Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XP_016996149 1383 aa linear INV 09-DEC-2024 takahashii]. ACCESSION XP_016996149 VERSION XP_016996149.2 DBLINK BioProject: PRJNA1194641 DBSOURCE REFSEQ: accession XM_017140660.3 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XP_016996149.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..1383 /organism="Drosophila takahashii" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" Protein 1..1383 /product="DNA-directed RNA polymerase III subunit RPC1" /calculated_mol_wt=154236 Region 24..890 /region_name="RNAP_III_RPC1_N" /note="Largest subunit (RPC1) of eukaryotic RNA polymerase III (RNAP III), N-terminal domain; cd02583" /db_xref="CDD:259847" Site order(67,70,77,80) /site_type="other" /note="Zn-binding [ion binding]" /db_xref="CDD:259847" Site order(348,353,360,366) /site_type="active" /note="putative active site region [active]" /db_xref="CDD:259847" Region 1014..1354 /region_name="RNAP_III_Rpc1_C" /note="Largest subunit (Rpc1) of Eukaryotic RNA polymerase III (RNAP III), C-terminal domain; cd02736" /db_xref="CDD:132723" Site order(1016..1017,1021,1024,1351,1354) /site_type="other" /note="Rpb1 (Rpc1) - Rpb6 interaction site [polypeptide binding]" /db_xref="CDD:132723" Site order(1021..1082,1087..1101,1197..1208,1217..1270, 1273..1305,1308) /site_type="active" /note="cleft [active]" /db_xref="CDD:132723" Site order(1025,1028,1323,1333..1335,1341..1342,1344,1346,1351) /site_type="other" /note="Rpb1 (Rpc1) - Rpb2 (Rpc2) interaction site [polypeptide binding]" /db_xref="CDD:132723" Site order(1070,1299,1316..1317,1320) /site_type="DNA binding" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:132723" Site order(1231,1237..1238,1240,1250..1256,1258,1278, 1289..1290,1292) /site_type="other" /note="Rpb1 (Rpc1) - Rpb5 interaction site [polypeptide binding]" /db_xref="CDD:132723" Site 1308..1349 /site_type="active" /note="clamp [active]" /db_xref="CDD:132723" CDS 1..1383 /gene="Polr3A" /coded_by="XM_017140660.3:99..4250" /db_xref="GeneID:108056724" ORIGIN 1 mpkeqfrasa lnkkishvqf gisgadeiqq ealvriiskn lyqaqrqpvp ygvldrrmgi 61 stkdavcetc gqglnecigh fgyldlalpv fhighfrsti nilqmickac ahvmlkpedr 121 qlyekklhnp nfsylgkkal hvqmlakakk vtkcphcgsp nggvkkgpgl lkilhdpykg 181 rkvdslftsn mnemlrstea nrdlntalgs nyssaeeltp lmvldlfeqi pqgdvallgm 241 cshdahpkhl ivtrvfvppa cirpsvlsev kagtteddlt mkqseillin dviqrhmatg 301 gkielihedw dflqlhvaly fhseisgipi nmapkkttrg ivqrlkgkqg rfrcnlsgkr 361 vdfsgrtvis pdpnlminqv gvpvrvakil typervnpan mrhmrelvrn gpslhpgany 421 vqqrgssfkk ylaygnrekv aqelkcgdiv erhlrdediv lfnrqpslhk msimchrakv 481 qpqrtfrfne cactpynadf dgdemnlhlp qteearaeal ilmgnqsnlv tpkngeilia 541 atqdfitggy lltqkevflt keeamqlaac flanedstmh iklpppallk prrlwtgkqm 601 fsllmrpnde sqvrlnmvnk grnytrnmdl csndswihir nselmcgvmd katmgsgtkq 661 cifylllrdf gelhatkamw rlariasyfl qnrgfsfgis dvtpskkllq hkeqllangy 721 skcneyieml kagtlqcqpg ctpeetlesv mlrelsaire qaaktcfael hptnsalima 781 lsgskgsnin isqmiacvgq qaisgkrvpn gfenralphf erhsaipaar gfvqnsfysg 841 ltptefffht magreglvdt avktaetgyl qrrlvkcled lvvhydgtvr navnemvdti 901 yggdgldpva metrnkpvdl vhqydnlraq hprgddrpfl gaeipealee vfktpefies 961 redfkvdvrn higivskrie qlqkrydkcm nlchqieclt egqllqfvrr indrynravt 1021 epgtavgaia aqsigepgtq mtlktfhfag vasmnitqgv priveiinat ktistpiita 1081 elenshsmef arqvkariek ttlaelssyv evvcgpyscy laigidmari kllglhinld 1141 tivfsilksr mrvkpsqvea vaklsrivvr veatrtatin aelarlalsl qnvvvaglpn 1201 inraviavdd arqpptyklc iegyglrdvi atygvvgkrt rsnniceiyq tlgieaarti 1261 imseitevme ghgmsvdwrh imllasqmta rgevlgitrh glakmresvf nlasfektad 1321 hlfdaayygq tdaingvser iilgmpagig tgifkllqhh edkqvppieq tisgslnlvp 1381 tpa