Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

Candida albicans SC5314 uncharacterized protein (CAALFM_C601920CA),


LOCUS       XM_708724               1548 bp    mRNA    linear   PLN 18-APR-2022
            partial mRNA.
ACCESSION   XM_708724
VERSION     XM_708724.2
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 1548)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (bases 1 to 1548)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 1548)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (bases 1 to 1548)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_032094).
            
            On Dec 8, 2016 this sequence version replaced XM_708724.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Candida albicans SC5314"
                     /mol_type="mRNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     gene            <1..>1548
                     /locus_tag="CAALFM_C601920CA"
                     /db_xref="GeneID:3644534"
     CDS             1..>1548
                     /locus_tag="CAALFM_C601920CA"
                     /note="Putative transcription factor with zinc finger
                     DNA-binding motif; heterozygous null mutant exhibits
                     hypersensitivity to parnafungin and cordycepin in the C.
                     albicans fitness test"
                     /codon_start=1
                     /transl_table=12
                     /product="uncharacterized protein"
                     /protein_id="XP_713817.2"
                     /db_xref="CGD:CAL0000175209"
                     /db_xref="GeneID:3644534"
                     /translation="MTDILEAYKQSLSELTFNSRPIIDNLTIIAKENPNVADGIVDLI
                     TQRIYKTIPDQKLFALYLLDSICKIIGNPYNILAGDEIFNLYSHVFQLVNETIRNKLV
                     NLFETWKITKTRGTNDPLFPKAQLDKIDSFLKKAGYPKAKTNSGVMSQQSLVNDINQL
                     IPIFEKKVRTNPNSKSQDRLRALNQLRSILSSQVMKANELQAIQNQLQNIKEQELSSS
                     SSSASKGGTPIPTPGPTPATTPGPSSIPPVSRVNPAFMIFNDLVLSGLVKKDQEPIPG
                     SKPVYSLVFPQTKYVPSASGLGSNSTLEDLLLSSSSIQRSDYDKLKFTEMVKVSKLSF
                     NNLQDFIKNNKPTTKLRDLLYDSKPSKCSICGKRFASDKEGADKKRLHLDWHFRINKK
                     LSNKGSNVQSRNWYLDDYEWVHFNENDLLEYSTDVRIPDITQEMDETISTDSQYVIVP
                     STETNMNNKCLICREQIKATYNDEIGEWCWYNCIRQPGEPKNSRKIVHVTCYNESSKK
                     RPADNDDL"
     misc_feature    13..399
                     /locus_tag="CAALFM_C601920CA"
                     /note="CID (CTD-Interacting Domain) of Pcf11; Region:
                     CID_Pcf11; cd16982"
                     /db_xref="CDD:340779"
     misc_feature    order(58..63,67..69,181..183,190..195,202..207,298..300,
                     310..312,319..321)
                     /locus_tag="CAALFM_C601920CA"
                     /note="CTD binding site [polypeptide binding]; other site"
                     /db_xref="CDD:340779"
     misc_feature    1168..1374
                     /locus_tag="CAALFM_C601920CA"
                     /note="Subunit of cleavage factor IA Pcf11; Region:
                     CFIA_Pcf11; pfam11526"
                     /db_xref="CDD:431919"
ORIGIN      
        1 atgacagaca ttttggaagc atacaaacaa agcttgtctg agttaacatt taattcacgt
       61 ccaataattg ataatttaac tataatagca aaagagaatc caaatgttgc cgatggaatc
      121 gtcgatttaa taactcaacg aatttataaa actattccag accagaaatt atttgcattg
      181 tatttactag attctatatg caaaattatt ggtaaccctt ataacatatt agctggagat
      241 gagattttta atttatattc tcatgtattt caattagtca acgagacaat tcgtaacaag
      301 ttggtgaact tgtttgaaac atggaaaata accaaaacaa gaggtaccaa tgacccttta
      361 tttccgaaag cacaattaga taaaatagat tcatttttga agaaggcagg gtacccgaag
      421 gccaaaacaa actcgggtgt aatgtcccaa caatccctag tgaacgatat taaccaatta
      481 attcctattt tcgaaaaaaa agtacgaact aacccaaact ccaagtcaca agatagactt
      541 cgggcattaa atcaattaag atcaatactt tctagccaag tgatgaaagc taatgaatta
      601 caggctattc aaaatcaact acaaaacatt aaggagcaag aactctcatc gtcatcttct
      661 tcagcatcaa aaggtggcac ccctattcct accccaggac caactcctgc cactacgccg
      721 ggaccctctt cgattccacc tgtgtctagg gtgaacccgg cattcatgat attcaatgat
      781 ttggttcttt cagggttggt taaaaaggat caagaaccaa tccctggatc taaaccagtt
      841 tactcgttgg tttttccaca aaccaaatat gtaccatcag caagtggtct cggctctaat
      901 agtactttag aagatttatt gttatctagt agttcaatac aaagatctga ttatgataaa
      961 ttgaagttta cggaaatggt taaggttagt aaattgtctt tcaacaattt gcaagacttt
     1021 attaaaaata ataaacctac aacaaaattg cgtgatttgc tttatgattc aaaaccatcc
     1081 aaatgttcaa tttgtggtaa aagatttgca tctgataaag aaggggcaga taaaaagaga
     1141 ttacatttag attggcattt tagaatcaac aagaagctct ctaataaagg cagtaatgtt
     1201 caatctcgaa attggtatct agatgattat gaatgggttc attttaatga aaacgatctt
     1261 ttggagtatt cgacagatgt aagaatacca gatattactc aggaaatgga tgaaactatt
     1321 tcaaccgata gccaatacgt gattgttcca tcaacagaaa caaatatgaa caataaatgc
     1381 ttaatctgtc gtgagcaaat caaggctact tataatgatg aaattggaga atggtgctgg
     1441 tacaattgta ttagacaacc tggagagcct aaaaatagca gaaaaattgt ccatgtcact
     1501 tgttataatg aatccagcaa gaagagacca gcggacaatg atgatttg