LOW QUALITY PROTEIN: membrane-associated guanylate kinase, WW and
LOCUS XP_022227419 792 aa linear INV 14-MAY-2021
PDZ domain-containing protein 1 [Drosophila obscura].
ACCESSION XP_022227419
VERSION XP_022227419.2
DBLINK BioProject: PRJNA728747
DBSOURCE REFSEQ: accession XM_022371727.2
KEYWORDS RefSeq; corrected model.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XP_022227419.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
frameshifts :: corrected 2 indels
##RefSeq-Attributes-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..792
/organism="Drosophila obscura"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
Protein 1..792
/product="LOW QUALITY PROTEIN: membrane-associated
guanylate kinase, WW and PDZ domain-containing protein 1"
/calculated_mol_wt=83040
Region 56..151
/region_name="PDZ1_harmonin"
/note="PDZ domain 1 of harmonin isoforms a, b, and c, and
related domains; cd06737"
/db_xref="CDD:467219"
Site order(80..86,98,101,130,134,137..138)
/site_type="other"
/note="peptide binding site [polypeptide binding]"
/db_xref="CDD:467219"
Region 191..272
/region_name="PDZ_canonical"
/note="canonical PDZ domain; cl49608"
/db_xref="CDD:483948"
Site order(204..210,222,225,254,258,261..262)
/site_type="other"
/note="peptide binding site [polypeptide binding]"
/db_xref="CDD:467153"
CDS 1..792
/gene="LOC111077450"
/coded_by="XM_022371727.2:560..2938"
/note="The sequence of the model RefSeq protein was
modified relative to its source genomic sequence to
represent the inferred CDS: deleted 2 bases in 2 codons"
/db_xref="GeneID:111077450"
ORIGIN
1 mmtmtatsas istsasastd csssmqgstt ssassdvmtl tttaasswca iptssrlrvl
61 rlvrphqrrl lvggperast ygfavrggre hgtgffvshv ehggeaqlkg lrigdqilri
121 ngfrlddavh kefiqlvgsq drvtlkvrgv gmlpvrdqpe erlswsvvkl psvsgtpses
181 sfkadrrsas rdisvvlhva prtklglgic kgpewkpgif vqftkersva reaglrpgdq
241 ilsvnsidfs dvlfseavav mkssskldmv vrtaagcdlf pgessgynss assvtgdqsp
301 cwadakskrl tavreeavpg gaasgspaaw sqaqvqgkql nktiiklsen gtsinntfia
361 shsssscssa tdkpqsrtrt aphssvmrrs shqrtpaegs aasagggcap ippppktamn
421 easgsgaseg aaaaggssls saiteelkkr kekqqqqqqr nnrelnqiah ngsssssssh
481 shshshrnss sssshavaqv shrhrgnagg ggggavaapp tggtanggdq htalmdefkr
541 ahqrmfrngf hesehkerge tlkrtsimpd dscyrnstas tstsnsnsns kvnsrtavat
601 qknssqhgvt ngaaasngtp elpppppqfa npqprpqmlk landngnsng nivgngmask
661 ikqpmspmrs asisvggfrp patpqpdyda vqlrgnhgti asspaatypt taaaaaaasl
721 qqqqqqrrtl rlgtvtigey geqrtkretl rkvnvgdttv atlssngilk ngssrssasf
781 sqhgektikf gn