homeobox protein extradenticle [Drosophila takahashii].

LOCUS       XP_016995291             376 aa            linear   INV 09-DEC-2024
ACCESSION   XP_016995291
VERSION     XP_016995291.1
DBLINK      BioProject: PRJNA1194641
DBSOURCE    REFSEQ: accession XM_017139802.3
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Drosophila takahashii"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     Protein         1..376
                     /product="homeobox protein extradenticle"
                     /calculated_mol_wt=41591
     Region          42..237
                     /region_name="PBC"
                     /note="PBC domain; pfam03792"
                     /db_xref="CDD:461052"
     Region          239..299
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(239..243,245,265,271,284,286..287,290..291,293..295,
                     297..298)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(241,244,287,290..291,294)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..376
                     /gene="exd"
                     /coded_by="XM_017139802.3:174..1304"
                     /db_xref="GeneID:108056118"
ORIGIN      
        1 medpnrmlah tggmmapqgy glsgqddgqn tgsenevrkq kdigeilqqi msiseqslde
       61 aqarkhtlnc hrmkpalfsv lceikektvl sirntqeeep pdpqlmrldn mliaegvagp
      121 ekggggaaaa saaaasqggs lsidgadnai ehsdyrakla qirqiyhqel ekyeqacnef
      181 tthvmnllre qsrtrpitpk eiermvqiih kkfssiqmql kqstceavmi lrsrfldarr
      241 krrnfskqas eilneyfysh lsnpypseea keelarkcgi tvsqvsnwfg nkrirykkni
      301 gkaqeeanly aakkaagasp ysmagppsgt ttpmmspapp qdsmgypmgs ggydqqqpyd
      361 nsmggydpnl hqdlsp