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LOCUS XP_070074255 1578 aa linear INV 09-DEC-2024 ACCESSION XP_070074255 VERSION XP_070074255.1 DBLINK BioProject: PRJNA1194641 DBSOURCE REFSEQ: accession XM_070218154.1 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..1578 /organism="Drosophila takahashii" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" Protein 1..1578 /product="hormone receptor 4 isoform X1" /calculated_mol_wt=169108 Region 989..1078 /region_name="NR_DBD_DHR4_like" /note="DNA-binding domain of ecdysone-induced DHR4 orphan nuclear receptor is composed of two C4-type zinc fingers; cd07168" /db_xref="CDD:143542" Site order(997,1000,1014,1017,1033,1039,1049,1052) /site_type="other" /note="zinc binding site [ion binding]" /db_xref="CDD:143542" Site order(1007..1009,1015..1016,1018,1020,1023,1026, 1046..1047,1050,1053,1064,1067) /site_type="other" /note="putative DNA binding site [nucleotide binding]" /db_xref="CDD:143542" Region 1314..1574 /region_name="NR_LBD_DHR4_like" /note="The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4; cd06953" /db_xref="CDD:132751" Site order(1344..1345,1349,1383,1387,1390,1457,1480) /site_type="other" /note="putative ligand binding site [chemical binding]" /db_xref="CDD:132751" Site order(1354,1357,1361,1366,1371..1372,1374..1375, 1378..1379) /site_type="active" /note="putative coactivator recognition site [active]" /db_xref="CDD:132751" CDS 1..1578 /gene="Hr4" /coded_by="XM_070218154.1:646..5382" /db_xref="GeneID:108056780" ORIGIN 1 mlpervtiip kiqkhtkska ksnekaktkk pqanthkska rkattataka kttigkqenf 61 lflskfeqsa ktrkneimts igimtlsrgp yseldkmslf qdlklkrrki dsrcssdges 121 iadtstsspd llapmspklc dgglgpgass vgvggvslnl plplpmslpl plplpltsas 181 sataavtvsl aavvaavaeg sgggsvagtt vvtasvagpc vstsstttaa aassstpssl 241 ssslssssss sstnssssss tsttagatss ttatcpasss sssnksggsi kqelhteihs 301 sssaisaaaa stvmspppae parsspetpt nesgsggatg gsggsatggs ainehqnngn 361 gsggssrasp dsleekpstt ttptngvmss gggagnggga tgssaklsea gmsvirsvke 421 erllsvsskm mafhqqreqe skaaghvtvl vtpsriksep pppaspssts stlrererer 481 ererererer drerdisssq qhlssrisas gspptqlghg qgamgativq thhlhqqltq 541 pltlrksspp tehllsqsmq hltqqqalhl hhllgqqqqq qashpqqqqq qqqqqqqqqq 601 qqqqhsphsl vrvkkepnvg qrhlsphhqq qsphlqqqqq qqhlhqqqqq hlhqqqhhqq 661 qqqpqalalm hpaslalrns nrdaailfrv ksevhqqvaa glphlmqsag gaaaaaaaav 721 aaqrmvcfsn aringvkpev iggplgnlrp vggggngggg lsgggggggs svqcpsphps 781 ssssssqlsp qtpsqtpprg tptvimgesc gvrtmvwgye pppptvgqsv ggqqqqqqhp 841 qqqqqqqsph hqpqqqqqqq hclsspsags ltpsssgggs vggpltpsss vtpqnneeaa 901 qlllslgqtr iqdmrarphp frtphalnme rlwagdysql ppgqlqalnl saqqqqwgss 961 nsggglgggv ggglggrggg leapheptde deqplvcmic edkatglhyg iitcegckgf 1021 fkrtvqnrrv ytcvadgtce itkaqrnrcq ycrfkkcieq gmvlqavred rmpggrnsga 1081 vynlykvkyk khkktnqkqq qqaaqqqqqq qqaaaqqqhq qqqhqqqqqh qqhqqlhspl 1141 hhhhhqvghq shhpqqqhhp qlsphhllsp qqqqlaaava aaaqhqqqqq qqqqqqqakl 1201 mdmkpmflgp vlkpellqap pmhspaqqqq qssphlslss phqqqqqqqn hhqqqqpggv 1261 sgaqlpphlv ngtilktalt npseivhlrh rldsavsssk drqisyehav amiqtlidcd 1321 amediatlph fsefledkse iseklcnigd sivhklvswt kklpfyleip veihtklltd 1381 kwheililtt aayqalhgkr rsgdsgssrh sspastpstl vtsppgtpna spaaqplhkd 1441 dpefvsevns hlstlqtclt tlmgqpiame qlkldvghmv dkmtqitimf rriklkmeey 1501 vclkvyilln kaevelesiq eryvqvlrsy lqnsspqnpq arlsellshi peiqaaasll 1561 leskmfyvpf vlnsasir