Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XP_016997606 2222 aa linear INV 09-DEC-2024 takahashii]. ACCESSION XP_016997606 VERSION XP_016997606.2 DBLINK BioProject: PRJNA1194641 DBSOURCE REFSEQ: accession XM_017142117.3 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XP_016997606.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..2222 /organism="Drosophila takahashii" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" Protein 1..2222 /product="E3 ubiquitin-protein ligase Ubr3 isoform X2" /calculated_mol_wt=246666 Region 224..292 /region_name="UBR-box_UBR3" /note="UBR-box found in ubiquitin-protein ligase E3-alpha-3 (UBR3) and similar proteins; cd19673" /db_xref="CDD:439071" Site order(224,240,249,252,258,274,276,288) /site_type="other" /note="Zn binding site [ion binding]" /db_xref="CDD:439071" Region 1362..1478 /region_name="Eisosome1" /note="Eisosome protein 1; pfam12757" /db_xref="CDD:432763" Region <1424..>1492 /region_name="TPH" /note="Trichohyalin-plectin-homology domain; pfam13868" /db_xref="CDD:464007" Region 1612..1662 /region_name="RING-H2_UBR3" /note="RING finger, H2 subclass, found in ubiquitin-protein ligase E3-alpha-3 (UBR3) and similar proteins; cd16483" /db_xref="CDD:438146" Region 1732..2205 /region_name="PRT6_C" /note="Proteolysis_6 C-terminal; pfam18995" /db_xref="CDD:465944" CDS 1..2222 /gene="Ubr3" /coded_by="XM_017142117.3:961..7629" /db_xref="GeneID:108057723" ORIGIN 1 mdeddnlsna disiddeeaa eerpqdaamq qdqqeddess dvdlssvyvl ppivssmpav 61 risggttttt tsaaaapata adnshspfhd wdssvaaaap ppppprgata aaasssesga 121 agasggasgp gaaasdagak psfffgassf slrsrkevaa linteccrgs ptpdldsimd 181 tlfnpgtpid nldniewirw liaggrtpqe fvkivrsydn hakcglvwvp hvvayrcrtc 241 gispcmsicr dcfkkgnhtn hdfnmflsqa ggacdcgdts vmkaegfcsd hginnrvnrd 301 pvpnnllava eaimpkllfr llqhfrehsd talqvhamts ysceefanml idlnnmgeim 361 rkvmtrtlin pevyayfmea pcqdtrngrf lkanrekyed avnrfpnpep pdeyrdlpal 421 gdklvhttll eefifwtfkf efpqtlvcfl lnmlpdqdyk ehltrtfvmh ysripsvlem 481 srdpdtlsnr vvhmsvqlfs neslalkmvn elsllhvmii slklmmskil iqntlhdpsk 541 nfhfvidctr qvmkdhcywp lvsdfnnvls hesvalvflr ddnlidmwfq flqmlqgmnv 601 nvretashve fepnsyyaaf sceleasayp mwsiishlqd gthahlakki inycvttlhe 661 wldsiyfmea rlsmeemmqa sfhfplhryl aafvcqavtk mgislndvlp srpyllpllm 721 ihplrvqsff yeilagkwvr nglqikgqam tyiqanfcns madmdlfflq icatnlpqyf 781 flqntielfd vgqwletapl kqpqkaeqss mlegfltfla tlvtsrtnlg ndeatqciie 841 isallatenk thsqllelmp ersgnvhtkn fetflkklsv ykapssgsen leqglftpid 901 evwekhydpl hvllravhrr dfqssldrft nyvkskekmp asgnlwppfr lpqalpatss 961 fsdpckilns rvfhstilsi ffravhtrdv sehllalavf lleiavetsd dvgsgpgdra 1021 ppalaamves sggpgyhgyg sgrqeppklf qcyptdnlsc nlrhvvkkvs lksrdpqvit 1081 ssyrsnpfys dldfdveadp esqsmrmigh vdsegdeatg gggggggvan lgpgtlsrrn 1141 vsqalvpmrv pgmevalppd lsvvaetgvv irqdsnddel lregdhamdm spaaaldfhf 1201 plqqitlpes gmevairrdl llaetnnmga igggggggga npsattpgva snemfspttp 1261 tgsgmllpfq rvqpvavpss svnmdivpsn algaggsfts gvsgggggtg rrmnyetgga 1321 rkrsvdiaig gsnkdelhld esilslllkl hsqlsgtlds fslsdgeeqs qsgedsssmd 1381 vdcneastss talaergrsr rknyknihvs asrigdgpff ignllrkiak qdeqcalsid 1441 dirarlwpnq rerqaeakar etkekeerrk karerqqkmm qdfankqkqf mqsaaaaass 1501 mdygpededd eellyeeqpr ekeydciicn cttpstesnp iglvvlvess givghrrria 1561 erlplplnve dedrlrhstr laaefgrrte llslkfgdes wylsnnmayd ngvhvqscgh 1621 hvhlscleay lktlyttqrq pvqdrgefyc pvcrqlsnsv lplspqldrp thivrsgnqp 1681 ferlvadltd likenetipp tklteamgha mevmtniaqr kvkyasitfr klfifvtsia 1741 rtnleaeiiq rggslcsana trykpkrdci vpllhvlsvh vrvlvewplw sswaslaglp 1801 vseteplpah clelipslla dpialllkfi llaplhldqd yftcmvkvmy nllyyqivvq 1861 lcvtltdlec dhilkvygss gaesqpesaa gasgssynrr ragsqqqsss qlgkamalvl 1921 sqtnelahlr rdcipstsss aaaaaaagss sasatatsss sasssphevn lksmelqlqs 1981 lclpflrvaa llrqhlyrhe mpeisapgle fvrlvyylel vtdsmdwdcf naskglcfip 2041 gteqtlpqfw cqqlmevrpp adtvrelvli nqhslwqqpr llelpreyer lftyyherpc 2101 lncykvpkes sicllcgtiv clkqnccaen dcceavrhtl scgggigifl vvtstyiivi 2161 rgrraclwgs lylddfdeed rdlkrgkply lsqdrfnlle sqwlshkfah tkhtwvfhrd 2221 ll