homeobox protein cut isoform X1 [Drosophila takahashii].

LOCUS       XP_017001443            2175 aa            linear   INV 09-DEC-2024
ACCESSION   XP_017001443
VERSION     XP_017001443.2
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017145954.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 18, 2021 this sequence version replaced XP_017001443.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..2175
                     /product="homeobox protein cut isoform X1"
                     /calculated_mol_wt=234270
     Region          880..949
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          1344..1419
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          1617..1692
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          1747..1803
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..2175
                     /gene="ct"
                     /coded_by="XM_017145954.3:1125..7652"
                     /db_xref="GeneID:108060310"
ORIGIN      
        1 mqptlpqaag tadmdltavq sindwffkke qiyllaqfwq qratlaekev ntlkeqlstg
       61 npensdnsdt atvaaatnds eedqqqqqqq qqqqsdsdkl lnssivaaai tlqqqngsnl
      121 lantntpsps ppllsaeqqq qlqsslqqsg ggaclnpklf fnhaqqmmmm eaaaaaaaaa
      181 lqqqqqqqsp lhspatevai paeqpaattg aataaaatpi asgniksssn inhsnntsnn
      241 nshqeqedqe leededeeee dededdeeen asmqsnaddm eldaqqetrt epsattqqqd
      301 ladleeqnkd ageaslnvsn nhttdsnnsc srknnngggn eseqhvansa edddcannnt
      361 ntsnnnntss ttatsntnnn nnnnnsssgn sekrkkknnn nnngqpavll aakdkeikal
      421 ldelqrlral eqthlvqiqr leehlevkrq himrlearld kqqinealae atalaaaaat
      481 nnnnnsqssd nnkqsnkage aatpldasss visigdlpea tktsaavpsa aaaededede
      541 dqamlvdsee aeekpeehqr gdddeeeeee aedreavnat ntttttdsne lkikkeqhsp
      601 ldlnvlspns alataaaaaa aaacandpnk fqalliertk alaaealkng asdaisedah
      661 hhqqqhhqqq qqqhhhqqhh qqqqqhhqqq qqhhhhhhlq nsgsnsnpat nsdlnhhghh
      721 lhhlhhlhhe sssnsstpsv taasgnggsn nagnqatqat aqlaaslast lngaqksllq
      781 edsnglataa amaahahlgp vsgflpglpa fqfaaaqvaa gggdgrvghy rfadselqlp
      841 pgasmagrlg eslipkgdpm eaklqemlry nmdkyanqal dtlhisrrvr ellsvhnigq
      901 rlfakyilgl sqgtvsells kpkpwdklte kgrdsyrkmh awacddnavm llkslipkkd
      961 sglpqyagrg aggaggddsm sedriahils easslmkqts vahrehrelq qerrshgeds
     1021 hsnedskspp qsctspffkv eqqlkqqqhq qqqhltpeqa aaaqqrerer eqrerereqq
     1081 qrlrhedlaq dkmarlyqel iartpretaf psflfspslf ggaagmpgaa gnafpamade
     1141 nmrhvferei aklqqhqqqq qqqqqaaaaq fpnfsslmal qqqvlngaqd lslaaaaaas
     1201 kdiklngqrs slehsagsss scskdgered gyrksegggt pappappaga aplpsggapt
     1261 gapggatsgn saapsplsns ilppalssqg eefaataspl qrmasitnsl itqppvtphh
     1321 stpqrptkav lppitqqqfd mfnnlntedi vrrvkealsq ysisqrlfge svlglsqgsv
     1381 sdllarpkpw hmltqkgrep firmkmfled enavhklvas qykiapeklm rtgsysgspq
     1441 mpqglaskmq avgslpmqkm mselklqepg aaqaqhlmqq mqaaamsaam qqqqqqqvaq
     1501 qhhqqqhlva qqqqqhlaaq qqqqqhlvaq qqqqqqqhaa aaalhhqsml ltspglppqh
     1561 aislppsagn pssnpnpssn pgekkpmlmp vhgtnamrsl hqhmsptvye maaltqdldt
     1621 hdittkikea llannigqki fgeavlglsq gsvsellskp kpwhmlsikg repfirmqlw
     1681 lsdannverl qllknerrea skrrrstgpn qqdnssdtss ndtndfytss pgpgsvgsgv
     1741 ggappskkqr vlfseeqkea lrlafaldpy pnvgtiefla nelglatrti tnwfhnhrmr
     1801 lkqqvphgpa gqdnpipsre stsatpfdpv qfrillqqrl lelhkermgm sgapipyppy
     1861 faaaailgrs lagipgaaaa agaaaaaaav gaatgdelqa lnqafkeqms gldlsmptlk
     1921 rersddyqel dleleggsgh nlsdneseme ggqeedktts dyekalhksa laaaaaymsn
     1981 avrssrrkpa apqwvnpaga vtnpsavvaa vaaaaaaaaa adneriingv cvmqgsgsss
     2041 sveptdsgat neeaeeheha qleidqrfme pevhikqeed ddeeeqptat aensgeense
     2101 lklkvvneek lrmvrvrrls sngggsseem paplapppsa gaatssssga vestscssss
     2161 tpavttaaaa aswny