homeobox protein cut isoform X2 [Drosophila takahashii].

LOCUS       XP_070074441            2174 aa            linear   INV 09-DEC-2024
ACCESSION   XP_070074441
VERSION     XP_070074441.1
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_070218340.1
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..2174
                     /product="homeobox protein cut isoform X2"
                     /calculated_mol_wt=234183
     Region          879..948
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          1343..1418
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          1616..1691
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          1746..1802
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..2174
                     /gene="ct"
                     /coded_by="XM_070218340.1:1125..7649"
                     /db_xref="GeneID:108060310"
ORIGIN      
        1 mqptlpqaag tadmdltavq sindwffkke qiyllaqfwq qratlaekev ntlkeqlstg
       61 npensdnsdt atvaaatnds eedqqqqqqq qqqqsdsdkl lnssivaaai tlqqqngsnl
      121 lantntpsps ppllsaeqqq qlqsslqqsg ggaclnpklf fnhaqqmmmm eaaaaaaaaa
      181 lqqqqqqqsp lhspatevai paeqpaattg aataaaatpi asgniksssn inhsnntsnn
      241 nshqeqedqe leededeeee dededdeeen asmqsnaddm eldaqqetrt epsattqqqd
      301 ladleeqnkd ageaslnvsn nhttdsnnsc srknnngggn eseqhvansa edddcannnt
      361 ntsnnnntss ttatsntnnn nnnnnsssgn sekrkkknnn nnngqpavll aakdkeikal
      421 ldelqrlral eqthlvqiqr leehlevkrq himrlearld kqqinealae atalaaaaat
      481 nnnnnsqssd nnkqsnkage aatpldasss visigdlpea tktsaavpsa aaaededede
      541 dqamlvdsee aeekpeehqr gdddeeeeee aedreavnat ntttttdsne lkikkeqhpl
      601 dlnvlspnsa lataaaaaaa aacandpnkf qalliertka laaealknga sdaisedahh
      661 hqqqhhqqqq qqhhhqqhhq qqqqhhqqqq qhhhhhhlqn sgsnsnpatn sdlnhhghhl
      721 hhlhhlhhes ssnsstpsvt aasgnggsnn agnqatqata qlaaslastl ngaqksllqe
      781 dsnglataaa maahahlgpv sgflpglpaf qfaaaqvaag ggdgrvghyr fadselqlpp
      841 gasmagrlge slipkgdpme aklqemlryn mdkyanqald tlhisrrvre llsvhnigqr
      901 lfakyilgls qgtvsellsk pkpwdkltek grdsyrkmha wacddnavml lkslipkkds
      961 glpqyagrga ggaggddsms edriahilse asslmkqtsv ahrehrelqq errshgedsh
     1021 snedsksppq sctspffkve qqlkqqqhqq qqhltpeqaa aaqqrerere qrerereqqq
     1081 rlrhedlaqd kmarlyqeli artpretafp sflfspslfg gaagmpgaag nafpamaden
     1141 mrhvfereia klqqhqqqqq qqqqaaaaqf pnfsslmalq qqvlngaqdl slaaaaaask
     1201 diklngqrss lehsagssss cskdgeredg yrksegggtp appappagaa plpsggaptg
     1261 apggatsgns aapsplsnsi lppalssqge efaatasplq rmasitnsli tqppvtphhs
     1321 tpqrptkavl ppitqqqfdm fnnlntediv rrvkealsqy sisqrlfges vlglsqgsvs
     1381 dllarpkpwh mltqkgrepf irmkmflede navhklvasq ykiapeklmr tgsysgspqm
     1441 pqglaskmqa vgslpmqkmm selklqepga aqaqhlmqqm qaaamsaamq qqqqqqvaqq
     1501 hhqqqhlvaq qqqqhlaaqq qqqqhlvaqq qqqqqqhaaa aalhhqsmll tspglppqha
     1561 islppsagnp ssnpnpssnp gekkpmlmpv hgtnamrslh qhmsptvyem aaltqdldth
     1621 dittkikeal lannigqkif geavlglsqg svsellskpk pwhmlsikgr epfirmqlwl
     1681 sdannverlq llknerreas krrrstgpnq qdnssdtssn dtndfytssp gpgsvgsgvg
     1741 gappskkqrv lfseeqkeal rlafaldpyp nvgtieflan elglatrtit nwfhnhrmrl
     1801 kqqvphgpag qdnpipsres tsatpfdpvq frillqqrll elhkermgms gapipyppyf
     1861 aaaailgrsl agipgaaaaa gaaaaaaavg aatgdelqal nqafkeqmsg ldlsmptlkr
     1921 ersddyqeld leleggsghn lsdnesemeg gqeedkttsd yekalhksal aaaaaymsna
     1981 vrssrrkpaa pqwvnpagav tnpsavvaav aaaaaaaaaa dneriingvc vmqgsgssss
     2041 veptdsgatn eeaeehehaq leidqrfmep evhikqeedd deeeqptata ensgeensel
     2101 klkvvneekl rmvrvrrlss ngggsseemp aplapppsag aatssssgav estscsssst
     2161 pavttaaaaa swny