ubiquitin carboxyl-terminal hydrolase 39 [Drosophila takahashii].

LOCUS       XP_017009853             494 aa            linear   INV 09-DEC-2024
ACCESSION   XP_017009853
VERSION     XP_017009853.1
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017154364.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..494
                     /product="ubiquitin carboxyl-terminal hydrolase 39"
                     /calculated_mol_wt=57347
     Region          39..488
                     /region_name="Peptidase_C19M"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02669"
                     /db_xref="CDD:239134"
     Site            order(163,168,448,466)
                     /site_type="active"
                     /db_xref="CDD:239134"
     CDS             1..494
                     /gene="Usp39"
                     /coded_by="XM_017154364.3:123..1607"
                     /db_xref="GeneID:108066039"
ORIGIN      
        1 maqtqapaak rmklaqkpan pveedetpsv fnpkyrvcpy ldtinrnlld fdfeklcsis
       61 ltrinvyacl vcgkyfqgrg tnthaythsv geahhvflnl htlrfyclpd nyeiidssld
      121 dikyvlnptf trqeisrldq lqpkhsrtvd gvlylpgvvg lnnikandyc nvvlhalshv
      181 gplrdyflre qsyahvkrpp gdsmftlvqr fgelmrkmwn prnfkahvsp hemlqavvlw
      241 sskrfqiteq gdpidflswf lntlhralkg nkqpnssily kiflgemqiy trkippveld
      301 daakaqllat eeykdqveht nfiyltcdlp ppplftdefr eniipqvnly qllgkfngsa
      361 ekeyktykdn fmkrfeitrl pqfiilyikr ftkntfflek nptivnfpik nvdfgdilgm
      421 rqrdkdvkdt kynlvanivh dgdpkkgtyr ahilhkangq wyemqdlhvt eilpqmitlt
      481 esyiqiyerc adas