microfibril-associated glycoprotein 4-like [Drosophila takahashii].

LOCUS       XP_017012133             299 aa            linear   INV 09-DEC-2024
ACCESSION   XP_017012133
VERSION     XP_017012133.3
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017156644.3
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XP_017012133.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..299
                     /product="microfibril-associated glycoprotein 4-like"
                     /calculated_mol_wt=34300
     Region          97..297
                     /region_name="FReD"
                     /note="Fibrinogen-related domains (FReDs); C terminal
                     globular domain of fibrinogen. Fibrinogen is involved in
                     blood clotting, being activated by thrombin to assemble
                     into fibrin clots. The N-termini of 2 times 3 chains come
                     together to form a globular...; cd00087"
                     /db_xref="CDD:238040"
     Site            200
                     /site_type="other"
                     /note="gamma-gamma dimer interface [polypeptide binding]"
                     /db_xref="CDD:238040"
     Site            order(229,231,233)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238040"
     Site            order(237,240..241,250..251)
                     /site_type="active"
                     /note="polymerization pocket [active]"
                     /db_xref="CDD:238040"
     CDS             1..299
                     /gene="LOC108067564"
                     /coded_by="XM_017156644.3:1..900"
                     /db_xref="GeneID:108067564"
ORIGIN      
        1 mtdtiakwer elgiakketq ikdsqikeqn klletenykv iklteniesl rnkiknkdak
       61 dsqidglnnq irsnaekitn itdalakcnp qdscpiegps giysmkirgm ntfeapcnsk
      121 gwltiqkrfd gsekfarnwn nfkkgfgnim geffiglerl hvmtearphe lyislgmvng
      181 skayahyddf kiaseeelye lkslgiysgt agdsltyhkn krfstfdrkn dehvhncang
      241 enggwwyksc sqsrlngkfy keghthdnkt ngiswgswhn ydfnysltfv emmirpktl