ras-related protein Rab-40C isoform X2 [Drosophila takahashii].

LOCUS       XP_017005353             255 aa            linear   INV 09-DEC-2024
ACCESSION   XP_017005353
VERSION     XP_017005353.2
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017149864.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 18, 2021 this sequence version replaced XP_017005353.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..255
                     /product="ras-related protein Rab-40C isoform X2"
                     /calculated_mol_wt=28515
     Region          6..174
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            18..25
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(20..26,67,121..122,124,151..153)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            41
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            45..47
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            64..67
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(66..67,83..84)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            121..124
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            151..153
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          182..224
                     /region_name="SOCS"
                     /note="SOCS (suppressors of cytokine signaling) box. The
                     SOCS box is found in the C-terminal region of CIS/SOCS
                     family proteins (in combination with a SH2 domain), ASBs
                     (ankyrin repeat-containing proteins with a SOCS box), SSBs
                     (SPRY domain-containing proteins...; cl02533"
                     /db_xref="CDD:470605"
     Site            order(183..188,194,201,207)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     CDS             1..255
                     /gene="Rab40"
                     /coded_by="XM_017149864.3:253..1020"
                     /db_xref="GeneID:108062967"
ORIGIN      
        1 mgtmtkdydy llkvllvgds dvgkheilsn ledpstespf csgnaykttt illegkrvkl
       61 qlwdtsgqgr fctiirsysr gaqgiilvyd itnkwsfdgi drwlkevdeh apgipkvlvg
      121 nrlhlafkrq vaakqaetya srnnmscfei splcdfnire sfcelarmal hrngmehiwr
      181 snkvltlqel ccrtivrrts vyaidslplp psvkstlksy alttsqcfns ltqssksknr
      241 cktptsgsrn scaia