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LOCUS XP_712410 1425 aa linear PLN 18-APR-2022 ACCESSION XP_712410 VERSION XP_712410.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 DBSOURCE REFSEQ: accession XM_707317.2 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (residues 1 to 1425) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (residues 1 to 1425) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (residues 1 to 1425) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (residues 1 to 1425) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (residues 1 to 1425) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (residues 1 to 1425) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AOW30366. On Dec 8, 2016 this sequence version replaced XP_712410.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## Method: conceptual translation. FEATURES Location/Qualifiers source 1..1425 /organism="Candida albicans SC5314" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" Protein 1..1425 /product="Tsm1p" /calculated_mol_wt=161747 Region 40..643 /region_name="M1_like_TAF2" /note="TATA binding protein (TBP) associated factor 2; cd09839" /db_xref="CDD:341074" Site order(224,244,246,251,254,456,459,479..481,533..534, 537..538,540..541,543..544,547,553,641) /site_type="other" /note="intramolecular interface [polypeptide binding]" /db_xref="CDD:341074" Site order(591..592,595,599,603,626) /site_type="other" /note="oligomer interface [polypeptide binding]" /db_xref="CDD:341074" CDS 1..1425 /gene="TSM1" /locus_tag="CAALFM_C604500CA" /coded_by="XM_707317.2:1..4278" /note="Putative transcription initiation factor TFIID subunit; transcript is upregulated in clinical isolates from HIV+ patients with oral candidiasis; Nrg1-regulated" /transl_table=12 /db_xref="CGD:CAL0000192999" /db_xref="GeneID:3645953" ORIGIN 1 mpsasnhgtp rmvgglintp larhinakkv vnpviqsfkv ahqrvnidid lssnsidgft 61 eltviptsnk lkvikldcre meikdvling srslnyvydd llyinnpeyf ehcidskvin 121 vmdlysdtfn vhqhhlirsk ldyifknpkh deesldyntq elkillpdnm kfeltdinsi 181 qtpsgtshpg tttpshlksk gtgneyyytp iqlkvvykvk npqngvnfvt nediekklwh 241 ayttnsnynv stsswvpcid dlssrctwsl evniprtlkd ignprmigsk ealdyqqmrr 301 krsgeaiqnf aqqnndsddd ddddedigny dmvvpsgdfn nvketphpid lskkvvswsi 361 fnpvcahhvg wavgcfesfv lsdesagake ddeedtvlrg ddaenvnnpv tiyslpedve 421 wakntsiitn kaldffskey gsfpfssyai vfvryspcqt snfaglsvms skllyppdmi 481 epmftvtdil lksiatqwag inispqtfnd mwctigiagf maisfikklm ganefryrlr 541 kqmdkvvaed vgrhaiasqp fkypvseddl sfvwlkspiv lfildnrmtk tdksfglsrv 601 lpklflqams gslpngtlnt ehfryvcekv nrnklenffk qwvfgagapv frisqrfnkk 661 kgmiemnirq vqhhertpkk ldsssfigda vayldneplp pqqhvftgpm tirvhesdgs 721 pyehivelke antkldiqyn skfrkikkkd dgvdpgiafn qfgdvllsha emqewnlrdw 781 dkrdeeslss epfewirgdv dfewiaridi kqpdfmfgsq lvydrdieaq leavryfgel 841 ektnttycta ltrtlmddry fygvriaaaq aladcsnean nfigleyllk afgklycfdd 901 sfipksndfs dfrsfmlqsa fprilcgvkd ndgkvpkriq nlllnlvkfn dnsmnafvds 961 lyvselvvsl vtstvsgwrn dieeyndtef agkvsselfr lqkldrwips yqniievtci 1021 qqnirmalvg arklsfeell ymtldkypme arveafrgil elgglknksi lqyflkvcll 1081 nferplyrsk liealvksvs svatyggvst lddpefhtkv dtnvksssnr iiiddgsqdn 1141 lamkskrddm arasikgaie ilrrdfsegq glretlwell htsliglher rsifclcqvl 1201 fkgvdsyvvk lpvpsmpvee yvrkkivakv snypgqvtik regrfkiqla trksviakvk 1261 setehkplki slkpvieakq kaasavhvdp viptkvtfkl pghrlagfak kveldgtlvt 1321 iklgrdmksk vdalahryvr intkrrkiev skvpfiekee gsntsgitev srntgekeda 1381 kspspilvkk ekkrpkvyih fggnvkkpdq gsssssskeg steve