ceramide synthase 6 [Drosophila takahashii].

LOCUS       XP_017016239             413 aa            linear   INV 09-DEC-2024
ACCESSION   XP_017016239
VERSION     XP_017016239.2
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017160750.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 18, 2021 this sequence version replaced XP_017016239.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..413
                     /product="ceramide synthase 6"
                     /calculated_mol_wt=47070
     Region          75..131
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(75..78,80,97,103,116,118..119,122..123,125..127,
                     129..130)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(76,79,119,122..123,126)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          135..334
                     /region_name="TLC"
                     /note="TRAM, LAG1 and CLN8 homology domains; smart00724"
                     /db_xref="CDD:214789"
     CDS             1..413
                     /gene="schlank"
                     /coded_by="XM_017160750.3:542..1783"
                     /db_xref="GeneID:108070328"
ORIGIN      
        1 mdlinkfsda fwstqiwlpp nttwadiapg srqdvvhany kdliwpipfa avvmlvrytl
       61 erfwispigk slgirssrpk kaanvpilet ayakstrldn kwlaplskqt dmserqierw
      121 wrlrraqdkp stlvkfcent wrciyylysf ifgvivlwdk pwfwdvkscw ygyphqsisn
      181 diwwyymism sfywsltgtq ffdvkrkdfw qmfihhmvtl llmslswvcn lhrvgslvlv
      241 vhdcadifle aakltkyany qklcdaifai ftvvwivtrl gfypriiyss sveaprilpm
      301 fpayyifnsl llmllvlhvi wtymilkivv dslqkglmsg dirssdsedl tdssenarla
      361 ngsarsknks nsgatsggsa agagaggatq rksnnannht teaaggaatt aak