transcription factor grauzone [Drosophila obscura].
LOCUS XP_022210376 595 aa linear INV 14-MAY-2021
ACCESSION XP_022210376
VERSION XP_022210376.1
DBLINK BioProject: PRJNA728747
DBSOURCE REFSEQ: accession XM_022354684.2
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..595
/organism="Drosophila obscura"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
Protein 1..595
/product="transcription factor grauzone"
/calculated_mol_wt=68236
Region 2..79
/region_name="zf-AD"
/note="Zinc-finger associated domain (zf-AD); smart00868"
/db_xref="CDD:214871"
Region 291..312
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:275368"
Region 321..>376
/region_name="SUF4-like"
/note="N-terminal domain of Oryza sativa transcription
factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
SUF4 (AtSUF4), and similar proteins; cd20908"
/db_xref="CDD:411020"
Region 321..338
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:411020"
Region 321..338
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:275368"
Site order(323,325,327,329..330,333..334,337,351,353,357..358,
361..362,366,386,388,390,392..393,396..397,400)
/site_type="other"
/note="putative nucleic acid binding site [nucleotide
binding]"
/db_xref="CDD:275368"
Site order(323,329,336,337,345,352)
/site_type="other"
/note="putative DNA binding site [nucleotide binding]"
/db_xref="CDD:411020"
Region <344..528
/region_name="COG5048"
/note="FOG: Zn-finger [General function prediction only]"
/db_xref="CDD:227381"
Region 346..367
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:411020"
Region 346..367
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:275368"
Region 381..>431
/region_name="SUF4-like"
/note="N-terminal domain of Oryza sativa transcription
factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
SUF4 (AtSUF4), and similar proteins; cd20908"
/db_xref="CDD:411020"
Region 381..401
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:411020"
Region 381..401
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:275368"
Site order(386,392,400,403,416)
/site_type="other"
/note="putative DNA binding site [nucleotide binding]"
/db_xref="CDD:411020"
Region 410..431
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:411020"
Region 410..431
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:275368"
Region 439..459
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:275368"
Region 469..489
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:275368"
Region 496..517
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:275368"
Site order(501,503,505,507..508,511..512,516,530,532,536..537,
540..541,544,558,560,562,564..565,568..569)
/site_type="other"
/note="putative nucleic acid binding site [nucleotide
binding]"
/db_xref="CDD:275368"
Region 525..545
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:275368"
Region 553..571
/region_name="C2H2 Zn finger"
/note="C2H2 Zn finger [structural motif]"
/db_xref="CDD:275368"
CDS 1..595
/gene="LOC111066236"
/coded_by="XM_022354684.2:193..1980"
/db_xref="GeneID:111066236"
ORIGIN
1 micrlclrsi npsnavflfe tnetmaetil vkmiakflql eitpddsist svcteccehl
61 edfntfwqlv eqkqgtlkke fltvdvdcva mkwtgevdvd vnidelplva vemdekpldm
121 hnlsmlgsvl dvnvdsvevp qappvdikiq qtdylseede hpphldatdd sefeceagpq
181 edtsddeplv klqdklkpkr kshvratktl edscslggqe lnyllgrgdg dgegegskgr
241 rkkapgqrsl ptevqeselq aalerkpkgc sraqlakrye eviasymnad cdlcdfsaky
301 lselkvhfle vhqrefyikc cnkvftrask lmdhirkhvn pklftcsicq ktlnsqdyla
361 thietvhnkv ekidkvlqfp cskcertfss errlanhlak hdtatlehic hichknfanv
421 hrlrrhiqsi hedlhrhvcd icgkkfkfkp sferhlrehq gvvapamqcp vcgvwlkneh
481 slrlhrfthd stntdcphcs ktcnsrtalr ahikyahklt tsfqctycek tfkqqrnlde
541 hlaihtglql yncphcpkec rsrsnmyvhi kqrhaeewlt akmarshnpq fkpht