGITYKRGNGRIFYFQPGHESYPTYHHPDIQQVIINGVHWC AEGRKNYPAYGNHQPLEKIGRK" misc_feature complement(2244422..2245141) /locus_tag="lmo2161" /note="Trehalose utilization protein [Carbohydrate transport and metabolism]; Region: ThuA; COG4813" /db_xref="CDD:443841" regulatory complement(2244425..2244430) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2161" gene complement(2245143..2245883) /locus_tag="lmo2162" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984679" CDS complement(2245143..2245883) /locus_tag="lmo2162" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465686.1" /db_xref="GeneID:984679" /translation="MKAKIALQLWSVKEACEDDFFGTLEKVAEMGYDGVEFAGYYGKS ASEIKAKLAELGLEVAGSHISKEQLEVDLENVILFERELGNEYIICPYADFKTKQEWL AFSEKLLEITKTVQQAGMHFGYHNHAHELDKLDDEIILDSLLKNVPEMVAELDTYWIE YAGIGVIPFIEKYRNRVPLIHIKDKSRANKESTIIGEGVLDVPGFVKTALHSGTKWLI IEQEAFTQDPLTSVAKGYTYLANVLEEN" misc_feature complement(2245155..2245874) /locus_tag="lmo2162" /note="Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism]; Region: YcjR; COG1082" /db_xref="CDD:440699" regulatory complement(2245151..2245156) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2162" regulatory complement(2245891..2245896) /regulatory_class="ribosome_binding_site" gene complement(2245899..2246975) /locus_tag="lmo2163" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986812" CDS complement(2245899..2246975) /locus_tag="lmo2163" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_465687.1" /db_xref="GeneID:986812" /translation="MTLKVGIIGCGGIANGKHMPSLLKAEKAEMVAFCDIVLEKAEAA AKEFGSENASVYTNYVELLQDKSIDVIHVCTPNISHAEISIAAMEAGKHVMCEKPMAK TTEEAKSMIEAAERTGKKLTIGYQNRFRKDSDYLHQVCENGELGDIYYAKAKAIRRRA VPTWGVFLDEEAQGGGPLIDIGTHALDLTLWMMDNYKPKYVVGNSYHKLAKKENAANA WGSWDPNKFTVEDSAFGFITMENGATIVLEASWTLNTLDVGEARTSLSGTEGGADMED GLRINGEAHSQMYEKKIQLEAGGVDFYDGTGDDPALIEAEQWLEAIEKNTDPVVKPEQ ALVVTQILEAIYESSKTGQPVYFN" misc_feature complement(2245905..2246975) /locus_tag="lmo2163" /note="Predicted dehydrogenase [General function prediction only]; Region: MviM; COG0673" /db_xref="CDD:440437" regulatory complement(2246985..2246990) /regulatory_class="ribosome_binding_site" gene complement(2247050..2247928) /locus_tag="lmo2164" /db_xref="GeneID:986022" CDS complement(2247050..2247928) /locus_tag="lmo2164" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="AraC family transcriptional regulator" /protein_id="NP_465688.1" /db_xref="GeneID:986022" /translation="MSEYLEIPELNKAFPFRSFVNEGEVLVYPHWHKEIEIIYALKGS LNLGINDMPIQLKEGEIQVINGGDVHYFLASPSSERIVIQFDLSLFQEEMQMDDKMQT LREMLTEMAHLSREWPEETVAKMQSLIMNIHSESSGEKPGKHYILKADLLAIIGLIYR EIPQIKTQPDSVISEDAVLKSQETLHKLDQIFSYVEKHYQEPVSLQEVANYTGFSTYY FTKFFKRNTGMTFVTFLNDYRLNKAKWMLLNEAFPVTEVAELAGFSSVKTFHHAFKRA MGVAPLKYRKTIYGNN" misc_feature complement(2247071..2247841) /locus_tag="lmo2164" /note="transcriptional regulator MelR; Region: PRK10371" /db_xref="CDD:182416" misc_feature complement(2247074..2247325) /locus_tag="lmo2164" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" regulatory complement(2247935..2247940) /regulatory_class="ribosome_binding_site" regulatory complement(2247968..2247991) /regulatory_class="terminator" gene complement(2247998..2248693) /locus_tag="lmo2165" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985896" CDS complement(2247998..2248693) /locus_tag="lmo2165" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Crp/Fnr family transcriptional regulator" /protein_id="NP_465689.1" /db_xref="GeneID:985896" /translation="MNTLEKRQHEILTNPLHFCKKSGDFAKHSMSIKLSKNELFDVDF VTGIYFVEKGIVMKGTQIDDYIGYDQLLKHGDVCNFSSFMSSDLKRNIGAQLLSPSSS VITAVDRDFFIFMVEKHVSIEEFMLYQAKKEIMILQRRCLLNTLKVKDRVKHLIAAIG YEYGISNGDNIQIPQELSTTFLSKFMGITREYLSLTLSELKKEGYLLNTKIPVVINVE KLFNEIPYESLIL" misc_feature complement(2248034..2248624) /locus_tag="lmo2165" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" regulatory complement(2248702..2248707) /regulatory_class="ribosome_binding_site" gene complement(2248946..2249617) /locus_tag="lmo2166" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984431" CDS complement(2248946..2249617) /locus_tag="lmo2166" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2166" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465690.1" /db_xref="GeneID:984431" /translation="MHSDEEIFKETTPKALLQLLKKDYTFHDYCYQEIIPRGKEIKMN NSKGFKIYLVESGYFSYCLQNEYGDSGIISFVGGEIAINLIPIIKEEPEESVLRSLTE VHCWVLDPDFVERVLDESGQKAKYLLSNLLYTRKVYFKASKRNFMKKELRIRACLKEI GLYMGRVTKDKEFILPDEINNSILAQYANTTREYTNIIVLKLRKEGILDDSHKPWVIK KIDTL" misc_feature complement(2248949..2249542) /locus_tag="lmo2166" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" regulatory complement(2249625..2249630) /regulatory_class="ribosome_binding_site" regulatory complement(2249653..2249673) /regulatory_class="terminator" gene complement(2249683..2250300) /locus_tag="lmo2167" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984677" CDS complement(2249683..2250300) /locus_tag="lmo2167" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465691.1" /db_xref="GeneID:984677" /translation="MTKIKRIMTGIIQENCYIIYQDNVALIVDPGDEASKIEAEIAKL EVKPVAVLLTHCHYDHIGALEEIRKTYNIPVYVSPLEQEWLSNPELNLSAHIAGKAII AQPAENEFTLGEYNIEGFRFKVVPTPGHSIGSVSFIFDEFVVVGDALFKGSIGRTDLY TGDFDMLINSIKTQLFVLPDDFPAYSGHGDVTTIGHEKKTNPYFN" misc_feature complement(2249737..2250288) /locus_tag="lmo2167" /note="mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain; Region: metallo-hydrolase-like_MBL-fold; cd06262" /db_xref="CDD:293792" misc_feature complement(order(2249737..2249739,2249860..2249862, 2249908..2249913,2250121..2250126,2250130..2250132, 2250136..2250138)) /locus_tag="lmo2167" /note="active site" /db_xref="CDD:293792" regulatory complement(2250308..2250313) /regulatory_class="ribosome_binding_site" regulatory 2250418..2250423 /regulatory_class="ribosome_binding_site" gene 2250431..2250820 /locus_tag="lmo2168" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984676" CDS 2250431..2250820 /locus_tag="lmo2168" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glyoxalase" /protein_id="NP_465692.1" /db_xref="GeneID:984676" /translation="MTAKMLHTCIRVKNLTESITFYEKALGLKEVRRKDFPDFEFTLV YMAFEEGGFELELTYNYDQKEAYDLGNGYGHLAVGVLDVRALLKEHQEAGFTVTDLKG LPGEDPFYYFLTDPDGYKTEIIQDGAL" misc_feature 2250443..2250811 /locus_tag="lmo2168" /note="vicinal oxygen chelate (VOC) family; Region: VOC; cl14632" /db_xref="CDD:472697" gene 2250846..2251004 /locus_tag="lmo2169" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985889" CDS 2250846..2251004 /locus_tag="lmo2169" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2169" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465693.1" /db_xref="GeneID:985889" /translation="MGKYFVIILIALAINGISILFHNDIASLIAVIITAVLLIYLMVD LTKMYRRK" regulatory 2251010..2251042 /regulatory_class="terminator" regulatory complement(2251010..2251042) /regulatory_class="terminator" gene complement(2251050..2251979) /locus_tag="lmo2170" /db_xref="GeneID:984604" CDS complement(2251050..2251979) /locus_tag="lmo2170" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465694.1" /db_xref="GeneID:984604" /translation="MSLTEMLQIKYPILQGAMAQIATYELASAVSNAGGLGIIASGGM SADALREQIRLCKEKTTKPFAVNIMLMMPNCPELVDVIIEEDVRVVTTGAGTPKPFME KFKAAGIKVIAVIPSVKIAQKMEEIGVDAVVAEGTEAGGHVGETTTMALVRQVVSAVN IPVIAAGGIADGHGMAAVYALGASGVQIGTLFLVAEECPVPASFKQAVLDATDTSTTV TGRRNGAPVRSIKNPMIQKYVELENENASRDKLEELTLGSLRKAVHEGDVENGSVMAG QICGMLTEIRSTSDIIENLMKESKQVASNLVIQ" misc_feature complement(2251062..2251973) /locus_tag="lmo2170" /note="putative enoyl-[acyl-carrier-protein] reductase II; Region: enACPred_II; TIGR03151" /db_xref="CDD:132195" regulatory complement(2251987..2251992) /regulatory_class="ribosome_binding_site" gene complement(2252001..2253224) /locus_tag="lmo2171" /db_xref="GeneID:984675" CDS complement(2252001..2253224) /locus_tag="lmo2171" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MFS transporter" /protein_id="NP_465695.1" /db_xref="GeneID:984675" /translation="MTKEINRWGVLIGSVGVLLCTGAVYAFSVFAGPLSAAHGWTIPQ VVMAFTINAAIGPIPTILGGILTDKGKAKWAILIGGILFGLGFALTGFATSTTMLYLS YGVLAGLGQGFAYSGCLSNTIRLFPDKRGLASGLITAGMGGATIIAAPIANYLIETYN VMTAFKIMGAVYIAVVIGCSFLIRVAPAGYTPKGWTPPANNVAGMVNVPWTGMVRTVT FYLILLMLGIGAFSGLMIASNASLIGQNMFGLTAASAAAYVSIYSLSNCLGRVVWGAV SDRLGRSNTLMIIYTVIALSLLALTTLQSVVGFVIGIIGLGLCFGGTMGVFPSIVMEN YGPKNQGVNYGIVFIGYSTAAFFAPKMAAQIAGQNGGDFTQAFYIAIALAAVGLCINI VYKLREKKQPTKELA" misc_feature complement(2252049..2253209) /locus_tag="lmo2171" /note="Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; Region: MFS_OFA_like; cd17353" /db_xref="CDD:340911" misc_feature complement(order(2252160..2252162,2252169..2252174, 2252181..2252186,2252193..2252195,2252241..2252243, 2252253..2252255,2252265..2252270,2252415..2252417, 2252427..2252429,2252511..2252513,2252520..2252528, 2252535..2252540,2252547..2252549,2252790..2252792, 2252799..2252804,2252811..2252813,2252868..2252870, 2252877..2252885,2252889..2252894,2253045..2253047, 2253150..2253152,2253159..2253164,2253171..2253176)) /locus_tag="lmo2171" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340911" gene complement(2253221..2254804) /locus_tag="lmo2172" /db_xref="GeneID:984671" CDS complement(2253221..2254804) /locus_tag="lmo2172" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="propionate CoA-transferase" /protein_id="NP_465696.1" /db_xref="GeneID:984671" /translation="MSKVIKASEAAKLLKDGDTVAFSGFGLACVNEEMAIAVEKRFLE EGAPRNLTVMHASALGDRREKGMSHWGHEGLIKRWIGGIAIASPKMAKLIEEDKCEAY NLPQGVITQLYREIAAKRPGVITKIGMGTFVDPRIEGAKMSASSKDNLVELLTIHNEE WLFYPSFPIQVALIRGTVADEFGNLTLEKEGLHMEVLPIAQAVRNSGGIVIAQVESVA KKGSLNPKDVRVPGILVDHIIISEPENHFQTENTQYNPAFSGHIQVPLGDIEPLPLDD RKVIARRSAAELEPQTILNLGVGIPVNVSTVAAEEGVSDQLILTTEAGSVGGVPAGLA DFGHAYNSEAIVDHHSQFDFYDGGGLDLSVLGLAQTDESGNVNVSKFGSRVAGCGGFI NISQSAKKLIFAGTFTAGGLKTRVAAGKLEILQEGKAKKFIKQVQQITFSGEYASTTN QTILYVTERAVFRLENGKMVLTEIAPGIDLEKDILGQMEFEPIIASDLKVMDGGMFSE EWGGLKAIIEKQTREGVSI" misc_feature complement(2253269..2254801) /locus_tag="lmo2172" /note="Acyl CoA:acetate/3-ketoacid CoA transferase [Lipid transport and metabolism]; Region: YdiF; COG4670" /db_xref="CDD:443707" regulatory complement(2253234..2253239) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2172" regulatory complement(2254812..2254817) /regulatory_class="ribosome_binding_site" gene complement(2255034..2256401) /locus_tag="lmo2173" /db_xref="GeneID:984670" CDS complement(2255034..2256401) /locus_tag="lmo2173" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sigma-54-dependent transcriptional regulator" /protein_id="NP_465697.1" /db_xref="GeneID:984670" /translation="MFDLMDNLLGVQSFGELNKDMPTTLFVTDADGNILISNKFTALT VGMSLEELLRCNVRDLVEDGVYNDSVTLEAIRTKQKKTKVINTKKGFSIRSTSTPILY PDGTVHLVVTMSDETQPDSFKTWRGEAISGNKESLLLEDYKENDGTVIVAESVAMKQI VRVCNQIAPFDSKVLLYGESGTGKEVLSRYIHEKSKQAAGPFISINCAAIPKALFESE LFGHEKGSFTGADIEKPGMLELADGGTLFLDEISEMPLELQAKMLRVLETGEVRRLGS TTETKRRFRLISATNRNLGEMVEKGTFRRDLYYRINVVPVHIPALRERPQDIIGLARQ FIQKFNQKYQKDFQLSGDKTKELLSHNWPGNVRELRNKIERLVVMSGNKEVTVAETDD FALDLHFKEQTKKDSLYLKDYLQGVEKHFILRVLEESNGNVTKAASTLGIHRSVLYRK LKTLH" misc_feature complement(2255037..2256329) /locus_tag="lmo2173" /note="RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms]; Region: RocR; COG3829" /db_xref="CDD:443041" regulatory complement(2256410..2256415) /regulatory_class="ribosome_binding_site" gene complement(2256507..2257580) /locus_tag="lmo2174" /db_xref="GeneID:986302" CDS complement(2256507..2257580) /locus_tag="lmo2174" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465698.1" /db_xref="GeneID:986302" /translation="MVEQLVSNAAILLAGFYIISLVYKEPITKELSTNKKIVIGIWAG LLGFALMVFGIPISNNVIVDLRHIPIIMVGFYGGPIPAIVSAIIISASRFLLSVNSAA IMAAVVMMLIGIITAIFGKRIEKFKIWGVFILNIIACSFVVINLHLILARESHFWINM TVFVLIALVIGAVSAGLMSNMIKSKQLFQKYEQDSTLDYLTKLSNVRQFDEKINHVMD AGSRQVTLMLIDIDYFKNINDTYGHDAGDAILKQLAIILKRNTSDGSEAFRNGGEEFS IVLLDCPIEKGNFFAEQVRRETEEYDFMIPSGQVVKITISVGVSSSKDGANTSEGLFK SADEALYKAKLTGRNQVCIADGN" misc_feature complement(<2257134..>2257547) /locus_tag="lmo2174" /note="Uncharacterized membrane protein YfhO [Function unknown]; Region: YfhO; COG4485" /db_xref="CDD:443579" misc_feature complement(2256519..2257337) /locus_tag="lmo2174" /note="GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants [Signal transduction mechanisms]; Region: GGDEF; COG2199" /db_xref="CDD:441801" regulatory complement(2257585..2257590) /regulatory_class="ribosome_binding_site" regulatory complement(2257712..2257743) /regulatory_class="terminator" gene complement(2257754..2258515) /gene="fabG" /locus_tag="lmo2175" /db_xref="GeneID:984669" CDS complement(2257754..2258515) /gene="fabG" /locus_tag="lmo2175" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis" /codon_start=1 /transl_table=11 /product="3-ketoacyl-ACP reductase" /protein_id="NP_465699.1" /db_xref="GeneID:984669" /translation="MGKLNGKVAVVTGAASGMGQQIAILFAKEGAKVVVADLNLEAAQ KTVELVEKEHGTGLAVVANVTKQEDIENMINQAIEAFGTLDILVNNAGIMDNFVPAGE LTDELWDKVFAINTTGVMRATREALHIFEEKGQGVIVNIASAGGLFGSRAGAAYTASK HAVVGFTKNVGFQYANKNIRCNAIAPGAVNTNIGTTIYAPDEFGQERAMIGMGINPRA GDASEIAKVALFLASDDSSFVNGTVITADAGWTAY" misc_feature complement(2257760..2258512) /gene="fabG" /locus_tag="lmo2175" /note="3-ketoacyl-(acyl-carrier-protein) reductase; Provisional; Region: fabG; PRK05565" /db_xref="CDD:235506" regulatory complement(2258524..2258529) /regulatory_class="ribosome_binding_site" regulatory 2258682..2258687 /regulatory_class="ribosome_binding_site" gene 2258697..2259260 /locus_tag="lmo2176" /db_xref="GeneID:984665" CDS 2258697..2259260 /locus_tag="lmo2176" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="NP_465700.1" /db_xref="GeneID:984665" /translation="MDRRVKKTKKAFNQALFTLLDQKPFQQITITDIVTEADVNRGTF YKHYRDKEELLDSIIEEILMDLKSAYQDPYLHTSHFSIQTLTPSMIKIFDHVYHHQAF YRQVIKSTIRPSFQNQVCDVIRELILDDVASFPDSSEANLQLLATYQAHAIFGMIVFW AEEDFSHSPAYMSEQLLYIIHAKTQQV" misc_feature 2258700..2259167 /locus_tag="lmo2176" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" misc_feature 2258943..2259239 /locus_tag="lmo2176" /note="Transcriptional regulator C-terminal region; Region: TetR_C_8; pfam14278" /db_xref="CDD:464123" regulatory 2259353..2259358 /regulatory_class="ribosome_binding_site" gene 2259366..2259713 /locus_tag="lmo2177" /db_xref="GeneID:984664" CDS 2259366..2259713 /locus_tag="lmo2177" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465701.1" /db_xref="GeneID:984664" /translation="MNDHRILNALSYFSILFAPIIVPVLIWIFAKSEEVSHHAKVALL THIIPTIAGFLCFSSIFVTATTSGGLLANVSLFVTGSLFVFTLVAVVGLFIFNIVRGI QMLCEKTEEDIWI" misc_feature 2259384..2259638 /locus_tag="lmo2177" /note="Domain of unknown function (DUF4870); Region: DUF4870; cl45925" /db_xref="CDD:480266" regulatory 2259722..2259747 /regulatory_class="terminator" regulatory complement(2259722..2259747) /regulatory_class="terminator" gene complement(2259753..2264591) /locus_tag="lmo2178" /db_xref="GeneID:984662" CDS complement(2259753..2264591) /locus_tag="lmo2178" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan binding protein" /protein_id="NP_465702.1" /db_xref="GeneID:984662" /translation="MKNIRHWKKLVIAMVIGLLVFQNVSPVLATMTDDETANTTLKII KEDKDTKEKINGSTFEIKNKETSETSDLTISANGEATMDSLLPGDYLVKEKVAAKGYA LDEKEYSVTLTEKEEVITSVSAKVQEETTKEAATPVKKATQNANLKAAITDNIFNKVT LKDGNGDEINTSDRIQNGSGVVLNMNFAFSGKNYKAGDTFTTVLPDAFNFGNKNLSGN FLPSTEAEWSLDVTTRELTITFLKDGIQEGDYDVNISTAFKVFTSTEETIQEVVFKTA GKDTIYQIEVVPVVNYPTTVAITANPGVVNPTKGQVDAKFNLTKEKDAKGELKLTDYT SGGTTTIDKDSIKVYSSDVSAGGTFIGTKKLLVEGTDYTLTYSATSLTVTLNGGLAGK GYQVTYDRTINKPSDSLSYMSTQAYTVGDAGTLSSNSAYVYLTMTNYKHLEKKATYNG STQSIDWKINFNFDQDEISPSTVLTDVLADNDVEYVADSLKIKRVTFNATNGSPIVGS DASSDWTTSAISANGNFNLTYKNTNTNAYEITYSTKITDFSDRKIKNEITDENGVSAD ATIAIQPDLLKKEAGTIDYFNNTMTWKITANSDRIKMGNLNITDEFSTGVKALKSYTV RAYTDNTNSVLLTEGKDYTIDKDVTPAGFYIQLIGDYASTDKKIVVDFVTDIDLSDVT KTIDNKASISYYDGGIIKYVDEVTASMTPDPGMMTNGGKYGSYNSTTGNIDWIVSVNA MAKNYDNLIFDDAIPTGLTYVEGSLQYRNVASTSEMMNLYIPLNSVGTVAKTGDKNYP TKVDTTGNKLHLEFANLENSRVFIKYSTKPNENWYFYSYVQNTAKVSDNGVGEKSYSY QAYASKLFNAMTKTATIDPSFDNKVNWIVTLNNISADRPINNPTITDTMKTGTTGAQV VKSSFKVMNETTGEDIDSKYYDITYTDNNFTIQFKDYKATAPIKVTYSTISLMSGLVS NTATTASPDYGSLPMTYKSRTTSISPAFTIGSGSGTATIGSLEITKVDKKDNSKKLTG AKFQLYTLEGDKAGQEATTDSDGKIVMDGLQSGKYKLVETEAPTGYTISDEYKDGKEI TVTADIATSVTIENTEQTGSVVLLKEDSATKDAIAGAEFELQNADGTKVADNLVSNAD GKIEVTDLAPGDYQFVETKAPTGYVLDGAPTKFTVEFNQEAAVIVTKENTAKTGSVVL TKEDSVSKATLSGAEFELQNATGTKVKDNLTTNADGKLEVTDLAPGDYKFVETKAPTG YELDATPVTFTIEFNQATAVNVTKENVAKTGSVVLTKLDSKSRSNLAGAEFELQTKLG VSLKDKVVTEANGQLQIDNLAPGDYQLVETKAPTGYDLDATPVEFTIEFNQKAPIQVT KTNTMSTGSVVLTKTDGETKALLANATFKLVDEDNNVTENLTTDASGKLEITNLAPGD YQLIETKAPAGYELDTVPVDVKITFDQKETLQVTKTNLKTVVSGKVIAEFVDTKGNVL AEKEIHTGIVGDKYATKAKDIKGYKLTKQPTNKEGVFKETEQKVTFVYEKNKAPIVVN PDKPVTPVKPTKPVDPAKKPTVKTSLPSTGDESPYGIIFTGLFASFMGLFLLRKSKKI ND" misc_feature complement(2263533..>2264504) /locus_tag="lmo2178" /note="Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis]; Region: ClfA; COG4932" /db_xref="CDD:443959" misc_feature complement(2264244..2264447) /locus_tag="lmo2178" /note="Prealbumin-like fold domain; Region: SpaA; pfam17802" /db_xref="CDD:465513" misc_feature complement(2262945..2263268) /locus_tag="lmo2178" /note="Collagen binding domain; Region: Collagen_bind; pfam05737" /db_xref="CDD:283410" misc_feature complement(2259846..2261681) /locus_tag="lmo2178" /note="Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis]; Region: ClfA; COG4932" /db_xref="CDD:443959" regulatory complement(2264602..2264607) /regulatory_class="ribosome_binding_site" gene complement(2264772..2268230) /locus_tag="lmo2179" /db_xref="GeneID:984658" CDS complement(2264772..2268230) /locus_tag="lmo2179" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan binding protein" /protein_id="NP_465703.1" /db_xref="GeneID:984658" /translation="MNHLKKLVSILICTLLIVSLLPFSVWADSQERDGTDVEEITTKE KVTQETTSNETTSEPLKGTTVNKAINAKSFPTGNYSGDFSINSQKDVIESGQTVNYNI YLKITGPNTRYQNAKLVINLPKNGEFNQSLNELKIAGATPSYNKTTRQLVYTYQTLNS GVVDKVILKMTTKNGYTPNGTKLVVTGELSADNLSEKVTEQAETTVNATATTALSNDF TKVENSINNNPSQGDIGIWSFNLNIPKKSTGSLFMEEGKKIVIEYTLADKLDYLGVAG DTPEPTKVEGQKLTWEIAAPTYLEQEKANSLLNKTFQIRTFFQPTIPNFATVENKAVA TTNFVTLTDSIVDTSKASVSVSASDPATIPPTIGSVYAPAHRGPVDANWGIATVTGNP DIKVYDTAKLGFSLMLNSAMNDSPWYDFLYYDAYYNIDDNLNLDYFRSGDFYFKPNVN YPGWAQLKKSPKYNLLVKYDGDTDWTTLKEDVELSKMYSRKDLGIPDDKHVSKVWLHF TYAPAGMYAADLSFFTTVKEGYVGEVRNSTQINMYGADSQDYIHYYDDTNPWPEAWKN YAGDRTAQIIPQPTGKNKFVQGSVVFDDTDGNLINIGDNSISVNLESNKASISRLKGP FEAMVLLPSGVKMKNTEQNGFKVTVLNENYQNAGRQLLKVKWDKKTLLPAEKLTAKIN VSVAKDTPSNMTVEMFGFLQDTDFNVPEVSGTPTISDTKMEIDSNDINQNGNSEESRI TSGNHYILNTSNHLKISKKAKGNRDKEYSGLANATTNSIVSYQLSLENDSDEKIANMV LMDVLPSENDLGITDNSERGSKFNLALTKAVEVPKEWKDKVEVTYSTAKNPKRAGILD KHTIYPIGTEPLVDNTEATQADWLTASEVKDWSNIYSFKIELKEGIEWIPGKSMKIQF DLKTPKKNQIDKTLLKQQTKKEDRAAWNSFAVAVNNSQVIEPAQVGVALDDSVAPVTV QYVDQNHKQIASPETLTGAYGEKFTAKQKKINNYSLVKIPANVSGTFNEKAQTITFIY QKVTAGRIIVNYVDKNGEKIADSIVLNGKLNSSYTTSSKKISGYKLYQTPKNATGKFL NTSQTVTYVYERTSNLSISSSNKGTENVKKLAKLPHTGDSTTTNLWVIIGLFMLSGAF VIMKKR" misc_feature complement(2265138..2265320) /locus_tag="lmo2179" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature complement(2264934..2265116) /locus_tag="lmo2179" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature complement(2264775..2264891) /locus_tag="lmo2179" /note="LPXTG cell wall anchor motif; Region: Gram_pos_anchor; pfam00746" /db_xref="CDD:366278" regulatory complement(2268238..2268243) /regulatory_class="ribosome_binding_site" regulatory complement(2268380..2268417) /regulatory_class="terminator" gene complement(2268424..2268900) /locus_tag="lmo2180" /db_xref="GeneID:984657" CDS complement(2268424..2268900) /locus_tag="lmo2180" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465704.1" /db_xref="GeneID:984657" /translation="MKLYELTDNYLKVQEFLEENNTDAVKDTLDALTDSFHDKSENIV KIIKSLAADAEMAGIEAKRLLKRKQALENNVQNLKNYLQTEMERMEIRKINSTLFTIQ IQKNPPSVEIVEEALLKPFFLLQEPKIDKKRIAEILKSGEEVKGARLVESESIRIR" misc_feature complement(2268427..2268897) /locus_tag="lmo2180" /note="Siphovirus Gp157; Region: Sipho_Gp157; pfam05565" /db_xref="CDD:398934" regulatory complement(2268907..2268912) /regulatory_class="ribosome_binding_site" gene complement(2268961..2269701) /locus_tag="lmo2181" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984655" CDS complement(2268961..2269701) /locus_tag="lmo2181" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465705.1" /db_xref="GeneID:984655" /translation="MKIKSFLGKSLTLVVLGVFLFSGWKIGMELYENKHNQTILDDAK AVYTKDAATTNVNGEVRDELRDLQKLNKDMVGWLTIIDTEIDYPILQSKDNDYYLHHN YKNEKARAGSIFKDYRNTNEFLDKNTIIYGHNMKDGSMFADLRKYLDKDFLVAHPTFS YESGLTNYEVEIFAVYETTTDFYYIETEFPETTDFEDYLQKVKQQSVYTSNVKVSGKD RIITLSTCDTEKDYEKGRMVIQGKLVTK" misc_feature complement(2268985..2269686) /locus_tag="lmo2181" /note="sortase, SrtB family; Region: sortase_srtB; TIGR03064" /db_xref="CDD:211782" misc_feature complement(order(2268994..2268996,2269024..2269032, 2269309..2269311,2269351..2269353,2269414..2269419)) /locus_tag="lmo2181" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:320675" misc_feature complement(order(2268994..2268996,2269000..2269002, 2269030..2269032,2269036..2269038,2269309..2269311, 2269315..2269317,2269351..2269356)) /locus_tag="lmo2181" /note="putative active site [active]" /db_xref="CDD:320675" misc_feature complement(order(2268994..2268996,2269024..2269026, 2269303..2269305)) /locus_tag="lmo2181" /note="catalytic site [active]" /db_xref="CDD:320675" gene complement(2269705..2270484) /locus_tag="lmo2182" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984654" CDS complement(2269705..2270484) /locus_tag="lmo2182" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ferrichrome ABC transporter ATP-binding protein" /protein_id="NP_465706.1" /db_xref="GeneID:984654" /translation="MEVRDVNFSYNGTDAILKNVSFTIQKNKINTIVGPNGSGKSTLL EILARLLSPNSGDVLLEGKSIFEWKAKEFAQNVAIVHQSNVLPNELMVKELLYFGRLP YKNWRMTRTKEDDLAVERALMQTELTEKAEKFVDSLSGGERQRVFIATALVQDTPILL LDEPTTFLDMYFQLEILELVKRLNQEENLTIVMILHDLNQALMYSDHLIVMKNGEVVA KGEPEELLTTDLIAETYGVVADVLNDANNGKYIVPQRRKEF" misc_feature complement(2269726..2270484) /locus_tag="lmo2182" /note="ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component [Inorganic ion transport and metabolism, Coenzyme transport and metabolism]; Region: FepC; COG1120" /db_xref="CDD:440737" regulatory complement(2269710..2269715) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2182" gene complement(2270465..2271454) /locus_tag="lmo2183" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984509" CDS complement(2270465..2271454) /locus_tag="lmo2183" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ferrichrome ABC transporter permease" /protein_id="NP_465707.1" /db_xref="GeneID:984509" /translation="MTIKQKSSFGAVIVLLIGTILWAVQAGSLSMSIPAFLSGIFSGG NEMVDVVIDLRFPRIIIALLAGAALSVSGLLLQAVMRNPLADAGVIGISAGAKFFSFV IILFLPELYFWLPLFSFIGGALACFLVFLFSYRSDFNPLRFIIIGIAINAVFTGLSDA LSSQVALVSSQSASSAASLAMKKWSDVETLLIYVTIGLICALLLAKWCNVLGLENKMA RGFGVPVNKTRIWLALIAVLLASITTAVVGVIAFVGLLVPHIARKLVGGNYQILVPFS ILFGALLLLFADTIGRTLFQQMEIPASVIMLIIGGPFLIFLMRKGDFYGSKGR" misc_feature complement(2270492..2271388) /locus_tag="lmo2183" /note="ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]; Region: FepD; COG0609" /db_xref="CDD:440374" regulatory complement(2270491..2270496) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2183" gene complement(2271444..2272316) /locus_tag="lmo2184" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984651" CDS complement(2271444..2272316) /locus_tag="lmo2184" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ferrichrome ABC transporter substrate-binding protein" /protein_id="NP_465708.1" /db_xref="GeneID:984651" /translation="MRKMAVISLVLLLFLVGCGKEEAAQKPEQKTDKEPKIVATTVAI TEIMDKLDLPLVGIPSSSKKLPKRYADVKETGSPMGPDLEIIRMLKPDMVLSTKTLEA DLKSGFEGADLEADFLDFTSIASMQTEIKNLGAKFDRIEEATKLNKDLTSDIDQVKSN VAKKKKPTVLILMGVPGSYLVVTEHAYIGDLVKLAGGENVIKDQKVEYLASNTEYLQS ANPDIILRAAHGMPAEVVKMFDEEFKTNDIWKHFDAVKNNRVYDLDENLFGMTASLNA PEALKEMEKMLYDN" misc_feature complement(2271453..2272301) /locus_tag="lmo2184" /note="heme ABC transporter, heme-binding protein isdE; Region: IsdE; TIGR03659" /db_xref="CDD:274706" regulatory complement(2271463..2271468) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2184" regulatory complement(2272325..2272329) /regulatory_class="ribosome_binding_site" gene complement(2272403..2274112) /locus_tag="lmo2185" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984803" CDS complement(2272403..2274112) /locus_tag="lmo2185" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2185" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465709.1" /db_xref="GeneID:984803" /translation="MKKLWKKGLVAFLALTLIFQLIPGFASAADSRLKDGGEYQVQVN FYKDNTGKTTKESSEADKYIDHTATIKVENGQPYMYLTITNSTWWQTMAVSKNGTRPE KPAQADVYQDRYEDVQTVSTDAAKDTRVEKFKLSSLDDVIFSYMHIKVDAISYDHWYQ VDLTIDPSTFKVISEPAVTTPVTLSDGIYTIPFVAKKANDDSNSSMQNYFNNPAWLKV KNGKKMVAMTVNDNKTVTALKTTLAGTLQDVKVVSEDKDANTRIVEFEVEDLNQPLAA HVNYEAPFNGSVYKGQADFRYVFDTAKATAASSYPGSDETPPVVNPGETNPPVTKPDP GTTNPPVTTPPTTPSKPAVVDPKNLLNNHTYSIDFDVFKDGTTETSMMESYVMKPALI KVENNQPYVYLTLTNSSWIKTFQYKVNGVWKDMEVVSGDINKNTRTVKYPVKDGTANT DVKTHVLIEDMPGFSYDHEYTVQVKLNAATIKDITGKDVTLKEPVKKDILNTGNVASN NNAGPKLAKPDFDDTNSVQKTASKTEKNAKTNDSSSMVWYITLFGASFLYLAYRLKRK RLS" misc_feature complement(2273615..2274016) /locus_tag="lmo2185" /note="Iron Transport-associated domain; Region: NEAT; pfam05031" /db_xref="CDD:428269" misc_feature complement(order(2273630..2273632,2273636..2273638, 2273648..2273650,2273663..2273665,2273669..2273671, 2273849..2273851,2273924..2273926,2273933..2273938, 2273972..2273974)) /locus_tag="lmo2185" /note="heme-binding site [chemical binding]; other site" /db_xref="CDD:132993" misc_feature complement(<2272958..2273653) /locus_tag="lmo2185" /note="Heme-binding NEAT domain [Inorganic ion transport and metabolism]; Region: NEAT; COG5386" /db_xref="CDD:444149" misc_feature complement(2272664..2273029) /locus_tag="lmo2185" /note="NEAr Transporter domain; Region: NEAT; smart00725" /db_xref="CDD:214790" misc_feature complement(order(2272697..2272699,2272703..2272705, 2272715..2272717,2272730..2272732,2272745..2272747, 2272883..2272885,2272958..2272960,2272967..2272972, 2272994..2272996)) /locus_tag="lmo2185" /note="heme-binding site [chemical binding]; other site" /db_xref="CDD:132993" misc_feature complement(2272421..2272507) /locus_tag="lmo2185" /note="sortase B cell surface sorting signal; Region: srtB_target; TIGR03063" /db_xref="CDD:213766" regulatory complement(2274119..2274124) /regulatory_class="ribosome_binding_site" gene complement(2274127..2274750) /locus_tag="lmo2186" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984742" CDS complement(2274127..2274750) /locus_tag="lmo2186" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2186" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465710.1" /db_xref="GeneID:984742" /translation="MKKVLVFAAFIVLFSFSFLSTGLTAQAALKDGTYSVDYTVIQGD SDSASMANDYFDKPATVTVNGGKSTVSLQVNHSKWITGLWVEGNAVSVTSKNASSDTR KVSFPVSTLSNPVNAKIKVDIDDDDLNYHHEYQIKLRFDEGSAKALAGAVKSSDNNTT TPATKSDSSNKVTNPKSSDSSQMFLYGIIFVATGAGLILLKRRAIFK" misc_feature complement(2274136..2274750) /locus_tag="lmo2186" /note="heme uptake protein IsdC; Region: IsdC; TIGR03656" /db_xref="CDD:274705" regulatory complement(2274759..2274764) /regulatory_class="ribosome_binding_site" regulatory complement(2274918..2274943) /regulatory_class="terminator" gene complement(2274961..2275221) /locus_tag="lmo2187" /db_xref="GeneID:984649" CDS complement(2274961..2275221) /locus_tag="lmo2187" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2187" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465711.1" /db_xref="GeneID:984649" /translation="MEFEDERLLREVLLFARSVDTKINDMSLEVIDFGNLRDYTKNEV LLTLYWLEENGFLIRNNNIAEKRYTLTLKGELLYDRFSQIEE" misc_feature complement(2274973..2275221) /locus_tag="lmo2187" /note="Protein of unknown function (DUF3116); Region: DUF3116; pfam11313" /db_xref="CDD:402765" regulatory complement(2275229..2275234) /regulatory_class="ribosome_binding_site" gene 2275258..2275363 /locus_tag="lmos82" /db_xref="GeneID:18245166" misc_RNA 2275258..2275363 /locus_tag="lmos82" /product="rli61" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245166" regulatory complement(2275467..2275494) /regulatory_class="terminator" gene complement(2275520..2277325) /locus_tag="lmo2188" /db_xref="GeneID:984648" CDS complement(2275520..2277325) /locus_tag="lmo2188" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oligoendopeptidase" /protein_id="NP_465712.1" /db_xref="GeneID:984648" /translation="MSKTNALPLREEVPENLTWDLTTIYPNDEAWEKAFTDLQKITEE SDQFKGRLSESSQTLYEALQFRDKAYDLISNLYVYAHLKMDQDTANAKYQGLHSRAGS LVTKLMSALSYYDPEILAMDENVLKQFLDENKDLQLYDHLLEELNLSRPYILSEKEEA LLANAGEVLGSSSNTFNTLNNADMKFPTIKDENGEDIEITHGRFGKLLESNDPRVRRD AFHGVYSVYEGLKNTLASTLNGQVKKSNFYASTRGYTSAREAALSGNHIPETVYDSLL KSVNANASLLHRYVKLRKELLGLEELHMYDLYTPLSDDVNLEFTYEEAKELVLEALKP LGDEYQAILKEAFDSRWIDVMENKGKRSGAYSSGSYSTNPYILLNWQDNINNVYTLAH ELGHSVHSYYTRKNQPFVYGDYSIFLAEVASTTNENLLTDYLLKKYDDPKVRAYLLNH YLDGFKGTVFRQTQFAEFEHAIHQADQQGVALTADFLTETYFDINKKYYGEAMVYDAE IGYEWSRIPHFYMNYYVFQYATGFSAASALSAKILTEGQDAVTAYIDFLKAGSSDYPI DVLKKAGVDMATPNPVDDALKVFEQKLDELEELVK" misc_feature complement(2275538..2277217) /locus_tag="lmo2188" /note="Peptidase family M3B, oligopeptidase F (PepF); Region: M3B_PepF; cd09608" /db_xref="CDD:341071" misc_feature complement(order(2275742..2275744,2275754..2275756, 2275772..2275774,2276066..2276068,2276138..2276140, 2276147..2276152)) /locus_tag="lmo2188" /note="active site" /db_xref="CDD:341071" regulatory complement(2277334..2277338) /regulatory_class="ribosome_binding_site" gene complement(2277398..2278513) /locus_tag="lmo2189" /db_xref="GeneID:988007" CDS complement(2277398..2278513) /locus_tag="lmo2189" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein CoiA" /protein_id="NP_465713.1" /db_xref="GeneID:988007" /translation="MIIIFTARNNIGETFTITKMNVERIKQEERLFCKSCASPVMIKA GQIKIPHFAHEKTMKCAFASEGESEEHLAAKKQIMAWFCYQRIPVEIESYFPEINRQA DIFVNGKTVIEFQRSSISISEMIQRTMDYLSIGLEVHWILGQVVKKEKGRICLSAFQQ AFIQSDKKLGYHFWHYSAKREICTLYYHLTFEKGNRFFASEMKFSMKSPLREWNKKLA RIISRHAYIKRDREIERQKICFYYAKYKKHGQFMQKLFNAGYYLHYLPKEIGVDVEEQ FLVLTPAVEWQFDLWEKFFKGLEKGDTFSVESFLESFKSVVSQILTIWLSPNESLKLG KSYLSYLIGEGVLSTIPDNRYRVKRKMAFTNIRAAHI" misc_feature complement(2277431..2278513) /locus_tag="lmo2189" /note="Competence protein CoiA-like family; Region: CoiA; pfam06054" /db_xref="CDD:283666" regulatory complement(2278591..2278624) /regulatory_class="terminator" gene complement(2278639..2279292) /gene="mecA" /locus_tag="lmo2190" /db_xref="GeneID:984925" CDS complement(2278639..2279292) /gene="mecA" /locus_tag="lmo2190" /experiment="EXISTENCE:[PMID:19448609]" /note="enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence" /codon_start=1 /transl_table=11 /product="adaptor protein" /protein_id="NP_465714.1" /db_xref="GeneID:984925" /translation="MEIERINEDTIKFYISYLDLEERGFNQEDVWYDREKSEELFWDM MDELKYEEEFSPEGPLWIQVQALKHGLEVFVTKATIGGKGEDGFDVTLSSPDELAEEK IEKLLEENFNPVKKEALGEDDTLEFILEFRDFEDAISLSRATGLENLVTKLYSYQGKY YLNVEFPENKYDESNIDNAVSILLEYGLESNLTGYMLAEYGKVIFDVPALKQIRKHF" misc_feature complement(2278642..2279292) /gene="mecA" /locus_tag="lmo2190" /note="adaptor protein MecA; Region: PRK02315" /db_xref="CDD:235030" regulatory complement(2279302..2279307) /regulatory_class="ribosome_binding_site" regulatory complement(2279475..2279507) /regulatory_class="terminator" gene complement(2279524..2279919) /gene="spxA" /locus_tag="lmo2191" /db_xref="GeneID:988006" CDS complement(2279524..2279919) /gene="spxA" /locus_tag="lmo2191" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ArsC family transcriptional regulator" /protein_id="NP_465715.1" /db_xref="GeneID:988006" /translation="MVTLYTSPSCTSCRKARAWLEEHDIPYKERNIFSEPLSLDEIKE ILRMTEDGTDEIISTRSKTFQKLNVDLDSLPLQQLFELIQKNPGLLRRPIIIDEKRLQ VGYNEDEIRRFLPRRVRTYQLREAQKMVN" misc_feature complement(2279527..2279919) /gene="spxA" /locus_tag="lmo2191" /note="transcriptional regulator Spx; Reviewed; Region: spxA; PRK01655" /db_xref="CDD:179316" misc_feature complement(order(2279605..2279607,2279644..2279646, 2279746..2279748,2279890..2279892)) /gene="spxA" /locus_tag="lmo2191" /note="putative catalytic residues [active]" /db_xref="CDD:239330" misc_feature complement(order(2279881..2279883,2279890..2279892)) /gene="spxA" /locus_tag="lmo2191" /note="thiol/disulfide switch [active]" /db_xref="CDD:239330" regulatory complement(2279931..2279936) /regulatory_class="ribosome_binding_site" regulatory complement(2280202..2280229) /regulatory_class="terminator" gene complement(2280238..2281206) /locus_tag="lmo2192" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984647" CDS complement(2280238..2281206) /locus_tag="lmo2192" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptide ABC transporter ATP-binding protein" /protein_id="NP_465716.1" /db_xref="GeneID:984647" /translation="MTEQREKLLEIHNLKQYFNKGTASEVRAVDDISFDIYKGETLGL VGESGCGKSTTGRTIIRLYDATGGEVIYNGKDVHARKSRKEMLEFRRKMQMIFQDPYA SLNPRMKVKDIIAEGIRIHGLAKTPEETNKQVYDLLETVGLSKEHAGRYPHEFSGGQR QRIGIARALAVQPEFIIADEPISALDVSIQAQVVNLLRQLQKEKNLTYLFIAHDLSMV KYISDRIGVMYFGKLVELAPANDLYHAPLHPYTESLLSAIPLPDPNYERTRVRKTYDP TSHNYKDGDEIKMREIAPGHFVYCSEEEEVMYKEKHAKLTAEAAAK" misc_feature complement(2280307..2281197) /locus_tag="lmo2192" /note="ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]; Region: AppF; COG4608" /db_xref="CDD:443658" gene complement(2281203..2282279) /locus_tag="lmo2193" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984646" CDS complement(2281203..2282279) /locus_tag="lmo2193" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptide ABC transporter ATP-binding protein" /protein_id="NP_465717.1" /db_xref="GeneID:984646" /translation="MEKLLEVKDLNISFHTYAGEVKAIRGVNFDLYKGETLAIVGESG SGKSVTTKSIMRLLPEGNSEIKSGQILFNGMDIAKAHEKQMQKIRGKDIAMIFQDPMT SLNPTMTIGKQISEPLIKHQKISKHEAHKTALRLLQLVGIANAEERIKQYPHQFSGGM RQRVVIAISLACNPQILIADEPTTALDVTIQAQILDLMKDLQKKIDTSIIFITHDLGV VANVADRVAVMYGGKIVEIGTVDEIFYNPQHPYTWGLISSMPTLDTDDEELFVIPGTP PDLLHPPKGDAFAARNKYAMQIDLEEEPPLFKVSDTHYAATWLLHPDAPEVTPPDAVL RRQEQFAELHPGMQAVHAKGVEVE" misc_feature complement(2281305..2282270) /locus_tag="lmo2193" /note="ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism, Inorganic ion transport and metabolism]; Region: DppD; COG0444" /db_xref="CDD:440213" regulatory complement(2281216..2281221) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2193" regulatory complement(2282285..2282291) /regulatory_class="ribosome_binding_site" gene complement(2282297..2283331) /locus_tag="lmo2194" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984644" CDS complement(2282297..2283331) /locus_tag="lmo2194" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptide ABC transporter permease" /protein_id="NP_465718.1" /db_xref="GeneID:984644" /translation="MAEHKIAKERFQPAHILDAEAEKINRPSLTFLQDSWLRIRKNKA ALVSLIVLALVIIMAIVGPYLSQNLGPEHNINRQITENASLPPKVQGFENMPFWNGHQ SIGGEDVDIYKQNNIKEGTYYWLGSDTLGRDQFARIWAGTRVSLIIAVVAALCDLVIG VAYGLISGYVGGRVDNFMQRVLEVIGAIPNLVVVILMMLILEPGIVSIIIAIAMTSWI TMARVVRGQVLKLKNQEFVMASMTLGESTPKILIKHLIPNISGIIIINIMFSIPSAIF FEAFLSFIGLGLPAPAASLGVLVNDGYKTLQVLPYMILYPCIVLCIIMIAFNLIADGL RDAFDPKMRD" misc_feature complement(2282315..2283250) /locus_tag="lmo2194" /note="ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism]; Region: DppC; COG1173" /db_xref="CDD:440786" gene complement(2283331..2284260) /locus_tag="lmo2195" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984916" CDS complement(2283331..2284260) /locus_tag="lmo2195" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptide ABC transporter permease" /protein_id="NP_465719.1" /db_xref="GeneID:984916" /translation="MVKYTLKRVLYMLITLFIIASVTFVLMKFLPGTPYRNQEKLSDE QIHMMNEKYGLNDSIPVQYFNYMTGLVKGDLGVSFQLDNRPVSEILSALIGPSVQLAL EAMAFGVIFGILLGVIAAMYQNRWPDYTSTFIAILGKSVPSFVFATVLQYWLGAKLQI FPVAGWGTFADTILPAFALAMFPLATAARFMRTELIDVFASDYVLLAKAKGNSRTEVA VKHAIRNALIPLITVLGPLSVALMTGSLVIENIYSIPGIGSQFVSSIQTNDYPVIMGT TILFAVMLVFVILVVDILYGLIDPRIRVSGGRK" misc_feature complement(2283346..2284260) /locus_tag="lmo2195" /note="ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism]; Region: DppB; COG0601" /db_xref="CDD:440366" regulatory complement(2283341..2283346) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2195" regulatory complement(2284272..2284277) /regulatory_class="ribosome_binding_site" gene complement(2284539..2286215) /locus_tag="lmo2196" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984918" CDS complement(2284539..2286215) /locus_tag="lmo2196" /experiment="EXISTENCE:[PMID:19448609]" /note="peptide ABC transporter substrate-binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465720.1" /db_xref="GeneID:984918" /translation="MKKSKLFLTLGLTLLLSLVLVACGGGSDSKSDKKGSDSGKASGE QVLNLTESALIPSADSTKADDQVGLNVVNQTNEGLYALDKDGIPAIAGAAEEPKISDD KTVYTIKLREDAKWSNGDPVTANDYVYSWRRAVDPNTAATYSYLFDAIKNGGDIVAGK KKPEELGIKAVDDYTLEVTLSKPTAYINSLFAFPTFFPLNEKFVTEKGEKYAQNSDNM LFNGPFELKDWTGTNKKWTYVKNDKYWDKDKVKLKQINVQVVQDSGTGLNLYNTDKVD RTVLSADYAAQNKNNKDYVTVNDSSTFYIKFNQKRAGKDTVFANKNIRKAIALAIDKQ SYTDTVLKNGSKPANNLVPEGFTFDPGNKEDYTKESGKHLEYDVKEAQKAWKAGLKEL GVNEITVEFTSDDTENARKSSEFIQDQLQKNLDGLTVKLKNVPFKVRLQNDQNQDYDF SMSGWGPDYQDPSTFLDLFVTDGAQNRMSYSNKDYDKILNDASVTYAADDQKRWDEMV KAEKILLTDDVAIQPLYQRSTAYLQKDYIKNLQKNPFGPDYTYKETYLTK" misc_feature complement(2284548..2286083) /locus_tag="lmo2196" /note="The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold; Region: PBP2_OppA; cd08504" /db_xref="CDD:173869" misc_feature complement(order(2284635..2284637,2284842..2284856, 2284860..2284862,2284908..2284910,2285319..2285321, 2285379..2285381,2286009..2286011)) /locus_tag="lmo2196" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:173869" regulatory complement(2286224..2286229) /regulatory_class="ribosome_binding_site" regulatory 2286826..2286831 /regulatory_class="ribosome_binding_site" gene 2286839..2287183 /locus_tag="lmo2197" /db_xref="GeneID:984643" CDS 2286839..2287183 /locus_tag="lmo2197" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2197" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465721.1" /db_xref="GeneID:984643" /translation="MFLRITIYTLIQEAIIFGILLFGKNQTVSLSNYVDISFMVALIS LLIGLFVYIMRSGFLDRVHNGFRSISRKIKREEENEFSDMPLSELVGLQYAGILFSSI FVMLTSILCMFL" gene 2287226..2287453 /locus_tag="lmos83" /db_xref="GeneID:18245167" misc_RNA 2287226..2287453 /locus_tag="lmos83" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245167" regulatory 2287505..2287510 /regulatory_class="ribosome_binding_site" gene 2287518..2288513 /gene="trpS" /locus_tag="lmo2198" /db_xref="GeneID:984829" CDS 2287518..2288513 /gene="trpS" /locus_tag="lmo2198" /EC_number="6.1.1.2" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA" /codon_start=1 /transl_table=11 /product="tryptophanyl-tRNA synthetase" /protein_id="NP_465722.1" /db_xref="GeneID:984829" /translation="MKKVIFSGIQPSGQLTLGNYIGALKQFGQFQDEYECFYCIVDEH AITVPQDRLKLREQTRSLAALYLAVGLDPEKSTLFIQSEVAAHAQAAWILQCNVYIGE LERMTQFKDKSAGKAGVSAGLLTYPPLMAADILLYQTDLVPVGEDQKQHIELTRDLAE RFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSDANLKNAIFLLDPPATIRKKI KSAVTDSSGIIEYNKEEKPGVSNLLTIYSVITGETIASIEEKYVGKGYGDFKTDLAEL VVSELEPIQERYYAYLKSEELDTILDAGAEKAARVANKTLKKMENGVGLGRKRRK" misc_feature 2287521..2288501 /gene="trpS" /locus_tag="lmo2198" /note="tryptophanyl-tRNA synthetase; Reviewed; Region: PRK00927" /db_xref="CDD:234866" regulatory 2288524..2288554 /regulatory_class="terminator" regulatory complement(2288524..2288554) /regulatory_class="terminator" gene complement(2288571..2288987) /locus_tag="lmo2199" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984811" CDS complement(2288571..2288987) /locus_tag="lmo2199" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465723.1" /db_xref="GeneID:984811" /translation="MKKLYETTVINTGGRSGEVHSPDNVFYFDISAPTELGGDGGGGT NPEQLFAAGYGACFNSALELVLGKAGIEAKSTVTATVSLYSDPEDNGFKIGVVLEGTI EGQDKEKTEALLKKAHEVCPYSKATRGNIDVEIKVG" misc_feature complement(2288577..2288978) /locus_tag="lmo2199" /note="peroxiredoxin, Ohr subfamily; Region: organ_hyd_perox; TIGR03561" /db_xref="CDD:274649" gene complement(2288971..2289423) /locus_tag="lmo2200" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984642" CDS complement(2288971..2289423) /locus_tag="lmo2200" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="NP_465724.1" /db_xref="GeneID:984642" /translation="MDTNTRILEEQLCFSVYNASKQFTKLYREALEPFQLTYPQYIAL LVLWEVEEQTVSELGKRLALDSGTLTPMLKRMEHLGYVTRSRHPEDERRVYIRLTEKA IKIQPDVLKSVDNCLQLLDFAELDYTQLLTKIQSLTKQLGGIENEKII" misc_feature complement(2289022..2289423) /locus_tag="lmo2200" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" regulatory complement(2288996..2289001) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2200" regulatory complement(2289432..2289437) /regulatory_class="ribosome_binding_site" regulatory complement(2289505..2289531) /regulatory_class="terminator" gene complement(2289545..2290786) /locus_tag="lmo2201" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985883" CDS complement(2289545..2290786) /locus_tag="lmo2201" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="3-oxoacyl-ACP synthase" /protein_id="NP_465725.1" /db_xref="GeneID:985883" /translation="MDKRRVVVTGVGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPD DFPVKIAAELKDFDVEKYLEKKEARKMDRFTHYAIASAEMAVQDSGLVIDDSNANRVG VWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTT VTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETA CRPFDKDRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNG EGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISST KSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVPNEAREANVNVV ISNSFGFGGHNATLVFKRIED" misc_feature complement(2289560..2290741) /locus_tag="lmo2201" /note="beta-ketoacyl-acyl-carrier-protein synthase II; Region: fabF; TIGR03150" /db_xref="CDD:274452" misc_feature complement(order(2289581..2289583,2289587..2289589, 2289944..2289946,2289986..2290000,2290169..2290174, 2290181..2290186,2290247..2290249,2290256..2290261, 2290268..2290270,2290304..2290312,2290316..2290318, 2290322..2290324,2290340..2290342,2290352..2290354, 2290364..2290366,2290382..2290384,2290418..2290423, 2290427..2290429,2290439..2290444,2290463..2290465)) /locus_tag="lmo2201" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238430" misc_feature complement(order(2289767..2289769,2289878..2289880, 2290295..2290297)) /locus_tag="lmo2201" /note="active site" /db_xref="CDD:238430" regulatory complement(2290794..2290799) /regulatory_class="ribosome_binding_site" gene complement(2290989..2291927) /locus_tag="lmo2202" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984640" CDS complement(2290989..2291927) /locus_tag="lmo2202" /EC_number="2.3.1.41" /experiment="EXISTENCE:[PMID:19448609]" /note="FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs" /codon_start=1 /transl_table=11 /product="3-oxoacyl-ACP synthase" /protein_id="NP_465726.1" /db_xref="GeneID:984640" /translation="MNAGILGVGKYVPEKIVTNFDLEKIMDTSDEWIRTRTGIEERRI ARDDEYTHDLAYEAAKVAIKNAGLTPDDIDLFIVATVTQEATFPSVANIIQDRLGAKN AAGMDVEAACAGFTFGVVTAAQFIKTGAYKNIVVVGADKLSKITNWDDRTTAVLFGDG AGAVVMGPVSDDHGLLSFDLGSDGSGGKYLNLDENKKIYMNGREVFRFAVRQMGEASL RVLERAGLEKEDLDLLIPHQANIRIMEASRERLNLPEEKLMKTVHKYGNTSSSSIALA LVDAVEEGRIKDNDNVLLVGFGGGLTWGALIIRWGK" misc_feature complement(2290995..2291927) /locus_tag="lmo2202" /note="beta-ketoacyl-ACP synthase 3; Region: PRK09352" /db_xref="CDD:236475" regulatory complement(2291935..2291940) /regulatory_class="ribosome_binding_site" gene complement(2292047..2293174) /locus_tag="lmo2203" /db_xref="GeneID:984639" CDS complement(2292047..2293174) /locus_tag="lmo2203" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase" /protein_id="NP_465727.1" /db_xref="GeneID:984639" /translation="MDRKCQLIMKKKFTQILLASVIVSSTLVPFVQAEAAGTNQTTVS QAGMTLSQQQFIQSIANDAQDLQKEEKILTSVTLAQAILESNWGKSGLSTSANNLFGI KGSYEGSSVSMGTQEFSSGKAYHTQADFRKYPDKKASLVDHAQLFVNGVSGNANLYSA VIGETNYKEAAYAIQDAGYATDPAYAEKLISTIENYNLDQYDQIYDTVTSTENQLAYA EIKNASNETIWTKPYNTEGAEKTGSVKDYKNKSLRISQKAVTEKGTWYQLQDQGKTIG WVNSNAVEVFYTPKNETNVKLDKYITDSDQKIYAYPVEDNSKVVTNLNDYLGKELDID RRADVKNEYWYRIKSDDGKVIGWSKADGFAENNPNKALEVK" misc_feature complement(2292575..>2293081) /locus_tag="lmo2203" /note="Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility]; Region: FlgJ; COG1705" /db_xref="CDD:441311" misc_feature complement(2292317..2292559) /locus_tag="lmo2203" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature complement(2292086..2292316) /locus_tag="lmo2203" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" regulatory complement(2293186..2293190) /regulatory_class="ribosome_binding_site" regulatory 2293484..2293491 /regulatory_class="ribosome_binding_site" gene 2293497..2293685 /locus_tag="lmo2204" /db_xref="GeneID:986280" CDS 2293497..2293685 /locus_tag="lmo2204" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465728.1" /db_xref="GeneID:986280" /translation="MRYVVTVFWVFLLSLMAEFVLSSMLYVSFDMTRAIILTVGLSFF IILITFLMPKDSEVYDFK" misc_feature 2293497..2293664 /locus_tag="lmo2204" /note="Protein of unknown function (DUF2929); Region: DUF2929; pfam11151" /db_xref="CDD:431684" regulatory 2293742..2293766 /regulatory_class="terminator" regulatory complement(2293742..2293766) /regulatory_class="terminator" gene complement(2293775..2294464) /locus_tag="lmo2205" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986282" CDS complement(2293775..2294464) /locus_tag="lmo2205" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoglyceromutase" /protein_id="NP_465729.1" /db_xref="GeneID:986282" /translation="MKLVLIRHGQSEWNKLNLFTGWHDVDLSQEGVVEAMTAGKRIKE AGLEFDVAFTSVLTRAIKTLNYVLEESDQMWVPVHKSWRLNERHYGALQGLNKQETAE KYGADQVQKWRRSYDTLPPLLEENDERQAKNDRRYQLLDTHAIPSGENLKVTLERVIP YWMDTIAPEIKEGRRVVIAAHGNSLRALVKFLEGISDDEIMDLEIPTGVPLVYELNAD LKPVNKYYLDK" misc_feature complement(2293781..2294464) /locus_tag="lmo2205" /note="Phosphoglycerate mutase (BPG-dependent) [Carbohydrate transport and metabolism]; Region: GpmA; COG0588" /db_xref="CDD:440353" regulatory complement(2294471..2294476) /regulatory_class="ribosome_binding_site" gene complement(2294555..2297155) /gene="clpB" /locus_tag="lmo2206" /db_xref="GeneID:985416" CDS complement(2294555..2297155) /gene="clpB" /locus_tag="lmo2206" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Clp protease subunit B" /protein_id="NP_465730.1" /db_xref="GeneID:985416" /translation="MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESDF AKRVYDVAEVDTDALQKVIENTLEKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQQQL EDDFVSTEHLILAVMDQKSNPITAELKNQHKAKKQIKEAILKIRGGKRVTSQNAEENY EALTKYGRDLVAEVRSGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIV EGLAQRIVRKDVPEGLKDKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQIL LFIDEIHTIVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERR FQKVLVPEPTVEDTVSILRGLKERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKA IDLVDEACATIRVEIDSMPSELDEVTRKVMQLEIEEAALKEEKDPASERRLEILQREL ADYKEEANQMKSKWESEKNEISKIREVREQIDHLRHELEEAENNYDLNKAAELRHGRI PAVEKELLELEAENREKTAQEDRILQEEVTENEIAEIVGRWTGIPVTKLVEGEREKLL KLADVLHQKVIGQDDAVQLVSDAVLRARAGIKDPKRPIGSFIFLGPTGVGKTELAKAL AFNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYIGYEEGGQLTEAVRRNPYSIVLL DEIEKAHPDVFNILLQVLDDGRITDSQGRLIDFKNTVIIMTSNIGSNLLLERTEEGEI SPELESDVMQILQSEFKPEFLNRVDDIILFKPLTLADIKGIVEKLVEELQIRLADQEI TITISDDAKAFIAEEAYDPVYGARPLKRYIVRHVETPLAREIVSGKIMPHSSVEIDLA DKEFTFKVTE" misc_feature complement(2294573..2297155) /gene="clpB" /locus_tag="lmo2206" /note="ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]; Region: ClpA; COG0542" /db_xref="CDD:440308" regulatory complement(2297164..2297169) /regulatory_class="ribosome_binding_site" gene complement(2297304..2297981) /locus_tag="lmo2207" /db_xref="GeneID:984638" CDS complement(2297304..2297981) /locus_tag="lmo2207" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465731.1" /db_xref="GeneID:984638" /translation="MNEINHTSERVNTEKRTEKQIIMQKILNWFVFSLLLASIGAAIG SKLSPELYLPLVVLEVALLITAMVVRRSKTINKVVGYPVVLAFAFVTGLTLGPTLTYY FGAGQGAAVLMAFVTATVTFTTLAFIGAKMKKDLSFLSSALFAAIIILVIFSFVGVFL PLGSMLSTIISAGGTIIFSLYILYDFNQIMKRDVELADVPMLALNLYLDFLNLFMFLL RLFTGRD" misc_feature complement(2297319..2297927) /locus_tag="lmo2207" /note="Bacterial BAX inhibitor (BI)-1/YccA-like proteins; Region: BI-1-like_bacterial; cd10432" /db_xref="CDD:198414" regulatory complement(2297989..2297994) /regulatory_class="ribosome_binding_site" regulatory complement(2298073..2298091) /regulatory_class="terminator" gene complement(2298093..2298863) /locus_tag="lmo2208" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984636" CDS complement(2298093..2298863) /locus_tag="lmo2208" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465732.1" /db_xref="GeneID:984636" /translation="MKPRGICFFDMDGTLLNSESKVLDTSLQALDKLRENNVIPVIAT GRTLIEISHQMKITGIESAVMMNGQMAIFEGEKVYEDVIDAGLLEQLTEEAKSQNVEV CYYNDKRIGATASTPVVKAHYDFLGEPMPEVRPNMYKEETINMALLLLETGDDYFPER FPELQFVRNTPFSNDVLRKGGSKAVGISKLLEVMGYQDVPTYAFGDGMNDLEMFGAVD YAIAMENAVPLLKEKATFVTKDNNSDGIMLGLKQFDLI" misc_feature complement(2298102..2298848) /locus_tag="lmo2208" /note="phosphatase, similar to Bacteroides thetaiotaomicron VPI-5482 BT4131 hexose phosphate phosphatase; belongs to the haloacid dehalogenase-like superfamily; Region: HAD_HPP; cd07517" /db_xref="CDD:319819" misc_feature complement(order(2298234..2298239,2298246..2298251, 2298315..2298317,2298726..2298734,2298822..2298836)) /locus_tag="lmo2208" /note="active site" /db_xref="CDD:319819" regulatory complement(2298870..2298875) /regulatory_class="ribosome_binding_site" gene complement(2298927..2299712) /locus_tag="lmo2209" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984635" CDS complement(2298927..2299712) /locus_tag="lmo2209" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2209" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465733.1" /db_xref="GeneID:984635" /translation="MIRKLTVSDNEEVMALLKPEATQNLFIIGDIENFGYESDVQDLW GEFDSVGKLHALLLRFDTFFLPYSKDANFNAEAFSEIIATHDKYEVSGMSRVTKELEA FLPELAEKRQDTYFCECEHVNRIPVNQDVIVRTAVAEDVGPIIKMRKHIKEFGSRDEN EELIIRQIEKGVKRIYYIEQDQEVVAVAETSAENSFSAMITGVATSDEYRQRGFASTL LKKLCCDVLAEGKKPCLFYDNPVAGEIYHRLGFEHTGDFVMYK" misc_feature complement(2298930..2299166) /locus_tag="lmo2209" /note="Predicted acetyltransferase, GNAT family [General function prediction only]; Region: COG3393" /db_xref="CDD:442620" regulatory complement(2299720..2299725) /regulatory_class="ribosome_binding_site" regulatory complement(2299808..2299830) /regulatory_class="terminator" gene complement(2299833..2300177) /locus_tag="lmo2210" /db_xref="GeneID:984633" CDS complement(2299833..2300177) /locus_tag="lmo2210" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2210" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465734.1" /db_xref="GeneID:984633" /translation="MKNKAEKQRIATNLSLYMKINGYTHRTFALAVGISQNTLKALMI GKMRNENKFQKYISQITESLALEEKFFEQPKEAITAAPITFQDTNKMHLGDEKFNAIS LMLKIGEIHYES" regulatory complement(2300187..2300192) /regulatory_class="ribosome_binding_site" regulatory complement(2300299..2300323) /regulatory_class="terminator" gene complement(2300334..2301263) /gene="hemH" /locus_tag="lmo2211" /db_xref="GeneID:984632" CDS complement(2300334..2301263) /gene="hemH" /locus_tag="lmo2211" /EC_number="4.99.1.1" /experiment="EXISTENCE:[PMID:19448609]" /note="protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic" /codon_start=1 /transl_table=11 /product="ferrochelatase" /protein_id="NP_465735.1" /db_xref="GeneID:984632" /translation="MTKKVGLLVMAYGTPYKDEDIERYYTDIRHGHKPSEEMIADLRG RYHAIGGLSPLAKITEAQAYGLEKALNDSQDEVEFKAYIGLKHIEPFIEDAVEAMHKD GIEEAISIVLAPHYSSFSVEAYNKRAKEAADKLGGPRINAINDWYKQPKFIQMWADRI NETAKQIPADELLDTVLIVSAHSLPEKIKQHNDPYPNQLQETADFIFEKVVVPHYALG WQSEGKTGEPWLGPDVQDLTRELYGREKYKHFIYTPVGFVAEHLEVLYDNDYECKVVT DEVGAAYHRPPMPNSDPEFLEVLRTVVWEKYSN" misc_feature complement(2300337..2301263) /gene="hemH" /locus_tag="lmo2211" /note="ferrochelatase; Provisional; Region: PRK12435" /db_xref="CDD:183526" gene complement(2301260..2302321) /gene="hemE" /locus_tag="lmo2212" /db_xref="GeneID:984388" CDS complement(2301260..2302321) /gene="hemE" /locus_tag="lmo2212" /EC_number="4.1.1.37" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of coproporphyrinogen from uroporphyrinogen III" /codon_start=1 /transl_table=11 /product="uroporphyrinogen decarboxylase" /protein_id="NP_465736.1" /db_xref="GeneID:984388" /translation="MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKYS LFEITHQPEICAYVTKLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPI RSFQDVEKLTIFKPEIEVPYVLDTIKLLADDMLDVPLIGFAGAPFTLASYMIEGGPSK NYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRADYA EYIRPVIEMIVREVKAVHPTTPIIMQAVGASHLLEEWETMPLDVVGVDWRETITSARK KVPTKAIQGNLDPSTLLAPEKCLKEANRILQEGVLEPGYIFNLGHGVFPEVPPEMLKQ LTNYIHERSEILLKKDDIK" misc_feature complement(2301299..2302300) /gene="hemE" /locus_tag="lmo2212" /note="uroporphyrinogen decarboxylase; Region: hemE; TIGR01464" /db_xref="CDD:273640" misc_feature complement(order(2301359..2301361,2301590..2301592, 2301698..2301703,2301707..2301709,2301848..2301850, 2301866..2301868,2301896..2301898,2302037..2302039, 2302052..2302054,2302088..2302108,2302187..2302189, 2302202..2302204,2302214..2302216,2302229..2302246)) /gene="hemE" /locus_tag="lmo2212" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238368" misc_feature complement(order(2301359..2301361,2301701..2301703, 2301866..2301868,2302094..2302096,2302229..2302231, 2302241..2302243)) /gene="hemE" /locus_tag="lmo2212" /note="active site" /db_xref="CDD:238368" regulatory complement(2301271..2301276) /regulatory_class="ribosome_binding_site" /gene="hemE" /locus_tag="lmo2212" regulatory complement(2302329..2302334) /regulatory_class="ribosome_binding_site" regulatory 2302505..2302510 /regulatory_class="ribosome_binding_site" gene 2302518..2303021 /locus_tag="lmo2213" /db_xref="GeneID:984794" CDS 2302518..2303021 /locus_tag="lmo2213" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465737.1" /db_xref="GeneID:984794" /translation="MKKVFITTGTEHYLRQLMANYTGGNVTLLQNFSQSLLYQESTGE KLFQEGAEYRVLQSSGSIKGFGVVVFEYIHLRDEEIPIFLQMYQRASLHFSETPGLQS TKLTKAMNMNKFLIISFWDSEVFFHDWKKSPLSKEITNIMRKNNTQSGFSHEDIYHYP EFSHDAK" misc_feature 2302716..>2302931 /locus_tag="lmo2213" /note="Heme-degrading monooxygenase HmoA and related ABM domain proteins [Coenzyme transport and metabolism]; Region: HmoA; COG2329" /db_xref="CDD:441901" regulatory 2303028..2303054 /regulatory_class="terminator" regulatory complement(2303028..2303054) /regulatory_class="terminator" gene complement(2303060..2304283) /locus_tag="lmo2214" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985371" CDS complement(2303060..2304283) /locus_tag="lmo2214" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_465738.1" /db_xref="GeneID:985371" /translation="MKMIFDSKALWKERFSAYTTEVMRYLRYMFNDHLLFVLVIGLGA GIFYYAGWVKTLEPTFPVIPLMVILLTASIAVSPVATLLKKPDIVYLIVQEKAMDTYF SQAKIASFFMQLYVFVIVLGVCMPMYVEVTKVPYSQFFTLFIVLSMLKAWNIYFGWES MKFEEADTTWMFIRVILNAILIYIALIAAPYISIPLVLVVLAASYYWLRTKTAKVTLR WEYLVDKEEARMNRFYRLVNLFTDVPHLRGTVRRRSYLDFLYQPIPYAKRKTFAYLFS RTFIRTNEYAGLYIRLTVIAVILLVFVQGFYLSIIFSLLFLYLTGFQFIPMLKHYDAQ IMLRLYPINDRYRHRSFIHFLRILLLAQALLFSVIGIAQNGTIGGMIILGINLAFVVI FTFLYAPVRMKKMYE" misc_feature complement(2303075..2304271) /locus_tag="lmo2214" /note="Predicted ABC-type exoprotein transport system, permease component [Intracellular trafficking, secretion, and vesicular transport]; Region: EcsB; COG4473" /db_xref="CDD:443570" gene complement(2304267..2305019) /locus_tag="lmo2215" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984629" CDS complement(2304267..2305019) /locus_tag="lmo2215" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465739.1" /db_xref="GeneID:984629" /translation="MALVEVEHLTGGYTKRPVLKDISFAIEEKQIVGLIGLNGAGKST TIKHITGLMHPKQGTIKINNHQLVEDTETYRKQFSYIPETPVLYEELTLKEHLELTGM AYGISEEELHARMTPLLKEFRLEKKLNWFPAHFSKGMKQKVMIMSAFLIEPKLYIIDE PFVGLDPLGIQSLLNWMDEMRSKGASILMSTHILATAEKYCDTFIIIHQGEIRAEGTL KDLQTNFEMPGASLDEIYIQLTKEEEADEDDI" misc_feature complement(2304285..2305010) /locus_tag="lmo2215" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" regulatory complement(2304290..2304295) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2215" regulatory complement(2305027..2305032) /regulatory_class="ribosome_binding_site" regulatory 2305165..2305170 /regulatory_class="ribosome_binding_site" gene 2305180..2305602 /locus_tag="lmo2216" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984814" CDS 2305180..2305602 /locus_tag="lmo2216" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="histidine triad (HIT) protein" /protein_id="NP_465740.1" /db_xref="GeneID:984814" /translation="MDDCIFCKIVRGEIPSAKVYEDDEVYAFLDLGQVTEGHTLVIPK KHARNTFDLPDETAAELFRRVPKIARALKEALPIQGLNILNNNEEVAFQSVFHCHIHL IPRYSKSDDFGLKWKDNADWYTQERYQEIAELIAAKVD" misc_feature 2305183..2305590 /locus_tag="lmo2216" /note="Purine nucleoside phosphoramidase/Ap4A hydrolase, histidine triade (HIT) family [Nucleotide transport and metabolism, General function prediction only]; Region: HinT; COG0537" /db_xref="CDD:440303" regulatory 2305617..2305622 /regulatory_class="ribosome_binding_site" gene 2305632..2305994 /locus_tag="lmo2217" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984627" CDS 2305632..2305994 /locus_tag="lmo2217" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465741.1" /db_xref="GeneID:984627" /translation="MNKKSLIFGILAGGAIGAAASVLFAPKSGNELRKDIVAKSGEAS VILKELAYNANELIQSVQVLGTEGSTLLKDVSSDIMESVSKWNEEMEPEKKRLKDEIK DMQKTISDLEKTLKKDNK" misc_feature 2305695..2305958 /locus_tag="lmo2217" /note="Gas vesicle protein YhaH [General function prediction only]; Region: GvpP; COG4980" /db_xref="CDD:444004" regulatory 2306004..2306019 /regulatory_class="terminator" regulatory 2306161..2306166 /regulatory_class="ribosome_binding_site" gene 2306177..2306716 /locus_tag="lmo2218" /db_xref="GeneID:985873" CDS 2306177..2306716 /locus_tag="lmo2218" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2218" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465742.1" /db_xref="GeneID:985873" /translation="MRCLKSINTERRDEFNRLFLKGILVWLAAVCICFLTQHLIYPDQ LTNDYQLASFLGIILIYPIHKLLHILGCFKYREGTVIQWRIHFFFLPCIKLNIKRIIP KWHYIFSLILPFVIITTILVALMLFTPIGHSGMFLLLLSVHFGMSFSDFTHIKKLWKM PKNCFIESAERGFSVLISD" misc_feature 2306348..2306665 /locus_tag="lmo2218" /note="Putative zincin peptidase; Region: DUF3267; pfam11667" /db_xref="CDD:431992" regulatory 2306815..2306820 /regulatory_class="ribosome_binding_site" gene 2306833..2307714 /locus_tag="lmo2219" /db_xref="GeneID:984626" CDS 2306833..2307714 /locus_tag="lmo2219" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="foldase" /protein_id="NP_465743.1" /db_xref="GeneID:984626" /translation="MKKKLILGLVMMMALFSLAACGGGGDVVKTDSGDVTKDELYDAM KDKYGSEFVQQLTFEKILGDKYKVSDEDVDKKFNEYKSQYGDQFSAVLTQSGLTEKSF KSQLKYNLLVQKATEANTDTSDKTLKKYYETWQPDITVSHILVADENKAKEVEQKLKD GEKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALKNKGDISAPVKTQYG YHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKDANVKVEDKDLKD AFKDFDGSSSSDSDSSK" misc_feature 2306833..2307681 /locus_tag="lmo2219" /note="peptidylprolyl isomerase; Provisional; Region: prsA; PRK04405" /db_xref="CDD:235295" regulatory 2307727..2307750 /regulatory_class="terminator" regulatory complement(2307727..2307750) /regulatory_class="terminator" gene complement(2307755..2308696) /locus_tag="lmo2220" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986701" CDS complement(2307755..2308696) /locus_tag="lmo2220" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates" /codon_start=1 /transl_table=11 /product="3'-5' exoribonuclease" /protein_id="NP_465744.1" /db_xref="GeneID:986701" /translation="MEKRLLDFEVGETVDLFLLIKSSVKGTASNGKPFLSLVLQDKSG ELEAKLWDVKESDEANYGVQQIVHLMGDIQNYRGRKQLKIRQIRQATALDGVSASEFM ETAPINKEEMADEITQYIFEMKNANLQRITRALLKKYQDDFYDYPAAMRHHHEFVSGL SFHVVSMLRLAKSVADLYPSVNRDLLYAGVILHDLGKVIELSGPVSTTYTLEGNLIGH ISIVVEEVSKIADELSIDGEEVVVLKHVLLSHHGKGEWGSPKPPLVREAEILHQIDLM DASLNMMDKVLKHTKPGEFSERVFGLDNRSFYNPTFE" misc_feature complement(2307758..2308696) /locus_tag="lmo2220" /note="3'-5' exoribonuclease YhaM; Provisional; Region: PRK13480" /db_xref="CDD:237394" regulatory complement(2308704..2308709) /regulatory_class="ribosome_binding_site" gene complement(2308741..2311464) /locus_tag="lmo2221" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984625" CDS complement(2308741..2311464) /locus_tag="lmo2221" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465745.1" /db_xref="GeneID:984625" /translation="MRITSIDIIGYGKWSDAHFNNIANFQVFYGENEAGKSTIMAFIH SILFGFPTKQQSIPRMEPKNGGPYGGRLTLEDTSFGKVIIERLKGKATGDVRIYYGDG QTAGEEKLPEIIGEIDRNTYEAIFSFDIHGLQNIHQWKKKEFERYLLATGTTGSDALL KTAETLQKKLDSLYKPSGRNPLINQQLKRVKEAQQAFQNAKKQNAQYEELINEKEQAT ARQAELQIEKTTKRVELDTLETLGDLWPLYQEWKALSNKASQKKEATFPPDGIIRLEH LQLREKEWQNQLIQLEERKKNLISNNDYEHSAFFAKNEAEITYLIETYAAFGEREIQL KNLKQEINFHQVDSKQTFRVWTSELEQTMARLKEKEQFHKEQQHEIQLKLKLTNDTEE KLQKKIDQIEMDMWDNRTFQQAKEKMQQKPKTFRTKTFVSFGVFAVALSLMIVFQSIW SVALVFVSALIVGYAIMTTWKALPTNNEQLLVFLEQKKIRQEWQQLLNEMDIIASQIA ELRATENKLNETIYQHTMELKQLFSDLGIKHNPDANWAYELAVYKKNSEKAQLAMELI SKLEPLAEKQEVYKARLANLELPGKYTDTEEKITFLRQGLLYYRNHLTENAKLAEKLE QVTMQLDLVKQDLLLIKKEKADLLASANAKNEEEFRMAAIRVKEEQNWRERLVLIEAQ LEPEKRIALNQYENQATIKEKELQLEETLRQIELEQEKIHASLAAQNHAIHKLEEGGT FAVLMQEFYSEKSKLQQIAAEWTETKLALQILQDTMQRLQEGKLPKTLKLASEYFNHL TNGNYDKVYLQDNRLQVESKNVVPFFPEELSQATKEQLYLAIRFALIDVIHKDFPLPI IIDDGFVHFDSARMGQMMQLLRKRKSENQVIFFTCHQETRKYFSSEDIRML" misc_feature complement(2308744..2311464) /locus_tag="lmo2221" /note="Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; Region: YhaN; COG4717" /db_xref="CDD:443752" misc_feature complement(2310877..2311464) /locus_tag="lmo2221" /note="AAA domain; Region: AAA_27; pfam13514" /db_xref="CDD:433272" gene complement(2311461..2312696) /locus_tag="lmo2222" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984624" CDS complement(2311461..2312696) /locus_tag="lmo2222" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465746.1" /db_xref="GeneID:984624" /translation="MKEIKFLHMADLHLDSPFIGLSTLPQPLFSAIQESTFQSLERIT TVAIKEAVDFVLIAGDIYDSEDQSVRAQARFAKEMKRLEVANIPVFMIHGNHDFIEKH KEKLALPSNVHVFSEQVEVMLHKTATGVSVNIYGFSYNERHIRSSRIDEYKVQGDADF HIALLHGSEVSSSEEHDVYAPFRVQEISKKGFDYWALGHIHKRQLLAESPSIYYPGNI QGRNRKESGEKGASIINLSEASTTIDFIGTSPIIWEEIIIPLPKNSEINAFYREITNV LESYQGRSHSYFLHIIIQMASSQKINTNDWLQMLQEEVELSNTTFVWVHKLTTEITNR SNLQTWYESHLAGEEIRRSFEQLQDESAFYQSVEALYLESGANRYLDDLSEQERERLL ENALMELGMTLAEVEGDEK" misc_feature complement(2311959..2312687) /locus_tag="lmo2222" /note="DNA repair exonuclease SbcCD nuclease subunit [Replication, recombination and repair]; Region: SbcD; COG0420" /db_xref="CDD:440189" regulatory complement(2311475..2311480) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2222" regulatory complement(2312705..2312710) /regulatory_class="ribosome_binding_site" regulatory complement(2312781..2312822) /regulatory_class="terminator" gene complement(2312839..2313192) /locus_tag="lmo2223" /db_xref="GeneID:987403" CDS complement(2312839..2313192) /locus_tag="lmo2223" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465747.1" /db_xref="GeneID:987403" /translation="MAVNIYDLAHDLDKGIRETPEFISLQDAYREVNENADAKAKFER FRDVQVTIQEKQMTGQEIDDETVDVAQQVAQEVQENELIVKLMEKEQAMSTIINDLNR IIMTPLQDLYNVAND" misc_feature complement(2312854..2313192) /locus_tag="lmo2223" /note="YlbF/YmcA family competence regulator; Region: PRK13676" /db_xref="CDD:237467" regulatory complement(2313201..2313206) /regulatory_class="ribosome_binding_site" gene complement(2313274..2314407) /locus_tag="lmo2224" /db_xref="GeneID:985253" CDS complement(2313274..2314407) /locus_tag="lmo2224" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465748.1" /db_xref="GeneID:985253" /translation="MSVLFTILLMAVIGGFIGAMTNYIAIRMLFRPYKAIYLFNKRLP FTPGLIPKRRDELAEHIGKVVVSHLLTEDAIRARLLDENLQKEITDTITKMFHEKMKL ETTPNELLHHFGYENAEIRSMAWIEKTLEKEINHFLSTKKTTKMSDLIPTMLESELTT KLPHVTERITSKMTLFVASEEGKIQIKQMLQKFFEEHGKMGSMARMFINIDSFSEKIQ QEGLKLIGQEDTKNLINQLLTTEWKNFEAKELQELIPTEKQAHLAGQLTSELIQTLPH EKLFNQPIQVILRGYEAAITEKVIPFAVERMLDFVATHSAEIVERMDLAKLVETQIAT FSLPEIEKLVVEISGRELKMITYLGGILGGFIGIIQGILAMWI" misc_feature complement(2313337..2314374) /locus_tag="lmo2224" /note="Protein of unknown function (DUF445); Region: DUF445; pfam04286" /db_xref="CDD:427840" regulatory complement(2314416..2314421) /regulatory_class="ribosome_binding_site" gene complement(2314511..2315878) /gene="fumC" /locus_tag="lmo2225" /db_xref="GeneID:987997" CDS complement(2314511..2315878) /gene="fumC" /locus_tag="lmo2225" /EC_number="4.2.1.2" /experiment="EXISTENCE:[PMID:19448609]" /note="class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle" /codon_start=1 /transl_table=11 /product="fumarate hydratase" /protein_id="NP_465749.1" /db_xref="GeneID:987997" /translation="MERIERDTLGEISVDATKYWGAQTERSKRNFAIGDNPMPIEIIY AFAQLKKATAKVNAAEGKLAEEKAIAIGQVCDQIIQGELDEHFPLVVWQTGSGTQSNM NVNEVIAHVANLTLGEGQIHPNDDVNMSQSSNDTFPTAMHIAAYGALVTKLLPEITKM EAVLTEKKNKYMHLVKIGRTHLQDATPLTLGQEISGWEACLTNNKNYLETSMKAILPL AIGGTAVGTGLNASRDFGDKVAEELMKQTGYPFTSDSNKYFALTSHSPINFVHGAIRS LASDLMKIANDIRLLASGPRSGIGELEIPANEPGSSIMPGKVNPTQCEAITMVAAQVM GNDVTINVAASQGNFELNVYKPVIIFNFLESIKLLADSMRSFRVHCLEGLTANEKVIE TKVNDSLMLVTALNPHIGYEKAAKIAKLAFDENTTLKEAAIKTGFVTEKEFDLWINPL KMTNL" misc_feature complement(2314517..2315872) /gene="fumC" /locus_tag="lmo2225" /note="fumarate hydratase; Reviewed; Region: fumC; PRK00485" /db_xref="CDD:234779" misc_feature complement(order(2314907..2314909,2314922..2314924, 2314928..2314930,2315336..2315338,2315477..2315485, 2315504..2315515,2315585..2315587,2315591..2315593)) /gene="fumC" /locus_tag="lmo2225" /note="active site" /db_xref="CDD:176465" misc_feature complement(order(2314670..2314672,2314829..2314837, 2314844..2314846,2314868..2314870,2315018..2315023, 2315030..2315035,2315039..2315044,2315051..2315056, 2315063..2315065,2315072..2315077,2315084..2315086, 2315090..2315095,2315102..2315104,2315111..2315116, 2315204..2315206,2315258..2315260,2315270..2315272, 2315282..2315284,2315300..2315305,2315321..2315323, 2315333..2315344)) /gene="fumC" /locus_tag="lmo2225" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:176465" regulatory complement(2315886..2315891) /regulatory_class="ribosome_binding_site" gene complement(2315948..2316742) /locus_tag="lmo2226" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985438" CDS complement(2315948..2316742) /locus_tag="lmo2226" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465750.1" /db_xref="GeneID:985438" /translation="MTHFNALLAKEWLEQRRSLKIIWLPIVFALLGLTQPLMMYFLPE ILKAVGTGAETEQVVALMGNQSAQEVMAQTLGSQFDQIGIIIIIVVAMACIQNDRTRG MLAFIMTRPVSAVEYVLSKWVMQCVVGLSSLLIGYVLAAYYTYFLFGELAINSLVEGF FVYAVWFIFVISLVVFASSIFDSNAVVAMISVFIAIVLGLISGLGGWIQIFNPAYLSK NATMLIMSGKTMDYFIPTILITAAWIILLVGLTVLMIKIKALPKTE" misc_feature complement(2316149..>2316478) /locus_tag="lmo2226" /note="ABC-type transport system involved in multi-copper enzyme maturation, permease component [Posttranslational modification, protein turnover, chaperones]; Region: NosY; COG1277" /db_xref="CDD:440888" gene complement(2316739..2317644) /locus_tag="lmo2227" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984938" CDS complement(2316739..2317644) /locus_tag="lmo2227" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465751.1" /db_xref="GeneID:984938" /translation="MKKLEIQGLKKKYNGKWVIKGIDLTINEKECVALIGPNGAGKST MINMIVQILTQDEGQITLDGESAKLVREKIGFLPQYPEFYGWMSATECLHFMGKLSNM EKTDLKARINEVLLLVGLEESANKKISTYSGGMRQRLGIAQAILHRPELLVLDEPVSA LDPIGRREMMLLLDKLKKEITILFSTHILKDAEEICDRIAIIKNGELVADKTVVQLME EESSPVFDVEFNGNSEAWQTLLLQNKYVEKIEKVGMVYQVYTTNQKAGSEAVLSSLLQ IDGEFIRVENRHQSLEEIFMEKVGK" misc_feature complement(2316988..2317635) /locus_tag="lmo2227" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" regulatory complement(2316750..2316755) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2227" gene complement(2317644..2317841) /locus_tag="lmo2228" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985739" CDS complement(2317644..2317841) /locus_tag="lmo2228" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465752.1" /db_xref="GeneID:985739" /translation="MDKTQIALIIPVILLYLALLLTAIIDLTKNWNTRKNPIIWLIVI IVINIFGPIAYFIFGRKEEVN" regulatory complement(2317652..2317657) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2228" regulatory complement(2317850..2317855) /regulatory_class="ribosome_binding_site" regulatory complement(2317909..2317943) /regulatory_class="terminator" gene complement(2317950..2320094) /locus_tag="lmo2229" /db_xref="GeneID:984619" CDS complement(2317950..2320094) /locus_tag="lmo2229" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="penicillin-binding protein" /protein_id="NP_465753.1" /db_xref="GeneID:984619" /translation="MDKFKQQLIKYLKLFFGFIGKWLNKGWQKFRRFWKNKHIGKIFL LAGLVFLLSFIIYLVIVAKSADIDALKKGLESATIIYDKDGDKAGELSSTDATFVSID KISKNLQNAVVSIEDRKFYEHKGFDLKGIARAGVNLVTSGGISGGGSTITQQLAKNAL LTQEQTFTRKAKEIFMAREIEKTYSKDEIMEMYLNRSYFGNGEWGVENASLKYFGKSA ADLNIPEAATIAGLLQAPSAYDPYQHIDKATNRRNMVLNAMVETGTISKAEGDKYKAT KIVLNDQSKDPLANKYPWYVDAVINEAVNEADITQDEIMQKGYKIYTELDQNYQTSLE NVYNNDGLFPSNANDGTLVQSGAVLMDPATGGIRALVGGRGEHVFRGFNRATQMKAQP GSTMKPLAVYTPALQSGYDVDSMLKDEKITYKGNYTPTNVGGVYSGEVPMYKAVANSI NAPAVWLLDQIGIDKGVKSVEKFGITVPEKDRTLGLALGGMSKGASPVEMATAYATFA NNGAKPESHIITKIVDPSGNTVYENVPKTKQIISETVSNEMTSMLLDVINTGTGQSAA VSGHEMAGKTGSTQVPFDDTSGTKDQWFVGYTPNLVGAVWMGYDKTDKEHYLTTTSSA GVSSLAHYVMNSGLQYQKSADFSTKSAAQETAAKKEEEEKEKNSGSDFWSGVKEKADE AGETIKKGADKVKEFGGKVSDGIGNLIDSIGN" misc_feature complement(2318175..2319812) /locus_tag="lmo2229" /note="penicillin-binding protein, 1A family; Region: PBP_1a_fam; TIGR02074" /db_xref="CDD:273955" regulatory complement(2320100..2320105) /regulatory_class="ribosome_binding_site" regulatory 2320400..2320406 /regulatory_class="ribosome_binding_site" gene 2320416..2320841 /locus_tag="lmo2230" /db_xref="GeneID:986212" CDS 2320416..2320841 /locus_tag="lmo2230" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="arsenate reductase" /protein_id="NP_465754.1" /db_xref="GeneID:986212" /translation="MTQKLIYFLSQTHIRSAIAEAWAKRLSLSNVKFISGSWHKSKST PFIAEALNEFAIEPPESLSYSPSSELLADADLIVTIYDSAHETAPKFPANIQEKIIYW DIDDPEQEIALPQKWASYQEVCDNIALSVKNLEHVLIEA" misc_feature 2320416..2320814 /locus_tag="lmo2230" /note="Low molecular weight phosphatase family; Region: LMWP; cl00105" /db_xref="CDD:469616" regulatory 2320850..2320872 /regulatory_class="terminator" regulatory 2320891..2320896 /regulatory_class="ribosome_binding_site" gene 2320906..2321775 /locus_tag="lmo2231" /db_xref="GeneID:984616" CDS 2320906..2321775 /locus_tag="lmo2231" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465755.1" /db_xref="GeneID:984616" /translation="MDGYNDLKKAEKAAFLSIFAYLFLAVLKIVAGQLGNSDALLADG LNNTTDIVASVALLIGLRISRIPPDADHSYGHRRTETISSLIASIIMFLVGVQVIWSS IVHIIEKEFATPSMLTAVVALFSGVFMYAIYLYNHQLAKKLDSQAVRAAAYDNRSDAF VSFGAFIGIIGAVLGVPWLDSVTAFLVGILIVYTAIKIFYDAAHTLTDGFDVSKLETI HDLIASVPDVKKVIDIKARMNGNRIWIDATIAVDPELNVVKSHEITEIVEQKIRNEYE GAFTLVHIEPFFE" misc_feature 2320933..2321763 /locus_tag="lmo2231" /note="Divalent metal cation (Fe/Co/Zn/Cd) efflux pump [Inorganic ion transport and metabolism]; Region: FieF; COG0053" /db_xref="CDD:439823" regulatory 2322021..2322026 /regulatory_class="ribosome_binding_site" gene 2322031..2323335 /locus_tag="lmo2232" /db_xref="GeneID:984442" CDS 2322031..2323335 /locus_tag="lmo2232" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465756.1" /db_xref="GeneID:984442" /translation="MILTIKFLIIALLIAISAFFVATEFAIVKMRPSRLDQLIAEKDK RAVLARHIYNHLNAYLSACQLGITISSLGLGWLGESTVEAALHPLFSLMELPQSAITI LSFTIAFLFITFLHVVVGELVPKTLAIDKTETVALAVARPLHIFYKVMFPFIWILNGS AVFIARLFGLEPASEHEIAHTEDELKIIVGESYKSGEINQSEFRYVNKIFDFDERMAK EVMIPRTEIVTVDTGSTIGELSDIMQNERYTRYPVIDGDKDHVIGVLNLKEILSAYVE HGSSPSFSIDPYVKPIIRVIETIPIKELLFRMQRERSHIAILLDEYGGTSGLVTVEDI VEEIVGDIRDEFDADEIPEIRKIKDGHYIVDAKLLIDEVNNILGTEIEEEEVDTIGGW FLTQNYEVEVGDEIDYDGFIFRVKQGEPHHIEYIEIIKKTND" misc_feature 2322031..2323332 /locus_tag="lmo2232" /note="Hemolysin-related protein, contains CBS domains, UPF0053 family [General function prediction only]; Region: TlyC; COG1253" /db_xref="CDD:440865" regulatory 2323343..2323370 /regulatory_class="terminator" gene complement(2323375..2324253) /locus_tag="lmo2233" /db_xref="GeneID:986617" CDS complement(2323375..2324253) /locus_tag="lmo2233" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="NP_465757.1" /db_xref="GeneID:986617" /translation="MNLHHLRYFVTLAHMEHYTKAAEKLLITQPSLSHAISSLEQELG IPLFEKEGRNIGLSKAGKVFLDYVEESLDMIDAGVATTKKAANGEGQIDLAFLQTLGT SLIPKLVQEFLQTEPEKQIDFIFHTGVSIDIIQGLKEKKFDIGICSKLENERNIHFTP IAKQELVLIVPKSHPLAEKDWIDLIETVDYPHIAFSKKSGLRPIIDELFRKIGADYQI AYEIEVDQVIAGMVAQNFGIAVVPNMPILNYVDVKVLPIRSPNWERFFYLAVAKNQTL TPAAEKFKQFMLAHRI" misc_feature complement(2324068..2324247) /locus_tag="lmo2233" /note="Bacterial regulatory helix-turn-helix protein, lysR family; Region: HTH_1; pfam00126" /db_xref="CDD:459683" misc_feature complement(2323393..2323983) /locus_tag="lmo2233" /note="The substrate binding domain of LysR-type transcriptional regulator GltC, which activates gltA expression of glutamate synthase operon, contains type 2 periplasmic binding fold; Region: PBP2_GltC_like; cd08434" /db_xref="CDD:176125" misc_feature complement(order(2323552..2323557,2323561..2323566, 2323582..2323599,2323873..2323893,2323903..2323905, 2323915..2323917,2323924..2323929,2323933..2323938)) /locus_tag="lmo2233" /note="putative dimerization interface [polypeptide binding]; other site" /db_xref="CDD:176125" regulatory complement(2324259..2324264) /regulatory_class="ribosome_binding_site" regulatory 2324540..2324545 /regulatory_class="ribosome_binding_site" gene 2324554..2325408 /locus_tag="lmo2234" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984614" CDS 2324554..2325408 /locus_tag="lmo2234" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465758.1" /db_xref="GeneID:984614" /translation="MTNANGNLKKCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLR AENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKEQTTFHMA RLFGVKHINCGLLEKIPEEQIIVALGELCDRAEELIIGLEFMPYSGVADLQAAWRVAE ACGRDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDR LAPGEGYGDTVGFAKILKEHGVNPRVMGVEVISDSMVATGLEYAALKVYNATKKVLDE AWPEISPR" misc_feature 2324587..2325375 /locus_tag="lmo2234" /note="Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism]; Region: YcjR; COG1082" /db_xref="CDD:440699" regulatory 2325462..2325467 /regulatory_class="ribosome_binding_site" gene 2325477..2327402 /locus_tag="lmo2235" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984612" CDS 2325477..2327402 /locus_tag="lmo2235" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="NADH oxidase" /protein_id="NP_465759.1" /db_xref="GeneID:984612" /translation="MKFNSMFSPIDIGPMKVPNRFVVSPMCNNYANTDGTLSDTSLAY YKERALGGFGLITFEATVVDVRAKGGANKACLYSDHQIASFKRVIDVCHDAGAKISVQ LQHAGPEGNSKVSGYPLRAASAIASAAGRNTPEAISREELYELIELYGEAALRAKKAG ADAVEVHCAHGYLVSSFLSARTNKRVDEFGGCFENRMRLPRLIIESIRKRVGHSIAIL CRINSTDGVDGGLSVQDSATVAAYLEDCGLDGLHVSRSVHIRDEYMWAPTVLHAGFSS DLVTQIKRAVSIPVITVGRFTEPHYAELMVREGRADLVAFGRQSLADPETPNKAAAGK LDELLPCIACLQGCVANMYAGKPITCLVNPLLGRESEAYLPKTPSKKVVVVGGGVGGL YAGWMAGSRGHDVTVYEASDMIGGQMRLAAYPPGKGDLTNMVRSYIKKCEQFDVEIKT NTPVTLELIQEVAPDAVIIATGATPLVLPIPGIEDAGLIHAVDLLDGKEKCGQKVLVV GGGMVGSETAAFLGEAGHDVTVVELRDEVGADVISEHRKFLMHDFDEYKIKSVTNAKV TSFFEDGVTYSLADNKEQRIDGFDSVVLAMGSRAYNPLEEAIKAIVPETYVIGDAVRA RRALDATKEALDAVLQL" misc_feature 2325495..2326475 /locus_tag="lmo2235" /note="Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a...; Region: OYE_like_FMN_family; cd02803" /db_xref="CDD:239201" misc_feature order(2325549..2325551,2325555..2325557,2325654..2325656, 2325780..2325782,2325990..2325992,2326134..2326136, 2326425..2326430) /locus_tag="lmo2235" /note="active site" /db_xref="CDD:239201" misc_feature order(2325549..2325551,2325555..2325557,2325654..2325656, 2325780..2325782,2326134..2326136,2326425..2326430) /locus_tag="lmo2235" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:239201" misc_feature order(2325984..2325986,2325990..2325992) /locus_tag="lmo2235" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:239201" misc_feature 2325990..2325992 /locus_tag="lmo2235" /note="putative catalytic residue [active]" /db_xref="CDD:239201" misc_feature <2326677..>2326961 /locus_tag="lmo2235" /note="NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; Region: GltD; COG0493" /db_xref="CDD:440259" misc_feature <2326854..2327336 /locus_tag="lmo2235" /note="Pyridine nucleotide-disulphide oxidoreductase; Region: Pyr_redox_2; cl39093" /db_xref="CDD:476868" regulatory 2327447..2327452 /regulatory_class="ribosome_binding_site" gene 2327461..2328330 /locus_tag="lmo2236" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984609" CDS 2327461..2328330 /locus_tag="lmo2236" /EC_number="1.1.1.25" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the conversion of shikimate to 3-dehydroshikimate" /codon_start=1 /transl_table=11 /product="shikimate 5-dehydrogenase" /protein_id="NP_465760.1" /db_xref="GeneID:984609" /translation="MENRISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAF DTPIQKVADTIKAIKTFNLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNEDGK LTGHITDGLGFIANLRDASVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKD AFYDKAKQTVASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHET PISDTSVFRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGK DMPVSEVKDLYFN" misc_feature 2327461..2328327 /locus_tag="lmo2236" /note="shikimate dehydrogenase; Region: PRK12548" /db_xref="CDD:183585" regulatory 2328349..2328354 /regulatory_class="ribosome_binding_site" gene 2328363..2329571 /locus_tag="lmo2237" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987939" CDS 2328363..2329571 /locus_tag="lmo2237" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MFS transporter permease" /protein_id="NP_465761.1" /db_xref="GeneID:987939" /translation="MNAKRFYPTAIALYFTYFIHGIGVSILGQYKQDFAGVWGADKLS DGTFDVSMVIAVIAALGLGRLLTLPISGPFSDKFGRKPSALIGVGLYAVYFIGLAFAP NMYIAYAFAFVGGAANSFLDTAVTPSVLEIFTKNGAIANMFTKFSISIGQFVLPFAIG MVAAANMSFRTLFVITMALIVIDGLIIAFMPFPPMNNNVGGEKAKPEKMKFNATSWAI IGIGFTCTSTFQLWLNCNQELGKLYGMADPSKIQSFYSLGTMCAILITAVLVKKFILP VRILILYPAIATLMLLIIYIVQTPTICLIGGFVIGYAAAGGVLQLAVSTANEFFPTNK GKITSIVMISSSLANYIVLNVASYITKAGGIEGPKYVLLFNVAITVIGILLAIFVNMR YKNESKIATK" misc_feature 2328387..2329544 /locus_tag="lmo2237" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" misc_feature order(2328420..2328425,2328432..2328437,2328444..2328446, 2328564..2328566,2328714..2328719,2328723..2328731, 2328738..2328740,2328795..2328797,2328804..2328809, 2328816..2328818,2329017..2329019,2329026..2329031, 2329038..2329046,2329053..2329055,2329137..2329139, 2329149..2329151,2329302..2329307,2329317..2329319, 2329329..2329331,2329377..2329379,2329386..2329391, 2329398..2329403,2329410..2329412) /locus_tag="lmo2237" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:349949" regulatory 2329718..2329723 /regulatory_class="ribosome_binding_site" gene 2329731..2330921 /locus_tag="lmo2238" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984611" CDS 2329731..2330921 /locus_tag="lmo2238" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MFS transporter" /protein_id="NP_465762.1" /db_xref="GeneID:984611" /translation="MKNKYLSTSLGLYMNYFVHGMALIIIAQNIDFLSQKWHTDLAGA AGVVSSFGIGKLLAVFISGRLSDKFGRKLSVILGVFFYIVFLGGILLSPNTIIAYMFG ISAGIANSFLDTGTYPALMEAYPKKAASANIIVKAFVQSGQFLLPFMIAFILANNLWY GWSFIVLIVILLINLLYTLTRTFPPMTVGKPLDVAELAEEKKQKFHFSIDEICLILFG FVAQTLLYIMSQWIAKYGSEVIHMTDDASRLLVSYASVGAIICVCVTFVLGNRGVRTL HILITYVTMTMLISFTLFAFPSEIVCIVGAFLLGYFSAGGIIQLGLTLLAEVSARGKG FVTSLYTIAEGIAVFIIPLIAAAISRIDIAAIFLLNAGIALFGLALLMIVFTRKKKFA RDHI" misc_feature 2329752..2330900 /locus_tag="lmo2238" /note="Inner membrane transport protein YdiM and similar proteins of the Major Facilitator Superfamily of transporters; Region: MFS_YdiM_like; cd17396" /db_xref="CDD:340954" misc_feature order(2329785..2329790,2329797..2329802,2329809..2329811, 2329905..2329907,2330055..2330060,2330064..2330072, 2330079..2330081,2330136..2330138,2330145..2330150, 2330157..2330159,2330373..2330375,2330382..2330387, 2330394..2330402,2330409..2330411,2330502..2330504, 2330514..2330516,2330667..2330672,2330682..2330684, 2330694..2330696,2330742..2330744,2330751..2330756, 2330763..2330768,2330775..2330777) /locus_tag="lmo2238" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340954" regulatory 2330925..2330954 /regulatory_class="terminator" regulatory complement(2330925..2330954) /regulatory_class="terminator" gene complement(2330959..2332023) /locus_tag="lmo2239" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984668" CDS complement(2330959..2332023) /locus_tag="lmo2239" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2239" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465763.1" /db_xref="GeneID:984668" /translation="MSTGLLWKEWRQNAWVFIFIVIAFIGSEATTATNTVSMFNDNYK YYQSEEFQKNNTADQQMTGNEIKNDLSLTPYDFEGNLGLFFYVFLFLGLKLTVFEKNK QMDYFTFGLPYSKKQIFWHKMLIPLLLIFVLVPIIIFCRFWYIYQQIPGLYLPSVSDS FMYISSFLLLYLFSYTLAMAVGNLVGEIITAGIIAIGSIVSFLYMFPGALTNLIIGFK AFFTGKTIVDIDGGAVMLYNAIPTPILQGTTALSEFGVLIILSIGMLTISWYAMKTAS LENNGRFLMNNKFRLPILIIGSLYVTICLSGHYASFNYDQLIPTGQVISLIIKIILIL VASVIAFWMLMYKWKTLRKH" gene complement(2332020..2332898) /locus_tag="lmo2240" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984621" CDS complement(2332020..2332898) /locus_tag="lmo2240" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465764.1" /db_xref="GeneID:984621" /translation="MKVDSLSKKIDGKLLLDKITFEVKPGEIIGIVGRNGVGKTTLFR TIMGFYIPDAGDVYLDEPLSKNHQLKQKLFMLQDNLNCWDGYKIPTIKKFYQKTYPLF DGDKFDNLMKQVNLAKDVKFQNYSKGMKGLFGLVLALSIGAEFILLDEPMEGLDIIAQ KKIMGILLEEVEKRKLGIIISSHRLADLDPIADYIHILQDNHIEESYHLESLREQAVK IQIAFENKKIPHFLLENGKVINKYGRVYTILFRDMNTELYAAIKKEKPIFMDELAVTL EDLFIYHLEEQGGEKL" misc_feature complement(2332251..2332892) /locus_tag="lmo2240" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" regulatory complement(2332033..2332038) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2240" gene complement(2332888..2333283) /locus_tag="lmo2241" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984595" CDS complement(2332888..2333283) /locus_tag="lmo2241" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="NP_465765.1" /db_xref="GeneID:984595" /translation="MFTINTKSQLPIYEQIVQKIKEQVVKGVLQEGEKILSIREFASR IGVNPNTVSKAYQELERQEVIITVKGKGTFIANQTDKLSSPKKLAETRTKLKETILDL VYLGVNIEEIHKLADEYSQDIIGGDVVEG" misc_feature complement(2332939..2333280) /locus_tag="lmo2241" /note="DNA-binding transcriptional regulator YhcF, GntR family [Transcription]; Region: YhcF; COG1725" /db_xref="CDD:441331" regulatory complement(2332907..2332912) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2241" regulatory complement(2333291..2333297) /regulatory_class="ribosome_binding_site" gene complement(2333375..2333857) /locus_tag="lmo2242" /db_xref="GeneID:985837" CDS complement(2333375..2333857) /locus_tag="lmo2242" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="O6-methylguanine-DNA methyltransferase" /protein_id="NP_465766.1" /db_xref="GeneID:985837" /translation="MTDLYYDTLHFSDTELYFAATKMGLVYVGTKAEKLQSAKRSPEK MNIYKEELAAYLHGELTNFTVPIDLSATPLQIEVFHALKTIPYGETRTYTEIAELINR PKAVRAVGTTIGRNPLLFIIPCHRVIGKNGNLTGYSGGIGMKESLLKLEKANLNQFSF " misc_feature complement(2333387..2333851) /locus_tag="lmo2242" /note="DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase) [Replication, recombination and repair]; Region: AdaB; COG0350" /db_xref="CDD:440119" regulatory complement(2333866..2333871) /regulatory_class="ribosome_binding_site" regulatory 2333989..2333994 /regulatory_class="ribosome_binding_site" gene 2334003..2334569 /locus_tag="lmo2243" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984592" CDS 2334003..2334569 /locus_tag="lmo2243" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="AraC family transcriptional regulator" /protein_id="NP_465767.1" /db_xref="GeneID:984592" /translation="MSDYYLTKKRWQAISTNDKTADGAFFYGVTSTKIFCYPSCKSRL PKKENIVIFHSAEEAFSHGYRACKRCKSGGSALPDTEWVNNIEMYIKENFAKALTLKI IADDCHGSPYHLHRTFKRITMITPITYLENVRINYAKMQLTTTNQSIETIGKMAGFPN PSHFSTTFKRHTGLSPNQFRKTIIKKLN" misc_feature 2334003..