LOW QUALITY PROTEIN: nuclear pore complex protein Nup153
LOCUS XP_022220071 1889 aa linear INV 14-MAY-2021
[Drosophila obscura].
ACCESSION XP_022220071
VERSION XP_022220071.2
DBLINK BioProject: PRJNA728747
DBSOURCE REFSEQ: accession XM_022364379.2
KEYWORDS RefSeq; corrected model; includes ab initio.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XP_022220071.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 1% of CDS bases
frameshifts :: corrected 2 indels
##RefSeq-Attributes-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..1889
/organism="Drosophila obscura"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
Protein 1..1889
/product="LOW QUALITY PROTEIN: nuclear pore complex
protein Nup153"
/calculated_mol_wt=194491
Region 971..997
/region_name="zf-RanBP"
/note="Zn-finger in Ran binding protein and others;
pfam00641"
/db_xref="CDD:395516"
Region 972..991
/region_name="RanBP2-type Zn finger"
/note="RanBP2-type Zn finger [structural motif]"
/db_xref="CDD:275376"
Region 1030..1055
/region_name="zf-RanBP"
/note="Zn-finger in Ran binding protein and others;
pfam00641"
/db_xref="CDD:395516"
Region 1030..1049
/region_name="RanBP2-type Zn finger"
/note="RanBP2-type Zn finger [structural motif]"
/db_xref="CDD:275376"
Region 1068..1086
/region_name="RanBP2-type Zn finger"
/note="RanBP2-type Zn finger [structural motif]"
/db_xref="CDD:275375"
Region 1106..1135
/region_name="zf-RanBP"
/note="Zn-finger in Ran binding protein and others;
pfam00641"
/db_xref="CDD:395516"
Region 1110..1129
/region_name="RanBP2-type Zn finger"
/note="RanBP2-type Zn finger [structural motif]"
/db_xref="CDD:275375"
Region 1153..1170
/region_name="RanBP2-type Zn finger"
/note="RanBP2-type Zn finger [structural motif]"
/db_xref="CDD:275375"
Region 1204..1223
/region_name="RanBP2-type Zn finger"
/note="RanBP2-type Zn finger [structural motif]"
/db_xref="CDD:275375"
CDS 1..1889
/gene="LOC111072471"
/coded_by="XM_022364379.2:1099..6768"
/note="The sequence of the model RefSeq protein was
modified relative to its source genomic sequence to
represent the inferred CDS: deleted 2 bases in 2 codons"
/db_xref="GeneID:111072471"
ORIGIN
1 msdnedsphq nnqtkkqlql qrnqattfst rsggsthplt plqeateaee gaeddsaagt
61 plvsrkslmg rvklrvsnil psswfsptsk aaleaeqeqq eqqqqqqqqq qngtgttgtt
121 sltkrkrgrr rielaepdge dspaggllpd vddgaaargl dyeevaladn iaehdlvaed
181 eqtrrseynv fllrkrraai aadddfdedd ddvgdgdeee eedddgpaqa sisaptkrrr
241 veleisvnlp smrrlplplv sstpaavasg gqlftsgnsq vvegtrshsr gsnpggvaph
301 rrthlnlyhq rqhresgynf fagnetaaea ttgdlpvsir rslnipaieh prsrsfsfgq
361 tqtssnlsam planhkrppl lvgqtatare tcrdvvqsen erierllnic ksnnnisssn
421 nnniikskrg aatatgasga adleselney pegveggdsy pyhhnsnsnl sfygnlqsak
481 siftrgsaqp phhnstcsln slnkrqrfna siygsssals dsrlltrsas asacgsgsts
541 sspfykgqtt fggnsahnri fgqsavgggs ssslamnsgg sspaahqvts avgspanagy
601 ggmkplamqp ssnqpiikqp eitnesvvds mslssttrri lsllesystp lidvkrlgnt
661 lkeqqqlqrs tsnpysrpnr smlhtdqqqq qqnqqqqqpq sllaptmqhi lerrrlhrvs
721 qcskdlllny kpnassaggs tsmalaalpa rhtnnnnnns htnkmrsrls hqsarkepre
781 dtelapepld lptinfpama ntptfdlvik pppptmplva anttadlqmr pkppqtafpm
841 pavnfvcanv nsgaaapata aahaafqpss vsgrgfdfge pipileesar iqggtahqtr
901 itrdfsftep aslerqqqqq qqeslpfmng pttaaaahnp sssqqqvssv ftlgvgvegg
961 fsqqfkksat ewecdvcmir nkselvkcaa cetpkpsktt lpaaapvpat vpftgasgfg
1021 drfkksssaw ecdtcmvsnk neankcvace tprpgaataa sktttttdcf sitnspgcgs
1081 gsgsgfgsgf stsssssgfg qafrpkantw ecqtclvmnq ttavecvacq srnpnasses
1141 ssssstsnpp tnvssstsss snitsfkfgf ppeqqqqkqq qqqtgvkqda gfqhlvaaqk
1201 aaswecetcm amndqslskc ccceqlrpga ddcksssnat hpvptftfgf vpkakeaapv
1261 qpvlsvqpaa vlstsniaap qfsfgfgqsk dvadsknasm ggfkfgapat ttssqeeaks
1321 idlramptat katsttgtet aavvpaaapp sqfsfraptt ttstvlssss dasiapatgt
1381 gtaaaaatvt sqvfsfgaps slpssssavs ssthtsgsns satsvissnv kpmfsfsaav
1441 sasgsatpsg vssstsqqpt vttasvgffg agtttnpggp atttstsfaa tpapalvpaa
1501 asaaaptpaa glfsfgsass assttklaps snsstfffgq tptstaapss nattsifgaa
1561 vtsvasgnnn stsisfssst naastaapaa aaaptpvtfs fgekraasga pansltkpvs
1621 fgwpspsasa spipsngsia patatatdss stttnlptvv ssnsvfgsgf gsafgststa
1681 stpastpaaa tsafggngah pstgfgfagn siasqsspap apssgpapif nnaiapafgg
1741 snggggggfg ggsnataakp afnfggssal sqsagtsgpf nfgggggtga natstkpafn
1801 ftgsatvsaa aatpqatttf nfsassaian plasgdstpn anapfqfsag apapanmfaf
1861 npppagnaaq nsqmvrrkmr apvrrlppr