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LOCUS XP_712309 806 aa linear PLN 18-APR-2022 ACCESSION XP_712309 VERSION XP_712309.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 DBSOURCE REFSEQ: accession XM_707216.2 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (residues 1 to 806) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (residues 1 to 806) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (residues 1 to 806) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (residues 1 to 806) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (residues 1 to 806) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (residues 1 to 806) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AOW29980. On Dec 8, 2016 this sequence version replaced XP_712309.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## Method: conceptual translation. FEATURES Location/Qualifiers source 1..806 /organism="Candida albicans SC5314" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" Protein 1..806 /product="ubiquitin ligase complex subunit" /calculated_mol_wt=92160 Region <86..207 /region_name="TPR" /note="TPR repeat [General function prediction only]; COG0790" /db_xref="CDD:440553" Region 117..147 /region_name="SLR repeat" /note="SLR repeat [structural motif]" /db_xref="CDD:276807" Region 156..185 /region_name="SLR repeat" /note="SLR repeat [structural motif]" /db_xref="CDD:276807" Region 291..339 /region_name="SLR repeat" /note="SLR repeat [structural motif]" /db_xref="CDD:276807" Region <330..560 /region_name="TPR" /note="TPR repeat [General function prediction only]; COG0790" /db_xref="CDD:440553" Region 383..412 /region_name="SLR repeat" /note="SLR repeat [structural motif]" /db_xref="CDD:276807" Region 419..492 /region_name="SLR repeat" /note="SLR repeat [structural motif]" /db_xref="CDD:276807" Region <499..631 /region_name="TPR" /note="TPR repeat [General function prediction only]; COG0790" /db_xref="CDD:440553" Region 499..528 /region_name="SLR repeat" /note="SLR repeat [structural motif]" /db_xref="CDD:276807" Region 545..574 /region_name="SLR repeat" /note="SLR repeat [structural motif]" /db_xref="CDD:276807" Region 584..613 /region_name="SLR repeat" /note="SLR repeat [structural motif]" /db_xref="CDD:276807" CDS 1..806 /locus_tag="CAALFM_C600310WA" /coded_by="XM_707216.2:1..2421" /note="Ortholog(s) have ubiquitin-protein transferase activity and role in ER-associated ubiquitin-dependent protein catabolic process, retrograde protein transport, ER to cytosol" /transl_table=12 /db_xref="CGD:CAL0000187118" /db_xref="GeneID:3646071" ORIGIN 1 mivhyiilsl wsllvlastn ndehytqavi gleqlarnft rpnvynidni egnlyipqfd 61 qltndykskq ekpqpplelt rriipllkks asesrnvnal vtlgdlylfg nysltpdyym 121 akeyyqeavs lapnghayfm lgyiystglf gtfpvdqerg vlyyqfaven gdrnaqmvma 181 yknfkglgvp kncelaleyy tdlveqgkdw mskndadgqv dynirisdfn gglygekmse 241 ttstieirsk yfkdlrnsfe eykltanehe yatlfynale sykgdyfvpk nltkafltfq 301 ecvdlgeeiy gasdyknidg idkmflsscq sklgrmylkg mgvsnntkka kqildrslkv 361 qgtpealnll gfiedqgllg epnvtkavdy yvaaikkkss eanrnlakll mrmnggdpht 421 sehhkeiyty mkdavyhrdt ealyymgsfl qsglskiads kndiscpniv myyrvflerl 481 ssfyaphlkf afeeliagny qnaligysia aehgfeeaqi saayllyqlq plyskqppkt 541 fvpervemav dyleraskqs nvdatillgd lysgqagash itpdfdrafn yyrtaaeres 601 shgayklaem yeygigpann svdyfmakry ydfslkynem lnhaksesps qfvsgkthid 661 wallrlrlky lfnrsaskqs gnsdggwlsa fkkvgnrvpn evpqdsnsis ranahheggt 721 ynddlieeyd igdylviamt fifffvffvq nilrqfrrmr ngqrrdeann nnnngddndd 781 nqgqngwngn qfhfkrgnfe fhffai