ras-related protein Rab-40C isoform X1 [Drosophila takahashii].

LOCUS       XP_017005352             265 aa            linear   INV 09-DEC-2024
ACCESSION   XP_017005352
VERSION     XP_017005352.2
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017149863.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 18, 2021 this sequence version replaced XP_017005352.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..265
                     /product="ras-related protein Rab-40C isoform X1"
                     /calculated_mol_wt=29613
     Region          6..184
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            18..25
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(20..26,77,131..132,134,161..163)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            41
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            order(45,56..57)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            74..77
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(76..77,93..94)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            131..134
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            161..163
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          192..234
                     /region_name="SOCS"
                     /note="SOCS (suppressors of cytokine signaling) box. The
                     SOCS box is found in the C-terminal region of CIS/SOCS
                     family proteins (in combination with a SH2 domain), ASBs
                     (ankyrin repeat-containing proteins with a SOCS box), SSBs
                     (SPRY domain-containing proteins...; cl02533"
                     /db_xref="CDD:470605"
     Site            order(193..198,204,211,217)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     CDS             1..265
                     /gene="Rab40"
                     /coded_by="XM_017149863.3:254..1051"
                     /db_xref="GeneID:108062967"
ORIGIN      
        1 mgtmtkdydy llkvllvgds dvgkheilsn ledpstespf csgndctshi lqtvaykttt
       61 illegkrvkl qlwdtsgqgr fctiirsysr gaqgiilvyd itnkwsfdgi drwlkevdeh
      121 apgipkvlvg nrlhlafkrq vaakqaetya srnnmscfei splcdfnire sfcelarmal
      181 hrngmehiwr snkvltlqel ccrtivrrts vyaidslplp psvkstlksy alttsqcfns
      241 ltqssksknr cktptsgsrn scaia