LOW QUALITY PROTEIN: tyrosine-protein phosphatase 10D [Drosophila
LOCUS XP_022210504 1809 aa linear INV 14-MAY-2021
obscura].
ACCESSION XP_022210504
VERSION XP_022210504.2
DBLINK BioProject: PRJNA728747
DBSOURCE REFSEQ: accession XM_022354812.2
KEYWORDS RefSeq; corrected model.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XP_022210504.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
frameshifts :: corrected 1 indel
##RefSeq-Attributes-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..1809
/organism="Drosophila obscura"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
Protein 1..1809
/product="LOW QUALITY PROTEIN: tyrosine-protein
phosphatase 10D"
/calculated_mol_wt=204105
Region 147..238
/region_name="FN3"
/note="Fibronectin type 3 domain; One of three types of
internal repeats found in the plasma protein fibronectin.
Its tenth fibronectin type III repeat contains an RGD cell
recognition sequence in a flexible loop between 2 strands.
Approximately 2% of all...; cd00063"
/db_xref="CDD:238020"
Site order(147,211,226)
/site_type="active"
/note="Interdomain contacts [active]"
/db_xref="CDD:238020"
Site order(227..228,230..231)
/site_type="active"
/note="Cytokine receptor motif [active]"
/db_xref="CDD:238020"
Site order(240,307,322)
/site_type="active"
/note="Interdomain contacts [active]"
/db_xref="CDD:238020"
Region 243..324
/region_name="fn3"
/note="Fibronectin type III domain; pfam00041"
/db_xref="CDD:394996"
Region 316..>752
/region_name="FN3"
/note="Fibronectin type 3 domain [General function
prediction only]; COG3401"
/db_xref="CDD:442628"
Site order(323..324,326..327)
/site_type="active"
/note="Cytokine receptor motif [active]"
/db_xref="CDD:238020"
Region 834..896
/region_name="FN3"
/note="Fibronectin type 3 domain; One of three types of
internal repeats found in the plasma protein fibronectin.
Its tenth fibronectin type III repeat contains an RGD cell
recognition sequence in a flexible loop between 2 strands.
Approximately 2% of all...; cl21522"
/db_xref="CDD:473895"
Region 912..977
/region_name="fn3"
/note="Fibronectin type III domain; pfam00041"
/db_xref="CDD:394996"
Region 1021..1113
/region_name="FN3"
/note="Fibronectin type 3 domain; One of three types of
internal repeats found in the plasma protein fibronectin.
Its tenth fibronectin type III repeat contains an RGD cell
recognition sequence in a flexible loop between 2 strands.
Approximately 2% of all...; cd00063"
/db_xref="CDD:238020"
Site order(1021,1088,1103)
/site_type="active"
/note="Interdomain contacts [active]"
/db_xref="CDD:238020"
Site order(1104..1105,1107..1108)
/site_type="active"
/note="Cytokine receptor motif [active]"
/db_xref="CDD:238020"
Region 1144..1272
/region_name="PTP_tm"
/note="TM proximal of protein tyrosine phosphatase,
receptor type J; pfam18861"
/db_xref="CDD:465889"
Region 1383..1604
/region_name="R3-PTPc"
/note="catalytic domain of R3 subfamily receptor-type
tyrosine-protein phosphatases and similar proteins;
cd14548"
/db_xref="CDD:350396"
CDS 1..1809
/gene="LOC111066310"
/coded_by="XM_022354812.2:523..5952"
/note="The sequence of the model RefSeq protein was
modified relative to its source genomic sequence to
represent the inferred CDS: deleted 2 bases in 1 codon"
/db_xref="GeneID:111066310"
ORIGIN
1 mdcaaqqqqr rsqpqqqqqe eapaeaeqqt hgrrrrrqqh tqiqpsqphm wivlsiltif
61 wpqyssgadl vinvpnassn dnafyridys ppfgypepnt tipaseigkd ikfsralpgt
121 eynfwlfytn sthqelltwt vnittapdpp aslsvqlrss ksafitwkpp rtgnysgfri
181 kvlgltdlpf nrsyalddre tlqlsakelt pggsyqvqay tiyqgkesva ytsrnfttkp
241 ntpgkfivwf rnettllvlw qppfpagiyt hykvsitpdd aiesvlyver egeppgpaqa
301 afkglvpgre ynisvqtvse detssvptta ryltvpervl nvtfdeahtt tssfrvrwep
361 prtysefdgy qvmlstsrri fnvprtdats vtfdypdile pgrtydvvvk tiadnvnswp
421 atavvtlrpr pvrtlggfld drsnalhisw epaetgkqdg yriryheqtn dsevavasal
481 dtvidtalte ytldslqagr rylvgvqals ngvasnvtym trytrpaapi iqelrsiplg
541 lniswksdvn sqqdryevhy qrngtreert iatnetalti nylhagsgye ikvyaisygi
601 rsephsyfqa vfpkpplnlt lqtvhtnlvv lhwqppegsd fseyvvryrt aaspwqrlan
661 vhesharied mhygeryliq vntisfgves psplelnvtm pphpvsnvvp lvdsrnltle
721 wprpdghidy ytlkwwptde vdrveyknvt qledltspsv ripiedlspg rqyrfevqas
781 sngirsgith lstrtmpliq sdvfisnars sdgggnraka itkgngngng eeetitlsyt
841 ptpasstrfd iyrfsmgdpq ikdkekmand terkltftgl spgrlynvtv wtvsggvasl
901 piqrlyrlhp lpisgleatq vaareislrw tapageftdf elqylsadee apqllqnvtr
961 ltqmtlhglr pyhnytftvv vrsgsssgss tgredglapp pnlmrssapi sasyqtlaav
1021 pgrvdyfqps dvqpaevsfv wlleareqhg pidyfriscq niddaadvva shefpvnath
1081 gridnlvpgn kyifrlqaks algfgaerdh vqvmpilapp vpgpnvtple vgrtsstiei
1141 syrqsyfsna hglvrfytii vaedvgknas glempswhdv qsyavwlpyq aiepynpfgg
1201 gaasnasvvr rsmsmssgsv merftigsan cdkqrtgycn gplragttyr ikvraftddd
1261 kftdtaysvp ittdrndtli vavtmvslvl iaaillvayc qrrchlirra tklsrmqdel
1321 aalpegyvtp nrpihvkdfg ehyrlmsads dfrfseefee lkhvgrdqac sfanlpcnrp
1381 knrftnilpy dhsrfklqpv ddddgsdyin anympghnsp refivtqgpl hstreefwrm
1441 cwesnsraiv mltrcfekgr ekcdqywpvd rvamfygdik vqliidthfr dwsisefmvs
1501 rncesrimrh fhfttwpdfg vpeppqslvr fvrafrdaig tdmrpiivhc sagvgrsgtf
1561 ialdrilqhi hksdyvdifg ivfamrkerv fmvqteqqyv cihqcllavl egkehllads
1621 lelhandgye erpnqqlqqq hqqqqqmkpk mgtlgavmga ktlraslala eeldqelmgk
1681 peeehamaev slsdsinkpn ekadqdaedd eedddddddd ddddddddqq plnnettatl
1741 stassssise dqvdnveqqq qqqhnkqrdq grictksdad tdeddtdede dkedgdgakr
1801 readedgww