Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

chromobox protein homolog 3 isoform X3 [Drosophila takahashii].


LOCUS       XP_016996138             325 aa            linear   INV 09-DEC-2024
ACCESSION   XP_016996138
VERSION     XP_016996138.2
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017140649.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 18, 2021 this sequence version replaced XP_016996138.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..325
                     /product="chromobox protein homolog 3 isoform X3"
                     /calculated_mol_wt=35460
     Region          137..180
                     /region_name="CD_CSD"
                     /note="CHROMO (CHRromatin Organization Modifier) domains
                     and chromo shadow domains; cd00024"
                     /db_xref="CDD:349274"
     Region          226..274
                     /region_name="CD_CSD"
                     /note="CHROMO (CHRromatin Organization Modifier) domains
                     and chromo shadow domains; cd00024"
                     /db_xref="CDD:349274"
     Site            order(226..230,245,247..250,254,256..259,261..262,268,
                     271..272)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349274"
     CDS             1..325
                     /gene="LOC108056719"
                     /coded_by="XM_017140649.3:204..1181"
                     /db_xref="GeneID:108056719"
ORIGIN      
        1 mvklgkkkav eelgrkklrn gaapdgeend gdtgssasrs tsvssskkpl nkrkarpivr
       61 sesedsddlp lnngnnnkvs tsssgggssa pkkrklgrpk snaaakngkk alanedseed
      121 avldeqeaev eyeveaivgq ktvkgatyfq vrwkgytkae dtwmleadls cdylleqfra
      181 kqeakpkgkt akgakkaggg grgrppgggg gtkksaaapt dpekewvver ivdfvddaeg
      241 glyrirwkgf gakddtwepe snlsceglie kfkrdlvtqk nvetkelres pkktkrlvne
      301 yyprtnihnr iersskraaa knrcv