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LOCUS XP_712099 622 aa linear PLN 18-APR-2022 ACCESSION XP_712099 VERSION XP_712099.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 DBSOURCE REFSEQ: accession XM_707006.2 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (residues 1 to 622) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (residues 1 to 622) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (residues 1 to 622) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (residues 1 to 622) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (residues 1 to 622) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (residues 1 to 622) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AOW30347. On Dec 8, 2016 this sequence version replaced XP_712099.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## Method: conceptual translation. FEATURES Location/Qualifiers source 1..622 /organism="Candida albicans SC5314" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" Protein 1..622 /product="uncharacterized protein" /calculated_mol_wt=66954 Region 58..201 /region_name="NTF2" /note="Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many...; cd00780" /db_xref="CDD:238403" Site order(83,89,121,147,150..151,160,182,194..196,198,200) /site_type="active" /note="TAP/p15 interaction [active]" /db_xref="CDD:238403" Site order(87,89,93,144..145,147,150..151,158,162..164,168, 170..173,176,182,194..196,198..201) /site_type="other" /note="dimer interface [polypeptide binding]" /db_xref="CDD:238403" Site order(93..94,134,139,163,165,167..168,170,173,197,199,201) /site_type="active" /note="RanGDP-NTF2 interaction [active]" /db_xref="CDD:238403" Region 480..540 /region_name="RRM_SF" /note="RNA recognition motif (RRM) superfamily; cd00590" /db_xref="CDD:409669" CDS 1..622 /locus_tag="CAALFM_C604290WA" /coded_by="XM_707006.2:1..1869" /note="Ortholog(s) have mRNA binding activity and role in protein deubiquitination, regulation of ER to Golgi vesicle-mediated transport, regulation of retrograde vesicle-mediated transport, Golgi to ER, ribophagy" /transl_table=12 /db_xref="CGD:CAL0000181939" /db_xref="GeneID:3646280" ORIGIN 1 mttattkttt tttnanvnan qpqpadkssa tpsttpsatg tpkpsatqvq lsqdrasnig 61 wffiksyydf fiskldeihk iyhphasinh dafpgtkndk sdsgasndnv kdvlpiayka 121 kgtdaiketf skhlslrknn rivitsacfe vslekniiiv vfgewssnde pykqftqtfv 181 lvpgktdnty dvandilkfv singykekhe qkreqevkas sqtavngngs stttnnnnnn 241 nnsntsvtkk ptvtttgsep vtkvttestp ktsglkpess kkdvatngev kkedfektqp 301 iksdvkvenq eekqekisnt dkeltkddsv nkqsnessvt tttsttqnsk pvvtkneesk 361 eekapstkee tkqptvkkpq peptkpnaaa aappqqqqqp ltwaalaqqa vpikqttkss 421 gsssavakpv sagsssgatp tvkksvtsfs sinnsttspg qhgsnggggg kfrkedwypi 481 yirgirslde kelkdhlskk fgelkffkvn qnialvdfvh qeaqrkalda kettldgvtf 541 alepresktg nnfhnnsgnn nnsnnggyrk fsgsgsgsgg gggqskegsg sggsaknkdk 601 fdnkkingsg nkknlnkaps fk