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LOCUS NP_461467 1644 aa linear CON 08-SEP-2022 enterica serovar Typhimurium str. LT2]. ACCESSION NP_461467 VERSION NP_461467.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 1644) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 1644) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1644) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1644) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL21426. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1644 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..1644 /product="putative inner membrane lipoprotein" /calculated_mol_wt=179516 Region 23..1642 /region_name="YfaS" /note="Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only]; COG2373" /db_xref="CDD:441940" CDS 1..1644 /locus_tag="STM2532" /coded_by="complement(NC_003197.2:2667763..2672697)" /note="similar to E. coli orf, hypothetical protein (AAC75573.1); Blastp hit to AAC75573.1 (1653 aa), 81% identity in aa 1 - 1653" /transl_table=11 /db_xref="GeneID:1254054" CONTIG join(WP_000681858.1:1..1644) ORIGIN 1 mkhlrvvacm imlalagcdn ndktapttks eapavaqpsp aqdpaqlqkl aqqsqgkalt 61 lldaseaqld gaatlvltfs ipldpeqdfs rvvhvvdkks gsvdgawela pnlkelrlrh 121 lepervlvvt vdpavkalnn atfgksyekt ittrdvqpsv gfasrgsllp gkiaeglpvm 181 alnvnhvdvn ffrvkpgsla sfvsqweyrs slsnwesdnl lkmadlvytg rfdlnparnt 241 reklllplsd ikplqqagvy vavmnqaghy nysnaatlft lsdigvsahr yhnrldiftq 301 slengaaqsg ieivllndkg qtlaqatsda qghvqleadk aaalllarke eqttlldltl 361 paldlsefnv agapgyskqf fmfgprdlyr pgetvilngl lrdsdgktlp dqpvklevvk 421 pdgqvmrtvv sqpenglyrl nypldinapt glwhvrantg dnllrswdfh vedfmperma 481 lnltaqktpl apadevkfsv vgyylygapa ngntlqgqlf lrplrdavaa lpgfqfgnia 541 eenlsrslde vqltldkggr gevsaasqwq eahsplqvil qasllesggr pvtrrveqai 601 wpadtlpgir pqfaakavyd yrtdttvnqp ivdedsnaaf divyanaqge kkavsglqvr 661 lirerrdyyw nwsesegwqs qfdqkdlveg eqtldlnade tgkvsfpvew gayrlevkap 721 netvssvrfw agyswqdnsd gsgaarpdrv tlkldkanyr pgdtmklhia apvagkgyam 781 vessdgplww qaidvpaqgl eltipvdktw nrhdlylstl vvrpgdksrs atpkravgll 841 hlplgddnrr ldlalespak mrpnqpltvr vkasvkhgem pkqinvlvsa vdsgvlnitd 901 yatpdpwqaf fgqkrygadi ydiygqvieg qgrlaalrfg gdgddlkrgg kppvnhvnii 961 aqqaqpitln eqgegvvtlp igdfngelrv maqawtaddf grgeskvvva apviaelnmp 1021 rflaggdvsr lvldvtnltd rpqtlniala asgllellsq qpqpvnlapg vrttlfvpvr 1081 alegfgegei qatisglnlp getldaqhkq wqigvrpawp aqtvnsgial apgeswhvpe 1141 qhlanispat lqgqlllsgk pplnlaryir elkaypygcl eqttsglfpa lytnaaqlqs 1201 lgitgdsdek rraavdigis rilqmqrdng gfalwdenga eepwltayam dflirageqg 1261 ysvppeainr gnerllrylq dpgtmlirys dntqastfaa qayaalvlar qqkaplgtlr 1321 eiwerrsqaa sglplmqlgi alntmgdarr geeaitlaln tprqderqwi adygsslrdn 1381 almlslleen nlrpdaqnal lsslseqafg qrwlstqenn alflaahsrq asagawqvqt 1441 sleaqplsgd kaltrnldad qlaalevtnt gsqplwlrld ssgypssape pasnvlqier 1501 qilgtdgqrk slsslrsgel vlvwltvvad rnvpdalvvd llpaglelen qnladssasl 1561 pesgsevqnl lnqmqqadiq ymefrddrfv aavvvnegqp vtlvylarav tpgtyqlaqp 1621 qvesmyapqw ratgasegll ivtp