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LOCUS NP_708747 1372 aa linear CON 24-AUG-2016 ACCESSION NP_708747 VERSION NP_708747.3 DBLINK BioProject: PRJNA62907 Assembly: GCF_000006925.2 DBSOURCE REFSEQ: accession NC_004337.2 KEYWORDS RefSeq. SOURCE Shigella flexneri 2a str. 301 ORGANISM Shigella flexneri 2a str. 301 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella. REFERENCE 1 (residues 1 to 1372) AUTHORS Jin,Q., Yuan,Z., Xu,J., Wang,Y., Shen,Y., Lu,W., Wang,J., Liu,H., Yang,J., Yang,F., Zhang,X., Zhang,J., Yang,G., Wu,H., Qu,D., Dong,J., Sun,L., Xue,Y., Zhao,A., Gao,Y., Zhu,J., Kan,B., Ding,K., Chen,S., Cheng,H., Yao,Z., He,B., Chen,R., Ma,D., Qiang,B., Wen,Y., Hou,Y. and Yu,J. TITLE Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157 JOURNAL Nucleic Acids Res. 30 (20), 4432-4441 (2002) PUBMED 12384590 REFERENCE 2 (residues 1 to 1372) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (26-AUG-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1372) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (03-AUG-2011) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1372) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (06-DEC-2004) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 5 (residues 1 to 1372) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (21-MAY-2001) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence is identical to AAN44454. On Aug 21, 2013 this sequence version replaced NP_708747.2. RefSeq Category: Reference Genome CLI: Clinical Isolate FGS: First Genome sequenced Method: conceptual translation. FEATURES Location/Qualifiers source 1..1372 /organism="Shigella flexneri 2a str. 301" /strain="301" /serotype="2a" /db_xref="taxon:198214" Protein 1..1372 /product="serine protease" /calculated_mol_wt=146322 Region 1..>33 /region_name="ESPR" /note="Extended Signal Peptide of Type V secretion system; pfam13018" /db_xref="CDD:463773" Region 56..774 /region_name="Peptidase_S6" /note="Immunoglobulin A1 protease; pfam02395" /db_xref="CDD:396804" Region 825..1067 /region_name="PL1_Passenger_AT" /note="Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 1, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of Neisseria and Haemophilus IgA1 proteases; cd01343" /db_xref="CDD:238653" Region 964..1372 /region_name="autotrans_barl" /note="outer membrane autotransporter barrel domain; TIGR01414" /db_xref="CDD:273608" CDS 1..1372 /gene="pic" /locus_tag="SF2973" /coded_by="complement(NC_004337.2:3067737..3071855)" /transl_table=11 /db_xref="GeneID:1026598" CONTIG join(WP_001045650.1:1..1372) ORIGIN 1 mnkvyslkyc pvtggliavs elarrvikkt crrlthilla gipaiclcys qisqagivrs 61 diayqiyrdf aenkglfvpg andipvydkd gklvgrlgka pmadfssvss ngvatlvspq 121 yivsvkhngg yrsvsfgngk ntyslvdrnn hpsidfhapr lnklvtevip savtsegtka 181 naykyteryt afyrvgsgtq ytkdkdgnlv kvaggyafkt ggttgvplis dativsnpgq 241 tynpvngplp dygapgdsgs plfaydkqqk kwvivavlra yagingatnw wnviptdyln 301 qvmqddfdap vdfvsglgpl nwtydktsgt gtlsqgsknw tmhgqkdndl nagknlvfsg 361 qngaiilkds vtqgagylef kdsytvsaes gktwtgagii tdkgtnvtwk vngvagdnlh 421 klgegtltin gtgvnpgglk tgdgivvlnq qadtagniqa fssvnlasgr ptvvlgdarq 481 vnpdniswgy rggkldlngn avtftrlqaa dygavitnna qqksqllldl kaqdtnvsep 541 tignispfgg tgtpgnlysm ilnsqtrfyi lksasygntl wgnslndpaq wefvgmnknk 601 avqtvkdril agrakqpvif hgqltgnmdv aipqvpggrk vifdgsvnlp egtlsqdsgt 661 lifqghpvih asisgsapvs lnqkdwenrq ftmktlslkd adfhlsrnas lnsdiksdns 721 hitlgsdraf vdkndgtgny vipeegtsvp dtvndrsqye gnitlnhnsa ldigsrftgg 781 idaydsavsi tspdvlltap gafagssltv hdgghltaln glfsdghiqa gkngkitlsg 841 tpvkdtanqy apavyltdgy dltgdnaale itrgahasgd ihasaastvt igsdtpaela 901 saetaasafa gsllegynaa fngaitggra dvsmhnalwt lggdsaihsl tvrnsrisse 961 gdrtfrtltv nkldatgsdf vlrtdlknad kinvtekatg sdnslnvsfm nnpaqgqaln 1021 iplvtapagt saemfkagtr vtgfsrvtpt lhvdtsggnt kwildgfkae adkaaaakad 1081 sfmnagyknf mtevnnlnkr mgdlrdtngd agawarimsg agsadggysd nythvqvgfd 1141 kkheldgvdl ftgvtmtytd ssadshafsg ktksvgggly asalfesgay idligkyihh 1201 dndytgnfas lgtkhynths wyagaetgyr yhltedtfie pqaelvygav sgktfrwkdg 1261 dmdlsmknrd fsplvgrtgv elgktfsgkd wsvtaragts wqfdllnnge tvlrdasgek 1321 rikgekdsrm lfnvgmnaqi kdnmrfglef eksafgkynv dnavnanfry mf