Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XP_044252029 1797 aa linear INV 09-DEC-2024 ACCESSION XP_044252029 VERSION XP_044252029.1 DBLINK BioProject: PRJNA1194641 DBSOURCE REFSEQ: accession XM_044396094.2 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..1797 /organism="Drosophila takahashii" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" Protein 1..1797 /product="uncharacterized protein isoform X1" /calculated_mol_wt=203303 Region 151..298 /region_name="DUF1759" /note="Protein of unknown function (DUF1759); pfam03564" /db_xref="CDD:281552" Region 489..639 /region_name="pepsin_retropepsin_like" /note="Cellular and retroviral pepsin-like aspartate proteases; cl11403" /db_xref="CDD:472175" Site order(503,505,507,530..532) /site_type="active" /note="inhibitor binding site [active]" /db_xref="CDD:133137" Site 503..505 /site_type="active" /note="catalytic motif [active]" /db_xref="CDD:133137" Site 503 /site_type="active" /note="Catalytic residue [active]" /db_xref="CDD:133137" Site order(530..533,537..540) /site_type="active" /note="Active site flap [active]" /db_xref="CDD:133137" Region 785..999 /region_name="ps-ssRNAv_RdRp-like" /note="conserved catalytic core domain of RNA-dependent RNA polymerase (RdRp) from the positive-sense single-stranded RNA [(+)ssRNA] viruses and closely related viruses; cl40470" /db_xref="CDD:477363" Site order(847..852,886..887,922,924..925,995..996) /site_type="active" /db_xref="CDD:238822" Site order(847..852,886,924) /site_type="other" /note="NTP binding site [chemical binding]" /db_xref="CDD:238822" Site 887 /site_type="other" /note="nucleic acid binding site [nucleotide binding]" /db_xref="CDD:238822" Region 1014..1187 /region_name="Peptidase_A17" /note="Pao retrotransposon peptidase; pfam05380" /db_xref="CDD:461634" Region 1413..1469 /region_name="Integrase_H2C2" /note="Integrase zinc binding domain; pfam17921" /db_xref="CDD:465569" Region 1700..1787 /region_name="DUF5641" /note="Family of unknown function (DUF5641); pfam18701" /db_xref="CDD:465838" CDS 1..1797 /gene="LOC123003484" /coded_by="XM_044396094.2:777..6170" /db_xref="GeneID:123003484" ORIGIN 1 maadkdqeqg qassdaslsn lhilqadife rvkqlyqnfk kdsqsrktki yfqtrinkle 61 nfskefdtnh qtlllngcsp eheyftsqla arfeesylty yceigdafet rfptvpsdat 121 pshsnstmhn ttmlqapgst vqlpklpvps ysgkltewpa fhdvfqqlih dngalssiqk 181 fhflkqalpa drdqdvhqmd lteanylvaw slivtrynnp rllfmhhmnt lyelpsiske 241 ssaelkhmln vanvcinefk rlniaiancd hwivhhlttk lpsqtiqawe hslgstkeip 301 tfftlesfln nrlfsidiie grkvpppprq pqgvngfqrn vikhsgnaqt risschtsgv 361 ttnsvrcahc ndqhilrrcp dflakdsfar klivdrskvc lnclspthsl skcnsskncl 421 qcgqrhhtll hfptqvkasd vaqsagnits lnsqgltass nttqlisasa shstphtmil 481 atalvrlhsn atgqsavvra lidhgsegtl vtetvvqalg lprfpvsaei sgvggnstnr 541 ckyrtectls sttnsgfkmw venafvlrtl tsplprtnlt lptcphltgl eladpnfmht 601 nsidvllgvd tipqfmmsgi rrgsydqpia qctqlgwiif gritpkqtht isiqchhsnl 661 etlvqkffel eavsttrlyt aeeqwcedhf krthirqpng kymvrlpfkt lfdpnqtigk 721 skqtalnrfh flqrkfqkkp dlyeqyskvm eeyfelhqit eaitseeqhr ladkggsisy 781 tactlphhav lkadssttkl rvvydasckt sngkslndil cigpalqndl ggvilnwrfl 841 qyvfaadiqk myrcidvhpe dthfqriiwq rennaikdyc lttvtfgtas apytairimh 901 qiaqderdqf plaehvlrke iyvddlqsgh etikgalqvr ddvigalqsa gmelrkwaan 961 hpsllnsipp ehmsnskile ienqesiktl glywhpkedf ygfklkftid eiftkrsila 1021 tvarlydplg fvapviiiak vilkevwsir iqqadgtpag lawdatvppv iqhkwkeyct 1081 nllkieslri prwlqylpst iaslqlhifc dgssmayaac ayvrvqhtnn svythliaak 1141 srvtptkplt iprvelcgav laaqlgdwlc kqidqpthpi styfwsdati vlywiagdpl 1201 hwktfvanrv grilesssas qwrhvptgdn padcatrgly pdqlaaydlw wqgpswlrlp 1261 esqwpskifd ipdstnlsce qkslslqths cvernpnsll tsfssynkll fimayvrrfi 1321 hnsqtrvdsr qrgpvtaqef qqalghivrl vqhetfkvei qkiktkthls rsnklsqlsp 1381 fldnegvlrv rgrlknalhl sphqrtpiil pkdhhftelv irnahlntlh ggisltlavt 1441 rqtfwilngk qavkkilhkc vdcfkhrpka vtqlmgdlpl hrvnppkraf eatgvdytga 1501 leikaskfrg hhkykayiav ficlatkavh leavtglssq dflwalqrfi grrgycqhiy 1561 sdcgtnfiga dkslnlwhee frqsviatvi pkltaqqiqw hfnpphspnf gglweanvka 1621 vkthlhrtck galmtyeqls tilvqieacl nsrplcplss dmedlavltp ahfligdsmm 1681 alpnpsasdk slnaqflegq rllrtfwhrw ssdwlshlqs rpkwqrveen lrlhdiviik 1741 ddrlppnewk lgrivelhpg sdnlirvasi ktasgiykrs lskicplpla tyseate