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LOCUS XP_712107 383 aa linear PLN 18-APR-2022 ACCESSION XP_712107 VERSION XP_712107.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 DBSOURCE REFSEQ: accession XM_707014.2 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (residues 1 to 383) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (residues 1 to 383) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (residues 1 to 383) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (residues 1 to 383) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (residues 1 to 383) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (residues 1 to 383) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AOW30354. On Dec 8, 2016 this sequence version replaced XP_712107.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## Method: conceptual translation. FEATURES Location/Qualifiers source 1..383 /organism="Candida albicans SC5314" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" Protein 1..383 /product="RNA export factor" /calculated_mol_wt=41836 Region 36..345 /region_name="WD40" /note="WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from...; cl29593" /db_xref="CDD:475233" Region 41..79 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:293791" Site order(53,57,63..64,79..80,98,102,108..109,120..121,142, 147,153..154,167,181,186,192..193,203..204,226,230, 272..273,285..286,303,308,314..315,327..328) /site_type="active" /note="structural tetrad [active]" /db_xref="CDD:238121" Region 85..120 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:293791" Region 125..165 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:293791" Region 171..205 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:293791" Region 212..251 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:293791" Region 290..316 /region_name="WD40 repeat" /note="WD40 repeat [structural motif]" /db_xref="CDD:293791" CDS 1..383 /gene="GLE2" /locus_tag="CAALFM_C604360CA" /coded_by="XM_707014.2:1..1152" /note="Putative nuclear pore complex; possibly an essential gene, disruptants not obtained by UAU1 method; rat catheter biofilm repressed" /transl_table=12 /db_xref="CGD:CAL0000190268" /db_xref="GeneID:3646293" ORIGIN 1 msflgssstg tsttatssav tgqellndit innppedsie disfspqqdl lavaswdkkv 61 riyeidpnsg nnmgramyeh eapvfssrws idgtkiisgg adnqvkifdl atqqaqqigq 121 hdsavksvry vecgptntqv vasgswdktl kywdmrspqp vstinlperv ysmdnsqkll 181 vvgcadrhis iidlnnpqqi fkssqsplkw qtrcvscypq angfavgsie grcaiqyite 241 neqkkfgfsf kchrksggnt tgttnttgga gaglrttsss naneshaysv naisfhpiyg 301 tfstagsdgt fcfwdkdakq rlksfpelpg aisatafnkt gtifayaisy dwslgymgnr 361 qdypniiklh atkdleikqk nkr