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LOCUS XP_712507 939 aa linear PLN 18-APR-2022 ACCESSION XP_712507 VERSION XP_712507.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 DBSOURCE REFSEQ: accession XM_707414.2 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (residues 1 to 939) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (residues 1 to 939) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (residues 1 to 939) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (residues 1 to 939) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (residues 1 to 939) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (residues 1 to 939) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AOW30161. On Dec 8, 2016 this sequence version replaced XP_712507.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## Method: conceptual translation. FEATURES Location/Qualifiers source 1..939 /organism="Candida albicans SC5314" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" Protein 1..939 /product="coatomer subunit beta'" /calculated_mol_wt=106033 Region 13..296 /region_name="WD40" /note="WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from...; cd00200" /db_xref="CDD:238121" Region 19..53 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:293791" Site order(30,34,40..41,53..54,72,76,82..83,95..96,113,118, 124..125,139,157,162,168..169,181..182,203,207,213..214, 226..227,244,249,255..256,268..269,287,291) /site_type="active" /note="structural tetrad [active]" /db_xref="CDD:238121" Region 59..95 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:293791" Region 100..137 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:293791" Region 144..180 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:293791" Region 187..225 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:293791" Region 231..269 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:293791" Region 275..296 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:293791" Region 303..848 /region_name="Coatomer_WDAD_beta-like" /note="Coatomer WD Associated Region from Coatomer Subunit Beta and Beta'; cd22947" /db_xref="CDD:438572" Region 303..346 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:438572" Region 352..386 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:438572" Region 392..428 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:438572" Region 434..467 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:438572" Region 471..539 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:438572" Region 545..585 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:438572" Site order(579,609,774..776,803..804,825..826,829) /site_type="other" /note="coatomer beta'-subunit binding site [polypeptide binding]" /db_xref="CDD:438572" Region 586..610 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:438572" CDS 1..939 /gene="SEC27" /locus_tag="CAALFM_C602260CA" /coded_by="XM_707414.2:1..2820" /note="Ortholog(s) have ubiquitin binding activity" /transl_table=12 /db_xref="CGD:CAL0000201645" /db_xref="GeneID:3645870" ORIGIN 1 mkldvvkqfs trsdrvkgid fhptepwilt tlyngkieiw syatnslvks iqvtelpvra 61 gkfiarknwi vvgsddfqir vynyntgekv tqfeahpdyi rsiavhpskp yiltssddlt 121 iklwnwdhnw kleqtfeghq hyvmsvnfnp kdpntfasac ldrtvkiwsl gssqpnftli 181 aheakgvnyv dyypqadkpy litssddkti kvwdyqtksc vatleghlsn vsfaifhpel 241 piivsgsedg tirfwnsntf kleksinysl erawcigilp ksnviaagfd sgfviiklgs 301 eeplfsmdsn nkliyaknse vyqsvikpss seglkdgesl nlqqrdlgsi eifpqtlnhs 361 pngryaavcg dgeyivytal awrsksygsa ldfvwnshds saacpfaire sgvsvkifkn 421 fqeyltldli yqadkiftgs llgvksegci sfydwehgkl vrrvdldddi idviwsdnge 481 llaivttsnl geisstvgvk knnetyflsy nhelfeeala ngeldaeega esafdvlytl 541 ptsesilsgk figdvfvytt gttnrlnyfv ggevinlghf drkfyiigyk atdgklylid 601 ksfdvvswyv naevlelqtl vmrgdleqfa tqnivvekeh gengeveeee vpdlstitle 661 nlseeysqli srftktelnq lsrffeklgy lalsfslsqd fdskfqlsls tgnlkqaydl 721 lsaqeketps lslanstkwk klgdlalnkw niklaqesfw lakdysslll llsstqnksq 781 liklaevces kgkyniawqs wwlvgdvgkc fdllitsery teavifgkny gvdpeklika 841 ielwkqtlhk knkskvanrl iddfsnlqtn gstgaplidl eskqdkdqet ttqpqqeake 901 kiedeagase vqreevenve aeiqqddevt aeeeeeeda