linker nucleoporin [Candida albicans SC5314].

LOCUS       XP_718100                798 aa            linear   PLN 18-APR-2022
ACCESSION   XP_718100
VERSION     XP_718100.2
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
DBSOURCE    REFSEQ: accession XM_713007.2
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (residues 1 to 798)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (residues 1 to 798)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (residues 1 to 798)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (residues 1 to 798)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (residues 1 to 798)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (residues 1 to 798)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to AOW30316.
            
            On Dec 8, 2016 this sequence version replaced XP_718100.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Candida albicans SC5314"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     Protein         1..798
                     /product="linker nucleoporin"
                     /calculated_mol_wt=89012
     Region          81..>163
                     /region_name="Nup88"
                     /note="Nuclear pore component; pfam10168"
                     /db_xref="CDD:462975"
     Region          <635..>788
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..798
                     /gene="NUP82"
                     /locus_tag="CAALFM_C603900WA"
                     /coded_by="XM_713007.2:1..2397"
                     /note="Linker nucleoporin of the nuclear pore complex;
                     role in mRNA andexport from nucleus, protein import into
                     nucleus, ribosomal large subunit export from nucleus,
                     ribosomal small subunit export from nucleus; rat catheter
                     biofilm repressed"
                     /transl_table=12
                     /db_xref="CGD:CAL0000183573"
                     /db_xref="GeneID:3640261"
ORIGIN      
        1 mppigssdqf ihqitqqfvf qrlwtgnatt pelapastpy nrlvcrnntd lfyatgnivr
       61 cctispnhkn yklfkvenqf yevasllmnk sgtllaiige eqvdvvslpt nvmkssgiyv
      121 dgasfkiknl rgkvrkcvwq tvaandstlv vltdnsqiqa ydltkslevp vidvdlkrya
      181 nfaneeaisi afgssknlag gltlyvstls niyaiypfsa kfgnlattke aidialedtk
      241 aameliqeky pvnlldtats tlnkaairqf eyyshfksql sgalpiikev rdthtnnpye
      301 lfvvsqtlsd wtgyslqgpl issnagikdl asigdndlvs ilasidanat vtyyaqlapm
      361 lmkynimsta segapsessq tvckpkyvkp krgfgfidns eeeekalvks kqsqesfwke
      421 eltsldllqr dklpvdendd atgfptffge idsnrfsvcv nsnklvlvdc swvktfvddl
      481 kedkidsvsi stnygiaste kepitafayi kddvtstgey ltvcrsklvn dmeviqivdk
      541 vvsdqdeats tlllteepyk elpltyipsk pfseleeele slgkinigad vkgnedlnsl
      601 tvdslsslns lsvrtiqvas sytifgiklq srilanldsl keqlhilekv kneydgdqkd
      661 htekleklte kqaklderii klqqkifdgl nkfkqdktlp iseaernwfk einsinalvn
      721 sstdnevglt kkienlslqv hsiiedsgke kkpkltaveq lelekrlskl knwlqredks
      781 ieilkdkltn slkligdk