>2334545 /locus_tag="lmo2243" /note="Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains [Replication, recombination and repair]; Region: AdaA; COG2169" /db_xref="CDD:441772" regulatory 2334572..2334577 /regulatory_class="ribosome_binding_site" gene 2334586..2335455 /locus_tag="lmo2244" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984802" CDS 2334586..2335455 /locus_tag="lmo2244" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ribosomal large subunit pseudouridine synthase" /protein_id="NP_465768.1" /db_xref="GeneID:984802" /translation="MTHVTLPILEDWEGLSLTTILQEKFHLGKKARHEIRMSQNVLLN NKPLDDWNTPLFVGASLSLPIFLHDKIPVYEYDLEIIYEDDFLLVVNKPVDMKTHPND SYETDTCANAVQYYLEKTGQDANALAVHRLDQTTSGLVLFAKNKLAIAGLSWQMENRA IHRTYLAAVDGTWGLVMQTINKPIGEDRHHGSRRQISPYGQPAVTHVKVLENDNEKNT SLVECQIETGRTHQIRVHLSGIGHPIIGDTLYGGSPRANRIMLHAEKLHLNHPFKGKE MNFSAPAGDDWVF" misc_feature 2334823..2335446 /locus_tag="lmo2244" /note="Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific [Translation, ribosomal structure and biogenesis]; Region: RluA; COG0564" /db_xref="CDD:440330" gene complement(2335468..2335860) /locus_tag="lmo2245" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984591" CDS complement(2335468..2335860) /locus_tag="lmo2245" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465769.1" /db_xref="GeneID:984591" /translation="MLHHVEIYVADLEESRLFWSWLLEELSYEFYQSWNEGFSYKYAD TYLVFVQTEEPFISEGYHRKRVGLNHLAFHGGTKERVDDFRVKLKAKGIKLLYEERYP FAGGKNHYAVFFEDPNGIKVEICTEVTT" misc_feature complement(2335489..2335857) /locus_tag="lmo2245" /note="vicinal oxygen chelate (VOC) family; Region: VOC; cl14632" /db_xref="CDD:472697" gene complement(2335862..2336518) /locus_tag="lmo2246" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984843" CDS complement(2335862..2336518) /locus_tag="lmo2246" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465770.1" /db_xref="GeneID:984843" /translation="MTDIQTLFRTNRSLTDAPPMEAYMKNQFTFLGIRAGERKKLVAA YLKENGAPQDLLEFTIALFAEEEREFQYVAIDLLSRYGKKQPSEAIKVYEQLIVTKSW WDTVDGLAGTVVSNHFKLYPELIPTYNEAWINGDNIWLARTAILFQLKYKEKTDVDLL FFNCEKWLASKEFFIQKAIGWALRQYAKVDSGAVRQFVNSHSLAPLSRREALKHIGEA " misc_feature complement(2335874..2336470) /locus_tag="lmo2246" /note="A new structural DNA glycosylase containing HEAT-like repeats; Region: AlkD_like_1; cd07064" /db_xref="CDD:132881" misc_feature complement(order(2335976..2335978,2335997..2336002, 2336093..2336095,2336198..2336200,2336210..2336212, 2336450..2336452)) /locus_tag="lmo2246" /note="active site" /db_xref="CDD:132881" regulatory complement(2335867..2335872) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2246" gene complement(2336515..2337399) /locus_tag="lmo2247" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984590" CDS complement(2336515..2337399) /locus_tag="lmo2247" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_465771.1" /db_xref="GeneID:984590" /translation="MTKTLQDRMILPGNGTIPYIGLGVFQVTEQEFIAGAVEKAIEVG YRLFDTAAVYNNEAIVGQAIASSAVSREELFISSKVWNGDLGYDETLFAFERTLRNLK LDYLDLYLIHWPVAGKYRDSWRAMERLHDEKLIKSIGVANFKQHHLSDLLVAANEKPV LNQVETHPLLPQNDLRKYLVEQNIAHAAWSPLAKGILMQNPVITEIAKKHQASVDQVI LQWHLNRNTIIFPKSITSSRIEENSRLSYFQLDASDMEKIDRLETGKRVGPDPDDLEY FLSSIERERAYLASENEE" misc_feature complement(2336584..2337360) /locus_tag="lmo2247" /note="Aldo/keto reductase, related to diketogulonate reductase [Secondary metabolites biosynthesis, transport and catabolism]; Region: ARA1; COG0656" /db_xref="CDD:440421" regulatory complement(2336527..2336533) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2247" regulatory complement(2337408..2337413) /regulatory_class="ribosome_binding_site" regulatory 2337771..2337775 /regulatory_class="ribosome_binding_site" gene 2337786..2338406 /locus_tag="lmo2248" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984588" CDS 2337786..2338406 /locus_tag="lmo2248" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465772.1" /db_xref="GeneID:984588" /translation="MAFKNKKDRFASLLHDIAVNLHEGANFFATYNINSVEDLHTFSN KIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDALDETAFSLEICQ ITHYDEYMTKFIQAIQASTVEIEKAVDLVFDKKLKDVRKLAIQIKDYESQCDDVYRES LIQLFQNEKDPIKLIRLREVYEKLEDIADSCQSVANTLESIVMKNA" misc_feature 2337792..2338403 /locus_tag="lmo2248" /note="Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family [Inorganic ion transport and metabolism]; Region: YkaA; COG1392" /db_xref="CDD:441002" regulatory 2338406..2338411 /regulatory_class="ribosome_binding_site" gene 2338420..2339418 /locus_tag="lmo2249" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984840" CDS 2338420..2339418 /locus_tag="lmo2249" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="low-affinity inorganic phosphate transporter" /protein_id="NP_465773.1" /db_xref="GeneID:984840" /translation="MEGMFLITLVIVLAALAFDLINGFHDTANAIATSVSTKALKPRH AIILAAVMNFVGAISFTGVAKTITKDIVNPFDLDHGELVILAALLSAIAWNLITWYFG IPSSSSHALIGSIAGAAIASAGFAAIEYSGFTKIIIGLLVSPVLAFVVGYTIYSLFKV FLKNLNLATTNRRFRMIQVGTAALQSYTHGTNDAQKSMGIITMALIASGFQTTDDVQL WVQVSCAIAMAIGTSIGGWKIIKTVGGKIMKIKPVNGVAADLSSVIIIFGATFIHLPV STTHVISSSILGVGTAHRVKGVKWDTAQRMIITWVITLPISATIAALIFYVLRFIL" misc_feature 2338429..2339415 /locus_tag="lmo2249" /note="Phosphate/sulfate permease [Inorganic ion transport and metabolism]; Region: PitA; COG0306" /db_xref="CDD:440075" regulatory 2339428..2339449 /regulatory_class="terminator" regulatory 2339598..2339603 /regulatory_class="ribosome_binding_site" gene 2339611..2341071 /gene="arpJ" /locus_tag="lmo2250" /db_xref="GeneID:984583" CDS 2339611..2341071 /gene="arpJ" /locus_tag="lmo2250" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter permease" /protein_id="NP_465774.1" /db_xref="GeneID:984583" /translation="MQKHLLQKFAAILLVFIVVFSGFTSVFAADTEDQTLAKIQEKGV LTVGLSADYPPYEFHQTIDGKDKVVGFDVSIAEKIAKDLDVKLDIKEMNFDSLLGSLK TGKIDMIISGMSPTPERQKEVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQ KQTTQEELAQNELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAM ADIKFSNGSKETAIAMPKGSTALQEKVNASIKDIQDTGLLKEYQKEANKLMFQDGSFY EKYGNYFVTGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTP LLIQIFIVFFGTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARS LGMTQGASMRYIILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGAS FKPFIPLIITSLIYFVLTFSLSRLLGVAERRMRTSD" misc_feature 2339731..2340405 /gene="arpJ" /locus_tag="lmo2250" /note="Substrate binding domain of glutamate or arginine ABC transporter, a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_GltS; cd13620" /db_xref="CDD:270338" misc_feature order(2339758..2339760,2339767..2339769,2339779..2339781, 2339890..2339892,2339941..2339952,2339965..2339967, 2340088..2340090,2340097..2340105,2340214..2340216, 2340298..2340300) /gene="arpJ" /locus_tag="lmo2250" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:270338" misc_feature 2340415..2341068 /gene="arpJ" /locus_tag="lmo2250" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" regulatory 2341048..2341053 /regulatory_class="ribosome_binding_site" /gene="arpJ" /locus_tag="lmo2250" gene 2341064..2341789 /locus_tag="lmo2251" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984693" CDS 2341064..2341789 /locus_tag="lmo2251" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter ATP-binding protein" /protein_id="NP_465775.1" /db_xref="GeneID:984693" /translation="MINIKNLHKHFGKLEVLKGIDLEIASGEVVVVIGPSGSGKSTFL RCLNLLEQPTTGTILFENKDLMAKQTNVNELRQKMGMVFQNFNLFPHKNVLENLMLAP MKVKNEDSAAAKKHALSLLEKVGLADKATSYPSQLSGGQQQRVAIARALAMNPDVMLF DEPTSALDPEMVGEVLSVMKSLAKEGMTMVVVTHEMGFAREVADRVVFMDAGVIQEQG TPEEVFGNPQNDRTKDFLGKVLA" misc_feature 2341064..2341780 /locus_tag="lmo2251" /note="ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; Region: GlnQ; COG1126" /db_xref="CDD:440743" regulatory 2341847..2341852 /regulatory_class="ribosome_binding_site" gene 2341865..2343013 /locus_tag="lmo2252" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984582" CDS 2341865..2343013 /locus_tag="lmo2252" /EC_number="2.6.1.1" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate" /codon_start=1 /transl_table=11 /product="aspartate aminotransferase" /protein_id="NP_465776.1" /db_xref="GeneID:984582" /translation="MNHSKIAKKHQQMPVNILADIGTLAKTMPDILDLSIGDPDLITD ESIINAAFEDVRAGHTKYTESGGDVELIDAIRGYFSRNYDLSFERSQIRATVGALHGM YLTLQTILDDGDEVIIHEPYFSPYKDQVLNSGGTPIIIPTYEKDDFAINVDILEAAIT DKTKALILNSPNNPTGAVFSPETFEKIANLAKKYDFFILSDEVYDGFSFYEDFVPMAK FAPDHTITFGSMSKNFAMTGWRLGYMIAPTYLNEAAKIINEGITYSAPTPSQRAAIYA LNHSETLIPLVAETFQKRLEYIAKRVEKIPYLSLHPLKGSIYAFINISKTNMDSVSFT EYVLKETQVLVIPGLAFGESGDNYVRLAATQDISVLEEAFNRLAKLTF" misc_feature 2341865..2343010 /locus_tag="lmo2252" /note="pyridoxal phosphate-dependent aminotransferase; Region: PRK06348" /db_xref="CDD:180537" regulatory 2343020..2343050 /regulatory_class="terminator" gene complement(2343056..2343685) /locus_tag="lmo2253" /db_xref="GeneID:984901" CDS complement(2343056..2343685) /locus_tag="lmo2253" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoglucomutase" /protein_id="NP_465777.1" /db_xref="GeneID:984901" /translation="MKAVVFDFDGTMLDTENLWYTETMNYLKETYGIDLPDEVYQQII GTSEEPIIRYMMEATNGAFDKEAFLTTVAEACHLGQQSLGFRDGFKEFFEQVKANDYK IGLATSSGFDWIEPTLNRLGILADFETIQTADHVDEIKPHPALYLQAVEALGVKPEEA VAIEDSKNGALSAMQAGLKVYIVPNEATKNITFPKEATVVSSFAEINLK" misc_feature complement(2343059..2343679) /locus_tag="lmo2253" /note="uncharacterized subfamily of beta-phosphoglucomutase-like family, similar to uncharacterized Bacillus subtilis YhcW; Region: HAD_BPGM-like; cd16423" /db_xref="CDD:319859" misc_feature complement(order(2343179..2343184,2343191..2343196, 2343266..2343268,2343359..2343367,2343653..2343667)) /locus_tag="lmo2253" /note="active site" /db_xref="CDD:319859" regulatory complement(2343692..2343697) /regulatory_class="ribosome_binding_site" regulatory 2343841..2343846 /regulatory_class="ribosome_binding_site" gene 2343858..2345150 /locus_tag="lmo2254" /db_xref="GeneID:984903" CDS 2343858..2345150 /locus_tag="lmo2254" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465778.1" /db_xref="GeneID:984903" /translation="MFQLKANGTDVKTEVISGFTTFLTMVYIVVVNPAILSAAGVPFN TVFMATIISAVIGTLWMAIFANYPIAIAPGLGMNAYFVTVVTTQKLDYSVAFAAVFVA GIIFLLLSLTPLREKIIEAIPHNLKAGITAGIGLFIAFLGFRMTGIIVSNDSNLVGLG DLHSKEAILAIVGLLITLILLALNVKGALFIGMIATGIIAFITGELKFTDGIVKLPPM PEFVFTNPIHAFGDVMSYGLYAVVLSFLLITIFDTTGTMIGVAKKAGLMKGESLPNAK QALMADAVATSVGSMFGTTPTSAYIESSAGVATGGRTGLTTLTVAILFMVSAFFAPLV GAVSGISAITAPALIVVGSMMIGAVKEIDWDTLDEAFPAFLVILAMPLTSSIAIGLAF GFISYPVLKVFTGKWRELNWFLIVIAVLFFILVAFLPH" misc_feature 2343861..2345147 /locus_tag="lmo2254" /note="Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 (NCS2) family [Nucleotide transport and metabolism]; Region: NCS2; COG2252" /db_xref="CDD:441853" regulatory 2345160..2345185 /regulatory_class="terminator" gene 2345260..2345526 /locus_tag="lmo2255" /db_xref="GeneID:985217" CDS 2345260..2345526 /locus_tag="lmo2255" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2255" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465779.1" /db_xref="GeneID:985217" /translation="MFLKSLLAGVALAVVVFLASFLMPDYTVSTLYSIVTTIIVFASI ILSAFVSFGGRSGNPSRKSQLRWSILLLVAAIPSFIGFIVTFYF" regulatory 2345535..2345562 /regulatory_class="terminator" regulatory complement(2345538..2345559) /regulatory_class="terminator" gene complement(2345567..2346088) /locus_tag="lmo2256" /db_xref="GeneID:986867" CDS complement(2345567..2346088) /locus_tag="lmo2256" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465780.1" /db_xref="GeneID:986867" /translation="MTLKGKKVIALVSEDFEDLELWYPVLRLREAGASVHLVAEEAKK VYHGKYGVPVTSDYDFDSVRAEDYDGILVPGGWSPDKLRRFDSVLNLVRAFDKAKKPI GQICHAGWVLVSAGILEGVNVTSTPGIKDDMTNAGAIWHNEPVVTDGHIISSRRPPDL PEYLPAFISALED" misc_feature complement(2345579..2346070) /locus_tag="lmo2256" /note="A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus; Region: GATase1_PfpI_like; cd03134" /db_xref="CDD:153228" misc_feature complement(2345768..2345773) /locus_tag="lmo2256" /note="proposed catalytic triad [active]" /db_xref="CDD:153228" misc_feature complement(2345771..2345773) /locus_tag="lmo2256" /note="conserved cys residue [active]" /db_xref="CDD:153228" regulatory complement(2346097..2346102) /regulatory_class="ribosome_binding_site" gene complement(2346166..2346434) /locus_tag="lmos84" /db_xref="GeneID:18245168" misc_RNA complement(2346166..2346434) /locus_tag="lmos84" /product="LhrA" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245168" regulatory complement(2346175..2346200) /regulatory_class="terminator" /locus_tag="lmos84" gene complement(2346252..2346596) /locus_tag="lmo2257" /db_xref="GeneID:985845" CDS complement(2346252..2346596) /locus_tag="lmo2257" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465781.1" /db_xref="GeneID:985845" /translation="MKGTFNGFLFICNIVIFIQKTTIIVRQFSSFLSSSQKIYIYLLA FFKNNSKISYRIEFYLDESFIFTNVIFMGIRPYHGYNDFWCIHLPIEWQLVRHLFRHQ NHYLFSFISLAV" regulatory complement(2346572..2346591) /regulatory_class="terminator" /locus_tag="lmo2257" gene complement(2346593..2346784) /locus_tag="lmo2258" /db_xref="GeneID:984575" CDS complement(2346593..2346784) /locus_tag="lmo2258" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2258" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465782.1" /db_xref="GeneID:984575" /translation="MEERLYELEDKVQDLELEVHDLRDRIQLLEDKPDVRSSLLGHNV WVLIPLVAIISWMVVEIFS" regulatory complement(2346792..2346797) /regulatory_class="ribosome_binding_site" regulatory 2346924..2346929 /regulatory_class="ribosome_binding_site" gene 2346935..2347285 /locus_tag="lmo2259" /db_xref="GeneID:984570" CDS 2346935..2347285 /locus_tag="lmo2259" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS beta-glucoside transporter subunit IIA" /protein_id="NP_465783.1" /db_xref="GeneID:984570" /translation="MEIQVEEAVVKLILHGGNTRKEAYKAIDFAEKYQFDEADKHLQI AQDQFQEGHIWQTKLVSIRDSETVAHPSFLLIHGQDHLMTAQAELQLAKRIIEQYKHQ QRLEERLTKLENQA" misc_feature 2346947..2347237 /locus_tag="lmo2259" /note="PTS_IIA, PTS system, lactose/cellobiose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_lac; cd00215" /db_xref="CDD:238133" misc_feature order(2346947..2346949,2347109..2347111,2347157..2347162, 2347181..2347183) /locus_tag="lmo2259" /note="methionine cluster [active]" /db_xref="CDD:238133" misc_feature order(2346992..2346994,2347163..2347165,2347169..2347177) /locus_tag="lmo2259" /note="active site" /db_xref="CDD:238133" misc_feature 2347163..2347165 /locus_tag="lmo2259" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:238133" misc_feature 2347172..2347174 /locus_tag="lmo2259" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238133" gene complement(2347276..2348151) /locus_tag="lmo2260" /db_xref="GeneID:984702" CDS complement(2347276..2348151) /locus_tag="lmo2260" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465784.1" /db_xref="GeneID:984702" /translation="MNYEMISDYKDNKMYRDSFNRLAESTFDINFEEWYRDGFWNDKY ICYSYIDDNKVIANVSINKMNLIYQGEDYRALQIGTVMTHPDYRGQGLAKKLLEHVIA KYEDQYDFLYLFANDTVLDFYPKFGFERVEESSFTVDACSLKRESSNLKKLNPGNKTD FQLISRIVSEKTPLSNILDVRESEDLLMFYVLIALKNELYYIEELDVIVLMEQEDADL YVLDILSTKKLDVVEVLRYLPIKKIETIHLLFTPEKSKYIDAAHIIETEDMLFVRPNI LTNENYFLFPATSHA" misc_feature complement(2347741..2348103) /locus_tag="lmo2260" /note="Predicted N-acetyltransferase YhbS [General function prediction only]; Region: yhbS; COG3153" /db_xref="CDD:442387" regulatory complement(2348161..2348166) /regulatory_class="ribosome_binding_site" gene complement(2348231..2348539) /locus_tag="lmo2261" /db_xref="GeneID:987996" CDS complement(2348231..2348539) /locus_tag="lmo2261" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465785.1" /db_xref="GeneID:987996" /translation="MDEQLKENLMGALEQVIDPELGIDIVNIGLVYDVELDDDGLCTV SMTLTTMGCPLAGILTEQVQMALSDIPEVKDTNVNLVWNPPWTKDRMSRYAKIALGIR " misc_feature complement(2348243..2348536) /locus_tag="lmo2261" /note="Metal-sulfur cluster biosynthetic enzyme [Posttranslational modification, protein turnover, chaperones]; Region: PaaD; COG2151" /db_xref="CDD:441754" regulatory complement(2348550..2348555) /regulatory_class="ribosome_binding_site" gene complement(2348604..2349356) /locus_tag="lmo2262" /db_xref="GeneID:984566" CDS complement(2348604..2349356) /locus_tag="lmo2262" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465786.1" /db_xref="GeneID:984566" /translation="MIQVENEQIAGIPVLHISNSENADKMLPTIIFYHGFTSQKELYL HYGYLLAQRGFRVILPDAKLHGERLQGANPEDQATFFWDVIETNITEFPLITDELIKA GKTDANRIGVGGVSMGAITSLGLLGLYENIKVAVSLMGSAYYVDFAKELSKYALAQGL TFPFDVDERILALQKYDLTQNITKINNRPLLLWHGKKDDVVPFAYSEKLYQTLVEESL ADNVQFIIDDNAKHKVSVEGMLQGVSFFEKFL" misc_feature complement(2348607..2349356) /locus_tag="lmo2262" /note="A functionally diverse superfamily containing proteases, lipases, peroxidases, esterases, epoxide hydrolases and dehalogenases. The catalytic apparatus typically involves three residues (catalytic triad): a serine, a glutamate or aspartate and a...; Region: alpha/beta hydrolases; cl21494" /db_xref="CDD:473884" regulatory complement(2349364..2349369) /regulatory_class="ribosome_binding_site" regulatory 2349464..2349469 /regulatory_class="ribosome_binding_site" gene 2349475..2350320 /locus_tag="lmo2263" /db_xref="GeneID:984709" CDS 2349475..2350320 /locus_tag="lmo2263" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465787.1" /db_xref="GeneID:984709" /translation="MNQTYELKEQTMSKKLIVLDLDGTTLRDDLTISSHTKNTLEKAR MAGHEVMIATGRPYRISGSYYHELGLTTPIVNFNGAVYHHPRLTTFAEGYHHAIDLQV VHELLDFSNGFSLDNIAAEVQDNVFLKERNNSVPETFHLGTENIVFGNIRDAIKSDAT SLLFFGKLDQLDLISKHLDESLSGVISHHTWGASAWPAVEIIKFGIHKAIGVQAAAKT LGFDRKDIIAFGDETNDLQMLDYAGVGVAMGNAAESVKNVANVVTASNQDDGIAVYLE ENLNL" misc_feature 2349520..2350299 /locus_tag="lmo2263" /note="Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; Region: Cof-subfamily; TIGR00099" /db_xref="CDD:272905" gene complement(2350398..2351300) /locus_tag="lmo2264" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984563" CDS complement(2350398..2351300) /locus_tag="lmo2264" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465788.1" /db_xref="GeneID:984563" /translation="MSSKIVYKEYAKKTAIAIIAALLNAIGMNFFLIPAQVYAAGLNG VAQLGSDMLRDSMNISISTGLLVLLLNIPVAILGWLKVGKSFTVFSFLTVAFMSFFLI VIPEVQVSNDILLNAIFGALIASVGIGLALKFGISTGGLDIVAMYITIKTGRSFGKYF LLLNGVIIIVAGFAYDWTFALYTLISLYVQSRVIDIIHTRHQKLTVMIMTQHSETVIK AIHENMVRGITVVDAMGGYSKEDVAMLIMVITRYELYDITHIVGEFDSKAFINVMETS SVFGDFRSEADQKLAMAMYKNKMM" misc_feature complement(2350437..2351300) /locus_tag="lmo2264" /note="Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains [Function unknown]; Region: YitT; COG1284" /db_xref="CDD:440895" regulatory complement(2351308..2351313) /regulatory_class="ribosome_binding_site" gene complement(2351384..2351746) /locus_tag="lmo2265" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984574" CDS complement(2351384..2351746) /locus_tag="lmo2265" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465789.1" /db_xref="GeneID:984574" /translation="MWGYIHLISWVAIVVLTITALLIYSKSTKSFTMLQMINRVFYIL VILSGIMMVKYSIEQSWILAIFKILMGIIVIGVVEMLLSYRKQQKPTGMFLMIFVIVV VITISLGFYLSGGYPLFN" misc_feature complement(2351390..2351743) /locus_tag="lmo2265" /note="hypothetical protein; Provisional; Region: PRK13673" /db_xref="CDD:237465" regulatory complement(2351756..2351761) /regulatory_class="ribosome_binding_site" gene complement(2351767..2352615) /locus_tag="lmo2266" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984562" CDS complement(2351767..2352615) /locus_tag="lmo2266" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465790.1" /db_xref="GeneID:984562" /translation="MKWLSYLYEGDLAYGILTPENKIIPAGTIFSNPPATLLDFIKEK PLVPELTGIDGHIDLAEVEIQVPFVPPNNIIAIGKNYYNHVLEMGSKEDVPEHILVFT KSANSLLPHNGNIELHQNITGQLDYEGELAVIIGEKVRDISEQEALSAIFGFTILNDI TARDLQKKHKQFYLGKSLDASCPIGPFVLENNANKEPVFHIETKVNGEVRQSDSTDKF IFGLARIISDLSKGHTLLPGDIIATGTPSGVGNGMTPPTFLQDGDIIEITIDKIGTLT NKVRKS" misc_feature complement(2351776..2352411) /locus_tag="lmo2266" /note="2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport and catabolism]; Region: YcgM; COG0179" /db_xref="CDD:439949" gene complement(2352616..2356323) /locus_tag="lmo2267" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985303" CDS complement(2352616..2356323) /locus_tag="lmo2267" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP-dependent deoxyribonuclease subunit A" /protein_id="NP_465791.1" /db_xref="GeneID:985303" /translation="MSLNIPPKPEESLWTDDQWKAIQAKGNNVLVAAAAGSGKTAVLV TRIIEKLIDESANLNVDELLIVTFTNASAAEMKFRIGKGLEEALGQNPDSAHLKRQVA LLNYASISTLHSFCLEIIRKYYFEADIDPSFRLIEPIESSMIRDEVLEGLLEQEYGIE NNEAFFHLVESFTGDRSDAELHSLISKLYDFSRANPDPNAWLEAMVNFYNTEEITSIT ELPYFPIIKEDIELRVNQAKNYLLNAINYANENNGPAPYLATLENDLVQIQALSELNW SSWTHLKTSIENIDFKRIPTLKNKSDYDEVYVEEAKKFRDAAKKEMKNIATDWFSREE VNCLSDLEKMKPDIQTLSELVKKFSANFFEEKQQRGVLDFNDLEHLALKILLNDDKAS EVAQNYQKQFKEVLIDEYQDTNMVQETILRLVTNPSEAQGNLFMVGDVKQSIYRFRLA EPTLFMTKYQTFQQDGSGNGIRIDLSQNFRSRKEVLDATNFIFRQLMDKHIAEIDYDT AAELTLGANFPETNAMETELLLIDMKTEDTETEDELSPQELQKNQVESRAIAMKIREM IDNKFPIYDKKLKQNRPIQYRDIIILSRAMTSAPDMEEAMKVQDIPFYANNNSGYFET TEVATMIALMKVVDNPYQDIPLAAVLRSPIIGLNEEELGQIRMAKKKGYFYDALLTYK DITVSETANKISDFVQQLNNWRELSIRENLTSLIWQIYQETNFYEFVGGLPGGKQRQA NLRALYDRANQYEKTSFRGLFRFVRFVERLEIRGDDLGTAKTLGEKEDVVRMMTIHAS KGLEFPVVIVSGLSRKFNMRDIYSKTLLDKDYGFASSYRDVEKMIVYPTIMQQAIKQK KSREMIAEEMRVLYVALTRAEEKLILVATVPDFEKTSKNWLQVAKEKETILPAATRAK AKCYLDWIGNATIRHPAFKELLCEEIIQTLATEMKLQIEIKTKEMFLTNELERAESDN WLENIKEHQPVPIQSPYKDEIQRYMEYEYQNEAATEIRAKQSVTELKRQFSLQDSWSD TTLLKEFQKVSLDRPKFLQKNKLSATEIGTAMHTLMQAVSLDYKPTKEDLEQLLHTMR EKDILTDVQIKAINIKQILDFFESPLGETMLQKKDLVKREVPFSYLLPVSELYEKVDL DERVLIQGVVDSMIEEEETITLIDYKTDKIEGRYADWNAAEKVMKERYHIQIKLYAEA IQAISGKKVAAAYLYFFDGQHICQINTKEGL" misc_feature complement(2352646..2356284) /locus_tag="lmo2267" /note="exonuclease V subunit beta; Provisional; Region: recB; cl40735" /db_xref="CDD:477421" regulatory complement(2352624..2352629) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2267" gene complement(2356325..2359798) /gene="addB" /locus_tag="lmo2268" /db_xref="GeneID:984656" CDS complement(2356325..2359798) /gene="addB" /locus_tag="lmo2268" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP-dependent deoxyribonuclease subunit B" /protein_id="NP_465792.1" /db_xref="GeneID:984656" /translation="MTLQIIAGRSGTGKTTHLMDEVGEKIKQNSKTYIFIVPDQMTFQ METSFLNKENLAGMLGTQIFSFSRLAWKILQETGGLSKTFLSQTGIEMVIRKAALDQK DKLKIFSRATSRKGFYSELANLFKEMKQEEVSIEDMVKSATNLSTSVNNKVHDISLIY QKYEELLADKFLENEDYLRLLAEKIADSDYLNQTEIVIDGFTSFSKQELTVIGELMRK CDKVTISLTLNVPEIQHGLDEYSMFKASTEAYYALLELAKLNGTQVEENKFFLENKRA KTESLAFLANTWGHNKFMSFKNEPQNLKIHQANNRRAEIEGIAREIRQQALNGYRYRD IAILTRNLGDYDVLCETVMEAYNIPTFIDKKRAMAKHPFIEFIRSSLDAILFNWKYEP IFQAVKTEFFFDITEKSSLNRRKADILENYVLENGIQNKWKWEKEGDWIYRKIRGLST NVLPQTDEEIHMQSIINEMRNLIVNPLSTLELNLRKAKTGMEFALALYHYLEQVNAVE RLESWRQRAEEQGYLELAREHEQAWSSISALLDEFVEVLGEETLDLDSFTEIIGTGLD ALEFSLLPPSLDQVVLSDMENAKLLDMKVIFAIGMNDGVMPLRQKDKGIFSDQDRDAL RAEDSKLKPSAKNNIGEEDLLAYKIISLPSDKLFLSYPAADEEGKVLSESNYLRKIKG QFNELNESVYLTDPSLLSDAEQSSYIRSKQATLGLLTSQLQMYKRGYTLSSVWWDAYN SYFENEKESIMAKQVLSSLYYENKTKPLQETTAKNLFGETIHASVSRMEKFFSCEFQH YAQYGLKLEERGHFQLQAVDMGEIFHGAMEWISAELKRNNLDWGNLTEEECKQMAKLA MTFLAPKIQHEILLSSKRMEYIQYKLLQIITRATTVLNEQAKSSAFRPVGLEVDFGLK GDIPPLKIPLQSDSELLLQGRIDRIDMAEQDDRTFLRIIDYKSSSHDLALTEVYYGLA LQMLTYLDIVVTNAQKMIGKTAEPAGVLYFHMHNQYVQAEKELSDEAIAKELQKSSKM KGLILSDPVAVSLMDMTLEKGKASTIIPAEIKQNGELSARSRTATRAEFDKMRQFVRH KYQEAGNKILDGAVSINPYKLKERTPCQFCSFRSFCGFDPSLTSNQYRHLANEKAETI LTKMDIEGGTQ" misc_feature complement(2356328..2359798) /gene="addB" /locus_tag="lmo2268" /note="helicase-exonuclease AddAB, AddB subunit; Region: addB_Gpos; TIGR02773" /db_xref="CDD:213736" regulatory complement(2356331..2356336) /regulatory_class="ribosome_binding_site" /gene="addB" /locus_tag="lmo2268" regulatory complement(2359805..2359810) /regulatory_class="ribosome_binding_site" regulatory complement(2359911..2359934) /regulatory_class="terminator" gene complement(2359948..2360304) /locus_tag="lmo2269" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:988009" CDS complement(2359948..2360304) /locus_tag="lmo2269" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2269" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465793.2" /db_xref="GeneID:988009" /translation="MVICKSLDISKVVFSSCFLFFLGILQFFKIVINMSEGVVVVEMR DFSNSLMNQVGVLKGEKELTNVFIECFLTMLLEERKLEQLRAEIDKALDNRNKAEFMK LTEKMNKIQQEMLAFE" misc_feature complement(2359984..2360094) /locus_tag="lmo2269" /note="A short protein domain of unknown function; Region: IDEAL; smart00914" /db_xref="CDD:197982" regulatory complement(2360192..2360197) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2269" regulatory 2360421..2360426 /regulatory_class="ribosome_binding_site" gene 2360435..2360713 /gene="comK'" /locus_tag="lmo2270" /db_xref="GeneID:986337" CDS 2360435..2360713 /gene="comK'" /locus_tag="lmo2270" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein ComK" /protein_id="NP_465794.1" /db_xref="GeneID:986337" /translation="MKKEQISTQFYEVNPHTMIIFPKKSGSIVYSEIYEVDSHYTSKF TPFELIKTSCNFFGSSYEGRRINEIPKKNILSKGCLYFYYYIEETLFM" misc_feature 2360435..>2360629 /gene="comK'" /locus_tag="lmo2270" /note="ComK protein; Region: ComK; cl11560" /db_xref="CDD:472221" gene complement(2360908..2361141) /locus_tag="lmo2271" /db_xref="GeneID:985827" CDS complement(2360908..2361141) /locus_tag="lmo2271" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2271" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465795.1" /db_xref="GeneID:985827" /translation="MYNLIDDILEHSIVLADALKRNWSIEVLFLKNNHHVRYKYVVPV YIDNKKHIVSLERFDERIIDINIEDIIFCEVMT" regulatory complement(2361150..2361155) /regulatory_class="ribosome_binding_site" gene 2361274..2361423 /locus_tag="lmos85" /db_xref="GeneID:18245169" misc_RNA 2361274..2361423 /locus_tag="lmos85" /product="rli48" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245169" regulatory 2361567..2361572 /regulatory_class="ribosome_binding_site" gene 2361582..2361791 /locus_tag="lmo2272" /db_xref="GeneID:984555" CDS 2361582..2361791 /locus_tag="lmo2272" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2272" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465796.1" /db_xref="GeneID:984555" /translation="MTKKTTSDAQLKANKAWQDKNKEHANYLKSRSAARSFIKKKATL EDLEELEIAIKQRKTEIISLDNSPE" regulatory 2361776..2361808 /regulatory_class="terminator" regulatory 2361883..2361888 /regulatory_class="ribosome_binding_site" gene 2361897..2362274 /locus_tag="lmo2273" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985897" CDS 2361897..2362274 /locus_tag="lmo2273" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465797.1" /db_xref="GeneID:985897" /translation="MYNKAEIMKQAWNWFNDSNIWLSDIEWVSYTDKEKSFSVCLKAA WSKAKEEVEESKKESKHIAKSEELKAWNWAEIKLGLRFNISDDEKFTSVKDETKMNFD LNVWACAMKAVKLHNDLFPQTAA" misc_feature 2361900..2362256 /locus_tag="lmo2273" /note="anti-CRISPR protein AcrIIA3; Region: AcrIIA3_fam; NF033948" /db_xref="CDD:468260" regulatory 2362291..2362296 /regulatory_class="ribosome_binding_site" gene 2362306..2362656 /locus_tag="lmo2274" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985490" CDS 2362306..2362656 /locus_tag="lmo2274" /experiment="EXISTENCE:[PMID:19448609]" /note="protein gp29 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp29" /protein_id="NP_465798.1" /db_xref="GeneID:985490" /translation="MTLTTAQKRYYDAMNEFEAITSKELEQTPEFSQDLLNDSDYLAV TKNEAYAVALCLLDDDKLYLDETLVHSTRLDIEDETYYINFVVTNEDDFKLATDEDKE KHDKQEVIIKSGLN" misc_feature 2362312..2362650 /locus_tag="lmo2274" /note="Anti-CRISPR type II subtype A2; Region: AcrIIA2; cd22261" /db_xref="CDD:439330" misc_feature order(2362312..2362320,2362324..2362326,2362348..2362350, 2362357..2362359,2362375..2362377,2362381..2362383, 2362387..2362389,2362393..2362395,2362414..2362419, 2362465..2362473,2362498..2362500,2362522..2362524, 2362567..2362581) /locus_tag="lmo2274" /note="Cas9 binding site [polypeptide binding]; other site" /db_xref="CDD:439330" regulatory 2362646..2362650 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2274" gene 2362661..2363110 /locus_tag="lmo2275" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984548" CDS 2362661..2363110 /locus_tag="lmo2275" /experiment="EXISTENCE:[PMID:19448609]" /note="Portein gp28 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp28" /protein_id="NP_465799.1" /db_xref="GeneID:984548" /translation="MSIKLLDEFLKKHNKTRYQLSKLTGISQNTLKDQNEKPLNKYTV SILRSLSLISGLSVSDVLFELEDIEKNSDDLAGFKHLLDKYKLSFPAQEFELYCLIKE FESANIEVLPFTFNRFENEEHVNIEKDVCKALENAITVLKEKKNELL" misc_feature 2362673..2363107 /locus_tag="lmo2275" /note="Anti-CRISPR type II subtype A1; Region: AcrllA1; cd22282" /db_xref="CDD:439334" misc_feature order(2362727..2362732,2362775..2362780,2362784..2362795, 2362802..2362807,2362811..2362816,2362832..2362837, 2362844..2362846,2362865..2362867,2362949..2362951, 2362961..2362966,2362973..2362978,2362979..2362981, 2363093..2363095,2363102..2363107) /locus_tag="lmo2275" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:439334" regulatory 2363121..2363126 /regulatory_class="ribosome_binding_site" gene 2363135..2363632 /locus_tag="lmo2276" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984564" CDS 2363135..2363632 /locus_tag="lmo2276" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465800.1" /db_xref="GeneID:984564" /translation="MNNHVIDLTNKKFGRLTVKEFVRSENGNAVWECVCVCGNEKEVL AQHLKRGHVQSCGCLAKENGREYAEKNLRTETAQKNALKRKLEVDAVDGTMKSALTRR LSARNKSGIKGVRWDEKRNKWEASITFQKKLHFLGRFEKKDDAIKARRDAEDKYFKPI LDKMN" regulatory 2363643..2363664 /regulatory_class="terminator" gene complement(2363709..2364260) /locus_tag="lmo2277" /db_xref="GeneID:984920" CDS complement(2363709..2364260) /locus_tag="lmo2277" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2277" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465801.1" /db_xref="GeneID:984920" /translation="MDEASAEYRFELLTLLNDFTEKFHGKSIILTTKGIGQIVISLYD DNLPHLLGINKVVKRKTATAILTEIRNNKITLNSIMVHKDYEKISDRVKSYYFLHDVF IHKSIQICVKVNPIDNQGDYMKLDLVFYRKDRDKCIVLGAQKTRNNNTYRLCTLHVKK TTKEPYILSKRGKIVDIIISDTI" regulatory complement(2364269..2364274) /regulatory_class="ribosome_binding_site" gene 2364337..2364508 /locus_tag="lmos86" /db_xref="GeneID:18245170" misc_RNA 2364337..2364508 /locus_tag="lmos86" /product="rli62" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245170" regulatory complement(2364728..2364747) /regulatory_class="terminator" gene complement(2364754..2365599) /gene="lysA" /locus_tag="lmo2278" /db_xref="GeneID:984524" CDS complement(2364754..2365599) /gene="lysA" /locus_tag="lmo2278" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="L-alanoyl-D-glutamate peptidase" /protein_id="NP_465802.1" /db_xref="GeneID:984524" /translation="MTSYYYSRSLANVNKLADNTKAAARKLLDWSESNGIEVLIYETI RTKEQQAANVASGASQTMRSYHLVGQALDFVMAKGKTVDWGAYRSDKGKKFVAKAKSL GFEWGGDWSGFVDNPHLQFNFKGYGTDTFGKGASTSNSSKPSANANTNSLGLVDYMNL NKLDSSFANRKKLATSYGIKNYSGTATQNTTLLAKLKAGKPHTPASKNTYYTKNPRKV KTLVQCDLYNSVDFTEKHKTGGTYPPGTVFTISGMGKTKGGTPRLKTKSGYYLTANTK FVKKI" misc_feature complement(2365240..2365575) /gene="lysA" /locus_tag="lmo2278" /note="L-Ala-D-Glu peptidase, also known as L-alanyl-D-glutamate endopeptidase; Region: L-Ala-D-Glu_peptidase_like; cd14845" /db_xref="CDD:350620" misc_feature complement(2365000..>2365140) /gene="lysA" /locus_tag="lmo2278" /note="Domain of unknown function (DUF3597); Region: DUF3597; pfam12200" /db_xref="CDD:463490" misc_feature complement(2364766..2364972) /gene="lysA" /locus_tag="lmo2278" /note="Domain of unknown function (DUF5776); Region: DUF5776; pfam19087" /db_xref="CDD:465973" gene complement(2365599..2365880) /locus_tag="lmo2279" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984545" CDS complement(2365599..2365880) /locus_tag="lmo2279" /experiment="EXISTENCE:[PMID:19448609]" /note="holin [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="holin" /protein_id="NP_465803.1" /db_xref="GeneID:984545" /translation="MEFGKELLVYMTFLVVVTPVFVQAIKKTELVPPKWLPTVSILIG AILGALATFLDGSGSLATMIWAGALAGAGGTGLFEQFTNRSKKYGEDDK" misc_feature complement(2365605..2365880) /locus_tag="lmo2279" /note="Bacteriophage A118-like holin, Hol118; Region: Phage_holin_5_1; pfam06946" /db_xref="CDD:311099" regulatory complement(2365610..2365615) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2279" regulatory complement(2365887..2365892) /regulatory_class="ribosome_binding_site" gene complement(2365893..2366258) /locus_tag="lmo2280" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:988004" CDS complement(2365893..2366258) /locus_tag="lmo2280" /experiment="EXISTENCE:[PMID:19448609]" /note="protein gp23 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp23" /protein_id="NP_465804.1" /db_xref="GeneID:988004" /translation="MYDGLTKVFDYALAKEMFFAALFVALFIILLIITKRIWDDSKIV RIEMKEEREKVEEEREKRNKESKEERDKFISTMNEQQRLMDRQNDMMKQQQQSIDSLS KSVGKLAHKVDLLEHKITK" misc_feature complement(2365896..2366255) /locus_tag="lmo2280" /note="Protein gp23 (Bacteriophage A118); Region: Phage_Gp23; pfam10669" /db_xref="CDD:402347" regulatory complement(2366265..2366270) /regulatory_class="ribosome_binding_site" gene complement(2366288..2366446) /locus_tag="lmo2281" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984541" CDS complement(2366288..2366446) /locus_tag="lmo2281" /experiment="EXISTENCE:[PMID:19448609]" /note="protein gp22 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp22" /protein_id="NP_465805.1" /db_xref="GeneID:984541" /translation="MAYMIPIYVNLVMNNRKTIEEVPANLRGQVKAKVDELKQEQQQI QSEEIEAE" misc_feature complement(2366336..2366437) /locus_tag="lmo2281" /note="CD1375 family phage-related protein; Region: CD1375_fam; NF040910" /db_xref="CDD:468845" regulatory complement(2366289..2366303) /regulatory_class="terminator" /locus_tag="lmo2281" regulatory complement(2366384..2366398) /regulatory_class="terminator" /locus_tag="lmo2281" gene complement(2366451..2366768) /locus_tag="lmo2282" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984600" CDS complement(2366451..2366768) /locus_tag="lmo2282" /experiment="EXISTENCE:[PMID:19448609]" /note="protein gp21 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp21" /protein_id="NP_465806.1" /db_xref="GeneID:984600" /translation="MNYKQFYTYDENGDYLETILVFEDEKGLINQPKNSTNIEPSIIE NGIARAMYYPSWDGSIWKEDKKRWESENPIIPAEKTEIEKLREELLLTQEALAALFES NLG" regulatory complement(2366452..2366457) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2282" regulatory complement(2366776..2366781) /regulatory_class="ribosome_binding_site" gene complement(2366780..2367853) /locus_tag="lmo2283" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984481" CDS complement(2366780..2367853) /locus_tag="lmo2283" /experiment="EXISTENCE:[PMID:19448609]" /note="protein gp20 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp20" /protein_id="NP_465807.1" /db_xref="GeneID:984481" /translation="MTNQIFKSAILDFSVSAQNAKANVPQIRFSTQDSGGTARLKFTA KKDDNNLPLSSAAEVTLAMVLSVGKKYESSYIVNPEIINRTGGVFEYSLTDEQISHDG QANAELYVKYPNQTMQINRFSFVIEKAMIDDNFLPVATYYVEKWDDYEKIFNEKVEIL QNEIDDLQGQATELKNTFDSLNPDQFPQKADFENHINNTNIHVTMTDKTNWNTKENTA GSQAKADSALNSAKAYTDSKMDSYGAWINVPLAAGYSTGDSNTPQYRLVAKQTSTGLK TFAEFRGAIAGTFSSTANSTVGTMPAGTRTVVTEYFAVASNNGNGGRIAIPVDGKMLQ VSSTDNANPSYISLSGISYEVGN" misc_feature complement(2367389..2367826) /locus_tag="lmo2283" /note="BppU N-terminal domain; Region: BppU_N; pfam10651" /db_xref="CDD:431419" gene complement(2367853..2368881) /locus_tag="lmo2284" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986498" CDS complement(2367853..2368881) /locus_tag="lmo2284" /experiment="EXISTENCE:[PMID:19448609]" /note="Protein gp19 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp19" /protein_id="NP_465808.1" /db_xref="GeneID:986498" /translation="MLNLDKWGNTLFDSNKYQQFNANMEKLEKDSLAKDVDINATNNR IDNVVLEAGGNNITEVVDARTSKNGQVYSTLNSRLNGDYSAIASDLAESNALLQTVNE ENKVLKSKLDELYGNSASNIEYYVSSTNGNDVTGTGAIDAPFKTIQKAVNMVPKVKVG GFIYIFCEPGQYNEDVVVQSFSGAECFYIQPTNLATIDPTTGQTGFFVKSILFSGIMF QCVVQGLNSMSTAVNNNSTVIQFARCWYGTVTKCRFDTNLKATNITTVQYNQSRGNCY SNYFKNQNIIMSSEYMGHALFASTNTCEATSNVGLKAASGGILVKSGTPVLNATTAEL KQAGGQIF" regulatory complement(2367866..2367871) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2284" gene complement(2368882..2369907) /locus_tag="lmo2285" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987978" CDS complement(2368882..2369907) /locus_tag="lmo2285" /experiment="EXISTENCE:[PMID:19448609]" /note="Protein gp18 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp18" /protein_id="NP_465809.1" /db_xref="GeneID:987978" /translation="MNSDIIVADFWKNNEEILTDFDKDSFCESWTENEMWSIEFKVAQ TPKNAHCYSFLDYESSVYFRGQEFVVKQLSHDAVGKTLSKDIRAPHIYYTCQDGRQDD AITGSFTLEQCLTHIFKTDNRGFSWEIIDPSNILEKVQQENFGNNNYLTLIDQLLDDY GVVVIPDNRHLVFKPREIYGAKTENFIRYKYNTDEASFDIDTLSLKTKIKGYGKVDSN GNNYFSPITYTSPEVEKWGIRWQEPVSDERYTVAGNMQRRLKLELQDYPATTGSVILK NDYECEKGDYVLFIYEPLGIDYDVQIVAYKKYPFTIKAPEITLSNNKKSIVSIMAQLA KVLKGAK" misc_feature complement(2369638..2369895) /locus_tag="lmo2285" /note="Prophage endopeptidase tail N-terminal domain; Region: Prophage_tailD1; pfam18994" /db_xref="CDD:436896" misc_feature complement(2368909..2369634) /locus_tag="lmo2285" /note="Prophage endopeptidase tail; Region: Prophage_tail; pfam06605" /db_xref="CDD:429028" regulatory complement(2368889..2368894) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2285" regulatory complement(2369915..2369920) /regulatory_class="ribosome_binding_site" gene complement(2369916..2370734) /locus_tag="lmo2286" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986372" CDS complement(2369916..2370734) /locus_tag="lmo2286" /experiment="EXISTENCE:[PMID:19448609]" /note="Protein gp17 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp17" /protein_id="NP_465810.1" /db_xref="GeneID:986372" /translation="MATSLALVIEGKTYMLNELFDLEVGEVSREPPQIVNNYTEFAGS DGARTTDSNFSMFPISILCHFRTESADLYHVKLDELLELIYQRKEYFLVHSKTPGKKY RVHPSGVGIDRKAPGYADLTLEFDVFRGYSESLSSTLSDSEIDCDKWQFGQGLAMEDY RYTHTKSRFIIYNGGSFDIDPREHYLAITLRGQNEGELTINNITTGDRFIYYPSLSTT DTLIIDCATPRINGNPCGRNTNHGLISLKKGENLIEISNTSHLDTKWDFSFLYK" misc_feature complement(2369919..2370650) /locus_tag="lmo2286" /note="Phage tail protein; Region: Sipho_tail; pfam05709" /db_xref="CDD:428597" gene complement(2370736..2376099) /locus_tag="lmo2287" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984538" CDS complement(2370736..2376099) /locus_tag="lmo2287" /experiment="EXISTENCE:[PMID:19448609]" /note="tape-measure [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="tape-measure" /protein_id="NP_465811.1" /db_xref="GeneID:984538" /translation="MSDGSVVIEISLDDKKADKQLDAFEKDLAKAGTNAGAALDKAYR EAVSDIASQSKRLKDTFVNAFKSMGNAGSNALKASLNFIRELPSNVQAALSKLASTVK TGFVNAAKASITAVKNLGTSIKNTAVNIKNGFFSIAKTVQSSIVSAVKISINVIKSIP GAIKSAGISIKSALVSSLQAAKSAAISFAQTTVKVIKSIPGAAKTAATAVKNSFVVAY KAVVVAAYMSVKGTISAVKAIPSATKSAALAVSSAMKTAFSAVASAAKTTGTTVKSAL KTGFSAVKSGAKAAGQAGISALKGLGNIAKSTGSLIKSGLVSGFNAAKAAAKGAGAGM REALKNSVEKPAEQARFSILRLAAAFGLIAATKNVVGSAIGRVDTIDTATKSLTVLTG SAKDAQLVMTDLTAAIDGTPIALDAVALGAKKMVAAGMKAANVKPVFTAIADAAYGVG NGSESIDQMTDAISALQASGVAYADDINRLVDAGVPAWQILANSTGKSVGEMKKYVSE GSLESTRAIAMLTKGIEEGTTGMAGNTAKMAGLAKTAGNTISGSFANMKTAAVKSLAN IVENLKGPIIQALDVAKNAFKQFAAVTASPEFQKKLSDLIQKIKEFIPVLIEWAPLLA KVAAGFVAFNIISSVFSKVAKLAGAIKSLTSSGSLLSVVANTIKGSFVKLVGTLGSTT AAFGVVVAAVGAVIAVIYGMYTAFKENTAGIKSFLSGMWEAVKNSFGKIIDVFKQIVS ALKPVGSGFKGILKYIGVRAWVVLGFALAAVVDVIQVLARIVLVAIKALQGLYYAIKA AFQVLQGDLKGAKKSLEQSKDAFVDAGSAIKDAFNKDNYALTGTVEAFKQMGGEAEKT AKKTETSGKKIKDTLKLVESTAKQTETTVSKSNQAIDTMLSGGVDQYGNKLSEKTKSF LNSAKELYSQYQESAKKSQDAYTAAMEKAQSLEGDKRKKAIADANKTLVDETTKNNST LLTLQSDYSNMLKTNRWADGQELTAQQKKFLQQQTTDIQTELAKQNQLYVEANLLRLE QGKSLNEKERNTSLEVQKSLYEEKKKAVETGEKSLADLKKKKADASTETEKANYQIQI DEQTKKNQTLSTNLKNWASEMNSIIANGGTLNAQTFANGLSQLGNISDEQLSALWQNF VSTSTSIDNTLAGLAGIMGQRGGEGVQAFVTALQSGDYTTAALNINNDVLSTISSLPN GMFLNGESGKNQFLTAIKSGDFQGAGKYLVDGVKMGTDSIDSEMKTKGQTGGQNFADG VKGKEGAAKSAGSAVKNKAKEGATDPNAFKAVGSKDSAGFNNGVMGGKGGAYSAGSSV GNSAKSGAGSVDSSGVGSDFASGYVNGILSGMGAVGRAAASLANKALAAVQKKQDSHS PSKESKKLGGDFGTGYSLGIADKNKAVTKAANNLVASALGTESQIKKLSSTLKDKISS AIDAGLHSKNKSSGQLKQAKALNSIEGYIVQQTNRLAATAKKRDKVVAQLKAANTKMA DLTKQSKEYAASITEKMQSYGSISNVDPENPKSIQAEMQKRLKEIKAFQANVEKLRKK GVSKDIINDILESGVENGSSYAQALAKSDAKTIKAINSTQNQINSASKAMGNTAANAM YSAGINAAKGLINGLNSQKKQLEKAAKSIANTITNSVKKALKIHSPSRVAIELGKFFT GGLGNGVLAGAKGAVQSTNKMVDKVVNAASNMTVPTINLPKISAEKALGLKSVDLNRT ITVKTIIDNKTKESSNADLIKAIQQSGDRPIIFNVDGKDIADNTNNHLGSSTSLAFYG KGL" misc_feature complement(2372875..2375034) /locus_tag="lmo2287" /note="Phage tail tape-measure protein, controls tail length [Mobilome: prophages, transposons]; Region: HI1514; COG3941" /db_xref="CDD:443141" misc_feature complement(2371444..>2371701) /locus_tag="lmo2287" /note="Stathmin family; Region: Stathmin; pfam00836" /db_xref="CDD:459956" misc_feature complement(2371006..>2371434) /locus_tag="lmo2287" /note="Phage-related protein [Mobilome: prophages, transposons]; Region: COG5412" /db_xref="CDD:444167" regulatory complement(2370741..2370746) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2287" regulatory complement(2376107..2376112) /regulatory_class="ribosome_binding_site" gene complement(2376110..2376715) /locus_tag="lmo2288" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984603" CDS complement(2376110..2376715) /locus_tag="lmo2288" /experiment="EXISTENCE:[PMID:19448609]" /note="Protein gp15 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp15" /protein_id="NP_465812.1" /db_xref="GeneID:984603" /translation="MLSLAFGVNDIYEYEGKEYKLDLAFDNVLRVIDLTEDNSLSDVF RANLAIDVLFADDMPWPRSNEEDEYANIEEKSLVLIDIFTNYIVKENDDGLLYDIDGN KMPSATNNNDDAEEIASYSLTQDADYIYASFLQDYNIDLLDSRGKMHWYKFRALLESL RDDTTIKTIIGIRQAELPSGKGTEKERNELIKLKNRYKLKD" misc_feature complement(2376119..2376688) /locus_tag="lmo2288" /note="Bacteriophage Gp15 protein; Region: Phage_Gp15; pfam06854" /db_xref="CDD:429155" gene complement(2376721..2377143) /locus_tag="lmo2289" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984536" CDS complement(2376721..2377143) /locus_tag="lmo2289" /experiment="EXISTENCE:[PMID:19448609]" /note="Protein gp14 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp14" /protein_id="NP_465813.1" /db_xref="GeneID:984536" /translation="MAQNNVINIQLEESYQEFQLGTELFRVGLGDEMRRKWIEADEKY KKKLEKLNKYNIDNTDEMSSEDYFALEEDVKEALTEAYAVLLDDEEAFSKCYKQCKDI LKMYQVYDQVAESIVGSVEKQQNEIQKKYKAKMTKKAK" misc_feature complement(2376724..2377143) /locus_tag="lmo2289" /note="Phage tail assembly chaperone protein Gp14 ()A118; Region: Phage_TAC_8; pfam10666" /db_xref="CDD:402344" regulatory complement(2376724..2376729) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2289" regulatory complement(2377153..2377158) /regulatory_class="ribosome_binding_site" gene complement(2377198..2377530) /locus_tag="lmo2290" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986224" CDS complement(2377198..2377530) /locus_tag="lmo2290" /experiment="EXISTENCE:[PMID:19448609]" /note="Portein gp13 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp13" /protein_id="NP_465814.1" /db_xref="GeneID:986224" /translation="MLQNSQRLVAASLMMKHLRLQNPEESPSSVEVDHNTITVKVGET FTINASVLPVGASQEVTYTSSNPPKAKINSVGTGEGVAEGTANITVASKESTSINKVV QVTVEAAD" misc_feature complement(2377243..2377446) /locus_tag="lmo2290" /note="Bacterial Ig-like domain (group 2); Region: Big_2; cl02708" /db_xref="CDD:445894" gene complement(2377460..2377894) /locus_tag="lmo2291" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984534" CDS complement(2377460..2377894) /locus_tag="lmo2291" /experiment="EXISTENCE:[PMID:19448609]" /note="major tail shaft protein [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="major tail shaft protein" /protein_id="NP_465815.1" /db_xref="GeneID:984534" /translation="MRIKNAKTKYSVAEIVTGAGEPDWKRLSKWITNVSDDGSDNTEE QGDYDGDGNEKTVVLGYSEAYTFEGTHDREDDAQNLIVAKRRTPENRGIMFKIEIPDT ETAIGKATVSEIKGSAGGGDATEFPAFGCRIAYDETPTVTKP" regulatory complement(2377536..2377541) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2291" gene complement(2377897..2378304) /locus_tag="lmo2292" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984530" CDS complement(2377897..2378304) /locus_tag="lmo2292" /experiment="EXISTENCE:[PMID:19448609]" /note="Portein gp11 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp11" /protein_id="NP_465816.1" /db_xref="GeneID:984530" /translation="MSLDFLDSVMDAIENNVDLKDMKLRTAILKPESIALLLTPNNDK QGYQDGSYERSFSFNLNGSSKQEMKVLNVLNAITAYFDNTELESIQSLNNSFVLEDKE TTSVPNLVSASDDGTFIYSASFKIKLYIESEEK" misc_feature complement(2377915..2378268) /locus_tag="lmo2292" /note="Bacteriophage minor capsid protein; Region: Minor_capsid_3; pfam12691" /db_xref="CDD:432722" regulatory complement(2377905..2377910) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2292" regulatory complement(2378241..2378260) /regulatory_class="terminator" /locus_tag="lmo2292" gene complement(2378304..2378642) /locus_tag="lmo2293" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985592" CDS complement(2378304..2378642) /locus_tag="lmo2293" /experiment="EXISTENCE:[PMID:19448609]" /note="Protein gp10 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp10" /protein_id="NP_465817.1" /db_xref="GeneID:985592" /translation="MPIKVRVDLSKAKGSVKKAKERGQFALINQAAADIAPYVPFLEG DLSNQYVIMNDKEIMWTSIYARRLYNGINFNFTLTHHPLAGPKWDQRAKVDKLESWIE VAQKAVEEGL" misc_feature complement(2378322..2378612) /locus_tag="lmo2293" /note="Minor capsid protein; Region: Minor_capsid_2; pfam11114" /db_xref="CDD:431662" regulatory complement(2378312..2378317) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2293" gene complement(2378642..2379004) /locus_tag="lmo2294" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984580" CDS complement(2378642..2379004) /locus_tag="lmo2294" /experiment="EXISTENCE:[PMID:19448609]" /note="Protein gp9 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp9" /protein_id="NP_465818.1" /db_xref="GeneID:984580" /translation="MKVAKPITNAPPLPLDWLIHNISYEAYKEEDRHNQVVYEKGIEI EHVRVDFSKSNQIAGLSDSDRYDAVIFIDAVNSMNMPNDFISRSRIFFSGKAYKIVKV IPCYATSNSVYHWEIEVV" misc_feature complement(2378651..2378965) /locus_tag="lmo2294" /note="Minor capsid protein; Region: Minor_capsid_1; pfam10665" /db_xref="CDD:431423" regulatory complement(2378650..2378655) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2294" gene complement(2379004..2379399) /locus_tag="lmo2295" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984520" CDS complement(2379004..2379399) /locus_tag="lmo2295" /experiment="EXISTENCE:[PMID:19448609]" /note="Protein gp8 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp8" /protein_id="NP_465819.1" /db_xref="GeneID:984520" /translation="MPYTTLEFYTNEYAGEHLEQDEFDKLLKHAERKIDSVTFYRIRK SGIESFSEFIQHQIQLATCNQIEYFKEAGGTSELAVSKPDNVSIGRTSISDSNFASTA TSLNSGLIGSDVRTYLAPTGLLYSGVGVR" misc_feature complement(2379016..2379399) /locus_tag="lmo2295" /note="Putative Head-Tail Connector Protein Yqbg from Bacillus subtilis and similar proteins; Region: Yqbg; cd08053" /db_xref="CDD:153445" regulatory complement(2379014..2379019) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2295" regulatory complement(2379409..2379414) /regulatory_class="ribosome_binding_site" gene complement(2379418..2380419) /locus_tag="lmo2296" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986052" CDS complement(2379418..2380419) /locus_tag="lmo2296" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phage coat protein" /protein_id="NP_465820.1" /db_xref="GeneID:986052" /translation="MGNEITKLLDVVTPEVFNAYMDNFTSEKSAIIQSGIAVADPSVA QNITAGGLLVNMPFWNDLDGEDETLGDGEKGLETGKITASADIAAVMYRGRGWSVNEL AAVISGDDPLNALMGKIASWWMRREQTVLISVLNGLFAKNGALASSHLLSKPTSAISG NLVLDAKQLLGDSADRLNLMVMHSAVYTALQKQNLIAFIPNARGEVNIPTYLGYRVVV DDGVPSTGTGAAKVYTSYLFATGSIGRNTGNPAKLTTFETARDASKGNDQVFTRRAFT MHPYGVKFKNAVRDANEITPTNADLAKAGNWEKVYEDKQIGIVGIQHLVEELPAGGA" gene complement(2380419..2381009) /locus_tag="lmo2297" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985222" CDS complement(2380419..2381009) /locus_tag="lmo2297" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="scaffolding protein" /protein_id="NP_465821.1" /db_xref="GeneID:985222" /translation="MQREYLKGLGLEDEVINKVMAENGKDVTAAKQQLSEVEAERDGL KSQLTQRDKDIDDLKKNSGTGEELKKQIEDLQQKNKDLESDYQSEIAETKKNSAIELA LAGAKARNPKAVKALLDNDKLELTDEGLKGLDEQLGALQESDAYLFAQESEKVPKFGF SGNPKAPAGYDGSLKENLKSDSFNLTKFLTEKGESE" misc_feature complement(2380536..2380970) /locus_tag="lmo2297" /note="Phage minor structural protein GP20; Region: Phage_GP20; pfam06810" /db_xref="CDD:429131" regulatory complement(2380429..2380434) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2297" regulatory complement(2381017..2381022) /regulatory_class="ribosome_binding_site" gene complement(2381088..2382227) /locus_tag="lmo2298" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984594" CDS complement(2381088..2382227) /locus_tag="lmo2298" /experiment="EXISTENCE:[PMID:19448609]" /note="Protein gp4 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="protein gp4" /protein_id="NP_465822.1" /db_xref="GeneID:984594" /translation="MALTPRQLDLFVQPVVDVYTGLENELFTLIVRRLKTKKNISADN VLAWQIEKLNQVHALDQQMLNKISKASGVSAKKLFSIVKDAGYSDLKQVDNYFSKLAE AGAVLPLVGDGQTIVDKVMRSYFKLAESNYNRVNQTMLSQARQIYSDIIHETTQSVLA GLKTHRQALAETVTKFAENGVPALVDKANKRWTPEAYVRTVTRTTVNSVYNSVEDERM NEYDVDLVRISQHVGARPTCSLVQGKVICLLSVEETKTKYGNKYMSIYSPELRYGYGD GVFGCNCRHHRFPFVEGINVAPEDSELIDEEENKRVYMLSQQQRLMERDIRASKRKLS AAEELGDELAVKKAKQAVRTKQSKLRAFVNTHKLTRQYSREQVYA" misc_feature complement(2381136..2382221) /locus_tag="lmo2298" /note="Phage minor capsid protein 2; Region: Phage_min_cap2; pfam06152" /db_xref="CDD:428793" gene complement(2382228..2383988) /locus_tag="lmo2299" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984584" CDS complement(2382228..2383988) /locus_tag="lmo2299" /experiment="EXISTENCE:[PMID:19448609]" /note="portal protein [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="portal protein" /protein_id="NP_465823.1" /db_xref="GeneID:984584" /translation="MINQIIASVKGVMRRMGLLKALKDVKDHKKVNANDEDYKYIDMW KRLYQGHYAEWHNLNYEHNGNPVNRRQLSMNLPKVTAKYMSKLLFNEKVKINIDDKAA EEFVLNVLKTNGFTKNMERYIEYGEAMGGFVIKVYHDGKKNVKVSFATADCMYPLSND SENVDECVIANSFHKNDKYYTLLEWNEWQDDIYTVTTELYQSDDPDELGGKVSLKLLF NDIEPVVPLPKFTRPTFIYIKPNIANNKNLTSPLGISVYANALDTLKTLDLMFDSFYQ EFKLGKKKVLVPSSFVKTAIGLDGSTTQYFDSTDEAFFLYQGDQDADGKSVKDISVEI RSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLKTATEVVSEKSETYQTKNSHSQLI EQGIKEMIVSILEVGKFIEAYSGEVVELDTITVDFDDSIAQDEDTTINRYTTAKNQGM IPLKIALQRAWNITDAEAEAWKEEIEKDVQAEIPGNDLSGLLGDIELPDENANGTLEA SAVAGETIQEVSLNGAQITSLVNIVQSVAKGELPYNSALEMIVAAFPFDEEKARKILA DAGNGFVITEKEKTSKKEVD" misc_feature complement(2382537..2383949) /locus_tag="lmo2299" /note="Phage portal protein, SPP1 Gp6-like; Region: Phage_prot_Gp6; cl19531" /db_xref="CDD:418597" misc_feature complement(<2382264..>2382461) /locus_tag="lmo2299" /note="The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold; Region: PBP2_NikA_DppA_OppA_like; cl01709" /db_xref="CDD:445520" regulatory complement(2382236..2382241) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2299" regulatory complement(2383997..2384002) /regulatory_class="ribosome_binding_site" gene complement(2384001..2385332) /locus_tag="lmo2300" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984593" CDS complement(2384001..2385332) /locus_tag="lmo2300" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="terminase large subunit from bacteriophage A118" /protein_id="NP_465824.1" /db_xref="GeneID:984593" /translation="MNATIHKQLIDYQVINVTDMINPAFYDLWLSKHNHIIAKGGRSS MKSSVISLKLVEKKMANPQSNMVCLRKVANTLYKSVYQQIKWALYEMGVADQFKFGKS PMEIIHKEWGTGFYFSGCDDPAKLKSMKIPVGYVSDLWFEELAEFSGVTDIDVVEDTF IREDLPDGQEVTIYMSFNPPRNPYEWVNEYVDSKRSDDDYLIHHTTYLDDEKGFLSKQ IIKKIEKYKKNDLDYYRWMYLGEVIGLGDNVYNMNLFQPLKAIPADDRLILIDFAIDT GHQVSATTYLSFGLTAKRNVILLNTYYYSPANQVVKKAPSEYSKELRDFMTKVVGNYN TNVDMQTVDSAEGGLRNQYYKDYGVSLHPVAKGKKVDMIDFVCDLLAQGRFYYLDIPE NQIFIEEHRKYQWDVKTVNTDKPEVIKEDDHTCDAFQYYVKDNLRKLGLKY" misc_feature complement(2384010..2385290) /locus_tag="lmo2300" /note="Phage terminase large subunit [Mobilome: prophages, transposons]; Region: XtmB; COG1783" /db_xref="CDD:441389" gene complement(2385301..2386095) /locus_tag="lmo2301" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985295" CDS complement(2385301..2386095) /locus_tag="lmo2301" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="terminase" /protein_id="NP_465825.1" /db_xref="GeneID:985295" /translation="MKTEEKYKIFAKTYVMNGFNGKEAAISAGYSTKTAEQQASRLLR NVKVLELIDEEMKLLSKRMQDDASKIYAELWKQVRMIDDKMAKHEEASRKLSITDARK ITAIADINNLKAKIRRTESKIKKMDGRKADEGKFKKELLEEYDELKIQLEELEDSVSE IYEENSTSKRDLLWHKDWKEILSLRAQILQDLFDRSGYKETKDMQDRRVALLDAQINK LELEAKKDCKDSGFATIIMSNVDEMQAYLDKKAGGTDERDDTQTTN" misc_feature complement(<2385859..2386083) /locus_tag="lmo2301" /note="Terminase small subunit; Region: Terminase_2; pfam03592" /db_xref="CDD:427384" misc_feature complement(<2385409..>2386005) /locus_tag="lmo2301" /note="RecF/RecN/SMC N terminal domain; Region: SMC_N; cl47134" /db_xref="CDD:481474" regulatory complement(2385342..2385347) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2301" regulatory complement(2386105..2386110) /regulatory_class="ribosome_binding_site" gene complement(2386141..2386680) /locus_tag="lmo2302" /db_xref="GeneID:984881" CDS complement(2386141..2386680) /locus_tag="lmo2302" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2302" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465826.1" /db_xref="GeneID:984881" /translation="MSFILEVGSLADWVSGLATVGALFWAIKLNSNENRKRLTILFRH SFVSKKNGIIISDGKPKVFIITPVNNSKFSLEINFRQILLVPSLMDRLLFRAEPKKLS NIEALLKQLENKANWQIIKPNLSGEPIMFDYEFIVKQIKKYADGKRFNFAIEIQFIDS TSKIFKHKEKLELRKIKGL" regulatory complement(2386141..2386156) /regulatory_class="terminator" /locus_tag="lmo2302" regulatory complement(2386687..2386692) /regulatory_class="ribosome_binding_site" gene 2386715..2386992 /locus_tag="lmos87" /db_xref="GeneID:18245171" misc_RNA 2386715..2386992 /locus_tag="lmos87" /product="rliG" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245171" gene complement(2387046..2387480) /locus_tag="lmo2303" /db_xref="GeneID:984511" CDS complement(2387046..2387480) /locus_tag="lmo2303" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465827.1" /db_xref="GeneID:984511" /translation="MGQLFNLPQVEDINYIQTVRAVRKFFKDYLMLRVMAGSRKLPTM TTTYKLTPPNFSNEFHSKVEDAAIHNVDNVHAAQEAVKKYDAILNQLEHIHRKILFEK FIHNLQDITIMLDIPYEERQYKREKRKAVIELATTLGIEVLN" misc_feature complement(2387058..2387450) /locus_tag="lmo2303" /note="phage transcriptional regulator, ArpU family; Region: phage_arpU; TIGR01637" /db_xref="CDD:273725" regulatory complement(2387488..2387492) /regulatory_class="ribosome_binding_site" gene complement(2387499..2387663) /locus_tag="lmo2304" /db_xref="GeneID:984687" CDS complement(2387499..2387663) /locus_tag="lmo2304" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465828.1" /db_xref="GeneID:984687" /translation="MQIEKLNVFTRETICDGKDVEIANYNIEFEAISEESFIDTAEKV EKIREFIENL" regulatory complement(2387670..2387675) /regulatory_class="ribosome_binding_site" gene complement(2387792..2388175) /locus_tag="lmo2305" /db_xref="GeneID:984560" CDS complement(2387792..2388175) /locus_tag="lmo2305" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2305" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465829.1" /db_xref="GeneID:984560" /translation="MTVMEITKSKARQREIISYIANNDVELDELLKLQKELNQLMNEN TIEKQKTYWTKTFDRIVKKKKWAEITIREFADLRNAGLTCYAIAEHFKVSKAVVFNYT QRNKKEYYQIFDMNEYQKNKEIWND" misc_feature complement(2387798..2388175) /locus_tag="lmo2305" /note="Protein of unknown function (DUF2481); Region: DUF2481; pfam10654" /db_xref="CDD:463172" gene complement(2388179..2388583) /locus_tag="lmo2306" /db_xref="GeneID:984507" CDS complement(2388179..2388583) /locus_tag="lmo2306" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465830.1" /db_xref="GeneID:984507" /translation="MRQSIPRSSLTRRTSTRSKYNAKKVVIDNIKFDSKAEAAYYQQL KLLKMSGEVVSFDLQPEFVLQESFRKNGKLYRAIKYKADFLVRYSDGHEELIDIKGML TKEFRIKQKLFELRYMQSIKCLKLKGRNFVEV" misc_feature complement(2388200..2388535) /locus_tag="lmo2306" /note="Protein of unknown function (DUF1064); Region: DUF1064; pfam06356" /db_xref="CDD:428901" regulatory complement(2388184..2388189) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2306" gene complement(2388528..2388710) /locus_tag="lmo2307" /db_xref="GeneID:985885" CDS complement(2388528..2388710) /locus_tag="lmo2307" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465831.1" /db_xref="GeneID:985885" /translation="MTADTAIKKLRNRSMSIRQMANAIAEVTNYQISEIESMGDEEIE AKYTAFVINEANEYAK" regulatory complement(2388593..2388597) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2307" regulatory complement(2388718..2388723) /regulatory_class="ribosome_binding_site" gene complement(2388729..2389211) /locus_tag="lmo2308" /db_xref="GeneID:984487" CDS complement(2388729..2389211) /locus_tag="lmo2308" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="single-stranded DNA-binding protein" /protein_id="NP_465832.1" /db_xref="GeneID:984487" /translation="MMNRVVLVGRLTKDPDLRYTPAGVAVATFTLAVNRTFTNQNGER EADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTRNYEDNDGKRVFVTEVVAESVQF LEPKNNNVEGATSNNYQNKANYSNNNQTSSYRADTSQKSDSFASEGKPIDINEDDLPF " misc_feature complement(2388732..2389211) /locus_tag="lmo2308" /note="This superfamily includes two oligonucleotide/oligosaccharide binding fold (OBF) domain families. One of these contains the OBF domains of the large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small (RPA3, 14 kDa) subunits of human heterotrimeric...; Region: Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.; cl09930" /db_xref="CDD:471953" misc_feature complement(order(2388933..2388935,2388942..2388944, 2388975..2388977,2389002..2389004,2389065..2389067, 2389071..2389073,2389107..2389115,2389188..2389199)) /locus_tag="lmo2308" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:239942" misc_feature complement(order(2388924..2388926,2388930..2388932, 2388969..2388974,2388978..2388980,2388984..2388986, 2389008..2389013,2389050..2389052,2389056..2389058, 2389062..2389064,2389068..2389070,2389074..2389079, 2389104..2389109,2389128..2389130,2389158..2389160, 2389176..2389184)) /locus_tag="lmo2308" /note="ssDNA binding site [nucleotide binding]; other site" /db_xref="CDD:239942" misc_feature complement(order(2388909..2388911,2388990..2388992, 2388996..2388998,2389002..2389004)) /locus_tag="lmo2308" /note="tetramer (dimer of dimers) interface [polypeptide binding]; other site" /db_xref="CDD:239942" gene complement(2389208..2389387) /locus_tag="lmo2309" /db_xref="GeneID:984390" CDS complement(2389208..2389387) /locus_tag="lmo2309" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2309" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465833.1" /db_xref="GeneID:984390" /translation="MKYKITYLSQEVYEVEAENEEEAIRIAEFNPMYRPDAHIKLIED ENLLDCELMKEREDE" regulatory complement(2389220..2389225) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2309" regulatory complement(2389395..2389400) /regulatory_class="ribosome_binding_site" gene complement(2389491..2389658) /locus_tag="lmo2310" /db_xref="GeneID:985397" CDS complement(2389491..2389658) /locus_tag="lmo2310" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2310" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465834.1" /db_xref="GeneID:985397" /translation="MKHKIVQVGFLADKGEELIKLLDDGWKILTATYVGDNIEQMGGL VQYVLRKEAEE" gene complement(2389655..2390116) /locus_tag="lmo2311" /db_xref="GeneID:985523" CDS complement(2389655..2390116) /locus_tag="lmo2311" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2311" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465835.1" /db_xref="GeneID:985523" /translation="MKHGQWMLNGTDGERWGAFERFDTKEEAIIYGVELLTEYNSLDD DERRDYDLSDGLNMRPLDYENIYTFFVGQIEEVEFPTEVDTLLENIAQCVYDEVGECG EEYLNDVTQEHKEQLSDLIYEWAKQRDYLPACFKIEMVEEIDIRSFEEVAE" regulatory complement(2389666..2389671) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2311" gene complement(2390113..2390583) /locus_tag="lmo2312" /db_xref="GeneID:984469" CDS complement(2390113..2390583) /locus_tag="lmo2312" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2312" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465836.1" /db_xref="GeneID:984469" /translation="MKQEELDIILENHGKWLFNEGGDRADLSNADLKNTNLRFANLRL ADLRGADLSYANLRFANLSNADLSYANLSNVNLNWVNWQHVEGLTVICVQVDTTRKNN QIAYIKELDIWITGCFQGTLDELKASVEQTHGDNEKLRKRYYRVIDFILKEVAE" misc_feature complement(2390329..>2390517) /locus_tag="lmo2312" /note="Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; Region: YjbI; COG1357" /db_xref="CDD:440968" regulatory complement(2390124..2390129) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2312" gene complement(2390580..2391023) /locus_tag="lmo2313" /db_xref="GeneID:984501" CDS complement(2390580..2391023) /locus_tag="lmo2313" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465837.1" /db_xref="GeneID:984501" /translation="MRAIGFRAFVKRKKKMLPVTDLCFNETEAVGVSGCGNAKCTLCV DWYSFDDVVLMQYTGLKDKNGKKIFEGDVVTAFSNINKYTDSFAGDVEPTFCFTSIVY DGACFKTTYKGEPSYVLNQNGSSLVKHMEVIGNIHENPELLEGTE" misc_feature complement(2390586..2391017) /locus_tag="lmo2313" /note="phage uncharacterized protein TIGR01671; Region: phage_TIGR01671" /db_xref="CDD:273746" regulatory complement(2390591..2390596) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2313" gene complement(2391020..2391217) /locus_tag="lmo2314" /db_xref="GeneID:984495" CDS complement(2391020..2391217) /locus_tag="lmo2314" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2314" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465838.1" /db_xref="GeneID:984495" /translation="MELYAIVDEDLQVAKHRSKGTLAVFKDLEMLKKHAWRYKESGKL YKIAELEPINFFSFEEAEGEA" regulatory complement(2391031..2391036) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2314" gene complement(2391220..2391816) /locus_tag="lmo2315" /db_xref="GeneID:984491" CDS complement(2391220..2391816) /locus_tag="lmo2315" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465839.1" /db_xref="GeneID:984491" /translation="MRFKEGDKVQFIENNELIIGTIKRVNNDVGWVDLKVSDLSWFFR KLEDVVKVKEPELIAVPRFAADWIKHCKQREYDLACLLDYEDSDMSAEMYEWLISSAD NQELLARAWLDGYEVEKEPLYYVRLPLSTWNDDAAELEVINMYVLLNVQSDETSITGS IINENKEWRTKLTEAEIKGIPGGEIYWQFAVLVEEAEA" misc_feature complement(2391235..2391654) /locus_tag="lmo2315" /note="Protein of unknown function (DUF1642); Region: DUF1642; pfam07852" /db_xref="CDD:369557" regulatory complement(2391225..2391230) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2315" gene complement(2391813..2392625) /locus_tag="lmo2316" /db_xref="GeneID:984490" CDS complement(2391813..2392625) /locus_tag="lmo2316" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="site-specific DNA-methyltransferase" /protein_id="NP_465840.1" /db_xref="GeneID:984490" /translation="MKRILNYPGSKWGLADLIIENMPEHKSYLEPFCGSCAVFMNKQK ATLETINDLDGRLVNLFKAMRDNPEKLQYLIMHTLYSREEYMLSQEITSDSLEDARRM AVRLWFAVGGKTNANVGFRKNVSWNGPYNAYEWNDMYNRIGIAAARLKDAQIENVDAI KLIEQHNDKDTLIYCDPPYVATSLASSHYQHDFSLEQHKELLKVLKNHDGKVMLSGYE SELYKQELSDWPVLKTMTKVGITSEKKSDRQEIIWCNFEPPMQLNLFKEEKA" misc_feature complement(2391864..2392625) /locus_tag="lmo2316" /note="DNA-adenine methylase [Replication, recombination and repair]; Region: Dam; COG0338" /db_xref="CDD:440107" regulatory complement(2391824..2391829) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2316" gene complement(2392622..2393596) /locus_tag="lmo2317" /db_xref="GeneID:984715" CDS complement(2392622..2393596) /locus_tag="lmo2317" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465841.1" /db_xref="GeneID:984715" /translation="MSGIQWIKLSVNMFDDEKIKLLEKMPEGNQMLIVWIRLLALAGK TNDKGRIYLNENVPYTEDMLATLFNRDVGIIRVTLHTLQSFGMIQKTENGLIEIENWE KHQNVDGMERVREQTRKRVEKHREAMRQNRIASGDSKGNKECNVTSSVTVTQSNAIDI DKELDKDINNNNSDLNFKDFWEQNGFGMMLPVELEKLLAWVDDFAGNREIVMKALEVT SEQGANKRNYAYVNKILKNWESRGFKTIADVDAAEKQRQIELEQKYNKPTYNKYNKPV KEEVLPDWFDKDQKQTKQETSTTGSSEDLEKQVAEIKAQLAARNEVQA" misc_feature complement(2393219..2393581) /locus_tag="lmo2317" /note="N-terminal phage replisome organizer (Phage_rep_org_N); Region: Phage_rep_org_N; pfam09681" /db_xref="CDD:430749" misc_feature complement(2392844..2393068) /locus_tag="lmo2317" /note="DnaD and phage-associated domain; Region: DnaD_dom; TIGR01446" /db_xref="CDD:273630" misc_feature complement(2392634..>2392936) /locus_tag="lmo2317" /note="Replication initiation and membrane attachment protein DnaB [Replication, recombination and repair]; Region: DnaB2; COG3611" /db_xref="CDD:442829" regulatory complement(2392633..2392638) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2317" regulatory complement(2393604..2393609) /regulatory_class="ribosome_binding_site" gene complement(2393613..2394311) /locus_tag="lmo2318" /db_xref="GeneID:984489" CDS complement(2393613..2394311) /locus_tag="lmo2318" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2318" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465842.1" /db_xref="GeneID:984489" /translation="MKKSESIGAIAKAMAAIQKEVKPLEKSAANPFTDSKYTPLDKIV EAIFKVAPGHGVSFTQWPISGDNGTIGIGTMLMHESGEWIEYDPLYMTVITNKKMSSA QEAGGTITYAKRYVIAAVFGIVSDEDKDGNIQSSPSKYPKNNSYKSNNYNQNSNSQQQ TKQSQQNDNLASPAQRKAIFAKASVIGEPFGHDGTFVLESYKITDTKSMSKGEASALI KKLDAEIEAQKQVN" misc_feature complement(2393889..2394284) /locus_tag="lmo2318" /note="ERF superfamily; Region: ERF; pfam04404" /db_xref="CDD:427926" gene complement(2394317..2394793) /locus_tag="lmo2319" /db_xref="GeneID:984557" CDS complement(2394317..2394793) /locus_tag="lmo2319" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465843.1" /db_xref="GeneID:984557" /translation="MKLYELTQAYNQVLEMAEELDTETLQDTLDSIREPIEEKAENII KMVKSIDAEAEGLAKEVERLTKRKTALDAKAKNMKEYLESEMLKVDIRKIKSSLFTIS IQKNPPSLRLEDEEKLFMFLVEQPKKLDKKAITSALKEGRDVPGAKLVQTESLRVR" misc_feature complement(2394320..2394790) /locus_tag="lmo2319" /note="Siphovirus Gp157; Region: Sipho_Gp157; pfam05565" /db_xref="CDD:398934" regulatory complement(2394320..2394325) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2319" gene complement(2394790..2394984) /locus_tag="lmo2320" /db_xref="GeneID:986602" CDS complement(2394790..2394984) /locus_tag="lmo2320" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2320" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465844.1" /db_xref="GeneID:986602" /translation="MDNFKTIHYGFKVVIHDYDDELTPLYNLLKKQSTNLEGSKLFDE LIDIHEKLAKKIEQREGVQA" regulatory complement(2394803..2394808) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2320" regulatory complement(2394991..2394996) /regulatory_class="ribosome_binding_site" gene complement(2395290..2395478) /locus_tag="lmo2321" /db_xref="GeneID:984486" CDS complement(2395290..2395478) /locus_tag="lmo2321" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2321" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465845.1" /db_xref="GeneID:984486" /translation="MAERIFRKQTIFGNSEIFIDDRTKMIANPAFRQKIALIETGCEK MTDYIEELKLKGYEEVTR" misc_feature complement(2395293..2395478) /locus_tag="lmo2321" /note="Protein gp45 of Bacteriophage A118; Region: Phage-A118_gp45; pfam10653" /db_xref="CDD:287607" regulatory complement(2395487..2395492) /regulatory_class="ribosome_binding_site" gene complement(2395586..2395801) /locus_tag="lmo2322" /db_xref="GeneID:984678" CDS complement(2395586..2395801) /locus_tag="lmo2322" /experiment="EXISTENCE:[PMID:19448609]" /note="gp44 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="gp44" /protein_id="NP_465846.1" /db_xref="GeneID:984678" /translation="MSEVLVSASYEGYESKSINFTEINNIVKERFKKIDEVERKKRAE TFNKKYEVTKELVDGHLREIIIPRRTL" gene complement(2395798..2396331) /locus_tag="lmo2323" /db_xref="GeneID:986266" CDS complement(2395798..2396331) /locus_tag="lmo2323" /experiment="EXISTENCE:[PMID:19448609]" /note="gp43 [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465847.1" /db_xref="GeneID:986266" /translation="MFQKSTSATAAMQVLAETRTQKELAIDSYVTPALISNQIKGKRT VSLEQAEQLIDSYNEPRSTYLFAHEFSNGMIPPLFDGLDNHHASLTNRFELEVEEAMN TLKNGLETMTFNLRKGDMLQREAAKQAISEITDVVASALTLNASIAIAFNIDLQQVLN KRDLYYQKSGLVRSCGK" regulatory complement(2395810..2395815) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2323" regulatory complement(2396340..2396345) /regulatory_class="ribosome_binding_site" gene complement(2396454..2397230) /locus_tag="lmo2324" /db_xref="GeneID:986505" CDS complement(2396454..2397230) /locus_tag="lmo2324" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="anti-repressor" /protein_id="NP_465848.1" /db_xref="GeneID:986505" /translation="MSNLQVIANEMLPVLENEQGEKFVDARMLHEKLLVNTRFNDWIY RMIGNYGYENGLDFYSTLSKTNGRPSTNYFLTLDTAKELAMVQNNEMGRAIRKYFIEV EKQARKLATEYPAFSYMIEDPVARAKKWIEEQQEKQEVLKKLEEQKPKVVFAEAVQTS ENTILVKDLATILKQKGLDIGQNRLFEWLRGSGYLLSKGAYYNKPSQKAMNLGLFEQK THIHTDRNGLMKTTYTPQVTGKGQVYLLNKLLEEHNQVII" misc_feature complement(2396553..2397224) /locus_tag="lmo2324" /note="Phage anti-repressor protein Ant [Mobilome: prophages, transposons]; Region: COG3561" /db_xref="CDD:442782" gene complement(2397212..2397487) /locus_tag="lmo2325" /db_xref="GeneID:984475" CDS complement(2397212..2397487) /locus_tag="lmo2325" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2325" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465849.1" /db_xref="GeneID:984475" /translation="MIFTVNSFPQSGHVFTPGLTVNTCEHSGQLPSVPFLIISCFAIF RLCSLICLSNFFESNLILTPILPTSLHKNYSTVKGRTERRTKCQIYK" regulatory complement(2397236..2397241) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2325" gene 2397294..2397491 /locus_tag="lmo2325a" /db_xref="GeneID:16695802" CDS 2397294..2397491 /locus_tag="lmo2325a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475639.1" /db_xref="GeneID:16695802" /translation="MGVKIKFDSKKLERQIKEQSLKIAKQDIIKNGTEGSCPECSHVF TVKPGVNTCPDCGNEFTVKIK" misc_feature <2397345..2397482 /locus_tag="lmo2325a" /note="Hydrogenase/urease nickel incorporation, metallochaperone, hypA; Region: HypA; pfam01155" /db_xref="CDD:460085" gene complement(2397493..2397774) /locus_tag="lmo2326" /db_xref="GeneID:984477" CDS complement(2397493..2397774) /locus_tag="lmo2326" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465850.1" /db_xref="GeneID:984477" /translation="MNNIKQAIIKLETILENGNAIESGSFVKYSVIKNILSLLEKDQE LKIIEMKVELNGVEDSIENATLLEKRLIEAKSLVEDLASTINSLEIKVK" regulatory complement(2397498..2397503) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2326" regulatory complement(2397782..2397787) /regulatory_class="ribosome_binding_site" gene complement(2397800..2398084) /locus_tag="lmo2327" /db_xref="GeneID:984480" CDS complement(2397800..2398084) /locus_tag="lmo2327" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2327" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465851.1" /db_xref="GeneID:984480" /translation="MNRRYLSNKRSEQKDCVFKTKDIPPENLKSLNIKMQGDRNCCYG VLEINGKQLRKGITAVKLDLKAGSLPVVQVEYHPFTISEEMQRLIWSGKY" regulatory complement(2398092..2398097) /regulatory_class="ribosome_binding_site" gene complement(2398287..2398529) /locus_tag="lmo2328" /db_xref="GeneID:988011" CDS complement(2398287..2398529) /locus_tag="lmo2328" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="XRE family transcriptional regulator" /protein_id="NP_465852.1" /db_xref="GeneID:988011" /translation="MRIWLKKIREENGLTQQDVAELADVERTTYASIEQGRRNPSVVN AMRIASVLDFEWTIFFDDKVREKSHFYLNEKQEARK" misc_feature complement(2398341..2398529) /locus_tag="lmo2328" /note="DNA-binding transcriptional regulator, XRE-family HTH domain [Transcription]; Region: XRE; COG1476" /db_xref="CDD:441085" regulatory complement(2398535..2398540) /regulatory_class="ribosome_binding_site" regulatory 2398672..2398677 /regulatory_class="ribosome_binding_site" gene 2398685..2399161 /locus_tag="lmo2329" /db_xref="GeneID:988012" CDS 2398685..2399161 /locus_tag="lmo2329" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465853.1" /db_xref="GeneID:988012" /translation="MFGDILMKLRKNKNLTQSDIAKILGVARTTYSSYEQNRRMPDAE IQIKIADYFDVSLDYLHGRGKNNIADTIAAHIDSNASEEDIKEILAYIEEKRKEHVNE EEINITDAASKGDKEVNEFVDENEDFKAVAARIMSDAEAVKAVKSFIEFYEQQKNN" misc_feature 2398685..>2398864 /locus_tag="lmo2329" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" gene 2399320..2399487 /locus_tag="lmo2329a" /db_xref="GeneID:16695803" CDS 2399320..2399487 /locus_tag="lmo2329a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475640.1" /db_xref="GeneID:16695803" /translation="MKTLDELNVKHDIVILEHEFTSCSFTLKKEIFIVIDSRLSRSEK LEDIARLLNKI" regulatory 2399528..2399533 /regulatory_class="ribosome_binding_site" gene 2399542..2400243 /locus_tag="lmo2330" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985317" CDS 2399542..2400243 /locus_tag="lmo2330" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465854.1" /db_xref="GeneID:985317" /translation="MSKYSYLLKKWWFWILLLLIILSLFNGIWVLLFFATLATLTFAI IKVIKNENRRKYTLIIIATTVLLLTFSLIRTVQLYNYIVENPEENVTIDNQKKDTKED AETDEVEETEETDQADASAAYTVTQEGIESFNESINRLISESNGILIKVVPFENEYDM LIAYVTQDLKYQDETIKQKNADYLGNEIQQRALGTLFGGDSNHRPMVELRYEDETKMA GSSAFDKTNMKLTGK" regulatory 2400251..2400256 /regulatory_class="ribosome_binding_site" gene 2400264..2400944 /locus_tag="lmo2331" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985570" CDS 2400264..2400944 /locus_tag="lmo2331" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465855.1" /db_xref="GeneID:985570" /translation="MKKGIALLAGFMLAFSIFLTGCGGTDNTRKENHSDGSAEVKNKK DNNTSDEYVEDGLLLKVGEWTKDKDYDTKVTLEKIATPKIKVGLGDLNMLIKDVKIFK RENVSDAEKEEFSGGKVPVTDPYYTIQVKYDLENTGKNVLNFNGIDYIITDQKQQIDV MTDNIGINGVFTVQPDVIVEDEYVICILKKDNVDKINKVTIKTSPVYNSETYDEITKS MTINIEFK" regulatory 2400996..2401001 /regulatory_class="ribosome_binding_site" gene 2401008..2402366 /gene="int" /locus_tag="lmo2332" /db_xref="GeneID:986704" CDS 2401008..2402366 /gene="int" /locus_tag="lmo2332" /experiment="EXISTENCE:[PMID:19448609]" /note="integrase [Bacteriophage A118]" /codon_start=1 /transl_table=11 /product="integrase" /protein_id="NP_465856.1" /db_xref="GeneID:986704" /translation="MKAAIYIRVSTQEQIENYSIQAQTEKLTALCRSKDWDVYDIFID GGYSGSNMNRPALNEMLSKLHEIDAVVVYRLDRLSRSQRDTITLIEEYFLKNNVEFVS LSETLDTSSPFGRAMIGILSVFAQLERETIRDRMVMGKIKRIEAGLPLTTAKGRTFGY DVIDTKLYINEEEAKQLQMIYDIFEEEKSITSLQKRLKKLGFKVKSYSSYNNWLTNDL YCGYVSYADKVHTKGVHEPIISEEQFYRVQEIFSRMGKNPNMNRDSASLLNNLVVCSK CGLGFVHRRKDTVSRGKKYHYRYYSCKTYKHTHELEKCGNKIWRADKLEELIIDRVNN YSFASRNVDKEDELDNLNEKLKTEHTKKKRLFDLYISGSYEVSELDAMMADIDAQINY YEAQIEANEELKKNKKIQENLADLATVDFDSLEFREKQLYLKSLINKIYIDGEQVTIE WL" misc_feature 2401008..2402111 /gene="int" /locus_tag="lmo2332" /note="Site-specific DNA recombinase SpoIVCA/DNA invertase PinE [Replication, recombination and repair]; Region: SpoIVCA; COG1961" /db_xref="CDD:441564" gene 2402357..2402833 /locus_tag="lmo02333" /db_xref="GeneID:984719" CDS 2402357..2402833 /locus_tag="lmo02333" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475641.1" /db_xref="GeneID:984719" /translation="MALVACLFRLFSSSFPLVGRKEGTKHLIGVTHKPPIIIDPVTST YVFPTVAPSSTECIWIFPQHIKDYHAIGFNHTLITFSNMETFEIDMSLASFNNQIART SMLHMKFSQKMRIMESNFPSMNRFFPPTTLAAEPRRYYSTMLPNNEEPNDPQDPEQ" misc_feature <2402369..2402734 /locus_tag="lmo02333" /note="Competence transcription factor ComK [Transcription]; Region: ComK; COG4903" /db_xref="CDD:443931" misc_feature 2402357..2402833 /locus_tag="lmo02333" regulatory complement(2402841..2402875) /regulatory_class="terminator" regulatory 2402852..2402875 /regulatory_class="terminator" gene complement(2402888..2403235) /locus_tag="lmo2334" /db_xref="GeneID:984993" CDS complement(2402888..2403235) /locus_tag="lmo2334" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_465857.1" /db_xref="GeneID:984993" /translation="MEFGEKLIHLRKKNRLTQKQLAAKIGTTASTISKYENDNHRPPI FILAKLAEILGTTTDFLLDDVAGLREKNSVNAFPLIGNPELEKWYLELPYTYSEDELL MLKRIADAIENKK" misc_feature complement(2403044..2403235) /locus_tag="lmo2334" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" regulatory complement(2403244..2403249) /regulatory_class="ribosome_binding_site" gene complement(2403341..2405239) /gene="fruA" /locus_tag="lmo2335" /db_xref="GeneID:984474" CDS complement(2403341..2405239) /gene="fruA" /locus_tag="lmo2335" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIABC" /protein_id="NP_465858.1" /db_xref="GeneID:984474" /translation="MRITDLLSKDVMIMSLQATTKEAAIDEMIASLKSNGKINDEVLF KKAIMNREAQSSTGVGEGIAMPHAKTKAVNEPTVVFAKSEKGLDYDALDGQPAHLFFM IAAPDGANATHLETLAALSRLLVHPAFVQSLRDAKTPEEVINLFNNEQEDSEETVVAP TSTNDTGKSVVAVTACPTGIAHTYMAAEKLQETANKLGVRIKVETNGSRGVENRLTDK EIAEADGVIIAADVQVDMPRFDGKHLIAKPVAAGIHKPEELIKEAISGNAPIYKAEEG SQATESADGLSIGQQIYKHLMSGVSHMLPFVIGGGIAIAIAFMLDQMLGVPQDQLAKL GSYNEIPALLKQIGDVAFGFMLPVFAGYIAYSISDRPGLVAGFVAGGVASVGGAGFLG ALVGGFLAGYAVELIKLALKKLPKTLDGIKVVLFYPVLSVLIVGLLMLLLNVPMSALN TWLNDFLNSLSGTNAVILGLLLGAMMAADLGGPINKAAYIFATGTLAASVATGGSAIM AATMAAGMVPPLATFVATLIFRNKFTAQERDAGLTNSILGASFITEGAIPFAAADPLR MIPSFIAGSAITGAIVMFLNIKVLAPHGGVFVIFLVSQPWFYIIAIIIGTLISAGLIG VLRKKPTV" misc_feature complement(2404790..2405239) /gene="fruA" /locus_tag="lmo2335" /note="Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) [Carbohydrate transport and metabolism, Signal transduction mechanisms]; Region: PtsN; COG1762" /db_xref="CDD:441368" misc_feature complement(2403353..2404756) /gene="fruA" /locus_tag="lmo2335" /note="Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism]; Region: FrwC; COG1299" /db_xref="CDD:440910" gene complement(2405241..2406164) /gene="fruB" /locus_tag="lmo2336" /db_xref="GeneID:984473" CDS complement(2405241..2406164) /gene="fruB" /locus_tag="lmo2336" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="fructose-1-phosphate kinase" /protein_id="NP_465859.1" /db_xref="GeneID:984473" /translation="MIYTITLNPSIDYIVQIDQLNLGGLNRMKQDYKLPGGKGINVSR VLNQLNVPSLATGFLGGFTGSFIKDWLQNEGVKTGFVTVKDDTRINIKLKHGEETEIN GLGPAISEKEINEFLKVMDKVTANDIVILSGSVPPSLGNDFYNKIIQICKEKKAEFMI DTTGQELLDALPNRPILIKPNHHELADLFGVKLGSVEELIPYGKKCLELGAQHVIVSM AGDGALLFTGEDVYFADALKGELKNSVGAGDSMIAGFVGTFDKTRDPVKAFAAGVATG GATAFSTDLAQKELIDELLPQVKITKITGRN" misc_feature complement(2405307..2406164) /gene="fruB" /locus_tag="lmo2336" /note="1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose...; Region: FruK_PfkB_like; cd01164" /db_xref="CDD:238570" misc_feature complement(order(2405769..2405771,2406000..2406002, 2406006..2406008,2406024..2406026,2406036..2406038)) /gene="fruB" /locus_tag="lmo2336" /note="putative substrate binding site [chemical binding]; other site" /db_xref="CDD:238570" misc_feature complement(order(2405418..2405420,2405424..2405426, 2405496..2405498,2405514..2405516,2405622..2405624, 2405628..2405630,2405682..2405684)) /gene="fruB" /locus_tag="lmo2336" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:238570" regulatory complement(2405247..2405252) /regulatory_class="ribosome_binding_site" /gene="fruB" /locus_tag="lmo2336" gene complement(2406161..2406913) /locus_tag="lmo2337" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986688" CDS complement(2406161..2406913) /locus_tag="lmo2337" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DeoR family transcriptional regulator" /protein_id="NP_465860.1" /db_xref="GeneID:986688" /translation="MLNAERKQLIMESIEKLGVIKLQELVEGLATSESTIRRDLIELE EQGLIQRVHGGAKLVKLHNQEPSMNEKSFKNIQSKKVIAAYCASLVEENDCIYLDAGS TTLELITHLANRNITVVTNGLTHIEELVRQNIDAYLLGGKMKVHTKAIIGAVALDNIK NYHFDKAFIGTNAMHPEHGYTTPDMEEAFVKRAAKERADRVFVVADHTKFNEVNFSKM FSIEEATIVTDYIPSAVKESFIQKTKIIEVEK" misc_feature complement(2406167..2406913) /locus_tag="lmo2337" /note="DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family [Transcription, Carbohydrate transport and metabolism]; Region: GlpR; COG1349" /db_xref="CDD:440960" regulatory complement(2406172..2406177) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2337" regulatory complement(2406921..2406926) /regulatory_class="ribosome_binding_site" regulatory 2407114..2407119 /regulatory_class="ribosome_binding_site" gene 2407128..2408453 /gene="pepC" /locus_tag="lmo2338" /db_xref="GeneID:984466" CDS 2407128..2408453 /gene="pepC" /locus_tag="lmo2338" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aminopeptidase" /protein_id="NP_465861.1" /db_xref="GeneID:984466" /translation="MQTELTFEQLENFSRKWRENPDKLVFQASIMKNGIKAATENPTS KVSIQPVFSHEVATDKVSNQQQSGRCWMFAALNTFRHKLNGTLGLKDFELSQNYTNFW DKLEKANYFLENIIETASEDEDSRLVSWLLDTPQQDGGQWDMLVSIIEKYGVVPKSAM PETFQSGKSADLNHLLNERLRTDAVILRKAFTEKKDTAGLKEEMLAEIYQLLVMTLGE PPKVFDFEYRNKDNEFKQELQITPKDFYERYVDMDLKNYIPLINAPTKDKPFNQAFTV DYLGNIVNGTPIKYLNVEMDVLKKAATDQIKDGETVWFGCDVGQLSEKTTGIMDTDIF LLNQTFGFKTAMTKAERLDYKHSMLTHAMVLTGVNVANGEVNRWKVENSWGEKIGNNG YFVASDAWMDEFTFQVVVHKKYLSKELIEAFNQEPIALKPWDPMGSLAL" misc_feature 2407137..2408438 /gene="pepC" /locus_tag="lmo2338" /note="Peptidase C1-like family; Region: Peptidase_C1_2; pfam03051" /db_xref="CDD:397262" misc_feature order(2407251..2407253,2407272..2407274,2407278..2407286, 2407611..2407616,2407797..2407799,2407803..2407805, 2407809..2407811,2407827..2407829,2408256..2408258) /gene="pepC" /locus_tag="lmo2338" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:238328" misc_feature order(2407317..2407319,2407335..2407337,2408208..2408210, 2408271..2408273) /gene="pepC" /locus_tag="lmo2338" /note="active site" /db_xref="CDD:238328" misc_feature 2408436..2408438 /gene="pepC" /locus_tag="lmo2338" /note="G bulge [active]" /db_xref="CDD:238328" gene complement(2408450..2408893) /locus_tag="lmo2339" /db_xref="GeneID:984799" CDS complement(2408450..2408893) /locus_tag="lmo2339" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465862.1" /db_xref="GeneID:984799" /translation="MIAVSACLAGIACRYDGKDKEITKIKQMVENGEAIPFCPEVAGG LPTPRNPAEIIGGDGKDVWLGHAKVVDSKGTDVTEEYKYGAKLTLAKMQDLGITKIIM KEKSPSCGSCAIYDGTFSGKIKDGTGVAAALFQMNGIKIISEFVF" misc_feature complement(2408462..2408890) /locus_tag="lmo2339" /note="2-thiouracil desulfurase; Region: 2-thiour_desulf; pfam04463" /db_xref="CDD:461320" regulatory complement(2408902..2408907) /regulatory_class="ribosome_binding_site" regulatory complement(2408932..2408956) /regulatory_class="terminator" gene complement(2408967..2409878) /locus_tag="lmo2340" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984465" CDS complement(2408967..2409878) /locus_tag="lmo2340" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465863.1" /db_xref="GeneID:984465" /translation="MKNYLSLSEEVKQAKAEGKAIVALESTIISHGMPYPQNVEMARD VEQIIRDNGAVPATIALIDGKIKIGLSDEELELFAKSSNVAKVSRRDIGYLIATKQLG ATTVAATMICAELAEIGIFVTGGIGGVHRGAETTMDVSADLEELAKTNVAVVCAGAKS ILDLNLTMEYLETKGVPVIGYQTDVLPAFYTRSSDVELTLRADTPEVIAESLKAKWDL QIEGGAVITNPIPEEFAMDEKVINDVIQTALKEAEENHIHGKDVTPFLLGKVKELTDG KSLEANIELVKHNALIGTQIAVAYQNI" misc_feature complement(2408970..2409875) /locus_tag="lmo2340" /note="Pseudouridine-5'-phosphate glycosidase (pseudoU degradation) [Nucleotide transport and metabolism]; Region: PsuG; COG2313" /db_xref="CDD:441887" gene complement(2409875..2410993) /locus_tag="lmo2341" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984892" CDS complement(2409875..2410993) /locus_tag="lmo2341" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar kinase" /protein_id="NP_465864.1" /db_xref="GeneID:984892" /translation="MENNKAKMNEKEEIIFNSIRKNPYISQQELADILDLSRPTVANL ISGLIKKGRILGKAYILNEAKQIVCIGGANVDRKFYIKDKAQLATSNPVRSTQSAGGV ARNVGENLGRLGKEVILLTACGTDSDWEAVKNASNTYMNLDYVTAFPSIATGSYTAVL ENNGDLLVALADMDAYDHLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSFAEIN SIPLVLVPVSSPKMSHLPERLDHVTWLICNRDESETHLDMTIENDEDWRLAAQKWLDL GVKNVIVTNGSKGAVAANKAEGTIFEPAIVIEDIVDVTGAGDAFCSAVIYAWLEGKTL QEILKAGSVNAARTLESEYTVRQNLSTSQLQKDLEEFK" misc_feature complement(2410832..2410951) /locus_tag="lmo2341" /note="Winged helix-turn-helix DNA-binding; Region: HTH_24; pfam13412" /db_xref="CDD:404317" misc_feature complement(2409941..2410798) /locus_tag="lmo2341" /note="YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time; Region: YeiC_kinase_like; cd01941" /db_xref="CDD:238916" misc_feature complement(order(2410040..2410042,2410049..2410051, 2410679..2410681)) /locus_tag="lmo2341" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238916" misc_feature complement(order(2409959..2409961,2409968..2409970, 2410034..2410036,2410043..2410048,2410055..2410057, 2410142..2410144,2410250..2410252)) /locus_tag="lmo2341" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:238916" regulatory complement(2409886..2409891) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2341" regulatory complement(2411005..2411010) /regulatory_class="ribosome_binding_site" gene complement(2411126..2411827) /locus_tag="lmo2342" /db_xref="GeneID:984459" CDS complement(2411126..2411827) /locus_tag="lmo2342" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="16S pseudouridylate synthase" /protein_id="NP_465865.1" /db_xref="GeneID:984459" /translation="MRLDKLLSHTGFGSRKEVKPLLKSGAVVVNGTIQKDSKTQVNPD KDQITVHGTPVVYQEFVYFMLHKPQNVVSATEDNVSETVIDLLAQEDTLTDPFPVGRL DKDTEGLLIITNDGTLAHNLLSPKKHIDKTYYAKIDGDVTAEDVEAFAAGIELDDGYT CKPARLEIITPNEIKVTIQEGKFHQVKRMFAARGKSVSYLKRISMGNLQLDESLALGE YRPLTEAELAILQNK" misc_feature complement(2411159..2411827) /locus_tag="lmo2342" /note="Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605 [Translation, ribosomal structure and biogenesis]; Region: RsuA; COG1187" /db_xref="CDD:440800" regulatory complement(2411834..2411839) /regulatory_class="ribosome_binding_site" regulatory complement(2411854..2411888) /regulatory_class="terminator" gene complement(2411900..2413222) /locus_tag="lmo2343" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984458" CDS complement(2411900..2413222) /locus_tag="lmo2343" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="nitrilotriacetate monooxygenase" /protein_id="NP_465866.1" /db_xref="GeneID:984458" /translation="MTRKETIQFGAIIHGVGGTTDGWRHPDINPAASTDLDFYKTRAK IAEQGLFSFVFIADGLFISEKSIPHFLNRFEPITILSALAESTENIGLVGTFSTSFTE PFTLARQLSSLDHISSGRAGWNLVTSPQEGAARNHSKKNLPTHSDRYTIAAEHLKVVR GLWNSWEEDAFTYNKETGEFFNPEKLHHLNHQGEYFQVEGPLNIGRSKQGEPVVFQAG ASSTGRDFAAQNAEAIFTHSDSLEEAVEFYRDVKSRAEKAGRNADEVRIFPGISPIVA DTLEEAEAKYTEFASLIPIENAVTYLARYFDDYDLSQFDLDAPFPDLGDIGKNAFQST TDRIKKEAKERHLTLRQVATEAATPKTPFIGTKEQVADLIEVWFQNEAADGFIIASDI PGTFETFVEQVIPLLQSRGLYRNEYPATTLRGNLGLTIPQNKQAVETK" misc_feature complement(2411948..2413198) /locus_tag="lmo2343" /note="FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; Region: FMN_nitrolo; TIGR03860" /db_xref="CDD:274819" misc_feature complement(order(2412557..2412562,2412779..2412781, 2412845..2412847,2413004..2413006,2413175..2413177, 2413187..2413189)) /locus_tag="lmo2343" /note="active site" /db_xref="CDD:238528" misc_feature complement(2412935..2412940) /locus_tag="lmo2343" /note="non-prolyl cis peptide bond [active]" /db_xref="CDD:238528" gene complement(2413219..2413485) /locus_tag="lmo2344" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984568" CDS complement(2413219..2413485) /locus_tag="lmo2344" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465867.1" /db_xref="GeneID:984568" /translation="MANVVVWSKEGCHYCKDVKDFLIEQKIVFQDIDVTDHDYLREVL QAKYGICHVPVVEIGNIENGTYQAVTEIGLEHLEKALFEKGEVK" misc_feature complement(2413243..2413479) /locus_tag="lmo2344" /note="NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase...; Region: NrdH; cd02976" /db_xref="CDD:239274" misc_feature complement(order(2413441..2413443,2413450..2413452)) /locus_tag="lmo2344" /note="catalytic residues [active]" /db_xref="CDD:239274" regulatory complement(2413231..2413236) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2344" gene complement(2413478..2414473) /locus_tag="lmo2345" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987930" CDS complement(2413478..2414473) /locus_tag="lmo2345" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465868.1" /db_xref="GeneID:987930" /translation="MTIRFSILDQSIINPGEQPSEALRNTVELAQLAEQLGYHRFWVA EHHNSDEIAGAAPEVLLGYIAAKTSTIKLASGGIMLQHYSPYKVAEQFHVLENLAPGR ISLGVGKAPGGFQPATDALQKDFVKPTRTFDAKLEELVDFVTRHSDTTIAAKPLPENK PEIFLLGGSASSAKQAAKLGISFVFAYFINGEEAVLKEARELFEQYQINTKASFQLAP IVVVAETKIAADRHIPERESIKVELADGRRVNVGSREQAEAYVKDIDQTYRFITQRIG AITGTKQEVGVEIKRLSKEYNIQDFVVLTPVKSAEIKRYSYQLLSESIKEEVVHG" misc_feature complement(2413508..2414461) /locus_tag="lmo2345" /note="luciferase family oxidoreductase, group 1; Region: oxido_grp_1; TIGR03558" /db_xref="CDD:274646" regulatory complement(2413495..2413500) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2345" gene complement(2414470..2415249) /locus_tag="lmo2346" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984455" CDS complement(2414470..2415249) /locus_tag="lmo2346" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter ATP-binding protein" /protein_id="NP_465869.1" /db_xref="GeneID:984455" /translation="MITIKNIQKSFGENKVLKGIDLTVKKGEVVTILGPSGSGKTTFL RCLNLLERPENGEISMHDQIINCKKPSKKEVLQLRKNTAMVFQQYNLFSHKTVIQNVM EGLTVARKIPKKIAHEIAERELTKVGLADKLSAYPSQLSGGQKQRVGIARALAINPDV ILFDEPTAALDPELVGEVLEVMLEIARAGATMIVVTHEMEFAKRVADQVVFMDGGLIV EQGTPDEVFNHTKEERTKRFLHRVSADYLYEIKEVKKERVI" misc_feature complement(2414524..2415249) /locus_tag="lmo2346" /note="ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]; Region: GlnQ; COG1126" /db_xref="CDD:440743" regulatory complement(2414481..2414486) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2346" gene complement(2415246..2415953) /locus_tag="lmo2347" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984476" CDS complement(2415246..2415953) /locus_tag="lmo2347" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter permease" /protein_id="NP_465870.1" /db_xref="GeneID:984476" /translation="MPLDVPFIGTAVMAMLKTIPLTLAMTFFPILFGFIIAIGLTLIR MYHVRFLEPIAKFYVSFFRSTPAILHIMLIYLGIPLLVDFLSKSFGLGISANKIPVVV FVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGYTHGQAIRKVLLPQAFMIALP NFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLEAFIGAALIYWFLTILIEA INYILEKNIAKYRGGTV" misc_feature complement(2415261..2415953) /locus_tag="lmo2347" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" regulatory complement(2415256..2415261) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2347" regulatory complement(2415961..2415966) /regulatory_class="ribosome_binding_site" gene complement(2415967..2416683) /locus_tag="lmo2348" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984447" CDS complement(2415967..2416683) /locus_tag="lmo2348" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter permease" /protein_id="NP_465871.1" /db_xref="GeneID:984447" /translation="MDKAFDVKMIADFIPTLAGYLPITLYILALSLIFGFILGVLLSL PRIYKVPILDQFARVYISFFRGTPIMVQLFIVFYGIPALSSVFGIDLSQMDPLYAAIA TYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSSRQTFLRIILPQALYQALPNFGN LVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALEVYISLSIIYYLTAVLLEYSFKW IEKRVKKENTRFTSIFDIEL" misc_feature complement(2416009..2416674) /locus_tag="lmo2348" /note="ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Region: HisM; COG0765" /db_xref="CDD:440528" regulatory complement(2416693..2416698) /regulatory_class="ribosome_binding_site" gene complement(2416705..2417514) /locus_tag="lmo2349" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985790" CDS complement(2416705..2417514) /locus_tag="lmo2349" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter substrate-binding protein" /protein_id="NP_465872.1" /db_xref="GeneID:985790" /translation="MKKKYGILALALTAALTLSACGGKEEPEAANQKVQTITVGTGTQ FPNVCFLDENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLVSLGAGKVDIVAHQ MEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALVLK KINEEQGNNFEIAYEGQGSNDTANQLKTGRADATISTPFAVDFQNKTSAIKEKVVGDV LSNAKVYFMLGKDETKLSKKVDEALQSIIDDGTLKKLSEKWLGADYSKEQY" misc_feature complement(2416720..2417412) /locus_tag="lmo2349" /note="Substrate binding domain of an ABC transporter TcyJKLMN; the type 2 periplasmic binding protein fold; Region: PBP2_TcyK; cd13710" /db_xref="CDD:270428" misc_feature complement(order(2416927..2416929,2416933..2416935, 2416969..2416971,2416978..2416980,2417053..2417058, 2417065..2417067,2417188..2417190,2417209..2417214, 2417263..2417265,2417380..2417385,2417389..2417391)) /locus_tag="lmo2349" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270428" regulatory complement(2417522..2417527) /regulatory_class="ribosome_binding_site" gene complement(2417531..2418067) /locus_tag="lmo2350" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984858" CDS complement(2417531..2418067) /locus_tag="lmo2350" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465873.1" /db_xref="GeneID:984858" /translation="MTEDIFRVATVDDAPEFLELLSSAFQSVKELGIDWPSTNADLAM VTENIVNSSAFVLERNGKLISTITVRFPWESSSPPSKYPFVWWFATAPELAGQGIGDK LLTYVEERVLRDTLKAPALTLGTSARKHPWLLDMYLRRGYEVYFEHEEDGDVGVMMRK ILIPEKFDAALLGIPSWT" misc_feature complement(2417582..2418052) /locus_tag="lmo2350" /note="Predicted N-acetyltransferase YhbS [General function prediction only]; Region: yhbS; COG3153" /db_xref="CDD:442387" regulatory complement(2418078..2418083) /regulatory_class="ribosome_binding_site" gene complement(2418083..2418628) /locus_tag="lmo2351" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984660" CDS complement(2418083..2418628) /locus_tag="lmo2351" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="FMN reductase" /protein_id="NP_465874.1" /db_xref="GeneID:984660" /translation="MGKVTIIAGGIKTESRLTGLTQLAANELVTNGLEVNIIEVHKIN AEALVTADFAHSDIQLANSEIESSSGVIIATPIFKAAYSGVLKAYLDLLPLKALKGKV VLPLGLGGSNGHLLALQYALDPVLKELGAETILKGQFTVDKQIERLGDGLYEIESSAK ERLDIALGQFISLLNQQSVEV" misc_feature complement(2418119..2418622) /locus_tag="lmo2351" /note="NADPH-dependent FMN reductase; Region: FMN_red; cl00438" /db_xref="CDD:469770" regulatory complement(2418636..2418641) /regulatory_class="ribosome_binding_site" regulatory 2418858..2418863 /regulatory_class="ribosome_binding_site" gene 2418871..2419770 /locus_tag="lmo2352" /db_xref="GeneID:986168" CDS 2418871..2419770 /locus_tag="lmo2352" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="NP_465875.1" /db_xref="GeneID:986168" /translation="MEFRTIKTFYTVVNTGSFQRAAEVLNYSQPTISMRIKQLEQDLD VQLFERGKTLKLTHAGRLFYERAGQLIAQYEVLDHTIFDLKNGNAGLIKVGISEPSAS LVFPKILKTFLADFPKLMVNVSVDDANTCSQKLIDGEIDFAICGEPELILENFYFPFF HDTLDLIVSESHPLASRTSVELRDLRDECFIFTPANCPIRIQIEQHLKRAIGSDYKKM ELTSSMSHKYFVRENVGVSIFTSTAHSELLDGTVRIPIENLPISPPIGLLTNQKEKDF DSTTKELIDRIIYYFDDKKRQLG" misc_feature 2418871..2419731 /locus_tag="lmo2352" /note="DNA-binding transcriptional regulator, LysR family [Transcription]; Region: LysR; COG0583" /db_xref="CDD:440348" regulatory complement(2419746..2419788) /regulatory_class="terminator" regulatory 2419755..2419797 /regulatory_class="terminator" gene complement(2419797..2421749) /locus_tag="lmo2353" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984445" CDS complement(2419797..2421749) /locus_tag="lmo2353" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Na+/H+ antiporter" /protein_id="NP_465876.1" /db_xref="GeneID:984445" /translation="MEIFELILLMLSAVFLSNVLSRFLPSIAVPLIQVVLGIILAIPL GDHTMDLNPELFLLLFMAPILFNDGASTDKKSLWKNRKAILSLSIGLVFVTVGVLGAF IHYLIPAIPFAAAFALAAALAPTDAVAVGALAEKVRVPHKIMHILEGESLINDASGLV SFQFAVLALVTGTFSFMSAGTSFLLLSLGGIALGAILSLLKIMLMRGLRQLGIENMTS FMLMEILLPFLIFMVAEKVGVNGILAVVSGGMVHSFSYKGLNPEIAQLNLLSKNTWSV IIFSLNGLVFILLGTQLPQILMTIWQDANIQKGMLFVYIIGITFLLLGLRFLWILFFR NYEENPKVDLVSRLKNTFLYTVAGVRGTITLVSALSLPFVLGNGNAFPERDLLIFIAA GVIITTLLLANFTLPLFADKKDKVTADHTTDIVLLRDIVQQLQAYKTDENAVEMNKVL NMYNNRIFSLMEHKEVNATEKELRRLTQEWQLENTRRLVFERKIDTGVGLSHMMRLGK RLYVQTRAEKYRARMRYRQLLSHRFRDFRFVPLTFEERRKEIAKLQNENNLFVMQKLQ DLDSNEYNPEIISLYLMNFERALGRGKNKKESNDEALQTTIDLASQIERETIQRYFEK GTITRKEMKVYRDNLLAIEANMQLEF" misc_feature complement(2420154..2421749) /locus_tag="lmo2353" /note="NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism]; Region: NhaP; COG0025" /db_xref="CDD:439796" regulatory complement(2421759..2421764) /regulatory_class="ribosome_binding_site" gene complement(2421878..2423476) /locus_tag="lmo2354" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984444" CDS complement(2421878..2423476) /locus_tag="lmo2354" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465877.1" /db_xref="GeneID:984444" /translation="MKLWKNATFYQMTAEGDQVSAVLTENGQICAVGEAMDLEKQYVA NITETIDLEGKVVFPGFVDAHIHLLWYGQALERLNLNQTTTKKEALALIAERTKQIAS DEWLFVEGYDENKWSDEQTLISLADLDEVSQTNPILVRRIDYHSVSINSALQEKIADF SETGFDGGGEIVRDKTGEFIGVLRDNATTMAIDSFPAATPSELSAWLEIAITDLWSKG ITGAHSEDLHYFTGFASTLAAFRNTIGSNKMPFRAHLLVHHAELAAFSASNESFVSGD AFLELGAMKIFYDGTVGSRTALMSAGYADNPSEKGLQIHSDQAFEDLVKAARKAGLPV AIHILGDQAFANVIRTLRANPPKEGQYDRLIHTPWLTEALIEEATGLPVLFDIQPQFM ASDLPWALEVLGDNHPPLAFAWKTLLQAGFPLAGGSDAPIEVPNPFWGIHAAVTRTAN ADLDGVGYWPEQALTVFEAIQLYTKGAAFASYKTTTRGQIAPGFVADFTILAEDPFQM KQAELRQVSVVMTVVNEQIVYQKK" misc_feature complement(2421881..2423470) /locus_tag="lmo2354" /note="Predicted amidohydrolase YtcJ [General function prediction only]; Region: YtcJ; COG1574" /db_xref="CDD:441182" gene complement(2423480..2424721) /locus_tag="lmo2355" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985985" CDS complement(2423480..2424721) /locus_tag="lmo2355" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="multidrug resistance protein" /protein_id="NP_465878.1" /db_xref="GeneID:985985" /translation="MTKWLPKDLWIVIIGMVLLYTGLSFIWPFNMIYMTQELGMSTTD ASLVLLINSGVGIVSSIIGGIIFDRFSGFISLTIGTIILVLSTASLCFFHGFPFFIWN LWAVGIAMGMVFSGLYAAAGLTHPTGGRTGFNAIYVAQNIGVAVGPLLAGLLAKQGMS HVYIGSFVFAIAFAGYFFFFFHKIDWKSERVSAETKHRKKGAKREFPTKLALCSFILL LLTYLLCQLPHVQWQSNLSTYMTEIKGVTSSEYGNLWSLNGALIVLGQLVLIPVVNRF KKYLLVQIYIGIFLFILSFVVAMNASVYSGFVLGMIFLTLGEMFAWPAIPTIAYQLAP KGAAGLYQGLVNGMATAARMLAPFIGAIVVQNLGGIKALFIGAFILLGCALISITLQQ ILQKKDQQEKAALKISVNQGE" misc_feature complement(2423549..2424697) /locus_tag="lmo2355" /note="Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_MdtH_MDR_like; cd17329" /db_xref="CDD:340887" misc_feature complement(order(2423663..2423665,2423672..2423677, 2423684..2423689,2423696..2423698,2423744..2423746, 2423756..2423758,2423768..2423773,2423924..2423926, 2423936..2423938,2424020..2424022,2424029..2424037, 2424044..2424049,2424056..2424058,2424290..2424292, 2424299..2424304,2424311..2424313,2424368..2424370, 2424377..2424385,2424389..2424394,2424542..2424544, 2424641..2424643,2424650..2424655,2424662..2424667)) /locus_tag="lmo2355" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340887" regulatory complement(2423485..2423490) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2355" regulatory complement(2424732..2424737) /regulatory_class="ribosome_binding_site" regulatory complement(2424896..2424930) /regulatory_class="terminator" gene complement(2424922..2425533) /locus_tag="lmo2356" /db_xref="GeneID:984439" CDS complement(2424922..2425533) /locus_tag="lmo2356" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2356" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465879.1" /db_xref="GeneID:984439" /translation="MEERFTTELMFTLTNNPKFQEVAELVYWNEEEIVHCPENNEYVY AIDEGSVTQCAARNSSWGKGSILGFTREETKIQPLSKTVAWKIPLTYVKDILKSMGKV KVADLTVIEKNFLDRNEIDCIQWFIQEMPLRLHTTSWKVALDFFRQEMMQAVPKELCA FQVKELKQQHILYELGYYLEIDVLQFHNYLRDLAYNKVLQKNN" regulatory complement(2425542..2425547) /regulatory_class="ribosome_binding_site" regulatory complement(2425684..2425729) /regulatory_class="terminator" gene complement(2425723..2426253) /locus_tag="lmo2357" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984422" CDS complement(2425723..2426253) /locus_tag="lmo2357" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465880.1" /db_xref="GeneID:984422" /translation="MRKLYTYFVLILGVAMIGLGIYLMFNPSTSLQALTIFIGIILVL NGINEVISYFGEHKYWSISKWIMLDGILSILIGGFAIFESNMAERVFIIIFAIWILAS AILRILTAFAVKGFPGWTLLLIMGIIGLIIAIISLFTNMLVAIAIGIILGIFFIFQGI TCLSLWWVIRKGESRK" misc_feature complement(2425729..2426235) /locus_tag="lmo2357" /note="Acid resistance membrane protein HdeD, DUF308 family [General function prediction only]; Region: HdeD; COG3247" /db_xref="CDD:442478" regulatory complement(2426262..2426267) /regulatory_class="ribosome_binding_site" gene complement(2426270..2427001) /locus_tag="lmo2358" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984434" CDS complement(2426270..2427001) /locus_tag="lmo2358" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="N-acetylglucosamine-6-phosphate isomerase" /protein_id="NP_465881.1" /db_xref="GeneID:984434" /translation="MKLIRTKTYKEMSQEALEVVEQVINENDNPVINTTTGASFDGMF EGLVKGINAGEIPIEKVFLMNLDEYVAKRDASFTVYTYMHQKFYDLINKMPKRVELLD GSLADFTDEIARYKKILAENERDLQILGLGVNGHLGANEPGTPFDARLFLADSDESTI KSTIMYNNLKEDEAPSQMLTLGLADMMDAKQILVTASGERKAEAVKGLLEGPIDENCP ASILRNHPNVVFIIDEAAGSLLTNH" misc_feature complement(2426282..2426974) /locus_tag="lmo2358" /note="Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium. The reaction is an aldo-keto isomerization coupled with an amination or deamination. It...; Region: GlcN6P_deaminase; cd01399" /db_xref="CDD:238693" misc_feature complement(order(2426399..2426401,2426507..2426509, 2426588..2426590,2426594..2426596,2426609..2426614, 2426801..2426806,2426885..2426896)) /locus_tag="lmo2358" /note="active site" /db_xref="CDD:238693" misc_feature complement(order(2426327..2426335,2426357..2426377, 2426540..2426542,2426564..2426569,2426573..2426575)) /locus_tag="lmo2358" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:238693" misc_feature complement(order(2426540..2426551,2426567..2426572)) /locus_tag="lmo2358" /note="allosteric site [active]" /db_xref="CDD:238693" misc_feature complement(order(2426477..2426485,2426492..2426494, 2426498..2426527,2426534..2426536)) /locus_tag="lmo2358" /note="active site lid [active]" /db_xref="CDD:238693" misc_feature complement(order(2426282..2426293,2426300..2426302, 2426393..2426395,2426405..2426407,2426519..2426521)) /locus_tag="lmo2358" /note="hexamer (dimer of trimers) interface [polypeptide binding]; other site" /db_xref="CDD:238693" regulatory complement(2427008..2427013) /regulatory_class="ribosome_binding_site" gene complement(2427045..2427890) /locus_tag="lmo2359" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984722" CDS complement(2427045..2427890) /locus_tag="lmo2359" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465882.1" /db_xref="GeneID:984722" /translation="MTKKIVFVDVDGTLVNDDGLVPESARTAIIKARNNGHQVYLCTG RSKPELYESIISIGFDGIIGAGGGYIEVDDEIIYHKKVANEDVVHMVDFFTEKQLDFY LESNGGLFASPNLESHLDRLVYGDVENDPIAREKKANNPHPFMESLTYGETNLYRTDV NKACFLENKAVPFEEIKKEFSGKFEVMHCTVPVFGDDSGELMVPDIHKATAIEFLLKH TGGEKKATIGIGDGMNDAEMLTYCKTGIAMGNAKEELKKLADDVTKSVDEDGLYASFL KHGLL" misc_feature complement(2427075..2427878) /locus_tag="lmo2359" /note="Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; Region: Cof-subfamily; TIGR00099" /db_xref="CDD:272905" regulatory complement(2427897..2427902) /regulatory_class="ribosome_binding_site" regulatory complement(2427959..2427998) /regulatory_class="terminator" gene complement(2428010..2430793) /locus_tag="lmo2360" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984433" CDS complement(2428010..2430793) /locus_tag="lmo2360" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transmembrane protein" /protein_id="NP_465883.1" /db_xref="GeneID:984433" /translation="MDMVKNEWKKLFKNKILLLSFVVILFIPLLYASFFLKSVWDPYG KTGDLPVAVVNNDKPVDYNGQTMDVGDQLVTKLKSNKELDWNFLSKEEAEQGLKDGKY YMIVTIPKDFSKNAASVLDKDPKKMELSYKTNGSLNYLGQVVSEQGAKQLKSEVSAEV TKSYAEAIFDKIKESGDGFAQAADGSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFK DGANTLEVGLKTYTDGVNTAAAGGDKLNAGVSTLAAGVGPLKDGVAALDGGATKLASG VSTYTSGVDTLAGGINQAYTGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLD SLVDGSNKLSAGLKELDGNLTDKQGKIAQLKQGMNDLQQGIDQLNQSVNGEDAALAKQ LATLQKSLSDLQNGLTFIKSNANFDAEAIKSKINATAGVSAEDKQKIIDAIQADLDKE TQKSATQVATVEQLQSGLSGLDLAAIQTQVTELQTGVAKISAGYQAVHGGTNEAFNSI HQAINGSGSQTLLGGANQLTAGLKSAQAGSAKLVAGTNQLNSQVPTLTSGVGQLAAGS ASMENGLSKLNDGGNKLASNSGALRSGATELQGGTNQLAAKVPTLAGGVNQLQAGSNQ LAGGLNQLSANSPKLVSGVGQLADGSSKIADGSSKLANGSFQLGDGLTKLTDGSTELT DKLADGAQQVKDTKATDKTFNMIAAPTKLAHNEYTHVSNYGHALAPYVLSLALYVGAL VFNFIMPIRRVSMEGQPAYKWWLSKLSLGFVAAVAMALLEGGIMIALGLRPDSIVEFF GTAIITALAYMFLIMLLAMTFDNPGRFIAMVLLIVQLAGSGGTFPMPLTGWFFNLIHP FLPMTYSIYAFRESLAAGMGPNVYSMSMLILTIIMVACVGLLYLSMSHLKKRHDAHES ALDDNQKLMALEN" misc_feature complement(2430287..2430778) /locus_tag="lmo2360" /note="YhgE/Pip N-terminal domain; Region: pip_yhgE_Nterm; TIGR03061" /db_xref="CDD:274413" misc_feature complement(<2429090..2429866) /locus_tag="lmo2360" /note="Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown]; Region: CwlO1; COG3883" /db_xref="CDD:443091" misc_feature complement(2428847..2428930) /locus_tag="lmo2360" /note="X-X-X-Leu-X-X-Gly heptad repeats; Region: xxxLxxG_by_4; TIGR03057" /db_xref="CDD:274412" misc_feature complement(2428073..2428687) /locus_tag="lmo2360" /note="YhgE/Pip C-terminal domain; Region: pip_yhgE_Cterm; TIGR03062" /db_xref="CDD:274414" gene complement(2430826..2431296) /locus_tag="lmo2361" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984432" CDS complement(2430826..2431296) /locus_tag="lmo2361" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465884.1" /db_xref="GeneID:984432" /translation="MKLSKSMDQVFCIMTMLYTQKVDVPISSVTIHHRLRDSSPSYIS KILRKLVVSGLINSVSGNNGGFTLAKDPEEINLLDIVEAVEGKIDTYPDSDLIHTVFS DYHEFAESGIHTITSAFRNADKEYANYLYSQKLSVLVEQVIGKERTTIIDWNEA" misc_feature complement(2430874..2431290) /locus_tag="lmo2361" /note="Iron-dependent Transcriptional regulator; Region: Rrf2; pfam02082" /db_xref="CDD:396591" regulatory complement(2431305..2431310) /regulatory_class="ribosome_binding_site" regulatory 2431673..2431678 /regulatory_class="ribosome_binding_site" gene 2431688..2433211 /locus_tag="lmo2362" /db_xref="GeneID:984369" CDS 2431688..2433211 /locus_tag="lmo2362" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid antiporter" /protein_id="NP_465885.1" /db_xref="GeneID:984369" /translation="MSKQAKSLTLFGFFAITASMVMTVYEYPTFATSGFHLVFFLLLG GFLWFLPVALCAAEMATVDGWQEGGIFSWVGNTLGERFGFAAIFFQWFQITVGFVTMI YFILGALSYVFDFPALESNPFIKFIGVLVIFWGLTFSQLGGTKNTAKIAKFGFIIGIL IPAIILFILGIAYVAGGNPLHVTFSKEAFIPDFSKASTLVIFVSFILAYMGVEASASH VNEMTNPKRDYPLAMIMLVILAIALNTIGGLTISAVLPLKDLSLSSGVVQTFQALILH FGSGLGWAVKLIAIMIALGVMGEVSAWVVGPSRGMYTAAEQGLLPEKMKKVNKHGVPV PLIMVQGVVVTIWAAILTFGGGGNNLSFLTAISLTVVIYLVGYLLFFIGYLVLIFKKS SLKRTYQIPGGKIVKVIVALIGLVTSIFALCISFVPPASIAAKSDTTYMVILSISFIV TVLIPFIIYAVHDKKDITPKDITHLDSSDINKFTHPRARGEHIINPDEKHIMNQDKL" misc_feature 2431697..2433193 /locus_tag="lmo2362" /note="glutamate:gamma-aminobutyrate antiporter; Region: 2A0307_GadC; TIGR00910" /db_xref="CDD:129988" regulatory 2433210..2433215 /regulatory_class="ribosome_binding_site" gene 2433224..2434618 /locus_tag="lmo2363" /db_xref="GeneID:985123" CDS 2433224..2434618 /locus_tag="lmo2363" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glutamate decarboxylase" /protein_id="NP_465886.1" /db_xref="GeneID:985123" /translation="MLYSKENKESYLEPVFGSSAEDRDIPKYTLGKEPLEPRIAYRLV KDELLDEGSARQNLATFCQTYMEDEATKLMSETLEKNAIDKSEYPRTAELENRCVNII ADLWHAPKDQKFMGTSTIGSSEACMLGGMAMKFAWRKRAEKLGLDIYAKKPNLVISSG YQVCWEKFCVYWDIDMRVVPMDKEHMQLNTDQVLDYVDEYTIGVVGILGITYTGRYDD IYALNEKLEEYNSKTDYKVYIHVDAASGGFFTPFVEPDIIWDFRLKNVISINTSGHKY GLVYPGIGWVLWKDESYLPEELIFKVSYLGGEMPTMQINFSRSASHIIGQYYNFLRYG FEGYRTIHQKTSDVAQYLAHAVEQTGYFDIFNDGSHLPIVCYKLKDDANVNWTLYDLA DRLQMRGWQVPAYPLPKSLENIIIQRYVCRADLGFNMAEEFIQDFQASIQELNNAHIL FHDTQQSGVHGFTH" misc_feature 2433263..2434558 /locus_tag="lmo2363" /note="glutamate decarboxylase; Region: Glu-decarb-GAD; TIGR01788" /db_xref="CDD:130848" misc_feature order(2433587..2433592,2433599..2433601,2433842..2433844, 2433947..2433949,2433956..2433958,2434037..2434039, 2434046..2434048) /locus_tag="lmo2363" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99743" misc_feature 2434046..2434048 /locus_tag="lmo2363" /note="catalytic residue [active]" /db_xref="CDD:99743" regulatory 2434625..2434660 /regulatory_class="terminator" gene complement(2434627..2434866) /locus_tag="lmo2364" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984429" CDS complement(2434627..2434866) /locus_tag="lmo2364" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465887.1" /db_xref="GeneID:984429" /translation="MHEKMFNSVEDLNRLLEESDEPTIVLCNPNCELELKEAVEGTII PISLAFFDRDLEDVEEVIQSLRIKEHEKRLAYLRG" regulatory complement(2434872..2434877) /regulatory_class="ribosome_binding_site" gene complement(2435023..2436141) /locus_tag="lmo2365" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984424" CDS complement(2435023..2436141) /locus_tag="lmo2365" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="RofA family transcriptional regulator" /protein_id="NP_465888.1" /db_xref="GeneID:984424" /translation="MLTNFIEKDIKRKCLICDFILKNKHTNLDEIAEYMGTSRVTVRS DIHALNEELDGLILIQMKECADNWVYQCQLQNGVTERKVLYKLYDNSMFLKCVAFFVT NVEENKFTDFMDTYFISHSHAYRLKHKVEEFLREIDLKLDNNRITGKEYRVRYLIALL QAEYGVLIYPLLDEEKQMIDNFMATLNLLINIDTLAHNAEGHAYFRSLISMVFKRDIP TSAIILDEQCQKYIESSRFLDIVQKSSKETLEKELGQEFSYNDYLYLMLIYYSTNFSI IDASMKKVELEQFDELIMKNADLQSLVDLFEEYFGAEVVNHSLFRAALCYFLKKTLFN LQGLIPSNERLLDKKYQPLYLVVKNVLKRWNENSGRRV" misc_feature complement(2435950..2436123) /locus_tag="lmo2365" /note="M protein trans-acting positive regulator (MGA) HTH domain; Region: HTH_Mga; pfam08280" /db_xref="CDD:311953" misc_feature complement(<2435026..2436087) /locus_tag="lmo2365" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" regulatory complement(2436148..2436153) /regulatory_class="ribosome_binding_site" gene complement(2436493..2436576) /locus_tag="lmot46" /db_xref="GeneID:3167566" tRNA complement(2436493..2436576) /locus_tag="lmot46" /product="tRNA-Leu" /db_xref="GeneID:3167566" gene complement(2436622..2436695) /locus_tag="lmot47" /db_xref="GeneID:3167567" tRNA complement(2436622..2436695) /locus_tag="lmot47" /product="tRNA-Cys" /db_xref="GeneID:3167567" gene complement(2436715..2436786) /locus_tag="lmot48" /db_xref="GeneID:3167568" tRNA complement(2436715..2436786) /locus_tag="lmot48" /product="tRNA-Gly" /db_xref="GeneID:3167568" gene complement(2436792..2436863) /locus_tag="lmot49" /db_xref="GeneID:3167569" tRNA complement(2436792..2436863) /locus_tag="lmot49" /product="tRNA-Gln" /db_xref="GeneID:3167569" gene complement(2436893..2436965) /locus_tag="lmot50" /db_xref="GeneID:3167570" tRNA complement(2436893..2436965) /locus_tag="lmot50" /product="tRNA-His" /db_xref="GeneID:3167570" gene complement(2436981..2437054) /locus_tag="lmot51" /db_xref="GeneID:3167571" tRNA complement(2436981..2437054) /locus_tag="lmot51" /product="tRNA-Trp" /db_xref="GeneID:3167571" gene complement(2437062..2437145) /locus_tag="lmot52" /db_xref="GeneID:3167572" tRNA complement(2437062..2437145) /locus_tag="lmot52" /product="tRNA-Tyr" /db_xref="GeneID:3167572" gene complement(2437166..2437238) /locus_tag="lmot53" /db_xref="GeneID:3167573" tRNA complement(2437166..2437238) /locus_tag="lmot53" /product="tRNA-Phe" /db_xref="GeneID:3167573" gene complement(2437243..2437318) /locus_tag="lmot54" /db_xref="GeneID:3167574" tRNA complement(2437243..2437318) /locus_tag="lmot54" /product="tRNA-Asp" /db_xref="GeneID:3167574" gene complement(2437325..2437398) /locus_tag="lmot55" /db_xref="GeneID:3167575" tRNA complement(2437325..2437398) /locus_tag="lmot55" /product="tRNA-Met" /db_xref="GeneID:3167575" gene complement(2437420..2437495) /locus_tag="lmot56" /db_xref="GeneID:3167576" tRNA complement(2437420..2437495) /locus_tag="lmot56" /product="tRNA-Val" /db_xref="GeneID:3167576" gene complement(2437552..2437623) /locus_tag="lmot57" /db_xref="GeneID:3167577" tRNA complement(2437552..2437623) /locus_tag="lmot57" /product="tRNA-Glu" /db_xref="GeneID:3167577" gene complement(2437657..2437745) /locus_tag="lmot58" /db_xref="GeneID:3167578" tRNA complement(2437657..2437745) /locus_tag="lmot58" /product="tRNA-Ser" /db_xref="GeneID:3167578" gene complement(2437752..2437827) /locus_tag="lmot59" /db_xref="GeneID:3167579" tRNA complement(2437752..2437827) /locus_tag="lmot59" /product="tRNA-Asn" /db_xref="GeneID:3167579" gene complement(2437842..2437951) /locus_tag="lmor13" /db_xref="GeneID:984423" rRNA complement(2437842..2437951) /locus_tag="lmor13" /product="5S ribosomal RNA" /db_xref="GeneID:984423" gene complement(2438032..2440962) /locus_tag="lmor14" /db_xref="GeneID:984421" rRNA complement(2438032..2440962) /locus_tag="lmor14" /product="23S ribosomal RNA" /db_xref="GeneID:984421" gene complement(2441135..2441210) /locus_tag="lmot60" /db_xref="GeneID:3167580" tRNA complement(2441135..2441210) /locus_tag="lmot60" /product="tRNA-Ala" /db_xref="GeneID:3167580" gene complement(2441257..2441330) /locus_tag="lmot61" /db_xref="GeneID:3167581" tRNA complement(2441257..2441330) /locus_tag="lmot61" /product="tRNA-Ile" /db_xref="GeneID:3167581" gene complement(2441458..2443003) /locus_tag="lmor15" /db_xref="GeneID:984419" rRNA complement(2441458..2443003) /locus_tag="lmor15" /product="16S ribosomal RNA" /db_xref="GeneID:984419" gene complement(2443368..2444126) /locus_tag="lmo2366" /db_xref="GeneID:984418" CDS complement(2443368..2444126) /locus_tag="lmo2366" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DeoR family transcriptional regulator" /protein_id="NP_465889.1" /db_xref="GeneID:984418" /translation="MLSIERKRAIVQYVKSRKIATVSELAKHFEVHEATIRRDLTSLE KDKKLKRTHGGVMIEEKVVSEPNWKKRSEVRYEEKQRIATLAATMVKDGDTIILDAGT TTGHIATALKDRSKLTVITNDINVASIMRFSPSKVIVTGGVIYPETFILNGMITSGTL QSIHVHKAFVTTPALDIDKGLMHYDEYLIPAKQQMLHSADEVILVTDHTKFGRISLYK YAALDEISSIITGKEIDPVLKEQFEEKGMQIYTT" misc_feature complement(2443380..2444126) /locus_tag="lmo2366" /note="DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family [Transcription, Carbohydrate transport and metabolism]; Region: GlpR; COG1349" /db_xref="CDD:440960" regulatory complement(2444134..2444139) /regulatory_class="ribosome_binding_site" regulatory complement(2444183..2444216) /regulatory_class="terminator" gene complement(2444231..2445583) /gene="pgi" /locus_tag="lmo2367" /db_xref="GeneID:984404" CDS complement(2444231..2445583) /gene="pgi" /locus_tag="lmo2367" /EC_number="5.3.1.9" /experiment="EXISTENCE:[PMID:19448609]" /note="functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate isomerase" /protein_id="NP_465890.1" /db_xref="GeneID:984404" /translation="MTHIKFDYSKALRFFEERELDYLEPAVKAAHDSLHNGTGAGNDA LGWINLPTDYDKEEFARIKKATEKIHSDSDVLIVIGIGGSYLGARAAIETLNHSFYNV LEKGARKTPQVFFAGNSISSSYLHDLIEVVGDRDFSVNVISKSGTTTEPAIAFRVFKE LLIKKYGEEGAKKRIYATTDKAKGALKTLSDNEGYETFVVPDDVGGRFSVLTAVGLLP IAVSGVDIDALMNGAAAASKDFDKPELKNNIAYQYAAARNVLYRKGKVTELLISYEPG LQYFNEWWKQLFGESEGKDKKGIYPSSANFSTDLHSIGQYIQDGRRNLFETVIKVDKP RHNLTINKEDVDLDGLNYLAGETVDFVNTKAFEGTLLAHTDGEVPNFVVEVPELDAYT FGYLVYFFEKAVAISGYLNGVNPFDQPGVEAYKANMFALLGKPGFEDKKAELEKRLND " misc_feature complement(2444240..2445583) /gene="pgi" /locus_tag="lmo2367" /note="glucose-6-phosphate isomerase; Provisional; Region: pgi; PRK14097" /db_xref="CDD:184504" regulatory complement(2445591..2445596) /regulatory_class="ribosome_binding_site" gene complement(2445685..2446092) /locus_tag="lmo2368" /db_xref="GeneID:985492" CDS complement(2445685..2446092) /locus_tag="lmo2368" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2368" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465891.1" /db_xref="GeneID:985492" /translation="MKRSIHVQAFVYNEKKDEILVVRDRNLTWAFPGGHVETNQTMEE ALASKVKEQTNIDIEIESILHCKERRATWEHVCTFVFRAKPVGNALLASNDDNVFRVK WIPIPLADDLLAVDQLSLNELVRSEGVLYENYT" misc_feature complement(2445778..2446074) /locus_tag="lmo2368" /note="NUDIX hydrolase superfamily; Region: NUDIX_Hydrolase; cd02883" /db_xref="CDD:467528" regulatory complement(2446100..2446105) /regulatory_class="ribosome_binding_site" gene complement(2446240..2446593) /locus_tag="lmo2369" /db_xref="GeneID:984425" CDS complement(2446240..2446593) /locus_tag="lmo2369" /experiment="EXISTENCE:[PMID:19448609]" /note="induced by heat shock, salt stress, oxidative stress, glucose limitation and oxygen limitation" /codon_start=1 /transl_table=11 /product="general stress protein 13" /protein_id="NP_465892.1" /db_xref="GeneID:984425" /translation="MSTFKVGDVVSGKVAGIQSYGAFVALDNSTQGLVHISEITHGFV KDIHDFLEVGQEVKVKILDIDEEKNKISLSIRATEEAPKEQPTKKKQVSSSENDEGFN TLRDKLEEWIKKADK" misc_feature complement(2446249..2446584) /locus_tag="lmo2369" /note="CvfD/Ygs/GSP13 family RNA-binding post-transcriptional regulator; Region: S1_dom_CvfD; NF040579" /db_xref="CDD:468553" regulatory complement(2446604..2446609) /regulatory_class="ribosome_binding_site" regulatory 2446732..2446737 /regulatory_class="ribosome_binding_site" gene 2446747..2447913 /locus_tag="lmo2370" /db_xref="GeneID:984540" CDS 2446747..2447913 /locus_tag="lmo2370" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_465893.1" /db_xref="GeneID:984540" /translation="MSQFDEVIPRIGTNSEKWDGAEELFGRKDIIPMWVADMDFRAPK PVLDAFQRQIDHGIFGYSTKSKALVEAVIDWNKEQHQFEIDPSTLFFNGAVVPTISLA IRSLTNEGDAVLMVSPIYPPFFNVTKATERKVVMSPLIYENRQYRMDFNDLEKRMKEE NVKLFLLCNPQNPGGRCFTKEELVELAKLCEKYQIPIVSDEIHADLVMKNHKHVPMMV AAPFYQDQIITLMAATKTFNLAAIKASYYIITNKDYQTRFAAEQKYATTNGLNVFGIV GTEAAYRHGAPWLKELKEYIYSNYEYVKAELEKEVPEVGVTDLEATYLMWLDCRALPK DEKTIYTDLIEAGVGVQMGSGFGHSGKGFVRFNIACPKETLEKSVKLLIQGLKK" misc_feature 2446747..2447904 /locus_tag="lmo2370" /note="Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism, General function prediction only]; Region: MalY; COG1168" /db_xref="CDD:440782" regulatory 2447922..2447957 /regulatory_class="terminator" regulatory 2448035..2448040 /regulatory_class="ribosome_binding_site" gene 2448052..2449155 /locus_tag="lmo2371" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984414" CDS 2448052..2449155 /locus_tag="lmo2371" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_465894.1" /db_xref="GeneID:984414" /translation="MFLGLRELVYSKLRYILVTGIMVLIMLLSLILSGLANGLAYDNA SSVADNGVPYYVLSKDAQDKLSRSQFPESKLADVKKDANVKDAAVLGQSMQTLKRESD DKKFSVALFGIQPDSFLAPKISDGANIQVTKPDEIVVDSSLKSDGIKIGDVLMDDILN RELTVVGFTENQKYSHAPVVYINIATWQEINPVLYHQKIPQTSTIAIKTENPDKGVTL TDKDLTTIDHKEFLNQIPGYSAEQMTLNMMIFFLIIIGGFILTAFFYVMTLQKTTQFG ILKALGTKTSYLVKSIITQVVIISIISILISVGVTLILPSIMPAAMPFRLSPMTIALY SGLFFLVALFGALLSLRRIAKVDALDAIRGGDE" misc_feature 2448445..2449146 /locus_tag="lmo2371" /note="ABC-type transport system involved in lipoprotein release, permease component LolC [Cell wall/membrane/envelope biogenesis]; Region: LolE; COG4591" /db_xref="CDD:443648" regulatory 2449140..2449145 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2371" gene 2449155..2449835 /locus_tag="lmo2372" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984413" CDS 2449155..2449835 /locus_tag="lmo2372" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465895.1" /db_xref="GeneID:984413" /translation="METLLSFEKVYKDYPSGPSIIHALKETNFEAKKGELIAIVGPSG SGKSTLLSLAGALLTPTGGTISINGKSVGNLSSKEQTALRLEEIGFIFQAAHLVPYLH VKDQISFIGKMAGKSAAELEKDTASLLSQLGISDRANFYPKDLSGGQKQRVAIARALI NQPSVILADEPTASLDTERSREVVELIRNEVVQTSRTAIMVTHDERMLDLVNHVYRME DGILTQES" misc_feature 2449155..2449832 /locus_tag="lmo2372" /note="ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]; Region: LolD; COG1136" /db_xref="CDD:440751" regulatory complement(2449829..2449865) /regulatory_class="terminator" regulatory 2449840..2449876 /regulatory_class="terminator" gene complement(2449878..2450192) /locus_tag="lmo2373" /db_xref="GeneID:984403" CDS complement(2449878..2450192) /locus_tag="lmo2373" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS beta-glucoside transporter subunit IIB" /protein_id="NP_465896.1" /db_xref="GeneID:984403" /translation="MKNIVLVCAAGMSTSLLVTKMRKAAEERGETCEIEAYSIAEVSN LIDDADVVLLGPQVRYQKKTVDELAAGKIPVDVIDMAAYGTMNGEKVLGQALDLINGF QK" misc_feature complement(2449893..2450189) /locus_tag="lmo2373" /note="Phosphotransferase system cellobiose-specific component IIB [Carbohydrate transport and metabolism]; Region: CelA; COG1440" /db_xref="CDD:441049" regulatory complement(2450200..2450205) /regulatory_class="ribosome_binding_site" regulatory 2450424..2450429 /regulatory_class="ribosome_binding_site" gene 2450437..2451798 /locus_tag="lmo2374" /db_xref="GeneID:984416" CDS 2450437..2451798 /locus_tag="lmo2374" /EC_number="2.7.2.4" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive" /codon_start=1 /transl_table=11 /product="aspartate kinase" /protein_id="NP_465897.1" /db_xref="GeneID:984416" /translation="MKVIKFGGSSLASGIQLNKVFQLVAEDPDRKIIVVSAPGKRFKE DTKVTDLLIDCAAKALLGEDTSELFESVIARYAGIALDTGMSDEIINQIRADLQATIS SDKSDPDKFLDRMKASGEDNNAKLIAAYFKFKGLNANYINPKDAGLLVTDEHASAQVL PESYDRLFALREREGIIVFPGFFGYTKDGEISTFSRSGSDITGAIVANGAQAELYENF TDVDAVYAVNPTIVKNPKKVLELTYREMRELSYAGFSVFHDEALIPAFHAGIPVHIKN TNNPDSCGTRVVHERENNNGPVVGIASDDGFCSIYISKYLMNREIGFGRKVLQILEDA GLNYEHMPSGIDDLTIIIRENQFGEDTERTIMSRLKEELNADQVIMQHGISLIMVVGE TMRHNVGITSRASKALSDAKVNIEMINQGSSEVSIMFGVKEEQENTAVRALYNEFFSE VFV" misc_feature 2450437..2451795 /locus_tag="lmo2374" /note="aspartate kinase; Reviewed; Region: PRK09034" /db_xref="CDD:236364" regulatory complement(2451795..2451837) /regulatory_class="terminator" regulatory 2451799..2451845 /regulatory_class="terminator" gene complement(2451840..2452235) /locus_tag="lmo2375" /db_xref="GeneID:987941" CDS complement(2451840..2452235) /locus_tag="lmo2375" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2375" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465898.1" /db_xref="GeneID:987941" /translation="METSHPIKINNQLIYGRDKTWLESLHQNTNQLILTIEIDFEDES KLQKMVFNGLIFYSSTELDTYEKSKWSTSWLTSQSNFEIIEQSDLINERVKIRSDYNI QDFKHYRISTYDYIIDVIAKTYQLKEAHK" regulatory complement(2452245..2452250) /regulatory_class="ribosome_binding_site" regulatory complement(2452275..2452311) /regulatory_class="terminator" gene complement(2452322..2452906) /locus_tag="lmo2376" /db_xref="GeneID:985762" CDS complement(2452322..2452906) /locus_tag="lmo2376" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase" /protein_id="NP_465899.1" /db_xref="GeneID:985762" /translation="MTYPQLSKEVAPNEIEAEMITNRGTIRIKLFPEIAPKTVENFVT HSKNGYYDGLIFHRVIPEFMIQGGDPDGRGTGGESIWGESFEDEFSTEAFNLRGALSM ANAGPNTNGSQFFIVQKPDMPADMLGQMEQAGFPVEVIEAYKQGGTPWLDGRHTVFGH VIEGMDVVDEIANLPTGMQDKPVNDVVIEKINIK" misc_feature complement(2452325..2452876) /locus_tag="lmo2376" /note="Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]; Region: PpiB; COG0652" /db_xref="CDD:440417" regulatory complement(2452916..2452921) /regulatory_class="ribosome_binding_site" regulatory 2453123..2453129 /regulatory_class="ribosome_binding_site" gene 2453138..2454349 /locus_tag="lmo2377" /db_xref="GeneID:987926" CDS 2453138..2454349 /locus_tag="lmo2377" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="multidrug transporter" /protein_id="NP_465900.1" /db_xref="GeneID:987926" /translation="MTTRTRNLYILMLANLLMSASMTMIMPFLSLYIETFGDYSNAYV QRWAGYIFGVTFLIAFIFSPIWGRIGDKHGYKGILILTSVGLSICIFLMGFAHSVTYL LILRIFMGVVTGFIGVSNAFIARQTPRNEAGKVLGTLQLGGVTGMLFGPLIGGAMADL FGFKDTFTITGIAMMVAALIVAFGVKEIRTEEQKEAAKVVYSRRAVLKQIFTLRVLFT VMVITALIQIANFSVQPLLALYVGDMTQSDNIAFLSGLAFSATGFGNLVMTRKWGQLG DKYGYEKILNILLIMAAVFVIPQAFATNLWVFIFFRFLFGIAIGGMVPCTTAYIRLAA PGVMQGEMLGYNQSARFLGNVIGPILGGTLAGFTGIPSVFLFMSFMFLVAFFILLYAL RSDRKRHVNVD" misc_feature 2453174..2454313 /locus_tag="lmo2377" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" misc_feature order(2453189..2453194,2453201..2453206,2453213..2453215, 2453324..2453326,2453474..2453479,2453483..2453491, 2453498..2453500,2453555..2453557,2453564..2453569, 2453576..2453578,2453804..2453806,2453813..2453818, 2453825..2453833,2453840..2453842,2453930..2453932, 2453942..2453944,2454089..2454094,2454104..2454106, 2454116..2454118,2454164..2454166,2454173..2454178, 2454185..2454190,2454197..2454199) /locus_tag="lmo2377" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:349949" regulatory 2454356..2454392 /regulatory_class="terminator" regulatory 2454681..2454686 /regulatory_class="ribosome_binding_site" gene 2454695..2457103 /locus_tag="lmo2378" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984923" CDS 2454695..2457103 /locus_tag="lmo2378" /experiment="EXISTENCE:[PMID:19448609]" /note="subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali" /codon_start=1 /transl_table=11 /product="monovalent cation/H+ antiporter subunit A" /protein_id="NP_465901.1" /db_xref="GeneID:984923" /translation="MSFLHLAIVLPFIVALLIPLFYRWTKQVHTGWLVLPIPVILFIY FLTFIPKTMEGATIVSMPWIPRLEINFTVVVDGLSLLFALLITGIGSLVTFYSIYYLG KKKERLSNFYTFLFIFMTAMLGVVLSDNLIVLYLFWELTSISSFLLIGYWYHRERSRY GARKSMMITVFGGLMMLGGFILLHIMSDSFSIREIISNADVISNNSLFIPAMILVLLG AFTKSAQVPFHIWLPDAMEAPTPVSAYLHSATMVKAGIYIVARFTPLFASSGVWFWTV SLVGITTLFWGSLNATKKNDLKAILAYSTISQLGLIMALLGVGAASLHFDTLSDDIYV MAIVAAVFHLFNHATFKGSLFMMVGIVDHETGTRDIRRLGGLMRIMPITATIAFIGTF AMAGIPPFNGFLSKEMFFESMVNITQLQLFDASTWGVLLPVVAWVASVFTFVYSMIIF FKTFTGKVKPYLLPKKPHEAPFGLLLPPIILSIFVVGIGLFPNLIAEPILEPAVRAIV PGLATDFSIHISLWHGFTPALLMTFGVVAVGIVLFLTHKYWKPWITTRVPKALRIGKT YDNGMYYLEQGSYRMTMFIMTGWLRTYLNYMLSAFILMMASVMIFTQALDFNFSSMTK VTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLII ETISVVLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDSI SKYYVDNAYVEAAGRNIVNVILVDFRGFDTMFETAVLSIAAIGIYAMIKLRLTKRGEN DENE" misc_feature 2454695..2457088 /locus_tag="lmo2378" /note="monovalent cation/H+ antiporter subunit A; Reviewed; Region: PRK12645" /db_xref="CDD:237155" regulatory 2457076..2457081 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2378" gene 2457087..2457512 /locus_tag="lmo2379" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984386" CDS 2457087..2457512 /locus_tag="lmo2379" /experiment="EXISTENCE:[PMID:19448609]" /note="subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport" /codon_start=1 /transl_table=11 /product="monovalent cation/H+ antiporter subunit B" /protein_id="NP_465902.1" /db_xref="GeneID:984386" /translation="MMKTNDVLLRNVTKVVAFIIFLFSLHLFFAGHYNPGGGFVAGLT TAGAITLTLLAYDTKTVASMLNINTIMLTGVGLVFALGTGMIGIFTGDPFLTHKFGHV DLPILGDTALHTATLFDLGVYLVVVGVTLTIIQTIGESD" misc_feature 2457090..2457509 /locus_tag="lmo2379" /note="Na(+)/H(+) antiporter subunit B; Region: PRK12573" /db_xref="CDD:183602" regulatory 2457499..2457504 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2379" gene 2457512..2457859 /locus_tag="lmo2380" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987938" CDS 2457512..2457859 /locus_tag="lmo2380" /experiment="EXISTENCE:[PMID:19448609]" /note="subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali" /codon_start=1 /transl_table=11 /product="monovalent cation/H+ antiporter subunit C" /protein_id="NP_465903.1" /db_xref="GeneID:987938" /translation="MELLMSILIGLIFAAAVYLILSKSLLRIIIGTAVLSHGVNLLVL TMGGLKKGRVPILGTPGAGTYNDPLPQALILTAIVISFGVTAFFLVLAYRAYQELDSE SVSKTRGHEADDE" misc_feature 2457512..2457853 /locus_tag="lmo2380" /note="putative monovalent cation/H+ antiporter subunit C; Reviewed; Region: PRK08600" /db_xref="CDD:181497" regulatory 2457835..2457840 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2380" gene 2457852..2459336 /locus_tag="lmo2381" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985605" CDS 2457852..2459336 /locus_tag="lmo2381" /EC_number="1.6.5.3" /experiment="EXISTENCE:[PMID:19448609]" /note="subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone" /codon_start=1 /transl_table=11 /product="monovalent cation/H+ antiporter subunit D" /protein_id="NP_465904.1" /db_xref="GeneID:985605" /translation="MNNIILMPILIPFLGAITLMLLPKRVIVQRVFALIFSGILVVAT IGLVFYIRENGITTVNIGNWAAPFGITMVGDMLAVLLTATTSIVLFCVILYSFYTIGK PREKFLYYPAILFMIVGVNGSFLTGDIFNMFVFFEVMLMASYVLLVIGGTQVQLKATI KYLLINVVGSGFFVVAIALLYSMIGTLNMADISQKITDLNGANTGMISIVAVLFLFVF GLKAGLFPLYFWLPGSYFAPPIPVLALFGGLLTKVGVYAIIRTYTLFFSSLTDFVVPL LGILAIVTIILGVIGAISYYDMKTIVIYNIMIAIGVILFSVSIMTRESMTGAVFYLIH DMIIKAALFLIVGIVMAITGYSSVKKFSGLMSVKPSLGWIFFIATLGLAGIPPLSGFI GKLLIVEGAFSAGQMVGGIIILLSSLFVLMSLIKVFTKGFWGEKKGVFNLQIPYKKML VPVVILLAISIGYGVFSNAIYPFIEQAVDPLVDPSVYIHAVIKE" misc_feature 2457852..2459333 /locus_tag="lmo2381" /note="putative monovalent cation/H+ antiporter subunit D; Reviewed; Region: PRK07691" /db_xref="CDD:181085" regulatory 2459329..2459334 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2381" gene 2459343..2459822 /locus_tag="lmo2382" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984482" CDS 2459343..2459822 /locus_tag="lmo2382" /experiment="EXISTENCE:[PMID:19448609]" /note="subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali" /codon_start=1 /transl_table=11 /product="monovalent cation/H+ antiporter subunit E" /protein_id="NP_465905.1" /db_xref="GeneID:984482" /translation="MAFQLILNIILACLWMFLESSFSFATFIIGFIIGIFLLFFMRRF LGSRFYLFRLFALVKLVFRFLHDLIVSTVHVSRIVLKKDMNIRPGIFRYDTTLETDWE VTMLALLITLTPGTLSIDISDDYKAIYVHSLHVPNIEEEIATIRKSYEGAIMEVFHG" misc_feature 2459343..2459816 /locus_tag="lmo2382" /note="Na+/H+ antiporter subunit E; Region: PRK12651" /db_xref="CDD:237159" regulatory 2459803..2459808 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2382" gene 2459819..2460106 /locus_tag="lmo2383" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987601" CDS 2459819..2460106 /locus_tag="lmo2383" /experiment="EXISTENCE:[PMID:19448609]" /note="subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali" /codon_start=1 /transl_table=11 /product="monovalent cation/H+ antiporter subunit F" /protein_id="NP_465906.1" /db_xref="GeneID:987601" /translation="MIIQIALSIGLLLYSISTFLYLYRILKGPTTSDKVVALDSIGMN LVAIVALLSMFYDTHAFLDVILLIALLAFIGTVSFAKFIEKGKVIDRERDN" misc_feature 2459822..2460103 /locus_tag="lmo2383" /note="Na(+)/H(+) antiporter subunit F1; Region: PRK12600" /db_xref="CDD:183617" regulatory 2460078..2460084 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2383" gene 2460090..2460683 /locus_tag="lmo2384" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987553" CDS 2460090..2460683 /locus_tag="lmo2384" /experiment="EXISTENCE:[PMID:19448609]" /note="subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali" /codon_start=1 /transl_table=11 /product="monovalent cation/H+ antiporter subunit G" /protein_id="NP_465907.1" /db_xref="GeneID:987553" /translation="MNVIIEIIISIMIIIGGLLSILAAIGVIRLPDVYTRTHAAGISN TFGVSLLLFATVGYFFHSGEGFNARVLLAVLFIFLTTPVASHLINRAAYDTGVPLAIR IRDQLRSVKKDDIKKKKSLIIRQEQIEKARQEREELEERMEWERREEKIDEREDQEEQ EREREEQTIEEQSDDSEHEIIEQDESETESDDDKSEK" misc_feature 2460090..2460680 /locus_tag="lmo2384" /note="putative monovalent cation/H+ antiporter subunit G; Reviewed; Region: PRK12585" /db_xref="CDD:183610" regulatory complement(2460678..2460716) /regulatory_class="terminator" gene complement(2460720..2461091) /locus_tag="lmo2385" /db_xref="GeneID:987552" CDS complement(2460720..2461091) /locus_tag="lmo2385" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465908.1" /db_xref="GeneID:987552" /translation="MGLQETIGIEIVSVEKGKAVVQLEVTEKVHQPFGYLHGGVSVVL AEHAASIGAAKSIEPDEIVFGLEINANHLASKQAGLVTATAEAIHIGKSTQVWEIKIT DETEKLLCISRCTIAVKKKRK" misc_feature complement(2460723..2461091) /locus_tag="lmo2385" /note="Acyl-CoA thioesterase PaaI, contains HGG motif [Secondary metabolites biosynthesis, transport and catabolism]; Region: PaaI; COG2050" /db_xref="CDD:441653" regulatory complement(2461098..2461103) /regulatory_class="ribosome_binding_site" regulatory 2461207..2461212 /regulatory_class="ribosome_binding_site" gene 2461219..2461692 /locus_tag="lmo2386" /db_xref="GeneID:987551" CDS 2461219..2461692 /locus_tag="lmo2386" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465909.1" /db_xref="GeneID:987551" /translation="MSIFTNTPLIASIIAIVFAQVVKVPIHILVYRKFNLGLMFSTGG MPSSHSAAVTALMTTLAIEYGLDSPYFAISVVFGIIVMFDATGVRRQAGEQAVVLNKL VTDFQDFVEHAKGLAAPEQEEKTKHLKELLGHKPMEVFFGALTGIAIGFILEMFM" misc_feature 2461219..2461689 /locus_tag="lmo2386" /note="Acid phosphatase family membrane protein YuiD [General function prediction only]; Region: YuiD; COG1963" /db_xref="CDD:441566" regulatory 2461700..2461730 /regulatory_class="terminator" regulatory 2461788..2461793 /regulatory_class="ribosome_binding_site" gene 2461803..2463029 /locus_tag="lmo2387" /db_xref="GeneID:987550" CDS 2461803..2463029 /locus_tag="lmo2387" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465910.1" /db_xref="GeneID:987550" /translation="MKKVTLIFSVYTFILGILVGVIAALFLAMVHFATTFLWDYLPNQ FDFSWYYPLLIGLIGSFFVGMVQLKLGDYPRSMHDNVAEAKKTGRMEYRKVLLPTILS AWIILTFGASVGPEAALIGIVGGATTWIIDHLKLSMAHKEELVSLSVGAIISSIFHAP FSGLAEEIDESSQAKKIPKNSKLVLSLLISFSALGSFLWLKSFLKMPASIFAIRLPDM GWSWWFILLFIPTIILGWLFSVYFQQLQVYIAKAASVIKNKMVAAIIGGLSIGLFGII SSFMLFSGEHQLIELTTTVQNYSIPFLLIIALLKPVLVAICLATGWNGGAIFPAIFTS TVMGYIATYWIDGSTGFLITVFVTACCTKIVGKPVLTASILLFIFPLQFFPFILLTAF IVNKNWWVSIRKIIRA" misc_feature 2461848..2462987 /locus_tag="lmo2387" /note="CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This...; Region: Voltage_gated_ClC; cd00400" /db_xref="CDD:238233" misc_feature order(2462037..2462051,2462142..2462156,2462775..2462789) /locus_tag="lmo2387" /note="Cl- selectivity filter [active]" /db_xref="CDD:238233" misc_feature order(2462040..2462042,2462046..2462048,2462148..2462153, 2462775..2462783) /locus_tag="lmo2387" /note="Cl- binding residues [ion binding]; other site" /db_xref="CDD:238233" misc_feature 2462148..2462150 /locus_tag="lmo2387" /note="pore gating glutamate residue [active]" /db_xref="CDD:238233" misc_feature order(2462283..2462285,2462310..2462312,2462355..2462357, 2462376..2462378,2462898..2462900,2462907..2462909, 2462931..2462933,2462952..2462954,2462973..2462978) /locus_tag="lmo2387" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238233" regulatory complement(2463024..2463059) /regulatory_class="terminator" regulatory 2463035..2463070 /regulatory_class="terminator" gene complement(2463066..2463884) /locus_tag="lmo2388" /db_xref="GeneID:987547" CDS complement(2463066..2463884) /locus_tag="lmo2388" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465911.1" /db_xref="GeneID:987547" /translation="MEQLFDILPSEWAERFLETEKERMELHFKDAGKLSLLQSKAGGR GYLPKEQGYPVTEEGKPLSLLTQINFSEMPQMENYPEFGLLAFYVDYQDDLYGLNFEN PTSQEGFRVFFFDDLGSESLTAEEQDAFFEDVAKTDFYPVVNGEFKIAGQVSDQILLQ DSFDFENEFGSNFYELADQIFAEDEDKSEALYQIGKECSQIGGYPFFTQEDPRMYTEN PHHDTLLFQLASEDFDENRMAIMWGDCGVGNFFINKQDLINRDFSNIMYNWDCS" misc_feature complement(2463069..2463857) /locus_tag="lmo2388" /note="Uncharacterized conserved protein YwqG, DUF1963 family [Function unknown]; Region: YwqG; COG3878" /db_xref="CDD:443086" regulatory complement(2463891..2463896) /regulatory_class="ribosome_binding_site" regulatory complement(2463916..2463957) /regulatory_class="terminator" gene complement(2463969..2465180) /locus_tag="lmo2389" /db_xref="GeneID:987546" CDS complement(2463969..2465180) /locus_tag="lmo2389" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase" /protein_id="NP_465912.1" /db_xref="GeneID:987546" /translation="MSKPKIVILGAGYGGLKTLRKLQQRNLEAEIVLVNKNDYHHETT WLHEAAAGTIEPEKLMYPLDKVVNDTKTTFIQDTVVKINKDEKTVTLDANGDISYDYL LIALGSEAETFGISGLKEYAFTITSVESVKKIRAHIEAQFAKWKTDPRDELLTIIVGG AGFTGIEFLGELTNRIPELVKQYDVPREKVRIYCMEAAPKVLPQFDAKLVDYGVGVLE DRGVEFHVGKPVKEATADGVKYAESENEVREIKAATIIWAAGVRGNSVIEASGFEAGR GRVKVNNNLTVPGNEEILIVGDCSLIINPANDRPFPPTAQIAMQQADVAAVNLAKLVK GETDLQDFVYHEKGTVCSLGDNDAIGVVFGKNLKGYPASVMKKVIDDRALLLIGGSGV LASKGKFKFYK" misc_feature complement(2464014..2465174) /locus_tag="lmo2389" /note="NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; Region: Ndh; COG1252" /db_xref="CDD:440864" regulatory complement(2465190..2465196) /regulatory_class="ribosome_binding_site" regulatory 2465615..2465620 /regulatory_class="ribosome_binding_site" gene 2465630..2466625 /locus_tag="lmo2390" /db_xref="GeneID:987545" CDS 2465630..2466625 /locus_tag="lmo2390" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical thioredoxine reductase" /protein_id="NP_465913.1" /db_xref="GeneID:987545" /translation="MDEKTKIYDITIIGGGPVGLFAAFYAGMRNASVKIIESLPQLGG QLSTLYPEKYIYDIPGYPSVRAQELVNNLIQQMKPFDPTVALEEAVQSVEKQVDGTFE IITKKDTHYSKAIIITAGNGAFEPRRLDLPEAEQYEGTNIHYFINDLSRFSGRRVAVC GGGDSAVDWALMLEKVASSVAIVHRRNAFRAHEHSVNNLEKSSIAIKTPFIPTEVLGN GDKLTHITLQEVKGDTTETLEIDDFIINYGFVSSLGPIKNWGLELERNSIVVNSKMET SIPGIYCAGDICTYDGKVKLIATGFGEAPTAVNNAMNFIDPKTRVQPMHSTSLFE" misc_feature 2465651..2466583 /locus_tag="lmo2390" /note="Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; Region: TrxB; COG0492" /db_xref="CDD:440258" regulatory 2466635..2466663 /regulatory_class="terminator" regulatory 2466698..2466703 /regulatory_class="ribosome_binding_site" gene 2466713..2467342 /locus_tag="lmo2391" /db_xref="GeneID:987544" CDS 2466713..2467342 /locus_tag="lmo2391" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465914.1" /db_xref="GeneID:987544" /translation="MNVLVIGANGKIGRLLVEKLAMEKGFFVRAMVRKAEQVSELEKL GAKPIIADLKKDFHYAYDEIEAVIFTAGSGGHTPASETVNIDQNGAIKAIETAKEKGV RRFIIVSSYGADNPENGPESLAHYLKAKQAADEELKKSGLDYTIVRPVGLSDDPATGK IAEVSGKPKTNIPRADVADFISEALSEKSSFYKTYTIESGDTPIKQFFN" misc_feature 2466716..2467315 /locus_tag="lmo2391" /note="atypical (a) SDRs, subgroup 5; Region: SDR_a5; cd05243" /db_xref="CDD:187554" misc_feature order(2466731..2466733,2466737..2466748,2466809..2466811, 2466866..2466871,2466923..2466928,2466965..2466967, 2467037..2467042,2467100..2467102,2467157..2467168) /locus_tag="lmo2391" /note="NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:187554" misc_feature order(2466968..2466970,2467040..2467042,2467088..2467090, 2467100..2467102) /locus_tag="lmo2391" /note="putative active site [active]" /db_xref="CDD:187554" regulatory complement(2467338..2467376) /regulatory_class="terminator" regulatory 2467349..2467387 /regulatory_class="terminator" gene complement(2467388..2467621) /locus_tag="lmo2392" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987541" CDS complement(2467388..2467621) /locus_tag="lmo2392" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465915.1" /db_xref="GeneID:987541" /translation="MNPIVEFCVNNLASGADAAFAKLDADDNLDVIEYDCLTYCDLCA TSLFALVDGEVVRGETAEELVANIYTFLEENPF" misc_feature complement(2467391..2467621) /locus_tag="lmo2392" /note="hypothetical protein; Provisional; Region: PRK13669" /db_xref="CDD:184226" regulatory complement(2467631..2467636) /regulatory_class="ribosome_binding_site" gene complement(2467643..2467969) /locus_tag="lmo2393" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987540" CDS complement(2467643..2467969) /locus_tag="lmo2393" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465916.1" /db_xref="GeneID:987540" /translation="MVNEAKLYVYGSTTICASCVGAPSSKETEEWLRAAIGRKFSGQP FVVEYVDIFNPPNETALADMANKIVEEDYMYPVIVVDGEIIAEGNPRLKDIYQVMTDR GYLATM" misc_feature complement(2467673..2467948) /locus_tag="lmo2393" /note="Protein of unknown function (DUF1462); Region: DUF1462; pfam07315" /db_xref="CDD:429405" regulatory complement(2467979..2467984) /regulatory_class="ribosome_binding_site" gene complement(2468210..2468392) /locus_tag="lmo2394" /db_xref="GeneID:987505" CDS complement(2468210..2468392) /locus_tag="lmo2394" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465917.1" /db_xref="GeneID:987505" /translation="MCGGRTLQEGLHARFARMHIWAVTRYTSNGPNKNTFLRLRKERA LSTGKVERQLGCAPNC" regulatory complement(2468401..2468406) /regulatory_class="ribosome_binding_site" gene complement(2468545..2468703) /locus_tag="lmo2395" /db_xref="GeneID:987504" CDS complement(2468545..2468703) /locus_tag="lmo2395" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2395" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465918.1" /db_xref="GeneID:987504" /translation="MENDSLCGGHILQEGLHVRFARMHIWAVTRYTSNGRMGMRIFDR WWMDFGGG" regulatory complement(2468711..2468716) /regulatory_class="ribosome_binding_site" regulatory 2469076..2469081 /regulatory_class="ribosome_binding_site" gene 2469093..2471915 /locus_tag="lmo2396" /db_xref="GeneID:987503" CDS 2469093..2471915 /locus_tag="lmo2396" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_465919.1" /db_xref="GeneID:987503" /translation="MYKLVKIILALFLITTVFLPFSNVKAAPTDVVNIPDPVLNSGLK NIIGNPFLDEITEANMATITVADLSNMSGAPGYPVTGLIKDLTGLDKAVNMTKLYFSN QSQIKNLDKIKNLPNLKKIVAVTTGLNNISALGEMPALEEVELGGDYITDFTPLLEKE NLTSFSYNSYAWSNPAYHQINNDEFKNFTKLKSLVKLDLTWNNITDLSPLTENDHITN LNLNYNQFTNVAPIATMKNLKVLYLNNNNLTSIDALNTLRGLTIAYADNNNITDLSNL KNFFEAMVAQGDYEGLQINNQTITLPTINIKKGATANSTNPTLDINGQKMPVSNISND GTVSADNKTVSFANLPIGNKTVTYKAKFTATSSKGVPLSYSINVSQPINVSEQTDSTV SVFYQDENGNELAPTETLSGKSGEDYQTTEKTIANYQLKEIEGQASGQFTDTDSTVTY VYEKADGAPVTVKYVDADGNDLATSDTLNGKIDAPYQTSAKSLSGWTVKTTPNNATGV FTNSKQTVTYVYEKADGAPVTVKYVDGDGNELATSDTLNGKIDAPYQTTAKSLSGWTV KTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQT TAKSLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDADGNELATSDTL NGKIDAPYQTTAESLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDGD GNELATSDTLNGKIDAPYQTTAKSLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGA PVTVKYVDADGNELATPDTLNGKLDTSYAVTAKNLSGWKLTATPSNANGVFTTDAQTV TFVYAKQEDDPKKDDKTPNNTKPDTNKTPIKINENKPTASKVTTIKRQTKLPKTGDTQ QDSILFGLVGTCFVLLGIYSISKKNS" misc_feature 2469207..2470064 /locus_tag="lmo2396" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 2469375..2469443 /locus_tag="lmo2396" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2469444..2469509 /locus_tag="lmo2396" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2469510..2469575 /locus_tag="lmo2396" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2469672..2469737 /locus_tag="lmo2396" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 2469738..2469803 /locus_tag="lmo2396" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 2469804..2469869 /locus_tag="lmo2396" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 2469870..2469911 /locus_tag="lmo2396" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 2470272..2470451 /locus_tag="lmo2396" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 2470473..2470655 /locus_tag="lmo2396" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 2470677..2470859 /locus_tag="lmo2396" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 2470881..2471063 /locus_tag="lmo2396" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 2471085..2471267 /locus_tag="lmo2396" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 2471289..2471471 /locus_tag="lmo2396" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature 2471493..2471672 /locus_tag="lmo2396" /note="MucBP domain; Region: MucBP; pfam06458" /db_xref="CDD:461917" misc_feature <2471673..2471906 /locus_tag="lmo2396" /note="pullulanase, extracellular, Gram-positive; Region: pullulan_Gpos; TIGR02102" /db_xref="CDD:273973" regulatory 2472073..2472078 /regulatory_class="ribosome_binding_site" gene 2472089..2472325 /locus_tag="lmo2397" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987502" CDS 2472089..2472325 /locus_tag="lmo2397" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="NifU protein" /protein_id="NP_465920.1" /db_xref="GeneID:987502" /translation="MEEISYAEVDKALKKFRPFLVRDGGDYELIEVTQDGIVKIKLLG ACETCPSSDMTLKMGIELTLAEKIIGFKEVVQVF" misc_feature 2472113..2472313 /locus_tag="lmo2397" /note="NifU-like domain; Region: NifU; pfam01106" /db_xref="CDD:460066" regulatory 2472337..2472371 /regulatory_class="terminator" regulatory 2472424..2472429 /regulatory_class="ribosome_binding_site" gene 2472438..2472938 /gene="ltrC" /locus_tag="lmo2398" /db_xref="GeneID:987501" CDS 2472438..2472938 /gene="ltrC" /locus_tag="lmo2398" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465921.1" /db_xref="GeneID:987501" /translation="MVEKQSALESKARSWLIERGVEIDDIAELVLFLQQKYHPGLELE ICRQNVEHVLRKREVQNAVLTGIQLDVMAEKGELVQPLQNIISADEGLYGVDEILALS IVNVYGSIGFTNYGYIDKVKPGILAKLNEHDGIAVHTFLDDIVGAIAAAAASRLAHSY HDDIVN" misc_feature 2472471..2472875 /gene="ltrC" /locus_tag="lmo2398" /note="Phosphatidylglycerophosphatase A; a bacterial membrane-associated enzyme involved in lipid metabolism; Region: PgpA; cd06971" /db_xref="CDD:133477" misc_feature order(2472480..2472482,2472558..2472560,2472618..2472620, 2472627..2472632,2472639..2472644,2472705..2472707, 2472714..2472722,2472729..2472734,2472738..2472743, 2472750..2472752,2472759..2472767,2472771..2472779, 2472783..2472788,2472792..2472797) /gene="ltrC" /locus_tag="lmo2398" /note="tetramer interfaces [polypeptide binding]; other site" /db_xref="CDD:133477" misc_feature order(2472714..2472716,2472723..2472728,2472852..2472854, 2472861..2472866) /gene="ltrC" /locus_tag="lmo2398" /note="binuclear metal-binding site [ion binding]; other site" /db_xref="CDD:133477" regulatory 2472946..2472994 /regulatory_class="terminator" gene complement(2472963..2474273) /locus_tag="lmo2399" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987500" CDS complement(2472963..2474273) /locus_tag="lmo2399" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465922.1" /db_xref="GeneID:987500" /translation="MDVFNDFFVIFLIAATAFFVASEFAIVAIRKPTVLQLVASEDPR AKYVKKVTSNMNDYLAACQLGNTLAALAMGWVGEATMRGWLEPLFLMLPVPESVEKPI SIFVSFILITFLNVVLGELAPKTFTIQSTEKVALFIARPLVYWYRLTFPLNWLLNNSA NLITRMFGVKQTVDADQMTPTELKIIFEDSYRQGLLNPQEFRYMKNIFKLGDVPAKEV MIPRMSMIAIDQTATVRDLLKLTSEHTYHIFPVTEDEDKDHIIGMLRVSAVMAGLGKD ETIVTQSIQPFITPVLEVFEGMILEELLVKMQQESEPFVVLTDEYGGTSGIVTLEDVM EVIVGDMEEAKGPKGIRKVALNHYIIEGSEPLLEVEEALGVPIEGPGVHTLSGWMLLE RFDLEAGDEIEHEGYRFIVRSMNKNSIRQVEVKLGKEKPVKLEE" misc_feature complement(2472981..2474255) /locus_tag="lmo2399" /note="Hemolysin-related protein, contains CBS domains, UPF0053 family [General function prediction only]; Region: TlyC; COG1253" /db_xref="CDD:440865" regulatory complement(2474281..2474286) /regulatory_class="ribosome_binding_site" gene complement(2474309..2474752) /locus_tag="lmo2400" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987499" CDS complement(2474309..2474752) /locus_tag="lmo2400" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_465923.1" /db_xref="GeneID:987499" /translation="MVSIRKVTKDNFHETAKLEVHPHQKTFVAENWYSIIEASFEETY HSLVIYADNMPVGYAMYGMDTDDGEFWLVRFMTGKEHQGKGYGGDALEQIIEMVKNLP EQPARLRLSYEPDNIVAEKFYAKYGFEKTGEIIDGEAVADLWFKR" misc_feature complement(2474312..2474584) /locus_tag="lmo2400" /note="Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]; Region: RimI; COG0456" /db_xref="CDD:440224" regulatory complement(2474760..2474765) /regulatory_class="ribosome_binding_site" regulatory complement(2474769..2474798) /regulatory_class="terminator" gene complement(2474801..2475568) /locus_tag="lmo2401" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987498" CDS complement(2474801..2475568) /locus_tag="lmo2401" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465924.1" /db_xref="GeneID:987498" /translation="MKNYKAYLIDLDGTMYRGAEVIPEAIIFIENLKRAGLPYLFVTN NSTKTPGQVAEHLTDMGIQAVSDDVFTTSQATVQFMMEQKREKTVYVIGERGIKQELT DNGFEITSSNPAFVVVGLDREVDYEKFSKAALAVRGGAMFISTNGDAAIPTERGLLPG NGSITSVVSVATETAPIFIGKPESIIMEQALAKLGVHKDEAIMVGDNYETDIMAGINY GMDTLIVHTGFTSKEALLTKEIQPTYAVTKLTDWEFN" misc_feature complement(2474816..2475556) /locus_tag="lmo2401" /note="UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase; Region: HAD_Pase_UmpH-like; cd07530" /db_xref="CDD:319832" misc_feature complement(order(2474936..2474941,2474948..2474956, 2475026..2475028,2475125..2475127,2475434..2475445, 2475527..2475541)) /locus_tag="lmo2401" /note="active site" /db_xref="CDD:319832" regulatory complement(2475576..2475581) /regulatory_class="ribosome_binding_site" gene complement(2475588..2475863) /locus_tag="lmo2402" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987497" CDS complement(2475588..2475863) /locus_tag="lmo2402" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465925.1" /db_xref="GeneID:987497" /translation="MTITIQDLNYEIITNYRDAFDEEKLNERFSDILGRYDYIVGDWG YDQLRLKGFFEDDNRKAAYDNKISTLKEYIYEYCNFGCAYFVIKKVK" misc_feature complement(2475591..2475860) /locus_tag="lmo2402" /note="Uncharacterized conserved protein YutD, DUF1027 family [Function unknown]; Region: YutD; COG4470" /db_xref="CDD:443567" gene complement(2475860..2477251) /locus_tag="lmo2403" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987496" CDS complement(2475860..2477251) /locus_tag="lmo2403" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465926.1" /db_xref="GeneID:987496" /translation="MMKHLTLWHTNDVHSHLEHWPRIFNFLKEKRTAADKENQSALFF DIGDFLDRVHPLTEGTNGLANTDLLNQLPYDVVTFGNNEGTTLAHEDLDKLYEHAVFP VVCCNFYTNKECTEQPDWVKSIVYKEIEQVKIAIIGATAPFRDYYEEMGWGIEEPISS IKKQVAGLDEDTDVVILLSHLGLPSDERIALEIPEVDVILGGHTHHLLETGKIEGNAL LAAAGRWGEYIGKVDIELDENNQILTKTAMTFKTEDLPAAPNEANEIQGFFDKGRAEL SEKVVAIPGKLAHNWFDDSEIAHILNEAVCEWTGAETFVMNAGIFMTDFEAGIVTDFD IHQMLPHPLNAIALTMSGEELEILIDGIYRKKAELQDIPLRGFGFRGEYFGTVLMERA GFDAENQVALFDNKPIDKTREYRIATHDTFVFAPFFPIVKQIKRKEVYTPELLRDILK WKLKKMYGQEEDK" misc_feature complement(2475887..2477245) /locus_tag="lmo2403" /note="2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family [Nucleotide transport and metabolism, Defense mechanisms]; Region: UshA; COG0737" /db_xref="CDD:440500" regulatory complement(2475871..2475876) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2403" regulatory complement(2477260..2477265) /regulatory_class="ribosome_binding_site" regulatory 2477371..2477376 /regulatory_class="ribosome_binding_site" gene 2477385..2478224 /locus_tag="lmo2404" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987494" CDS 2477385..2478224 /locus_tag="lmo2404" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465927.1" /db_xref="GeneID:987494" /translation="MDITQTVEILLISVFAGVVGSLLGLGGGIIVTPALTLIFGIDIQ YAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLEIATTIGAITGAFVSGLLSATAL YIIFGLLLLYSAFNMIKKVGTEFPTNVKPDPLATKLNLHDSYYDKSLRQTVDYQVANV PAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSNLMMGVTAAASATV YLFQGDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMILEGL GWI" misc_feature 2477478..2478215 /locus_tag="lmo2404" /note="Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family [Inorganic ion transport and metabolism]; Region: TauE; COG0730" /db_xref="CDD:440494" regulatory 2478212..2478217 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2404" gene 2478225..2478590 /locus_tag="lmo2405" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987492" CDS 2478225..2478590 /locus_tag="lmo2405" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2405" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465928.1" /db_xref="GeneID:987492" /translation="MAEKKEEMYRVELIVSALLRIGVVLSAIIIVFGLVMLFITGESG YPGETYPTSLTAIFSGLGTLKPYAIMMFGLFCLILTPVLRVVVSLFTFLKEKDYLYVG ITGIVLIILVISFLIGIKA" misc_feature 2478243..2478584 /locus_tag="lmo2405" /note="Uncharacterized membrane protein [Function unknown]; Region: COG4272" /db_xref="CDD:443413" regulatory complement(2478584..2478617) /regulatory_class="terminator" regulatory 2478595..2478628 /regulatory_class="terminator" gene complement(2478623..2479465) /locus_tag="lmo2406" /db_xref="GeneID:987489" CDS complement(2478623..2479465) /locus_tag="lmo2406" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465929.1" /db_xref="GeneID:987489" /translation="MVTIGLTGWSDHDSLLQTKKLTLADYAAHFPVVEVDTSFYAIPS PRTTANWAAQTPDDFRFVIKAFSAMTKHKEWSQYFDSENAMYTAYMDMIAPISETGKL QAILFQFPPYFNCTKENVTYLKYIASKMGDLPVAVEFRHNSWYNEQNTEKTLDLLREL GFIHTVVDEPQVGAGSVPIVLRETNSDMTLVRLHGRNQYGWMKANSPEWREVRTLYRY NEEEINEWAKYVEHLQKLSKEVVVIFNNNSGGDAADNAKHLQKALQVEFQGLAPMQMD LFSE" misc_feature complement(2478665..2479465) /locus_tag="lmo2406" /note="Sugar isomerase-related protein YecE, UPF0759/DUF72 family [General function prediction only]; Region: YecE; COG1801" /db_xref="CDD:441406" regulatory complement(2479475..2479480) /regulatory_class="ribosome_binding_site" regulatory complement(2479560..2479593) /regulatory_class="terminator" gene complement(2479607..2479921) /locus_tag="lmo2407" /db_xref="GeneID:987488" CDS complement(2479607..2479921) /locus_tag="lmo2407" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2407" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465930.1" /db_xref="GeneID:987488" /translation="MAEIKYLEGMYQDSFFPTFLVDKLKQYMFDTVQFLEQGNHDTEA IQAKFDEMTLAINALQDEFYENESELETGARDSIAETIIPILAHYKIDIDIEELLRER EW" misc_feature complement(2479610..2479921) /locus_tag="lmo2407" /note="Family of unknown function (DUF5713); Region: DUF5713; pfam18977" /db_xref="CDD:436881" regulatory complement(2479929..2479934) /regulatory_class="ribosome_binding_site" regulatory 2480310..2480315 /regulatory_class="ribosome_binding_site" gene 2480325..2480528 /locus_tag="lmo2408" /db_xref="GeneID:987486" CDS 2480325..2480528 /locus_tag="lmo2408" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="repressor protein" /protein_id="NP_465931.1" /db_xref="GeneID:987486" /translation="MVVTNIVKIIREKKGITQNELAHSLDVSRQTIHAIEKGKYNPSL ELSLKIAKFFDLPVEEIFNLEGE" misc_feature 2480325..2480522 /locus_tag="lmo2408" /note="DNA-binding transcriptional regulator, XRE-family HTH domain [Transcription]; Region: XRE; COG1476" /db_xref="CDD:441085" regulatory 2480519..2480524 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2408" gene 2480531..2480944 /locus_tag="lmo2409" /db_xref="GeneID:987484" CDS 2480531..2480944 /locus_tag="lmo2409" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2409" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465932.1" /db_xref="GeneID:987484" /translation="MRKYSVKKFSIVFISMIAAILLFSIISEESFVVTPLNLFTAVLI AASAYIITGLFTPKEKLIGEMKEEKRNADERYIFNKGKISYFFLLFLAILTPFLLAFL KYRNISSVSIKSLAIIFVCIFCLYIVVLQFYKKKK" regulatory complement(2480978..2481017) /regulatory_class="terminator" regulatory 2480989..2481028 /regulatory_class="terminator" gene complement(2481023..2481574) /locus_tag="lmo2410" /db_xref="GeneID:987480" CDS complement(2481023..2481574) /locus_tag="lmo2410" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2410" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465933.1" /db_xref="GeneID:987480" /translation="MKLKEGIFFKIVICFVTIFICLTPLSTSVSAHASVNREDGKEGN TLEQTVSVDKENPDLFVNQSVENNGPKRLFANQTESGGSKYKFVTKQTVSLAAANNIY SLAFLAAGGALGRVAKSTIAAAASSIVGGGASLLKKYNYMRQTIYKYSTKKEDKYKVI NEYLYTKNGKPGKITTSYSTVRK" regulatory complement(2481582..2481587) /regulatory_class="ribosome_binding_site" regulatory complement(2481690..2481720) /regulatory_class="terminator" gene complement(2481732..2483126) /locus_tag="lmo2411" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987479" CDS complement(2481732..2483126) /locus_tag="lmo2411" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465934.1" /db_xref="GeneID:987479" /translation="MTEIPEIGEYQYGFHDKDTSVFRTERGLTEKVVREISNIKEEPE WMLEFRLKSLEQFYKMPMPTWGGDLSELKFEDITYYVKPSEQTVRSWDEVPEEIKRTF DKLGIPEAEQKYLAGASAQYESEVVYHNMKQDLEDLGIVFKDTDSALKENEDIFKEYF AKVIPPSDNKFAALNSAVWSGGSFIYVPPGIKVDTPLQAYFRINSENMGQFERTLIIV DENASVNYVEGCTAPVYTTNSLHSAVVEIIVKPGAYCRYTTIQNWANNVYNLVTKRTF CEENATMEWIDGNIGSKLTMKYPAVHLRGEGARGTTLSIAIAGKGQRQDAGAKMMHYA PNTSSTIVSKSISKQGGNVTYRGIVHFGRNADGARSNIECDTLIMDNLSTSDTIPYNE ILNSNISLEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVE MNRLIKFEMEGSIG" misc_feature complement(2481762..2483105) /locus_tag="lmo2411" /note="FeS assembly protein SufB; Region: sufB; TIGR01980" /db_xref="CDD:131035" regulatory complement(2483134..2483139) /regulatory_class="ribosome_binding_site" gene complement(2483149..2483592) /locus_tag="lmo2412" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987478" CDS complement(2483149..2483592) /locus_tag="lmo2412" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465935.1" /db_xref="GeneID:987478" /translation="MTSRKLDQLYRQVIMDHYKNPRNNGELPDSDVTIDLNNPTCGDQ IHLHLKMDGDKIVAAKFTGSGCSISMASASMMTQSIIGKTEKEALKMSREFSEMVQGH DHETIDEYGDVEALAGVAKFPARIKCATLSWKAMERAIFEKEGTK" misc_feature complement(2483170..2483577) /locus_tag="lmo2412" /note="SUF system FeS assembly protein, NifU family; Region: SUF_scaf_2; TIGR01994" /db_xref="CDD:273918" misc_feature complement(order(2483209..2483214,2483218..2483223, 2483389..2483391,2483395..2483397,2483467..2483472, 2483545..2483550,2483557..2483568)) /locus_tag="lmo2412" /note="trimerization site [polypeptide binding]; other site" /db_xref="CDD:143480" misc_feature complement(order(2483209..2483211,2483395..2483397, 2483470..2483472)) /locus_tag="lmo2412" /note="active site" /db_xref="CDD:143480" gene complement(2483589..2484815) /locus_tag="lmo2413" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987477" CDS complement(2483589..2484815) /locus_tag="lmo2413" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_465936.1" /db_xref="GeneID:987477" /translation="MIDIQKIRADFPILAQEINEKPLAYLDNAATSQKPKQVIEALTH YYEFDNANVHRGVHTLAARATDAYESARGKVAKFIHAREVAEIIFTRGTTSAINLVVD SYAEANIEAGDEIVISYLEHHSNLIPWQQLAKRKGAVLKYIELEEDGTISVEQAKKTI GEKTKIVALAHVSNVLGTITPIKEIAAIAHQFGAVILVDGAQAVPHMEVDVVDLDADF YAFSGHKMMAPTGIGALYGKRELLDAMEPTEFGGEMIDFVELYDSTWKELPWKFEAGT PIIGGAIALGAAIDYLAEVGLENIHAHEQALASYAMEEMSKIEGITIYGPKDASKRCG LVTFNLEGAHPHDIATILDEDGVAIRAGHHCAQPLMKWLDVSSTARASFYIYNTKEEI DALIDGLKLTKEYFGL" misc_feature complement(2483595..2484800) /locus_tag="lmo2413" /note="cysteine desulfurases, SufSfamily; Region: sufS; TIGR01979" /db_xref="CDD:131034" misc_feature complement(order(2484141..2484146,2484150..2484152, 2484210..2484215,2484219..2484221,2484450..2484452, 2484525..2484527,2484534..2484539)) /locus_tag="lmo2413" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99746" misc_feature complement(2484141..2484143) /locus_tag="lmo2413" /note="catalytic residue [active]" /db_xref="CDD:99746" regulatory complement(2483603..2483608) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2413" gene complement(2484816..2486117) /locus_tag="lmo2414" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987475" CDS complement(2484816..2486117) /locus_tag="lmo2414" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aminotransferase" /protein_id="NP_465937.1" /db_xref="GeneID:987475" /translation="MAQNMTIKDDFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFV DKTKITRWNFTKFETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQL QQELVDQGVIFTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVP KNVEVKSPIQAVFVQDKAESPLVNHVLLVADDNSAVTYVENYVTVNNEPKGIVSIVEE VIAEKNARITFGGVDNLASEVTAYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLM GDGSSADVKTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIK HGASKSDAQQESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSR GISQKEAERLVIHGFLDPVVRQLPIESVKTMLREVIEGKVR" misc_feature complement(2484819..2486006) /locus_tag="lmo2414" /note="Fe-S cluster assembly scaffold protein SufB [Posttranslational modification, protein turnover, chaperones]; Region: SufB; COG0719" /db_xref="CDD:440483" regulatory complement(2484826..2484832) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2414" regulatory complement(2486126..2486131) /regulatory_class="ribosome_binding_site" gene complement(2486136..2486921) /locus_tag="lmo2415" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987473" CDS complement(2486136..2486921) /locus_tag="lmo2415" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465938.1" /db_xref="GeneID:987473" /translation="MATLKIQDLHVEIEGKEILKGVNLEISTGEIHAIMGPNGTGKST LSSAIMGHPKYEVTQGTITLDGEDVLEMEVDERARAGLFLAMQYPSEISGVTNAEFIR AAINSRREEGDEIPVMQFIRKLDAKMDILDMDEEMAERYLNEGFSGGEKKRNEILQLL MIEPKLAILDEIDSGLDIDALKVVSKGVNEMRGEGFGCLIITHYQRLLNYITPDFVHV MMQGKVVKEGGPELAKRLEAEGYDWIKQELGIELEEEEAVDQQ" misc_feature complement(2486184..2486912) /locus_tag="lmo2415" /note="Fe-S cluster assembly ATPase SufC [Posttranslational modification, protein turnover, chaperones]; Region: SufC; COG0396" /db_xref="CDD:440165" regulatory complement(2486930..2486935) /regulatory_class="ribosome_binding_site" regulatory 2487246..2487251 /regulatory_class="ribosome_binding_site" gene 2487261..2488337 /locus_tag="lmo2416" /db_xref="GeneID:987472" CDS 2487261..2488337 /locus_tag="lmo2416" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2416" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465939.1" /db_xref="GeneID:987472" /translation="MKKAIMAATIFVLLLATLSGCSSPKSDFTAALQKTAENRQYTTN VTFQVNNLSDSYIKKLGPEIDLNQLKKSNIQYKISVDSDSSSSYSASSIHWKGKKPLD LTIHALQNSDDGKAYIPVSDFYDASDSISSLLPDSAARIFNQVLDQNKDLESKYLNLF ETIQNFSNQTIDTETVDRQAKVLKKIEETAGIAIYSYLNDLDDQHFTSKDNGDIILKL SKNEISDLVNAVLTKLDDNGSVVALIGEIDGSTQKAAKKKWNNAQKSIQSSLKALTKN KAQTLDFKLILTPDSKKGFSKAIITTNFEDTKTKDLMDFTTTIDMLNYEKVPPMPEGK EIVSKKELDKAISDGLKLYLSSAQ" regulatory complement(2488332..2488367) /regulatory_class="terminator" regulatory 2488343..2488378 /regulatory_class="terminator" gene complement(2488379..2489209) /locus_tag="lmo2417" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987469" CDS complement(2488379..2489209) /locus_tag="lmo2417" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter substrate-binding protein" /protein_id="NP_465940.1" /db_xref="GeneID:987469" /translation="MKKVLGLIFTLSLVLVLTACGGSSDKASSSKDDKQLVVGASNTP HAQILEQAKPILKDKGIDLKIVKYTDYVMPNKALEEGDLDANYFQHKPYLELEEKEKG YKFADVGAIHIEPMGIYSKKVKDIKDLKDGAQVLLSNSKSDWPRVIGIFVDNGLLTLK DGVKPQDATFDDIKDNPKNLKFKYDFDPAYLMTAYNNEEGDVVAINSNFVVDQGLNPS KDAIAIESKDSPYANIVVTTEKKKDDKNITELVKVLHSKEIQDYITKEWDGAVVPVDK " misc_feature complement(2488388..2489209) /locus_tag="lmo2417" /note="ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]; Region: NlpA; COG1464" /db_xref="CDD:441073" regulatory complement(2489217..2489222) /regulatory_class="ribosome_binding_site" gene complement(2489274..2489948) /locus_tag="lmo2418" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987468" CDS complement(2489274..2489948) /locus_tag="lmo2418" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter permease" /protein_id="NP_465941.1" /db_xref="GeneID:987468" /translation="MSKLQELFPNVDFQMMWVATQETLYMTLVSLFAVFLLGIVLGLL LFLTNNKKHAGARILYWVTAILVNVFRSIPFIILIVLLLPMTKSLVGTVIGPKAALPA LIISAAPFYGRMVEIAFREVDKGVIEAAKSMGANMFTIIGKVLIPEALPAIISGITVT AISLVGFTAMAGVIGAGGLGNTAYLEGFQRGQPDVTVLATIIILIIVFIFQFIGDFLT KRTDKR" misc_feature complement(2489277..2489912) /locus_tag="lmo2418" /note="ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; Region: MetP; COG2011" /db_xref="CDD:441614" gene complement(2489945..2490967) /locus_tag="lmo2419" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987467" CDS complement(2489945..2490967) /locus_tag="lmo2419" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_465942.1" /db_xref="GeneID:987467" /translation="MITLQNVVKEYTSRNNKVLAVDHVDLEIEQGEIFGVVGYSGAGK STLIRMFNGLELPSAGTVEVDNLLISQIRGSKLRKARQQIGMIFQHFNLLWSRTVAEN IAFPLEIAGVRGEKRRFRVNELIRLVGLEGKENAYPAELSGGQKQRVGIARALANNPK VLLCDEATSALDPQTTDEVLELLLDINKRLNLTIIVITHEMHVIRKICNRVAVMENGK VVELGDVLDVFRHPQEKVTQRFVRQVTDSDETEELIHLLLDNYAEGKIVKLLFMSENA TQPVISQVAKENDVMLNVLHGNLTQTQNGAYGTLYVQVLGTEDAINASLTQLRQLKVE TEVLER" misc_feature complement(2489954..2490967) /locus_tag="lmo2419" /note="ABC-type methionine transport system, ATPase component [Amino acid transport and metabolism]; Region: AbcC; COG1135" /db_xref="CDD:440750" regulatory complement(2489959..2489964) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2419" regulatory complement(2490976..2490981) /regulatory_class="ribosome_binding_site" gene 2491058..2491176 /locus_tag="lmos88" /db_xref="GeneID:18245172" misc_RNA 2491058..2491176 /locus_tag="lmos88" /product="SAM" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245172" gene complement(2491285..2491473) /locus_tag="lmo2420" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987465" CDS complement(2491285..2491473) /locus_tag="lmo2420" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2420" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465943.1" /db_xref="GeneID:987465" /translation="MKKHIVLIVVACITVIAVFMYIVQINNSELKYQNRAQIKIASQM ASQNEQTDNSIVSEITYK" regulatory complement(2491479..2491484) /regulatory_class="ribosome_binding_site" gene complement(2491552..2492694) /locus_tag="lmo2421" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987464" CDS complement(2491552..2492694) /locus_tag="lmo2421" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component sensor histidine kinase" /protein_id="NP_465944.1" /db_xref="GeneID:987464" /translation="MKSKLELLFTKISHVMNVWQATFFAAVSWVLALITIQTIYLWSI SIRDDSLFLREVSQAIVQLFGTNKYTRIMQSFWMMSLKFLIIFLIACLFFAFFYRLMR QRILKKQLRTINFALNDGKPVDTESFVPEIQELERNIENMRERQKKLMQQEEQAQQAR NDLITNVSHDLRTPLTSILGYLSYIHEDRYRDEIELRYYTELVYGKARHLHKLIDDLF SYTRLDSVDYQLKKDELDIVELLRQLVAEYDGRAAERNMQIVEHFDANKLIIGGDGNQ IMRLFENLFSNALRYGEGNKQIDVSAKKEDNMAVVRVTNYGEEIPNVDLPYLFERFYK VDKNRTTTGTGLGLAIAKSIVEKHGGIVTAESKKRQTSFIVKLPLI" misc_feature complement(2491558..2492694) /locus_tag="lmo2421" /note="Sensor histidine kinase WalK [Signal transduction mechanisms]; Region: WalK; COG5002" /db_xref="CDD:444026" gene complement(2492684..2493379) /locus_tag="lmo2422" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987463" CDS complement(2492684..2493379) /locus_tag="lmo2422" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="NP_465945.1" /db_xref="GeneID:987463" /translation="MTTSILIADDDKEIVDLVKLYLQNEGYTIYQAYDGAEVWRLVQE KQPTLVILDIMMPEMNGLEVCRLMRDNGILTPILMLSAKAEDNDKIMGLLTGADDYMV KPFNPLELSVRVKAILRRMQQMSQAEPVSQDKVIIGPIVVDRGLHVVTVGGKELHLTT SEFDILFLLASEPGRVFSSEYIFEKIWQEKALGASKTVMVHISNLRDKLREAMGGENV IKTIWGVGYKIEI" misc_feature complement(2492717..2493367) /locus_tag="lmo2422" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" regulatory complement(2492703..2492708) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2422" regulatory complement(2493386..2493392) /regulatory_class="ribosome_binding_site" gene complement(2493454..2494329) /locus_tag="lmo2423" /db_xref="GeneID:987460" CDS complement(2493454..2494329) /locus_tag="lmo2423" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465946.1" /db_xref="GeneID:987460" /translation="MNHSNLTILSVCSNFVIVVLKLIVGFFTGSVAVISEGIHSSMDL FASIITFFSIRISNQPADEDHPYGHGKAENIAGTIETLLIFVAGIWIIVESVNKLVNP HEIRFPALGIMVMLFGAIVNIIVSRIIKKAADEANSVAMKSNALHLYTDVFTSLGIAL SLFLVYITGWLWLDPVIAILTAFYIMYEAYKLLKESFPPLMDKRLSADEEEAIKQIIL AHKTRFIEFHDFRSRRAGAEEYIDFHLVVSSSMTIESAHSLCDEIEAEIMNFYAKAEV LIHLEPEEERVLTRI" misc_feature complement(2493472..2494311) /locus_tag="lmo2423" /note="Divalent metal cation (Fe/Co/Zn/Cd) efflux pump [Inorganic ion transport and metabolism]; Region: FieF; COG0053" /db_xref="CDD:439823" regulatory complement(2494338..2494343) /regulatory_class="ribosome_binding_site" gene complement(2494522..2494806) /locus_tag="lmo2424" /db_xref="GeneID:987459" CDS complement(2494522..2494806) /locus_tag="lmo2424" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="NP_465947.1" /db_xref="GeneID:987459" /translation="MRTAQKKGEDFVVFFFTPMCGSCQIASRLVDVVIEADGIQTEVA KVNLNYVPDIAQSLEITSVPALVKFKNGQPADLSYQLHDATAIFEFLYSE" misc_feature complement(2494579..2494803) /locus_tag="lmo2424" /note="TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox...; Region: TRX_family; cd02947" /db_xref="CDD:239245" misc_feature complement(order(2494738..2494740,2494747..2494749)) /locus_tag="lmo2424" /note="catalytic residues [active]" /db_xref="CDD:239245" regulatory complement(2494815..2494820) /regulatory_class="ribosome_binding_site" regulatory complement(2494854..2494881) /regulatory_class="terminator" gene complement(2494891..2495268) /locus_tag="lmo2425" /db_xref="GeneID:987446" CDS complement(2494891..2495268) /locus_tag="lmo2425" /experiment="EXISTENCE:[PMID:19448609]" /note="part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor" /codon_start=1 /transl_table=11 /product="glycine cleavage system protein H" /protein_id="NP_465948.1" /db_xref="GeneID:987446" /translation="MSLPKDLLYTEEHEWVKADDGSYVIGITDFAQDQLGDIVFVELP EVGDTVTKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILK LEEVEEADVKALLSSDDYEKVLD" misc_feature complement(2494894..2495268) /locus_tag="lmo2425" /note="Glycine cleavage system protein H (lipoate-binding) [Amino acid transport and metabolism]; Region: GcvH; COG0509" /db_xref="CDD:440275" regulatory complement(2495276..2495281) /regulatory_class="ribosome_binding_site" gene complement(2495309..2495662) /locus_tag="lmo2426" /db_xref="GeneID:987443" CDS complement(2495309..2495662) /locus_tag="lmo2426" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465949.1" /db_xref="GeneID:987443" /translation="MINFYWYPKCSTCKKAKAWLENEHVDFNEVDIKTETPTAEELQQ WHEASGLPVRRFFNTSGIKYRELGLKDKLDTLSPEEAYKLLASDGMLIKRPLTTNGKE VTLGFKEEEFEATWK" misc_feature complement(2495327..2495659) /locus_tag="lmo2426" /note="Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX)...; Region: ArsC_like; cd03036" /db_xref="CDD:239334" misc_feature complement(order(2495342..2495344,2495381..2495383, 2495489..2495491,2495633..2495635)) /locus_tag="lmo2426" /note="putative ArsC-like catalytic residues [active]" /db_xref="CDD:239334" misc_feature complement(order(2495624..2495626,2495633..2495635)) /locus_tag="lmo2426" /note="putative TRX-like catalytic residues [active]" /db_xref="CDD:239334" regulatory complement(2495670..2495675) /regulatory_class="ribosome_binding_site" regulatory complement(2495779..2495813) /regulatory_class="terminator" gene complement(2495818..2496993) /locus_tag="lmo2427" /db_xref="GeneID:987438" CDS complement(2495818..2496993) /locus_tag="lmo2427" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division protein FtsW" /protein_id="NP_465950.1" /db_xref="GeneID:987438" /translation="MNQQNKLAGRIDYGIVLSMMLLMIISLVSIYSAQLTNNQYDANF VVKQAMWFVVSTFAIIVVMQLDYDRLTKWAYYFYGLGLFLLVFVLLFGKEVKGAKSWI VIPFLGNIQPSEVVKVILIVVLAKVIWDHNRTYKIHRFSYDAWLLLKIGLFTLMPLIL IMLQPDLGTALVFIAIMSGMILISGITWKIIVPLFGSIAAIGTALIWMVIYHQNWLTS LGFKPYQFERITTWINPENDPQGGGYQVLRAMTAIGSGQISGNGAGYDAIAIPENHND FIFTIVAGDYGFIGASILLAIYFLLIYQIIRVALDVGVPFYSYICTGVVMMLMFHVLE NVGMNIGLLPITGIPLPFISYGGSALLGNMMAVGLVLGIRFNFKKSMFEVKEENHAS" misc_feature complement(2495860..2496960) /locus_tag="lmo2427" /note="rod shape-determining protein RodA; Region: rodA_shape; TIGR02210" /db_xref="CDD:274033" regulatory complement(2497003..2497008) /regulatory_class="ribosome_binding_site" gene complement(2497069..2498238) /locus_tag="lmo2428" /db_xref="GeneID:987433" CDS complement(2497069..2498238) /locus_tag="lmo2428" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division protein FtsW" /protein_id="NP_465951.1" /db_xref="GeneID:987433" /translation="MARNRKKAVRIDYSIIFLMMLLCIIGLVAIYVAGLVNDQYTNNF LLQQSIWIVISTGVVVVIVLFFDYDKLQWAAYYLYGIGNLLLVLVLIVGDERKGSKSW ISIGSLGSLQPSELMKSFLILALAKVIWDHNKKYKLHTVSLDMQLLLKIGIVSILPLG LVALQPDLGTILVFIAIIIGMVFISGVTWKILLPVFSSIALIGGTLIYLVMYNQEFLQ KLGFKPYQFKRITSWLRPEEDPLGDGMQLLRSMQAIGSGQLQGNGIGNQAIAIPENHN DFIFSIIGGNFGFIGGCVLIMLYFLLIYQIIRVALDINIPFYSYICTGVCSMILFHVL ENIGMTIGLLPITGIPLLFVSYGGSSLLGAFMALGLVLSARYNAPEVNLGKENRF" misc_feature complement(2497102..2498205) /locus_tag="lmo2428" /note="rod shape-determining protein RodA; Region: rodA_shape; TIGR02210" /db_xref="CDD:274033" regulatory complement(2498246..2498251) /regulatory_class="ribosome_binding_site" regulatory complement(2498268..2498307) /regulatory_class="terminator" gene complement(2498381..2499172) /locus_tag="lmo2429" /db_xref="GeneID:987431" CDS complement(2498381..2499172) /locus_tag="lmo2429" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ferrichrome ABC transporter ATP-binding protein" /protein_id="NP_465952.1" /db_xref="GeneID:987431" /translation="MKSALELKNVSFSRKRDFEMKNVSASIPEGKITTLIGPNGSGKS TMLRLMMRLLTPDSGEILLNEKNITEIPSKDLAKKMTMLSQAPEGLVDVMVHDLVAYG RLPHRSWLSTLQEEDEAVIHWAIKVCNLEELAYRPLHSLSGGERQRAWLAMALAQKTP ILLLDEPTTYLDIAHQLELLDLLVHLNKEYNLTIVLVLHDLNQAAIYSDHVFVCENGQ LVKDGSPREVFTTELLRDVFHITADITEKDGKQHIHPLASTRFEY" misc_feature complement(2498408..2499163) /locus_tag="lmo2429" /note="ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component [Inorganic ion transport and metabolism, Coenzyme transport and metabolism]; Region: FepC; COG1120" /db_xref="CDD:440737" gene complement(2499169..2500179) /locus_tag="lmo2430" /db_xref="GeneID:987428" CDS complement(2499169..2500179) /locus_tag="lmo2430" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ferrichrome ABC transporter permease" /protein_id="NP_465953.1" /db_xref="GeneID:987428" /translation="MTTVKAHDPRRKRRRITFIVVIVLLILAFFYGLTTGSVKVTYSD AWQTLTGGGSDLANQLIWNLRLPRLLIAFLVGAALAIAGCLLQGVMRNPLADPGVIGV SAGGGFVAILMTLAFPALASFVPIGAFLGAFGTAILIYLLAWDRGVSPLRVILSGVAI NAFIGAMTSGVMVLYSNRVQSVISWMTGTLSGKSWYHLDMIWPYMLVGFVLSGFAIRS SNVLLLGDDAAKLLGFSVERHRFFIIMLAAFLSGVAVSVAGLIGFVGLVVPHIFRLII GNDYKYLLPLSALGGALLVGFADTAARSWFGSIELPVGILLAMIGAPFFLFLLQRGRV AS" misc_feature complement(2499181..2500086) /locus_tag="lmo2430" /note="ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]; Region: FepD; COG0609" /db_xref="CDD:440374" regulatory complement(2499181..2499186) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2430" gene complement(2500179..2501150) /locus_tag="lmo2431" /db_xref="GeneID:987425" CDS complement(2500179..2501150) /locus_tag="lmo2431" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ferrichrome ABC transporter substrate-binding protein" /protein_id="NP_465954.1" /db_xref="GeneID:987425" /translation="MKKITILMLSITAALLLASCGNDTTTDMNNETTKTENKSQAALT ITDMAGRDVSFDKKPERIIALTNADMNIIYALGGTVVGRQTTDASGVPDGAKKATEVG NTHDLNLEKIASLGADAIVASSEQNLKDVPAMEGVGPKVVLTGANSIDEIKKQTAVLG KLLGKETKAKELEANIDQKVAEVKKKQQGKKVRSLLVLGAPGSNYAALPSSLSGNVLE IAGGENVAKDFKGVENFPQYASMNVEKIVAADPEVIFLMIHGGDEKETEAAFKKEMKQ NEAWNSTSAVKNDHIVVLPAELFGTNPGIKIDQALDYMTDEINKVDN" misc_feature complement(2500197..2500970) /locus_tag="lmo2431" /note="ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism]; Region: FepB; COG0614" /db_xref="CDD:440379" regulatory complement(2500187..2500192) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2431" regulatory complement(2501157..2501162) /regulatory_class="ribosome_binding_site" regulatory 2501291..2501296 /regulatory_class="ribosome_binding_site" gene 2501306..2501470 /locus_tag="lmo2432" /db_xref="GeneID:987423" CDS 2501306..2501470 /locus_tag="lmo2432" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2432" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465955.1" /db_xref="GeneID:987423" /translation="MTDNLFPNLSHENCKETMPPVTTEQFKEAAILEKNRKLEEILNI VDKKKPNIKK" regulatory 2501589..2501594 /regulatory_class="ribosome_binding_site" gene 2501603..2502361 /locus_tag="lmo2433" /db_xref="GeneID:987422" CDS 2501603..2502361 /locus_tag="lmo2433" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acetylesterase" /protein_id="NP_465956.1" /db_xref="GeneID:987422" /translation="MAILELNFKSVCLAMQTSVTVILPETDALYHGSIPKYKTLYILH GLSNNHTTYVRNTNIERYATEKGLAVIMPAADHSFYSNMVHGRDFFEFVSTELPHVMK NWFPLSDKKEDTFIAGHSMGGYGAFKVALTFPEKFQAAASMSGVMDINYIIKEDCFEN FSTRAITGEMASQTGTENDLFHLLETNLQNQVPLPALFQNCGTEDFLYEDNLRFRDFA LEKNAPLEYREGPGDHDWEFWDKSIKEIINWLPL" misc_feature 2501609..2502355 /locus_tag="lmo2433" /note="S-formylglutathione hydrolase FrmB [Defense mechanisms]; Region: FrmB; COG0627" /db_xref="CDD:440392" regulatory complement(2502357..2502396) /regulatory_class="terminator" regulatory 2502368..2502407 /regulatory_class="terminator" gene complement(2502401..2503804) /locus_tag="lmo2434" /db_xref="GeneID:987419" CDS complement(2502401..2503804) /locus_tag="lmo2434" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glutamate decarboxylase" /protein_id="NP_465957.1" /db_xref="GeneID:987419" /translation="MLYSEDDKRKQESYRIPLFGSEEESTSIPKYVLKKEPMEPRIAY QLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCV NILADLWNAPKDMSYLGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLII SSGYQVCWEKFCVYWDVDMRVVPMDKNHLSLDVDKVFDLVDEYTIGVVGILGITYTGK FDDIQLLDEKVEAYNETNEHQLVIHIDGASGAMFTPFVNPELPWDFRLKNVVSINTSG HKYGLVYPGVGWILWKDKEYLPKELIFEVSYLGGSMPTMAINFSRSASQIIGQYYNFL RYGFEGYREIHEKTKKTAIYLAKTVEKSGYFEIINDGANLPIVCYKMKEGLDVEWTLY DLADQLLMKGWQVPAYPLPADLSDTIIQRFVCRADLGYNVAEEFAADFADAIHNLEHA RVLYHDKERNDSYGFTH" misc_feature complement(2502461..2503756) /locus_tag="lmo2434" /note="Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the...; Region: AAT_I; cl18945" /db_xref="CDD:450240" misc_feature complement(order(2502971..2502973,2502980..2502982, 2503061..2503063,2503070..2503072,2503175..2503177, 2503418..2503420,2503427..2503432)) /locus_tag="lmo2434" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:99743" misc_feature complement(2502971..2502973) /locus_tag="lmo2434" /note="catalytic residue [active]" /db_xref="CDD:99743" regulatory complement(2503812..2503817) /regulatory_class="ribosome_binding_site" regulatory 2503919..2503924 /regulatory_class="ribosome_binding_site" gene 2503931..2504236 /locus_tag="lmo2435" /db_xref="GeneID:987418" CDS 2503931..2504236 /locus_tag="lmo2435" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465958.1" /db_xref="GeneID:987418" /translation="MFDLIFPLLLIILGVIYRINPPKNKESRFSYRTKASLKNEISWQ KAHQSLGFYWIVIGVSLLVLSLVLAFIPMHAFVRSSILLTTSIFAVLLSVILVEKKL" misc_feature 2504015..2504221 /locus_tag="lmo2435" /note="SdpI/YfhL protein family; Region: SdpI; pfam13630" /db_xref="CDD:463940" regulatory complement(2504244..2504262) /regulatory_class="terminator" gene complement(2504300..2505157) /locus_tag="lmo2436" /db_xref="GeneID:987417" CDS complement(2504300..2505157) /locus_tag="lmo2436" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcription antiterminator" /protein_id="NP_465959.1" /db_xref="GeneID:987417" /translation="MIIKKILNNNVVIAEGKSGKESVVMGRGLAFQKKIGDEVEVANI EKTFVMETHELSEKLSELLSEIPLKHLRVADDVVQYAQETLETDLSDNIYLTLTDHIN FAVSRYNQGINLKNALLWEIKRFYHAEYLVGMKALDFIEQEVGIRLDEDEAGFIALHI VNARQDGQQMHMTVAMTQIVQDILSIVTYHYGMVLDETSLNYTRFITHLQYFAQRLLR KEIVDSGDDFLYEQVQIKYPEAFKCTKKIDAYLINTHHTELTRDERVYLTIHIYRVTE RNTIIKEEE" misc_feature complement(2504324..2505157) /locus_tag="lmo2436" /note="transcriptional antiterminator BglG; Provisional; Region: PRK09772" /db_xref="CDD:170086" regulatory complement(2505167..2505172) /regulatory_class="ribosome_binding_site" regulatory 2505410..2505415 /regulatory_class="ribosome_binding_site" gene 2505425..2505835 /locus_tag="lmo2437" /db_xref="GeneID:987416" CDS 2505425..2505835 /locus_tag="lmo2437" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2437" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465960.1" /db_xref="GeneID:987416" /translation="MATRSEQIFINLPVKDLQATVAFFTELGYEFNPQFTDENATQML IGDNIFAMLLKEDFFQTFHKEGIADTTKAREVLITITQDSRQAVDKLVDRAFEIGAKQ AGETQDYDFMYSRSFLDLDNHLWEIAYLDESALK" misc_feature 2505443..2505814 /locus_tag="lmo2437" /note="uncharacterized subfamily of vicinal oxygen chelate (VOC) family; Region: VOC_like; cd09012" /db_xref="CDD:319954" regulatory 2505847..2505886 /regulatory_class="terminator" gene complement(2505858..2506370) /locus_tag="lmo2438" /db_xref="GeneID:987412" CDS complement(2505858..2506370) /locus_tag="lmo2438" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2438" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465961.1" /db_xref="GeneID:987412" /translation="MARPKNKVELLQQSTEKYQQLNDLINSIPKEKQQLTFPFEDRDK NIRDVVIHLHEWHKMALDWYEVGMGGKKPFMPAEGFTWKTTPELNLVIWQKYQETDLA QARELLDETHNKEMVLIAGHSEEELFTKKYYKWTNTTSLGAIFISSTSSHYDWAIKKI RKFKKAAGIK" misc_feature complement(2505867..2506367) /locus_tag="lmo2438" /note="Uncharacterized conserved protein DfsB/IRC4, DUF1706 (PF08020) domain [General function prediction only]; Region: DfsB; COG4283" /db_xref="CDD:443424" regulatory complement(2506380..2506385) /regulatory_class="ribosome_binding_site" regulatory 2506482..2506487 /regulatory_class="ribosome_binding_site" gene 2506494..2506835 /locus_tag="lmo2439" /db_xref="GeneID:987411" CDS 2506494..2506835 /locus_tag="lmo2439" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2439" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465962.1" /db_xref="GeneID:987411" /translation="MKKIVILIISLLLLVGIGFGVYYFKNANHIGADVSYIKITTDGE KGKNVSFNYSYTMPAYDEAGKETEVTFSADKNLRKGAYLKLYIKEDKGVTSYEEVPEK EVPSKAAEKLK" misc_feature 2506551..2506829 /locus_tag="lmo2439" /note="Uncharacterized conserved protein YxeA, DUF1093 family [Function unknown]; Region: YxeA; COG5294" /db_xref="CDD:444097" regulatory 2506844..2506873 /regulatory_class="terminator" gene complement(2506867..2507250) /locus_tag="lmo2440" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987409" CDS complement(2506867..2507250) /locus_tag="lmo2440" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2440" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465963.1" /db_xref="GeneID:987409" /translation="MILQETKEVFGKKIRANNANFSPIAELWGEVMVDKPAGDIFAVY SNYASDYKGDYDLLVGTKDWDEEKSVLIEVGDYLVFSVDNASHKGVEETWQKIWARDS ELKRAYKTDFEWYHTSGEIDIYISI" misc_feature complement(2506870..2507241) /locus_tag="lmo2440" /note="Predicted transcriptional regulator YdeE, contains AraC-type DNA-binding domain [Transcription]; Region: YdeE; COG3708" /db_xref="CDD:442922" regulatory complement(2507260..2507265) /regulatory_class="ribosome_binding_site" gene complement(2507306..2508202) /locus_tag="lmo2441" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987408" CDS complement(2507306..2508202) /locus_tag="lmo2441" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_465964.1" /db_xref="GeneID:987408" /translation="MKLERILAILVMILERKVLASELAEKFEVSTRTIYRDMDTLLYA GFPVVALPGKNGGFTMLDTYKLATFTFSEAEKQILLEALEARSEFMLNDSQEILREKI TLLQTEKPTSKHIFFDSATQHRQQIEAEVKRKIAYIQKAFTTNKQLKITYIAMSGAET TREISPQKLNLMDGSWYLEAYCHKRAAIRHFKLTRITSLKEIDKAIMEVEETEYQPAE MKRIVLEFPKNQLGKLLDYFLQEEMETGDDYVRVSFFYDLERNIIPFLLMFGSAVKIL EPASLQKDYKSEVEKLYFNLNC" misc_feature complement(2507327..2508202) /locus_tag="lmo2441" /note="Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains [Transcription]; Region: YobV; COG2378" /db_xref="CDD:441945" regulatory complement(2508210..2508215) /regulatory_class="ribosome_binding_site" gene complement(2508247..2508816) /locus_tag="lmo2442" /db_xref="GeneID:987407" CDS complement(2508247..2508816) /locus_tag="lmo2442" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2442" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465965.1" /db_xref="GeneID:987407" /translation="MRSLRKIVIILIIIGFMYLLIVAAFMFSGSRTKPSENADTVLIL GAKVKGNPAVPSLVLQERLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVN EGIARKRIETETKSKRTEENIKYSNAKFNLGKTVIVTSDYHMYRALMLAKRQGIDASG LPATSQTFAKYKGMMREVLSITYAWVFDH" misc_feature complement(2508250..2508771) /locus_tag="lmo2442" /note="Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family [Cell wall/membrane/envelope biogenesis]; Region: ElyC; COG1434" /db_xref="CDD:441043" regulatory complement(2508826..2508831) /regulatory_class="ribosome_binding_site" gene complement(2508992..2509411) /locus_tag="lmo2443" /db_xref="GeneID:987405" CDS complement(2508992..2509411) /locus_tag="lmo2443" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2443" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465966.1" /db_xref="GeneID:987405" /translation="MYRLLSIAFFGIAVICLLFPWMSSGIDAATFELVYEPAYKLIWM QPIIIVGYLGFLCTIFIPKFQRGKNRIVPFIGILILVLGLLNLAVRPLFGFDSFNFSI IDAYVSELVEPAFLIAVSASILSLIMYAIYLKKSENL" regulatory complement(2509419..2509424) /regulatory_class="ribosome_binding_site" gene 2509854..2510220 /locus_tag="lmos89" /db_xref="GeneID:18245173" misc_RNA 2509854..2510220 /locus_tag="lmos89" /product="ssrA" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245173" gene complement(2510361..2514293) /locus_tag="lmo2444" /db_xref="GeneID:987402" CDS complement(2510361..2514293) /locus_tag="lmo2444" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycosidase" /protein_id="NP_465967.1" /db_xref="GeneID:987402" /translation="MKKGMKQVCVSLAVVPLVWLNLGITQPLQVEVKAEETKKKETQK KANTETAKQLSKEEYAKLSAEEGLGNVLEATVTDNVITLKIDNGDEAEDDYLEISPLA NNLLKVNLRPRNIENSPSTPMIDPNATFTAIGATIDLESDPMIISTDECTLEIDKEPA RMTFKDKNGKTLLSESADGGIFDGGVRFKRGASDHVYGAYGISFSDGDLGMERDDTAA DSNKTAQAGQQGNAGGPFMWSTAGYGLLVDSDGGYPYSVSDEEKLEFYYGDTIVEGRR YVKENVEMYLMSGEPEEIMSSYADVTGHTPMMPKWSLGFSNFEWGTNEAEFRENINTY RAKGIPIDSFAFDYDWKFYGDPTYGGDYGEFAWNTENFPSAKDTTLKSDMDALGVKMI GITKPRVVTNLEDGTATQQGKDADANGYWYPGQSAYEDYAFPVTVRSIDPYNADERNW WWSHSEDALDKGIVGWWNDETDKVSSNGADYWFGNFTTGFTSEAMYEGQRDYTNERVW QTGRTFYPGAQRYSTSTWSGDIGVQWKKGEVIDWANGMQEQPSTMLSTINLGQTKWGM DTGGFNANSGQVLNPDPELYSRWMEFSSLVPVFRTHGNQNQQRQPWFYGGTAEEVAKS SMTWRYSMIPYMYAYERQAYDSGVGLVQPLTFDNPTDENVVNLTDEWMFGDGLLAAPV LEEGAGSRDIYLPAGTWIDYNRGDVYEGNQTINYEVNDDDWTDVPMFVKQGAIMPMQQ PQNYVGESAVKTIYLDTFASDKETSFTHYDDDGKSFDYEKDTYLKQKMTTSKTADTST FTIGAKEGSYKADTENYIVKLHGNAAESVQVNGADSKVYDDLSALENADGSGYAVGSD VYGAVTYVKVPAQADADTVITTSGSASIVQTGTYEMETGSNFADTVADKPVAEKTYVD GYDKDGAGTTIYANVKDSGDYNVDLTYKNASSDNQALSIFVNGEYVKQTTLKPNTDWS VQSETLPLSAGKNSISYKVVTDTGDKADQVSLDKVNIGFTPTVAKVEAEEADLAGTLK VANDHWFYSGEGFVGGFGTAGDEIKFEVDVPADGEYVLNTRTANGTGMPQTLDLYTNG DYNSRVTFPSKGENWNIWSDTEKAVNLKAGTNKITFLRDGETTGNVNIDRILVSAEPI NSPVQSEVNLLDNGGFERDAAATTNWVESHPDGQDKAYGVDSGSGVNPPESPAFGKQS AYFYLPGAYKQTLAQQIAVPVNNANYDVEAWVKVSKDDAAKAQMTVNNYDSSGGKTID LVADDVWHYVTIKDVKVTTGNINTSFQMDSPGGTSIHIDNVRVMPSAE" misc_feature complement(2513769..2514059) /locus_tag="lmo2444" /note="Alpha-glucosidase, N-terminal; Region: AGL_N; pfam16338" /db_xref="CDD:465098" misc_feature complement(2513385..2513738) /locus_tag="lmo2444" /note="N-terminal domain of glycosyl hydrolase family 31 (GH31); Region: GH31_N; cd14752" /db_xref="CDD:270212" misc_feature complement(2513637..2513639) /locus_tag="lmo2444" /note="active site" /db_xref="CDD:270212" misc_feature complement(2512089..2513441) /locus_tag="lmo2444" /note="Glycosyl hydrolases family 31; Region: Glyco_hydro_31; pfam01055" /db_xref="CDD:460044" misc_feature complement(2511831..2512013) /locus_tag="lmo2444" /note="Domain of unknown function (DUF5110); Region: DUF5110; pfam17137" /db_xref="CDD:465360" misc_feature complement(2511273..