LOW QUALITY PROTEIN: regulator of nonsense transcripts 2


LOCUS       XP_022219922            1247 aa            linear   INV 14-MAY-2021
            [Drosophila obscura].
ACCESSION   XP_022219922
VERSION     XP_022219922.2
DBLINK      BioProject: PRJNA728747
DBSOURCE    REFSEQ: accession XM_022364230.2
KEYWORDS    RefSeq; corrected model.
SOURCE      Drosophila obscura
  ORGANISM  Drosophila obscura
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024542752.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On May 14, 2021 this sequence version replaced XP_022219922.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Drosophila obscura Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Drosophila obscura"
                     /isolate="BZ-5 IFL"
                     /db_xref="taxon:7282"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="whole fly"
                     /dev_stage="Adult fly"
                     /geo_loc_name="Serbia: Babin Zub"
                     /collection_date="2017"
     Protein         1..1247
                     /product="LOW QUALITY PROTEIN: regulator of nonsense
                     transcripts 2"
                     /calculated_mol_wt=140167
     Region          112..307
                     /region_name="MIF4G"
                     /note="Middle domain of eukaryotic initiation factor 4G
                     (eIF4G); smart00543"
                     /db_xref="CDD:214713"
     Region          532..715
                     /region_name="MIF4G"
                     /note="Middle domain of eukaryotic initiation factor 4G
                     (eIF4G); smart00543"
                     /db_xref="CDD:214713"
     Region          730..922
                     /region_name="MIF4G"
                     /note="Middle domain of eukaryotic initiation factor 4G
                     (eIF4G); smart00543"
                     /db_xref="CDD:214713"
     Region          1042..1198
                     /region_name="Upf2"
                     /note="Up-frameshift suppressor 2; pfam04050"
                     /db_xref="CDD:461146"
     CDS             1..1247
                     /gene="LOC111072391"
                     /coded_by="XM_022364230.2:138..3881"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:111072391"
ORIGIN      
        1 mptnksgptv aerpaeipet attnsshaaa aasatattts eveaeavpea spnddgdgdg
       61 ddaakeaeer eelrlfiqel gekieskrlm rqqnanielp geeffarlds slkkntafvk
      121 klkmftttql epllrelsal nlskyiseic aalaeaklkm ndvpsvvmls srlhatyvdf
      181 dthfleawqk vlnmkgekig npsklrvdlr lfaelissgv iqmkpglall gmvlvqligq
      241 dkdghnnfsi ilsfcrhcge eyaglvpqkm qqlalkydve vpksdflaad kqanlrtmlk
      301 gyfkalckhv laeqtelmnm tknirrtmec kgeissekre kcemmqasfd kllasaqtls
      361 ellaeplpel akeseccspg tvidnmldsa algvldpwgd eetrafytdl pdlrqflpdf
      421 sapkvdletm eepselteea idanldaemd iddppstnsd ppsentaddq pppsstppll
      481 laptgtspnd lkpqkmcsal melgrqqlqs qpptaqtqqq irqqfdtflv nlfncvnkel
      541 idsaaiefll nfntkhqrkk ltrtifsvqr trldilpyls rfmavvhmcn tdvaadlsel
      601 lrkefkwhir kknqlniesk lkivrfigeq vkfglfkkfd algclkmllr dfqhhqiema
      661 cafvevtgvy lyncrdsrll mnvfldqmlr lklatamdsr haaqiesvyy lvkppesskr
      721 esaprpvihe yirhlifeel ckqnvercik mlrridwldp dtsgyaikcl skafllrfpl
      781 ircladlvsg lssyqpravt ividnvfedi ragleihspr maqrriamak ylgemynykl
      841 vesthilntl ysiislgvst dqsvvspldp peslfrlkla cmlldtcgpy ftsqatrkkl
      901 dyflmffqhy ywfkkshpvf crdnessadl fpilvdhtyr dclgavrpkl klytsleqak
      961 esidqlqerl fphlkshasn pnlaslneis eldegptded sgssndqrer qvaglepeqs
     1021 nectenetdv pmgpppppew skedldfeqq yermttdsyq erlkepvkat akdipvpmma
     1081 rlqkksyeqi tagsqiskvs scpdlpprsp apdlpesssg ktaasnaggt ggggggggat
     1141 paaaaavpfv lmvrgnrggk qqfksfvcas dshlainlkv qeqkireeke kvkrltlnit
     1201 erieeedyqe sllppqhrnf tqsyyqkpnr qkfkhqkgap dadlifh