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LOCUS NP_708627 420 aa linear CON 24-AUG-2016 ACCESSION NP_708627 VERSION NP_708627.1 DBLINK BioProject: PRJNA62907 Assembly: GCF_000006925.2 DBSOURCE REFSEQ: accession NC_004337.2 KEYWORDS RefSeq. SOURCE Shigella flexneri 2a str. 301 ORGANISM Shigella flexneri 2a str. 301 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella. REFERENCE 1 (residues 1 to 420) AUTHORS Jin,Q., Yuan,Z., Xu,J., Wang,Y., Shen,Y., Lu,W., Wang,J., Liu,H., Yang,J., Yang,F., Zhang,X., Zhang,J., Yang,G., Wu,H., Qu,D., Dong,J., Sun,L., Xue,Y., Zhao,A., Gao,Y., Zhu,J., Kan,B., Ding,K., Chen,S., Cheng,H., Yao,Z., He,B., Chen,R., Ma,D., Qiang,B., Wen,Y., Hou,Y. and Yu,J. TITLE Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157 JOURNAL Nucleic Acids Res. 30 (20), 4432-4441 (2002) PUBMED 12384590 REFERENCE 2 (residues 1 to 420) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (26-AUG-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 420) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (03-AUG-2011) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 420) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (06-DEC-2004) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 5 (residues 1 to 420) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (21-MAY-2001) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence is identical to AAN44334. RefSeq Category: Reference Genome CLI: Clinical Isolate FGS: First Genome sequenced Method: conceptual translation. FEATURES Location/Qualifiers source 1..420 /organism="Shigella flexneri 2a str. 301" /strain="301" /serotype="2a" /db_xref="taxon:198214" Protein 1..420 /product="diaminopimelate decarboxylase" /calculated_mol_wt=46044 Region 2..411 /region_name="lysA" /note="diaminopimelate decarboxylase; TIGR01048" /db_xref="CDD:273415" Site order(52,54,73,100,142,189,191,194,226..227,268..271,307, 311,342,378,382,386) /site_type="active" /db_xref="CDD:143501" Site order(52,54,73,100,142,189,191,194,226..227,268..271,342, 378) /site_type="other" /note="pyridoxal 5'-phosphate (PLP) binding site [chemical binding]" /db_xref="CDD:143501" Site order(54,191,194,271,307,311,342..343,378,382,386) /site_type="other" /note="substrate binding site [chemical binding]" /db_xref="CDD:143501" Site order(54,342) /site_type="active" /note="catalytic residues [active]" /db_xref="CDD:143501" Site order(59..60,75..76,78..79,102..104,108,122,125,162..165, 286,288,295,297,339..344,346,381..383,385..388,391) /site_type="other" /note="dimer interface [polypeptide binding]" /db_xref="CDD:143501" CDS 1..420 /gene="lysA" /locus_tag="SF2848" /coded_by="complement(NC_004337.2:2937997..2939259)" /note="Code: E; COG: COG0019" /transl_table=11 /db_xref="GeneID:1025821" CONTIG join(WP_001120740.1:1..420) ORIGIN 1 mphslfstdt dltaenllrl paefgcpvwv ydaqiirrqi aalkqfevvr faqkacsnih 61 ilrlmreqgv kvdsvslgei eralaagynp qthpddivft advidqatle rvselqipvn 121 agsvdtldql gqvspghrvw lrvnpgfghg hsqktntgge nskhgiwytd lpaaldviqr 181 hhlqlvgihm higsgvdyah leqvcgamvr qviefgqdlq aisaggglsi pyqqgeeavd 241 tehyyglwna areqiarhlg hpvkleiepg rflvaqsgvl itqvrsvkqm gsrhfvlvda 301 gfndlmrpam ygsyhhisal aadgrsleha ptvetvvagp lcesgdvftq qeggnvetra 361 lpevkagdyl vlhdtgayga smssnynsrp llpevlfdng qarlirrrqt ieellalell