LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase highwire
LOCUS XP_041447872 5491 aa linear INV 14-MAY-2021
[Drosophila obscura].
ACCESSION XP_041447872
VERSION XP_041447872.1
DBLINK BioProject: PRJNA728747
DBSOURCE REFSEQ: accession XM_041591938.1
KEYWORDS RefSeq; corrected model.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
frameshifts :: corrected 2 indels
##RefSeq-Attributes-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..5491
/organism="Drosophila obscura"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
Protein 1..5491
/product="LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
highwire"
/calculated_mol_wt=590549
Region <589..784
/region_name="ATS1"
/note="Alpha-tubulin suppressor ATS1 and related RCC1
domain-containing proteins [Cell cycle control, cell
division, chromosome partitioning, Cytoskeleton]; COG5184"
/db_xref="CDD:444065"
Region <960..1049
/region_name="ATS1"
/note="Alpha-tubulin suppressor ATS1 and related RCC1
domain-containing proteins [Cell cycle control, cell
division, chromosome partitioning, Cytoskeleton]; COG5184"
/db_xref="CDD:444065"
Region 1453..1603
/region_name="PHR"
/note="PHR domain; pfam08005"
/db_xref="CDD:462339"
Region 2039..2192
/region_name="PHR"
/note="PHR domain; pfam08005"
/db_xref="CDD:462339"
Region 3107..>3149
/region_name="SH3_3"
/note="Bacterial SH3 domain; pfam08239"
/db_xref="CDD:462405"
Region 4433..4547
/region_name="APC10-like"
/note="APC10-like DOC1 domains in E3 ubiquitin ligases
that mediate substrate ubiquitination; cl02148"
/db_xref="CDD:382862"
Site order(4443,4470,4477,4539)
/site_type="other"
/note="putative ligand binding site [chemical binding]"
/db_xref="CDD:176484"
Region 5067..5115
/region_name="Bbox2_MYCBP2"
/note="B-box-type 2 zinc finger found in Myc-binding
protein 2 (MYCBP2) and similar proteins; cd19799"
/db_xref="CDD:380857"
Region 5246..5300
/region_name="RING-H2_PHR"
/note="RING finger, H2 subclass, found in the PHR
(Pam/Highwire/RPM-1) protein family; cd16463"
/db_xref="CDD:438126"
CDS 1..5491
/gene="LOC111076890"
/coded_by="XM_041591938.1:27..16502"
/note="The sequence of the model RefSeq protein was
modified relative to its source genomic sequence to
represent the inferred CDS: inserted 1 base in 1 codon;
deleted 1 base in 1 codon"
/db_xref="GeneID:111076890"
ORIGIN
1 mpanmvglln pmkygdhfye lftnqtrrrt hnerrtltkr ksrkeksaaa maaaaaaavl
61 dgnpggivnp ldpplvkeql mimpsfpagh ielepnaskf avfsairttv leaetryall
121 qeggggreag mglkkwaanl dssccllcaa sclasnildc tchaqlalaa galgggpgpg
181 iapggaaiag ligvvigpgg pggsndkrnr rdsansdads dteepterep vyatvplivg
241 aglrslfeli adarhiqpll ctkalkalld viqgqqpesf kmepeelinp lydllldlat
301 mpaalnsttg aeanwsamac aallglciar gdtgkmlkai aamlmsprql saqivqlpav
361 laalqhtvis aalnkptrpd fhshgvphns lidefplklp evgpggaeta pamacdgvfl
421 yllydgyllk igtgfggsyk ghvyaqnddf trernawlgy saghlyfrrn crrntgdqlq
481 lvgldtlalk smsplnmlam reginyvlft dddslhaics nrddtlvvkk lnlyhnsyss
