basic helix-loop-helix ARNT-like protein 1 [Drosophila takahashii].

LOCUS       XP_017015989             710 aa            linear   INV 09-DEC-2024
ACCESSION   XP_017015989
VERSION     XP_017015989.2
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017160500.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 18, 2021 this sequence version replaced XP_017015989.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..710
                     /product="basic helix-loop-helix ARNT-like protein 1"
                     /calculated_mol_wt=77321
     Region          34..85
                     /region_name="bHLH_PAS"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain family; cd11391"
                     /db_xref="CDD:381397"
     Site            order(34,37..38,41..42,44..45,49,70..71)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381397"
     Site            order(44,47..48,51..52,54..55,58..60,70..72,75..76,79,
                     82..83,85)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381397"
     Region          138..>187
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cd00130"
                     /db_xref="CDD:238075"
     Region          396..505
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     CDS             1..710
                     /gene="Met"
                     /coded_by="XM_017160500.3:686..2818"
                     /db_xref="GeneID:108070145"
ORIGIN      
        1 maaaetgnts stgsgsgsgs gsgsgsstdp angrearnla ekqrrdklna siqelatmvp
       61 haaessrrld ktavlrfath glrlqyvfgk sasrrrrrps clkgassgls saaaaagdla
      121 npslhltdtl mqlldscflt ltcsgqivlv sssveqllgh cqsdlygqnl lqithpedqa
      181 llrqqliprd ietlfyqqqh qqqqqqhsts tsasasgsdl deeemeteeq hleeqeqddn
      241 pydrrppspr siahlaaide rlradrrcft vrlarastra eatrhyervk idgcfrrsds
      301 sltggaaany pivsqlirrs rnnnmlaaaa avaaeaatts vppqhdaiaq aalhgisgnd
      361 ivlvamarvl reerppeeae galggltiyr qpepyqleyh trhlidgsii dcdqriglva
      421 gymkdevrnl spfcfmhldd vrwvivalrq mydcnsdyge scyrllsrng rfiylhtkgf
      481 leidrgsnkv hsflcvntll deqagrqkvq emkekfstii kaempaqsss pdlpasqapq
      541 qlerivlyli enlqksvdsg esavggqpme slmddgyssp antltleela psptptlalv
      601 ppapssvkss isksvsvvnv taarkfqqdr eqakerqhss sqgvirqlss clsemetasc
      661 tlspasslsa geapdtpdph sntpppppqq pqplharpsv lhrtltstlr