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LOCUS NP_463354 1225 aa linear CON 08-SEP-2022 enterica subsp. enterica serovar Typhimurium str. LT2]. ACCESSION NP_463354 VERSION NP_463354.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 1225) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 1225) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1225) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1225) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL23313. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1225 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..1225 /product="putative type II restriction enzyme, methylase subunit" /calculated_mol_wt=141208 Region 6..1210 /region_name="BREX_1_MTaseX" /note="BREX-1 system adenine-specific DNA-methyltransferase PglX; NF033452" /db_xref="CDD:468037" CDS 1..1225 /locus_tag="STM4495" /coded_by="complement(NC_003197.2:4743280..4746957)" /transl_table=11 /db_xref="GeneID:1256021" CONTIG join(WP_001095591.1:1..1225) ORIGIN 1 mntnnikkya pqarnqfrda viqklttlgi sadkkgnlqi adaelvgetm rygqfdypks 61 tltrrdrlvk rareqgfdvl vehcaytwfn rlcairymei hgyldhgfhm lshpdnptgf 121 evldhvpeva eallpekkaq lvemklsgnq deaiyrelll aqchalhram pflfeavdde 181 aelllpdnlt rtdsilrglv dgipeedwqe vevigwlyqf yisekkdavi gkvvksedip 241 aatqlftpnw ivqylvqnsv grqwlqtypd splkgkmdyy iepaeqtpev qaqlaaitpa 301 siepesikvl dpacgsghil ievynvlkni yeergyrard ipqlilenni fgldiddraa 361 qlsgfallmm arqddrrift rdvrlnivsl qeslhldiak lwqqlnfhqq nqtgsmgdmf 421 aentalahtd saeyqllmrt lkrfvnaktl gsliqvpqee eaelkaflea lyrmeqegdf 481 qqkaaakafi pyiqqawila qrydavvanp pymggkgmns elkefaknnf pdskadlfam 541 fmqnafsllk engfnaqvnm qswmflssye alrnwlldnk tfitmahlga rafgqisgev 601 vqttawvikn qhseryqpvf frlidgreev kksdlllrkn ifdkftqhdf knipgmpiay 661 widlpsllsf rhhkklgeki alkagmstgd nikfqrywye vsikktlitn kesntkidih 721 nikwfpcssg geyrkwygnn eivvnwenng yeirnfkfen gktrsavrnd eyyfregitw 781 skisqgnfcv ryrpkgfvfd dtgrcgfsnn knellyaagl mctpvvnhyl silaptlsft 841 sgelasvpyp eiedeiielv tnaieiaknd wdsqeqswdy vcspllehns tqllrniykq 901 kintniklve tlllientin nifidklqld ktiikavlqs eitllcnpny rykniqdhtd 961 ltnkyytdit idilsyiigc mmgrysldre glvyahegnk gfaelvaeda yktfpadndg 1021 ilplmddewf dddvtsrvke fvrtvwgeeh lqenlefiae slclyaikpk kgesaldtir 1081 rylstqfwkd hmkmykkrpi ywlfssgkek afeclvylhr yndatlarmr teyvvpllar 1141 yqanidrlne qvdgasggea trlkrerdsl skkfnelrsf ddrlrhyadm risidlddgv 1201 kvnygkfgdl ladvkaitgn apeii