541 epqpfelplq larkkfrtlg yaafeddlln qhqvqriqss hnsfepklpa tcrdadvdvl
601 gmacgkefgl vrasngrvyy ygkstalglk cvgrtpslkl teliiskaah ivhvavghdg
661 ihallvnddg tvffagtarr gedgdtsknr rqpkavkpkk mtkidghvvv haacnngtsa
721 fvtkagklim ygkdtahcda mgfvtelldq hvtkvalgka hcvalnakgq lfsfglnnkg
781 qcgrifnklq pvkdvassss aascfaallp pdkrykldls alcdyddhsl vqgqcrvciv
841 crectgynvs cvsalnvple qrlagsicpc ghgdagcakc glcatcialq dndndanrel
901 ktlstemqqr qqrsktllmr rkekkpcele tgaagggaat ptdldkdppr vaplapqllq
961 lpsaspvvqv acglhhtvvl tlagevytfg snqygqlgsg dlqpvsgpvr vqvqgaisqv
1021 aagsnhsvll thkgmvytfg nyqkgqlgrl psdfgpnidk nqrpgqspgq gqaqpqpqph
1081 tqdeelpnst tggasgssda aaaaalessv lpscskelpp lmpnfscpvl tqrqkflwnc
1141 spaavfglgp sfgkkvtwig angdqtfiki deslitaqml pkmhvvanrk tillvpsipl
1201 sfhtlsinrr dgsctahyrg qsnfiqlmqa qpqpqanesq rqtdattpvm aspalaepva
1261 ghassallta lagtatagvp ineqmsrsmh earnqifeep eggvavvasg sggciprprr
1321 flrqrldmga pgspsdqqqs pqqlafamdp synvlwvfdg vsrrirchnv vasdisesde
1381 naanyralls pelslptkae arvsrsqgsl nllacldilt saqdnipycf eqtlpkaihp
1441 ttetpggdyq vvnrfdnfgg gwgysghsve airfasdtdi vlcgfgmfgg rgeysckvkl
1501 fdlgsdgggy ekegvllset kevpyecaar skhhillpkp vsaaagrwyl vwariagpss
1561 dcgscgqasv ttedqvvfsf ksskkanngt dvnsgqipai lyrlvtqdck qtaapmdadp
1621 vqrisrafan svsrecfesl vvllswswes fktqlreqsd rsrplqlqqs lqylgyvnks
1681 clrllrkytn eiypqratnt atgaaagagr nnkggssgpa aggggssmva aalsklesks
1741 skdkhlprvv pnpitvskyf gehpstsgag ggagggsrgg gadgsaagtg tpitrkanle
1801 niqlaecvgn vralligifc ddifkdiatd egyaltleil dechlsfvac fdafyptssl
1861 kwsclcdlla qmdrgalhsr llsailaglc sptvklratf sllsapgndr qsiispsdns
1921 glpmlsstda hqypilveqm iyrtqqeksd flisswtfkd vlvrlldiia spirqriesi
1981 ysrslegsyp gkewinqgli dncchllarv laeivyqtam geydklflpp rtlhstgarf
2041 arcdlsrtwn tgnfgpdaia fsvdrsgiai agamvytgsg sydyqlellf dntvdlqpqh
2101 kwetlesvsg sydqeavhnd laeikfehpv qikeharyal rlcsqgartc sgdsglptvr
2161 gpcgtnfhfy acdlsfngtt pargqlpcil yystpvklea gvvgsgstam aaadavsmla
2221 assqliahev strdtalqia sditkkctel limarnamaa scspsdnsss nhtqtidseh
2281 nitpieehmd inwannsrta aqpraadpqn stardlgrri esfskgimqt ltfdkrstnp
2341 femeiemgat eigeedsddl angqipsqsq gqgqgqgqmq svvpingner vdfelaeqpq
2401 qqqqlqsllv hsdseeaapi dagaagcsgf avgggvglgv gvssvlgeaa rgvplggala
2461 gggcpvaalq llevfnlaas nmfhtllplv yahmsnlacs dpkssvqilg likeilphia
2521 alnqlhvske qrqpeaaaaa aaanfphppe aappeqaeaa gagappaags ysssnsggss
2581 sttsnhycmv esehpyrsas iscyrvefpp cvqwmtiefd gqsgtaqled ylllsipmrp
2641 aeqagepasq tddyydmldn nlpsvpesrr tviptasemg tatgagsknr sanaqllmas
2701 ccrtpgtssg sgattasspl raqdandrew ivvkkfntas nwlmsvlvvp gncvefslet
2761 sslyaqdphn nrygfkclvv gydnptaing snsclirleq elsylggmcc anlmkkelnm
2821 pedkdvedms gveetimahh sllskgfals dphlnvhqal epylpigsqs nerqflkdfi
2881 sgapgssgar laawlqpesr ldpnkcemnp iteplrygwp tqvtitirdq ygdavlvpel
2941 kveikaiptg pgphgpggvg aanilrmrra scastvtdac lggmappprf nyevttkerm