>2511560) /locus_tag="lmo2444" /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like superfamily; Region: CBM6-CBM35-CBM36_like; cl14880" /db_xref="CDD:449372" misc_feature complement(2510871..2511248) /locus_tag="lmo2444" /note="Carbohydrate Binding Module 35 (CBM35) domains similar to Lmo2446; Region: CBM35_Lmo2446-like; cd04083" /db_xref="CDD:271149" misc_feature complement(order(2510889..2510891,2510985..2510987, 2511150..2511152,2511156..2511161,2511189..2511191)) /locus_tag="lmo2444" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:271149" regulatory complement(2514301..2514306) /regulatory_class="ribosome_binding_site" gene complement(2514308..2515210) /locus_tag="lmo2445" /db_xref="GeneID:987394" CDS complement(2514308..2515210) /locus_tag="lmo2445" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_465968.1" /db_xref="GeneID:987394" /translation="MLFAPTIKAQADTVPLPAPIIEAFPVEAIAEAIAGELDKDSVND TITQADLDTMTAIPLPSLGLTGEDLSVLNNEVFTNAIELAIWSNNIGELPDLSEALPA LENIEANGANITVFPDANYPNLTNVDLSQNNFGFNIPKFVGMEGLVSINMENAGLSGY IAEDIWMNMPNLDSLILNENHLISIPEDIFLSQQLGTHSFANQTATYPPTTIKQGENL KVFVPFIYQALDFIAPSNHDLIIIKDNGRTLYEPPYPTYDGSYMYTIETAGLQPGEHL LEISLGYNSGEYTGWYDFPVTITE" misc_feature complement(<2514644..>2514982) /locus_tag="lmo2445" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature complement(2514842..2514904) /locus_tag="lmo2445" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature complement(2514773..2514841) /locus_tag="lmo2445" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature complement(2514698..2514772) /locus_tag="lmo2445" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature complement(2514656..2514697) /locus_tag="lmo2445" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" gene complement(2515312..2518587) /locus_tag="lmo2446" /db_xref="GeneID:987393" CDS complement(2515312..2518587) /locus_tag="lmo2446" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycosidase" /protein_id="NP_465969.1" /db_xref="GeneID:987393" /translation="MKRRTRKCSLVFILGILIFSCLSGFGTNVFAMDGEYHSPYGDDD LYTVQPTERSPRDPKAGEDVILNITTWPIENGQDVWVEWTKNGVAQENVTAAYDYNSG NNTYWKADLGKFEKGDEITYTTKGSTNGGTAYESGPFTFYVTDWEYVQDVTSVVDNGD SITLNMTATAGDFSPKLYLSFEDLDTLRMELSPTGKETGHAGKSGYTVEDTAEKVTVT TEDLSIEIQKSPYRMEVHQADGTLLTSEYTTANSLGWLTDGKNVINQYQNNFMTPSDE AFYGFGERYDTINQRGKDVETYVYNEYQDQAQTERTYLAVPFFVSANKYGMYVNSDFH SQFQMASKVEDKYSFVLDNDGDMTNMLDYYVISGKDQNDIVNNYTDITGKTTLLPKWA FGLWMSANEWDRESDVSSALSNAKANDIPATGFVLEQWSDEETYYIWNNATYTAKKNG EAFSYDDFTFNGKWTDPKGMVDSVHDAGMNIVLWQVPVLKDDGTVYEQRDNDEEYMIS QGYSADDGTGAPYRVPASQWFGNGILLDFTNKDAVDWWTSQREYLLTEVGIDGFKTDG GEMVWGRDTTFSNGEKGQEMRNRYPTDYVSSYFDFAKSINPEAVSFSRSGTSGAQKSG IYWSGDQTSTFDSFQASLKAGLSASTSGVSYWAWDMAGFTGDYPTAELYKRATAMAAF APIMQFHSEKSDPSPSEERSPWNAVARTGDETILPTFQKYLYTRMNLLPYIYTAAKDT ADNGKSMMRQMAMDYPEDVNARDLDEQYMFGDDLLVAPIVQEGQTEKEVYLPEGEWVD IWNGGVHPGGETISYYADVDTLPVFAKAGAIIPMNMTDGYQLGQNVGNDLKSYDNLTF RVYPSGDSEYSFYDDVNGGEMRDISVSEDFANEKVSVDLPAMADETTMQVFSTEPTSV TIDGADVAKADTLDAFNEATTGYYYDTVQNLTYVKAAAKDAKQAIVLNGVNHAPYEAE FGHLTNVTTASDHAGYTGTGFVAGFDAEKEAVEFDIDAVDGASDYTMEVRYSAGVEDA TRTVYINGKKQQITLPKTANWDTWNTVEVPVTLQAGNNQVVFDFEADDTAGINFDHVV IKK" misc_feature complement(2517850..>2518035) /locus_tag="lmo2446" /note="Alpha-glucosidase, N-terminal; Region: AGL_N; pfam16338" /db_xref="CDD:465098" misc_feature complement(2517439..2517801) /locus_tag="lmo2446" /note="N-terminal domain of glycosyl hydrolase family 31 (GH31); Region: GH31_N; cd14752" /db_xref="CDD:270212" misc_feature complement(2517685..2517687) /locus_tag="lmo2446" /note="active site" /db_xref="CDD:270212" misc_feature complement(2516404..2517441) /locus_tag="lmo2446" /note="CtsY (cyclic tetrasaccharide-synthesizing enzyme Y)-like; Region: GH31_transferase_CtsY; cd06597" /db_xref="CDD:269883" misc_feature complement(order(2516515..2516517,2516599..2516601, 2516698..2516700,2516746..2516748,2516893..2516895, 2517004..2517006,2517136..2517138,2517280..2517282, 2517289..2517291,2517301..2517306,2517388..2517390)) /locus_tag="lmo2446" /note="active site" /db_xref="CDD:269883" misc_feature complement(2515321..2515689) /locus_tag="lmo2446" /note="Carbohydrate Binding Module 35 (CBM35) domains similar to Lmo2446; Region: CBM35_Lmo2446-like; cd04083" /db_xref="CDD:271149" misc_feature complement(order(2515339..2515341,2515435..2515437, 2515594..2515596,2515600..2515605,2515633..2515635)) /locus_tag="lmo2446" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:271149" regulatory complement(2518596..2518601) /regulatory_class="ribosome_binding_site" regulatory 2518957..2518962 /regulatory_class="ribosome_binding_site" gene 2518971..2519879 /locus_tag="lmo2447" /db_xref="GeneID:987392" CDS 2518971..2519879 /locus_tag="lmo2447" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_465970.1" /db_xref="GeneID:987392" /translation="MQNIGDTLKFIRKSKNLTQQETCTNALSRSNYQKIENNKIMPSM DRFIQILLNFNMTLEEFEFVKRDFTPSPKENILYLYSKIITSSETDILLDVISKCDDY LANQNDIFISDIKASLEGILLAEKEHNFELAREKVAYIWDRLSEADELFWNDILILRN IFFIFENETAQHIVNRLISQLKKYRYLYPTLSIEISLHVNRATYLILDEEYELALHYI ELSIKIAKHNHYYLQFCMAVAKKGIVLYKLDQKQQGKHFMQRALRVAKVLEEERILNG IKNEIDYFLHDELQDLSLNEFTKIDI" misc_feature 2518971..>2519153 /locus_tag="lmo2447" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" misc_feature <2519331..2519789 /locus_tag="lmo2447" /note="transcriptional activator, Rgg/GadR/MutR family, C-terminal domain; Region: RGG_Cterm; TIGR01716" /db_xref="CDD:273772" regulatory complement(2519874..2519932) /regulatory_class="terminator" gene complement(2519935..2520399) /gene="smpB" /locus_tag="lmo2448" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987391" CDS complement(2519935..2520399) /gene="smpB" /locus_tag="lmo2448" /experiment="EXISTENCE:[PMID:19448609]" /note="binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation" /codon_start=1 /transl_table=11 /product="SsrA-binding protein" /protein_id="NP_465971.1" /db_xref="GeneID:987391" /translation="MPKGDGKLVAQNKKARHDYAIEETFEAGIVLQGTEIKSVRNARV NLKDSYARIDKGEIFLHNMHISPYEQGNRYNHDPLRTRKLLLHKKQISRLIGETKESG YSIVPLKMYIKDGYAKVLIGVARGKKKYDKRQDLKQKEAKRDIERAFKERQQ" misc_feature complement(2519944..2520399) /gene="smpB" /locus_tag="lmo2448" /note="tmRNA-binding protein [Posttranslational modification, protein turnover, chaperones]; Region: SmpB; COG0691" /db_xref="CDD:440455" regulatory complement(2520407..2520412) /regulatory_class="ribosome_binding_site" gene complement(2520415..2522796) /locus_tag="lmo2449" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987390" CDS complement(2520415..2522796) /locus_tag="lmo2449" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="exoribonuclease RNase-R" /protein_id="NP_465972.1" /db_xref="GeneID:987390" /translation="MEQKQMEEKIMNLLTSAPDKTFALEDLEIEIALNNADNFKLMVK ALVKLEDSGTIVRSRKNRYALPEKMDLVKGTFRAHERGFGFVLPEEKEMDDIFIPPNE VKDAMNGDLVFATITKRKGDNLAEGTIKKIVERKTTQIVGTYMEDLAGTPIVMPDDKR LFGEVEIDLEDGLKPVDGHKVIVELTEYATGHARARGVVKSIIGHRNDPGVDILSIIH KHGISIGFPEEVMEQVSKAPDLVDDSDIGNRRDLRDQMIITIDGADAKDLDDAVTVKQ LPNGNWKLGVHIADVTHYVTEGSPLDIEAQERGTSVYLVDRVIPMLPHKLSNGICSLN PQVDRFTMSCEMEIDQEGHVVNHEIFESIIKTTERMTYTDVNDILVEKDEALREKYAP IVPMLEAMQNLAEILRRKREKRGAIDFDFKEARVVVDEDGHPEAVVMRERSAGEHLIE EFMLAANETVAEHFHWMDVPFIYRIHEDPKEDKLARFFEFITNFGLIVKGTANDIHPA ALQQVLEEVKGKPEEMVVSTVMLRSMQQAKYDTVSAGHFGLSTDFYTHFTSPIRRYPD LIVHRLIREYLINGDVRPETLEKRAEELPEIAEHSSKMERRAVEAERETDELKKTEFM VDKVGERFIGIISSVTNFGLFIELPTTIEGLVHVSAMKGDYFKFHQNQLAMIGERTGQ IYRIGDEVEVEVTKVDVDAREIDFALRSEGKPGPVSDKQKRQREKPIDKTRNFKSSSK NNRNKRRTGKSEDVKPKTERKDDEWYTKPKKKKKKKPFYQGVAKESPKKKKRR" misc_feature complement(2520649..2522787) /locus_tag="lmo2449" /note="Exoribonuclease R [Transcription]; Region: VacB; COG0557" /db_xref="CDD:440323" regulatory complement(2522804..2522809) /regulatory_class="ribosome_binding_site" gene complement(2522830..2523576) /locus_tag="lmo2450" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987389" CDS complement(2522830..2523576) /locus_tag="lmo2450" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carboxylesterase" /protein_id="NP_465973.1" /db_xref="GeneID:987389" /translation="MKITPPQPFLFEKGKRAVLLLHGFTGSSADVRILGRFLQENNYT CYAPQYRGHGVSPDLLLKTGPNDWWEDVLEAYDHLKSLGYTEIAVAGLSLGGLFSLKL GFSRPLKGIIAMSTPTRMDSSSPIIQGFLDYVRNYKKLEGKTTEQIDAEMVAYKDAPM NTIAKLKDEISGVVAEIDMIYAPIMVVQGEKDDMVDVSGAQLIYDTVESTKKELHWFK ESGHVITLDKERKEVNQAILTFLDSLDWQE" misc_feature complement(2522839..2523576) /locus_tag="lmo2450" /note="Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism]; Region: YvaK; COG1647" /db_xref="CDD:441253" regulatory complement(2523587..2523592) /regulatory_class="ribosome_binding_site" regulatory complement(2523789..2523823) /regulatory_class="terminator" gene complement(2523835..2524068) /gene="secG" /locus_tag="lmo2451" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987386" CDS complement(2523835..2524068) /gene="secG" /locus_tag="lmo2451" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecG" /protein_id="NP_465974.1" /db_xref="GeneID:987386" /translation="MSTVLTVLLIIVSVLLITVIILQPGKSAGLSGAISGGAEQLFGK QKARGLELILHRTTIVLSVVFFAILIALAYFVQ" misc_feature complement(<2523844..2524068) /gene="secG" /locus_tag="lmo2451" /note="Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport]; Region: SecG; COG1314" /db_xref="CDD:440925" regulatory complement(2524077..2524082) /regulatory_class="ribosome_binding_site" gene complement(2524168..2524911) /locus_tag="lmo2452" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987385" CDS complement(2524168..2524911) /locus_tag="lmo2452" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carboxylesterase" /protein_id="NP_465975.1" /db_xref="GeneID:987385" /translation="MSADRSFTLKAGNRAVLLLHGFAGTTEDVRELGEILAENGYTVH APNFRGHGDEPAIFLKTTPEMWYEDAVAGYRQLEKDGYNEIAIVGVAMGGVFALKMAE SFSPKAIVPLCANVNRKMRYIPIENYLTKQLKKQGIVEQEADQMLKNYLPEIDVMTEA RATFYKNVARDIEKIHVPTMIGQGCQDEEIDADNANYIFKHIHTNDKQLCFYAGSGHD IVNDCEKDILEEDLIYFLDDLVWLEEKVV" misc_feature complement(2524189..2524911) /locus_tag="lmo2452" /note="Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism]; Region: YvaK; COG1647" /db_xref="CDD:441253" regulatory complement(2524923..2524928) /regulatory_class="ribosome_binding_site" gene complement(2525094..2525813) /locus_tag="lmo2453" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987384" CDS complement(2525094..2525813) /locus_tag="lmo2453" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="epoxide hydrolase" /protein_id="NP_465976.1" /db_xref="GeneID:987384" /translation="MIAEINGINLFYQIIGKGEPILLIHGNGQNHRSLKRMIDDLSTN HQVIAVDSRAHGKSEAGNTPLDFEVMALDMLSLLDYLKIDKYKVIGYSDGGIVALVMG KMQPNRQIASVVIGTNYHVNQIRFLPDLFCRVAYGAAFLLAPFSRFFERMKRQLALTI YHPHMSEADLQKISAPLLAVVGEYDLISSKDTRKMVHSVQHGEMVIVRNGLHYLPRQK PKQLLQLIHSFFSNLSAEIHK" misc_feature complement(2525115..2525813) /locus_tag="lmo2453" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" regulatory complement(2525822..2525827) /regulatory_class="ribosome_binding_site" gene complement(2525946..2526119) /locus_tag="lmo2454" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987383" CDS complement(2525946..2526119) /locus_tag="lmo2454" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2454" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465977.1" /db_xref="GeneID:987383" /translation="MLMKVKNSQASKVLETPKIKDAVVHEKSHPLAEKHSVQKKIINA DMPQQQFHRRLMK" regulatory complement(2526128..2526133) /regulatory_class="ribosome_binding_site" regulatory complement(2526161..2526199) /regulatory_class="terminator" gene complement(2526222..2527514) /gene="eno" /locus_tag="lmo2455" /db_xref="GeneID:987382" CDS complement(2526222..2527514) /gene="eno" /locus_tag="lmo2455" /experiment="EXISTENCE:[PMID:19448609]" /note="enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis" /codon_start=1 /transl_table=11 /product="phosphopyruvate hydratase" /protein_id="NP_465978.1" /db_xref="GeneID:987382" /translation="MSIITEVYAREVLDSRGNPTVEVEVYTEAGAFGRALVPSGASTG EYEAVELRDGDKARYLGKGVLKAVENVNDIIADKIIGFDVTDQIGIDKAMIELDGTPN KGKLGANAILGVSLAAARAAADELGVHLYEYLGGVNGKVLPVPMMNILNGGEHADNNV DVQEFMVMPVGAPNFKEALRMGAEILHALKAVLKGKGLNTGVGDEGGFAPNLKSNEEA LETIMQAIKDAGYKPGEEVKLAMDAASSEFYNRETGKYELKGEGVTRTSEEMVTWYEE MITKYPIISIEDGLDENDWDGFKLLTERIGDRVQLVGDDLFVTNTTKLKEGIEKGIAN SILIKVNQIGTLTETLDAIEMAKRAGYTAVISHRSGETEDSTIADIAVATNAGQIKTG APTRTDRVAKYNQLLRIEDNLADLAEYHGNDTFYNLKK" misc_feature complement(2526231..2527514) /gene="eno" /locus_tag="lmo2455" /note="Enolase [Carbohydrate transport and metabolism]; Region: Eno; COG0148" /db_xref="CDD:439918" regulatory complement(2527524..2527529) /regulatory_class="ribosome_binding_site" gene complement(2527650..2529182) /gene="pgm" /locus_tag="lmo2456" /db_xref="GeneID:987381" CDS complement(2527650..2529182) /gene="pgm" /locus_tag="lmo2456" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate" /codon_start=1 /transl_table=11 /product="phosphoglyceromutase" /protein_id="NP_465979.1" /db_xref="GeneID:987381" /translation="MSKSPVAIIILDGFGKRAETVGNAVAQANKPNFDRYWADFPHGE LKAAGLDVGLPEGQMGNSEVGHTNIGAGRIVYQSLTRIDKAIEEGEFQENKALNNAFT HTKENNSDLHLFGLLSDGGVHSHINHLVALLETAKDKGVKNVYIHAFLDGRDVAPQSS LEYLETLQKAISDLNYGAIATVSGRFYAMDRDKRWERVEKAYKAIVSAEGEKFEDPIE LVKASYANDKNDEFVVPAIITKDGKPVATVKDNDAVIFFNFRPDRAIQLSNAFTDKEW DHFDRGADHPKNIKFVTMTLYNPSIDAEVAFEPIEMKNVIGEVLSNEGLSQLRIAETE KYPHVTFFMNGGRNEEFPGENRILINSPKVETYDLQPEMSAYEVTDALVEDIKNDKHD AIILNFANPDMVGHSGMLEPTIKAIEAVDENLGRVVDLILEKGGSAIIFADHGNSETM STPEGKPHTAHTTVPVPVIVTKKGVTLREGGRLADVAPTMLDLLGVKKPAEMTGESLI QK" misc_feature complement(2527653..2529179) /gene="pgm" /locus_tag="lmo2456" /note="Phosphoglycerate mutase (BPG-independent), AlkP superfamily [Carbohydrate transport and metabolism]; Region: GpmI; COG0696" /db_xref="CDD:440460" gene complement(2529184..2529939) /gene="tpiA" /locus_tag="lmo2457" /db_xref="GeneID:987380" CDS complement(2529184..2529939) /gene="tpiA" /locus_tag="lmo2457" /experiment="EXISTENCE:[PMID:19448609]" /note="Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate" /codon_start=1 /transl_table=11 /product="triosephosphate isomerase" /protein_id="NP_465980.1" /db_xref="GeneID:987380" /translation="MRKPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPA LFLQELVRLTEGTDLRVSAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYF HETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVI KSVIAYEPIWAIGTGKSSTSADANETCAVIRAEVADAVSQKAADAVRIQYGGSVKPEN IADYLAESDIDGALVGGASLEPASFLALLEAVK" misc_feature complement(2529193..2529939) /gene="tpiA" /locus_tag="lmo2457" /note="Triosephosphate isomerase [Carbohydrate transport and metabolism]; Region: TpiA; COG0149" /db_xref="CDD:439919" regulatory complement(2529192..2529197) /regulatory_class="ribosome_binding_site" /gene="tpiA" /locus_tag="lmo2457" regulatory complement(2529949..2529954) /regulatory_class="ribosome_binding_site" gene complement(2529985..2531175) /gene="pgk" /locus_tag="lmo2458" /db_xref="GeneID:987378" CDS complement(2529985..2531175) /gene="pgk" /locus_tag="lmo2458" /EC_number="2.7.2.3" /experiment="EXISTENCE:[PMID:19448609]" /note="Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway" /codon_start=1 /transl_table=11 /product="phosphoglycerate kinase" /protein_id="NP_465981.1" /db_xref="GeneID:987378" /translation="MAKKVVTDLDLKDKKVLVRVDFNVPMKDGKITNDNRIVAALPTI EYILEQNGKAILFSHLGKVKTEEDKEGKSLRPVAVRLSELLGKEVKFVPTTRGPELEK AIDELKDGEVLLFENTRFEDIDGKKESKNDPELGKYWASLGDVFVNDAFGTAHRAHAS NVGIASNLESAAGFLMEKEIKFIGGVVDNPARPLVAILGGAKVSDKIGVIENLLTKAD KVLVGGGMTFTFMAAQGQEIGKSLLEADKVELAKGLLEKAGDKLVLPVDAVVSKEFSN DAPFHTVSADSIPADEMGLDIGQATIDLFTKELQGAKTVVWNGPMGVFELSNFAKGTI GVCEAIANLTDATTIIGGGDSAAAAMDLGFADKFTHISTGGGASLEYLEGKELPGVAS ISDK" misc_feature complement(2529988..2531160) /gene="pgk" /locus_tag="lmo2458" /note="3-phosphoglycerate kinase [Carbohydrate transport and metabolism]; Region: Pgk; COG0126" /db_xref="CDD:439896" regulatory complement(2531184..2531189) /regulatory_class="ribosome_binding_site" regulatory complement(2531228..2531261) /regulatory_class="terminator" gene complement(2531310..2532320) /gene="gap" /locus_tag="lmo2459" /db_xref="GeneID:987377" CDS complement(2531310..2532320) /gene="gap" /locus_tag="lmo2459" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase" /protein_id="NP_465982.1" /db_xref="GeneID:987377" /translation="MTVKVGINGFGRIGRLAFRRIQNVEGIEVVAINDLTDAKMLAHL LKYDTTQGRFDGEVEVHDGFFKVNGKEVKVLANRNPEELPWGDLGVDIVLECTGFFTA QDKAELHIKAGAKKVVISAPATGDMKTIVYNVNHETLDGTETVISGASCTTNCLAPMA KVLEDKFGVVEGLMTTIHAYTGDQNTLDAPHPKGDFRRARAAAENIIPNTTGAAKAIG EVLPTLKGKLDGAAQRVPVPTGSLTELVTVLDKKVTVDEVNAAMEAASDPETFGYTSD QVVSSDIKGMTFGSLFDETQTKVLTVGDQQLVKTVAWYDNEMSYTAQLVRTLEYFAKI AK" misc_feature complement(2531322..2532320) /gene="gap" /locus_tag="lmo2459" /note="Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]; Region: GapA; COG0057" /db_xref="CDD:439827" regulatory complement(2532331..2532336) /regulatory_class="ribosome_binding_site" gene complement(2532352..2533398) /locus_tag="lmo2460" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987376" CDS complement(2532352..2533398) /locus_tag="lmo2460" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_465983.1" /db_xref="GeneID:987376" /translation="MSDLINIQKKLLPDVLMIMQKRYQILRSIYFSEPVGRRTLAGML GMSERVLRGEVEFLKAQGLVEIASSGMTVTKEGLVVFRDLESVMNQLSGLHSMEEQLA KKLQIKKCLVVQGDSDDTPWVREEMGRVAVEQLDMALTEKRNIVAVMGGSTMATVAEM MTTDFAKGRELLFVPGRGGIGEDLDNQANTICDKMATKTNTKHRVLYVPEQLGEEAYR SLLKEPAIQEGLRLVQSANAIILGIGDALAMAKRRHTGEDVLEKIIHRKAVGEAFGYY FDEQGEVVHKVPTFGLQFEDLAQIPHIIAVAGGTSKAKAIKSYMKSAPKNTILITDEG AAKSLLKGSNTLLK" misc_feature complement(2532376..2533326) /locus_tag="lmo2460" /note="DNA-binding transcriptional regulator LsrR, DeoR family [Transcription]; Region: DeoR; COG2390" /db_xref="CDD:441955" regulatory complement(2533407..2533412) /regulatory_class="ribosome_binding_site" regulatory complement(2533784..2533837) /regulatory_class="terminator" gene complement(2533840..2535183) /gene="sigL" /locus_tag="lmo2461" /db_xref="GeneID:987375" CDS complement(2533840..2535183) /gene="sigL" /locus_tag="lmo2461" /EC_number="2.7.7.6" /experiment="EXISTENCE:[PMID:19448609]" /note="sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen" /codon_start=1 /transl_table=11 /product="RNA polymerase factor sigma-54" /protein_id="NP_465984.1" /db_xref="GeneID:987375" /translation="MRLESNFVQKQQQKQSQKLNMTQQLSQSIAMLQFATADLVAFLE DKALENPLIEVIPGSDFATDFSYSSRKSAGSSDDTDWLEQIADNKMTLADALKEQLHL MDVTQTQKIIVLYLIESLNDNGYLQIDLKDVSAALLMDDSSVLEGLEILQSMEPAGVG ARDARECILLQIERSPDAPYIAYDVIQKFFTEFAEKKWKKIASEMDVSLQDIQEVSDY IQTLNPKPGSEFESERVQYVVPDLILLQHEDEFAVSLAKQFLPQVRFQEAYYETMRAT EEKDVAQFLREKAGEFDWIKKGIEQRESTLQRVGEAIVSHQKAYFLDNSAHLQPLTLK EVAEELGVHESTVSRAVNGKYMETTNGVYELKRFFASGLQKKSSENENIGDISSTTIK KLVQEFVAAEDKLKPLSDQKIVDMLAEKEIQVSRRAIAKYRLELNIPSSSKRKRF" misc_feature complement(2533849..2535129) /gene="sigL" /locus_tag="lmo2461" /note="RNA polymerase sigma-54 factor; Region: rpoN_sigma; TIGR02395" /db_xref="CDD:274109" regulatory complement(2535191..2535196) /regulatory_class="ribosome_binding_site" regulatory complement(2535297..2535335) /regulatory_class="terminator" gene complement(2535342..2536268) /locus_tag="lmo2462" /db_xref="GeneID:987372" CDS complement(2535342..2536268) /locus_tag="lmo2462" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dipeptidase" /protein_id="NP_465985.1" /db_xref="GeneID:987372" /translation="MRVIDTHCDALYKLQAGKGKYTFQDAEELDVNFERLIEAKMLLQ GFAIFLDEDIPVEHKWKKAVEQVNIFKQHVLHKGGIIHHVKKWCDLENLPEDKIGAML TLEGIEPIGRDLDKLTQLLDGGVLSVGLTWNNANLAADGIMEERGAGLTRFGKDIIHL LNERKVFTDVSHLSVKAFWETLEQAEFVIASHSSAKAICAHPRNLDDEQIKAMIEHDA MIHVIFHPLFTTNDGVADIEDVIRHIDHICELGGMKNIGFGSDFDGIPDHVKGLEHAG KYQNFLETLGKHYTKEEVEGFASRNFLNHLPK" misc_feature complement(2535345..2536262) /locus_tag="lmo2462" /note="Membrane dipeptidase (Peptidase family M19); Region: Peptidase_M19; pfam01244" /db_xref="CDD:395996" misc_feature complement(order(2535477..2535479,2535486..2535488, 2535660..2535662,2535693..2535695,2535753..2535755, 2535954..2535956,2536122..2536124,2536242..2536244, 2536248..2536250)) /locus_tag="lmo2462" /note="active site" /db_xref="CDD:238626" misc_feature complement(order(2535900..2535905,2535912..2535917, 2535921..2535926,2536053..2536055,2536065..2536067, 2536074..2536079,2536083..2536091,2536116..2536118)) /locus_tag="lmo2462" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238626" regulatory complement(2536280..2536285) /regulatory_class="ribosome_binding_site" gene complement(2536347..2538581) /locus_tag="lmo2463" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987371" CDS complement(2536347..2538581) /locus_tag="lmo2463" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="multidrug transporter" /protein_id="NP_465986.1" /db_xref="GeneID:987371" /translation="MLLFLTFHLSNDKRKNKQTKGGFIMKDGFLSKIASGVGGKKGRF ITLGIWIIAIIILQFFFPKAADYKDDAAKDLPNSEPSVVAQKLIDDKFAGTDGVPALI TWYRSTGLTNEDLVNIQKYSKELTENPVDYQKMAVPYDKMPPVALKQQVSKDGTTFIQ TVIMKDSATSDQLTESFKQLESAAKTTIGEDPFAQKVSADDTLVARTTGPAGISVDAS GLFKDADVSLLIGTVLLVLVFLLVIYRSPILALIPLIAVGFAYLVITPILGLLAKEGI ITYGSQGLSIMTVLLFGAGTDYCLFLISRFRSHLHTEKNRFQAFKEAFSGTAGAIALS GLTVMAALLLLLAAEYGSFHNFAVPFSLAIFIMMISSLTLVPALLGIFGRVSFWPFVP RTVEMEETRAKKKGKTPKHHKENRFWHKIGEMSAKHPVRILIITLIILIGCGIFTTQV KYTYDTLSTFPEDMPSREGFTLISDHFGAGMLAPMEVVVNSKESMKSSLENVNGVASV TGPERSKGYQKYTLILKDNPYSNEAMDVVPKVRAAADKGNDVYIAGQTATQYDDRAVT EHDEKVIIPLVIALIAILLLCYLRSITAMLYLVATVLLSFVGALGLGWVIIHYAMGVE AISGLIPLYAFVFIVALGEDYNIFMISSIWKNSKKMPLRKAITEGVGQTGGVITSAGL ILAGTFGVLTTLPIQLLVQFGLITAIGVLLDTFIVRPFLVPSITVLLGKWAFWPGKQH KMTK" misc_feature complement(2536368..2538407) /locus_tag="lmo2463" /note="Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only]; Region: YdfJ; COG2409" /db_xref="CDD:441964" gene complement(2538588..2539196) /locus_tag="lmo2464" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987370" CDS complement(2538588..2539196) /locus_tag="lmo2464" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_465987.1" /db_xref="GeneID:987370" /translation="MEKKRTRAEELGITRRKILDTARDLFMEKGYRAVSTREIAKIAN ITQPALYHHFEDKESLYIEVVRELTQNIQVEMHPIMQTNKAKEEQLHDMLIMLIEEHP TNILLMIHDILNEMKPENQFLLYKLWQKTYLEPFQQFFERLENAGELRNGISAETAAR YCLSTISPLFSGKGSFAQKQTTTEQIDELINLMMFGICKKEV" misc_feature complement(2538699..2539157) /locus_tag="lmo2464" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" regulatory complement(2538593..2538598) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2464" regulatory complement(2539204..2539209) /regulatory_class="ribosome_binding_site" gene complement(2539213..2539611) /locus_tag="lmo2465" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987367" CDS complement(2539213..2539611) /locus_tag="lmo2465" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2465" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465988.1" /db_xref="GeneID:987367" /translation="MAASLKDRLEEEVKTYSADNNLTVQTIDFLYAGPHMRGRHSLVL AFTEAGIFTFVFKLSDAEMHFLDGKTVQQIVLEKKKLVYRLYIRAVTEEGELEEGKYL VSKRVLGRKWHKETLEKLINKNLPLLTATK" regulatory complement(2539620..2539625) /regulatory_class="ribosome_binding_site" gene 2539838..2540173 /locus_tag="lmo2466" /db_xref="GeneID:987366" CDS 2539838..2540173 /locus_tag="lmo2466" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2466" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465989.1" /db_xref="GeneID:987366" /translation="MGEQNYIETRNGRTSFFDGGLLQYIGWTILGTLVTLCTFGICYP WALCMVYGWKINHTVIEGRRLKFQGSAVGLFGHWIKWLLLTIITIGIYGFWVFIKLED WKVKNTIFN" misc_feature <2539865..>2540146 /locus_tag="lmo2466" /note="Bacterial protein of unknown function (DUF898); Region: DUF898; cl01738" /db_xref="CDD:470320" regulatory 2540184..2540229 /regulatory_class="terminator" gene complement(2540230..2540301) /locus_tag="lmot62" /db_xref="GeneID:3167604" tRNA complement(2540230..2540301) /locus_tag="lmot62" /product="tRNA-Arg" /db_xref="GeneID:3167604" gene complement(2540421..2541857) /locus_tag="lmo2467" /db_xref="GeneID:987365" CDS complement(2540421..2541857) /locus_tag="lmo2467" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="chitin-binding protein" /protein_id="NP_465990.1" /db_xref="GeneID:987365" /translation="MKKMTKIGMFFAVFTLAVVLFQTTASAHGYISKPASRVYLANKG INVGVGSAQYEPQSVEAPKGFPISGPADGSIAGGGKYSLLDEQSASRWAKVDIESGPL TVEWTLTAPHKTSSWQYFITKKGWDPNKPLTRSSLEPLATIEADGSVPNALAKQEINI PNDRSGYYLILGVWNIADTGNAFYQVIDANIINSDITPVADTEAPTKPTNLAATTTTK TVSLAWNASTDNVGIKGYEILRDGVVIGESQTASYEDTTVESNTAYTYTVRAKDFAGN KSTLSNSINVTTKEVPAVDNEAPTAPKSLMSHGQTDTTIALCWQASTDNVEVKNYEIY RNNTKIATSTKTMFEDTKLASNTSYNYKVYAVDTSGNRSLVSNEITIKTKTLDPLNTW KSDQIYNAGDQVYYNGVAYTAKWWTKGNTPDTSDVWQTASTDIQTWNVQKAYNGGDKV TYNGKTYQAKWWVRGEKPDSSSIWTLLN" misc_feature complement(2541054..2541857) /locus_tag="lmo2467" /note="Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains [General function prediction only]; Region: COG3397" /db_xref="CDD:442624" misc_feature complement(2540460..>2541278) /locus_tag="lmo2467" /note="Fibronectin type 3 domain [General function prediction only]; Region: FN3; COG3401" /db_xref="CDD:442628" regulatory complement(2541865..2541870) /regulatory_class="ribosome_binding_site" regulatory 2541999..2542004 /regulatory_class="ribosome_binding_site" gene 2542014..2542610 /gene="clpP" /locus_tag="lmo2468" /db_xref="GeneID:987364" CDS 2542014..2542610 /gene="clpP" /locus_tag="lmo2468" /EC_number="3.4.21.92" /experiment="EXISTENCE:[PMID:19448609]" /note="hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease proteolytic subunit" /protein_id="NP_465991.1" /db_xref="GeneID:987364" /translation="MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSI VSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSF LLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQ PYEVIARDTDRDNFMTAQEAKDYGLIDDIIINKSGLKG" misc_feature 2542014..2542595 /gene="clpP" /locus_tag="lmo2468" /note="ATP-dependent Clp protease proteolytic subunit; Reviewed; Region: clpP; PRK00277" /db_xref="CDD:178955" misc_feature order(2542104..2542106,2542110..2542112,2542137..2542142, 2542149..2542154,2542161..2542163,2542206..2542208, 2542227..2542229,2542239..2542241,2542248..2542250, 2542257..2542262,2542272..2542274,2542296..2542298, 2542362..2542364,2542368..2542370,2542386..2542397, 2542437..2542439,2542446..2542448,2542452..2542454, 2542458..2542460,2542527..2542529,2542533..2542535) /gene="clpP" /locus_tag="lmo2468" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:132928" misc_feature order(2542305..2542307,2542380..2542382,2542527..2542529) /gene="clpP" /locus_tag="lmo2468" /note="active site residues [active]" /db_xref="CDD:132928" regulatory complement(2542608..2542645) /regulatory_class="terminator" regulatory 2542619..2542656 /regulatory_class="terminator" gene complement(2542658..2544049) /locus_tag="lmo2469" /db_xref="GeneID:987361" CDS complement(2542658..2544049) /locus_tag="lmo2469" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino acid transporter" /protein_id="NP_465992.1" /db_xref="GeneID:987361" /translation="MTKVNSFFRKKSFHNPATDKHHLNKSLGAFDLTMLGVGAVVGGG IFILPGQVASVIAGPGIIISFIIAGIACCLAALCYSEFASKLPVAGSAYTYSYHVFGE GVAWILGWSLILEYGLAVAAIASGWSSYMKSLLAGFDLHIPTAISSAYDPSAGTYFDL LAFVVVMVIGILLSFGIRESTRVNNIMVLVKIAVVVLFILVGAFYVKPDNWTPFLPFG VQGVITGASTVFFAYIGFDAVSSAAEEVKNPQKNMPIGIISSLAVCTLLYILLSAVLT GVVPYTDLVDVSAPVAFALQAINQNWIAGLLSVGAIVGMTTVVLVMSYGGTRLLFAMG RDGLLPKSFSKISKNDTPVRNTMIFATVMGLIASTVPMADLAQLINIGTLFAFAMVSI GIFFLRRNPDLNQKGFKTPFYPVVPALSFLLCVYLMINLSKTTWIAFGIWFVIGILVY TFYGRKHSALRIK" misc_feature complement(2542691..2543983) /locus_tag="lmo2469" /note="amino acid transporter; Region: 2A0306; TIGR00909" /db_xref="CDD:129987" regulatory complement(2544057..2544062) /regulatory_class="ribosome_binding_site" regulatory 2544254..2544259 /regulatory_class="ribosome_binding_site" gene 2544267..2545433 /locus_tag="lmo2470" /db_xref="GeneID:987359" CDS 2544267..2545433 /locus_tag="lmo2470" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_465993.1" /db_xref="GeneID:987359" /translation="MRKVLMFLSTALLLAILSLSFTGLDLKAKAASDLYPLPAPIIDV FPDDGLAKDMAKNLNKDSVNDVIDQDDLDALTGLGFETSTITNDSMQLLERAMFNNVT DVSIMEFGAKLTEFPDITTIPHLKTLFFADPPGRLTRNLSLPNYQNYPEMDTITMSGN NLIGSIPDFTGMPALKQLYMSEMLITSDELPNFNNIPLLITLDLSSNQLTTIPDFQNI PNLTFLDLNANLLTNTPDFQNLPKLTDLNLRHNNLTGTMVNYTNLPSLESLNLDYNFL TELPSNVLDTIYVQSQNGELPDQTINQGDTCTIDLPIYFQMEETNMLVSPEVTGEYIG ISVIQLPTTVNEEGNTITVDTSALSPGEYKLDVSYNHNYATGGVCSYDWNVTIN" misc_feature 2544270..2544431 /locus_tag="lmo2470" /note="Bacterial adhesion/invasion protein N terminal; Region: Internalin_N; pfam12354" /db_xref="CDD:289150" misc_feature <2544741..>2545109 /locus_tag="lmo2470" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 2544789..2544860 /locus_tag="lmo2470" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2544861..2544926 /locus_tag="lmo2470" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2544927..2544992 /locus_tag="lmo2470" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2544993..2545061 /locus_tag="lmo2470" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2545062..2545121 /locus_tag="lmo2470" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" regulatory complement(2545437..2545478) /regulatory_class="terminator" regulatory 2545448..2545489 /regulatory_class="terminator" gene complement(2545487..2546503) /locus_tag="lmo2471" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987354" CDS complement(2545487..2546503) /locus_tag="lmo2471" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the reduction of alpha, beta-unsaturated aldehydes and ketones; reduces the nitro group nitroester and nitroaromatic compounds" /codon_start=1 /transl_table=11 /product="NADPH dehydrogenase" /protein_id="NP_465994.1" /db_xref="GeneID:987354" /translation="MSKLFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHY VSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVGGLHYHGAKAGIQL AHAGRKAVLPGEIVAPSAIAFDEKSDKPVELTKEAIKEVVADFKRAAYRAKEAGFDVI EIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAVKEVWDGPIIVRVSAT DYAHGGLQLEDHIPFAKWMKADGVELIDVSTGGLVNVAPPVFPGYQVPFADEIRRGAG IATGALGLITRGEQAEEILCNERADLIIVGRELLRNPYFAKDAAKQLGETIEAPKQYS RAWK" misc_feature complement(2545490..2546500) /locus_tag="lmo2471" /note="NADPH dehydrogenase NamA; Provisional; Region: PRK13523" /db_xref="CDD:184110" misc_feature complement(order(2545571..2545573,2545580..2545588, 2545592..2545594,2545652..2545657,2545712..2545714, 2545760..2545762,2545862..2545864,2546000..2546002, 2546006..2546008,2546015..2546017,2546201..2546203, 2546327..2546329,2546423..2546425,2546429..2546431, 2546435..2546440)) /locus_tag="lmo2471" /note="active site" /db_xref="CDD:239242" misc_feature complement(order(2545571..2545573,2545580..2545588, 2545592..2545594,2545652..2545657,2545712..2545714, 2545760..2545762,2545862..2545864,2546006..2546008, 2546015..2546017,2546201..2546203,2546327..2546329, 2546429..2546431,2546435..2546440)) /locus_tag="lmo2471" /note="FMN binding site [chemical binding]; other site" /db_xref="CDD:239242" misc_feature complement(order(2546000..2546002,2546006..2546008, 2546015..2546017,2546423..2546425,2546429..2546431)) /locus_tag="lmo2471" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:239242" misc_feature complement(order(2545562..2545567,2545634..2545636, 2545652..2545654,2545709..2545711,2545715..2545717, 2546357..2546359,2546369..2546371,2546378..2546383, 2546387..2546392,2546426..2546428)) /locus_tag="lmo2471" /note="homotetramer interface [polypeptide binding]; other site" /db_xref="CDD:239242" misc_feature complement(2546000..2546002) /locus_tag="lmo2471" /note="catalytic residue [active]" /db_xref="CDD:239242" regulatory complement(2546513..2546518) /regulatory_class="ribosome_binding_site" gene complement(2546530..2547501) /locus_tag="lmo2472" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987353" CDS complement(2546530..2547501) /locus_tag="lmo2472" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465995.1" /db_xref="GeneID:987353" /translation="MSFASETKKELTHMDVSDSDAKVELAAFIRMNGAISFSSQLVIM DVQTENAAIARRMYQLLKDLYEVPIELLVRRKMKLKKNNVYIVRLKSGTRGILEDLRI LEPPMTFTKSIDRGFVKKRSAKRAYLRGAFLASGSVNNPETSSYHLEIFSVYEEHNEA ICALMNQFDLNARTLERKNGFITYLKEAEKITEFLSIIGATSALLHFEDVRIMRDMRN SVNRLVNCETANLNKTINAAVRQIDNIKYIQSTVGLEALPERLREIAALRIANEDVTL KELGEMLTTGQVSKSGINHRLRKLDQIAERLRSGETPAQVGLKISNS" misc_feature complement(2546575..2547501) /locus_tag="lmo2472" /note="DNA-binding transcriptional regulator WhiA, involved in cell division [Transcription]; Region: WhiA; COG1481" /db_xref="CDD:441090" gene complement(2547509..2548477) /locus_tag="lmo2473" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987352" CDS complement(2547509..2548477) /locus_tag="lmo2473" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465996.1" /db_xref="GeneID:987352" /translation="MKKETKPRVVVIGGGTGLPVILKGLKKKDIHLTAIVTVADDGGS SGKIREQMDVLPPGDIRNVMLALSNVDPRVVDLFQYRFAVDGDLSGHVIGNLILTALS QLNDSYVDAINVLATVLKIRGKVIPATDQPLILNAEMEDGSIVHGESLIPLQGKHINR VYIEPENVKPYPTAVEAVKEADLIVIGPGSLYTSILPNLLLTELADEITASKAPKVYI TNILTQIGETDFFSDADHIKVIHEHVGKSFIDKTLINTTTVPKELLFPEDVAQVEHNA KGMEELGVEAIYQDFLSTEDGLVRHAAEKVADALLAMLPNQTNEKE" misc_feature complement(2547533..2548453) /locus_tag="lmo2473" /note="conserved hypothetical protein, cofD-related; Region: CofD_related; TIGR01826" /db_xref="CDD:211689" misc_feature complement(order(2547806..2547811,2547896..2547898, 2547908..2547913,2548430..2548438)) /locus_tag="lmo2473" /note="phosphate binding site [ion binding]; other site" /db_xref="CDD:132873" misc_feature complement(order(2548193..2548195,2548295..2548297, 2548304..2548306,2548346..2548348,2548358..2548360)) /locus_tag="lmo2473" /note="putative substrate binding pocket [chemical binding]; other site" /db_xref="CDD:132873" misc_feature complement(order(2548124..2548129,2548136..2548138, 2548166..2548171,2548175..2548180,2548187..2548192, 2548199..2548201,2548214..2548216)) /locus_tag="lmo2473" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:132873" regulatory complement(2547511..2547516) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2473" gene complement(2548479..2549354) /locus_tag="lmo2474" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987349" CDS complement(2548479..2549354) /locus_tag="lmo2474" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_465997.1" /db_xref="GeneID:987349" /translation="MASKQLKLVIITGMSGAGKTVAMQSLEDLGYFCVDNLPPSLLPK FWELMKESDKMDKIALVMDLRGREFFDSIEPALDELDNTNFITTKILFLEADDKVLVS RYKETRRHHPLEPNGSVLDGINAERELLSDLKGRSQLVINTSNMAPRELRERINNEFQ TEDKDIFNVQLMSFGFKYGIPIDADLVFDVRFLPNPHYIDKMRPLTGLDEDVYEYVMK WPETQTFLDKLVDLLMFTLPFYKREGKTQLVIAIGCTGGQHRSVALTEFVGKTIQQKY ETTISHRDMKRRKGR" misc_feature complement(2548485..2549354) /locus_tag="lmo2474" /note="RNase adapter RapZ; Region: PRK05416" /db_xref="CDD:235450" regulatory complement(2548486..2548491) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2474" regulatory complement(2549363..2549368) /regulatory_class="ribosome_binding_site" gene complement(2549462..2551192) /locus_tag="lmo2475" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987347" CDS complement(2549462..2551192) /locus_tag="lmo2475" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoglucomutase" /protein_id="NP_465998.1" /db_xref="GeneID:987347" /translation="MNWQEEYQKWVANDKLDSTLRKQLTNMETNEKELEDSFYRNMEF GTAGMRGVLGAGTNRMNIYTIRKASLGLAQFVAENGEEAKKRGIVIAYDPRHMSREFA FESAAVLGHHGVKSYVFDALRPTPELSFAVRHLNAFGGIVITASHNPPEYNGYKIYGE DGGQMPPTGASAVIEYINAVEDIFSVEVANQELLIENGLLEVISEKVDRPYLEKLKEV IVNKELVQERGEDLKIVFTPLHGTGGILGVPALESVGFTNIVKVDEQFVNDPDFGTVK SPNPENREAFLLAIEYGKKFGGDILVGTDPDADRLGVAVRNADGEYEVLSGNQIGAII LHYLLKQKKAQSELPANAAVLKSIVTSNLGTEIAKHYGAEMIEVLTGFKFIAEQIKHF EETGKHTFEFGYEESNGYMVKPFTRDKDAIQAVLAIAEVALVSKVAGRTLLEDLDQIY DEFGYYNEDLVSLTLSGKDGSERIKEITSSFREQLPTSMGGFVVERAEDYLRSETTWI ATGKTEAIHLPTADVIKCYFEDGSWFCLRPSGTEPKIKFYFSIRGESKEESTAKLEKV KADLMQHIEA" misc_feature complement(2549489..2551072) /locus_tag="lmo2475" /note="This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and...; Region: PGM2; cd05799" /db_xref="CDD:100092" misc_feature complement(order(2549555..2549557,2549570..2549578, 2549582..2549584,2549966..2549968,2549972..2549974, 2549978..2549980,2550047..2550055,2550116..2550118, 2550263..2550268,2550272..2550274,2550278..2550280, 2550725..2550727,2550749..2550757,2551043..2551045, 2551052..2551054,2551058..2551060)) /locus_tag="lmo2475" /note="active site" /db_xref="CDD:100092" misc_feature complement(order(2549555..2549557,2549570..2549578, 2549582..2549584,2549966..2549968,2549972..2549974, 2549978..2549980,2550047..2550049,2550053..2550055, 2550116..2550118,2550263..2550265,2550755..2550757, 2551052..2551054)) /locus_tag="lmo2475" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:100092" misc_feature complement(order(2550266..2550268,2550272..2550274, 2550278..2550280,2550755..2550757)) /locus_tag="lmo2475" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:100092" regulatory complement(2551200..2551205) /regulatory_class="ribosome_binding_site" gene complement(2551234..2552295) /locus_tag="lmo2476" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987343" CDS complement(2551234..2552295) /locus_tag="lmo2476" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aldose 1-epimerase" /protein_id="NP_465999.1" /db_xref="GeneID:987343" /translation="MIFIEVMKERFGEFEGETVWKWTMINDHDMRMSVLNYGAIVTSL ETKDKFGDFANISLGFTNLDDYLAHSPYFGATLGPVAGRITNGQFSLDGKQFQLIQNE GSNHRHGGKFNFSKKLWDVSVEKSLDQIVMTFEYCWADGENGYPGKIDAKMTYTLNNK NEWLVDYEARSNQPTIYNPSNHIYFNLSGEAGSTVLQHQLWVNSDSFLPIDEEFLPIG EKRLAENTIFDLRAGREVAEITQSQDQQVKLVGAGLDHTFILKHENGRPDAVLFDPKS GRRLEMETKADSVLIYTANSLDGSFEIDERAVPKYAGITMETQGLVDAINHEGFGDIV LRPEKPFTSRTAFRFTVES" misc_feature complement(2551249..2552235) /locus_tag="lmo2476" /note="galactose mutarotase_like; Region: galactose_mutarotase_like; cd09019" /db_xref="CDD:185696" misc_feature complement(order(2551345..2551347,2551420..2551422, 2551531..2551533,2551744..2551746,2551750..2551752, 2551972..2551974,2552047..2552049,2552080..2552082)) /locus_tag="lmo2476" /note="active site" /db_xref="CDD:185696" misc_feature complement(order(2551345..2551347,2551750..2551752)) /locus_tag="lmo2476" /note="catalytic residues [active]" /db_xref="CDD:185696" regulatory complement(2552299..2552304) /regulatory_class="ribosome_binding_site" gene complement(2552312..2553295) /gene="galE" /locus_tag="lmo2477" /db_xref="GeneID:987341" CDS complement(2552312..2553295) /gene="galE" /locus_tag="lmo2477" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="UDP-glucose 4-epimerase" /protein_id="NP_466000.1" /db_xref="GeneID:987341" /translation="MGIAVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHRESIHKK AKFYEGDIRDKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLE VMEEFDVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYG MKFVALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGT CIRDYVQVEDLIDAHIRALEYLKNGGESNIFNLGSSNGFSVKEMLEAARTVTGKEIPA EVVPRRAGDPGTLIASSDKAREILGWEPTYTDVKDIIATAWKWHVSHPNGY" misc_feature complement(2552315..2553295) /gene="galE" /locus_tag="lmo2477" /note="UDP-glucose 4-epimerase [Cell wall/membrane/envelope biogenesis]; Region: GalE; COG1087" /db_xref="CDD:440704" regulatory complement(2553304..2553309) /regulatory_class="ribosome_binding_site" regulatory complement(2553356..2553395) /regulatory_class="terminator" gene complement(2553414..2554373) /gene="trxB" /locus_tag="lmo2478" /db_xref="GeneID:987338" CDS complement(2553414..2554373) /gene="trxB" /locus_tag="lmo2478" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="thioredoxin reductase" /protein_id="NP_466001.1" /db_xref="GeneID:987338" /translation="MASEEKIYDVIIIGAGPAGMTAALYTSRADLDTLMIERGVPGGQ MVNTAEVENYPGFDSILGPDLSDKMLSGAKQFGAEYAYGDIKEVVDGKEFKTVTAGSK TYKARAIIIATGAEHRKLGAAGEEELSGRGVSYCAVCDGAFFKNRELIVVGGGDSAVE EGTYLTRYADKVTIVHRRDKLRAQQILQDRAFKDEKVDFIWNSTVEEIVGDGKKVTGA KLVSTVDGSESIMPVDGVFIYVGLVPLTKAFLNLGITDDEGYIVTDEEMRTNLPGIFA AGDVRAKSLRQIVTATGDGGLAGQNAQKYVEELKESLEAEAAK" misc_feature complement(2553456..2554349) /gene="trxB" /locus_tag="lmo2478" /note="thioredoxin-disulfide reductase; Region: TRX_reduct; TIGR01292" /db_xref="CDD:273540" regulatory complement(2554383..2554388) /regulatory_class="ribosome_binding_site" gene complement(2554452..2555927) /locus_tag="lmo2479" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987336" CDS complement(2554452..2555927) /locus_tag="lmo2479" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2479" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466002.1" /db_xref="GeneID:987336" /translation="MEKDKKIPAKIYPFYPNGQFYFERGVEAFRDQRIKEAIRYLVRA SELEPGEAVILCQLAICYTEIGQFHKSNQLLREVLEQRNGNMEYCYYFIANNFAYMKD YRRALQYANRYLDSSTDGEYTEEAKDLIEVLLEETPFGETIENGFSKLEQEFYSYKKE INRYLAEEDSASACDILRKVIDEKPNFWPAYNQLASLYFEQLKEEEGVRVLSDLLSRN PGNLLGICDLFIYHFYKGNRKEADELYLELRDVLPVLAHHKEKLGLIHAMMGEYEEAD DLLEQVADLEVTERSKYYYFRAKSSYYLGDVEGAKMFWHSFLECDLYEDVRFPWEQEP DLTNDTRLVLEMLQEEDDLTHMLGVYALTISGNRPELVLFHPLLDMSDWSYMEHLMFT NFDYFPDGAIEQNGYLIAKAMIILKENGILLNEEYMALYKQMFSLVLIDAGKDLILGR YTIETVASAIAKLFLPHLKLQLVEEFECSKCARDIERVLSR" misc_feature complement(2555535..2555879) /locus_tag="lmo2479" /note="Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]; Region: NrfG; COG4235" /db_xref="CDD:443378" misc_feature complement(order(2555631..2555633,2555640..2555645, 2555652..2555657,2555667..2555669,2555736..2555741, 2555745..2555750,2555757..2555762,2555769..2555771, 2555841..2555843,2555847..2555852,2555859..2555864, 2555871..2555873)) /locus_tag="lmo2479" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature complement(2555790..2555873) /locus_tag="lmo2479" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(2555685..2555777) /locus_tag="lmo2479" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(2555583..2555672) /locus_tag="lmo2479" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(order(2555226..2555228,2555235..2555240, 2555247..2555252,2555259..2555261,2555328..2555333, 2555337..2555342,2555349..2555354,2555361..2555363, 2555433..2555435,2555439..2555444,2555451..2555456, 2555463..2555465)) /locus_tag="lmo2479" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature complement(2555382..2555465) /locus_tag="lmo2479" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(<2554965..2555438) /locus_tag="lmo2479" /note="Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis]; Region: LapB; COG2956" /db_xref="CDD:442196" misc_feature complement(2555277..2555369) /locus_tag="lmo2479" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(2555187..2555264) /locus_tag="lmo2479" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(2555073..2555165) /locus_tag="lmo2479" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature complement(2554971..2555057) /locus_tag="lmo2479" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" regulatory complement(2555936..2555941) /regulatory_class="ribosome_binding_site" regulatory complement(2555990..2556028) /regulatory_class="terminator" gene complement(2556013..2556510) /locus_tag="lmo2480" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987334" CDS complement(2556013..2556510) /locus_tag="lmo2480" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_466003.1" /db_xref="GeneID:987334" /translation="MRRLDRFNAPDDTVNTLFQVYKTISFWKVLKNTLVIEFGRFFPW MGGKRKIYRVCLGMEIGEKTAIAYKVMPDLFFPEKILIGENSIIGYHTTILTHEYLLS EYRVGEVVIGRDVMVGANVTILPGTVIGDGAVIAAGAVVSVDVPAGSFAYGNPLIIKE KATLT" misc_feature complement(2556046..2556342) /locus_tag="lmo2480" /note="Acetyltransferase, isoleucine patch superfamily [General function prediction only]; Region: WbbJ; COG0110" /db_xref="CDD:439880" gene complement(2556514..2557167) /locus_tag="lmo2481" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987333" CDS complement(2556514..2557167) /locus_tag="lmo2481" /EC_number="3.6.1.1" /experiment="EXISTENCE:[PMID:19448609]" /note="hydrolyzes pyrophosphate formed during serine-46-phosphorylated HPr dephosphorylation" /codon_start=1 /transl_table=11 /product="pyrophosphatase PpaX" /protein_id="NP_466004.1" /db_xref="GeneID:987333" /translation="MTGKITTLLFDLDGTLINTNELIIKTFQVTLQEFLPDRVFTRED ILPFIGPSLMETFREINPAHADEMRAFYREYNLKHHDDLILEYDGVYEAIRALYEEDY KLGIVSTKMYDTIMRGLKVTGLDKFFQVVIGLDQVSNAKPDPEGIEMALSLLNATKEE AIMIGDNYHDIEAGKNAETLTAGVAWAIKGPEHLAQFQPDFMLEKMSDLLAIVRDEE" misc_feature complement(2556517..2557161) /locus_tag="lmo2481" /note="pyrophosphatase PpaX; Provisional; Region: PRK13288" /db_xref="CDD:237336" regulatory complement(2556519..2556524) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2481" regulatory complement(2557173..2557178) /regulatory_class="ribosome_binding_site" gene complement(2557211..2558044) /gene="lgt" /locus_tag="lmo2482" /db_xref="GeneID:987331" CDS complement(2557211..2558044) /gene="lgt" /locus_tag="lmo2482" /experiment="EXISTENCE:[PMID:19448609]" /note="transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein" /codon_start=1 /transl_table=11 /product="prolipoprotein diacylglyceryl transferase" /protein_id="NP_466005.1" /db_xref="GeneID:987331" /translation="MGNGVQPLDPVAIQIGSISVKWYGVIIASAVVIALLLALSEANK RKMDKEIIVDLLIWAIPISIISARIYYVIFEWDFYKNNLGEIVKIWHGGIAIYGALIG AVLTAIIFSRIKKISFWQLADVVAPSLIIAQAIGRWGNFMNQEAHGAETTRSFLESLH LPDFIINQMYIDGAYYQPTFLYESLWNVLGFVILLIIRRTKIRRGELFLGYVIWYSFG RFFIEGMRTDSLMWGDFRVSQALSLLLIVLSIGIIIYRRLKMNPPYYMEDKFGKVVKK K" misc_feature complement(2557268..2558032) /gene="lgt" /locus_tag="lmo2482" /note="prolipoprotein diacylglyceryl transferase; Reviewed; Region: PRK12437" /db_xref="CDD:183527" regulatory complement(2558051..2558056) /regulatory_class="ribosome_binding_site" gene complement(2558130..2559068) /locus_tag="lmo2483" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987330" CDS complement(2558130..2559068) /locus_tag="lmo2483" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system" /codon_start=1 /transl_table=11 /product="HPr kinase/phosphorylase" /protein_id="NP_466006.1" /db_xref="GeneID:987330" /translation="MTKSVTVKDLKERLNLELICSETGLERPISTSDLSRPGLELTGF FSYYPEDRVQLFGMTEISFSEGMEPEERLKRYKQMCTKRTPAFVISRNLEVPKELVAA AKEADIPVLRSRLKTTRLSVYITNYLESRLAPVISMHGVLVDIYGLGVLITGSSGVGK SETALELVKRGHRLVADDNVEIRQEDEMTLIGSSPAIIEHLLEIRGLGIINVMTLFGA GAVRSSKKITIVVHLENWDPDKHYDRVGLDQEKTKIFDMDIPKITVPVRPGRNLSVII EVAAMNFRLKNMGYNAAEQFTQDLNNLIGHNSSMND" misc_feature complement(2558142..2559065) /locus_tag="lmo2483" /note="HPr kinase/phosphorylase; Provisional; Region: PRK05428" /db_xref="CDD:235459" regulatory complement(2559076..2559081) /regulatory_class="ribosome_binding_site" gene complement(2559255..2559608) /locus_tag="lmo2484" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987328" CDS complement(2559255..2559608) /locus_tag="lmo2484" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466007.1" /db_xref="GeneID:987328" /translation="MRWIIGVIINSVLFVALSGFFTSFHVDGFTTALLASFILAILNM LIRPILLLLTLPINIFTLGLFTFVVNAIMLEMTTFFIGDSFQIDGFGTALILAAIMAF ANMIINSVLWGNKEN" misc_feature complement(2559261..2559608) /locus_tag="lmo2484" /note="Uncharacterized membrane protein YvlD, DUF360 family [Function unknown]; Region: YvlD; COG1950" /db_xref="CDD:441553" gene complement(2559617..2559817) /locus_tag="lmo2485" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987327" CDS complement(2559617..2559817) /locus_tag="lmo2485" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466008.1" /db_xref="GeneID:987327" /translation="MKKLYKSSSQKMIAGVCGGLAEYFGIEVTIIRLLWAGAVLFFGT GILLYIIAAIIIPKATPESEWE" misc_feature complement(<2559683..2559817) /locus_tag="lmo2485" /note="Phage shock protein PspC (stress-responsive transcriptional regulator) [Transcription, Signal transduction mechanisms]; Region: PspC; COG1983" /db_xref="CDD:441586" regulatory complement(2559619..2559624) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2485" regulatory complement(2559826..2559831) /regulatory_class="ribosome_binding_site" gene complement(2559841..2561052) /locus_tag="lmo2486" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987324" CDS complement(2559841..2561052) /locus_tag="lmo2486" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2486" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466009.1" /db_xref="GeneID:987324" /translation="MEKKLRRSRVDRKVGGVFGGLAEFLGIDATLLRLIYIIITIITM KTGIAIIAYIVALFVIPSSDTSNEEVLERHRRRVEEKRNRHAGRNQARQEVREAMRNS HHHRRQRPENAEPIHHGARKKEARPRPVREFNFDNATFRSFTIRVATGDVIIRSWDKE QMKIRAVLAVHEKARSIRQLSEEKLWDYFFSQTMLDISPDNFTFESKNELLKTDLVIT IPKRLYEQVKIQLLNGNLKYDDTAAEDAIIKTRHGDIRSSGASGKFLSTESADGEIFF KRSTVENVDMSTAKGDIALQGSFLTTIAKAAQGDVEYILENDTSSAADLEAPNGDIRI QIPPTWNVDGTLGTKKEKIYFDLKNAKIWDDADRTFVFTQNAEEISMATLQAKVGNGI IKVSELETKNV" misc_feature complement(2560849..2561049) /locus_tag="lmo2486" /note="Phage shock protein PspC (stress-responsive transcriptional regulator) [Transcription, Signal transduction mechanisms]; Region: PspC; COG1983" /db_xref="CDD:441586" misc_feature complement(2559862..>2560374) /locus_tag="lmo2486" /note="Uncharacterized conserved protein YvlB, contains DUF4097 and DUF4098 domains [Function unknown]; Region: YvlB; COG3595" /db_xref="CDD:442814" regulatory complement(2561060..2561065) /regulatory_class="ribosome_binding_site" gene complement(2561120..2562382) /locus_tag="lmo2487" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987322" CDS complement(2561120..2562382) /locus_tag="lmo2487" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466010.1" /db_xref="GeneID:987322" /translation="MENERKRILELVKQGIISTEEALTLLENISKKEGKTAAKENIRR SAAPREEEQIEEETKEEPSYDYSKGWNNQGNPYTPPKSRKRRPEPTPENHERDEEEGG ENSSKDREDSMRNMVNDLSQAGEKIGSFLNSAFKQVKDMPFPFLTSTKIERDFIYHDT TLSILEFEIANGNIEFKPSDSNDIKVHAMIKLFKEYPEDEALKIFFDKTTLRVDEETL RFESKSKQIVTNLTVYLPRREYDYVSVKMLNGNFHMDELSGRDLFVKTTNGNISIGTL NATLAEIESINGNVRIQNGEIRDVALKTFNGNVAVKGNYYSTNLQTKNGNVNYQLTGN EATFLKAKTGAGNIDVVVPATIGVDGRFHTNLGKLLLDLKDAEILESKTESVSKSITF TKLPNAADSSLKIEAEATTGSVKIRDVK" misc_feature complement(2561129..2562376) /locus_tag="lmo2487" /note="daptomycin-sensing surface protein LiaX; Region: dapto_LiaX; NF038025" /db_xref="CDD:468317" regulatory complement(2562391..2562396) /regulatory_class="ribosome_binding_site" regulatory complement(2562547..2562584) /regulatory_class="terminator" gene complement(2562591..2565461) /gene="uvrA" /locus_tag="lmo2488" /db_xref="GeneID:987320" CDS complement(2562591..2565461) /gene="uvrA" /locus_tag="lmo2488" /experiment="EXISTENCE:[PMID:19448609]" /note="The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit A" /protein_id="NP_466011.1" /db_xref="GeneID:987320" /translation="MDKEKIVIQGARAHNLKNIDVEIPRDKLVVMTGLSGSGKSSLAF DTIYAEGQRRYVESLSAYARQFLGQMDKPDVDLIEGLSPAISIDQKTTSRNPRSTVGT VTEIHDYLRLLYARVGHPVCPNHGIEITSQTIEQMVDRVLEYPEKTRIQIMAPIVSGK KGTHKKTIEEIKKEGYVRIRVDGEIYDINDEIEIEKNKKHSIEIIIDRIVIKEGINTR LYDSIEAALRLADGYAVVDIMGDKELLFSEHYACPYCGFSVGELEPRMFSFNSPFGAC PTCDGLGTKLEVDVDTVIPDRSMSLNEGAIIPWRPISSQYYPQMLASACKEFGIDMDT PLEKLSKEELDIILNGSKDKEFYFEYKNDFGMTRETWIPFEGILPNIERRYRETNSDF TRDQMAQYMTDLPCPSCKGYRLKEETLSVKVNDHHIGQISEFSINEALAFFDGLELSE KETQIAAPIFKEVRARLGFLKNVGLDYLTMSRAAGTLSGGEAQRIRLATQIGSRLTGV LYILDEPSIGLHQRDNDRLISTLQSMRDIGNTLIVVEHDEDTMMAADYLIDIGPGAGE HGGRIVAAGTPEEVANNKNSITGDYLSGKKFIPVPAKRRKGNGLELEIIGAKANNLKN VNAKIPLATFSCVTGVSGSGKSSLVNEVLRKALARKLNRNHAKPGEHKEIKGIENLEK IINIDQSPIGRTPRSNPATYTGAFDDIRDLFASTNEAKVRGYKKGRFSFNVKGGRCEA CKGDGIIKIEMHFLPDVYVPCEVCHGKRYNGETLDIRYKGKNIAEVLEMTVEEGLEYF TNQPRIARKLQTIVDVGLGYIRLGQPATTLSGGEAQRVKLASELHKRSNGKSFYILDE PTTGLHADDIGRLLKVLQRLVEENGDTVLVIEHNLDVIKQADYLIDLGPEGGDGGGQI IATGTPEKIARSKKSYTGKYLKPILERDKERTEERIATAKKK" misc_feature complement(2562639..2565461) /gene="uvrA" /locus_tag="lmo2488" /note="excinuclease ABC subunit UvrA; Region: uvrA; PRK00349" /db_xref="CDD:234734" gene complement(2565469..2567445) /gene="uvrB" /locus_tag="lmo2489" /db_xref="GeneID:987319" CDS complement(2565469..2567445) /gene="uvrB" /locus_tag="lmo2489" /experiment="EXISTENCE:[PMID:19448609]" /note="The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit B" /protein_id="NP_466012.1" /db_xref="GeneID:987319" /translation="MKDKFELVSKYSPQGDQPRAIEQLVAGLKKGLKHQTLLGATGTG KTFTVSNVIQEVNKPTLVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYV PQSDTYIEKDASINDEIDKLRHSATAALFERRDVIIIASVSCIYGLGSPIEYGEMLVS LRVGMEISRDQLLRKLVDIQYDRNDIDFQRGRFRVRGDVVEIFPASRDEHCMRIEFFG DEIERIREVDALTGEIIGEREHVSIFPASHFVTRPDIMKKAIVNIKAELEDRLKVLRA DNKLLEAQRLEQRTNYDLEMMEEMGYCSGIENYSRHLSLRPAGVTPYTLLDYFPDDFQ MVIDESHVTMPQIRGMFNGDQARKQMLVDHGFRLPSALDNRPLRLEEFEKHINQIMFI SATPGPYELEKNPDVIEQIIRPTGLLDPIVEIRPIQGQIDDLMDEINDRVEKNERVLI TTLTKKMSEDLTNYLKEAGVKVQYLHSEVKTLERIEIIRDLRLGVYDVIVGINLLREG IDLPEVSLVAILDADKEGFLRSERSLIQTMGRAARNENGRVIMYADKMTDSMRNSIGE TERRRKIQIEYNEKHGITPKTIKKEIRGIIAATSAADEREAVKQHDLSKMSKKERDVF IEGMEHEMKEAAKALDFERAAELRDALLEIKAEG" misc_feature complement(2565475..2567436) /gene="uvrB" /locus_tag="lmo2489" /note="Excinuclease UvrABC helicase subunit UvrB [Replication, recombination and repair]; Region: UvrB; COG0556" /db_xref="CDD:440322" regulatory complement(2565470..2565475) /regulatory_class="ribosome_binding_site" /gene="uvrB" /locus_tag="lmo2489" regulatory complement(2567454..2567459) /regulatory_class="ribosome_binding_site" regulatory complement(2567615..2567645) /regulatory_class="terminator" gene complement(2567696..2567935) /locus_tag="lmo2490" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987317" CDS complement(2567696..2567935) /locus_tag="lmo2490" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="CsbA protein" /protein_id="NP_466013.1" /db_xref="GeneID:987317" /translation="MDQIISALIFPCLLVILFARITYNRYVGLLLMVILIAASAKLGY TSSMWLIIIDAFSMTIGFVLATYMLRRLKKSGSDF" misc_feature complement(2567708..2567932) /locus_tag="lmo2490" /note="General stress protein CsbA (function unknown) [Function unknown]; Region: CsbA; COG4897" /db_xref="CDD:443925" regulatory complement(2567944..2567949) /regulatory_class="ribosome_binding_site" gene complement(2567956..2568603) /locus_tag="lmo2491" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987316" CDS complement(2567956..2568603) /locus_tag="lmo2491" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2491" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466014.1" /db_xref="GeneID:987316" /translation="MGIHQYFQSLSDLENIYRCPGKFKYQEHSVAEHSYKVTSIAQFF GAVEEEAGNEVNWRALYEKALNHDYSELFIGDIKTPVKYATTELREMLSEVEESMTKN FIEREIPETYQPIYRHLLKEGKDSTLEGKILAISDKVDLLYESFGEIQKGNPENIFVE IYSEALATIYEYREMASVKYFLKEILPDMLAEKGIEKTELPQLTTEITTKALRDA" misc_feature complement(2568037..2568588) /locus_tag="lmo2491" /note="5'-deoxynucleotidase YfbR-like; Region: YfbR-like; pfam12917" /db_xref="CDD:432874" regulatory complement(2568610..2568615) /regulatory_class="ribosome_binding_site" gene complement(2568625..2569011) /locus_tag="lmo2492" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987892" CDS complement(2568625..2569011) /locus_tag="lmo2492" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2492" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466015.1" /db_xref="GeneID:987892" /translation="MKKLSPMQKFIVITGIIVMTIIAILAVIWNNNLTVVIGLSIVQF IMIQLVCYVGIYSHMKVGTARGTKLFSWGILTTLLFSAIIFIFATDNFRTYSAAMIAL IGYAAALMMREIENTNPANKKQKREE" regulatory complement(2569019..2569024) /regulatory_class="ribosome_binding_site" gene complement(2569117..2569422) /locus_tag="lmo2493" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987893" CDS complement(2569117..2569422) /locus_tag="lmo2493" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ArsR family transcriptional regulator" /protein_id="NP_466016.1" /db_xref="GeneID:987893" /translation="MENAKQPLDEETLFSVTQIFKALSDPTRVQILNLLQDREYSVNE IARTLAFNQTTVSHQLRFLKNLRLVKSRREGTTIYYMQDDNHVLELLTQAIRHVHHH" misc_feature complement(2569150..2569377) /locus_tag="lmo2493" /note="metalloregulator ArsR/SmtB family transcription factor; Region: HTH_metalloreg; NF033788" /db_xref="CDD:411368" misc_feature complement(order(2569138..2569146,2569150..2569158, 2569162..2569167,2569222..2569224,2569312..2569314, 2569321..2569326,2569333..2569338,2569345..2569347, 2569354..2569356,2569360..2569365)) /locus_tag="lmo2493" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:238042" misc_feature complement(order(2569183..2569191,2569204..2569212, 2569228..2569233,2569237..2569242,2569249..2569254, 2569258..2569269,2569294..2569302,2569339..2569347, 2569357..2569362)) /locus_tag="lmo2493" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:238042" misc_feature complement(order(2569165..2569167,2569291..2569293, 2569300..2569302)) /locus_tag="lmo2493" /note="putative Zn2+ binding site [ion binding]; other site" /db_xref="CDD:238042" regulatory complement(2569431..2569436) /regulatory_class="ribosome_binding_site" regulatory complement(2569640..2569685) /regulatory_class="terminator" gene complement(2569690..2570349) /locus_tag="lmo2494" /db_xref="GeneID:987895" CDS complement(2569690..2570349) /locus_tag="lmo2494" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PhoU family transcriptional regulator" /protein_id="NP_466017.1" /db_xref="GeneID:987895" /translation="MVVRKIFTEQLNDLHQHLMEMGMLANEAIFKAVKSLVHRDTELA KQVVAEDKAINNMELSLEQRSFELIALQQPVGMDLRKIVTVLKTSSDLERIGDHAVSI AKTAILIGESKVLKPIPEIPEMGEIVKSMLQDVLKAYLAEDEGAAREIAERDNEVDKL HKIVYQKCIHFMQEEPEHIEDVSQLLLVSQYIERIGDYVTNVCEWIVYLKSGEIEDLN R" misc_feature complement(2569693..2570325) /locus_tag="lmo2494" /note="Phosphate uptake regulator PhoU [Inorganic ion transport and metabolism]; Region: PhoU; COG0704" /db_xref="CDD:440468" regulatory complement(2570356..2570361) /regulatory_class="ribosome_binding_site" gene complement(2570362..2571141) /locus_tag="lmo2495" /db_xref="GeneID:987314" CDS complement(2570362..2571141) /locus_tag="lmo2495" /experiment="EXISTENCE:[PMID:19448609]" /note="ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter ATP-binding protein" /protein_id="NP_466018.1" /db_xref="GeneID:987314" /translation="MTTETAEKVEYIIETKDVDLFYGSKQALQKIALNIKKNQVTALI GPSGCGKSTFLRTLNRMNDLIPNVKTTGEIHIGGENVQDPKIDMVNLRKKVGMVFQQA NPFPFSIYDNVAYGPRMHGIKDKKVLDEIVERSLRQAALWEEVHDRLDRSAIGMSGGQ QQRLCIARVLAVKPDVILMDEPTSALDPISTAKVEDLILELKKDYTIVIVTHNMQQAS RISDETAFFLNGRIVEFADTTSIFTNPAEKETEDYISGRFG" misc_feature complement(2570365..2571135) /locus_tag="lmo2495" /note="ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]; Region: PstB; COG1117" /db_xref="CDD:440734" regulatory complement(2571148..2571153) /regulatory_class="ribosome_binding_site" gene complement(2571156..2571971) /locus_tag="lmo2496" /db_xref="GeneID:987313" CDS complement(2571156..2571971) /locus_tag="lmo2496" /experiment="EXISTENCE:[PMID:19448609]" /note="ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter ATP-binding protein" /protein_id="NP_466019.1" /db_xref="GeneID:987313" /translation="MLTKKPEINTILQVTPDPHSLPAAMATEDLHVYYGDNHAIKGVD LTFPENKVTALIGPSGCGKSTYLRALNRMNDEIDGCRMEGQILYDGININRKEVDLYN VRKEIGMVFQKPNPFTKSIYENVAFGLKRHGMKNKKEIMERVEKSLRRAALWDEVKDD LGKSALSLSGGQQQRLCIARAVAMQPKVLLLDEPASALDPISTSKIEDLINELKNKYT IIIVTHNMQQAARVSDYTSFFYLGEVVEFSGTSELFTNPQEKQTEDYISGNFG" misc_feature complement(2571159..2571929) /locus_tag="lmo2496" /note="ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]; Region: PstB; COG1117" /db_xref="CDD:440734" regulatory complement(2571981..2571986) /regulatory_class="ribosome_binding_site" gene complement(2571999..2572883) /locus_tag="lmo2497" /db_xref="GeneID:987312" CDS complement(2571999..2572883) /locus_tag="lmo2497" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter permease" /protein_id="NP_466020.1" /db_xref="GeneID:987312" /translation="MNVKTKDKIATGVFYAIAVLIVIILAGLLGYILVKGVPQLSWKF LTTPPQSFQAGGGIGPEIWNSFYMLVITMIISVPISLGAGIYMAEYARKNWITDLIRT TIEVLSSLPSIVVGLFGFLVFVIQMGWSFSVISGALTLTIFNLPLLIRVVEEALNAIP NTQREAGLALGLSRWETITRVLVPAALPAIITGVILAAGRVFGEAAALIFTAGQSTPI LDFTDWNPVNPASPLNIFRPAETLAVHIWKINGEGIMPDAQAVSDGASAVLILSVLLF NVLARLLGKFVYKRMTSS" misc_feature complement(2572008..2572826) /locus_tag="lmo2497" /note="ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]; Region: PstA; COG0581" /db_xref="CDD:440346" gene complement(2572880..2573803) /locus_tag="lmo2498" /db_xref="GeneID:987897" CDS complement(2572880..2573803) /locus_tag="lmo2498" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter permease" /protein_id="NP_466021.1" /db_xref="GeneID:987897" /translation="MEAIKEKKLTQTSKKAHLETRGKIITFICISIMVIAAASILFFV ISKGLATFTVNKVSFVDFITGTDWNPSQKDASGNPLVGALPMIIGSFAVTLFAACIAG PLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVYGFIGLSVVVPFIRDHISGSGF GIAAATVVLTVMILPTVTSLSVDAIKSVPRHYREASLALGATRFQTIWKVVLRSSRSG ILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSILTMGMGNTVMGTLDN NILWSLAMVLLAMSLFFIIVIRFIGRRRKVK" misc_feature complement(2572883..2573791) /locus_tag="lmo2498" /note="ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]; Region: PstC; COG0573" /db_xref="CDD:440338" regulatory complement(2572892..2572897) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2498" regulatory complement(2573813..2573818) /regulatory_class="ribosome_binding_site" gene complement(2573897..2574805) /locus_tag="lmo2499" /db_xref="GeneID:987906" CDS complement(2573897..2574805) /locus_tag="lmo2499" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter substrate-binding protein" /protein_id="NP_466022.1" /db_xref="GeneID:987906" /translation="MKKKYLGIVAMLAAVMLVFAACGSDSSSADKANGSTKGDKEVSG SLTAVGSTALQPLVEAASKEFTNTNPKAQINVQGGGSGTGLTQVQQGAVEIGNSDVFA EEKDGVDASKLVDHRVAVVGMAPVVNKDVGVKNITKQQLIDIFTGKTTNWKDVGGKDE KITIINRAEGSGTRATFEKWGLDGKTPIKAQEQDSSGTVRKIVSETPGAISYLAFSYI DASVVGLSLDGVEPTEDKVATNDWKIWSYEHMYTNGEPKGLTKTFLKYMTSDEVQNNI VPQLGYQSIKSMKVERDASGKLTDVK" misc_feature complement(2573963..2574679) /locus_tag="lmo2499" /note="Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily; Region: PBP2_phosphate_like_1; cd13653" /db_xref="CDD:270371" misc_feature complement(order(2574290..2574292,2574509..2574511, 2574563..2574568,2574647..2574655)) /locus_tag="lmo2499" /note="chemical substrate binding site [chemical binding]; other site" /db_xref="CDD:270371" regulatory complement(2574816..2574821) /regulatory_class="ribosome_binding_site" regulatory complement(2575008..2575054) /regulatory_class="terminator" gene complement(2575061..2576836) /gene="phoR" /locus_tag="lmo2500" /db_xref="GeneID:987900" CDS complement(2575061..2576836) /gene="phoR" /locus_tag="lmo2500" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component sensor histidine kinase" /protein_id="NP_466023.1" /db_xref="GeneID:987900" /translation="MKKLWLKIGLSFFILFFVVMVIVGIFSGELMKSTYLNMKENQLE DDAKILLQTTNMENLDLDKDAATIQKSLDPLGEDIDARITVIDSKGDVVADTKKDPEK LDNHMNRPEVTDILKKGESVGISIRESDSLGYSMLYVAVPVKHQSKTDGVLRISISLE SVDAAVAKLWGNLALIFGIALVIIAAISVFIARKITRPVREIIEVSTDLANHKYDSRI HGKISGELQDLSISVNTLAESLETQMFEIKQNEQRLNAIVQNLVSGVMLINVDKQVIM TNRTMYQILGETEITGKPFYEVIKSFALSQLIEATFETKTIQQKEIILYFPREMILDA SVSPILGENGEITGIILLLHDITQIRHLENVRSEFVTNVSHELKTPVTALKGFAETLL DGAMYDEMLLKKFLTIIKEESDRLHRLIMDILALSRIEQNPVPENVELVEVDEVIEQS ARTIFEMATEKNIQVIIPEKTIPSVTIETDRDKLQQILINLLSNAINYTPVDGKVEVK LIEQEAEVIIEVTDNGIGIPAKDIDRVFERFYRVDKARSRHSGGTGLGLSIVKHLVEN CGGRIEVESQEEVGSTFRVTLPKKA" misc_feature complement(2576369..2576734) /gene="phoR" /locus_tag="lmo2500" /note="Single Cache-like; Region: sCache_like; pfam16736" /db_xref="CDD:407005" misc_feature complement(<2576042..>2576374) /gene="phoR" /locus_tag="lmo2500" /note="Methyl-accepting chemotaxis protein (MCP) [Signal transduction mechanisms]; Region: Tar; COG0840" /db_xref="CDD:440602" misc_feature complement(2575067..2576152) /gene="phoR" /locus_tag="lmo2500" /note="Sensor histidine kinase WalK [Signal transduction mechanisms]; Region: WalK; COG5002" /db_xref="CDD:444026" gene complement(2576836..2577546) /gene="phoP" /locus_tag="lmo2501" /db_xref="GeneID:987904" CDS complement(2576836..2577546) /gene="phoP" /locus_tag="lmo2501" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component response phosphate regulator" /protein_id="NP_466024.1" /db_xref="GeneID:987904" /translation="MVKILVVDDEASIVTLLQFNIEKAGFEVVTAEDGRTGYELALSE KPDLIVLDLMLPEMDGIEVTKKLRQDKVNVPILMLTAKDEELDKIIGLELGADDYMTK PFSPREVVARIKAILRRTEGKAEIIEELTEDVEATILIGDLKILPDSYEVYLQDDLLD LTPKEFELLLFLANHRGKVFSRDQLLDTVWNYDYVGETRIVDVHVSHLRDKIELDTKQ PKYIKTIRGFGYKMENVK" misc_feature complement(2576875..2577546) /gene="phoP" /locus_tag="lmo2501" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" regulatory complement(2576847..2576852) /regulatory_class="ribosome_binding_site" /gene="phoP" /locus_tag="lmo2501" regulatory complement(2577556..2577561) /regulatory_class="ribosome_binding_site" gene complement(2577696..2578871) /locus_tag="lmo2502" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987905" CDS complement(2577696..2578871) /locus_tag="lmo2502" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2502" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466025.1" /db_xref="GeneID:987905" /translation="MDVFVEILNGIGRLLLQPALYVGILLAILAGFNRVKWERKSFSI SIYSPWLELKNFFGVSLLFGLAISVITSLIGFGVMIEWVAIFNVVACFLLIVGMFRLS STAFTIGITSLIFYFCYYFDVSLAPFTNEVFTYDSIFIDNFMISMTFLLAVLLFVEAF LIQYTSAKNPSPSLRKSKRGKLIGSFQLRKLWFVPIVMFVPGDVFTKIFEWWPVFAIG SQSYSLIILPLFIGFQQQVQTQLPEEASRKIAIEVTTLATIIAVAGLLGIVMPVLTLF AFMFAVIGRFWISYRHYRSEQLAPKKFGPQPDGLVVLGARAATPSARLNLKAGEKITE VNSQPVRTREELYEALNLNRAFCKLKVIDNAGEPRFEQTALYENESFELGLLLIEPR" misc_feature complement(2577762..>2577947) /locus_tag="lmo2502" /note="permuted PDZ domain of Deg/high-temperature requirement factor A (HtrA) family of housekeeping serine proteases and related domains; Region: cpPDZ_Deg_HtrA-like; cl49614" /db_xref="CDD:483954" regulatory complement(2578880..2578886) /regulatory_class="ribosome_binding_site" gene complement(2578899..2580347) /locus_tag="lmo2503" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987903" CDS complement(2578899..2580347) /locus_tag="lmo2503" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cardiolipin synthase" /protein_id="NP_466026.1" /db_xref="GeneID:987903" /translation="MGLLAYLLVILLILNVFFAAVTVFLERRDTSATWAWLLVLTFVP IFGFIIYLIFGRKLSGKKIFDWKGQEKIGIQESTANQIEMIRQKEFPFSDPNVKKHRD LIYLLLVNDGAILTQDNEVELFVDGHEKFDALIADIEKAKDHIHLIYYIFHSDELGNR LMRVLERKAAEGLNVKIIYDAMGSRTTKKSFFRTFQKNGGLVRPFFPSKLPLINFRLN YRNHRKLAIIDGDVGYIGGFNIGDEYLGASKKFGYWRDTHLRVHGKAVYAMQTRFIMD WNSASSTHKIDYKARYFPTFHGKGHTSMQIVSSGPDSEWQQIKNGYIKMINAAKKTIY LQSPYFIPDASLLEAIKIAALSGVDVRVMIPNKPDHAFVYRATTNYAGELMETGAKIF IYDNGFIHAKTLVVDGEIASVGTANMDFRSFRLNFEVNAFIYEKQMVQKLEDAFLEDI LKSYQLTPELYAKRSLWIKFKEAVSRLLSPIL" misc_feature complement(2578902..2580305) /locus_tag="lmo2503" /note="cardiolipin synthase; Region: bac_cardiolipin; TIGR04265" /db_xref="CDD:211988" regulatory complement(2580354..2580359) /regulatory_class="ribosome_binding_site" regulatory complement(2580430..2580461) /regulatory_class="terminator" gene complement(2580470..2581780) /locus_tag="lmo2504" /db_xref="GeneID:987901" CDS complement(2580470..2581780) /locus_tag="lmo2504" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell wall-binding protein" /protein_id="NP_466027.1" /db_xref="GeneID:987901" /translation="MLKKYGVATALSLLIISAPLTGAHADTINDMQKRQNEIEQKKSE IDKNIDSKNSELNHLESAEKDAAKELESLMKSLDDTNKKLKEQEDKVSSENEKLKKLQ KEMEKLRNDIRDRQKVLDNRARAIQTTGTATSYLDMIFEADDFKELVDRVTVVSAIVK ADQNIMQDQKDDQDKLKVAESTSEKKLENLKVLAVELEVSKNNMESQKQEKNDLVMAL ANKKDLTKSEQTLLASEQGALTDEEKRLASNIAGEKAKQEAAIKAAEEKRMQEAAAAS SAKSAAVVKQPSSSSNEATETVSSGGGQFIKPASGILTSGFSERTNPVTGKYESHKGQ DIAGGGTVTVSAAASGTVVFSGFGASGSGFGGYGYVVKIDHGNGFQTLYGHMRAGSLK VVTGQQVSQGQPIGIMGSTGQSTGQHLHFEIHKNGIPVDPAPYI" misc_feature complement(2580473..2581753) /locus_tag="lmo2504" /note="Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning]; Region: EnvC; COG4942" /db_xref="CDD:443969" regulatory complement(2581786..2581791) /regulatory_class="ribosome_binding_site" regulatory complement(2581840..2581878) /regulatory_class="terminator" gene complement(2581900..2583105) /gene="spl" /locus_tag="lmo2505" /db_xref="GeneID:987309" CDS complement(2581900..2583105) /gene="spl" /locus_tag="lmo2505" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidoglycan lytic protein P45" /protein_id="NP_466028.1" /db_xref="GeneID:987309" /translation="MKKNTFIAISLAAVISLTPAFTTNVFADVNTDIQNQDKKINDIK SKKTDLQSDLSGLVADLEKAQEKAKSLQGEFDKTGKELKKLNEDIKSINERIKERETV LKERARAMQKTSNSNAYLEVILDAENLSDLVGRVSAVNQLVDSDKSILEDQQNDEKAL KTKQTAVKKKQEDQATAIHEYEAQQNKIEAQKAEKEAIVAQLASDQASAENAKAGLVS ERDKAAKEATARATALREATSSNVGQESSSSDTSTPSKKSNTTKNVASNDNNSAPSAA TPSSGGYSAMISAANAQLGKPYSLGATGPSAFDCSGFTSYAFRAAGVSLPRTSGGQYA AASKISASQAKPGDLVFFNYGSGIAHVGIYVGGGQMINAQNNGVKYDNITSGYWAKYL VGYGRVANF" misc_feature complement(<2582386..2583027) /gene="spl" /locus_tag="lmo2505" /note="Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning]; Region: EnvC; COG4942" /db_xref="CDD:443969" misc_feature complement(2581912..>2582622) /gene="spl" /locus_tag="lmo2505" /note="invasion associated endopeptidase; Region: PRK13914" /db_xref="CDD:237555" regulatory complement(2583114..2583119) /regulatory_class="ribosome_binding_site" gene complement(2583181..2584065) /gene="ftsX" /locus_tag="lmo2506" /db_xref="GeneID:987902" CDS complement(2583181..2584065) /gene="ftsX" /locus_tag="lmo2506" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division protein FtsX" /protein_id="NP_466029.1" /db_xref="GeneID:987902" /translation="MKFRTVGRHIRESFKSLYRNGWMTFAAASAVTVTLILVSVFFAI LINMNKLATDVENNVQINVHISLSADKKQQQELEKNIEKIDGVDSVSFSSKDDELKKL VGAYGKNFELFKQDNPLYDVFVVEAKEPTQTKTIAKKVEKLQYVDNVEYGEKTVDKLF DTLKWGRYAGIILSIGLLLTAMFLISNTIKIAIFSRRREIEIMKLVGATNWFIRWPFV LEGAWLGLIGSILPVVLTFIGYVNIYNLVNPKLVTSSLSLLPPTPFAYQISGLIIAIG VLIGIWGSVISIRRFLKV" misc_feature complement(2583187..2584059) /gene="ftsX" /locus_tag="lmo2506" /note="permease-like cell division protein FtsX; Region: FtsX_Gpos; NF038347" /db_xref="CDD:468488" gene complement(2584055..2584741) /gene="ftsE" /locus_tag="lmo2507" /db_xref="GeneID:987308" CDS complement(2584055..2584741) /gene="ftsE" /locus_tag="lmo2507" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division protein FtsE" /protein_id="NP_466030.1" /db_xref="GeneID:987308" /translation="MILMEDVYKKYPNGITAANGLNINIGEGEFVYVVGPSGAGKSTF IKMIYREERATKGKIIVDKFDLINMKNREIPYLRRNVGVVFQDYKLLQSKTVYENIAY AMEVVETEPSVIKERVMEVLDLVNLKHKVRMLPDELSGGEQQRISIARSIANMPKVLI ADEPTGNLDPDTSWEIMNILEEISNRGTTIVMATHNKEIVNTLKHRVIAIENGRIVRD EQQGEYGYEI" misc_feature complement(2584073..2584741) /gene="ftsE" /locus_tag="lmo2507" /note="Cell division ATPase FtsE [Cell cycle control, cell division, chromosome partitioning]; Region: FtsE; COG2884" /db_xref="CDD:442130" regulatory complement(2584074..2584079) /regulatory_class="ribosome_binding_site" /gene="ftsE" /locus_tag="lmo2507" regulatory complement(2584749..2584754) /regulatory_class="ribosome_binding_site" regulatory complement(2585193..2585240) /regulatory_class="terminator" gene complement(2585245..2586108) /locus_tag="lmo2508" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984634" CDS complement(2585245..2586108) /locus_tag="lmo2508" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466031.1" /db_xref="GeneID:984634" /translation="MTNKRKKQPLSPVASKLIEYIYVIIGAALIALAFNVLLLPNHVA SGGVSGISTIINYLTGWNPAFIQWAFNIPLFLAGLFFLGYQFGLKTFVGTMLLPFFVY LTQGLEPWTHEPLVAALFGGVLVGMGLGIVFRGKASTGGTDVAAQILHKYSHLTLGIC VALIDGFVVISAMFVFDIESGLYALVGLFATSKTIDLVQVGLNQSKTVFIISENQEAI RQAILFKIDRGITRLSAKGGYTEDDKQILLCVIAQSEFSRLKEVIKEIDPEAFVVVMS ASEVMGEGFTS" misc_feature complement(2585248..2586108) /locus_tag="lmo2508" /note="Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains [Function unknown]; Region: YitT; COG1284" /db_xref="CDD:440895" gene complement(2586114..2587097) /gene="prfB" /locus_tag="lmo2509" /db_xref="GeneID:986491" CDS complement(2586114..2587097) /gene="prfB" /locus_tag="lmo2509" /experiment="EXISTENCE:[PMID:19448609]" /note="recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism" /codon_start=1 /transl_table=11 /product="peptide chain release factor 2" /protein_id="NP_466032.1" /db_xref="GeneID:986491" /translation="MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISL ELLKEEADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQ DWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR LVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTD SAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKE IGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSRIG" misc_feature complement(2586123..2587097) /gene="prfB" /locus_tag="lmo2509" /note="This domain is found in peptide chain release factors; Region: PCRF; cl40670" /db_xref="CDD:477417" regulatory complement(2586120..2586125) /regulatory_class="ribosome_binding_site" /gene="prfB" /locus_tag="lmo2509" gene complement(2587300..2589813) /gene="secA" /locus_tag="lmo2510" /gene_synonym="azi; div" /db_xref="GeneID:985470" CDS complement(2587300..2589813) /gene="secA" /locus_tag="lmo2510" /gene_synonym="azi; div" /experiment="EXISTENCE:[PMID:19448609]" /note="functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecA" /protein_id="NP_466033.1" /db_xref="GeneID:985470" /translation="MAGLLKKIFESGKKDVKYLERKADEIIALADETAALSDDALREK TVEFKERVQKGETLDDLLVEAFAVAREGAKRALGLYPFKVQLMGGIVLHEGNIAEMKT GEGKTLTATLPVYLNALSGEGVHVVTVNEYLAHRDAEEMGVLYNFLGLSVGLNLNALS STEKREAYACDITYSTNNELGFDYLRDNMVVYKEEMVQRPLAFAVIDEVDSILVDEAR TPLIISGEAEKSTILYVRANTFVRTLTEEEDYTVDIKTKSVQLTEDGMTKGENYFDVE NLFDLENTVILHHIAQALKANYTMSLDVDYVVQDDEVLIVDQFTGRIMKGRRFSEGLH QALEAKEGVTIQNESKTMATITFQNYFRMYKKLAGMTGTAKTEEEEFRDIYNMRVIEI PTNKVIIRDDRPDLIYTTIEAKFNAVVEDIAERHAKGQPVLVGTVAIETSELISSKLK RKGIKHDVLNAKQHEREADIIKHAGERGAVVIATNMAGRGTDIKLGEGTIEAGGLAVI GTERHESRRIDNQLRGRSGRQGDPGVTQFYLSMEDELMRRFGSDNMKSMMERFGMAED AIQSKMVSRAVESAQRRVEGNNFDSRKQVLQYDDVLRQQREVIYKQRYEVINAENSLR EIIEQMIQRTVNFIVSSNASSHEPEEAWNLQGIIDYVDANLLPEGTITLEDLQNRTSE DIQNLILDKIKAAYDEKETLLPPEEFNEFEKVVLLRVVDTKWVDHIDAMDHLRDGIHL RAYGQIDPLREYQSEGFEMFEAMVSSIDEDVARYIMKAEIRQNLEREQVAKGEAINPA EGKPEAKRQPIRKDQHIGRNDPCPCGSGKKYKNCHGKEA" misc_feature complement(2587303..2589813) /gene="secA" /locus_tag="lmo2510" /gene_synonym="azi; div" /note="Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking, secretion, and vesicular transport]; Region: SecA; COG0653" /db_xref="CDD:440418" regulatory complement(2589820..2589825) /regulatory_class="ribosome_binding_site" regulatory complement(2589990..2590022) /regulatory_class="terminator" gene complement(2590044..2590607) /locus_tag="lmo2511" /db_xref="GeneID:986743" CDS complement(2590044..2590607) /locus_tag="lmo2511" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466034.1" /db_xref="GeneID:986743" /translation="MLKYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNL KVYSDKNAKVEVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRD KGAERDYFAYSDVNGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFY VYTDAETNGTNIVYSRKDGKYGLIETN" misc_feature complement(2590293..2590601) /locus_tag="lmo2511" /note="Ribosome-associated translation inhibitor RaiA [Translation, ribosomal structure and biogenesis]; Region: RaiA; COG1544" /db_xref="CDD:441153" misc_feature complement(2590059..2590217) /locus_tag="lmo2511" /note="Sigma 54 modulation/S30EA ribosomal protein C terminus; Region: Ribosom_S30AE_C; pfam16321" /db_xref="CDD:435275" regulatory complement(2590615..2590620) /regulatory_class="ribosome_binding_site" gene complement(2590802..2591458) /gene="comFC" /locus_tag="lmo2512" /db_xref="GeneID:987303" CDS complement(2590802..2591458) /gene="comFC" /locus_tag="lmo2512" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein ComFC" /protein_id="NP_466035.1" /db_xref="GeneID:987303" /translation="MTNCLLCFQPVRQSASWEISWLFEPLPICCNLCLAGFEKLTGLL CKNCSKESLDDVCEDCQSRTHFLDSNKSIYRYNDFAKEYMKKFKFQGDYEIGAIFKKE LSTFLSEKKEKIVPIPVSETRKLERGFNQTTAILKQSGILYEELLAKKHTEKQSKKTK RERLASEQAFYFSGKEILKSTEVILFDDIYTTGSTLNLAAQILKEAGVHKVSALTIFR " misc_feature complement(2590805..2591326) /gene="comFC" /locus_tag="lmo2512" /note="DNA utilization protein ComFC/GntX, contains phosphoribosyltransferase domain [General function prediction only]; Region: ComFC; COG1040" /db_xref="CDD:440662" gene complement(2591451..2592770) /gene="comFA" /locus_tag="lmo2513" /db_xref="GeneID:987745" CDS complement(2591451..2592770) /gene="comFA" /locus_tag="lmo2513" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="competence protein comFA" /protein_id="NP_466036.1" /db_xref="GeneID:987745" /translation="MDIFPGRLYQEREIESNEGLREVVAIESNKCFRCGNTDAQLFGK MCCALCKREDCIYCRNCIVMGRVNSCQKLYYQQAMLLPKTKEILLRWEGVLSAGQRKA SNAVVINLKGKMDMLLWAVAGSGKTEMMFEGMDWALRQGFRICVASPRVDVCLELLPR LKEAFPSMDIVCLYGDSKDNYQGEQFVIATTHQLIRFYETFQVIFIDEVDAFPYAKDP FLEYAVMKARTKEGSTIIITATPEKKWQEECVKGKRNFVKIPGRYHRKKLPVPRTCWI GPWKKNLAKGKISPKLIQWMNGVEKKDQPALIFFPEIDAMNKFAKALENKGYIRPVTV HSADELRKEKVEWLRKGKIKLLLTTTILERGVTFTDVQVAVFGSEGRIFTEAALVQIS GRAGRKISHPTGDVCFFHYGKTIEMKQAISHIQKMNQQGVIEGMLDD" misc_feature complement(2591469..2592767) /gene="comFA" /locus_tag="lmo2513" /note="Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [Replication, recombination and repair]; Region: ComFA; COG4098" /db_xref="CDD:443274" regulatory complement(2591467..2591472) /regulatory_class="ribosome_binding_site" /gene="comFA" /locus_tag="lmo2513" regulatory complement(2592780..2592785) /regulatory_class="ribosome_binding_site" regulatory complement(2592929..2592959) /regulatory_class="terminator" gene complement(2592965..2593816) /locus_tag="lmo2514" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985904" CDS complement(2592965..2593816) /locus_tag="lmo2514" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466037.1" /db_xref="GeneID:985904" /translation="MNEKIAVVTDSTTYLPDEVKEQLRINVVPLSVIIDGKSYREGEE LSATDFYRKVKEAENFPTSSQPAPGEFIHLFENLKEQGFDTVISIHLSSGISGTFQNA ASAGELIEGLNVVAYDSELSCMAQGMFAVKAAEMALANEPLDQIIQKLDKIKQAQDAY FMVDDLNNLQRGGRLNGAQALVGSLLQIKPILHFNDKQIVLFEKVRTQKKALKRIEDI LQKAVQNKTAEKAYVIHGNDLAKGEAWLAQLEAKFPEVTFELSYFGPVIGTHLGEGAL GLTWSIK" misc_feature complement(2592977..2593804) /locus_tag="lmo2514" /note="EDD domain protein, DegV family; Region: DegV; TIGR00762" /db_xref="CDD:273257" regulatory complement(2593822..2593827) /regulatory_class="ribosome_binding_site" gene complement(2593837..2594523) /locus_tag="lmo2515" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987300" CDS complement(2593837..2594523) /locus_tag="lmo2515" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="two-component response regulator DegU" /protein_id="NP_466038.1" /db_xref="GeneID:987300" /translation="MALKIMIVDDHQLFREGIKRILELEDSFEVVAEAENGKNIVAKV REYKPDIVLMDINMPTVNGLDATEMLVRQFPSIKVIVLTIHDTDEYVTEALRAGAVGY LLKEMDAHELVEAVKIVDNGGAYIHPRVAIKLIREYRHLASTNTSQGVYGYQQPEVKM PLHILTHRECEVLQLLTDGKSNRGIGETLFISEKTVKNHVSSILQKMKVNDRTQAVVT AIKHGWVYIR" misc_feature complement(2593849..2594517) /locus_tag="lmo2515" /note="DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains [Signal transduction mechanisms, Transcription]; Region: CitB; COG2197" /db_xref="CDD:441799" misc_feature complement(2594167..2594511) /locus_tag="lmo2515" /note="phosphoacceptor receiver (REC) domain of NarL (Nitrate/Nitrite response regulator L) family response regulators; Region: REC_NarL-like; cd17535" /db_xref="CDD:381090" regulatory complement(2594534..2594539) /regulatory_class="ribosome_binding_site" regulatory 2594896..2594901 /regulatory_class="ribosome_binding_site" gene 2594908..2595543 /locus_tag="lmo2516" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987299" CDS 2594908..2595543 /locus_tag="lmo2516" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466039.1" /db_xref="GeneID:987299" /translation="MLDHYLTIHSDGKHEIIIEKSRFICHIKRATTETEAQTFIQEIK KEHRDATHNCSAYIIGENDQYQKAHDDGEPSGTAGFPMLEILKKKSLKNVAVVVTRYF GGTKLGAGGLVRAYGSAVSEAIQAIGIVECKLATIVECSFAYPLLGKVENALELKAYQ IDKKEFTEKVVLHIFVDNDELQDFFNWITEISNGQLEYKEGPQKYREKDVT" misc_feature 2594911..2595504 /locus_tag="lmo2516" /note="Putative translation regulator, IMPACT (imprinted ancient) protein family [General function prediction only]; Region: YIH1; COG1739" /db_xref="CDD:441345" gene 2595485..2596090 /locus_tag="lmo2517" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987297" CDS 2595485..2596090 /locus_tag="lmo2517" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2517" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466040.1" /db_xref="GeneID:987297" /translation="MGNWNIKKDHKNIEKRMSLSMSTNVFIQLPDTILTKRTTLKKTS IADATTLFDIWSDDEVAQFMNIEKFSTILQAEEMIQAIENEPNACRYTIFTTDDSLNA IGSLGINDINKTNQTIEIGYELAKSHWRQGFMFEILTTFLTTVKPYLPYKVLTAKVLP DNVASIKLLKKLGFELTTTGQELDLHSGRICEISNYRMLLK" misc_feature 2595578..2596087 /locus_tag="lmo2517" /note="Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: RimL; COG1670" /db_xref="CDD:441276" regulatory 2596252..2596257 /regulatory_class="ribosome_binding_site" gene 2596266..2597324 /locus_tag="lmo2518" /db_xref="GeneID:984500" CDS 2596266..2597324 /locus_tag="lmo2518" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LytR family transcriptional regulator" /protein_id="NP_466041.1" /db_xref="GeneID:984500" /translation="MSKGTDDSRRSSKKYKRRRKILFWILIPVMCLVLAGVGYGTYLF SKTKLAADNSYDNVRNGKASTLRTNDIEPIKDSFSILIIGVDTSSTRAENGNPRSDSL ILATFNVKDSRVEMTSIPRDSYVHIEDSAKDIDKYTKINAAHAYGGPELTMKTVEEEF KIPIDYYVRFDFDAFLKIVDALDGIDVDVPVDFTEQDSKDNAGAITLKKGPQHLNAEQ ALALARTRHIDSDIERGKRQQLIIKSIVSEATSISSVSKYSDIIEVVGDNMKTNLTFN QMLSIAKYGMTNKIDIKSLNLKGDSNPMDGIYYYKLDESSVQSISNEFADELGIKQPF PGAAPYSDESSSTTSSSN" misc_feature 2596497..2597246 /locus_tag="lmo2518" /note="Anionic cell wall polymer biosynthesis enzyme TagV/TagU, LytR-Cps2A-Psr (LCP) family (peptidoglycan teichoic acid transferase) [Cell wall/membrane/envelope biogenesis]; Region: Cps2a; COG1316" /db_xref="CDD:440927" regulatory complement(2597319..2597358) /regulatory_class="terminator" regulatory 2597330..2597369 /regulatory_class="terminator" gene complement(2597363..2598415) /locus_tag="lmo2519" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986488" CDS complement(2597363..2598415) /locus_tag="lmo2519" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="teichoic acid linkage unit synthesis protein" /protein_id="NP_466042.1" /db_xref="GeneID:986488" /translation="MLIWSILISFAVGIIMVPIIRKFAFRINAVDTPRERHKHTKTTA TLGGLAIFISFSVGMILAPIDKSGFLPIYFGALIIIATGFIDDIFDLSPKWKMLGQIL AALCVTVWGDITINFINVPFYGQVDFGYFAIPLSIIWIVAIVNALNLIDGLDGLAGGI SIIALMTIAGMALLLKDVFVAPVALILVAAVAAFLIYNFPPASIFMGDTGALFLGYMI AVLSLMGFKNVTFISLLVPLIILGVPLSDTFFAIVRRLKERMPISSADRSHIHHRLMA LGFTEKQTVLLIYCMALLFSMTGFVFSFSTTWGAMLLLLLLIFSIEIIVEFIGLIGED YRPILNLLQKIHRKRK" misc_feature complement(2597549..2598412) /locus_tag="lmo2519" /note="UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase [Cell wall/membrane/envelope biogenesis]; Region: Rfe; COG0472" /db_xref="CDD:440240" gene complement(2598423..2599547) /locus_tag="lmo2520" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987296" CDS complement(2598423..2599547) /locus_tag="lmo2520" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="O-succinylbenzoate-CoA synthase" /protein_id="NP_466043.1" /db_xref="GeneID:987296" /translation="MYFQEARLIHVELPLIAPFKTSYGELNSKDFYIIELVNEEGIRG YGELEAFPLPDYTEETLSTAISIVKQHLLPILAQKEIRTPQEINQMFSWIQGNEMAKA AVELAVWDAFAKNEKLSLAKMIGAEKDSIAVGVSIGLQPDAETLVRLVSQYMDEGYER VKLKIAPKKDIQFVKAVREKFPNLSLMADANSAYNREDFWLLKELDHFNLEMIEQPFG AKDFVDHAWLQKKLKTRICLDENIRSLDDLKQAHMLGSCQAVNLKLARVGGMSEALKI AKYCSDNNLLVWCGGMLEAGIGRAHNIALAARAEFTFPGDISASNRYFNKDIVSPAFV LNQGKLTVPTGQGIGVALDLDVLQKYTKSTERILLNKGWS" misc_feature complement(2598471..2599532) /locus_tag="lmo2520" /note="N-acylamino acid racemase (NAAAR), an octameric enzyme that catalyzes the racemization of N-acylamino acids. NAAARs act on a broad range of N-acylamino acids rather than amino acids. Enantiopure amino acids are of industrial interest as chiral building...; Region: NAAAR; cd03317" /db_xref="CDD:239433" misc_feature complement(order(2598669..2598677,2598759..2598761, 2598831..2598833,2598906..2598908,2598981..2598983, 2599056..2599058,2599062..2599064,2599380..2599382, 2599485..2599487,2599491..2599493)) /locus_tag="lmo2520" /note="active site" /db_xref="CDD:239433" misc_feature complement(order(2598711..2598716,2598723..2598725, 2598789..2598791,2598798..2598803,2598810..2598812, 2598879..2598881,2598888..2598890,2598894..2598896, 2598972..2598974,2599161..2599163,2599167..2599169, 2599173..2599175,2599179..2599181,2599194..2599202, 2599212..2599214,2599254..2599262,2599290..2599292, 2599335..2599337,2599347..2599352,2599368..2599370, 2599374..2599376,2599380..2599394)) /locus_tag="lmo2520" /note="octamer interface [polypeptide binding]; other site" /db_xref="CDD:239433" regulatory complement(2598426..2598431) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2520" gene complement(2599548..2600282) /locus_tag="lmo2521" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984554" CDS complement(2599548..2600282) /locus_tag="lmo2521" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="polyglycerol phosphate biosynthesis protein TagA" /protein_id="NP_466044.1" /db_xref="GeneID:984554" /translation="MKKQEISILNIPFYNTTQAGFVEELYMAAKNGERRFVVTANPEI VMHARTDKEFEAILGQADYIVPDGIGIIMASEKLGEPLKERVTGYDTMVGLLNKPLNC YFLGAKPEISEVVEAKVREKFPQAVVCGVHHGYFDVLESEGIAKEILVSQPDVIFVAL GSPAQEKWILSQIANFTKGIFIGVGGSFDVLTDSVKRAPKIWIKLRLEWVYRLLSNPS RWKRFFAIPQFMLAIRKERKRLKKGE" misc_feature complement(2599566..2600282) /locus_tag="lmo2521" /note="UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF family [Cell wall/membrane/envelope biogenesis]; Region: WecG; COG1922" /db_xref="CDD:441525" regulatory complement(2599553..2599558) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2521" regulatory complement(2600288..2600293) /regulatory_class="ribosome_binding_site" regulatory complement(2600350..2600391) /regulatory_class="terminator" gene complement(2600408..2601241) /locus_tag="lmo2522" /db_xref="GeneID:987898" CDS complement(2600408..2601241) /locus_tag="lmo2522" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell wall-binding protein" /protein_id="NP_466045.1" /db_xref="GeneID:987898" /translation="MKKTVVAIAAGLIIAGSGSTQAFAAEYKVQDGDSLWKISNENNV SIKQLKEDNNLSSDIIFPNQTLQVNSSEKKSTTNNNSEYTVVAGDTLGHIAVDNGVTV NQLKSWNNLSSDLIIVGQKLSIGNKASASESNTSKNNSTANNSANNKVTEQPKEEKAA PTTQKSTSSNEASSNSSSAQGNVSKELTVTATAYSKAEPGMGHMTATGIDLNDNSRVI AVDPSVIPLGSKVYVEGYGQAIAADTGGAIKGNKIDVHLNSVQEANNWGVKQVKVQIL D" misc_feature complement(2600831..