vacuolar protein sorting-associated protein 4 [Drosophila

LOCUS       XP_017011241             442 aa            linear   INV 09-DEC-2024
            takahashii].
ACCESSION   XP_017011241
VERSION     XP_017011241.1
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017155752.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..442
                     /product="vacuolar protein sorting-associated protein 4"
                     /calculated_mol_wt=49398
     Region          6..69
                     /region_name="MIT_VPS4"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This sub-family of
                     MIT domains is found in intracellular protein transport
                     proteins of the AAA-ATPase family. The molecular function
                     of the MIT domain is unclear; cd02678"
                     /db_xref="CDD:239141"
     Region          126..296
                     /region_name="RecA-like_VPS4"
                     /note="ATPase domain of vacuolar protein
                     sorting-associated protein 4; cd19521"
                     /db_xref="CDD:410929"
     Site            order(127,146,150,153..154,158,162,174..175,179,183,194,
                     196,198..200,203,211,232..233,236,241,243,245..247,
                     249..251,254..255,278,281)
                     /site_type="other"
                     /note="hexamer interface [polypeptide binding]"
                     /db_xref="CDD:410929"
     Site            order(133..135,137,174..180,232,277)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410929"
     Region          323..361
                     /region_name="AAA_lid_3"
                     /note="AAA+ lid domain; pfam17862"
                     /db_xref="CDD:465537"
     Region          379..439
                     /region_name="Vps4_C"
                     /note="Vps4 C terminal oligomerization domain; pfam09336"
                     /db_xref="CDD:462762"
     CDS             1..442
                     /gene="Vps4"
                     /coded_by="XM_017155752.3:166..1494"
                     /db_xref="GeneID:108066946"
ORIGIN      
        1 maagttlqka idlvtkatee drnknyaeal rlyehgveyf lhtikyeaqg ekakdsirak
       61 clqyldraek lkeylkkgkk kplkeggess akddkdkksd sddedgddpe kkklqskled
      121 aiviekpkvq wsdvaglega kealkeavil pikfpqlftg kripwkgill fgppgtgksy
      181 lakavatean rstffsvsss dlmskwlges eklvknlfel arqhkpsiif ideidsmcsa
      241 rsdnendsvr rikteflvqm qgvgndtdgi lvlgatnipw vldsairrrf ekriyiplpe
      301 aharlvmfki hlgntthvlt eqdlkelagk tegysgadis ivvrdalmep vrkvqtathf
      361 krvtgpsptn seeivndllv pcspgdpgav emnwmdvpsd klfeppvtmr dmlkslsrtk
      421 ptvneddlkk lrkftedfgq eg