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LOCUS XP_710836 1660 aa linear PLN 18-APR-2022 ACCESSION XP_710836 VERSION XP_710836.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 DBSOURCE REFSEQ: accession XM_705744.2 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (residues 1 to 1660) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (residues 1 to 1660) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (residues 1 to 1660) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (residues 1 to 1660) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (residues 1 to 1660) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (residues 1 to 1660) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AOW30147. On Dec 8, 2016 this sequence version replaced XP_710836.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on the carboxy end. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1660 /organism="Candida albicans SC5314" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" Protein 1..>1660 /product="clathrin heavy chain" Region 335..357 /region_name="Clathrin-link" /note="Clathrin, heavy-chain linker; pfam09268" /db_xref="CDD:462732" Region 359..422 /region_name="Clathrin_H_link" /note="Clathrin-H-link; pfam13838" /db_xref="CDD:463995" Region 546..677 /region_name="CLH" /note="Clathrin heavy chain repeat homology; smart00299" /db_xref="CDD:128594" Region 688..826 /region_name="CLH" /note="Clathrin heavy chain repeat homology; smart00299" /db_xref="CDD:128594" Region 835..972 /region_name="Clathrin" /note="Region in Clathrin and VPS; pfam00637" /db_xref="CDD:459884" Region 981..1123 /region_name="Clathrin" /note="Region in Clathrin and VPS; pfam00637" /db_xref="CDD:459884" Region 1130..1269 /region_name="Clathrin" /note="Region in Clathrin and VPS; pfam00637" /db_xref="CDD:459884" Region 1276..1418 /region_name="CLH" /note="Clathrin heavy chain repeat homology; smart00299" /db_xref="CDD:128594" Region 1425..1568 /region_name="Clathrin" /note="Region in Clathrin and VPS; pfam00637" /db_xref="CDD:459884" CDS 1..1660 /gene="CHC1" /locus_tag="CAALFM_C602120WA" /coded_by="XM_705744.2:1..>4980" /note="Clathrin heavy chain; subunit of the major coat protein; role in intracellular protein transport and endocytosis; flow model and rat catheter biofilm repressed" /transl_table=12 /db_xref="CGD:CAL0000192308" /db_xref="GeneID:3647552" ORIGIN 1 msndipidft eltqltelgi pqtsldfkst tlesdhyicv resgaqgntv aivnlknnne 61 vtrknmtadn aimhpkefvi slrangttlq ifnlgskqrl kaftmdqpvi fwkwlddtyl 121 glvtqssiyy wnvfdgtnng ptkltdrhht lnncqiinfv aepdlnwfav tgiaqedgri 181 aghiqlysks rnvsqaiegh vckfasisls ggvqptkvfc vgnknaqgqg nmhiieidhv 241 dgnpqfqkkv vdiffppdas ndfpislqas nkygivyvlt kygfihlydm etganlfvnr 301 itadpvftas syndgtglit inkagqvlsv evsrdkiipy vldklsnvpl alalssrggf 361 pgaenlfqqq fqtylnqgdy snaakvaass eqlrtqdtin klknitpqpg qispilqyfs 421 tlldrgtlnk fesielakpv lqqdrkplfe kwlkedklts seelgdivks yndttlalav 481 yiranvnikv vsclaelgqf dkilpycqkv gynpdytnli qnlvrvnpdk asefatslls 541 spdanlnveq iadlffsqny iqqgtaflld alkndtpaeg hlqtkvlein llhapqvada 601 ilgnqmfshy dkptigklce ksglfqrale hyddlkdikr vivhtnvlps dwlvsyfgql 661 nvdqsvacik ellsnnmqqn lqvviqvatk ysdligaakl ikifeeykct eglyyylssi 721 vnltqdpdvv fkyiqaaarm nqtkeiervv rdnnvyngek vknflkefkl ddqlpliivc 781 drfnfvhdli lylyknqyfk fievyvqsvn pantpqvvag vldvdcdeni ikgllmsvlg 841 rvpikelvee vekrnrlkil lpflektleg gsndqevynt lakiyidsnn spekflqenn 901 nydtlvvgky cekrdpylay isyskggndd qlisitnenk mykyqaryll sksdielwnk 961 vlssdnihrr qlvdqvistg ipelddpepi sitvkafmen dlpeelmell ekiilepspf 1021 senaslqglm iltaikadss kvssyiekld kfdpneiapl cidnglneea fevydkfelr 1081 seamkvlved ivsldraeqy aekydtpelw yqlgtaqldg lripeaidsy vksknpenfa 1141 qvieiaehag keeelitfld maretlrepv vdgalinaya tldrlsdmek fvggsnvadl 1201 eaigdklfea knykgakily snvskyskla ttlvylgdyq gavdcarkas ntqvwkqvns 1261 acienkefrl aqicglnlii daeelpelvk tyeyngyfne lialfengls lerahmgmft 1321 elailyakys pekvmehlkl fwsrinipkv ltacedahly peliflychy eewdnaaltm 1381 ieksevafdh ssfkeiivka pnleihykai qfymnenpsl lvdllkvltp kldlprvvrm 1441 fvqsdnlpmi kpflisvldk nnsvvnsayh dllieeedyk slrssienes nnrfnkldla 1501 erlekhdlif frqiaatlyt kekkfnrais ilktdklwpd llrtvaisks kkiahelldy 1561 fvetgnhecf vallytsyef iandyvmels wlhnlsnfik pyeisiafen qkklnevyqd 1621 lqkrkeadrk qeeepgvgqp lmltngpmsy qgtgatgigl