>2601193) /locus_tag="lmo2522" /note="1,4-beta-N-acetylmuramoylhydrolase; Region: PRK06347" /db_xref="CDD:180536" misc_feature complement(2600411..2600680) /locus_tag="lmo2522" /note="3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases [Function unknown]; Region: COG3584" /db_xref="CDD:442803" regulatory complement(2601254..2601259) /regulatory_class="ribosome_binding_site" gene complement(2601632..2601997) /locus_tag="lmo2523" /db_xref="GeneID:987294" CDS complement(2601632..2601997) /locus_tag="lmo2523" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="single-strand DNA-binding protein" /protein_id="NP_466046.1" /db_xref="GeneID:987294" /translation="MINQVTLVGRLTKEPELKWTTEDRAVLNLTLALNRFGKNKRVDN DADFIQCVIWGKRAEATAEFCTKGQLVGVVGELQSRNYLNKEEQKIYITEVLVHQIRY LSSRNKDERVVNIPQEEDE" misc_feature complement(2601668..2601994) /locus_tag="lmo2523" /note="Single-stranded DNA-binding protein [Replication, recombination and repair]; Region: Ssb; COG0629" /db_xref="CDD:440394" regulatory complement(2602005..2602010) /regulatory_class="ribosome_binding_site" regulatory complement(2602202..2602240) /regulatory_class="terminator" gene complement(2602249..2602683) /gene="fabZ" /locus_tag="lmo2524" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987293" CDS complement(2602249..2602683) /gene="fabZ" /locus_tag="lmo2524" /experiment="EXISTENCE:[PMID:19448609]" /note="in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP" /codon_start=1 /transl_table=11 /product="(3R)-hydroxymyristoyl-ACP dehydratase" /protein_id="NP_466047.1" /db_xref="GeneID:987293" /translation="MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEF FNGHFPEYPVMPGVLIVEALAQTSGIAMMQSEANKGKIGLFAGIDGCRFKRQVVPGDQ LLLEAEITRMRGAIAKAKVKATVEGDLVCEAEIMFALSDLPK" misc_feature complement(2602261..2602683) /gene="fabZ" /locus_tag="lmo2524" /note="3-hydroxyacyl-ACP dehydratase FabZ; Region: fabZ; PRK00006" /db_xref="CDD:234568" regulatory complement(2602690..2602694) /regulatory_class="ribosome_binding_site" gene complement(2602705..2603700) /gene="mbl" /locus_tag="lmo2525" /db_xref="GeneID:986838" CDS complement(2602705..2603700) /gene="mbl" /locus_tag="lmo2525" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="rod shape-determining protein MreB" /protein_id="NP_466048.1" /db_xref="GeneID:986838" /translation="MAKDVGIDLGTANVLIHVKGRGIVVNEPAVVAINNKTGQVLAVG TEARDMVGRTPGDITAIKPMKDGVIADFDIVQEMLRFFIQKLNLKTFFSRPRILICCP TNITSVEQKAIREVAEKSGGKQVFLEEEPKVAAIGAGMEIFEPSGNMIIDIGGGTADV AVLSMGDIVTSQSVKVAGNKWDADILNYVKRKYNLLIGERTAENIKVTIGTACQGAKE EKMEIRGRDLVSGLPKTISITSSEVEEAIHDSLHLMVLAAKQVLEQTPPELSADIIDR GIIMTGGGSLLHGLDELMSEQLKVPVLITENPLDVVALGTGILLDSLTNKKRNRF" misc_feature complement(2602732..2603700) /gene="mbl" /locus_tag="lmo2525" /note="rod shape-determining protein Mbl; Provisional; Region: PRK13928" /db_xref="CDD:237563" regulatory complement(2603711..2603716) /regulatory_class="ribosome_binding_site" regulatory complement(2603817..2603846) /regulatory_class="terminator" gene complement(2603863..2605155) /gene="murA" /locus_tag="lmo2526" /db_xref="GeneID:984514" CDS complement(2603863..2605155) /gene="murA" /locus_tag="lmo2526" /EC_number="2.5.1.7" /experiment="EXISTENCE:[PMID:19448609]" /note="adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /protein_id="NP_466049.1" /db_xref="GeneID:984514" /translation="MEKIIVRGGKQLNGSVKMEGAKNAVLPVIAATLLASKGTSVLKN VPNLSDVFTINEVLKYLNADVSFVNDEVTVDATGEITSDAPFEYVRKMRASIVVMGPL LARTGSARVALPGGCAIGSRPVDLHLKGFEAMGAVVKIENGYIEATAEKLVGAKVYLD FPSVGATQNIMMAATLAEGTTVIENVAREPEIVDLANFLNQMGARVIGAGTEVIRIEG VKELTATEHSIIPDRIEAGTFMIAAAITGGNVLIEDAVPEHISSLIAKLEEMGVQIIE EENGIRVIGPDKLKAVDVKTMPHPGFPTDMQSQMMVIQMLSEGTSIMTETVFENRFMH VEEMRRMNADMKIEGHSVIISGPAKLQGAEVAATDLRAAAALILAGLVADGYTQVTEL KYLDRGYNNFHGKLQALGADVERVDDSKVDVTNLASLF" misc_feature complement(2603908..2605155) /gene="murA" /locus_tag="lmo2526" /note="UDP-N-acetylglucosamine enolpyruvyl transferase [Cell wall/membrane/envelope biogenesis]; Region: MurA; COG0766" /db_xref="CDD:440529" regulatory complement(2605164..2605169) /regulatory_class="ribosome_binding_site" gene complement(2605337..2605573) /locus_tag="lmo2527" /db_xref="GeneID:987291" CDS complement(2605337..2605573) /locus_tag="lmo2527" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466050.1" /db_xref="GeneID:987291" /translation="MYNIIMESPYVIIISHLLFIVITFWALQAINYEKFIKKNHVTQA RLLFVIISIVLGYTLSNFFLDYLTASKQLINFFS" misc_feature complement(2605340..2605564) /locus_tag="lmo2527" /note="Uncharacterized membrane protein YwzB [Function unknown]; Region: YwzB; COG4836" /db_xref="CDD:443864" regulatory complement(2605583..2605588) /regulatory_class="ribosome_binding_site" regulatory complement(2605651..2605685) /regulatory_class="terminator" gene complement(2605697..2606101) /gene="atpC" /locus_tag="lmo2528" /db_xref="GeneID:987290" CDS complement(2605697..2606101) /gene="atpC" /locus_tag="lmo2528" /experiment="EXISTENCE:[PMID:19448609]" /note="part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane" /codon_start=1 /transl_table=11 /product="ATP synthase F0F1 subunit epsilon" /protein_id="NP_466051.1" /db_xref="GeneID:987290" /translation="MGSLNVSIVTPDGPVYEGVAQMVIARTKAGELGILPGHVPLVAP LKIDIVRLKVESGEEWVAVNGGFMEVNGEEVNILADTAEREQDIDIDRAEKAKQRAEE ELSRAKEQKVDEVMAQLALQRAINRIHAKEHN" misc_feature complement(2605700..2606101) /gene="atpC" /locus_tag="lmo2528" /note="F0F1 ATP synthase subunit epsilon; Validated; Region: atpC; PRK00571" /db_xref="CDD:234796" regulatory complement(2606110..2606115) /regulatory_class="ribosome_binding_site" gene complement(2606123..2607544) /gene="atpD" /locus_tag="lmo2529" /db_xref="GeneID:986860" CDS complement(2606123..2607544) /gene="atpD" /locus_tag="lmo2529" /EC_number="3.6.3.14" /experiment="EXISTENCE:[PMID:19448609]" /note="Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit" /codon_start=1 /transl_table=11 /product="ATP synthase F0F1 subunit beta" /protein_id="NP_466052.1" /db_xref="GeneID:986860" /translation="MSKGQVIQVMGPVVDVKFEGGNLPEIYNALVIEYKSDAEEAPTS QLTLEVAIQLGDDVVRTIAMASTDGVQRGMEVIDTGSPITVPVGTVTLGRVFNVLGNT IDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYLKGGKIGLFGGA GVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIEKTAMVFGQM NEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG YQPTLATEMGQLQERITSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERK LTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAILGMDEL SDEDKQSVSRARRVQFFLSQNFHVAEQFTGQKGSYVPVKETVKGFKDLLAGKYDHIPE DAFRSVGRIEDVLEKAKDMGVEV" misc_feature complement(2606126..2607544) /gene="atpD" /locus_tag="lmo2529" /note="FoF1-type ATP synthase, beta subunit [Energy production and conversion]; Region: AtpD; COG0055" /db_xref="CDD:439825" regulatory complement(2607554..2607559) /regulatory_class="ribosome_binding_site" gene complement(2607605..2608477) /gene="atpG" /locus_tag="lmo2530" /db_xref="GeneID:986487" CDS complement(2607605..2608477) /gene="atpG" /locus_tag="lmo2530" /experiment="EXISTENCE:[PMID:19448609]" /note="Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit" /codon_start=1 /transl_table=11 /product="ATP synthase F0F1 subunit gamma" /protein_id="NP_466053.1" /db_xref="GeneID:986487" /translation="MASLIDIKQRITSTRKTSQITKAMQMVSAAKLGRAESNARSYEP YVSKIKDVVTHVASTGNSSDHPMLVSRPVHRTGYIVLTSDTGLAGSYNSSVIKEVFQE INKKHTSSDEYAIITVGRSARDFFKARQMNVVLEVQGITDHPIFAEIKDIASNTVQMF EDGVYDEVFIYYNHHINSISSELRKEQLLPLTEFHEKGKETDVDLTTYEFEPSEQEIL EVLLPQYVESLIFGALLDAKAAEHAARMTAMRSATDNASDLISDLSLQYNRARQAAIT QEITEIVGGAAALE" misc_feature complement(2607611..2608477) /gene="atpG" /locus_tag="lmo2530" /note="F0F1 ATP synthase subunit gamma; Validated; Region: PRK05621" /db_xref="CDD:235535" misc_feature complement(order(2607620..2607637,2607641..2607643, 2607650..2607655,2607662..2607667,2607671..2607676, 2607683..2607685,2607701..2607703,2607710..2607715, 2607722..2607724,2608094..2608096,2608103..2608108, 2608115..2608120,2608208..2608219,2608223..2608225, 2608385..2608390,2608397..2608402,2608406..2608411, 2608418..2608420,2608430..2608432,2608448..2608450, 2608463..2608465)) /gene="atpG" /locus_tag="lmo2530" /note="core domain interface [polypeptide binding]; other site" /db_xref="CDD:213394" misc_feature complement(order(2607806..2607808,2607815..2607820, 2607827..2607829,2608322..2608327,2608334..2608336, 2608343..2608348,2608352..2608357)) /gene="atpG" /locus_tag="lmo2530" /note="delta subunit interface [polypeptide binding]; other site" /db_xref="CDD:213394" misc_feature complement(order(2607806..2607811,2607818..2607820, 2608061..2608078,2608109..2608111)) /gene="atpG" /locus_tag="lmo2530" /note="epsilon subunit interface [polypeptide binding]; other site" /db_xref="CDD:213394" regulatory complement(2608487..2608492) /regulatory_class="ribosome_binding_site" gene complement(2608515..2610029) /gene="atpA" /locus_tag="lmo2531" /db_xref="GeneID:986486" CDS complement(2608515..2610029) /gene="atpA" /locus_tag="lmo2531" /EC_number="3.6.3.14" /experiment="EXISTENCE:[PMID:19448609]" /note="produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit" /codon_start=1 /transl_table=11 /product="ATP synthase F0F1 subunit alpha" /protein_id="NP_466054.1" /db_xref="GeneID:986486" /translation="MSIKAEEISSIIKQQIENYHSELKVSDVGTVTYIGDGIARAHGL DNAMAGELLEFSNGVMGMAQNLETNDVGIIILGPYTEIREGDEVRRTGKIMEVPVGEA LIGRVVNSLGQPVDGLGPIETTGTRPIEAVAPGVMQRQSVNEPLQTGIKAIDALVPIG RGQRELIIGDRQTGKTSVAIDTILNQADQDMICIYVAIGQKESTVRNAVETLRHHGAL DYTIVVTAAASQPAPLLYLAPYAGVAMAEEFMYNGKHVLVVYDDLSKQAAAYRELSLL LRRPPGREAYPGDVFYLHSRLLERAAKLNDSLGGGSITALPFVETQAGDISAYIPTNV ISITDGQIFLQSDLFFSGVRPAINAGLSVSRVGGSAQIKAMKTVAGTLRLDLAAYREL ESFSQFGSDLDAATRAKLERGKRTVEVLKQDLHKPLKVEKQVLILYALVHKYLDDVPV HDVLRFESEMNTWFDHNHPELLEEIRTTKKLPDEAKLEAALKEFKNTFVPSEEK" misc_feature complement(2608530..2610029) /gene="atpA" /locus_tag="lmo2531" /note="F0F1 ATP synthase subunit alpha; Validated; Region: PRK09281" /db_xref="CDD:236448" regulatory complement(2610037..2610042) /regulatory_class="ribosome_binding_site" gene complement(2610056..2610595) /gene="atpH" /locus_tag="lmo2532" /db_xref="GeneID:986758" CDS complement(2610056..2610595) /gene="atpH" /locus_tag="lmo2532" /experiment="EXISTENCE:[PMID:19448609]" /note="Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex" /codon_start=1 /transl_table=11 /product="ATP synthase F0F1 subunit delta" /protein_id="NP_466055.1" /db_xref="GeneID:986758" /translation="MSKDLEVAGRYANALFQVAQDKDLVDVFSEELTELKAALKANKD FVKLLENPTFTTEQKKNLASAVFEKINPTLRDFIYLLIDRSREDYLSVIADVYQKRVN DLRGVADADVYSVVPLSEQELTALSRVFATKMNKTKLNIQNHIDKSLLGGVKVVIGTR IYDDSLKTKLKDMERQIKA" misc_feature complement(2610059..2610595) /gene="atpH" /locus_tag="lmo2532" /note="F0F1 ATP synthase subunit delta; Validated; Region: PRK05758" /db_xref="CDD:235593" gene complement(2610592..2611104) /gene="atpF" /locus_tag="lmo2533" /db_xref="GeneID:987284" CDS complement(2610592..2611104) /gene="atpF" /locus_tag="lmo2533" /experiment="EXISTENCE:[PMID:19448609]" /note="Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel." /codon_start=1 /transl_table=11 /product="ATP synthase F0F1 subunit B" /protein_id="NP_466056.1" /db_xref="GeneID:987284" /translation="MLQPHLVIGSAFTFGDAFFTLFAFAILLVLIRIYAWKPLMGIMK EREEHIGSEIDAAEENRAQSEKLLAEQKSVLQQARVESQTMIENAKQLGEKEREEIVK TARRESERIKEEAKSDIAREKEDAISALREQVGSLSVLIASKVIEKNLDEKEQSNLIQ DYIERLGDDK" misc_feature complement(2610607..2611062) /gene="atpF" /locus_tag="lmo2533" /note="F0F1 ATP synthase subunit B; Validated; Region: PRK05759" /db_xref="CDD:180240" regulatory complement(2610602..2610607) /regulatory_class="ribosome_binding_site" /gene="atpF" /locus_tag="lmo2533" regulatory complement(2611114..2611119) /regulatory_class="ribosome_binding_site" gene complement(2611192..2611410) /gene="atpE" /locus_tag="lmo2534" /db_xref="GeneID:987281" CDS complement(2611192..2611410) /gene="atpE" /locus_tag="lmo2534" /EC_number="3.6.3.14" /experiment="EXISTENCE:[PMID:19448609]" /note="Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0" /codon_start=1 /transl_table=11 /product="ATP synthase F0F1 subunit C" /protein_id="NP_466057.1" /db_xref="GeneID:987281" /translation="MSLGVIAAAIAVGLGALGAGIGNGLIVSKTVEGVARQPEARSML QSIMFVGVALVEALPIIAVVIAFMVLNK" misc_feature complement(2611195..2611410) /gene="atpE" /locus_tag="lmo2534" /note="F0F1 ATP synthase subunit C; Validated; Region: PRK06876" /db_xref="CDD:180739" regulatory complement(2611419..2611424) /regulatory_class="ribosome_binding_site" gene complement(2611482..2612198) /gene="atpB" /locus_tag="lmo2535" /db_xref="GeneID:987279" CDS complement(2611482..2612198) /gene="atpB" /locus_tag="lmo2535" /EC_number="3.6.3.14" /experiment="EXISTENCE:[PMID:19448609]" /note="Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0" /codon_start=1 /transl_table=11 /product="ATP synthase F0F1 subunit A" /protein_id="NP_466058.1" /db_xref="GeneID:987279" /translation="MEEEFPTISLLGIDFNLSNILMITVTCVIVLLIAIICTRNLQRR PTGKQNFIEWVMDFVRGIINSNMDWKTGGRFHVLGITILMFVFVANMLGLPLQIAVND EVWWRSPTADPIVTLTLAIMVLGLTHYYGIKMRGFKHYFVGTYLSPMKFLFPLKLVEE FANTLTLGLRLYGNIFAGEVLLTIIATQLAHINIFVGVLAIIPAIIWQAFSLFIGAIQ AYIFTMLTMVYMSHKVSDEH" misc_feature complement(2611485..2612180) /gene="atpB" /locus_tag="lmo2535" /note="F0F1 ATP synthase subunit A; Validated; Region: PRK05815" /db_xref="CDD:235617" gene complement(2612205..2612603) /gene="atpI" /locus_tag="lmo2536" /db_xref="GeneID:986740" CDS complement(2612205..2612603) /gene="atpI" /locus_tag="lmo2536" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP synthase subunit I" /protein_id="NP_466059.1" /db_xref="GeneID:986740" /translation="MLESLIGMYHRHQKYMVLFIAICLCGWFLTPHIHIFLGLKLGLI VGWFNYWILMRRTQAMTRALAENRSFYGMGMTLRMGSVLLATIIATQLPEFFHVYSMV IGLGLAYAIIFLDFFAYSMYHRKKFLKREG" misc_feature complement(2612289..2612573) /gene="atpI" /locus_tag="lmo2536" /note="ATP synthase I chain; Region: ATP-synt_I; pfam03899" /db_xref="CDD:461086" regulatory complement(2612207..2612212) /regulatory_class="ribosome_binding_site" /gene="atpI" /locus_tag="lmo2536" regulatory complement(2612613..2612618) /regulatory_class="ribosome_binding_site" gene complement(2612797..2612967) /locus_tag="lmo2536a" /db_xref="GeneID:16695804" CDS complement(2612797..2612967) /locus_tag="lmo2536a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475642.1" /db_xref="GeneID:16695804" /translation="MITEVLVAVKWTKIILAWQSKKQIDFEIKKISEIIGYSFMDGSD CGTISNRCTHNL" gene complement(2613435..2614574) /locus_tag="lmo2537" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987487" CDS complement(2613435..2614574) /locus_tag="lmo2537" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine 2-epimerase" /protein_id="NP_466060.1" /db_xref="GeneID:987487" /translation="MAKIKVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITAQHR EMLDQVLEIFDIKPDIDLDIMKKGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTT SFAAGLATFYQQKMLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADIHFSPTKQAKENL LAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILENLGDNRLILMTAHRRENLGEPMQ GMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLR KSYLVFTDSGGVQEEAPGMGVPVLVLRDTTERPEGIEAGTLKLIGTNKENLIKEALDL LDNKESHDKMAQAANPYGDGFAANRILAAIKSHFEETDRPEDFIV" misc_feature complement(2613468..2614568) /locus_tag="lmo2537" /note="UDP-N-acetylglucosamine 2-epimerase [Cell wall/membrane/envelope biogenesis]; Region: WecB; COG0381" /db_xref="CDD:440150" regulatory complement(2614582..2614587) /regulatory_class="ribosome_binding_site" gene complement(2614692..2615321) /gene="upp" /locus_tag="lmo2538" /db_xref="GeneID:986484" CDS complement(2614692..2615321) /gene="upp" /locus_tag="lmo2538" /experiment="EXISTENCE:[PMID:19448609]" /note="Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate" /codon_start=1 /transl_table=11 /product="uracil phosphoribosyltransferase" /protein_id="NP_466061.1" /db_xref="GeneID:986484" /translation="MANVHVINHPLVQHKLTIIRDKNTGTKAFRELVDEVATLMAYEI TRDMELEDIQVETPLQTTTAKTLTGKKLGIVPILRAGLGMQDGILKLIPAAKVGHVGL YRDHDTLEPVEYFVKLPSDVEERLFIVVDPMLATGGSAIMAIDCLKKRGARNMKFMCL VAAPEGVKALQDAHPDVEIYVAGLDEKLDENGYIRPGLGDAGDRLFGTK" misc_feature complement(2614695..2615321) /gene="upp" /locus_tag="lmo2538" /note="uracil phosphoribosyltransferase; Reviewed; Region: upp; PRK00129" /db_xref="CDD:234653" misc_feature complement(order(2614833..2614835,2614905..2614919, 2614923..2614931,2615082..2615084,2615088..2615090)) /gene="upp" /locus_tag="lmo2538" /note="active site" /db_xref="CDD:206754" regulatory complement(2615332..2615337) /regulatory_class="ribosome_binding_site" regulatory complement(2615407..2615447) /regulatory_class="terminator" gene complement(2615458..2616699) /gene="glyA" /locus_tag="lmo2539" /db_xref="GeneID:986768" CDS complement(2615458..2616699) /gene="glyA" /locus_tag="lmo2539" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate" /codon_start=1 /transl_table=11 /product="serine hydroxymethyltransferase" /protein_id="NP_466062.1" /db_xref="GeneID:986768" /translation="MVYLQKQDKEVFDAIKLELGRQRANIELIASENFVSEQVMEAMG SVLTNKYAEGYPGKRYYGGCEFVDIVEDLARDRAKKLFGAEYANVQPHSGAQANMAVY HTVLEPGDTVLGMNLSHGGHLTHGSPVNFSGVLYNFVEYGVREDTKEIDYDIVREAAL KHKPKMIVAGASAYPRKIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHQNPVPYAD FTTTTTHKTLRGPRGGMILAKAEWEQKLNKSIFPGIQGGPLMHVIAAKAVAFGEALQP EFTTYCEQIIRNSKKLAETLQANDVAVLTGGSDNHLLLIDLKPLGLTGKAAEKVLDEV GITVNKNTIPFETESPFVTSGIRVGVAAVTTRGFDEVAIEKVGVLISEVLHNLENEEV LADVKARVATLTNEYPLYPSL" misc_feature complement(2615461..2616699) /gene="glyA" /locus_tag="lmo2539" /note="serine hydroxymethyltransferase; Reviewed; Region: glyA; PRK00011" /db_xref="CDD:234571" misc_feature complement(order(2615869..2615871,2615923..2615925, 2616295..2616300,2616403..2616405,2616424..2616426, 2616469..2616471,2616493..2616498,2616550..2616552, 2616604..2616606,2616619..2616621,2616646..2616651, 2616670..2616672,2616676..2616678)) /gene="glyA" /locus_tag="lmo2539" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:99733" misc_feature complement(order(2615629..2615631,2616004..2616006, 2616022..2616027,2616100..2616102,2616109..2616111, 2616184..2616186,2616334..2616336,2616415..2616420, 2616517..2616519,2616547..2616549,2616607..2616609)) /gene="glyA" /locus_tag="lmo2539" /note="glycine-pyridoxal phosphate binding site [chemical binding]; other site" /db_xref="CDD:99733" misc_feature complement(order(2615629..2615631,2616022..2616024, 2616334..2616336,2616607..2616609)) /gene="glyA" /locus_tag="lmo2539" /note="active site" /db_xref="CDD:99733" misc_feature complement(order(2615677..2615679,2615947..2615949, 2616331..2616333,2616337..2616339,2616349..2616351, 2616520..2616522,2616541..2616543)) /gene="glyA" /locus_tag="lmo2539" /note="folate binding site [chemical binding]; other site" /db_xref="CDD:99733" regulatory complement(2616710..2616715) /regulatory_class="ribosome_binding_site" gene complement(2616835..2617242) /locus_tag="lmo2540" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987277" CDS complement(2616835..2617242) /locus_tag="lmo2540" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphatase" /protein_id="NP_466063.1" /db_xref="GeneID:987277" /translation="MNVLFVCTGNTCRSPLAEKILQNLRPDLDVRSAGTRALNGDAIS ENSRQILAQMNLPTTHQAKKITEADIDWADQIYVMTQNHQAELKSLFPKENDKIQLIS EEKTDIPDPYGGSIEQYEITYYELKSAISERFL" misc_feature complement(2616847..2617242) /locus_tag="lmo2540" /note="low molecular weight protein arginine phosphatase; Region: LMWPAP; cd16344" /db_xref="CDD:319972" misc_feature complement(order(2616907..2616909,2616913..2616915, 2617201..2617218,2617222..2617224)) /locus_tag="lmo2540" /note="active site" /db_xref="CDD:319972" gene complement(2617239..2618276) /locus_tag="lmo2541" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986761" CDS complement(2617239..2618276) /locus_tag="lmo2541" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="tRNA threonylcarbamoyladenosine biosynthesis protein" /protein_id="NP_466064.1" /db_xref="GeneID:986761" /translation="MQTIHWNINKQQSNQAIFQEAAKLLQGGECVAFPTETVYGLGAD ATNQAAVQKIYEAKGRPSDNPLIVHIARREQMDQFVASYPAKAIQLMEKFWPGPLTVI LPLKKDSLATNVSAGLSTVGVRMPEHPVSLALIGTANIPIAAPSANRSGKPSPTTASH VIEDLDGKIAGIIDGGATGVGLESTVIDCSLEIPIILRPGGVTKEQIEQIIGPVDIST NNTKETEKPKAPGMKYTHYAPKAPVYLIEGSTQFWQSEINKAEAANKKLGILATKELI NQLNTSGTIETTGSIKALDEIATSLYKGLRAFDHADVDIIFAEVYPETELGAAIMNRL EKAAGNRRITE" misc_feature complement(2617644..2618237) /locus_tag="lmo2541" /note="tRNA A37 threonylcarbamoyladenosine synthetase subunit TsaC/SUA5/YrdC [Translation, ribosomal structure and biogenesis]; Region: TsaC; COG0009" /db_xref="CDD:439780" misc_feature complement(2617260..2617670) /locus_tag="lmo2541" /note="Threonylcarbamoyl-AMP synthase, C-terminal domain; Region: Sua5_C; pfam03481" /db_xref="CDD:460941" regulatory complement(2617251..2617256) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2541" regulatory complement(2618286..2618291) /regulatory_class="ribosome_binding_site" regulatory complement(2618542..2618575) /regulatory_class="terminator" gene complement(2618577..2619428) /locus_tag="lmo2542" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986635" CDS complement(2618577..2619428) /locus_tag="lmo2542" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="protoporphyrinogen oxidase" /protein_id="NP_466065.1" /db_xref="GeneID:986635" /translation="MTQISQLLKKAEAILFEKGLDQNAAEILLETRMGLSRSELWMEI SRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPRPETEELVAC AEAFLKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTASDISAPALVVARKNALLLNA DVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEPSLALFAENDGL AIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHTTVVIHKDINSKDRYV TCSNILV" misc_feature complement(2618589..2619428) /locus_tag="lmo2542" /note="N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional; Region: PRK09328" /db_xref="CDD:236467" misc_feature complement(order(2618871..2618873,2618922..2618930, 2619000..2619005,2619057..2619077)) /locus_tag="lmo2542" /note="S-adenosylmethionine binding site [chemical binding]; other site" /db_xref="CDD:100107" gene complement(2619415..2620491) /gene="prfA" /locus_tag="lmo2543" /db_xref="GeneID:986736" CDS complement(2619415..2620491) /gene="prfA" /locus_tag="lmo2543" /experiment="EXISTENCE:[PMID:19448609]" /note="recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1" /codon_start=1 /transl_table=11 /product="peptide chain release factor 1" /protein_id="NP_466066.1" /db_xref="GeneID:986736" /translation="MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITAT VETYREYKNVNEQINETKELLGEKLDDEMREMAKEEFAELQKEKTDLEERLKLLLVPK DPNDDKNVILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKE IIAMMNGNDAFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDK DIRTDTFASTGAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARV YDKFEREAREEYDANRKSAVGTGDRSERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGK LDEIIDALILEDQTSKLEHLNDAN" misc_feature complement(2619427..2620491) /gene="prfA" /locus_tag="lmo2543" /note="Protein chain release factor RF1 [Translation, ribosomal structure and biogenesis]; Region: PrfA; COG0216" /db_xref="CDD:439986" regulatory complement(2619435..2619440) /regulatory_class="ribosome_binding_site" /gene="prfA" /locus_tag="lmo2543" regulatory complement(2620501..2620506) /regulatory_class="ribosome_binding_site" gene complement(2620514..2621089) /locus_tag="lmo2544" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986601" CDS complement(2620514..2621089) /locus_tag="lmo2544" /EC_number="2.7.1.21" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of thymidine 5'-phosphate from thymidine" /codon_start=1 /transl_table=11 /product="thymidine kinase" /protein_id="NP_466067.1" /db_xref="GeneID:986601" /translation="MAQLFFRYGSMNSGKTIEILKVAHNYEEQNKTVAIFTSGIDDRD QVGFISSRIGLKREATPIFSDTNIFEIVVNIKPKPNCVLLDESQFLEKEHVFQLAKIV DELNIPVIAYGLKNDFRNELFEGSKYLLLYADKLEEMKTICWFCAKKATMVLRVDDKG KPVYTGEQIMIGGNDHYYPVCRKCHANPPIK" misc_feature complement(2620523..2621089) /locus_tag="lmo2544" /note="thymidine kinase; Provisional; Region: PRK04296" /db_xref="CDD:235272" regulatory complement(2621098..2621103) /regulatory_class="ribosome_binding_site" regulatory complement(2621161..2621194) /regulatory_class="terminator" gene complement(2621201..2622067) /gene="thrB" /locus_tag="lmo2545" /db_xref="GeneID:984754" CDS complement(2621201..2622067) /gene="thrB" /locus_tag="lmo2545" /EC_number="2.7.1.39" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate" /codon_start=1 /transl_table=11 /product="homoserine kinase" /protein_id="NP_466068.1" /db_xref="GeneID:984754" /translation="MRIRVPATTANLGPGFDSCGLALTLYLTLDIGAEADSWYIEHNI GGGIPHDETNVIIETALNLAPNLTPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLA ELNLSKEEKVRIAAEIEGHPDNVAPAVLGNWVVGAKLDGEDFYVRHLFPDCALIAFIP KAELLTSESRGVLPDTLPFKEAVQASSIANVMIAAILRNDMTLAGEMMERDLWHEKYR SQLVPHLAQIRDVAKNQGAYAACLSGAGPTVLVFAPRNLANKLQTSLQTLEIDADVLL LDVEGSGAEVFR" misc_feature complement(2621210..2622067) /gene="thrB" /locus_tag="lmo2545" /note="homoserine kinase; Provisional; Region: PRK01212" /db_xref="CDD:234920" gene complement(2622067..2623122) /gene="thrC" /locus_tag="lmo2546" /db_xref="GeneID:986503" CDS complement(2622067..2623122) /gene="thrC" /locus_tag="lmo2546" /EC_number="4.2.3.1" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of L-threonine from O-phospho-L-homoserine" /codon_start=1 /transl_table=11 /product="threonine synthase" /protein_id="NP_466069.1" /db_xref="GeneID:986503" /translation="MYKGLLEKYKEYLPVTDKTPMISLAEGNTPLIPLPNLSKELGVT LYGKYEGLNPTGSFKDRGMVMAVAKAKEEGAEAVICASTGNTSAAAAAYATRAGLKAY IVIPEGKVALGKLAQAVMYGADIISIQGNFDEALKSVRELAETEAVTLVNSVNPYRLE GQKTAAFEICEQLGSAPDVLAIPVGNAGNISAYWKGFKEWNEAKASGLPRMHGFEAEG AAAIVQGKPIDNPETIATAIRIGNPASWGLAEAARDESGGYIHSVTDDEIVNAYKKIA AQDGVFIEPGSAASLAGVIQHVANGTIKKGETVVCVFTGNGLKDPDTAMSVHEIPISH VDDIEAMRTHLRSGVKA" misc_feature complement(2622163..2623107) /gene="thrC" /locus_tag="lmo2546" /note="Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants; Region: Thr-synth_1; cd01563" /db_xref="CDD:107206" misc_feature complement(order(2622175..2622177,2622280..2622285, 2622289..2622297,2622607..2622609,2622697..2622702, 2622736..2622744,2622748..2622768,2622817..2622819, 2622835..2622840,2622847..2622849,2622895..2622897, 2622964..2622966,2623030..2623035,2623048..2623050)) /gene="thrC" /locus_tag="lmo2546" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:107206" misc_feature complement(order(2622181..2622183,2622556..2622570, 2622868..2622870,2622946..2622948)) /gene="thrC" /locus_tag="lmo2546" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:107206" misc_feature complement(2622946..2622948) /gene="thrC" /locus_tag="lmo2546" /note="catalytic residue [active]" /db_xref="CDD:107206" regulatory complement(2622077..2622082) /regulatory_class="ribosome_binding_site" /gene="thrC" /locus_tag="lmo2546" gene complement(2623125..2624411) /gene="hom" /locus_tag="lmo2547" /db_xref="GeneID:987269" CDS complement(2623125..2624411) /gene="hom" /locus_tag="lmo2547" /EC_number="1.1.1.3" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine" /codon_start=1 /transl_table=11 /product="homoserine dehydrogenase" /protein_id="NP_466070.1" /db_xref="GeneID:987269" /translation="MEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYNISVKKVL VRDLEKNRRYETKGFELTTNPSDVLDDPEIAVVVEVMGSITTAREYILQALKAGKHVV TANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVN GTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMN VNLDNVETNGIRGISPEDIEVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLA GVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSY KHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATV VIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG" misc_feature complement(2623131..2624402) /gene="hom" /locus_tag="lmo2547" /note="homoserine dehydrogenase; Provisional; Region: PRK06349" /db_xref="CDD:235783" regulatory complement(2623130..2623135) /regulatory_class="ribosome_binding_site" /gene="hom" /locus_tag="lmo2547" regulatory complement(2624419..2624424) /regulatory_class="ribosome_binding_site" regulatory complement(2624570..2624604) /regulatory_class="terminator" gene complement(2624633..2624878) /gene="rpmE2" /locus_tag="lmo2548" /db_xref="GeneID:987268" CDS complement(2624633..2624878) /gene="rpmE2" /locus_tag="lmo2548" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L31" /protein_id="NP_466071.1" /db_xref="GeneID:987268" /translation="MKTGIHPEYRPVVFVDTSTDFKFLSGSTKSSSETIKWEDGNEYP LLRVEISSDSHPFYTGKQKHATADGRVDRFNKKYGLK" misc_feature complement(2624636..2624878) /gene="rpmE2" /locus_tag="lmo2548" /note="type B 50S ribosomal protein L31; Region: rpmE2; PRK01678" /db_xref="CDD:234969" regulatory complement(2624888..2624893) /regulatory_class="ribosome_binding_site" gene complement(2624980..2625417) /gene="gtcA" /locus_tag="lmo2549" /db_xref="GeneID:984958" CDS complement(2624980..2625417) /gene="gtcA" /locus_tag="lmo2549" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="wall teichoic acid glycosylation protein GtcA" /protein_id="NP_466072.1" /db_xref="GeneID:984958" /translation="MNKIRKWLDKIPWYTDEIHSILMYLIMGGFTTLINIVTFWLCTY VLNWDYRIANTIAWVASVLFAYFSNKKYVFESYTPTWKERAREVTSFFGFRFLTYLVD ILVMILLIEVLSINELWAKIWTNVIVLVLNYVFSKWIIFKVKK" misc_feature complement(2624983..2625366) /gene="gtcA" /locus_tag="lmo2549" /note="Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose) [Lipid transport and metabolism]; Region: GtrA; COG2246" /db_xref="CDD:441847" gene complement(2625414..2626361) /locus_tag="lmo2550" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987266" CDS complement(2625414..2626361) /locus_tag="lmo2550" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glycosyl transferase" /protein_id="NP_466073.1" /db_xref="GeneID:987266" /translation="MKLITISVPAYNEQESITTLYETIVNVMDSIKDKYTFELLFIND GSKDKTLEIVKQLHKEDNRVGFVDLSRNYGKEIAMAAGFDYAKGDAVITMDADLQHPP ELIKEMIELWELGYEDVYARRNKRHGESWLKKATSKWYYKTLQKVTKTPVLPDTGDFR LLDRRCVDALKKLRETQRYTKGLYNWIGFKKVEVTFDAAPRHAGETKWNYRSLINLAL EGITSYTTLPLRLSTIAGFAISLGTFIYLIYIVIKTLIVGSDVSGFPTLMITILFLGG IQLISIGIIGEYLGRIFNEVKKRPLYFVEEYNGEKEDIV" misc_feature complement(2625795..2626346) /locus_tag="lmo2550" /note="Bacterial DPM1_like enzymes are related to eukaryotic DPM1; Region: DPM1_like_bac; cd04187" /db_xref="CDD:133030" misc_feature complement(order(2626071..2626073,2626329..2626331, 2626335..2626337)) /locus_tag="lmo2550" /note="Ligand binding site [active]" /db_xref="CDD:133030" misc_feature complement(order(2626071..2626076,2626230..2626232)) /locus_tag="lmo2550" /note="Putative Catalytic site [active]" /db_xref="CDD:133030" misc_feature complement(2626071..2626079) /locus_tag="lmo2550" /note="DXD motif [active]" /db_xref="CDD:133030" regulatory complement(2625425..2625431) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2550" regulatory complement(2626371..2626376) /regulatory_class="ribosome_binding_site" gene complement(2626442..2627713) /gene="rho" /locus_tag="lmo2551" /db_xref="GeneID:987264" CDS complement(2626442..2627713) /gene="rho" /locus_tag="lmo2551" /experiment="EXISTENCE:[PMID:19448609]" /note="An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes" /codon_start=1 /transl_table=11 /product="transcription termination factor Rho" /protein_id="NP_466074.1" /db_xref="GeneID:987264" /translation="MAKLSIAYLESLTIKDIYSLAKEHKIAYYSKLTKRELIFALLKS NAEKEGFFFMEGVLEIIPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDRVSGK VRPPKENERYFGLLHVEAVNGENPEVAKERVHFPGLTPLYPDRQIHLETEKYPISTRT IDLIAPIGFGQRGLIVAPPKAGKTVLLKEIANAITTNHPDTELIVLLIDERPEEVTDI ERSVKADVVSSTFDEVPENHIKVAELVLERAMRLVEQKRDVVILMDSITRLARAYNLV IPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEF KGTGNMELHLDRQLAERRVFPAIDMRRSGTRKEELLLSKERLEQLWKIRKAMPKQGDG LDISERFVRYLKKTDNNEAFYELLQEEMFKK" misc_feature complement(2626460..2627704) /gene="rho" /locus_tag="lmo2551" /note="transcription termination factor Rho; Provisional; Region: rho; PRK09376" /db_xref="CDD:236490" regulatory complement(2627720..2627725) /regulatory_class="ribosome_binding_site" gene complement(2627816..2629087) /gene="murZ" /locus_tag="lmo2552" /db_xref="GeneID:987263" CDS complement(2627816..2629087) /gene="murZ" /locus_tag="lmo2552" /EC_number="2.5.1.7" /experiment="EXISTENCE:[PMID:19448609]" /note="adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /protein_id="NP_466075.1" /db_xref="GeneID:987263" /translation="MTDRLIIQGGKKLSGTLQVDGAKNSAVALIPAAILAESEVVLEG LPDISDVYTLYDILEELGGSVRYDNKTAIIDPTDMLSMPLPSGNVKKLRASYYLMGAM LGRFKKAVIGLPGGCYLGPRPIDQHIKGFEALGAKVTNEQGAIYLRADELKGARIYLD VVSVGATINIMLAAVRAKGKTVIENAAKEPEIIDVATLLTNMGAIIKGAGTDTIRITG VDHLHGCHHTIIPDRIEAGTFMVLAAASGKGIRIENVIPTHLEGIIAKLTEMGVPMDI EEDSIFIGEVENIKKVDIKTYAYPGFPTDLQQPLTALLTRAEGSSVITDTIYPSRFKH IAELERMGGKFKLEGRSAVISGPAKLQGSKVTATDLRAGAALVIAGLLAEGRTEIHGV EHIERGYSKIIEKLSAIGADITRSSTAETNI" misc_feature complement(2627843..2629081) /gene="murZ" /locus_tag="lmo2552" /note="UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed; Region: PRK12830" /db_xref="CDD:183779" misc_feature complement(order(2628392..2628403,2629022..2629033)) /gene="murZ" /locus_tag="lmo2552" /note="hinge; other site" /db_xref="CDD:238796" misc_feature complement(order(2628173..2628175,2628593..2628598, 2628605..2628607,2628707..2628724,2628797..2628799, 2628809..2628811,2629016..2629018)) /gene="murZ" /locus_tag="lmo2552" /note="active site" /db_xref="CDD:238796" regulatory complement(2629095..2629100) /regulatory_class="ribosome_binding_site" regulatory complement(2629165..2629198) /regulatory_class="terminator" gene complement(2629208..2630278) /locus_tag="lmo2553" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987259" CDS complement(2629208..2630278) /locus_tag="lmo2553" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466076.1" /db_xref="GeneID:987259" /translation="MSGGAKKNLFNIAIVLAISIGFIIWQFQGVDISTFFASMLKVNP WWLLAAFAAMFIYWFLEAVVLQTASKPANKDQRFFSSFRITMIGQFFNTITPMATGGQ PAQLVMLTKQGMDAGRGSSVLLVKFIIYQAMVVLNFLVILIFGIHYLMTGVTQLKFLV LLGFGVHVIVIAALILVGRSQKFTTKLVHILLIPTRLFMKKEKVSNLRNTLDEKIITF HEESSRIGKDWKLIVRCCFYTTLQLWIYFSIPFFILQAIGVTGIGLYMAITYHAFIIM FATVMPTPGGAGGAEYTFTLLFGMLLGPAKLLMALVLWRIITYYSCIVFGAGALLIKD TASQKIKPRIEALAKTPAKNLP" misc_feature complement(2629283..2630164) /locus_tag="lmo2553" /note="Predicted membrane flippase AglD2/YbhN, UPF0104 family [Cell wall/membrane/envelope biogenesis]; Region: AglD2; COG0392" /db_xref="CDD:440161" gene complement(2630285..2631310) /locus_tag="lmo2554" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987257" CDS complement(2630285..2631310) /locus_tag="lmo2554" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="galactosyltransferase" /protein_id="NP_466077.1" /db_xref="GeneID:987257" /translation="MIKLTMLSSAEKVKGQGVASAYRELVNLLEERYKNEIDMKINSF EKSDITHYHTVDFRFFLSTFFKKKRGVRVGYVHFLPETMEGSLKLPWIARVVFYKYLI GFYKRMDEIVVVNPSFIPKLTAYNIPEEKIHYIPNFVSKKSFFPISKTEKELAREKYG IPADKFTVIGIGQVQHRKGVLDFIEVAKQLPDVQFVWAGGFSFGKITSGYEELKKIYD NPPNNVNFIGIVDRSEMNTCINMADVFFMPSYNELFPMAILEAMSSDVPILLRNLDLY EEILDGYYVKEVDNPGFIRAIERLENDTNYYNEMLQAAKRGAAYYSEDRLAEIWLGFY QGLLTKE" misc_feature complement(2630306..>2631190) /locus_tag="lmo2554" /note="phosphatidyl-myo-inositol mannosyltransferase; Region: GT4_PimA-like; cd03801" /db_xref="CDD:340831" regulatory complement(2630287..2630292) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2554" gene complement(2631303..2632586) /locus_tag="lmo2555" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986734" CDS complement(2631303..2632586) /locus_tag="lmo2555" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="N-acetylglucosaminyl-phosphatidylinositol biosynthesis protein" /protein_id="NP_466078.1" /db_xref="GeneID:986734" /translation="MNIGIFTDTYSPQISGVATSIMIMENELRKQGHTVYIFTTTDPN ADRESEEGRVFRLPSIPFVFFPERRVAIAGMNKFIKLVGRLDLDIIHTHTEFSLGLLG KRIAKKYHIPSIHTYHTMYVDYLHYIAKGKILTPSMVGKMTKSFCDSYDAIITPTAKV RHHLEEQGIHKLMYTVPTGTDISSFAPVEKQRILDLKKLLGIGENDPVILSLGRIAHE KNIDAIINAMPEVLQTKTTAKLVIVGDGPVRKDLEKLVEEKQLADHVIFTGAVDWENI SLYYQLGDLFVSASTTETQGLTYAEAMAASLPVVAKRDESIEGFLSDRETAFLFNEDD ELASLLINILSDKNTATLVATNGRVKVESISADQFGINIESTYNEVREIYRVKRQNGT IKVKPTLIKSKIASQVFSLSSSTHVQRKERSSRRD" misc_feature complement(2631447..2632583) /locus_tag="lmo2555" /note="UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins; Region: GT4_UGDG-like; cd03817" /db_xref="CDD:340844" misc_feature complement(order(2631693..2631695,2631762..2631764, 2631945..2631953,2632539..2632541)) /locus_tag="lmo2555" /note="putative ADP-binding pocket [chemical binding]; other site" /db_xref="CDD:340844" regulatory complement(2631321..2631326) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2555" regulatory complement(2632595..2632600) /regulatory_class="ribosome_binding_site" regulatory complement(2632836..2632881) /regulatory_class="terminator" gene complement(2632907..2633761) /gene="fbaA" /locus_tag="lmo2556" /db_xref="GeneID:986313" CDS complement(2632907..2633761) /gene="fbaA" /locus_tag="lmo2556" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="fructose-1,6-bisphosphate aldolase" /protein_id="NP_466079.1" /db_xref="GeneID:986313" /translation="MPIVNMTDMLKKALAGKYAVGQFNINNLEWTQAILKAAEAEKAP VILGVSEGAAKYMGGFKTVVKMTEGLVEDLKITVPVAIHLDHGSSFDSCKAAIDAGFS SVMIDGSHHPIDENIAMTKQVVDYAHAKGVSVEAEIGTVGGDEDGVTGGINYADPQEC LRVVKEANIDALAAALGSVHGPYHGEPVLGFDEMKEISELTGAPLVLHGGSGIPEHQI KKAIELGHSKINVNTECQIVWTAAVREKLATDDKVYDPRKVIGPGVDAIIKTVTEKIQ EFGSNGKA" misc_feature complement(2632910..2633761) /gene="fbaA" /locus_tag="lmo2556" /note="A large family of domains similar to triose phosphate isomerase (TIM) which, in general, share an eight beta/alpha closed barrel structure; Region: TIM-like beta/alpha barrel domains; cl21457" /db_xref="CDD:473867" misc_feature complement(order(2633021..2633023,2633030..2633032, 2633042..2633044,2633051..2633056,2633060..2633065, 2633327..2633329,2633552..2633557,2633564..2633566, 2633576..2633578,2633591..2633599,2633606..2633608, 2633666..2633668,2633675..2633683)) /gene="fbaA" /locus_tag="lmo2556" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:238477" misc_feature complement(order(2633063..2633068,2633072..2633074, 2633129..2633131,2633135..2633140,2633213..2633215, 2633219..2633227,2633504..2633509)) /gene="fbaA" /locus_tag="lmo2556" /note="active site" /db_xref="CDD:238477" misc_feature complement(order(2633138..2633140,2633222..2633224, 2633504..2633506)) /gene="fbaA" /locus_tag="lmo2556" /note="zinc binding site [ion binding]; other site" /db_xref="CDD:238477" misc_feature complement(order(2633129..2633131,2633135..2633137, 2633213..2633215,2633219..2633221,2633225..2633227)) /gene="fbaA" /locus_tag="lmo2556" /note="Na+ binding site [ion binding]; other site" /db_xref="CDD:238477" regulatory complement(2633772..2633777) /regulatory_class="ribosome_binding_site" gene complement(2633930..2634850) /locus_tag="lmo2557" /db_xref="GeneID:987255" CDS complement(2633930..2634850) /locus_tag="lmo2557" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="lipid kinase" /protein_id="NP_466080.1" /db_xref="GeneID:987255" /translation="MQKKAMIIYNPAAGKNKFRKLLPDAEKILTEANFEVTLVPSTPA PKSTTFIAKQAAEAGFEVVIAAGGDGTVNEVVNGLMQVDTPPKLGVLPVGTTNDYARA LNFAKDPLEALRIIAKQETIRVDIGKANETEFFINNAAGGKITEITYAVKESMKSKWG RLAYLFSGLTVLPKLSPVYVEIAYNDEIFKGKILLFFVNKSNSVGGMETLCPPAELNS GMFELLILKKVSPKKLFQLFASIKKGTHLSSPHVIHARTNKVTINSDADLNVSYDGVY GGKAPYTLEVIPEALEVFADKNRISSRLRG" misc_feature complement(2633933..2634850) /locus_tag="lmo2557" /note="putative lipid kinase; Reviewed; Region: PRK13055" /db_xref="CDD:237282" regulatory complement(2634858..2634863) /regulatory_class="ribosome_binding_site" regulatory 2635152..2635157 /regulatory_class="ribosome_binding_site" gene 2635167..2637920 /gene="ami" /locus_tag="lmo2558" /db_xref="GeneID:987254" CDS 2635167..2637920 /gene="ami" /locus_tag="lmo2558" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="autolysin, amidase" /protein_id="NP_466081.1" /db_xref="GeneID:987254" /translation="MKKLVKSAVVFASLVFIGTSATMITEKASAASIDPVQKVDGQAT YIPKGVRDGTATEEHDGFEDGTNSVLQQVPLLRATTGYPDVNAYIKSNKFSTAKIEKQ LKSQFPKFNYRNGYGKPEGIVIHETANNSSTITGEINYMSTNYNNAFVHAFVDKSRII QIHPTENGVWGAGQYANARFIQVELVRSKTFDEFARSINNYAYYAAYLLDQYNLPVDS AHSDGKGTVWSHDAVTRYLGGTTHTDPVAYFNQWGYNFNNFVSLINEKYKAMQVNYEK IEYDKAITAYSRVKTATGNSVWTKPNKTEGAKLVNPLSSYSGKNLRIIREAKTSGGTI WYQFSIGGKTIGWVDSKALNTFYTPSMEKTITGTRYVLPSKQTVHYYGLPVEDSAIDR GPLSKFNGQALTLQREATIEGQLWYRVKDLGWVKAANLTTTKYDLIEYDKAITAYSRV KTAAGNYVWSKPNKTEGAKQGSALSTYSGKNMRIIREAKTSSGTIWYQFSIDGKTIGW VDTKALNTFYTPSMEKNLTATRYVAPGQETQHYYGLPVADSAIDRGPLSKFAGQTLTV QREATIEGQLWYRVKDLGWTKASTLTATQYDKLEYDKAITAYSRVKTATGNSVWTKPY RTSGYKLVNPLSSYAGKNLRIIREAKTSSGIWYQFSIGGKTIGWVDSKALNTFYTPSM EKTITGTRYVLPSKQTVHYYGLPVEDSAIDRGPLSKFNGQALTLQREATIEGQLWYRV KDLGWVKAANLTTTKFDTLSYDKAITAYSRVKTATGNSVWTKPNKIEGAQKISALSTY SGKNMRILREAKTSSGTIWYQFSVGGKTIGWVETKALNTFYTPSMEKNLTATRYVLTS KKNEHYYGLPVVDSAIDRGPLSKFSGKTLTVQREATIEGQLWYRVKDLGWTKAANLSA KKQ" misc_feature 2635497..2636048 /gene="ami" /locus_tag="lmo2558" /note="N-acetylmuramoyl-L-alanine amidase CwlA [Cell wall/membrane/envelope biogenesis]; Region: CwlA; COG5632" /db_xref="CDD:444359" misc_feature 2635989..2636234 /gene="ami" /locus_tag="lmo2558" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 2636235..2636465 /gene="ami" /locus_tag="lmo2558" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 2636472..2636717 /gene="ami" /locus_tag="lmo2558" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 2636718..2636948 /gene="ami" /locus_tag="lmo2558" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 2636955..2637197 /gene="ami" /locus_tag="lmo2558" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 2637198..2637428 /gene="ami" /locus_tag="lmo2558" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 2637435..2637680 /gene="ami" /locus_tag="lmo2558" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 2637681..2637911 /gene="ami" /locus_tag="lmo2558" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" regulatory complement(2637917..2637951) /regulatory_class="terminator" regulatory 2637928..2637962 /regulatory_class="terminator" gene complement(2637964..2639562) /gene="pyrG" /locus_tag="lmo2559" /db_xref="GeneID:987251" CDS complement(2637964..2639562) /gene="pyrG" /locus_tag="lmo2559" /EC_number="6.3.4.2" /experiment="EXISTENCE:[PMID:19448609]" /note="CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer" /codon_start=1 /transl_table=11 /product="CTP synthetase" /protein_id="NP_466082.1" /db_xref="GeneID:987251" /translation="MTKYIFVTGGVVSSIGKGITAASLGRLLKNRGLSVTIQKFDPYI NVDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFIDINLNKYSNVTTGKVYSEVIKKE RRGDYLGGTVQVIPHITNELKDRVFRAARMTNSDIIITEIGGTVGDIESLPFLEAIRQ IKGDVGAENVLYIHTTLIPYIKAAGEMKTKPTQHSVKELRSLGIQPNIIVVRTEQPVS QEMKDKIALFCDIKASEVIESRDEETLYNVPLSLQKQKMDDIVLEHLQLEAPQAEMTD WKNLVHRVKNLSKKVRIGLVGKYVSLQDAYLSVAEALRHAGYDHDAEIEIDWIDSEKV TKENVAEIMKDVDGILVPGGFGDRAIEGKIAAIEYARVNKVPYFGICLGMQLATVEFA RNVLGLEGAHSAEIEPETNHNIIDLLPEQKNIENMGGTLRLGLYPARIKQGTKAEAAY GTTLVEERHRHRYEFNNEYREQMEEAGMIVSATSPDGRLVEVVELIDHPWFVACQYHP EFISRPNRPQSLFKDFVGAALKNK" misc_feature complement(2637967..2639559) /gene="pyrG" /locus_tag="lmo2559" /note="CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism]; Region: PyrG; COG0504" /db_xref="CDD:440270" regulatory complement(2639576..2639581) /regulatory_class="ribosome_binding_site" regulatory complement(2639863..2639915) /regulatory_class="terminator" gene complement(2639930..2640466) /locus_tag="lmo2560" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987250" CDS complement(2639930..2640466) /locus_tag="lmo2560" /experiment="EXISTENCE:[PMID:19448609]" /note="participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit delta" /protein_id="NP_466083.1" /db_xref="GeneID:987250" /translation="MDLKNLTQEERSELSLIDVAHFILEQRKETILFPELVKEIQAFL GLKDAEIRERLVQFYTDMNIDGNFISLGNNTWGLRAWYPMDAIDEEVQTQTTPKKKRK SDDDEDEDEEILDDDVDYDDEEIVEELGEEEISLADVLLDEDEDDDDHLPDGIEGDLA TVEDDYTDGDYTEDPEDK" misc_feature complement(2640191..2640460) /locus_tag="lmo2560" /note="DNA-directed RNA polymerase, delta subunit [Transcription]; Region: RpoE; COG3343" /db_xref="CDD:442572" regulatory complement(2640475..2640480) /regulatory_class="ribosome_binding_site" gene complement(2640832..2642502) /gene="argS" /locus_tag="lmo2561" /db_xref="GeneID:984764" CDS complement(2640832..2642502) /gene="argS" /locus_tag="lmo2561" /EC_number="6.1.1.19" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="arginyl-tRNA synthetase" /protein_id="NP_466084.1" /db_xref="GeneID:984764" /translation="MNVMQENQIKLIEHIKQAVVQAVGLEETEVPEILLEVPKDKKHG DYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTD LVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAG FDVSREYYINDAGNQINNLVLSAEARYFEALGLESEFPEDGYRGADIISLGKDLAAKY GDKYVHTSEEERRSIFRVDALAFETGKLRADLEEFRVSFDEWFSETSLYEENKVLPAL ERLRENGYIYEQDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDV LIDIWGADHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVT MRDLIEEVGLDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRS GKEQGLEVTKDADMSLLQTEAEYDLLKVLGEFADVVAEAAAKRAPHRIVRYLNDLASA FHRFYNSNKVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM" misc_feature complement(2640835..2642475) /gene="argS" /locus_tag="lmo2561" /note="Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: ArgS; COG0018" /db_xref="CDD:439789" gene complement(2642499..2642948) /locus_tag="lmo2562" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987249" CDS complement(2642499..2642948) /locus_tag="lmo2562" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2562" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466085.1" /db_xref="GeneID:987249" /translation="MTANQMERKKVTIHITNVIRQMDAEEKSDMSVSGVFYRDKGNRY LHYEEKQLAGTIRTVLKIADNELLLMRSGAVNMRMHFFRDNRRSTASVDSGAGKLQLE SELVSMEELYENKPDVLSEVAFQYDLLSHGEYIGSYTVLMKIEEDAE" misc_feature complement(2642514..2642927) /locus_tag="lmo2562" /note="Uncharacterized beta-barrel protein YwiB, DUF1934 family [Function unknown]; Region: YwiB; COG4506" /db_xref="CDD:443587" regulatory complement(2642510..2642515) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2562" regulatory complement(2642960..2642965) /regulatory_class="ribosome_binding_site" gene complement(2643026..2643679) /locus_tag="lmo2563" /db_xref="GeneID:987248" CDS complement(2643026..2643679) /locus_tag="lmo2563" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466086.1" /db_xref="GeneID:987248" /translation="MPSFLAYPLEMIPYVLVTLLIAFTIHEWAHALVALAFGDDTAKN EGRLSLNPMVHIDLFGLLMILIAGFGWAKPTPVNRFKLKKRRLGSILVSLAGPVSNLL LAMVGVGFYALFLNYSFFTYGSVAETFLMIFVQLNLVLFVFNLIPLPPLDGYQILVEF LPMSTRSKLEPLERYAMLIFLVVALTPISAFTIQPIFNTVIPFVLNVILTIFGLTSF" misc_feature complement(2643116..2643646) /locus_tag="lmo2563" /note="Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the...; Region: S2P-M50_like_1; cd06158" /db_xref="CDD:100079" misc_feature complement(order(2643224..2643226,2643248..2643250, 2643590..2643592,2643599..2643604)) /locus_tag="lmo2563" /note="active site" /db_xref="CDD:100079" misc_feature complement(2643239..2643250) /locus_tag="lmo2563" /note="putative substrate binding region [chemical binding]; other site" /db_xref="CDD:100079" regulatory complement(2643685..2643690) /regulatory_class="ribosome_binding_site" regulatory 2643740..2643745 /regulatory_class="ribosome_binding_site" gene 2643753..2643938 /locus_tag="lmo2564" /db_xref="GeneID:987247" CDS 2643753..2643938 /locus_tag="lmo2564" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="4-oxalocrotonate isomerase" /protein_id="NP_466087.1" /db_xref="GeneID:987247" /translation="MPFVTIQFLEGRTDDQKKALVSEVTEVVSKNLKAPKENIHVILE EMKKTDYGVGGVRKSDI" misc_feature 2643753..2643932 /locus_tag="lmo2564" /note="4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one...; Region: 4Oxalocrotonate_Tautomerase; cl00235" /db_xref="CDD:444774" misc_feature order(2643756..2643761,2643864..2643866) /locus_tag="lmo2564" /note="active site 1 [active]" /db_xref="CDD:238274" misc_feature order(2643756..2643776,2643810..2643812,2643819..2643824, 2643831..2643833,2643843..2643848) /locus_tag="lmo2564" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238274" misc_feature order(2643765..2643767,2643771..2643773,2643801..2643806, 2643813..2643818,2643825..2643827,2643858..2643863, 2643867..2643881,2643885..2643890,2643897..2643923) /locus_tag="lmo2564" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:238274" misc_feature order(2643771..2643773,2643903..2643905) /locus_tag="lmo2564" /note="active site 2 [active]" /db_xref="CDD:238274" regulatory 2643950..2643979 /regulatory_class="terminator" gene complement(2643973..2645295) /locus_tag="lmo2565" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984565" CDS complement(2643973..2645295) /locus_tag="lmo2565" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466088.1" /db_xref="GeneID:984565" /translation="MSYLTEKLREEKVFKDPVHGYVHVSDKIVWDLIATKEFQRLRRI HQLGTTSLTFHGAEHSRFNHSLGVYEIVRQIIDVTFANEPQLNPEERMVALCAALLHD LGHGPFSHAFEKVFGTDHEAYTQEIIIGDTEVSEVLMRAGEEFPLKVAAIIKKNYPNQ TLVKLISSQIDADRMDYLLRDAYYTGVSYGKFDLERILRVLRPSPDGNGVIVKYSGMH AVEDYIMSRYQMYQQVYFHPVSRSGEVLLWKILERAKKLYCAGYEFQVTPVQVLPFFL NEVSLKDYIVLDDIVLMYYFSIWQEEEDPILSDLCSRFLNRRLLRYINYDPKEDAELY AELKGLLEKADIDPSYYLVIDSSSDLPYDYYLPGVGSGKDPIKLLMGNGELRELSTES PVVEAIGRERRTDIKLYYPLDFIESGDVDQAITERMIALIHAHSLKEK" misc_feature complement(2644048..2645265) /locus_tag="lmo2565" /note="HD superfamily phosphohydrolase [General function prediction only]; Region: YdhJ; COG1078" /db_xref="CDD:440696" regulatory complement(2645303..2645308) /regulatory_class="ribosome_binding_site" gene complement(2645310..2646146) /locus_tag="lmo2566" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984810" CDS complement(2645310..2646146) /locus_tag="lmo2566" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2566" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466089.1" /db_xref="GeneID:984810" /translation="MNIENTLLKQDVWRFIDNTTINPAFDAIQSFATDDTLCRSVGAR MAPSTVRGWVHEKTVSLGIQDSKLPDIDKGIAFLQKQGYRVVVRNSGGLAVVLDSGVL NLSMVLPDAERGIAIERGYETMFTLIKDMFVDCNEVIEAKEIEDSYCPGSYDLSIQGK KFAGISQRRMAKGVAVQIYLAIDGDQTTRSELIRDFYTISGKAKQTKYTFPDVNPNVM GSLSDLMKNDISLNGTLVRLFNSLRHYAGDLVSGTLTSEELDLFPAYYERLIARNDKV LT" misc_feature complement(2645346..2646107) /locus_tag="lmo2566" /note="Lipoate-protein ligase A [Coenzyme transport and metabolism]; Region: LplA; COG0095" /db_xref="CDD:439865" regulatory complement(2646155..2646160) /regulatory_class="ribosome_binding_site" regulatory complement(2646385..2646420) /regulatory_class="terminator" gene complement(2646464..2646664) /locus_tag="lmo2567" /db_xref="GeneID:984546" CDS complement(2646464..2646664) /locus_tag="lmo2567" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2567" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466090.1" /db_xref="GeneID:984546" /translation="MNSFWKIFFTVILGFIALNIVLDIVGITLHFLFPVLILGGIGYL LYRMWGNSPKRPSRDNEDRYNW" regulatory complement(2646672..2646677) /regulatory_class="ribosome_binding_site" gene complement(2646686..2647009) /locus_tag="lmo2568" /db_xref="GeneID:987246" CDS complement(2646686..2647009) /locus_tag="lmo2568" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2568" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466091.1" /db_xref="GeneID:987246" /translation="MKKGLFGLLAAIFVLTMVVIEFSAPIGSAANTYYVTIKNDGKEV TKSKFKGYSFRESCLDNQGNSHKVNFMSTTQLKKNKQYKIVVQDNELLVQAKEINSVP LASSK" misc_feature complement(2646689..2647009) /locus_tag="lmo2568" /note="conserved hypothetical protein TIGR01655; Region: yxeA_fam" /db_xref="CDD:130716" regulatory complement(2647019..2647024) /regulatory_class="ribosome_binding_site" regulatory complement(2647119..2647156) /regulatory_class="terminator" gene complement(2647164..2648825) /locus_tag="lmo2569" /db_xref="GeneID:987245" CDS complement(2647164..2648825) /locus_tag="lmo2569" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptide ABC transporter substrate-binding protein" /protein_id="NP_466092.1" /db_xref="GeneID:987245" /translation="MHKTARKMVVALSLLCLLVLTACQSGDKGESEKVTSDKKAKVVN IMETSGIPNASPTLADNSVSFRVINQIFEGLYRLDKNGKPALALAASEPEEKDGGKTL IFKIREDANWSNGDPVTAQDFEYAWKKVVDPKTAAAYGPQMEEIVKNATQILKGEMSP DELGIKALDDKTLQIELENPVPIFKELLTTGTFFPQNQAFVEKQGDRYGTKSDTLISN GPYKLENWNGTNMTWDYVKNPTYWDKKNVPTEKIHVTVVKDTNAALNLYNTNKLDRVE LDGEFVKQYKDDKNFHKEATGRSVYMKMNQGKDGVKTDLANLNLRRGLAMAIDKTGMV NTLLANGSKALNGDVPGDIMFDPETKEDFRKQNGDLLKFDQQEATNAWKQGLKEIGKS ELTLTLTSGDTSLQRKQTEFIQNQLEENLPGLTIKLKNVTNQASFQADVTQEFELLLG GWGGDYQDPLTYLNLFLTNSPGNHTGFSDAKYDELVLGAKGKLSADPEKRWQALLEAE QILLKDNAVLIPLYQGGRAYLQKSNLKNYTTYPIGSENYKWIEKN" misc_feature complement(2647179..2648705) /locus_tag="lmo2569" /note="The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold; Region: PBP2_OppA; cd08504" /db_xref="CDD:173869" misc_feature complement(order(2647254..2647256,2647461..2647475, 2647479..2647481,2647527..2647529,2647938..2647940, 2647998..2648000,2648631..2648633)) /locus_tag="lmo2569" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:173869" regulatory complement(2648833..2648838) /regulatory_class="ribosome_binding_site" regulatory complement(2648861..2648910) /regulatory_class="terminator" gene complement(2648960..2649574) /locus_tag="lmo2570" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984821" CDS complement(2648960..2649574) /locus_tag="lmo2570" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2570" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466093.1" /db_xref="GeneID:984821" /translation="MRKVGIFPSMIILFTVGISAVLYPLLPSEVAVHFGTDFSPDMFM QKWLGLILIPFLMIMFTGTEYYGKEKVNQESLLEFEYCFRLLLVLLTIIQMSIIVYAL GYDIPTGRFSLVTAGAFMFVVAAYIQYSKKLFKFLTMIGFKKIDAWSRNLLRKITTVT LNIAGTICFILALFMRNDPSYLMLAMLMTMCVIVVGSGVYLNKK" misc_feature complement(<2649194..2649571) /locus_tag="lmo2570" /note="Bacterial immunity/signal transduction membrane protein SdpI, SdpI/YbgB/DUF1648 family [Defense mechanisms]; Region: SdpI; COG5658" /db_xref="CDD:444377" regulatory complement(2649583..2649588) /regulatory_class="ribosome_binding_site" gene complement(2649598..2650230) /locus_tag="lmo2571" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987244" CDS complement(2649598..2650230) /locus_tag="lmo2571" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="nicotinamidase" /protein_id="NP_466094.1" /db_xref="GeneID:987244" /translation="MKIAAFDIDAQKGFTPLCPDELPVSGGDKIVPELNFMASLASLR IGSKDAHPQNAVWVVDSKDEMLAELEYPNADRTWVRHCEPGTKGFELLDGLPVVTDYD YFIWKGMEPDIHPYGACYHDIVEHLSTGVLEYLREQKVDLVLVGGLAFDFCVKTTVIQ LSRAGFSVLVYLPATRALSEQGFDETKEQLANTEKVQLIETREELVAYCQ" misc_feature complement(2649634..2650227) /locus_tag="lmo2571" /note="Nicotinamidase/pyrazinamidase (PZase). Nicotinamidase, a ubiquitous enzyme in prokaryotes, converts nicotinamide to nicotinic acid (niacin) and ammonia, which in turn can be recycled to make nicotinamide adenine dinucleotide (NAD). The same enzyme is...; Region: nicotinamidase; cd01011" /db_xref="CDD:238493" misc_feature complement(order(2649772..2649774,2649910..2649912, 2650204..2650206)) /locus_tag="lmo2571" /note="catalytic triad [active]" /db_xref="CDD:238493" misc_feature complement(order(2649988..2649990,2650078..2650080, 2650084..2650086)) /locus_tag="lmo2571" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238493" misc_feature complement(2649784..2649789) /locus_tag="lmo2571" /note="conserved cis-peptide bond [active]" /db_xref="CDD:238493" gene complement(2650231..2650755) /locus_tag="lmo2572" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985849" CDS complement(2650231..2650755) /locus_tag="lmo2572" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dihydrofolate reductase subunit A" /protein_id="NP_466095.1" /db_xref="GeneID:985849" /translation="MSEKQVALYIAVSLDGYIADENGSVEWLESIDSEGDAGYEAFFD NVDTVVMGRTTYQQIFSLTDTFPYSKKDVYVFSNTKAGTKDEYADFVAGTVDTWLNNI DGEKIWLVGGAKLVQQFLKERAIDRFVITIAPIILGKGIPLFEEDQEHALELEEVTRF GQFAQLTYKNLEEN" misc_feature complement(2650252..2650740) /locus_tag="lmo2572" /note="Dihydrofolate reductase [Coenzyme transport and metabolism]; Region: FolA; COG0262" /db_xref="CDD:440032" regulatory complement(2650239..2650244) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2572" gene complement(2650758..2651756) /locus_tag="lmo2573" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987242" CDS complement(2650758..2651756) /locus_tag="lmo2573" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="zinc-binding dehydrogenase" /protein_id="NP_466096.1" /db_xref="GeneID:987242" /translation="MKAVGLTKASTDFVDIEIDKPVPENHDLLVKIKAISINPVDTKQ REAAKLSGEEVRILGWDAVGEVVDTGSEVTLFQTGQDVYFAGDVTRPGVYAEYTLIDE RLVGLKPHNLNVEEAAAMPLTTITAWEALFDRLTITENDKGKSILIINGAGGVGSIAT QLAANTGLEVIATASRSETVEWTKSHGANYVINHRENIPEQLEELGFKKGVDFILCLH NTSAHWDEMQEAIRPQGKICSIVELTEPVEMTLLKDKSATFSYEFMFTRSKYDTADKI RQHEILTEAAHMLDKGNLTTTLNQVLSPVNAATIEEAHKIISSGKMIGKLVVKGFE" misc_feature complement(2650770..2651756) /locus_tag="lmo2573" /note="Arginate lyase and other MDR family members; Region: AL_MDR; cd08252" /db_xref="CDD:176214" misc_feature complement(order(2650965..2650973,2651034..2651039, 2651097..2651099,2651103..2651108,2651175..2651177, 2651220..2651222,2651232..2651237,2651289..2651294, 2651298..2651309,2651379..2651381,2651391..2651393, 2651628..2651630,2651637..2651645)) /locus_tag="lmo2573" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176214" misc_feature complement(order(2650941..2650943,2650947..2650949, 2650956..2650961,2650968..2651003,2651007..2651021, 2651031..2651033,2651055..2651060,2651085..2651087, 2651355..2651360,2651370..2651372)) /locus_tag="lmo2573" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:176214" regulatory complement(2650765..2650770) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2573" regulatory complement(2651766..2651771) /regulatory_class="ribosome_binding_site" regulatory complement(2651809..2651844) /regulatory_class="terminator" gene complement(2651853..2652125) /locus_tag="lmo2574" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987241" CDS complement(2651853..2652125) /locus_tag="lmo2574" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2574" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466097.1" /db_xref="GeneID:987241" /translation="MEEQVDLGHFLKKAFIAIGALTLVFIGVLAMFTIIGVIIAIPLL KKASKMLLSKKEDSDHTHSHGGKLKIKCPACHAKMKFKDSELLDEK" regulatory complement(2652134..2652139) /regulatory_class="ribosome_binding_site" gene complement(2652174..2653085) /locus_tag="lmo2575" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986612" CDS complement(2652174..2653085) /locus_tag="lmo2575" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cation transporter" /protein_id="NP_466098.1" /db_xref="GeneID:986612" /translation="MAHNHDHAHGHNHNHAHNANKKSLFISFILIATFMVVEVIGGIM TNSLALLSDAGHMLSDAVALGLSLAAFKFGEKAASSDKTYGYKRFEILAAFLNGLTLV GISVFIFYEAIGRFFDPPQVIGAGMMTISVIGLLINILVAWILMKGDTSENLNMRSAF LHVLGDLLGSVGAIIAALLIIFLGWNIADPIASVIVAALILVSGWRVLKDAIHILMEG KPANVDTEEIKTFFQQQDGVKEVHDLHVWAITSDFNALSAHLTVCEDADRDKILADIE HYLQENFSLEHSTIQLEGNHAHHHHCN" misc_feature complement(2652189..2653025) /locus_tag="lmo2575" /note="Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]; Region: CzcD; COG1230" /db_xref="CDD:440843" regulatory complement(2653095..2653100) /regulatory_class="ribosome_binding_site" regulatory complement(2653165..2653200) /regulatory_class="terminator" gene complement(2653211..2657803) /locus_tag="lmo2576" /db_xref="GeneID:986661" CDS complement(2653211..2657803) /locus_tag="lmo2576" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="colossin A" /protein_id="NP_466099.1" /db_xref="GeneID:986661" /translation="MITVKKYPMLLMSFLIVGMIIFCVPHHAQATELDNIIDGVQILD RDGKPIDSESDSDRVVDSQEDIVVVYNWSIKDNQPVHAGDTVHIQIPKEFKIYTTVQG ELVISDGGASCGEFEITTDGMMTITFNDYVENHSISHGIVEVYTNFDLEELDGETPTT IVFPISENDSEEFTIKIKPDTTNAFEKKGSTVQNAQVIDWEIKINQELATHENASVED FPGNGQKILFDSFEVHEMNMHIDGTYEIGAKVDPSEYTVTKINNTSGQTGFRLTFENP IDSAYQITYQTEITDFNKATFSNTATFNSDETEEVMDSDVVIPRDPIIQKYPLLFDTT SNKISWKVEYNQGHYALDNSVMVDTYIDEQSFGGITRIVNGDTGIPLLPTEYTVTDMG SAGFKIELPDDGYYTIYFETIVPEGTTGMISNTASIISPNIPDNEAEGDYFIPDPSPT EGLIDKKIENFNAKTGELTWEIIINKDGGTLHNPVITDEFPDGGLIFHPATLKIMDSE QVKLDSADYEVVPLNGDSSWEKGFQINFNRDITGQHVITYKTQVNPSTHTSGDNEYTN NATIKTDTAEASDSDTKWIDKVIDADGYKNGVFNYKTGEIEWKLIFNDSSKLISKPTI EDSLNSGQTFIQDSIEIHKIDLSATPQVGELIPPENYDVTFTKKENGNEQMLITFKKP LIHPVEVTYKTKPVGITKPLYKNKAVISDGEEVLADYEAEVIDDNANKYVNKSGEQVG DNIDWEIYANQSGSTVSNATVTDTLGTGQKLDTSSIKVYKSQTSVTGKMLQESNMPIS PGEYDLKTGVDEESNLEYFQVKFKNEINQSYVIKYQTAITLTSDTETTAQIGNSVTFT GDNITKGETEKTKNIEVKITTGDGTGTGETGKIILNKVDKADPSIPLEGATFDLYAND EKVDTQTTDKNGVIEFDDLVYGDYTLKEVSAPEGYTLPTASTENIQVKLEQDEKVVQV MNEKMPIKETGEVHLVKTDKATGATLAGAEFSLYDKSGAELQNGLTTDENGELTIHNL DLGSYYLKETKAPEGYKLSEKTWEFSVESGQVDAIEIQAENEKDLGEAVLTKVDSETN AKLSGAKFNLLNDSGEVIQTNLVSDENGEIRVQNLEPGDYAFQETEAPTNYDLATNTW PFTIVAGQTSATMVTAENNKTGKPDVDTGEVILVKQDSATGETLEGAVFDLMTADGAI VASNLTTDANGEITVTNLAPGKYSFKETKAPEGYELATDVWEFTIAPNQPEKITITAE NTKLAPIPDAGSVKIIKQDSENGVRLAGAEFSLIAENGETLQTNLKTDEAGELEVNNL APGNYRIQETKAPDGYQLESTPWQFEIVANDTSQVTVIAENAKLEPDVAETGAVRLIK TDSETGTRLSGAVFSLLDESGKVIQANLTTDENGEIFIDGLTPGNYSLKETKAPDGYE LAEQPWNFQIVKGQVDAVIIKAENSPIIANGAISFEGDETDKPESIEIPVRKTDTLAT EVTKLPQTGDKTSFPRVILGGSAVLMSLLYLRKKSS" misc_feature complement(2657357..2657626) /locus_tag="lmo2576" /note="Bacterial Ig domain; Region: Big_8; pfam17961" /db_xref="CDD:465589" misc_feature complement(2656865..2657257) /locus_tag="lmo2576" /note="Collagen binding domain; Region: Collagen_bind; pfam05737" /db_xref="CDD:283410" misc_feature complement(2655665..2656030) /locus_tag="lmo2576" /note="Collagen binding domain; Region: Collagen_bind; pfam05737" /db_xref="CDD:283410" misc_feature complement(2655218..2655610) /locus_tag="lmo2576" /note="Collagen binding domain; Region: Collagen_bind; pfam05737" /db_xref="CDD:283410" misc_feature complement(2653442..2655277) /locus_tag="lmo2576" /note="Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis]; Region: ClfA; COG4932" /db_xref="CDD:443959" misc_feature complement(2653220..2653312) /locus_tag="lmo2576" /note="LPXTG-motif cell wall anchor domain; Region: LPXTG_anchor; TIGR01167" /db_xref="CDD:273478" regulatory complement(2657812..2657817) /regulatory_class="ribosome_binding_site" regulatory complement(2657971..2658017) /regulatory_class="terminator" gene complement(2658024..2658851) /locus_tag="lmo2577" /db_xref="GeneID:987240" CDS complement(2658024..2658851) /locus_tag="lmo2577" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466100.1" /db_xref="GeneID:987240" /translation="MANVAIDTVITDMDGTLLVKKGDQIHPLNKEVLMEWQKKGKKLF LATGRLDLAILPFIHELNIKTPVISCNGGLVRDFTTGEILYKSNIELDLIHTVLETLE PLDVNYHIYTTERILGPSNTGKIAFFNELNKTLPENEQVPITLTTDPFSVLREGEFPL KVLVIESDLEKRAEIKAALEGLPLSVLASASNLIDIMNEGIDKAKGLTYLAEHGYINL DSTIAFGDNENDVGMIELAEIGVAMENGIPLAIEKADKIAKHHDIGGLGLFMQEEIL" misc_feature complement(2658042..2658827) /locus_tag="lmo2577" /note="Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; Region: Cof-subfamily; TIGR00099" /db_xref="CDD:272905" regulatory complement(2658861..2658866) /regulatory_class="ribosome_binding_site" regulatory 2658953..2658958 /regulatory_class="ribosome_binding_site" gene 2658966..2659841 /locus_tag="lmo2578" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987239" CDS 2658966..2659841 /locus_tag="lmo2578" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2578" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466101.1" /db_xref="GeneID:987239" /translation="MKKYFITIMILLFGALSLSACQKDDEVENSSPPKVDLKNEIPII LIHGSGGDTHSLDEMADHLMNKYKSSNEAMSMSINSNGKIAYQGALTKDAKRPIIKFG FDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPT LRKLVAIGSPFNDLDPDDNGDGLAFNKLPSNTPQLDYFIDKKTKISTDLEVLSIAGAL SEDNLTDGIVPTNSSLASRLFMPNNAKVYMEDLQVGESAIHQTLHETSESIEKTHWFL EKSSPEKKEIKLISK" misc_feature 2658966..2659805 /locus_tag="lmo2578" /note="Uncharacterized conserved protein with an alpha/beta hydrolase fold [Function unknown]; Region: COG4814" /db_xref="CDD:443842" regulatory 2659840..2659845 /regulatory_class="ribosome_binding_site" gene 2659852..2660145 /locus_tag="lmo2579" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987238" CDS 2659852..2660145 /locus_tag="lmo2579" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466102.1" /db_xref="GeneID:987238" /translation="MLHIQAKVQVKPDLVAEFLVEVNLVIQGSLSETGNHGYELVCSV ENANIFYILEKWADESAIQFHNGTEHYKLFKKNVPAFLATPIEVDLLAPVERR" misc_feature 2659855..2660124 /locus_tag="lmo2579" /note="Quinol monooxygenase YgiN [Energy production and conversion]; Region: YgiN; COG1359" /db_xref="CDD:440970" gene complement(2660178..2660339) /locus_tag="lmo2579a" /db_xref="GeneID:16695805" CDS complement(2660178..2660339) /locus_tag="lmo2579a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475643.1" /db_xref="GeneID:16695805" /translation="MDGVQTIESFGVEELVYEPLIRTKEDYTYTGKFIFTKTKMMLVS KKQNFLVLI" gene 2660179..2660364 /locus_tag="lmos90" /db_xref="GeneID:18245110" misc_RNA 2660179..2660364 /locus_tag="lmos90" /product="rli49" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245110" regulatory complement(2660365..2660403) /regulatory_class="terminator" gene complement(2660408..2661076) /locus_tag="lmo2580" /db_xref="GeneID:987237" CDS complement(2660408..2661076) /locus_tag="lmo2580" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_466103.1" /db_xref="GeneID:987237" /translation="MTLMMKNITKNYQDGEQVIEVLKNVSLEVAQGEFVAIVGPSGAG KSTFLSIAGALLSPTEGEIAIGGKVLNDLTSKDLTKVRLDKVGFIFQGANLIPYLNVR DQLLVIAELSGDKGRVAKEKADELLKELGLTARENNYPESLSGGEKQRVAIARALMND PDIILADEPTASLDASRGHKVVQMIADEVKRKNKAAIMVTHDERVLDLVDRVIRIEDG YLKD" misc_feature complement(2660417..2661076) /locus_tag="lmo2580" /note="ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]; Region: LolD; COG1136" /db_xref="CDD:440751" gene complement(2661076..2662164) /locus_tag="lmo2581" /db_xref="GeneID:985386" CDS complement(2661076..2662164) /locus_tag="lmo2581" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466104.1" /db_xref="GeneID:985386" /translation="MFLALRELKHAKLRYILIGLIMVLIAWLVLFVTGLANGLANDNG AAISSNKATYYVLQKDSDNRLTRSNLTASETDSVAKQVKKSESTNLGVQMGTITPPNK DKKTDITYFGIDKTGFMKPAISEGTEPQKTKEVVADISLKESGYKLGSKLKDSATGEE FTITAFTKNNTFSHSPVIFVGWDAWKLVHQTNQAAEGEYNAVALDVSESTAKNLSLGS MELSSSEEVLQGIPGYSEEQGSLLMMIAFLFVIAAFVLAAFFYVITIQKINQFGILKA VGARTAYLGRSIVTQVVFLSVISLLIGNGLTFGLAAILPASMPFTLSPVLAIGCSALF LVVAVIGSMLSLYRVAKVDALEAIGRAN" misc_feature complement(2661091..2661777) /locus_tag="lmo2581" /note="ABC-type transport system involved in lipoprotein release, permease component LolC [Cell wall/membrane/envelope biogenesis]; Region: LolE; COG4591" /db_xref="CDD:443648" regulatory complement(2661085..2661090) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2581" regulatory complement(2662173..2662178) /regulatory_class="ribosome_binding_site" gene complement(2662243..2663622) /locus_tag="lmo2582" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985564" CDS complement(2662243..2663622) /locus_tag="lmo2582" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="NP_466105.1" /db_xref="GeneID:985564" /translation="MKSLYSRIVVTMLVVILSSSLLGFFFANIYYQIKLKLFNDEKTA KIAKEVQQFYESNATISLNEYLENVGELGYELYLTDGAEKSTYFGGAFRKKDLPDKTI KQVLDGDTYHGIDSFDTGIFITGFFDNDVRNTIGVPVQVDGKQLALFIRQDPEQQFGE LRIFFAMILIFTSIISILFVLISGRYIVNPVVKLTNATKKIRKGNYDVAFEVRRKDEI GQLADSFTKMASELEKSEAARQEFVANVSHELQSPLTSMQGFARLLGSGTLTEKEQAE YLTVLSEETTRLSSLTKQLLTLASLDQESELRKKEPVHLAKQWRQLIQMTEWSWREKE LTINLDLADVNYTGDAELLYQVWSNLLTNAIKFTPQGGNIQVRLYEDTTNVFVEVQDS GVGISKVDMTKIFDRFYKANESRTREEGSSGLGLSICQKIITLHHGEVTVQSSLEKGT TFTVKLPKN" misc_feature complement(2662246..2663283) /locus_tag="lmo2582" /note="Sensor histidine kinase WalK [Signal transduction mechanisms]; Region: WalK; COG5002" /db_xref="CDD:444026" gene complement(2663619..2664296) /locus_tag="lmo2583" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987235" CDS complement(2663619..2664296) /locus_tag="lmo2583" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator" /protein_id="NP_466106.1" /db_xref="GeneID:987235" /translation="MKQILVVDDDRHILKLVGHYLRAEGFHVLEASDGVEAEKIVETE QVHLAVIDVMMPNMDGFELCQKMRASYPDIPVIMLTAKDALADKSRGFEVGTDDYVTK PFEPEELIFRIRALLRRSNQASEVKINIGNITIDQKSYGIKIGNQERMIPVKEFELLY QLASYPGRIFTREELIERIWQRDYDGSDRTVDVHIKRLRDHFDEEKDGIRIVTVRGVG YKLEETR" misc_feature complement(2663682..2664296) /locus_tag="lmo2583" /note="DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]; Region: OmpR; COG0745" /db_xref="CDD:440508" regulatory complement(2663630..2663635) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2583" regulatory complement(2664305..2664311) /regulatory_class="ribosome_binding_site" gene complement(2664343..2665128) /locus_tag="lmo2584" /db_xref="GeneID:987234" CDS complement(2664343..2665128) /locus_tag="lmo2584" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth" /codon_start=1 /transl_table=11 /product="formate dehydrogenase accessory protein" /protein_id="NP_466107.1" /db_xref="GeneID:987234" /translation="MDIVSHQKIRRFEAGTFQEIESSVATEYPLTIYVNDQELVTIVC TPEYLEDLVVGFLTSEGIVRGPRDINSVDIIEATGHAKVSANFVNKFNAKYRGKRYIT SCCGKSRENFYFQSDASLVNVKQNGNLQLTTDMIFRLMEKFEQNSATFHQTGGVHNAA LCSSAEIIYSRMDIGRHNALDKIYGRALQDGTSTEDKAIIFSGRISSEILVKTAKLGC GIILSRSAPTELAINMAEELNITTVGFIRGDRLNVYSGFERIT" misc_feature complement(2664352..2665128) /locus_tag="lmo2584" /note="formate dehydrogenase accessory sulfurtransferase FdhD; Region: PRK00724" /db_xref="CDD:234823" regulatory complement(2665137..2665142) /regulatory_class="ribosome_binding_site" regulatory complement(2665147..2665184) /regulatory_class="terminator" gene complement(2665190..2665666) /locus_tag="lmo2585" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987233" CDS complement(2665190..2665666) /locus_tag="lmo2585" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466108.1" /db_xref="GeneID:987233" /translation="MAEPISTIRDTKKTPEELEKERLEQMKADIAEQDSGFIEILETV KLLQESGALEALNSAIKARGDITKTFLNEWRKEPMTNAINNMMISSKLLTDTKPEQTE EMIANLKNAAKKAEESAKNDEIMGMLAMMKALKDPDINRALRYGVTFLKEVGQTLK" misc_feature complement(2665193..2665666) /locus_tag="lmo2585" /note="Uncharacterized conserved protein YjgD, DUF1641 family [Function unknown]; Region: YjgD; COG2427" /db_xref="CDD:441975" gene complement(2665666..2668653) /locus_tag="lmo2586" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987231" CDS complement(2665666..2668653) /locus_tag="lmo2586" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="formate dehydrogenase subunit alpha" /protein_id="NP_466109.1" /db_xref="GeneID:987231" /translation="MGAKVSVQINGVARDVVEGTRMLDYLNAEGIQHPHICYSEQIGP IQSCDTCMCEVDGELMRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVC DNNNGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQ VQVNETLSIDWERSQPRVIWDDDRPANLSSCVSCGLCATVCPCNALMEKSMLGQAGFM TGLDEDMLEPMIDMVKKVEPNYQTVFAVSEMEASMRETRTKKTKTVCTFCGVGCTFEV WTKDRKILKVEPTGEGPVNKFATCVKGKFGWDFVNSEKRITTPLIREGNEFVPASWED AIHLVATKLREIQAKYGNDSLGFISSSKTTNEENYLMQKLARQVFETNNIDNCSRYCQ APASDGLTRTVGIGADSGTVEDIESAGLVIIVGASPADGHPVLASRIKRAQKTRGQKL IVSDLRKHEMAERSDLFIHPKQGTDFVWLTAVAKYMIDQGWHDEVFMENRISNVADYL AFLEPFTLEYAEKETGLSVETLKKVAQMVHEADGTAVCWGMGVTQNIAGSHTSSAIAN LLLVTGNFGRHGAGAYPLRGHNNVQGACDMGSLPNVLPGIQPLGNDEVRARFEEAYGV SISSEPGLKNNEMLDAIEAGTLHSMYVIGEEMAWVDSNSNHVQEILASLDFFVVQDVF LSKTAQFADVVFPAAPSLEKEGTFTNTERRVQRLYEVLEPLGDSKPDWWIIQEVARAC GRTDWNYDHPSEIMDEIASLAPFFAGVRYDRMQGFNSLVWPVSADGKDMPLLYEERFN FPDGKAQFSTLPYIAPITFPEEYNLTLNNGRLLEQFHEGNLTDKSKGLDYKLPEVFVE VSHELAKERDLESGSLVRLSSPYGRIKLRAVVTDRMKGNEVYVPMHSVSSETAVNLLT SSAGDVRTKTPAYKQTKVNLTVLEKTGKNPLPDHNPRNRKRFPQNGAEVARKWSREDY QPISKVNCACGGNCGCGGKGRNH" misc_feature complement(2667256..2668644) /locus_tag="lmo2586" /note="NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) [Energy production and conversion]; Region: NuoG; COG1034" /db_xref="CDD:440657" misc_feature complement(2665840..2667882) /locus_tag="lmo2586" /note="Predicted molibdopterin-dependent oxidoreductase YjgC [General function prediction only]; Region: YjgC; COG3383" /db_xref="CDD:442610" regulatory complement(2665675..2665680) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2586" regulatory complement(2668661..2668666) /regulatory_class="ribosome_binding_site" gene 2668833..2669082 /locus_tag="lmos91" /db_xref="GeneID:18245175" misc_RNA 2668833..2669082 /locus_tag="lmos91" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245175" regulatory 2669138..2669143 /regulatory_class="ribosome_binding_site" gene 2669152..2669994 /locus_tag="lmo2587" /db_xref="GeneID:987227" CDS 2669152..2669994 /locus_tag="lmo2587" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466110.1" /db_xref="GeneID:987227" /translation="MTKQLLVLQSDFGISDGAVSAMYGVINSVSIDLQIYDLTHQIPQ FNIWEASYRLLQTVTYWPEDTIFVSIVDPGVGSKRRSVAVLTEDGHYIITPDNGTLTH IAHYGTIKAVRLIDEEKNRLPKSGASHTFHGRDIFAYTAARLAAGVINFEDIGPAANP DSIVSLSLSDSYLEGDQAFGTIDIIDRPFGNLWTNIRRTDFFELGANYGDSIEVLIKH HDRIVYKNFVTYSRSFADLRIGEALIYVNSLDNLGLGINQGSFVDAYSVGTGTSWKVT LKKV" misc_feature 2669164..2669988 /locus_tag="lmo2587" /note="Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming) [Coenzyme transport and metabolism, Defense mechanisms]; Region: COG1912" /db_xref="CDD:441516" regulatory complement(2669991..2670030) /regulatory_class="terminator" regulatory 2669999..2670044 /regulatory_class="terminator" gene complement(2670042..2671523) /locus_tag="lmo2588" /db_xref="GeneID:987224" CDS complement(2670042..2671523) /locus_tag="lmo2588" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="multidrug transporter" /protein_id="NP_466111.1" /db_xref="GeneID:987224" /translation="MNSTAVERPVDVNGKSYSRSLLVVTMIIGAFVAILNQTLLATAL PMIMDDLHITAATGQWLTTAFLLTNGIMIPITALLIEKISSKTLFITAMTVFTIGTII ASVAGSFPILLTGRIVQAAGAGIMMPLLQTIFLLIFPREKRGAAMGLMGLVIAFAPAI GPTLSGWIVDSYDWRVLFLILIPIAVIDIILAFFGMKKVVKLTDTKIDFLSIVMSSIG FGALLYGFSSAGNDGWGDTTVITMLIVGVVVIALFVWRQLVIDNPMLELHVFKYPVFS LSVILGSIVTMAMIGAEIVLPLYIQTIRGESALQSGLLLLPGAIIMGIMSPITGIIFD KIGAKWLTITGVTILTIGTIPFMFLTMDTPLWYIVVFYAVRFFGISMAMMPVSTAGMN ALPNHLINHGSAVNNTIRQIAGSIGTAVLITVLTNVTKDNMPGKALMATDPASFAQKA QDASLDGMRAAFMVAAIFAAIGMILSLFLKTKKQEPIVKEYTK" misc_feature complement(2670084..2671448) /locus_tag="lmo2588" /note="Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_LmrB_MDR_like; cd17503" /db_xref="CDD:341046" misc_feature complement(order(2670282..2670284,2670291..2670296, 2670303..2670308,2670315..2670317,2670363..2670365, 2670375..2670377,2670387..2670392,2670546..2670548, 2670558..2670560,2670642..2670644,2670651..2670659, 2670666..2670671,2670678..2670680,2671050..2671052, 2671059..2671064,2671071..2671073,2671131..2671133, 2671140..2671148,2671152..2671157,2671305..2671307, 2671401..2671403,2671410..2671415,2671422..2671427)) /locus_tag="lmo2588" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341046" regulatory complement(2671531..2671536) /regulatory_class="ribosome_binding_site" regulatory complement(2671573..2671617) /regulatory_class="terminator" gene complement(2671624..2672511) /locus_tag="lmo2589" /db_xref="GeneID:987223" CDS complement(2671624..2672511) /locus_tag="lmo2589" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="NP_466112.1" /db_xref="GeneID:987223" /translation="MKEKKQRIIKSAKEVFQKQGYLKTSVQDMVDAAGISKGTFYNYF TSKEELAIVIFKQEYSVLHQRLEYTMAQDGAKKDNFTECLKIIIHFYTENGEILNITF SQTMIDDDFNAFLQNVRLKNMEWVKYQLLEVYGEETKPYINDITMLLSGMAAMYVFAS GSKNVNTGLIERAIPYVVRRLDALVKDILESGEIVFTEADTENLVPDQTMIRKKRLAK LREALEELNVGIENADIADSDKWQYKESMNALVGEINNNEAPRDFMVQGTLLYLKQHV PASLTKEVNKLEACVNGLL" misc_feature complement(2672056..2672508) /locus_tag="lmo2589" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" regulatory complement(2672521..2672525) /regulatory_class="ribosome_binding_site" gene complement(2672664..2672736) /locus_tag="lmot63" /db_xref="GeneID:3167613" tRNA complement(2672664..2672736) /locus_tag="lmot63" /product="tRNA-Thr" /db_xref="GeneID:3167613" gene complement(2672761..2672836) /locus_tag="lmot64" /db_xref="GeneID:3167614" tRNA complement(2672761..2672836) /locus_tag="lmot64" /product="tRNA-Asn" /db_xref="GeneID:3167614" gene complement(2672851..2672960) /locus_tag="lmor16" /db_xref="GeneID:984512" rRNA complement(2672851..2672960) /locus_tag="lmor16" /product="5S ribosomal RNA" /db_xref="GeneID:984512" gene complement(2673041..2675971) /locus_tag="lmor17" /db_xref="GeneID:986314" rRNA complement(2673041..2675971) /locus_tag="lmor17" /product="23S ribosomal RNA" /db_xref="GeneID:986314" gene complement(2676144..2676219) /locus_tag="lmot65" /db_xref="GeneID:3167615" tRNA complement(2676144..2676219) /locus_tag="lmot65" /product="tRNA-Ala" /db_xref="GeneID:3167615" gene complement(2676266..2676339) /locus_tag="lmot66" /db_xref="GeneID:3167616" tRNA complement(2676266..2676339) /locus_tag="lmot66" /product="tRNA-Ile" /db_xref="GeneID:3167616" gene complement(2676467..2678012) /locus_tag="lmor18" /db_xref="GeneID:985562" rRNA complement(2676467..2678012) /locus_tag="lmor18" /product="16S ribosomal RNA" /db_xref="GeneID:985562" gene complement(2678302..2679330) /locus_tag="lmo2590" /db_xref="GeneID:985589" CDS complement(2678302..2679330) /locus_tag="lmo2590" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP-binding protein" /protein_id="NP_466113.1" /db_xref="GeneID:985589" /translation="MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIA LADPAVETDHFVHNIEELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKF LAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPHKENGQ IIPVETHGIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKLDYLLIDLPPGT GDVALDIHTLIPKCNELIVTTPHYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLAD GQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNGNGYVSALFNSSSTSGKAYKTLA EKIIPYLS" misc_feature complement(<2678884..2679291) /locus_tag="lmo2590" /note="Flp pilus assembly ATPase CpaE/TadZ, contains N-terminal REC/TadZ_N domain [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Region: CpaE; COG4963" /db_xref="CDD:443989" misc_feature complement(2678317..2679033) /locus_tag="lmo2590" /note="NUBPL iron-transfer P-loop NTPase; Region: ParA; pfam10609" /db_xref="CDD:431392" misc_feature complement(order(2678410..2678412,2678416..2678418, 2678581..2678583,2678590..2678592,2678662..2678664, 2678671..2678673,2678677..2678679,2678767..2678772, 2678890..2678895,2678902..2678904,2678908..2678913, 2678998..2679006)) /locus_tag="lmo2590" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:349757" misc_feature complement(order(2678413..2678421,2678524..2678529, 2678602..2678604,2678608..2678610,2678983..2679006)) /locus_tag="lmo2590" /note="active site" /db_xref="CDD:349757" regulatory complement(2679340..2679345) /regulatory_class="ribosome_binding_site" regulatory 2679583..2679588 /regulatory_class="ribosome_binding_site" gene 2679599..2681125 /locus_tag="lmo2591" /db_xref="GeneID:984569" CDS 2679599..2681125 /locus_tag="lmo2591" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase" /protein_id="NP_466114.1" /db_xref="GeneID:984569" /translation="MDRKFIKPGIILLIVAFLVVSINVGAETGGSRTAQVNLTTSQQA FIDEILPAAQDGYRDGKLLTSVTLAQAILESNWGESGLSQNSKNLFGIKGTYKGKSVS MGTMEASGSTTANFRVYPSWKESIEDHTALITENARYQDAVDETDYRKALQAIKDGGY ATDPDYVSKLVAIIERYNLDKYDVIYDKIESNQSLAAIGTVAENKKQEVIWSAPYNTE NANKIGTLENYSGRNLEISWEAKTEKGLWYFIRENNKDIGWINSNALKISYHQKEDEN VHLTKYVDDLSAHVYRLPSPEKQFDNGTIAKYDRKALQVDKKITRGGYAWFRISEGEK VIGWVRADKLNDRLYDRITEQTSYDGYALVSKSATDNVWTAPFNTKNAEKLAPLADYN NEKLEIVTRAKAGNTLWYQFKVDGKLVGWASEKDLNVFYTTAKEEPVKQVAYVKDPTA KLYNKPVESTSTNPKAVGFYYGKLLAVDKTATILGEDWLHLKDSQNSLGWIKAIDINS " misc_feature <2679674..2680141 /locus_tag="lmo2591" /note="Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility]; Region: FlgJ; COG1705" /db_xref="CDD:441311" misc_feature 2680157..2680399 /locus_tag="lmo2591" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 2680403..2680639 /locus_tag="lmo2591" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 2680646..2680888 /locus_tag="lmo2591" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature 2680889..2681119 /locus_tag="lmo2591" /note="GW (Gly-Tryp) dipeptide domain; Region: GW; cl16279" /db_xref="CDD:472893" regulatory complement(2681124..2681156) /regulatory_class="terminator" regulatory 2681135..2681167 /regulatory_class="terminator" gene complement(2681167..2682018) /locus_tag="lmo2592" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987219" CDS complement(2681167..2682018) /locus_tag="lmo2592" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aldo/keto reductase" /protein_id="NP_466115.1" /db_xref="GeneID:987219" /translation="MKTVKLNNGVEVPILGFGTYQITDAAEAEHAVKDAIKAGYRHID TAQSYMNEEAVGRGIAASGVDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYVD LLLIHQPFNDVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFNEVTPQVNQIEV NPFQQQTANLAILRKEGVAIEAWAPFAEGKNDIFNNPVLTKIGAKYGKSAAQVILRWL VEQDIIVLAKSVKPERMAQNLAIFDFELTEADKEEIAGLDQGESQFFSHADPEMVKWM ASRKLNV" misc_feature complement(2681245..2682009) /locus_tag="lmo2592" /note="the AKR5F family of aldo-keto reductase (AKR); Region: AKR_AKR5F1; cd19133" /db_xref="CDD:381359" misc_feature complement(order(2681305..2681310,2681317..2681319, 2681326..2681343,2681386..2681388,2681422..2681424, 2681452..2681472,2681548..2681550,2681611..2681616, 2681695..2681700,2681797..2681799,2681872..2681877, 2681887..2681889,2681959..2681967)) /locus_tag="lmo2592" /note="active site" /db_xref="CDD:381359" misc_feature complement(order(2681698..2681700,2681797..2681799, 2681872..2681874,2681887..2681889)) /locus_tag="lmo2592" /note="catalytic tetrad [active]" /db_xref="CDD:381359" regulatory complement(2682027..2682032) /regulatory_class="ribosome_binding_site" gene complement(2682040..2682462) /locus_tag="lmo2593" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987218" CDS complement(2682040..2682462) /locus_tag="lmo2593" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="NP_466116.1" /db_xref="GeneID:987218" /translation="MNIKQAADMFGLTVDTLRYYERVGVIPPVHRNESGYRDYKTSDL NWVYLVKNLRNAGLSVESLIEFATLAQLRETQNVEAAQKQVLVDQLKELDEKLAEMKQ VRDLLVYKIDSYDSHIAQFKAGELNADNVEKLWERDKF" misc_feature complement(2682118..2682462) /locus_tag="lmo2593" /note="Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB; Region: HTH_YyaN; cd01109" /db_xref="CDD:133384" misc_feature complement(order(2682352..2682360,2682409..2682411, 2682451..2682459)) /locus_tag="lmo2593" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133384" misc_feature complement(order(2682151..2682156,2682163..2682165, 2682175..2682177,2682193..2682195,2682205..2682207, 2682265..2682267,2682292..2682297,2682307..2682309, 2682316..2682318)) /locus_tag="lmo2593" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:133384" regulatory complement(2682472..2682477) /regulatory_class="ribosome_binding_site" regulatory complement(2682552..2682581) /regulatory_class="terminator" gene complement(2682584..2682943) /locus_tag="lmo2594" /db_xref="GeneID:987217" CDS complement(2682584..2682943) /locus_tag="lmo2594" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2594" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466117.1" /db_xref="GeneID:987217" /translation="MKKTSIIFIFCTLLFVTACSTSENQTQATEATGTIEQVETDAIL INNFKEKKDKYNPEAAIRFDIVDKYYDETGNKIKITDLNKNDDVKIILTKDFPIQETS PAQIDPKYVQKIILLNK" misc_feature complement(<2682845..2682943) /locus_tag="lmo2594" /note="Domain of unknown function (DUF333); Region: DUF333; cl46806" /db_xref="CDD:481146" regulatory complement(2682952..2682957) /regulatory_class="ribosome_binding_site" regulatory 2683173..2683178 /regulatory_class="ribosome_binding_site" gene 2683187..2684056 /locus_tag="lmo2595" /db_xref="GeneID:986306" CDS 2683187..2684056 /locus_tag="lmo2595" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466118.1" /db_xref="GeneID:986306" /translation="MKKRGLLLVSVLMLFIFLTVACGSSEDNEESGEISTKEIELTVD DPIIPTDENGEATIEGTVDPKSKLTIDGKAVKKDDSGRFTYTYSLTNDNVAEVDVKLL AVRKNYKDEKYTITITNNSKAYNDNMVKQEAIQKEEAEKAEKERKEAEEKAKQEEEAA AAKAATTDENTPSDDTVYGTLASKDTLTKEGDAFYKDEALDVLYSTVENDEIFQVLIQ LGDESTIRKDLDKNHLTELARDYMESDATLIQTVSDESFVYESPSINKTYTVDYMLND EGYVIAVYVTQAK" misc_feature 2683187..