uncharacterized protein Trf2 isoform X4 [Drosophila takahashii].

LOCUS       XP_070074676            1552 aa            linear   INV 09-DEC-2024
ACCESSION   XP_070074676
VERSION     XP_070074676.1
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_070218575.1
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..1552
                     /product="uncharacterized protein Trf2 isoform X4"
                     /calculated_mol_wt=174545
     Region          <451..638
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          1115..1288
                     /region_name="TLF"
                     /note="TBP-like factors (TLF; also called TLP, TRF, TRP),
                     which are found in most metazoans. TLFs and TBPs have
                     well-conserved core domains; however, they only share
                     about 60% similarity. TLFs, like TBPs, interact with TFIIA
                     and TFIIB, which are part of the...; cd04517"
                     /db_xref="CDD:239953"
     Site            order(1120..1121,1123,1149..1150,1154,1156,1163,1165,1169,
                     1171,1173,1175,1205,1210,1212,1241..1242,1247,1260,1262,
                     1264,1268)
                     /site_type="other"
                     /note="putative DNA interaction surface [nucleotide
                     binding]"
                     /db_xref="CDD:239953"
     Site            order(1135,1142..1144,1146,1150,1156,1158)
                     /site_type="other"
                     /note="putative TFIIA interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:239953"
     Site            order(1222..1223,1235..1239,1242,1247)
                     /site_type="other"
                     /note="putative TFIIB interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:239953"
     CDS             1..1552
                     /gene="Trf2"
                     /coded_by="XM_070218575.1:540..5198"
                     /db_xref="GeneID:108070355"
ORIGIN      
        1 mkenekipsn lleimgivds gqrtststsd vneenrvssf epgrrlvlne vsgefaqerd
       61 tentsspspr keesneesad ssdkenqypn hrpsraddsr spdsvaeten fkdsdveiga
      121 nsvvlsesqi qheqdeslvs dpleeeeeke heeevasgne seekdsprqn sfeegtsgdn
      181 nsdkdspska snsssstpkr pysgsdnrss eertpkrrrq svsdsednrr tlftdsednp
      241 ikqrrltyre qveayrrrvd agstpgrkss sseeepppps ppfryselyw eqrrasdads
      301 epdsafkyrp nanyhrtspr nysdeeeeee ipesdtdqns ggplgyrvet rstnyesset
      361 sedearrrtv rrvvrrrrrp rnpehrepey rgeeqsessp lpssespdrq dnsdenesde
      421 eekrvipsrr rttddqqpsf sgwgyltcrq dadyfseptd gkiirkrksp feeessnqsk
      481 rrpsedtese dsekedsekv dsekedseke dsdkedsdke dsdkedsdke dsdkedseke
      541 dsekedsdke dsdnggsdte kedrntdkrd sdtdndsnte dpqdprdsqd sasdneqvpd
      601 stgepdqdne qfpdsteepd qdneqfpdst eepdqdkelg qtaawtitpd dpkgiqdfqd
      661 fvlkqvqlin eiievghqvf qlgsivchgd ftffqtlyer kvpieevvel vyrgilgvke
      721 elrvaliarq dlsephskdi irpgdklayl rldlfnkfvs kvnqserivd qrllelqevr
      781 kqqglleqkq rvlervrqqr eqhrlqqlqv erereerqee eqrrlelerh lerwkedfnr
      841 qlrlqreqee iklrqeeenr kreeerrsny dsyycqlpkh khreqmqnem vsipvanlng
      901 glkaassgsg gvvgvvtssg vvssavlana prvyltpsst fmanrgqvaa gagatgkiag
      961 gsnvtssvgt ssatagtvry fsqfskmqta ggpslqrkla ngdtivlang nkslflsssg
     1021 gvggdkatng nslltaktel leeevmqpgt vivdcddddd edeneneded dedgedkdek
     1081 nnshtakssg vqqeqplalt tatnnaaasd depeldivin nvvcsfsvgc hlklreialq
     1141 gsnveyrren gmvtmklrhp yttasiwssg ritctgatse amakvaarry artlgklgfp
     1201 trflnfrivn vlgtcsmpwa ikivnfserh renasyepel hpgvtykmrd pdpkatlkif
     1261 stgsvtvtaa svshvesaiq hiyplvfefr kqrsleelqh lrqkqhkqag gdpselekli
     1321 vaenkaagld diflnttaah tkpspnertp atsgiltsti dsmqrlkqie nyshmmkltq
     1381 eerrhipfqg ekvnpaaast saaaaassgd nicanarrra tecwatklqy krpryndpgt
     1441 tgtvnassta asssaassss sqaaphlrtn plktaalana rmrgakmptv lkpgtrlapi
     1501 gggylqhqqh lqqqqqlqqq qqkmrqtsfs psefdvddli eeeesneldm qy