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LOCUS XM_041591971 2224 bp mRNA linear INV 14-MAY-2021 protein 1-like (LOC121403886), mRNA. ACCESSION XM_041591971 VERSION XM_041591971.1 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq; corrected model; includes ab initio. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases frameshifts :: corrected 1 indel ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-184 JAECWW010000165.1 81495-81678 c 185-282 JAECWW010000165.1 63083-63180 c 283-388 JAECWW010000165.1 35737-35842 c 389-934 JAECWW010000165.1 35121-35666 c 935-1648 JAECWW010000165.1 33919-34632 c 1649-1836 JAECWW010000165.1 33730-33917 c 1837-1940 JAECWW010000165.1 33561-33664 c 1941-2050 JAECWW010000165.1 19282-19391 c 2051-2224 JAECWW010000165.1 18785-18958 c FEATURES Location/Qualifiers source 1..2224 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..2224 /gene="LOC121403886" /note="The sequence of the model RefSeq transcript was modified relative to its source genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns" /db_xref="GeneID:121403886" CDS 221..2224 /gene="LOC121403886" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon" /codon_start=1 /product="LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like" /protein_id="XP_041447905.1" /db_xref="GeneID:121403886" /translation="MMAERTINWAMDAEMGMIKLKTMTAVCFVCNLPIMSHQVGLVWS GGNGWDDLVREQLEESTIRQRLGGRRDSAAQITTPPSTSPPPGLQRRRRSSLAQLTDI LREWSGGTKQQTQQQQQQQAQQQARNKGQLNRRETLADLARSLPWRTSTTDASTGAGG AGAGTGSSTSGGNITYIAPRKRRESSADSGIRSIRSRRESNTAEFVKHWNRRESTAVE EQAPSHISVNVVVVETTTKSASRRGSGESYLSSSRRDSNVAGRVTTPPPPPKYQVTKK RDSLAAPEFPNFRQEQRPSTSSAGSCHSDSVSVPLIQYHQQVDSACQALPPPTIITSS VTPPATSPTAPKGRRDSTTQCGRVNRRDSKAGHSPERAPRMNRLQRQATAFDESVLPG GSRRGSQPALSPDPPEDCERRASRRDSLSPDSASRGGRRDSRTHLSPDRTHERDGSPR RHTLRRQSSSAARHSPESNSCGSSRDPSPCSRPPPLPAVEQNQRPAIRRQSTTEEILI ARGFRRQSTTEEMIRCRNFRRQSSQSDDVCRYRGRRDSSAQIIDGTIGTMTVETTSTF FDSSTQTEPSPLYDNNHYHEECLRCNSCGLNLTGPNQRRARRFKNQILCDLHFADVAL MECSDFMQQLRSFKPQSLGCAVARRKSSTTLIFPLPPQACSGM" misc_feature 1013..>1777 /gene="LOC121403886" /note="transcriptional regulator ICP4; Provisional; Region: PHA03307" /db_xref="CDD:223039" misc_feature <1937..2074 /gene="LOC121403886" /note="Zinc-binding domain present in Lin-11, Isl-1, Mec-3; Region: LIM; smart00132" /db_xref="CDD:214528" ORIGIN 1 ttgaatcctc ttcaaatata catacaaaca aaaaaatata tcagacacta agaaaatcta 61 agaatatata agacatatca actaaagata tcgagccgat attccactga agaaatcggc 121 atgcaaagta ctaacataaa acgaaactaa cgagagagtc cacgattcca aggaagcaaa 181 aaattttttt gttgtctaac atccaaggtc cgatgctcac atgatggccg aaagaacgat 241 caattgggcc atggatgccg agatgggcat gattaagctc aagacaatga cagcggtatg 301 ctttgtgtgc aacctgccca tcatgtcaca tcaggtgggt ctggtgtggt caggtggcaa 361 cggctgggac gacctcgtcc gcgaacagct ggaagagtca acgatccgtc agcgattagg 421 cggacgtcgc gattccgccg cccagatcac aaccccaccg agcacgtcgc caccgccagg 481 acttcaacgg cggcggcgca gctccttggc ccaacttact gacattctgc gcgagtggag 541 cggcggcacc aagcaacaga cccaacagca gcagcagcaa caggcccagc agcaggcccg 601 caacaagggt cagctgaatc ggcgcgaaac gcttgccgat ctcgcccgca gcctgccctg 661 gcggacatcg acgacagatg cgagcactgg tgctggtggt gctggggctg ggactggttc 721 cagtaccagt gggggcaata tcacgtacat tgccccacgc aagcgtcgcg agtcgagcgc 781 cgattccggc atacgcagca tcagatctcg ccgcgaatcg aacacggccg agttcgtgaa 841 gcactggaac aggcgcgaga gcaccgccgt cgaggagcaa gcaccaagcc acatttccgt 901 gaatgtggtg gtcgtcgaaa ctaccactaa gagcgcctcg cgccgcggat ccggggagag 961 ctacctgtcg agcagccggc gggacagcaa tgtcgccggc cgcgtgacaa cgccgccacc 1021 gccacccaag taccaggtga ccaagaagcg ggactcgctc gccgccccgg agttccccaa 1081 cttccggcag gagcagcgcc cctccaccag ctccgccggc tcctgtcact ccgactccgt 1141 ctccgtgcca ctaatccagt accatcagca ggtggactcc gcatgccagg ccctgccgcc 1201 gcccaccatc atcaccagct cggtgacgcc gccggccacc agtccaacgg caccgaaggg 1261 tcggcgcgac tccaccacac agtgcggccg cgtcaatcgg cgcgactcga aggcgggcca 1321 cagtccggag cgcgcaccgc gcatgaaccg cctgcagcgg caggcgacgg ccttcgacga 1381 gagcgttctg cctggcggca gtcgacgcgg ctcccagcca gccctcagcc cggatccgcc 1441 cgaggattgt gagcgccgtg cctcgcgccg cgactccctt tcgccggaca gcgcctcgcg 1501 cggcggacga cgcgactcgc gcacccatct ctcgcccgac cgcacacacg agcgcgacgg 1561 cagtccacgg cgacacacgc tgcgccgcca gagcagctcg gcggcccgcc actcgcccga 1621 atcgaacagc tgcggctcgt cgcgggatcc cagtccgtgc tcccggccac caccgttgcc 1681 ggctgtggaa cagaaccaga gacccgccat caggcgccag tccaccaccg aggagatcct 1741 cattgcgcgc ggctttcggc gccagtccac cacggaggag atgatacgct gccgcaactt 1801 ccggcgccag agctcccaga gcgatgacgt ctgtcgctac cgcggacgtc gcgattcatc 1861 ggctcagatc attgacggta ccatcggcac catgaccgtg gagaccacca gcactttctt 1921 cgactccagc actcagacag aaccatcgcc gctgtacgac aacaaccact accatgagga 1981 gtgtctgcgg tgcaactcgt gcggcttgaa tttgacagga cccaaccaga ggcgcgccag 2041 gaggttcaag aaccagatcc tgtgcgacct gcatttcgca gacgtggccc taatggagtg 2101 ctccgatttt atgcagcagc tgcggagctt caagccccaa tcgctgggct gtgcggtggc 2161 gcgacgcaag agctccacga cgttaatatt tccattgccg ccgcaagcat gttcaggtat 2221 gtag