>2683315 /locus_tag="lmo2595" /note="Maltose-binding periplasmic protein MalE [Carbohydrate transport and metabolism]; Region: MalE; COG2182" /db_xref="CDD:441785" regulatory 2684055..2684097 /regulatory_class="terminator" regulatory complement(2684206..2684236) /regulatory_class="terminator" gene complement(2684251..2684643) /gene="rpsI" /locus_tag="lmo2596" /db_xref="GeneID:987216" CDS complement(2684251..2684643) /gene="rpsI" /locus_tag="lmo2596" /experiment="EXISTENCE:[PMID:19448609]" /note="forms a direct contact with the tRNA during translation" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S9" /protein_id="NP_466119.1" /db_xref="GeneID:987216" /translation="MAQVQYYGTGRRKSSVARVRLVPGDGKIVINNRDWEDYIPFAAL REVIKQPLVATETLGNYDVLVNVHGGGYTGQAGAIRHGVARALLQVAPEYRPALKSAG LLTRDSRMKERKKPGLKGARRAPQFSKR" misc_feature complement(2684254..2684643) /gene="rpsI" /locus_tag="lmo2596" /note="30S ribosomal protein S9; Reviewed; Region: rpsI; PRK00132" /db_xref="CDD:178888" regulatory complement(2684652..2684657) /regulatory_class="ribosome_binding_site" gene complement(2684665..2685102) /gene="rplM" /locus_tag="lmo2597" /db_xref="GeneID:984622" CDS complement(2684665..2685102) /gene="rplM" /locus_tag="lmo2597" /experiment="EXISTENCE:[PMID:19448609]" /note="in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L13" /protein_id="NP_466120.1" /db_xref="GeneID:984622" /translation="MRTTYMAKPGEVERKWYVIDATGVSLGRLSSEVASILRGKNKPQ FTPHIDTGDFVIIINAGKIGLTGKKATDKIYYRHSQYPGGLKSRTAGEMRTNNPEKLL ELSIKGMLPKNSLGRQLFKKLHVYGGSEHEHAAQQPEVYELRG" misc_feature complement(2684668..2685087) /gene="rplM" /locus_tag="lmo2597" /note="Ribosomal protein L13 [Translation, ribosomal structure and biogenesis]; Region: RplM; COG0102" /db_xref="CDD:439872" regulatory complement(2685110..2685115) /regulatory_class="ribosome_binding_site" gene 2685181..2685233 /locus_tag="lmos92" /db_xref="GeneID:18245176" misc_RNA 2685181..2685233 /locus_tag="lmos92" /product="L13" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245176" gene complement(2685297..2686043) /gene="truA" /locus_tag="lmo2598" /gene_synonym="hisT" /db_xref="GeneID:986311" CDS complement(2685297..2686043) /gene="truA" /locus_tag="lmo2598" /gene_synonym="hisT" /EC_number="5.4.99.12" /experiment="EXISTENCE:[PMID:19448609]" /note="mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine synthase A" /protein_id="NP_466121.1" /db_xref="GeneID:986311" /translation="MTRYKAIISYDGSGFYGYQVQPNTRTVQAEIEKALTKMHKGKTV RVTASGRTDTGVHAKGQVIHFDSELDITAEKFQKALQVMTPFDISFLTVEEVPDDFHA RFGTVGKEYRYVVKRTKIFDPFSRNFALHYPYELDISKMKLASKRLIGEHDFTSFCSA RTERDSKVRTLYSIDFYEEDDETLVIAFQGNGFLYNMVRILTGTLLDAGQGRISPDDI SEALLARDRQKLISKTAPPQGLYLWRVDYE" misc_feature complement(2685300..2686043) /gene="truA" /locus_tag="lmo2598" /gene_synonym="hisT" /note="tRNA U38,U39,U40 pseudouridine synthase TruA [Translation, ribosomal structure and biogenesis]; Region: TruA; COG0101" /db_xref="CDD:439871" gene complement(2686049..2686846) /locus_tag="lmo2599" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987215" CDS complement(2686049..2686846) /locus_tag="lmo2599" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466122.1" /db_xref="GeneID:987215" /translation="MMDKMILGRYIPGNSWLHRIDPRAKITAVMAFIAIVFLANNWLT YALMFVYVLYLVLTSKVPFLFFIKGLQPIFWLILITLLLQVFFTKGGTVLVDLGLLQI TTLGLANGAMMFCRFVLIIFMTTLLTLTTSPIELTDGLEKILAPFRLVHLPVHELALM LSISLRFIPTLMDETEKILKAQKARGVEFTSGKWSDRIKAIIPLLVPLFISAFKRAED LAIAMEARGYRGGKGRTRFRLLRWRFADTFLLISLAVLSGLLFWLRS" misc_feature complement(2686058..2686834) /locus_tag="lmo2599" /note="ECF-type transporter transmembrane protein EcfT [Coenzyme transport and metabolism]; Region: EcfT; COG0619" /db_xref="CDD:440384" misc_feature complement(order(2686151..2686153,2686157..2686159, 2686175..2686180,2686187..2686189,2686199..2686204, 2686208..2686213,2686217..2686225,2686229..2686237, 2686241..2686246,2686319..2686324,2686331..2686336, 2686343..2686348,2686352..2686360,2686364..2686369, 2686379..2686381,2686448..2686450,2686463..2686468, 2686475..2686477,2686496..2686498,2686508..2686510, 2686598..2686603,2686610..2686615,2686625..2686627, 2686736..2686741,2686748..2686753,2686757..2686762)) /locus_tag="lmo2599" /note="S component interface [polypeptide binding]; other site" /db_xref="CDD:410987" misc_feature complement(order(2686136..2686138,2686142..2686144, 2686154..2686162,2686169..2686186,2686190..2686195, 2686202..2686204,2686337..2686342,2686346..2686351, 2686358..2686360,2686370..2686372)) /locus_tag="lmo2599" /note="A' component interface [polypeptide binding]; other site" /db_xref="CDD:410987" misc_feature complement(order(2686217..2686219,2686226..2686231, 2686238..2686240,2686286..2686309)) /locus_tag="lmo2599" /note="A component interface [polypeptide binding]; other site" /db_xref="CDD:410987" regulatory complement(2686052..2686057) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2599" gene complement(2686849..2687715) /gene="cbiO" /locus_tag="lmo2600" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986309" CDS complement(2686849..2687715) /gene="cbiO" /locus_tag="lmo2600" /experiment="EXISTENCE:[PMID:19448609]" /note="with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene" /codon_start=1 /transl_table=11 /product="cobalt ABC transporter ATP-binding subunit" /protein_id="NP_466123.1" /db_xref="GeneID:986309" /translation="MEIKLEQLGYCYQKNSPFEKRALLDVNVSFDSGSYSAIIGHTGS GKSTLLQHLNALLMPTEGKITVGDREIVAGVKQKKLRDLRKKVGIVFQFPEAQLFEET VEKDICFGPMNFGVSEEDAKLRAKKVIYEVGLTEEILSRSPFELSGGQMRRVAIAGVL AMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTVLVTHSMEDAARYAEKIVL MKAGTVLQIGTPREIFAKPDELVDLGLSVPDVVRFQGLFERKFDVKLTKTCLTIDELT TEMAPYLAKGGA" misc_feature complement(2686852..2687715) /gene="cbiO" /locus_tag="lmo2600" /note="cobalt transporter ATP-binding subunit; Provisional; Region: cbiO; PRK13634" /db_xref="CDD:237454" regulatory complement(2686857..2686862) /regulatory_class="ribosome_binding_site" /gene="cbiO" /locus_tag="lmo2600" gene complement(2687691..2688530) /gene="cbiO" /locus_tag="lmo2601" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987213" CDS complement(2687691..2688530) /gene="cbiO" /locus_tag="lmo2601" /experiment="EXISTENCE:[PMID:19448609]" /note="with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene" /codon_start=1 /transl_table=11 /product="cobalt ABC transporter ATP-binding protein" /protein_id="NP_466124.1" /db_xref="GeneID:987213" /translation="MAESFVRLEHVFYKYEDTEKYAVKDVSISAQKGEWVALVGHNGS GKSTIAKLLNGLLFPEDGLIKIGHFVLSEKNIWEIRRQVGMVFQNPDNQFVGATVQDD VAFGLENHGVPHDTMVERVESALNEVGMQSYALHEPARLSGGQKQRVAIAGVLALQPD VIILDEATSMLDPRGRAEVMETIRIMREQEDITVISITHDLDEVLFADRVIVMNKGEI HSEGTPKEIFQQADAMREIGLGVPFIIELQEKLVAGGFETGSTVLSEGALLDQLWKLN SNN" misc_feature complement(2687694..2688530) /gene="cbiO" /locus_tag="lmo2601" /note="energy-coupling factor ABC transporter ATP-binding protein; Region: cbiO; PRK13635" /db_xref="CDD:184195" regulatory complement(2687730..2687735) /regulatory_class="ribosome_binding_site" /gene="cbiO" /locus_tag="lmo2601" regulatory complement(2688539..2688544) /regulatory_class="ribosome_binding_site" regulatory 2688647..2688652 /regulatory_class="ribosome_binding_site" gene 2688661..2689323 /locus_tag="lmo2602" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987211" CDS 2688661..2689323 /locus_tag="lmo2602" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466125.1" /db_xref="GeneID:987211" /translation="MLADFILRLVVAGLLGAIIGLDREIRAKEAGFRTHFLVSLGSAL IMIVSQYGFSQIATMQNVSFDPSRVAAQVVSGIGFIGAGTIIIQKKFVRGLTTAAGLW ATAGIGLAIGAGMYWVGIAATLLTLIGLEFLSIIFKSFAFHTTAIIYSTDKQENLVKV TDQIKQNKQQIVSYSSEKELIGESLFIRVNIVVKTKNKNDEYELFHFIQTLPNVTVEK ME" misc_feature 2688664..2689197 /locus_tag="lmo2602" /note="Magnesium uptake protein YhiD/SapB, involved in acid resistance [Inorganic ion transport and metabolism]; Region: SapB; COG1285" /db_xref="CDD:440896" regulatory 2689430..2689435 /regulatory_class="ribosome_binding_site" gene 2689442..2690332 /locus_tag="lmo2603" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987210" CDS 2689442..2690332 /locus_tag="lmo2603" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2603" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466126.1" /db_xref="GeneID:987210" /translation="MKNFVTSERSIFEMEKSTEPAIRVKDGSVVKIKTKDHFNGQIHA KQLHYGELDWKQFSPTTGPIYIEEARPGDLLAITIEKIELLGTEVFLLNGPNIGITDD LLTSNSTRCYKVENNQIIYSEDIHIPIRKTIGLLKTEELNPSKVPTKNGGLLDSSKIT EGATIFLPVEKYGASLHVGNVRATTGFGKITATSAEAPAEVTLRLQILKNRTAPTPTI IHYHNLICLASDITIEKATQKTMHNMITLLTESDKMTTEDALFLISLQADFQVCKLCK PNITTSIKLPLDYFPEMPFL" misc_feature 2689457..2690323 /locus_tag="lmo2603" /note="Acetamidase/formamidase [Energy production and conversion]; Region: FmdA; COG2421" /db_xref="CDD:441971" regulatory complement(2690331..2690364) /regulatory_class="terminator" regulatory 2690342..2690375 /regulatory_class="terminator" gene complement(2690371..2691465) /locus_tag="lmo2604" /db_xref="GeneID:987206" CDS complement(2690371..2691465) /locus_tag="lmo2604" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2604" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466127.1" /db_xref="GeneID:987206" /translation="MRPLTDSQIAQNRLHNSGLLQSKFPTAEEATRALFGIQSQYQQF GEISLFNRVDNLTKENLQITYDKKDLIKIWGQRMTVHMYAPDDWFYVHDVYAHKNNWS RKHTDSLGHDLDDLLAEMEELLLRDEKVPKEAFGALFGDHAKELMTWGGVFIQGSLDG KLFCVPESPKTRFYSHRSRIDSKSHEEWLNIERNQTGLETMIDRYFSAYGPATIQDFK HWSGLRNSEYMTTLEKQLENYFCYIGEDGKTYYSKTETHDEQEMDTPLLLGKFDPLFV SYAKKNWLANEKETSLIWRIAGQIEAVLIINGQFFGTWRYKVSGEKIIFNFYLSKKLT KKSQKIVEIEAMKLAGFLHKKYQGSIFELI" misc_feature complement(2690413..2691372) /locus_tag="lmo2604" /note="Winged helix DNA-binding domain; Region: HTH_42; cl19833" /db_xref="CDD:473220" regulatory complement(2691473..2691478) /regulatory_class="ribosome_binding_site" regulatory complement(2691556..2691609) /regulatory_class="terminator" gene complement(2691673..2692080) /gene="rplQ" /locus_tag="lmo2605" /db_xref="GeneID:987205" CDS complement(2691673..2692080) /gene="rplQ" /locus_tag="lmo2605" /experiment="EXISTENCE:[PMID:19448609]" /note="is a component of the macrolide binding site in the peptidyl transferase center" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L17" /protein_id="NP_466128.1" /db_xref="GeneID:987205" /translation="MGYRKLGRTSSQRKALLRDLATDLIVFERIETTEARAKEIRKVV EKLITSGKKGDLHARRQAAAFIRHEVVEVVQVDAKGKDGSTVKKNRPVYALQKLFDDV APRYAERQGGYTRILKKGPRRGDGAPMVIIELV" misc_feature complement(2691676..2692080) /gene="rplQ" /locus_tag="lmo2605" /note="Ribosomal protein L17 [Translation, ribosomal structure and biogenesis]; Region: RplQ; COG0203" /db_xref="CDD:439973" regulatory complement(2692088..2692093) /regulatory_class="ribosome_binding_site" gene complement(2692097..2693041) /gene="rpoA" /locus_tag="lmo2606" /db_xref="GeneID:984700" CDS complement(2692097..2693041) /gene="rpoA" /locus_tag="lmo2606" /EC_number="2.7.7.6" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit alpha" /protein_id="NP_466129.1" /db_xref="GeneID:984700" /translation="MIEIEKPKIETIEISDDAKYGKFVVEPLERGYGTTLGNSLRRIL LSSLPGAAVTSIQIDGALHEFSVIEGVVEDVTTMILNIKKLALKIYSDEEKTLEIDMQ GPGVVTAADINYDSDVEILNPDLHIATLSDNAKFHVRLNATRGRGYTPADQNKRENMP IGVLPVDSIFSPVIRVNYQVENTRVGQSTNYDKLTFDVLTDGSISPEEAVSLGAKILS EHLSIFVNLTDEAQKAEIMIEKEESHKEKVLEMTIEELDLSVRSYNCLKRAGINTVQE LADKSEDDMMKVRNLGRKSLEEVKVKLADLGLSLRNEN" misc_feature complement(2692109..2693038) /gene="rpoA" /locus_tag="lmo2606" /note="DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Transcription]; Region: RpoA; COG0202" /db_xref="CDD:439972" regulatory complement(2693052..2693057) /regulatory_class="ribosome_binding_site" gene complement(2693151..2693540) /gene="rpsK" /locus_tag="lmo2607" /db_xref="GeneID:985385" CDS complement(2693151..2693540) /gene="rpsK" /locus_tag="lmo2607" /experiment="EXISTENCE:[PMID:19448609]" /note="located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S11" /protein_id="NP_466130.1" /db_xref="GeneID:985385" /translation="MARKTNTRKRRVKKNIESGIAHIRSTFNNTIVMITDTHGNALAW SSAGSLGFKGSRKSTPFAAQMAAESAAKSAQEHGLKTLEVTVKGPGSGREAAIRALQA AGLEVTAIKDVTPVPHNGCRPPKRRRV" misc_feature complement(2693154..2693537) /gene="rpsK" /locus_tag="lmo2607" /note="30S ribosomal protein S11; Validated; Region: PRK05309" /db_xref="CDD:180007" regulatory complement(2693551..2693556) /regulatory_class="ribosome_binding_site" gene complement(2693563..2693928) /gene="rpsM" /locus_tag="lmo2608" /db_xref="GeneID:984551" CDS complement(2693563..2693928) /gene="rpsM" /locus_tag="lmo2608" /experiment="EXISTENCE:[PMID:19448609]" /note="located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S13" /protein_id="NP_466131.1" /db_xref="GeneID:984551" /translation="MARIAGVDVPREKRIVISLTYIYGIGKQTAKEVLAEAGVSEDTR TRDLTEEELGKIREILDRIKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNT KNNARTRKGPSKTVAGKKK" misc_feature complement(2693566..2693928) /gene="rpsM" /locus_tag="lmo2608" /note="30S ribosomal protein S13; Validated; Region: rpsM; PRK05179" /db_xref="CDD:235358" regulatory complement(2693940..2693945) /regulatory_class="ribosome_binding_site" gene complement(2693947..2694060) /gene="rpmJ" /locus_tag="lmo2609" /db_xref="GeneID:985422" CDS complement(2693947..2694060) /gene="rpmJ" /locus_tag="lmo2609" /experiment="EXISTENCE:[PMID:19448609]" /note="smallest protein in the large subunit; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L36" /protein_id="NP_466132.1" /db_xref="GeneID:985422" /translation="MKVRPSVKPMCEKCKVIRRKGKVMVICENPKHKQKQG" misc_feature complement(2693950..2694060) /gene="rpmJ" /locus_tag="lmo2609" /note="50S ribosomal protein L36; Reviewed; Region: rpmJ; PRK00465" /db_xref="CDD:179039" regulatory complement(2694070..2694075) /regulatory_class="ribosome_binding_site" gene complement(2694164..2694382) /gene="infA" /locus_tag="lmo2610" /db_xref="GeneID:984951" CDS complement(2694164..2694382) /gene="infA" /locus_tag="lmo2610" /experiment="EXISTENCE:[PMID:19448609]" /note="stimulates the activities of the other two initiation factors, IF-2 and IF-3" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-1" /protein_id="NP_466133.1" /db_xref="GeneID:984951" /translation="MAKEDVIEVEGVVQETLPNAMFNVELENGHKVLATVSGKIRMHY IRILPGDKVTVELSPYDLTRGRITYRFK" misc_feature complement(2694167..2694382) /gene="infA" /locus_tag="lmo2610" /note="translation initiation factor IF-1; Validated; Region: infA; PRK00276" /db_xref="CDD:178954" misc_feature complement(order(2694185..2694187,2694191..2694193, 2694242..2694253,2694266..2694271,2694278..2694280, 2694314..2694316,2694332..2694340)) /gene="infA" /locus_tag="lmo2610" /note="rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:239898" misc_feature complement(order(2694173..2694175,2694266..2694268, 2694278..2694280)) /gene="infA" /locus_tag="lmo2610" /note="predicted 30S ribosome binding site [active]" /db_xref="CDD:239898" regulatory complement(2694393..2694398) /regulatory_class="ribosome_binding_site" gene complement(2694769..2695416) /gene="adk" /locus_tag="lmo2611" /db_xref="GeneID:984533" CDS complement(2694769..2695416) /gene="adk" /locus_tag="lmo2611" /experiment="EXISTENCE:[PMID:19448609]" /note="essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP" /codon_start=1 /transl_table=11 /product="adenylate kinase" /protein_id="NP_466134.1" /db_xref="GeneID:984533" /translation="MKLVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTE LGRKAKSFMDNGDLVPDEVTNGIVRERLSEDDAKDGFLLDGFPRTVEQAQELENILSD LGTELDAVINIDVEKDVLMKRLTGRWICRTCGKTYHEIYNPPKVPGKCDLDGGELYQR DDDKKETVEKRLNVNMKQTKPLLDFYSEKGKLHNINGEQEIKDVFVDVEKILASF" misc_feature complement(2694772..2695416) /gene="adk" /locus_tag="lmo2611" /note="adenylate kinase; Reviewed; Region: adk; PRK00279" /db_xref="CDD:234711" regulatory complement(2695425..2695430) /regulatory_class="ribosome_binding_site" gene complement(2695476..2696771) /gene="secY" /locus_tag="lmo2612" /db_xref="GeneID:984663" CDS complement(2695476..2696771) /gene="secY" /locus_tag="lmo2612" /experiment="EXISTENCE:[PMID:19448609]" /note="forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecY" /protein_id="NP_466135.1" /db_xref="GeneID:984663" /translation="MFQTLVNFFKVADIRKKILFTLAMLVIFRIGTFVPVPGVNAAAL QSSMDGGILGFLNTFNGGALKNFSIFAMGVMPYITSSIIVQLLQMDVVPKLTEWSKQG EMGRKKLNQLTRYMTIGLGLVEAFGMAYGFNRMSSAGLVIEPSIGRYAIIAIVLTTGT MFLMWLGEQITVKGVGNGVSIIIFAGIVARIPDGVRQLYVSQIENAGDQLFLHVLTLV GVGVAILAIVVAVIFFQQALRKIPIQYSKRVAGAKQSGAQATHLPLKLNSAGVIPVIF ASAFIITPQTILTFFDQSNDVVKVLKDVFDYTKPIGMILYVALIVAFTYFYAFIQVNP EKVADNLKKQGGYIPSKRPGRETQAYLTSVLYRLTFVGAIFLSAVAILPTIGTTVFSL PQSLAVGGTSLLIVIGVALDTTKQLEGQLVKRNYRGFIK" misc_feature complement(2695479..2696771) /gene="secY" /locus_tag="lmo2612" /note="Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport]; Region: SecY; COG0201" /db_xref="CDD:439971" gene complement(2696771..2697211) /gene="rplO" /locus_tag="lmo2613" /db_xref="GeneID:987200" CDS complement(2696771..2697211) /gene="rplO" /locus_tag="lmo2613" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L15" /protein_id="NP_466136.1" /db_xref="GeneID:987200" /translation="MKLHELKPSEGSRKERNRVGRGTGSGNGKTSGRGHKGQKARSGG GVRLGFEGGQLPLFRRIPKRGFTNINRKEFAIVNLDVLNRFEDGTEVTPELLVETGII RNEKSGIKILSNGNIEKKLTVKANKFSAAAKEAIEAAGGKTEVI" misc_feature complement(2696774..2697211) /gene="rplO" /locus_tag="lmo2613" /note="Ribosomal protein L15 [Translation, ribosomal structure and biogenesis]; Region: RplO; COG0200" /db_xref="CDD:439970" regulatory complement(2696779..2696784) /regulatory_class="ribosome_binding_site" /gene="rplO" /locus_tag="lmo2613" regulatory complement(2697220..2697225) /regulatory_class="ribosome_binding_site" gene complement(2697267..2697446) /gene="rpmD" /locus_tag="lmo2614" /db_xref="GeneID:987199" CDS complement(2697267..2697446) /gene="rpmD" /locus_tag="lmo2614" /experiment="EXISTENCE:[PMID:19448609]" /note="L30 binds domain II of the 23S rRNA and the 5S rRNA" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L30" /protein_id="NP_466137.1" /db_xref="GeneID:987199" /translation="MAKLEITLKRSLIGRPQPQRKTVQALGLGKTNSVVVKEDNPAIR GMITKVSHLVDVKEV" misc_feature complement(2697270..2697446) /gene="rpmD" /locus_tag="lmo2614" /note="50S ribosomal protein L30; Reviewed; Region: rpmD; PRK05611" /db_xref="CDD:180163" misc_feature complement(order(2697309..2697314,2697318..2697326, 2697333..2697338,2697351..2697353,2697360..2697362, 2697366..2697374,2697381..2697386,2697393..2697401, 2697405..2697410,2697414..2697419)) /gene="rpmD" /locus_tag="lmo2614" /note="23S rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:100100" regulatory complement(2697458..2697463) /regulatory_class="ribosome_binding_site" gene complement(2697463..2697966) /gene="rpsE" /locus_tag="lmo2615" /db_xref="GeneID:987198" CDS complement(2697463..2697966) /gene="rpsE" /locus_tag="lmo2615" /experiment="EXISTENCE:[PMID:19448609]" /note="located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S5" /protein_id="NP_466138.1" /db_xref="GeneID:987198" /translation="MPEQIDGNKLDLEERVVTINRVAKVVKGGRRFRFTALVVVGDKN GHVGFGTGKAQEVPDAIRKAVEDAKKNMVLVPTVDTTIPHTVVGHFGGGEILLKPASA GSGVTAGGPVRAVLELAGVADVSSKSLGSNTPINMVRATIDGIKQLKNAEDVAKLRGK TVEELLG" misc_feature complement(2697466..2697960) /gene="rpsE" /locus_tag="lmo2615" /note="30S ribosomal protein S5; Validated; Region: rpsE; PRK00550" /db_xref="CDD:234790" regulatory complement(2697977..2697982) /regulatory_class="ribosome_binding_site" gene complement(2697988..2698347) /gene="rplR" /locus_tag="lmo2616" /db_xref="GeneID:987197" CDS complement(2697988..2698347) /gene="rplR" /locus_tag="lmo2616" /experiment="EXISTENCE:[PMID:19448609]" /note="binds 5S rRNA along with protein L5 and L25" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L18" /protein_id="NP_466139.1" /db_xref="GeneID:987197" /translation="MITKIDKNKVRKKRHARVRSKISGTESRPRLNVFRSNKNIYAQI IDDVNGVTLASASNLDKDFGSAESKVDAASKVGELVAKRASEKGITSVTFDRGGYLYH GRVKALAEAARENGLEF" misc_feature complement(2697991..2698338) /gene="rplR" /locus_tag="lmo2616" /note="Ribosomal protein L18 [Translation, ribosomal structure and biogenesis]; Region: RplR; COG0256" /db_xref="CDD:440026" regulatory complement(2698356..2698361) /regulatory_class="ribosome_binding_site" gene complement(2698387..2698923) /gene="rplF" /locus_tag="lmo2617" /db_xref="GeneID:987196" CDS complement(2698387..2698923) /gene="rplF" /locus_tag="lmo2617" /experiment="EXISTENCE:[PMID:19448609]" /note="ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L6" /protein_id="NP_466140.1" /db_xref="GeneID:987196" /translation="MSRIGKKTIVIPAGVTVTLNGSTATVKGPKGELVKEFNPEITIK IEGNEINVSRPTDNKNHRALHGTTRAILNNMVVGVSEGYEKKLELIGVGYRAQKQGDK LVLNVGYSHPVEFVAPKGVDIEVPANTQVIVKGYNKEHVGELAANIRAVRPPEPYKGK GIRYEGEHVRRKEGKTGK" misc_feature complement(2698390..2698920) /gene="rplF" /locus_tag="lmo2617" /note="Ribosomal protein L6P/L9E [Translation, ribosomal structure and biogenesis]; Region: RplF; COG0097" /db_xref="CDD:439867" regulatory complement(2698932..2698937) /regulatory_class="ribosome_binding_site" gene complement(2698954..2699352) /gene="rpsH" /locus_tag="lmo2618" /db_xref="GeneID:987195" CDS complement(2698954..2699352) /gene="rpsH" /locus_tag="lmo2618" /experiment="EXISTENCE:[PMID:19448609]" /note="binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S8" /protein_id="NP_466141.1" /db_xref="GeneID:987195" /translation="MVMTDPIADFLTRIRNANMVKHDKLELPASKIKKEIAEILKREG FIRDVEYIEDDNAGTIRVFLKYGATGERVITGLKRISKPGLRVYAKSTEVPKVLNGLG IAIVSTSQGVLTDKEARAKQVGGEVLAYVW" misc_feature complement(2698957..2699349) /gene="rpsH" /locus_tag="lmo2618" /note="30S ribosomal protein S8; Validated; Region: rpsH; PRK00136" /db_xref="CDD:234658" regulatory complement(2699362..2699367) /regulatory_class="ribosome_binding_site" gene complement(2699383..2699568) /gene="rpsN" /locus_tag="lmo2619" /db_xref="GeneID:987193" CDS complement(2699383..2699568) /gene="rpsN" /locus_tag="lmo2619" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S14" /protein_id="NP_466142.1" /db_xref="GeneID:987193" /translation="MAKKSMIAKQKRTPKYAVQAYTRCERCGRPHSVIRKFKLCRICF RELAYKGQIPGVKKASW" misc_feature complement(2699386..2699568) /gene="rpsN" /locus_tag="lmo2619" /note="type Z 30S ribosomal protein S14; Region: rpsN; PRK08061" /db_xref="CDD:181216" regulatory complement(2699576..2699581) /regulatory_class="ribosome_binding_site" gene complement(2699600..2700139) /gene="rplE" /locus_tag="lmo2620" /db_xref="GeneID:987192" CDS complement(2699600..2700139) /gene="rplE" /locus_tag="lmo2620" /experiment="EXISTENCE:[PMID:19448609]" /note="part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L5" /protein_id="NP_466143.1" /db_xref="GeneID:987192" /translation="MNRLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDAT ANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDK LVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYDQVSKVRGMDVVIVTTA KSDEESHELLTQLGMPFQK" misc_feature complement(2699603..2700139) /gene="rplE" /locus_tag="lmo2620" /note="Ribosomal protein L5 [Translation, ribosomal structure and biogenesis]; Region: RplE; COG0094" /db_xref="CDD:439864" regulatory complement(2700149..2700154) /regulatory_class="ribosome_binding_site" gene complement(2700166..2700477) /gene="rplX" /locus_tag="lmo2621" /db_xref="GeneID:987191" CDS complement(2700166..2700477) /gene="rplX" /locus_tag="lmo2621" /experiment="EXISTENCE:[PMID:19448609]" /note="assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L24" /protein_id="NP_466144.1" /db_xref="GeneID:987191" /translation="MHVKKGDKVKVITGKDKGKSGKVLAAFPKKDRVLIEGINMVKKH TKPSNVNPQGGILNVEAPIHVSNVMLIDPKTGEPTRVGYEVKGDKKVRVAKKSGEVID K" misc_feature complement(2700175..2700477) /gene="rplX" /locus_tag="lmo2621" /note="Ribosomal protein L24 [Translation, ribosomal structure and biogenesis]; Region: RplX; COG0198" /db_xref="CDD:439968" regulatory complement(2700488..2700493) /regulatory_class="ribosome_binding_site" gene complement(2700515..2700883) /gene="rplN" /locus_tag="lmo2622" /db_xref="GeneID:987190" CDS complement(2700515..2700883) /gene="rplN" /locus_tag="lmo2622" /experiment="EXISTENCE:[PMID:19448609]" /note="binds to the 23S rRNA between the centers for peptidyl transferase and GTPase" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L14" /protein_id="NP_466145.1" /db_xref="GeneID:987190" /translation="MIQQESRMKVADNSGAREVLTIKVLGGSGRKTANIGDVVVCTVK QATPGGVVKKGEVVKAVIVRTKSGARRQDGSYIKFDENACVIIRDDKSPRGTRIFGPV ARELRENNFMKIVSLAPEVL" misc_feature complement(2700518..2700883) /gene="rplN" /locus_tag="lmo2622" /note="Ribosomal protein L14 [Translation, ribosomal structure and biogenesis]; Region: RplN; COG0093" /db_xref="CDD:439863" regulatory complement(2700892..2700897) /regulatory_class="ribosome_binding_site" gene complement(2700963..2701226) /gene="rpsQ" /locus_tag="lmo2623" /db_xref="GeneID:987189" CDS complement(2700963..2701226) /gene="rpsQ" /locus_tag="lmo2623" /experiment="EXISTENCE:[PMID:19448609]" /note="primary binding protein; helps mediate assembly; involved in translation fidelity" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S17" /protein_id="NP_466146.1" /db_xref="GeneID:987189" /translation="MADRNQRKVYTGRVVSDKMDKTITVVVETYKKHGLYGKRVKYSK KFKAHDENNIAKTGDVVRISETRPLSATKHFRLLEVVEEAVII" misc_feature complement(2700972..2701217) /gene="rpsQ" /locus_tag="lmo2623" /note="30S ribosomal protein S17; Reviewed; Region: rpsQ; PRK05610" /db_xref="CDD:235532" regulatory complement(2701236..2701241) /regulatory_class="ribosome_binding_site" gene complement(2701254..2701445) /gene="rpmC" /locus_tag="lmo2624" /db_xref="GeneID:987188" CDS complement(2701254..2701445) /gene="rpmC" /locus_tag="lmo2624" /experiment="EXISTENCE:[PMID:19448609]" /note="one of the stabilizing components for the large ribosomal subunit" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L29" /protein_id="NP_466147.1" /db_xref="GeneID:987188" /translation="MKANDIRDLSTTEIQDQEKALKEELFNLRFQLATGQLENTARIR EVRKAIARMKTIVRERELA" misc_feature complement(2701257..2701445) /gene="rpmC" /locus_tag="lmo2624" /note="Ribosomal protein L29 [Translation, ribosomal structure and biogenesis]; Region: RpmC; COG0255" /db_xref="CDD:440025" gene complement(2701435..2701869) /gene="rplP" /locus_tag="lmo2625" /db_xref="GeneID:985437" CDS complement(2701435..2701869) /gene="rplP" /locus_tag="lmo2625" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L16" /protein_id="NP_466148.1" /db_xref="GeneID:985437" /translation="MLVPKRVKYRREFRGNMRGRAKGGTEVAFGEYGLQAVEASWITN RQIEAARIAMTRYMKRGGKVWIKIFPHKSYTSKPIGVRMGKGKGAPEGWVSPVKRGKI MFEIAGVPEDVAREALRLAAHKLPVKTKIVKREEIGGEANES" misc_feature complement(2701462..2701869) /gene="rplP" /locus_tag="lmo2625" /note="Ribosomal protein L16/L10AE [Translation, ribosomal structure and biogenesis]; Region: RplP; COG0197" /db_xref="CDD:439967" regulatory complement(2701454..2701458) /regulatory_class="ribosome_binding_site" /gene="rplP" /locus_tag="lmo2625" gene complement(2701872..2702528) /gene="rpsC" /locus_tag="lmo2626" /db_xref="GeneID:987185" CDS complement(2701872..2702528) /gene="rpsC" /locus_tag="lmo2626" /experiment="EXISTENCE:[PMID:19448609]" /note="forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S3" /protein_id="NP_466149.1" /db_xref="GeneID:987185" /translation="MGQKVHPIGMRIGVIRDWDSKWYAEKDYADFLHEDLRIRDYVAK RLSDASVSRVEIERAANRVNITIHTAKPGMVIGKGGSEVEALRKNLNELTQKRVHINI VEIKRADLDAKLVAENIARQLEGRVSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGAD IARAEHYSEGTVPLHTLRADIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK " misc_feature complement(2701884..2702528) /gene="rpsC" /locus_tag="lmo2626" /note="Ribosomal protein S3 [Translation, ribosomal structure and biogenesis]; Region: RpsC; COG0092" /db_xref="CDD:439862" regulatory complement(2701879..2701884) /regulatory_class="ribosome_binding_site" /gene="rpsC" /locus_tag="lmo2626" gene complement(2702532..2702888) /gene="rplV" /locus_tag="lmo2627" /db_xref="GeneID:985550" CDS complement(2702532..2702888) /gene="rplV" /locus_tag="lmo2627" /experiment="EXISTENCE:[PMID:19448609]" /note="binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L22" /protein_id="NP_466150.1" /db_xref="GeneID:985550" /translation="MASEVTSAKAVAKTVRIAPRKARIVIDLIRGKQVGEAIAILKYT PRSASPIIEKVLKSAIANAEHNYDLDINNLVVEEAFVDEGPTLKRFRPRAQGRASAIN KRTSHITVVVSEVKEG" misc_feature complement(2702544..2702873) /gene="rplV" /locus_tag="lmo2627" /note="Ribosomal protein L22 [Translation, ribosomal structure and biogenesis]; Region: RplV; COG0091" /db_xref="CDD:439861" regulatory complement(2702537..2702542) /regulatory_class="ribosome_binding_site" /gene="rplV" /locus_tag="lmo2627" regulatory complement(2702897..2702902) /regulatory_class="ribosome_binding_site" gene complement(2702909..2703187) /gene="rpsS" /locus_tag="lmo2628" /db_xref="GeneID:984385" CDS complement(2702909..2703187) /gene="rpsS" /locus_tag="lmo2628" /experiment="EXISTENCE:[PMID:19448609]" /note="protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S19" /protein_id="NP_466151.1" /db_xref="GeneID:984385" /translation="MGRSLKKGPFVDDHLMKKVEAAAESEKKQVIKTWSRRSTIFPTF VGQTIAVYDGRKHVPVYVQEDMVGHKLGEFAPTRTYRGHAGDDKKTKR" misc_feature complement(2702912..2703187) /gene="rpsS" /locus_tag="lmo2628" /note="30S ribosomal protein S19; Reviewed; Region: rpsS; PRK00357" /db_xref="CDD:178985" regulatory complement(2703195..2703200) /regulatory_class="ribosome_binding_site" gene complement(2703275..2704108) /gene="rplB" /locus_tag="lmo2629" /db_xref="GeneID:985132" CDS complement(2703275..2704108) /gene="rplB" /locus_tag="lmo2629" /experiment="EXISTENCE:[PMID:19448609]" /note="one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L2" /protein_id="NP_466152.1" /db_xref="GeneID:985132" /translation="MAIKKYKPTTNGRRHMTSSDFAEITTSTPEKSLLRPLKKKAGRN NQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADGEKR YIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGT SAQVLGKEGKYVLIRLNSGEVRMILATCRATIGQVGNEQHELINIGKAGRSRWMGKRP TVRGSVMNPNDHPHGGGEGKAPIGRKSPMSPWGKPTLGYKTRKKNNNSDKFIVRRRKK K" misc_feature complement(2703278..2704108) /gene="rplB" /locus_tag="lmo2629" /note="Ribosomal protein L2 [Translation, ribosomal structure and biogenesis]; Region: RplB; COG0090" /db_xref="CDD:439860" regulatory complement(2704116..2704121) /regulatory_class="ribosome_binding_site" gene complement(2704149..2704433) /gene="rplW" /locus_tag="lmo2630" /db_xref="GeneID:984375" CDS complement(2704149..2704433) /gene="rplW" /locus_tag="lmo2630" /experiment="EXISTENCE:[PMID:19448609]" /note="binds third domain of 23S rRNA and protein L29; part of exit tunnel" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L23" /protein_id="NP_466153.1" /db_xref="GeneID:984375" /translation="MDARDIIKRPVVTEESTSILDDKKYTFEVDTRATKTQVKYAVEE IFDVKVAKVNVMNYKGKLKRMGRYAGYTNKRRKAIVTVTADSKEIQFFEV" misc_feature complement(2704155..2704424) /gene="rplW" /locus_tag="lmo2630" /note="50S ribosomal protein L23; Reviewed; Region: rplW; PRK05738" /db_xref="CDD:235586" gene complement(2704433..2705056) /gene="rplD" /locus_tag="lmo2631" /db_xref="GeneID:987182" CDS complement(2704433..2705056) /gene="rplD" /locus_tag="lmo2631" /experiment="EXISTENCE:[PMID:19448609]" /note="L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L4" /protein_id="NP_466154.1" /db_xref="GeneID:987182" /translation="MPKLSLLKQDGTNAGEITLNDTVFGIEPNEKVVVDVILSQRASL RQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLP KKVRRLAIKSILSSKVNEEKLVVLEGLTFDAPKTKEFAAFLKNISVDTKALIVVAGES ENVELSARNLQGITVIPAESISVLEVAKHDKLIITKAAVEKVEEVLA" misc_feature complement(2704436..2705053) /gene="rplD" /locus_tag="lmo2631" /note="Ribosomal protein L4 [Translation, ribosomal structure and biogenesis]; Region: RplD; COG0088" /db_xref="CDD:439858" regulatory complement(2704444..2704449) /regulatory_class="ribosome_binding_site" /gene="rplD" /locus_tag="lmo2631" regulatory complement(2705065..2705070) /regulatory_class="ribosome_binding_site" gene complement(2705082..2705711) /gene="rplC" /locus_tag="lmo2632" /db_xref="GeneID:987181" CDS complement(2705082..2705711) /gene="rplC" /locus_tag="lmo2632" /experiment="EXISTENCE:[PMID:19448609]" /note="binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L3" /protein_id="NP_466155.1" /db_xref="GeneID:987181" /translation="MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETD GYEAVQIGFEDKRAILSNKPEQGHVAKANTTPKRFIREFRDVNLDEYEIGAEVKVDVF AEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKLL PGRMGGEQITIQNLEIVKVDVEKNVLLVKGNVPGAKKALVQIKTATKAK" misc_feature complement(2705085..2705711) /gene="rplC" /locus_tag="lmo2632" /note="Ribosomal protein L3 [Translation, ribosomal structure and biogenesis]; Region: RplC; COG0087" /db_xref="CDD:439857" regulatory complement(2705720..2705725) /regulatory_class="ribosome_binding_site" gene complement(2705746..2706054) /gene="rpsJ" /locus_tag="lmo2633" /gene_synonym="nusE" /db_xref="GeneID:987179" CDS complement(2705746..2706054) /gene="rpsJ" /locus_tag="lmo2633" /gene_synonym="nusE" /experiment="EXISTENCE:[PMID:19448609]" /note="NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S10" /protein_id="NP_466156.1" /db_xref="GeneID:987179" /translation="MAKQKIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPT EKSIYTVLRAVHKYKDSREQFEMRTHKRLIDIVNPTPQTVDSLMRLDLPSGVDIEIKL " misc_feature complement(2705749..2706054) /gene="rpsJ" /locus_tag="lmo2633" /gene_synonym="nusE" /note="30S ribosomal protein S10; Reviewed; Region: rpsJ; PRK00596" /db_xref="CDD:179076" regulatory complement(2706062..2706067) /regulatory_class="ribosome_binding_site" gene complement(2706415..2707215) /locus_tag="lmo2634" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987178" CDS complement(2706415..2707215) /locus_tag="lmo2634" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466157.1" /db_xref="GeneID:987178" /translation="MIEKLILGRFVPGESLIHGLDARTKLLAGFYYIGILFLANNWWT YALMVLFTLMVVQMTGIKLKVFIKGVKPLIWLILFTVVMQILFASGGTIYFDWGPFTI SSFGLLNGVFVFLRFVLIIIMSTVITLTTTPMNLTDAIAYILRPFAVLKVPVNDIALM ISVALRFIPTLMGETDKIMKAQRARGVDFGEGNLFEQMKVVVPIFIPLFVSSFNRAEE LADAMEARGYQGGEGRTRFRILHWHLGDLIAACVMILLTAGLVILRTS" misc_feature complement(2706427..2707200) /locus_tag="lmo2634" /note="ECF-type transporter transmembrane protein EcfT [Coenzyme transport and metabolism]; Region: EcfT; COG0619" /db_xref="CDD:440384" misc_feature complement(order(2706520..2706522,2706526..2706528, 2706544..2706549,2706556..2706558,2706568..2706573, 2706577..2706582,2706586..2706594,2706598..2706606, 2706610..2706615,2706688..2706693,2706700..2706705, 2706712..2706717,2706721..2706729,2706733..2706738, 2706748..2706750,2706817..2706819,2706832..2706837, 2706844..2706846,2706865..2706867,2706877..2706879, 2706967..2706969,2706976..2706981,2706991..2706993, 2707105..2707110,2707117..2707122,2707126..2707131)) /locus_tag="lmo2634" /note="S component interface [polypeptide binding]; other site" /db_xref="CDD:410987" misc_feature complement(order(2706505..2706507,2706511..2706513, 2706523..2706531,2706538..2706555,2706559..2706564, 2706571..2706573,2706706..2706711,2706715..2706720, 2706727..2706729,2706739..2706741)) /locus_tag="lmo2634" /note="A' component interface [polypeptide binding]; other site" /db_xref="CDD:410987" misc_feature complement(order(2706586..2706588,2706595..2706600, 2706607..2706609,2706655..2706678)) /locus_tag="lmo2634" /note="A component interface [polypeptide binding]; other site" /db_xref="CDD:410987" regulatory complement(2707225..2707230) /regulatory_class="ribosome_binding_site" gene complement(2707235..2708194) /locus_tag="lmo2635" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987177" CDS complement(2707235..2708194) /locus_tag="lmo2635" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate" /codon_start=1 /transl_table=11 /product="1,4-dihydroxy-2-naphthoate octaprenyltransferase" /protein_id="NP_466158.1" /db_xref="GeneID:987177" /translation="MSIPSFLKLVEIQTKIASVFPFMLGTLFVVYQYDMFKPINTLII FGSMLIFDLTTTAINNYMDYRKATDNHDYDYRTTSNVIGQEQIPVRTVIITIFLMFFI ATGLGVWLVFRTDLLVLLIGFVCFCIGILYTFGPVPLSRMPLGEIFSGVTMGFGIFFL AVYVNAYDAGIANLLWQGEMVTIQFNLIEIIRIGVVSLPCIFTIANIMLANNLCDLDE DIRNHRYTLPYYIGRKMGVLLFNTLYYASFLAVVVSVAINFLHPIMLLSLITIYPVYR NLVKFNKEQVKSKTFVIGIRNFVLINATLTILMAVSVVLQQLT" misc_feature complement(2707238..2708194) /locus_tag="lmo2635" /note="1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional; Region: PRK13387" /db_xref="CDD:237373" regulatory complement(2708207..2708212) /regulatory_class="ribosome_binding_site" gene complement(2708276..2709358) /locus_tag="lmo2636" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987176" CDS complement(2708276..2709358) /locus_tag="lmo2636" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466159.1" /db_xref="GeneID:987176" /translation="MKKWKIIISVIILALVVSACGNSSKETKSEPSDSKKLMDQPYSK TDFLMGTVVTLKIYDKGKEDVLDKGFDRIKDLAAKITTSDSEKTSEVDKINEQAGKKP VKVSEDVYYLIQEGLKYSENSGGSFDITIGPLTSLWHIGFSDARKPSQAEIDAVLPLI NYKDVKMNDKDQTVYLEKEGMELDLGAIAKGFITDETLKVFKENKVTTSIIDLGGNIY VQGNNPNGNKWNVGIQDPFSPRGSVIGKLPESNMSIVTSGIYERYLEVDGKTYHHILD PKTGYPFDNDIAGVSIVSKKSIDGDGLSTATFSKGIKGGMDYIEQFEGVDAIFISKEK KVYETSGLKGQFELTDKDFQMDTLKK" misc_feature complement(<2709254..2709358) /locus_tag="lmo2636" /note="Outer membrane protein assembly factor BamD, BamD/ComL family [Cell wall/membrane/envelope biogenesis]; Region: BamD; COG4105" /db_xref="CDD:443281" misc_feature complement(2708333..2709214) /locus_tag="lmo2636" /note="FAD:protein FMN transferase ApbE [Coenzyme transport and metabolism, Posttranslational modification, protein turnover, chaperones]; Region: ApbE; COG1477" /db_xref="CDD:441086" regulatory complement(2709368..2709374) /regulatory_class="ribosome_binding_site" regulatory complement(2709459..2709499) /regulatory_class="terminator" gene complement(2709522..2710421) /locus_tag="lmo2637" /db_xref="GeneID:987175" CDS complement(2709522..2710421) /locus_tag="lmo2637" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466160.1" /db_xref="GeneID:987175" /translation="MKLKKVAMGITVVMASSLLLVGCGSSDDSSKDKKSTDTKQTETK KTAKTDGTMTDGTYKLEEKNFDDKGWKGFMSIEVKDGKITKANYDYKNKDGKLKSEDA DYEKAMKDKVGTGPQEYLKQLSDSLVKNQSAASVEVVSGATHSSDAFINYANQLIQAA QKADTTTISINNLAKMEDGTYKLEEQNYAHGYRVVFSMDVKDGKITKSDYNYVDKDGK LKSDDADYEKNMKAKSGTGPKEYIPALNKSLVEKQDVAAVDTVSGATNSSNQFKIYAA QLQNAAQNGNTDTIKVYNLVEAE" misc_feature complement(2709939..2710271) /locus_tag="lmo2637" /note="Membrane-anchored lipoprotein Tpp15, major membrane immunogen [Function unknown]; Region: Tpp15; COG4939" /db_xref="CDD:443966" misc_feature complement(2709573..2709914) /locus_tag="lmo2637" /note="Membrane-anchored lipoprotein Tpp15, major membrane immunogen [Function unknown]; Region: Tpp15; COG4939" /db_xref="CDD:443966" regulatory complement(2710427..2710432) /regulatory_class="ribosome_binding_site" regulatory 2710857..2710862 /regulatory_class="ribosome_binding_site" gene 2710869..2712755 /locus_tag="lmo2638" /db_xref="GeneID:986300" CDS 2710869..2712755 /locus_tag="lmo2638" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase" /protein_id="NP_466161.1" /db_xref="GeneID:986300" /translation="MPEKNIVLIGAGYAGVHAAKKLAKKYKKDKDVNITLIDRHSYHT MMTELHEVAGGRVEPTAIQYDLRRLFNRTKVNLVTDNVTHVDHDKKVVTTEHGSYPFD YLVLGMGGEPNDFGTPGVGENGFTLWSWEDSVKLRNHIEETVTKASREQDVEKRKAML TFVVCGSGFTGIEMVGELLEWKDRLAKDNKIDASEIKLVVVEAAPTILNMLERRDADK AERYMVKKGIEIMKNAAIVEVKPESIVLKSGEELPTSTLIWTAGVRANSDTKDYGMES ARAGRLKVNQYMEAEGLKDVYVVGDLAYFEDEEGKPTPQIVEGAEQTALTAAKSIIVE MSGTGEKEPFQGKYHGVMVSIGAKYGVAHLGGMHLSGWFAILMKHMVNLYYFFGIRSG YYMWQYIMHEFFHIKDHRNIFRGWTSRYGNVLWVLPLRVYLGWFWIDEALSKIYGETT WDKVSITNLKPLFNGIGSDSWLTATTSKMPFEWLQTAATSGASQAAGDAAGAAATNVT TPILSHMPGWFQWIMELLMPNLDVALVMQKVVPFVELAIGLAMVVGLFTWLVSIGSAG FLVMFTLSAMLGWDKFWALPASIALLNGAGRTFGLDYWAVPWFQKHLGHWWYGKPRSV YRDK" misc_feature 2710878..2712038 /locus_tag="lmo2638" /note="NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; Region: Ndh; COG1252" /db_xref="CDD:440864" misc_feature <2712402..2712680 /locus_tag="lmo2638" /note="Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown]; Region: DoxX; COG2259" /db_xref="CDD:441860" regulatory 2712918..2712923 /regulatory_class="ribosome_binding_site" gene 2712931..2713365 /locus_tag="lmo2639" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984401" CDS 2712931..2713365 /locus_tag="lmo2639" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2639" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466162.1" /db_xref="GeneID:984401" /translation="MKKYLSMVKRWDIIIILSLCILSFLPIAIFSYVKANEPAPANGK KELVAVISVDNKEYKTVTLTGHKGTESFDVKQPDGHTNTIEVSGEEIRISKANCNDQV CVRTGAIDKQGDTVVCLPHKLVIEVKASDGSSGDSDDPIISS" misc_feature 2712949..2713314 /locus_tag="lmo2639" /note="Uncharacterized conserved protein [Function unknown]; Region: COG5341" /db_xref="CDD:444125" regulatory 2713384..2713389 /regulatory_class="ribosome_binding_site" gene 2713398..2713940 /locus_tag="lmo2640" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984437" CDS 2713398..2713940 /locus_tag="lmo2640" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2640" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466163.1" /db_xref="GeneID:984437" /translation="MTKNRRLVYIALLAAQAVVISLLERAIPFPFAFAPGAKLGLANI ITCISLYTLSAKDTFMIICIRLVLSTLLGGTISTFMYSAAGAILSFLGMWLVQQLGPK RVSIIGVSVTGGILHNVGQLVIASWIAGTWSVMLYLPVLSFIGILSGIAVGIAANYLL KNVQTLRMFADAKQSQAAQK" misc_feature 2713398..2713883 /locus_tag="lmo2640" /note="Uncharacterized membrane protein [Function unknown]; Region: COG4769" /db_xref="CDD:443801" regulatory 2713951..2713956 /regulatory_class="ribosome_binding_site" gene 2713962..2714942 /locus_tag="lmo2641" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986303" CDS 2713962..2714942 /locus_tag="lmo2641" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="heptaprenyl diphosphate synthase subunit II" /protein_id="NP_466164.1" /db_xref="GeneID:986303" /translation="MQLHAMWDEYPALSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIH AGGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPT IHSKYGRNYAVYTGDYLFCICFKILSAHASSVENIEFNSKNIEKILMGELDQMRTSYK MNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDV LDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMKGHLAEFEPLLSQKLDMTDEASEQVLA LISKYKGVEQAFKLAKKYTNKALREIKKLPAGAYREDMYRLTKNILDRDI" misc_feature 2713962..2714936 /locus_tag="lmo2641" /note="Geranylgeranyl pyrophosphate synthase [Coenzyme transport and metabolism]; Region: IspA; COG0142" /db_xref="CDD:439912" regulatory 2715017..2715021 /regulatory_class="ribosome_binding_site" gene 2715032..2716363 /locus_tag="lmo2642" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984410" CDS 2715032..2716363 /locus_tag="lmo2642" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2642" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466165.1" /db_xref="GeneID:984410" /translation="MIRFFKIVTPILLSISLVACSSASGKTEKITAPIEKDRNLSMVV TTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDL TNNGEKTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTD FSKIYGDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTA GTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMDF SLSGHIHTQNIRSAKSTDGKEITDIVTNALSVFPHKYGNITYSAKNKNFTYQSQKLDM EAWAKAQGSTDENLLNFDQFDYETFYNSGYDKAMMDLMTDESYDKYNQADKEKMADTM GLNNMYFFAGTAPPKSDGMALWDSAPNSFLKDYVLSSSNPPKKSNDYYVSP" misc_feature 2715167..>2715880 /locus_tag="lmo2642" /note="3',5'-cyclic AMP phosphodiesterase CpdA [Signal transduction mechanisms]; Region: CpdA; COG1409" /db_xref="CDD:441019" misc_feature 2716028..2716315 /locus_tag="lmo2642" /note="C-terminal domain of cyclic nucleotide phosphodiesterase; Region: CNP_C_terminal; pfam17839" /db_xref="CDD:465527" regulatory complement(2716364..2716398) /regulatory_class="terminator" regulatory 2716375..2716409 /regulatory_class="terminator" gene complement(2716408..2717394) /locus_tag="lmo2643" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985362" CDS complement(2716408..2717394) /locus_tag="lmo2643" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2643" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466166.1" /db_xref="GeneID:985362" /translation="MDSAYVFDSEQATKLLMKNYELVKTSGVSFIDKRIRFLIARLFA GNNEVVNPERFNEINKEIKRQLGMFTALNGNVRASLVGLLMANNNASRESVQQVIANY NTLIQAGFQRTEYTYFAAYLLLESENPTKTAQKAKTIHQLFKKDHPFLTKSEDVTTAV FLANLPEENTTELAEVTEYYFQEFAAKGFRKNDSLQFLATTGTLLYGEKDSKFIRRVD NIVEELRQKGIKVKPIHYSSIGILAFVMDGRKIDSGLVNLIDELQQQPGLRFGREFVT ALAISLYTEKQSGQMSKEQLEGLMVNVHILIAMEQAAAVSAAAAASAAAASS" misc_feature complement(2716462..2717340) /locus_tag="lmo2643" /note="Protein of unknown function (DUF4003); Region: DUF4003; pfam13170" /db_xref="CDD:433008" regulatory complement(2717402..2717407) /regulatory_class="ribosome_binding_site" gene complement(2717422..2718234) /locus_tag="lmo2644" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986304" CDS complement(2717422..2718234) /locus_tag="lmo2644" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2644" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466167.1" /db_xref="GeneID:986304" /translation="MLTTRKALYYLDKGKTKEAIRLLETCWKQEVTTKNKRDIFTATV LLSDVLYQSGEHFPEIYQQLMSILEEMQDLEAVEFEREKAKQIFAELDEYFSEVGTFF QGDSLAELWLEFDYENDYKDVYPTPQRVAAIEAELGYKLPKSYIYLMRHTQNGGIVST GSVPTTEPSSWSENCVAITGIMGIGNQGISALNGMHNTNFWIEEWGYPDVGLAIADCP SAGHDMVFLDYRNCGKTGEPAVVHIDQEADYKIMKLADNFEAFILSLYREEY" misc_feature complement(2717449..2717853) /locus_tag="lmo2644" /note="SMI1-KNR4 cell-wall; Region: SUKH_6; pfam14568" /db_xref="CDD:434043" regulatory complement(2718241..2718246) /regulatory_class="ribosome_binding_site" regulatory complement(2718268..2718303) /regulatory_class="terminator" gene complement(2718312..2719055) /locus_tag="lmo2644a" /db_xref="GeneID:16695806" CDS complement(2718312..2719055) /locus_tag="lmo2644a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475644.1" /db_xref="GeneID:16695806" /translation="MINNYVDITVRLLENILDNEADYVKEAGAKVAKSIENDGVIHLF GCGHSHILTEEVFYRAGGLAAIHPILHEPLMLHEGAAASSVLERKNDYAKTFMVEEDI RPGDIMIVLSTSGRNPVPIDVAEIAREKGAFVIVITSLQYSASQKSRHKSGKRLSDTG DIVIDNGAVKGDAVLKSANFDIAFAPTSTVTGAVILQSIFAEAIEKMVNDNFTPPVFI SGNVENADAHNQALVDKYKERIPLLGMNL" misc_feature complement(2718324..2719055) /locus_tag="lmo2644a" /note="sugar isomerase domain-containing protein; Region: PRK02947" /db_xref="CDD:179510" misc_feature complement(order(2718720..2718722,2718909..2718911)) /locus_tag="lmo2644a" /note="putative active site [active]" /db_xref="CDD:240144" gene complement(2719056..2719775) /locus_tag="lmo2646" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985483" CDS complement(2719056..2719775) /locus_tag="lmo2646" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2646" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466168.1" /db_xref="GeneID:985483" /translation="MNKKKFENLPKWNNFALFNFLAKDKENSLEVMVAARGFAVPGIV ATNYETAEEAANVVKELQTTAEVISVGLGGGGDWQNWRDVLHIARLAPNSHINQPIET AGLTNGLLPETYTNALVRPTGKVGIVKLSSGDEITAEEAVDYCLSANIPSIKFMSIEG TKYLDELVYLTKIAADKGIYGIEPAGGIGADNILEITTAIKSTGIPFYMPHIFGKTID KATGRTKPEEIEKIFAALEGN" misc_feature complement(2719119..2719742) /locus_tag="lmo2646" /note="KDGP aldolase; Region: KDGP_aldolase; pfam07071" /db_xref="CDD:399806" regulatory complement(2719064..2719069) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2646" gene complement(2719735..2720484) /locus_tag="lmo2647" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987172" CDS complement(2719735..2720484) /locus_tag="lmo2647" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="creatinine amidohydrolase" /protein_id="NP_466169.1" /db_xref="GeneID:987172" /translation="MLYADENSFDIGAKITKTKPVILPIGAVEAHGPHLPLGTDNILA SEYSAKIAAKTDGFVLPVLPYGQVWSLQDFPGSLTLSNETVTKVVVEIGESLYKQGFR LFVPVSGHLGNMAALKDAARELYAKFPDMVILHIFYPNIQKLAMDVREGKANHHTYIH ACEIETSLMLYLSPENTDMSRAIDDPPILPIDADFTPTPWQTFTKTAVLGEATLATAE KGEYLIEKTLKTCVELIKLEQEKIRKSTEME" misc_feature complement(2719777..2720481) /locus_tag="lmo2647" /note="Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis) [Coenzyme transport and metabolism]; Region: ArfB; COG1402" /db_xref="CDD:441012" regulatory complement(2719785..2719790) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2647" regulatory complement(2720493..2720498) /regulatory_class="ribosome_binding_site" gene complement(2720497..2721489) /locus_tag="lmo2648" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987171" CDS complement(2720497..2721489) /locus_tag="lmo2648" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphotriesterase" /protein_id="NP_466170.1" /db_xref="GeneID:987171" /translation="MSFIRTFYGDIAPDQLGFTYSHEHIVCVPAYWQERNADDLLLDD KEKSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFNKSFLWD GKIKPELKPIIGDFETYYEWIENTSTEKLTEFVVNEVENGLEGTPYKAGQVKFGTGYN MITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDR NLDPYYHKQVAKTGAFMSFDGIAKIKYAPESARIAAILYLVSEGFEDQILVSGDTARK TYYKHYGHGPGLEYIAKKWVPRFIDEANEKGFDGEKLVKKFFVDNPARCFTFKK" misc_feature complement(2720506..2721489) /locus_tag="lmo2648" /note="Predicted metal-dependent hydrolase, phosphotriesterase family [General function prediction only]; Region: Php; COG1735" /db_xref="CDD:441341" regulatory complement(2721499..2721504) /regulatory_class="ribosome_binding_site" gene complement(2721559..2722857) /gene="ulaA" /locus_tag="lmo2649" /gene_synonym="sgaT" /db_xref="GeneID:987170" CDS complement(2721559..2722857) /gene="ulaA" /locus_tag="lmo2649" /gene_synonym="sgaT" /experiment="EXISTENCE:[PMID:19448609]" /note="membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr" /codon_start=1 /transl_table=11 /product="PTS system ascorbate transporter subunit IIC" /protein_id="NP_466171.1" /db_xref="GeneID:987170" /translation="MEIITWIANNFFGTPAILLGFIVLLGLLLQKKNLSQVISGTFKA IIGFLIINAGAAVITGSLGIFEPMWKEVFGLETPPLAGFLGQEAFNAKFGSAVTLAMT LGFLVNVLLARFTPFKYIYLTGHMMFWTTTIFAGITVQAVGGDIPFWGLVLFLAVIMG LYWTLQPAITQPFLRKITGNDNVALGHTSSSVAILSALLGKVFGNKKNDAEHINLPKK LEFLRDSNVITALTMGILFVVGAVILMVKKTPGAEELIAEAGNQSFIVYSIVQSFTFA AGIAIVLVGVRMFIGEIVPAFNGIATKLVPGAKPALDAPIVYPYAPNSVIIGFVGAFI GAIIWLVVLGNTVGYVFVPTMIVLFFHGAVAGVFGNSTGGVRGALIGGFLTATVVAWG QYIMVTFFINTTVPDTAMWAADSDMFILGPIVSMLAKLFF" misc_feature complement(2721565..2722857) /gene="ulaA" /locus_tag="lmo2649" /gene_synonym="sgaT" /note="Ascorbate-specific PTS system IIC component UlaA [Carbohydrate transport and metabolism]; Region: UlaA; COG3037" /db_xref="CDD:442271" regulatory complement(2722865..2722870) /regulatory_class="ribosome_binding_site" gene complement(2722884..2723156) /locus_tag="lmo2650" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987169" CDS complement(2722884..2723156) /locus_tag="lmo2650" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MFS transporter" /protein_id="NP_466172.1" /db_xref="GeneID:987169" /translation="MKILAVCGLGQGTSLILRMNVETVLRDMGVDADVEHIDVSAARS MNVDIIVTSQELAETLGTDTSAKVVIVNNYFDNAEIKNALSAAINS" misc_feature complement(2722893..2723153) /locus_tag="lmo2650" /note="subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel...; Region: PTS_IIB_ascorbate; cd05563" /db_xref="CDD:99905" misc_feature complement(order(2723115..2723123,2723127..2723138)) /locus_tag="lmo2650" /note="P-loop; other site" /db_xref="CDD:99905" misc_feature complement(order(2723115..2723120,2723127..2723132, 2723136..2723138)) /locus_tag="lmo2650" /note="active site" /db_xref="CDD:99905" misc_feature complement(2723136..2723138) /locus_tag="lmo2650" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99905" gene complement(2723159..2723593) /locus_tag="lmo2651" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984393" CDS complement(2723159..2723593) /locus_tag="lmo2651" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannitol transporter subunit IIA" /protein_id="NP_466173.1" /db_xref="GeneID:984393" /translation="MSFLDKELVNLHGSAKNADEAIVQAGELLVNAGYVSEQYVEKMV ESYHENGAYFVIAPQIAIPHARPTDGVENSAVSLVVLKDGVNFGHAANDPVRLVFGLA ATSSEAHLKVIQKIVSLLSNNDNIEKMIHSEDYQAIGELVEG" misc_feature complement(2723168..2723584) /locus_tag="lmo2651" /note="PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_fru; cd00211" /db_xref="CDD:238129" misc_feature complement(order(2723402..2723404,2723456..2723458)) /locus_tag="lmo2651" /note="active site" /db_xref="CDD:238129" misc_feature complement(2723402..2723404) /locus_tag="lmo2651" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:238129" regulatory complement(2723164..2723169) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2651" regulatory complement(2723601..2723606) /regulatory_class="ribosome_binding_site" regulatory complement(2723737..2723777) /regulatory_class="terminator" gene complement(2723786..2725852) /locus_tag="lmo2652" /db_xref="GeneID:985080" CDS complement(2723786..2725852) /locus_tag="lmo2652" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional antiterminator" /protein_id="NP_466174.1" /db_xref="GeneID:985080" /translation="MVQFDARNMTLLESLVVANVYLAPENLQEELGISKRTLQYDVEK INKELDNIGLDGIQSVRGQGYYLLEEEKTTIKEILENREASHKVFSASERRIRILFFL LVTDARVIIDTINECNEVSRNTSLQDIKQLKLALKQFNLELAYDRKNGNMVLGDERSI RQFFIHYCMNNEEIATADQLLDLMKINPMIKNQELFPKLDMIFEILAVTEKKIGIRYT DEVIERIGIMIFFFKERMKRNCYLNEKEEHEVESFGIAQEIYQQLQQSENFKINHAEI TYLGKLLLGASRLNDDAAAEGKLDLIVEKIIAEFERLACVNFEDHRNLKKDLLLHLQP AYYRLKFQIEWINPLRTDIKQSYSDVYEITKKSLEPLEDLLGEAIPEDEIAYVTILFG GYLSRKNNTLVERKKLLIVCSKGVGTSRMIERQLSQLLGERVEILEPISIREFEKGLY APDFIVSTLPIMEQKAPVFIVSPILTEAQKQQLMKVIAPHILQKDSDARMLSSVLDVV DQYAKVEDREKLAAKLKSVLFQVQSDSQLEKSPSLDELLPQERIIFKESVTDWQEAIR VASKPLQQEGYISKNYQHAMIENIEKLGPYIVIAPGIALPHASVDDGAYRVGMSLLRL DQPVSFSSKAKDQVKLIIVLASIDSYTHINALSQLTNLIMKHHLLEQIEQATSAAEIA AMLTIK" misc_feature complement(2723834..2725822) /locus_tag="lmo2652" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" regulatory complement(2725861..2725866) /regulatory_class="ribosome_binding_site" regulatory complement(2725953..2725989) /regulatory_class="terminator" gene complement(2726008..2727195) /gene="tuf" /locus_tag="lmo2653" /db_xref="GeneID:987166" CDS complement(2726008..2727195) /gene="tuf" /locus_tag="lmo2653" /EC_number="3.6.5.3" /experiment="EXISTENCE:[PMID:19448609]" /note="EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu" /codon_start=1 /transl_table=11 /product="elongation factor Tu" /protein_id="NP_466175.1" /db_xref="GeneID:987166" /translation="MAKEKFDRSKPHVNIGTIGHVDHGKTTLTAAITTVLAKKGYADA QAYDQIDGAPEERERGITISTAHVEYQTDSRHYAHVDCPGHADYVKNMITGAAQMDGA ILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKCDMVDDEELLELVEMEIRDLLTE YEFPGDDIPVIKGSALKALQGEADWEAKIDELMEAVDSYIPTPERDTDKPFMMPVEDV FSITGRGTVATGRVERGQVKVGDEVEVIGIEEESKKVVVTGVEMFRKLLDYAEAGDNI GALLRGVAREDIQRGQVLAKPGSITPHTNFKAETYVLTKEEGGRHTPFFNNYRPQFYF RTTDVTGIVTLPEGTEMVMPGDNIELAVELIAPIAIEDGTKFSIREGGRTVGAGVVSN ISK" misc_feature complement(2726011..2727195) /gene="tuf" /locus_tag="lmo2653" /note="elongation factor Tu; Reviewed; Region: PRK00049" /db_xref="CDD:234596" regulatory complement(2727206..2727211) /regulatory_class="ribosome_binding_site" gene complement(2727304..2729391) /gene="fus" /locus_tag="lmo2654" /gene_synonym="fusA" /db_xref="GeneID:986619" CDS complement(2727304..2729391) /gene="fus" /locus_tag="lmo2654" /gene_synonym="fusA" /experiment="EXISTENCE:[PMID:19448609]" /note="EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene" /codon_start=1 /transl_table=11 /product="elongation factor G" /protein_id="NP_466176.1" /db_xref="GeneID:986619" /translation="MAREFSLEKTRNIGIMAHIDAGKTTTTERILFYTGRIHKIGETH EGASQMDWMEQEQERGITITSAATTAQWKGYRVNIIDTPGHVDFTVEVERSLRVLDGA VAVLDAQSGVEPQTETVWRQATTYGVPRVVFVNKMDKIGADFLYSVGTLHERLAANAH PIQLPIGAEDTFEGIIDLIEMNALYYEDDLGNDPHIKEIPADLKDLADEYRGKLVEAV AELDEELMMKYLEGEEITKEELKAGIRKGTLNVEFYPVVCGTAFKNKGVQPMLDAVLD YLPAPTDVPAINGVLPDGEEAARHADDSEPFSSLAFKVMTDPYVGRLTFFRVYSGTLN SGSYVQNSTKGKRERVGRILQMHANHREEISIVYAGDIAAAVGLKDTTTGDTLCDEKE QIILESMEFPEPVIQVAIEPKSKADQDKMGQALAKLAEEDPTFRAETDQETGQTLISG MGELHLDILVDRMRREFRVEANVGDPQVSYRETFRKSAQVEGKFVRQSGGRGQYGHVW IEFGPNEEGKGFEFENAIVGGVVPREYIPAVQAGLEGALDNGVLAGYPLIDIKAKLYD GSYHDVDSNEMAFKVAASMALRNAAKKCDPVILEPMMAVEVVIPEEYLGDIMGNITSR RGRVDGMEARGNAQVVRAFVPLANMFGYATHLRSGTQGRGVYTMQFDHYEEVPKSIAE EIIKANGGNNKED" misc_feature complement(2727313..2729391) /gene="fus" /locus_tag="lmo2654" /gene_synonym="fusA" /note="Translation elongation factor EF-G, a GTPase [Translation, ribosomal structure and biogenesis]; Region: FusA; COG0480" /db_xref="CDD:440248" regulatory complement(2729400..2729405) /regulatory_class="ribosome_binding_site" gene complement(2729457..2729927) /gene="rpsG" /locus_tag="lmo2655" /db_xref="GeneID:987165" CDS complement(2729457..2729927) /gene="rpsG" /locus_tag="lmo2655" /experiment="EXISTENCE:[PMID:19448609]" /note="binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S7" /protein_id="NP_466177.1" /db_xref="GeneID:987165" /translation="MPRKGPVAKRDVLPDPIYNSKLVTRLINKMMVDGKRGKSQAILY SAFDIIAQETGKDPMEVFEQAMKNIMPLLEVKARRVGGANYQVPIEVRADRRSTLGLR WLVNYARLRGEKTMEVRVAREIMDAANNTGASVKKREDTHKMADANRAFAHYRW" misc_feature complement(2729460..2729927) /gene="rpsG" /locus_tag="lmo2655" /note="30S ribosomal protein S7; Validated; Region: PRK05302" /db_xref="CDD:235398" misc_feature complement(order(2729571..2729573,2729580..2729585, 2729601..2729603,2729622..2729624,2729634..2729636, 2729643..2729648,2729673..2729675,2729685..2729687, 2729700..2729702,2729802..2729807,2729814..2729828, 2729838..2729846)) /gene="rpsG" /locus_tag="lmo2655" /note="rRNA binding site [nucleotide binding]; other site" /db_xref="CDD:271248" misc_feature complement(order(2729796..2729798,2729805..2729810, 2729817..2729819)) /gene="rpsG" /locus_tag="lmo2655" /note="S9 interface [polypeptide binding]; other site" /db_xref="CDD:271248" misc_feature complement(2729481..2729483) /gene="rpsG" /locus_tag="lmo2655" /note="S11 interface [polypeptide binding]; other site" /db_xref="CDD:271248" regulatory complement(2729935..2729940) /regulatory_class="ribosome_binding_site" gene complement(2729958..2730371) /gene="rpsL" /locus_tag="lmo2656" /db_xref="GeneID:987164" CDS complement(2729958..2730371) /gene="rpsL" /locus_tag="lmo2656" /experiment="EXISTENCE:[PMID:19448609]" /note="interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S12" /protein_id="NP_466178.1" /db_xref="GeneID:987164" /translation="MPTINQLVRKPRQSKIKKSTSPALNKGLNSFKRELTDVNSPQKR GVCTRVGTMTPKKPNSALRKYARVRLSNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKD LPGVRYHIVRGALDTAGVENRGQSRSKYGTKKPKK" misc_feature complement(2729961..2730371) /gene="rpsL" /locus_tag="lmo2656" /note="Ribosomal protein S12 [Translation, ribosomal structure and biogenesis]; Region: RpsL; COG0048" /db_xref="CDD:439818" regulatory complement(2730382..2730387) /regulatory_class="ribosome_binding_site" gene complement(2730564..2731961) /locus_tag="lmo2657" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985613" CDS complement(2730564..2731961) /locus_tag="lmo2657" /experiment="EXISTENCE:[PMID:19448609]" /note="dGTPase type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate" /codon_start=1 /transl_table=11 /product="deoxyguanosinetriphosphate triphosphohydrolase" /protein_id="NP_466179.1" /db_xref="GeneID:985613" /translation="MKWDKLLNDKRRRESGVTRSKNTDVRSAFENDFQRIVMSASFRR LQDKTQVFPLEKSDFVRTRLTHSMEVSTIAKSMGNMVTHTIQEENLDQDFTKDHAEKI PEILACAGLLHDMGNPPFGHFGEESIREWFRDNLATITYKNKSLAEILTPQMKEDFYY FEGNAQVLRVVSKLHYLFDQYGLNLTFATLNAVIKYPVSSLKVNKKQIKSKKLGYFYA DESLFNEITTATEALDNRHPLTYLLEVADDIAYLNADLEDGVKKGIVNITQILKGFEE VEEHNKVTAACYNELKKKSERYEGQEESFIVQQWLASNVRGQLINRSLEVFYENYDAI MAGTFNDSLIDASSAEQLVQILQSLSFTYIYQDKGIVESEIAGNEIISKLLETFIPAV IYYDSETPERQTAKDKRLLTLISDNYLGCYRKNAEGESETMKLYLRLLLVTDFICGMT DSYAKDLYQRLNGLS" misc_feature complement(2730567..2731961) /locus_tag="lmo2657" /note="deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional; Region: PRK01096" /db_xref="CDD:234897" regulatory complement(2731970..2731975) /regulatory_class="ribosome_binding_site" gene complement(2731976..2732455) /locus_tag="lmo2658" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984905" CDS complement(2731976..2732455) /locus_tag="lmo2658" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acyltransferase" /protein_id="NP_466180.1" /db_xref="GeneID:984905" /translation="MTQLTFRNGTEQDTKLILRFITELATHEGIEKDVVATESGLHKA LFQEKSAEVIIAEYEDAPVGFALFFHNFSTLLGKKGLYLEDLYIIPEMRGKGFGTQFF SYLSKLALARDCGRFEWWCLNENKSGMDFYEKIGAEKMSEWTVHRLTKAEMEKLSNL" misc_feature complement(2731994..2732446) /locus_tag="lmo2658" /note="N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2) [Transcription, General function prediction only]; Region: PhnO; COG0454" /db_xref="CDD:440222" regulatory complement(2732462..2732467) /regulatory_class="ribosome_binding_site" regulatory complement(2732539..2732575) /regulatory_class="terminator" gene complement(2732589..2733233) /locus_tag="lmo2659" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985991" CDS complement(2732589..2733233) /locus_tag="lmo2659" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ribulose-phosphate 3-epimerase" /protein_id="NP_466181.1" /db_xref="GeneID:985991" /translation="MTFVAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNL TFGIDMVEQIGKTATIPLDVHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQ IKAAGCKAGVVLNPGTPASVLDAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDN WRRKNHGSYVIEVDGGVNAETAEKCKQAGVDILVAGSYFFGATDKAACIQGLKK" misc_feature complement(2732592..2733224) /locus_tag="lmo2659" /note="Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; Region: Rpe; COG0036" /db_xref="CDD:439806" gene complement(2733230..2735245) /locus_tag="lmo2660" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986863" CDS complement(2733230..2735245) /locus_tag="lmo2660" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transketolase" /protein_id="NP_466182.1" /db_xref="GeneID:986863" /translation="MKKTLDRQAVDTIRSLSIDMIEKANSGHPGMPMGAAPMAYMLFA KHLVFNPANPEWFNRDRFVLSAGHGSALLYSMLHLFGYDVKMEDLKQFRQLDSLTPGH PEFGWTAGVDATSGPLGQGIGMAAGMALAESHLAAEYNQPNYPIVDHYTYAICGDGDL MEGVASETASLAGHLGLGKLIVLYDSNDICLDGDLSATFSENAADRFRAYGWQVLRVE DGNNLAAIQEKIVQAKLETSKPTLIEVKTVIGYGAPTKAGSSASHGAPLGEKEANGAK EHYEWAEEPFTVPAEVRDYLRNYKARGEKLEGAWNTMLANYKKEFPELARQLDRVLAG EVAADWNANLPTFEAGTNVATRSASGKMINAIAAELPELFGGSADLGCSNKTFIDASP AYSIQDPAGKNIWFGVREFAMGAMLNGMALHSGLRVFGSTFFVFSDYVRPAMRMAALM QLPVTYVFTHDSIAVGEDGPTHEPIEQLASLRAMPGLTVIRPADAKETRAAWEIAATN TNGPIALVLSRQDLPVLENDQEEVDAGIEKGAYIVAPANSSKPDAIIIATGSEVSLAI EAKAELAKKDIDVSVVSLSSWERFEKTTDAYKESILPKEVTARFAIEAGATFGWKEFI GSEGDMLGIDHFGASAPAKDLFNAYGFTPENVADRVEAVIAKAGVRV" misc_feature complement(2733254..2735239) /locus_tag="lmo2660" /note="Transketolase [Carbohydrate transport and metabolism]; Region: TktA; COG0021" /db_xref="CDD:439792" regulatory complement(2733241..2733249) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2660" regulatory complement(2735254..2735259) /regulatory_class="ribosome_binding_site" gene complement(2735279..2735953) /locus_tag="lmo2661" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984667" CDS complement(2735279..2735953) /locus_tag="lmo2661" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ribulose-5-phosphate 3-epimerase" /protein_id="NP_466183.1" /db_xref="GeneID:984667" /translation="MRKIAASIMCADQLHLGDELQRLESAGVELLHCDVMDGVYVNNL ALGPEYLEIVRNNTEIPLDIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEIIRK IRSYNVKPSIAINPETPIEAIYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKA KLAGKIHAPLIEVDGNINKETVGLMRDCLPDIYVLGTSALFHDRDKTSYAERLVHIWS NVEKHV" misc_feature complement(2735315..2735947) /locus_tag="lmo2661" /note="Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose...; Region: RPE; cd00429" /db_xref="CDD:238244" misc_feature complement(order(2735360..2735362,2735366..2735368, 2735426..2735428,2735432..2735434,2735522..2735527, 2735531..2735536,2735753..2735755,2735852..2735854, 2735927..2735929,2735933..2735935)) /locus_tag="lmo2661" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238244" misc_feature complement(order(2735492..2735494,2735504..2735506, 2735510..2735512,2735537..2735539,2735579..2735581, 2735591..2735593,2735597..2735599,2735606..2735608, 2735660..2735665,2735669..2735671,2735732..2735734, 2735744..2735746,2735813..2735824,2735828..2735830, 2735834..2735839,2735843..2735845,2735903..2735905, 2735912..2735914)) /locus_tag="lmo2661" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:238244" misc_feature complement(order(2735432..2735434,2735759..2735761, 2735852..2735854,2735858..2735860)) /locus_tag="lmo2661" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238244" regulatory complement(2735960..2735965) /regulatory_class="ribosome_binding_site" gene complement(2735962..2736402) /locus_tag="lmo2662" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984684" CDS complement(2735962..2736402) /locus_tag="lmo2662" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ribose 5-phosphate epimerase" /protein_id="NP_466184.1" /db_xref="GeneID:984684" /translation="MKLTIGCDHGGRRLKDAIVKHLREKDIEVVDIGTYTDESVDFPS YAEEVANQVVSGQSELGILCCGTGIGMSIAANKVDGIRAAVVSDTFSARATREHNNSN ILCLGERVIGEGLALLLVDTWLEASFAGDRHKRRLDKITELERK" misc_feature complement(2735965..2736402) /locus_tag="lmo2662" /note="Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]; Region: RpiB; COG0698" /db_xref="CDD:440462" regulatory complement(2736412..2736417) /regulatory_class="ribosome_binding_site" gene complement(2736597..2737628) /locus_tag="lmo2663" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984376" CDS complement(2736597..2737628) /locus_tag="lmo2663" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="polyol dehydrogenase" /protein_id="NP_466185.1" /db_xref="GeneID:984376" /translation="MKAVVKTNPGYDQMELKDVEEPQVYGDKVKIKVAFTGICGSDIH TFKGEYKNPTTPVTLGHEFSGVVVEVGPDVTSIKVGDRVTSETTFETCGECIYCKEHD YNLCSNRRGIGTQANGSFAEFVLSREESCHVLDERISLEAAALTEPLACCVHSALEKT TIRPDDTVLVFGPGPIGLLLAQVVKAQGATVIMAGITKDSDRLRLAKELGMDRIVDTL KEDLAEVVLGMTGGYGAERVFDCSGAVPAVNQGLPLTKKKGDFVQVGLFAEKKNAIDE ESIIQREIAYIGSRSQKPSSWILALDLLANGKIDTDKMITKVYGLDDWREAFEAVMAG NEIKVLVKS" misc_feature complement(2736708..2737628) /locus_tag="lmo2663" /note="Alcohol dehydrogenases of the MDR family; Region: Zn_ADH4; cd08258" /db_xref="CDD:176219" misc_feature complement(order(2736756..2736764,2736834..2736839, 2736897..2736899,2736903..2736908,2736954..2736956, 2737023..2737025,2737041..2737046,2737098..2737115, 2737176..2737178,2737188..2737190,2737497..2737499, 2737506..2737514)) /locus_tag="lmo2663" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176219" misc_feature complement(order(2737188..2737190,2737443..2737448, 2737512..2737514)) /locus_tag="lmo2663" /note="catalytic Zn binding site [ion binding]; other site" /db_xref="CDD:176219" misc_feature complement(order(2737311..2737313,2737335..2737337, 2737344..2737346,2737353..2737355)) /locus_tag="lmo2663" /note="structural Zn binding site [ion binding]; other site" /db_xref="CDD:176219" gene complement(2737630..2738682) /locus_tag="lmo2664" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987161" CDS complement(2737630..2738682) /locus_tag="lmo2664" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sorbitol dehydrogenase" /protein_id="NP_466186.1" /db_xref="GeneID:987161" /translation="MRAAVLYENNVIKAEQIDEATCGKDQVRVEVKAVGICGSDIHKM QTRWKYPLPAVMGHEFAGVITEIGSEVTNVAMGDRVAGIPLEPCMECNYCKAGDFALC DNYRMVGSHFHGGFAENVVMKADNVISIGDLDFEEGAMIEPLAVSMHGVLGIQPRLGD TVIVFGIGTIGILVVQCLLLAGVKDIIAVDISDKKLADAREFGCKYTINPKNEDLKER VFAYTNGLGADIALECAGSKITQEQCLLVTKKKGKVGFLGIAYADVLLHEEAFENIFR RELTLKGFWNSYSAPFPGEEWRTSIEFVKQGRIKLKPLISHRYKLEETKEAFDMILSR EHDYNKVMILPQKGDD" misc_feature complement(2737654..2738682) /locus_tag="lmo2664" /note="NAD(P)-dependent sugar dehydrogenases; Region: sugar_DH; cd08236" /db_xref="CDD:176198" misc_feature complement(order(2737825..2737833,2737909..2737914, 2737972..2737974,2737978..2737983,2738053..2738055, 2738098..2738100,2738110..2738115,2738170..2738187, 2738245..2738247,2738257..2738259,2738557..2738559, 2738566..2738574)) /locus_tag="lmo2664" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176198" misc_feature complement(order(2738257..2738259,2738509..2738511, 2738566..2738568,2738572..2738574)) /locus_tag="lmo2664" /note="catalytic Zn binding site [ion binding]; other site" /db_xref="CDD:176198" regulatory complement(2737637..2737642) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2664" regulatory complement(2738690..2738695) /regulatory_class="ribosome_binding_site" gene complement(2738719..2739990) /locus_tag="lmo2665" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987160" CDS complement(2738719..2739990) /locus_tag="lmo2665" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS galacticol transporter subunit IIC" /protein_id="NP_466187.1" /db_xref="GeneID:987160" /translation="MDTLLSGVQYVLNLGPTVILPIMIFFIALIFRVPAKKALRSAIT IGIGFVGINLVISLLSSNLGPAAQQMVERFGLNLTIIDAGWPAAAAASWASPVAAILI PICLVVNLALIFFKVTKTLDIDIWNYWHFIAAGATGYIVTGGNWWFAILCAIIYEVAV LWMADRTQPMVEEFYGLKGISLPTGSTAAFGFIGIPVGWLIAKIPGIKNIHVDPETIQ KRFGIFGEPMMMGLILGIAIGILAGYDVGAVAQLGMSMGAVMFLMPRMVKILMEGLIP ISESAREFMKSRFKGRELYIGLDAALSIGHPANISTGLILVPITLFLAVIIPGNKVLP FGDLATIPFYVSFVVASRKGNILHSVLAGTVVIALALLMATDFGLVHTEMMKGVYEFP KGATQVSTLDMGGNFFNWVILKFSQAWAAIF" misc_feature complement(2738725..2739990) /locus_tag="lmo2665" /note="Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism]; Region: SgcC; COG3775" /db_xref="CDD:442989" regulatory complement(2740000..2740005) /regulatory_class="ribosome_binding_site" gene complement(2740052..2740333) /locus_tag="lmo2666" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987159" CDS complement(2740052..2740333) /locus_tag="lmo2666" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS galacticol transporter subunit IIB" /protein_id="NP_466188.1" /db_xref="GeneID:987159" /translation="MGQFKILVACGAGIATSTVVTDRVERLVKENNVDAEVKQIKISE AASMQDGADLIVSTTILPTTYKIPAIIATSYITGMGMEELDEEILAHLK" misc_feature complement(2740058..2740321) /locus_tag="lmo2666" /note="subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC...; Region: PTS_IIB_galactitol; cd05566" /db_xref="CDD:99908" misc_feature complement(order(2740283..2740291,2740295..2740306)) /locus_tag="lmo2666" /note="P-loop; other site" /db_xref="CDD:99908" misc_feature complement(order(2740283..2740288,2740295..2740300, 2740304..2740306)) /locus_tag="lmo2666" /note="active site" /db_xref="CDD:99908" misc_feature complement(2740304..2740306) /locus_tag="lmo2666" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99908" regulatory complement(2740342..2740347) /regulatory_class="ribosome_binding_site" gene complement(2740390..2740854) /locus_tag="lmo2667" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987158" CDS complement(2740390..2740854) /locus_tag="lmo2667" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS galacticol transporter subunit IIA" /protein_id="NP_466189.1" /db_xref="GeneID:987158" /translation="MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEGYVTDDFLT RLTDREQTFPTGLKLDGYGVALPHTDPECVTEQFIAVITVKDGIPFKLMEDAGQTVEA NLIFVLGLNEPHSQLAVLQQLMGTIQDKDNVAALLRAKDEDEVKQILETIAV" misc_feature complement(2740405..2740839) /locus_tag="lmo2667" /note="Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; Region: PTS_EIIA_2; pfam00359" /db_xref="CDD:459780" regulatory complement(2740863..2740868) /regulatory_class="ribosome_binding_site" gene complement(2740888..2742957) /locus_tag="lmo2668" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987157" CDS complement(2740888..2742957) /locus_tag="lmo2668" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional antiterminator BglG" /protein_id="NP_466190.1" /db_xref="GeneID:987157" /translation="MYLDERSNSLLKELLRHPDTSSTNLQAKFGLTRRQVDYSFQKIN NWLEEQTYPKIHRAANGRFIVEPDLFQIIGEEDGEKTDWYIPSEKERASLIILMLTTG SEELSLNHFISELEVSKNTVLRDLKLVQKTLDKFNLEVKYSRMRGYLIDGDEWNQRTA LIYAAEHIIESFGGEEYLQDFMQVDEARIKELREKLEQVEHHLNLHFIDNKMQILPYI LEAVFRRMKKGQTITTSFLIDYNELSDTREYGAAEIFIEEEPNMPEAERMYITLQLLT SNVLPKQYLKSEETHKLRLALEQVLSEFEKKACIQLVDKESLLEKLFAHIKPAYYRIK YHLTTDYSILDKIDQEFQAVHYIVKESLAPLERFIGSKVPENESIFITLFIGGHLIES TEKLQTRLKAVVVCPNGLSISRLMEKTLRSLFPEIFFYQAMSIREFEQTKLGYDIVFS AVPLSTDKKFFLINQLMDGKERLELRRRVMRSVYLVDEVNISVDQLMKTISKFADIKD AARLEKVLADYLMPVPEENTSKHEGKSSLADLLEVTRITRKKSVKDWHEAIYHAALPL LSAGVVEPAYVEEMKRQYPAPIMNIILRNTIAIPHAETEKGVNSLGMSLLYLEEGLPL EGGKELHFIVVIAAIDKNAHFTALLQLMELSENKKELKKLADAANTEEMHQIIKNFTD LETKKTM" misc_feature complement(2740960..2742930) /locus_tag="lmo2668" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" regulatory complement(2742965..2742970) /regulatory_class="ribosome_binding_site" regulatory complement(2743271..2743312) /regulatory_class="terminator" gene complement(2743326..2744138) /locus_tag="lmo2669" /db_xref="GeneID:987156" CDS complement(2743326..2744138) /locus_tag="lmo2669" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2669" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466191.1" /db_xref="GeneID:987156" /translation="MDINMFILYFFIYSVLGWAWEEVFCSISEKKLVYRGFLYGPYCP IYGFGVTAVLMMILPFQNNLWALFIFSMIICTVIEYVTATILEALFHTTWWDYHNWPL NVKGRICLPISIFWGFACIIVVRFLHPLVTEFADWILSWGGWIIPALIVVLMLIDTIK SVTSMLSFQKALAEFNEKLNAQANELKASVKERAKEFEEGLLKKQENVDMKIAEIEAK RKQDKELAASMRKLKFNERRMLKSFPKMKVKRAAPFKNLNKSLLRVDKLKRK" misc_feature complement(2743569..2744120) /locus_tag="lmo2669" /note="Uncharacterized membrane protein [Function unknown]; Region: COG4905" /db_xref="CDD:443933" misc_feature complement(<2743380..2743634) /locus_tag="lmo2669" /note="Flagellar motility protein MotE, a chaperone for MotC folding [Cell motility]; Region: MotE; COG3334" /db_xref="CDD:442563" regulatory complement(2744146..2744151) /regulatory_class="ribosome_binding_site" gene complement(2744212..2744574) /locus_tag="lmo2670" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984436" CDS complement(2744212..2744574) /locus_tag="lmo2670" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466192.1" /db_xref="GeneID:984436" /translation="MSDEFAWIREEISGLKGVQYSFKEEWGAERYHVLDQLMAMRGTN KDGHPILTLKCDAEKSEQLRAENPAIVPGYYMNKRVWISVLLEEERDKDLIRALIQHA YSEAKNKLPKYKQAELFD" misc_feature complement(2744221..2744562) /locus_tag="lmo2670" /note="Predicted DNA-binding protein with #double-wing# structural motif, MmcQ/YjbR family [Transcription]; Region: MmcQ; COG2315" /db_xref="CDD:441889" gene complement(2744571..2744939) /locus_tag="lmo2671" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987155" CDS complement(2744571..2744939) /locus_tag="lmo2671" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2671" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466193.1" /db_xref="GeneID:987155" /translation="MINEFVCTNISTQDPAALVAFYHEKLGIPIVFEGYDNYDGAKLG FSEKAPGIIVWNNSKWGEASESKVEFVFSCDTNLDEMYRELQTAGVETPEPCVAEWGG RELNLLDPDGNKIMILEPAQ" misc_feature complement(2744574..2744939) /locus_tag="lmo2671" /note="Lactoylglutathione lyase-related enzyme, vicinal oxygen chelate (VOC) family [General function prediction only]; Region: VOC; COG3324" /db_xref="CDD:442553" regulatory complement(2744582..2744587) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2671" regulatory complement(2744948..2744953) /regulatory_class="ribosome_binding_site" gene complement(2744985..2745791) /locus_tag="lmo2672" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987154" CDS complement(2744985..2745791) /locus_tag="lmo2672" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="AraC family transcriptional regulator" /protein_id="NP_466194.1" /db_xref="GeneID:987154" /translation="MAKLETFYPIVATPKRAGYKEYLPSAALTGYIRCFWEADDKNFP GNNLVVPDLCADIIFTIDSKTGLVTDAIFVGVSDASFESDDESNTELFAVRFYAWSLF LFVEQDLTGSMNRVKEPEEMFAGFVSFFQERFAEMTTNSERIALLEEFLLRKLMMLGK QVHPDFLNSIDKLLQNPNQFVLGAVSVRQLERLFQKHMGLAPKQTAKLIRFQKVLQAL YENPSVPGAELAYLHGFTDQAHLIKQFKRYSNHTPEEMKQIFLQNVANIQ" misc_feature complement(2745480..2745734) /locus_tag="lmo2672" /note="Domain of unknown function (DUF6597); Region: DUF6597; pfam20240" /db_xref="CDD:466391" misc_feature complement(2745018..2745242) /locus_tag="lmo2672" /note="Helix-turn-helix domain; Region: HTH_18; pfam12833" /db_xref="CDD:432818" regulatory complement(2745799..2745804) /regulatory_class="ribosome_binding_site" regulatory 2745892..2745897 /regulatory_class="ribosome_binding_site" gene 2745907..2746377 /locus_tag="lmo2673" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987153" CDS 2745907..2746377 /locus_tag="lmo2673" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466195.1" /db_xref="GeneID:987153" /translation="MSAYKRILVGVDGSNEAEAALRRAVQFAKMDGATLGIGFVADVR RIAPLIDYEQTYAKKAKAYGEELVEMYKKEAEKAGVAHVETFVHFGTPKTTFNKKITR NFEPDLILVGATGLSATEQFILGSVSEYTATHAPCDVIIVHAKPWRNRKTVEKL" misc_feature 2745922..2746332 /locus_tag="lmo2673" /note="universal stress protein (USP) and similar proteins; Region: USP-like; cd00293" /db_xref="CDD:467483" regulatory 2746410..2746415 /regulatory_class="ribosome_binding_site" gene 2746423..2746878 /locus_tag="lmo2674" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987152" CDS 2746423..2746878 /locus_tag="lmo2674" /EC_number="5.3.1.6" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity" /codon_start=1 /transl_table=11 /product="ribose-5-phosphate isomerase B" /protein_id="NP_466196.1" /db_xref="GeneID:987152" /translation="MTVSKVAIASDHGGIELRKSIISYLESVGISYEEFGPETPESVD YPRLAITVSEKVVNQEVDRGILVCGTGIGMSIAANKVKGIRCALVGDTFSAHATREHN DTNVLALGARVIGPGLAEDIVKIWLETEYEGGRHANRVGQITAYEDSHA" misc_feature 2746435..2746875 /locus_tag="lmo2674" /note="Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]; Region: RpiB; COG0698" /db_xref="CDD:440462" regulatory 2746889..2746927 /regulatory_class="terminator" regulatory 2747058..2747063 /regulatory_class="ribosome_binding_site" gene 2747073..2747414 /locus_tag="lmo2675" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986871" CDS 2747073..2747414 /locus_tag="lmo2675" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2675" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466197.1" /db_xref="GeneID:986871" /translation="MSYQDRGMKKWGGFLLSEHTEAMQNAEPTLVWKEAMTTEFIESV LASAMTHQSMLVIQKKPLGPEASPENDIIGRISGVENNTIYIKNSEGIIPLSFSAIRN VEERSVEKWYK" regulatory 2747413..2747418 /regulatory_class="ribosome_binding_site" gene 2747427..2748683 /locus_tag="lmo2676" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986864" CDS 2747427..2748683 /locus_tag="lmo2676" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA polymerase IV" /protein_id="NP_466198.1" /db_xref="GeneID:986864" /translation="MRHVVIFCASILNRFFASVECVKRRLNPLEAYLVVMSNAERAGG LVLAATPKMKQEHHIKTGSRMYELPTWDKRIIIAPPRMKLYLKVNAMIQAIFRRYVPA EFIHVYSIDECFLDVTGSHLLFGSTEEIVRKIQRDILEELRLYVTVGIGDNPLLAKLA LDNVAKNRDDGIAEWRYEHVPETIWKIRHLDDVCGIGRRTAVRLQKMGIFNMYQLSQT PPQVLKNVMGVVGEQLYYHAHGIDYSLLNEKYVPVSKSYGKSQILEKDYHVPAEVEIV IREMVEEVAMRLRQNHVDTAVIHLSVGYSKYSIKKGFSHQAKIPPTSSSHALIPYFLQ LFRRYDEREPVRSIAISCGKITLKTGLQLNLFEDFTQTLNHEQLEITVDKIRSRYGFK SLMHASSLLNGATGLKRSEMVGGHKG" misc_feature 2747463..2748488 /locus_tag="lmo2676" /note="umuC subunit of DNA Polymerase V; Region: PolY_Pol_V_umuC; cd01700" /db_xref="CDD:176454" misc_feature order(2747751..2747753,2747760..2747762,2748006..2748026, 2748111..2748113,2748189..2748206,2748285..2748287, 2748342..2748356,2748360..2748362) /locus_tag="lmo2676" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:176454" gene complement(2748685..2749497) /locus_tag="lmo2677" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984427" CDS complement(2748685..2749497) /locus_tag="lmo2677" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="esterase" /protein_id="NP_466199.1" /db_xref="GeneID:984427" /translation="MHKTIRSVDVYYEKYGEGIPIIMIHGFAPDSQLMIGCMEPVFDK ESSFSRIYLDLPGMGKTENYDSIQNADHVLTLLLEFIEAVIPGEQFVLAGESYGGYLT RGIAAKMPDRVLGVLLICPVIYPEKERRTLPEQKVMYQDDTFVQSLSKGDRAYFSKSG VILTARNWNRFLAEVMAGMINADGEFLDRLSANYELSFDPDEKVQFDVPALFLFGRQD DHVGYADGLTLLEKYPHASIAILDFAGHNLQIEQPKIFTTMVQDFLFRVKPE" misc_feature complement(2748706..2749488) /locus_tag="lmo2677" /note="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; Region: MenH; COG0596" /db_xref="CDD:440361" regulatory complement(2749505..2749510) /regulatory_class="ribosome_binding_site" gene complement(2749538..2750233) /locus_tag="lmo2678" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984408" CDS complement(2749538..2750233) /locus_tag="lmo2678" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="XRE family transcriptional regulator" /protein_id="NP_466200.1" /db_xref="GeneID:984408" /translation="MNSKRLVLIVEDEDGISNFISAVLTASDYSVIKAVNGKEALEQT ASHSPDVVLLDLGLPDMEGLDVLRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYI TKPFGTSELLARIRTALRHIQPSSKESPNDHIIRIQDLYIDDDRRLVKMDDTEIHFTP IEYKILLLLARHAGKVLTHDFIIREIWGPYPSENQALRVNMSNIRRKIEKNPAEPAYI LTEVGVGYRMAEE" misc_feature complement(2749553..2750215) /locus_tag="lmo2678" /note="DNA-binding transcriptional activator KdpE; Provisional; Region: PRK10529" /db_xref="CDD:182522" gene complement(2750230..2752920) /locus_tag="lmo2679" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987151" CDS complement(2750230..2752920) /locus_tag="lmo2679" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="NP_466201.1" /db_xref="GeneID:987151" /translation="METNRPSPDALLVNLQEETDSSVGKLKIYFGFAAGVGKTYAMLS DAKDQLAAGVDVVAGYIEPHARVETLRMLEGIPIISPKAINHKNIALKEFDLDEALKR KPELILVDELAHTNAAGVRNKKRFQDVEELLQAGIDVYTTVNVQHIESLNDIVEGITK VAVRETIPDYVFDEADRVKLIDIEPDELLKRLEQGKIYQPERAQTAMQNFFTRENLKL LREIAMRKAADRISHEYDQTGVYPEKRASSKWLVCIGTSPSSAKLIRWTARTAEAFRA PWTALYIENEENDYMTKAEKKCLRETMELAERLGAEIVTLAGHDIAETVAEYARLTGV TNIVVGKSRRRMGLRSLFEEDFEDRLITHLDNVDMHIIPSSHPKAKKRRMKMRFKSFL TWHDMAKMVLLLALATAICVGLSEFGIGDQNVIMVYILSVLIISRVTSGYVYGVLGSI IGVMLFNFFFTSPLYTFNTIQAGYPVTFGIMLLVALITSALTVRIKTQASLAVERERR TEVLYEINKQLLVTRNLKGIINLTNEYILHLFSRSVIFYSADPAKSNEGIFVQAEGKE DASALLSADEEAVAHWVFKNKKRAGAGTDTLMGAFGYYMPVMSQGKVLGVIGVSCSPE EGPLTQDNRIFLRMISSQVALALERQYLSEEQRQIVIESAKEKMRSNLLRAISHDLRT PLTGIIGASSALLEKEDELDKETERNLIRGIKDDSGWLIRMVENLLSVTRISEGLVSL ERAPEAVEEIVGEAVGRIKKRFRDRTIHVKVPRDLLMVPMDGTLIEQVLINLMENALR HGGTGAEVWVDVTKTKQSAIFSVRDNGKGIPENRLADLFDTFAVEARERSDMSRGLGL GLSICMSIIRAHDGTLEAKNNKHGGATFWFTLPLDGGDGK" misc_feature complement(2750248..2752917) /locus_tag="lmo2679" /note="sensor protein KdpD; Provisional; Region: PRK10490" /db_xref="CDD:236701" regulatory complement(2750243..2750248) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2679" regulatory complement(2752928..2752933) /regulatory_class="ribosome_binding_site" gene complement(2752936..2753508) /gene="kdpC" /locus_tag="lmo2680" /db_xref="GeneID:987150" CDS complement(2752936..2753508) /gene="kdpC" /locus_tag="lmo2680" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="potassium-transporting ATPase subunit C" /protein_id="NP_466202.1" /db_xref="GeneID:987150" /translation="MKRFMQIWKPAVIGFLLLTLVCGVLYPGVVTVFAGVAFHDKANG SIIEEKLADGTTGKVGSAEIGQTFTEPEYLIGRAASDGVATNLNPTSEEQKQLVEKRI AWWHKLDPTNNRVIPMDLVTASASGVDPDISEAAAAYQVDRISRERGISTKEVKEIIA EHTSNRLLGFWGEPTVNVLQVNLALDRLKM" misc_feature complement(2752951..2753484) /gene="kdpC" /locus_tag="lmo2680" /note="K+-transporting ATPase, c chain; Region: KdpC; pfam02669" /db_xref="CDD:460643" regulatory complement(2753516..2753521) /regulatory_class="ribosome_binding_site" gene complement(2753523..2755568) /gene="kdpB" /locus_tag="lmo2681" /db_xref="GeneID:987149" CDS complement(2753523..2755568) /gene="kdpB" /locus_tag="lmo2681" /EC_number="3.6.3.12" /experiment="EXISTENCE:[PMID:19448609]" /note="One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions" /codon_start=1 /transl_table=11 /product="potassium-transporting ATPase subunit B" /protein_id="NP_466203.1" /db_xref="GeneID:987149" /translation="MMEKGIWKDALIQSTKKLSPKLQVKNPVMLLVYVGAILATSLYF LGFFGISDEKSGYTLAIALILWFTVLFANFAEAIAEGRGRAQADSLKMARKDVLARKL KNVDDKTDVIEVASNDLKKGDIVYVLANEQIPMDGEVIEGAASVDESAITGESAPVIR ESGGDRSAVTGGTTLVSDWLVVRVTAVSGESFLDKMIAMVEGASRKKTPNEIALQILL VTLSIIFLAVSATLLPFTEFASKQAGAGSAISITNVIALLVCLAPTTIGALLSSIGIA GMSRLNQANVLAMSGRAIEAAGDVDVLLLDKTGTITLGNRKASEFLPVDGVTEQELAD AAQLSSIADETAEGRSIVVLAKERFDIRGRDFAEMHAEFVPFTATTRMSGIDYQENTI RKGAADAVRAYVTANGGTYPKECDAIVSKVAGAGGTPLVVVRNNQVLGVIYLKDIVKN GVKERFLDLRKMGIKTIMITGDNPMTAAAIAAEAGVDDFLAEATPEAKLELIREYQRE GHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSSPTKLIDIVRIGKQ LLMTRGALTTFSVANDLAKYFAIIPVLFYGIFPQLEALNLMGLTSPTSAILSAIIYNA VIIIVLIPLSLKGVKYREMPAGKLLSRNMLIYGLGGLIAPFIAIKLIDMLLTVLGIV" misc_feature complement(2753526..2755568) /gene="kdpB" /locus_tag="lmo2681" /note="K+ transport ATPase, ATPase subunit KdpB [Inorganic ion transport and metabolism]; Region: KdpB; COG2216" /db_xref="CDD:441818" regulatory complement(2755578..2755583) /regulatory_class="ribosome_binding_site" gene complement(2755580..2757265) /gene="kdpA" /locus_tag="lmo2682" /db_xref="GeneID:987148" CDS complement(2755580..2757265) /gene="kdpA" /locus_tag="lmo2682" /EC_number="3.6.3.12" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions" /codon_start=1 /transl_table=11 /product="potassium-transporting ATPase subunit A" /protein_id="NP_466204.1" /db_xref="GeneID:987148" /translation="MKYIVMQDVFFVVLLLVLAVPLGIYMYKVMIGEKVFLSRVLEPV ERFGYRLMGVSEVGMSAKRYAVSVLAFSAVGFVFVMAVLMLQGFLPLNPEGMKGLSFS LAFNTAASFVSNTNWQAYSGETALSYFSQSIGLTVQNFVSAATGIAVLFAVIRGFIWK KQKTVGNFWQDLFRVTLYILLPLSLILALLLVSQGVVQSFADYSVVETLENGAKQLIP LGPAASQIAIKQLGTNGGGFFGANSAFPFENPSSFTNLIEMLAILLIPVALVVMFGRA VKDSKQGRAIMTAMMIVFVIGVVAITISEQFAGPSYQGVATSGSMEGKEVRFGVGGSS LFAASTTAASNGAVNAMHDSLTPLGGLVPMFFMQLGEVIFGGVGSGLYGMIGFIILTV FIAGLLVGRTPEYLGKKIEPYDMKMVCLLILVPPLLTLFGTAVAVMMPSVQASVSASG AHGFSEVLYAFTSMGNNNGSAFAGFAADTTFTNMVGAVMMLLARFIPLVAALYLAQNM AGKSSVAASSGTLSTKNGMFIGLLIGVVVLVGALSFLPALALGPIADFFTTFK" misc_feature complement(2755592..2757199) /gene="kdpA" /locus_tag="lmo2682" /note="K+-transporting ATPase, KdpA subunit [Inorganic ion transport and metabolism]; Region: KdpA; COG2060" /db_xref="CDD:441663" regulatory complement(2757275..2757280) /regulatory_class="ribosome_binding_site" regulatory 2757592..2757597 /regulatory_class="ribosome_binding_site" gene 2757606..2757911 /locus_tag="lmo2683" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987143" CDS 2757606..2757911 /locus_tag="lmo2683" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS cellbiose transporter subunit IIB" /protein_id="NP_466205.1" /db_xref="GeneID:987143" /translation="MKTIMLVCSAGMSTSLLVTKMEKAAEAQGIEAKIFAVAEAEAAN HLDEIDVLLLGPQVRFLEGNMKKKLEPKGIPLAVINSVDYGMMKGDKVLEQALELMK" misc_feature 2757609..2757908 /locus_tag="lmo2683" /note="Phosphotransferase system cellobiose-specific component IIB [Carbohydrate transport and metabolism]; Region: CelA; COG1440" /db_xref="CDD:441049" regulatory 2758033..2758038 /regulatory_class="ribosome_binding_site" gene 2758046..2759353 /locus_tag="lmo2684" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987141" CDS 2758046..2759353 /locus_tag="lmo2684" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS cellbiose transporter subunit IIC" /protein_id="NP_466206.1" /db_xref="GeneID:987141" /translation="MNGFIAFMEKYFIPYAAKIGGQRHLVAIRDGFITTMPLMILGSF AVLINNFPIPAYQKFMNNLFGEGTWQAFGGNVWNGTFAILALLIAFTVAYNLAKSYDK DPLSSAVVSVATFFTIGAIAPGADGIANTGGLGSTGLFLALIIAILSTEIFTRLSGSP KLIINMPDGVPPAVSRSFAALFPAMITVSIFGLITAFFQAAGVTNLVISFYELVQEPF MGLANSLPAALLLAFVSAFLWFFGLHGANIIDPFMQTINIPAIEANVKALEAGKELPY IVNKPFFDSFVNLGGTGATIGLIIAIFIVARKHKAYMTVSKLSAAPGIFNINEPMMFG LPIVLNPIMFIPYILAPLVLVTVAYFATAIGWVPACTIVTPWTTPPIIGGALATQSIA GGVLAAVNLGLSILIFLPFAKIAQIQELRREKEALAAEGVTAE" misc_feature 2758046..2759323 /locus_tag="lmo2684" /note="Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]; Region: CelB; COG1455" /db_xref="CDD:441064" regulatory 2759375..2759380 /regulatory_class="ribosome_binding_site" gene 2759390..2759692 /locus_tag="lmo2685" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987140" CDS 2759390..2759692 /locus_tag="lmo2685" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS cellbiose transporter subunit IIA" /protein_id="NP_466207.1" /db_xref="GeneID:987140" /translation="MDLEQTIMSLIVFGGNAKSDAMLAIDSAKKGDFAQADEQIAQAE QALLEAHHSQTKLIQGEARGEKTEVSLLLVHAQDHLMNAITFKDLAKEIVDLYKNK" misc_feature 2759402..2759683 /locus_tag="lmo2685" /note="PTS system, Lactose/Cellobiose specific IIA subunit; Region: PTS_IIA; pfam02255" /db_xref="CDD:460510" regulatory 2759704..2759737 /regulatory_class="terminator" regulatory complement(2760068..2760105) /regulatory_class="terminator" gene complement(2760147..2760680) /locus_tag="lmo2686" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986869" CDS complement(2760147..2760680) /locus_tag="lmo2686" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2686" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466208.1" /db_xref="GeneID:986869" /translation="MKEFLFFAVFTFIMTIGVGVINASASEIENPDNIQEAEVETFDL NGNIAQEKEIVLEDGTEGTLGVMPIIDERPLLKGTYSLANGTSTWKIYWYSGVYNCSF NAKINVSKGKGKITSAYNPWYQFYSPGLDVKKSKLSKTSSGSSASYVFDCKNKISNWN VTLKASVSGKKLTTSFK" misc_feature complement(2760150..2760542) /locus_tag="lmo2686" /note="Uncharacterized hexameric protein conserved in Bacilli; Region: Lmo2686_like; cd14247" /db_xref="CDD:271206" misc_feature complement(order(2760150..2760152,2760156..2760161, 2760189..2760194,2760201..2760212,2760213..2760218, 2760222..2760224,2760228..2760230,2760237..2760239, 2760282..2760290,2760294..2760296,2760300..2760326, 2760372..2760374,2760396..2760419,2760438..2760458, 2760465..2760467,2760474..2760503,2760513..2760515, 2760519..2760521,2760525..2760530,2760534..2760536)) /locus_tag="lmo2686" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:271206" regulatory complement(2760688..2760695) /regulatory_class="ribosome_binding_site" gene complement(2760845..2761954) /locus_tag="lmo2687" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987138" CDS complement(2760845..2761954) /locus_tag="lmo2687" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division protein FtsW" /protein_id="NP_466209.1" /db_xref="GeneID:987138" /translation="MKRDVLYNRIILSVFLLSLVSCVAIYYAQQTNQYNTNFLGMQLV FLAIGTLTCFGVSRLPVEFLRHHAIWLYVIMVITLLGILIPNPLVQNINGATRWYRFA GLSFQPSEVVKSIFIFVLAHFAVKYQAQKWKQLGILTVLTGIVLLLIMKQPDLGTTIV YGVTALAIILLAIKSTKLMVGIITLILTAATVGMYVVVYHISLLEKIGFHAYQFSRIQ TWLDPTTDPDAVYQLNLSMKAVGSGMMTGSSGTNAYIPESHTDMIFSTIGHQFGFVGV SLLLILFMVLIHQLIMAALLMKNTFSSLVLAGFAVSFAFNIFENIGMTVGLMPLTGIP LPFISYGGSAVLGNFIAVGVVLAIIRSDADLIEEK" misc_feature complement(2760875..2761927) /locus_tag="lmo2687" /note="Peptodoglycan polymerase FtsW/RodA/SpoVE [Cell cycle control, cell division, chromosome partitioning]; Region: FtsW; COG0772" /db_xref="CDD:440535" gene complement(2761951..2763081) /locus_tag="lmo2688" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985360" CDS complement(2761951..2763081) /locus_tag="lmo2688" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cell division protein FtsW" /protein_id="NP_466210.1" /db_xref="GeneID:985360" /translation="MRAGRVLFVTYLLLAIWSLLLVYSTSYGVAVMRYKVEPSYFFHR QLLFYGLGFLGLLVCSRINVQLFYLRRTLRILAGSLLGLLLLVLLTGSAANNAQRWLS IAGVTFQPTEMVKLLLILVIATVFLKKGCGVRVQYWLLGFLFLTVGLVFLQPDLGTAL ILGVIGVALFLTSGVGLTRLVRVAIWSFGLLLLVAMLIYFFHPDFFSSAKLGRFAFLD PFNLDNLDASYQLRNGYYAIGSGGIFGNGLGGSIQKLGYLPEPHTDFIMTVIAEELGV FGVIWTIFLLMALSFTALYIAISSHFIFDSMVCIGVASWVSVQMFLNLGGVSGIIPLT GVPLPFISYGGSSVVMLSCAVGFVLAAARRNVLAKTREVVYL" misc_feature complement(2761975..2763018) /locus_tag="lmo2688" /note="Peptodoglycan polymerase FtsW/RodA/SpoVE [Cell cycle control, cell division, chromosome partitioning]; Region: FtsW; COG0772" /db_xref="CDD:440535" regulatory complement(2761965..2761970) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2688" gene complement(2763082..2765652) /locus_tag="lmo2689" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987136" CDS complement(2763082..2765652) /locus_tag="lmo2689" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="magnesium-translocating P-type ATPase" /protein_id="NP_466211.1" /db_xref="GeneID:987136" /translation="MKKLHVKKQGNNLLKESQMGKEKVLEKLGVMETGLTNVEVTERL AEFGPNQTVEEKKVSNLRLFIRAFNDPFIYILAMLMVVSYLTDDMEATVIMALMILAS GILGFIQTSRAERASYALKNMVKNRVNVIRNGSMDLVMQDAIVPGDLIEISAGDIIPA DARVISATDLLINQSALTGESIPAEKFVEDKRADPEIFERENLLFMGTDVLSGHGRAV VLRTGSSTFFGSLSIAATERRGDTSFDKGVKSISKLLFYFMMVMVPIVFMINGLMKGN WLEAFLYAVAIAVGLTPEMLPMIVSTNLAKGAINMSKKKVIMKELSAIQNIGAMDILC TDKTGTLTEDKLELIKYIDSAGETSERVLKMAYLNSYFQTGWKNVLDHAVIAKLDEST ASGWKKVGEIPFNFDRRRLSVVVENRAETRMITKGAVEEMLTVCTHKEFGGAVSTLSE SEKSELQDMCAEMNRSGIRVIAVAYKTGKVGEAFTKTDEEQMIIAGFLGFRDPVKAST KEAIAHLFKNQINVKVLTGDNEIVTKRICQEVGIPANGFLLGADIEELSDEELTRELR KYHIFAKLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADITKD ASSVILLEKSLTVLNDAVMEGRNVFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPM LSLHLLLQNLLYDFSQLTLPWDKMDRSFLKKPHQWEQKGMLRFILCIGPVSSIFDIAT FLIMWFVFSANTVAEQALFHSGWFVVGLLTQTLVVHMIRTEKIPFIQSRAAAPVMIAT LSVMALGIIIPFTGFGHSIGFVSLPGSYFPWLILILVGYMATMQLVKTIYIRKFREWI " misc_feature complement(2763088..2765649) /locus_tag="lmo2689" /note="magnesium-translocating P-type ATPase; Region: ATPase-IIIB_Mg; TIGR01524" /db_xref="CDD:130587" regulatory complement(2763090..2763095) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2689" regulatory complement(2765661..2765666) /regulatory_class="ribosome_binding_site" gene complement(2765824..2766078) /locus_tag="lmo2689a" /db_xref="GeneID:16695807" CDS complement(2765824..2766078) /locus_tag="lmo2689a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475645.1" /db_xref="GeneID:16695807" /translation="MQTQATAQKCPKTPMGRTGIVGLRLSIMWLRVFFTLHSAKTLAR GVCFSMRINSEVLAKVLVRTFFHVYYENNYLGIKIFFSDN" gene 2765940..2766104 /locus_tag="lmos93" /db_xref="GeneID:18245111" misc_RNA 2765940..2766104 /locus_tag="lmos93" /product="M-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245111" gene complement(2766207..2766773) /locus_tag="lmo2690" /db_xref="GeneID:987134" CDS complement(2766207..2766773) /locus_tag="lmo2690" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="NP_466212.1" /db_xref="GeneID:987134" /translation="MITNESIMDATLCMMAKHGIKGSTTRQLAEAAGINEATIFKKFK