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LOCUS YP_026189 1520 aa linear CON 09-MAR-2022 MG1655]. ACCESSION YP_026189 VERSION YP_026189.1 DBLINK BioProject: PRJNA57779 BioSample: SAMN02604091 DBSOURCE REFSEQ: accession NC_000913.3 KEYWORDS RefSeq. SOURCE Escherichia coli str. K-12 substr. MG1655 ORGANISM Escherichia coli str. K-12 substr. MG1655 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (residues 1 to 1520) AUTHORS Riley,M., Abe,T., Arnaud,M.B., Berlyn,M.K., Blattner,F.R., Chaudhuri,R.R., Glasner,J.D., Horiuchi,T., Keseler,I.M., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Rudd,K.E., Serres,M.H., Thomas,G.H., Thomson,N.R., Wishart,D. and Wanner,B.L. TITLE Escherichia coli K-12: a cooperatively developed annotation snapshot--2005 JOURNAL Nucleic Acids Res. 34 (1), 1-9 (2006) PUBMED 16397293 REMARK Publication Status: Online-Only REFERENCE 2 (residues 1 to 1520) AUTHORS Hayashi,K., Morooka,N., Yamamoto,Y., Fujita,K., Isono,K., Choi,S., Ohtsubo,E., Baba,T., Wanner,B.L., Mori,H. and Horiuchi,T. TITLE Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110 JOURNAL Mol. Syst. Biol. 2, 2006 (2006) PUBMED 16738553 REFERENCE 3 (residues 1 to 1520) AUTHORS Blattner,F.R., Plunkett,G. III, Bloch,C.A., Perna,N.T., Burland,V., Riley,M., Collado-Vides,J., Glasner,J.D., Rode,C.K., Mayhew,G.F., Gregor,J., Davis,N.W., Kirkpatrick,H.A., Goeden,M.A., Rose,D.J., Mau,B. and Shao,Y. TITLE The complete genome sequence of Escherichia coli K-12 JOURNAL Science 277 (5331), 1453-1462 (1997) PUBMED 9278503 REFERENCE 4 (residues 1 to 1520) AUTHORS Arnaud,M., Berlyn,M.K.B., Blattner,F.R., Galperin,M.Y., Glasner,J.D., Horiuchi,T., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Riley,M., Rudd,K.E., Serres,M.H., Thomas,G.H. and Wanner,B.L. TITLE Workshop on Annotation of Escherichia coli K-12 JOURNAL Unpublished REMARK Woods Hole, Mass., on 14-18 November 2003 (sequence corrections) REFERENCE 5 (residues 1 to 1520) AUTHORS Glasner,J.D., Perna,N.T., Plunkett,G. III, Anderson,B.D., Bockhorst,J., Hu,J.C., Riley,M., Rudd,K.E. and Serres,M.H. TITLE ASAP: Escherichia coli K-12 strain MG1655 version m56 JOURNAL Unpublished REMARK ASAP download 10 June 2004 (annotation updates) REFERENCE 6 (residues 1 to 1520) AUTHORS Hayashi,K., Morooka,N., Mori,H. and Horiuchi,T. TITLE A more accurate sequence comparison between genomes of Escherichia coli K12 W3110 and MG1655 strains JOURNAL Unpublished REMARK GenBank accessions AG613214 to AG613378 (sequence corrections) REFERENCE 7 (residues 1 to 1520) AUTHORS Perna,N.T. TITLE Escherichia coli K-12 MG1655 yqiK-rfaE intergenic region, genomic sequence correction JOURNAL Unpublished REMARK GenBank accession AY605712 (sequence corrections) REFERENCE 8 (residues 1 to 1520) AUTHORS Rudd,K.E. TITLE A manual approach to accurate translation start site annotation: an E. coli K-12 case study JOURNAL Unpublished REFERENCE 9 (residues 1 to 1520) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-MAR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 10 (residues 1 to 1520) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (30-JUL-2014) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Protein update by submitter REFERENCE 11 (residues 1 to 1520) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (15-NOV-2013) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Protein update by submitter REFERENCE 12 (residues 1 to 1520) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (26-SEP-2013) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Sequence update by submitter REFERENCE 13 (residues 1 to 1520) AUTHORS Rudd,K.E. TITLE Direct Submission JOURNAL Submitted (06-FEB-2013) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA REMARK Sequence update by submitter REFERENCE 14 (residues 1 to 1520) AUTHORS Rudd,K.E. TITLE Direct Submission JOURNAL Submitted (24-APR-2007) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA REMARK Annotation update from ecogene.org as a multi-database collaboration REFERENCE 15 (residues 1 to 1520) AUTHORS Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (07-FEB-2006) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Protein updates by submitter REFERENCE 16 (residues 1 to 1520) AUTHORS Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (10-JUN-2004) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REMARK Sequence update by submitter REFERENCE 17 (residues 1 to 1520) AUTHORS Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (13-OCT-1998) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REFERENCE 18 (residues 1 to 1520) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (02-SEP-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA REFERENCE 19 (residues 1 to 1520) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (16-JAN-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAT48156. Changes to proteins and annotation made on March 7, 2022. Current U00096 annotation updates are derived from EcoCyc https://ecocyc.org/. Suggestions for updates can be sent to [email protected]. These updates are being generated from a collaboration that includes EcoCyc, the University of Wisconsin, UniProtKB/Swiss-Prot, and the National Center for Biotechnology Information (NCBI). COMPLETENESS: full length. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1520 /organism="Escherichia coli str. K-12 substr. MG1655" /strain="K-12" /sub_strain="MG1655" /db_xref="taxon:511145" Protein 1..1520 /product="putative lipoprotein YghJ" /calculated_mol_wt=167116 Region 106..1511 /region_name="SslE_AcfD_Zn_LP" /note="SslE/AcfD family lipoprotein zinc metalloprotease; NF037974" /db_xref="CDD:468296" CDS 1..1520 /gene="yghJ" /locus_tag="b4466" /gene_synonym="b2973; b2974; ECK2968; sslE" /coded_by="complement(NC_000913.3:3114550..3119112)" /transl_table=11 /db_xref="UniProtKB/Swiss-Prot:P0CK95" /db_xref="ASAP:ABE-0174096" /db_xref="ECOCYC:G7541" /db_xref="GeneID:2847716" CONTIG join(WP_001034469.1:1..1520) ORIGIN 1 mnkkfkykks llaailsatl lagcdgggsg sssdtppvds gtgslpevkp dptpnpeptp 61 eptpdpeptp epipdpeptp epepepvptk tgyltlggsq rvtgatcnge ssdgftfkpg 121 edvtcvagnt tiatfntqse aarslravek vsfsledaqe lagsddkksn avslvtssns 181 cpanteqvcl tfssvieskr fdslykqidl apeefkklvn eevennaatd kapsthtspv 241 vpvttpgtkp dlnasfvsan aeqfyqyqpt eiilsegrlv dsqgygvagv nyytnsgrgv 301 tgengefsfs wgetisfgid tfelgsvrgn kstialtelg devrganidq lihrysttgq 361 nntrvvpddv rkvfaeypnv ineiinlsls ngatlgegeq vvnlpnefie qfntgqakei 421 dtaicaktdg cnearwfslt trnvndgqiq gvinklwgvd tnyksvskfh vfhdstnfyg 481 stgnargqav vnisnaafpi lmarndknyw lafgekrawd knelayitea pslvepenvt 541 rdtatfnlpf islgqvgegk lmvignphyn silrcpngys wnggvnkdgq ctlnsdpddm 601 knfmenvlry lsddkwkpda kasmtvgtnl dtvyfkrhgq vtgnsaafdf hpdfagisve 661 hlssygdldp qempllilng feyvtqvgnd pyaiplradt skpkltqqdv tdliaylnkg 721 gsvlimenvm snlkeesasg fvrlldaagl smalnksvvn ndpqgypnrv rqqratgiwv 781 yerypavdga lpytidsktg evkwkyqven kpddkpklev aswledvdgk qetryafide 841 adhktedslk aakekifaaf pglkectnpa yhyevncley rpgtgvpvtg gmyvpqytql 901 slnadtakam vqaadlgtni qrlyqhelyf rtngrkgerl ssvdlerlyq nmsvwlwndt 961 syryeegknd elgfktftef lncyandaya ggtkcsadlk kslvdnnmiy gdgsskagmm 1021 npsyplnyme kpltrlmlgr swwdlnikvd vekypgavse egqnvtetis lysnptkwfa 1081 gnmqstglwa paqkevtiks nanvpvtvtv aladdltgre khevalnrpp rvtktyslda 1141 sgtvkfkvpy ggliyikgns stnesasftf tgvvkapfyk dgawkndlns paplgelesd 1201 afvyttpkkn lnasnytggl eqfandldtf assmndfygr dsedgkhrmf tyknlpghkh 1261 rftndvqisi gdahsgypvm nssfspnstt lpttplndwl iwhevghnaa etpltvpgat 1321 evannvlaly mqdrylgkmn rvadditvap eyleesnnqa warggagdrl lmyaqlkewa 1381 eknfdikkwy pdgtplpefy seregmkgwn lfqlmhrkar gdevsndkfg gknycaesng 1441 naadtlmlca swvaqtdlse ffkkwnpgan ayqlpgasem sfeggvsqsa yntlasldlp 1501 kpeqgpetin qvtehkmsae