Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

uncharacterized protein CAALFM_C601920CA, partial [Candida albicans


LOCUS       XP_713817                516 aa            linear   PLN 18-APR-2022
            SC5314].
ACCESSION   XP_713817
VERSION     XP_713817.2
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
DBSOURCE    REFSEQ: accession XM_708724.2
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (residues 1 to 516)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (residues 1 to 516)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (residues 1 to 516)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (residues 1 to 516)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (residues 1 to 516)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (residues 1 to 516)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to AOW30128.
            
            On Dec 8, 2016 this sequence version replaced XP_713817.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Candida albicans SC5314"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     Protein         1..>516
                     /product="uncharacterized protein"
     Region          5..133
                     /region_name="CID_Pcf11"
                     /note="CID (CTD-Interacting Domain) of Pcf11; cd16982"
                     /db_xref="CDD:340779"
     Site            order(20..21,23,61,64..65,68..69,100,104,107)
                     /site_type="other"
                     /note="CTD binding site [polypeptide binding]"
                     /db_xref="CDD:340779"
     Region          390..458
                     /region_name="CFIA_Pcf11"
                     /note="Subunit of cleavage factor IA Pcf11; pfam11526"
                     /db_xref="CDD:431919"
     CDS             1..516
                     /locus_tag="CAALFM_C601920CA"
                     /coded_by="XM_708724.2:1..>1548"
                     /note="Putative transcription factor with zinc finger
                     DNA-binding motif; heterozygous null mutant exhibits
                     hypersensitivity to parnafungin and cordycepin in the C.
                     albicans fitness test"
                     /transl_table=12
                     /db_xref="CGD:CAL0000175209"
                     /db_xref="GeneID:3644534"
ORIGIN      
        1 mtdileaykq slseltfnsr piidnltiia kenpnvadgi vdlitqriyk tipdqklfal
       61 ylldsickii gnpynilagd eifnlyshvf qlvnetirnk lvnlfetwki tktrgtndpl
      121 fpkaqldkid sflkkagypk aktnsgvmsq qslvndinql ipifekkvrt npnsksqdrl
      181 ralnqlrsil ssqvmkanel qaiqnqlqni keqelsssss saskggtpip tpgptpattp
      241 gpssippvsr vnpafmifnd lvlsglvkkd qepipgskpv yslvfpqtky vpsasglgsn
      301 stledlllss ssiqrsdydk lkftemvkvs klsfnnlqdf iknnkpttkl rdllydskps
      361 kcsicgkrfa sdkegadkkr lhldwhfrin kklsnkgsnv qsrnwylddy ewvhfnendl
      421 leystdvrip ditqemdeti stdsqyvivp stetnmnnkc licreqikat yndeigewcw
      481 yncirqpgep knsrkivhvt cynesskkrp adnddl