SKDNLIHMTLEVQFESMKAEINQFFDKDFESAKVFLRQASQFISDIYEKYRDFMVISV REMGSKDMEFIDPSIVEYLYERVNEKVKEMVPSKNSAQEADAISLILNSVILLIMVEK VRDDIYKRPPTITTTADSLADVLLKLLK" misc_feature complement(2766297..2766767) /locus_tag="lmo2690" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" regulatory complement(2766781..2766786) /regulatory_class="ribosome_binding_site" regulatory 2766920..2766925 /regulatory_class="ribosome_binding_site" gene 2766935..2768707 /locus_tag="lmo2691" /db_xref="GeneID:987132" CDS 2766935..2768707 /locus_tag="lmo2691" /experiment="EXISTENCE:[PMID:19448609]" /note="cell wall hydrolase; muramidase-2 like protein in Enterococcus faecalis; in Enterococcus faecalis a mutant in this gene has no effect on virulence in mouse models; Listeria monocytogenes MurA in involved in general autolysis; contains an N-terminal muramidase domain and C-terminal LysM repeats for cell wall-anchoring" /codon_start=1 /transl_table=11 /product="autolysin" /protein_id="NP_466213.1" /db_xref="GeneID:987132" /translation="MQKTRKERILEALQEEKKNKKSKKFKTGATIAGVTAIATSITVP GIEVIVSADETAPADEASKSAEANTTKEASATATPENTAKQTVGPQQTETKEQTKTPE EKQAATNQVEKAPAEPATVSNPDNATSSSTPATYNLLQKSALRSGATVQSFIQTIQAS SSQIAAENDLYASVMIAQAILESAYGTSELGSAPNYNLFGIKGAYNGQSYTKQTLEDD GKGNYYTITAKFRKYPSYHQSLEDYAQVIRKGPSWNPNYYSKAWKSNTTSYKDATKAL TGTYATDTAYATKLNDLISRYNLTQYDSGKTTGGNSGSTGNSSNTGNTNTSNAKIYTV VKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKVSAGSTTSDTNTSKPSTGTS TSKPSTGTSTNAKVYTVVKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPGQKLKVSA GSTSNTNTSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNNKVTIANLKAWNN LKSDFIYPGQKLKVSAGSTTNTNTAKPSTNNPSNSTVKTYTVKKGDSLWAISRQYKTT VDNIKAWNKLTSNMIHVGQKLTIK" misc_feature 2766935..2768704 /locus_tag="lmo2691" /note="1,4-beta-N-acetylmuramoylhydrolase; Region: PRK06347" /db_xref="CDD:180536" regulatory 2768747..2768791 /regulatory_class="terminator" regulatory complement(2768891..2768927) /regulatory_class="terminator" gene complement(2768944..2769273) /locus_tag="lmo2692" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984921" CDS complement(2768944..2769273) /locus_tag="lmo2692" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2692" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466214.1" /db_xref="GeneID:984921" /translation="MKLIFAIVQDQDSNRLSDALTKGNFGATKLATTGGFLKAGNTTF IIGTEDERVEDALAIIKENCKAREQMMTPSASLGVTVDTYVPYPIEVQVGGATVFVMP VESFHHF" misc_feature complement(2768947..2769273) /locus_tag="lmo2692" /note="Cyclic-di-AMP receptor; Region: CdAMP_rec; pfam06153" /db_xref="CDD:283747" regulatory complement(2769284..2769289) /regulatory_class="ribosome_binding_site" gene complement(2769381..2770007) /gene="tmk" /locus_tag="lmo2693" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987131" CDS complement(2769381..2770007) /gene="tmk" /locus_tag="lmo2693" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)" /codon_start=1 /transl_table=11 /product="thymidylate kinase" /protein_id="NP_466215.1" /db_xref="GeneID:987131" /translation="MKAIFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSP ISEKVRNIVLGIGNEEMDPKTEVLLIAGARRQHVVETIRPALAAGKSVLCDRFMDSSL AYQGAGRDMNMEQVLQVNLYAIEDTLPDRTYYLDVPAEVGLARIAANKGREVNRLDKE DITYHEKVQAGYEKVINMFPERFMRVDATKTPEEITETILADILRQLA" misc_feature complement(2769384..2770007) /gene="tmk" /locus_tag="lmo2693" /note="Thymidylate kinase [Nucleotide transport and metabolism]; Region: Tmk; COG0125" /db_xref="CDD:439895" regulatory complement(2770015..2770020) /regulatory_class="ribosome_binding_site" gene complement(2770060..2771439) /locus_tag="lmo2694" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987130" CDS complement(2770060..2771439) /locus_tag="lmo2694" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="lysine decarboxylase" /protein_id="NP_466216.1" /db_xref="GeneID:987130" /translation="MRNQSKMPLVERLDAHAKSCPISLHVPGHKSGAIYPDAWQKLLK WDVTEITGMDDLHHPEDVILEAEELLAECYGSKKSYFLVNGTSGGNVAVIMATLKRGE KVLVPRDAHKSILHGIELAGGEPIFLTPATNKEVGVASGVTTELLEETLHNHPDVKLC IFTYPSYYGTTFNLQKCIRIAHDFGAVVFVDEAHGAHFLTSSEFPKSAVELGADVVVQ SAHKTLPALTMGSYLHVVNDLPIFEKLAYYLQVFQTSSPSYLIMASLDAARKYVATYT AADVEAFWKMRARWIKWLTKNKFEVILPDDPLKIIVRKTGYTGYELQAIFEESSYFPE LADESQVLLILPLIKKGIDFTPISRIHSPMKKEIAKEPYEMSTPCASGLALTYEEMHA RATEFVLLDEATTRVSAETISLYPPGIPAIIRGEGITEKHIRELKNIRTRHYQGGEKL AENYIRVFR" misc_feature complement(2770063..2771439) /locus_tag="lmo2694" /note="Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism]; Region: LdcC; COG1982" /db_xref="CDD:441585" regulatory complement(2771447..2771452) /regulatory_class="ribosome_binding_site" regulatory 2771606..2771611 /regulatory_class="ribosome_binding_site" gene 2771623..2772612 /locus_tag="lmo2695" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987129" CDS 2771623..2772612 /locus_tag="lmo2695" /experiment="EXISTENCE:[PMID:19448609]" /note="with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase subunit DhaK" /protein_id="NP_466217.1" /db_xref="GeneID:987129" /translation="MKKILNGTDQVVEQMVEGLVKSHADVVHRVEGTRVIARNDKRPG KVGLVSGGGSGHEPAHAGYVGRGMLSAAVCGDVFTSPTPDQIYEGIKAADQGAGVLLI VKNYTGDVMNFEMAADLADADDIKVEQIVVDDDIAVEDSTFTTGRRGVAGTVLVHKII GAAAEAGASLDELKALGEKVIASVKTLGVALSPCTVPEVGHPGFELGDDEIELGIGIH GEPGFTREKIMPSASLAKQLYERISNESKLLAGDKVVVLVNGMGATPLMEQYVFANDV HELLKNAGVQVEKTLVGDYMTSLEMAGLSLTILKLEDEKWVDMLKLPVDTIAW" misc_feature 2771623..2772609 /locus_tag="lmo2695" /note="dihydroxyacetone kinase subunit DhaK; Provisional; Region: PRK14481" /db_xref="CDD:237724" regulatory 2772620..2772625 /regulatory_class="ribosome_binding_site" gene 2772634..2773230 /locus_tag="lmo2696" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987127" CDS 2772634..2773230 /locus_tag="lmo2696" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase" /protein_id="NP_466218.1" /db_xref="GeneID:987127" /translation="MTYDKDWALRWLNDFGERVQENKQLLSDLDQAIGDGDHGINMAR GLGELKKAFTEKEPADLKDVFKTAGMTMVSKVGGASGPLYGTAFLNMSKAVDADTIDA VGLTKVIEAGLEGIEKRGKSHAGEKTMIDVWEPVVHALHQEDLTDDVVDAALQKTKDL KATKGRASYLGERSIGHLDPGAYSSALLFHAMLQTEVS" misc_feature 2772658..2773209 /locus_tag="lmo2696" /note="dihydroxyacetone kinase, phosphoprotein-dependent, L subunit; Region: dha_L_ycgS; TIGR02365" /db_xref="CDD:274099" regulatory 2773220..2773225 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2696" gene 2773234..2773608 /locus_tag="lmo2697" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987124" CDS 2773234..2773608 /locus_tag="lmo2697" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannose transporter subunit IIA" /protein_id="NP_466219.1" /db_xref="GeneID:987124" /translation="MAKPYGVVIISHSKDVAKGVHDIIKEIAPDVSITHAGGTEDGRI GTSFDAVNEAIENNEANKVYTFYDLGSAKMNIETVEEISEKEIILFNAPILEGAYATA AQVQMDEKPEVIAANLKTIEIK" misc_feature 2773243..2773605 /locus_tag="lmo2697" /note="phosphotransferase mannnose-specific family component IIA; Provisional; Region: PRK14484" /db_xref="CDD:184702" regulatory 2773619..2773659 /regulatory_class="terminator" regulatory 2773701..2773706 /regulatory_class="ribosome_binding_site" gene 2773714..2774565 /locus_tag="lmo2698" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987122" CDS 2773714..2774565 /locus_tag="lmo2698" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="RpiR family transcriptional regulator" /protein_id="NP_466220.1" /db_xref="GeneID:987122" /translation="MNILIKIRELTNLTNSEKELANYILANPKKTLQFKPKELATAAF VSAATIYRLINKLGLNGIGELKIEIASSLRETSEEKDLNYDYPILESDTPYQIMTNLH QIYKGTIDETLNNADPEELVKIGEKLIQAKTIDVYAASANLFFAQNFKFQMQEIGVLV NVPEEDYIQSLSAANSDENHIAIVVSYGGRSRTLQRVVKILSENNVDIILITSMQDNP LVEFATHKIYMASAENHYNKVSSFSTRQSLLSIFDTLYSIYFNQNYEKNIQYKTTNYQ KMNTELE" misc_feature 2773714..2774523 /locus_tag="lmo2698" /note="DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains [Transcription]; Region: RpiR; COG1737" /db_xref="CDD:441343" regulatory 2774669..2774674 /regulatory_class="ribosome_binding_site" gene 2774684..2775523 /locus_tag="lmo2699" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987121" CDS 2774684..2775523 /locus_tag="lmo2699" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466221.1" /db_xref="GeneID:987121" /translation="MTTQAIILDIDGTLLNDDKQISPETKKALITAQENGVKLILASG RPTTGMHVYAEQLEMEKHHGLLVSYNGAKVVDCATNEELFNQALTVEEGKAVLEHMKQ FEVKVMIDKEDYMYTNDVYDCYVPYRGEEINIIQYESRGGNFKLCEKDDLAAFLDYRL SKILTAGDPAYMQKNYQAMMAPFKDTLNCVFTADFYFEFTAQGIDKAKALDTVLTPMG IHAENVIAFGDGHNDITMVEYAGTGIAMQNAVPELKAAASSVTLSNNEDGIAHVLNSL IPS" misc_feature 2774699..2775505 /locus_tag="lmo2699" /note="phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily; Region: HAD_Pase; cd07516" /db_xref="CDD:319818" misc_feature order(2774708..2774722,2774810..2774815,2775299..2775301, 2775365..2775373,2775377..2775382) /locus_tag="lmo2699" /note="active site" /db_xref="CDD:319818" regulatory 2775531..2775556 /regulatory_class="terminator" regulatory 2775630..2775635 /regulatory_class="ribosome_binding_site" gene 2775644..2776486 /locus_tag="lmo2700" /db_xref="GeneID:987120" CDS 2775644..2776486 /locus_tag="lmo2700" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="aldo/keto reductase" /protein_id="NP_466222.1" /db_xref="GeneID:987120" /translation="MTLSFSDTYRLNNGIEMPRHGFGVYKLTDEARMRTALETAVDVG YRLFDTASFYHNEKELGDFFASSGLKRDEFFVTTKMWNTEQGYDETLRAFEKSQKKLQ LDQIDLYLVHWPKQDTFFDTWRAVEKLYDEGLVRAIGVSNFEAHHLDRLRTSANVLPV VDQLETHPHFPNHLLHRYLEELHIVHQAWSPLGRGGVLQEQILIDLAEKHGKSPAQIV LRWHLQNNISIIPKSETPSRIRENAAIYDFELSEADMRQVERLNTGERVSHAPDVMYV RSEI" misc_feature 2775680..2776459 /locus_tag="lmo2700" /note="Aldo/keto reductase, related to diketogulonate reductase [Secondary metabolites biosynthesis, transport and catabolism]; Region: ARA1; COG0656" /db_xref="CDD:440421" regulatory 2776500..2776537 /regulatory_class="terminator" regulatory complement(2776500..2776526) /regulatory_class="terminator" gene complement(2776532..2776777) /locus_tag="lmo2701" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987119" CDS complement(2776532..2776777) /locus_tag="lmo2701" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466223.1" /db_xref="GeneID:987119" /translation="MESRSNKFGRKKNKKIGKLHKSYDAYLMELIEVTQENWHKQKVL MRKSFEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK" misc_feature complement(2776538..2776744) /locus_tag="lmo2701" /note="Protein of unknown function (DUF2508); Region: DUF2508; pfam10704" /db_xref="CDD:431448" regulatory complement(2776785..2776790) /regulatory_class="ribosome_binding_site" gene complement(2776792..2777388) /gene="recR" /locus_tag="lmo2702" /db_xref="GeneID:987118" CDS complement(2776792..2777388) /gene="recR" /locus_tag="lmo2702" /experiment="EXISTENCE:[PMID:19448609]" /note="involved in a recombinational process of DNA repair, independent of the recBC complex" /codon_start=1 /transl_table=11 /product="recombination protein RecR" /protein_id="NP_466224.1" /db_xref="GeneID:987118" /translation="MHYPEPITKLIDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFA KALVDAKRNLSFCSVCGHITDKDPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHG LYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLL KPSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRREV" misc_feature complement(2776801..2777385) /gene="recR" /locus_tag="lmo2702" /note="Recombinational DNA repair protein RecR [Replication, recombination and repair]; Region: RecR; COG0353" /db_xref="CDD:440122" regulatory complement(2777396..2777401) /regulatory_class="ribosome_binding_site" gene complement(2777497..2777814) /locus_tag="lmo2703" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987117" CDS complement(2777497..2777814) /locus_tag="lmo2703" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466225.1" /db_xref="GeneID:987117" /translation="MRGMGNMQGMMKQMQKMQKEMAKAQADLEAQEFTGTAGGGMVTV KATGKRVITDVVINEEVVDPEDIEMLQDLVLAATNDVLKQIEDTTSQTMGKFTQGLNI PGM" misc_feature complement(2777500..2777775) /locus_tag="lmo2703" /note="DNA-binding nucleoid-associated protein YbaB/EfbC [Transcription]; Region: YbaB; COG0718" /db_xref="CDD:440482" regulatory complement(2777824..2777829) /regulatory_class="ribosome_binding_site" gene complement(2777844..2779583) /gene="dnaX" /locus_tag="lmo2704" /db_xref="GeneID:987116" CDS complement(2777844..2779583) /gene="dnaX" /locus_tag="lmo2704" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit gamma/tau" /protein_id="NP_466226.1" /db_xref="GeneID:987116" /translation="MAYQALYRVFRPQSFQDVVGQEHVTKTLKNAIVQNKTSHAYLFS GPRGTGKTSAAKIFAKAINCEHGHDGEPCNECEICKGTTDGSIPDVLEIDAASNNGVE EIRDIREKVKYAPTVAKYKVYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTEPH KLPLTIISRVQRFDFKRITTQDIIGRLKFILEEEKIPYDEKALMIVARAAEGGMRDAL SLLDQVISYGSEEVTVEDALEITGSVAQNLLTKLVSAAFDGDAAEAISTLTALLAEGK DPVRLVEDLLVFFRDVLLYQKAPNLEETMERALIDDDFVALAKRADSLKVYEFVKILN TAQQQMRFSNHPGIYVEVALVQLTQAGQSVAGGGNVPADAASGSDVSDLKRQMEQMHQ EIQTLKKQIASGAGAAPADKPTQNRGGSKKAINNGKQFKAPIGKINHVLGEAKKENLQ LIRGCWGELLSMLMASQAALLNDAEPVAASQDTFVLKFKHEIHCQMAMDNPNFVETIT SSIARLTQVNYTFIGIPEDQWADVRENFLHSHGSDADAEDGANPEAKKPAEDPFVAEA AKLVGEDLLEIKD" misc_feature complement(2777847..2779583) /gene="dnaX" /locus_tag="lmo2704" /note="DNA polymerase III subunits gamma and tau; Validated; Region: PRK05563" /db_xref="CDD:235505" regulatory complement(2779591..2779596) /regulatory_class="ribosome_binding_site" regulatory complement(2779864..2779902) /regulatory_class="terminator" gene complement(2779910..2780374) /locus_tag="lmo2705" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984440" CDS complement(2779910..2780374) /locus_tag="lmo2705" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2705" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466227.1" /db_xref="GeneID:984440" /translation="MNVTQKLYISQKECFDTLVSSAIYDVKNATGKTLQVRKLEGYKY QRTMSNGALATTKIVKVQPNELYQFETSSRVNTHTTTYTIKSTSETTCEVTYNELIET EKALNKMNNIIVGFMFGFFRKKRVKNLLKSIELSVINESKQKQEKLAAKSEQ" misc_feature complement(2780027..2780371) /locus_tag="lmo2705" /note="Domain of unknown function (DUF3284); Region: DUF3284; pfam11687" /db_xref="CDD:463322" regulatory complement(2780385..2780390) /regulatory_class="ribosome_binding_site" gene complement(2780392..2780574) /locus_tag="lmo2706" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987115" CDS complement(2780392..2780574) /locus_tag="lmo2706" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2706" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466228.1" /db_xref="GeneID:987115" /translation="MKIVNALFLISIGLIIIMFSPSYGKDGMASVPLLVTGLAVVLIG CVFIVLKIRKDKKEKN" misc_feature complement(2780413..2780562) /locus_tag="lmo2706" /note="Protein of unknown function (DUF3188); Region: DUF3188; pfam11384" /db_xref="CDD:431859" gene complement(2780577..2780798) /locus_tag="lmo2707" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984953" CDS complement(2780577..2780798) /locus_tag="lmo2707" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2707" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466229.1" /db_xref="GeneID:984953" /translation="MIILNCPMKRDYITELLETYDKDGVTFKKIDEKGMKLTFETNIE DEEKAAKIAKETIKATEIGSVLYFQVSVG" regulatory complement(2780582..2780588) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2707" regulatory complement(2780808..2780813) /regulatory_class="ribosome_binding_site" gene complement(2780933..2782297) /locus_tag="lmo2708" /db_xref="GeneID:987113" CDS complement(2780933..2782297) /locus_tag="lmo2708" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS cellbiose transporter subunit IIC" /protein_id="NP_466230.1" /db_xref="GeneID:987113" /translation="MNGLTAFLEKYFVPVAAKIGSQKHLVALRDAFISTMPITMAGSI AVLLNAFFRDFPTDWGWTGFVEAMQPLIGINGYVYNGTLAIVSIIFAFSLGYNLSKAY EVDRLAGGLVSLAAFVMNLTVTVSLDAVKAAIAASNANFDVATLPKEFAGIYGFFSLS QVNGTGLFTAMIFGFISTIIYAKLMRRNIIIKMPDSVPPAVSKAFAAIIPALVALYVV GIIDWAFFKITNMDVITWISKTIQEPLLSLSQGYGAVLLVTFLVQLLWFFGIHGPNVL APVLESLWGTAQLQNISAAQEGAKLPFEWVRGSFDAYVWMGGSGGTLVLIIALLMFSK RADARTVAKLSLAPGIFNINEPIMFGLPIVLNTIYLIPFLIAPMVMVTIAYFATTLGI VGPVKIAVVWVMPPLLNSFLATGGDWMAPVISLINMVVAFLIWVPFVITANRVGVPEE EMKA" misc_feature complement(2780936..2782297) /locus_tag="lmo2708" /note="Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]; Region: CelB; COG1455" /db_xref="CDD:441064" regulatory complement(2782305..2782310) /regulatory_class="ribosome_binding_site" regulatory 2782725..2782730 /regulatory_class="ribosome_binding_site" gene 2782739..2782894 /locus_tag="lmo2709" /db_xref="GeneID:987112" CDS 2782739..2782894 /locus_tag="lmo2709" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2709" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466231.1" /db_xref="GeneID:987112" /translation="MAVKRDMPEESKNSKVVKKEHFSIVFPDDIKEPATVEEKKKQDA EKKTDDN" regulatory 2782946..2782994 /regulatory_class="terminator" gene 2783098..2783274 /locus_tag="lmos94" /db_xref="GeneID:18245177" misc_RNA 2783098..2783274 /locus_tag="lmos94" /product="rli50" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245177" regulatory complement(2783431..2783461) /regulatory_class="terminator" gene complement(2783466..2784107) /locus_tag="lmo2710" /db_xref="GeneID:987111" CDS complement(2783466..2784107) /locus_tag="lmo2710" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2710" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466232.1" /db_xref="GeneID:987111" /translation="MQQLKSKKKWLPALIVAVFVGIIVILAIMFGFFQRQEVFDKYEV AYEIDGKLYEVFPISATDIGVDKKSKDKNLYFRVNSYYNIDYLFRLAYKQYEINEPST NKYYSGLIDYSVADNAYVTQKDVYITNNESYATYDFFDKNGKKIYTYNPEETSNDDYI VRIKPTILQGYEKSDIGSYDDYLNITALFKDKLGMDVNVRIDEDKEMVIFSIK" regulatory complement(2784114..2784119) /regulatory_class="ribosome_binding_site" gene 2784272..2784604 /locus_tag="lmos95" /db_xref="GeneID:18245178" misc_RNA 2784272..2784604 /locus_tag="lmos95" /product="SRP" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245178" regulatory 2784339..2784344 /regulatory_class="ribosome_binding_site" /locus_tag="lmos95" gene 2784354..2784674 /locus_tag="lmo2711" /db_xref="GeneID:987108" CDS 2784354..2784674 /locus_tag="lmo2711" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466233.1" /db_xref="GeneID:987108" /translation="MLLPSGPDMVHRFPLRKTQPSTPLVKGRPNNYDASNEEFNPARA DCGLQGAATSPSSTTNLLPIIKCQIKNYLAQTLKRAQLLVYLFHLKSASGNTEIFFNV SKHS" gene complement(2784805..2786319) /locus_tag="lmo2712" /db_xref="GeneID:987107" CDS complement(2784805..2786319) /locus_tag="lmo2712" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="gluconate kinase" /protein_id="NP_466234.1" /db_xref="GeneID:987107" /translation="MTSKPYIMGVDIGTSSTKAVLFNQRGEVIFRQATHYELITDETG KAEESPTEIFDAVLTSIQAVMKNINTEELAGISFSSAMHSLIMVGSNGELLTECITWA DGRSSETLEKVKRDNYLFQLYEATGTPIHPMSPFAKICWLKEEKPTLFKRTEKFVDIK SYILYRLFGVWVMDESLASGTGLYNIMEHDWEFEAMEIVKLTPDFLPKVVPETYQLAG VKKEYAELMGIPENLPFIIGGSDGALANIGIQATGQNDVTITVGTSGAVRKLTDQFQI DSRGRTFCYGAGDGYFIAGGAVNNGGKVVEWGLQQFGSEAEISRRDFASFIAKIEEVP PGAAGLLFQPYLLGERAPFWTNDIRGGFVGLTINHTKAHFIRAILEGVAFNLAEVYEA VSAPDDIIYVTGGISAHDAWCKLLADILNREIRVPHTIEGSSLGAAIIGMRSLGILKD LNLKHTLPIKAVYHPSENVLKYAELRLIFKQVTTQLMSSYSQLNSWQKKFDINS" misc_feature complement(2784874..2786304) /locus_tag="lmo2712" /note="nucleotide-binding domain (NBD) of gluconate kinase (GntK) and similar proteins; Region: ASKHA_NBD_FGGY_GntK; cd07770" /db_xref="CDD:466790" regulatory complement(2786326..2786331) /regulatory_class="ribosome_binding_site" regulatory complement(2786405..2786434) /regulatory_class="terminator" gene complement(2786435..2787373) /locus_tag="lmo2713" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987105" CDS complement(2786435..2787373) /locus_tag="lmo2713" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_466235.1" /db_xref="GeneID:987105" /translation="MKKLLSGLIVVLMVSLLGHSFNAEAASYEKIIYDKAVNLKGVVN QSKRNDGINSKMYKTSSSVKYLGSAKKYDKKTLIITREGKTARAKWYYCKLGNTTIGW IDSRAFTNIGKPTIADAVPALWNSKKAIITTKPKSTTATTYFFQKNSAGNWYEVRHFT SHIGKWGFDPKFSEKSSGTPVGVYRTGIAFGQKGNPGTKLTFRAITNRSYWISNSNDK AYNTWQERNSSSSADEKMKIPQYKYGMEVKYNAKRVKGKGSAVFYHVDSPKYNYTLGC VAQSEANTKEVLKFADKNTLIVLGEESRIKTFYGIN" misc_feature complement(2787041..2787289) /locus_tag="lmo2713" /note="GW domain; Region: GW_glycos_SH3; NF033202" /db_xref="CDD:380204" misc_feature complement(2786474..2787019) /locus_tag="lmo2713" /note="L,D-peptidoglycan transpeptidase YkuD, ErfK/YbiS/YcfS/YnhG family [Cell wall/membrane/envelope biogenesis]; Region: COG3786" /db_xref="CDD:443000" regulatory complement(2787379..2787384) /regulatory_class="ribosome_binding_site" gene complement(2787416..2788363) /locus_tag="lmo2714" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987103" CDS complement(2787416..2788363) /locus_tag="lmo2714" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="pepdidoglycan bound protein" /protein_id="NP_466236.1" /db_xref="GeneID:987103" /translation="MKKFHGLILTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTD TTENIITEEKTEPAEPTKDTTVTPPQKSKVQTTIDITDSQEVYSYEQNSKIDLKDFTA TLTDYTDTKLTNYRLAANSKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQL TITDMNFDLETKIFTGKTKPFASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQI TAYAFDESGNYSEEVTYQVPAKKQNEAVVTAPDKVKKIETKNAVKSATTKPTDVTKVT KDDKTDLPSTGDKGTEWIFVVAGVIVILVAVLLLRKRKK" misc_feature complement(2787419..2787517) /locus_tag="lmo2714" /note="LPXTG-motif cell wall anchor domain; Region: LPXTG_anchor; TIGR01167" /db_xref="CDD:273478" regulatory complement(2788372..2788377) /regulatory_class="ribosome_binding_site" regulatory complement(2788461..2788495) /regulatory_class="terminator" gene complement(2788504..2790243) /gene="cydD" /locus_tag="lmo2715" /db_xref="GeneID:984392" CDS complement(2788504..2790243) /gene="cydD" /locus_tag="lmo2715" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_466237.1" /db_xref="GeneID:984392" /translation="MRKSSWIIPYIKENRGLFLLVIFLGTLTFASAGALMFTSGHLIS KSSLMPESIMAVYISTVGVRAFGIMRSVSRYVERLSSHSLVLRILEKMRVRLYRLLEP QALLLKSRYKTGDILGLLAGDIEHLQNFYLTTMLPAIVSLVLYAGVVIALGAFSIPFA ALFVLLIGLLVLVLPWVSLLYARGKNAYLKQGRNSLYQKFTDAVFGISDWKFSGREKT FISNYEKDEADMLRTENKQFHFVNWRDFFSQLVVGFMVIVMVYWSTAESRDGAFSGTL IAAFVLAIMALAEAFVPVSSAISDKSLYQDSLARLDKIEDPALPTFEEETKEIERINT ENVVLKAENLTFAYDEKSPEILNGFDFTLQQGEKVAIIGRSGTGKSTFLKLVQGALLP TAGKVTMNDVEVEKLRPQIPELTSMLNQKAHLFSTTVLNNIRLGNQDASDEEVYEAAK KVQLHDFIMSMPDGYHTQMSEMGERFSGGERGRIALARILLQNTPIVILDEPTVGLDP ITERDLLATIFETLADKSLIWVTHHLVGAEKMDRVLFLEEGKTLMEGPHAELMAEEPR YKRLYQLDRPIEL" misc_feature complement(2788525..2790231) /gene="cydD" /locus_tag="lmo2715" /note="ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]; Region: CydC; COG4987" /db_xref="CDD:444011" gene complement(2790243..2791967) /gene="cydC" /locus_tag="lmo2716" /db_xref="GeneID:986034" CDS complement(2790243..2791967) /gene="cydC" /locus_tag="lmo2716" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter" /protein_id="NP_466238.1" /db_xref="GeneID:986034" /translation="MGKDLRNYKGIKKIMAILAVFTLVQGAAIIVMAITLARAITDLF HEHPFQSVTIQIGLFAGAYFLRHFLNVWKKQIVYRYAAKLAKTMREELLDSLFALGPR FARAEGTGKVVTMVMEGVADFRNYLELFLPKMMNMAIIPAMIWVYIAFQDWTSAFILM ITLPILIVFMIILGLAAKKQADSQFETYRVLSNHFVDSLKGLETLKYLGLSHDHEGKI ASVSSRYRKATMKTLRVAFMSSFALDFFTMLSIALVALFLGLGLIDGNMNLPIALSVL ILAPEYFLPVREVGSDYHATLDGQEAGRVIQGIIDQAKAEKPEMDALPLTTFAENTEF SFENITVKHGADDADSLHKASFTVKGFEKIGIIGATGAGKSTLIDVLSGFLTPTSGEF HWNGKSGASLASTDWQTQVTYIPQHPYLFHDTIAGNIRFYHPNSTEDEMKKAAESAGL NKLVAGLEDGYETLVGEAGRMLSGGQEQRVALARAFLTDRPVVLMDEPTAHLDIETEY ELKKPMLDLFEDRLVFFATHRLHWMLEMDRIIVLDHGAVVETGTHEELLSRKGFYYNL VKAQLEEV" misc_feature complement(2790285..2791955) /gene="cydC" /locus_tag="lmo2716" /note="ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]; Region: CydD; COG4988" /db_xref="CDD:444012" regulatory complement(2790251..2790256) /regulatory_class="ribosome_binding_site" /gene="cydC" /locus_tag="lmo2716" gene complement(2791967..2792980) /gene="cydB" /locus_tag="lmo2717" /db_xref="GeneID:987101" CDS complement(2791967..2792980) /gene="cydB" /locus_tag="lmo2717" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cytochrome D ubiquinol oxidase subunit II" /protein_id="NP_466239.1" /db_xref="GeneID:987101" /translation="MSLNELWFLLIAILFIGFFFLEGFDFGVGMSTRFMARNALERRV LVNTIGPFWDANEVWLLTAGGAIFAAFPNWYATMFSGYYIPLVFLLLALIGRGVSFEF RGQKDSPLWIKTWDWVIFFGSILPPFLFGVLFASLIQGMPINSDMDMYAGFFDYITVF SVWGGVTITLMCLLHGLLFITLRTEEDIQDRARRMAKRVWFITVPALVIFVVLAYFNT DMFQVRPVLVPLMIGIVVVMYVLSALFIWKDRDILAFTFGGLGIVFTIATIFVSLFPR VMISSINSAFDLTIENAASGQYSLSVMTIVAVTLLPFVLGYQIWSYYVFRKRVSSKEK MTY" misc_feature complement(2791982..2792974) /gene="cydB" /locus_tag="lmo2717" /note="Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]; Region: AppB; COG1294" /db_xref="CDD:440905" regulatory complement(2791981..2791986) /regulatory_class="ribosome_binding_site" /gene="cydB" /locus_tag="lmo2717" gene complement(2792967..2794373) /gene="cydA" /locus_tag="lmo2718" /db_xref="GeneID:987099" CDS complement(2792967..2794373) /gene="cydA" /locus_tag="lmo2718" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="cytochrome D ubiquinol oxidase subunit I" /protein_id="NP_466240.1" /db_xref="GeneID:987099" /translation="MDKLFLARFQFASTTIFHFLFVPLSIGLVFMVALMETLYVVKGK EIYKKMSKFWGHIFLINFAVGVVTGIIQEFQFGMNWSDYSRFVGDVFGAPLAIEALLA FFMESTFIGLWIFGWDKLGKKLHLACIWLVSIGTIMSSFWILAANSFMQHPVGFEFKN GRAEMNDFLQLITNGQLLVEFPHVIFGAFATGAFFIAGVSAYKMLKKQDVAFFKRSFQ IAMVMAVIGGFGVAFSGHSQAQYLVKTQPMKMAATEGIWEDTADPAPWTMIAKINPEE KKNEWEVNVPYALSFLSYGTLTGSVEGMNTLQKQYEEKYGEGDYIPPVKTAFWSFRIM VGAGMLMILFALIGIVLAWKKKLVNAKWYLRFMIPMIGFPFLANSMGWIMTEIGRQPW VVFGYMKTADAVSPNVSSGQILFSIIAFSTIYTILAILLVYLFIREIKKGPDGHKPEK AEISVDPFDKGDESFVTK" misc_feature complement(2793018..2794373) /gene="cydA" /locus_tag="lmo2718" /note="Cytochrome bd-type quinol oxidase, subunit 1 [Energy production and conversion]; Region: AppC; COG1271" /db_xref="CDD:440882" regulatory complement(2792990..2792995) /regulatory_class="ribosome_binding_site" /gene="cydA" /locus_tag="lmo2718" regulatory complement(2794382..2794387) /regulatory_class="ribosome_binding_site" gene complement(2794755..2795225) /locus_tag="lmo2719" /db_xref="GeneID:987096" CDS complement(2794755..2795225) /locus_tag="lmo2719" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466241.1" /db_xref="GeneID:987096" /translation="MERAFFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRE TSQNAVTHAELLAIQDACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAK DPKAGTAGSLMNLLQDDRFNHTCEVEAGLMESESSEMLKSFFQELRKRNKSNRS" misc_feature complement(2794785..2795225) /locus_tag="lmo2719" /note="tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]; Region: TadA; COG0590" /db_xref="CDD:440355" regulatory complement(2795233..2795238) /regulatory_class="ribosome_binding_site" regulatory 2795408..2795413 /regulatory_class="ribosome_binding_site" gene 2795420..2796997 /locus_tag="lmo2720" /db_xref="GeneID:987095" CDS 2795420..2796997 /locus_tag="lmo2720" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="acetate-CoA ligase" /protein_id="NP_466242.1" /db_xref="GeneID:987095" /translation="MNSENLIAPELYNITDEIAKFSSEKTALIWKNEHGETKTWSYHH LLEQANKFANVAKDAGIKKGDHVIVMTPRLLETYAIYMGLWKAGAIIIPASELLKAHD LEYRIHHANVKAIVSYNGMTAEFDKIESIPSVSKKIIVGDKLSGWEQYETLMEAAPTE FERVETSRDDACLLAFTSGTTGNPKGVVHIHGWGYAHIRIAADHWLDIHEDDIVWATA GPGWQKWVWSPFLSVLGKGATGFIYNGRFIPEKQLHLLEEEKINVLCCTPTEYRLMAK VNNLREHDLSSLRSAVSAGEPLNREVIQVFRDNFDIKVRDGYGQTESTLLIGTLVDTP IRPGSMGKPIMPEYMAIIDADGNPVGVGEIGDIAMRRDFPALFKEYYKEPERLQKAIR GDYFVSGDRAIRDEDNYYWFQGRNDDIIISSGYTIGPFEVEDALTHHPAVKEVAVVAS PDEIRGTVVKAFIVVKDGYKGTDDLVHELQTFTKEQTAPYKYPRRIEFVEALPKTDSG KIRRVELRDAEFASVHG" misc_feature 2795453..2796976 /locus_tag="lmo2720" /note="Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase [Lipid transport and metabolism]; Region: Acs; COG0365" /db_xref="CDD:440134" regulatory complement(2796994..2797031) /regulatory_class="terminator" regulatory 2797005..2797042 /regulatory_class="terminator" gene complement(2797039..2797758) /locus_tag="lmo2721" /db_xref="GeneID:984959" CDS complement(2797039..2797758) /locus_tag="lmo2721" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="6-phosphogluconolactonase" /protein_id="NP_466243.1" /db_xref="GeneID:984959" /translation="MKIIVEKDYENMSKTTMQLLLGKMYQDKKVHLAITAGSTPKRMY ELMVEEMKEKAPLKNVSYYNFDEIPIGDEKYGVTIANLKAMYFDPAGIPEEQIHMLDT KNYVEHEARLKEVGGLDAILIGIGEDGHFCGNLPGVTKFGDETRLVSVQSRPDMFDIL LGEVGGDVEKVPEYYVTMGPKSVMHAKEVILFANGKKKAAIIKKALQGPVTEDIPSSI FQLHPNFTVVLDEEAASELNI" misc_feature complement(2797042..2797758) /locus_tag="lmo2721" /note="glucosamine-6-phosphate deaminase; Region: PRK12358" /db_xref="CDD:183470" misc_feature complement(order(2797165..2797167,2797285..2797287, 2797363..2797365,2797369..2797371,2797384..2797389, 2797561..2797566,2797642..2797653)) /locus_tag="lmo2721" /note="active site" /db_xref="CDD:238693" misc_feature complement(order(2797093..2797101,2797123..2797143, 2797312..2797314,2797339..2797344,2797348..2797350)) /locus_tag="lmo2721" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:238693" misc_feature complement(order(2797312..2797323,2797342..2797347)) /locus_tag="lmo2721" /note="allosteric site [active]" /db_xref="CDD:238693" misc_feature complement(order(2797243..2797251,2797258..2797266, 2797282..2797305)) /locus_tag="lmo2721" /note="active site lid [active]" /db_xref="CDD:238693" misc_feature complement(order(2797048..2797059,2797066..2797068, 2797159..2797161,2797171..2797173,2797297..2797299)) /locus_tag="lmo2721" /note="hexamer (dimer of trimers) interface [polypeptide binding]; other site" /db_xref="CDD:238693" regulatory complement(2797767..2797772) /regulatory_class="ribosome_binding_site" regulatory 2797826..2797831 /regulatory_class="ribosome_binding_site" gene 2797838..2798572 /locus_tag="lmo2722" /db_xref="GeneID:985237" CDS 2797838..2798572 /locus_tag="lmo2722" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MerR family transcripitonal regulator" /protein_id="NP_466244.1" /db_xref="GeneID:985237" /translation="MEPLFSIGEMAKKSQLSIQRLRYYDKIGLLVPAFTDPTSGYRYY KTAQEEQLNLIQALQYMGFSLQELKQYLDKNTMESLPDLLIKYQQKLKDEEARIARKK WLIDRYQDLLKRETDSTKLLTAARLLLTEPLLTPVHVDILNDPDFHQEVQKTVSHLGL SKSYQQFPGYCVLDGQTYLFIELDHSIGAPGERRLLASERQAFVTPQNWKTPSENENY LLQETVAWINQELVRGYSYETKLTFE" misc_feature 2797850..2798173 /locus_tag="lmo2722" /note="Helix-Turn-Helix DNA binding domain of the BmrR transcription regulator; Region: HTH_BmrR; cd01107" /db_xref="CDD:133382" misc_feature order(2797853..2797861,2797901..2797903,2797955..2797963) /locus_tag="lmo2722" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133382" misc_feature 2797964..2797966 /locus_tag="lmo2722" /note="drug binding residues [chemical binding]; other site" /db_xref="CDD:133382" misc_feature order(2797997..2797999,2798006..2798008,2798018..2798023, 2798048..2798050,2798087..2798089,2798099..2798101, 2798117..2798119,2798129..2798131,2798138..2798143) /locus_tag="lmo2722" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:133382" regulatory 2798612..2798617 /regulatory_class="ribosome_binding_site" gene 2798626..2799087 /locus_tag="lmo2723" /db_xref="GeneID:984820" CDS 2798626..2799087 /locus_tag="lmo2723" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466245.1" /db_xref="GeneID:984820" /translation="MEIKQIKAKDTQDIRHRVLRPEQPEENAIYPNDDMEGTFHLGAF EKDVLLGVASFYPEKSTVIMNPAQYRIRGVATERRMRLKGLGTALLAEGEAEIWTRGA DIIWCNARIVAVGFYEKHGYRKVGKSFVIPGIGEHYLMKKVNPNKKVDQDN" misc_feature 2798653..2799051 /locus_tag="lmo2723" /note="Predicted N-acyltransferase, GNAT family [General function prediction only]; Region: ElaA; COG2153" /db_xref="CDD:441756" regulatory complement(2799059..2799099) /regulatory_class="terminator" regulatory 2799072..2799109 /regulatory_class="terminator" gene complement(2799108..2799551) /locus_tag="lmo2724" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984922" CDS complement(2799108..2799551) /locus_tag="lmo2724" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466246.1" /db_xref="GeneID:984922" /translation="MAKMYPYLAFENAKEALGYYEEVFGATNISRLPVSEEQSEMFGL PKENLENTTVHGGFTVLGANLFCSDSFGKEVKPSNQISIMLDSNSEDPAAVADADAFF EKVSSSGRVTVTLPFEEQFWGGKMGQFVDEYGISWMIHTQPYSKL" misc_feature complement(2799132..2799542) /locus_tag="lmo2724" /note="Escherichia coli PhnB and similar proteins; Region: PhnB_like; cd06588" /db_xref="CDD:319899" misc_feature complement(order(2799138..2799140,2799168..2799170, 2799276..2799278,2799288..2799290,2799294..2799311, 2799354..2799356,2799363..2799368,2799480..2799482, 2799525..2799542)) /locus_tag="lmo2724" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:319899" regulatory complement(2799559..2799564) /regulatory_class="ribosome_binding_site" gene complement(2799609..2800961) /locus_tag="lmo2725" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986997" CDS complement(2799609..2800961) /locus_tag="lmo2725" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466247.1" /db_xref="GeneID:986997" /translation="MKEQSKRLGEDSIPSLMARLSIPAFIGMFVMGMYNIVDTIFVSY GVGPSGVAALSIAFPVQMILMAMAAMFGIGGASIISRSLGAGEQKHADKVFHQVIWLV LISSIFIAIVTFIFLDPLITLFGAPADIHDIASDFLSLILLGAVFQTFAMAMNNIVRS EGNAKTAMLTMIISAILNMILNPIFIMGFGMGVRGSALATVIAQAVGAIWLLIYFLSG KSTLSLKGFSFRMDFPLIRRIMAIGFPSFIMMSAGSIVTVAVNWMLNIYGGTMAIAVY GIANRIASFVIMPINGVTQGMQPIVGFNYGSRQFERVMKAVKVSMIAATVMSLIAWGL VEIFPGLLVRIFSNDPELIAQGTTAVRFMLLAAPTIGFQIVCGGLYQALGRARISFII SLMRQIICLVPLLLILPHFFGLDGIWYAFPLADLGAFAVCLVIMSKTWRRIFKNPEIV " misc_feature complement(2799654..2800928) /locus_tag="lmo2725" /note="Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA; Region: MATE_MepA_like; cd13143" /db_xref="CDD:240548" gene complement(2800958..2801407) /locus_tag="lmo2726" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987090" CDS complement(2800958..2801407) /locus_tag="lmo2726" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="NP_466248.1" /db_xref="GeneID:987090" /translation="MADRQESLAKAIAIIHRSESTFKNKKLLETGLNIGQLRYLWTLY KEDGISQESMAKRFMVDKASVTRHIKRLEELGMIRREIDAKDRRIQRIFVTETGFQMR DLIEEVTAEWSALLTANFSEKEKDDLMHLIGRLSDNAIIAVEGGESE" misc_feature complement(2800994..2801401) /locus_tag="lmo2726" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" regulatory complement(2800971..2800976) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2726" regulatory complement(2801415..2801420) /regulatory_class="ribosome_binding_site" regulatory 2801561..2801566 /regulatory_class="ribosome_binding_site" gene 2801577..2802458 /locus_tag="lmo2727" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987088" CDS 2801577..2802458 /locus_tag="lmo2727" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466249.1" /db_xref="GeneID:987088" /translation="MHIKILKNRYPNIVVSKNPIKSSSDTISFFEEPYYFTIPKSNLS EEEAMLLHTLFPEPLPTFPKESTQFWFDLLFGNKELAMTNEKETYRITQFHIKTTTTK SMLQEWQKALLSFFSPEAELIMFSTNYGVIIEKSTGSLLGEEELIAVAGTLENDFYIQ STFFMGLFHPLNDRLRGLFAEERAIFNHNNREVVQTVASESLKVIALRMKESLITNEL NDLFHQDDTWIPLIHTLFKNQGNISLTAKELFMHRNTIQYRLDKFYEQTNLSLRKMDG LLLAYLSTLQTNNSNHE" misc_feature <2802204..2802431 /locus_tag="lmo2727" /note="Sugar diacid utilization regulator CdaR [Transcription, Signal transduction mechanisms]; Region: CdaR; COG3835" /db_xref="CDD:443046" regulatory 2802531..2802536 /regulatory_class="ribosome_binding_site" gene 2802543..2802998 /locus_tag="lmo2728" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987087" CDS 2802543..2802998 /locus_tag="lmo2728" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="NP_466250.1" /db_xref="GeneID:987087" /translation="MTKNNISFYVVDASEELTMNIKEASEKSGVSADTIRYYERIGLI PPIHRNENGVRKFGAEDLRWILFTRQMRRAGLSIEALIDYLALFREGEHTLEARAELL KKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERSNS" misc_feature 2802597..2802935 /locus_tag="lmo2728" /note="Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB; Region: HTH_YyaN; cd01109" /db_xref="CDD:133384" misc_feature order(2802600..2802608,2802648..2802650,2802699..2802707) /locus_tag="lmo2728" /note="DNA binding residues [nucleotide binding]" /db_xref="CDD:133384" misc_feature order(2802741..2802743,2802750..2802752,2802762..2802767, 2802792..2802794,2802846..2802848,2802858..2802860, 2802876..2802878,2802888..2802890,2802897..2802902) /locus_tag="lmo2728" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:133384" regulatory 2802984..2802989 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2728" gene 2802998..2803402 /locus_tag="lmo2729" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987085" CDS 2802998..2803402 /locus_tag="lmo2729" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466251.1" /db_xref="GeneID:987085" /translation="MTTLENSVIFDKGELITNDYFIGNTYLKMLVPEDTVYNCPIGNV TFEPGARNNWHKHDGGQILLVTGGTGYYQEEGKSAQLLKEGDVVTIPKDVKHWHGATK DSWFVHLAISTNVELGGTTWLEPVSDEHYNNL" misc_feature 2803058..2803375 /locus_tag="lmo2729" /note="Granulicella tundricola hydroxynitrile lyase (GtHNL) and related proteins, cupin domain; Region: cupin_HNL-like; cd02233" /db_xref="CDD:380361" misc_feature order(2803085..2803090,2803181..2803183,2803187..2803189, 2803250..2803252,2803256..2803258,2803262..2803267, 2803322..2803324,2803328..2803330,2803334..2803336) /locus_tag="lmo2729" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:380361" regulatory complement(2803399..2803438) /regulatory_class="terminator" regulatory 2803410..2803449 /regulatory_class="terminator" gene complement(2803445..2804056) /locus_tag="lmo2730" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987083" CDS complement(2803445..2804056) /locus_tag="lmo2730" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphatase" /protein_id="NP_466252.1" /db_xref="GeneID:987083" /translation="MYKAIIFDVDGTILDTERAVLHSLQAVLAEEGLSYELDELRFVL GITGAAAVEQLNILDQEKVLGKWIEREATFIEEVEVFEGIHKVLHAIPESGVVTSKNA LEMEKGFYPFNIQDHFQAIVCASDTENHKPHPDPLLKGLEILGREPHEVLYVGDSSYD MKCAHAAGAHFGLALWGAKTTDGFEKAELVFEKPEDILAYVSK" misc_feature complement(2803535..2804044) /locus_tag="lmo2730" /note="Haloacid dehalogenase-like hydrolase; Region: HAD_2; pfam13419" /db_xref="CDD:404323" regulatory complement(2804064..2804069) /regulatory_class="ribosome_binding_site" gene complement(2804070..2804438) /locus_tag="lmo2731" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987082" CDS complement(2804070..2804438) /locus_tag="lmo2731" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="RpiR family transcriptional regulator" /protein_id="NP_466253.1" /db_xref="GeneID:987082" /translation="MKLDGVCKINSALGMEYQFGEFYIDRDYLVFDQDFSLGMKKRQT FPVAKLGHMALVREEEEIMLTFSCDNIEFEINGNSHDNLREFRDLLQNKGTDSSAIQK AENKKKARYTTHHYHNFAKS" regulatory complement(2804447..2804452) /regulatory_class="ribosome_binding_site" gene complement(2804522..2805274) /locus_tag="lmo2732" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987080" CDS complement(2804522..2805274) /locus_tag="lmo2732" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2732" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466254.1" /db_xref="GeneID:987080" /translation="MSATSLYRLFAPQIEFLSPAEKQVFFYIDNHISIIEKMSLTSLA ESTNVSTTTVIRMCHKLKLSGFSELKFLLHSDKTETKPLSKDYSSTFLEKIRLGIEQL PKKEIEQVATRIAYAPKIYIACLGMTKTLGEYFSKSLVTSKKNVVFTYDSFIIDILPQ IVERDDLIIIISESGGTENTLSLAEHLKYNLSNVIAIVNNPNAQISQYVETIIYASSE EFGEDSFKHHHAPLLIVIDLILNIFEQQKKLI" misc_feature complement(2804531..2805274) /locus_tag="lmo2732" /note="DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains [Transcription]; Region: RpiR; COG1737" /db_xref="CDD:441343" regulatory complement(2805283..2805288) /regulatory_class="ribosome_binding_site" regulatory 2805426..2805431 /regulatory_class="ribosome_binding_site" gene 2805440..2807398 /locus_tag="lmo2733" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987079" CDS 2805440..2807398 /locus_tag="lmo2733" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit IIABC" /protein_id="NP_466255.1" /db_xref="GeneID:987079" /translation="MKLSDITSEPLIFLDKDWRTKEEVFDGLIDALHNQGVLSDKNEF KKAVLEREKISETGLEKGFAIPHGKSKAVKKAAFAFARINQPINSWGSIDPTNEVKYI FLLAIPENEAGSTHLELLAALSKRLLDPAFIESISTAPTVNEFMTVLDSEQQEDEKVD YTRKIVAITACAAGIAHTYMAAEALELAGKELGIEVIVEKQGANGIEDRITPEILKGA EAVIFATDITAKDKERFAGMPFIQRRVAEPLRSGKEMIETVLSKPDGYVKADTDGSEQ QFDNNKSSIFSQIYRGILTGISYMLPVIVAGGLMIGIGQLGATAFGLEKVIGNPEYAT NSNQLIVIFHYLGLYGNMIMKFMYPVFGAFLAYSIADRPGLAPGFIGGAFAAGLHYTF WGVDGGIPSGFFGVLILGIIAGFVAKFLNEKIKLHKNLQAMKPMFLIPGITVLVLFFV NYYVVDPVFGGLNAWLQELIIQNQDASAVLLSTIIACLTAFDLGGPVNKAAGAIAIGL AADGIFPLTARVLAIVIPPIGLGLATVLDKYVVKRRVFDENLRVAGTTSIFLGFIAIG EGAIPFMLQNPLITIPINMIGASLGAVTAVLLGAVQWLPLPAIWGWPLVENFWAYAIG LIVGIAFITFANIFVRYGLITRKENKIK" misc_feature 2805440..2807245 /locus_tag="lmo2733" /note="PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional; Region: PRK09765" /db_xref="CDD:182066" regulatory 2807445..2807450 /regulatory_class="ribosome_binding_site" gene 2807459..2810107 /locus_tag="lmo2734" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987078" CDS 2807459..2810107 /locus_tag="lmo2734" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar hydrolase" /protein_id="NP_466256.1" /db_xref="GeneID:987078" /translation="MKKNKIVHVVAHSHWDHEWYFTMEDSNILLIENLDYLLNVLETK DSFASYSFDGQMSVIERYLDIRPENKARVQKLIQDRRLFVGPWYTQTDSLLVKTEAVI RNLLYGYKMGEEFGHSMSIGYSPDIFGQHAYLPAIYKSFNMEHSIFQRGVYNDQVQED LNFHWTSPDNKSIPTNNIFFGYGPGKFLSSEKSYVETRLLPILDRLAEMNTHTDVLLL PAGGDQVLVRENFPEIVAELNEMDLGYTFILSDYEAFMNDAWTSTFPNEITGELLACQ KSRIHHTCRSERYDIKRLNYLVENRLVNILEPLATMANKFGIKYPKPWLDIIWKKLFD SHAHNGIGASNSDDANHDIVVRLTSALRMTDGLINLLKKQITKAVSQEMGDENIALLF NTNPVPEERTAKLTLFTPEKSFQLFSGDKEVTFSVVHQEKLDGGRKVIVTAKGEKEVA VPDYYRTEIYLKTGPIPALGYTTLQVKAVAKEMDQLISISKQTIENEKIIVQFENGKI NLLNKEQQSIINDLIRFENVADAGDSFDFSPLEGDQAIYIESSELLTVEKNHLYSKMM LKHTALVPKDLEARAQKTSTETVEILTEIELFDGEEFVRVRHTIDNKVKDHRIRALIK TNVAEPKFSYADQGYSLMKRSVTNPYLANWREDKFVEAPVPIFPVENIVAVSEEDATL ALLVGGIKEYEILPKTAEIALTLFRSNGLLGKDDLMWRPGRASGINNKVVPTPDGQML EEMIFEYAVYVQPEKLNEQTLYAQSNIFEGHTETYHLQNLNTFEERLERFEVDYPIDR LPAQNSIFELDNPNVFMSTCKKSWDGTGTIIRLFNPSDKEETVRWTTNASSFEVSLAE EKIAELKENTICIPKKGFATILLEGE" misc_feature 2807459..2810050 /locus_tag="lmo2734" /note="mannosylglycerate hydrolase; Region: PRK09819" /db_xref="CDD:182093" regulatory 2810095..2810100 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2734" gene 2810109..2811791 /locus_tag="lmo2735" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987075" CDS 2810109..2811791 /locus_tag="lmo2735" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sucrose phosphorylase" /protein_id="NP_466257.1" /db_xref="GeneID:987075" /translation="MQTELVNQIEVKLRKIYQAAYQPAYLEKMLACAENYSNNTRGSI DTISEKNVYLIAYGDSIFEKNKHPLQTLNEFLQEYAQDAITDVHLLPIFPSTSDDGFS VTDYKQIDEQLGDWDDVQKMSENFRVMLDFVANHMSKSSDWFKRFSDNEAPYNQFFIE KDSQFDYKNVTRPRTSPLFHKYENGKELWTTFSEDQLDLNVRNIDCLVALTDVLLFYA SKQATSIRLDAIGFLWKTSGTTCMHLPETHEIISLWRLLIDELYPNLQIITETNVPHE ENISYFGDGKNEANMVYQFPLPPLVLHTFTCHDTTKLSKWAKSISQVSDTATYFNFLA SHDGIGMRPATGILSDEEINSLVQKAVQNGGQVSYKDNADGTQSVYELNINYGEALQN LDEDTTEELVTKKIIAAHSILLTLQGVPAIYYHSLLGSKNDLVGYEESGINRRINREK LEKNQLVHELKTDTYRKTIFTSLKKLVQIRRNHTAFSPFATQEILDLGPDVFAIKRES EGECIYGIINVTSHDISKKVAFSGTNLLANQPVTSELELTAYEVVWIKKAVQ" misc_feature 2810247..2811614 /locus_tag="lmo2735" /note="Alpha amylase catalytic domain found in sucrose phosphorylase-like proteins (also called sucrose glucosyltransferase, disaccharide glucosyltransferase, and sucrose-phosphate alpha-D glucosyltransferase); Region: AmyAc_Sucrose_phosphorylase-like_1; cd11356" /db_xref="CDD:200493" misc_feature order(2810400..2810402,2810409..2810411,2810514..2810516, 2810682..2810684,2810694..2810696,2810784..2810786, 2810790..2810795,2810802..2810804,2810916..2810918, 2810922..2810924,2811114..2811119,2811237..2811242, 2811249..2811251,2811438..2811440) /locus_tag="lmo2735" /note="active site" /db_xref="CDD:200493" misc_feature order(2810571..2810573,2810589..2810594,2810598..2810600, 2810607..2810612,2810631..2810636,2810646..2810651, 2810661..2810669,2811420..2811422,2811429..2811431) /locus_tag="lmo2735" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:200493" misc_feature order(2810790..2810792,2810916..2810918,2811117..2811119) /locus_tag="lmo2735" /note="catalytic site [active]" /db_xref="CDD:200493" regulatory 2811775..2811780 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2735" gene 2811788..2812921 /locus_tag="lmo2736" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987073" CDS 2811788..2812921 /locus_tag="lmo2736" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466258.1" /db_xref="GeneID:987073" /translation="MKIVIAPDSFKESATAVEVATAIKKGWTKARPADQISLAPVSDG GEGFLTVLSESSEVELFQAEVTNLNGHKIMASYGIHARQETAIIESANTIGLDLIPAA DRNPAHASSAGVGELILASLDHNVKKIIIGLGGSGTNDGGAGLIQALGVALLDKNKQP IPPGGIHLQELAYIDASNLNPKLKNIQFQIACDVTNPLLGENGATFVFGAQKGASPDM LVKLENAMQNYGAKLDQFSSQKITTKKGAGAAGGIAAGLMTFLNADLLSGSTLVMELS NMKDKMKDADIVIVGEGRMDKQSMMGKIPVQIAQEAKKQGCFVLAIVGSLALENNLAQ QHGIDAFFPNIPEITDLPTLFENTTKNLERTAENIAKLTLIGK" misc_feature 2811791..2812915 /locus_tag="lmo2736" /note="glycerate kinase; Region: TIGR00045" /db_xref="CDD:272872" regulatory 2811798..2811838 /regulatory_class="terminator" /locus_tag="lmo2736" gene complement(2812925..2813881) /locus_tag="lmo2737" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987071" CDS complement(2812925..2813881) /locus_tag="lmo2737" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="NP_466259.1" /db_xref="GeneID:987071" /translation="MPNIKEIAKLAGVSVTTVSRVLNNHPYVAEEKRVRVQAVIDELD YSPNRSAMDLARGKTNTVGVIIPYNDHPWFDKIVNGILEVAFKNRYSVTLFPTGYDPK EEEKYLMRLKTKQVDGLIITSRANNWDVILPYLAYGPIIACEYVESKEVSCSYIDRVK AYRAGFQFLEDEGYKKVAFTAGRASRESTSTYGKINAYEQVFGPVGDNRFLSECYTLE DGLKAGEHFFAAGKDWPDAIYANGDEVAAGVMYHVKKLGLRVPEDVAILGQENLPIGK VLEITTLDHNLKKLGENAFTIFEQGKLQRIKVEHELIRRKTV" misc_feature complement(2813669..2813878) /locus_tag="lmo2737" /note="helix_turn _helix lactose operon repressor; Region: HTH_LACI; smart00354" /db_xref="CDD:197675" misc_feature complement(order(2813717..2813722,2813726..2813731, 2813738..2813740,2813747..2813749,2813786..2813788, 2813795..2813800,2813813..2813815,2813822..2813827, 2813831..2813845,2813867..2813869)) /locus_tag="lmo2737" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143331" misc_feature complement(2813720..2813749) /locus_tag="lmo2737" /note="domain linker motif [active]" /db_xref="CDD:143331" misc_feature complement(2812937..2813701) /locus_tag="lmo2737" /note="ligand-binding domain of a novel transcription factor implicated in catabolite repression in Bacillus and Clostridium species; Region: PBP1_CcpB-like; cd06286" /db_xref="CDD:380509" misc_feature complement(order(2813117..2813122,2813129..2813131, 2813141..2813143,2813228..2813230,2813537..2813545, 2813552..2813554,2813561..2813563,2813594..2813596, 2813600..2813614,2813633..2813638,2813642..2813647, 2813654..2813662,2813699..2813701)) /locus_tag="lmo2737" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:380509" misc_feature complement(order(2813027..2813029,2813066..2813068, 2813072..2813077,2813159..2813161,2813237..2813239, 2813300..2813302,2813336..2813338,2813450..2813452, 2813513..2813515,2813660..2813662)) /locus_tag="lmo2737" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:380509" regulatory complement(2813890..2813895) /regulatory_class="ribosome_binding_site" regulatory complement(2813898..2813934) /regulatory_class="terminator" gene complement(2813949..2815283) /locus_tag="lmo2738" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987070" CDS complement(2813949..2815283) /locus_tag="lmo2738" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hemolysin" /protein_id="NP_466260.1" /db_xref="GeneID:987070" /translation="MNPDPESQQIILQLILIVVLTMLNAFFASAEMALVSLNKNRVKS QAETGDKKAVMLAKLVDDPSKFLATIQVGITLAGFFSSASAATSIATRLESVFGGSSF AKELSIIVVTIVLSYITLVFGELYPKRLALQKSEKIARVSVRPIMAVGVVLRPFVKFL SFSTDILVKLTRMEKNTDNEKMTREEMQLLIETGRRDGVIEVEELQMLRGVFEMDNKY AREVMVPRTDAFMIDAETESEELCDALLSENFSRVPVYTGDQDSVRGILHMKDFFAEA RKSGFENIDVKGLVKDAYFAQETMFIDDLLKNMQRTRNQMAILMDEYGGVAGIVTVED LLEEIVGEIDDENDVFSDEVKKVDETTFIVEGRMPLDDFNKMFHVELPSRGVDTVAGF VLTLTGTIPEEDDKVVVEYGTLRFTVEEMNDARLVSVRVEKDIQTSELGQMA" misc_feature complement(2813985..2815223) /locus_tag="lmo2738" /note="Hemolysin-related protein, contains CBS domains, UPF0053 family [General function prediction only]; Region: TlyC; COG1253" /db_xref="CDD:440865" regulatory complement(2815291..2815296) /regulatory_class="ribosome_binding_site" gene complement(2815401..2816090) /locus_tag="lmo2739" /db_xref="GeneID:987067" CDS complement(2815401..2816090) /locus_tag="lmo2739" /experiment="EXISTENCE:[PMID:19448609]" /note="Modulates the activities of several enzymes which are inactive in their acetylated form" /codon_start=1 /transl_table=11 /product="NAD-dependent deacetylase" /protein_id="NP_466261.1" /db_xref="GeneID:987067" /translation="MNKLNEALKKAERIVFLTGAGVSVPSGIPDYRSKNGLYAGMSSP EYMLSHTCLVREPEKFYQFVTENMYYPNAVPNVIHKKMAEIETEKDVTIITQNIDGLH EKAGSKKVVNFHGSLYHCYCQNCGMTVTAKDYLKSDIHTDCGGVIRPDVVLYEEAISE SAIDQSLTAIRKADLIVIVGTSFRVSPFCNLTDYRNKKARIFAVNKERISLPYPFEMM ESDAVKVFEEI" misc_feature complement(2815413..2816081) /locus_tag="lmo2739" /note="Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone...; Region: SIR2H; cd01411" /db_xref="CDD:238702" misc_feature complement(order(2815428..2815430,2815470..2815475, 2815536..2815538,2815551..2815553,2815749..2815751, 2815794..2815796,2815800..2815805,2815854..2815856, 2815995..2816000,2816019..2816024,2816028..2816030)) /locus_tag="lmo2739" /note="NAD+ binding site [chemical binding]; other site" /db_xref="CDD:238702" misc_feature complement(order(2815533..2815541,2815617..2815631, 2815635..2815637,2815749..2815751,2815797..2815799)) /locus_tag="lmo2739" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:238702" misc_feature complement(order(2815662..2815664,2815671..2815673, 2815716..2815718,2815725..2815727)) /locus_tag="lmo2739" /note="putative Zn binding site [ion binding]; other site" /db_xref="CDD:238702" gene complement(2816083..2816373) /locus_tag="lmo2740" /db_xref="GeneID:985142" CDS complement(2816083..2816373) /locus_tag="lmo2740" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2740" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466262.1" /db_xref="GeneID:985142" /translation="MPTNLIQLPGIGKKMVLMLNEIGIEEVADLRGRNPLELYEDTCD KRGERMDPCVLYTYRCAVYVAETDEAEQDVDLRKWWNWKDKQHTNERNLKNE" misc_feature complement(2816122..2816367) /locus_tag="lmo2740" /note="Pathogenicity locus; Region: Cdd1; pfam11731" /db_xref="CDD:463333" regulatory complement(2816101..2816106) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2740" gene complement(2816363..2817571) /locus_tag="lmo2741" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987061" CDS complement(2816363..2817571) /locus_tag="lmo2741" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="multidrug transporter" /protein_id="NP_466263.1" /db_xref="GeneID:987061" /translation="MENWKKNLYVVWVGCFLTGTGLNLIMPFLPLYIEELGVHNPDQV SMWSGIALSSTFLVSAIMSPIWGKLADQKGRRIMLLRAALGMAIAMILMGLVSNVYQF VGLRLLMGIFSGYISTANALIATQVPRHRSGWALGALSTAAVSGVLIGPLIGGALSDT FGVRPVFYITGVLLLGSFFLTLFFVKEKFTPVEKKEMRSGKEVFLSLKNPGLIISLFI TTMMIQIASNSVNPILTLYVRDLAGNAQNIAFISGMIASVPGVAALIAAPRLGRWGDR IGSERILLGALIGSMLLQIPMAFAQNPLQLGILRFLLGLTDGALLPAVQSLLTKNTPR EVAGRIFGYNQSFQYIGNVIGPLVGSSVAAHFGYGDVFLVVAGFIFINVLISFYFNRK MHGEKGNHAN" misc_feature complement(2816405..2817541) /locus_tag="lmo2741" /note="Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_MdtG_MDR_like; cd17391" /db_xref="CDD:340949" misc_feature complement(order(2816516..2816518,2816525..2816530, 2816537..2816542,2816549..2816551,2816597..2816599, 2816609..2816611,2816621..2816626,2816771..2816773, 2816783..2816785,2816876..2816878,2816885..2816893, 2816900..2816905,2816912..2816914,2817131..2817133, 2817140..2817145,2817152..2817154,2817209..2817211, 2817218..2817226,2817230..2817235,2817383..2817385, 2817494..2817496,2817503..2817508,2817515..2817520)) /locus_tag="lmo2741" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340949" regulatory complement(2816380..2816385) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2741" regulatory complement(2817576..2817581) /regulatory_class="ribosome_binding_site" regulatory complement(2817615..2817652) /regulatory_class="terminator" gene complement(2817688..2818035) /locus_tag="lmo2742" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987057" CDS complement(2817688..2818035) /locus_tag="lmo2742" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2742" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466264.1" /db_xref="GeneID:987057" /translation="MNQTFIVKKEHISQYPNPLFVNKNESIWVFEEDTEYPGWIFCKV KSSGKEGWIPKQIIQISNDGKSGTVSEDYSARELNVKPGDKLESNRELNGWVWCVTEE NEAGWVPRENLEV" regulatory complement(2818045..2818050) /regulatory_class="ribosome_binding_site" gene complement(2818054..2818698) /locus_tag="lmo2743" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987056" CDS complement(2818054..2818698) /locus_tag="lmo2743" /EC_number="2.2.1.2" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="translaldolase" /protein_id="NP_466265.1" /db_xref="GeneID:987056" /translation="MRFFIDTANVEEIKKANRMGFISGVTTNPSLVAKEGRDFNEVIQ EITSIVDGPISGEVVSLEADEMIAEGRVIAKIHPNMVVKIPMTGEGLAAVKVLTEEGI KTNVTLVFSATQALLAARAGATYVSPFLGRLDDIGDDGLVLIRDIADIFEIHGIPTEI ISASVRHPIHVIECAKAGADIATVPFKVFEQMLKHPLTDSGIDKFLADWEAAKK" misc_feature complement(2818066..2818692) /locus_tag="lmo2743" /note="Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea; Region: Transaldolase_FSA; cd00956" /db_xref="CDD:188643" misc_feature complement(order(2818210..2818212,2818312..2818314, 2818450..2818452,2818615..2818620,2818681..2818683)) /locus_tag="lmo2743" /note="active site" /db_xref="CDD:188643" misc_feature complement(order(2818072..2818077,2818081..2818086, 2818096..2818098,2818105..2818110,2818114..2818116, 2818162..2818164,2818171..2818176,2818192..2818194, 2818198..2818200,2818237..2818242,2818291..2818293, 2818297..2818299,2818306..2818308,2818312..2818314, 2818357..2818359,2818414..2818416,2818423..2818428, 2818432..2818434,2818492..2818494,2818510..2818512, 2818528..2818530,2818582..2818584,2818591..2818593, 2818600..2818602,2818609..2818614,2818639..2818641, 2818648..2818650)) /locus_tag="lmo2743" /note="intersubunit interactions [active]" /db_xref="CDD:188643" misc_feature complement(2818450..2818452) /locus_tag="lmo2743" /note="catalytic residue [active]" /db_xref="CDD:188643" regulatory complement(2818707..2818712) /regulatory_class="ribosome_binding_site" regulatory complement(2818788..2818816) /regulatory_class="terminator" gene complement(2818841..2819530) /locus_tag="lmo2744" /db_xref="GeneID:984370" CDS complement(2818841..2819530) /locus_tag="lmo2744" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="Crp/Fnr family transcriptional regulator" /protein_id="NP_466266.1" /db_xref="GeneID:984370" /translation="MLFLKELESNLTVSKLMELCFEHPNYKDYCSVISTKKGEVLESL SPAGTKVYFVLSGIYGMIVEEDAEMEEESCKECIVRFLQKGDSFGLYHLFYDEWSPHV SMQSLGHGEVMEVDSNFLFSIFDKKDENNFFMIKVMAEELREAHTFAKLSFLKKEERI RKAILKCAQTLGTFSDNGILLPREITQEVLARYTNTSREYVAHTVMHLIKEDIIRNRP KPLLVMDKTRL" misc_feature complement(2818844..2819449) /locus_tag="lmo2744" /note="cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Region: Crp; COG0664" /db_xref="CDD:440428" regulatory complement(2819535..2819540) /regulatory_class="ribosome_binding_site" regulatory 2819845..2819850 /regulatory_class="ribosome_binding_site" gene 2819860..2821587 /locus_tag="lmo2745" /db_xref="GeneID:987054" CDS 2819860..2821587 /locus_tag="lmo2745" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_466267.1" /db_xref="GeneID:987054" /translation="MDQKKYSWRKFFQLLISAKPANWIIFCALFASVITTVAGLVVPL FTKNLIDGFSIASLDVKMIALIVLAFILQAITNGFSIFLLNYMGQKVVATIRERLWKK IVHLPVSYFDNTKTGEMVSRMVNDTVVVKELIADHLPQFVTGIISVVGAIIILFFMDW KMTLIILVAVPITALVVAPLGQKMFKISKGLQNETANFTGSISQTLSEARLVKASNAE TLETEAGHQGINRLFGFGIREAKVVAVLGPLIFFVVMGVIVGIIGYGGIRVSAGTMTT GTLIAFLLYLFQIIVPVTSFATFFAQLQKAKGATERIADILNETEEDFDAGKKVDVSG KTIRASDISFSYNEGEPILKHVSFDTKPGEVIAFAGPSGGGKSTLFAILERFYQPKTG EILVGDIPLSEISINSWRTQIGYVSQESAMLSGTIRDNLCYGLDREITEDELWNVAKL AYADGFISELPDKMATEVGERGVKLSGGQRQRIAIARAFLRNPNILMLDEATASLDSQ SEQIVQQALANLMEGRTTFVIAHRLSTIVNADQILFIEHGEITGRGTHSELVASHPLY ASFAEQQLK" misc_feature 2819869..2821584 /locus_tag="lmo2745" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:440747" regulatory complement(2821599..2821633) /regulatory_class="terminator" regulatory 2821610..2821646 /regulatory_class="terminator" gene complement(2821641..2821892) /locus_tag="lmo2746" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:987030" CDS complement(2821641..2821892) /locus_tag="lmo2746" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2746" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466268.1" /db_xref="GeneID:987030" /translation="MANLSELPNIGKVLEQDLIKAGIKTPAELKDVGSKEAFLRIWEN DSSVCLSELCALEGAVQGIRWHDLDEAKKSELKKFHQSL" misc_feature complement(2821656..2821886) /locus_tag="lmo2746" /note="TfoX C-terminal domain; Region: TfoX_C; pfam04994" /db_xref="CDD:461512" regulatory complement(2821900..2821905) /regulatory_class="ribosome_binding_site" gene complement(2821912..2823195) /gene="serS" /locus_tag="lmo2747" /db_xref="GeneID:987010" CDS complement(2821912..2823195) /gene="serS" /locus_tag="lmo2747" /EC_number="6.1.1.11" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA" /codon_start=1 /transl_table=11 /product="seryl-tRNA synthetase" /protein_id="NP_466269.1" /db_xref="GeneID:987010" /translation="MLDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVE TEALKSQRNEVSQEIAKLKREKQDADAKIEEMRVVGDRIKTLDIELREIDEKLDMILM SIPNIPHESTPVGESEDDNVEIRKWGEVRAFDFEPKAHWDLGTDLDILDFENAAKVTG SRFVFYKKLGARLERALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDA FLIEAEDYFLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLI RQHQFNKVELVQFVKPEDSYVALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKK YDLEVWIPSYNSYREISSCSNFESFQARRANIRFRREPGSKPEYVHTLNGSGLALGRT VAAILENYQDADGSVRIPKVLQGYMGGIEKIELPK" misc_feature complement(2821924..2823195) /gene="serS" /locus_tag="lmo2747" /note="Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: SerS; COG0172" /db_xref="CDD:439942" regulatory complement(2823203..2823208) /regulatory_class="ribosome_binding_site" gene 2823255..2823477 /locus_tag="lmos96" /db_xref="GeneID:18245174" misc_RNA 2823255..2823477 /locus_tag="lmos96" /product="T-box" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245174" gene complement(2823530..2823949) /locus_tag="lmo2748" /db_xref="GeneID:984689" CDS complement(2823530..2823949) /locus_tag="lmo2748" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466270.1" /db_xref="GeneID:984689" /translation="MRNELEDKILAILEQHQVGVLTSVQGDYPHARYMTFLHDGLTLY TPSGKELPKTDEVRRNPHVSVLIGYESPGSAFLEINGLASLEEDESIKERIWENISKE WFRGEDSPSFVVIKIVPEQIRILNSDDDGPDTLDLIG" misc_feature complement(2823569..2823949) /locus_tag="lmo2748" /note="General stress protein 26 (function unknown) [Function unknown]; Region: YzzA; COG3871" /db_xref="CDD:443080" regulatory complement(2823959..2823964) /regulatory_class="ribosome_binding_site" regulatory 2824066..2824071 /regulatory_class="ribosome_binding_site" gene 2824079..2824651 /locus_tag="lmo2749" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984910" CDS 2824079..2824651 /locus_tag="lmo2749" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="glutamine amidotransferase" /protein_id="NP_466271.1" /db_xref="GeneID:984910" /translation="MILIIDHNDSFTYNLYQYFLELQEEVQVVSATSFSLEAFQQLAP EMVVLSPGPGSPEDFPVSLALLGKIQVPILGICLGHQIIGHFFGAKVVPANVPVHGKT SVISHTGEGLFADLEPAFQVTRYHSLVIDPTTVPVNLKVTAVTEDGVIMGLVHATKPI HSVQFHPEAILSENGHAILKNFVRLGRNVK" misc_feature 2824082..2824642 /locus_tag="lmo2749" /note="Anthranilate/para-aminobenzoate synthase component II (glutamine amidotransferase) [Amino acid transport and metabolism, Coenzyme transport and metabolism]; Region: PabA; COG0512" /db_xref="CDD:440278" regulatory 2824633..2824638 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2749" gene 2824648..2826354 /locus_tag="lmo2750" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986907" CDS 2824648..2826354 /locus_tag="lmo2750" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="para-aminobenzoate synthase subunit I" /protein_id="NP_466272.1" /db_xref="GeneID:986907" /translation="MSLLRFDFEGDTKIFENPLYELVAYDLAEVLPIMKAAENAQKSG KYVAGFVSYEAAPAFRSNLKTKKPSESMPLVWFGVYDNFTDTATETPDSSPLSFKMDT SFPEYTEKIEQIKAEIAAGNTYQINYTVRLQSDVPNNFSSQATYETLQQIGKANYTAL LSTSDFEIISASPELFFKWKENLLTTRPMKGTIRRGITEQADLEAHDWLKNDPKNRAE NVMIVDLLRNDLGMIAVPGSVKVPQLMTLEPYPTVWQMTSTITAETPPETDLTAVFKA LFPCGSITGAPKARTMEIISELEDSPRGVYCGTIGFLEPNGNAIFNVPIRTIAITDNK ATYGVGGGIVWDSEAASEFSEIHAKSAILEKATKFSLIECLRIENGELFRTEYHLKRL QTSADFFGIPFNREETEKLWTKTAQKNTTGTYKMRFLLHPEGAHDLALTKIDTKNKRI TAQLADKPVLSNDLFLYHKTTHRKIYEDLKNTQTDETLLWNEQGELTEFINGNIVLGI NGCFFTPPVTSGLLSGTMRAELLAKNKISEKTLAKKDLLEADYVWLINSVRGFVEVEI KQ" misc_feature 2824786..2825736 /locus_tag="lmo2750" /note="chorismate binding enzyme; Region: Chorismate_bind; cl29920" /db_xref="CDD:453081" misc_feature 2825752..2826342 /locus_tag="lmo2750" /note="PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV). This D-amino acid superfamily, one of five classes of PLPDE, consists of branched-chain amino acid aminotransferases (BCAT), D-amino acid transferases (DAAT), and 4-amino-4-deoxychorismate...; Region: PLPDE_IV; cl00224" /db_xref="CDD:444764" misc_feature order(2825761..2825763,2825818..2825820,2826052..2826054, 2826139..2826141,2826220..2826225,2826316..2826318) /locus_tag="lmo2750" /note="substrate-cofactor binding pocket [active]" /db_xref="CDD:238254" misc_feature order(2825818..2825820,2826052..2826054,2826139..2826141) /locus_tag="lmo2750" /note="pyridoxal 5'-phosphate binding site [chemical binding]; other site" /db_xref="CDD:238254" misc_feature 2826052..2826054 /locus_tag="lmo2750" /note="catalytic residue [active]" /db_xref="CDD:238254" regulatory 2826503..2826508 /regulatory_class="ribosome_binding_site" gene 2826515..2828236 /locus_tag="lmo2751" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984683" CDS 2826515..2828236 /locus_tag="lmo2751" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_466273.1" /db_xref="GeneID:984683" /translation="MKVLFHHLKKYKLQATLSTLFVVVMVISQLWQPKLLQQVLDAIM KDDMDEISSIGALLIGIAAVGLIAGILNTILSAKVAQGVGADIRESSFRKIQTFSFSN IEKLSTGNLVVRQTNDITQVQNLVMLSLQSLTRIPIMFIGAFILAMFTLPELWWVIIV LVVLVVLIVVFTFGSMGKHFAIIQKLIDRVNSIAKENLAGMRVVKSFVQEDNEIGRFT TVSDKLTRHTIIVGTLFSVMIPAFMLVSNLAIVVSIFFVGDMAADNPEVIGAIASFMN YLMQIMMAIIIGGMLMMMASRALISLKRITEVLETEPDITYNENAPEQDLEGTVEFRN VSFKYDGDDTPALEDISFKASVGEMVGIVGATGSGKSTLAQLIPRLYDPTEGEVIIGG TNLKDINKKTLRSTVSFVLQRAILFSGTIADNLRHGKKDATAEEMEHASKIAQAKEFI DKQAKLYEAPVSERGNNFSGGQKQRLSITRGVIGSPKVLILDDSTSALDAKSEKLVKE ALNKELDDTTTFIIAQKISSVIQADKILVLDKGKLVGVGSHKELLKENETYREIYDTQ KGKEVTA" misc_feature 2826515..2828224 /locus_tag="lmo2751" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:440747" regulatory 2828220..2828225 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2751" gene 2828236..2830008 /locus_tag="lmo2752" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984457" CDS 2828236..2830008 /locus_tag="lmo2752" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_466274.1" /db_xref="GeneID:984457" /translation="MKEFKQISRFFWHYLRGYKPQLFVILIAVVFATYLQVKAPQYIG NAVQELGDYVVNLMQTGVDDKSDFIHIIWMLILCYVLLAAATFIQSIIMTGVAGKSTN RMRIGLFRKMEKLSIRFFDSRNDGEMLSRFTSDLDNISNTLNQALIQVLSNVALMIGV IIMMFQQNVELAFVTLISAPFAIIIATVIIRKARKFVDVQQDELGVLNGYIDEKISGQ KIIITNGLEEETIDGFVKQNNIVKNATYKGQVYSGLLFPMMQGISLLNTAIVIFFGGW LALNGDLERTAALGLIVMFVQYSQQFYMPLTQISSQYSLLQLAITGARRVSEVFAEEE EVERENLQTIDGINKGVKLDHVDFAYDPAKPVLKDVSIDVSKGKMVALVGPTGSGKTT VMNLLNRFYNVDGGAILFDDIDIRDIRLDSLRKQVGIVLQDSVLFTGTIRDNIVFGKP EASDDEVINAAKQANIHDFIMNLEKGYETEISDENNIFSVGQKQLMSIARTIITNPSL LILDEATSNVDTVTESRIQKAMDNVISGRTSFVIAHRLKTILDADHIVVLHQGEVIEQ GNHDELMKAEGFYSELYHNQFVIE" misc_feature 2828239..2829996 /locus_tag="lmo2752" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; Region: MdlB; COG1132" /db_xref="CDD:440747" regulatory 2830039..2830082 /regulatory_class="terminator" regulatory 2830267..2830272 /regulatory_class="ribosome_binding_site" gene 2830284..2830523 /locus_tag="lmo2753" /db_xref="GeneID:984463" CDS 2830284..2830523 /locus_tag="lmo2753" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2753" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466275.1" /db_xref="GeneID:984463" /translation="MNFNFFVRSGFIGLILLFVIQVLGIIRGLLIQSGFMDGSIDQTL LGTKLIIVPIIFFTISVIFFLLWFYKDYQKSRFPN" regulatory complement(2830507..2830532) /regulatory_class="terminator" regulatory 2830508..2830542 /regulatory_class="terminator" gene complement(2830542..2831879) /locus_tag="lmo2754" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986888" CDS complement(2830542..2831879) /locus_tag="lmo2754" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase" /protein_id="NP_466276.1" /db_xref="GeneID:986888" /translation="MKNIIKKTGILIMAASLAVSGFLVSPKAAQAAEAPNVNANAAIA IEESTGKILYSKDADKLMGIASMTKMMDEYLLLEAIDKGKLKWDDKVTISEYAYKVSQ DTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAIAISEKIAGSEKEFVDAMNKKADEL NLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTARGMAKLAKHLINDYPDVLKTAST TKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTGTTDYAGMCLTATAVQDGMRV ITVVLHANGGAPGEHTSARFDETNKMLDYAFNNFKVKEVQKAGSKVKNPSTIAVDKGK EDTVGLVTKDAVKLVVPKNGNAPKLNTKVTMKEKTIEAPVKKGTEVGKMEVSLKDGDK LGYVDGKQTETIDVLTASDVEKANWFMLSTQAVGSFFTGMGNYVSDGVKGWFN" misc_feature complement(2830629..2831849) /locus_tag="lmo2754" /note="streptococcal D-alanyl-D-alanine carboxypeptidase PBP3; Region: strep_PBP3; NF038273" /db_xref="CDD:468443" regulatory complement(2831887..2831892) /regulatory_class="ribosome_binding_site" gene complement(2832058..2833725) /locus_tag="lmo2755" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986886" CDS complement(2832058..2833725) /locus_tag="lmo2755" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="CoA-transferase" /protein_id="NP_466277.1" /db_xref="GeneID:986886" /translation="MKHNQLIIETDIPAKMRDGVTLYADIYRPADAGEYPVLLTRLPY SKSYGLHFIRPNILAEQGYVVIVQDVRGRYTSEGDFVPYIAEVDDGYDTIEWAANLPY ANGDVGMFGLSYYGYTQILAAISGNKHLKAIAPIMAQNSMTDVFNDHDGALELGMWET WNLESMLPNMLARTYKTHDELEEAANTLMKNLDNLDTLYQFKPYEDWPAIGQNEMPYF SELLNYEPTHDHWRKIDAKSNYDKINVPGLHVAGWYDCFLDKTIANFKNGHLRGLGDK LIIGPWTHANFTQMIGDRDFGMAATKWGEANMHARHIEWFNHWLKNEPLPASAPVNYF VMGLNDWKTAENWPPQNANMTPLYFKNEKVSAEFTPPATSSEAKFSYDPENPVPSNGG GTLHKALHADGPHDQQQIELREDVLCYSTEPLKEAIEVTGPIQVKLWAKTDAPNTDFT AKLVDVFPDGTAFNLADGIIRAAKQHGANVQNNINEYTIDLWATSNLFQKGHQIRIEI SSSNFPRFDPNPNTGDSFINSTESQIANQTIYHSPEYPSHILLPIIR" misc_feature complement(2832061..2833707) /locus_tag="lmo2755" /note="Predicted acyl esterase [General function prediction only]; Region: COG2936" /db_xref="CDD:442179" regulatory complement(2833734..2833739) /regulatory_class="ribosome_binding_site" regulatory complement(2833796..2833822) /regulatory_class="terminator" gene complement(2833834..2835987) /gene="topB" /locus_tag="lmo2756" /db_xref="GeneID:985520" CDS complement(2833834..2835987) /gene="topB" /locus_tag="lmo2756" /experiment="EXISTENCE:[PMID:19448609]" /note="decatenates replicating daughter chromosomes" /codon_start=1 /transl_table=11 /product="DNA topoisomerase III" /protein_id="NP_466278.1" /db_xref="GeneID:985520" /translation="MTKTLVLAEKPSVGKDIGRVLGAKQGKNGYLEGGKYVVTWALGH LVTLADPERYDSKYKNWNMEDLPMLPEKMKLEPIKQTRKQYETVKKLMNRTDITTIVI ATDAGREGELVARWIIDYAKIKKPLKRLWISSVTDKAIREGFEHLKPGKAYENLYHSA VARSEADWVVGINATRALTTKYNAQLSCGRVQTPTLAMIQHREEEIRNFKSREYYGIT ALTEQESFTWNNGQTFDKALAEKLVKSLQGENAVITDVSMKEKKTFSPGLYDLTELQR DANNRYDFSAKETLNIMQTLYERHKVLTYPRTDSRFISTDIVPTLKERLVACGVGENA KAARQISVKPIKANKSFVDNSKVSDHHAIIPTEQPVSLGDLSDKERKIYDLVVKRFLA VLSDPYIYEETSVKAKIGQEEFTLKGKVVKSLGWKSIYGESREPDQLTKMKKGDTIPV KRINLETGKTKPPARFDEATLLSAMENPSKYMETTNKALAKTLGETGGLGTVATRADI IEKLFNSFSLEKQGKDIQITSKGRQLLELVPEDLKSPELTARWEQKLSKIAKGELDYR KFTAEMRDYAKKAVTEIKQNDKKFRHDNITSQKCPDCGKPMLKVKGKRGTMLVCQDRE CGHRESVSRTTNARCPNCHKRMEMRGEGDKQIFVCVCGHREKLSAFQQRRDKQKNKNV SKTDVAKFMKKQNKQEDEPFNNPMAEALAKLKLDK" misc_feature complement(2834053..2835981) /gene="topB" /locus_tag="lmo2756" /note="DNA topoisomerase 3; Region: PRK07726" /db_xref="CDD:236078" misc_feature complement(2833990..2834091) /gene="topB" /locus_tag="lmo2756" /note="C-terminal zinc ribbon domain of RNA polymerase intrinsic transcript cleavage subunit; Region: Zn-ribbon; cl02609" /db_xref="CDD:445850" misc_feature complement(order(2834005..2834007,2834011..2834013, 2834062..2834064,2834071..2834073)) /gene="topB" /locus_tag="lmo2756" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:259791" regulatory complement(2835997..2836002) /regulatory_class="ribosome_binding_site" gene complement(2836011..2837783) /locus_tag="lmo2757" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986884" CDS complement(2836011..2837783) /locus_tag="lmo2757" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase" /protein_id="NP_466279.1" /db_xref="GeneID:986884" /translation="MIEQARAILQQNFGYQDFRNGQVDVISKLCAGEDTLAIMPTGGG KSLCYQIPALLFDGLTIVVSPLISLMKDQVDALVSEGIAATFINSTLTNREIDIRLDA AFSGELKMLYIAPERIETPGFQRLIEQVPISLFAIDEAHCISQWGHDFRPSYLTLCDS LDKMTRRPLVIALTATATQAVSDDICRLLKIRADSVVKTGFSRDNLAFQVVKGQDKDK YLIDYLTKNVTESGIIYASTRKEVERLHSFLQKKGVESGMYHGGMTDLARKDWQEKFL YDDIRVIVATNAFGMGINKSNVRFVIHYNIPRNIEAYYQEAGRAGRDGVPSDCILLFS PQDSRIQQFLIEQSEMDDERKQNEFAKLRQMTGYGYTEICLQKYIVQYFGDDEPNCGK CSNCLDTREATDITILAQQVFSCIKRMGERFGKVLIAKVLTGSADQKVKDWRFDELST YGLMKDASQKDVLQLIDYLTAEKYLQPTDSQFPSLKLTDRAVSVLRGELKVERKQAKR AEKVKIDVNSDLFEKLREVRRELAAKHKVPPYIIFSDETLREMCAYMPQTEDALLEVK GIGAMKRDKYGAEFLAVLQQEASK" misc_feature complement(2836029..2837771) /locus_tag="lmo2757" /note="ATP-dependent DNA helicase RecQ; Provisional; Region: PRK11057; cl47126" /db_xref="CDD:481466" regulatory complement(2837795..2837800) /regulatory_class="ribosome_binding_site" regulatory complement(2837904..2837933) /regulatory_class="terminator" gene complement(2837944..2839410) /gene="guaB" /locus_tag="lmo2758" /db_xref="GeneID:986870" CDS complement(2837944..2839410) /gene="guaB" /locus_tag="lmo2758" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="inosine-monophosphate dehydrogenase" /protein_id="NP_466280.1" /db_xref="GeneID:986870" /translation="MWETKFAKEGLTFDDVLLVPAKSDVLPNDVDLSVEMAPSLKLNV PIWSAGMDTITEAKMAIAIARQGGIGVVHKNMSIEQQAEEIEKVKRSESGVIIDPFYL TPDHQVFAAEHLMGKYRISGVPIVNNEKERKLVGILTNRDLRFISDYSTVIKDVMTKE NLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITIKDIEKVIEFPNSAKDKH GRLLAAAAVGITNDTFVRVEKLIEAGVDAIVIDTAHGHSAGVINKISEIRQTFKDVVI VAGNVATAEGARALFEVGVDIVKVGIGPGSICTTRVVAGVGVPQITAIYDCATVAREF GKTIIADGGIKYSGDIVKALAAGGNAVMLGSMLAGTDESPGETEIFQGRQFKTYRGMG SLAAMEHGSKDRYFQADAKKLVPEGIEGRVPYKGSVADIIFQLVGGIRSGMGYTGSPD LRHLREEAAFVRMTGAGLRESHPHDIQITKEAPNYSIS" misc_feature complement(2837989..2839383) /gene="guaB" /locus_tag="lmo2758" /note="IMP dehydrogenase / GMP reductase domain; Region: IMPDH; pfam00478" /db_xref="CDD:459826" regulatory complement(2839422..2839427) /regulatory_class="ribosome_binding_site" gene complement(2839698..2840228) /locus_tag="lmo2759" /db_xref="GeneID:986677" CDS complement(2839698..2840228) /locus_tag="lmo2759" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466281.1" /db_xref="GeneID:986677" /translation="MEITIVKGDITEQEVDVIVNAANSGLLGGGGVDGAIHQAAGPDL LKECQEVINRIGSCPAGEAVITSAGDLKATYIIHAVGPIWKDGEHQEANKLASCYWKA LDLAAGKDLTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEEEYDTSIKEIRFVCFD EENLKLYNKLINSEVV" misc_feature complement(2839701..2840228) /locus_tag="lmo2759" /note="ADP-ribose-binding protein; Region: PRK00431" /db_xref="CDD:234759" misc_feature complement(order(2839740..2839742,2839749..2839754, 2839758..2839760,2839857..2839880,2839980..2839982, 2839986..2839988,2840115..2840117,2840124..2840126, 2840130..2840147,2840160..2840168,2840199..2840207)) /locus_tag="lmo2759" /note="active site" /db_xref="CDD:438955" regulatory complement(2840236..2840241) /regulatory_class="ribosome_binding_site" gene complement(2840286..2841896) /locus_tag="lmo2760" /db_xref="GeneID:986274" CDS complement(2840286..2841896) /locus_tag="lmo2760" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_466282.1" /db_xref="GeneID:986274" /translation="MTIVAMNEVVKSFTGDIILEKVSLQLEEGERVGLIGRNGEGKST ILKILKGTEGVDSGIVTSKKGARIGLLEQLSSVDPNIIVEHYLRTSFGELEDMEKELR SLEAEMATNASEKLMNRYGDKMALFGELGGYEMDANLNKVVNGLGIGKLLSQSWGDLS GGEKTKTALAHLLLQKTDLLLLDEPTNHLDLMAVEWLTAFLQHYSGTVLVVSHDRYFL DEVVEKMVELENRELIVYHTNFSGYLKEREERLLREFQDYKDQQKKIKKMQQAIKRLR QWAMQANPPNDAMFRRAKNMERALERMEKVKRPVLTQKQMQLQFDEAGRSGQEVVVME NLSKSFSEKTIVQEVSLQIRQGERVAIIGENGAGKSTLLKIMEGKVVPDDGVIKVGAS VKIASLSQQMEELNEEMTVLDAFRDKVAVTEGEARQMLAGFMFYGEMVFRKVRNISGG ERMRLRLAQFINMPVNTLILDEPTNHLDIASREVLEEAIRAFSGTIITVSHDRYFIDQ LCSKVIWLENKQLTVYEGNYSYATSKRR" misc_feature complement(2840307..2841881) /locus_tag="lmo2760" /note="ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]; Region: Uup; COG0488" /db_xref="CDD:440254" regulatory complement(2841902..2841907) /regulatory_class="ribosome_binding_site" gene 2841962..2842200 /locus_tag="lmos97" /db_xref="GeneID:18245179" misc_RNA 2841962..2842200 /locus_tag="lmos97" /product="rliI" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:18245179" gene 2842035..2842385 /locus_tag="lmo2760a" /db_xref="GeneID:16695808" CDS 2842035..2842385 /locus_tag="lmo2760a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475646.1" /db_xref="GeneID:16695808" /translation="MTPCFSHFFSLYSFLGRLRQCNCNTGKNCTDNIQKFSYTSSRIQ KKHVISPLFINTYRIKDAAPNVNCSPNHMHETQRFNSETYTIDVKHEPKAPKSIYQLV ETVYINKASKTKTD" regulatory 2842400..2842405 /regulatory_class="ribosome_binding_site" gene 2842413..2843867 /locus_tag="lmo2761" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986859" CDS 2842413..2843867 /locus_tag="lmo2761" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="beta-glucosidase" /protein_id="NP_466283.1" /db_xref="GeneID:986859" /translation="MEHNKLKPFPKDFLWGSASAAYQVEGAWDEDGKGPSVWDEFVRI PGTTFKETNGDVAVDNYHRYKEDVALMAEQGLKAYRFSVAWSRVIPHGNGEVNEAGLK FYDNLIDELLSYGIEPVVTLYHWDIPQGLQDEYGGWESRKVVEDFTNYAALLFERFNG RVKYWVTLNEQNVFISHGYKLAYHPPGVSDDKRMFAANHNANLANASAIAKFRELGTS GKIGPSFAYGPSYSIDANPANVLASENSEEFNAHFWMDVYTWGEYPTATWNWLEEHGL APEILPGDTELLKKGKPDFMGVNYYRSMTHAFNGKDGVGSGKMNTTGEKGTSEETGVP GLYKNTNNPYLEKTNWDWDIDPTGLRIGLRRITNRYKLPIMITENGLGEYDSLTEDHK IHDEYRIEYIRAHALAIQEAITDGVEMLGYCTWSFTDLLSWLNGYQKRYGFVYVDRDE NDEKELKRYKKDSFYWYKKTIEANGANLVEEQGK" misc_feature 2842425..2843828 /locus_tag="lmo2761" /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase [Carbohydrate transport and metabolism]; Region: BglB; COG2723" /db_xref="CDD:442035" regulatory 2843898..2843903 /regulatory_class="ribosome_binding_site" gene 2843914..2844216 /locus_tag="lmo2762" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986856" CDS 2843914..2844216 /locus_tag="lmo2762" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS cellbiose transporter subunit IIB" /protein_id="NP_466284.1" /db_xref="GeneID:986856" /translation="MKKILLVCAAGMSTSLLVTKMKAHATSIGEEIEIEALPVSEASN VVDKMDIVMLGPQVRYQKPQVDELVQGRIPVIVIDMKDYGMLNGKAVLEKAFAEIG" misc_feature 2843920..2844204 /locus_tag="lmo2762" /note="subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with...; Region: PTS_IIB_chitobiose_lichenan; cd05564" /db_xref="CDD:99906" misc_feature order(2843935..2843937,2843941..2843946,2843950..2843955, 2844082..2844084,2844160..2844162) /locus_tag="lmo2762" /note="active site" /db_xref="CDD:99906" misc_feature 2843935..2843955 /locus_tag="lmo2762" /note="P-loop; other site" /db_xref="CDD:99906" misc_feature 2843935..2843937 /locus_tag="lmo2762" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99906" regulatory 2844236..2844241 /regulatory_class="ribosome_binding_site" gene 2844249..2845601 /locus_tag="lmo2763" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986739" CDS 2844249..2845601 /locus_tag="lmo2763" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS cellbiose transporter subunit IIC" /protein_id="NP_466285.1" /db_xref="GeneID:986739" /translation="MSIMSKFEHGMERVLVPVANKLNSQRHIAAIRDAFILVFPLIMA GSIITLINFAVLSPDGFIAKILFLGKIFPNLADAQAVFSPVMQGSTNIMAILIVFLVA RNLAIFFKQDDLLCGLTSIGAFFIVYTPYTVVDNASYMTIKFLGAQGLFVAIIVAIIT GEVFSRLARSPRLMIKMPDQVPPAVARSFKVLIPVIIITILFSVINYLITLIAPEGLN DLVYTVIQAPLKDMGTNVFSVIIIGLVSNLLWVLGIHGPNTVAAIRDTIFTEPNLDNL SYVAQHGSAWGAPYPATWAGLNDGFANYGGSGMTLGLLIAIFIASRRADYRDIAKLSL APGIFNINEPVIFGLPIVLNPIMVIPFIITPAINTLIGYFFISTKLIPPVAYQVPWTT PGPLIPFLGTGGNWLALLVGLLCLAVATVIYLPFVLVSNKIAASDAAMDKNATASTEQ " misc_feature 2844258..2845574 /locus_tag="lmo2763" /note="Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]; Region: CelB; COG1455" /db_xref="CDD:441064" regulatory 2845600..2845605 /regulatory_class="ribosome_binding_site" gene 2845613..2846497 /locus_tag="lmo2764" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986173" CDS 2845613..2846497 /locus_tag="lmo2764" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ROK family transcriptional regulator" /protein_id="NP_466286.1" /db_xref="GeneID:986173" /translation="MKIAAFDIGGTALKMGVVLPHGEIILTKSAEISGSDGDQILAEM KVFLAENTDVTGIAVSAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIEN DANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSER PGAFRPGKYTLNETTTMLVLRRQYAELTGRPLEEITGEEIFANYDAHDAVSERLITEF YTGICTGLYNLIYLFDPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQ AGLLGAVYHFLQEENRHE" misc_feature 2845616..2846467 /locus_tag="lmo2764" /note="nucleotide-binding domain (NBD) of Fusobacterium nucleatum N-acetylmannosamine kinase and similar proteins; Region: ASKHA_NBD_ROK_FnNanK-like; cd24068" /db_xref="CDD:466918" regulatory 2846475..2846480 /regulatory_class="ribosome_binding_site" /locus_tag="lmo2764" gene 2846490..2846798 /locus_tag="lmo2765" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984518" CDS 2846490..2846798 /locus_tag="lmo2765" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS cellbiose transporter subunit IIA" /protein_id="NP_466287.1" /db_xref="GeneID:984518" /translation="MNEMETVIFGMISQVGSARSSYLEGLRAAREGNFEEAEAKLKEG GETLANGHHEHHKLIQKEASGEKVEIQLLLIHAEDLLITTETLREVVTEFVHVYKKIN " misc_feature 2846499..2846789 /locus_tag="lmo2765" /note="PTS_IIA, PTS system, lactose/cellobiose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_lac; cd00215" /db_xref="CDD:238133" misc_feature order(2846499..2846501,2846661..2846663,2846709..2846714, 2846733..2846735) /locus_tag="lmo2765" /note="methionine cluster [active]" /db_xref="CDD:238133" misc_feature order(2846544..2846546,2846715..2846717,2846721..2846729) /locus_tag="lmo2765" /note="active site" /db_xref="CDD:238133" misc_feature 2846715..2846717 /locus_tag="lmo2765" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:238133" misc_feature 2846724..2846726 /locus_tag="lmo2765" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238133" regulatory 2846806..2846832 /regulatory_class="terminator" regulatory complement(2846806..2846832) /regulatory_class="terminator" gene complement(2846839..2847573) /locus_tag="lmo2766" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986816" CDS complement(2846839..2847573) /locus_tag="lmo2766" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="RpiR family transcriptional regulator" /protein_id="NP_466288.1" /db_xref="GeneID:986816" /translation="MFSYEVIRQFTETEHHLYRYIMDNRDKVMFMRVRELSEVTHVSP ASIVRFTRKLGCEGFSEFKVKLKQEATREVKKKTADTVEVLEEFFERTMNRDYDHVLD AAAEIINEADLVVFFGIGTSGILAEYGSRFFSNMKKRTFYIKDPFYPNPGEQFKNKAV MIILSVSGETDQVLEQAQNMQQYGSRIISITNTSHNTLAGLSDVNIPYYVTQEMVDKT NITTQIPVLFLLEAMAKKNYNQEQEE" misc_feature complement(2846845..2847549) /locus_tag="lmo2766" /note="DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains [Transcription]; Region: RpiR; COG1737" /db_xref="CDD:441343" regulatory complement(2847585..2847590) /regulatory_class="ribosome_binding_site" gene complement(2847673..2848335) /locus_tag="lmo2767" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986810" CDS complement(2847673..2848335) /locus_tag="lmo2767" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2767" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466289.1" /db_xref="GeneID:986810" /translation="MTTETETIKPQLAELKANLTKRNLQYVMEVEKHLRETHYGEEQQ EIIVYEMSEKILAEQKKGITARKLFNLTPTEYVVSLDVKAATVEQNTDKWWLVLDGGL LVLGAMMLISGISAYFQKNAQTLGIIVLLITAVVGGFAMLILRKYASNMRAGQKGGTI KYLLVAVGVIAVWMFVMTIVQVTIPPNINVALSPIVNTVGGAIIIALRFYVKKKKNIP SL" misc_feature complement(2847679..2848329) /locus_tag="lmo2767" /note="Uncharacterized membrane-anchored protein [Function unknown]; Region: COG4858" /db_xref="CDD:443886" regulatory complement(2848344..2848349) /regulatory_class="ribosome_binding_site" gene complement(2848406..2849536) /locus_tag="lmo2768" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986273" CDS complement(2848406..2849536) /locus_tag="lmo2768" /experiment="EXISTENCE:[PMID:19448609]" /note="hypothetical membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466290.1" /db_xref="GeneID:986273" /translation="MFNRGLWYREWRNMRWMLLGVVILFFLGITLGLMSDADRWNSQK EYYESSEFLKQQKENPEFKTSDEEMKASLTVAYLTVPMYTNFVQDEFVDYMPFMFYFQ VEMFFTLIKVSVFILGVLAVIFERYTRANRFTASLPYKRTHIVGVKMIMGIATIGLSY LISMGIGLTYFMSHVPKEYIQLDAPKFWVDIVGGLFTYILIFLVAILIGLLIGSPIAA AFVAFGVMLLPNVLNPTLDNMYNFIWPHGGDKGMSKLLRFEDYVNVFSPFSFESASFG AVIFSVILSVLMVVAILILYKKQHIERSGYLFAFSWVKWPFLVLFSLFVGMTAANLAV TDTELGFVGYLAWGIGATIGSFILALYILNKMRGLFQLSKTN" misc_feature complement(2848841..2849293) /locus_tag="lmo2768" /note="ABC-type transport system involved in multi-copper enzyme maturation, permease component [Posttranslational modification, protein turnover, chaperones]; Region: NosY; COG1277" /db_xref="CDD:440888" regulatory complement(2849550..2849555) /regulatory_class="ribosome_binding_site" gene complement(2849563..2850450) /locus_tag="lmo2769" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986801" CDS complement(2849563..2850450) /locus_tag="lmo2769" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_466291.1" /db_xref="GeneID:986801" /translation="MKIRNLTKKMDDNLVLKDVSFDLKAGEITALIGRNGVGKTTLFS TMTGIYLPDEGDVFLDEESIFKHPEVKQQLFFLEDNMNHFNTYSVQTVVKIYRQIYTT FDEAFFNELMQQFELPMKAKLMSFSKGRKALFFIILAFSLNVRFLLLDEPLDGLDIII KKQILATIKDTVKKRGTSVVIASHRLEELEAIADRVIVLKGASVELDYYLEDMRTDAV KIQVAFKTKKIPGFVKNNAQLLYRNGRIYTLLVTENASSFLAELRLEEPVLLEEMSIS IEDIFTVHLANDKIDYYEI" misc_feature complement(2849815..2850444) /locus_tag="lmo2769" /note="ABC-type multidrug transport system, ATPase component [Defense mechanisms]; Region: CcmA; COG1131" /db_xref="CDD:440746" regulatory complement(2850458..2850463) /regulatory_class="ribosome_binding_site" regulatory 2850607..2850612 /regulatory_class="ribosome_binding_site" gene 2850620..2852950 /locus_tag="lmo2770" /db_xref="GeneID:986798" CDS 2850620..2852950 /locus_tag="lmo2770" /EC_number="6.3.2.2" /EC_number="6.3.2.3" /experiment="EXISTENCE:[PMID:19448609]" /note="Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine" /codon_start=1 /transl_table=11 /product="bifunctional glutamate--cysteine ligase/glutathione synthetase" /protein_id="NP_466292.1" /db_xref="GeneID:986798" /translation="MIKLDMTMLDSFKEDPNLRKLLFSGHFGLEKENIRVTSDGKLAL TPHPAIFGPKEDNPYIKTDFSESQIEMITPVTDSIDSVYEWLENLHNIVSLRSENELL WPSSNPPILPAEEDIPIAEYKTPDSPDRKYREHLAKGYGKKIQLLSGIHYNFSFPEAL IDGLYANISLPEESKQDFKNRLYLKVAKYFMKNRWLLIYLTGASPVYLADFSKTKHEE SLPDGSSALRDGISLRNSNAGYKNKEALFVDYNSFDAYISSISNYIEAGKIESMREFY NPIRLKNAHTDQTVESLAEHGVEYLEIRSIDLNPLEPNGISKDELDFIHLFLIKGLLS EDRELCANNQQLADENENNIALNGLAQPSIKNCDNEDIPLADAGLLELDKMSDFIKSL RPEDTKLRAIIEKQKERLLHPEKTIAAQVKQQVTKEGYVDFHLNQAKTYMEETEALAY KLIGAEDMELSTQIIWKDAIARGIKVDVLDRAENFLRFQKGDHIEYVKQASKTSKDNY VSVLMMENKVVTKLVLAEHDIRVPFGDSFSDQALALEAFSLFEDKQIVVKPKSTNYGW GISIFKNKFTLEDYQEALNIAFSYDSSVIIEEFIPGDEFRFLVINDKVEAVLKRVPAN VTGDGIHTVRELVEEKNTDPLRGTDHLKPLEKIRTGPEETLMLSMQNLSWDSIPKAEE IIYLRENSNVSTGGDSIDYTEEMDDYFKEIAIRATQVLDAKICGVDIIVPRETIDRDK HAIIELNFNPAMHMHCFPYQGEQKKIGDKILDFLFD" misc_feature 2850638..2852947 /locus_tag="lmo2770" /note="bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB; Region: PRK02471" /db_xref="CDD:179427" regulatory 2852956..2852979 /regulatory_class="terminator" regulatory complement(2852956..2852979) /regulatory_class="terminator" gene complement(2852988..2854436) /locus_tag="lmo2771" /db_xref="GeneID:986786" CDS complement(2852988..2854436) /locus_tag="lmo2771" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="beta-glucosidase" /protein_id="NP_466293.1" /db_xref="GeneID:986786" /translation="MSNTKFPDGFMWGGATAANQFEGGYNLGGKGLACADLFTGGTHT EPRRITAQLEESTFYPSHEAVDFYHHYKEDIKLMAEAGFKVFRMSINWTRIFPTGKEA EPNEEGLQFYEDVFNELKKHQIEPLVTIAHFDIPLALTNEVNGWASRDLIDYYLHFCE VIFKRYKHLVKHWLTFNEINTATMEIGNYLSLGIRHAEGDFLHQKDDPKVRYQALHHQ FVASAKAVKLGHSINPDFMIGCMIAYMPRYPRTCEPSDVLLAKQTEAMHSHFCGDVHV KGYYPFYAKTFFKDNGIELEFDPEDEQILREGTVDFYTFSYYLTLCASNDPAYKNSGK SVIGGAENPYLKTNDWGMQTDPVGLRIALNDLYTRYNIPLMVVENGLGAFDKLEDDGT INDPYRIDYFKEHILQMHKAIQDGVDLIGFTIWGCIDLVSASTGEMAKRYGIIYVDKY DDGTGDYSRKKKASYYWYKDVISSNGEIGLEE" misc_feature complement(2853018..2854433) /locus_tag="lmo2771" /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase [Carbohydrate transport and metabolism]; Region: BglB; COG2723" /db_xref="CDD:442035" gene complement(2854429..2856282) /locus_tag="lmo2772" /db_xref="GeneID:986779" CDS complement(2854429..2856282) /locus_tag="lmo2772" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS beta-glucoside transporter subunit IIABC" /protein_id="NP_466294.1" /db_xref="GeneID:986779" /translation="MDYNQLAKEILQAVGGKNNVNEVYHCITRLRFQLKDQSKVNEKQ LKGLDKVMGTNVAGNQFQVIIGNDVPKVFDALAAENPAWKNKETTNKTTRQKGIKGFF SNIFDALSGVFAPILPAIAGAGLIKGFMALFVSLGWLATDTETYRILLAIGDGVFYFL PILVAVSAARYFKANMFVALGIGAALLYPDLTALLSAGTTPHFIGLPVTPVTYAYSVI PILLAIWIMSYVEKWVDRIIPTSLKLLFVPLITMFIVVPLTLVVIGPLGTFVGDGVSG GINWLLNNGGAIGGILIGGAMAIIVMTGMHYAIVPFVISNLAKYGYDKFLPLTYISNM SQAGATFGVFFRAKDKKLKSLAFSTGLTALMGVTEPAMYGINVVYKRPFMASLIGGAA GGGFAMMFGVKAYVLTGNGGIPGLPGLVGDTFVYALIAMALAFIVALIFSYIFGIDEQ MVEATPVAEKIAAGTEILQAPVTGELVKMSQVNDTTFADEIMGKSIAIKPNEGKLYAP ANGTIISLFKTKHAIAMKSDNGAEILLHVGIDTVKLDGNYFTAHVATGDVVEQGDLLV TFDMEKIAEKYDTTTMMVITNTNEYAVVEAKENGIVTKGNQVMELRSEQNE" misc_feature complement(2854450..2856276) /locus_tag="lmo2772" /note="PTS system, beta-glucoside-specific IIABC component; Region: PTS-II-ABC-beta; TIGR01995" /db_xref="CDD:273919" regulatory complement(2854444..2854449) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2772" regulatory complement(2856289..2856294) /regulatory_class="ribosome_binding_site" gene complement(2856379..2857218) /locus_tag="lmo2773" /db_xref="GeneID:986771" CDS complement(2856379..2857218) /locus_tag="lmo2773" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional antiterminator" /protein_id="NP_466295.1" /db_xref="GeneID:986771" /translation="MRIERILNNNIVSAISEDAQELLILGKGLGFNSKVGDPINESKI EKVFELKDDTMDKFKMIVNEIPIQFLEVTDDIVKLFKMKTAKDISDVIYISLSDHLYF ATQRLQENVVIENPLSWEVKRFYQEEYAVAKEAAKMVESKLEIELPDAEISNIALHFV NAEVDSDMNDVTHIMQLIQEIISIIKYHFNIEFDEESTNYYRFMTHLKFFCQRVIIGE TIDEMDEFLYQTVKKSRGVIFDCIDKIGVFLEKNYQFTMSHSEQFYLALHIERLLKRK NNQ" misc_feature complement(2856397..2857218) /locus_tag="lmo2773" /note="transcriptional antiterminator BglG; Provisional; Region: PRK09772" /db_xref="CDD:170086" regulatory complement(2857227..2857232) /regulatory_class="ribosome_binding_site" gene complement(2857580..2858203) /locus_tag="lmo2774" /db_xref="GeneID:986770" CDS complement(2857580..2858203) /locus_tag="lmo2774" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_466296.1" /db_xref="GeneID:986770" /translation="MIELVNVSKKIQDKLILEKVSLSIGAGEFIAVVGESGSGKTTLL NVIGHLDSKDSGQVIINEMEYQTKKEVMTLKKEVLGFIFQNYLLMENETVLENLSITG GENRKLMIEHLEEVGMDESYLAKKVYQLSGGEKQRIAIVRILLKPFQLLLADEPTGNL DDKNKQKIIELFLALKKQGKTIVCVTHDPEISAKADRIIYIEGGEIR" misc_feature complement(2857601..2858194) /locus_tag="lmo2774" /note="putative bacteriocin export ABC transporter, lactococcin 972 group; Region: L_ocin_972_ABC; TIGR03608" /db_xref="CDD:188353" gene complement(2858196..2860364) /locus_tag="lmo2775" /db_xref="GeneID:986174" CDS complement(2858196..2860364) /locus_tag="lmo2775" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="bacteriocin transporter" /protein_id="NP_466297.1" /db_xref="GeneID:986174" /translation="MKKFLSIIILVTLIIGNVMFFNFISNTLSRDFLFKEQTVVQFKY KEDYQVSDFNNSIKTFSETKNINIAQYTFLGERDLNIYGSNCQFAPNINLKKGDYPNK NQFLANEESVDKKQSGVIYHPSKYWSLKVYDFGQIKNVGLSDTFYVSGLDNQNTYQAF LKEFEQYGEVTTKSVDVSWWKYINIPLLMTLLLCFAILFVFTYYYLRYSKQRLLVNRI WGNSELVTLMSLFNKTIIFTLFSVLAILITFVSIVLANGLATYLVEIVWKLLLFNVLL FIFILFPMYFFGLLRIKKIDQAKSDQRMQSSRQHLAINLVIKFVLLCLFIGTFIASYQ SLQTLNTRLANIDVWEATKDIFKVKVGVLPEGIQDDLKADKELNDNLSAFYEEGTSKK EMFLMYSNNFQRSETNTFFYETYLKKGSEINSPEGNSVEIDFNYLKLNPIKSIKGQNV GKEAIISDKVLNIIVPNSKKGLEKDIKNTFLDYFYFQKVEVANIYNEALDLPAVALSK EDLRVNIIYAENNQDYFSYDSNTGDFRTGNITDPIAIVYTGNIDSSSIGAHVTSSVYF VDKSNGDAFNAILPLISNSNAREITHVRSVYQEVSSEITTLKWQIYQQLIGTIILALC LCSFMVLLVLSYYRENLYKQLIYHVFGYSFWKSSKWFIISNLFVSVFSGILIFILSKE PVALYFSVVILIIELCAIYFIKEKAIYKDFKAILKGEKYD" misc_feature complement(2858211..2860337) /locus_tag="lmo2775" /note="bacteriocin-associated integral membrane (putative immunity) protein; Region: bact_immun_7tm; TIGR01654" /db_xref="CDD:273736" regulatory