3001 cfkaitfmkp ftnysfeelr ysspvqtrst dtlsardmed gtfsvqwtpn svggyclavi
3061 idgihleevy rvevkegvlp pptqrssttr rpqapsklrr fqvrhsaglr irshptlqse
3121 qvgvvrlggi isfideiend dgiwlrlste sirqhctmgw ypteawclqf nqhlakvllq
3181 pvldakdaga vapaspttgg gcsgepspep epehspppsp vlpkspvvqr rflggpvntn
3241 pflfptkrer qrerererer emerererer ereqrervqq mepepdqdve veaelqpela
3301 gaaaaasasa savapppvpv pesgpepela gaaassssss savaatellp anlgsaiagv
3361 vgggairlqa lqkwfkgdai egaqpqaqaq ahepshmdas fsqsppppha gvsvremvra
3421 mgqepapsps gspcpsmrgn gnrsssqqqe qqqeqqqeqe pepefnlasm rrpnytasqt
3481 aallstpkht prrtvagvaa aaaaaavqev vsgleddlsl lqitttttgt eqqselqlas
3541 tsaaatasas aaaarntmgp ikramppsfa esiravfaal lwhegvvhda macasflkfh
3601 pglpkegatv vtrrgetgda rlqlsreqka qqrhsvevan aghylnirps tletltksgn
3661 sslhnrskhr knmsppagge dqqqqpprdg qqqqklqalp evvsvlppal rclvylweqi
3721 csgcvqivqt ngleqprqpr llspihhmdg hghghghepk eggkmgaghh mdqggagasd
3781 kegkktkrkk kddgswceic elflpmpvty hmriahpgcg ksakgkgyns vgifcegwag
3841 ncgeggkgas swflmcdtcr drylascrst nninsvargq eansaednvl nlfgvrstli
3901 anaevyttmr enatfllelc ssfssasssn sssnsilakr spqsmampvv iehqhhhhpl
3961 gvadlkpsts rnsrmarlsg gpkfcpagig gafrksfvgg pptapdnlwl apdsfaclec
4021 lgtagheepp yemfglgpne nafdrplsei syescdpnny dmgmapgtsa aaagavskfh
4081 rsysmgqgwa slvqqatqap qqqhxqqqqq apqqqdtppk vvyrrrnnls sesegarlic
4141 ypsehlrrlv phkllasvtv lqtstsaaaa aaaegdapai spgpeqggag gasssllsrp
4201 amafitqkhe lerlraamrr slrisvcrsy slqalnwllr svtqgvclhd lmwwfvssle
4261 tavthlpdgr yeespdmale hpaaytqisg rfahlitqsl hvllqsvadl tlhlppgspl
4321 qrvaiqcfgi rfrqadhqfl hsshvfgnis kilsksdeqn damavstlll lkseshcdve
4381 hnqlqlnats ggsgagsgsg tgagagpggr vvcytdlagm fdiavssrpa maesltdnst
4441 etfwesdeed rnkvkiievs lirltyacrf llvhidnsrd iqnkvlnvgf yagqslgdtn
4501 liksvdvdsk actwisakin desythfrle lhgpentlrv rqikllglpi qnqqgqpgpa
4561 qfqtlgesmr lgmgmgmglg lglgldepfg selkpylrhs yaphiqqqic eaetlrvfrl
4621 itgqvfgkli snvnavrsse epppevpgpa gvsgggagga ggsslladsl dlrehmvgil
4681 fsrsklshlq kqvivhivha irrealrake dwelanlahd lrnpmeaaaa alpgpplqqq
4741 qqqqaaagss esssersrap dtycfemlsm vlalsgsavg rsylsqqhgl lrdllgllht
4801 gsdrvqrqvt allrrilpei spesfadllg vqrlppadys iahqsgsdfd msrlglldif
4861 laviakslql qikvkttaat agggaaggss gsggsgqaqq kqgqqektpa fvrlcssldl
4921 svqqlrsrpp tgeaqlpgts agagagsvgd pfqfelaapp rkeskrnlnq rwflngiist
4981 kqaesiigli rdlasgklse kwsqttkaai aesvlnltrl eeiyrtpehc tktatlwlal
5041 aslcvlerdh veklssgqws kvcdtrpmct nhddgetaai iqcetcgslc gdcdrflhln
5101 rktrahkrtv ckeeeeairv elhescgrtk lfwllalads ktlkamvefr dgshtiisgp
5161 qeavgrcrfc gltgnsglle ignvcadaqc qeyaansclk tkpcghacgg vvgeekclpc
5221 lqhvcharen elaeeqhdpk ltqdaddmcm icfveavsca psihlecghv fhfhcckavl
5281 ekrwsgprit fgfslcpick adihhpllad ilkpinalkq dvkrkalmri kyegvvkdte
5341 skdvnvtqla mdryayyvcf kcqkayygge arcdaeigek fdpeelvcgg csdvaraqmc
5401 pkhgtdfley kcryccsvav ffcfgtthfc dtchddfqrl tnipkiklpq cpagpkakql
5461 lgdecplhvm hpptgeefal gcgvcrnaqt f