uncharacterized protein Trf2 isoform X3 [Drosophila takahashii].

LOCUS       XP_070074675            1553 aa            linear   INV 09-DEC-2024
ACCESSION   XP_070074675
VERSION     XP_070074675.1
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_070218574.1
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..1553
                     /product="uncharacterized protein Trf2 isoform X3"
                     /calculated_mol_wt=174633
     Region          <452..639
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          1116..1289
                     /region_name="TLF"
                     /note="TBP-like factors (TLF; also called TLP, TRF, TRP),
                     which are found in most metazoans. TLFs and TBPs have
                     well-conserved core domains; however, they only share
                     about 60% similarity. TLFs, like TBPs, interact with TFIIA
                     and TFIIB, which are part of the...; cd04517"
                     /db_xref="CDD:239953"
     Site            order(1121..1122,1124,1150..1151,1155,1157,1164,1166,1170,
                     1172,1174,1176,1206,1211,1213,1242..1243,1248,1261,1263,
                     1265,1269)
                     /site_type="other"
                     /note="putative DNA interaction surface [nucleotide
                     binding]"
                     /db_xref="CDD:239953"
     Site            order(1136,1143..1145,1147,1151,1157,1159)
                     /site_type="other"
                     /note="putative TFIIA interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:239953"
     Site            order(1223..1224,1236..1240,1243,1248)
                     /site_type="other"
                     /note="putative TFIIB interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:239953"
     CDS             1..1553
                     /gene="Trf2"
                     /coded_by="XM_070218574.1:540..5201"
                     /db_xref="GeneID:108070355"
ORIGIN      
        1 mkenekipsn lleimgivsd sgqrtststs dvneenrvss fepgrrlvln evsgefaqer
       61 dtentsspsp rkeesneesa dssdkenqyp nhrpsradds rspdsvaete nfkdsdveig
      121 ansvvlsesq iqheqdeslv sdpleeeeek eheeevasgn eseekdsprq nsfeegtsgd
      181 nnsdkdspsk asnsssstpk rpysgsdnrs seertpkrrr qsvsdsednr rtlftdsedn
      241 pikqrrltyr eqveayrrrv dagstpgrks ssseeepppp sppfrysely weqrrasdad
      301 sepdsafkyr pnanyhrtsp rnysdeeeee eipesdtdqn sggplgyrve trstnyesse
      361 tsedearrrt vrrvvrrrrr prnpehrepe yrgeeqsess plpssespdr qdnsdenesd
      421 eeekrvipsr rrttddqqps fsgwgyltcr qdadyfsept dgkiirkrks pfeeessnqs
      481 krrpsedtes edsekedsek vdsekedsek edsdkedsdk edsdkedsdk edsdkedsek
      541 edsekedsdk edsdnggsdt ekedrntdkr dsdtdndsnt edpqdprdsq dsasdneqvp
      601 dstgepdqdn eqfpdsteep dqdneqfpds teepdqdkel gqtaawtitp ddpkgiqdfq
      661 dfvlkqvqli neiievghqv fqlgsivchg dftffqtlye rkvpieevve lvyrgilgvk
      721 eelrvaliar qdlsephskd iirpgdklay lrldlfnkfv skvnqseriv dqrllelqev
      781 rkqqglleqk qrvlervrqq reqhrlqqlq verereerqe eeqrrleler hlerwkedfn
      841 rqlrlqreqe eiklrqeeen rkreeerrsn ydsyycqlpk hkhreqmqne mvsipvanln
      901 gglkaassgs ggvvgvvtss gvvssavlan aprvyltpss tfmanrgqva agagatgkia
      961 ggsnvtssvg tssatagtvr yfsqfskmqt aggpslqrkl angdtivlan gnkslflsss
     1021 ggvggdkatn gnslltakte lleeevmqpg tvivdcdddd dedenenede ddedgedkde
     1081 knnshtakss gvqqeqplal ttatnnaaas ddepeldivi nnvvcsfsvg chlklreial
     1141 qgsnveyrre ngmvtmklrh pyttasiwss gritctgats eamakvaarr yartlgklgf
     1201 ptrflnfriv nvlgtcsmpw aikivnfser hrenasyepe lhpgvtykmr dpdpkatlki
     1261 fstgsvtvta asvshvesai qhiyplvfef rkqrsleelq hlrqkqhkqa ggdpselekl
     1321 ivaenkaagl ddiflnttaa htkpspnert patsgiltst idsmqrlkqi enyshmmklt
     1381 qeerrhipfq gekvnpaaas tsaaaaassg dnicanarrr atecwatklq ykrpryndpg
     1441 ttgtvnasst aasssaasss ssqaaphlrt nplktaalan armrgakmpt vlkpgtrlap
     1501 igggylqhqq hlqqqqqlqq qqqkmrqtsf spsefdvddl ieeeesneld mqy