LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein


LOCUS       XP_041447905             667 aa            linear   INV 14-MAY-2021
            1-like [Drosophila obscura].
ACCESSION   XP_041447905
VERSION     XP_041447905.1
DBLINK      BioProject: PRJNA728747
DBSOURCE    REFSEQ: accession XM_041591971.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Drosophila obscura
  ORGANISM  Drosophila obscura
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024542752.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Drosophila obscura Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 1% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Drosophila obscura"
                     /isolate="BZ-5 IFL"
                     /db_xref="taxon:7282"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="whole fly"
                     /dev_stage="Adult fly"
                     /geo_loc_name="Serbia: Babin Zub"
                     /collection_date="2017"
     Protein         1..667
                     /product="LOW QUALITY PROTEIN: serine/arginine repetitive
                     matrix protein 1-like"
                     /calculated_mol_wt=73648
     Region          265..>519
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <573..618
                     /region_name="LIM"
                     /note="Zinc-binding domain present in Lin-11, Isl-1,
                     Mec-3; smart00132"
                     /db_xref="CDD:214528"
     CDS             1..667
                     /gene="LOC121403886"
                     /coded_by="XM_041591971.1:221..2224"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121403886"
ORIGIN      
        1 mmaertinwa mdaemgmikl ktmtavcfvc nlpimshqvg lvwsggngwd dlvreqlees
       61 tirqrlggrr dsaaqittpp stspppglqr rrrsslaqlt dilrewsggt kqqtqqqqqq
      121 qaqqqarnkg qlnrretlad larslpwrts ttdastgagg agagtgssts ggnityiapr
      181 krressadsg irsirsrres ntaefvkhwn rrestaveeq apshisvnvv vvetttksas
      241 rrgsgesyls ssrrdsnvag rvttpppppk yqvtkkrdsl aapefpnfrq eqrpstssag
      301 schsdsvsvp liqyhqqvds acqalpppti itssvtppat sptapkgrrd sttqcgrvnr
      361 rdskaghspe raprmnrlqr qatafdesvl pggsrrgsqp alspdppedc errasrrdsl
      421 spdsasrggr rdsrthlspd rtherdgspr rhtlrrqsss aarhspesns cgssrdpspc
      481 srppplpave qnqrpairrq stteeiliar gfrrqsttee mircrnfrrq ssqsddvcry
      541 rgrrdssaqi idgtigtmtv ettstffdss tqtepsplyd nnhyheeclr cnscglnltg
      601 pnqrrarrfk nqilcdlhfa dvalmecsdf mqqlrsfkpq slgcavarrk ssttlifplp
      661 pqacsgm