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LOCUS XP_044252030 1736 aa linear INV 09-DEC-2024 ACCESSION XP_044252030 VERSION XP_044252030.1 DBLINK BioProject: PRJNA1194641 DBSOURCE REFSEQ: accession XM_044396095.2 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..1736 /organism="Drosophila takahashii" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" Protein 1..1736 /product="uncharacterized protein isoform X2" /calculated_mol_wt=195966 Region 151..298 /region_name="DUF1759" /note="Protein of unknown function (DUF1759); pfam03564" /db_xref="CDD:281552" Region 489..639 /region_name="pepsin_retropepsin_like" /note="Cellular and retroviral pepsin-like aspartate proteases; cl11403" /db_xref="CDD:472175" Site order(503,505,507,530..532) /site_type="active" /note="inhibitor binding site [active]" /db_xref="CDD:133137" Site 503..505 /site_type="active" /note="catalytic motif [active]" /db_xref="CDD:133137" Site 503 /site_type="active" /note="Catalytic residue [active]" /db_xref="CDD:133137" Site order(530..533,537..540) /site_type="active" /note="Active site flap [active]" /db_xref="CDD:133137" Region 724..938 /region_name="ps-ssRNAv_RdRp-like" /note="conserved catalytic core domain of RNA-dependent RNA polymerase (RdRp) from the positive-sense single-stranded RNA [(+)ssRNA] viruses and closely related viruses; cl40470" /db_xref="CDD:477363" Site order(786..791,825..826,861,863..864,934..935) /site_type="active" /db_xref="CDD:238822" Site order(786..791,825,863) /site_type="other" /note="NTP binding site [chemical binding]" /db_xref="CDD:238822" Site 826 /site_type="other" /note="nucleic acid binding site [nucleotide binding]" /db_xref="CDD:238822" Region 953..1126 /region_name="Peptidase_A17" /note="Pao retrotransposon peptidase; pfam05380" /db_xref="CDD:461634" Region 1352..1408 /region_name="Integrase_H2C2" /note="Integrase zinc binding domain; pfam17921" /db_xref="CDD:465569" Region 1639..1726 /region_name="DUF5641" /note="Family of unknown function (DUF5641); pfam18701" /db_xref="CDD:465838" CDS 1..1736 /gene="LOC123003484" /coded_by="XM_044396095.2:833..6043" /db_xref="GeneID:123003484" ORIGIN 1 maadkdqeqg qassdaslsn lhilqadife rvkqlyqnfk kdsqsrktki yfqtrinkle 61 nfskefdtnh qtlllngcsp eheyftsqla arfeesylty yceigdafet rfptvpsdat 121 pshsnstmhn ttmlqapgst vqlpklpvps ysgkltewpa fhdvfqqlih dngalssiqk 181 fhflkqalpa drdqdvhqmd lteanylvaw slivtrynnp rllfmhhmnt lyelpsiske 241 ssaelkhmln vanvcinefk rlniaiancd hwivhhlttk lpsqtiqawe hslgstkeip 301 tfftlesfln nrlfsidiie grkvpppprq pqgvngfqrn vikhsgnaqt risschtsgv 361 ttnsvrcahc ndqhilrrcp dflakdsfar klivdrskvc lnclspthsl skcnsskncl 421 qcgqrhhtll hfptqvkasd vaqsagnits lnsqgltass nttqlisasa shstphtmil 481 atalvrlhsn atgqsavvra lidhgsegtl vtetvvqalg lprfpvsaei sgvggnstnr 541 ckyrtectls sttnsgfkmw venafvlrtl tsplprtnlt lptcphltgl eladpnfmht 601 nsidvllgvd tipqfmmsgi rrgsydqpia qctqlgwiif gritpkqtht isiqchhsnl 661 etlvqkffel earkfqkkpd lyeqyskvme eyfelhqite aitseeqhrl adkggsisyt 721 actlphhavl kadssttklr vvydasckts ngkslndilc igpalqndlg gvilnwrflq 781 yvfaadiqkm yrcidvhped thfqriiwqr ennaikdycl ttvtfgtasa pytairimhq 841 iaqderdqfp laehvlrkei yvddlqsghe tikgalqvrd dvigalqsag melrkwaanh 901 psllnsippe hmsnskilei enqesiktlg lywhpkedfy gfklkftide iftkrsilat 961 varlydplgf vapviiiakv ilkevwsiri qqadgtpagl awdatvppvi qhkwkeyctn 1021 llkieslrip rwlqylpsti aslqlhifcd gssmayaaca yvrvqhtnns vythliaaks 1081 rvtptkplti prvelcgavl aaqlgdwlck qidqpthpis tyfwsdativ lywiagdplh 1141 wktfvanrvg rilesssasq wrhvptgdnp adcatrglyp dqlaaydlww qgpswlrlpe 1201 sqwpskifdi pdstnlsceq kslslqthsc vernpnsllt sfssynkllf imayvrrfih 1261 nsqtrvdsrq rgpvtaqefq qalghivrlv qhetfkveiq kiktkthlsr snklsqlspf 1321 ldnegvlrvr grlknalhls phqrtpiilp kdhhftelvi rnahlntlhg gisltlavtr 1381 qtfwilngkq avkkilhkcv dcfkhrpkav tqlmgdlplh rvnppkrafe atgvdytgal 1441 eikaskfrgh hkykayiavf iclatkavhl eavtglssqd flwalqrfig rrgycqhiys 1501 dcgtnfigad kslnlwheef rqsviatvip kltaqqiqwh fnpphspnfg glweanvkav 1561 kthlhrtckg almtyeqlst ilvqieacln srplcplssd medlavltpa hfligdsmma 1621 lpnpsasdks lnaqflegqr llrtfwhrws sdwlshlqsr pkwqrveenl rlhdiviikd 1681 drlppnewkl grivelhpgs dnlirvasik tasgiykrsl skicplplat yseate