protein crooked neck [Drosophila takahashii].

LOCUS       XP_016995753             696 aa            linear   INV 09-DEC-2024
ACCESSION   XP_016995753
VERSION     XP_016995753.2
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017140264.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 18, 2021 this sequence version replaced XP_016995753.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..696
                     /product="protein crooked neck"
                     /calculated_mol_wt=83596
     Region          <94..202
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          109..139
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          144..172
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <180..539
                     /region_name="RNA14"
                     /note="Pre-mRNA 3'-end processing (cleavage and
                     polyadenylation) factor [RNA processing and modification];
                     COG5107"
                     /db_xref="CDD:227438"
     Region          191..222
                     /region_name="HAT"
                     /note="HAT (Half-A-TPR) repeat; pfam02184"
                     /db_xref="CDD:111114"
     Region          473..503
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          508..538
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..696
                     /gene="crn"
                     /coded_by="XM_017140264.3:112..2202"
                     /db_xref="GeneID:108056463"
ORIGIN      
        1 merpqkmpkv akvknkapae vqitaeqllr eakerdleil ppppkqkisd paeladyqqr
       61 krktfednlr knrmvvshwi kyaqweeqqq eiqrarsiwe raldnehrnv tlwlkyaeme
      121 mknkqvnhar nlwdravtim prvnqfwyky tymeemlenv agarqvferw mewqpeeqaw
      181 qtyvnfelry keidrarevy erfvyvhpdv knwikfarfe eshgfihgsr rvferaveff
      241 gdeyieerlf iafarfeegq kehdrariiy kyaldhlake rtqelfkayt ihekkygdra
      301 giedvivskr kyqyeqevaa nptnydawfd ylrlieaege rdqiretyer aisnvppane
      361 knfwrryiyl winyalyeel eaedaertrq iyktclelip hkqftfsklw llyaqfeirc
      421 kelqrarkal glaigmcprd klfrgyidle iqlrefercr llyekflefg pencvtwmkf
      481 aelenllgdt eraraifela vqqsrldmpe llwkayidfe valgetelar qlyerllert
      541 qhvkvwmsfa kfemglshgd sgqdaelnvr larriyeran emlrqlgdke srvllleawr
      601 dferdaadav alqrvmdkmp rrikkrqkiv sdegveegwe evfdyifped emarpnlkll
      661 aaakmwkkqk dvteeeepvp vpaadpgqse ttaggd