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LOCUS XP_070074259 1824 aa linear INV 09-DEC-2024 ACCESSION XP_070074259 VERSION XP_070074259.1 DBLINK BioProject: PRJNA1194641 DBSOURCE REFSEQ: accession XM_070218158.1 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..1824 /organism="Drosophila takahashii" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" Protein 1..1824 /product="hormone receptor 4 isoform X5" /calculated_mol_wt=194886 Region 1236..1325 /region_name="NR_DBD_DHR4_like" /note="DNA-binding domain of ecdysone-induced DHR4 orphan nuclear receptor is composed of two C4-type zinc fingers; cd07168" /db_xref="CDD:143542" Site order(1244,1247,1261,1264,1280,1286,1296,1299) /site_type="other" /note="zinc binding site [ion binding]" /db_xref="CDD:143542" Site order(1254..1256,1262..1263,1265,1267,1270,1273, 1293..1294,1297,1300,1311,1314) /site_type="other" /note="putative DNA binding site [nucleotide binding]" /db_xref="CDD:143542" Region 1561..1820 /region_name="NR_LBD_DHR4_like" /note="The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4; cd06953" /db_xref="CDD:132751" Site order(1591..1592,1596,1630,1634,1637,1704,1727) /site_type="other" /note="putative ligand binding site [chemical binding]" /db_xref="CDD:132751" Site order(1601,1604,1608,1613,1618..1619,1621..1622, 1625..1626) /site_type="active" /note="putative coactivator recognition site [active]" /db_xref="CDD:132751" CDS 1..1824 /gene="Hr4" /coded_by="XM_070218158.1:225..5699" /db_xref="GeneID:108056780" ORIGIN 1 mnaqqplile qpkassvvvv aaspaaeiea atsteavasa satspesisn tqngsgingn 61 nhgcrrisqe eqdqqdqkdh ndqvkdvvan kltiiktpln ktllkkcnsn gslqlqlqph 121 nngnsnlssn nnnstrnsnn sansdnieig acdsglqsgn sneqepfann nndrhhhiyh 181 hhhhhyhhhh ggggggddkg ettsgdvass ssadlrqvke epslqdndnh vkatageeea 241 dkggaaaega iggatatata aataatpcnp skcnkcnshn nnsncnnnnn tisnnnnntn 301 nnnninnnnh ynnynnyykk ksrmppicri mtlsrgpyse ldkmslfqdl klkrrkidsr 361 cssdgesiad tstsspdlla pmspklcdgg lgpgassvgv ggvslnlplp lpmslplplp 421 lpltsassat aavtvslaav vaavaegsgg gsvagttvvt asvagpcvst sstttaaaas 481 sstpsslsss lsssssssst nsssssstst tagatsstta tcpassssss nksggsikqe 541 lhteihssss aisaaaastv mspppaepar sspetptnes gsggatggsg gsatggsain 601 ehqnngngsg gssraspdsl eekpsttttp tngvmssggg agngggatgs saklseagms 661 virsvkeerl lsvsskmmaf hqqreqeska aghvtvlvtp sriksepppp aspsstsstl 721 rerererere rerererdre rdisssqqhl ssrisasgsp ptqlghgqga mgativqthh 781 lhqqltqplt lrkssppteh llsqsmqhlt qqqalhlhhl lgqqqqqqas hpqqqqqqqq 841 qqqqqqqqqq qhsphslvrv kkepnvgqrh lsphhqqqsp hlqqqqqqqh lhqqqqqhlh 901 qqqhhqqqqq pqalalmhpa slalrnsnrd aailfrvkse vhqqvaaglp hlmqsaggaa 961 aaaaaavaaq rmvcfsnari ngvkpevigg plgnlrpvgg ggngggglsg ggggggssvq 1021 cpsphpssss sssqlspqtp sqtpprgtpt vimgescgvr tmvwgyeppp ptvgqsvggq 1081 qqqqqhpqqq qqqqsphhqp qqqqqqqhcl sspsagsltp sssgggsvgg pltpsssvtp 1141 qnneeaaqll lslgqtriqd mrarphpfrt phalnmerlw agdysqlppg qlqalnlsaq 1201 qqqwgssnsg gglgggvggg lggrggglea pheptdedeq plvcmicedk atglhygiit 1261 cegckgffkr tvqnrrvytc vadgtceitk aqrnrcqycr fkkcieqgmv lqavredrmp 1321 ggrnsgavyn lykvkykkhk ktnqkqqqqa aqqqqqqqqa aaqqqhqqqq hqqqqqhqqh 1381 qqlhsplhhh hhqvghqshh pqqqhhpqls phhllspqqq qlaaavaaaa qhqqqqqqqq 1441 qqqqaklmdm kpmflgpvlk pellqappmh spaqqqqqss phlslssphq qqqqqqnhhq 1501 qqqpggvsga qlpphlvngt ilktaltnps eivhlrhrld savssskdrq isyehavami 1561 qtlidcdame diatlphfse fledkseise klcnigdsiv hklvswtkkl pfyleipvei 1621 htklltdkwh eililttaay qalhgkrrsg dsgssrhssp astpstlvts ppgtpnaspa 1681 aqplhkddpe fvsevnshls tlqtclttlm gqpiameqlk ldvghmvdkm tqitimfrri 1741 klkmeeyvcl kvyillnkev elesiqeryv qvlrsylqns spqnpqarls ellshipeiq 1801 aaaslllesk mfyvpfvlns asir