sodium channel protein para isoform X42 [Drosophila obscura].
LOCUS XP_022217221 2104 aa linear INV 14-MAY-2021
ACCESSION XP_022217221
VERSION XP_022217221.2
DBLINK BioProject: PRJNA728747
DBSOURCE REFSEQ: accession XM_022361529.2
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XP_022217221.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..2104
/organism="Drosophila obscura"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
Protein 1..2104
/product="sodium channel protein para isoform X42"
/calculated_mol_wt=235462
Region 152..436
/region_name="Ion_trans"
/note="Ion transport protein; pfam00520"
/db_xref="CDD:459842"
Region 553..719
/region_name="Na_trans_cytopl"
/note="Cytoplasmic domain of voltage-gated Na+ ion
channel; pfam11933"
/db_xref="CDD:463401"
Region 788..999
/region_name="Ion_trans"
/note="Ion transport protein; pfam00520"
/db_xref="CDD:459842"
Region 1025..1244
/region_name="Na_trans_assoc"
/note="Sodium ion transport-associated; pfam06512"
/db_xref="CDD:461936"
Region 1248..1519
/region_name="Ion_trans"
/note="Ion transport protein; pfam00520"
/db_xref="CDD:459842"
Region 1509..1561
/region_name="Na_channel_gate"
/note="Inactivation gate of the voltage-gated sodium
channel alpha subunits; cd13433"
/db_xref="CDD:240441"
Site 1524..1527
/site_type="other"
/note="putative hydrophobic latch"
/db_xref="CDD:240441"
Region 1569..1819
/region_name="Ion_trans"
/note="Ion transport protein; pfam00520"
/db_xref="CDD:459842"
Region 1830..1877
/region_name="GPHH"
/note="Voltage-dependent L-type calcium channel,
IQ-associated; pfam16905"
/db_xref="CDD:465306"
CDS 1..2104
/gene="LOC111070739"
/coded_by="XM_022361529.2:237..6551"
/db_xref="GeneID:111070739"
ORIGIN
1 mtedsdsise eerslfrpft reslvqieqr iaaehekqke lerkraegev pqygrkkkqk
61 eiryddeded egpqpdptle qgvpipvrlq gsfppelast pledidpfys niltfvvvsk
121 gkdifrfsas kamwlldpfn pirrvaiyil vhplfslfii ttilvncilm impttptves
181 teviftgiyt fesavkvmar gfilcpftyl rdawnwldfv vialayvtmg idlgnlaalr
241 tfrvlralkt vaivpglkti vgaviesvkn lrdviiltmf slsvfalmgl qiymgvltqk
301 cikkfpldgs wgnltdenwa yhnsnnsnwy seddgisfpl cgnisgagqc eddyvclqgf
361 gpnpnygyts fdsfgwafls afrlmtqdfw edlyqlvlra agpwhmlffi viiflgsfyl
421 vnlilaivam sydelqkkae eeeaaeeeai reaeeaaaak aakleerana qaqaaadaaa
481 aeeaalhpem aksptyscis yelfvggekg nddnnkekms irsveveses vsviqrqpap
541 ttahqatkvr kvstytirng rgrfgipgsd rkplvlstyq daqqhlpyad dsnavtpmse
601 engaiivpvy ygnlgsrhss ytshqsrisy tshgdllggm avmgvstmtk esklrnrnsr
661 nqsvgatngg ttcldpnhkv ehrdfeigle ctdeagkikh hdnpfiepvq tqtvvdmkdv
721 mvlndiieqa agrhsrasdr gedddedgpt lkdkalealm kgievfcvwd ccwvwlklqe
781 wislivfdpf velfitlciv vntmfmamdh hdmnkemeri lkcgnyffta tfaieatmkl
841 camspkyyfq egwnifdfii valsllelgl egvqglsvlr sfrllrvfkl akswptlnll
901 isimgrtmga lgnltfvlci iififavmgm qlfgknyhdn kdrfpdgdlp rwnftdfmhs
961 fmivfrvlcg ewiesmwdcm hvgdvscipf flatvvignl vvlnlflall lsnfgsssls
1021 aptadndtnk iaeafnrigr fkswvkrnia dcfklirnkl tnqisdqpse hgdnelelgh
1081 deiladglik kgikeatqle vaigdgmeft ihgdmknnkp kkskylnnat dddtasinsy
1141 gshknrpfkd eshkgsaetm egeekrdask edlgideeld eegeleegpl dgdiiihand
1201 edildeypad ccpdsyykkf pilagdddsp fwqgwgnlrl ktfqlienky fetavitmil
1261 msslalaled vhlpqrpilq dilyymdrif tvifflemli kwlalgfkvy ftnawcwldf
1321 vivmvslinf vaslvgaggi qafktmrtlr alrplramsr mqgmrvvvna lvqaipsifn
1381 vllvclifwl ifaimgvqlf agkyfkcedm ngtklsheii pnrnacesen ytwvnsamnf
1441 dhvgnaylcl fqvatfkgwi qimndaidsr evdkqpiret niymylyfvf fiifgsfftl
1501 nlfigviidn fneqkkkagg slemfmtedq kkyynamkkm gskkplkaip rprwrpqaiv
1561 feivtdkkfd ivimlfigln mftmtldryd asdtynavld ylnaifvvif ssecllkifa
1621 lryhyfiepw nlfdvvvvil silglvlsdi iekyfvsptl lrvvrvakvg rvlrlvkgak
1681 girtllfala mslpalfnic lllflvmfif aifgmsffmh vkeksgindv ynfktfgqsm
1741 illfqmstsa gwdgvldaii neeacdppdn dkgypgncgs atvgitflls ylvisflivi
1801 nmyiavilen ysqatedvqe gltdddydmy yeiwqqfdpe gtqyirydql sefldvlepp
1861 lqihkpnkyk iismdipicr gdlmycvdil daltkdffar kgnpieetge igeiaarpdt
1921 egyepvsstl wrqreeycar liqhawrkhk traegggaps daegdgpedg dagggggaal
1981 mlgvldvpda agdaattgsh dgataldpet dpsgvpaaaa vapqpagdgg egpdggatad
2041 phesnvnspt mdgatagspg agsagstgrq tavlvesdgf vtknghkvvi hsrspsitsr
2101 tadv