Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XP_022210376 595 aa linear INV 14-MAY-2021 ACCESSION XP_022210376 VERSION XP_022210376.1 DBLINK BioProject: PRJNA728747 DBSOURCE REFSEQ: accession XM_022354684.2 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..595 /organism="Drosophila obscura" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" Protein 1..595 /product="transcription factor grauzone" /calculated_mol_wt=68236 Region 2..79 /region_name="zf-AD" /note="Zinc-finger associated domain (zf-AD); smart00868" /db_xref="CDD:214871" Region 291..312 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 321..>376 /region_name="SUF4-like" /note="N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins; cd20908" /db_xref="CDD:411020" Region 321..338 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:411020" Region 321..338 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Site order(323,325,327,329..330,333..334,337,351,353,357..358, 361..362,366,386,388,390,392..393,396..397,400) /site_type="other" /note="putative nucleic acid binding site [nucleotide binding]" /db_xref="CDD:275368" Site order(323,329,336,337,345,352) /site_type="other" /note="putative DNA binding site [nucleotide binding]" /db_xref="CDD:411020" Region <344..528 /region_name="COG5048" /note="FOG: Zn-finger [General function prediction only]" /db_xref="CDD:227381" Region 346..367 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:411020" Region 346..367 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 381..>431 /region_name="SUF4-like" /note="N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins; cd20908" /db_xref="CDD:411020" Region 381..401 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:411020" Region 381..401 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Site order(386,392,400,403,416) /site_type="other" /note="putative DNA binding site [nucleotide binding]" /db_xref="CDD:411020" Region 410..431 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:411020" Region 410..431 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 439..459 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 469..489 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 496..517 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Site order(501,503,505,507..508,511..512,516,530,532,536..537, 540..541,544,558,560,562,564..565,568..569) /site_type="other" /note="putative nucleic acid binding site [nucleotide binding]" /db_xref="CDD:275368" Region 525..545 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 553..571 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" CDS 1..595 /gene="LOC111066236" /coded_by="XM_022354684.2:193..1980" /db_xref="GeneID:111066236" ORIGIN 1 micrlclrsi npsnavflfe tnetmaetil vkmiakflql eitpddsist svcteccehl 61 edfntfwqlv eqkqgtlkke fltvdvdcva mkwtgevdvd vnidelplva vemdekpldm 121 hnlsmlgsvl dvnvdsvevp qappvdikiq qtdylseede hpphldatdd sefeceagpq 181 edtsddeplv klqdklkpkr kshvratktl edscslggqe lnyllgrgdg dgegegskgr 241 rkkapgqrsl ptevqeselq aalerkpkgc sraqlakrye eviasymnad cdlcdfsaky 301 lselkvhfle vhqrefyikc cnkvftrask lmdhirkhvn pklftcsicq ktlnsqdyla 361 thietvhnkv ekidkvlqfp cskcertfss errlanhlak hdtatlehic hichknfanv 421 hrlrrhiqsi hedlhrhvcd icgkkfkfkp sferhlrehq gvvapamqcp vcgvwlkneh 481 slrlhrfthd stntdcphcs ktcnsrtalr ahikyahklt tsfqctycek tfkqqrnlde 541 hlaihtglql yncphcpkec rsrsnmyvhi kqrhaeewlt akmarshnpq fkpht