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LOCUS XP_716738 1229 aa linear PLN 18-APR-2022 SC5314]. ACCESSION XP_716738 VERSION XP_716738.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 DBSOURCE REFSEQ: accession XM_711645.2 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (residues 1 to 1229) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (residues 1 to 1229) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (residues 1 to 1229) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (residues 1 to 1229) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (residues 1 to 1229) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (residues 1 to 1229) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AOW30095. On Dec 8, 2016 this sequence version replaced XP_716738.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on the carboxy end. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1229 /organism="Candida albicans SC5314" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" Protein 1..>1229 /product="DNA-directed DNA polymerase gamma" Region 108..433 /region_name="DNApol_Exo" /note="DNA mitochondrial polymerase exonuclease domain; pfam18136" /db_xref="CDD:465664" Region 661..1035 /region_name="DNA_pol_gammaA" /note="Pol gammaA is a family A polymerase that is responsible for DNA replication and repair in mitochondria; cd08641" /db_xref="CDD:176478" Site order(673,677,680..681,726..728,730,732..735,767..768,805, 819,823,927,934,965..967) /site_type="active" /db_xref="CDD:176478" Site order(673,677,680..681,726..728,730,732..735,831,926..927, 930,934,965..967) /site_type="DNA binding" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:176478" Site order(767..768,770,805,819,823,967) /site_type="active" /note="catalytic site [active]" /db_xref="CDD:176478" CDS 1..1229 /locus_tag="CAALFM_C601550CA" /coded_by="XM_711645.2:1..>3688" /note="Ortholog(s) have 3'-5' exonuclease activity, DNA-directed DNA polymerase activity, role in mitochondrial DNA replication and mitochondrion localization" /transl_table=12 /db_xref="CGD:CAL0000176297" /db_xref="GeneID:3641653" ORIGIN 1 msnrrlllrg itrshrsfvt slrrrqqqqq qqqssqqlqq qhplqqftee prvnqlgiqy 61 lsndlhkkvf pttstkdyls pqhpqlleis kkhlqenell gkktqitepi tiknfpslvg 121 ksmdehfnkl gqkssdpyla matnflkkel pckppksqwk fqsgwtrytk dgnppeqvpy 181 pledtlvfdv evmykisnyp vmatcasnea wyswvspall dwekqknnsi ttdqidwnhl 241 ipmncakkpk viigynvsyd rarileeyni kqtkafyldg mslhvatsgi csrqrpkwak 301 ynkvkklsqe dvdeiegtme eeeeeegems qelgqlsses ndvsdyakll sdgfqvavel 361 evaddpwllm gapnslanva rfhcnihldk tdrdyfated pnlvidnfpk lmdycakdvd 421 atfevtkklf pvfiqriphp vsfaalrllg tlilptttkw pkyieaaesl yesnrqevat 481 tlqqlandlv ahiqnkkqvk pdyendpwls qlnwklketr lkkdgtpykk taymtgypew 541 yrelfktskg eemnltlktr itplllrlkw eghplfwvds qgwcfkvpfd ddneiarlte 601 kkyvqpklte eelmetrdal ltkgksyvlf kvphpngpss rcthilskly vrnfedgtlt 661 seydyatkil nlnneasywl gnrnrikdqf vvynqqgknk ffdtikkske hssmgiiipn 721 latmgtitrr atentwltas nakknrigse lkslveapkg ycfvgadvds eelwiaslvg 781 dsmlqihggt algwmtlege ksqktdlhsk tasilgisrn dakvfnygri ygagvkfatr 841 llkqfnanit deeadkvarq lydstkgrta vskylpsriy yggtesimfn aleaiaqqee 901 pktpvlgasi tdalnvknln tnqymtsrvn wtiqssgvdy lhlliismey liekygidar 961 laitvhdelr ylvketdkyk aalllqisni wtramfceql gikevpqsca ffsevdidhv 1021 lrkevsmdcv tpsnptpipl geslnigqll skcqhgdila dkntkpltlr ttkysprqpi 1081 inqldknlti aekiakielq tsidkdewkk nlynlakvsr nkqngknnst ekpqrvikrk 1141 piveydlqed nnkkreikyk kdppkskiat tttttttkka ssnnsktksn vkvdesksam 1201 tildlktdqq rptynnrkiv yignpqskl