Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XP_017002260 591 aa linear INV 09-DEC-2024 ACCESSION XP_017002260 VERSION XP_017002260.2 DBLINK BioProject: PRJNA1194641 DBSOURCE REFSEQ: accession XM_017146771.3 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XP_017002260.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..591 /organism="Drosophila takahashii" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" Protein 1..591 /product="transcription factor grauzone" /calculated_mol_wt=67343 Region 2..79 /region_name="zf-AD" /note="Zinc-finger associated domain (zf-AD); smart00868" /db_xref="CDD:214871" Region 284..305 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 314..>369 /region_name="SUF4-like" /note="N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins; cd20908" /db_xref="CDD:411020" Region 314..331 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:411020" Region 314..331 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Site order(316,322,329,330,338,345) /site_type="other" /note="putative DNA binding site [nucleotide binding]" /db_xref="CDD:411020" Region 339..360 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:411020" Region 339..360 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 374..394 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Site order(379,381,383,385..386,389..390,393,408,410,414..415, 418..419,423,437,439,441,443..444,447..448,451) /site_type="other" /note="putative nucleic acid binding site [nucleotide binding]" /db_xref="CDD:275368" Region 403..424 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 432..452 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 462..482 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 489..510 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Site order(494,496,498,500..501,504..505,509,523,525,529..530, 533..534,537,551,553,555,557..558,561..562) /site_type="other" /note="putative nucleic acid binding site [nucleotide binding]" /db_xref="CDD:275368" Region 518..538 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" Region 546..564 /region_name="C2H2 Zn finger" /note="C2H2 Zn finger [structural motif]" /db_xref="CDD:275368" CDS 1..591 /gene="LOC108060862" /coded_by="XM_017146771.3:130..1905" /db_xref="GeneID:108060862" ORIGIN 1 micrlclrcl spgsavflfe tddtlaetrl vkmiakflql eilpddgist svctdccehl 61 edfngfwqlv eqkqcslkke fltvdvdcva mkwtggvdvd vnidelplaa gdmdekpldl 121 hnlsllgsvl dvnvdsvevr epgqvkeqlp cgseeeeqdk kprllasdse peamqpeeds 181 sddeplvrlq tkmrpkppkr kakvrtnkae sahslhrele dllddgskrr rrratggtae 241 qraptevqes elqavlerkp kgcsraqlak syeeaiasym sascdlcefs apylselkth 301 fleahqrefy ikccgkiftr asklmdhirk hvnpnlftcs icqkslnsqd ylathietvh 361 nkvaqidkvl kfpcpkcert fsserrlanh lakhdtdqle htceiccksf anihrlrrhi 421 qsihedlhrh vcdicgkkfk fkpsfdrhll ehqgvvapav ecpvcgvwlk nehslrlhrf 481 thdstdtvcp hcgktctsrt alrghvkyah klttnlqctf cektfkqqrn ldehmaihtg 541 lqlyncphcp kecrsrsnmy vhikqrhade wlrakmarsh npqfkpgsgd v