RNA-binding protein pno1 [Drosophila takahashii].

LOCUS       XP_016996985             237 aa            linear   INV 09-DEC-2024
ACCESSION   XP_016996985
VERSION     XP_016996985.2
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017141496.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 18, 2021 this sequence version replaced XP_016996985.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..237
                     /product="RNA-binding protein pno1"
                     /calculated_mol_wt=26206
     Region          59..137
                     /region_name="KH-I_PNO1_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in partner of NOB1 (PNO1) and similar proteins;
                     cd22391"
                     /db_xref="CDD:411819"
     Site            order(59,61..62,70..71,73..74,77,81,85,87,89..97,102,104,
                     108,112..113,116,120,130,132..133,135..136)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:411819"
     Site            order(67..72,96,99)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411819"
     Region          139..234
                     /region_name="KH-I_PNO1_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in partner of NOB1 (PNO1) and similar proteins;
                     cd22392"
                     /db_xref="CDD:411820"
     Site            order(139..144,146..147,152..155,162..163,172,174,177,
                     180..181,184..186,197,200,207,211..212,215,234)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:411820"
     Site            order(160,162..163,165..167,169..173,175..177,189,204,
                     216..219,221,223,227)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411820"
     CDS             1..237
                     /gene="l(1)G0004"
                     /coded_by="XM_017141496.3:127..840"
                     /db_xref="GeneID:108057296"
ORIGIN      
        1 meaenikada fepakraakr gatsgdvemq vdeatgiegq slgtsrgsap pkakrarsel
       61 rkvsvpphry sslkehwmki ftpvvehmkl qirfnmkarq velrvgpetp dianlqrgad
      121 fvraflcgfe vddalallrl edlfvesfei kdvktlrgdh qsraigrlag kggrtkftie
      181 nvtktrivla dskihilgsy qniqlarrav cnlilgspps kvygnlrava srlserm