complement(2858209..2858214) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2775" regulatory complement(2860370..2860375) /regulatory_class="ribosome_binding_site" gene complement(2860426..2860821) /locus_tag="lmo2776" /db_xref="GeneID:986012" CDS complement(2860426..2860821) /locus_tag="lmo2776" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2776" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466298.1" /db_xref="GeneID:986012" /translation="MKKKVCVLAIALLTVLSPMGALAAQNLNEGETSLDSLMSANKTG EKVIFSETTTGKKPLLKAAQSAGGGTFWVTWGQDRHYSNYQHTKKTHRSSASNYRATE RSSWKAKNNLATAWIKSSLWGNKANWATK" misc_feature complement(2860429..2860821) /locus_tag="lmo2776" /note="bacteriocin, lactococcin 972 family; Region: lactococcin_972; TIGR01653" /db_xref="CDD:273735" regulatory complement(2860830..2860835) /regulatory_class="ribosome_binding_site" regulatory 2861411..2861416 /regulatory_class="ribosome_binding_site" gene 2861424..2862614 /locus_tag="lmo2777" /db_xref="GeneID:984804" CDS 2861424..2862614 /locus_tag="lmo2777" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="multidrug transporter" /protein_id="NP_466299.1" /db_xref="GeneID:984804" /translation="MEKNIETKKINLALLVCLVGFPQISETIYTPSLTEIAKGYGVSL NLAQMTLSIYFLAFAVGVFFWGVSSDFLGRRKAMNFGIFIYILGCFACLFSNNITMLF IGRFVQAFGASTGSVTTQTILRDNYHGNDRHHLFAKISAALAFSPAIGPLIGGFIGQY YGFRVVFLFLVVMGMILLFWSLKRLPETKTVNATSFSVQKIVVIGKKMIFDRYTIAFG ALIGIFNGILFSYYSEAPTIFIERFHLNQSQYGFMGCAVAMATILGAWLSNWRLMQNS PHKIIKEGILLAIIGTLALSVVAIFPLTNQVILYILFISIILAGIGMALPNCLSLALV KFQEAAGTASAFLSLGYYVIVSLCTFFIGVLHSGSMLVFPSFCLVLLLIALLCIKIAT RNNR" misc_feature 2861457..2862545 /locus_tag="lmo2777" /note="Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_MdfA_MDR_like; cd17320" /db_xref="CDD:340878" misc_feature order(2861487..2861492,2861499..2861504,2861574..2861576, 2861583..2861588,2861757..2861759,2861850..2861852, 2861859..2861864,2862108..2862110,2862117..2862119, 2862477..2862479) /locus_tag="lmo2777" /note="chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340878" regulatory 2862623..2862652 /regulatory_class="terminator" regulatory complement(2862740..2862765) /regulatory_class="terminator" gene complement(2862774..2863283) /locus_tag="lmo2778" /db_xref="GeneID:986767" CDS complement(2862774..2863283) /locus_tag="lmo2778" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2778" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466300.1" /db_xref="GeneID:986767" /translation="MIQLMVIAFFVVLLVIMPKNNKEERKAAHLLIDKYGIQVAKKNN PVRQMALLEVALGISTYRGSRKKTFIFIGGFFVIAFILGYLTYFFGINRNITATIIVG IILTLFLIAGTIIMFVIAIRQASSLRTDAWAKILTTIDPQFPVEFLNEKKWQKAFLAQ MESMNEQLA" regulatory complement(2863290..2863295) /regulatory_class="ribosome_binding_site" regulatory complement(2863511..2863544) /regulatory_class="terminator" gene complement(2863561..2864661) /locus_tag="lmo2779" /gene_synonym="ychF" /db_xref="GeneID:986766" CDS complement(2863561..2864661) /locus_tag="lmo2779" /gene_synonym="ychF" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="GTP-binding protein EngD" /protein_id="NP_466301.1" /db_xref="GeneID:986766" /translation="MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGIV EVPDHRLNKLTELVKPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICH VTRCFDDENITHVEGRVDPLDDISTINLELILADLETVEKRIGRVEKLSKQKDKDAVA EYNVLVKLREAFENDKPARAIEFNEEEEKIVRNLFLLTRKPVLYVANVSEEDVSSPDD NKYVQQVREFAASENSEVIVVCARAEEEIAELEDEDKLEFLEALGIEESGLDQLIRSA YTLLGLATYFTAGVQEVRAWTFIKGMKAPQCAGIIHTDFERGFIRAEVVAYDALLEYG SEQAAKEAGKVRLEGKEYEMKDGDVVHFRFNV" misc_feature complement(2863564..2864655) /locus_tag="lmo2779" /gene_synonym="ychF" /note="Ribosome-binding ATPase YchF, GTP1/OBG family [Translation, ribosomal structure and biogenesis]; Region: GTP1; COG0012" /db_xref="CDD:439783" regulatory complement(2864671..2864676) /regulatory_class="ribosome_binding_site" regulatory complement(2864775..2864805) /regulatory_class="terminator" gene complement(2864813..2865121) /locus_tag="lmo2780" /db_xref="GeneID:985440" CDS complement(2864813..2865121) /locus_tag="lmo2780" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS cellbiose transporter subunit IIA" /protein_id="NP_466302.1" /db_xref="GeneID:985440" /translation="MEGMELASFQIISSVGAARSCIIEAMKLGRQRKFTEAYKKIDEA NEFLSEGHKNHVQLIQKEADGGDVQISILFMHAEDQFMTTYTLRDVAYEMIAIWKEMK " misc_feature complement(2864822..2865112) /locus_tag="lmo2780" /note="PTS_IIA, PTS system, lactose/cellobiose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_lac; cd00215" /db_xref="CDD:238133" misc_feature complement(order(2864876..2864878,2864897..2864902, 2864948..2864950,2865110..2865112)) /locus_tag="lmo2780" /note="methionine cluster [active]" /db_xref="CDD:238133" misc_feature complement(order(2864882..2864890,2864894..2864896, 2865065..2865067)) /locus_tag="lmo2780" /note="active site" /db_xref="CDD:238133" misc_feature complement(2864894..2864896) /locus_tag="lmo2780" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:238133" misc_feature complement(2864885..2864887) /locus_tag="lmo2780" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238133" gene complement(2865127..2867397) /locus_tag="lmo2781" /db_xref="GeneID:984462" CDS complement(2865127..2867397) /locus_tag="lmo2781" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="beta-glucosidase" /protein_id="NP_466303.1" /db_xref="GeneID:984462" /translation="MAVYLDKEKPVSERVEDLLSKMTLAEKCGQLNQRMYGWEAFSRD GETFQITEKFKEEVTRFEGIGALYGLFRADPWSKMNKDTGVSRKNAGKVANKIQRYVI ENTRLGIPVLLAEEVPHGHQALDSESYPVNLARAASFNPELQKQVASAITEEISEKGV HLALASALDVLRDPRWGRAEECYGEDPYLAAELTAAITEGFQASGKIAVILKHFAAQG EPIGGHNSGPVSIGVRELREIFLDPMRAGIRSGALGVMAAYNEIDGVPCHANKELLTT ILREEMGFSGIVMADGCALDRLLKLNPDPKKAAKMALEAGVDLSLWDEVFPFLEESVE KGILDEKIVDDAVSRVLQVKFQLGLFEQPFVEEDIQEPKSDWRQLNLQAAREGICLLK NDFETLPLVGEPKKIAVVGPSIDSLYNQLGDYTAPQNESECVTVLEGIKNQLPENWEV LSEKGAEIREELPDGIQRAEVVAKEADAIVMVLGGSSARNFDMEFLNNGAVSSKGPNM DAGENVDVADITLPQPQLDLFYAMKRTGKPVIVVMIQGRPIAIPEISLAADAILTAWY PGSLGGTAIAEVLFGHYNPSGKLPVSIPRSSGQIPIYYNQKAVEYKEDYFDLTGKPLY PFGYGLSYSTFEYQDLQIKQESIKISELLGGQSVEVKVTLKNISNVAGEEVVQLYIHD MEASITRRKKELKAFKKVRIAANQTTTVTFKLDKSSFEIWSINNKYEVEPGGIEIFVG GSSDTKLTGRVSIIGG" misc_feature complement(2865178..2867355) /locus_tag="lmo2781" /note="beta-glucosidase BglX; Region: PRK15098" /db_xref="CDD:185053" regulatory complement(2865131..2865136) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2781" regulatory complement(2867404..2867409) /regulatory_class="ribosome_binding_site" gene complement(2867432..2867731) /locus_tag="lmo2782" /db_xref="GeneID:984812" CDS complement(2867432..2867731) /locus_tag="lmo2782" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS cellbiose transporter subunit IIB" /protein_id="NP_466304.1" /db_xref="GeneID:984812" /translation="MKNIMLMCNAGMSTSVLVRKMERVVEERNLELTIWAISETDFEK NWRKADAILLGPQVNYMKDKVIDTVGDNVSVAVIDIVDYGRMNGEKVLDLAISLL" misc_feature complement(2867441..2867725) /locus_tag="lmo2782" /note="subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with...; Region: PTS_IIB_chitobiose_lichenan; cd05564" /db_xref="CDD:99906" misc_feature complement(order(2867483..2867485,2867561..2867563, 2867690..2867695,2867699..2867704,2867708..2867710)) /locus_tag="lmo2782" /note="active site" /db_xref="CDD:99906" misc_feature complement(2867690..2867710) /locus_tag="lmo2782" /note="P-loop; other site" /db_xref="CDD:99906" misc_feature complement(2867708..2867710) /locus_tag="lmo2782" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:99906" regulatory complement(2867739..2867744) /regulatory_class="ribosome_binding_site" gene complement(2867746..2869041) /locus_tag="lmo2783" /db_xref="GeneID:984856" CDS complement(2867746..2869041) /locus_tag="lmo2783" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS cellbiose transporter subunit IIC" /protein_id="NP_466305.1" /db_xref="GeneID:984856" /translation="MKKFIEKLSWLSQKLGNQIHLKSMRDAFATILPFIMLAGFMVLI NNVIIKPDGFMSAIISSETLTTWQGLGNSIVNGTLGIITILIGASVAYFLAQNRKFEN PFAPALMTIALIVIFIPAVTEIVPIGAEKSVEVAGVLPIALMGSAGMFVGIVTALLAT EVFIRLSKSEKMKIHISGDSVPPAVIKSFNVLIPTMLTILIFAFISFLVVTLFSLNLY SLISAIIQEPLTFLVTSVPGFLTLMTISQMLYSIGIAGSGILGPIMDPVLLANMQENM TAFANHTEIPHIINTTFRDVFGVMGGGGNTIALLLAIFIWSKRKDYREIATLSAAPGL FNINEPVVFGLPIVYNLSLMIPFIISTPLCLCLAYFATKLHMISEVVVMVPWTTPVVA SGFLATGGDWRAAVFQIFLIGVCVLLYLPFLKANDRIKA" misc_feature complement(2867752..2869041) /locus_tag="lmo2783" /note="Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]; Region: CelB; COG1455" /db_xref="CDD:441064" regulatory complement(2869051..2869056) /regulatory_class="ribosome_binding_site" regulatory complement(2869135..2869184) /regulatory_class="terminator" gene complement(2869191..2871107) /locus_tag="lmo2784" /db_xref="GeneID:984381" CDS complement(2869191..2871107) /locus_tag="lmo2784" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional antiterminator" /protein_id="NP_466306.1" /db_xref="GeneID:984381" /translation="MSASKLSLPRWKQIVHMLYLKMEFISGGELGEALAVNPRTIRND IKVINQILTIGGNRIESLPGVGYRLVIGDEKALREALLDDSVGRANMNIVPMFAEDRA DYIIRYLLLKNDYVKLETLSEELFVSKSTINLDILEVKRKLKENELKVEKRAGYGIRI TGAELAIRFCFSRYLLVESTSPLITETEINFFGEVNLEMMEQIVVSNIAKYNIHMTDI SVKNLIIHIAIAVCRVKDNCYVPATDLEDIEFSMPELRAAQGIIKEIDLSEGIRFPES ETAYLLLHLSSKNRKSDFNNYREYIIVDKMLAKIKELYGYDFKQDQKMISNIALHLKP AINRIKFNMNIQNPYLKNLKANYPLAFELGLVAKEVLEQELKTNVDEAEVGYLAIHFL YGLDKEIESEKQKVLIVCASGLGTSQLLESKVRKEFENTLEIVGVYSFKEYEQSGTMC DFVISTVPLRMKLHPFIQVSPFLTKADIRNITALMKQDETKNQFEVDKVFKESLFLIS DKKDKEQVLVNLASLLLENNIVGEDYLPSLFEREEIVPTYLGNGLAAPHPIEANVQET AIGVCICVGGGVKWNEEDQAQVIFMLAVKNKQQQQLATVYELISNLVESPKAMGELKR VTSFEEFMRVLQTL" misc_feature complement(2869200..2871068) /locus_tag="lmo2784" /note="Transcriptional antiterminator [Transcription]; Region: BglG; COG3711" /db_xref="CDD:442925" regulatory complement(2871116..2871121) /regulatory_class="ribosome_binding_site" regulatory complement(2871275..2871311) /regulatory_class="terminator" gene complement(2871318..2872784) /gene="kat" /locus_tag="lmo2785" /db_xref="GeneID:984948" CDS complement(2871318..2872784) /gene="kat" /locus_tag="lmo2785" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="catalase" /protein_id="NP_466307.1" /db_xref="GeneID:984948" /translation="MTDRKNLTTNQGVPVGDNQNSMTAGRKGPTLIEDYVLIEKLAHF DRERVPERVVHARGAGAHGKFVTKKSMKKYTMAKFLQEEGTETEVFARFSTVIHGQHS PETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGN RYWDFFSLTPEATTMIMYLFSDEGTPASYREVRGSSVHAFKWINEEGKTVYVKLRWVP KAGIVNLSTEQASQIQAKEFNHASRDLYEAIENGDYPEWDLYVQVLDPKDLDSFDFNP LDATKDWFEDVFPYEHVGTMTLDRNPDNIFAETESVGFNPGVLVRGMLPSEDRLLQGR LFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGHMPFKQQTSSINYEPNSYDTEPK ENPAFIEPEQEIRGDISGRLIAEKPNNFGHAKEVWDRYSNAERAALVKNIVDDWSQVR EDIKIRNLRNFYQVDPEFASRVAAGTGINLEEHVTDLK" misc_feature complement(2871357..2872769) /gene="kat" /locus_tag="lmo2785" /note="Clade 1 of the heme-binding enzyme catalase; Region: catalase_clade_1; cd08154" /db_xref="CDD:163710" misc_feature complement(order(2871417..2871419,2871429..2871431, 2871435..2871437,2871441..2871446,2871627..2871644, 2871669..2871677,2871681..2871683,2871690..2871692, 2871696..2871701,2871711..2871713,2871723..2871734, 2871738..2871743,2871747..2871755,2871762..2871767, 2871774..2871782,2871789..2871791,2871798..2871800, 2871804..2871806,2871828..2871833,2871852..2871854, 2871861..2871863,2871867..2871872,2871876..2871878, 2871954..2871956,2871960..2871962,2871975..2871980, 2872047..2872049,2872056..2872061,2872068..2872070, 2872080..2872085,2872092..2872094,2872101..2872103, 2872293..2872295,2872302..2872304,2872314..2872331, 2872347..2872349,2872356..2872358,2872362..2872376, 2872419..2872424,2872479..2872484,2872626..2872628, 2872641..2872643)) /gene="kat" /locus_tag="lmo2785" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:163710" misc_feature complement(order(2871771..2871773,2871783..2871785, 2872362..2872364,2872386..2872388,2872401..2872403, 2872503..2872505,2872620..2872622)) /gene="kat" /locus_tag="lmo2785" /note="heme binding pocket [chemical binding]; other site" /db_xref="CDD:163710" regulatory complement(2872794..2872799) /regulatory_class="ribosome_binding_site" regulatory complement(2872889..2872921) /regulatory_class="terminator" gene complement(2872932..2873915) /gene="bvrC" /locus_tag="lmo2786" /db_xref="GeneID:986755" CDS complement(2872932..2873915) /gene="bvrC" /locus_tag="lmo2786" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466308.1" /db_xref="GeneID:986755" /translation="MKTRVFGVLAGGALGDAMGMPTECWSQEKIRAIYPNGVETLLPS DESDAFGRKLAAGSITDDTINVLMIAEMIKKNNGQIRVEDYVAELVEWNANSGVSEFV SGPSTLRALKQISEGVPITKTGISGTTNGASMKIAPIGIIANYEDMEDLVSKVHQICL PTHNAKIAIQGASAVAAAISYVARGGNIVDKIWELAYEAIEVASNYGYDFPSASLKFR MDKAREIIGEETGPATALKRLYEEIGSGMETIETIPCAFAIVELAKGDPVEAAKLSAC IGWDTDTIGAISAGICGGMSPTIPENYIEMIERVNNINLTQVSEDLYIHVL" misc_feature complement(2872947..2873915) /gene="bvrC" /locus_tag="lmo2786" /note="ADP-ribosylglycohydrolase [Posttranslational modification, protein turnover, chaperones]; Region: DraG; COG1397" /db_xref="CDD:441007" gene complement(2873915..2875837) /gene="bvrB" /locus_tag="lmo2787" /db_xref="GeneID:986754" CDS complement(2873915..2875837) /gene="bvrB" /locus_tag="lmo2787" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="beta-glucoside-specific phosphotransferase enzyme II ABC component" /protein_id="NP_466309.1" /db_xref="GeneID:986754" /translation="MGKYQALSKFILENVGGKENVLSVTHCMTRLRFTLKDDSKVNED ILKKSSEIMTAQFAGGRFQVVIGTHVSDVYNEIQGVTGADKIAEAEVKKTGLNRLIEI ITKVITPVLGILTASGLLQGILALLTITNVIDVNDGGYIVLHAMGQAVFYFLPVVLGY TSAKAFNLNPYVGMMLGATLVIPELMTNLVTDKALYTLFDGTMFSTPVYNTFFGIPIL FPPNGYQYTVIPVIFITFLGAKVEKILKKIVPPLLAHNLNSFLTILITFPLAILIIGP VTNVLSSLISAGVSGLYEVSPVITSVVVGLLYQPLVIFGLHWPMSAIGINNLAQYGVD YIFPMSFTASFAQTAVVLAVYLKTRSRNQKALAIPAMISGMFCIIEPAIYGFSLPVKK RFAFSMIGGAVGSLIISIFSVKMYAFAFGVLGFVSFINPANSSLGGLYVAIFATIVTM AVSFSLTFFTFKSSEDVVDEETKPLIKQQEVLAPIAGTMQPISSSADETFASKTMGEG VVIFPTGSKVVAPAAGVVTTVFPGGHALGITTENGTEILIHIGIDTVELNGEGFDVQV EVGSKVKQGQTLVNVDFEAIENKGYKSEVLVVILNTDDFLDIISEEKTTVKQGGKMLT LIPFNGKATNDMEVSY" misc_feature complement(2873960..2875828) /gene="bvrB" /locus_tag="lmo2787" /note="PTS system, beta-glucoside-specific IIABC component; Region: PTS-II-ABC-beta; TIGR01995" /db_xref="CDD:273919" regulatory complement(2873926..2873931) /regulatory_class="ribosome_binding_site" /gene="bvrB" /locus_tag="lmo2787" regulatory complement(2875847..2875852) /regulatory_class="ribosome_binding_site" regulatory complement(2875865..2875921) /regulatory_class="terminator" gene complement(2875945..2876775) /gene="bvrA" /locus_tag="lmo2788" /db_xref="GeneID:986751" CDS complement(2875945..2876775) /gene="bvrA" /locus_tag="lmo2788" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcription antiterminator" /protein_id="NP_466310.1" /db_xref="GeneID:986751" /translation="MLRVKRVFNNNTILVHDSNGLEKIVIGKGISFNKRVGNIISEEA VEKTFIVDSPEITERFVQLIKEVPINHLDLTNKIIKDAESELNVTFDELTYLGLADHI NYAISRYKSGHQIKNALLLEIKKFYPKEFNAAKNSVKTISYYENVKLLEDEAGFIALH FVNGQQEGIINNTLITTEVLKKVLLILEDTLSIKLDEESLNYLRFITHLRFFIERINS EGAREKEEPDMIEQVFKLYPKAYASVQIISDYIQETLNCTVYAEELMYLTLHVQRLIK " misc_feature complement(2875948..2876772) /gene="bvrA" /locus_tag="lmo2788" /note="transcriptional antiterminator BglG; Provisional; Region: PRK09772" /db_xref="CDD:170086" regulatory complement(2876783..2876788) /regulatory_class="ribosome_binding_site" regulatory complement(2876911..2876936) /regulatory_class="terminator" gene complement(2876947..2877153) /locus_tag="lmo2789" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984400" CDS complement(2876947..2877153) /locus_tag="lmo2789" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2789" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466311.1" /db_xref="GeneID:984400" /translation="MFMEKKHFDLNDVVEMKKPHPCGTNRFKIIRMGMDIRIKCEGCG HSVMIPRREFERKVKKILVKAEQE" misc_feature complement(2876962..2877135) /locus_tag="lmo2789" /note="Uncharacterized conserved protein, DUF951 family [Function unknown]; Region: COG4481" /db_xref="CDD:443577" regulatory complement(2877159..2877164) /regulatory_class="ribosome_binding_site" gene complement(2877160..2878011) /gene="parB" /locus_tag="lmo2790" /db_xref="GeneID:986750" CDS complement(2877160..2878011) /gene="parB" /locus_tag="lmo2790" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="partition protein ParB homolg" /protein_id="NP_466312.1" /db_xref="GeneID:986750" /translation="MAKGLGKGINALFNNVDTNEETVQNIAIKEIKPNPYQPRKIFDA KAINELRDSIKIHGVLQPIILRNTDKGYEIVVGERRYRAAKEAKLKEIPAVVRDLTEE EMMELSVIENLQREDLSPLEEAESYQFLMKKLSLTQAKLAERVGKSRPYIANFVRLLT LPEEVQVMLRDGSLSAGHGRVLLGLKLKKNIIPTAKKAVAQGLTVRQLEDVVNNLNEN VSRETIKPARVPIFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL DIQFDDE" misc_feature complement(2877181..2877960) /gene="parB" /locus_tag="lmo2790" /note="Chromosome segregation protein Spo0J, contains ParB-like nuclease domain [Cell cycle control, cell division, chromosome partitioning]; Region: Spo0J; COG1475" /db_xref="CDD:441084" gene complement(2878004..2878765) /gene="parA" /locus_tag="lmo2791" /db_xref="GeneID:986989" CDS complement(2878004..2878765) /gene="parA" /locus_tag="lmo2791" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="partition protein, ParA-like protein" /protein_id="NP_466313.1" /db_xref="GeneID:986989" /translation="MSKVIALANQKGGVGKTTSSVNLSSSLAFLGKKVLLVDIDPQGN ASSGVGVNKGEIEHCIYDVLVDDVAIQDVLQKTDLDNLNVIPATIQLAGAEVELVPAI SREIRLKKAIDSIRDDYDYVIIDCPPSLGLLTLNALTAADSVLIPVQCEYYALEGLSQ LLNTIRIVQKHLNEDLQIEGVLLTMLDARTNLGIQVIEEVKKYFQNKVFNTIIPRNVR LSEAPSHGKPILLYDAKSKGAEVYLELAKEVVAHG" misc_feature complement(2878010..2878759) /gene="parA" /locus_tag="lmo2791" /note="ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ [Cell cycle control, cell division, chromosome partitioning, Cell motility]; Region: ParA; COG1192" /db_xref="CDD:440805" regulatory complement(2878021..2878026) /regulatory_class="ribosome_binding_site" /gene="parA" /locus_tag="lmo2791" regulatory complement(2878775..2878781) /regulatory_class="ribosome_binding_site" regulatory complement(2878946..2878978) /regulatory_class="terminator" gene complement(2878989..2879747) /locus_tag="lmo2792" /db_xref="GeneID:986982" CDS complement(2878989..2879747) /locus_tag="lmo2792" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2792" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466314.1" /db_xref="GeneID:986982" /translation="MIHSTLGGITKRMAKIIFVKDEQNEFQAYDFLQNLIVEEPLMAT LVFQGLLQIETAETRKLSTGKQILPDVHLIIGKSQAYSLQTTRVETTVDQPIQEMKAH FKDKNCRLIYFTAFSGDETYYCFVKGYFKDKNPFTDQMSSYREEVKRVFLRRIEAETS IGNADYQFETLKNKALENEGIAHYLESFSASLGKYIFSKRMEKKWSQLDLALKSDLSP VIIGRLEAGDPDLTLRMYQKVCTVLGVKATFSVD" misc_feature complement(<2879013..2879192) /locus_tag="lmo2792" /note="Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Region: HipB; COG1396" /db_xref="CDD:441006" regulatory complement(2879750..2879755) /regulatory_class="ribosome_binding_site" regulatory complement(2879869..2879897) /regulatory_class="terminator" gene complement(2879906..2880205) /locus_tag="lmo2793" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985066" CDS complement(2879906..2880205) /locus_tag="lmo2793" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2793" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466315.1" /db_xref="GeneID:985066" /translation="MRFLKIIGHAVGVISCLMVLPSFVIAITSAILSFNPLYITYFFT SPYARAVAVAEESGWGSGFNILLVNYGAYLIAFGYTFFAIVKIYSWYQIAKEVKK" regulatory complement(2880213..2880218) /regulatory_class="ribosome_binding_site" gene complement(2880217..2881071) /locus_tag="lmo2794" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986747" CDS complement(2880217..2881071) /locus_tag="lmo2794" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="NA-binding protein Spo0J" /protein_id="NP_466316.1" /db_xref="GeneID:986747" /translation="MPFSRLFGKKEKNQMDDIVEEGVQRVQELPMDKIFPNQFQPRTV FDQDKIDELARTIRIHGVIQPIVVREMEPDYYEIIAGERRFRAVLSLEMEKIPAIIQN LDDEEVAAIALIENLQREELTPIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKM RLLKLPETVQEAVLIKQISERHARSLLALETEEQQVALLAEIAENHWNVKQTEARIQE ILGVKKQVATKKTKPKRQAISRDVRIAMNTIKQSVTMVKDNGMDLDFTEEETDDFYQI TIQIPKKK" misc_feature complement(2880226..2880999) /locus_tag="lmo2794" /note="nucleoid occlusion protein; Region: nucleoid_noc; TIGR04285" /db_xref="CDD:275105" regulatory complement(2881079..2881084) /regulatory_class="ribosome_binding_site" gene complement(2881243..2882049) /locus_tag="lmo2795" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986746" CDS complement(2881243..2882049) /locus_tag="lmo2795" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="RpiR family transcription regulator" /protein_id="NP_466317.1" /db_xref="GeneID:986746" /translation="MTILNEIQQNYNRLPNKEKQIAKYILEKSDELKNINIKELAEET GTSISTITRFCRHVRCDSFVDLKMRVNTAATMVPSLGYDDLFEEVYSFYHKVIDNTVK LIEPAKIREVVQYIQEAKRVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIIT SSITTKEDFVIGISNSGNTPELVTALKNAKKNKSKVATFTSFENSEMTEISDVTIPVY NTLFVSKRYFANSQFSIMYVMDIISMMLLQNESYRDNMEKTINTVTDEFH" misc_feature complement(2881255..2882049) /locus_tag="lmo2795" /note="DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains [Transcription]; Region: RpiR; COG1737" /db_xref="CDD:441343" gene complement(2882033..2882938) /locus_tag="lmo2796" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986738" CDS complement(2882033..2882938) /locus_tag="lmo2796" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="NP_466318.1" /db_xref="GeneID:986738" /translation="MENYLCVDIGGTSIKYAKFNQEGKRVGELKSCVTPITGGANQIM PALIRIVEQEKTDVAGVCVASAGVVDSVKGKIIYAGYTIPKYTGTEIKAELEHRFNLP CAVENDVNAACLGEFWLGGARGCGSVLCLTIGTGIGGAMLLNDKLINGSSFTACEVGY MHLSQGRFQDVASTKALIKQVASRKNIEENALNGRQVMEWAYSGDADVLAEIEQWIEN LVEGVVNLIYIFNPEVIVLGGGLMEEESFFKPRLKAAISTKLISPMFDTADITFAKLG NEAGMIGALYHFLNQKEAEKDDDFK" misc_feature complement(2882078..2882932) /locus_tag="lmo2796" /note="nucleotide-binding domain (NBD) of Fusobacterium nucleatum N-acetylmannosamine kinase and similar proteins; Region: ASKHA_NBD_ROK_FnNanK-like; cd24068" /db_xref="CDD:466918" regulatory complement(2882059..2882064) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2796" regulatory complement(2882946..2882951) /regulatory_class="ribosome_binding_site" gene complement(2882963..2883409) /locus_tag="lmo2797" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986733" CDS complement(2882963..2883409) /locus_tag="lmo2797" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannitol transporter subunit IIA" /protein_id="NP_466319.1" /db_xref="GeneID:986733" /translation="MLLDRVTLEDIEVNLKAEDWREAIQMSARLLLERGAIKESYIDG MIQSVENNGPYIVIAKHIALAHTRPEFGVIHGGLTFATLADGVAFGSDMFDPVKLIIT LAATDSESHLEVLSELAEVLMDEEKVTRLIEANSSQAFYDELTKEG" misc_feature complement(2882984..2883394) /locus_tag="lmo2797" /note="PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This...; Region: PTS_IIA_fru; cd00211" /db_xref="CDD:238129" misc_feature complement(order(2883212..2883214,2883266..2883268)) /locus_tag="lmo2797" /note="active site" /db_xref="CDD:238129" misc_feature complement(2883212..2883214) /locus_tag="lmo2797" /note="phosphorylation site [posttranslational modification]" /db_xref="CDD:238129" regulatory complement(2883417..2883422) /regulatory_class="ribosome_binding_site" gene complement(2883422..2884078) /locus_tag="lmo2798" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986730" CDS complement(2883422..2884078) /locus_tag="lmo2798" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphatase" /protein_id="NP_466320.1" /db_xref="GeneID:986730" /translation="MLKAIVMDFDGIVIDTEVVWYEIFKEWFKTKQNYDLSIEEFLQC VGSNVDDLFRELNEKNQMDINRQVFEAETQATFIENSKSLPAKEGVESFIRELKERGL KLALATSSQRPKPLYHLERLGLLEYFDAIITAEDVTRIKPEPDLFLEALRALDVKASE SLIVEDSRNGLLAGNSAGVNVLVIPNEVTKHSDLTPNYLERESLAEVDLTEIMAEYNK " misc_feature complement(2883452..2884069) /locus_tag="lmo2798" /note="uncharacterized subfamily of beta-phosphoglucomutase-like family, similar to uncharacterized Bacillus subtilis YhcW; Region: HAD_BPGM-like; cd16423" /db_xref="CDD:319859" misc_feature complement(order(2883569..2883574,2883581..2883586, 2883656..2883658,2883749..2883757,2884043..2884057)) /locus_tag="lmo2798" /note="active site" /db_xref="CDD:319859" misc_feature complement(2883656..2883658) /locus_tag="lmo2798" /note="HAD signature motif III; other site" /db_xref="CDD:319859" regulatory complement(2884085..2884090) /regulatory_class="ribosome_binding_site" gene complement(2884141..2885547) /locus_tag="lmo2799" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986729" CDS complement(2884141..2885547) /locus_tag="lmo2799" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="PTS mannitol transporter subunit IIBC" /protein_id="NP_466321.1" /db_xref="GeneID:986729" /translation="MSIRVHVQKFGSKLSGMVIPNLGAFMAWGILTAIGVATGSEMLK GFIAPMLNYLLPLLIAFAGGRAVHGYRGGVIGTVATMGAIISSDITMFIGAMIMGPLA AWILKKFDERIDGKIPAGFELLVNNFSIGIIGAGLALFSYVAIAPMVEAVTKVLASGV DVLINNHLLPLTALIIEPAKVLFLNNAIGQGILSPLATLQLAETGKSVLYLLESNPGP GLGILLGYMFFGKGNSKASSYGASVIHLFGGIHEIYFPFVLMNPILILPLILGGMTGT FILTMTNAGLVGVASPGSIITIMMMAAPGDHIKILIAVLCAALVTFITAIPFIKRMGN KDSELQDAAKKMEGLKGKKSSISSVFEAPVDDFNFKNVKRIAYACDAGLGSSAMGATV LQKKIKNAGLEDIKVFHIAIHELPTECDVVVTHKSLIDRAKEKQPDAYYVEITDYLGA PEYQELIDKIVADREQKN" misc_feature complement(2884147..2885544) /locus_tag="lmo2799" /note="Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]; Region: MtlA; COG2213" /db_xref="CDD:441815" regulatory complement(2885555..2885560) /regulatory_class="ribosome_binding_site" gene complement(2885581..2886582) /locus_tag="lmo2800" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984411" CDS complement(2885581..2886582) /locus_tag="lmo2800" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="dehydrogenase" /protein_id="NP_466322.1" /db_xref="GeneID:984411" /translation="MTKQIKVGVIGVGQMGQYHAEIYQKLPQVELVAICEYNDERRAE MAEKFQCKAYKDYHELLANTEIEAVSIVLPDNMHRDCVEEAVKYKKHILLEKPLAKEL EDGKAMYELTKDYDKVFTVGFLLRFDPRFNMIKQRLDNGELGDIIHLYCRRNSPITGP KRYIGASDLSMHVMIHDIDYINWYMDSEPVKVIAKSRSVLLKEYGMNDVIYAIVTYEN GAIACLEACWVLPENSPTIIDDKLELVGTKGVAYVDSCDHGVRFVSEKGVSYPDSRHW YYTNGEVSGDLAEEVMAFINNVANNTKSIITPKEAYDSLRVVDAIERSIAEGKEVSL" misc_feature complement(2885584..2886579) /locus_tag="lmo2800" /note="Predicted dehydrogenase [General function prediction only]; Region: MviM; COG0673" /db_xref="CDD:440437" gene complement(2886584..2887297) /locus_tag="lmo2801" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986720" CDS complement(2886584..2887297) /locus_tag="lmo2801" /EC_number="5.1.3.9" /experiment="EXISTENCE:[PMID:19448609]" /note="Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate" /codon_start=1 /transl_table=11 /product="N-acetylmannosamine-6-phosphate 2-epimerase" /protein_id="NP_466323.1" /db_xref="GeneID:986720" /translation="MGNSVMEKIKGGLVVSCQALEDEPLHSAFIMSKMALAAVQGGAV GIRANTAKDIRAIQSEIDVPIIGIYKKDYDDSDVFITPTLKEVREICETGVEIVAMDA TTRKRPHNEDLKDILSAIRKEFPNTLFMADTASIEDVYYADSLGFDLIGTTLYGYTEE TANKNISDDDFSHLKEVLKSTKRPVIAEGKIDSPSKARQVLTLGCYAVVVGGAVTRPQ EITTRFTNEIQKIQEERGK" misc_feature complement(2886608..2887279) /locus_tag="lmo2801" /note="putative N-acetylmannosamine-6-phosphate 2-epimerase; Region: PRK01130" /db_xref="CDD:234907" misc_feature complement(order(2886665..2886667,2886728..2886736, 2886827..2886829,2886839..2886841,2886902..2886904, 2886995..2886997,2887088..2887090,2887094..2887096, 2887157..2887159,2887244..2887246,2887250..2887252)) /locus_tag="lmo2801" /note="putative active site cavity [active]" /db_xref="CDD:240080" regulatory complement(2886591..2886596) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2801" regulatory complement(2887305..2887310) /regulatory_class="ribosome_binding_site" regulatory complement(2887459..2887489) /regulatory_class="terminator" gene complement(2887499..2888215) /gene="gidB" /locus_tag="lmo2802" /db_xref="GeneID:986719" CDS complement(2887499..2888215) /gene="gidB" /locus_tag="lmo2802" /experiment="EXISTENCE:[PMID:19448609]" /note="glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA" /codon_start=1 /transl_table=11 /product="16S rRNA methyltransferase GidB" /protein_id="NP_466324.1" /db_xref="GeneID:986719" /translation="MNPEQFQMALAEKGIELSDDQMKQFHDYFEMLVEWNEKMNLTAI TDEKEVYLKHFYDSISAAFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLKVSIVDSL KKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCM PLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFSFSLPVEESERNIYVITKT KETPNKYPRKPGTPNKLPIE" misc_feature complement(2887553..2888212) /gene="gidB" /locus_tag="lmo2802" /note="16S rRNA G527 N7-methylase RsmG (former glucose-inhibited division protein B) [Translation, ribosomal structure and biogenesis]; Region: RsmG; COG0357" /db_xref="CDD:440126" regulatory complement(2888223..2888228) /regulatory_class="ribosome_binding_site" gene complement(2888368..2888634) /locus_tag="lmo2802a" /db_xref="GeneID:16695809" CDS complement(2888368..2888634) /locus_tag="lmo2802a" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_008475647.1" /db_xref="GeneID:16695809" /translation="MIDKLRADLLESRKSLEINLIWMFVARQTYAASENRKRMLKMMK RDKIEDIKSNCTSYIDGLSTTAKGKWVTKAKASFKENANKFDNC" gene complement(2888639..2889001) /locus_tag="lmo2803" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984778" CDS complement(2888639..2889001) /locus_tag="lmo2803" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2803" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466325.1" /db_xref="GeneID:984778" /translation="MDKQRQLLLKIENLEDDFNRKRRQLDEAMDEASQEKWRFHQELE NLSEQIRYIYQKRDYDASEDLPKAYHLISSIQEEGEWMVKNAVTHLENESEEHQTLYK KQVTAYEEELHQLKKERD" gene complement(2888994..2890277) /locus_tag="lmo2804" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986717" CDS complement(2888994..2890277) /locus_tag="lmo2804" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2804" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466326.1" /db_xref="GeneID:986717" /translation="MSQAITDQERVELAQKEYEDYKLKDKVKILKVNGNEQTIGIVSQ KINNKSTGEQSYIITDKYTPPTASISERNKVKEITILYKGSTAPANGNLNVPKHPDYK DVRKDWLSNDIPTAIQITNGGGSTVTPQLKTSAETLKQTMKLYPNAQIYVYGHSLGSM NAQYAIADLDKKDIKRISGGFFYQGPNIYSNLTPKQQDTVKAINALDRLFNFIDRKDY VPIGYGIGDPTIGHLIEVESKKAGMVEQHMWGGYQFDEDGNILTDKEGSLRLAKYATA QQLASINIMRTSFSKSGGALSSSEEIFLDAAEGLAITQGMKQTIQGEIKDLKDMFDKA IENAEELWRDTLSDARDIGSHLAESEILAALAWGGATEPEIVIDTVQDCEKSLIEATK IEQEYDKLLEQINEAIKSQLKTDQELAKQIGSMYG" regulatory complement(2889007..2889012) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2804" gene complement(2890274..2890666) /locus_tag="lmo2805" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986900" CDS complement(2890274..2890666) /locus_tag="lmo2805" /experiment="EXISTENCE:[PMID:19448609]" /note="hypothetical secreted protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466327.1" /db_xref="GeneID:986900" /translation="MKKRWIIVLGITVITIFGLGVKFYMDEEKLNKEMMNVVYSDEAK QVFEFRLKAADADAFTEKGVIQSYEIDQKSIKKNPMGGINVTLIINGNPELYIKYTMN NFNGELSGGASVTSGNLDKLLGDKEGEK" misc_feature complement(2890304..2890648) /locus_tag="lmo2805" /note="Protein of unknown function (DUF1310); Region: DUF1310; pfam07006" /db_xref="CDD:429243" regulatory complement(2890285..2890290) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2805" regulatory complement(2890674..2890679) /regulatory_class="ribosome_binding_site" gene complement(2890779..2891171) /locus_tag="lmo2806" /db_xref="GeneID:985133" CDS complement(2890779..2891171) /locus_tag="lmo2806" /experiment="EXISTENCE:[PMID:19448609]" /note="hypothetical secreted protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466328.1" /db_xref="GeneID:985133" /translation="MKKRWVIVLGITVMTIFGLGVKFYMDEEKLNTEMMNVVCSNEAK EVFNDDIKLIDTKAFTKEGLIQSYEVDKESIEPNPMGGIIVALVINKDSALKLTYTLK KNNEELKSGGASISKELTKQLGLLNGYK" misc_feature complement(2890809..2891153) /locus_tag="lmo2806" /note="Protein of unknown function (DUF1310); Region: DUF1310; pfam07006" /db_xref="CDD:429243" regulatory complement(2891179..2891184) /regulatory_class="ribosome_binding_site" gene complement(2891269..2891652) /locus_tag="lmo2807" /db_xref="GeneID:985340" CDS complement(2891269..2891652) /locus_tag="lmo2807" /experiment="EXISTENCE:[PMID:19448609]" /note="hypothetical secreted protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466329.1" /db_xref="GeneID:985340" /translation="MKKKWIIILGIVIIVIFAIGVKFYMDEKRLNEEMMNVIYSDEAK EAFDKDLKGMDSKAFTEEGKVHSYEIVRESIRRNPMGGINVELIINNDSEMGIEYTMD KFNGQLRCGGASISEKLAKLLGIWK" misc_feature complement(2891290..2891604) /locus_tag="lmo2807" /note="Protein of unknown function (DUF1310); Region: DUF1310; pfam07006" /db_xref="CDD:429243" gene complement(2891649..2892032) /locus_tag="lmo2808" /db_xref="GeneID:986698" CDS complement(2891649..2892032) /locus_tag="lmo2808" /experiment="EXISTENCE:[PMID:19448609]" /note="hypothetical secreted protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466330.1" /db_xref="GeneID:986698" /translation="MKKRWIVLFGIAIMIIFGLGIKFYMDEEKLNKEMIKVIYSDEAK QVFEKRLTNLDAKAFTKEGIIQSYKIDEGSIKSNPMGGIEVRLIINNNSELYASYTMS RNNGVLGGGGAIISKELARQTEVKD" misc_feature complement(2891670..2892014) /locus_tag="lmo2808" /note="Protein of unknown function (DUF1310); Region: DUF1310; pfam07006" /db_xref="CDD:429243" regulatory complement(2891660..2891665) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2808" regulatory complement(2892040..2892045) /regulatory_class="ribosome_binding_site" gene complement(2892057..2892437) /locus_tag="lmo2809" /db_xref="GeneID:986696" CDS complement(2892057..2892437) /locus_tag="lmo2809" /experiment="EXISTENCE:[PMID:19448609]" /note="hypothetical secreted protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466331.1" /db_xref="GeneID:986696" /translation="MKKRWIIATVVLVMIVAGLGVKFYMDEEKLNKEMINVVYSDEAK RVFENGLKNLDAEALTGKGVINTYEIDKKSIKQNPMGGINVTLHVNGDSELYVFFTLN KADDKKLIDDGGGNSAKLEKLLDN" misc_feature complement(2892072..2892419) /locus_tag="lmo2809" /note="Protein of unknown function (DUF1310); Region: DUF1310; pfam07006" /db_xref="CDD:429243" regulatory complement(2892445..2892450) /regulatory_class="ribosome_binding_site" gene complement(2892596..2894485) /gene="gidA" /locus_tag="lmo2810" /db_xref="GeneID:986685" CDS complement(2892596..2894485) /gene="gidA" /locus_tag="lmo2810" /experiment="EXISTENCE:[PMID:19448609]" /note="GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs" /codon_start=1 /transl_table=11 /product="tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA" /protein_id="NP_466332.1" /db_xref="GeneID:986685" /translation="MQTYDAGTFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMV AFMPCNPSVGGPAKGVVVREIDALGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQAD KWDYQHEMKHTIEKEENITLRQGLVDRLVIEDGVCKGVITNSGAIYYAKTVVITTGTF SRGEIIVGELRYSSGPNNQQPSVKLSEHLEELGFELRRFKTGTPPRVKSSTIDYSKTE EQPGDDHPRAFSFDTVEMLLDQLPCWLTYTNETTHEIIQANLHRSPMFTATKKGTGAR YCPSIEDKIVRFSDKPRHQIFLEPEGKNTEEVYVQGLSTSLPEEVQREMLRTIPGLEN VEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLFTAGQINGTSGYEEAAGQGLMAGINA ARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPYRLLTSRAEYRLLLRHDNADLRLT EIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIKPTAEVQAMLKEIGSGELKDGI LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQIKYEGYIQKSNLQVEKMKRME DKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRISGVNPADISILLVYIEQGKI AKISK" misc_feature complement(2892608..2894476) /gene="gidA" /locus_tag="lmo2810" /note="tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA [Translation, ribosomal structure and biogenesis]; Region: MnmG; COG0445" /db_xref="CDD:440214" regulatory complement(2894498..2894503) /regulatory_class="ribosome_binding_site" gene complement(2894510..2895883) /gene="trmE" /locus_tag="lmo2811" /gene_synonym="mnmE; thdF" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986680" CDS complement(2894510..2895883) /gene="trmE" /locus_tag="lmo2811" /gene_synonym="mnmE; thdF" /experiment="EXISTENCE:[PMID:19448609]" /note="in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE" /codon_start=1 /transl_table=11 /product="tRNA modification GTPase TrmE" /protein_id="NP_466333.1" /db_xref="GeneID:986680" /translation="MEFDTIAAISTPPGEGAIAIIRLSGPEAIQIADRIFYAKNSLSE AESHTIHYGHIKEDGEVIEEVMVTVMRAPRTFTREDVVEINAHGGIVSVNRVLQLLLR NGANLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMGVAIRQMDGNLSRLIRN LRQEILDALAQVEVNIDYPEYDDVEEMTQRMLLEKTELVRASVEQLLRTASQGKILRE GLATAIIGRPNVGKSSLLNQLIQEEKAIVTDIAGTTRDIIEEYVNVRGVPLRLIDTAG IRETEDIVEKIGVERSRKALADADFILLVLNQNEELTVEDEALFEAAAGHNYVVVLNK TDLETKLDIDRVRELAGENPIVSTSLVNDEGLEALEEAIKTLFFAGDIDAGDATYVSN VRHIALLHQALEALNGVTTGIQLGMPVDIVQIDMTRAWDLLGEITGDSVQDELLDQLF NQFCLGK" misc_feature complement(2894513..2895883) /gene="trmE" /locus_tag="lmo2811" /gene_synonym="mnmE; thdF" /note="tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE; Region: trmE; PRK05291" /db_xref="CDD:235392" misc_feature complement(2895185..2895208) /gene="trmE" /locus_tag="lmo2811" /gene_synonym="mnmE; thdF" /note="G1 box; other site" /db_xref="CDD:206727" misc_feature complement(order(2894801..2894809,2894876..2894878, 2894882..2894887,2895182..2895193,2895197..2895199)) /gene="trmE" /locus_tag="lmo2811" /gene_synonym="mnmE; thdF" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206727" misc_feature complement(2895113..2895163) /gene="trmE" /locus_tag="lmo2811" /gene_synonym="mnmE; thdF" /note="Switch I region; other site" /db_xref="CDD:206727" misc_feature complement(2895122..2895124) /gene="trmE" /locus_tag="lmo2811" /gene_synonym="mnmE; thdF" /note="G2 box; other site" /db_xref="CDD:206727" misc_feature complement(order(2894990..2895034,2895038..2895070)) /gene="trmE" /locus_tag="lmo2811" /gene_synonym="mnmE; thdF" /note="Switch II region; other site" /db_xref="CDD:206727" misc_feature complement(2895056..2895067) /gene="trmE" /locus_tag="lmo2811" /gene_synonym="mnmE; thdF" /note="G3 box; other site" /db_xref="CDD:206727" misc_feature complement(2894876..2894887) /gene="trmE" /locus_tag="lmo2811" /gene_synonym="mnmE; thdF" /note="G4 box; other site" /db_xref="CDD:206727" misc_feature complement(2894801..2894809) /gene="trmE" /locus_tag="lmo2811" /gene_synonym="mnmE; thdF" /note="G5 box; other site" /db_xref="CDD:206727" regulatory complement(2895892..2895897) /regulatory_class="ribosome_binding_site" regulatory 2896228..2896233 /regulatory_class="ribosome_binding_site" gene 2896241..2897059 /locus_tag="lmo2812" /db_xref="GeneID:986678" CDS 2896241..2897059 /locus_tag="lmo2812" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase" /protein_id="NP_466334.1" /db_xref="GeneID:986678" /translation="MKIHKLTWVLLIGLLLLSACSTEQPNLYLSANAAAVYSVENGEA LYEQNADKVMPIASLSKLMTAFLVLEAVDNNELSWDEKLDLVRLDDPSAVSLYAITQK RTWSVRDLYSAMLTMSANDAAETLGDRLDGADFPKEMNNQAKKLGMSSKTTFVSASGL DVDGKSAVSTTKDLFLLSSKLISTHPEVLETTSKPTVTTDKGAKLESTNDLLGSIQGL DGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLMEVGFKED" misc_feature 2896292..2897056 /locus_tag="lmo2812" /note="D-alanyl-D-alanine carboxypeptidase [Cell wall/membrane/envelope biogenesis]; Region: DacC; COG1686" /db_xref="CDD:441292" regulatory 2897072..2897107 /regulatory_class="terminator" gene complement(2897116..2897823) /locus_tag="lmo2813" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986694" CDS complement(2897116..2897823) /locus_tag="lmo2813" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2813" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466335.1" /db_xref="GeneID:986694" /translation="MTENTTIAKRILQFNEALANCSFDLPEGYRTVNPYSGDQSELVQ KITMAFYQKYYNDTKPRRIILGSSPARRGSAVTGVPFEDAKHIQNETGIFIDKFFINQ SSSDFLYDVMTEYGGCKPFYTDFYMNFVCPLGIVRTNAKGNEVNCNYYENKKLQATLK PFILESIRSQIDFGIDTSVCYCIGSGDNFDFVSKINKEHHFFDTIIPLEHPRFIMQYN SKNKDVYMEKYLSALKS" misc_feature complement(2897128..2897808) /locus_tag="lmo2813" /note="Domain of unknown function (DUF4918); Region: DUF4918; pfam16265" /db_xref="CDD:406630" misc_feature complement(order(2897194..2897196,2897437..2897439, 2897518..2897520,2897581..2897586,2897614..2897628)) /locus_tag="lmo2813" /note="active site" /db_xref="CDD:381690" misc_feature complement(2897614..2897628) /locus_tag="lmo2813" /note="motif A [structural motif]; Region: motif A" /db_xref="CDD:381690" misc_feature complement(2897614..2897616) /locus_tag="lmo2813" /note="substrate specificity residue; other site" /db_xref="CDD:381690" misc_feature complement(order(2897182..2897184,2897188..2897190, 2897194..2897196,2897263..2897268,2897272..2897274, 2897362..2897364)) /locus_tag="lmo2813" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:381690" regulatory complement(2897833..2897838) /regulatory_class="ribosome_binding_site" gene complement(2897847..2898374) /locus_tag="lmo2814" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986681" CDS complement(2897847..2898374) /locus_tag="lmo2814" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="NP_466336.1" /db_xref="GeneID:986681" /translation="MARLSQEIILNMAEKIIYEKGMEKTTLYDIASNLNVTHAALYKH YRNKEDLFQKLALRWLEETSREIFAWTQDAGQTPDDALHDWLWLLADTKKKRYKTDRK MFLLYTDYIEQNEELVKNHVAHLAQKAEEVSGRTNQGNAIITAFTYFHNPYFASRWEQ AGYVDLFEDVWQIVK" misc_feature complement(2897958..2898350) /locus_tag="lmo2814" /note="DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA [Transcription]; Region: AcrR; COG1309" /db_xref="CDD:440920" regulatory complement(2898382..2898387) /regulatory_class="ribosome_binding_site" regulatory 2898520..2898525 /regulatory_class="ribosome_binding_site" gene 2898535..2899266 /gene="fabG" /locus_tag="lmo2815" /db_xref="GeneID:984831" CDS 2898535..2899266 /gene="fabG" /locus_tag="lmo2815" /EC_number="1.1.1.100" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis" /codon_start=1 /transl_table=11 /product="3-ketoacyl-ACP reductase" /protein_id="NP_466337.1" /db_xref="GeneID:984831" /translation="MTNKRVAFILGGSGGIGKAVVQKLVEQNFAVAVHYAGNKAKAET LVENIVKSGGEAISVGGDVADEAQMIRAFDFIESQFGGIDVVINTAGIMKLSPIATLD MDDFDLIQRTNVRGTFVVSKQAALRVRNGGAIINFSTSVTRTSFPTYGAYVASKAGVE SLTLILARELRGKDITVNAVAPGPTATPLFLTGKDDKTIDNLAKATPLERLGQPEDIA ETVAFLAGPARWVNGQVIFTNGGLA" misc_feature 2898535..2899263 /gene="fabG" /locus_tag="lmo2815" /note="short chain dehydrogenase; Provisional; Region: PRK12937" /db_xref="CDD:171821" regulatory complement(2899264..2899305) /regulatory_class="terminator" regulatory 2899275..2899316 /regulatory_class="terminator" gene complement(2899313..2900506) /locus_tag="lmo2816" /db_xref="GeneID:985339" CDS complement(2899313..2900506) /locus_tag="lmo2816" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MFS transporter" /protein_id="NP_466338.1" /db_xref="GeneID:985339" /translation="MNQVKGERHSLIVLLVLFIGYTSVYVDKYTIGISLVTVSQDLGF DPSQKGLILSAFFLGYTLFQIPMGYLNNRIGARPVLAISIIIVGLFLVIFGFGYSLLF LVVIRFLSGALGHAGYPPSVSNYISLHIPLNKRGFAQSAMLASSGFAAFIGPLLIAQL LLSVGWRNTYYWIGFAVILIGFLILIVVPKAPKIDLNTQKEKIKVPFSELLKDKQLWI LLLSALFINAANYGLTSWLASYLNEVRGISISEVSYISSLAGLCILIAGVVGGYFISR FFKGKEPIIIFVFCVLGAFAVYGVYLFEQLALSVICLCLCNIFLIMAFTTLMGLPHKL FQQSHIATKYAAINSGGVLGGFFAPMIIGDLVNATNSYQSAFLFLALTLLVSGLIVLA IKKDQ" misc_feature complement(2899328..2900479) /locus_tag="lmo2816" /note="Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; Region: MFS_ExuT_GudP_like; cd17319" /db_xref="CDD:340877" misc_feature complement(order(2899442..2899444,2899451..2899456, 2899463..2899468,2899475..2899477,2899523..2899525, 2899535..2899537,2899547..2899552,2899706..2899708, 2899718..2899720,2899802..2899804,2899811..2899819, 2899826..2899831,2899838..2899840,2900057..2900059, 2900066..2900071,2900078..2900080,2900138..2900140, 2900147..2900155,2900159..2900164,2900315..2900317, 2900411..2900413,2900420..2900425,2900432..2900437)) /locus_tag="lmo2816" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340877" regulatory complement(2900515..2900520) /regulatory_class="ribosome_binding_site" gene complement(2900594..2901784) /locus_tag="lmo2817" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984784" CDS complement(2900594..2901784) /locus_tag="lmo2817" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="peptidase" /protein_id="NP_466339.1" /db_xref="GeneID:984784" /translation="MRTQLMNMLQERKDEITQIRRHLHEHPELSFHETETANFIQDFY KGKDVEVATEVGNGHAVVVTIKGEKPGKTIALRADFDALPIEEQTELPFKSKNPGVMH ACGHDGHTAYLLVLADCLIQLKENIPGTIKIVHQHAEETPPGGAKSVVESGILDDVDQ IFGIHVFPFGESGQVYYHSGYAMAGRTYFKLKIQGVGGHGSSPHMANDAIVAGAYFVT AIQTVVSRRLNPFDTGVITIGSFDGKGSFNVIKDAVELEGDVRYMNTENRDKMDAEIH RIVAGMEAMFSVTVELTYTNDYPPLYNDPAVTEQVVASLQKGVGEYLTGISEYDMLSG SEDFAYYLQKIPGVFFYIGAKPKNTSIAYFNHHPKFDIDEDALLVAAKSVADVVLDYY KLNG" misc_feature complement(2900612..2901772) /locus_tag="lmo2817" /note="Zinc peptidases M18, M20, M28, and M42; Region: Zinc_peptidase_like; cl14876" /db_xref="CDD:472712" regulatory complement(2901796..2901801) /regulatory_class="ribosome_binding_site" gene complement(2901800..2903200) /locus_tag="lmo2818" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984714" CDS complement(2901800..2903200) /locus_tag="lmo2818" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MFS transporter" /protein_id="NP_466340.1" /db_xref="GeneID:984714" /translation="MTSTAYKGTNKLIVGIVFGVITFWLFAQSMVNIVPAVQSDLGIS SDLLSIAISLTALFSGIFIVVAGGMADKFGRVKLTYIGLILSIIGSLLLVVTQGSTLL IIGRIIQGLSAACIMPATLALMKTYFDGADRQRALSYWSIGSWGGSGICSFAGGAIAT YMGWRWIFIISIVFALLGMLLIKGTPESKVVQNTKAKFDSFGLVLFVIAMVCLNLIIT RGATFGWTSPITITMLVVFLVSAGLFFRVELRQANGFIDFSLFKNKAYTGATLSNFLL NAAAGTLVVANTYVQIGRGFTAFQSGLLSIGYLVCVLGMIRIGEKILQRVGARKPMIL GSGITAVGIALMALTFIPGTLYTVLVFIGFALFGIGLGMYATPSTDTAISNAPEDKVG VASGIYKMASSLGGSFGVAISATIYGVIALSGNIDLAAMVGLLTNVGFCVVSLISVAI TTPSAKKALELKAAKE" misc_feature complement(2901947..2903155) /locus_tag="lmo2818" /note="Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_MMR_MDR_like; cd17321" /db_xref="CDD:340879" misc_feature complement(order(2901983..2901985,2901992..2901997, 2902004..2902009,2902016..2902018,2902064..2902066, 2902076..2902078,2902088..2902093,2902253..2902255, 2902265..2902267,2902346..2902348,2902355..2902363, 2902370..2902375,2902382..2902384,2902757..2902759, 2902766..2902771,2902778..2902780,2902838..2902840, 2902847..2902855,2902859..2902864,2903012..2903014, 2903108..2903110,2903117..2903122,2903129..2903134)) /locus_tag="lmo2818" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340879" gene complement(2903200..2904402) /locus_tag="lmo2819" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986663" CDS complement(2903200..2904402) /locus_tag="lmo2819" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="carboxypeptidase" /protein_id="NP_466341.1" /db_xref="GeneID:986663" /translation="MEVWTMKEKLFQKLDEKRDRMIEIRRYLHEHPELSFQEENTAKY IADFYKEMDCDVRTHVGGNGVVVTIDTGKPGKTLAIRADFDALPIQEETGLAFASKNP GVMHACGHDGHTAYMLILGETLIEMKQELTGKLVILHQHAEETPPGGAIQMIQDGALD GVDNVLGIHVMSTMKTGEVFYREGAIQTGRSYFKLKVQGQGGHGSSPHLANDAIVAAS EFVVAVQTVISRRLNPFDVGSITIGSFDGKGSFNVIKDAVELEGDVRSMSEEARNIIQ KEITRIVSGIEAMFGVTCELDYKNDYPVLNNDEALTDFVVKSIKGAKIPEITDVVRCE PQPPSEDFAYYAKERPSSFFYVGAMPADGHFYPHHHPKFDINEDALLIASKAMGACVV DYLKGENN" misc_feature complement(2903221..2904375) /locus_tag="lmo2819" /note="M20 Peptidase aminoacylase 1 subfamily, includes Bacillus subtilis YhaA and Staphylococcus aureus amidohydrolase, SACOL0085; Region: M20_Acy1_YhaA-like; cd08021" /db_xref="CDD:349941" misc_feature complement(order(2903395..2903400,2903407..2903409, 2903533..2903538,2903545..2903553,2903557..2903562, 2903608..2903610,2903614..2903622,2903638..2903697, 2903701..2903721,2903725..2903730,2903734..2903742, 2903746..2903751,2903758..2903763,2903767..2903775, 2903779..2903784,2903788..2903796,2903821..2903829, 2903839..2903841)) /locus_tag="lmo2819" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:349941" regulatory complement(2903210..2903215) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2819" regulatory complement(2904411..2904416) /regulatory_class="ribosome_binding_site" regulatory complement(2904573..2904593) /regulatory_class="terminator" gene complement(2904598..2906940) /locus_tag="lmo2820" /db_xref="GeneID:986657" CDS complement(2904598..2906940) /locus_tag="lmo2820" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="amino-terminal domain-containing protein" /protein_id="NP_466342.1" /db_xref="GeneID:986657" /translation="MSHLKDYTIGIQHIKQLTSEISLGTKLVFAISGQITIKDSEQKF YLQEGDILVLDRNTFYTIEGNEANLFINLTISDTFFAHYYEDYFQHSFKFFSKESDPG RERVVGSLRKSVSELLIASATKKRANKLEAQSALFQILLLLTRFLKKGVPSSARKEVN DKRISRIIREVEERFDEALSLRVFAQKEFLSEAYLSRYFKKTTGLGFLQYLTEVRLKH AIQDLLHSAESITEIALKNGFSSQKHFSEVFKFHFELTPSEYRAEHHAETNLLIDNKA SELGASIEQIVPSPEILVNLSRLYHDVEPGKELNKAPFEKKKIDITEKTARCLSENMN ILTIGELKEVLKANVQKQIITTRDEIGINYIGIRHLFRGSTFLPETETDELVPTSSPY ANADLALTFLKQQNLELFIRIEYQDIVGDVAAVFERLDHFLKHCMQVFGREFVSKWHF MFFEPKNTYADKEELKKLYLKIYHIIKSRFPAIQVGNFVPFSLSKNEVPERHMWFLDV ADKIDFVAYNANQNEAVDFSKEDMKSFMISEDYCLSKTRKLKDFLKHHHINKPLMLVN WNTLTGNTRYTNGTFFRGALVLKTMLDLAPEVDALGFWINTELHEGDDSQLNISLDGI EMFHFFDGKRPAFYAVKFLRRLKGVVVAEGADFIMTKHTDGYQLILMNCANINPRYSV EERFTKEEQKELHIRITGLQAGEYQVCKWQFDRDNGALYSKYWQLNSKYGLDKEILDY IVDASQPTLTVSDETITEDWSFYAYLDINAIHFYEFRSTI" misc_feature complement(2906140..>2906667) /locus_tag="lmo2820" /note="HTH-type transcriptional activator RhaS; Region: PRK13503" /db_xref="CDD:184094" misc_feature complement(2906158..2906406) /locus_tag="lmo2820" /note="helix_turn_helix, arabinose operon control protein; Region: HTH_ARAC; smart00342" /db_xref="CDD:197666" misc_feature complement(2904664..>2905647) /locus_tag="lmo2820" /note="Beta-xylosidase [Carbohydrate transport and metabolism]; Region: XynB; COG3664" /db_xref="CDD:442881" regulatory complement(2906948..2906953) /regulatory_class="ribosome_binding_site" gene 2907153..2909708 /locus_tag="lmo2821" /db_xref="GeneID:984504" CDS 2907153..2909708 /locus_tag="lmo2821" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="internalin" /protein_id="NP_466343.1" /db_xref="GeneID:984504" /translation="MKTTKIVIASLVSLTMVSNPLLTFAATNDVIDNTTEITTDKETS STQPTIKNTLKAGQTQSFNDWFPDDNFASEVAAAFEMQATDTISEEQLATLTSLDCHN SSITDMTGIEKLTGLTKLICTSNNITTLDLSQNTNLTYLACDSNKLTNLDVTPLTKLT YLNCDTNKLTKLDVSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLDVT PQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLT EIDVTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAE GCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTELDVSHNTKL KSLSCVNAHIQDFSSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLLDQFG NPMNIEPGDGGVYDQATNTITWENLSTDNPAVTYTFTSENGAIVGTVTTPFEAPQPIK GEDVTVHYLDDKGEKLADDEVLSGNLDDPYTSSAKDIPDYTLTTTPDNATGTFTTTSQ SVTYVYTKNIVAAEPVTVNYVDDTGKTLSPSEILNGNVGDTYNATAKQIDGYTLSAEP TNATGQFTSSAQTVNYIYTKNPAPEKGVVEIHYVDEDNKQLNSTTEISGTIGDNYTTE PKTIEGYTLTTTPGNATGTFTTGSQTVTYVYTKNIEAAEPITVNYVDANGKTLAPSET LNGNVGDTYKATAKQIDGYTLSAEPTNATGQFTSSAQTVNYIYTKNTNTDQPLPTKKP TNTTPTKPSNLKTTEVKKASDTLPKTGDSAPWKSALLGVFLSSTALVIWKKKK" misc_feature 2907153..2909705 /locus_tag="lmo2821" /note="class 1 internalin InlJ; Region: internalin_J; NF033187" /db_xref="CDD:380191" misc_feature 2907435..2907500 /locus_tag="lmo2821" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2907501..2907563 /locus_tag="lmo2821" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2907564..2907626 /locus_tag="lmo2821" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2907627..2907689 /locus_tag="lmo2821" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2907690..2907752 /locus_tag="lmo2821" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2907753..2907818 /locus_tag="lmo2821" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2907819..2907881 /locus_tag="lmo2821" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2907882..2907944 /locus_tag="lmo2821" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2907945..2908007 /locus_tag="lmo2821" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2908008..2908073 /locus_tag="lmo2821" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2908080..2908166 /locus_tag="lmo2821" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 2908194..2908262 /locus_tag="lmo2821" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" regulatory complement(2909705..2909743) /regulatory_class="terminator" gene complement(2909753..2910076) /locus_tag="lmo2822" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986651" CDS complement(2909753..2910076) /locus_tag="lmo2822" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2822" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466344.1" /db_xref="GeneID:986651" /translation="MKQISYFYSAENESEINLEIWKMFMNQSEAERKIHFDHTGIVFD IQLGEVGKVDLPERIQMLIDKNGMEALPILVVDDAVYNYGEFSVIDAVEELLDVGVSI QVEED" gene complement(2910085..2911326) /locus_tag="lmo2823" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986643" CDS complement(2910085..2911326) /locus_tag="lmo2823" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sporulation protein SpoOJ" /protein_id="NP_466345.1" /db_xref="GeneID:986643" /translation="MVNIRPFKAIRPIKNLAEKVASLPYDVLNSEEARELGDANKYSF LHIDKAEIDLDPAVSPYDPAVYQKAADNLEQFELDGWLGREANPAFYIYQLTMDGRPQ TGLVVCTSIDDYTNGKIKKHELTREEKELDRIRHVDVCDANTSPIFLTYRGKEAINAL VESWVNENEPEYDFESFHGVAHKVWAITDAHILEDLSAAFSEVPALYIADGHHRTESA VKVGLKRREEFPDAGPEAEFNFFLSVVFPEEQLEILDYNRVVNVPIEVDFLSKVETSF DVEKVGKEAFKPEKPKQVGMYLDGNWYKLTAKSEVIPNDVIGQLDVSILQSQILTPIF GIEDIRRDNRIDFVGGIRGLEELTRLVDNGSHSVAFAMYPPTMDDLLGVADAAEIMPP KSTWFEPKLLSGLFVHDLESK" misc_feature complement(2910094..2911326) /locus_tag="lmo2823" /note="Uncharacterized conserved protein, DUF1015 family [Function unknown]; Region: COG4198" /db_xref="CDD:443352" regulatory complement(2910085..2910090) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2823" regulatory complement(2911333..2911338) /regulatory_class="ribosome_binding_site" gene complement(2911415..2912602) /locus_tag="lmo2824" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984944" CDS complement(2911415..2912602) /locus_tag="lmo2824" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="D-3-phosphoglycerate dehydrogenase" /protein_id="NP_466346.1" /db_xref="GeneID:984944" /translation="MFNIQTFNAIAKEGLKTFDLEKYVIDANQPADGILLRSYNLHDF DFPETVKAVARAGAGVNNIPVENCSEKGIVVFNTPGANANAVKELVLASLFVSARPIL EGTEWVKELPAEDDVEQKVEAGKKAFAGTELAGKKLGIIGLGAIGALVANDALSLGMD VVGYDPFVSVDTAWRISKEVERAMTIEEVLATCDYLTVHVPLTDKTRGMFNADTLQLV KDNAVLLNFSRGELVDSASVKEALDDGLLRLYITDFATKELLNHKKVHVFPHLGASTE EAETNCAKMAAKELQSYLETGSIKNSVNFPNVEMPYNGHPRIGICHKNIPNMVGQITT ELGKYSLNILDMINRSKNEYAYTLIDIDKETQANLEQLKQDLLAVQGVLRVRVIEPLG VTV" misc_feature complement(2911691..2912599) /locus_tag="lmo2824" /note="Putative D-3-Phosphoglycerate Dehydrogenases, NAD-binding and catalytic domains; Region: PGDH_like_3; cd12174" /db_xref="CDD:240651" misc_feature complement(order(2911793..2911795,2911916..2911918, 2912357..2912359,2912426..2912434,2912489..2912491)) /locus_tag="lmo2824" /note="putative ligand binding site [chemical binding]; other site" /db_xref="CDD:240651" misc_feature complement(order(2911784..2911789,2911793..2911795, 2911844..2911849,2911916..2911924,2911985..2911987, 2912000..2912008,2912105..2912113,2912165..2912179, 2912345..2912347,2912357..2912359,2912429..2912431)) /locus_tag="lmo2824" /note="putative NAD binding site [chemical binding]; other site" /db_xref="CDD:240651" misc_feature complement(2911439..2911654) /locus_tag="lmo2824" /note="C-terminal ACT (regulatory) domain of D-3-Phosphoglycerate Dehydrogenase (3PGDH) found in fungi and bacteria; Region: ACT_3PGDH; cd04901" /db_xref="CDD:153173" misc_feature complement(order(2911577..2911579,2911631..2911633, 2911637..2911639)) /locus_tag="lmo2824" /note="L-serine binding site [chemical binding]; other site" /db_xref="CDD:153173" misc_feature complement(order(2911553..2911573,2911577..2911579, 2911604..2911606,2911613..2911618,2911625..2911627, 2911631..2911633)) /locus_tag="lmo2824" /note="ACT domain interface [active]" /db_xref="CDD:153173" gene complement(2912595..2913686) /gene="serC" /locus_tag="lmo2825" /db_xref="GeneID:986637" CDS complement(2912595..2913686) /gene="serC" /locus_tag="lmo2825" /EC_number="2.6.1.52" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine" /codon_start=1 /transl_table=11 /product="phosphoserine aminotransferase" /protein_id="NP_466347.1" /db_xref="GeneID:986637" /translation="MERVYNFSAGPAVLPVPVLEKVQRELLSYNGSGMSVMELSHRSE LFQNILDDAESLIRELMEIPDNYKVLFLQGGASLQFDMVPMNLANGKKAAYVNTGSWA KKAISEAKKIQGVEVEVIASSEDRNFSYIPEIPTVSSDVAYLHVTTNNTIEGTAMFDV PDSAVPVVADMSSNILSSVYDVKKFGLIYAGAQKNIGPAGLTLVIVREDLIGQVEGLP SMLDFKVQAENDSMYNTPPTFAIYVAKLVFEWIKEQGGVAGIEALNRKKAALLYDYID QSDFFSSPVEPSARSLTNVPFVTNSAEFDKAFVKEAEANGFENLKGHRSVGGMRASLY NAFPIEGVEALIAFMEKFANARKGGEVRV" misc_feature complement(2912625..2913686) /gene="serC" /locus_tag="lmo2825" /note="3-phosphoserine/phosphohydroxythreonine transaminase; Region: PRK05355" /db_xref="CDD:235428" misc_feature complement(order(2913105..2913107,2913114..2913116, 2913168..2913170,2913177..2913179,2913246..2913248, 2913447..2913449,2913456..2913461)) /gene="serC" /locus_tag="lmo2825" /note="pyridoxal 5'-phosphate binding pocket [chemical binding]; other site" /db_xref="CDD:99736" misc_feature complement(2913105..2913107) /gene="serC" /locus_tag="lmo2825" /note="catalytic residue [active]" /db_xref="CDD:99736" regulatory complement(2912611..2912616) /regulatory_class="ribosome_binding_site" /gene="serC" /locus_tag="lmo2825" regulatory complement(2913695..2913700) /regulatory_class="ribosome_binding_site" regulatory complement(2913991..2914021) /regulatory_class="terminator" gene complement(2914057..2915205) /locus_tag="lmo2826" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:985480" CDS complement(2914057..2915205) /locus_tag="lmo2826" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MFS transporter" /protein_id="NP_466348.1" /db_xref="GeneID:985480" /translation="MENKTRLWTKDYVFLLLGSVLLYIGFMVFMPTLPARIIELGGTQ MQASLAVGLFSIVALLMRAIAGSWNDKFGPKVLIIVGFLILILTTVNFYWSTAVAALL ILRLFHGAGWGIGTTSIATGVSKLVPPSRTGEGIGFYGLTTALGMSLAPIIAILIMNY FSFDVLVTFSLVLMVFILILMTQVKIPKSEKIVHQKMKLFEKTALLPAGLCLLMAIPL GGIQTFMMVYGTELGISTTWIYFIGQAIMVLVSRLFAGRLYDTKGHRFVIIPGALSMI IGILILSFATGAISLFIASLFFGLGYGMSQPALQALAVDRAAPHNKGTANGTFLSGMD IGMAVGSFGLSIVATYYNYAIMYRTAIIALVVFFAVYWFTLGRKVKNS" misc_feature complement(2914081..2915163) /locus_tag="lmo2826" /note="Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; Region: MFS_YfcJ_like; cd17489" /db_xref="CDD:341042" misc_feature complement(order(2914195..2914197,2914204..2914209, 2914216..2914221,2914228..2914230,2914276..2914278, 2914288..2914290,2914300..2914305,2914450..2914452, 2914462..2914464,2914537..2914539,2914546..2914554, 2914561..2914566,2914573..2914575,2914765..2914767, 2914774..2914779,2914786..2914788,2914846..2914848, 2914855..2914863,2914867..2914872,2915020..2915022, 2915116..2915118,2915125..2915130,2915137..2915142)) /locus_tag="lmo2826" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:341042" regulatory complement(2915214..2915219) /regulatory_class="ribosome_binding_site" gene complement(2915219..2915641) /locus_tag="lmo2827" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986629" CDS complement(2915219..2915641) /locus_tag="lmo2827" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="NP_466349.1" /db_xref="GeneID:986629" /translation="MRGYYDEISFDVNTTAKKMHLFLLRSIASYDVTPEQWSVLEGIE ANEPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTEKGRKET NELRDIVEVSCEKMFAGVERADLEQFTAILKNISTNIE" misc_feature complement(2915228..2915626) /locus_tag="lmo2827" /note="DNA-binding transcriptional regulator, MarR family [Transcription]; Region: MarR; COG1846" /db_xref="CDD:441451" regulatory complement(2915648..2915653) /regulatory_class="ribosome_binding_site" gene complement(2915744..2916097) /locus_tag="lmo2828" /db_xref="GeneID:986627" CDS complement(2915744..2916097) /locus_tag="lmo2828" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2828" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466350.1" /db_xref="GeneID:986627" /translation="MVTAIQKEQVRTAKNAAFLTSRPEVDYLERESFFITLKDAMKRE WVVRLSYFQEADVSSLRLASFEYPYAFLGLGELEKQDLVPLEIDMLTEEVIFKDIVGY EYVIEFRDIIDVELL" regulatory complement(2916106..2916111) /regulatory_class="ribosome_binding_site" regulatory 2916276..2916281 /regulatory_class="ribosome_binding_site" gene 2916291..2916890 /locus_tag="lmo2829" /db_xref="GeneID:986896" CDS 2916291..2916890 /locus_tag="lmo2829" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="nitroreductase" /protein_id="NP_466351.1" /db_xref="GeneID:986896" /translation="MTNTFLDSIKVRRSIYALDKNVSVEDSKIEEIIKDAVKYSPSSF NSQSSRAVILLGENHDKLWSIVEDTLRAIVPAENFAATEEKVGSFRAGYGTVLFFEDT AVIEGLQENFALYADNFPVWSEQSSGIAQHSVWVALANAGIGASLQHYNPLIDDAVKA EWNIPASWNLRAQMPFGNIVQEAGEKEFIDDADRFRVFK" misc_feature 2916300..2916887 /locus_tag="lmo2829" /note="Fatty acid repression mutant protein (predicted oxidoreductase) [General function prediction only]; Region: FMR2; COG3560" /db_xref="CDD:442781" regulatory complement(2916903..2916941) /regulatory_class="terminator" regulatory 2916915..2916953 /regulatory_class="terminator" gene complement(2916946..2917266) /locus_tag="lmo2830" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:984904" CDS complement(2916946..2917266) /locus_tag="lmo2830" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="NP_466352.1" /db_xref="GeneID:984904" /translation="MAIIFAKEDDLEEIISSHPKILLNFWAEWCAPCRCFWPTLEQFA EMEEGNVQVVKINVDKQRALAQKFDVKGIPNSLVLVDGEIKGAIAGIVSCDELRSRFK SLAK" misc_feature complement(2916955..2917233) /locus_tag="lmo2830" /note="Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family [Posttranslational modification, protein turnover, chaperones]; Region: CnoX; COG3118" /db_xref="CDD:442352" regulatory complement(2917273..2917278) /regulatory_class="ribosome_binding_site" gene complement(2917389..2918051) /locus_tag="lmo2831" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986616" CDS complement(2917389..2918051) /locus_tag="lmo2831" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="phosphoglucomutase" /protein_id="NP_466353.1" /db_xref="GeneID:986616" /translation="MTTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIEFDEAFNE NLKGVSRIDSLLLILRKDGRENDFTEEQIEALAADKNDFYVSLLKEITPADVLPGIKE LIVDLKKQNLKCAIASVSKNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACR GLGLETSEVVGIEDAQAGIEAINAAGIVSVGVGSGLRDADMTVKSTGLLDLRILEILH SK" misc_feature complement(2917473..2918033) /locus_tag="lmo2831" /note="beta-phosphoglucomutase; Region: bPGM; TIGR01990" /db_xref="CDD:213672" gene complement(2918048..2919169) /locus_tag="lmo2832" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986509" CDS complement(2918048..2919169) /locus_tag="lmo2832" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466354.1" /db_xref="GeneID:986509" /translation="MKIVIAPDSFKESLTAHEVAEYIKEGFQEIYPDADYHLLPVSDG GEGTLEILSKALDAKKMKIDVSGPFSEPVSAQVAFTEGNKKALIEMAEVCGLHLVPTT RRDPLQVSTKGVGELILHAMKKGATEIIIGIGGSASNDGGIGMASALGYEFLDAENNI VNPIGVNLADIATIRSEKVPAELENITVNIVTDVENPLCGEAGASYVFGPQKGLATTD LATADEAMRHFYQLANPAMVTMPRAGAGGGIGAGLVTFAKANLLSGIDFVIEALQIKT ICEDADLVIVGEGKMDGQTAQGKAPVGVAKVVPKETPVFAICGSVGEGLEAVYEVGIS AVFPSIAKPASLESILKETPNNLRRTARNVAAVWKGRVE" misc_feature complement(2918063..2919166) /locus_tag="lmo2832" /note="Glycerate kinase [Carbohydrate transport and metabolism]; Region: GlxK; COG1929" /db_xref="CDD:441532" regulatory complement(2918058..2918063) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2832" gene complement(2919166..2921343) /locus_tag="lmo2833" /db_xref="GeneID:986609" CDS complement(2919166..2921343) /locus_tag="lmo2833" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="maltose phosphorylase" /protein_id="NP_466355.1" /db_xref="GeneID:986609" /translation="MRKIIEKEFSLNYLNKYGSQMTVGNGYLGVRGALEEEYPEQVRG MYVAGIYNRPSGSMSSELVNLPDVTRFQVLLDGETFSMQAGKIHAYERYLDMHTGELV RKITWESSAGKKYQLNFYRFVSKATKHVIAAKVEIMPLSGGAKVKVKTGIDAQQTNFG TQQLAESSLRIFDEKLMVGEYETIESKQHITIATKVNKKGIFTAKNRQLMTEVEQEIA ENQLFTLEKISMVKTSLDQVDAELPNTTYAELKRASETLWADFWEHAGVRVESTNDFD QFALDFACYHLEIMTPKDDFRCSVGAKGLTGEGYKGHVFWDTEIFIMPFFLYNKPEIA KQLLKYRYLHLKEAKEKATKNGYNGALFPWESAFSGDEETPEFAAINIRTGTRQKVAS AISEHHLVADIAYAVCEYEAATKDAQFMKECGSELLLETAEFWLSRATNRNGRLEILD VIGPDEYTEHIDNNTYTNYMAHYNVEKALAWNKDNADFVARAEAFLEKIYLPVANESG LIPQDDTFLEKDWINLDKYKAAQGTQGILLDYSRQEVNELQILKQADLVMLFYLFPKM FAPDAVKQNLDYYEKRTIHDSSLSKAIHAIVENRTGNRAQAYQFFQEACLIDLGSEPH SSDDGLHAASLGAIWLAVVFGFVGIDTSGELLEIAPNLPGEWQSVVFEFSWKGEKILV EIAPNTLQLSKSTKSVLELVIYGEKHQLTDTITIKLDQKDVSL" misc_feature complement(2919187..2921337) /locus_tag="lmo2833" /note="Kojibiose phosphorylase YcjT [Carbohydrate transport and metabolism]; Region: ATH1; COG1554" /db_xref="CDD:441163" regulatory complement(2919180..2919185) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2833" gene complement(2921340..2922371) /locus_tag="lmo2834" /db_xref="GeneID:986600" CDS complement(2921340..2922371) /locus_tag="lmo2834" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_466356.1" /db_xref="GeneID:986600" /translation="MKKRVAIIGAGQVAEKVHAAYYKTRNELELVAVCDPSLERGEEF RANNGFEKHYATAEEMFAAEKIDIVSICTPNRFHFDNVMLSLANGAAVMCEKPPAMSA AEAKAMWELAEEKGAILSYDFHHRFSSEAQFLKRNSALLGEIYCVKATALRRSGVPGW GTFTNKEMQGGGPLIDMGIHMLDAAMFVLGFPKVKKVTAKSFQKIGTKKSAGTFGSWD PEKYTVEDSLFGFIELENGGLIELDTSFALHIKPESALNVDFFGDLAGGSLYPAEIYT DNAGEFQLLEKLGQLDENKHENSMKAFVDSVLGAGKVELAGAKQGYIIQKIVESLYES AEKGESVSL" misc_feature complement(2921343..2922371) /locus_tag="lmo2834" /note="Predicted dehydrogenase [General function prediction only]; Region: MviM; COG0673" /db_xref="CDD:440437" regulatory complement(2921351..2921357) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2834" regulatory complement(2922380..2922385) /regulatory_class="ribosome_binding_site" gene complement(2922429..2923223) /locus_tag="lmo2835" /db_xref="GeneID:986592" CDS complement(2922429..2923223) /locus_tag="lmo2835" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="xylose isomerase" /protein_id="NP_466357.1" /db_xref="GeneID:986592" /translation="MKLGTQNQAFFPENIEEKFAYVKEMGFEGFEIDGKLLVENLDEV KKAIEKTGLPVSTACGGYDGWIGDFIEERRLNGLEEIKAILEALAEVGGQGIVVPAAW GMFTYRLPPMASPRSQAGDFKAVSESLVYLDKIAGETGTKVYLEPLNRYQDHMINLLS DAQKYIDENNLKNVEIIADFYHMNIEEDSIPAALETYKDSIGHIHVADNHRYQPGSGS LDFKTSFDQLKKNGYNGFLTFECRVRSENPEQAYKDALAHLKSCLI" misc_feature complement(2922435..2923223) /locus_tag="lmo2835" /note="Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism]; Region: YcjR; COG1082" /db_xref="CDD:440699" regulatory complement(2923231..2923236) /regulatory_class="ribosome_binding_site" gene complement(2923236..2924288) /locus_tag="lmo2836" /db_xref="GeneID:986578" CDS complement(2923236..2924288) /locus_tag="lmo2836" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase" /protein_id="NP_466358.1" /db_xref="GeneID:986578" /translation="MKKLVATAPRVAVLVEYNDREVLEDEVKIKVQFASPKHGTEVVD FRGISPFIDEEFSPEWNLFVSRETNSARGIVFGEFQLGNMVVGEVVERGSKVTEYALG DIVCSYGPIMETVIVKAVDNYKLRKLPKGANWKNAVCYDPAQFAMSGVRDAHVRAGDY VVVVGLGAIGQIAIQLAKKAGASVVIGVDPLSHRREIAEKHGADATFDPITTDVGLEV KRLTGKLGADSIIETSGNAAALQAALRGIAYGGTISYVAFAKPFPEGFNLGREAHFNN AKIVFSRAASEPNPDYPRWDRKRIEETCWELLMNGYLDCSDIIDPVVPFADSAESYMK YVDQQPDLSIKMGITL" misc_feature complement(2923266..2924066) /locus_tag="lmo2836" /note="2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members; Region: 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_; cd08255" /db_xref="CDD:176217" misc_feature complement(order(2923434..2923442,2923518..2923523, 2923581..2923583,2923587..2923592,2923653..2923655, 2923707..2923709,2923719..2923724,2923779..2923796, 2923854..2923856,2923866..2923868,2924064..2924066)) /locus_tag="lmo2836" /note="putative NAD(P) binding site [chemical binding]; other site" /db_xref="CDD:176217" regulatory complement(2924298..2924303) /regulatory_class="ribosome_binding_site" gene complement(2924307..2925158) /locus_tag="lmo2837" /db_xref="GeneID:986555" CDS complement(2924307..2925158) /locus_tag="lmo2837" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_466359.1" /db_xref="GeneID:986555" /translation="MAVSSKKSKRTKKIAFYTTMVVFLCMTLFPFAIMLMTSFKSSKE AISTNPTFFPKEFTFQHYIDIFNPDIFPFLTYFKNSLVVSVFAAGIAVVLGILGAYAL SKLRFKGRMTINASFYTVYMFSGILLIVPLFKIISSLGLYDTETALIITMVVQTLPTA VFMLKSYFDTIPTDIEEAAMMDGLNRFQIILRIIVPLAISGIVSVFVYCFMVAWNDYL FASIFLSSSEKFTLPIGLNTLFSTPDYIWGRMMAASLVTALPVVIMYAISERFIKGNL TDGGVKG" misc_feature complement(2924310..2925119) /locus_tag="lmo2837" /note="ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpE; COG0395" /db_xref="CDD:440164" gene complement(2925145..2926026) /locus_tag="lmo2838" /db_xref="GeneID:986547" CDS complement(2925145..2926026) /locus_tag="lmo2838" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter permease" /protein_id="NP_466360.1" /db_xref="GeneID:986547" /translation="MKTKVYKRSDFKLAMILLAPSFVLLAALVLYPMISNIQISFLDM PLNPNIKSVFIGLQNYIDILKDPEFYKSLGLTVAYTALVVVGSTGMGLLVAIFFNREF RFRRTARSLIILSYVTPSISLIFAWKYMFNNGYGVINFMTVDVLHMFKEAPLWFDNPV SSFFLVTFFAIWRYFPYAFISFLAILQTVDKSLYEAADMDGANIWDKFKIVTLPAIMP VLATVITLRAIWMFYMFTDVYLLTNKVNILGVYLYKTAFAFNDLGKAAAISVILFVII FVVIIFARKRVDLNGGK" misc_feature complement(2925220..2926008) /locus_tag="lmo2838" /note="ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; Region: UgpA; COG1175" /db_xref="CDD:440788" regulatory complement(2925168..2925174) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2838" regulatory complement(2926031..2926036) /regulatory_class="ribosome_binding_site" regulatory complement(2926061..2926093) /regulatory_class="terminator" gene complement(2926101..2927393) /locus_tag="lmo2839" /db_xref="GeneID:987883" CDS complement(2926101..2927393) /locus_tag="lmo2839" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar ABC transporter substrate-binding protein" /protein_id="NP_466361.1" /db_xref="GeneID:987883" /translation="MKKKSLVLLVVVLVLSAVLAACGGKESGSKEVTIEFMHSSVEKE RLDVINKLIADFEKENPTIKIKQIPVEEDAFNTKVVTLARSGKLPAVMEVSQDFAKVM DKDELIDQDAVKEVIDSVGEDKYYEGATNLVRSEDGKSYIAAPLSGWVQGIWYNKKAL ADAGFEEPKNWADIEKVAKKFTNKADKKYGIAIPTAESTMSEQAFSQFALSNKANVLD AKGNVTIDTPEMKEALQYYKDLSAYTMPGSNDVTEIKDAFMNGTVPMAMYSTYILPSV YEEGDPKNIGFAIPEEKEKAVYGTVSGLTISAGLDDEQKKATKKFVEYLSQPENMATW VLMSPGGAQPVNKEVVEQKAYKENEVIKSFGDLPNEIAASFNDIQVFGLVDGKNLTKM GDITSSGIIAQMVNNVTVGGGDVSADLKAAQKKAEEGK" misc_feature complement(2926380..2927330) /locus_tag="lmo2839" /note="ABC-type glycerol-3-phosphate transport system, periplasmic component [Carbohydrate transport and metabolism]; Region: UgpB; COG1653" /db_xref="CDD:441259" gene complement(2927390..2928631) /locus_tag="lmo2840" /db_xref="GeneID:986521" CDS complement(2927390..2928631) /locus_tag="lmo2840" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sucrose phosphorylase" /protein_id="NP_466362.1" /db_xref="GeneID:986521" /translation="MEMDPNTDLSSVTRPRATPVLTTFQFDSGKVGHIWTTFSEDQID LNFACPEVLYKMIDVLMFYLEEGAEYVRLDAVGFMWKVPGTSSIHLEETHEIVKLFRD LVDIAAPGTIIITETNVPHVDNISYFGNGEKEAHMVYQFPLPPLVLHAIHHGNAKFLR NWAKNLELPEGKRTFFNFLASHDGIGLNPVRGIIPEAEILALVNDLEEEGALVSYKQN PDGSKSPYEINVTYMDALSKQADTDDLRLARFLVAHAVLMSIPGVPAVYVQSILGSRN DYLGVEATSHNRSINRKKYDLAEITAELEQRGSLRKATYDALTKLISTRKAESLFHPE IPMEVLESTAELFVVKRSSDAESIILIHNLSEKEVSYSLDSGVYTNLYKGSTVTGSDS IKLSGYEFCWLKTKNYREEQK" misc_feature complement(2927591..>2928628) /locus_tag="lmo2840" /note="Alpha amylase catalytic domain family; Region: AmyAc_family; cl38930" /db_xref="CDD:476817" misc_feature complement(order(2928083..2928088,2928284..2928286, 2928410..2928412,2928416..2928418)) /locus_tag="lmo2840" /note="active site" /db_xref="CDD:200451" misc_feature complement(order(2928083..2928085,2928284..2928286, 2928410..2928412)) /locus_tag="lmo2840" /note="catalytic site [active]" /db_xref="CDD:200451" regulatory complement(2927401..2927406) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2840" regulatory complement(2928638..2928643) /regulatory_class="ribosome_binding_site" gene complement(2928668..2929090) /locus_tag="lmo2841" /db_xref="GeneID:986398" CDS complement(2928668..2929090) /locus_tag="lmo2841" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sucrose phosphorylase" /protein_id="NP_466363.1" /db_xref="GeneID:986398" /translation="MTNLRKRLSRLYAEDVVDSLAARIEARVQQTQQRKLTRKDQWDE KDIVLITYGDQFKEESQKTLTTFKKMYDSYLKSAFEIVHFLPFYPYSSDDGFSVIDYK AVNPELGDWKDIKEMEKSARLMFDFVCNHMSAKSDWFK" misc_feature complement(<2928671..2928967) /locus_tag="lmo2841" /note="Alpha amylase catalytic domain family; Region: AmyAc_family; cl38930" /db_xref="CDD:476817" regulatory complement(2929097..2929102) /regulatory_class="ribosome_binding_site" regulatory 2929303..2929308 /regulatory_class="ribosome_binding_site" gene 2929315..2930340 /locus_tag="lmo2842" /db_xref="GeneID:986397" CDS 2929315..2930340 /locus_tag="lmo2842" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="NP_466364.1" /db_xref="GeneID:986397" /translation="MASTIYDIAKHAGVSKSTVSRVLNNQANISEESRKKVLAAIDQL NYQPSKLARALTSSGFDAIMVISNRSTTTTTGNPFFSEIIQSISTQAELENFDLILQT AKNSEDELKKCLSKIQEKMIKGIIMLSSPADEDFFHQLDPYNIPIVVTGKVEGHYKNI YSVDTDNFGDSYALTKHLIKQGHQKIACIHAPLDYHVSIDRLAGFRSCLFDHQLDLRN DWIIDSGYSIEDSYKAALRLMEGPDKPTAVFATDDLKVLSIYKMAADKNLQIPTDFSV IGYNDKVASSFLSPPLTSIDIPINKLGKKATNLLFRLIHQDKNVPKTTIIQTEMIERE SIQKINA" misc_feature 2929324..2930319 /locus_tag="lmo2842" /note="DNA-binding transcriptional regulator, LacI/PurR family [Transcription]; Region: PurR; COG1609" /db_xref="CDD:441217" gene 2930362..2930434 /locus_tag="lmot67" /db_xref="GeneID:3167620" tRNA 2930362..2930434 /locus_tag="lmot67" /product="tRNA-Val" /db_xref="GeneID:3167620" regulatory complement(2930436..2930468) /regulatory_class="terminator" gene complement(2930479..2932473) /locus_tag="lmo2843" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986395" CDS complement(2930479..2932473) /locus_tag="lmo2843" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2843" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466365.1" /db_xref="GeneID:986395" /translation="MTKEYYFIKPELSSPETKQENIDSWLKTQDKTFYDAQIAQERDY CFWCNIVETAKPNSRTSYTSMAYTLNEPNMLNSAGKTSFILSEEEVLYIHTLSVVRDG KVIDKLDDINVKVLDYVRDENQASFNDEKKVTVLIRDLHLNDIFIVETTIERKYEESS IRNDFFRWIYSAPNSYWAYGKYRFELKNETEKKLEANFHYFRDEAGTILEKDKVMVEH NESYTIEKEDYIGEDAKELEITPFVDFVTEQTYPQITKTISDIYQKFYQVNLAEFAAD IVTELDELPTLDHKIKHAIDFVQKEVYYLYNETEMDGHEPQAAEVTYKTKQGDCKAKT VLLKVILDYLGVNSELILVNYGSDVFLPVYTPSPFNFNHAILKITHNNQVYFIDATMS SDQGFLANRQKNSFMYYLEIKPGAELQKQEPFQDEIPSVEEVVYCDVKDNAAEITFER KLRDGMANGSREMFKNDSNKDIINRYNFAIYSNMTLYKKYEENEVDSHFSNTSIQIVE DNKDLNELSIIYKATISDPYIVENKKRYLHFWNWNNFIDDGAEKHFHKDFPYWIDRNV IKTELHLTTDKSIDQQERYTRQECDIKSKYLNHRMTKKIHKNGASCYLEYRPYHNLTI KEKDLEEYVEANKEILKSNWGIGIDIIEDGLFKKLGKLFK" misc_feature complement(2931304..>2931666) /locus_tag="lmo2843" /note="Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]; Region: YebA; COG1305" /db_xref="CDD:440916" regulatory complement(2932481..2932486) /regulatory_class="ribosome_binding_site" gene complement(2932609..2933148) /locus_tag="lmo2844" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986394" CDS complement(2932609..2933148) /locus_tag="lmo2844" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466366.1" /db_xref="GeneID:986394" /translation="MENRKQMIKTERLFLSEMTLADTEILFGYWSDDSVTRYMNIEPF QSLQPVEEMIRMLRQLEIEGKALRCVIILQATEEIIGTCGFNYIDHENHRAEIAYDLG TRFWKRGYATEAVRALMEWGKESFELHRIEAKVDPRNSASIALLEKLGFSEEGLLRDY EKIGETYQDVQLFSWIDEI" misc_feature complement(2932615..2933130) /locus_tag="lmo2844" /note="Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones]; Region: RimL; COG1670" /db_xref="CDD:441276" regulatory complement(2933160..2933165) /regulatory_class="ribosome_binding_site" regulatory 2933290..2933295 /regulatory_class="ribosome_binding_site" gene 2933303..2934715 /locus_tag="lmo2845" /db_xref="GeneID:986393" CDS 2933303..2934715 /locus_tag="lmo2845" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="MFS transporter" /protein_id="NP_466367.1" /db_xref="GeneID:986393" /translation="MEQTNKRNTLALISIMLGAFISLLDTTIVNVALPDITTALHATS ETIEWVISGYALAFGLVLILAGRLGDKFGRKNIYIIGITLFLIMSVTAGFADSENSLI ISRVIQGLAAGLFFPQINATIMDMYSGKSLGKIFGILGSVIGVGTAIGPLTGGLLIEL FGATNGWRAVFFVNVPFVLVTLVLAMLYLPKRTVSTKKISFDLPGVGLLTIALLLLLF PLISNGANDFKPVDYFLMALSIPLFIILYKWSVYQEKKGNQPLIAPNLLKNNQFVSGM LLSLVYFAAFTSIFFVLSLTWQTGFNRSAILSGLAISPFALGSVLAASNSYRLIPLLG RKLLMLGVTLVIVGLGTVSIVFHLNDGAFSAWLLFLPLFIAGIGSGLTIAPLNSFTLS TVTGIDRGGASGMFNTAQRIGSSFGIAVVGSVFFRTLGNTAATSKASAFSDSLQMSMY VNIVLLVVCFLLVFRLPKNI" misc_feature 2933345..2934703 /locus_tag="lmo2845" /note="Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; Region: MFS_MMR_MDR_like; cd17321" /db_xref="CDD:340879" misc_feature order(2933366..2933371,2933378..2933383,2933390..2933392, 2933486..2933488,2933636..2933641,2933645..2933653, 2933660..2933662,2933720..2933722,2933729..2933734, 2933741..2933743,2934137..2934139,2934146..2934151, 2934158..2934166,2934173..2934175,2934257..2934259, 2934269..2934271,2934434..2934439,2934449..2934451, 2934461..2934463,2934509..2934511,2934518..2934523, 2934530..2934535,2934542..2934544) /locus_tag="lmo2845" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340879" regulatory complement(2934709..2934750) /regulatory_class="terminator" regulatory 2934720..2934761 /regulatory_class="terminator" gene complement(2934756..2935070) /locus_tag="lmo2846" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986389" CDS complement(2934756..2935070) /locus_tag="lmo2846" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466368.1" /db_xref="GeneID:986389" /translation="MERVASIMYLYPGNKEEYKKRHDELWPEMKEALKAHGAANYSIF LDEKTDTLFAYVEVEDKAIYDKIAETEICQKWWKYMAPIMKSNPNNSPVAVDLKEVFY LA" misc_feature complement(2934759..2935064) /locus_tag="lmo2846" /note="L-rhamnose mutarotase; Region: YiiL_rotase; TIGR02625" /db_xref="CDD:131674" regulatory complement(2935079..2935084) /regulatory_class="ribosome_binding_site" gene complement(2935083..2935904) /locus_tag="lmo2847" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986387" CDS complement(2935083..2935904) /locus_tag="lmo2847" /EC_number="4.1.2.19" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="rhamnulose-1-phosphate aldolase" /protein_id="NP_466369.1" /db_xref="GeneID:986387" /translation="MTKDIMDAVFIKEMAKTTSNLYRLGWDERNGGNITYLLDEKEVA EYLDVKQIIRTIPMDFDGKKLAGKYFLVTGSGKYFKNVEEAPAVNLGVIQVSEDGKAV HLLWGYTDGGLPTSELPAHFMSHIARLSVDPENRVVMHCHATHLLAMTFTHELTERAF TRTLWQMCTECLVVFPEGVGIIPWLVPGTNEIGEATSEKMKENRLIVWPHHGIYGAGQ SMDETFGLIETAEKAAEVYTIVMSQGGIKQAITDEQLKALGERFGVEAKAGYLNN" misc_feature complement(2935092..2935901) /locus_tag="lmo2847" /note="rhamnulose-1-phosphate aldolase; Region: rhamnu_1P_ald; TIGR02624" /db_xref="CDD:131673" misc_feature complement(order(2935128..2935130,2935188..2935190, 2935209..2935211,2935221..2935223,2935242..2935244, 2935275..2935277,2935353..2935355,2935395..2935400, 2935404..2935406,2935428..2935430,2935452..2935457, 2935470..2935475,2935479..2935481,2935662..2935667, 2935671..2935673,2935821..2935823,2935845..2935847, 2935857..2935859)) /locus_tag="lmo2847" /note="intersubunit interface [polypeptide binding]; other site" /db_xref="CDD:238232" misc_feature complement(order(2935272..2935274,2935479..2935481, 2935485..2935487,2935554..2935562,2935677..2935682, 2935806..2935808)) /locus_tag="lmo2847" /note="active site" /db_xref="CDD:238232" misc_feature complement(order(2935272..2935274,2935479..2935481, 2935485..2935487)) /locus_tag="lmo2847" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:238232" regulatory complement(2935913..2935918) /regulatory_class="ribosome_binding_site" gene complement(2935917..2937179) /locus_tag="lmo2848" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986386" CDS complement(2935917..2937179) /locus_tag="lmo2848" /EC_number="5.3.1.14" /experiment="EXISTENCE:[PMID:19448609]" /note="catalyzes the formation of L-rhamnulose from L-rhamnose" /codon_start=1 /transl_table=11 /product="L-rhamnose isomerase" /protein_id="NP_466370.1" /db_xref="GeneID:986386" /translation="MGQETEINKRYQVAKERYQAIGVDTEKALKTLKDIKISMHCWQG DDVKGFLNPDGELTGGIMATGNYPGAAHTPKQLRQDLEKAYSLIPGKHKLNLHAIYVD TDEKVDLNEIEPKHFTPWVEWAKEQGLGLDFNPTFFSHPMFKDNYTLASPDKEVRDFW IEHGKRSRKISEYFGKELGQTSINNFWVPDGIKDCPIDRYTPRKRLMEALDEVFAEKL DEKYTQEAVESKLFGLGAEAYTVGSHEFYMGYGITRDKLICLDAGHFHPTEVISNKLS SLALFSKGVMLHVSRPVRWDSDHVVIMDDELIEIGRELVRNDLLGITNIGLDFFDATI NRIAAWVVGTRNTQKSLLKALLEPTADLKKMELENDFTSRMAITEELKDFPFGDVWNY FCEINGVPVGLDWLKEVKAYEEDVLLKR" misc_feature complement(2935920..2937173) /locus_tag="lmo2848" /note="L-rhamnose isomerase; Provisional; Region: PRK01076" /db_xref="CDD:179217" regulatory complement(2937188..2937193) /regulatory_class="ribosome_binding_site" gene complement(2937192..2938643) /locus_tag="lmo2849" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986385" CDS complement(2937192..2938643) /locus_tag="lmo2849" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="rhamnulokinase" /protein_id="NP_466371.1" /db_xref="GeneID:986385" /translation="MKHYVAVDIGASSGRLILGKLVNEKLQLEEIHRFKNGFTYRDGH ERWEIDQLMQEIFIGLEKVKQLGISECVLGIDTWGVDYVLIGASGEKLADPISYRDKR TLNAVQNLTSEYPREYIYKKTGIQFMELNTLYQLYVEERDLLERAEKILLIPDYIGYV LTGVKVAETTNSSTTQMLNLREQLFDKDLLSHLNIDVEKFAPLTDAGTYLGEVKEDWL KMYDIPNCDVVTVATHDTASAVVGTPAEGENWAFLSSGTWSLIGMELSAPINNEVAFK ENYTNEWGAYGTYRFLKNIMGLWIVQEIARMDDYKHSFAEMAEEAGNYPYFKQIINVN DARFNNPENMVDEIRLYCRETGQTVPETIGELTNCVYGSLALYYALELEKMTEITGKK IEKLYIVGGGSNVAMLNQLTAKLAGIEVFAGPSEATAIGNLVVQMINQGEIESMRAGR KIIRNSFEIGEFSCGDVRFEEIKERFTKVLEFN" misc_feature complement(2937267..2938631) /locus_tag="lmo2849" /note="rhamnulokinase; Region: rhamnulo_kin; TIGR02627" /db_xref="CDD:274237" regulatory complement(2938651..2938656) /regulatory_class="ribosome_binding_site" gene complement(2938662..2939930) /locus_tag="lmo2850" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986384" CDS complement(2938662..2939930) /locus_tag="lmo2850" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sugar transporter" /protein_id="NP_466372.1" /db_xref="GeneID:986384" /translation="MAGSSTSKKGTIAVSLTNYLDSGCIVAGASGLTLWATQFGLSSF AVGLLGAVSANAFGSAIGALIGGHLADKYGRKFIYTYNMLVYMLGVTIIMFAMNFPML LIGFLVTGLSVGAGVPASWTYISEMADPSIRARNIGISQFAWSCGPAIIFTLGIIVSP LGLLGNRLLFLSLLIVAFVAWQLQRKLEESKDWEAEQVKMKESGNRLEHPFKTAFSSM VNVKSVLFLVGVYLFWNLVAGAMGFFMPFVYETVGGLSNTQANLLQAVLWILTAASTY FGFAKFGDRVSHRGLFFVGALMAVASWVVLTFVGMSWVGLWTFVILWGISAGIGAQAF YALWSTELFPTKYRGGVQGVMFFLVRGSTGVWSIVFPVILANLGFTVAGTIMIGLLTV SLLIGVIWAPKTRGRSLDDITKERYGNTID" misc_feature complement(2938734..2939900) /locus_tag="lmo2850" /note="Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; Region: MFS_SV2_like; cd17316" /db_xref="CDD:340874" misc_feature complement(order(2938842..2938844,2938851..2938856, 2938863..2938868,2938875..2938877,2938923..2938925, 2938935..2938937,2938947..2938952,2939103..2939105, 2939115..2939117,2939202..2939204,2939211..2939219, 2939226..2939231,2939238..2939240,2939487..2939489, 2939496..2939501,2939508..2939510,2939568..2939570, 2939577..2939585,2939589..2939594,2939742..2939744, 2939844..2939846,2939853..2939858,2939865..2939870)) /locus_tag="lmo2850" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340874" regulatory complement(2939940..2939945) /regulatory_class="ribosome_binding_site" regulatory 2940040..2940045 /regulatory_class="ribosome_binding_site" gene 2940053..2941033 /locus_tag="lmo2851" /db_xref="GeneID:986382" CDS 2940053..2941033 /locus_tag="lmo2851" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="AraC family transcriptional regulator" /protein_id="NP_466373.1" /db_xref="GeneID:986382" /translation="MEALNKKLFRLNSKEKIQKSTGTFVPDLPNGSFLKENGSMELLN DYFFKNKDIYISKHNRFADYPYHTHQFLELNYMYSGSSEQIIEGNKETLHEGELLLLD SGCHHSIKATGEKDILINILFRDQQISLEWLTSIKKKNSLLFDFLLHSSVSEQSLKKY IIFQSAQIPHIQQILNQIITEYFLEEEFSSRIITLYLPILFTELVRKCDTYLADDLTN SQSSTTSTMLEVIKLIESNYRTITLTSAADTLGYNKNYLSNFIKKNTNFTFTELVNKQ KMLAANLLIETTSTPIELIIEKVGFSNKTYFYSLYKRTFNLLPNEVRNKK" misc_feature 2940167..2940427 /locus_tag="lmo2851" /note="AraC/XylS family transcriptional regulators similar to Listeria monocytogenes Lmo2851 protein, N-terminal cupin domain; Region: cupin_Lmo2851-like_N; cd06996" /db_xref="CDD:380400" misc_feature 2940791..2941027 /locus_tag="lmo2851" /note="Helix-turn-helix domain; Region: HTH_18; pfam12833" /db_xref="CDD:432818" regulatory complement(2941023..2941058) /regulatory_class="terminator" regulatory 2941026..2941065 /regulatory_class="terminator" gene complement(2941083..2941544) /locus_tag="lmo2852" /db_xref="GeneID:986380" CDS complement(2941083..2941544) /locus_tag="lmo2852" /experiment="EXISTENCE:[PMID:19448609]" /note="lmo2852" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466374.1" /db_xref="GeneID:986380" /translation="MVVYKGSVHEMWQKYRAEHPMITSKFEAWSFGNSARMANELGGL VMDGIKTGTSSLFYWYDQGGETMPSVGSHVVLLDGNEEAMGIIKLIGVTIMPFNEVPE TFAYLEGEGDRTLEYWRKVHTSFFTNECVELGIPFEEDALVVCEEFEVVYK" misc_feature complement(2941086..2941526) /locus_tag="lmo2852" /note="Predicted RNA-binding protein YhfF, contains PUA-like ASCH domain [General function prediction only]; Region: YhfF; COG4405" /db_xref="CDD:443529" regulatory complement(2941553..2941558) /regulatory_class="ribosome_binding_site" regulatory complement(2941555..2941591) /regulatory_class="terminator" gene complement(2941599..2942219) /locus_tag="lmo2853" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986379" CDS complement(2941599..2942219) /locus_tag="lmo2853" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466375.1" /db_xref="GeneID:986379" /translation="MRDITAQGSNVEEAIQKALATLETTRDKVEVEVLDEGKKGIFGI GSRLAMVKVIEKEDGIQVAIDYLLDVATKMGAVITIDVEEVGKDVKLQIKGDSLGMLI GKHGQTLNALQYLTQLIANKTTSQYKNIIVNVGDYRERRHETLVILANKMADKALKTK RAVHLEPMPSFERKIIHAILSENEQIETHSEGRDPYRYIVIKPVRK" misc_feature complement(2941611..2942210) /locus_tag="lmo2853" /note="RNA-binding cell elongation regulator Jag/EloR; Region: Jag_EloR; NF041568" /db_xref="CDD:469453" gene complement(2942216..2943079) /locus_tag="lmo2854" /experiment="EXISTENCE:[PMID:19448609]" /db_xref="GeneID:986378" CDS complement(2942216..2943079) /locus_tag="lmo2854" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="sporulation protein SpoJ" /protein_id="NP_466376.1" /db_xref="GeneID:986378" /translation="MKKKKRFKQKLLIASLVIGLMAVLSGCGYSTDPITSESTGFWSH YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIK ELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE IKTDSFLWMQLGNPDPYYILPVVAALTTFLSSKISMMGQTQQNKSMAMIVYIMPVMIL FMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQVAEDRLKKKAANM KASKKGGKKRK" misc_feature complement(2942333..2943049) /locus_tag="lmo2854" /note="putative inner membrane protein translocase component YidC; Provisional; Region: PRK00145; cl00489" /db_xref="CDD:469790" regulatory complement(2942232..2942237) /regulatory_class="ribosome_binding_site" /locus_tag="lmo2854" regulatory complement(2943090..2943095) /regulatory_class="ribosome_binding_site" gene complement(2943120..2943479) /gene="rnpA" /locus_tag="lmo2855" /db_xref="GeneID:986374" CDS complement(2943120..2943479) /gene="rnpA" /locus_tag="lmo2855" /EC_number="3.1.26.5" /experiment="EXISTENCE:[PMID:19448609]" /note="protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates" /codon_start=1 /transl_table=11 /product="ribonuclease P" /protein_id="NP_466377.1" /db_xref="GeneID:986374" /translation="MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHFRIG LSVSKKIGNAVCRNRIKRYIRQSFHELESQINPENEYIIIARKPAANMDFHEVKKSLI HVLKVGRVLKQKPNNSK" misc_feature complement(2943162..2943461) /gene="rnpA" /locus_tag="lmo2855" /note="RNase P protein component [Translation, ribosomal structure and biogenesis]; Region: RnpA; COG0594" /db_xref="CDD:440359" regulatory complement(2943490..2943496) /regulatory_class="ribosome_binding_site" regulatory complement(2943546..2943568) /regulatory_class="terminator" gene complement(2943569..2943703) /gene="rpmH" /locus_tag="lmo2856" /db_xref="GeneID:986371" CDS complement(2943569..2943703) /gene="rpmH" /locus_tag="lmo2856" /experiment="EXISTENCE:[PMID:19448609]" /note="in Escherichia coli transcription of this gene is enhanced by polyamines" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L34" /protein_id="NP_466378.1" /db_xref="GeneID:986371" /translation="MKRTYQPSKRKRKKVHGFRTRMSTKNGRRVLASRRRKGRKVLSA " misc_feature complement(2943572..2943703) /gene="rpmH" /locus_tag="lmo2856" /note="Ribosomal protein L34 [Translation, ribosomal structure and biogenesis]; Region: RpmH; COG0230" /db_xref="CDD:440000" regulatory complement(2943712..2943717) /regulatory_class="ribosome_binding_site" gene complement(2943871..2944341) /locus_tag="lmo2857" /db_xref="GeneID:986370" CDS complement(2943871..2944341) /locus_tag="lmo2857" /experiment="EXISTENCE:[PMID:19448609]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_466379.1" /db_xref="GeneID:986370" /translation="MIFQRLLKTRDTEFYRVIQNGNIDDVFGYLLIHDKREPAEIDDF KVFAKSNINKEAFSVNIKKNHIYTMFFHFTDLEEEQEIPKFTKVIRFIEGLLSFQPET SHYVDNYLIKEKLIFEYPAEFEKIGEFAKYLVKLSGRKITIPDTTREKYIYLTQ" regulatory complement(2944351..2944356) /regulatory_class="ribosome_binding_site" CONTIG join(AL591824.1:1..2944528)